-- dump date 20140620_072331 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 760011000001 SEQ_END SEQ_END NC_015436.1 2227296 2227296 DR NC_015436.1; contig end 2227296..2227296 Sphaerochaeta coccoides DSM 17374 YP_004410625.1 CDS Spico_0001 NC_015436.1 113 1525 D COGs: COG0593 ATPase involved in DNA replication initiation; HAMAP: Chromosomal replication control, initiator DnaA; InterPro IPR001957:IPR013317:IPR013159:IPR003593; KEGG: ssm:Spirs_0001 chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda); Chromosomal replication initiator, DnaA C-terminal; SMART: Chromosomal replication initiator, DnaA C-terminal; ATPase, AAA+ type, core; SPTR: Chromosomal replication initiator protein DnaA; TIGRFAM: Chromosomal replication control, initiator DnaA; IMG reference gene:2503956265; PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA; chromosome replication initiator DnaA 113..1525 Sphaerochaeta coccoides DSM 17374 10496200 YP_004410626.1 CDS Spico_0002 NC_015436.1 1780 2895 D COGs: COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); InterPro IPR001001:IPR022634:IPR022637:IPR022635; KEGG: ssm:Spirs_0003 DNA polymerase III, beta subunit; PFAM: DNA polymerase III, beta chain, central; DNA polymerase III, beta chain, N-terminal; DNA polymerase III, beta chain, C-terminal; PRIAM: DNA-directed DNA polymerase; SMART: DNA polymerase III, beta chain; SPTR: DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta chain; IMG reference gene:2503956266; PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit; DNA polymerase III subunit beta 1780..2895 Sphaerochaeta coccoides DSM 17374 10494277 YP_004410627.1 CDS Spico_0003 NC_015436.1 2895 3974 D COGs: COG1195 Recombinational DNA repair ATPase (RecF pathway); HAMAP: DNA-binding, RecF; InterPro IPR001238:IPR003395; KEGG: ssm:Spirs_0004 DNA replication and repair protein RecF; PFAM: RecF/RecN/SMC; SPTR: DNA replication and repair protein recF; TIGRFAM: DNA-binding, RecF; IMG reference gene:2503956267; PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein; DNA replication and repair protein RecF 2895..3974 Sphaerochaeta coccoides DSM 17374 10494278 YP_004410628.1 CDS Spico_0004 NC_015436.1 3971 4300 D InterPro IPR007922; KEGG: ssm:Spirs_0005 protein of unknown function DUF721; PFAM: Protein of unknown function DUF721/UPF0232; SPTR: uncharacterized protein; IMG reference gene:2503956268; PFAM: Protein of unknown function (DUF721); hypothetical protein 3971..4300 Sphaerochaeta coccoides DSM 17374 10494279 YP_004410629.1 CDS Spico_0005 NC_015436.1 4444 4611 D HAMAP: Ribosomal protein L34; InterPro IPR000271; KEGG: ssm:Spirs_0006 ribosomal protein L34; PFAM: Ribosomal protein L34; SPTR: 50S ribosomal protein L34; TIGRFAM: Ribosomal protein L34; IMG reference gene:2503956269; PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; 50S ribosomal protein L34 4444..4611 Sphaerochaeta coccoides DSM 17374 10494280 YP_004410630.1 CDS Spico_0006 NC_015436.1 4592 4942 D HAMAP: Ribonuclease P; InterPro IPR000100; KEGG: ssm:Spirs_0007 ribonuclease P protein component; PFAM: Ribonuclease P; SPTR: Ribonuclease P protein component; TIGRFAM: Ribonuclease P; IMG reference gene:2503956270; PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial; Ribonuclease P protein component 4592..4942 Sphaerochaeta coccoides DSM 17374 10494281 YP_004410631.1 CDS Spico_0007 NC_015436.1 5038 6852 D COGs: COG0706 Preprotein translocase subunit YidC; HAMAP: Membrane insertion protein, OxaA/YidC, bacterial; InterPro IPR019998:IPR001708; KEGG: ssm:Spirs_0008 membrane protein insertase, YidC/Oxa1 family; PFAM: Membrane insertion protein, OxaA/YidC; SPTR: uncharacterized protein; TIGRFAM: Membrane insertion protein, OxaA/YidC; Membrane insertion protein, OxaA/YidC, bacterial; IMG reference gene:2503956271; PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain; membrane protein insertase, YidC/Oxa1 family, N-terminal domain; membrane protein OxaA 5038..6852 Sphaerochaeta coccoides DSM 17374 10494282 YP_004410632.1 CDS Spico_0008 NC_015436.1 6904 7611 D COGs: COG1847 RNA-binding protein; InterPro IPR001374; KEGG: ssm:Spirs_0009 single-stranded nucleic acid binding R3H domain protein; PFAM: Single-stranded nucleic acid binding R3H; SMART: Single-stranded nucleic acid binding R3H; SPTR: Protein jag; IMG reference gene:2503956272; PFAM: R3H domain; single-stranded nucleic acid binding R3H domain-containing protein 6904..7611 Sphaerochaeta coccoides DSM 17374 10494283 YP_004410633.1 CDS Spico_0009 NC_015436.1 7893 8837 D COGs: COG0169 Shikimate 5-dehydrogenase; KEGG: art:Arth_1802 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956273; hypothetical protein 7893..8837 Sphaerochaeta coccoides DSM 17374 10494284 YP_004410634.1 CDS Spico_0010 NC_015436.1 8880 9458 D COGs: COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzyme; InterPro IPR010551; KEGG: art:Arth_1801 glucose-6-phosphate isomerase; PFAM: Glucose-6-phosphate isomerase, prokaryote; PRIAM: Glucose-6-phosphate isomerase; SPTR: Glucose-6-phosphate isomerase; IMG reference gene:2503956274; PFAM: Glucose-6-phosphate isomerase (GPI); glucose-6-phosphate isomerase 8880..9458 Sphaerochaeta coccoides DSM 17374 10494285 YP_004410635.1 CDS Spico_0011 NC_015436.1 9533 10429 D COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; KEGG: art:Arth_1808 Zn-dependent hydrolases of the beta-lactamase fold-like protein; SPTR: Zn-dependent hydrolases of the beta-lactamase fold-like protein; IMG reference gene:2503956275; Zn-dependent hydrolase of the beta-lactamase fold-like protein 9533..10429 Sphaerochaeta coccoides DSM 17374 10494286 YP_004410636.1 CDS Spico_0012 NC_015436.1 10437 11204 D COGs: COG2188 Transcriptional regulators; InterPro IPR000524:IPR011663; KEGG: tna:CTN_0371 transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; SMART: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; SPTR: Transcriptional regulator, GntR family; IMG reference gene:2503956276; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain; GntR family transcriptional regulator 10437..11204 Sphaerochaeta coccoides DSM 17374 10494287 YP_004410637.1 CDS Spico_0013 NC_015436.1 11610 13475 D COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterPro IPR002078:IPR002197:IPR003593; KEGG: dma:DMR_16710 fis family transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core; SPTR: Sigma-54 interaction domain family protein; IMG reference gene:2503956277; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; Fis family transcriptional regulator 11610..13475 Sphaerochaeta coccoides DSM 17374 10494288 YP_004410638.1 CDS Spico_0014 NC_015436.1 13724 14755 D COGs: COG1879 ABC-type sugar transport system periplasmic component; KEGG: tle:Tlet_0182 periplasmic binding protein/LacI transcriptional regulator; SPTR: Periplasmic binding protein/LacI transcriptional regulator; IMG reference gene:2503956278; PFAM: family; periplasmic binding protein/LacI transcriptional regulator 13724..14755 Sphaerochaeta coccoides DSM 17374 10494289 YP_004410639.1 CDS Spico_0015 NC_015436.1 14856 16349 D COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: csh:Closa_1201 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; IMG reference gene:2503956279; PFAM: ABC transporter; monosaccharide-transporting ATPase 14856..16349 Sphaerochaeta coccoides DSM 17374 10494290 YP_004410640.1 CDS Spico_0016 NC_015436.1 16392 17339 D COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: tle:Tlet_0185 monosaccharide-transporting ATPase; PFAM: ABC transporter permease; SPTR: Monosaccharide-transporting ATPase; IMG reference gene:2503956280; PFAM: Branched-chain amino acid transport system / permease component; monosaccharide ABC transporter membrane protein, CUT2 family 16392..17339 Sphaerochaeta coccoides DSM 17374 10494291 YP_004410641.1 CDS Spico_0017 NC_015436.1 17397 18896 D COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484:IPR018485; KEGG: bth:BT_4423 xylulose kinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; PRIAM: Xylulokinase; SPTR: Xylulokinase; IMG reference gene:2503956281; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; Xylulokinase 17397..18896 Sphaerochaeta coccoides DSM 17374 10494292 YP_004410642.1 CDS Spico_0018 NC_015436.1 18965 20515 D COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484:IPR018485; KEGG: bth:BT_4423 xylulose kinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; SPTR: Xylulokinase; IMG reference gene:2503956282; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; Carbohydrate kinase, FGGY 18965..20515 Sphaerochaeta coccoides DSM 17374 10494293 YP_004410643.1 CDS Spico_0019 NC_015436.1 20502 20891 D KEGG: car:cauri_0369 DNA-directed RNA polymerase subunit beta'; SPTR: DNA-directed RNA polymerase subunit beta'; IMG reference gene:2503956283; hypothetical protein 20502..20891 Sphaerochaeta coccoides DSM 17374 10494294 YP_004410644.1 CDS Spico_0020 NC_015436.1 20895 21908 D COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR023210; KEGG: hoh:Hoch_6537 aldo/keto reductase; PFAM: NADP-dependent oxidoreductase domain; PRIAM: Aryl-alcohol dehydrogenase (NADP(+)); SPTR: Aldo/keto reductase; IMG reference gene:2503956284; PFAM: Aldo/keto reductase; aryl-alcohol dehydrogenase 20895..21908 Sphaerochaeta coccoides DSM 17374 10494295 YP_004410645.1 CDS Spico_0021 NC_015436.1 21940 22899 D COGs: COG0524 Sugar kinase ribokinase; InterPro IPR011877:IPR011611; KEGG: csh:Closa_1899 ribokinase; PFAM: Carbohydrate/purine kinase; PRIAM: Ribokinase; SPTR: uncharacterized protein; TIGRFAM: Ribokinase, bacterial; IMG reference gene:2503956285; PFAM: pfkB family carbohydrate kinase; TIGRFAM: ribokinase; ribokinase 21940..22899 Sphaerochaeta coccoides DSM 17374 10494296 YP_004410646.1 CDS Spico_0022 NC_015436.1 23153 23926 D COGs: COG2188 Transcriptional regulators; InterPro IPR000524:IPR011663; KEGG: lac:LBA0393 transcriptional regulator; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; SMART: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; SPTR: uncharacterized protein; IMG reference gene:2503956286; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain; GntR family transcriptional regulator 23153..23926 Sphaerochaeta coccoides DSM 17374 10494297 YP_004410647.1 CDS Spico_0023 NC_015436.1 24285 25244 D COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140; KEGG: tpd:Teth39_2074 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; PRIAM: Phosphoglycerate dehydrogenase; SPTR: uncharacterized protein; IMG reference gene:2503956287; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; Phosphoglycerate dehydrogenase 24285..25244 Sphaerochaeta coccoides DSM 17374 10494298 YP_004410648.1 CDS Spico_0024 NC_015436.1 25409 26557 R COGs: COG0192 S-adenosylmethionine synthetase; HAMAP: S-adenosylmethionine synthetase; InterPro IPR002133:IPR022628:IPR022629:IPR022630; KEGG: sta:STHERM_c00130 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase, C-terminal; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal; PRIAM: Methionine adenosyltransferase; SPTR: S-adenosylmethionine synthetase; TIGRFAM: S-adenosylmethionine synthetase; IMG reference gene:2503956288; PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain; TIGRFAM: S-adenosylmethionine synthetase; methionine adenosyltransferase complement(25409..26557) Sphaerochaeta coccoides DSM 17374 10494299 YP_004410649.1 CDS Spico_0025 NC_015436.1 26706 27776 D COGs: COG0182 translation initiation factor 2B subunit eIF-2B alpha/beta/delta family; HAMAP: translation initiation factor, aIF-2BI/5-methylthioribose-1-phosphate isomerase; InterPro IPR005251:IPR011559:IPR000649; KEGG: cpy:Cphy_2033 aIF-2BI family translation initiation factor; PFAM: Initiation factor 2B-related; PRIAM: S-methyl-5-thioribose-1-phosphate isomerase; SPTR: Methylthioribose-1-phosphate isomerase; TIGRFAM: translation initiation factor, aIF-2BI/5-methylthioribose-1-phosphate isomerase; Initiation factor 2B alpha/beta/delta; IMG reference gene:2503956289; PFAM: Initiation factor 2 subunit family; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized proteins; S-methyl-5-thioribose-1-phosphate isomerase; methylthioribose-1-phosphate isomerase 26706..27776 Sphaerochaeta coccoides DSM 17374 10494300 YP_004410650.1 CDS Spico_0026 NC_015436.1 27858 28874 R COGs: COG0524 Sugar kinase ribokinase; InterPro IPR011611; KEGG: ssm:Spirs_4279 PfkB domain protein; PFAM: Carbohydrate/purine kinase; SPTR: Glr0791 protein; IMG reference gene:2503956290; PFAM: pfkB family carbohydrate kinase; PfkB domain-containing protein complement(27858..28874) Sphaerochaeta coccoides DSM 17374 10494301 YP_004410651.1 CDS Spico_0027 NC_015436.1 29013 30314 D COGs: COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase; HAMAP: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; InterPro IPR005750:IPR001986; KEGG: sta:STHERM_c00510 hypothetical protein; PFAM: Enolpyruvate transferase domain; PRIAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; SPTR: uncharacterized protein; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; IMG reference gene:2503956291; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 29013..30314 Sphaerochaeta coccoides DSM 17374 10494302 YP_004410652.1 CDS Spico_0028 NC_015436.1 30546 30671 R IMG reference gene:2503956292; hypothetical protein complement(30546..30671) Sphaerochaeta coccoides DSM 17374 10494303 YP_004410653.1 CDS Spico_0029 NC_015436.1 30652 31839 R COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR002078:IPR003593; KEGG: dds:Ddes_2345 sigma54 specific transcriptional regulator, fis family; PFAM: RNA polymerase sigma factor 54, interaction; SMART: ATPase, AAA+ type, core; SPTR: Sigma54 specific transcriptional regulator, Fis family; IMG reference gene:2503956293; PFAM: Sigma-54 interaction domain; sigma 54 interacting domain-containing protein complement(30652..31839) Sphaerochaeta coccoides DSM 17374 10494304 YP_004410654.1 CDS Spico_0030 NC_015436.1 32249 33667 D KEGG: tva:TVAG_082020 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956294; PFAM: Peptidase M28; hypothetical protein 32249..33667 Sphaerochaeta coccoides DSM 17374 10494305 YP_004410655.1 CDS Spico_0031 NC_015436.1 33645 34259 R COGs: COG1739 conserved hypothetical protein; InterPro IPR001498; KEGG: tde:TDE1321 hypothetical protein; PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; SPTR: uncharacterized protein; IMG reference gene:2503956295; PFAM: Uncharacterized protein family UPF0029; Domain of unknown function (DUF1949); TIGRFAM: uncharacterized protein, YigZ family; hypothetical protein complement(33645..34259) Sphaerochaeta coccoides DSM 17374 10494306 YP_004410656.1 CDS Spico_0032 NC_015436.1 34272 35276 R InterPro IPR000086; KEGG: ssm:Spirs_0099 NUDIX hydrolase; PFAM: NUDIX hydrolase domain; SPTR: MutT family protein, 78-dihydro-8-oxoguanine triphosphatase (8-oxo-dGTPase); IMG reference gene:2503956296; PFAM: NUDIX domain; NUDIX hydrolase complement(34272..35276) Sphaerochaeta coccoides DSM 17374 10494307 YP_004410657.1 CDS Spico_0033 NC_015436.1 35488 36480 D KEGG: mpd:MCP_1774 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956297; hypothetical protein 35488..36480 Sphaerochaeta coccoides DSM 17374 10494308 YP_004410658.1 CDS Spico_0034 NC_015436.1 36499 37230 D COGs: COG0206 Cell division GTPase; InterPro IPR003008; KEGG: cth:Cthe_0445 cell division protein FtsZ; PFAM: Tubulin/FtsZ, GTPase domain; SMART: Tubulin/FtsZ, GTPase domain; SPTR: Cell division protein ftsZ; IMG reference gene:2503956298; PFAM: Tubulin/FtsZ family, GTPase domain; TIGRFAM: cell division protein FtsZ; tubulin 36499..37230 Sphaerochaeta coccoides DSM 17374 10494309 YP_004410659.1 CDS Spico_0035 NC_015436.1 37265 37594 D KEGG: pop:POPTR_247422 hypothetical protein; SPTR: Chaperone protein dnaJ; IMG reference gene:2503956299; hypothetical protein 37265..37594 Sphaerochaeta coccoides DSM 17374 10494310 YP_004410660.1 CDS Spico_0036 NC_015436.1 37744 38415 D COGs: COG0274 Deoxyribose-phosphate aldolase; HAMAP: Deoxyribose-phosphate aldolase, type 1; InterPro IPR011343:IPR022979:IPR002915; KEGG: gwc:GWCH70_2432 deoxyribose-phosphate aldolase; PFAM: Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; PRIAM: Deoxyribose-phosphate aldolase; SPTR: Deoxyribose-phosphate aldolase; TIGRFAM: Deoxyribose-phosphate aldolase; IMG reference gene:2503956300; PFAM: DeoC/LacD family aldolase; TIGRFAM: deoxyribose-phosphate aldolase; Deoxyribose-phosphate aldolase 37744..38415 Sphaerochaeta coccoides DSM 17374 10494311 YP_004410661.1 CDS Spico_0037 NC_015436.1 38402 39556 D COGs: COG1435 Thymidine kinase; InterPro IPR001267; KEGG: ssm:Spirs_0100 thymidine kinase; PFAM: Thymidine kinase; SPTR: Thymidine kinase; IMG reference gene:2503956301; PFAM: Thymidine kinase; thymidine kinase 38402..39556 Sphaerochaeta coccoides DSM 17374 10494312 YP_004410662.1 CDS Spico_0038 NC_015436.1 39654 40535 R COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: sta:STHERM_c04340 xylose isomerase domain-containing protein TIM barrel; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel; IMG reference gene:2503956302; PFAM: Xylose isomerase-like TIM barrel; xylose isomerase domain-containing protein complement(39654..40535) Sphaerochaeta coccoides DSM 17374 10494313 YP_004410663.1 CDS Spico_0039 NC_015436.1 40581 41960 D COGs: COG5434 Endopygalactorunase; InterPro IPR000743:IPR006626; KEGG: sta:STHERM_c04310 hypothetical protein; PFAM: Glycoside hydrolase, family 28; PRIAM: Polygalacturonase; SPTR: uncharacterized protein; IMG reference gene:2503956303; PFAM: Glycosyl hydrolases family 28; Polygalacturonase 40581..41960 Sphaerochaeta coccoides DSM 17374 10494314 YP_004410664.1 CDS Spico_0040 NC_015436.1 41957 42175 D IMG reference gene:2503956304; hypothetical protein 41957..42175 Sphaerochaeta coccoides DSM 17374 10494315 YP_004410665.1 CDS Spico_0041 NC_015436.1 42092 43054 R COGs: COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; InterPro IPR000887; KEGG: bpb:bpr_I0931 2-keto-3-deoxygluconate 6-phosphate aldolase/2-keto-4-hydroxyglutarate aldolase; PFAM: KDPG/KHG aldolase; PRIAM: 2-dehydro-3-deoxy-phosphogluconate aldolase; SPTR: Entner-Doudoroff aldolase; TIGRFAM: KDPG/KHG aldolase; IMG reference gene:2503956305; PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase complement(42092..43054) Sphaerochaeta coccoides DSM 17374 10494316 YP_004410666.1 CDS Spico_0042 NC_015436.1 43292 44332 D COGs: COG0524 Sugar kinase ribokinase; InterPro IPR011611; KEGG: ssm:Spirs_3585 PfkB domain protein; PFAM: Carbohydrate/purine kinase; SPTR: KHG/KDPG family aldolase/carbohydrate kinase, PfkB family; IMG reference gene:2503956306; PFAM: pfkB family carbohydrate kinase; PfkB domain-containing protein 43292..44332 Sphaerochaeta coccoides DSM 17374 10494317 YP_004410667.1 CDS Spico_0043 NC_015436.1 44435 45442 R KEGG: bth:BT_3630 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956307; hypothetical protein complement(44435..45442) Sphaerochaeta coccoides DSM 17374 10494318 YP_004410668.1 CDS Spico_0044 NC_015436.1 45646 46137 R COGs: COG0350 Methylated DNA-protein cysteine methyltransferase; InterPro IPR014048:IPR008332; KEGG: aoe:Clos_0936 methylated-DNA--protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; Methylguanine DNA methyltransferase, ribonuclease-like; SPTR: Methylated-DNA-protein-cysteine methyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; IMG reference gene:2503956308; PFAM: 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain; 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase; methylated-DNA--protein-cysteine methyltransferase complement(45646..46137) Sphaerochaeta coccoides DSM 17374 10494319 YP_004410669.1 CDS Spico_0045 NC_015436.1 46181 46966 R COGs: COG1414 Transcriptional regulator; InterPro IPR005471:IPR014757; KEGG: etr:ETAE_1567 pectin degradation repressor; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal; SPTR: Pectin degradation repressor; IMG reference gene:2503956309; PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator; IclR family transcriptional regulator complement(46181..46966) Sphaerochaeta coccoides DSM 17374 10494320 YP_004410670.1 CDS Spico_0046 NC_015436.1 46969 48390 R COGs: COG1904 Glucuronate isomerase; HAMAP: Uronate isomerase; InterPro IPR003766; KEGG: ttm:Tthe_2404 glucuronate isomerase; PFAM: Uronate isomerase; PRIAM: Glucuronate isomerase; SPTR: Uronate isomerase; IMG reference gene:2503956310; PFAM: Glucuronate isomerase; D-glucuronate isomerase complement(46969..48390) Sphaerochaeta coccoides DSM 17374 10494321 YP_004410671.1 CDS Spico_0047 NC_015436.1 48387 49934 R COGs: COG2721 Altronate dehydratase; InterPro IPR013974:IPR007392; KEGG: str:Sterm_0691 altronate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase, C-terminal; SAF domain; PRIAM: Altronate dehydratase; SMART: SAF domain; SPTR: Altronate dehydratase; IMG reference gene:2503956311; PFAM: SAF domain; D-galactarate dehydratase / Altronate hydrolase, C terminus; D-altronate dehydratase complement(48387..49934) Sphaerochaeta coccoides DSM 17374 10494322 YP_004410672.1 CDS Spico_0048 NC_015436.1 49944 51437 R COGs: COG0246 Mannitol-1-phosphate/altronate dehydrogenase; InterPro IPR013131:IPR013118; KEGG: amt:Amet_0555 altronate oxidoreductase; PFAM: Mannitol dehydrogenase, C-terminal; Mannitol dehydrogenase, N-terminal; PRIAM: Tagaturonate reductase; SPTR: Mannitol dehydrogenase, C-terminal domain; IMG reference gene:2503956312; PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain; tagaturonate reductase complement(49944..51437) Sphaerochaeta coccoides DSM 17374 10494323 YP_004410673.1 CDS Spico_0049 NC_015436.1 51491 52468 R COGs: COG0385 Na+-dependent transporter; InterPro IPR002657; KEGG: bao:BAMF_0163 sodium dependent transporter; PFAM: Bile acid:sodium symporter; SPTR: Bile acid:sodium symporter; IMG reference gene:2503956313; PFAM: Sodium Bile acid symporter family; bile acid:sodium symporter complement(51491..52468) Sphaerochaeta coccoides DSM 17374 10494324 YP_004410674.1 CDS Spico_0050 NC_015436.1 52734 53255 R KEGG: bmq:BMQ_1790 secreted protein; SPTR: secreted protein; IMG reference gene:2503956314; hypothetical protein complement(52734..53255) Sphaerochaeta coccoides DSM 17374 10494325 YP_004410675.1 CDS Spico_0051 NC_015436.1 53462 55645 R COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR011110:IPR000408; KEGG: aeh:Mlg_2688 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; Two component regulator propeller; SPTR: Alpha-tubulin suppressor and related RCC1 domain-containing protein-like protein; IMG reference gene:2503956315; PFAM: Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 complement(53462..55645) Sphaerochaeta coccoides DSM 17374 10494326 YP_004410676.1 CDS Spico_0052 NC_015436.1 56113 58554 R COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR011110:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Listeria/Bacterioides repeat; Two component regulator propeller; Regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; IMG reference gene:2503956316; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; hypothetical protein complement(56113..58554) Sphaerochaeta coccoides DSM 17374 10494327 YP_004410677.1 CDS Spico_0053 NC_015436.1 58891 59022 D IMG reference gene:2503956317; hypothetical protein 58891..59022 Sphaerochaeta coccoides DSM 17374 10494328 YP_004410678.1 CDS Spico_0054 NC_015436.1 58960 61344 R COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR011110:IPR000408; KEGG: dal:Dalk_3426 regulator of chromosome condensation RCC1; PFAM: Listeria/Bacterioides repeat; Two component regulator propeller; Regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; IMG reference gene:2503956318; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; hypothetical protein complement(58960..61344) Sphaerochaeta coccoides DSM 17374 10494329 YP_004410679.1 CDS Spico_0055 NC_015436.1 61810 65058 D COGs: COG1609 Transcriptional regulators; InterPro IPR001761:IPR000005:IPR018060; KEGG: cag:Cagg_2054 two component transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; Periplasmic binding protein/LacI transcriptional regulator; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Two component transcriptional regulator, AraC family; IMG reference gene:2503956319; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; family; AraC family transcriptional regulator 61810..65058 Sphaerochaeta coccoides DSM 17374 10494330 YP_004410680.1 CDS Spico_0056 NC_015436.1 65211 66215 D COGs: COG4209 ABC-type polysaccharide transport system permease component; InterPro IPR000515; KEGG: mrb:Mrub_0281 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503956320; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 1 65211..66215 Sphaerochaeta coccoides DSM 17374 10494331 YP_004410681.1 CDS Spico_0057 NC_015436.1 66226 67170 D COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: mrb:Mrub_0280 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503956321; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 66226..67170 Sphaerochaeta coccoides DSM 17374 10494332 YP_004410682.1 CDS Spico_0058 NC_015436.1 67248 68819 D COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: mrb:Mrub_0279 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein family 1; IMG reference gene:2503956322; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein 67248..68819 Sphaerochaeta coccoides DSM 17374 10494333 YP_004410683.1 CDS Spico_0059 NC_015436.1 68932 70047 D COGs: COG4225 unsaturated glucuronyl hydrolase involved in regulation of surface properties and related protein; InterPro IPR010905; KEGG: rmr:Rmar_2470 glycosyl hydrolase 88; PFAM: Glycosyl hydrolase, family 88; SPTR: Glycosyl hydrolase 88; IMG reference gene:2503956323; PFAM: Glycosyl Hydrolase 88; glycosyl hydrolase 88 68932..70047 Sphaerochaeta coccoides DSM 17374 10494334 YP_004410684.1 CDS Spico_0060 NC_015436.1 70283 72487 R COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR011110:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; Two component regulator propeller; SPTR: uncharacterized protein; IMG reference gene:2503956324; PFAM: Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 complement(70283..72487) Sphaerochaeta coccoides DSM 17374 10494335 YP_004410685.1 CDS Spico_0061 NC_015436.1 72886 75375 R COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Listeria/Bacterioides repeat; Regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; IMG reference gene:2503956325; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; hypothetical protein complement(72886..75375) Sphaerochaeta coccoides DSM 17374 10494336 YP_004410686.1 CDS Spico_0062 NC_015436.1 75898 76971 D COGs: COG1744 Uncharacterized ABC-type transport system periplasmic component/surface lipoprotein; InterPro IPR003760; KEGG: tde:TDE1950 membrane lipoprotein TmpC, PFAM: Basic membrane lipoprotein; SPTR: Membrane lipoprotein tmpc; IMG reference gene:2503956326; PFAM: Basic membrane protein; nucleoside-binding protein 75898..76971 Sphaerochaeta coccoides DSM 17374 10494337 YP_004410687.1 CDS Spico_0063 NC_015436.1 77093 78613 D COGs: COG3845 ABC-type uncharacterized transport systems ATPase components; InterPro IPR003439:IPR003593; KEGG: tde:TDE1949 ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; IMG reference gene:2503956327; PFAM: ABC transporter; nucleoside ABC transporter ATP-binding protein 77093..78613 Sphaerochaeta coccoides DSM 17374 10494338 YP_004410688.1 CDS Spico_0064 NC_015436.1 78610 79725 D COGs: COG4603 ABC-type uncharacterized transport system permease component; InterPro IPR001851; KEGG: tde:TDE1948 ABC transporter, permease; PFAM: ABC transporter permease; SPTR: ABC transporter, permease; IMG reference gene:2503956328; PFAM: Branched-chain amino acid transport system / permease component; nucleoside ABC transporter membrane protein 78610..79725 Sphaerochaeta coccoides DSM 17374 10494339 YP_004410689.1 CDS Spico_0065 NC_015436.1 79727 80659 D COGs: COG1079 ABC-type transport system permease component; InterPro IPR001851; KEGG: tde:TDE1947 ABC transporter, permease; PFAM: ABC transporter permease; SPTR: ABC transporter, permease; IMG reference gene:2503956329; PFAM: Branched-chain amino acid transport system / permease component; nucleoside ABC transporter membrane protein 79727..80659 Sphaerochaeta coccoides DSM 17374 10494340 YP_004410690.1 CDS Spico_0066 NC_015436.1 80853 81683 D COGs: COG0005 Purine nucleoside phosphorylase; InterPro IPR011268:IPR011270:IPR000845; KEGG: ssm:Spirs_4139 purine nucleoside phosphorylase I, inosine and guanosine-specific; PFAM: Nucleoside phosphorylase domain; PRIAM: Purine-nucleoside phosphorylase; SPTR: Purine nucleoside phosphorylase I, inosine and guanosine-specific; TIGRFAM: Inosine guanosine/xanthosine phosphorylase; Purine nucleoside phosphorylase I, inosine/guanosine-specific; IMG reference gene:2503956330; PFAM: Phosphorylase superfamily; TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine guanosine and xanthosine phosphorylase; inosine guanosine and xanthosine phosphorylase 80853..81683 Sphaerochaeta coccoides DSM 17374 10494341 YP_004410691.1 CDS Spico_0067 NC_015436.1 81671 82159 D COGs: COG3542 conserved hypothetical protein; InterPro IPR009327; KEGG: sco:SCO4051 hypothetical protein; PFAM: Protein of unknown function DUF985; SPTR: uncharacterized protein; IMG reference gene:2503956331; PFAM: Cupin superfamily (DUF985); hypothetical protein 81671..82159 Sphaerochaeta coccoides DSM 17374 10494342 YP_004410692.1 CDS Spico_0068 NC_015436.1 82159 82902 D COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198:IPR020842; KEGG: ssm:Spirs_3584 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SMART: Polyketide synthase/Fatty acid synthase, KR; SPTR: Short-chain dehydrogenase/reductase SDR; IMG reference gene:2503956332; PFAM: short chain dehydrogenase; 3-oxoacyl-ACP reductase 82159..82902 Sphaerochaeta coccoides DSM 17374 10494343 YP_004410693.1 CDS Spico_0069 NC_015436.1 82910 83599 D COGs: COG2129 phosphoesterase related to the Icc protein; InterPro IPR004843; KEGG: sta:STHERM_c06590 Ser/Thr protein phosphatase; PFAM: Metallo-dependent phosphatase; SPTR: Metallophosphoesterase; IMG reference gene:2503956333; PFAM: Calcineurin-like phosphoesterase; metallophosphoesterase 82910..83599 Sphaerochaeta coccoides DSM 17374 10494344 YP_004410694.1 CDS Spico_0070 NC_015436.1 83592 84503 D KEGG: ssm:Spirs_2366 hypothetical protein; SPTR: Transcriptional regulator; IMG reference gene:2503956334; hypothetical protein 83592..84503 Sphaerochaeta coccoides DSM 17374 10494345 YP_004410695.1 CDS Spico_0071 NC_015436.1 84507 85103 R KEGG: cdf:CD1458 flavoprotein; SPTR: Probable flavoprotein; IMG reference gene:2503956335; PFAM: NADPH-dependent FMN reductase; hypothetical protein complement(84507..85103) Sphaerochaeta coccoides DSM 17374 10494346 YP_004410696.1 CDS Spico_0072 NC_015436.1 85182 85964 R COGs: COG1119 ABC-type molybdenum transport system ATPase component/photorepair protein PhrA; InterPro IPR003439:IPR003593; KEGG: mma:MM_0570 ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; IMG reference gene:2503956336; PFAM: ABC transporter; ABC transporter complement(85182..85964) Sphaerochaeta coccoides DSM 17374 10494347 YP_004410697.1 CDS Spico_0073 NC_015436.1 85969 86733 R COGs: COG2186 Transcriptional regulators; InterPro IPR000524; KEGG: ssm:Spirs_1347 GntR domain protein; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; SPTR: Transcriptional regulator; IMG reference gene:2503956337; PFAM: Bacterial regulatory proteins, gntR family; FCD domain; GntR family transcriptional regulator complement(85969..86733) Sphaerochaeta coccoides DSM 17374 10494348 YP_004410698.1 CDS Spico_0074 NC_015436.1 86850 86960 R IMG reference gene:2503956338; hypothetical protein complement(86850..86960) Sphaerochaeta coccoides DSM 17374 10494349 YP_004410699.1 CDS Spico_0075 NC_015436.1 87066 87803 R KEGG: tgu:100225112 similar to ARID4B variant protein; SPTR: Type I secretion outer membrane protein, TolC family; IMG reference gene:2503956339; hypothetical protein complement(87066..87803) Sphaerochaeta coccoides DSM 17374 10494350 YP_004410700.1 CDS Spico_0076 NC_015436.1 88129 89343 D COGs: COG1760 L-serine deaminase; InterPro IPR005131:IPR005130; KEGG: bfs:BF1216 L-serine dehydratase; PFAM: Serine dehydratase-like, alpha subunit; Serine dehydratase beta chain; PRIAM: L-serine ammonia-lyase; SPTR: L-serine dehydratase; IMG reference gene:2503956340; PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, single chain form; L-serine ammonia-lyase 88129..89343 Sphaerochaeta coccoides DSM 17374 10494351 YP_004410701.1 CDS Spico_0077 NC_015436.1 89440 90462 R COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: ssm:Spirs_0788 transcriptional regulator, LacI family; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI; SPTR: Transcriptional regulator, LacI family; IMG reference gene:2503956341; PFAM: Bacterial regulatory proteins, lacI family; family; LacI family transcriptional regulator complement(89440..90462) Sphaerochaeta coccoides DSM 17374 10494352 YP_004410702.1 CDS Spico_0078 NC_015436.1 90767 91720 R COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR001761; KEGG: ssm:Spirs_1666 periplasmic binding protein/LacI transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; SPTR: D-ribose-binding periplasmic protein; IMG reference gene:2503956342; PFAM: family; periplasmic binding protein/LacI transcriptional regulator complement(90767..91720) Sphaerochaeta coccoides DSM 17374 10494353 YP_004410703.1 CDS Spico_0079 NC_015436.1 91792 92781 R COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: ssm:Spirs_1665 inner-membrane translocator; PFAM: ABC transporter permease; SPTR: Ribose ABC transporter (Permease); IMG reference gene:2503956343; PFAM: Branched-chain amino acid transport system / permease component; monosaccharide ABC transporter membrane protein, CUT2 family complement(91792..92781) Sphaerochaeta coccoides DSM 17374 10494354 YP_004410704.1 CDS Spico_0080 NC_015436.1 92830 93828 R COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: ssm:Spirs_1664 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; PRIAM: Inositol 2-dehydrogenase; SPTR: Myo-inositol 2-dehydrogenase; IMG reference gene:2503956344; PFAM: Oxidoreductase, NAD-binding Rossmann fold; Oxidoreductase, C-terminal alpha/beta domain; Inositol 2-dehydrogenase complement(92830..93828) Sphaerochaeta coccoides DSM 17374 10494355 YP_004410705.1 CDS Spico_0081 NC_015436.1 93868 95370 R COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: ssm:Spirs_1663 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Ribose import ATP-binding protein RbsA; IMG reference gene:2503956345; PFAM: ABC transporter; monosaccharide ABC transporter ATP-binding protein, CUT2 family complement(93868..95370) Sphaerochaeta coccoides DSM 17374 10494356 YP_004410706.1 CDS Spico_0082 NC_015436.1 95755 96795 D COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: kol:Kole_0987 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; PRIAM: Inositol 2-dehydrogenase; SPTR: Oxidoreductase domain protein; IMG reference gene:2503956346; PFAM: Oxidoreductase, NAD-binding Rossmann fold; Oxidoreductase, C-terminal alpha/beta domain; myo-inositol 2-dehydrogenase 95755..96795 Sphaerochaeta coccoides DSM 17374 10494357 YP_004410707.1 CDS Spico_0083 NC_015436.1 96792 97604 D COGs: COG3718 Uncharacterized protein involved in inositol metabolism; KEGG: kol:Kole_0990 myo-inositol catabolism IolB domain protein; SPTR: Myo-inositol catabolism IolB domain protein; IMG reference gene:2503956347; PFAM: KduI/IolB family; myo-inositol catabolism IolB domain-containing protein 96792..97604 Sphaerochaeta coccoides DSM 17374 10494358 YP_004410708.1 CDS Spico_0084 NC_015436.1 97627 99492 D COGs: COG3962 Acetolactate synthase; InterPro IPR012001:IPR012000:IPR011766; KEGG: ssm:Spirs_2987 thiamine pyrophosphate protein domain protein TPP-binding protein; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; PRIAM: Acetolactate synthase; SPTR: Thiamine pyrophosphate protein central region; IMG reference gene:2503956348; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase 97627..99492 Sphaerochaeta coccoides DSM 17374 10494359 YP_004410709.1 CDS Spico_0085 NC_015436.1 99519 100412 D COGs: COG1082 Sugar phosphate isomerase/epimerase; HAMAP: Inosose dehydratase; InterPro IPR012307; KEGG: str:Sterm_4013 myo-inosose-2 dehydratase; PFAM: Xylose isomerase, TIM barrel domain; PRIAM: Myo-inosose-2 dehydratase; SPTR: Myo-inosose-2 dehydratase; IMG reference gene:2503956349; PFAM: Xylose isomerase-like TIM barrel; 2-keto-myo-inositol dehydratase 99519..100412 Sphaerochaeta coccoides DSM 17374 10494360 YP_004410710.1 CDS Spico_0086 NC_015436.1 100458 101492 D COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterPro IPR006436:IPR005106:IPR020829:IPR020828; KEGG: ssm:Spirs_0990 glyceraldehyde-3-phosphate dehydrogenase, type II; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Aspartate/homoserine dehydrogenase, NAD-binding; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (NAD(P)(+)) (phosphorylating); SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; SPTR: Glyceraldehyde-3-phosphate dehydrogenase, type II; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type II; IMG reference gene:2503956350; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type II; glyceraldehyde-3-phosphate dehydrogenase 100458..101492 Sphaerochaeta coccoides DSM 17374 10494361 YP_004410711.1 CDS Spico_0087 NC_015436.1 101477 102781 D COGs: COG0126 3-phosphoglycerate kinase; InterPro IPR001576; KEGG: ssm:Spirs_0989 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; PRIAM: Phosphoglycerate kinase; SPTR: Phosphoglycerate kinase; IMG reference gene:2503956351; PFAM: Phosphoglycerate kinase; phosphoglycerate kinase 101477..102781 Sphaerochaeta coccoides DSM 17374 10494362 YP_004410712.1 CDS Spico_0088 NC_015436.1 102778 104061 D COGs: COG3875 conserved hypothetical protein; InterPro IPR018657; KEGG: ssm:Spirs_0988 protein of unknown function DUF2088; PFAM: Protein of unknown function DUF2088; SPTR: General glycosylation pathway protein; IMG reference gene:2503956352; PFAM: NNMT/PNMT/TEMT family; Uncharacterized conserved protein (DUF2088); hypothetical protein 102778..104061 Sphaerochaeta coccoides DSM 17374 10494363 YP_004410713.1 CDS Spico_0089 NC_015436.1 104177 106708 R COGs: COG0495 Leucyl-tRNA synthetase; InterPro IPR002302:IPR015413:IPR013155; KEGG: ssm:Spirs_0283 leucyl-tRNA synthetase; PFAM: Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding; Aminoacyl-tRNA synthetase, class I (M); PRIAM: Leucine--tRNA ligase; SPTR: Leucyl-tRNA synthetase; TIGRFAM: Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial; IMG reference gene:2503956353; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family; leucyl-tRNA synthetase complement(104177..106708) Sphaerochaeta coccoides DSM 17374 10494364 YP_004410714.1 CDS Spico_0090 NC_015436.1 107021 108073 R COGs: COG3177 conserved hypothetical protein; InterPro IPR003812; KEGG: afn:Acfer_1163 filamentation induced by cAMP protein Fic; PFAM: Filamentation induced by cAMP/death on curing-related; SPTR: uncharacterized protein; IMG reference gene:2503956354; PFAM: Fic/DOC family; Fic family protein complement(107021..108073) Sphaerochaeta coccoides DSM 17374 10494365 YP_004410715.1 CDS Spico_0091 NC_015436.1 108285 109073 D COGs: COG2116 Formate/nitrite family of transporter; InterPro IPR000292; KEGG: str:Sterm_3165 formate/nitrite transporter; PFAM: Formate/nitrite transporter; SPTR: Formate/nitrite transporter; IMG reference gene:2503956355; PFAM: Formate/nitrite transporter; TIGRFAM: formate/nitrite transporter; formate/nitrite transporter 108285..109073 Sphaerochaeta coccoides DSM 17374 10494366 YP_004410716.1 CDS Spico_0092 NC_015436.1 109089 109709 R COGs: COG0293 23S rRNA methylase; HAMAP: Ribosomal RNA large subunit methyltransferase E; InterPro IPR015507:IPR002877; KEGG: ssm:Spirs_0297 ribosomal RNA methyltransferase RrmJ/FtsJ; PFAM: Ribosomal RNA methyltransferase RrmJ/FtsJ; SPTR: Ribosomal RNA large subunit methyltransferase E; IMG reference gene:2503956356; PFAM: FtsJ-like methyltransferase; TIGRFAM: cell division protein FtsJ; ribosomal RNA large subunit methyltransferase E complement(109089..109709) Sphaerochaeta coccoides DSM 17374 10494367 YP_004410717.1 CDS Spico_0093 NC_015436.1 109717 111039 R COGs: COG0523 GTPase (G3E family); InterPro IPR003495:IPR011629; KEGG: bur:Bcep18194_A3246 cobalamin synthesis protein/P47K; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; SMART: Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; SPTR: Cobalamin synthesis protein/P47K; IMG reference gene:2503956357; PFAM: CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain; cobalamin synthesis protein P47K complement(109717..111039) Sphaerochaeta coccoides DSM 17374 10494368 YP_004410718.1 CDS Spico_0094 NC_015436.1 111323 112264 D COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: eat:EAT1b_0550 glucokinase, ROK family; PFAM: ROK; PRIAM: Glucokinase; SPTR: Glucokinase, ROK family; IMG reference gene:2503956358; PFAM: ROK family; TIGRFAM: ROK family protein ( glucokinase); glucokinase 111323..112264 Sphaerochaeta coccoides DSM 17374 10494369 YP_004410719.1 CDS Spico_0095 NC_015436.1 112270 114663 D COGs: COG1882 Pyruvate-formate lyase; InterPro IPR010098:IPR004184:IPR001150; KEGG: cbe:Cbei_0705 pyruvate formate-lyase; PFAM: Pyruvate formate-lyase, PFL; Formate C-acetyltransferase glycine radical; PRIAM: Formate C-acetyltransferase; SPTR: Pyruvate formate-lyase; TIGRFAM: Pyruvate formate-lyase; IMG reference gene:2503956359; PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: pyruvate formate-lyase; pyruvate formate-lyase 112270..114663 Sphaerochaeta coccoides DSM 17374 10494370 YP_004410720.1 CDS Spico_0096 NC_015436.1 114663 115406 D COGs: COG1349 Transcriptional regulators of sugar metabolism; InterPro IPR001034:IPR014036; KEGG: cbl:CLK_0642 HTH-type transcriptional regulator YciT; PFAM: HTH transcriptional regulator, DeoR; HTH transcriptional regulator, DeoR N-terminal; SMART: HTH transcriptional regulator, DeoR N-terminal; SPTR: Transcriptional regulator, DeoR family; IMG reference gene:2503956360; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain; DeoR family transcriptional regulator 114663..115406 Sphaerochaeta coccoides DSM 17374 10494371 YP_004410721.1 CDS Spico_0097 NC_015436.1 115669 116640 D COGs: COG1879 ABC-type sugar transport system periplasmic component; KEGG: pin:Ping_2790 bifunctional carbohydrate binding and transport protein; SPTR: Bifunctional carbohydrate binding and transport protein; IMG reference gene:2503956361; bifunctional carbohydrate binding and transport protein 115669..116640 Sphaerochaeta coccoides DSM 17374 10494372 YP_004410722.1 CDS Spico_0098 NC_015436.1 116941 118419 D COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: dtu:Dtur_1644 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; IMG reference gene:2503956362; PFAM: ABC transporter; monosaccharide-transporting ATPase 116941..118419 Sphaerochaeta coccoides DSM 17374 10494373 YP_004410723.1 CDS Spico_0099 NC_015436.1 118432 119439 D COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: cbk:CLL_A1530 ribose transport system permease RbsC; PFAM: ABC transporter permease; SPTR: Ribose transport system permease RbsC; IMG reference gene:2503956363; PFAM: Branched-chain amino acid transport system / permease component; inner-membrane translocator 118432..119439 Sphaerochaeta coccoides DSM 17374 10494374 YP_004410724.1 CDS Spico_0100 NC_015436.1 119455 120462 D COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: pmu:PM0154 ribose ABC transporter permease; PFAM: ABC transporter permease; SPTR: RbsC; IMG reference gene:2503956364; PFAM: Branched-chain amino acid transport system / permease component; inner-membrane translocator 119455..120462 Sphaerochaeta coccoides DSM 17374 10494375 YP_004410725.1 CDS Spico_0101 NC_015436.1 120632 121639 D COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: tit:Thit_2113 transcriptional regulator, LacI family; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI; SPTR: Transcriptional regulator, LacI family; IMG reference gene:2503956365; PFAM: Bacterial regulatory proteins, lacI family; family; LacI family transcriptional regulator 120632..121639 Sphaerochaeta coccoides DSM 17374 10494376 YP_004410726.1 CDS Spico_0102 NC_015436.1 121705 122808 D COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: pjd:Pjdr2_4722 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Oxidoreductase domain protein; manually curated; IMG reference gene:2503956366; PFAM: Oxidoreductase, NAD-binding Rossmann fold; Oxidoreductase, C-terminal alpha/beta domain; oxidoreductase domain-containing protein 121705..122808 Sphaerochaeta coccoides DSM 17374 10494377 YP_004410727.1 CDS Spico_0103 NC_015436.1 122828 124609 R KEGG: cel:T01G9.5 defective MEIosis family member (mei-1); SPTR: Meiotic spindle formation protein mei-1; IMG reference gene:2503956367; hypothetical protein complement(122828..124609) Sphaerochaeta coccoides DSM 17374 10494378 YP_004410728.1 CDS Spico_0104 NC_015436.1 124615 125508 R COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR012839:IPR007197:IPR001450; KEGG: clj:CLJU_c25970 pyruvate formate-lyase activating enzyme; PFAM: Radical SAM; 4Fe-4S binding domain; PRIAM: [Formate-C-acetyltransferase]-activating enzyme; SPTR: uncharacterized protein; TIGRFAM: Glycyl radical enzyme-activating; IMG reference gene:2503956368; PFAM: Radical SAM superfamily; TIGRFAM: glycyl-radical enzyme activating protein family; glycyl-radical enzyme activating protein family complement(124615..125508) Sphaerochaeta coccoides DSM 17374 10494379 YP_004410729.1 CDS Spico_0105 NC_015436.1 125505 127862 R COGs: COG1882 Pyruvate-formate lyase; InterPro IPR010098:IPR004184:IPR001150; KEGG: clj:CLJU_c25980 pyruvate formate-lyase; PFAM: Pyruvate formate-lyase, PFL; Formate C-acetyltransferase glycine radical; PRIAM: Formate C-acetyltransferase; SPTR: uncharacterized protein; TIGRFAM: Pyruvate formate-lyase; IMG reference gene:2503956369; PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: pyruvate formate-lyase; pyruvate formate-lyase complement(125505..127862) Sphaerochaeta coccoides DSM 17374 10494380 YP_004410730.1 CDS Spico_0106 NC_015436.1 128033 128827 D COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: gym:GYMC10_4683 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: uncharacterized protein; IMG reference gene:2503956370; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator 128033..128827 Sphaerochaeta coccoides DSM 17374 10494381 YP_004410731.1 CDS Spico_0107 NC_015436.1 129123 130334 D COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: tde:TDE2361 high-affinity branched chain amino acid ABC transporter, amino acid-binding protein; PFAM: Extracellular ligand-binding receptor; SPTR: Extracellular ligand-binding receptor; IMG reference gene:2503956371; PFAM: Receptor family ligand binding region; ABC transporter substrate-binding protein 129123..130334 Sphaerochaeta coccoides DSM 17374 10494382 YP_004410732.1 CDS Spico_0108 NC_015436.1 130418 131296 D COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: tde:TDE2366 high-affinity branched-chain amino acid ABC transporter, permease; PFAM: ABC transporter permease; SPTR: High-affinity branched-chain amino acid ABC transporter, permease; IMG reference gene:2503956372; PFAM: Branched-chain amino acid transport system / permease component; inner-membrane translocator 130418..131296 Sphaerochaeta coccoides DSM 17374 10494383 YP_004410733.1 CDS Spico_0109 NC_015436.1 131309 132310 D COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: tde:TDE2365 high-affinity branched-chain amino acid ABC transporter, permease; PFAM: ABC transporter permease; SPTR: High-affinity branched-chain amino acid ABC transporter, permease; IMG reference gene:2503956373; PFAM: Branched-chain amino acid transport system / permease component; inner-membrane translocator 131309..132310 Sphaerochaeta coccoides DSM 17374 10494384 YP_004410734.1 CDS Spico_0110 NC_015436.1 132303 133064 D COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: bts:Btus_1713 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Amino acid ABC transporter, ATP-binding protein; IMG reference gene:2503956374; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; amino acid ABC transporter ATP-binding protein 132303..133064 Sphaerochaeta coccoides DSM 17374 10494385 YP_004410735.1 CDS Spico_0111 NC_015436.1 133066 133776 D COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: dhd:Dhaf_4922 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Branched-chain amino acid ABC superfamily ATP binding cassette transporter, ABC protein; IMG reference gene:2503956375; PFAM: ABC transporter; ABC transporter 133066..133776 Sphaerochaeta coccoides DSM 17374 10494386 YP_004410736.1 CDS Spico_0112 NC_015436.1 133814 134902 D KEGG: aco:Amico_0456 uroporphyrinogen decarboxylase; SPTR: Uroporphyrinogen decarboxylase; IMG reference gene:2503956376; PFAM: Uroporphyrinogen decarboxylase (URO-D); hypothetical protein 133814..134902 Sphaerochaeta coccoides DSM 17374 10494387 YP_004410737.1 CDS Spico_0113 NC_015436.1 134914 136182 D COGs: COG3681 conserved hypothetical protein; HAMAP: Uncharacterised protein family UPF0597; InterPro IPR021144; KEGG: cpy:Cphy_1256 hypothetical protein; SPTR: UPF0597 protein CUW_0913; IMG reference gene:2503956377; PFAM: Serine dehydratase alpha chain; hypothetical protein 134914..136182 Sphaerochaeta coccoides DSM 17374 10494388 YP_004410738.1 CDS Spico_0114 NC_015436.1 136196 137062 D COGs: COG0169 Shikimate 5-dehydrogenase; HAMAP: Shikimate, quinate/shikimate dehydrogenase; InterPro IPR011342:IPR022893:IPR013708:IPR006151; KEGG: mmw:Mmwyl1_0070 shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; SPTR: Shikimate dehydrogenase; TIGRFAM: Shikimate dehydrogenase; IMG reference gene:2503956378; PFAM: Shikimate dehydrogenase substrate binding domain; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; shikimate dehydrogenase 136196..137062 Sphaerochaeta coccoides DSM 17374 10494389 YP_004410739.1 CDS Spico_0115 NC_015436.1 137349 138107 D COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR012839:IPR007197; KEGG: ssa:SSA_0277 pyruvate formate-lyase 3, PFAM: Radical SAM; PRIAM: [Formate-C-acetyltransferase]-activating enzyme; SPTR: Pyruvate formate-lyase 3, ; TIGRFAM: Glycyl radical enzyme-activating; IMG reference gene:2503956379; PFAM: Radical SAM superfamily; TIGRFAM: glycyl-radical enzyme activating protein family; glycyl-radical enzyme activating protein family 137349..138107 Sphaerochaeta coccoides DSM 17374 10494390 YP_004410740.1 CDS Spico_0116 NC_015436.1 138605 139372 D COGs: COG0705 membrane protein; InterPro IPR022764; KEGG: sta:STHERM_c21730 rhomboid family protein; PFAM: Peptidase S54, rhomboid domain; SPTR: Rhomboid family protein; IMG reference gene:2503956380; PFAM: Rhomboid family; Peptidase S54, rhomboid domain-containing protein 138605..139372 Sphaerochaeta coccoides DSM 17374 10494391 YP_004410741.1 CDS Spico_0117 NC_015436.1 139373 140494 R COGs: COG1816 Adenosine deaminase; HAMAP: Adenosine deaminase; InterPro IPR006330:IPR001365; KEGG: ssm:Spirs_0300 adenosine deaminase; PFAM: Adenosine/AMP deaminase; PRIAM: Adenosine deaminase; SPTR: Adenosine deaminase; TIGRFAM: Adenosine deaminase; IMG reference gene:2503956381; PFAM: Adenosine/AMP deaminase; TIGRFAM: adenosine deaminase; adenosine deaminase complement(139373..140494) Sphaerochaeta coccoides DSM 17374 10494392 YP_004410742.1 CDS Spico_0118 NC_015436.1 140629 141141 D InterPro IPR002110; KEGG: wpi:WPa_1379 ankyrin repeat domain protein; PFAM: Ankyrin repeat; SPTR: FOG: Ankyrin repeat; IMG reference gene:2503956382; PFAM: Ankyrin repeat; ankyrin 140629..141141 Sphaerochaeta coccoides DSM 17374 10494393 YP_004410743.1 CDS Spico_0119 NC_015436.1 141203 142963 R COGs: COG0442 Prolyl-tRNA synthetase; HAMAP: Prolyl-tRNA synthetase, class IIa, bacterial; InterPro IPR004500:IPR002314:IPR007214:IPR004154; KEGG: stp:Strop_1793 prolyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; YbaK/aminoacyl-tRNA synthetase-associated domain; Anticodon-binding; SPTR: Prolyl-tRNA synthetase; TIGRFAM: Prolyl-tRNA synthetase, class IIa, bacterial; IMG reference gene:2503956383; PFAM: YbaK / prolyl-tRNA synthetases associated domain; Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family II; prolyl-tRNA synthetase complement(141203..142963) Sphaerochaeta coccoides DSM 17374 10494394 YP_004410744.1 CDS Spico_0120 NC_015436.1 143142 143789 D COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: ssm:Spirs_2391 class II aldolase/adducin family protein; PFAM: Class II aldolase/adducin, N-terminal; SPTR: Class II aldolase/adducin family protein; IMG reference gene:2503956384; PFAM: Class II Aldolase and Adducin N-terminal domain; class II aldolase/adducin family protein 143142..143789 Sphaerochaeta coccoides DSM 17374 10494395 YP_004410745.1 CDS Spico_0121 NC_015436.1 143877 144734 D COGs: COG3959 Transketolase N-terminal subunit; InterPro IPR005474; KEGG: ssm:Spirs_2992 transketolase domain protein; PFAM: Transketolase, N-terminal; PRIAM: Transketolase; SPTR: Transketolase domain protein; IMG reference gene:2503956385; PFAM: Transketolase, thiamine diphosphate binding domain; transketolase 143877..144734 Sphaerochaeta coccoides DSM 17374 10494396 YP_004410746.1 CDS Spico_0122 NC_015436.1 144731 145678 D COGs: COG3958 Transketolase C-terminal subunit; InterPro IPR005475:IPR005476; KEGG: ssm:Spirs_2991 transketolase domain protein; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; PRIAM: 1-deoxy-D-xylulose-5-phosphate synthase; SMART: Transketolase-like, pyrimidine-binding domain; SPTR: Transketolase domain protein; IMG reference gene:2503956386; PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; 1-deoxy-D-xylulose-5-phosphate synthase 144731..145678 Sphaerochaeta coccoides DSM 17374 10494397 YP_004410747.1 CDS Spico_0124 NC_015436.1 146435 147073 R KEGG: aag:AaeL_AAEL003101 hypothetical protein; SPTR: Suppression of copper sensitivity: lipoprotein modification in; IMG reference gene:2503956388; hypothetical protein complement(146435..147073) Sphaerochaeta coccoides DSM 17374 10494399 YP_004410748.1 CDS Spico_0125 NC_015436.1 147181 147567 R COGs: COG1765 redox protein regulator of disulfide bond formation; InterPro IPR003718; KEGG: tsi:TSIB_1698 predicted stress-inducible protein, OsmC/Ohr family; PFAM: Peroxiredoxin, OsmC-like protein; SPTR: uncharacterized protein; IMG reference gene:2503956389; PFAM: OsmC-like protein; OsmC family protein complement(147181..147567) Sphaerochaeta coccoides DSM 17374 10494400 YP_004410749.1 CDS Spico_0126 NC_015436.1 147602 149458 R COGs: COG0173 Aspartyl-tRNA synthetase; InterPro IPR004524:IPR004365:IPR004364:IPR004115; KEGG: ssm:Spirs_0312 aspartyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; GAD domain; PRIAM: Aspartate--tRNA ligase; SPTR: Aspartyl-tRNA synthetase; TIGRFAM: Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type; IMG reference gene:2503956390; PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type; aspartyl-tRNA synthetase complement(147602..149458) Sphaerochaeta coccoides DSM 17374 10494401 YP_004410750.1 CDS Spico_0128 NC_015436.1 150221 152605 D KEGG: lsg:lse_0723 internalin-like cell wall surface anchor (LPXTG) protein; SPTR: FG-GAP repeat domain protein; IMG reference gene:2503956392; hypothetical protein 150221..152605 Sphaerochaeta coccoides DSM 17374 10494403 YP_004410751.1 CDS Spico_0129 NC_015436.1 152698 153444 R KEGG: lth:KLTH0C00440g KLTH0C00440p; SPTR: Uncharacterized Fe-S protein; IMG reference gene:2503956393; hypothetical protein complement(152698..153444) Sphaerochaeta coccoides DSM 17374 10494404 YP_004410752.1 CDS Spico_0130 NC_015436.1 153600 154793 R KEGG: lhk:LHK_01554 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956394; hypothetical protein complement(153600..154793) Sphaerochaeta coccoides DSM 17374 10494405 YP_004410753.1 CDS Spico_0132 NC_015436.1 155712 156173 D KEGG: pdi:BDI_2608 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956396; hypothetical protein 155712..156173 Sphaerochaeta coccoides DSM 17374 10494407 YP_004410754.1 CDS Spico_0133 NC_015436.1 156170 157555 D COGs: COG2865 transcriptional regulator protein; InterPro IPR007421; KEGG: mpe:MYPE2570 hypothetical protein; PFAM: ATPase, AAA-4; SPTR: DNA recombinase RecG; IMG reference gene:2503956397; PFAM: Sugar-specific transcriptional regulator TrmB; Divergent AAA domain; transcriptional regulator 156170..157555 Sphaerochaeta coccoides DSM 17374 10494408 YP_004410755.1 CDS Spico_0135 NC_015436.1 158054 158575 D KEGG: zpr:ZPR_4496 membrane protein; SPTR: uncharacterized protein; IMG reference gene:2503956399; PFAM: Bacterial protein of unknown function (DUF939); hypothetical protein 158054..158575 Sphaerochaeta coccoides DSM 17374 10494410 YP_004410756.1 CDS Spico_0136 NC_015436.1 158576 159118 D COGs: COG2110 phosphatase homologous to the C-terminal domain of histone macroH2A1; InterPro IPR002589; KEGG: aco:Amico_1593 Appr-1-p processing domain protein; PFAM: Appr-1-p processing; SMART: Appr-1-p processing; SPTR: Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1; IMG reference gene:2503956400; PFAM: Macro domain; Appr-1-p processing protein 158576..159118 Sphaerochaeta coccoides DSM 17374 10494411 YP_004410757.1 CDS Spico_0137 NC_015436.1 159412 160320 R KEGG: bha:BH1197 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956401; hypothetical protein complement(159412..160320) Sphaerochaeta coccoides DSM 17374 10494412 YP_004410758.1 CDS Spico_0138 NC_015436.1 160327 160761 R InterPro IPR007168; KEGG: dbr:Deba_2761 phage shock protein C, PspC; PFAM: Phage shock domain; SPTR: phage shock protein C; IMG reference gene:2503956402; PFAM: PspC domain; PspC domain-containing protein complement(160327..160761) Sphaerochaeta coccoides DSM 17374 10494413 YP_004410759.1 CDS Spico_0139 NC_015436.1 160786 161157 R KEGG: gdj:Gdia_0837 methyl-accepting chemotaxis sensory transducer; SPTR: Predicted protein; IMG reference gene:2503956403; hypothetical protein complement(160786..161157) Sphaerochaeta coccoides DSM 17374 10494414 YP_004410760.1 CDS Spico_0140 NC_015436.1 161185 161838 R COGs: COG1842 Phage shock protein A (IM30) suppresses sigma54-dependent transcription; InterPro IPR007157; KEGG: dde:Dde_3226 phage shock protein A; PFAM: PspA/IM30; SPTR: Phage shock protein A; IMG reference gene:2503956404; PFAM: PspA/IM30 family; TIGRFAM: phage shock protein A; phage shock protein A, PspA complement(161185..161838) Sphaerochaeta coccoides DSM 17374 10494415 YP_004410761.1 CDS Spico_0141 NC_015436.1 162091 163200 D COGs: COG3604 Transcriptional regulator containing GAF AAA-type ATPase and DNA binding domains; InterPro IPR014317:IPR002078:IPR003593; KEGG: dbr:Deba_2764 sigma54 specific transcriptional regulator, Fis family; PFAM: RNA polymerase sigma factor 54, interaction; SMART: ATPase, AAA+ type, core; SPTR: Transcriptional regulator, Fis family / DNA-binding protein Fis; TIGRFAM: Transcription activator PspF; IMG reference gene:2503956405; PFAM: Sigma-54 interaction domain; TIGRFAM: psp operon transcriptional activator PspF; sigma 54 interacting domain-containing protein 162091..163200 Sphaerochaeta coccoides DSM 17374 10494416 YP_004410762.1 CDS Spico_0142 NC_015436.1 163282 163518 R InterPro IPR007168; KEGG: dma:DMR_38290 hypothetical membrane protein; PFAM: Phage shock domain; SPTR: Phage shock protein C, PspC; IMG reference gene:2503956406; PFAM: PspC domain; PspC domain-containing protein complement(163282..163518) Sphaerochaeta coccoides DSM 17374 10494417 YP_004410763.1 CDS Spico_0143 NC_015436.1 163522 164241 R COGs: COG1842 Phage shock protein A (IM30) suppresses sigma54-dependent transcription; InterPro IPR007157; KEGG: dvm:DvMF_1799 phage shock protein A, PspA; PFAM: PspA/IM30; SPTR: Phage shock protein A, PspA; IMG reference gene:2503956407; PFAM: PspA/IM30 family; TIGRFAM: phage shock protein A; phage shock protein A, PspA complement(163522..164241) Sphaerochaeta coccoides DSM 17374 10494418 YP_004410764.1 CDS Spico_0144 NC_015436.1 164512 165219 D COGs: COG0313 methyltransferase; HAMAP: Ribosomal RNA small subunit methyltransferase I; InterPro IPR008189:IPR000878; KEGG: ssm:Spirs_0315 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; PFAM: Tetrapyrrole methylase; SPTR: uncharacterized protein; TIGRFAM: Uncharacterised protein family UPF0011; IMG reference gene:2503956408; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family; Ribosomal RNA small subunit methyltransferase I 164512..165219 Sphaerochaeta coccoides DSM 17374 10494419 YP_004410765.1 CDS Spico_0145 NC_015436.1 165197 165994 D COGs: COG0566 rRNA methylase; InterPro IPR001537; KEGG: ssm:Spirs_0318 tRNA/rRNA methyltransferase (SpoU); PFAM: tRNA/rRNA methyltransferase, SpoU; SPTR: RNA methyltransferase, TrmH family; IMG reference gene:2503956409; PFAM: SpoU rRNA Methylase; tRNA/rRNA methyltransferase SpoU 165197..165994 Sphaerochaeta coccoides DSM 17374 10494420 YP_004410766.1 CDS Spico_0146 NC_015436.1 166090 168144 R COGs: COG1067 ATP-dependent protease; KEGG: ssm:Spirs_0321 peptidase S16 lon domain protein; SPTR: uncharacterized protein; manually curated; IMG reference gene:2503956410; PFAM: Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: lon-related ATP-dependent protease; peptidase S16 lon domain-containing protein complement(166090..168144) Sphaerochaeta coccoides DSM 17374 10494421 YP_004410767.1 CDS Spico_0147 NC_015436.1 168199 168960 D COGs: COG0327 conserved hypothetical protein; InterPro IPR002678; KEGG: tde:TDE2208 hypothetical protein; PFAM: NGG1p interacting factor 3, NIF3; SPTR: uncharacterized protein; TIGRFAM: NGG1p interacting factor 3, NIF3; manually curated; IMG reference gene:2503956411; PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family; NGG1p interacting factor 3 protein, NIF3 168199..168960 Sphaerochaeta coccoides DSM 17374 10494422 YP_004410768.1 CDS Spico_0148 NC_015436.1 168975 169619 D COGs: COG0597 Lipoprotein signal peptidase; HAMAP: Peptidase A8, signal peptidase II; InterPro IPR001872; KEGG: ssm:Spirs_0323 lipoprotein signal peptidase; PFAM: Peptidase A8, signal peptidase II; SPTR: Signal peptidase II; TIGRFAM: Peptidase A8, signal peptidase II; IMG reference gene:2503956412; PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase; lipoprotein signal peptidase 168975..169619 Sphaerochaeta coccoides DSM 17374 10494423 YP_004410769.1 CDS Spico_0149 NC_015436.1 169616 169903 D KEGG: ssm:Spirs_0324 leader peptide processing enzyme; SPTR: uncharacterized protein; IMG reference gene:2503956413; leader peptide processing enzyme 169616..169903 Sphaerochaeta coccoides DSM 17374 10494424 YP_004410770.1 CDS Spico_0150 NC_015436.1 169915 170952 D KEGG: lic:LIC11034 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956414; hypothetical protein 169915..170952 Sphaerochaeta coccoides DSM 17374 10494425 YP_004410771.1 CDS Spico_0151 NC_015436.1 171071 171583 R KEGG: fjo:Fjoh_0934 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956415; hypothetical protein complement(171071..171583) Sphaerochaeta coccoides DSM 17374 10494426 YP_004410772.1 CDS Spico_0152 NC_015436.1 171694 172785 R COGs: COG0657 Esterase/lipase; InterPro IPR013094; KEGG: amr:AM1_0524 lipase/esterase, SPTR: Lipase/esterase, ; IMG reference gene:2503956416; PFAM: alpha/beta hydrolase fold; hypothetical protein complement(171694..172785) Sphaerochaeta coccoides DSM 17374 10494427 YP_004410773.1 CDS Spico_0153 NC_015436.1 173021 173398 R KEGG: taf:THA_161 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956417; hypothetical protein complement(173021..173398) Sphaerochaeta coccoides DSM 17374 10494428 YP_004410774.1 CDS Spico_0154 NC_015436.1 173382 175328 R COGs: COG2706 3-carboxymuconate cyclase; InterPro IPR003313:IPR000005:IPR019405:IPR018060; KEGG: ssm:Spirs_3785 transcriptional regulator, AraC family; PFAM: Lactonase, 7-bladed beta propeller; HTH transcriptional regulator, AraC, arabinose-binding/dimerisation; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: 6-phosphogluconolactonase; IMG reference gene:2503956418; PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; 3-carboxy-cis,cis-muconate lactonizing enzyme; AraC family transcriptional regulator complement(173382..175328) Sphaerochaeta coccoides DSM 17374 10494429 YP_004410775.1 CDS Spico_0155 NC_015436.1 175420 176913 D COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR006000:IPR018484:IPR018485; KEGG: xca:xccb100_2505 xylulokinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; SPTR: Xylulokinase; TIGRFAM: Xylulokinase; IMG reference gene:2503956419; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: D-xylulose kinase; xylulokinase 175420..176913 Sphaerochaeta coccoides DSM 17374 10494430 YP_004410776.1 CDS Spico_0156 NC_015436.1 176987 178321 D COGs: COG2115 Xylose isomerase; HAMAP: Xylose isomerase; InterPro IPR013452:IPR001998:IPR012307; KEGG: ssm:Spirs_3786 xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain; PRIAM: Xylose isomerase; SPTR: Xylose isomerase 2; TIGRFAM: Xylose isomerase, bacterial type; IMG reference gene:2503956420; PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase; D-xylose isomerase 176987..178321 Sphaerochaeta coccoides DSM 17374 10494431 YP_004410777.1 CDS Spico_0157 NC_015436.1 178299 179381 R COGs: COG4677 Pectin methylesterase; InterPro IPR000070; KEGG: rmr:Rmar_2469 pectinesterase; PFAM: Pectinesterase, catalytic; PRIAM: Pectinesterase; SPTR: Pectinesterase; IMG reference gene:2503956421; PFAM: Pectinesterase; pectinesterase complement(178299..179381) Sphaerochaeta coccoides DSM 17374 10494432 YP_004410778.1 CDS Spico_0158 NC_015436.1 179539 181281 D COGs: COG1785 Alkaline phosphatase; InterPro IPR001952; KEGG: avi:Avi_0605 alkaline phosphatase; PFAM: Alkaline phosphatase; SMART: Alkaline phosphatase; SPTR: Alkaline phosphatase; IMG reference gene:2503956422; PFAM: Alkaline phosphatase; alkaline phosphatase 179539..181281 Sphaerochaeta coccoides DSM 17374 10494433 YP_004410779.1 CDS Spico_0159 NC_015436.1 181360 181782 D KEGG: rru:Rru_A1290 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956423; hypothetical protein 181360..181782 Sphaerochaeta coccoides DSM 17374 10494434 YP_004410780.1 CDS Spico_0160 NC_015436.1 181821 182516 D COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: pct:PC1_3918 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; IMG reference gene:2503956424; PFAM: ABC transporter; phosphonate-transporting ATPase 181821..182516 Sphaerochaeta coccoides DSM 17374 10494435 YP_004410781.1 CDS Spico_0161 NC_015436.1 182513 183754 D InterPro IPR003838; KEGG: rru:Rru_A1292 hypothetical protein; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: uncharacterized protein; IMG reference gene:2503956425; PFAM: Predicted permease; hypothetical protein 182513..183754 Sphaerochaeta coccoides DSM 17374 10494436 YP_004410782.1 CDS Spico_0162 NC_015436.1 183934 185286 R COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR002550:IPR000644:IPR005170; KEGG: cth:Cthe_2870 hypothetical protein; PFAM: Domain of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated domain; SPTR: uncharacterized protein; IMG reference gene:2503956426; PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; hypothetical protein complement(183934..185286) Sphaerochaeta coccoides DSM 17374 10494437 YP_004410783.1 CDS Spico_0163 NC_015436.1 185447 186070 R COGs: COG1392 Phosphate transport regulator (distant homolog of PhoU); InterPro IPR018445; KEGG: cce:Ccel_2118 protein of unknown function DUF47; PFAM: Putitive phosphate transport regulator; SPTR: uncharacterized protein; IMG reference gene:2503956427; PFAM: Protein of unknown function DUF47; TIGRFAM: TIGR00153 family protein; phosphate transport regulator complement(185447..186070) Sphaerochaeta coccoides DSM 17374 10494438 YP_004410784.1 CDS Spico_0164 NC_015436.1 186084 187127 R COGs: COG0306 Phosphate/sulphate permease; InterPro IPR001204; KEGG: efa:EF2442 phosphate transporter family protein; PFAM: Phosphate transporter; SPTR: Phosphate transporter family protein; IMG reference gene:2503956428; PFAM: Phosphate transporter family; phosphate transporter complement(186084..187127) Sphaerochaeta coccoides DSM 17374 10494439 YP_004410785.1 CDS Spico_0165 NC_015436.1 187433 188290 R COGs: COG2510 membrane protein; InterPro IPR000620; KEGG: cpy:Cphy_2870 hypothetical protein; PFAM: Drug/metabolite transporter; SPTR: uncharacterized protein; IMG reference gene:2503956429; PFAM: EamA-like transporter family; hypothetical protein complement(187433..188290) Sphaerochaeta coccoides DSM 17374 10494440 YP_004410786.1 CDS Spico_0166 NC_015436.1 188292 191132 R KEGG: hor:Hore_08230 WD40 domain protein beta propeller; SPTR: WD40 domain protein beta Propeller; IMG reference gene:2503956430; PFAM: WD40-like Beta Propeller Repeat; hypothetical protein complement(188292..191132) Sphaerochaeta coccoides DSM 17374 10494441 YP_004410787.1 CDS Spico_0167 NC_015436.1 191237 191500 R COGs: COG1937 conserved hypothetical protein; InterPro IPR003735; KEGG: apr:Apre_0988 protein of unknown function DUF156; PFAM: Protein of unknown function DUF156; SPTR: uncharacterized protein; IMG reference gene:2503956431; PFAM: Uncharacterised BCR, COG1937; hypothetical protein complement(191237..191500) Sphaerochaeta coccoides DSM 17374 10494442 YP_004410788.1 CDS Spico_0168 NC_015436.1 191845 193956 R COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR011110:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; Two component regulator propeller; SPTR: Alpha-tubulin suppressor and related RCC1 domain-containing protein-like protein; IMG reference gene:2503956432; PFAM: Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 complement(191845..193956) Sphaerochaeta coccoides DSM 17374 10494443 YP_004410789.1 CDS Spico_0169 NC_015436.1 194213 194362 R IMG reference gene:2503956433; hypothetical protein complement(194213..194362) Sphaerochaeta coccoides DSM 17374 10494444 YP_004410790.1 CDS Spico_0170 NC_015436.1 194484 195365 D InterPro IPR002123; KEGG: pgi:PG1876 hypothetical protein; PFAM: Phospholipid/glycerol acyltransferase; SPTR: Acyltransferase; IMG reference gene:2503956434; phospholipid/glycerol acyltransferase 194484..195365 Sphaerochaeta coccoides DSM 17374 10494445 YP_004410791.1 CDS Spico_0171 NC_015436.1 195399 197135 R COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR001140:IPR003439:IPR003593; KEGG: ppy:PPE_00122 hypothetical ABC transporter ATP-binding protein; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Hypothetical ABC transporter ATP-binding protein; IMG reference gene:2503956435; PFAM: ABC transporter; ABC transporter transmembrane region; xenobiotic-transporting ATPase complement(195399..197135) Sphaerochaeta coccoides DSM 17374 10494446 YP_004410792.1 CDS Spico_0172 NC_015436.1 197132 198865 R COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR001140:IPR003439:IPR003593; KEGG: ppy:PPE_00123 ABC-type multidrug transport system protein; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC-type multidrug transport system protein; IMG reference gene:2503956436; PFAM: ABC transporter; ABC transporter transmembrane region; xenobiotic-transporting ATPase complement(197132..198865) Sphaerochaeta coccoides DSM 17374 10494447 YP_004410793.1 CDS Spico_0173 NC_015436.1 199182 200489 D COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: ssm:Spirs_1368 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein family 1; IMG reference gene:2503956437; PFAM: Bacterial extracellular solute-binding protein; carbohydrate ABC transporter substrate-binding protein 199182..200489 Sphaerochaeta coccoides DSM 17374 10494448 YP_004410794.1 CDS Spico_0174 NC_015436.1 200553 201482 D COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: ssm:Spirs_1367 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport system inner membrane component; IMG reference gene:2503956438; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 1 200553..201482 Sphaerochaeta coccoides DSM 17374 10494449 YP_004410795.1 CDS Spico_0175 NC_015436.1 201493 202374 D COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: ssm:Spirs_1366 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport system inner membrane component; IMG reference gene:2503956439; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 2 201493..202374 Sphaerochaeta coccoides DSM 17374 10494450 YP_004410796.1 CDS Spico_0176 NC_015436.1 202384 203016 D COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR006402:IPR005834; KEGG: ssm:Spirs_1365 HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; IMG reference gene:2503956440; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; HAD-superfamily hydrolase 202384..203016 Sphaerochaeta coccoides DSM 17374 10494451 YP_004410797.1 CDS Spico_0177 NC_015436.1 203058 203828 R COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR001789:IPR000005:IPR018060; KEGG: bcl:ABC3646 two-component response regulator; PFAM: Signal transduction response regulator, receiver domain; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; Signal transduction response regulator, receiver domain; SPTR: Two-component response regulator; IMG reference gene:2503956441; PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator complement(203058..203828) Sphaerochaeta coccoides DSM 17374 10494452 YP_004410798.1 CDS Spico_0178 NC_015436.1 203838 205652 R COGs: COG2972 signal transduction protein with a C-terminal ATPase domain; InterPro IPR003660:IPR010559:IPR003594; KEGG: ssm:Spirs_1363 integral membrane sensor signal transduction histidine kinase; PFAM: Signal transduction histidine kinase, internal region; HAMP linker domain; ATPase-like, ATP-binding domain; SMART: HAMP linker domain; SPTR: Predicted signal transduction protein with a C-terminal ATPase domain; IMG reference gene:2503956442; PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; integral membrane sensor signal transduction histidine kinase complement(203838..205652) Sphaerochaeta coccoides DSM 17374 10494453 YP_004410799.1 CDS Spico_0179 NC_015436.1 206041 206265 D KEGG: cth:Cthe_1655 hypothetical protein; SPTR: Predicted transcriptional regulator; IMG reference gene:2503956443; hypothetical protein 206041..206265 Sphaerochaeta coccoides DSM 17374 10494454 YP_004410800.1 CDS Spico_0180 NC_015436.1 206269 207207 D KEGG: prw:PsycPRwf_1121 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956444; hypothetical protein 206269..207207 Sphaerochaeta coccoides DSM 17374 10494455 YP_004410801.1 CDS Spico_0181 NC_015436.1 207204 211460 D InterPro IPR006935:IPR011639:IPR018306:IPR014001; KEGG: spr:spr1101 type II restriction endonuclease, SMART: Bacteriophage T5, ORF172 DNA-binding; DEAD-like helicase, N-terminal; SPTR: uncharacterized protein; IMG reference gene:2503956445; PFAM: SNF2 family N-terminal domain; Eco57I restriction endonuclease; helicase A859L 207204..211460 Sphaerochaeta coccoides DSM 17374 10494456 YP_004410802.1 CDS Spico_0182 NC_015436.1 211474 212505 D COGs: COG3177 conserved hypothetical protein; InterPro IPR003812; KEGG: dsy:DSY0678 hypothetical protein; PFAM: Filamentation induced by cAMP/death on curing-related; SPTR: uncharacterized protein; IMG reference gene:2503956446; PFAM: Fic/DOC family; Fic family protein 211474..212505 Sphaerochaeta coccoides DSM 17374 10494457 YP_004410803.1 CDS Spico_0183 NC_015436.1 212627 212833 D KEGG: dhd:Dhaf_4948 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956447; hypothetical protein 212627..212833 Sphaerochaeta coccoides DSM 17374 10494458 YP_004410804.1 CDS Spico_0184 NC_015436.1 212951 214198 D KEGG: bln:Blon_0974 HipA domain protein; SPTR: HipA-like C-terminal domain; IMG reference gene:2503956448; hypothetical protein 212951..214198 Sphaerochaeta coccoides DSM 17374 10494459 YP_004410805.1 CDS Spico_0185 NC_015436.1 214286 214552 R COGs: COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system; InterPro IPR012753:IPR007712; KEGG: esi:Exig_1264 addiction module antitoxin; PFAM: Plasmid stabilisation system; SPTR: Addiction module toxin RelE; TIGRFAM: Addiction module toxin, RelE/StbE; IMG reference gene:2503956449; PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family; RelE/StbE family addiction module toxin complement(214286..214552) Sphaerochaeta coccoides DSM 17374 10494460 YP_004410806.1 CDS Spico_0186 NC_015436.1 214554 214781 R KEGG: fnu:FN1099 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956450; PFAM: Ribbon-helix-helix protein, copG family; hypothetical protein complement(214554..214781) Sphaerochaeta coccoides DSM 17374 10494461 YP_004410807.1 CDS Spico_0187 NC_015436.1 215042 215161 D IMG reference gene:2503956451; hypothetical protein 215042..215161 Sphaerochaeta coccoides DSM 17374 10494462 YP_004410808.1 CDS Spico_0188 NC_015436.1 215700 215804 D IMG reference gene:2503956452; hypothetical protein 215700..215804 Sphaerochaeta coccoides DSM 17374 10494463 YP_004410809.1 CDS Spico_0190 NC_015436.1 217170 217748 D KEGG: bcl:ABC1165 cell surface protein; SPTR: Cell surface protein; IMG reference gene:2503956455; hypothetical protein 217170..217748 Sphaerochaeta coccoides DSM 17374 10494466 YP_004410810.1 CDS Spico_0191 NC_015436.1 217765 218238 D COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR000212; KEGG: bbr:BB4600 ATP-dependent DNA helicase; PFAM: DNA helicase, UvrD/REP type; SPTR: uncharacterized protein; IMG reference gene:2503956456; PFAM: UvrD/REP helicase; UvrD/REP helicase 217765..218238 Sphaerochaeta coccoides DSM 17374 10494467 YP_004410811.1 CDS Spico_0192 NC_015436.1 218281 218508 D KEGG: fnu:FN0210 CopG family transcriptional regulator; SPTR: Toxin-antitoxin system protein; IMG reference gene:2503956457; CopG family transcriptional regulator 218281..218508 Sphaerochaeta coccoides DSM 17374 10494468 YP_004410812.1 CDS Spico_0193 NC_015436.1 218509 218775 D COGs: COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system; InterPro IPR012753:IPR007712; KEGG: esi:Exig_1264 addiction module antitoxin; PFAM: Plasmid stabilisation system; SPTR: uncharacterized protein; TIGRFAM: Addiction module toxin, RelE/StbE; IMG reference gene:2503956458; PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family; RelE/StbE family addiction module toxin 218509..218775 Sphaerochaeta coccoides DSM 17374 10494469 YP_004410813.1 CDS Spico_0194 NC_015436.1 218970 219767 D COGs: COG3177 conserved hypothetical protein; InterPro IPR003812; KEGG: hmo:HM1_0044 fic family protein, PFAM: Filamentation induced by cAMP/death on curing-related; SPTR: Fic family protein, ; IMG reference gene:2503956459; PFAM: Fic/DOC family; Fic family protein 218970..219767 Sphaerochaeta coccoides DSM 17374 10494470 YP_004410814.1 CDS Spico_0195 NC_015436.1 219715 219921 D KEGG: afn:Acfer_1116 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956460; hypothetical protein 219715..219921 Sphaerochaeta coccoides DSM 17374 10494471 YP_004410815.1 CDS Spico_0197 NC_015436.1 220373 220591 D KEGG: cbr:CBG18870 Hypothetical protein CBG18870; SPTR: uncharacterized protein; IMG reference gene:2503956462; hypothetical protein 220373..220591 Sphaerochaeta coccoides DSM 17374 10494473 YP_004410816.1 CDS Spico_0198 NC_015436.1 220737 221942 D KEGG: ele:Elen_0127 DNA binding domain protein, excisionase; SPTR: uncharacterized protein; IMG reference gene:2503956463; PFAM: HipA-like C-terminal domain; DNA binding domain-containing protein, excisionase 220737..221942 Sphaerochaeta coccoides DSM 17374 10494474 YP_004410817.1 CDS Spico_0199 NC_015436.1 221991 222155 D IMG reference gene:2503956464; hypothetical protein 221991..222155 Sphaerochaeta coccoides DSM 17374 10494475 YP_004410818.1 CDS Spico_0201 NC_015436.1 222428 222766 D InterPro IPR009241; KEGG: ere:EUBREC_3676 hypothetical protein; PFAM: Protein of unknown function DUF891; SPTR: Toxin-antitoxin system, toxin component, RelE family; IMG reference gene:2503956466; PFAM: Phage derived protein Gp49-like (DUF891); hypothetical protein 222428..222766 Sphaerochaeta coccoides DSM 17374 10494477 YP_004410819.1 CDS Spico_0202 NC_015436.1 222763 223062 D InterPro IPR001387; KEGG: ere:EUBREC_3010 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator, XRE family; IMG reference gene:2503956467; PFAM: Helix-turn-helix; helix-turn-helix domain-containing protein 222763..223062 Sphaerochaeta coccoides DSM 17374 10494478 YP_004410820.1 CDS Spico_0203 NC_015436.1 223302 224600 R COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: ssm:Spirs_1023 aminotransferase class I and II; PFAM: Aminotransferase, class I/classII; SPTR: Aminotransferase class I and II; IMG reference gene:2503956468; PFAM: Aminotransferase class I and II; class I and II aminotransferase complement(223302..224600) Sphaerochaeta coccoides DSM 17374 10494479 YP_004410821.1 CDS Spico_0204 NC_015436.1 224718 225482 R COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway); InterPro IPR002529; KEGG: mta:Moth_1492 5-carboxymethyl-2-hydroxymuconate delta-isomerase; PFAM: Fumarylacetoacetase, C-terminal-like; PRIAM: 5-carboxymethyl-2-hydroxymuconate Delta-isomerase; SPTR: 5-carboxymethyl-2-hydroxymuconate Delta-isomerase; IMG reference gene:2503956469; PFAM: Domain of unknown function (DUF2437); Fumarylacetoacetate (FAA) hydrolase; 5-carboxymethyl-2-hydroxymuconate delta-isomerase complement(224718..225482) Sphaerochaeta coccoides DSM 17374 10494480 YP_004410822.1 CDS Spico_0205 NC_015436.1 225691 226242 D COGs: COG1704 conserved hypothetical protein; InterPro IPR007156; KEGG: ddf:DEFDS_1131 hypothetical protein; PFAM: LemA; SPTR: uncharacterized protein; IMG reference gene:2503956470; PFAM: LemA family; LemA family protein 225691..226242 Sphaerochaeta coccoides DSM 17374 10494481 YP_004410823.1 CDS Spico_0206 NC_015436.1 226257 228155 D InterPro IPR018702; KEGG: nde:NIDE3501 hypothetical protein; PFAM: Protein of unknown function DUF2207, membrane; SPTR: uncharacterized protein; IMG reference gene:2503956471; PFAM: Predicted membrane protein (DUF2207); hypothetical protein 226257..228155 Sphaerochaeta coccoides DSM 17374 10494482 YP_004410824.1 CDS Spico_0207 NC_015436.1 228149 228253 D IMG reference gene:2503956472; hypothetical protein 228149..228253 Sphaerochaeta coccoides DSM 17374 10494483 YP_004410825.1 CDS Spico_0208 NC_015436.1 228250 229281 D KEGG: pla:Plav_0415 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956473; PFAM: Protein of unknown function (DUF2804); hypothetical protein 228250..229281 Sphaerochaeta coccoides DSM 17374 10494484 YP_004410826.1 CDS Spico_0209 NC_015436.1 229546 229821 R COGs: COG0724 RNA-binding protein (RRM domain); InterPro IPR000504; KEGG: ssm:Spirs_2330 RNP-1 like RNA-binding protein; PFAM: RNA recognition motif domain; SMART: RNA recognition motif domain; SPTR: RNP-1 like RNA-binding protein; IMG reference gene:2503956474; PFAM: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); RNP-1 like RNA-binding protein complement(229546..229821) Sphaerochaeta coccoides DSM 17374 10494485 YP_004410827.1 CDS Spico_0210 NC_015436.1 230235 230912 D InterPro IPR000374; KEGG: acl:ACL_1417 integral membrane protein; PFAM: Phosphatidate cytidylyltransferase; SPTR: Integral membrane protein; IMG reference gene:2503956475; PFAM: Cytidylyltransferase; phosphatidate cytidylyltransferase 230235..230912 Sphaerochaeta coccoides DSM 17374 10494486 YP_004410828.1 CDS Spico_0211 NC_015436.1 230903 231766 D COGs: COG1836 membrane protein; InterPro IPR002794; KEGG: gct:GC56T3_1039 protein of unknown function DUF92 transmembrane; PFAM: Protein of unknown function DUF92, TMEM19; SPTR: uncharacterized protein; IMG reference gene:2503956476; PFAM: Integral membrane protein DUF92; TIGRFAM: TIGR00297 family protein; hypothetical protein 230903..231766 Sphaerochaeta coccoides DSM 17374 10494487 YP_004410829.1 CDS Spico_0212 NC_015436.1 231936 233573 D COGs: COG0459 Chaperonin GroEL (HSP60 family); HAMAP: Chaperonin Cpn60; InterPro IPR001844:IPR002423; KEGG: ssm:Spirs_3240 chaperonin GroEL; PFAM: Chaperonin Cpn60/TCP-1; SPTR: 60 kDa chaperonin; TIGRFAM: Chaperonin Cpn60; IMG reference gene:2503956477; PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL; molecular chaperone GroEL 231936..233573 Sphaerochaeta coccoides DSM 17374 10494488 YP_004410830.1 CDS Spico_0213 NC_015436.1 233786 234271 D COGs: COG1862 Preprotein translocase subunit YajC; InterPro IPR003849; KEGG: ssm:Spirs_3238 preprotein translocase, YajC subunit; PFAM: Preprotein translocase YajC; SPTR: Preprotein translocase, YajC subunit; TIGRFAM: Preprotein translocase YajC; IMG reference gene:2503956478; PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit; preprotein translocase subunit YajC 233786..234271 Sphaerochaeta coccoides DSM 17374 10494489 YP_004410831.1 CDS Spico_0214 NC_015436.1 234308 236038 D COGs: COG0342 Preprotein translocase subunit SecD; KEGG: ssm:Spirs_3237 protein-export membrane protein SecD; SPTR: uncharacterized protein; IMG reference gene:2503956479; PFAM: Protein export membrane protein; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein SecD 234308..236038 Sphaerochaeta coccoides DSM 17374 10494490 YP_004410832.1 CDS Spico_0216 NC_015436.1 236924 237832 D COGs: COG0761 Penicillin tolerance protein; HAMAP: LytB protein; InterPro IPR003451; KEGG: ccu:Ccur_06870 (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase; PFAM: LytB protein; PRIAM: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SPTR: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; TIGRFAM: LytB protein; IMG reference gene:2503956481; PFAM: LytB protein; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming); 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 236924..237832 Sphaerochaeta coccoides DSM 17374 10494492 YP_004410833.1 CDS Spico_0217 NC_015436.1 237848 238522 D COGs: COG2344 AT-rich DNA-binding protein; HAMAP: Transcriptional repressor, redox-sensing, Rex; InterPro IPR022876:IPR009718:IPR003781; KEGG: ssm:Spirs_1689 CoA-binding domain protein; PFAM: CoA-binding; Rex DNA-binding, C-terminal; SMART: CoA-binding; SPTR: CoA-binding domain protein; IMG reference gene:2503956482; PFAM: CoA binding domain; DNA-binding protein N-terminus; redox-sensing transcriptional repressor rex 237848..238522 Sphaerochaeta coccoides DSM 17374 10494493 YP_004410834.1 CDS Spico_0218 NC_015436.1 238500 239024 D COGs: COG1956 GAF domain-containing protein; InterPro IPR003018; KEGG: bpu:BPUM_2609 hypothetical protein; PFAM: GAF; SPTR: Hypothetical GAF domain protein; IMG reference gene:2503956483; PFAM: GAF domain; GAF sensor protein 238500..239024 Sphaerochaeta coccoides DSM 17374 10494494 YP_004410835.1 CDS Spico_0219 NC_015436.1 239396 241162 D COGs: COG0441 Threonyl-tRNA synthetase; InterPro IPR002320:IPR012947:IPR002314:IPR004154; KEGG: ssm:Spirs_3229 threonyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Threonyl/alanyl tRNA synthetase, SAD; Anticodon-binding; SMART: Threonyl/alanyl tRNA synthetase, SAD; SPTR: Threonyl-tRNA synthetase; TIGRFAM: Threonyl-tRNA synthetase, class IIa; IMG reference gene:2503956484; PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: threonyl-tRNA synthetase; Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase 239396..241162 Sphaerochaeta coccoides DSM 17374 10494495 YP_004410836.1 CDS Spico_0220 NC_015436.1 241164 242702 D COGs: COG2317 Zn-dependent carboxypeptidase; InterPro IPR001333; KEGG: sta:STHERM_c16020 thermostable carboxypeptidase 1; PFAM: Peptidase M32, carboxypeptidase Taq metallopeptidase; PRIAM: Carboxypeptidase Taq; SPTR: Thermostable carboxypeptidase 1; IMG reference gene:2503956485; PFAM: Carboxypeptidase Taq (M32) metallopeptidase; carboxypeptidase Taq 241164..242702 Sphaerochaeta coccoides DSM 17374 10494496 YP_004410837.1 CDS Spico_0221 NC_015436.1 242765 243361 D COGs: COG0558 Phosphatidylglycerophosphate synthase; InterPro IPR004570:IPR000462; KEGG: ssm:Spirs_3225 CDP-diacylglycerol/glycerol-3-phosphate3-phospha tidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: uncharacterized protein; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; IMG reference gene:2503956486; PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase 242765..243361 Sphaerochaeta coccoides DSM 17374 10494497 YP_004410838.1 CDS Spico_0222 NC_015436.1 243358 244170 D InterPro IPR006379; KEGG: ssm:Spirs_3224 HAD-superfamily hydrolase, subfamily IIB; SPTR: hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; IMG reference gene:2503956487; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; HAD-superfamily hydrolase 243358..244170 Sphaerochaeta coccoides DSM 17374 10494498 YP_004410839.1 CDS Spico_0223 NC_015436.1 250138 250947 R COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: dsy:DSY0105 hypothetical protein; PFAM: ABC-3; SPTR: uncharacterized protein; IMG reference gene:2503956492; PFAM: ABC 3 transport family; ABC transporter complement(250138..250947) Sphaerochaeta coccoides DSM 17374 10494503 YP_004410840.1 CDS Spico_0224 NC_015436.1 250928 251614 R COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: dhd:Dhaf_0043 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: uncharacterized protein; IMG reference gene:2503956493; PFAM: ABC transporter; Fe(3+)-transporting ATPase complement(250928..251614) Sphaerochaeta coccoides DSM 17374 10494504 YP_004410841.1 CDS Spico_0225 NC_015436.1 251927 252943 D COGs: COG1135 ABC-type metal ion transport system ATPase component; InterPro IPR003439:IPR018449:IPR003593; KEGG: fsu:Fisuc_1036 ABC transporter related protein; PFAM: ABC transporter-like; NIL domain; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; NIL domain; SPTR: Methionine import ATP-binding protein MetN; IMG reference gene:2503956494; PFAM: ABC transporter; NIL domain; sulfate-transporting ATPase 251927..252943 Sphaerochaeta coccoides DSM 17374 10494505 YP_004410842.1 CDS Spico_0226 NC_015436.1 252940 253617 D COGs: COG2011 ABC-type metal ion transport system permease component; InterPro IPR000515; KEGG: fsu:Fisuc_1035 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: D-methionine transport system permease MetI; IMG reference gene:2503956495; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 252940..253617 Sphaerochaeta coccoides DSM 17374 10494506 YP_004410843.1 CDS Spico_0227 NC_015436.1 253716 254525 D COGs: COG1464 ABC-type metal ion transport system periplasmic component/surface antigen; InterPro IPR004872; KEGG: fsu:Fisuc_1037 NlpA lipoprotein; PFAM: NLPA lipoprotein; SPTR: NLPA lipoprotein; IMG reference gene:2503956496; PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family; NLPA lipoprotein 253716..254525 Sphaerochaeta coccoides DSM 17374 10494507 YP_004410844.1 CDS Spico_0228 NC_015436.1 254740 256083 D COGs: COG1322 conserved hypothetical protein; InterPro IPR003798; KEGG: bgl:bglu_1g09340 RmuC domain protein; PFAM: DNA recombination RmuC; SPTR: uncharacterized protein; IMG reference gene:2503956497; PFAM: RmuC family; RmuC-domain-containing protein 254740..256083 Sphaerochaeta coccoides DSM 17374 10494508 YP_004410845.1 CDS Spico_0229 NC_015436.1 256147 257166 D COGs: COG0078 Ornithine carbamoyltransferase; HAMAP: Ornithine carbamoyltransferase; InterPro IPR002292:IPR006132:IPR006131; KEGG: pmo:Pmob_0068 ornithine carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain; Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; PRIAM: Ornithine carbamoyltransferase; SPTR: Ornithine carbamoyltransferase; TIGRFAM: Ornithine carbamoyltransferase; IMG reference gene:2503956498; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase; ornithine carbamoyltransferase 256147..257166 Sphaerochaeta coccoides DSM 17374 10494509 YP_004410846.1 CDS Spico_0230 NC_015436.1 257253 258383 D COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR011110:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; Two component regulator propeller; SPTR: Alpha-tubulin suppressor and related RCC1 domain-containing protein-like protein; IMG reference gene:2503956499; PFAM: Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 257253..258383 Sphaerochaeta coccoides DSM 17374 10494510 YP_004410847.1 CDS Spico_0231 NC_015436.1 258810 259934 D COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; SPTR: Alpha-tubulin suppressor and related RCC1 domain-containing protein-like protein; IMG reference gene:2503956500; PFAM: Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 258810..259934 Sphaerochaeta coccoides DSM 17374 10494511 YP_004410848.1 CDS Spico_0232 NC_015436.1 260034 260477 R COGs: COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); InterPro IPR008331; KEGG: tpp:TPASS_1038 bacterioferrin TpF1; PFAM: Ferritin/Dps protein; SPTR: Antigen TyF1; IMG reference gene:2503956501; PFAM: Ferritin-like domain; ferritin complement(260034..260477) Sphaerochaeta coccoides DSM 17374 10494512 YP_004410849.1 CDS Spico_0233 NC_015436.1 260689 262191 D COGs: COG3604 Transcriptional regulator containing GAF AAA-type ATPase and DNA binding domains; InterPro IPR003018:IPR002078:IPR002197:IPR003593; KEGG: dat:HRM2_00790 FhlA; PFAM: RNA polymerase sigma factor 54, interaction; GAF; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core; GAF; SPTR: FhlA; IMG reference gene:2503956502; PFAM: GAF domain; Sigma-54 interaction domain; Fis family transcriptional regulator 260689..262191 Sphaerochaeta coccoides DSM 17374 10494513 YP_004410850.1 CDS Spico_0234 NC_015436.1 262542 265148 D COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR017730:IPR004176:IPR003959:IPR013093:IPR 019489:IPR003593; KEGG: ssm:Spirs_0929 ATP-dependent chaperone ClpB; PFAM: ATPase, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: ATP-dependent chaperone protein ClpB; TIGRFAM: Chaperonin ClpB; IMG reference gene:2503956503; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB; ATP-dependent chaperone ClpB 262542..265148 Sphaerochaeta coccoides DSM 17374 10494514 YP_004410851.1 CDS Spico_0235 NC_015436.1 265300 266025 D COGs: COG1811 Uncharacterized membrane protein possible Na+ channel or pump; InterPro IPR007563; KEGG: brm:Bmur_0947 protein of unknown function DUF554; PFAM: Protein of unknown function DUF554; SPTR: uncharacterized protein; IMG reference gene:2503956504; PFAM: Protein of unknown function (DUF554); hypothetical protein 265300..266025 Sphaerochaeta coccoides DSM 17374 10494515 YP_004410852.1 CDS Spico_0236 NC_015436.1 266047 267516 R COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933:IPR011650; KEGG: mxa:MXAN_2289 hypothetical protein; PFAM: Peptidase M20; Peptidase M20, dimerisation; PRIAM: Gly-Xaa carboxypeptidase; SPTR: Peptidase, M20E (Gly-X carboxypeptidase) subfamily; IMG reference gene:2503956505; PFAM: Peptidase M20/M25/M40; Peptidase dimerisation domain; Gly-Xaa carboxypeptidase complement(266047..267516) Sphaerochaeta coccoides DSM 17374 10494516 YP_004410853.1 CDS Spico_0237 NC_015436.1 267517 267693 D KEGG: cja:CJA_2050 generic methyl-transferase; IMG reference gene:2503956506; hypothetical protein 267517..267693 Sphaerochaeta coccoides DSM 17374 10494517 YP_004410854.1 CDS Spico_0238 NC_015436.1 267677 268309 D InterPro IPR001647; KEGG: cts:Ctha_0156 transcriptional regulator, TetR family; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family; IMG reference gene:2503956507; PFAM: Bacterial regulatory proteins, tetR family; TetR family transcriptional regulator 267677..268309 Sphaerochaeta coccoides DSM 17374 10494518 YP_004410855.1 CDS Spico_0239 NC_015436.1 268371 270602 R COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; IMG reference gene:2503956508; PFAM: Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 complement(268371..270602) Sphaerochaeta coccoides DSM 17374 10494519 YP_004410856.1 CDS Spico_0240 NC_015436.1 270820 273357 R COGs: COG0058 Glucan phosphorylase; InterPro IPR011833:IPR000811; KEGG: ssm:Spirs_0940 glycogen/starch/alpha-glucan phosphorylase; PFAM: Glycosyl transferase, family 35; SPTR: Phosphorylase; TIGRFAM: Glycogen/starch/alpha-glucan phosphorylase; IMG reference gene:2503956509; PFAM: Carbohydrate phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases; glycogen phosphorylase complement(270820..273357) Sphaerochaeta coccoides DSM 17374 10494520 YP_004410857.1 CDS Spico_0241 NC_015436.1 273374 273535 D IMG reference gene:2503956510; hypothetical protein 273374..273535 Sphaerochaeta coccoides DSM 17374 10494521 YP_004410858.1 CDS Spico_0242 NC_015436.1 273532 273738 D KEGG: pan:PODANSg09393 hypothetical protein; IMG reference gene:2503956511; hypothetical protein 273532..273738 Sphaerochaeta coccoides DSM 17374 10494522 YP_004410859.1 CDS Spico_0243 NC_015436.1 273785 275590 R COGs: COG5421 Transposase; InterPro IPR002559; KEGG: cob:COB47_1677 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; IMG reference gene:2503956512; PFAM: Transposase DDE domain; transposase IS4 family protein complement(273785..275590) Sphaerochaeta coccoides DSM 17374 10494523 YP_004410860.1 CDS Spico_0245 NC_015436.1 276010 276903 D InterPro IPR018004; KEGG: dak:DaAHT2_2136 KilA, N-terminal/APSES-type HTH DNA-binding domain protein; PFAM: KilA, N-terminal/APSES-type HTH, DNA-binding; SPTR: KilA domain protein; IMG reference gene:2503956514; PFAM: KilA-N domain; KilA, /APSES-type HTH DNA-binding domain-containing protein 276010..276903 Sphaerochaeta coccoides DSM 17374 10494525 YP_004410861.1 CDS Spico_0246 NC_015436.1 277367 277567 D KEGG: bca:BCE_0370 hypothetical protein; SPTR: Cytosine-specific methyltransferase; IMG reference gene:2503956515; PFAM: Helix-turn-helix; hypothetical protein 277367..277567 Sphaerochaeta coccoides DSM 17374 10494526 YP_004410862.1 CDS Spico_0247 NC_015436.1 277564 279117 D InterPro IPR011639; KEGG: seu:SEQ_0757 modification methylase; PRIAM: Site-specific DNA-methyltransferase (adenine-specific); SPTR: uncharacterized protein; IMG reference gene:2503956516; PFAM: Ribosomal RNA adenine dimethylase; Eco57I restriction endonuclease; adenine-specific DNA-methyltransferase 277564..279117 Sphaerochaeta coccoides DSM 17374 10494527 YP_004410863.1 CDS Spico_0248 NC_015436.1 279059 279970 D InterPro IPR009528; KEGG: seu:SEQ_0758 type II restriction enzyme; PFAM: Restriction endonuclease, type II, BsuBI/PstI, C-terminal; PRIAM: Type II site-specific deoxyribonuclease; SPTR: type II restriction enzyme; IMG reference gene:2503956517; PFAM: BsuBI/PstI restriction endonuclease C-terminus; type II site-specific deoxyribonuclease 279059..279970 Sphaerochaeta coccoides DSM 17374 10494528 YP_004410864.1 CDS Spico_0249 NC_015436.1 280142 280891 R InterPro IPR013525; KEGG: tde:TDE0701 hypothetical protein; PFAM: ABC-2 type transporter; SPTR: Membrane protein, ; IMG reference gene:2503956518; PFAM: ABC-2 type transporter; ABC transporter complement(280142..280891) Sphaerochaeta coccoides DSM 17374 10494529 YP_004410865.1 CDS Spico_0250 NC_015436.1 280888 281613 R COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: tde:TDE0702 ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Polyamine-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; IMG reference gene:2503956519; PFAM: ABC transporter; polyamine-transporting ATPase complement(280888..281613) Sphaerochaeta coccoides DSM 17374 10494530 YP_004410866.1 CDS Spico_0251 NC_015436.1 281610 281837 R InterPro IPR006339:IPR007159; KEGG: tde:TDE0703 AbrB family transcriptional regulator; PFAM: Transcription regulator AbrB/SpoV, predicted; SMART: Transcription regulator AbrB/SpoV, predicted; SPTR: Transcriptional regulator, AbrB family; TIGRFAM: Transcription regulator AbrB; IMG reference gene:2503956520; PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family; AbrB family transcriptional regulator complement(281610..281837) Sphaerochaeta coccoides DSM 17374 10494531 YP_004410867.1 CDS Spico_0253 NC_015436.1 282269 282802 D KEGG: mem:Memar_2263 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956522; hypothetical protein 282269..282802 Sphaerochaeta coccoides DSM 17374 10494533 YP_004410868.1 CDS Spico_0254 NC_015436.1 282813 283169 D KEGG: ccb:Clocel_1507 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956523; hypothetical protein 282813..283169 Sphaerochaeta coccoides DSM 17374 10494534 YP_004410869.1 CDS Spico_0255 NC_015436.1 283166 283942 D InterPro IPR015018; KEGG: sss:SSUSC84_0626 hypothetical protein; PFAM: Protein of unknown function DUF1905; SPTR: uncharacterized protein; IMG reference gene:2503956524; PFAM: Domain of unknown function (DUF1905); hypothetical protein 283166..283942 Sphaerochaeta coccoides DSM 17374 10494535 YP_004410870.1 CDS Spico_0256 NC_015436.1 283960 284367 D COGs: COG2764 conserved hypothetical protein; KEGG: lsp:Bsph_4693 protein PhnB; SPTR: Protein phnB; IMG reference gene:2503956525; PFAM: 3-demethylubiquinone-9 3-methyltransferase; protein PhnB 283960..284367 Sphaerochaeta coccoides DSM 17374 10494536 YP_004410871.1 CDS Spico_0258 NC_015436.1 284799 285719 R COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR013096:IPR000005:IPR018060; KEGG: csh:Closa_3990 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; Cupin 2, conserved barrel; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator, AraC/XylS family; IMG reference gene:2503956527; PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator complement(284799..285719) Sphaerochaeta coccoides DSM 17374 10494538 YP_004410872.1 CDS Spico_0259 NC_015436.1 285870 287126 D COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: csh:Closa_3984 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: sugar-binding periplasmic protein; IMG reference gene:2503956528; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein 285870..287126 Sphaerochaeta coccoides DSM 17374 10494539 YP_004410873.1 CDS Spico_0260 NC_015436.1 287236 288144 D COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: csh:Closa_3983 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: ABC-type sugar transport system, permease component; IMG reference gene:2503956529; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 1 287236..288144 Sphaerochaeta coccoides DSM 17374 10494540 YP_004410874.1 CDS Spico_0261 NC_015436.1 288154 289023 D COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: csh:Closa_3982 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Sugar permease; IMG reference gene:2503956530; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 2 288154..289023 Sphaerochaeta coccoides DSM 17374 10494541 YP_004410875.1 CDS Spico_0262 NC_015436.1 289026 291053 D KEGG: cai:Caci_0892 tetratricopeptide TPR_4; SPTR: uncharacterized protein; IMG reference gene:2503956531; hypothetical protein 289026..291053 Sphaerochaeta coccoides DSM 17374 10494542 YP_004410876.1 CDS Spico_0263 NC_015436.1 291085 292167 D InterPro IPR002575; KEGG: csh:Closa_3988 aminoglycoside phosphotransferase; PFAM: Aminoglycoside phosphotransferase; SPTR: uncharacterized protein; IMG reference gene:2503956532; PFAM: Phosphotransferase enzyme family; aminoglycoside phosphotransferase 291085..292167 Sphaerochaeta coccoides DSM 17374 10494543 YP_004410877.1 CDS Spico_0265 NC_015436.1 292772 293419 D KEGG: cpy:Cphy_1854 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956534; hypothetical protein 292772..293419 Sphaerochaeta coccoides DSM 17374 10494545 YP_004410878.1 CDS Spico_0266 NC_015436.1 293564 295090 D COGs: COG0753 Catalase; InterPro IPR018028:IPR010582; KEGG: mla:Mlab_1574 hypothetical protein; PFAM: Catalase-related subgroup; Catalase-related immune responsive; PRIAM: Catalase; SPTR: Catalase; IMG reference gene:2503956535; PFAM: Catalase; Catalase-related immune-responsive; catalase 293564..295090 Sphaerochaeta coccoides DSM 17374 10494546 YP_004410879.1 CDS Spico_0267 NC_015436.1 295368 296669 D COGs: COG1373 ATPase (AAA+ superfamily); KEGG: swo:Swol_0027 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956536; hypothetical protein 295368..296669 Sphaerochaeta coccoides DSM 17374 10494547 YP_004410880.1 CDS Spico_0268 NC_015436.1 296824 298131 D COGs: COG0527 Aspartokinase; InterPro IPR001341:IPR001048; KEGG: ssm:Spirs_0574 aspartate kinase; PFAM: Aspartate/glutamate/uridylate kinase; SPTR: Aspartokinase; TIGRFAM: Aspartate kinase domain; IMG reference gene:2503956537; PFAM: Amino acid kinase; TIGRFAM: aspartate kinase; aspartate kinase 296824..298131 Sphaerochaeta coccoides DSM 17374 10494548 YP_004410881.1 CDS Spico_0269 NC_015436.1 298217 299311 R COGs: COG3839 ABC-type sugar transport systems ATPase components; InterPro IPR003439:IPR013611:IPR003593; KEGG: ssm:Spirs_0579 ABC transporter related protein; PFAM: ABC transporter-like; Transport-associated OB, type 2; PRIAM: Glycerol-3-phosphate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Sugar ABC transporter; IMG reference gene:2503956538; PFAM: ABC transporter; TOBE domain; carbohydrate ABC transporter ATP-binding protein complement(298217..299311) Sphaerochaeta coccoides DSM 17374 10494549 YP_004410882.1 CDS Spico_0270 NC_015436.1 299547 300053 D COGs: COG0252 L-asparaginase/ Glu-tRNAGln amidotransferase subunit D; InterPro IPR006034; KEGG: ade:Adeh_2142 asparaginase; PFAM: Asparaginase/glutaminase; SPTR: Asparaginase; IMG reference gene:2503956539; PFAM: Asparaginase; asparaginase/glutaminase 299547..300053 Sphaerochaeta coccoides DSM 17374 10494550 YP_004410883.1 CDS Spico_0271 NC_015436.1 300128 301798 D COGs: COG2759 Formyltetrahydrofolate synthetase; HAMAP: Formate-tetrahydrofolate ligase, FTHFS; InterPro IPR000559; KEGG: dhd:Dhaf_0555 formate--tetrahydrofolate ligase; PFAM: Formate-tetrahydrofolate ligase, FTHFS; PRIAM: Formate--tetrahydrofolate ligase; SPTR: Formate--tetrahydrofolate ligase; IMG reference gene:2503956540; PFAM: Formate--tetrahydrofolate ligase; formate-tetrahydrofolate ligase 300128..301798 Sphaerochaeta coccoides DSM 17374 10494551 YP_004410884.1 CDS Spico_0272 NC_015436.1 302992 304032 D COGs: COG1840 ABC-type Fe3+ transport system periplasmic component; InterPro IPR006059; KEGG: kol:Kole_1985 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein family 1; IMG reference gene:2503956542; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein 302992..304032 Sphaerochaeta coccoides DSM 17374 10494553 YP_004410885.1 CDS Spico_0273 NC_015436.1 304220 306451 D COGs: COG1178 ABC-type Fe3+ transport system permease component; InterPro IPR000515; KEGG: kol:Kole_1984 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503956543; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 304220..306451 Sphaerochaeta coccoides DSM 17374 10494554 YP_004410886.1 CDS Spico_0274 NC_015436.1 306462 307562 D COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003439:IPR013611:IPR003593; KEGG: kol:Kole_1983 ABC transporter related; PFAM: ABC transporter-like; Transport-associated OB, type 2; PRIAM: Polyamine-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC-type spermidine/putrescine transport systems, ATPase components; IMG reference gene:2503956544; PFAM: ABC transporter; TOBE domain; polyamine-transporting ATPase 306462..307562 Sphaerochaeta coccoides DSM 17374 10494555 YP_004410887.1 CDS Spico_0275 NC_015436.1 307737 308171 R InterPro IPR000835; KEGG: csh:Closa_1534 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator, MarR family; IMG reference gene:2503956545; regulatory protein MarR complement(307737..308171) Sphaerochaeta coccoides DSM 17374 10494556 YP_004410888.1 CDS Spico_0276 NC_015436.1 308168 309625 R COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR006076; KEGG: gpb:HDN1F_29420 similar to phytoene dehydrogenase; PFAM: FAD dependent oxidoreductase; SPTR: Phytoene dehydrogenase and related proteins; IMG reference gene:2503956546; PFAM: Flavin containing amine oxidoreductase; FAD dependent oxidoreductase complement(308168..309625) Sphaerochaeta coccoides DSM 17374 10494557 YP_004410889.1 CDS Spico_0277 NC_015436.1 310059 311984 D COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR000873; KEGG: ssm:Spirs_3695 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Long-chain-fatty-acid--CoA ligase; SPTR: uncharacterized protein; IMG reference gene:2503956547; PFAM: AMP-binding enzyme; long-chain-fatty-acid--CoA ligase 310059..311984 Sphaerochaeta coccoides DSM 17374 10494558 YP_004410890.1 CDS Spico_0278 NC_015436.1 312310 312969 D KEGG: llo:LLO_3092 homologous to SidE substrate of Dot/Icm secretion system; SPTR: Homologous to SidE substrate of Dot/Icm secretion system; IMG reference gene:2503956548; hypothetical protein 312310..312969 Sphaerochaeta coccoides DSM 17374 10494559 YP_004410891.1 CDS Spico_0279 NC_015436.1 312971 314212 D KEGG: ssm:Spirs_1518 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956549; hypothetical protein 312971..314212 Sphaerochaeta coccoides DSM 17374 10494560 YP_004410892.1 CDS Spico_0280 NC_015436.1 314323 315564 D COGs: COG1482 Phosphomannose isomerase; InterPro IPR001250; KEGG: dol:Dole_2015 mannose-6-phosphate isomerase, class I; PFAM: Mannose-6-phosphate isomerase, type I; PRIAM: Mannose-6-phosphate isomerase; SPTR: Mannose-6-phosphate isomerase, class I; TIGRFAM: Mannose-6-phosphate isomerase, type I; IMG reference gene:2503956550; PFAM: Phosphomannose isomerase type I; TIGRFAM: mannose-6-phosphate isomerase, class I; mannose-6-phosphate isomerase 314323..315564 Sphaerochaeta coccoides DSM 17374 10494561 YP_004410893.1 CDS Spico_0281 NC_015436.1 315612 316307 D COGs: COG0847 DNA polymerase III epsilon subunit and related 3'-5' exonuclease; InterPro IPR006054:IPR013520:IPR006055; KEGG: vpr:Vpar_0406 exonuclease RNase T and DNA polymerase III; PFAM: Exonuclease, RNase T/DNA polymerase III; SMART: Exonuclease; SPTR: Exonuclease; TIGRFAM: DNA polymerase III, epsilon subunit; IMG reference gene:2503956551; PFAM: Exonuclease; DNA polymerase III subunit epsilon 315612..316307 Sphaerochaeta coccoides DSM 17374 10494562 YP_004410894.1 CDS Spico_0282 NC_015436.1 316296 317216 R InterPro IPR000326; KEGG: ssm:Spirs_0904 phosphoesterase PA-phosphatase related protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; SPTR: Membrane-associated phospholipid phosphatase; IMG reference gene:2503956552; PFAM: PAP2 superfamily; phosphoesterase PA-phosphatase-like protein complement(316296..317216) Sphaerochaeta coccoides DSM 17374 10494563 YP_004410895.1 CDS Spico_0283 NC_015436.1 317619 318692 D COGs: COG0482 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain; HAMAP: tRNA-specific 2-thiouridylase; InterPro IPR004506; KEGG: emi:Emin_0088 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA-specific 2-thiouridylase; SPTR: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; TIGRFAM: tRNA-specific 2-thiouridylase; IMG reference gene:2503956554; PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; tRNA-specific 2-thiouridylase mnmA 317619..318692 Sphaerochaeta coccoides DSM 17374 10494565 YP_004410896.1 CDS Spico_0284 NC_015436.1 318803 319612 D COGs: COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; HAMAP: Glucosamine-6-phosphate isomerase; InterPro IPR004547:IPR006148; KEGG: pdi:BDI_3568 glucosamine-6-phosphate deaminase; PFAM: Glucosamine/galactosamine-6-phosphate isomerase; PRIAM: Glucosamine-6-phosphate deaminase; SPTR: Glucosamine-6-phosphate deaminase; TIGRFAM: Glucosamine-6-phosphate isomerase; IMG reference gene:2503956555; PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: glucosamine-6-phosphate isomerase; glucosamine-6-phosphate deaminase 318803..319612 Sphaerochaeta coccoides DSM 17374 10494566 YP_004410897.1 CDS Spico_0285 NC_015436.1 319620 320438 R COGs: COG0584 Glycerophosphoryl diester phosphodiesterase; InterPro IPR004129; KEGG: dge:Dgeo_1506 glycerophosphoryl diester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase; SPTR: Glycerophosphoryl diester phosphodiesterase; IMG reference gene:2503956556; PFAM: Glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase complement(319620..320438) Sphaerochaeta coccoides DSM 17374 10494567 YP_004410898.1 CDS Spico_0286 NC_015436.1 320525 321298 R COGs: COG0565 rRNA methylase; InterPro IPR001537; KEGG: ssm:Spirs_2304 RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase, SpoU; SPTR: RNA methyltransferase, TrmH family, group 1; IMG reference gene:2503956557; PFAM: SpoU rRNA Methylase; TIGRFAM: RNA methyltransferase, TrmH family, group 1; tRNA/rRNA methyltransferase SpoU complement(320525..321298) Sphaerochaeta coccoides DSM 17374 10494568 YP_004410899.1 CDS Spico_0287 NC_015436.1 321307 322557 D COGs: COG0628 permease; InterPro IPR002549; KEGG: ssm:Spirs_2291 protein of unknown function UPF0118; PFAM: Uncharacterised protein family UPF0118; SPTR: uncharacterized protein; IMG reference gene:2503956558; PFAM: Domain of unknown function DUF20; hypothetical protein 321307..322557 Sphaerochaeta coccoides DSM 17374 10494569 YP_004410900.1 CDS Spico_0288 NC_015436.1 322581 323564 D COGs: COG1194 A/G-specific DNA glycosylase; InterPro IPR003265; KEGG: mem:Memar_1721 HhH-GPD family protein; PFAM: HhH-GPD domain; SMART: HhH-GPD domain; SPTR: HhH-GPD family protein; IMG reference gene:2503956559; PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; HhH-GPD family protein 322581..323564 Sphaerochaeta coccoides DSM 17374 10494570 YP_004410901.1 CDS Spico_0289 NC_015436.1 323584 324513 R InterPro IPR006750; KEGG: cpy:Cphy_1299 hypothetical protein; PFAM: Protein of unknown function DUF606; SPTR: uncharacterized protein; IMG reference gene:2503956560; PFAM: Protein of unknown function, DUF606; hypothetical protein complement(323584..324513) Sphaerochaeta coccoides DSM 17374 10494571 YP_004410902.1 CDS Spico_0290 NC_015436.1 324682 325284 D COGs: COG0560 Phosphoserine phosphatase; InterPro IPR011863:IPR005834; KEGG: sta:STHERM_c21790 hypothetical protein; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: uncharacterized protein; TIGRFAM: Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein; IMG reference gene:2503956561; TIGRFAM: phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein; bifunctional phosphoserine phosphatase/homoserine phosphotransferase 324682..325284 Sphaerochaeta coccoides DSM 17374 10494572 YP_004410903.1 CDS Spico_0291 NC_015436.1 325523 325891 D COGs: COG1734 DnaK suppressor protein; InterPro IPR000962; KEGG: ssm:Spirs_0464 transcriptional regulator, TraR/DksA family; SPTR: C4 zinc finger domain protein, DksA/TraR family; IMG reference gene:2503956562; PFAM: Prokaryotic dksA/traR C4-type zinc finger; TraR/DksA family transcriptional regulator 325523..325891 Sphaerochaeta coccoides DSM 17374 10494573 YP_004410904.1 CDS Spico_0292 NC_015436.1 325935 326615 R COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001279; KEGG: gka:GK2439 hypothetical protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; SPTR: Beta-lactamase domain protein; IMG reference gene:2503956563; PFAM: Metallo-beta-lactamase superfamily; beta-lactamase domain-containing protein complement(325935..326615) Sphaerochaeta coccoides DSM 17374 10494574 YP_004410905.1 CDS Spico_0293 NC_015436.1 326618 327199 R InterPro IPR005580; KEGG: ssm:Spirs_0468 DbpA RNA-binding domain protein; PFAM: DbpA, RNA-binding; SPTR: DbpA RNA binding domain protein; IMG reference gene:2503956564; PFAM: DbpA RNA binding domain; DbpA RNA-binding domain-containing protein complement(326618..327199) Sphaerochaeta coccoides DSM 17374 10494575 YP_004410906.1 CDS Spico_0294 NC_015436.1 327490 328680 D KEGG: ssm:Spirs_0472 hypothetical protein; SPTR: Chromosome assembly protein homolog; IMG reference gene:2503956565; hypothetical protein 327490..328680 Sphaerochaeta coccoides DSM 17374 10494576 YP_004410907.1 CDS Spico_0295 NC_015436.1 328677 330191 D COGs: COG1559 periplasmic solute-binding protein; InterPro IPR003770; KEGG: msv:Mesil_0225 aminodeoxychorismate lyase; PFAM: Uncharacterised protein family UPF0755; SPTR: Aminodeoxychorismate lyase; TIGRFAM: Uncharacterised protein family UPF0755; IMG reference gene:2503956566; PFAM: YceG-like family; TIGRFAM: conserved hypothetical protein, YceG family; aminodeoxychorismate lyase 328677..330191 Sphaerochaeta coccoides DSM 17374 10494577 YP_004410908.1 CDS Spico_0296 NC_015436.1 330207 331004 D COGs: COG3315 O-Methyltransferase involved in polyketide biosynthesis; KEGG: ols:Olsu_0657 tetracenomycin polyketide synthesis O-methyltransferase TcmP; SPTR: uncharacterized protein; IMG reference gene:2503956567; PFAM: Leucine carboxyl methyltransferase; tetracenomycin polyketide synthesis O-methyltransferase TcmP 330207..331004 Sphaerochaeta coccoides DSM 17374 10494578 YP_004410909.1 CDS Spico_0297 NC_015436.1 331356 333446 D COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641; KEGG: fjo:Fjoh_0727 patatin; PFAM: Patatin/Phospholipase A2-related; SPTR: patatin-like phospholipase; IMG reference gene:2503956569; PFAM: Patatin-like phospholipase; patatin 331356..333446 Sphaerochaeta coccoides DSM 17374 10494580 YP_004410910.1 CDS Spico_0298 NC_015436.1 333436 334053 R COGs: COG1636 conserved hypothetical protein; InterPro IPR003828; KEGG: ssm:Spirs_2754 protein of unknown function DUF208; PFAM: Protein of unknown function DUF208; SPTR: uncharacterized protein; IMG reference gene:2503956570; PFAM: Uncharacterized BCR, COG1636; hypothetical protein complement(333436..334053) Sphaerochaeta coccoides DSM 17374 10494581 YP_004410911.1 CDS Spico_0299 NC_015436.1 334143 335042 D KEGG: ccb:Clocel_0599 TPR repeat-containing protein; SPTR: TPR repeat-containing protein; IMG reference gene:2503956571; hypothetical protein 334143..335042 Sphaerochaeta coccoides DSM 17374 10494582 YP_004410912.1 CDS Spico_0300 NC_015436.1 335078 336610 D COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; InterPro IPR001736; KEGG: cpe:CPE0365 cardiolipin synthetase; PFAM: Phospholipase D/Transphosphatidylase; SMART: Phospholipase D/Transphosphatidylase; SPTR: uncharacterized protein; IMG reference gene:2503956572; PFAM: Phospholipase D Active site motif; phospholipase D/Transphosphatidylase 335078..336610 Sphaerochaeta coccoides DSM 17374 10494583 YP_004410913.1 CDS Spico_0301 NC_015436.1 336636 337526 R COGs: COG1814 Uncharacterized membrane protein; InterPro IPR008217; KEGG: brm:Bmur_1173 protein of unknown function DUF125 transmembrane; PFAM: Domain of unknown function DUF125, transmembrane; SPTR: uncharacterized protein; IMG reference gene:2503956573; PFAM: VIT family; hypothetical protein complement(336636..337526) Sphaerochaeta coccoides DSM 17374 10494584 YP_004410914.1 CDS Spico_0302 NC_015436.1 337758 338042 D InterPro IPR000831; KEGG: sta:STHERM_c18770 hypothetical protein; PFAM: Trp repressor; SPTR: uncharacterized protein; IMG reference gene:2503956574; PFAM: Trp repressor protein; TIGRFAM: trp operon repressor, proteobacterial; Trp repressor 337758..338042 Sphaerochaeta coccoides DSM 17374 10494585 YP_004410915.1 CDS Spico_0303 NC_015436.1 338152 339180 D InterPro IPR005242; KEGG: cpy:Cphy_1959 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956575; PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein; hypothetical protein 338152..339180 Sphaerochaeta coccoides DSM 17374 10494586 YP_004410916.1 CDS Spico_0304 NC_015436.1 339240 340448 D COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: bfs:BF3235 glycosyl transferase; PFAM: Glycosyl transferase, group 1; SPTR: uncharacterized protein; IMG reference gene:2503956576; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase 339240..340448 Sphaerochaeta coccoides DSM 17374 10494587 YP_004410917.1 CDS Spico_0305 NC_015436.1 340512 342416 R COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR011545:IPR001650:IPR014001; KEGG: mba:Mbar_A0145 ATP-dependent RNA helicase; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: ATP-dependent RNA helicase; IMG reference gene:2503956577; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; DEAD/DEAH box helicase complement(340512..342416) Sphaerochaeta coccoides DSM 17374 10494588 YP_004410918.1 CDS Spico_0306 NC_015436.1 342509 343462 R KEGG: tde:TDE1337 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956578; PFAM: Protein of unknown function (DUF2804); hypothetical protein complement(342509..343462) Sphaerochaeta coccoides DSM 17374 10494589 YP_004410919.1 CDS Spico_0307 NC_015436.1 343548 345170 R InterPro IPR000297; KEGG: ssm:Spirs_1830 PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SPTR: uncharacterized protein; IMG reference gene:2503956579; PFAM: PPIC-type PPIASE domain; PpiC-type peptidyl-prolyl cis-trans isomerase complement(343548..345170) Sphaerochaeta coccoides DSM 17374 10494590 YP_004410920.1 CDS Spico_0308 NC_015436.1 345290 346216 R KEGG: dhd:Dhaf_0871 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956580; hypothetical protein complement(345290..346216) Sphaerochaeta coccoides DSM 17374 10494591 YP_004410921.1 CDS Spico_0309 NC_015436.1 346700 347104 R KEGG: vcn:VOLCADRAFT_103453 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956582; hypothetical protein complement(346700..347104) Sphaerochaeta coccoides DSM 17374 10494593 YP_004410922.1 CDS Spico_0310 NC_015436.1 347357 348376 D COGs: COG1840 ABC-type Fe3+ transport system periplasmic component; InterPro IPR006059; KEGG: aco:Amico_1577 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: ABC transporter, periplasmic binding protein, thiB subfamily; IMG reference gene:2503956583; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein 347357..348376 Sphaerochaeta coccoides DSM 17374 10494594 YP_004410923.1 CDS Spico_0311 NC_015436.1 348529 350178 D COGs: COG1178 ABC-type Fe3+ transport system permease component; InterPro IPR000515; KEGG: aco:Amico_1576 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503956584; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 348529..350178 Sphaerochaeta coccoides DSM 17374 10494595 YP_004410924.1 CDS Spico_0312 NC_015436.1 350194 351279 D COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003439:IPR013611:IPR003593; KEGG: csh:Closa_0645 ABC transporter related protein; PFAM: ABC transporter-like; Transport-associated OB, type 2; PRIAM: Polyamine-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; IMG reference gene:2503956585; PFAM: ABC transporter; TOBE domain; polyamine-transporting ATPase 350194..351279 Sphaerochaeta coccoides DSM 17374 10494596 YP_004410925.1 CDS Spico_0313 NC_015436.1 351321 352127 D COGs: COG0657 Esterase/lipase; KEGG: pjd:Pjdr2_5261 pectin acetylesterase; SPTR: Endo-1,4-beta-xylanase B; IMG reference gene:2503956586; PFAM: Prolyl oligopeptidase; alpha/beta hydrolase fold; pectin acetylesterase 351321..352127 Sphaerochaeta coccoides DSM 17374 10494597 YP_004410926.1 CDS Spico_0314 NC_015436.1 352232 353209 D KEGG: acl:ACL_0438 Fic-domain-containing protein; SPTR: Fic-domain containing protein; IMG reference gene:2503956587; hypothetical protein 352232..353209 Sphaerochaeta coccoides DSM 17374 10494598 YP_004410927.1 CDS Spico_0315 NC_015436.1 353199 353984 R COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: ele:Elen_0663 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-); IMG reference gene:2503956588; PFAM: ABC transporter; amino acid ABC transporter ATP-binding protein complement(353199..353984) Sphaerochaeta coccoides DSM 17374 10494599 YP_004410928.1 CDS Spico_0316 NC_015436.1 353981 354616 R COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: tjr:TherJR_0418 polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease, 3-TM domain, His/Glu/Gln/Arg/opine family; IMG reference gene:2503956589; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family; amino acid ABC transporter permease complement(353981..354616) Sphaerochaeta coccoides DSM 17374 10494600 YP_004410929.1 CDS Spico_0317 NC_015436.1 354685 355491 R COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001638; KEGG: tjr:TherJR_0419 extracellular solute-binding protein family 3; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; SPTR: Extracellular solute-binding protein family 3; IMG reference gene:2503956590; PFAM: Bacterial extracellular solute-binding proteins, family 3; amino acid ABC transporter substrate-binding protein complement(354685..355491) Sphaerochaeta coccoides DSM 17374 10494601 YP_004410930.1 CDS Spico_0318 NC_015436.1 355828 356970 D COGs: COG1883 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit; InterPro IPR005661; KEGG: csh:Closa_2394 sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; PRIAM: Oxaloacetate decarboxylase; SPTR: Oxaloacetate decarboxylase, beta subunit; TIGRFAM: Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; IMG reference gene:2503956591; PFAM: subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; sodium ion-translocating decarboxylase subunit beta 355828..356970 Sphaerochaeta coccoides DSM 17374 10494602 YP_004410931.1 CDS Spico_0319 NC_015436.1 356981 357109 D InterPro IPR005899; PFAM: Sodium ion-translocating decarboxylase; SPTR: uncharacterized protein; IMG reference gene:2503956592; PFAM: Oxaloacetate decarboxylase, gamma chain; sodium pump decarboxylase gamma subunit 356981..357109 Sphaerochaeta coccoides DSM 17374 10494603 YP_004410932.1 CDS Spico_0320 NC_015436.1 357727 358266 D COGs: COG0440 Acetolactate synthase small (regulatory) subunit; InterPro IPR002912:IPR019455:IPR004789; KEGG: cth:Cthe_2517 acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit, C-terminal; Amino acid-binding ACT; SPTR: Acetolactate synthase, small subunit; TIGRFAM: Acetolactate synthase, small subunit; IMG reference gene:2503956593; PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit; acetolactate synthase small subunit 357727..358266 Sphaerochaeta coccoides DSM 17374 10494604 YP_004410933.1 CDS Spico_0321 NC_015436.1 358385 359377 D COGs: COG0059 Ketol-acid reductoisomerase; HAMAP: Acetohydroxy acid isomeroreductase; InterPro IPR013023:IPR013116:IPR000506; KEGG: ccb:Clocel_1325 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase, catalytic; Acetohydroxy acid isomeroreductase C-terminal; PRIAM: Ketol-acid reductoisomerase; SPTR: Ketol-acid reductoisomerase; TIGRFAM: Acetohydroxy acid isomeroreductase; IMG reference gene:2503956594; PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase; ketol-acid reductoisomerase 358385..359377 Sphaerochaeta coccoides DSM 17374 10494605 YP_004410934.1 CDS Spico_0322 NC_015436.1 359498 361117 D COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891:IPR013709:IPR005671; KEGG: amt:Amet_3458 2-isopropylmalate synthase; PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; PRIAM: 2-isopropylmalate synthase; SMART: 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; SPTR: 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase, bacterial type; IMG reference gene:2503956595; PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase, bacterial type; 2-isopropylmalate synthase 359498..361117 Sphaerochaeta coccoides DSM 17374 10494606 YP_004410935.1 CDS Spico_0323 NC_015436.1 361110 362729 D COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891:IPR013709:IPR005675; KEGG: ccb:Clocel_1321 2-isopropylmalate synthase/homocitrate synthase; PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; PRIAM: (R)-citramalate synthase; SMART: 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; SPTR: 2-isopropylmalate synthase/homocitrate synthase; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase-related; IMG reference gene:2503956596; PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase; 2-isopropylmalate synthase 361110..362729 Sphaerochaeta coccoides DSM 17374 10494607 YP_004410936.1 CDS Spico_0324 NC_015436.1 362743 364011 D COGs: COG0065 3-isopropylmalate dehydratase large subunit; HAMAP: Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic; InterPro IPR011826:IPR001030:IPR011823:IPR006251; KEGG: ckl:CKL_2159 3-isopropylmalate dehydratase large subunit; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; SPTR: 3-isopropylmalate dehydratase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit, prokaryotic; Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic; Homoaconitase/3-isopropylmalate dehydratase, large subunit, subgroup; IMG reference gene:2503956597; PFAM: Aconitase (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit; homoaconitate hydratase; 3-isopropylmalate dehydratase large subunit 362743..364011 Sphaerochaeta coccoides DSM 17374 10494608 YP_004410937.1 CDS Spico_0325 NC_015436.1 364013 364537 D COGs: COG0066 3-isopropylmalate dehydratase small subunit; HAMAP: 3-isopropylmalate dehydratase small subunit; InterPro IPR000573:IPR011824:IPR011827; KEGG: ere:EUBREC_1995 3-isopropylmalate dehydratase small subunit; PFAM: Aconitase A/isopropylmalate dehydratase small subunit, swivel; PRIAM: (R)-2-methylmalate dehydratase; SPTR: 3-isopropylmalate dehydratase, small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit, bacterial-like; 3-isopropylmalate dehydratase, small subunit, subgroup; IMG reference gene:2503956598; PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; 3-isopropylmalate dehydratase small subunit 364013..364537 Sphaerochaeta coccoides DSM 17374 10494609 YP_004410938.1 CDS Spico_0326 NC_015436.1 364534 365607 D COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase; HAMAP: Isopropylmalate dehydrogenase; InterPro IPR004429:IPR001804; KEGG: cbe:Cbei_0216 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; PRIAM: 3-isopropylmalate dehydrogenase; SPTR: 3-isopropylmalate dehydrogenase; TIGRFAM: Isopropylmalate dehydrogenase; IMG reference gene:2503956599; PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 364534..365607 Sphaerochaeta coccoides DSM 17374 10494610 YP_004410939.1 CDS Spico_0327 NC_015436.1 365690 367423 D COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; HAMAP: Dihydroxy-acid dehydratase; InterPro IPR004404:IPR000581; KEGG: amt:Amet_3401 dihydroxy-acid dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; PRIAM: Dihydroxy-acid dehydratase; SPTR: Dihydroxy-acid dehydratase; TIGRFAM: Dihydroxy-acid dehydratase; IMG reference gene:2503956600; PFAM: Dehydratase; TIGRFAM: dihydroxy-acid dehydratase; dihydroxyacid dehydratase 365690..367423 Sphaerochaeta coccoides DSM 17374 10494611 YP_004410940.1 CDS Spico_0328 NC_015436.1 367466 369139 D COGs: COG0028 Thiamine pyrophosphate-requiring protein; InterPro IPR012001:IPR012000:IPR011766:IPR012846; KEGG: cpy:Cphy_3347 acetolactate synthase, large subunit, biosynthetic type; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; PRIAM: Acetolactate synthase; SPTR: Acetolactate synthase; TIGRFAM: Acetolactate synthase, large subunit, biosynthetic; IMG reference gene:2503956601; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; acetolactate synthase large subunit 367466..369139 Sphaerochaeta coccoides DSM 17374 10494612 YP_004410941.1 CDS Spico_0329 NC_015436.1 369170 370669 R InterPro IPR011435; KEGG: eel:EUBELI_01841 hypothetical protein; PFAM: Protein of unknown function DUF1538; SPTR: uncharacterized protein; IMG reference gene:2503956602; PFAM: Protein of unknown function (DUF1538); hypothetical protein complement(369170..370669) Sphaerochaeta coccoides DSM 17374 10494613 YP_004410942.1 CDS Spico_0330 NC_015436.1 370923 372170 R InterPro IPR011701; KEGG: cno:NT01CX_1080 major facilitator superfamily protein; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily protein; IMG reference gene:2503956603; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein complement(370923..372170) Sphaerochaeta coccoides DSM 17374 10494614 YP_004410943.1 CDS Spico_0331 NC_015436.1 372167 372991 R COGs: COG0561 hydrolase of the HAD superfamily; InterPro IPR013200:IPR000150:IPR006379; KEGG: cbe:Cbei_0458 Cof-like hydrolase; PFAM: HAD superfamily hydrolase-like, type 3; SPTR: Cof-like hydrolase; TIGRFAM: Cof protein; HAD-superfamily hydrolase, subfamily IIB; IMG reference gene:2503956604; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB; cof family hydrolase complement(372167..372991) Sphaerochaeta coccoides DSM 17374 10494615 YP_004410944.1 CDS Spico_0332 NC_015436.1 373214 376066 R COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR011110:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Listeria/Bacterioides repeat; Two component regulator propeller; Regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; TIGRFAM: Listeria/Bacterioides repeat; IMG reference gene:2503956605; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; TIGRFAM: Listeria/Bacterioides repeat; cell wall/surface repeat protein complement(373214..376066) Sphaerochaeta coccoides DSM 17374 10494616 YP_004410945.1 CDS Spico_0333 NC_015436.1 376385 378745 R COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR011110:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Listeria/Bacterioides repeat; Two component regulator propeller; Regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; IMG reference gene:2503956606; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; hypothetical protein complement(376385..378745) Sphaerochaeta coccoides DSM 17374 10494617 YP_004410946.1 CDS Spico_0334 NC_015436.1 379215 380963 R COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR000408; KEGG: ttm:Tthe_2617 S-layer domain protein; PFAM: Listeria/Bacterioides repeat; Regulator of chromosome condensation, RCC1; SPTR: Alpha-tubulin suppressor and related RCC1 domain-containing protein-like protein; IMG reference gene:2503956607; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; hypothetical protein complement(379215..380963) Sphaerochaeta coccoides DSM 17374 10494618 YP_004410947.1 CDS Spico_0335 NC_015436.1 381522 382511 D COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR001761; KEGG: ssm:Spirs_3421 periplasmic binding protein/LacI transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; SPTR: Periplasmic binding protein/LacI transcriptional regulator; IMG reference gene:2503956608; PFAM: family; monosaccharide ABC transporter substrate-binding protein, CUT2 family 381522..382511 Sphaerochaeta coccoides DSM 17374 10494619 YP_004410948.1 CDS Spico_0336 NC_015436.1 382593 384125 D COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: ssm:Spirs_3420 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; IMG reference gene:2503956609; PFAM: ABC transporter; monosaccharide ABC transporter ATP-binding protein, CUT2 family 382593..384125 Sphaerochaeta coccoides DSM 17374 10494620 YP_004410949.1 CDS Spico_0337 NC_015436.1 384122 385210 D COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: ssm:Spirs_3419 inner-membrane translocator; PFAM: ABC transporter permease; SPTR: Inner-membrane translocator; IMG reference gene:2503956610; PFAM: Branched-chain amino acid transport system / permease component; monosaccharide ABC transporter membrane protein, CUT2 family 384122..385210 Sphaerochaeta coccoides DSM 17374 10494621 YP_004410950.1 CDS Spico_0338 NC_015436.1 385207 386247 D COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: ssm:Spirs_3418 inner-membrane translocator; PFAM: ABC transporter permease; SPTR: Inner-membrane translocator; IMG reference gene:2503956611; PFAM: Branched-chain amino acid transport system / permease component; monosaccharide ABC transporter membrane protein, CUT2 family 385207..386247 Sphaerochaeta coccoides DSM 17374 10494622 YP_004410951.1 CDS Spico_0339 NC_015436.1 386262 387845 D COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484; KEGG: csh:Closa_0680 ATPase BadF/BadG/BcrA/BcrD type; PFAM: Carbohydrate kinase, FGGY, N-terminal; SPTR: Sugar (Pentulose and hexulose) kinases; IMG reference gene:2503956612; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; Carbohydrate kinase, FGGY 386262..387845 Sphaerochaeta coccoides DSM 17374 10494623 YP_004410952.1 CDS Spico_0340 NC_015436.1 387944 389437 D COGs: COG3534 Alpha-L-arabinofuranosidase; InterPro IPR010720; KEGG: sta:STHERM_c14770 alpha-N-arabinofuranosidase; PFAM: Alpha-L-arabinofuranosidase, C-terminal; PRIAM: Alpha-N-arabinofuranosidase; SMART: Alpha-L-arabinofuranosidase, C-terminal; SPTR: Alpha-N-arabinofuranosidase; IMG reference gene:2503956613; PFAM: Alpha-L-arabinofuranosidase C-terminus; alpha-N-arabinofuranosidase 387944..389437 Sphaerochaeta coccoides DSM 17374 10494624 YP_004410953.1 CDS Spico_0341 NC_015436.1 389535 390590 R COGs: COG1609 Transcriptional regulators; InterPro IPR000843; KEGG: sta:STHERM_c20570 transcriptional regulatory protein; PFAM: HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI; SPTR: Transcriptional regulatory protein; IMG reference gene:2503956614; PFAM: Bacterial regulatory proteins, lacI family; family; LacI family transcriptional regulator complement(389535..390590) Sphaerochaeta coccoides DSM 17374 10494625 YP_004410954.1 CDS Spico_0342 NC_015436.1 390948 392432 D COGs: COG2160 L-arabinose isomerase; HAMAP: L-arabinose isomerase; InterPro IPR003762; KEGG: ccb:Clocel_1254 L-arabinose isomerase; PFAM: L-arabinose isomerase; PRIAM: L-arabinose isomerase; SPTR: uncharacterized protein; IMG reference gene:2503956615; PFAM: L-arabinose isomerase; L-arabinose isomerase C-terminal domain; L-arabinose isomerase 390948..392432 Sphaerochaeta coccoides DSM 17374 10494626 YP_004410955.1 CDS Spico_0343 NC_015436.1 392471 393166 D COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: cpf:CPF_0648 L-ribulose-5-phosphate 4-epimerase; PFAM: Class II aldolase/adducin, N-terminal; PRIAM: L-ribulose-5-phosphate 4-epimerase; SPTR: L-ribulose-5-phosphate 4-epimerase; IMG reference gene:2503956616; PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase; L-ribulose 5-phosphate 4-epimerase 392471..393166 Sphaerochaeta coccoides DSM 17374 10494627 YP_004410956.1 CDS Spico_0344 NC_015436.1 393326 396013 R COGs: COG1454 Alcohol dehydrogenase class IV; InterPro IPR015590:IPR001670; KEGG: cyj:Cyan7822_1604 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type; Aldehyde dehydrogenase domain; PRIAM: Acetaldehyde dehydrogenase (acetylating); SPTR: Iron-containing alcohol dehydrogenase; IMG reference gene:2503956617; PFAM: Aldehyde dehydrogenase; Iron-containing alcohol dehydrogenase; alcohol dehydrogenase complement(393326..396013) Sphaerochaeta coccoides DSM 17374 10494628 YP_004410957.1 CDS Spico_0345 NC_015436.1 396268 397527 R COGs: COG4769 membrane protein; InterPro IPR010898; KEGG: tde:TDE1926 hypothetical protein; PFAM: Heptaprenyl diphosphate synthase component I; SPTR: Membrane protein, ; IMG reference gene:2503956618; PFAM: Heptaprenyl diphosphate synthase component I; heptaprenyl diphosphate synthase component I complement(396268..397527) Sphaerochaeta coccoides DSM 17374 10494629 YP_004410958.1 CDS Spico_0346 NC_015436.1 397937 398716 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: ssm:Spirs_2695 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SPTR: Transcriptional regulatory protein; IMG reference gene:2503956619; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator 397937..398716 Sphaerochaeta coccoides DSM 17374 10494630 YP_004410959.1 CDS Spico_0347 NC_015436.1 398756 399484 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: ssm:Spirs_2695 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SPTR: Transcriptional regulatory protein; IMG reference gene:2503956620; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator 398756..399484 Sphaerochaeta coccoides DSM 17374 10494631 YP_004410960.1 CDS Spico_0348 NC_015436.1 399481 401085 D COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: bcv:Bcav_1275 histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Histidine kinase; IMG reference gene:2503956621; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase 399481..401085 Sphaerochaeta coccoides DSM 17374 10494632 YP_004410961.1 CDS Spico_0349 NC_015436.1 401221 402639 D COGs: COG0469 Pyruvate kinase; InterPro IPR015793:IPR015795:IPR001697; KEGG: cob:COB47_1291 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, C-terminal-like; PRIAM: Pyruvate kinase; SPTR: Pyruvate kinase; TIGRFAM: Pyruvate kinase; IMG reference gene:2503956622; PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase; pyruvate kinase 401221..402639 Sphaerochaeta coccoides DSM 17374 10494633 YP_004410962.1 CDS Spico_0350 NC_015436.1 402774 404567 R COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR007329:IPR003953:IPR010960; KEGG: ssm:Spirs_3607 flavocytochrome c; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; FMN-binding; PRIAM: Succinate dehydrogenase; SMART: FMN-binding; SPTR: Flavocytochrome c; TIGRFAM: Flavocytochrome c; IMG reference gene:2503956623; PFAM: FAD binding domain; FMN-binding domain; TIGRFAM: flavocytochrome c; flavocytochrome c complement(402774..404567) Sphaerochaeta coccoides DSM 17374 10494634 YP_004410963.1 CDS Spico_0351 NC_015436.1 404887 406020 D COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; KEGG: dhd:Dhaf_2612 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956624; PFAM: NMT1/THI5 like; hypothetical protein 404887..406020 Sphaerochaeta coccoides DSM 17374 10494635 YP_004410964.1 CDS Spico_0352 NC_015436.1 406017 406832 D COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: dhd:Dhaf_2613 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport system inner membrane component; IMG reference gene:2503956625; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 406017..406832 Sphaerochaeta coccoides DSM 17374 10494636 YP_004410965.1 CDS Spico_0353 NC_015436.1 406829 407461 D COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: dsa:Desal_1874 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: uncharacterized protein; IMG reference gene:2503956626; PFAM: ABC transporter; Fe(3+)-transporting ATPase 406829..407461 Sphaerochaeta coccoides DSM 17374 10494637 YP_004410966.1 CDS Spico_0354 NC_015436.1 407592 409325 R COGs: COG4624 Iron only hydrogenase large subunit C-terminal domain; InterProIPR001041:IPR019574:IPR001450:IPR004108:IPR 003149:IPR013352; KEGG: cbt:CLH_1644 iron hydrogenase 1; PFAM: Iron hydrogenase, large subunit, C-terminal; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Ferredoxin; 4Fe-4S binding domain; Iron hydrogenase, small subunit-like; PRIAM: Ferredoxin hydrogenase; SMART: Iron hydrogenase, small subunit-like; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; SPTR: Hydrogenase, Fe-only; TIGRFAM: Iron hydrogenase, subset; IMG reference gene:2503956627; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Iron only hydrogenase large subunit, C-terminal domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Iron hydrogenase small subunit; TIGRFAM: hydrogenase, Fe-only; hydrogenase, Fe-only complement(407592..409325) Sphaerochaeta coccoides DSM 17374 10494638 YP_004410967.1 CDS Spico_0355 NC_015436.1 409319 411166 R COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR019575:IPR013027; KEGG: cbt:CLH_1645 glutamate synthase (NADPH) small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; PRIAM: Glutamate synthase (NADPH); SMART: NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; SPTR: NADH ubiquinone oxidoreductase, F subunit, iron sulfur binding; IMG reference gene:2503956628; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Pyridine nucleotide-disulphide oxidoreductase; glutamate synthase (NADPH) complement(409319..411166) Sphaerochaeta coccoides DSM 17374 10494639 YP_004410968.1 CDS Spico_0356 NC_015436.1 411507 412094 R COGs: COG5523 integral membrane protein; InterPro IPR010380; KEGG: clj:CLJU_c32220 hypothetical protein; PFAM: Protein of unknown function DUF975; SPTR: uncharacterized protein; IMG reference gene:2503956629; PFAM: Protein of unknown function (DUF975); hypothetical protein complement(411507..412094) Sphaerochaeta coccoides DSM 17374 10494640 YP_004410969.1 CDS Spico_0358 NC_015436.1 412416 413024 D COGs: COG2094 3-methyladenine DNA glycosylase; HAMAP: Methylpurine-DNA glycosylase (MPG); InterPro IPR003180; KEGG: dsy:DSY3705 3-methyladenine DNA glycosylase; PFAM: Methylpurine-DNA glycosylase (MPG); PRIAM: DNA-3-methyladenine glycosylase II; SPTR: 3-methyladenine DNA glycosylase; TIGRFAM: Methylpurine-DNA glycosylase (MPG); IMG reference gene:2503956631; PFAM: Methylpurine-DNA glycosylase (MPG); TIGRFAM: DNA-3-methyladenine glycosylase (3mg); 3-methyladenine DNA glycosylase 412416..413024 Sphaerochaeta coccoides DSM 17374 10494642 YP_004410970.1 CDS Spico_0359 NC_015436.1 413078 415399 R COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: cob:COB47_1803 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator, AraC family; IMG reference gene:2503956632; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator complement(413078..415399) Sphaerochaeta coccoides DSM 17374 10494643 YP_004410971.1 CDS Spico_0360 NC_015436.1 415407 415952 D KEGG: caa:Caka_1364 redoxin domain protein; SPTR: Redoxin domain protein; IMG reference gene:2503956633; PFAM: AhpC/TSA family; hypothetical protein 415407..415952 Sphaerochaeta coccoides DSM 17374 10494644 YP_004410972.1 CDS Spico_0361 NC_015436.1 416193 417668 R COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_02130 arylsulfatase A precursor; PFAM: Sulfatase; SPTR: Arylsulfatase A; IMG reference gene:2503956634; PFAM: Sulfatase; sulfatase complement(416193..417668) Sphaerochaeta coccoides DSM 17374 10494645 YP_004410973.1 CDS Spico_0362 NC_015436.1 417734 419434 R COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: gym:GYMC10_2944 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein family 1; IMG reference gene:2503956635; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein complement(417734..419434) Sphaerochaeta coccoides DSM 17374 10494646 YP_004410974.1 CDS Spico_0363 NC_015436.1 419501 420412 R COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: gym:GYMC10_1004 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503956636; carbohydrate ABC transporter membrane protein 2 complement(419501..420412) Sphaerochaeta coccoides DSM 17374 10494647 YP_004410975.1 CDS Spico_0364 NC_015436.1 420406 421353 R COGs: COG4209 ABC-type polysaccharide transport system permease component; InterPro IPR000515; KEGG: gym:GYMC10_3277 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; manually curated; IMG reference gene:2503956637; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein complement(420406..421353) Sphaerochaeta coccoides DSM 17374 10494648 YP_004410976.1 CDS Spico_0365 NC_015436.1 421572 422972 D COGs: COG3669 Alpha-L-fucosidase; InterPro IPR000933; KEGG: tde:TDE0480 alpha-L-fucosidase; PFAM: Glycoside hydrolase, family 29; SMART: Glycoside hydrolase, family 29; SPTR: Alpha-L-fucosidase; IMG reference gene:2503956638; PFAM: Alpha-L-fucosidase; glycoside hydrolase 29 (alpha-L-fucosidase) 421572..422972 Sphaerochaeta coccoides DSM 17374 10494649 YP_004410977.1 CDS Spico_0366 NC_015436.1 422969 424363 D COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: caa:Caka_0229 sulfatase; PFAM: Sulfatase; SPTR: uncharacterized protein; IMG reference gene:2503956639; PFAM: Sulfatase; sulfatase 422969..424363 Sphaerochaeta coccoides DSM 17374 10494650 YP_004410978.1 CDS Spico_0367 NC_015436.1 424759 426600 D KEGG: bfo:BRAFLDRAFT_80969 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956641; hypothetical protein 424759..426600 Sphaerochaeta coccoides DSM 17374 10494652 YP_004410979.1 CDS Spico_0368 NC_015436.1 426646 427089 D COGs: COG2832 conserved hypothetical protein; InterPro IPR007401; KEGG: hch:HCH_04406 hypothetical protein; PFAM: Protein of unknown function DUF454; SPTR: Uncharacterized protein conserved in bacteria; IMG reference gene:2503956642; PFAM: Protein of unknown function (DUF454); hypothetical protein 426646..427089 Sphaerochaeta coccoides DSM 17374 10494653 YP_004410980.1 CDS Spico_0369 NC_015436.1 427136 428479 R InterPro IPR011701; KEGG: dhd:Dhaf_2526 H+ antiporter protein; PFAM: Major facilitator superfamily MFS-1; SPTR: uncharacterized protein; IMG reference gene:2503956643; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein complement(427136..428479) Sphaerochaeta coccoides DSM 17374 10494654 YP_004410981.1 CDS Spico_0370 NC_015436.1 428701 428970 D InterPro IPR006121; KEGG: mmh:Mmah_1006 heavy metal translocating P-type ATPase; PFAM: Heavy metal transport/detoxification protein; SPTR: Heavy metal transport/detoxification protein; IMG reference gene:2503956644; PFAM: Heavy-metal-associated domain; heavy metal transport/detoxification protein 428701..428970 Sphaerochaeta coccoides DSM 17374 10494655 YP_004410982.1 CDS Spico_0371 NC_015436.1 429023 431338 D COGs: COG2217 Cation transport ATPase; InterProIPR006121:IPR008250:IPR005834:IPR006403:IPR 006416:IPR001757; KEGG: brm:Bmur_1532 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; PRIAM: Copper-exporting ATPase; SPTR: Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; IMG reference gene:2503956645; PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase 429023..431338 Sphaerochaeta coccoides DSM 17374 10494656 YP_004410983.1 CDS Spico_0372 NC_015436.1 431340 432644 R COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR013027; KEGG: amt:Amet_0679 oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: Glutamate synthase (NADPH); SPTR: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; IMG reference gene:2503956646; PFAM: Pyridine nucleotide-disulphide oxidoreductase; glutamate synthase (NADPH) complement(431340..432644) Sphaerochaeta coccoides DSM 17374 10494657 YP_004410984.1 CDS Spico_0373 NC_015436.1 432906 433472 D COGs: COG0622 phosphoesterase; InterPro IPR004843:IPR000979; KEGG: csh:Closa_0691 phosphodiesterase, MJ0936 family; PFAM: Metallo-dependent phosphatase; SPTR: uncharacterized protein; TIGRFAM: Phosphodiesterase MJ0936; IMG reference gene:2503956647; PFAM: Calcineurin-like phosphoesterase; TIGRFAM: phosphoesterase, MJ0936 family; phosphodiesterase 432906..433472 Sphaerochaeta coccoides DSM 17374 10494658 YP_004410985.1 CDS Spico_0374 NC_015436.1 433720 435078 D KEGG: sta:STHERM_c01800 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956648; hypothetical protein 433720..435078 Sphaerochaeta coccoides DSM 17374 10494659 YP_004410986.1 CDS Spico_0375 NC_015436.1 435282 436643 D COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR006097:IPR006096; KEGG: aba:Acid345_0942 glutamate dehydrogenase; PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain; PRIAM: Glutamate dehydrogenase (NADP(+)); SMART: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; SPTR: Glutamate dehydrogenase (NADP); IMG reference gene:2503956649; PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; glutamate dehydrogenase 435282..436643 Sphaerochaeta coccoides DSM 17374 10494660 YP_004410987.1 CDS Spico_0376 NC_015436.1 436852 438168 D COGs: COG2270 Permease of the major facilitator superfamily; InterPro IPR011701; KEGG: sfu:Sfum_3450 major facilitator transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; IMG reference gene:2503956650; PFAM: Vacuole effluxer Atg22 like; major facilitator superfamily protein 436852..438168 Sphaerochaeta coccoides DSM 17374 10494661 YP_004410988.1 CDS Spico_0377 NC_015436.1 438680 440152 D KEGG: cti:RALTA_B1578 NAD+-dependent betaine aldehyde dehydrogenase; SPTR: NAD+-dependent betaine aldehyde dehydrogenase; IMG reference gene:2503956652; hypothetical protein 438680..440152 Sphaerochaeta coccoides DSM 17374 10494663 YP_004410989.1 CDS Spico_0378 NC_015436.1 440033 441028 R COGs: COG0812 UDP-N-acetylmuramate dehydrogenase; HAMAP: UDP-N-acetylenolpyruvoylglucosamine reductase; InterPro IPR003170:IPR006094:IPR011601; KEGG: dap:Dacet_0478 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal; FAD linked oxidase, N-terminal; PRIAM: UDP-N-acetylmuramate dehydrogenase; SPTR: UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; IMG reference gene:2503956653; PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; UDP-N-acetylenolpyruvoylglucosamine reductase complement(440033..441028) Sphaerochaeta coccoides DSM 17374 10494664 YP_004410990.1 CDS Spico_0379 NC_015436.1 441050 442486 D COGs: COG0215 Cysteinyl-tRNA synthetase; InterPro IPR015803; KEGG: sta:STHERM_c18260 hypothetical protein; PFAM: Cysteinyl-tRNA synthetase, class Ia; PRIAM: Cysteine--tRNA ligase; SPTR: uncharacterized protein; TIGRFAM: Cysteinyl-tRNA synthetase, class Ia; IMG reference gene:2503956654; PFAM: tRNA synthetases class I (C) catalytic domain; TIGRFAM: cysteinyl-tRNA synthetase; cysteinyl-tRNA synthetase 441050..442486 Sphaerochaeta coccoides DSM 17374 10494665 YP_004410991.1 CDS Spico_0380 NC_015436.1 442515 443042 D COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: ssm:Spirs_2153 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase sigma-24 factor, ; TIGRFAM: RNA polymerase sigma-70; IMG reference gene:2503956655; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; ECF subfamily RNA polymerase sigma-24 subunit 442515..443042 Sphaerochaeta coccoides DSM 17374 10494666 YP_004410992.1 CDS Spico_0381 NC_015436.1 443032 443646 D KEGG: ssm:Spirs_2152 transmembrane anti-sigma factor; SPTR: uncharacterized protein; IMG reference gene:2503956656; hypothetical protein 443032..443646 Sphaerochaeta coccoides DSM 17374 10494667 YP_004410993.1 CDS Spico_0382 NC_015436.1 443845 444750 R COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: pjd:Pjdr2_0473 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503956657; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 2 complement(443845..444750) Sphaerochaeta coccoides DSM 17374 10494668 YP_004410994.1 CDS Spico_0383 NC_015436.1 444762 445712 R COGs: COG4209 ABC-type polysaccharide transport system permease component; InterPro IPR000515; KEGG: pjd:Pjdr2_0472 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503956658; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein complement(444762..445712) Sphaerochaeta coccoides DSM 17374 10494669 YP_004410995.1 CDS Spico_0384 NC_015436.1 445975 448254 D InterPro IPR001286; KEGG: amd:AMED_3993 hypothetical protein; PFAM: Glycoside hydrolase, family 59; PRIAM: Galactosylceramidase; SPTR: uncharacterized protein; IMG reference gene:2503956659; PFAM: Glycosyl hydrolase 59; galactosylceramidase 445975..448254 Sphaerochaeta coccoides DSM 17374 10494670 YP_004410996.1 CDS Spico_0385 NC_015436.1 448291 449820 D COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: pjd:Pjdr2_0474 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein family 1; IMG reference gene:2503956660; PFAM: Domain of unknown function (DUF3502); Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein 448291..449820 Sphaerochaeta coccoides DSM 17374 10494671 YP_004410997.1 CDS Spico_0386 NC_015436.1 449890 452097 D COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR000005:IPR018060; KEGG: ppy:PPE_03254 AraC-type DNA-binding domain-containing protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: AraC-type DNA-binding domain-containing protein; IMG reference gene:2503956661; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator 449890..452097 Sphaerochaeta coccoides DSM 17374 10494672 YP_004410998.1 CDS Spico_0387 NC_015436.1 452284 454938 D COGs: COG0525 Valyl-tRNA synthetase; HAMAP: Valyl-tRNA synthetase; InterPro IPR002303:IPR002300:IPR013155:IPR019499; KEGG: ssm:Spirs_2147 valyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ia; Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding; Valyl-tRNA synthetase, class Ia, tRNA-binding arm; PRIAM: Valine--tRNA ligase; SPTR: Valyl-tRNA synthetase; TIGRFAM: Valyl-tRNA synthetase; IMG reference gene:2503956662; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase; valyl-tRNA synthetase 452284..454938 Sphaerochaeta coccoides DSM 17374 10494673 YP_004410999.1 CDS Spico_0388 NC_015436.1 455035 455214 R KEGG: pnu:Pnuc_1747 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956663; hypothetical protein complement(455035..455214) Sphaerochaeta coccoides DSM 17374 10494674 YP_004411000.1 CDS Spico_0389 NC_015436.1 455343 456689 R COGs: COG0826 Collagenase and related protease; InterPro IPR001539; KEGG: sta:STHERM_c16410 hypothetical protein; PFAM: Peptidase U32; SPTR: uncharacterized protein; IMG reference gene:2503956664; PFAM: Peptidase U32; peptidase U32 complement(455343..456689) Sphaerochaeta coccoides DSM 17374 10494675 YP_004411001.1 CDS Spico_0390 NC_015436.1 456686 459337 R COGs: COG0466 ATP-dependent Lon protease; InterProIPR003111:IPR003959:IPR008269:IPR004815:IPR 003593; KEGG: ssm:Spirs_2144 ATP-dependent protease La; PFAM: Peptidase S16, Lon C-terminal; ATPase, AAA-type, core; Peptidase S16, lon N-terminal; PRIAM: Endopeptidase La; SMART: Peptidase S16, lon N-terminal; ATPase, AAA+ type, core; SPTR: ATP-dependent protease La; TIGRFAM: Peptidase S16, ATP-dependent protease La; IMG reference gene:2503956665; PFAM: ATP-dependent protease La (LON) domain; ATPase associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La; ATP dependent PIM1 peptidase complement(456686..459337) Sphaerochaeta coccoides DSM 17374 10494676 YP_004411002.1 CDS Spico_0391 NC_015436.1 459532 460233 R COGs: COG1738 conserved hypothetical protein; InterPro IPR003744; KEGG: mma:MM_1800 transporter; PFAM: Protein of unknown function DUF165; SPTR: Transporter; TIGRFAM: Protein of unknown function DUF165; IMG reference gene:2503956666; PFAM: Uncharacterized ACR, YhhQ family COG1738; TIGRFAM: conserved hypothetical integral membrane protein; hypothetical protein complement(459532..460233) Sphaerochaeta coccoides DSM 17374 10494677 YP_004411003.1 CDS Spico_0392 NC_015436.1 460408 461784 R InterPro IPR010828; KEGG: amt:Amet_1520 hypothetical protein; PFAM: Alcohol acetyltransferase; SPTR: uncharacterized protein; IMG reference gene:2503956667; PFAM: Alcohol acetyltransferase; alcohol acetyltransferase complement(460408..461784) Sphaerochaeta coccoides DSM 17374 10494678 YP_004411004.1 CDS Spico_0393 NC_015436.1 461906 463459 R COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: amt:Amet_1519 integral membrane sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Integral membrane sensor signal transduction histidine kinase; IMG reference gene:2503956668; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase complement(461906..463459) Sphaerochaeta coccoides DSM 17374 10494679 YP_004411005.1 CDS Spico_0394 NC_015436.1 463456 464130 R COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: amt:Amet_1518 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SPTR: Two component transcriptional regulator, winged helix family; IMG reference gene:2503956669; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator complement(463456..464130) Sphaerochaeta coccoides DSM 17374 10494680 YP_004411006.1 CDS Spico_0395 NC_015436.1 464273 465760 R KEGG: mxa:MXAN_4735 hypothetical protein; SPTR: membrane protein; manually curated; IMG reference gene:2503956670; hypothetical protein complement(464273..465760) Sphaerochaeta coccoides DSM 17374 10494681 YP_004411007.1 CDS Spico_0396 NC_015436.1 465872 466675 D COGs: COG1381 Recombinational DNA repair protein (RecF pathway); InterPro IPR003717; KEGG: ssm:Spirs_2143 DNA repair protein RecO; PFAM: Recombination protein O, RecO; SPTR: uncharacterized protein; TIGRFAM: Recombination protein O, RecO; IMG reference gene:2503956671; PFAM: Recombination protein O C terminal; Recombination protein O N terminal; TIGRFAM: DNA repair protein RecO; DNA repair protein RecO 465872..466675 Sphaerochaeta coccoides DSM 17374 10494682 YP_004411008.1 CDS Spico_0397 NC_015436.1 466702 468828 D COGs: COG0608 Single-stranded DNA-specific exonuclease; InterPro IPR001667:IPR003156:IPR004610; KEGG: ssm:Spirs_2141 single-stranded-DNA-specific exonuclease RecJ; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; SPTR: Single-stranded-DNA-specific exonuclease; TIGRFAM: Bacterial RecJ exonuclease; IMG reference gene:2503956672; PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; single-stranded-DNA-specific exonuclease RecJ 466702..468828 Sphaerochaeta coccoides DSM 17374 10494683 YP_004411009.1 CDS Spico_0398 NC_015436.1 468888 469106 D HAMAP: Ribosomal protein S21; InterPro IPR001911; KEGG: ssm:Spirs_2139 ribosomal protein S21; PFAM: Ribosomal protein S21; SPTR: 30S ribosomal protein S21; TIGRFAM: Ribosomal protein S21; IMG reference gene:2503956673; PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21; 30S ribosomal protein S21 468888..469106 Sphaerochaeta coccoides DSM 17374 10494684 YP_004411010.1 CDS Spico_0399 NC_015436.1 469358 469822 R InterPro IPR015067; KEGG: amt:Amet_1218 hypothetical protein; PFAM: Protein of unknown function DUF1893; SPTR: uncharacterized protein; IMG reference gene:2503956674; PFAM: Domain of unknown function (DUF1893); hypothetical protein complement(469358..469822) Sphaerochaeta coccoides DSM 17374 10494685 YP_004411011.1 CDS Spico_0400 NC_015436.1 469819 470607 R COGs: COG1641 conserved hypothetical protein; InterPro IPR002822; KEGG: mpi:Mpet_1113 hypothetical protein; PFAM: Uncharacterised protein family UPF0272; SPTR: UPF0272 protein CUS_2000; IMG reference gene:2503956675; PFAM: Protein of unknown function DUF111; hypothetical protein complement(469819..470607) Sphaerochaeta coccoides DSM 17374 10494686 YP_004411012.1 CDS Spico_0401 NC_015436.1 470841 471725 D COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140; KEGG: ssm:Spirs_2138 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; PRIAM: Phosphoglycerate dehydrogenase; SPTR: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; IMG reference gene:2503956676; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; Phosphoglycerate dehydrogenase 470841..471725 Sphaerochaeta coccoides DSM 17374 10494687 YP_004411013.1 CDS Spico_0402 NC_015436.1 471709 472812 D COGs: COG1932 Phosphoserine aminotransferase; HAMAP: Phosphoserine aminotransferase; InterPro IPR022278:IPR000192; KEGG: ssm:Spirs_2137 phosphoserine aminotransferase; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Phosphoserine transaminase; SPTR: Phosphoserine aminotransferase; IMG reference gene:2503956677; PFAM: Aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase; phosphoserine aminotransferase apoenzyme 471709..472812 Sphaerochaeta coccoides DSM 17374 10494688 YP_004411014.1 CDS Spico_0403 NC_015436.1 472824 473285 D COGs: COG1522 Transcriptional regulators; InterPro IPR019888; KEGG: ssm:Spirs_2136 transcriptional regulator, AsnC family; SMART: Transcription regulator AsnC-type; SPTR: HTH-type transcriptional regulator; IMG reference gene:2503956678; AsnC family transcriptional regulator 472824..473285 Sphaerochaeta coccoides DSM 17374 10494689 YP_004411015.1 CDS Spico_0404 NC_015436.1 473461 474633 D KEGG: ssm:Spirs_2368 acyltransferase; SPTR: Phospholipid/glycerol acyltransferase; IMG reference gene:2503956679; PFAM: Acyltransferase; acyltransferase 473461..474633 Sphaerochaeta coccoides DSM 17374 10494690 YP_004411016.1 CDS Spico_0405 NC_015436.1 474710 476590 R COGs: COG0323 DNA mismatch repair enzyme (predicted ATPase); HAMAP: DNA mismatch repair protein, MutL; InterProIPR020667:IPR003594:IPR013507:IPR014790:IPR 014763; KEGG: ssm:Spirs_2361 DNA mismatch repair protein MutL; PFAM: MutL, C-terminal, dimerisation; DNA mismatch repair protein, C-terminal; ATPase-like, ATP-binding domain; SMART: MutL, C-terminal, dimerisation; SPTR: DNA mismatch repair protein MutL; TIGRFAM: DNA mismatch repair protein, N-terminal; IMG reference gene:2503956680; PFAM: MutL C terminal dimerisation domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL; DNA mismatch repair protein mutL complement(474710..476590) Sphaerochaeta coccoides DSM 17374 10494691 YP_004411017.1 CDS Spico_0406 NC_015436.1 476890 479652 R KEGG: nve:NEMVE_v1g200105 hypothetical protein; SPTR: Predicted protein; IMG reference gene:2503956681; hypothetical protein complement(476890..479652) Sphaerochaeta coccoides DSM 17374 10494692 YP_004411018.1 CDS Spico_0407 NC_015436.1 479710 481053 R KEGG: ssm:Spirs_2359 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956682; hypothetical protein complement(479710..481053) Sphaerochaeta coccoides DSM 17374 10494693 YP_004411019.1 CDS Spico_0408 NC_015436.1 481186 482484 R COGs: COG1078 HD superfamily phosphohydrolase; InterPro IPR003607; KEGG: ssm:Spirs_2352 metal dependent phosphohydrolase; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: uncharacterized protein; IMG reference gene:2503956683; PFAM: HD domain; metal dependent phosphohydrolase complement(481186..482484) Sphaerochaeta coccoides DSM 17374 10494694 YP_004411020.1 CDS Spico_0409 NC_015436.1 482820 483494 D KEGG: pyo:PY02442 hypothetical protein; SPTR: Zinc finger, C2H2 type, ; IMG reference gene:2503956685; hypothetical protein 482820..483494 Sphaerochaeta coccoides DSM 17374 10494696 YP_004411021.1 CDS Spico_0410 NC_015436.1 483442 484329 D COGs: COG2896 Molybdenum cofactor biosynthesis protein; InterPro IPR007197:IPR006638; KEGG: ate:Athe_0829 molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Molybdenum cofactor biosynthesis protein A; IMG reference gene:2503956686; PFAM: Radical SAM superfamily; radical SAM protein 483442..484329 Sphaerochaeta coccoides DSM 17374 10494697 YP_004411022.1 CDS Spico_0411 NC_015436.1 484313 485320 D COGs: COG2896 Molybdenum cofactor biosynthesis protein; InterPro IPR007197:IPR006638; KEGG: pab:PAB2273 molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Radical SAM domain protein; manually curated; IMG reference gene:2503956687; PFAM: Radical SAM superfamily; radical SAM protein 484313..485320 Sphaerochaeta coccoides DSM 17374 10494698 YP_004411023.1 CDS Spico_0412 NC_015436.1 485333 486103 D KEGG: dda:Dd703_0966 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956688; hypothetical protein 485333..486103 Sphaerochaeta coccoides DSM 17374 10494699 YP_004411024.1 CDS Spico_0413 NC_015436.1 486073 486657 D KEGG: dvi:Dvir_GJ17340 GJ17340 gene product from transcript GJ17340-RA; SPTR: GJ17340; IMG reference gene:2503956689; hypothetical protein 486073..486657 Sphaerochaeta coccoides DSM 17374 10494700 YP_004411025.1 CDS Spico_0414 NC_015436.1 486654 487616 D InterPro IPR013217; KEGG: npu:Npun_R0686 methyltransferase type 12; PFAM: Methyltransferase type 12; SPTR: Methyltransferase domain family; IMG reference gene:2503956690; type 12 methyltransferase 486654..487616 Sphaerochaeta coccoides DSM 17374 10494701 YP_004411026.1 CDS Spico_0415 NC_015436.1 487629 488843 D InterPro IPR011701; KEGG: cbk:CLL_A2467 permease of the major facilitator superfamily; PFAM: Major facilitator superfamily MFS-1; SPTR: Possible MDR-type permease; IMG reference gene:2503956691; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein 487629..488843 Sphaerochaeta coccoides DSM 17374 10494702 YP_004411027.1 CDS Spico_0416 NC_015436.1 488862 489629 D KEGG: pyo:PY05620 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956692; hypothetical protein 488862..489629 Sphaerochaeta coccoides DSM 17374 10494703 YP_004411028.1 CDS Spico_0417 NC_015436.1 489639 489905 D KEGG: amr:AM1_1921 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956693; hypothetical protein 489639..489905 Sphaerochaeta coccoides DSM 17374 10494704 YP_004411029.1 CDS Spico_0418 NC_015436.1 489906 490640 D InterPro IPR003675; KEGG: llk:LLKF_0092 CAAX amino terminal protease; PFAM: Abortive infection protein; SPTR: CAAX amino terminal protease; IMG reference gene:2503956694; PFAM: CAAX amino terminal protease; abortive infection protein 489906..490640 Sphaerochaeta coccoides DSM 17374 10494705 YP_004411030.1 CDS Spico_0419 NC_015436.1 490810 491742 D COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197; KEGG: vdi:Vdis_1894 radical SAM domain-containing protein; PFAM: Radical SAM; SPTR: heme biosynthesis protein; IMG reference gene:2503956695; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain; radical SAM protein 490810..491742 Sphaerochaeta coccoides DSM 17374 10494706 YP_004411031.1 CDS Spico_0420 NC_015436.1 491744 494383 D COGs: COG0525 Valyl-tRNA synthetase; HAMAP: Valyl-tRNA synthetase; InterPro IPR002303:IPR002300:IPR013155:IPR019499; KEGG: ssm:Spirs_2147 valyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ia; Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding; Valyl-tRNA synthetase, class Ia, tRNA-binding arm; PRIAM: Valine--tRNA ligase; SPTR: Valyl-tRNA synthetase; TIGRFAM: Valyl-tRNA synthetase; IMG reference gene:2503956696; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase; valyl-tRNA synthetase 491744..494383 Sphaerochaeta coccoides DSM 17374 10494707 YP_004411032.1 CDS Spico_0421 NC_015436.1 494597 496480 R COGs: COG5002 Signal transduction histidine kinase; InterPro IPR003660:IPR013767:IPR003661:IPR003594; KEGG: dol:Dole_1931 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; PAS fold; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; SPTR: Multi-sensor signal transduction histidine kinase; IMG reference gene:2503956697; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: PAS domain S-box; multi-sensor signal transduction histidine kinase complement(494597..496480) Sphaerochaeta coccoides DSM 17374 10494708 YP_004411033.1 CDS Spico_0422 NC_015436.1 496477 497232 R COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: sta:STHERM_c05370 transcriptional regulatory protein; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SPTR: Transcriptional regulatory protein; IMG reference gene:2503956698; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator complement(496477..497232) Sphaerochaeta coccoides DSM 17374 10494709 YP_004411034.1 CDS Spico_0424 NC_015436.1 498161 498910 D COGs: COG0588 Phosphoglycerate mutase 1; HAMAP: Phosphoglycerate mutase 1; InterPro IPR005952:IPR013078; KEGG: sus:Acid_4374 phosphoglycerate mutase; PFAM: Histidine phosphatase superfamily, clade-1; PRIAM: Bisphosphoglycerate mutase; SMART: Histidine phosphatase superfamily, clade-1; SPTR: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; TIGRFAM: Phosphoglycerate mutase 1; IMG reference gene:2503956700; PFAM: Phosphoglycerate mutase; TIGRFAM: phosphoglycerate mutase, BPG-dependent, family 1; phosphoglycerate mutase 498161..498910 Sphaerochaeta coccoides DSM 17374 10494711 YP_004411035.1 CDS Spico_0425 NC_015436.1 498940 499809 D COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595:IPR001808; KEGG: cth:Cthe_2775 Crp/FNR family transcriptional regulator; PFAM: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; SMART: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; SPTR: Transcriptional regulator, Crp/Fnr family; IMG reference gene:2503956701; PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain; Crp/Fnr family transcriptional regulator 498940..499809 Sphaerochaeta coccoides DSM 17374 10494712 YP_004411036.1 CDS Spico_0426 NC_015436.1 500105 502192 D COGs: COG3808 Inorganic pyrophosphatase; InterPro IPR004131; KEGG: cth:Cthe_1425 membrane-bound proton-translocating pyrophosphatase; PFAM: Pyrophosphate-energised proton pump; PRIAM: Inorganic diphosphatase; SPTR: Inorganic diphosphatase; IMG reference gene:2503956702; PFAM: Inorganic H+ pyrophosphatase; TIGRFAM: vacuolar-type H(+)-translocating pyrophosphatase; inorganic diphosphatase 500105..502192 Sphaerochaeta coccoides DSM 17374 10494713 YP_004411037.1 CDS Spico_0427 NC_015436.1 502288 502800 R KEGG: pmg:P9301_08931 urease subunit alpha; SPTR: uncharacterized protein; IMG reference gene:2503956703; hypothetical protein complement(502288..502800) Sphaerochaeta coccoides DSM 17374 10494714 YP_004411038.1 CDS Spico_0428 NC_015436.1 503057 503287 D HAMAP: Ribosomal protein L28; InterPro IPR001383; KEGG: ssm:Spirs_2771 ribosomal protein L28; PFAM: Ribosomal protein L28; SPTR: 50S ribosomal protein L28; TIGRFAM: Ribosomal protein L28; IMG reference gene:2503956704; PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; 50S ribosomal protein L28 503057..503287 Sphaerochaeta coccoides DSM 17374 10494715 YP_004411039.1 CDS Spico_0429 NC_015436.1 503437 505872 D COGs: COG0460 Homoserine dehydrogenase; InterPro IPR001048:IPR002912:IPR005106:IPR001342; KEGG: ssm:Spirs_2770 aspartate kinase; PFAM: Homoserine dehydrogenase, catalytic; Aspartate/homoserine dehydrogenase, NAD-binding; Aspartate/glutamate/uridylate kinase; Amino acid-binding ACT; PRIAM: Aspartate kinase., Homoserine dehydrogenase; SPTR: Bifunctional aspartokinase/homoserine dehydrogenase II; IMG reference gene:2503956705; PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain; ACT domain; Amino acid kinase; TIGRFAM: aspartate kinase; aspartate kinase 503437..505872 Sphaerochaeta coccoides DSM 17374 10494716 YP_004411040.1 CDS Spico_0430 NC_015436.1 505920 507185 D COGs: COG0498 Threonine synthase; InterPro IPR001926:IPR004450; KEGG: fph:Fphi_0311 threonine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; PRIAM: Threonine synthase; SPTR: Threonine synthase; TIGRFAM: Threonine synthase; IMG reference gene:2503956706; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase; threonine synthase 505920..507185 Sphaerochaeta coccoides DSM 17374 10494717 YP_004411041.1 CDS Spico_0431 NC_015436.1 507212 508486 R COGs: COG0153 Galactokinase; InterPro IPR019539:IPR006204; KEGG: ssm:Spirs_2254 galactokinase; PFAM: Galactokinase galactose-binding domain; GHMP kinase; PRIAM: Galactokinase; SPTR: uncharacterized protein; IMG reference gene:2503956707; PFAM: Galactokinase galactose-binding signature; GHMP kinases N terminal domain; galactokinase complement(507212..508486) Sphaerochaeta coccoides DSM 17374 10494718 YP_004411042.1 CDS Spico_0432 NC_015436.1 508680 510116 R COGs: COG0514 Superfamily II DNA helicase; InterPro IPR011545:IPR001650:IPR004589:IPR014001; KEGG: ssm:Spirs_2762 ATP-dependent DNA helicase, RecQ family; PFAM: Helicase, C-terminal; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: ATP-dependent DNA helicase, RecQ family; TIGRFAM: DNA helicase, ATP-dependent, RecQ type; manually curated; IMG reference gene:2503956708; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ complement(508680..510116) Sphaerochaeta coccoides DSM 17374 10494719 YP_004411043.1 CDS Spico_0433 NC_015436.1 510311 511228 D COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: mxa:MXAN_3330 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: uncharacterized protein; IMG reference gene:2503956709; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; phospholipid/glycerol acyltransferase 510311..511228 Sphaerochaeta coccoides DSM 17374 10494720 YP_004411044.1 CDS Spico_0434 NC_015436.1 511329 514259 R InterPro IPR013378; KEGG: geo:Geob_1283 outer membrane adhesin like proteiin; PFAM: Listeria/Bacterioides repeat; SPTR: Outer membrane adhesin like proteiin; TIGRFAM: Listeria/Bacterioides repeat; IMG reference gene:2503956710; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); TIGRFAM: Listeria/Bacterioides repeat; cell wall/surface repeat protein complement(511329..514259) Sphaerochaeta coccoides DSM 17374 10494721 YP_004411045.1 CDS Spico_0435 NC_015436.1 514769 515623 D COGs: COG0226 ABC-type phosphate transport system periplasmic component; InterPro IPR011862; KEGG: ssm:Spirs_1702 phosphate binding protein; SPTR: Phosphate binding protein; TIGRFAM: Phosphate binding protein; IMG reference gene:2503956711; TIGRFAM: phosphate binding protein; phosphate binding protein 514769..515623 Sphaerochaeta coccoides DSM 17374 10494722 YP_004411046.1 CDS Spico_0436 NC_015436.1 515677 516570 D COGs: COG0573 ABC-type phosphate transport system permease component; InterPro IPR000515:IPR011864; KEGG: ssm:Spirs_1701 phosphate ABC transporter, inner membrane subunit PstC; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Phosphate ABC transporter, inner membrane subunit PstC; TIGRFAM: Phosphate ABC transporter, permease PstC; IMG reference gene:2503956712; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease PstC; phosphate ABC transporter, permease PstA; phosphate ABC transporter substrate-binding protein 515677..516570 Sphaerochaeta coccoides DSM 17374 10494723 YP_004411047.1 CDS Spico_0437 NC_015436.1 516573 518150 D COGs: COG0581 ABC-type phosphate transport system permease component; InterPro IPR000515:IPR005672; KEGG: ssm:Spirs_1700 phosphate ABC transporter, inner membrane subunit PstA; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Phosphate ABC transporter, inner membrane subunit PstA; TIGRFAM: Phosphate transport system permease 2; IMG reference gene:2503956713; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease PstA; phosphate ABC transporter permease 516573..518150 Sphaerochaeta coccoides DSM 17374 10494724 YP_004411048.1 CDS Spico_0438 NC_015436.1 518147 518944 D COGs: COG1117 ABC-type phosphate transport system ATPase component; InterPro IPR003439:IPR005670:IPR003593; KEGG: cbf:CLI_2585 phosphate transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Phosphate ABC transporter, ATP-binding protein; TIGRFAM: Phosphate transport system permease 1; IMG reference gene:2503956714; PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein; phosphate ABC transporter ATP-binding protein 518147..518944 Sphaerochaeta coccoides DSM 17374 10494725 YP_004411049.1 CDS Spico_0439 NC_015436.1 519051 519713 D COGs: COG0704 Phosphate uptake regulator; InterPro IPR008170; KEGG: sta:STHERM_c05380 transcriptional regulatory protein; PFAM: PhoU; SPTR: Transcriptional regulatory protein; IMG reference gene:2503956715; PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU; phosphate uptake regulator PhoU 519051..519713 Sphaerochaeta coccoides DSM 17374 10494726 YP_004411050.1 CDS Spico_0440 NC_015436.1 519970 520755 D InterPro IPR013216; KEGG: cbt:CLH_2444 methyltransferase; PFAM: Methyltransferase type 11; SPTR: Methyltransferase; IMG reference gene:2503956716; PFAM: Methyltransferase domain; type 11 methyltransferase 519970..520755 Sphaerochaeta coccoides DSM 17374 10494727 YP_004411051.1 CDS Spico_0441 NC_015436.1 520884 522095 D COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR004839; KEGG: ssm:Spirs_2756 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase, class I/classII; PRIAM: Glycine C-acetyltransferase; SPTR: 8-amino-7-oxononanoate synthase; IMG reference gene:2503956717; PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; serine palmitoyltransferase 520884..522095 Sphaerochaeta coccoides DSM 17374 10494728 YP_004411052.1 CDS Spico_0442 NC_015436.1 522227 524533 R COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; IMG reference gene:2503956718; PFAM: Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 complement(522227..524533) Sphaerochaeta coccoides DSM 17374 10494729 YP_004411053.1 CDS Spico_0443 NC_015436.1 524727 526286 R COGs: COG1640 4-alpha-glucanotransferase; InterPro IPR003385; KEGG: ssm:Spirs_4115 4-alpha-glucanotransferase; PFAM: Glycoside hydrolase, family 77; PRIAM: 4-alpha-glucanotransferase; SPTR: 4-alpha-glucanotransferase; TIGRFAM: Glycoside hydrolase, family 77; IMG reference gene:2503956719; PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; 4-alpha-glucanotransferase complement(524727..526286) Sphaerochaeta coccoides DSM 17374 10494730 YP_004411054.1 CDS Spico_0444 NC_015436.1 526306 527358 R COGs: COG1609 Transcriptional regulators; InterPro IPR001761:IPR000843; KEGG: ssm:Spirs_0925 transcriptional regulator, LacI family; PFAM: Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI; SPTR: Alanine racemase; IMG reference gene:2503956720; PFAM: Bacterial regulatory proteins, lacI family; family; LacI family transcriptional regulator complement(526306..527358) Sphaerochaeta coccoides DSM 17374 10494731 YP_004411055.1 CDS Spico_0445 NC_015436.1 527355 528188 R COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: ccb:Clocel_0515 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503956721; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 2 complement(527355..528188) Sphaerochaeta coccoides DSM 17374 10494732 YP_004411056.1 CDS Spico_0446 NC_015436.1 528185 529027 R COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: ccb:Clocel_0514 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503956722; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 1 complement(528185..529027) Sphaerochaeta coccoides DSM 17374 10494733 YP_004411057.1 CDS Spico_0447 NC_015436.1 529123 530466 R COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: ccb:Clocel_0513 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein family 1; IMG reference gene:2503956723; PFAM: Bacterial extracellular solute-binding protein; carbohydrate ABC transporter substrate-binding protein complement(529123..530466) Sphaerochaeta coccoides DSM 17374 10494734 YP_004411058.1 CDS Spico_0448 NC_015436.1 530805 532313 D COGs: COG0516 IMP dehydrogenase/GMP reductase; InterPro IPR001093:IPR000644; KEGG: afn:Acfer_1275 IMP dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; Cystathionine beta-synthase, core; PRIAM: IMP dehydrogenase; SPTR: uncharacterized protein; IMG reference gene:2503956724; PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase; IMP dehydrogenase 530805..532313 Sphaerochaeta coccoides DSM 17374 10494735 YP_004411059.1 CDS Spico_0449 NC_015436.1 532778 533485 D COGs: COG0325 enzyme with a TIM-barrel fold; InterPro IPR001608:IPR011078; KEGG: ssm:Spirs_2472 alanine racemase domain protein; PFAM: Alanine racemase, N-terminal; SPTR: uncharacterized protein; TIGRFAM: pyridoxal phosphate-dependent enzyme, YBL036C type; IMG reference gene:2503956726; PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family; hypothetical protein 532778..533485 Sphaerochaeta coccoides DSM 17374 10494737 YP_004411060.1 CDS Spico_0450 NC_015436.1 533482 533826 D KEGG: ssm:Spirs_2471 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956727; hypothetical protein 533482..533826 Sphaerochaeta coccoides DSM 17374 10494738 YP_004411061.1 CDS Spico_0451 NC_015436.1 533829 534818 D COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145:IPR006225; KEGG: tpd:Teth39_1349 RluA family pseudouridine synthase; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RluC/RluD; IMG reference gene:2503956728; PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; pseudouridine synthase 533829..534818 Sphaerochaeta coccoides DSM 17374 10494739 YP_004411062.1 CDS Spico_0452 NC_015436.1 534801 535385 R COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001279; KEGG: ssm:Spirs_2469 hypothetical protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; SPTR: Predicted beta lactamase like protein; IMG reference gene:2503956729; PFAM: Metallo-beta-lactamase superfamily; beta-lactamase domain-containing protein complement(534801..535385) Sphaerochaeta coccoides DSM 17374 10494740 YP_004411063.1 CDS Spico_0453 NC_015436.1 535382 535960 R InterPro IPR001646; KEGG: ssm:Spirs_2468 pentapeptide repeat protein; PFAM: Pentapeptide repeat; SPTR: Predicted pentapeptide protein; IMG reference gene:2503956730; pentapeptide repeat-containing protein complement(535382..535960) Sphaerochaeta coccoides DSM 17374 10494741 YP_004411064.1 CDS Spico_0454 NC_015436.1 536050 537054 D COGs: COG1162 GTPase; HAMAP: Ribosome biogenesis GTPase RsgA, InterPro IPR004881; KEGG: sta:STHERM_c17030 GTPase YjeQ; PFAM: Ribosome biogenesis GTPase RsgA, SPTR: GTPase YjeQ; TIGRFAM: Ribosome biogenesis GTPase RsgA, IMG reference gene:2503956731; PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A; ribosome biogenesis GTPase RsgA 536050..537054 Sphaerochaeta coccoides DSM 17374 10494742 YP_004411065.1 CDS Spico_0455 NC_015436.1 537035 539386 D COGs: COG1193 Mismatch repair ATPase (MutS family); InterPro IPR000432:IPR002625:IPR007696; KEGG: ssm:Spirs_2465 MutS2 family protein; PFAM: DNA mismatch repair protein MutS, C-terminal; Smr protein/MutS2 C-terminal; SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; Smr protein/MutS2 C-terminal; SPTR: MutS2 protein; IMG reference gene:2503956732; PFAM: MutS domain V; Smr domain; TIGRFAM: MutS2 family protein; DNA mismatch repair protein MutS domain-containing protein 537035..539386 Sphaerochaeta coccoides DSM 17374 10494743 YP_004411066.1 CDS Spico_0456 NC_015436.1 539621 540301 D COGs: COG3819 membrane protein; InterPro IPR010374; KEGG: cpe:CPE1427 hypothetical protein; PFAM: Protein of unknown function DUF969; SPTR: uncharacterized protein; IMG reference gene:2503956733; PFAM: Protein of unknown function (DUF969); hypothetical protein 539621..540301 Sphaerochaeta coccoides DSM 17374 10494744 YP_004411067.1 CDS Spico_0457 NC_015436.1 540305 541219 D COGs: COG3817 membrane protein; InterPro IPR009323; KEGG: cbt:CLH_1447 permease; PFAM: Protein of unknown function DUF979; SPTR: Permease; IMG reference gene:2503956734; PFAM: Protein of unknown function (DUF979); hypothetical protein 540305..541219 Sphaerochaeta coccoides DSM 17374 10494745 YP_004411068.1 CDS Spico_0458 NC_015436.1 541255 541896 D COGs: COG2039 Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase); HAMAP: Peptidase C15, pyroglutamyl peptidase I; InterPro IPR000816; KEGG: cpe:CPE1425 pyrrolidone-carboxylate peptidase; PFAM: Peptidase C15, pyroglutamyl peptidase I; PRIAM: Pyroglutamyl-peptidase I; SPTR: Pyrrolidone-carboxylate peptidase; TIGRFAM: Peptidase C15, pyroglutamyl peptidase I; IMG reference gene:2503956735; PFAM: Pyroglutamyl peptidase; TIGRFAM: pyroglutamyl-peptidase I; pyroglutamyl-peptidase I 541255..541896 Sphaerochaeta coccoides DSM 17374 10494746 YP_004411069.1 CDS Spico_0459 NC_015436.1 541898 542326 D InterPro IPR009288; KEGG: cpe:CPE1424 hypothetical protein; PFAM: AIG2-like; SPTR: uncharacterized protein CPE1424; IMG reference gene:2503956736; PFAM: AIG2-like family; AIG2 family protein 541898..542326 Sphaerochaeta coccoides DSM 17374 10494747 YP_004411070.1 CDS Spico_0460 NC_015436.1 542475 543260 D COGs: COG2820 Uridine phosphorylase; InterPro IPR000845:IPR010058; KEGG: spa:M6_Spy1599 uridine phosphorylase; PFAM: Nucleoside phosphorylase domain; PRIAM: Uridine phosphorylase; SPTR: uncharacterized protein; TIGRFAM: Uridine phosphorylase; IMG reference gene:2503956737; PFAM: Phosphorylase superfamily; TIGRFAM: uridine phosphorylase; uridine phosphorylase 542475..543260 Sphaerochaeta coccoides DSM 17374 10494748 YP_004411071.1 CDS Spico_0461 NC_015436.1 543278 543643 R KEGG: nvi:100118784 similar to ENSANGP00000010411; SPTR: Two-component system sensor histidine kinase/response regulator hybrid; IMG reference gene:2503956738; hypothetical protein complement(543278..543643) Sphaerochaeta coccoides DSM 17374 10494749 YP_004411072.1 CDS Spico_0462 NC_015436.1 543826 544389 D KEGG: clo:HMPREF0868_0782 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956739; hypothetical protein 543826..544389 Sphaerochaeta coccoides DSM 17374 10494750 YP_004411073.1 CDS Spico_0463 NC_015436.1 544423 544854 D COGs: COG0716 Flavodoxins; InterPro IPR008254:IPR010087; KEGG: emi:Emin_0878 flavodoxin; PFAM: Flavodoxin/nitric oxide synthase; SPTR: uncharacterized protein; TIGRFAM: Flavodoxin, short chain; IMG reference gene:2503956740; PFAM: Flavodoxin; TIGRFAM: flavodoxin, short chain; flavodoxin 544423..544854 Sphaerochaeta coccoides DSM 17374 10494751 YP_004411074.1 CDS Spico_0464 NC_015436.1 545070 546122 D COGs: COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis; HAMAP: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; InterPro IPR004588; KEGG: sta:STHERM_c12020 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; SPTR: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; IMG reference gene:2503956741; PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 545070..546122 Sphaerochaeta coccoides DSM 17374 10494752 YP_004411075.1 CDS Spico_0465 NC_015436.1 546125 548962 D COGs: COG0178 Excinuclease ATPase subunit; HAMAP: Excinuclease ABC, A subunit; InterPro IPR004602:IPR003439; KEGG: ssm:Spirs_2452 excinuclease ABC, A subunit; PFAM: ABC transporter-like; SPTR: Excinuclease ABC, subunit A; TIGRFAM: Excinuclease ABC, A subunit; IMG reference gene:2503956742; PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit; excinuclease ABC subunit A 546125..548962 Sphaerochaeta coccoides DSM 17374 10494753 YP_004411076.1 CDS Spico_0466 NC_015436.1 548959 552207 D KEGG: ssm:Spirs_2451 organic solvent tolerance protein OstA; SPTR: uncharacterized protein; IMG reference gene:2503956743; hypothetical protein 548959..552207 Sphaerochaeta coccoides DSM 17374 10494754 YP_004411077.1 CDS Spico_0467 NC_015436.1 552215 553237 D COGs: COG1702 Phosphate starvation-inducible protein PhoH predicted ATPase; InterPro IPR003714; KEGG: ssm:Spirs_2450 PhoH family protein; PFAM: PhoH-like protein; SPTR: PhoH-like protein; IMG reference gene:2503956744; PFAM: PhoH-like protein; PhoH family protein 552215..553237 Sphaerochaeta coccoides DSM 17374 10494755 YP_004411078.1 CDS Spico_0468 NC_015436.1 553234 555507 D COGs: COG1480 membrane-associated HD superfamily hydrolase; InterPro IPR006674:IPR006675:IPR003607; KEGG: ssm:Spirs_2449 7TM receptor with intracellular metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: HD domain protein; TIGRFAM: Uncharacterised protein family HDIG; IMG reference gene:2503956745; PFAM: 7TM-HD extracellular; HD domain; 7TM receptor with intracellular HD hydrolase; TIGRFAM: uncharacterized domain HDIG; metal dependent phosphohydrolase 553234..555507 Sphaerochaeta coccoides DSM 17374 10494756 YP_004411079.1 CDS Spico_0469 NC_015436.1 555504 555965 D COGs: COG0319 metal-dependent hydrolase; HAMAP: Uncharacterised protein family UPF0054, metalloprotease YbeY, predicted; InterPro IPR002036; KEGG: tde:TDE1242 metalloprotease; PFAM: Uncharacterised protein family UPF0054, metalloprotease YbeY, predicted; SPTR: metalloprotease TDE_1242; TIGRFAM: Uncharacterised protein family UPF0054, metalloprotease YbeY, predicted; IMG reference gene:2503956746; PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family; metalloprotease ybeY 555504..555965 Sphaerochaeta coccoides DSM 17374 10494757 YP_004411080.1 CDS Spico_0470 NC_015436.1 555969 556751 D COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR000644:IPR005170; KEGG: ssm:Spirs_2447 transporter-associated region; PFAM: Cystathionine beta-synthase, core; Transporter-associated domain; SPTR: Hemolysin C; IMG reference gene:2503956747; PFAM: CBS domain; Transporter associated domain; hypothetical protein 555969..556751 Sphaerochaeta coccoides DSM 17374 10494758 YP_004411081.1 CDS Spico_0471 NC_015436.1 556825 557832 D COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterPro IPR020828:IPR020829:IPR006424; KEGG: bhr:BH0057 glyceraldehyde 3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; SPTR: Glyceraldehyde 3-phosphate dehydrogenase; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; IMG reference gene:2503956748; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; glyceraldehyde-3-phosphate dehydrogenase 556825..557832 Sphaerochaeta coccoides DSM 17374 10494759 YP_004411082.1 CDS Spico_0472 NC_015436.1 557903 559087 D COGs: COG0126 3-phosphoglycerate kinase; HAMAP: Phosphoglycerate kinase; InterPro IPR001576; KEGG: ssm:Spirs_2444 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; PRIAM: Phosphoglycerate kinase; SPTR: Phosphoglycerate kinase; IMG reference gene:2503956749; PFAM: Phosphoglycerate kinase; phosphoglycerate kinase 557903..559087 Sphaerochaeta coccoides DSM 17374 10494760 YP_004411083.1 CDS Spico_0473 NC_015436.1 559087 559845 D COGs: COG0149 Triosephosphate isomerase; InterPro IPR000652; KEGG: sta:STHERM_c09810 triosephosphate isomerase; PFAM: Triosephosphate isomerase; PRIAM: Triose-phosphate isomerase; SPTR: Triosephosphate isomerase; TIGRFAM: Triosephosphate isomerase; IMG reference gene:2503956750; PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; triosephosphate isomerase 559087..559845 Sphaerochaeta coccoides DSM 17374 10494761 YP_004411084.1 CDS Spico_0474 NC_015436.1 559860 560213 D InterPro IPR004692; KEGG: tde:TDE1238 preprotein translocase subunit SecG; PFAM: Preprotein translocase SecG subunit; SPTR: Preprotein translocase subunit SecG; TIGRFAM: Preprotein translocase SecG subunit; IMG reference gene:2503956751; PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit; preprotein translocase subunit SecG 559860..560213 Sphaerochaeta coccoides DSM 17374 10494762 YP_004411085.1 CDS Spico_0475 NC_015436.1 560234 560422 D KEGG: bfo:BRAFLDRAFT_98883 hypothetical protein; manually curated; IMG reference gene:2503956752; hypothetical protein 560234..560422 Sphaerochaeta coccoides DSM 17374 10494763 YP_004411086.1 CDS Spico_0476 NC_015436.1 560377 560847 D KEGG: ssm:Spirs_2441 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956753; hypothetical protein 560377..560847 Sphaerochaeta coccoides DSM 17374 10494764 YP_004411087.1 CDS Spico_0477 NC_015436.1 560898 561962 D InterPro IPR015391:IPR000297; KEGG: ssm:Spirs_2440 PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SurA N-terminal; SPTR: Basic membrane protein; IMG reference gene:2503956754; PFAM: SurA N-terminal domain; PPIC-type PPIASE domain; PpiC-type peptidyl-prolyl cis-trans isomerase 560898..561962 Sphaerochaeta coccoides DSM 17374 10494765 YP_004411088.1 CDS Spico_0478 NC_015436.1 562068 562484 D COGs: COG0781 Transcription termination factor; InterPro IPR006027; KEGG: tde:TDE1657 transcription antitermination protein NusB; PFAM: NusB/RsmB/TIM44; SPTR: N utilization substance protein B homolog; IMG reference gene:2503956755; PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB; NusB antitermination factor 562068..562484 Sphaerochaeta coccoides DSM 17374 10494766 YP_004411089.1 CDS Spico_0479 NC_015436.1 562518 563279 D COGs: COG0024 Methionine aminopeptidase; InterPro IPR000994:IPR002467; KEGG: ssm:Spirs_2437 methionine aminopeptidase, type I; PFAM: Peptidase M24, structural domain; PRIAM: Methionyl aminopeptidase; SPTR: Methionine aminopeptidase; TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1; IMG reference gene:2503956756; PFAM: Metallopeptidase M24; TIGRFAM: methionine aminopeptidase, type I; methionine aminopeptidase 562518..563279 Sphaerochaeta coccoides DSM 17374 10494767 YP_004411090.1 CDS Spico_0480 NC_015436.1 563298 563915 D COGs: COG2236 phosphoribosyltransferase; KEGG: ssm:Spirs_2435 phosphoribosyl transferase domain protein; SPTR: Phosphoribosyl transferase domain protein; IMG reference gene:2503956757; PFAM: Phosphoribosyl transferase domain; phosphoribosyl transferase domain-containing protein 563298..563915 Sphaerochaeta coccoides DSM 17374 10494768 YP_004411091.1 CDS Spico_0481 NC_015436.1 564021 565010 R KEGG: mxa:MXAN_2109 hyalin repeat-containing protein; SPTR: Hyalin repeat protein; IMG reference gene:2503956758; hypothetical protein complement(564021..565010) Sphaerochaeta coccoides DSM 17374 10494769 YP_004411092.1 CDS Spico_0482 NC_015436.1 565021 565668 R KEGG: ssm:Spirs_2430 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956759; hypothetical protein complement(565021..565668) Sphaerochaeta coccoides DSM 17374 10494770 YP_004411093.1 CDS Spico_0483 NC_015436.1 565831 566724 D COGs: COG0190 5 10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; HAMAP: Tetrahydrofolate dehydrogenase/cyclohydrolase; InterPro IPR000672:IPR020630:IPR020631; KEGG: amu:Amuc_1641 methenyltetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; PRIAM: Methenyltetrahydrofolate cyclohydrolase; SPTR: Bifunctional protein folD; IMG reference gene:2503956760; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; 5,10-methylene-tetrahydrofolate dehydrogenase 565831..566724 Sphaerochaeta coccoides DSM 17374 10494771 YP_004411094.1 CDS Spico_0484 NC_015436.1 566721 568052 D COGs: COG0621 2-methylthioadenine synthetase; InterProIPR013848:IPR007197:IPR005839:IPR006463:IPR 006638; KEGG: ssm:Spirs_2426 tRNA-i(6)A37 thiotransferase enzyme MiaB; PFAM: Methylthiotransferase, N-terminal; Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: uncharacterized protein; TIGRFAM: tRNA-i(6)A37 modification enzyme MiaB; Methylthiotransferase; IMG reference gene:2503956761; PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; radical SAM methylthiotransferase, MiaB/RimO family; tRNA-i(6)A37 thiotransferase enzyme MiaB 566721..568052 Sphaerochaeta coccoides DSM 17374 10494772 YP_004411095.1 CDS Spico_0485 NC_015436.1 568062 568910 D COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: dtu:Dtur_1771 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Short-chain dehydrogenase/reductase SDR; IMG reference gene:2503956762; PFAM: short chain dehydrogenase; 3-oxoacyl-ACP reductase 568062..568910 Sphaerochaeta coccoides DSM 17374 10494773 YP_004411096.1 CDS Spico_0486 NC_015436.1 568939 569700 D COGs: COG0846 NAD-dependent protein deacetylase SIR2 family; HAMAP: NAD-dependent histone deacetylase, silent information regulator Sir2; InterPro IPR003000; KEGG: mbu:Mbur_0627 silent information regulator protein Sir2; PFAM: NAD-dependent histone deacetylase, silent information regulator Sir2; SPTR: Silent information regulator protein Sir2; IMG reference gene:2503956763; PFAM: Sir2 family; NAD-dependent deacetylase 568939..569700 Sphaerochaeta coccoides DSM 17374 10494774 YP_004411097.1 CDS Spico_0487 NC_015436.1 570287 570952 D KEGG: vsp:VS_II1427 hypothetical protein; SPTR: Nucleoside recognition domain protein; IMG reference gene:2503956765; PFAM: Nucleoside recognition; hypothetical protein 570287..570952 Sphaerochaeta coccoides DSM 17374 10494776 YP_004411098.1 CDS Spico_0488 NC_015436.1 570967 571461 D KEGG: dda:Dd703_2631 hypothetical protein; SPTR: Nucleoside recognition domain protein; IMG reference gene:2503956766; PFAM: Nucleoside recognition; hypothetical protein 570967..571461 Sphaerochaeta coccoides DSM 17374 10494777 YP_004411099.1 CDS Spico_0489 NC_015436.1 571477 572907 D COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR002933:IPR011650:IPR010168; KEGG: tpe:Tpen_1350 amidohydrolase; PFAM: Peptidase M20, dimerisation; Peptidase M20; SPTR: Amidohydrolase; TIGRFAM: Peptidase M20D, amidohydrolase; IMG reference gene:2503956767; PFAM: Peptidase dimerisation domain; TIGRFAM: amidohydrolase; amidohydrolase 571477..572907 Sphaerochaeta coccoides DSM 17374 10494778 YP_004411100.1 CDS Spico_0490 NC_015436.1 572931 573641 D KEGG: cdl:CDR20291_2752 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956768; hypothetical protein 572931..573641 Sphaerochaeta coccoides DSM 17374 10494779 YP_004411101.1 CDS Spico_0491 NC_015436.1 573651 574340 D KEGG: oih:OB0952 hypothetical protein; SPTR: uncharacterized protein OB0952; IMG reference gene:2503956769; hypothetical protein 573651..574340 Sphaerochaeta coccoides DSM 17374 10494780 YP_004411102.1 CDS Spico_0492 NC_015436.1 574403 575407 R COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: msv:Mesil_0673 transcriptional regulator, LacI family; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI; SPTR: Transcriptional regulator, LacI family; IMG reference gene:2503956770; PFAM: Bacterial regulatory proteins, lacI family; family; LacI family transcriptional regulator complement(574403..575407) Sphaerochaeta coccoides DSM 17374 10494781 YP_004411103.1 CDS Spico_0493 NC_015436.1 575462 576349 R COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: gym:GYMC10_4741 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503956771; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 2 complement(575462..576349) Sphaerochaeta coccoides DSM 17374 10494782 YP_004411104.1 CDS Spico_0494 NC_015436.1 576361 577290 R COGs: COG4209 ABC-type polysaccharide transport system permease component; InterPro IPR000515; KEGG: gym:GYMC10_4742 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503956772; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 1 complement(576361..577290) Sphaerochaeta coccoides DSM 17374 10494783 YP_004411105.1 CDS Spico_0495 NC_015436.1 577295 578545 R COGs: COG1524 Uncharacterized protein of the AP superfamily; InterPro IPR002591; KEGG: bcv:Bcav_2459 type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; SPTR: Type I phosphodiesterase/nucleotide pyrophosphatase; IMG reference gene:2503956773; PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase; type I phosphodiesterase/nucleotide pyrophosphatase complement(577295..578545) Sphaerochaeta coccoides DSM 17374 10494784 YP_004411106.1 CDS Spico_0496 NC_015436.1 578532 579320 R COGs: COG1387 Histidinol phosphatase and related hydrolase of the PHP family; InterPro IPR004013:IPR003141; KEGG: tko:TK0327 hypothetical protein; PFAM: PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal; SPTR: Phosphohydrolase, PHP family; IMG reference gene:2503956774; PFAM: PHP domain; PHP domain-containing protein complement(578532..579320) Sphaerochaeta coccoides DSM 17374 10494785 YP_004411107.1 CDS Spico_0497 NC_015436.1 579317 581029 R COGs: COG0366 Glycosidase; InterPro IPR006047:IPR006589; KEGG: sta:STHERM_c12800 hypothetical protein; PFAM: Glycosyl hydrolase, family 13, catalytic domain; PRIAM: Sucrose phosphorylase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; SPTR: uncharacterized protein; IMG reference gene:2503956775; PFAM: Alpha amylase, catalytic domain; sucrose phosphorylase complement(579317..581029) Sphaerochaeta coccoides DSM 17374 10494786 YP_004411108.1 CDS Spico_0498 NC_015436.1 581050 582171 R KEGG: rrs:RoseRS_2835 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956776; PFAM: Protein of unknown function (DUF2961); hypothetical protein complement(581050..582171) Sphaerochaeta coccoides DSM 17374 10494787 YP_004411109.1 CDS Spico_0499 NC_015436.1 582175 583107 R COGs: COG2333 hydrolase (metallo-beta-lactamase superfamily); InterPro IPR001279; KEGG: ppd:Ppro_1379 DNA internalization-related competence protein ComEC/Rec2; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; SPTR: DNA internalization-related competence protein ComEC/Rec2; IMG reference gene:2503956777; PFAM: Metallo-beta-lactamase superfamily; beta-lactamase domain-containing protein complement(582175..583107) Sphaerochaeta coccoides DSM 17374 10494788 YP_004411110.1 CDS Spico_0500 NC_015436.1 583184 584779 R COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: gym:GYMC10_0760 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein family 1; IMG reference gene:2503956778; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein complement(583184..584779) Sphaerochaeta coccoides DSM 17374 10494789 YP_004411111.1 CDS Spico_0501 NC_015436.1 585070 585804 D COGs: COG1802 Transcriptional regulators; InterPro IPR000524:IPR011711; KEGG: ssm:Spirs_0802 transcriptional regulator, GntR family; PFAM: HTH transcriptional regulator, GntR; GntR, C-terminal; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal; SPTR: Transcriptional regulator, GntR family; IMG reference gene:2503956779; PFAM: Bacterial regulatory proteins, gntR family; FCD domain; GntR family transcriptional regulator 585070..585804 Sphaerochaeta coccoides DSM 17374 10494790 YP_004411112.1 CDS Spico_0502 NC_015436.1 586067 588334 D COGs: COG0620 Methionine synthase II (cobalamin-independent); HAMAP: Cobalamin-independent methionine synthase; InterPro IPR006276:IPR013215:IPR002629; KEGG: swo:Swol_0933 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; PFAM: Methionine synthase, vitamin-B12 independent; Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal; PRIAM:5-methyltetrahydropteroyltriglutamate--homocy steineS-methyltransferase; SPTR:5-methyltetrahydropteroyltriglutamate--homocys teinemethyltransferase; TIGRFAM: Cobalamin-independent methionine synthase; IMG reference gene:2503956780; PFAM: Cobalamin-independent synthase, N-terminal domain; Cobalamin-independent synthase, Catalytic domain; TIGRFAM: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; methionine synthase (B12-independent) 586067..588334 Sphaerochaeta coccoides DSM 17374 10494791 YP_004411113.1 CDS Spico_0503 NC_015436.1 588334 589191 D COGs: COG0685 5 10-methylenetetrahydrofolate reductase; InterPro IPR003171:IPR004620; KEGG: swo:Swol_0934 5,10-methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase; PRIAM: Methylenetetrahydrofolate reductase (NAD(P)H); SPTR: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; IMG reference gene:2503956781; PFAM: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase, prokaryotic form; 5,10-methylenetetrahydrofolate reductase 588334..589191 Sphaerochaeta coccoides DSM 17374 10494792 YP_004411114.1 CDS Spico_0504 NC_015436.1 589242 590165 R COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR005119; KEGG: swo:Swol_0935 LysR-type transcriptional regulator; PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; SPTR: LysR-type transcriptional regulator; IMG reference gene:2503956782; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; LysR family transcriptional regulator complement(589242..590165) Sphaerochaeta coccoides DSM 17374 10494793 YP_004411115.1 CDS Spico_0505 NC_015436.1 590162 590842 R KEGG: bhy:BHWA1_00761 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956783; hypothetical protein complement(590162..590842) Sphaerochaeta coccoides DSM 17374 10494794 YP_004411116.1 CDS Spico_0506 NC_015436.1 591090 591347 D InterPro IPR006628; KEGG: ssm:Spirs_1866 PUR-alpha/beta/gamma DNA/RNA-binding protein; SMART: PUR-alpha/beta/gamma, DNA/RNA-binding; SPTR: uncharacterized protein; IMG reference gene:2503956784; PFAM: Protein of unknown function (DUF3276); PUR-alpha/beta/gamma DNA/RNA-binding protein 591090..591347 Sphaerochaeta coccoides DSM 17374 10494795 YP_004411117.1 CDS Spico_0507 NC_015436.1 591342 591974 R COGs: COG0164 Ribonuclease HII; InterPro IPR001352; KEGG: alv:Alvin_2058 ribonuclease H; PFAM: Ribonuclease HII/HIII; PRIAM: Ribonuclease H; SPTR: Ribonuclease; IMG reference gene:2503956785; PFAM: Ribonuclease HII; Ribonuclease H complement(591342..591974) Sphaerochaeta coccoides DSM 17374 10494796 YP_004411118.1 CDS Spico_0508 NC_015436.1 592090 594936 D COGs: COG1196 Chromosome segregation ATPase; InterPro IPR003395; KEGG: ssm:Spirs_1868 chromosome segregation protein SMC; PFAM: RecF/RecN/SMC; SPTR: Chromosome partition protein SmC, ; IMG reference gene:2503956786; PFAM: RecF/RecN/SMC N terminal domain; SMC domain-containing protein 592090..594936 Sphaerochaeta coccoides DSM 17374 10494797 YP_004411119.1 CDS Spico_0509 NC_015436.1 595024 596358 D COGs: COG0541 Signal recognition particle GTPase; InterProIPR013822:IPR000897:IPR004125:IPR004780:IPR 003593; KEGG: ssm:Spirs_1871 signal recognition particle protein; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; Signal recognition particle, SRP54 subunit, M-domain; SMART: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; ATPase, AAA+ type, core; SPTR: Signal recognition particle protein; TIGRFAM: Signal recognition particle, SRP; IMG reference gene:2503956787; PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein; signal recognition particle subunit FFH/SRP54 (srp54) 595024..596358 Sphaerochaeta coccoides DSM 17374 10494798 YP_004411120.1 CDS Spico_0510 NC_015436.1 596398 596664 D COGs: COG0228 Ribosomal protein S16; HAMAP: Ribosomal protein S16; InterPro IPR000307; KEGG: ssm:Spirs_1872 ribosomal protein S16; PFAM: Ribosomal protein S16; SPTR: 30S ribosomal protein S16; TIGRFAM: Ribosomal protein S16; IMG reference gene:2503956788; PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; 30S ribosomal protein S16 596398..596664 Sphaerochaeta coccoides DSM 17374 10494799 YP_004411121.1 CDS Spico_0511 NC_015436.1 596683 596916 D COGs: COG1837 RNA-binding protein (contains KH domain); HAMAP: Uncharacterised protein family UPF0109, bacterial; InterPro IPR020627; KEGG: ssm:Spirs_1873 R-binding protein (contains KH domain); SPTR: Nucleic acid binding protein, containing KH domain; IMG reference gene:2503956789; PFAM: KH domain; RNA-binding protein 596683..596916 Sphaerochaeta coccoides DSM 17374 10494800 YP_004411122.1 CDS Spico_0512 NC_015436.1 596918 597439 D COGs: COG0806 RimM protein required for 16S rRNA processing; HAMAP: 16S rRNA processing protein RimM; InterPro IPR011961:IPR002676:IPR007903; KEGG: sta:STHERM_c10550 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel; SPTR: 16S rRNA processing protein RimM; TIGRFAM: 16S rRNA processing protein RimM; IMG reference gene:2503956790; PFAM: RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM; Ribosome maturation factor rimM 596918..597439 Sphaerochaeta coccoides DSM 17374 10494801 YP_004411123.1 CDS Spico_0513 NC_015436.1 597436 598167 D COGs: COG0336 tRNA-(guanine-N1)-methyltransferase; HAMAP: tRNA (guanine-N1-)-methyltransferase, bacteria; InterPro IPR002649:IPR016009; KEGG: ssm:Spirs_1875 tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; PRIAM: tRNA (guanine-N(1)-)-methyltransferase; SPTR: tRNA (Guanine-N(1)-)-methyltransferase; TIGRFAM: tRNA (guanine-N1-)-methyltransferase, bacteria; IMG reference gene:2503956791; PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; tRNA (Guanine37-N(1)-) methyltransferase 597436..598167 Sphaerochaeta coccoides DSM 17374 10494802 YP_004411124.1 CDS Spico_0514 NC_015436.1 598172 598540 D COGs: COG0335 Ribosomal protein L19; HAMAP: Ribosomal protein L19; InterPro IPR001857; KEGG: ssm:Spirs_1876 ribosomal protein L19; PFAM: Ribosomal protein L19; SPTR: 50S ribosomal protein L19; TIGRFAM: Ribosomal protein L19; IMG reference gene:2503956792; PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type; 50S ribosomal protein L19 598172..598540 Sphaerochaeta coccoides DSM 17374 10494803 YP_004411125.1 CDS Spico_0515 NC_015436.1 598725 599105 D COGs: COG0792 endonuclease distantly related to Holliday junction resolvase; HAMAP: Uncharacterised protein family UPF0102; InterPro IPR003509; KEGG: cyh:Cyan8802_3919 protein of unknown function UPF0102; PFAM: Uncharacterised protein family UPF0102; SPTR: UPF0102 protein Cyan8802_3919; IMG reference gene:2503956793; PFAM: Uncharacterised protein family UPF0102; hypothetical protein 598725..599105 Sphaerochaeta coccoides DSM 17374 10494804 YP_004411126.1 CDS Spico_0516 NC_015436.1 599089 599604 D KEGG: tde:TDE2305 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956794; hypothetical protein 599089..599604 Sphaerochaeta coccoides DSM 17374 10494805 YP_004411127.1 CDS Spico_0517 NC_015436.1 599601 600101 D COGs: COG0669 Phosphopantetheine adenylyltransferase; HAMAP: Coenzyme A biosynthesis protein; InterPro IPR001980:IPR004820:IPR004821; KEGG: ssm:Spirs_1886 pantetheine-phosphate adenylyltransferase; PFAM: Cytidylyltransferase; PRIAM: Pantetheine-phosphate adenylyltransferase; SPTR: Phosphopantetheine adenylyltransferase; TIGRFAM: Coenzyme A biosynthesis protein; Cytidyltransferase-related; IMG reference gene:2503956795; PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain; Phosphopantetheine adenylyltransferase 599601..600101 Sphaerochaeta coccoides DSM 17374 10494806 YP_004411128.1 CDS Spico_0518 NC_015436.1 600157 600345 D COGs: COG0333 Ribosomal protein L32; HAMAP: Ribosomal protein L32p; InterPro IPR002677; KEGG: ssm:Spirs_1887 ribosomal protein L32; PFAM: Ribosomal protein L32p; SPTR: 50S ribosomal protein L32; TIGRFAM: Ribosomal protein L32p; IMG reference gene:2503956796; PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32; 50S ribosomal protein L32 600157..600345 Sphaerochaeta coccoides DSM 17374 10494807 YP_004411129.1 CDS Spico_0519 NC_015436.1 600362 600601 D COGs: COG0236 Acyl carrier protein; HAMAP: Acyl carrier protein (ACP); InterPro IPR003231:IPR006163; KEGG: sta:STHERM_c10660 hypothetical protein; PFAM: Phosphopantetheine-binding; SPTR: uncharacterized protein; TIGRFAM: Acyl carrier protein (ACP); IMG reference gene:2503956797; PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein; acyl carrier protein 600362..600601 Sphaerochaeta coccoides DSM 17374 10494808 YP_004411130.1 CDS Spico_0520 NC_015436.1 600617 601387 D COGs: COG0571 dsRNA-specific ribonuclease; HAMAP: Ribonuclease III, bacterial; InterPro IPR011907:IPR000999:IPR001159; KEGG: ssm:Spirs_1889 ribonuclease III; PFAM: Ribonuclease III; Double-stranded RNA-binding; PRIAM: Ribonuclease III; SMART: Ribonuclease III; Double-stranded RNA-binding; SPTR: Ribonuclease 3; TIGRFAM: Ribonuclease III, bacterial; IMG reference gene:2503956798; PFAM: RNase3 domain; Double-stranded RNA binding motif; TIGRFAM: ribonuclease III, bacterial; RNAse III 600617..601387 Sphaerochaeta coccoides DSM 17374 10494809 YP_004411131.1 CDS Spico_0521 NC_015436.1 601501 602928 R COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR002646:IPR006674:IPR006675; KEGG: ssm:Spirs_1890 polynucleotide adenylyltransferase/metal dependent phosphohydrolase; PFAM: Poly A polymerase, head domain; Metal-dependent phosphohydrolase, HD subdomain; PRIAM: tRNA cytidylyltransferase; SPTR: tRNA adenylyltransferase; TIGRFAM: Uncharacterised protein family HDIG; IMG reference gene:2503956799; PFAM: HD domain; Poly A polymerase head domain; polynucleotide adenylyltransferase complement(601501..602928) Sphaerochaeta coccoides DSM 17374 10494810 YP_004411132.1 CDS Spico_0522 NC_015436.1 603030 606164 D COGs: COG0060 Isoleucyl-tRNA synthetase; HAMAP: Isoleucyl-tRNA synthetase, class Ia; InterPro IPR002301:IPR002300:IPR013155; KEGG: ssm:Spirs_1894 isoleucyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ia; Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding; PRIAM: Isoleucine--tRNA ligase; SPTR: Isoleucyl-tRNA synthetase; TIGRFAM: Isoleucyl-tRNA synthetase, class Ia; IMG reference gene:2503956800; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 603030..606164 Sphaerochaeta coccoides DSM 17374 10494811 YP_004411133.1 CDS Spico_0523 NC_015436.1 606168 607103 D KEGG: tbd:Tbd_1366 diguanylate cyclase/phosphodiesterase; SPTR: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S); IMG reference gene:2503956801; hypothetical protein 606168..607103 Sphaerochaeta coccoides DSM 17374 10494812 YP_004411134.1 CDS Spico_0524 NC_015436.1 607117 608334 R COGs: COG0301 Thiamine biosynthesis ATP pyrophosphatase; HAMAP: Thiamine biosynthesis protein; InterPro IPR003720:IPR004114:IPR020536; KEGG: ssm:Spirs_1899 thiamine biosynthesis/tRNA modification protein ThiI; PFAM: Thiamine biosynthesis protein, C-terminal; THUMP; SMART: THUMP; SPTR: Probable thiamine biosynthesis protein ThiI; TIGRFAM: Thiamine biosynthesis protein; IMG reference gene:2503956802; PFAM: Thiamine biosynthesis protein (ThiI); THUMP domain; TIGRFAM: thiazole biosynthesis/tRNA modification protein ThiI; tRNA sulfurtransferase complement(607117..608334) Sphaerochaeta coccoides DSM 17374 10494813 YP_004411135.1 CDS Spico_0525 NC_015436.1 608334 609596 R COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR000192; KEGG: sta:STHERM_c15870 cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Cysteine desulfurase; SPTR: Cysteine desulfurase; IMG reference gene:2503956803; PFAM: Aminotransferase class-V; cysteine desulfurase complement(608334..609596) Sphaerochaeta coccoides DSM 17374 10494814 YP_004411136.1 CDS Spico_0526 NC_015436.1 609613 610680 D COGs: COG0337 3-dehydroquinate synthetase; InterPro IPR002658; KEGG: ssm:Spirs_1902 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase AroB; PRIAM: 3-dehydroquinate synthase; SPTR: 3-dehydroquinate synthase; IMG reference gene:2503956804; PFAM: 3-dehydroquinate synthase; 3-dehydroquinate synthase 609613..610680 Sphaerochaeta coccoides DSM 17374 10494815 YP_004411137.1 CDS Spico_0527 NC_015436.1 610722 613343 R COGs: COG1643 HrpA-like helicase; InterPro IPR001650:IPR007502:IPR011709:IPR014001; KEGG: ssm:Spirs_1903 protein of unknown function DUF1605; PFAM: Domain of unknown function DUF1605; Helicase-associated domain; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; Helicase-associated domain; SPTR: uncharacterized protein; IMG reference gene:2503956805; PFAM: Helicase conserved C-terminal domain; Helicase associated domain (HA2); DEAD/DEAH box helicase; Domain of unknown function (DUF1605); TIGRFAM: ATP-dependent helicase HrpA; hypothetical protein complement(610722..613343) Sphaerochaeta coccoides DSM 17374 10494816 YP_004411138.1 CDS Spico_0528 NC_015436.1 613340 614641 R COGs: COG0124 Histidyl-tRNA synthetase; HAMAP: Histidyl-tRNA synthetase, class IIa, subgroup; InterPro IPR015807:IPR002314:IPR004154; KEGG: ssm:Spirs_1904 histidyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Anticodon-binding; PRIAM: Histidine--tRNA ligase; SPTR: Histidyl-tRNA synthetase; TIGRFAM: Histidyl-tRNA synthetase, class IIa, subgroup; IMG reference gene:2503956806; PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase; histidyl-tRNA synthetase complement(613340..614641) Sphaerochaeta coccoides DSM 17374 10494817 YP_004411139.1 CDS Spico_0529 NC_015436.1 614765 616096 D COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR002646:IPR010206; KEGG: ssm:Spirs_1905 poly(A) polymerase; PFAM: Poly A polymerase, head domain; PRIAM: Polynucleotide adenylyltransferase; SPTR: PolyA polymerase; TIGRFAM: Poly(A) polymerase, PcnB; IMG reference gene:2503956807; PFAM: Poly A polymerase head domain; TIGRFAM: poly(A) polymerase; poly(A) polymerase 614765..616096 Sphaerochaeta coccoides DSM 17374 10494818 YP_004411140.1 CDS Spico_0530 NC_015436.1 616129 617001 R KEGG: ssm:Spirs_1907 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956808; hypothetical protein complement(616129..617001) Sphaerochaeta coccoides DSM 17374 10494819 YP_004411141.1 CDS Spico_0531 NC_015436.1 617123 618439 D COGs: COG4656 NADH:ubiquinone oxidoreductase subunit RnfC; InterPro IPR011538:IPR019554:IPR001450:IPR010208; KEGG: ssm:Spirs_1909 electron transport complex, RnfABCDGE type, C subunit; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; 4Fe-4S binding domain; SPTR: Transporter; TIGRFAM: Electron transport complex, RnfC; manually curated; IMG reference gene:2503956809; PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; RnfABCDGE type electron transport complex subunit C 617123..618439 Sphaerochaeta coccoides DSM 17374 10494820 YP_004411142.1 CDS Spico_0532 NC_015436.1 618441 619805 D COGs: COG4658 NADH:ubiquinone oxidoreductase subunit RnfD; InterPro IPR004338:IPR011303; KEGG: ssm:Spirs_1910 electron transport complex, RnfABCDGE type, D subunit; PFAM: NADH-quinone reductase NQR2/RnfD; SPTR: Electron transport complex, D subunit; TIGRFAM: Electron transport complex, RnfD; IMG reference gene:2503956810; PFAM: NQR2, RnfD, RnfE family; RnfABCDGE type electron transport complex subunit D 618441..619805 Sphaerochaeta coccoides DSM 17374 10494821 YP_004411143.1 CDS Spico_0533 NC_015436.1 619802 620362 D InterPro IPR007329; KEGG: ssm:Spirs_1911 FMN-binding domain protein; PFAM: FMN-binding; SMART: FMN-binding; SPTR: Electron transport complex, rnfabcdGe type, g subunit; IMG reference gene:2503956811; PFAM: FMN-binding domain; FMN-binding domain-containing protein 619802..620362 Sphaerochaeta coccoides DSM 17374 10494822 YP_004411144.1 CDS Spico_0534 NC_015436.1 620362 620997 D COGs: COG4660 NADH:ubiquinone oxidoreductase subunit RnfE; InterPro IPR003667; KEGG: ssm:Spirs_1912 electron transport complex, RnfABCDGE type, E subunit; PFAM: Electron transport complex, Rnf/Nqr; SPTR: Electron transport complex, RnfABCDGE type, E subunit; IMG reference gene:2503956812; PFAM: Rnf-Nqr subunit, membrane protein; RnfA-Nqr electron transport subunit 620362..620997 Sphaerochaeta coccoides DSM 17374 10494823 YP_004411145.1 CDS Spico_0535 NC_015436.1 620994 621584 D COGs: COG4657 NADH:ubiquinone oxidoreductase subunit RnfA; KEGG: ssm:Spirs_1913 electron transport complex, RnfABCDGE type, A subunit; SPTR: Na(+)-translocating NADH-quinone reductase subunit E; IMG reference gene:2503956813; PFAM: Rnf-Nqr subunit, membrane protein; RnfABCDGE type electron transport complex subunit A 620994..621584 Sphaerochaeta coccoides DSM 17374 10494824 YP_004411146.1 CDS Spico_0536 NC_015436.1 621853 623751 D InterPro IPR004300:IPR015179; KEGG: ssm:Spirs_1915 4-alpha-glucanotransferase; PFAM: Glycoside hydrolase, family 57, N-terminal; Alpha-amylase/4-alpha-glucanotransferase, C-terminal; SPTR: 4-alpha-glucanotransferase; IMG reference gene:2503956814; PFAM: Glycosyl hydrolase 57; Domain of unknown function (DUF1926); glycoside hydrolase 57 621853..623751 Sphaerochaeta coccoides DSM 17374 10494825 YP_004411147.1 CDS Spico_0537 NC_015436.1 623776 624886 D KEGG: bfa:Bfae_13220 4-alpha-glucanotransferase; SPTR: Peptide chain release factor 2; manually curated; IMG reference gene:2503956815; PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2; peptide chain release factor 2 join(623776..623844,623846..624886) Sphaerochaeta coccoides DSM 17374 10494826 YP_004411148.1 CDS Spico_0538 NC_015436.1 624895 626223 D KEGG: mhu:Mhun_2300 PEGA; SPTR: PEGA; IMG reference gene:2503956816; hypothetical protein 624895..626223 Sphaerochaeta coccoides DSM 17374 10494827 YP_004411149.1 CDS Spico_0539 NC_015436.1 626240 627106 D COGs: COG0552 Signal recognition particle GTPase; InterPro IPR013822:IPR000897:IPR004390:IPR003593; KEGG: ssm:Spirs_1921 signal recognition particle-docking protein FtsY; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; SMART: Signal recognition particle, SRP54 subunit, GTPase; ATPase, AAA+ type, core; Signal recognition particle, SRP54 subunit, helical bundle; SPTR: Signal recognition particle-docking protein FtsY; TIGRFAM: Cell division transporter substrate-binding protein FtsY; IMG reference gene:2503956817; PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY; signal recognition particle-docking protein FtsY 626240..627106 Sphaerochaeta coccoides DSM 17374 10494828 YP_004411150.1 CDS Spico_0540 NC_015436.1 627128 628366 D COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: sta:STHERM_c12430 lipoprotein releasing system, permease; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: lipoprotein releasing system, permease; IMG reference gene:2503956818; PFAM: Predicted permease; hypothetical protein 627128..628366 Sphaerochaeta coccoides DSM 17374 10494829 YP_004411151.1 CDS Spico_0541 NC_015436.1 628353 629054 D COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: sta:STHERM_c12420 lipoprotein-releasing system ATP-binding protein LolD; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Lipoprotein-releasing system ATP-binding protein LolD; IMG reference gene:2503956819; PFAM: ABC transporter; phosphonate-transporting ATPase 628353..629054 Sphaerochaeta coccoides DSM 17374 10494830 YP_004411152.1 CDS Spico_0542 NC_015436.1 629051 630238 D COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: ssm:Spirs_1925 protein of unknown function DUF214; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: Lipoprotein releasing system, transmembrane protein, LolC/E family; IMG reference gene:2503956820; PFAM: Predicted permease; hypothetical protein 629051..630238 Sphaerochaeta coccoides DSM 17374 10494831 YP_004411153.1 CDS Spico_0543 NC_015436.1 630311 631237 D COGs: COG1234 Metal-dependent hydrolase of the beta-lactamase superfamily III; HAMAP: Ribonuclease Z; InterPro IPR013471:IPR001279; KEGG: tde:TDE1951 ribonuclease Z; PFAM: Beta-lactamase-like; SPTR: Ribonuclease Z; TIGRFAM: Ribonuclease Z; IMG reference gene:2503956821; PFAM: Metallo-beta-lactamase superfamily; TIGRFAM: ribonuclease Z; RNAse Z 630311..631237 Sphaerochaeta coccoides DSM 17374 10494832 YP_004411154.1 CDS Spico_0544 NC_015436.1 631423 632322 R KEGG: mdi:METDI2989 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956822; hypothetical protein complement(631423..632322) Sphaerochaeta coccoides DSM 17374 10494833 YP_004411155.1 CDS Spico_0545 NC_015436.1 632413 632919 D InterPro IPR007060; KEGG: pay:PAU_00273 hypothetical protein; PFAM: Septum formation initiator; SPTR: uncharacterized protein; IMG reference gene:2503956823; septum formation initiator 632413..632919 Sphaerochaeta coccoides DSM 17374 10494834 YP_004411156.1 CDS Spico_0546 NC_015436.1 632943 633527 D COGs: COG0009 translation factor (SUA5); InterPro IPR006070; KEGG: ssm:Spirs_1938 SUA5/YciO/YrdC/YwlC family protein; PFAM: Sua5/YciO/YrdC, N-terminal; SPTR: Sua5/YciO/YrdC/YwlC family protein; IMG reference gene:2503956824; PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; SUA5/yciO/yrdC domain-containing protein 632943..633527 Sphaerochaeta coccoides DSM 17374 10494835 YP_004411157.1 CDS Spico_0547 NC_015436.1 633517 634839 R InterPro IPR008323; KEGG: ssm:Spirs_1939 hypothetical protein; PFAM: Uncharacterised conserved protein UCP033563; SPTR: uncharacterized protein; IMG reference gene:2503956825; PFAM: Protein of unknown function (DUF1015); hypothetical protein complement(633517..634839) Sphaerochaeta coccoides DSM 17374 10494836 YP_004411158.1 CDS Spico_0548 NC_015436.1 634891 635580 D COGs: COG1564 Thiamine pyrophosphokinase; InterPro IPR007371:IPR006282; KEGG: ssm:Spirs_1940 thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase, catalytic domain; SPTR: uncharacterized protein; TIGRFAM: Thiamin pyrophosphokinase; IMG reference gene:2503956826; PFAM: Thiamin pyrophosphokinase, vitamin B1 binding domain; Thiamin pyrophosphokinase, catalytic domain; TIGRFAM: thiamine pyrophosphokinase; thiamine pyrophosphokinase 634891..635580 Sphaerochaeta coccoides DSM 17374 10494837 YP_004411159.1 CDS Spico_0549 NC_015436.1 635661 636002 D KEGG: cff:CFF8240_1387 polysaccharide biosynthesis protein; SPTR: Polysaccharide biosynthesis protein; IMG reference gene:2503956827; hypothetical protein 635661..636002 Sphaerochaeta coccoides DSM 17374 10494838 YP_004411160.1 CDS Spico_0550 NC_015436.1 636017 636391 D COGs: COG4401 Chorismate mutase; InterPro IPR008243; KEGG: chy:CHY_0473 chorismate mutase; PFAM: Chorismate mutase, AroH class; SPTR: Chorismate mutase; TIGRFAM: Chorismate mutase, AroH class; IMG reference gene:2503956828; PFAM: Chorismate mutase type I; TIGRFAM: monofunctional chorismate mutase, gram positive type, clade 1; chorismate mutase 636017..636391 Sphaerochaeta coccoides DSM 17374 10494839 YP_004411161.1 CDS Spico_0551 NC_015436.1 636852 637013 R KEGG: fbl:Fbal_1981 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; SPTR: Transport ATP-binding protein aarD; IMG reference gene:2503956830; hypothetical protein complement(636852..637013) Sphaerochaeta coccoides DSM 17374 10494841 YP_004411162.1 CDS Spico_0552 NC_015436.1 637193 638275 D COGs: COG0338 Site-specific DNA methylase; InterPro IPR012327; KEGG: lba:Lebu_2246 DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; SPTR: DNA adenine methylase; TIGRFAM: D12 class N6 adenine-specific DNA methyltransferase; IMG reference gene:2503956831; PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam); DNA adenine methylase 637193..638275 Sphaerochaeta coccoides DSM 17374 10494842 YP_004411163.1 CDS Spico_0553 NC_015436.1 638272 639129 D InterPro IPR007637; KEGG: eel:EUBELI_01767 type II restriction enzyme; PFAM: Restriction endonuclease, type II, DpmII-like; PRIAM: Type II site-specific deoxyribonuclease; SPTR: Type II site-specific deoxyribonuclease; IMG reference gene:2503956832; PFAM: DpnII restriction endonuclease; type II site-specific deoxyribonuclease 638272..639129 Sphaerochaeta coccoides DSM 17374 10494843 YP_004411164.1 CDS Spico_0554 NC_015436.1 639126 639863 D COGs: COG1041 DNA modification methylase; InterPro IPR002941; KEGG: lba:Lebu_2245 RNA methylase; PFAM: DNA methylase N-4/N-6; SPTR: DNA methylase N-4/N-6 domain protein; IMG reference gene:2503956833; PFAM: DNA methylase; DNA methylase N-4/N-6 domain-containing protein 639126..639863 Sphaerochaeta coccoides DSM 17374 10494844 YP_004411165.1 CDS Spico_R0016 NC_015436.1 640192 640530 D COGs: COG3070 Regulator of competence-specific genes; InterPro IPR007076; KEGG: pru:PRU_2356 TfoX N-terminal domain-containing protein; PFAM: TfoX, N-terminal; SPTR: uncharacterized protein; tmRNA as predicted by Rfam (RF00023), score 166.26; IMG reference gene:2503956834; PFAM: TfoX N-terminal domain; TfoX domain-containing protein 640192..640530 Sphaerochaeta coccoides DSM 17374 10494845 YP_004411166.1 CDS Spico_0556 NC_015436.1 641322 642209 R COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR005119; KEGG: str:Sterm_1975 transcriptional regulator, LysR family; PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; SPTR: uncharacterized protein; IMG reference gene:2503956835; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; LysR family transcriptional regulator complement(641322..642209) Sphaerochaeta coccoides DSM 17374 10494846 YP_004411167.1 CDS Spico_0557 NC_015436.1 642347 643864 D COGs: COG0656 Aldo/keto reductase related to diketogulonate reductase; InterPro IPR023210; KEGG: ssm:Spirs_1777 aldo/keto reductase; PFAM: NADP-dependent oxidoreductase domain; PRIAM: 2,5-didehydrogluconate reductase; SPTR: uncharacterized protein; IMG reference gene:2503956836; PFAM: Aldo/keto reductase; 2,5-didehydrogluconate reductase 642347..643864 Sphaerochaeta coccoides DSM 17374 10494847 YP_004411168.1 CDS Spico_0558 NC_015436.1 643878 644615 D KEGG: shi:Shel_18140 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956837; hypothetical protein 643878..644615 Sphaerochaeta coccoides DSM 17374 10494848 YP_004411169.1 CDS Spico_0559 NC_015436.1 644656 645207 D COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451; KEGG: cgr:CAGL0K11066g hypothetical protein; PRIAM: Maltose O-acetyltransferase; SPTR: Maltose O-acetyltransferase; IMG reference gene:2503956838; PFAM: Bacterial transferase hexapeptide (three repeats); maltose O-acetyltransferase 644656..645207 Sphaerochaeta coccoides DSM 17374 10494849 YP_004411170.1 CDS Spico_0560 NC_015436.1 645275 645580 D COGs: COG0655 Multimeric flavodoxin WrbA; InterPro IPR005025; KEGG: brm:Bmur_2381 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR: uncharacterized protein; IMG reference gene:2503956839; PFAM: NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 645275..645580 Sphaerochaeta coccoides DSM 17374 10494850 YP_004411171.1 CDS Spico_0561 NC_015436.1 645781 646410 D InterPro IPR001647; KEGG: cpy:Cphy_1864 TetR family transcriptional regulator; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family; IMG reference gene:2503956840; PFAM: Bacterial regulatory proteins, tetR family; TetR family transcriptional regulator 645781..646410 Sphaerochaeta coccoides DSM 17374 10494851 YP_004411172.1 CDS Spico_0562 NC_015436.1 646413 646811 D COGs: COG3976 conserved hypothetical protein; InterPro IPR007329; KEGG: cbe:Cbei_3767 FMN-binding domain-containing protein; PFAM: FMN-binding; SMART: FMN-binding; SPTR: FMN-binding domain protein; IMG reference gene:2503956841; PFAM: FMN-binding domain; FMN-binding domain-containing protein 646413..646811 Sphaerochaeta coccoides DSM 17374 10494852 YP_004411173.1 CDS Spico_0563 NC_015436.1 646811 647353 D KEGG: str:Sterm_3493 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956842; hypothetical protein 646811..647353 Sphaerochaeta coccoides DSM 17374 10494853 YP_004411174.1 CDS Spico_0564 NC_015436.1 647350 648192 D KEGG: lcz:LCAZH_2061 sucrose PTS, EIIBCA; SPTR: uncharacterized protein; IMG reference gene:2503956843; hypothetical protein 647350..648192 Sphaerochaeta coccoides DSM 17374 10494854 YP_004411175.1 CDS Spico_0565 NC_015436.1 648334 649182 D COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: btl:BALH_2607 ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter; IMG reference gene:2503956844; ABC transporter 648334..649182 Sphaerochaeta coccoides DSM 17374 10494855 YP_004411176.1 CDS Spico_0566 NC_015436.1 649183 649869 D KEGG: bth:BT_4430 cytochrome c biogenesis protein (CcsA); SPTR: Permease; IMG reference gene:2503956845; hypothetical protein 649183..649869 Sphaerochaeta coccoides DSM 17374 10494856 YP_004411177.1 CDS Spico_0567 NC_015436.1 649945 650586 D COGs: COG4832 conserved hypothetical protein; InterPro IPR019233; KEGG: mla:Mlab_0505 hypothetical protein; PFAM: Protein of unknown function DUF2174, N-terminal; SPTR: uncharacterized protein; IMG reference gene:2503956846; PFAM: Uncharacterized conserved protein (DUF2174); hypothetical protein 649945..650586 Sphaerochaeta coccoides DSM 17374 10494857 YP_004411178.1 CDS Spico_0568 NC_015436.1 650590 651036 D COGs: COG3871 Uncharacterized stress protein (general stress protein 26); InterPro IPR011576; KEGG: bth:BT_1384 hypothetical protein; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; SPTR: uncharacterized protein; IMG reference gene:2503956847; PFAM: Pyridoxamine 5'-phosphate oxidase; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 650590..651036 Sphaerochaeta coccoides DSM 17374 10494858 YP_004411179.1 CDS Spico_0569 NC_015436.1 651175 651525 D COGs: COG4898 conserved hypothetical protein; InterPro IPR014580; KEGG: dae:Dtox_0463 hypothetical protein; PFAM: Uncharacterised conserved protein UCP033199; SPTR: uncharacterized protein; IMG reference gene:2503956848; PFAM: Uncharacterized protein conserved in bacteria (DUF2200); hypothetical protein 651175..651525 Sphaerochaeta coccoides DSM 17374 10494859 YP_004411180.1 CDS Spico_0570 NC_015436.1 651645 652643 R COGs: COG5621 secreted hydrolase; KEGG: ckr:CKR_2552 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956849; PFAM: Hydroxyneurosporene synthase (CrtC); hypothetical protein complement(651645..652643) Sphaerochaeta coccoides DSM 17374 10494860 YP_004411181.1 CDS Spico_0571 NC_015436.1 652955 653629 D KEGG: ols:Olsu_1506 nitroreductase; SPTR: uncharacterized protein; IMG reference gene:2503956850; nitroreductase 652955..653629 Sphaerochaeta coccoides DSM 17374 10494861 YP_004411182.1 CDS Spico_0572 NC_015436.1 653696 655159 R COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR013027:IPR006005; KEGG: pdi:BDI_0325 glutamate synthase, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: Glutamate synthase (NADPH); SPTR: Glutamate synthase, small subunit; TIGRFAM: Glutamate synthase, NADH/NADPH, small subunit 1; IMG reference gene:2503956851; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthases, NADH/NADPH, small subunit; glutamate synthase (NADH) small subunit complement(653696..655159) Sphaerochaeta coccoides DSM 17374 10494862 YP_004411183.1 CDS Spico_0573 NC_015436.1 655162 659748 R COGs: COG0069 Glutamate synthase domain 2; InterPro IPR000583:IPR006982:IPR002932:IPR002489; KEGG: pdi:BDI_0326 glutamate synthase, large subunit; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal; PRIAM: Glutamate synthase (ferredoxin); SPTR: Glutamate synthase, large subunit; IMG reference gene:2503956852; PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II; glutamate synthase (NADH) large subunit complement(655162..659748) Sphaerochaeta coccoides DSM 17374 10494863 YP_004411184.1 CDS Spico_0574 NC_015436.1 659988 660422 R COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: dsy:DSY4193 hypothetical protein; PFAM: Transcription regulator Rrf2; SPTR: uncharacterized protein; TIGRFAM: Transcription regulator Rrf2; IMG reference gene:2503956853; PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; AsnC family transcriptional regulator complement(659988..660422) Sphaerochaeta coccoides DSM 17374 10494864 YP_004411185.1 CDS Spico_0575 NC_015436.1 660419 660859 R COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: cce:Ccel_1933 transcriptional regulator, BadM/Rrf2 family; PFAM: Transcription regulator Rrf2; SPTR: Transcriptional regulator, BadM/Rrf2 family; TIGRFAM: Transcription regulator Rrf2; IMG reference gene:2503956854; PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; AsnC family transcriptional regulator complement(660419..660859) Sphaerochaeta coccoides DSM 17374 10494865 YP_004411186.1 CDS Spico_0576 NC_015436.1 661001 661807 D COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198; KEGG: cak:Caul_2944 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Oxidoreductase, short chain dehydrogenase/reductase; IMG reference gene:2503956855; PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 661001..661807 Sphaerochaeta coccoides DSM 17374 10494866 YP_004411187.1 CDS Spico_0577 NC_015436.1 661808 663046 R COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: ssm:Spirs_2778 integrase; PFAM: Integrase, catalytic core, phage; SPTR: Lj965 prophage integrase; IMG reference gene:2503956856; PFAM: Phage integrase; integrase complement(661808..663046) Sphaerochaeta coccoides DSM 17374 10494867 YP_004411188.1 CDS Spico_0578 NC_015436.1 663626 664099 R COGs: COG0691 tmRNA-binding protein; HAMAP: SsrA-binding protein; InterPro IPR000037; KEGG: ssm:Spirs_2009 SsrA-binding protein; PFAM: SsrA-binding protein; SPTR: SsrA-binding protein; TIGRFAM: SsrA-binding protein; IMG reference gene:2503956857; PFAM: SmpB protein; TIGRFAM: SsrA-binding protein; SsrA-binding protein complement(663626..664099) Sphaerochaeta coccoides DSM 17374 10494868 YP_004411189.1 CDS Spico_0579 NC_015436.1 664104 665561 R COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: ssm:Spirs_2010 protein of unknown function DUF323; PFAM: Sulphatase-modifying factor; SPTR: uncharacterized protein; IMG reference gene:2503956858; PFAM: Formylglycine-generating sulfatase enzyme; sulfatase-modifying factor protein complement(664104..665561) Sphaerochaeta coccoides DSM 17374 10494869 YP_004411190.1 CDS Spico_0580 NC_015436.1 665628 666635 D InterPro IPR019759:IPR000223; KEGG: ssm:Spirs_2011 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: Signal peptidase I; TIGRFAM: Peptidase S26A, signal peptidase I; IMG reference gene:2503956859; PFAM: Peptidase S26; TIGRFAM: signal peptidase I, bacterial type; signal peptidase I 665628..666635 Sphaerochaeta coccoides DSM 17374 10494870 YP_004411191.1 CDS Spico_0581 NC_015436.1 666632 667834 D COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterPro IPR007197:IPR010723:IPR004559:IPR006638; KEGG: dba:Dbac_3351 oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN, C-terminal; Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; IMG reference gene:2503956860; PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; oxygen-independent coproporphyrinogen III oxidase 666632..667834 Sphaerochaeta coccoides DSM 17374 10494871 YP_004411192.1 CDS Spico_0582 NC_015436.1 667930 668673 D COGs: COG0217 conserved hypothetical protein; HAMAP: Protein of unknown function DUF28; InterPro IPR002876; KEGG: ssm:Spirs_2014 protein of unknown function DUF28; PFAM: Protein of unknown function DUF28; SPTR: uncharacterized protein; TIGRFAM: Protein of unknown function DUF28; IMG reference gene:2503956861; PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family; hypothetical protein 667930..668673 Sphaerochaeta coccoides DSM 17374 10494872 YP_004411193.1 CDS Spico_0583 NC_015436.1 668612 669166 D COGs: COG0817 Holliday junction resolvasome endonuclease subunit; HAMAP: Crossover junction endodeoxyribonuclease RuvC; InterPro IPR002176; KEGG: ssm:Spirs_2015 crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC; PRIAM: Crossover junction endodeoxyribonuclease; SPTR: Crossover junction endodeoxyribonuclease ruvC; TIGRFAM: Crossover junction endodeoxyribonuclease RuvC; IMG reference gene:2503956862; PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; Crossover junction endodeoxyribonuclease ruvC 668612..669166 Sphaerochaeta coccoides DSM 17374 10494873 YP_004411194.1 CDS Spico_0584 NC_015436.1 669254 669883 D COGs: COG0632 Holliday junction resolvasome DNA-binding subunit; HAMAP: Bacterial DNA recombination protein RuvA; InterPro IPR000085:IPR013849:IPR003583; KEGG: tpp:TPASS_0543 Holliday junction DNA helicase, subunit A; PFAM: DNA helicase, Holliday junction RuvA type, domain I, bacterial; SPTR: Holliday junction ATP-dependent DNA helicase ruvA; TIGRFAM: Bacterial DNA recombination protein RuvA; IMG reference gene:2503956863; PFAM: RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit; Holliday junction DNA helicase subunit RuvA 669254..669883 Sphaerochaeta coccoides DSM 17374 10494874 YP_004411195.1 CDS Spico_0585 NC_015436.1 669889 670959 D COGs: COG2255 Holliday junction resolvasome helicase subunit; HAMAP: DNA helicase, Holliday junction RuvB type; InterProIPR004605:IPR008824:IPR003959:IPR008823:IPR 003593; KEGG: ssm:Spirs_2017 Holliday junction DNA helicase RuvB; PFAM: DNA helicase, Holliday junction RuvB type, C-terminal; ATPase, AAA-type, core; DNA helicase, Holliday junction RuvB type, N-terminal; SMART: ATPase, AAA+ type, core; SPTR: Holliday junction ATP-dependent DNA helicase ruvB; TIGRFAM: DNA helicase, Holliday junction RuvB type; IMG reference gene:2503956864; PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit; Holliday junction DNA helicase subunit RuvB 669889..670959 Sphaerochaeta coccoides DSM 17374 10494875 YP_004411196.1 CDS Spico_0586 NC_015436.1 670934 671974 D COGs: COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); HAMAP: Queuosine biosynthesis protein; InterPro IPR003699; KEGG: ssm:Spirs_2018 S-adenosylmethionine/tRNA-ribosyltransferase-iso merase; PFAM: Queuosine biosynthesis protein; SPTR: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM: Queuosine biosynthesis protein; IMG reference gene:2503956865; PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 670934..671974 Sphaerochaeta coccoides DSM 17374 10494876 YP_004411197.1 CDS Spico_0587 NC_015436.1 672002 672649 R COGs: COG0125 Thymidylate kinase; HAMAP: Thymidylate kinase; InterPro IPR018094; KEGG: tpp:TPASS_0354 thymidylate kinase; PFAM: Thymidylate kinase; PRIAM: dTMP kinase; SPTR: Thymidylate kinase; TIGRFAM: Thymidylate kinase; IMG reference gene:2503956866; PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase; thymidylate kinase complement(672002..672649) Sphaerochaeta coccoides DSM 17374 10494877 YP_004411198.1 CDS Spico_0588 NC_015436.1 672899 677851 D InterPro IPR007452; KEGG: ssm:Spirs_2021 protein of unknown function DUF490; PFAM: Protein of unknown function DUF490; SPTR: uncharacterized protein; IMG reference gene:2503956867; PFAM: Family of unknown function (DUF490); hypothetical protein 672899..677851 Sphaerochaeta coccoides DSM 17374 10494878 YP_004411199.1 CDS Spico_0589 NC_015436.1 677872 680397 D COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827:IPR000184:IPR016474; KEGG: ssm:Spirs_2022 outer membrane protein assembly complex, YaeT protein; PFAM: Bacterial surface antigen (D15); Surface antigen variable number; SPTR: surface antigen; TIGRFAM: Outer membrane assembly protein, YaeT; IMG reference gene:2503956868; PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein; outer membrane protein assembly complex, YaeT protein 677872..680397 Sphaerochaeta coccoides DSM 17374 10494879 YP_004411200.1 CDS Spico_0590 NC_015436.1 680475 683129 D COGs: COG0249 Mismatch repair ATPase (MutS family); HAMAP: DNA mismatch repair protein MutS, type 1; InterProIPR005748:IPR007695:IPR007860:IPR007696:IPR 007861:IPR000432; KEGG: ssm:Spirs_2024 DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS-like, N-terminal; DNA mismatch repair protein MutS, connector; DNA mismatch repair protein MutS, core; DNA mismatch repair protein MutS, clamp; SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; SPTR: DNA mismatch repair protein MutS; TIGRFAM: DNA mismatch repair protein MutS, type 1; IMG reference gene:2503956869; PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS; DNA mismatch repair protein mutS 680475..683129 Sphaerochaeta coccoides DSM 17374 10494880 YP_004411201.1 CDS Spico_0591 NC_015436.1 683150 683866 D COGs: COG1040 amidophosphoribosyltransferase; KEGG: ele:Elen_1211 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956870; hypothetical protein 683150..683866 Sphaerochaeta coccoides DSM 17374 10494881 YP_004411202.1 CDS Spico_0592 NC_015436.1 684025 684525 D HAMAP: Ribosome maturation factor RimP; InterPro IPR003728; KEGG: sta:STHERM_c11200 hypothetical protein; PFAM: Ribosome maturation factor RimP; SPTR: uncharacterized protein; IMG reference gene:2503956871; PFAM: Uncharacterised BCR, YhbC family COG0779; Ribosome maturation factor rimP 684025..684525 Sphaerochaeta coccoides DSM 17374 10494882 YP_004411203.1 CDS Spico_0593 NC_015436.1 684515 685948 D COGs: COG0195 Transcription elongation factor; InterProIPR013735:IPR003029:IPR010213:IPR022967:IPR 004087; KEGG: ssm:Spirs_2027 transcription termination factor NusA; PFAM: Transcription factor NusA, N-terminal; Ribosomal protein S1, RNA-binding domain; SMART: RNA-binding domain, S1; K Homology; SPTR: uncharacterized protein; TIGRFAM: Transcription termination factor NusA; IMG reference gene:2503956872; PFAM: NusA N-terminal domain; S1 RNA binding domain; Mitochondrial ribosomal protein MRP-S35; TIGRFAM: transcription termination factor NusA; NusA antitermination factor 684515..685948 Sphaerochaeta coccoides DSM 17374 10494883 YP_004411204.1 CDS Spico_0594 NC_015436.1 685992 688937 D COGs: COG0532 Translation initiation factor 2 (IF-2; GTPase); InterProIPR006847:IPR000795:IPR004161:IPR000178:IPR 005225; KEGG: ssm:Spirs_2028 translation initiation factor IF-2; PFAM: Protein synthesis factor, GTP-binding; Translation initiation factor IF-2, N-terminal; Translation elongation factor EFTu/EF1A, domain 2; SPTR: Translation initiation factor IF-2; TIGRFAM: Translation initiation factor aIF-2, bacterial-like; Small GTP-binding protein; IMG reference gene:2503956873; PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2; translation initiation factor 2 (bIF-2) 685992..688937 Sphaerochaeta coccoides DSM 17374 10494884 YP_004411205.1 CDS Spico_0595 NC_015436.1 688947 689321 D COGs: COG0858 Ribosome-binding factor A; HAMAP: Ribosome-binding factor A; InterPro IPR000238; KEGG: ssm:Spirs_2029 ribosome-binding factor A; PFAM: Ribosome-binding factor A; SPTR: Ribosome-binding factor A; TIGRFAM: Ribosome-binding factor A; IMG reference gene:2503956874; PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; Ribosome-binding factor A 688947..689321 Sphaerochaeta coccoides DSM 17374 10494885 YP_004411206.1 CDS Spico_0596 NC_015436.1 689311 690186 D COGs: COG0130 Pseudouridine synthase; HAMAP: tRNA pseudouridine synthase II, TruB; InterPro IPR014780:IPR002501; KEGG: sta:STHERM_c11160 tRNA pseudouridine 55 synthase; PFAM: Pseudouridine synthase II; SPTR: tRNA pseudouridine 55 synthase; TIGRFAM: tRNA pseudouridine synthase II, TruB; IMG reference gene:2503956875; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase; tRNA pseudouridine synthase B 689311..690186 Sphaerochaeta coccoides DSM 17374 10494886 YP_004411207.1 CDS Spico_0597 NC_015436.1 690221 691117 D COGs: COG0196 FAD synthase; InterPro IPR015864; KEGG: sta:STHERM_c11150 riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; SPTR: Riboflavin biosynthesis protein RibF; IMG reference gene:2503956876; PFAM: FAD synthetase; FAD synthetase 690221..691117 Sphaerochaeta coccoides DSM 17374 10494887 YP_004411208.1 CDS Spico_0598 NC_015436.1 691117 691383 D COGs: COG0184 Ribosomal protein S15P/S13E; InterPro IPR000589:IPR005290; KEGG: ssm:Spirs_2032 ribosomal protein S15; PFAM: Ribosomal protein S15; SPTR: 30S ribosomal protein S15; TIGRFAM: Ribosomal protein S15, bacterial-type; IMG reference gene:2503956877; PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle; 30S ribosomal protein S15 691117..691383 Sphaerochaeta coccoides DSM 17374 10494888 YP_004411209.1 CDS Spico_0599 NC_015436.1 691522 693639 D COGs: COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); HAMAP: Polyribonucleotide nucleotidyltransferase; InterProIPR012162:IPR001247:IPR015847:IPR015848:IPR 018111:IPR003029:IPR004087:IPR022967; KEGG: ssm:Spirs_2033 polyribonucleotide nucleotidyltransferase; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; K Homology, type 1, subgroup; Ribosomal protein S1, RNA-binding domain; PRIAM: Polyribonucleotide nucleotidyltransferase; SMART: RNA-binding domain, S1; K Homology; SPTR: Polyribonucleotide nucleotidyltransferase; TIGRFAM: Polyribonucleotide nucleotidyltransferase; IMG reference gene:2503956878; PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease, domain 1; 3' exoribonuclease, domain 2; Polyribonucleotide nucleotidyltransferase, RNA binding domain; TIGRFAM: polyribonucleotide nucleotidyltransferase; polyribonucleotide nucleotidyltransferase 691522..693639 Sphaerochaeta coccoides DSM 17374 10494889 YP_004411210.1 CDS Spico_0600 NC_015436.1 693639 694085 D COGs: COG0756 dUTPase; HAMAP: DeoxyUTP pyrophosphatase; InterPro IPR008181:IPR008180; KEGG: rpc:RPC_0381 deoxyuridine 5'-triphosphate nucleotidohydrolase; PFAM: DeoxyUTP pyrophosphatase domain; PRIAM: dUTP diphosphatase; SPTR: Deoxyuridine 5'-triphosphate nucleotidohydrolase; TIGRFAM: DeoxyUTP pyrophosphatase; IMG reference gene:2503956879; PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut); deoxyuridine 5'-triphosphate nucleotidohydrolase 693639..694085 Sphaerochaeta coccoides DSM 17374 10494890 YP_004411211.1 CDS Spico_0601 NC_015436.1 694096 695379 D COGs: COG0795 permease; InterPro IPR005495; KEGG: sta:STHERM_c11120 hypothetical protein; PFAM: Permease YjgP/YjgQ, predicted; SPTR: uncharacterized protein; IMG reference gene:2503956880; PFAM: Predicted permease YjgP/YjgQ family; YjgP/YjgQ family permease 694096..695379 Sphaerochaeta coccoides DSM 17374 10494891 YP_004411212.1 CDS Spico_0602 NC_015436.1 695376 696467 D COGs: COG0795 permease; InterPro IPR005495; KEGG: sta:STHERM_c11110 permease YjgP/YjgQ family protein; PFAM: Permease YjgP/YjgQ, predicted; SPTR: Permease YjgP/YjgQ family protein; IMG reference gene:2503956881; PFAM: Predicted permease YjgP/YjgQ family; YjgP/YjgQ family permease 695376..696467 Sphaerochaeta coccoides DSM 17374 10494892 YP_004411213.1 CDS Spico_0603 NC_015436.1 696487 697626 D COGs: COG0343 Queuine/archaeosine tRNA-ribosyltransferase; HAMAP: Queuine tRNA-ribosyltransferase; InterPro IPR004803:IPR002616; KEGG: ssm:Spirs_2037 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; PRIAM: tRNA-guanine transglycosylase; SPTR: Queuine tRNA-ribosyltransferase; TIGRFAM: Queuine tRNA-ribosyltransferase; Queuine/other tRNA-ribosyltransferase; IMG reference gene:2503956882; PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming; tRNA-guanine transglycosylase 696487..697626 Sphaerochaeta coccoides DSM 17374 10494893 YP_004411214.1 CDS Spico_0604 NC_015436.1 697619 699181 D COGs: COG0728 membrane protein virulence factor; InterPro IPR004268; KEGG: sta:STHERM_c11090 virulence factor MviN; PFAM: Flagellin assembly, membrane protein MviN; SPTR: Virulence factor MviN; TIGRFAM: Flagellin assembly, membrane protein MviN; IMG reference gene:2503956883; PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN; integral membrane protein MviN 697619..699181 Sphaerochaeta coccoides DSM 17374 10494894 YP_004411215.1 CDS Spico_0605 NC_015436.1 699271 701964 R COGs: COG1747 Uncharacterized N-terminal domain of the transcription elongation factor GreA; InterPro IPR022691:IPR001437; KEGG: ssm:Spirs_2041 transcription elongation factor GreA; PFAM: Transcription elongation factor, GreA/GreB, N-terminal; Transcription elongation factor, GreA/GreB, C-terminal; SPTR: uncharacterized protein; IMG reference gene:2503956884; PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA; Transcription elongation factor, GreA/GreB, N-terminal protein complement(699271..701964) Sphaerochaeta coccoides DSM 17374 10494895 YP_004411216.1 CDS Spico_0606 NC_015436.1 702299 702973 D COGs: COG0036 Pentose-5-phosphate-3-epimerase; InterPro IPR000056; KEGG: tde:TDE2597 ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3-epimerase; PRIAM: Ribulose-phosphate 3-epimerase; SPTR: Ribulose-phosphate 3-epimerase; TIGRFAM: Ribulose-phosphate 3-epimerase; IMG reference gene:2503956885; PFAM: Ribulose-phosphate 3 epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; ribulose-5-phosphate 3-epimerase 702299..702973 Sphaerochaeta coccoides DSM 17374 10494896 YP_004411217.1 CDS Spico_0607 NC_015436.1 702970 703443 D COGs: COG1490 D-Tyr-tRNAtyr deacylase; HAMAP: D-tyrosyl-tRNA(Tyr) deacylase; InterPro IPR003732; KEGG: trq:TRQ2_0197 D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase; SPTR: D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; IMG reference gene:2503956886; PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; D-tyrosyl-tRNA(Tyr) deacylase 702970..703443 Sphaerochaeta coccoides DSM 17374 10494897 YP_004411218.1 CDS Spico_0608 NC_015436.1 703499 704560 D COGs: COG0468 RecA/RadA recombinase; HAMAP: DNA recombination and repair protein RecA; InterPro IPR013765:IPR003593; KEGG: tde:TDE0872 recombinase A; PFAM: DNA recombination and repair protein RecA; SMART: ATPase, AAA+ type, core; SPTR: Protein recA; TIGRFAM: DNA recombination and repair protein RecA; IMG reference gene:2503956887; PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA; recombinase A 703499..704560 Sphaerochaeta coccoides DSM 17374 10494898 YP_004411219.1 CDS Spico_0609 NC_015436.1 704637 705545 D COGs: COG1354 conserved hypothetical protein; InterPro IPR003768; KEGG: ssm:Spirs_2052 chromosome segregation and condensation protein ScpA; PFAM: Prokaryotic chromosome segregation/condensation protein ScpA; SPTR: uncharacterized protein; IMG reference gene:2503956888; PFAM: ScpA/B protein; chromosome segregation and condensation protein ScpA 704637..705545 Sphaerochaeta coccoides DSM 17374 10494899 YP_004411220.1 CDS Spico_0610 NC_015436.1 705557 706261 D COGs: COG1386 transcriptional regulator protein containing the HTH domain; InterPro IPR005234; KEGG: ssm:Spirs_2053 chromosome segregation and condensation protein, ScpB; PFAM: Chromosome segregation/condensation protein ScpB, prokaryote; SPTR: Transcriptional regulator, ; TIGRFAM: Chromosome segregation/condensation protein ScpB, prokaryote; IMG reference gene:2503956889; PFAM: transcriptional regulators (Ypuh-like); TIGRFAM: segregation and condensation protein B; chromosome segregation and condensation protein ScpB 705557..706261 Sphaerochaeta coccoides DSM 17374 10494900 YP_004411221.1 CDS Spico_0611 NC_015436.1 706251 706997 D COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterPro IPR002942:IPR006145:IPR000748; KEGG: ssm:Spirs_2054 RNA-binding S4 domain protein; PFAM: RNA-binding S4; Pseudouridine synthase, RsuA and RluB/C/D/E/F; SMART: RNA-binding S4; SPTR: Pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RsuA/RluB/E/F; IMG reference gene:2503956890; PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; pseudouridine synthase 706251..706997 Sphaerochaeta coccoides DSM 17374 10494901 YP_004411222.1 CDS Spico_0612 NC_015436.1 706997 707650 D COGs: COG0283 Cytidylate kinase; HAMAP: Cytidylate kinase; InterPro IPR003136:IPR011994; KEGG: ssm:Spirs_2055 cytidylate kinase; PFAM: Cytidylate kinase domain; SPTR: Cytidylate kinase; TIGRFAM: Cytidylate kinase; IMG reference gene:2503956891; PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase; cytidylate kinase 706997..707650 Sphaerochaeta coccoides DSM 17374 10494902 YP_004411223.1 CDS Spico_0613 NC_015436.1 707678 709393 D COGs: COG0539 Ribosomal protein S1; InterPro IPR003029:IPR022967; KEGG: ssm:Spirs_2056 ribosomal protein S1; PFAM: Ribosomal protein S1, RNA-binding domain; SMART: RNA-binding domain, S1; SPTR: Cytidylate kinase/ribosomal protein S1; IMG reference gene:2503956892; PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1; RNA binding S1 domain-containing protein 707678..709393 Sphaerochaeta coccoides DSM 17374 10494903 YP_004411224.1 CDS Spico_0614 NC_015436.1 709408 710097 D InterPro IPR013105; KEGG: sta:STHERM_c10950 hypothetical protein; PFAM: Tetratricopeptide TPR2; SPTR: uncharacterized protein; IMG reference gene:2503956893; hypothetical protein 709408..710097 Sphaerochaeta coccoides DSM 17374 10494904 YP_004411225.1 CDS Spico_0615 NC_015436.1 710117 710968 D KEGG: tgu:100222319 similar to von Willebrand factor; SPTR: ATP-dependent zinc metalloprotease FtsH homolog; IMG reference gene:2503956894; hypothetical protein 710117..710968 Sphaerochaeta coccoides DSM 17374 10494905 YP_004411226.1 CDS Spico_0616 NC_015436.1 711173 712012 D COGs: COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain; InterPro IPR004518:IPR011551; KEGG: ssm:Spirs_2069 MazG family protein; PFAM: NTP pyrophosphohydrolase MazG, catalytic core; SPTR: uncharacterized protein; TIGRFAM: NTP pyrophosphohydrolase MazG, bacterial; IMG reference gene:2503956895; PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein; nucleotide pyrophosphohydrolase 711173..712012 Sphaerochaeta coccoides DSM 17374 10494906 YP_004411227.1 CDS Spico_0617 NC_015436.1 712417 713229 R COGs: COG1579 Zn-ribbon protein possibly nucleic acid-binding; InterPro IPR003743; KEGG: ssm:Spirs_2077 protein of unknown function DUF164; PFAM: Protein of unknown function DUF164; SPTR: nucleic acid-binding Zn-ribbon protein; IMG reference gene:2503956897; PFAM: zinc ribbon domain; hypothetical protein complement(712417..713229) Sphaerochaeta coccoides DSM 17374 10494908 YP_004411228.1 CDS Spico_0618 NC_015436.1 713359 715416 R COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR009042:IPR007627:IPR007624:IPR007630:IPR 014284:IPR012760; KEGG: ssm:Spirs_2078 RNA polymerase, sigma 70 subunit, RpoD subfamily; PFAM: RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 4; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor RpoD, C-terminal; RNA polymerase sigma-70; IMG reference gene:2503956898; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain; RNA polymerase sigma-70 subunit RpoD complement(713359..715416) Sphaerochaeta coccoides DSM 17374 10494909 YP_004411229.1 CDS Spico_0619 NC_015436.1 715492 717300 R COGs: COG0358 DNA primase; InterPro IPR002694:IPR013264:IPR006171:IPR006295; KEGG: ssm:Spirs_2079 DNA primase; PFAM: DNA primase, catalytic core, N-terminal; Zinc finger, CHC2-type; Toprim domain; SPTR: DNA primase; TIGRFAM: DNA primase, DnaG; IMG reference gene:2503956899; PFAM: Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; DnaB-helicase binding domain of primase; TIGRFAM: DNA primase, catalytic core; DNA primase complement(715492..717300) Sphaerochaeta coccoides DSM 17374 10494910 YP_004411230.1 CDS Spico_0620 NC_015436.1 717326 717772 R InterPro IPR005358; KEGG: sta:STHERM_c10760 hypothetical protein; PFAM: Uncharacterised protein family UPF0153; SPTR: uncharacterized protein; IMG reference gene:2503956900; PFAM: Uncharacterised protein family (UPF0153); hypothetical protein complement(717326..717772) Sphaerochaeta coccoides DSM 17374 10494911 YP_004411231.1 CDS Spico_0621 NC_015436.1 718151 719386 D COGs: COG2309 Leucyl aminopeptidase (aminopeptidase T); InterPro IPR000787; KEGG: lsp:Bsph_0293 aminopeptidase AmpS; PFAM: Peptidase M29, aminopeptidase II; SPTR: Aminopeptidase ampS; IMG reference gene:2503956902; PFAM: Thermophilic metalloprotease (M29); peptidase M29 aminopeptidase II 718151..719386 Sphaerochaeta coccoides DSM 17374 10494913 YP_004411232.1 CDS Spico_0622 NC_015436.1 719389 720615 D COGs: COG2309 Leucyl aminopeptidase (aminopeptidase T); InterPro IPR000787; KEGG: baf:BAPKO_0070 aminopeptidase II; PFAM: Peptidase M29, aminopeptidase II; SPTR: Aminopeptidase II; IMG reference gene:2503956903; PFAM: Thermophilic metalloprotease (M29); peptidase M29 aminopeptidase II 719389..720615 Sphaerochaeta coccoides DSM 17374 10494914 YP_004411233.1 CDS Spico_0623 NC_015436.1 720635 721408 R COGs: COG1521 transcriptional regulator protein; HAMAP: Type III pantothenate kinase; InterPro IPR004619; KEGG: afn:Acfer_1593 transcriptional activator, Baf family; PFAM: Type III pantothenate kinase; PRIAM: Pantothenate kinase; SPTR: Type III pantothenate kinase; TIGRFAM: Type III pantothenate kinase; IMG reference gene:2503956904; PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III; Baf family transcriptional acitvator complement(720635..721408) Sphaerochaeta coccoides DSM 17374 10494915 YP_004411234.1 CDS Spico_0624 NC_015436.1 721419 723056 R COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003439:IPR003593; KEGG: ssm:Spirs_1718 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; IMG reference gene:2503956905; PFAM: ABC transporter; ABC transporter complement(721419..723056) Sphaerochaeta coccoides DSM 17374 10494916 YP_004411235.1 CDS Spico_0625 NC_015436.1 723381 723911 R COGs: COG0503 Adenine/guanine phosphoribosyltransferase and related PRPP-binding protein; HAMAP: Adenine phosphoribosyl transferase; InterPro IPR000836:IPR005764; KEGG: tde:TDE1684 adenine phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; SPTR: Adenine phosphoribosyltransferase; TIGRFAM: Adenine phosphoribosyl transferase; IMG reference gene:2503956908; PFAM: Phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase; adenine phosphoribosyltransferase complement(723381..723911) Sphaerochaeta coccoides DSM 17374 10494919 YP_004411236.1 CDS Spico_0626 NC_015436.1 723938 724951 R COGs: COG0533 Metal-dependent protease with possible chaperone activity; HAMAP: Peptidase M22, O-sialoglycoprotein peptidase; InterPro IPR000905:IPR022450:IPR017861; KEGG: ssm:Spirs_1796 metalloendopeptidase, glycoprotease; PFAM: Peptidase M22, glycoprotease; PRIAM: O-sialoglycoprotein endopeptidase; SPTR: Probable O-sialoglycoprotein endopeptidase; TIGRFAM: Peptidase M22, O-sialoglycoprotein peptidase; Peptidase M22, glycoprotease, subgroup; IMG reference gene:2503956909; PFAM: Glycoprotease; TIGRFAM: glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family; O-sialoglycoprotein endopeptidase complement(723938..724951) Sphaerochaeta coccoides DSM 17374 10494920 YP_004411237.1 CDS Spico_0627 NC_015436.1 724974 725225 R IMG reference gene:2503956910; hypothetical protein complement(724974..725225) Sphaerochaeta coccoides DSM 17374 10494921 YP_004411238.1 CDS Spico_0628 NC_015436.1 725658 728366 R COGs: COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; InterPro IPR002192:IPR008279:IPR000121:IPR010121; KEGG: rmr:Rmar_0942 pyruvate, phosphate dikinase; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme; PRIAM: Pyruvate, phosphate dikinase; SPTR: Pyruvate, phosphate dikinase; TIGRFAM: Pyruvate, phosphate dikinase; IMG reference gene:2503956912; PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: pyruvate, phosphate dikinase; pyruvate phosphate dikinase complement(725658..728366) Sphaerochaeta coccoides DSM 17374 10494923 YP_004411239.1 CDS Spico_0629 NC_015436.1 728660 729541 R COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR009042:IPR007627:IPR007624:IPR007630:IPR 014284; KEGG: ssm:Spirs_1715 RNA polymerase, sigma 70 subunit, RpoD subfamily; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 3; SPTR: RNA polymerase sigma-70 factor family protein; TIGRFAM: RNA polymerase sigma-70; IMG reference gene:2503956913; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RpoD subfamily RNA polymerase sigma-70 subunit complement(728660..729541) Sphaerochaeta coccoides DSM 17374 10494924 YP_004411240.1 CDS Spico_0630 NC_015436.1 729818 730516 R KEGG: ncr:NCU05178 hypothetical protein; SPTR: 3-deoxy-D-manno-octulosonic-acid transferase; IMG reference gene:2503956914; hypothetical protein complement(729818..730516) Sphaerochaeta coccoides DSM 17374 10494925 YP_004411241.1 CDS Spico_0631 NC_015436.1 730534 730800 D COGs: COG0234 Co-chaperonin GroES (HSP10); HAMAP: Chaperonin Cpn10; InterPro IPR020818; KEGG: sta:STHERM_c05480 hypothetical protein; PFAM: Chaperonin Cpn10; SMART: Chaperonin Cpn10; SPTR: uncharacterized protein; IMG reference gene:2503956915; PFAM: Chaperonin 10 Kd subunit; molecular chaperone GroES 730534..730800 Sphaerochaeta coccoides DSM 17374 10494926 YP_004411242.1 CDS Spico_0632 NC_015436.1 730914 733019 R COGs: COG1199 Rad3-related DNA helicase; InterPro IPR006555; KEGG: ssm:Spirs_1712 helicase C2; SMART: Helicase, ATP-dependent, c2 type; SPTR: uncharacterized protein; IMG reference gene:2503956916; helicase c2 complement(730914..733019) Sphaerochaeta coccoides DSM 17374 10494927 YP_004411243.1 CDS Spico_0633 NC_015436.1 733006 734367 R COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR002078:IPR002197:IPR003593; KEGG: ssm:Spirs_1709 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver domain; ATPase, AAA+ type, core; SPTR: Transcriptional regulatory protein; IMG reference gene:2503956917; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; Fis family transcriptional regulator complement(733006..734367) Sphaerochaeta coccoides DSM 17374 10494928 YP_004411244.1 CDS Spico_0634 NC_015436.1 734342 735598 R COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: ssm:Spirs_1708 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: sensory transduction histidine kinase; IMG reference gene:2503956918; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; histidine kinase complement(734342..735598) Sphaerochaeta coccoides DSM 17374 10494929 YP_004411245.1 CDS Spico_0635 NC_015436.1 735591 736778 R COGs: COG2812 DNA polymerase III gamma/tau subunits; KEGG: ssm:Spirs_1707 DNA polymerase III gamma/tau subunits; SPTR: DNA polymerase III domain protein; IMG reference gene:2503956919; hypothetical protein complement(735591..736778) Sphaerochaeta coccoides DSM 17374 10494930 YP_004411246.1 CDS Spico_0636 NC_015436.1 736802 736960 R KEGG: ppy:PPE_00816 adenine specific DNA methylase Mod; SPTR: uncharacterized protein; IMG reference gene:2503956920; adenine-specific DNA methylase complement(736802..736960) Sphaerochaeta coccoides DSM 17374 10494931 YP_004411247.1 CDS Spico_0637 NC_015436.1 736970 737461 R InterPro IPR003825; KEGG: tde:TDE1973 CvpA family protein; PFAM: Colicin V production, CvpA; SPTR: CvpA family protein; IMG reference gene:2503956921; PFAM: Colicin V production protein; colicin V production protein complement(736970..737461) Sphaerochaeta coccoides DSM 17374 10494932 YP_004411248.1 CDS Spico_0638 NC_015436.1 737464 738576 R COGs: COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; HAMAP: N-acetylglucosaminyltransferase, MurG; InterPro IPR004276:IPR007235:IPR006009; KEGG: sta:STHERM_c05390 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide)pyrophosphory l-undecaprenol N-acetylglucosamine transferase; PFAM: Glycosyl transferase, family 28; Glycosyl transferase, family 28, C-terminal; PRIAM: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; SPTR: UDP-N-acetylglucosamine--N-acetylmuramyl- (Pentapeptide)pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; TIGRFAM: N-acetylglucosaminyltransferase, MurG; IMG reference gene:2503956922; PFAM: Glycosyltransferase 28 N-terminal domain; Glycosyltransferase 28 C-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase complement(737464..738576) Sphaerochaeta coccoides DSM 17374 10494933 YP_004411249.1 CDS Spico_0639 NC_015436.1 738748 741516 D COGs: COG0653 Preprotein translocase subunit SecA (ATPase RNA helicase); HAMAP: SecA protein; InterProIPR011115:IPR011130:IPR011116:IPR004027:IPR 000185; KEGG: ssm:Spirs_2625 preprotein translocase, SecA subunit; PFAM: SecA DEAD-like, N-terminal; SecA preprotein, cross-linking domain; SecA Wing/Scaffold; SEC-C motif; SMART: SecA DEAD-like, N-terminal; SecA preprotein, cross-linking domain; SPTR: Protein translocase subunit SecA; TIGRFAM: SecA protein; IMG reference gene:2503956923; PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SEC-C motif; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit; protein translocase subunit secA 738748..741516 Sphaerochaeta coccoides DSM 17374 10494934 YP_004411250.1 CDS Spico_0640 NC_015436.1 741667 742803 R COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR018392:IPR016047:IPR002482; KEGG: bpo:BP951000_1905 LysM domain/M23/M37 peptidase domain-containing protein; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: LysM domain/M23/M37 peptidase domain protein; IMG reference gene:2503956924; PFAM: Peptidase M23; LysM domain; peptidase M23 complement(741667..742803) Sphaerochaeta coccoides DSM 17374 10494935 YP_004411251.1 CDS Spico_0641 NC_015436.1 742849 744528 D COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR001460; KEGG: ssm:Spirs_2628 peptidoglycan glycosyltransferase; PFAM: Penicillin-binding protein, transpeptidase; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Penicillin-binding protein; IMG reference gene:2503956925; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; peptidoglycan glycosyltransferase 742849..744528 Sphaerochaeta coccoides DSM 17374 10494936 YP_004411252.1 CDS Spico_0642 NC_015436.1 744520 745710 R COGs: COG1419 Flagellar GTP-binding protein; InterPro IPR000897:IPR003593; KEGG: ssm:Spirs_1583 flagellar biosynthetic protein FlhF; PFAM: Signal recognition particle, SRP54 subunit, GTPase; SMART: Signal recognition particle, SRP54 subunit, GTPase; ATPase, AAA+ type, core; SPTR: Flagellar-associated GTP-binding protein; IMG reference gene:2503956926; PFAM: SRP54-type protein, GTPase domain; GTP-binding signal recognition particle SRP54 G- domain-containing protein complement(744520..745710) Sphaerochaeta coccoides DSM 17374 10494937 YP_004411253.1 CDS Spico_0643 NC_015436.1 745742 747148 R COGs: COG1220 ATP-dependent protease HslVU (ClpYQ) ATPase subunit; InterPro IPR013093:IPR003593:IPR004491; KEGG: tde:TDE1211 ATP-dependent protease ATP-binding subunit HslU; PFAM: ATPase, AAA-2; SMART: ATPase, AAA+ type, core; SPTR: ATP-dependent protease ATPase subunit HslU; TIGRFAM: Heat shock protein HslU; IMG reference gene:2503956927; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; AAA domain (dynein-related subfamily); TIGRFAM: ATP-dependent protease HslVU, ATPase subunit; heat shock protein HslVU, ATPase subunit HslU complement(745742..747148) Sphaerochaeta coccoides DSM 17374 10494938 YP_004411254.1 CDS Spico_0644 NC_015436.1 747152 747685 R COGs: COG5405 ATP-dependent protease HslVU (ClpYQ) peptidase subunit; HAMAP: ATP-dependent protease, HslV subunit; InterPro IPR001353:IPR022281; KEGG: sta:STHERM_c09050 ATP-dependent protease HslV; PFAM: Proteasome, subunit alpha/beta; SPTR: ATP-dependent protease HslV; TIGRFAM: ATP-dependent protease, HslV subunit; IMG reference gene:2503956928; PFAM: Proteasome subunit; TIGRFAM: ATP-dependent protease HslVU, peptidase subunit; ATP-dependent protease hslV complement(747152..747685) Sphaerochaeta coccoides DSM 17374 10494939 YP_004411255.1 CDS Spico_0645 NC_015436.1 747682 748614 R COGs: COG4974 Site-specific recombinase XerD; HAMAP: Tyrosine recombinase xerC; InterPro IPR004107:IPR002104; KEGG: toc:Toce_1087 tyrosine recombinase XerC; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; SPTR: Tyrosine recombinase XerC; IMG reference gene:2503956929; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase; tyrosine recombinase XerC complement(747682..748614) Sphaerochaeta coccoides DSM 17374 10494940 YP_004411256.1 CDS Spico_0646 NC_015436.1 748621 749451 R COGs: COG0758 Rossmann fold nucleotide-binding protein involved in DNA uptake; KEGG: sta:STHERM_c09020 DNA processing protein DprA; SPTR: Smf protein; IMG reference gene:2503956930; PFAM: DNA recombination-mediator protein A; hypothetical protein complement(748621..749451) Sphaerochaeta coccoides DSM 17374 10494941 YP_004411257.1 CDS Spico_0647 NC_015436.1 749678 750607 R COGs: COG4974 Site-specific recombinase XerD; HAMAP: Tyrosine recombinase xerC; InterPro IPR004107:IPR002104; KEGG: ssm:Spirs_1553 tyrosine recombinase XerD; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; SPTR: DNA integration/recombination/invertion protein; IMG reference gene:2503956931; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase; tyrosine recombinase XerC complement(749678..750607) Sphaerochaeta coccoides DSM 17374 10494942 YP_004411258.1 CDS Spico_0648 NC_015436.1 750611 751882 R COGs: COG0206 Cell division GTPase; InterPro IPR003008:IPR018316:IPR000158; KEGG: ssm:Spirs_1552 cell division protein FtsZ; PFAM: Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer sandwich domain; SMART: Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer sandwich domain; SPTR: Cell division protein FtsZ; TIGRFAM: Cell division protein FtsZ, N-terminal; IMG reference gene:2503956932; PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ; cell division protein FtsZ complement(750611..751882) Sphaerochaeta coccoides DSM 17374 10494943 YP_004411259.1 CDS Spico_0649 NC_015436.1 751932 753182 R COGs: COG0849 Actin-like ATPase involved in cell division; InterPro IPR003494:IPR020823; KEGG: ssm:Spirs_1551 cell division protein FtsA; PFAM: Cell division protein FtsA domain; SMART: Cell division protein FtsA domain; SPTR: Cell division protein FtsA; TIGRFAM: Cell division protein family FtsA; IMG reference gene:2503956933; PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA; cell division protein FtsA complement(751932..753182) Sphaerochaeta coccoides DSM 17374 10494944 YP_004411260.1 CDS Spico_0650 NC_015436.1 753182 754021 R InterPro IPR013685; KEGG: dma:DMR_33240 cell division protein FtsQ; PFAM: Polypeptide-transport-associated, FtsQ-type; SPTR: cell division protein FtsQ; IMG reference gene:2503956934; PFAM: POTRA domain, FtsQ-type; cell division protein FtsQ complement(753182..754021) Sphaerochaeta coccoides DSM 17374 10494945 YP_004411261.1 CDS Spico_0651 NC_015436.1 754014 755399 R COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182; KEGG: sta:STHERM_c08960 hypothetical protein; PFAM: Cell cycle protein; SPTR: uncharacterized protein; IMG reference gene:2503956935; PFAM: Cell cycle protein; cell cycle protein complement(754014..755399) Sphaerochaeta coccoides DSM 17374 10494946 YP_004411262.1 CDS Spico_0652 NC_015436.1 755425 756489 R COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; HAMAP: Phospho-N-acetylmuramoyl-pentapeptide transferase; InterPro IPR018480:IPR000715:IPR003524; KEGG: ssm:Spirs_1548 phospho-N-acetylmuramoyl-pentapeptide-transferas E; PFAM: Glycosyl transferase, family 4; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; SPTR:Phospho-N-acetylmuramoyl-pentapeptide-transfer ase; IMG reference gene:2503956936; PFAM: Glycosyl transferase 4; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; Phospho-N-acetylmuramoyl-pentapeptide- transferase complement(755425..756489) Sphaerochaeta coccoides DSM 17374 10494947 YP_004411263.1 CDS Spico_0653 NC_015436.1 756477 757910 R COGs: COG0770 UDP-N-acetylmuramyl pentapeptide synthase; InterPro IPR000713:IPR013221:IPR005863; KEGG: ssm:Spirs_1547 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; PRIAM:UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-a lanineligase; SPTR:UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-al anineligase; TIGRFAM: UDP-MurNAc-pentapeptide synthetase; IMG reference gene:2503956937; PFAM: Mur ligase, glutamate ligase domain; Mur ligase, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase complement(756477..757910) Sphaerochaeta coccoides DSM 17374 10494948 YP_004411264.1 CDS Spico_0654 NC_015436.1 757919 758335 R KEGG: cdi:DIP2252 integral membrane protein; SPTR: conserved integral membrane protein; IMG reference gene:2503956938; TIGRFAM: cell division protein FtsL; hypothetical protein complement(757919..758335) Sphaerochaeta coccoides DSM 17374 10494949 YP_004411265.1 CDS Spico_0655 NC_015436.1 758328 759272 R COGs: COG0275 S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; HAMAP: S-adenosyl-L-methionine-dependent methyltransferase, MraW; InterPro IPR002903; KEGG: tde:TDE1198 S-adenosyl-methyltransferase MraW; PFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; SPTR: Ribosomal RNA small subunit methyltransferase H; TIGRFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; IMG reference gene:2503956939; PFAM: MraW methylase; TIGRFAM: S-adenosyl-methyltransferase MraW; Ribosomal RNA small subunit methyltransferase H complement(758328..759272) Sphaerochaeta coccoides DSM 17374 10494950 YP_004411266.1 CDS Spico_0656 NC_015436.1 759269 759739 R COGs: COG2001 conserved hypothetical protein; HAMAP: MraZ; InterPro IPR020603:IPR003444; KEGG: ssm:Spirs_1544 MraZ protein; PFAM: MraZ domain; SPTR: Protein MraZ; TIGRFAM: MraZ; IMG reference gene:2503956940; PFAM: MraZ protein; TIGRFAM: mraZ protein; protein mraZ complement(759269..759739) Sphaerochaeta coccoides DSM 17374 10494951 YP_004411267.1 CDS Spico_0657 NC_015436.1 760067 761665 R COGs: COG1543 conserved hypothetical protein; InterPro IPR004300:IPR015293; KEGG: ssm:Spirs_1542 domain of unknown function DUF1957; PFAM: Domain of unknown function DUF1957; Glycoside hydrolase, family 57, N-terminal; SPTR: uncharacterized protein; IMG reference gene:2503956941; PFAM: Domain of unknown function (DUF1957); Glycosyl hydrolase 57; 1,4-alpha-glucan-branching protein complement(760067..761665) Sphaerochaeta coccoides DSM 17374 10494952 YP_004411268.1 CDS Spico_0658 NC_015436.1 761662 762405 R KEGG: sta:STHERM_c08890 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956942; hypothetical protein complement(761662..762405) Sphaerochaeta coccoides DSM 17374 10494953 YP_004411269.1 CDS Spico_0659 NC_015436.1 762606 764963 D InterPro IPR004300; KEGG: ssm:Spirs_1540 glycoside hydrolase 57; PFAM: Glycoside hydrolase, family 57, N-terminal; SPTR: Glycoside hydrolase, family 57; IMG reference gene:2503956943; PFAM: Glycosyl hydrolase 57; Domain of unknown function (DUF3536); glycoside hydrolase 57 762606..764963 Sphaerochaeta coccoides DSM 17374 10494954 YP_004411270.1 CDS Spico_0660 NC_015436.1 764938 766632 R COGs: COG0497 ATPase involved in DNA repair; InterPro IPR003395:IPR003593:IPR004604; KEGG: sta:STHERM_c08840 DNA repair protein RecN; PFAM: RecF/RecN/SMC; SMART: ATPase, AAA+ type, core; SPTR: DNA repair protein RecN; TIGRFAM: DNA recombination/repair protein RecN; IMG reference gene:2503956944; PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN; DNA repair protein RecN complement(764938..766632) Sphaerochaeta coccoides DSM 17374 10494955 YP_004411271.1 CDS Spico_0661 NC_015436.1 766625 767494 R COGs: COG0061 sugar kinase; HAMAP: Inorganic polyphosphate/ATP-NAD kinase, predicted; InterPro IPR002504; KEGG: ssm:Spirs_1534 ATP-NAD/AcoX kinase; PFAM: Inorganic polyphosphate/ATP-NAD kinase, predicted; SPTR: Probable inorganic polyphosphate/ATP-NAD kinase; IMG reference gene:2503956945; PFAM: ATP-NAD kinase; inorganic polyphosphate/ATP-NAD kinase complement(766625..767494) Sphaerochaeta coccoides DSM 17374 10494956 YP_004411272.1 CDS Spico_0662 NC_015436.1 767509 768549 R COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: ssm:Spirs_1533 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: Aminotransferase, DegT/DnrJ/EryC1/StrS family; IMG reference gene:2503956946; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase complement(767509..768549) Sphaerochaeta coccoides DSM 17374 10494957 YP_004411273.1 CDS Spico_0663 NC_015436.1 774381 774947 D COGs: COG0450 Peroxiredoxin; InterPro IPR000866:IPR017559; KEGG: lbf:LBF_2905 peroxiredoxin; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; PRIAM: Peroxiredoxin; SPTR: Peroxiredoxin; TIGRFAM: Peroxiredoxin; IMG reference gene:2503956951; PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; TIGRFAM: peroxiredoxin; peroxiredoxin 774381..774947 Sphaerochaeta coccoides DSM 17374 10494962 YP_004411274.1 CDS Spico_0664 NC_015436.1 775134 776699 D COGs: COG0606 ATPase with chaperone activity; InterPro IPR000523:IPR003593; KEGG: sta:STHERM_c05260 hypothetical protein; PFAM: Magnesium chelatase, ChlI subunit; SMART: ATPase, AAA+ type, core; SPTR: uncharacterized protein; IMG reference gene:2503956952; PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein; magnesium chelatase ChlI subunit 775134..776699 Sphaerochaeta coccoides DSM 17374 10494963 YP_004411275.1 CDS Spico_0667 NC_015436.1 777664 778596 D COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: ara:Arad_4624 sugar ABC transporter; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport system inner membrane component; IMG reference gene:2503956955; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 1 777664..778596 Sphaerochaeta coccoides DSM 17374 10494966 YP_004411276.1 CDS Spico_0668 NC_015436.1 778600 779448 D COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: kfl:Kfla_2100 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport system inner membrane component; IMG reference gene:2503956956; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 2 778600..779448 Sphaerochaeta coccoides DSM 17374 10494967 YP_004411277.1 CDS Spico_0669 NC_015436.1 779481 780773 D COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: ach:Achl_3128 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein family 1; IMG reference gene:2503956957; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein 779481..780773 Sphaerochaeta coccoides DSM 17374 10494968 YP_004411278.1 CDS Spico_0670 NC_015436.1 780914 783034 D KEGG: cpy:Cphy_3399 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956958; hypothetical protein 780914..783034 Sphaerochaeta coccoides DSM 17374 10494969 YP_004411279.1 CDS Spico_0671 NC_015436.1 783089 784627 D COGs: COG3507 Beta-xylosidase; InterPro IPR006710; KEGG: cpy:Cphy_3398 glycoside hydrolase; PFAM: Glycoside hydrolase, family 43; PRIAM: Xylan 1,4-beta-xylosidase; SPTR: Glycoside hydrolase 43; IMG reference gene:2503956959; PFAM: Glycosyl hydrolases family 43; xylan 1,4-beta-xylosidase 783089..784627 Sphaerochaeta coccoides DSM 17374 10494970 YP_004411280.1 CDS Spico_0672 NC_015436.1 785312 787483 D COGs: COG2217 Cation transport ATPase; InterProIPR006121:IPR008250:IPR005834:IPR006404:IPR 006416:IPR001757; KEGG: efa:EF1400 cadmium-translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; PRIAM: Cadmium-exporting ATPase; SPTR: Cadmium-translocating P-type ATPase; TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; IMG reference gene:2503956962; PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; heavy metal translocating P-type ATPase 785312..787483 Sphaerochaeta coccoides DSM 17374 10494973 YP_004411281.1 CDS Spico_0673 NC_015436.1 787822 789834 D COGs: COG0480 Translation elongation factors (GTPase); InterProIPR000795:IPR004161:IPR005517:IPR000640:IPR 005225:IPR004540; KEGG: ssm:Spirs_2534 translation elongation factor G; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; SMART: Translation elongation factor EFG/EF2, C-terminal; Translation elongation factor EFG/EF2, domain IV; SPTR: Elongation factor G 1; TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; IMG reference gene:2503956963; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; translation elongation factor 2 (EF-2/EF-G) 787822..789834 Sphaerochaeta coccoides DSM 17374 10494974 YP_004411282.1 CDS Spico_0674 NC_015436.1 790046 792127 D COGs: COG0480 Translation elongation factors (GTPase); InterPro IPR000795:IPR005517:IPR000640:IPR005225; KEGG: ssm:Spirs_2536 small GTP-binding protein; PFAM: Translation elongation factor EFG/EF2, domain IV; Protein synthesis factor, GTP-binding; Translation elongation factor EFG/EF2, C-terminal; SMART: Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; SPTR: translation elongation factor G; TIGRFAM: Small GTP-binding protein; IMG reference gene:2503956964; PFAM: Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; translation elongation factor 2 (EF-2/EF-G) 790046..792127 Sphaerochaeta coccoides DSM 17374 10494975 YP_004411283.1 CDS Spico_0675 NC_015436.1 792163 792918 R COGs: COG0220 S-adenosylmethionine-dependent methyltransferase; HAMAP: tRNA (guanine-N-7) methyltransferase; InterPro IPR003358; KEGG: tde:TDE1130 methyltransferase, PFAM: tRNA (guanine-N-7) methyltransferase; SPTR: tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N-7) methyltransferase; IMG reference gene:2503956965; PFAM: methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; tRNA (guanine-N(7)-)-methyltransferase complement(792163..792918) Sphaerochaeta coccoides DSM 17374 10494976 YP_004411284.1 CDS Spico_0676 NC_015436.1 792932 796210 R COGs: COG1197 Transcription-repair coupling factor (superfamily II helicase); InterProIPR003711:IPR011545:IPR001650:IPR005118:IPR 014001:IPR004576; KEGG: ssm:Spirs_2540 transcription-repair coupling factor; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Transcription factor CarD; Helicase, C-terminal; Transcription-repair-coupling factor domain; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: Transcription-repair coupling factor; TIGRFAM: Transcription-repair coupling factor; IMG reference gene:2503956966; PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd); transcription-repair coupling factor complement(792932..796210) Sphaerochaeta coccoides DSM 17374 10494977 YP_004411285.1 CDS Spico_0677 NC_015436.1 796244 797062 D COGs: COG0483 fructose-1 6-bisphosphatase of inositol monophosphatase; InterPro IPR000760; KEGG: ssm:Spirs_3133 inositol monophosphatase; PFAM: Inositol monophosphatase; SPTR: Inositol monophosphatase; IMG reference gene:2503956967; PFAM: Inositol monophosphatase; inositol monophosphatase 796244..797062 Sphaerochaeta coccoides DSM 17374 10494978 YP_004411286.1 CDS Spico_0678 NC_015436.1 797158 797892 R COGs: COG1738 conserved hypothetical protein; InterPro IPR003744; KEGG: ssm:Spirs_3136 hypothetical protein; PFAM: Protein of unknown function DUF165; SPTR: uncharacterized protein; TIGRFAM: Protein of unknown function DUF165; IMG reference gene:2503956968; PFAM: Uncharacterized ACR, YhhQ family COG1738; TIGRFAM: conserved hypothetical integral membrane protein; hypothetical protein complement(797158..797892) Sphaerochaeta coccoides DSM 17374 10494979 YP_004411287.1 CDS Spico_0679 NC_015436.1 798011 798667 R KEGG: ssm:Spirs_1463 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956969; hypothetical protein complement(798011..798667) Sphaerochaeta coccoides DSM 17374 10494980 YP_004411288.1 CDS Spico_0680 NC_015436.1 798965 799453 D COGs: COG1327 transcriptional regulator protein consists of a Zn-ribbon and ATP-cone domains; HAMAP: Ribonucleotide reductase regulator NrdR-like; InterPro IPR005144:IPR003796; KEGG: ssm:Spirs_1455 ATP-cone domain protein; PFAM: ATP-cone; SPTR: Transcriptional repressor NrdR; TIGRFAM: Ribonucleotide reductase regulator NrdR-like; IMG reference gene:2503956970; PFAM: ATP cone domain; TIGRFAM: transcriptional regulator NrdR; NrdR family transcriptional regulator 798965..799453 Sphaerochaeta coccoides DSM 17374 10494981 YP_004411289.1 CDS Spico_0681 NC_015436.1 799478 800632 R COGs: COG0232 dGTP triphosphohydrolase; InterPro IPR006674:IPR003607; KEGG: ssm:Spirs_1451 metal-dependent phosphohydrolase HD sub domain protein; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: Deoxyguanosinetriphosphate triphosphohydrolase-like protein; IMG reference gene:2503956971; PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; metal-dependent phosphohydrolase HD sub domain-containing protein complement(799478..800632) Sphaerochaeta coccoides DSM 17374 10494982 YP_004411290.1 CDS Spico_0682 NC_015436.1 800702 801145 D KEGG: ath:AT3G44920 ATCHX11; monovalent cation:proton antiporter/ sodium:hydrogen antiporter; SPTR: Cation/H(+) antiporter 11; IMG reference gene:2503956972; hypothetical protein 800702..801145 Sphaerochaeta coccoides DSM 17374 10494983 YP_004411291.1 CDS Spico_0683 NC_015436.1 801169 801753 D COGs: COG0703 Shikimate kinase; HAMAP: Shikimate kinase; InterPro IPR000623; KEGG: sta:STHERM_c05910 shikimate kinase; PFAM: Shikimate kinase; SPTR: Shikimate kinase; IMG reference gene:2503956973; PFAM: Shikimate kinase; shikimate kinase 801169..801753 Sphaerochaeta coccoides DSM 17374 10494984 YP_004411292.1 CDS Spico_0684 NC_015436.1 801750 802841 D COGs: COG0082 Chorismate synthase; InterPro IPR000453; KEGG: sta:STHERM_c05920 chorismate synthase; PFAM: Chorismate synthase; PRIAM: Chorismate synthase; SPTR: Chorismate synthase; TIGRFAM: Chorismate synthase; IMG reference gene:2503956974; PFAM: Chorismate synthase; TIGRFAM: chorismate synthase; chorismate synthase 801750..802841 Sphaerochaeta coccoides DSM 17374 10494985 YP_004411293.1 CDS Spico_0685 NC_015436.1 802838 804505 D COGs: COG1061 DNA or RNA helicase of superfamily II; InterPro IPR006935:IPR001650:IPR014001; KEGG: ssm:Spirs_2851 helicase domain protein; PFAM: Helicase, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: Helicase domain protein; IMG reference gene:2503956975; PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; helicase 802838..804505 Sphaerochaeta coccoides DSM 17374 10494986 YP_004411294.1 CDS Spico_0686 NC_015436.1 804502 806565 D KEGG: ssm:Spirs_2852 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956976; hypothetical protein 804502..806565 Sphaerochaeta coccoides DSM 17374 10494987 YP_004411295.1 CDS Spico_0687 NC_015436.1 806640 808097 R COGs: COG0169 Shikimate 5-dehydrogenase; HAMAP: Dehydroquinase class I; Shikimate, quinate/shikimate dehydrogenase; InterProIPR001381:IPR013708:IPR006151:IPR022893:IPR 011342; KEGG: sta:STHERM_c02970 3-dehydroquinate dehydratase, type 1; PFAM: Dehydroquinase class I; Shikimate dehydrogenase substrate binding, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; PRIAM: 3-dehydroquinate dehydratase., Shikimate dehydrogenase; SPTR: 3-dehydroquinate dehydratase, type 1; TIGRFAM: Shikimate dehydrogenase; Dehydroquinase class I; IMG reference gene:2503956977; PFAM: Shikimate dehydrogenase substrate binding domain; Type I 3-dehydroquinase; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; 3-dehydroquinate dehydratase, type I; 3-dehydroquinate dehydratase complement(806640..808097) Sphaerochaeta coccoides DSM 17374 10494988 YP_004411296.1 CDS Spico_0688 NC_015436.1 808298 810247 D COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003439:IPR003593; KEGG: ssm:Spirs_2861 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; IMG reference gene:2503956978; PFAM: ABC transporter; ABC transporter 808298..810247 Sphaerochaeta coccoides DSM 17374 10494989 YP_004411297.1 CDS Spico_0689 NC_015436.1 810237 810917 D COGs: COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; HAMAP: Maf-like protein; InterPro IPR003697; KEGG: pth:PTH_0815 nucleotide-binding protein; PFAM: Maf-like protein; SPTR: Maf-like protein COLAER_00364; TIGRFAM: Maf-like protein; IMG reference gene:2503956979; PFAM: Maf-like protein; TIGRFAM: MAF protein; Septum formation protein Maf 810237..810917 Sphaerochaeta coccoides DSM 17374 10494990 YP_004411298.1 CDS Spico_0690 NC_015436.1 810973 811953 D COGs: COG0052 Ribosomal protein S2; InterPro IPR001865:IPR005706; KEGG: ssm:Spirs_2864 ribosomal protein S2; PFAM: Ribosomal protein S2; SPTR: 30S ribosomal protein S2; TIGRFAM: Ribosomal protein S2, bacteria/mitochondria/plastid; IMG reference gene:2503956980; PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; 30S ribosomal protein S2 810973..811953 Sphaerochaeta coccoides DSM 17374 10494991 YP_004411299.1 CDS Spico_0691 NC_015436.1 811972 812817 D COGs: COG0264 Translation elongation factor Ts; HAMAP: Translation elongation factor EFTs/EF1B; InterPro IPR000449:IPR014039:IPR001816; KEGG: ssm:Spirs_2865 translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B, dimerisation; Ubiquitin-associated/translation elongation factor EF1B, N-terminal; SPTR: Elongation factor Ts; TIGRFAM: Translation elongation factor EFTs/EF1B; IMG reference gene:2503956981; PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts; elongation factor Ts 811972..812817 Sphaerochaeta coccoides DSM 17374 10494992 YP_004411300.1 CDS Spico_0692 NC_015436.1 812861 813427 D COGs: COG0233 Ribosome recycling factor; HAMAP: Ribosome recycling factor, bacterial-like; InterPro IPR002661:IPR015998; KEGG: ssm:Spirs_2866 ribosome recycling factor; PFAM: Ribosome recycling factor; SPTR: Ribosome-recycling factor; TIGRFAM: Ribosome recycling factor; IMG reference gene:2503956982; PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor; ribosome recycling factor 812861..813427 Sphaerochaeta coccoides DSM 17374 10494993 YP_004411301.1 CDS Spico_0693 NC_015436.1 813429 814148 D COGs: COG0020 Undecaprenyl pyrophosphate synthase; HAMAP:Di-trans-poly-cis-decaprenylcistransferase-li ke; InterPro IPR001441; KEGG: sta:STHERM_c13090 undecaprenyl pyrophosphate synthetase; PFAM:Di-trans-poly-cis-decaprenylcistransferase-lik e; PRIAM: Di-trans,poly-cis-decaprenylcistransferase; SPTR: Undecaprenyl pyrophosphate synthetase; TIGRFAM:Di-trans-poly-cis-decaprenylcistransferase- like; IMG reference gene:2503956983; PFAM: undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; UDP pyrophosphate synthetase 813429..814148 Sphaerochaeta coccoides DSM 17374 10494994 YP_004411302.1 CDS Spico_0694 NC_015436.1 814145 814996 D COGs: COG4589 CDP-diglyceride synthetase/phosphatidate cytidylyltransferase; InterPro IPR000374; KEGG: tde:TDE2343 phosphatidate cytidylyltransferase; PFAM: Phosphatidate cytidylyltransferase; SPTR: Phosphatidate cytidylyltransferase; IMG reference gene:2503956984; PFAM: Cytidylyltransferase; phosphatidate cytidylyltransferase 814145..814996 Sphaerochaeta coccoides DSM 17374 10494995 YP_004411303.1 CDS Spico_0695 NC_015436.1 815010 816182 D COGs: COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase; HAMAP: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro IPR013512:IPR013644:IPR003821; KEGG: sta:STHERM_c13110 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal; 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal; PRIAM: 1-deoxy-D-xylulose-5-phosphate reductoisomerase; SPTR: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; IMG reference gene:2503956985; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 815010..816182 Sphaerochaeta coccoides DSM 17374 10494996 YP_004411304.1 CDS Spico_0696 NC_015436.1 816182 817582 D COGs: COG0750 membrane-associated Zn-dependent protease 1; InterPro IPR008915; KEGG: ssm:Spirs_2870 membrane-associated zinc metalloprotease; PFAM: Peptidase M50; SPTR: uncharacterized protein; IMG reference gene:2503956986; PFAM: Peptidase M50; TIGRFAM: RIP metalloprotease RseP; peptidase M50 816182..817582 Sphaerochaeta coccoides DSM 17374 10494997 YP_004411305.1 CDS Spico_0697 NC_015436.1 817590 818960 R COGs: COG0305 Replicative DNA helicase; InterPro IPR007693:IPR007694:IPR003593:IPR007692; KEGG: ssm:Spirs_2874 replicative DNA helicase; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal; SMART: ATPase, AAA+ type, core; SPTR: uncharacterized protein; TIGRFAM: DNA helicase, DnaB type; IMG reference gene:2503956987; PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase; replicative DNA helicase complement(817590..818960) Sphaerochaeta coccoides DSM 17374 10494998 YP_004411306.1 CDS Spico_0698 NC_015436.1 818964 819632 R COGs: COG0359 Ribosomal protein L9; HAMAP: Ribosomal protein L9, bacteria/chloroplast; InterPro IPR020070:IPR020069:IPR020594; KEGG: ssm:Spirs_2875 ribosomal protein L9; PFAM: Ribosomal protein L9, N-terminal; Ribosomal protein L9, C-terminal; SPTR: 50S ribosomal protein L9; TIGRFAM: Ribosomal protein L9, bacteria/chloroplast; IMG reference gene:2503956988; PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9; 50S ribosomal protein L9 complement(818964..819632) Sphaerochaeta coccoides DSM 17374 10494999 YP_004411307.1 CDS Spico_0699 NC_015436.1 819616 820590 R KEGG: sta:STHERM_c13160 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956989; hypothetical protein complement(819616..820590) Sphaerochaeta coccoides DSM 17374 10495000 YP_004411308.1 CDS Spico_0700 NC_015436.1 820635 820922 R COGs: COG0238 Ribosomal protein S18; HAMAP: Ribosomal protein S18; InterPro IPR001648; KEGG: ssm:Spirs_2877 ribosomal protein S18; PFAM: Ribosomal protein S18; SPTR: 30S ribosomal protein S18; TIGRFAM: Ribosomal protein S18; IMG reference gene:2503956990; PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18; 30S ribosomal protein S18 complement(820635..820922) Sphaerochaeta coccoides DSM 17374 10495001 YP_004411309.1 CDS Spico_0701 NC_015436.1 820967 821452 R COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR000424:IPR011344; KEGG: ssm:Spirs_2878 single-strand binding protein; PFAM: Primosome PriB/single-strand DNA-binding; SPTR: Single-stranded DNA-binding protein; TIGRFAM: Single-strand DNA-binding; IMG reference gene:2503956991; PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); single-strand binding protein complement(820967..821452) Sphaerochaeta coccoides DSM 17374 10495002 YP_004411310.1 CDS Spico_0702 NC_015436.1 821465 821767 R COGs: COG0360 Ribosomal protein S6; HAMAP: Ribosomal protein S6, plastid/chloroplast; InterPro IPR000529:IPR020814; KEGG: ssm:Spirs_2879 ribosomal protein S6; PFAM: Ribosomal protein S6; SPTR: 30S ribosomal protein S6; TIGRFAM: Ribosomal protein S6; IMG reference gene:2503956992; PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6; 30S ribosomal protein S6 complement(821465..821767) Sphaerochaeta coccoides DSM 17374 10495003 YP_004411311.1 CDS Spico_0703 NC_015436.1 822214 823599 D COGs: COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase; InterPro IPR013221:IPR004101:IPR005762; KEGG: sta:STHERM_c03310 UDP-N-acetylmuramoylalanine--D-glutamate ligase; PFAM: Mur ligase, central; Mur ligase, C-terminal; PRIAM: UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; SPTR: UDP-N-acetylmuramoylalanine--D-glutamate ligase; TIGRFAM: UDP-N-acetylmuramoylalanine-D-glutamate ligase; manually curated; IMG reference gene:2503956993; PFAM: Mur ligase middle domain; UDP-N-acetylmuramoylalanine--D-glutamate ligase 822214..823599 Sphaerochaeta coccoides DSM 17374 10495004 YP_004411312.1 CDS Spico_0704 NC_015436.1 823576 824595 R COGs: COG2348 Uncharacterized protein involved in methicillin resistance; InterPro IPR003447; KEGG: ssm:Spirs_2888 methicillin resistance protein; PFAM: Methicillin resistance protein; SPTR: FemAB family protein; IMG reference gene:2503956994; PFAM: FemAB family; methicillin resistance protein complement(823576..824595) Sphaerochaeta coccoides DSM 17374 10495005 YP_004411313.1 CDS Spico_0705 NC_015436.1 824614 826860 R COGs: COG0143 Methionyl-tRNA synthetase; HAMAP: Methionyl-tRNA synthetase; InterPro IPR015413:IPR002547:IPR014758; KEGG: ssm:Spirs_2889 methionyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class I (M); tRNA-binding domain; PRIAM: Methionine--tRNA ligase; SPTR: Methionyl-tRNA synthetase; TIGRFAM: Methionyl-tRNA synthetase, class Ia; IMG reference gene:2503956995; PFAM: tRNA synthetases class I (M); Anticodon-binding domain; tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; methionyl-tRNA synthetase; methionyl-tRNA synthetase complement(824614..826860) Sphaerochaeta coccoides DSM 17374 10495006 YP_004411314.1 CDS Spico_0706 NC_015436.1 827045 828040 D COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107:IPR010201; KEGG: sta:STHERM_c16310 hypothetical protein; PFAM: Band 7 protein; SMART: Band 7 protein; SPTR: uncharacterized protein; TIGRFAM: HflK; IMG reference gene:2503956996; PFAM: SPFH domain / Band 7 family; TIGRFAM: HflK protein; protease FtsH subunit HflK 827045..828040 Sphaerochaeta coccoides DSM 17374 10495007 YP_004411315.1 CDS Spico_0707 NC_015436.1 828040 829023 D COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107:IPR010200; KEGG: ssm:Spirs_2891 HflC protein; PFAM: Band 7 protein; SMART: Band 7 protein; SPTR: HflC protein; TIGRFAM: HflC; IMG reference gene:2503956997; PFAM: SPFH domain / Band 7 family; TIGRFAM: HflC protein; HflC protein 828040..829023 Sphaerochaeta coccoides DSM 17374 10495008 YP_004411316.1 CDS Spico_0708 NC_015436.1 829160 829501 D KEGG: atu:Atu2463 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956998; hypothetical protein 829160..829501 Sphaerochaeta coccoides DSM 17374 10495009 YP_004411317.1 CDS Spico_0709 NC_015436.1 829522 831225 R KEGG: clj:CLJU_c23260 hypothetical protein; SPTR: Uncharacterized membrane protein; IMG reference gene:2503956999; hypothetical protein complement(829522..831225) Sphaerochaeta coccoides DSM 17374 10495010 YP_004411318.1 CDS Spico_0710 NC_015436.1 831222 832052 R COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: kol:Kole_0152 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC superfamily ATP binding cassette transporter, ABC protein; IMG reference gene:2503957000; PFAM: ABC transporter; ABC transporter complement(831222..832052) Sphaerochaeta coccoides DSM 17374 10495011 YP_004411319.1 CDS Spico_0711 NC_015436.1 832325 833566 D COGs: COG0137 Argininosuccinate synthase; HAMAP: Argininosuccinate synthase; InterPro IPR001518; KEGG: trq:TRQ2_1045 argininosuccinate synthase; PFAM: Argininosuccinate synthase; PRIAM: Argininosuccinate synthase; SPTR: Argininosuccinate synthase; TIGRFAM: Argininosuccinate synthase; IMG reference gene:2503957001; PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase; argininosuccinate synthase 832325..833566 Sphaerochaeta coccoides DSM 17374 10495012 YP_004411320.1 CDS Spico_0712 NC_015436.1 833660 834031 R InterPro IPR001845; KEGG: clo:HMPREF0868_0433 transcriptional repressor SmtB family protein; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Transcriptional regulator, ArsR family; IMG reference gene:2503957002; PFAM: Bacterial regulatory protein, arsR family; regulatory protein ArsR complement(833660..834031) Sphaerochaeta coccoides DSM 17374 10495013 YP_004411321.1 CDS Spico_0713 NC_015436.1 834158 836218 R COGs: COG3661 Alpha-glucuronidase; InterPro IPR011100:IPR011099; KEGG: rbi:RB2501_04530 alpha-glucuronidase; PFAM: Glycosyl hydrolase 67 middle; Glycosyl hydrolase 67, C-terminal; PRIAM: Alpha-glucuronidase; SPTR: Alpha-glucuronidase; IMG reference gene:2503957003; PFAM: Glycosyl hydrolase 67 C-terminus; Glycosyl hydrolase 67 middle domain; Glycosyl hydrolase 67 N-terminus; alpha-glucuronidase complement(834158..836218) Sphaerochaeta coccoides DSM 17374 10495014 YP_004411322.1 CDS Spico_0714 NC_015436.1 836438 838081 R COGs: COG1653 ABC-type sugar transport system periplasmic component; KEGG: sta:STHERM_c18860 sugar ABC transporter substrate-binding protein; SPTR: Sugar ABC transporter substrate-binding protein; IMG reference gene:2503957004; PFAM: Bacterial extracellular solute-binding protein; sugar ABC transporter substrate-binding protein complement(836438..838081) Sphaerochaeta coccoides DSM 17374 10495015 YP_004411323.1 CDS Spico_0715 NC_015436.1 838119 838991 R COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: sta:STHERM_c18870 transporter; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Transporter; IMG reference gene:2503957005; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein complement(838119..838991) Sphaerochaeta coccoides DSM 17374 10495016 YP_004411324.1 CDS Spico_0716 NC_015436.1 839002 839964 R COGs: COG4209 ABC-type polysaccharide transport system permease component; InterPro IPR000515; KEGG: sta:STHERM_c18880 transporter; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Transporter; IMG reference gene:2503957006; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 1 complement(839002..839964) Sphaerochaeta coccoides DSM 17374 10495017 YP_004411325.1 CDS Spico_0717 NC_015436.1 840287 841387 D COGs: COG1609 Transcriptional regulators; InterPro IPR000524:IPR001761; KEGG: ttm:Tthe_0670 transcriptional regulator, GntR family with LacI sensor; PFAM: HTH transcriptional regulator, GntR; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, GntR; SPTR: Transcriptional regulators; IMG reference gene:2503957007; PFAM: Bacterial regulatory proteins, gntR family; family; GntR family transcriptional regulator 840287..841387 Sphaerochaeta coccoides DSM 17374 10495018 YP_004411326.1 CDS Spico_0718 NC_015436.1 841384 844617 D COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006104:IPR006103; KEGG: pjd:Pjdr2_2523 glycoside hydrolase 2 sugar binding; PFAM: Glycoside hydrolase, family 2, carbohydrate-binding; Glycoside hydrolase, family 2, TIM barrel; PRIAM: Beta-galactosidase; SPTR: Glycoside hydrolase 2 sugar binding; IMG reference gene:2503957008; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain; beta-galactosidase 841384..844617 Sphaerochaeta coccoides DSM 17374 10495019 YP_004411327.1 CDS Spico_0719 NC_015436.1 844631 845314 D InterPro IPR001087; KEGG: sli:Slin_3977 lipolytic protein G-D-S-L family; PFAM: Lipase, GDSL; SPTR: acetylhydrolase; IMG reference gene:2503957009; PFAM: GDSL-like Lipase/Acylhydrolase; G-D-S-L family lipolytic protein 844631..845314 Sphaerochaeta coccoides DSM 17374 10495020 YP_004411328.1 CDS Spico_0720 NC_015436.1 845339 847468 R COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764:IPR002772; KEGG: cbe:Cbei_4974 glycoside hydrolase 3 protein; PFAM: Glycoside hydrolase, family 3, C-terminal; Glycoside hydrolase, family 3, N-terminal; PRIAM: Beta-glucosidase; SPTR: Glycoside hydrolase, family 3 domain protein; IMG reference gene:2503957010; PFAM: Glycosyl hydrolase 3 C terminal domain; Glycosyl hydrolase 3 N terminal domain; Beta-glucosidase complement(845339..847468) Sphaerochaeta coccoides DSM 17374 10495021 YP_004411329.1 CDS Spico_0721 NC_015436.1 847560 848408 R COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: pjd:Pjdr2_5596 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport system inner membrane component; IMG reference gene:2503957011; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 2 complement(847560..848408) Sphaerochaeta coccoides DSM 17374 10495022 YP_004411330.1 CDS Spico_0722 NC_015436.1 848405 849373 R COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: pjd:Pjdr2_5597 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport system inner membrane component; IMG reference gene:2503957012; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 1 complement(848405..849373) Sphaerochaeta coccoides DSM 17374 10495023 YP_004411331.1 CDS Spico_0723 NC_015436.1 849451 850803 R COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: pjd:Pjdr2_5598 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: bacterial extracellular solute-binding protein; IMG reference gene:2503957013; carbohydrate ABC transporter substrate-binding protein complement(849451..850803) Sphaerochaeta coccoides DSM 17374 10495024 YP_004411332.1 CDS Spico_0724 NC_015436.1 850873 853008 R InterPro IPR000852; KEGG: ttm:Tthe_0982 xylan 1,4-beta-xylosidase; PFAM: Glycoside hydrolase, family 52; PRIAM: Xylan 1,4-beta-xylosidase; SPTR: Xylan 1,4-beta-xylosidase; IMG reference gene:2503957014; PFAM: Glycosyl hydrolase 52; xylan 1,4-beta-xylosidase complement(850873..853008) Sphaerochaeta coccoides DSM 17374 10495025 YP_004411333.1 CDS Spico_0725 NC_015436.1 853114 853755 R COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789:IPR000792; KEGG: ote:Oter_0043 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SPTR: Two component transcriptional regulator, LuxR family; IMG reference gene:2503957015; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; LuxR family transcriptional regulator complement(853114..853755) Sphaerochaeta coccoides DSM 17374 10495026 YP_004411334.1 CDS Spico_0726 NC_015436.1 853769 855916 R COGs: COG1609 Transcriptional regulators; InterPro IPR001761:IPR003594; KEGG: ssm:Spirs_1217 ATP-binding region ATPase domain protein; PFAM: ATPase-like, ATP-binding domain; Periplasmic binding protein/LacI transcriptional regulator; SMART: ATPase-like, ATP-binding domain; SPTR: Histidine kinase; IMG reference gene:2503957016; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; family; histidine kinase complement(853769..855916) Sphaerochaeta coccoides DSM 17374 10495027 YP_004411335.1 CDS Spico_0727 NC_015436.1 855971 856615 R COGs: COG0563 Adenylate kinase and related kinase; HAMAP: Adenylate kinase; InterPro IPR000850:IPR007862:IPR006259; KEGG: ssm:Spirs_1529 adenylate kinase; PFAM: Adenylate kinase; Adenylate kinase, active site lid domain; SPTR: Adenylate kinase; TIGRFAM: Adenylate kinase, subfamily; IMG reference gene:2503957017; PFAM: Adenylate kinase, active site lid; Adenylate kinase; TIGRFAM: adenylate kinases; adenylate kinase complement(855971..856615) Sphaerochaeta coccoides DSM 17374 10495028 YP_004411336.1 CDS Spico_0728 NC_015436.1 856797 857861 D COGs: COG0035 Uracil phosphoribosyltransferase; KEGG: ssm:Spirs_1527 phosphoribosyl transferase domain-containing protein; SPTR: Phosphoribosyl transferase domain protein; IMG reference gene:2503957018; uracil phosphoribosyltransferase 856797..857861 Sphaerochaeta coccoides DSM 17374 10495029 YP_004411337.1 CDS Spico_0729 NC_015436.1 857877 858479 D KEGG: aae:aq_854 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957019; hypothetical protein 857877..858479 Sphaerochaeta coccoides DSM 17374 10495030 YP_004411338.1 CDS Spico_0730 NC_015436.1 858476 858937 R COGs: COG0328 Ribonuclease HI; HAMAP: Ribonuclease H; InterPro IPR002156:IPR022892; KEGG: rce:RC1_3647 ribonuclease H; PFAM: Ribonuclease H domain; PRIAM: Ribonuclease H; SPTR: Ribonuclease H; IMG reference gene:2503957020; PFAM: RNase H; RNase HI complement(858476..858937) Sphaerochaeta coccoides DSM 17374 10495031 YP_004411339.1 CDS Spico_0731 NC_015436.1 858997 859275 R COGs: COG0760 Parvulin-like peptidyl-prolyl isomerase; InterPro IPR000297; KEGG: dsh:Dshi_3566 PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SPTR: PpiC-type peptidyl-prolyl cis-trans isomerase; IMG reference gene:2503957021; PFAM: PPIC-type PPIASE domain; PpiC-type peptidyl-prolyl cis-trans isomerase complement(858997..859275) Sphaerochaeta coccoides DSM 17374 10495032 YP_004411340.1 CDS Spico_0732 NC_015436.1 859558 860166 R InterPro IPR008172; KEGG: ssm:Spirs_2340 adenylyl cyclase CyaB; PFAM: Adenylate cyclase; SPTR: uncharacterized protein; IMG reference gene:2503957022; PFAM: CYTH domain; adenylate cyclase complement(859558..860166) Sphaerochaeta coccoides DSM 17374 10495033 YP_004411341.1 CDS Spico_0733 NC_015436.1 860168 860950 R KEGG: ssm:Spirs_2341 hypothetical protein; SPTR: membrane protein; IMG reference gene:2503957023; hypothetical protein complement(860168..860950) Sphaerochaeta coccoides DSM 17374 10495034 YP_004411342.1 CDS Spico_0734 NC_015436.1 861063 862253 R InterPro IPR011701; KEGG: sfu:Sfum_0552 major facilitator transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; IMG reference gene:2503957024; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein complement(861063..862253) Sphaerochaeta coccoides DSM 17374 10495035 YP_004411343.1 CDS Spico_0735 NC_015436.1 862368 862820 D COGs: COG1963 conserved hypothetical protein; InterPro IPR003832; KEGG: msv:Mesil_2435 acid phosphatase/vanadium-dependent haloperoxidase related protein; PFAM: Acid phosphatase/vanadium-dependent haloperoxidase-related; SPTR: Acid phosphatase/vanadium-dependent haloperoxidase related protein; IMG reference gene:2503957025; PFAM: Divergent PAP2 family; acid phosphatase/vanadium-dependent haloperoxidase related protein 862368..862820 Sphaerochaeta coccoides DSM 17374 10495036 YP_004411344.1 CDS Spico_0736 NC_015436.1 863109 863885 D COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001638; KEGG: dal:Dalk_1255 extracellular solute-binding protein family 3; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; SPTR: Extracellular solute-binding protein family 3; IMG reference gene:2503957026; PFAM: Bacterial extracellular solute-binding proteins, family 3; ABC transporter substrate-binding protein 863109..863885 Sphaerochaeta coccoides DSM 17374 10495037 YP_004411345.1 CDS Spico_0737 NC_015436.1 864179 864943 D COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001638; KEGG: dvl:Dvul_1824 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; SPTR: Amino acid ABC transporter, periplasmic amino acid-binding protein; IMG reference gene:2503957027; PFAM: Bacterial extracellular solute-binding proteins, family 3; ABC transporter substrate-binding protein 864179..864943 Sphaerochaeta coccoides DSM 17374 10495038 YP_004411346.1 CDS Spico_0738 NC_015436.1 865088 866389 D COGs: COG2826 Transposase and inactivated derivatives IS30 family; InterPro IPR001584; KEGG: ccb:Clocel_0985 integrase catalytic region; PFAM: Integrase, catalytic core; SPTR: Transposase and inactivated derivatives, IS30 family; IMG reference gene:2503957028; integrase catalytic subunit 865088..866389 Sphaerochaeta coccoides DSM 17374 10495039 YP_004411347.1 CDS Spico_0739 NC_015436.1 866757 867626 D COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: gsu:GSU3405 amino acid ABC transporter, permease; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Amino acid ABC transporter, permease; TIGRFAM: Amino acid ABC transporter, permease, 3-TM domain, His/Glu/Gln/Arg/opine family; IMG reference gene:2503957029; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family; amino acid ABC transporter permease 866757..867626 Sphaerochaeta coccoides DSM 17374 10495040 YP_004411348.1 CDS Spico_0740 NC_015436.1 867619 868359 D COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: afu:AF0680 glutamine ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Glutamine ABC transporter, ATP-binding protein (GlnQ); IMG reference gene:2503957030; PFAM: ABC transporter; amino acid ABC transporter ATP-binding protein 867619..868359 Sphaerochaeta coccoides DSM 17374 10495041 YP_004411349.1 CDS Spico_0741 NC_015436.1 868551 870356 R COGs: COG5421 Transposase; InterPro IPR002559; KEGG: cob:COB47_1677 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; IMG reference gene:2503957031; PFAM: Transposase DDE domain; transposase IS4 family protein complement(868551..870356) Sphaerochaeta coccoides DSM 17374 10495042 YP_004411350.1 CDS Spico_0743 NC_015436.1 870748 871536 D COGs: COG0144 tRNA and rRNA cytosine-C5-methylase; InterPro IPR001678; KEGG: ssm:Spirs_2381 Fmu (Sun) domain protein; PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; SPTR: Fmu (Sun) domain protein; IMG reference gene:2503957033; PFAM: NOL1/NOP2/sun family; Fmu (Sun) domain-containing protein 870748..871536 Sphaerochaeta coccoides DSM 17374 10495044 YP_004411351.1 CDS Spico_0744 NC_015436.1 871557 873563 D COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR000212; KEGG: ssm:Spirs_2383 UvrD/REP helicase; PFAM: DNA helicase, UvrD/REP type; SPTR: ATP-dependent DNA helicase PcrA; IMG reference gene:2503957034; PFAM: UvrD/REP helicase; UvrD/REP helicase 871557..873563 Sphaerochaeta coccoides DSM 17374 10495045 YP_004411352.1 CDS Spico_0745 NC_015436.1 873717 873968 R KEGG: tgu:100218726 mitogen-activated protein kinase 6; SPTR: Mitogen-activated protein kinase 6; IMG reference gene:2503957035; hypothetical protein complement(873717..873968) Sphaerochaeta coccoides DSM 17374 10495046 YP_004411353.1 CDS Spico_0746 NC_015436.1 873973 874734 R COGs: COG1192 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: bhy:BHWA1_02684 plasmid partition protein; PFAM: Cobyrinic acid a,c-diamide synthase; SPTR: Plasmid partition protein; IMG reference gene:2503957036; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; Cobyrinic acid ac-diamide synthase complement(873973..874734) Sphaerochaeta coccoides DSM 17374 10495047 YP_004411354.1 CDS Spico_0747 NC_015436.1 875022 876356 R COGs: COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; InterPro IPR001360:IPR017736; KEGG: mrb:Mrub_0288 beta-galactosidase; PFAM: Glycoside hydrolase, family 1; PRIAM: Beta-glucosidase; SPTR: Beta-galactosidase; TIGRFAM: Glycoside hydrolase, family 1, beta-glucosidase; IMG reference gene:2503957037; PFAM: Glycosyl hydrolase 1; TIGRFAM: beta-galactosidase; broad-specificity cellobiase complement(875022..876356) Sphaerochaeta coccoides DSM 17374 10495048 YP_004411355.1 CDS Spico_0748 NC_015436.1 876578 877336 D COGs: COG0708 Exonuclease III; InterPro IPR005135:IPR000097:IPR004808; KEGG: aoe:Clos_2318 exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; PRIAM: Exodeoxyribonuclease III; SPTR: Exodeoxyribonuclease III Xth; TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; IMG reference gene:2503957038; PFAM: Endonuclease/Exonuclease/phosphatase; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth); exodeoxyribonuclease III 876578..877336 Sphaerochaeta coccoides DSM 17374 10495049 YP_004411356.1 CDS Spico_0749 NC_015436.1 877367 879202 R COGs: COG1217 membrane GTPase involved in stress response; InterProIPR000795:IPR004161:IPR000640:IPR005225:IPR 006298; KEGG: ssm:Spirs_3901 GTP-binding protein TypA; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; SMART: Translation elongation factor EFG/EF2, C-terminal; SPTR: GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein; IMG reference gene:2503957039; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain; GTP-binding protein TypA complement(877367..879202) Sphaerochaeta coccoides DSM 17374 10495050 YP_004411357.1 CDS Spico_0750 NC_015436.1 885244 885867 D InterPro IPR000182; KEGG: ret:RHE_CH01554 acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: acetyltransferase; IMG reference gene:2503957044; PFAM: Acetyltransferase (GNAT) family; N-acetyltransferase GCN5 885244..885867 Sphaerochaeta coccoides DSM 17374 10495055 YP_004411358.1 CDS Spico_0751 NC_015436.1 885935 886747 R COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: str:Sterm_0308 alpha/beta fold family hydrolase, PFAM: Alpha/beta hydrolase fold-1; SPTR: Alpha/beta hydrolase fold protein; IMG reference gene:2503957045; PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase complement(885935..886747) Sphaerochaeta coccoides DSM 17374 10495056 YP_004411359.1 CDS Spico_0752 NC_015436.1 886836 888518 R COGs: COG1236 exonuclease of the beta-lactamase fold involved in RNA processing; InterPro IPR001279:IPR011108; KEGG: cce:Ccel_1759 RNA-metabolising metallo-beta-lactamase; PFAM: Beta-lactamase-like; RNA-metabolising metallo-beta-lactamase; SMART: Beta-lactamase-like; SPTR: uncharacterized protein; IMG reference gene:2503957046; PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain; beta-lactamase domain-containing protein complement(886836..888518) Sphaerochaeta coccoides DSM 17374 10495057 YP_004411360.1 CDS Spico_0753 NC_015436.1 888558 889010 R COGs: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); InterPro IPR002178; KEGG: rba:RB8584 PTS system, fructose-specific enzyme II, BC component; PFAM: Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2; SPTR: PTS system, fructose-specific enzyme II, BC component; IMG reference gene:2503957047; PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN complement(888558..889010) Sphaerochaeta coccoides DSM 17374 10495058 YP_004411361.1 CDS Spico_0754 NC_015436.1 889023 889514 R InterPro IPR006016; KEGG: ssm:Spirs_3105 UspA domain protein; PFAM: UspA; SPTR: UspA domain protein; IMG reference gene:2503957048; PFAM: Universal stress protein family; UspA domain-containing protein complement(889023..889514) Sphaerochaeta coccoides DSM 17374 10495059 YP_004411362.1 CDS Spico_0755 NC_015436.1 889580 890227 R COGs: COG1394 H+-ATPase subunit D; HAMAP: ATPase, V1/A1 complex, subunit D; InterPro IPR002699; KEGG: ssm:Spirs_3106 V-type ATPase, D subunit; PFAM: ATPase, V1/A1 complex, subunit D; SPTR: V-type ATPase, D subunit; TIGRFAM: ATPase, V1/A1 complex, subunit D; IMG reference gene:2503957049; PFAM: ATP synthase subunit D; TIGRFAM: H(+)-transporting ATP synthase, vacuolar type, subunit D; V-type ATP synthase subunit D complement(889580..890227) Sphaerochaeta coccoides DSM 17374 10495060 YP_004411363.1 CDS Spico_0756 NC_015436.1 890231 891655 R COGs: COG1156 H+-ATPase subunit B; HAMAP: V-type ATP synthase regulatory subunit B/beta; InterPro IPR004100:IPR000194:IPR000793:IPR022879; KEGG: ssm:Spirs_3107 H+transporting two-sector ATPase alpha/beta subunit central region; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; SPTR: V-type ATP synthase beta chain 2; IMG reference gene:2503957050; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; V-type ATP synthase subunit beta complement(890231..891655) Sphaerochaeta coccoides DSM 17374 10495061 YP_004411364.1 CDS Spico_0757 NC_015436.1 891639 893450 R COGs: COG1155 H+-ATPase subunit A; HAMAP: V-type ATP synthase catalytic subunit A/alpha; InterProIPR004100:IPR000194:IPR000793:IPR022878:IPR 003593; KEGG: ssm:Spirs_3108 sodium-transporting two-sector ATPase; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: V-type ATP synthase alpha chain; IMG reference gene:2503957051; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; V-type ATP synthase subunit alpha complement(891639..893450) Sphaerochaeta coccoides DSM 17374 10495062 YP_004411365.1 CDS Spico_0758 NC_015436.1 893435 894082 R InterPro IPR002842; KEGG: ssm:Spirs_3109 H+transporting two-sector ATPase E subunit; PFAM: ATPase, V1/A1 complex, subunit E; SPTR: Vacuolar H+-ATPase E subunit; IMG reference gene:2503957052; PFAM: ATP synthase (E/31 kDa) subunit; H+transporting two-sector ATPase E subunit complement(893435..894082) Sphaerochaeta coccoides DSM 17374 10495063 YP_004411366.1 CDS Spico_0759 NC_015436.1 894079 894381 R COGs: COG1436 H+-ATPase subunit F; InterPro IPR008218; KEGG: ssm:Spirs_3110 vacuolar H+transporting two-sector ATPase F subunit; PFAM: ATPase, V1/A1 complex, subunit F; SPTR: A1A0 archaeal ATP synthase subunit F AhaF; IMG reference gene:2503957053; PFAM: ATP synthase (F/14-kDa) subunit; Vacuolar H+transporting two-sector ATPase F subunit complement(894079..894381) Sphaerochaeta coccoides DSM 17374 10495064 YP_004411367.1 CDS Spico_0760 NC_015436.1 894394 894756 R InterPro IPR002379; KEGG: ssm:Spirs_3111 H+transporting two-sector ATPase C subunit; PFAM: ATPase, F0/V0 complex, subunit C; SPTR: V-ATPase F-subunit; IMG reference gene:2503957054; PFAM: ATP synthase subunit C; H+transporting two-sector ATPase subunit C complement(894394..894756) Sphaerochaeta coccoides DSM 17374 10495065 YP_004411368.1 CDS Spico_0761 NC_015436.1 894788 896767 R COGs: COG1269 H+-ATPase subunit I; InterPro IPR002490; KEGG: ssm:Spirs_3112 V-type ATPase 116 kDa subunit; PFAM: ATPase, V0/A0 complex, 116kDa subunit; SPTR: V-type sodium ATP synthase subunit I; IMG reference gene:2503957055; PFAM: V-type ATPase 116kDa subunit family; V-type ATPase 116 kDa subunit complement(894788..896767) Sphaerochaeta coccoides DSM 17374 10495066 YP_004411369.1 CDS Spico_0762 NC_015436.1 896764 897894 R COGs: COG1527 H+-ATPase subunit C; InterPro IPR002843; KEGG: ssm:Spirs_3113 H+transporting two-sector ATPase C (AC39) subunit; PFAM: ATPase, V0/A0 complex, subunit C/D; SPTR: H(+)-transporting two-sector ATPase; IMG reference gene:2503957056; PFAM: ATP synthase (C/AC39) subunit; H+transporting two-sector ATPase C (AC39) subunit complement(896764..897894) Sphaerochaeta coccoides DSM 17374 10495067 YP_004411370.1 CDS Spico_0763 NC_015436.1 897891 898250 R KEGG: sna:Snas_1610 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957057; hypothetical protein complement(897891..898250) Sphaerochaeta coccoides DSM 17374 10495068 YP_004411371.1 CDS Spico_0764 NC_015436.1 898478 899674 R COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR001959:IPR010095; KEGG: xfm:Xfasm12_1563 transposase OrfB; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal; SPTR: Transposase OrfB; TIGRFAM: Transposase, IS605 OrfB, C-terminal; IMG reference gene:2503957058; PFAM: Helix-turn-helix domain; transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region; transposase, IS605 OrfB family complement(898478..899674) Sphaerochaeta coccoides DSM 17374 10495069 YP_004411372.1 CDS Spico_0765 NC_015436.1 899668 900291 R COGs: COG2452 site-specific integrase-resolvase; InterPro IPR000551:IPR006119; KEGG: xfm:Xfasm12_1564 hypothetical protein; PFAM: Resolvase, N-terminal; HTH transcriptional regulator, MerR; SMART: Resolvase, N-terminal; SPTR: uncharacterized protein; IMG reference gene:2503957059; PFAM: MerR family regulatory protein; Resolvase, N terminal domain; resolvase domain-containing protein complement(899668..900291) Sphaerochaeta coccoides DSM 17374 10495070 YP_004411373.1 CDS Spico_0766 NC_015436.1 900602 900820 D KEGG: bcb:BCB4264_A3629 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957060; hypothetical protein 900602..900820 Sphaerochaeta coccoides DSM 17374 10495071 YP_004411374.1 CDS Spico_0767 NC_015436.1 900810 901490 D COGs: COG2184 Protein involved in cell division; InterPro IPR003812; KEGG: ajs:Ajs_4242 filamentation induced by cAMP protein Fic; PFAM: Filamentation induced by cAMP/death on curing-related; SPTR: Filamentation induced by cAMP protein Fic; IMG reference gene:2503957061; PFAM: Fic/DOC family; Fic family protein 900810..901490 Sphaerochaeta coccoides DSM 17374 10495072 YP_004411375.1 CDS Spico_0768 NC_015436.1 901852 903519 D COGs: COG0366 Glycosidase; InterPro IPR006047:IPR006589; KEGG: csc:Csac_2428 alpha amylase, catalytic region; PFAM: Glycosyl hydrolase, family 13, catalytic domain; PRIAM: Oligo-1,6-glucosidase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; SPTR: Alpha amylase, catalytic region; IMG reference gene:2503957063; PFAM: Alpha amylase, catalytic domain; oligo-1,6-glucosidase 901852..903519 Sphaerochaeta coccoides DSM 17374 10495074 YP_004411376.1 CDS Spico_0769 NC_015436.1 903516 905858 D COGs: COG3345 Alpha-galactosidase; InterPro IPR000111; KEGG: cpy:Cphy_1936 glycoside hydrolase clan GH-D; PFAM: Glycoside hydrolase, clan GH-D; PRIAM: Alpha-galactosidase; SPTR: Glycoside hydrolase clan GH-D; IMG reference gene:2503957064; PFAM: Melibiase; alpha-galactosidase 903516..905858 Sphaerochaeta coccoides DSM 17374 10495075 YP_004411377.1 CDS Spico_0770 NC_015436.1 905954 907303 D COGs: COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; InterPro IPR001360; KEGG: cpy:Cphy_1937 glycoside hydrolase; PFAM: Glycoside hydrolase, family 1; PRIAM: Beta-glucosidase; SPTR: Glycoside hydrolase 1; IMG reference gene:2503957065; PFAM: Glycosyl hydrolase 1; Beta-glucosidase 905954..907303 Sphaerochaeta coccoides DSM 17374 10495076 YP_004411378.1 CDS Spico_0771 NC_015436.1 907296 908696 D COGs: COG2211 Na+/melibiose symporter and related transporter; InterPro IPR011701:IPR001927; KEGG: cpy:Cphy_1935 sugar (glycoside-pentoside-hexuronide) transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Sugar (Glycoside-Pentoside-Hexuronide) transporter; TIGRFAM: Sodium:galactoside symporter; IMG reference gene:2503957066; TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; sugar (Glycoside-Pentoside-Hexuronide) transporter 907296..908696 Sphaerochaeta coccoides DSM 17374 10495077 YP_004411379.1 CDS Spico_0772 NC_015436.1 908870 909616 D COGs: COG1296 branched-chain amino acid permease (azaleucine resistance); InterPro IPR011606; KEGG: gwc:GWCH70_0661 AzlC family protein; PFAM: Branched-chain amino acid transport, permease; SPTR: AzlC family protein; IMG reference gene:2503957067; PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC; AzlC family protein 908870..909616 Sphaerochaeta coccoides DSM 17374 10495078 YP_004411380.1 CDS Spico_0773 NC_015436.1 909607 909930 D InterPro IPR008407; KEGG: bse:Bsel_1519 branched-chain amino acid transport; PFAM: Branched-chain amino acid transport, AzlD; SPTR: uncharacterized protein; IMG reference gene:2503957068; PFAM: Branched-chain amino acid transport protein (AzlD); branched-chain amino acid transport 909607..909930 Sphaerochaeta coccoides DSM 17374 10495079 YP_004411381.1 CDS Spico_0774 NC_015436.1 909981 910643 R KEGG: fbc:FB2170_04545 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957069; hypothetical protein complement(909981..910643) Sphaerochaeta coccoides DSM 17374 10495080 YP_004411382.1 CDS Spico_0775 NC_015436.1 910806 911423 R KEGG: paa:Paes_0399 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957070; hypothetical protein complement(910806..911423) Sphaerochaeta coccoides DSM 17374 10495081 YP_004411383.1 CDS Spico_0776 NC_015436.1 911770 912201 R COGs: COG0824 thioesterase; InterPro IPR006683:IPR006684; KEGG: asu:Asuc_1795 Pol-Pal system-associated acyl-CoA thioesterase; PFAM: Thioesterase superfamily; SPTR: Pol-Pal system-associated acyl-CoA thioesterase; TIGRFAM: 4-hydroxybenzoyl-CoA thioesterase; IMG reference gene:2503957071; PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; tol-pal system-associated acyl-CoA thioesterase; 4-hydroxybenzoyl-CoA thioesterase complement(911770..912201) Sphaerochaeta coccoides DSM 17374 10495082 YP_004411384.1 CDS Spico_0777 NC_015436.1 912202 913470 R COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR022644:IPR022643; KEGG: ssm:Spirs_1460 Orn/DAP/Arg decarboxylase 2; PFAM: Orn/DAP/Arg decarboxylase 2, C-terminal; Orn/DAP/Arg decarboxylase 2, N-terminal; PRIAM: Diaminopimelate decarboxylase; SPTR: Diaminopimelate decarboxylase; IMG reference gene:2503957072; PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase; diaminopimelate decarboxylase complement(912202..913470) Sphaerochaeta coccoides DSM 17374 10495083 YP_004411385.1 CDS Spico_0778 NC_015436.1 913467 914708 R COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; HAMAP: LL-diaminopimelate aminotransferase; InterPro IPR004839:IPR019942; KEGG: ssm:Spirs_1461 LL-diaminopimelate aminotransferase; PFAM: Aminotransferase, class I/classII; PRIAM: LL-diaminopimelate aminotransferase; SPTR: LL-diaminopimelate aminotransferase; TIGRFAM: LL-diaminopimelate aminotransferase, plant-related; IMG reference gene:2503957073; PFAM: Aminotransferase class I and II; TIGRFAM: LL-diaminopimelate aminotransferase; LL-diaminopimelate aminotransferase apoenzyme complement(913467..914708) Sphaerochaeta coccoides DSM 17374 10495084 YP_004411386.1 CDS Spico_0779 NC_015436.1 914828 915742 R COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; HAMAP: Dihydrodipicolinate synthase; InterPro IPR002220:IPR005263; KEGG: ssm:Spirs_1462 dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase; SPTR: Dihydrodipicolinate synthase; TIGRFAM: Dihydrodipicolinate synthase subfamily; IMG reference gene:2503957074; PFAM: Dihydrodipicolinate synthetase; TIGRFAM: dihydrodipicolinate synthase; dihydrodipicolinate synthase complement(914828..915742) Sphaerochaeta coccoides DSM 17374 10495085 YP_004411387.1 CDS Spico_0780 NC_015436.1 915786 916532 R COGs: COG0289 Dihydrodipicolinate reductase; HAMAP: Dihydrodipicolinate reductase, bacterial/plant; InterPro IPR000846:IPR022663:IPR011770; KEGG: sta:STHERM_c08680 dihydrodipicolinate reductase; PFAM: Dihydrodipicolinate reductase, N-terminal; Dihydrodipicolinate reductase, C-terminal; PRIAM: Dihydrodipicolinate reductase; SPTR: Dihydrodipicolinate reductase; TIGRFAM: Dihydrodipicolinate reductase, bacterial/plant; IMG reference gene:2503957075; PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase; Dihydrodipicolinate reductase complement(915786..916532) Sphaerochaeta coccoides DSM 17374 10495086 YP_004411388.1 CDS Spico_0781 NC_015436.1 916689 919214 R COGs: COG0550 Topoisomerase IA; InterProIPR006171:IPR013497:IPR003601:IPR003602:IPR 005738; KEGG: dhd:Dhaf_4786 DNA topoisomerase III; PFAM: DNA topoisomerase, type IA, central; Toprim domain; PRIAM: DNA topoisomerase; SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain; SPTR: DNA topoisomerase; TIGRFAM: DNA topoisomerase III, bacterial-type; IMG reference gene:2503957076; PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase III, bacteria and conjugative plasmid; DNA topoisomerase III complement(916689..919214) Sphaerochaeta coccoides DSM 17374 10495087 YP_004411389.1 CDS Spico_0782 NC_015436.1 919491 919658 D InterPro IPR001450; KEGG: fma:FMG_1124 ferredoxin; PFAM: 4Fe-4S binding domain; SPTR: Conserved domain protein; manually curated; IMG reference gene:2503957077; PFAM: 4Fe-4S binding domain; 4Fe-4S ferredoxin 919491..919658 Sphaerochaeta coccoides DSM 17374 10495088 YP_004411390.1 CDS Spico_0783 NC_015436.1 919837 921051 D COGs: COG1570 Exonuclease VII large subunit; HAMAP: Exonuclease VII, large subunit; InterPro IPR004365:IPR020579:IPR003753; KEGG: ssm:Spirs_1343 exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; PRIAM: Exodeoxyribonuclease VII; SPTR: Exodeoxyribonuclease 7 large subunit; TIGRFAM: Exonuclease VII, large subunit; IMG reference gene:2503957078; PFAM: Exonuclease VII, large subunit; OB-fold nucleic acid binding domain; TIGRFAM: exodeoxyribonuclease VII, large subunit; exodeoxyribonuclease 7 large subunit 919837..921051 Sphaerochaeta coccoides DSM 17374 10495089 YP_004411391.1 CDS Spico_0784 NC_015436.1 921048 921287 D HAMAP: Exonuclease VII, small subunit; InterPro IPR003761; KEGG: sta:STHERM_c09580 hypothetical protein; PFAM: Exonuclease VII, small subunit; SPTR: uncharacterized protein; IMG reference gene:2503957079; PFAM: Exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; exodeoxyribonuclease 7 small subunit 921048..921287 Sphaerochaeta coccoides DSM 17374 10495090 YP_004411392.1 CDS Spico_0785 NC_015436.1 921288 921872 D COGs: COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; InterPro IPR002818; KEGG: clj:CLJU_c17590 intracellular protease/amidase related enzyme,ThiJ family; PFAM: ThiJ/PfpI; SPTR: DJ-1/PfpI family protein; IMG reference gene:2503957080; PFAM: DJ-1/PfpI family; ThiJ/PfpI domain-containing protein 921288..921872 Sphaerochaeta coccoides DSM 17374 10495091 YP_004411393.1 CDS Spico_0786 NC_015436.1 922035 923138 R COGs: COG2309 Leucyl aminopeptidase (aminopeptidase T); KEGG: ssm:Spirs_1009 peptidase M29 aminopeptidase II; SPTR: Peptidase M29 aminopeptidase II; IMG reference gene:2503957081; PFAM: Thermophilic metalloprotease (M29); peptidase M29 aminopeptidase II complement(922035..923138) Sphaerochaeta coccoides DSM 17374 10495092 YP_004411394.1 CDS Spico_0787 NC_015436.1 923192 923962 R COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: tde:TDE1083 RNA pseudouridylate synthase; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Pseudouridine synthase; IMG reference gene:2503957082; PFAM: RNA pseudouridylate synthase; pseudouridine synthase complement(923192..923962) Sphaerochaeta coccoides DSM 17374 10495093 YP_004411395.1 CDS Spico_0788 NC_015436.1 924363 926447 D COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR000408; KEGG: ttm:Tthe_2617 S-layer domain protein; PFAM: Regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; IMG reference gene:2503957083; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 924363..926447 Sphaerochaeta coccoides DSM 17374 10495094 YP_004411396.1 CDS Spico_0789 NC_015436.1 926546 927256 R COGs: COG0670 Integral membrane protein interacts with FtsH; InterPro IPR006214; KEGG: ssm:Spirs_1304 protein of unknown function UPF0005; PFAM: Inhibitor of apoptosis-promoting Bax1-related; SPTR: uncharacterized protein; IMG reference gene:2503957084; PFAM: Uncharacterised protein family UPF0005; hypothetical protein complement(926546..927256) Sphaerochaeta coccoides DSM 17374 10495095 YP_004411397.1 CDS Spico_0790 NC_015436.1 927463 928233 D KEGG: srt:Srot_2429 ABC transporter-like protein; SPTR: ABC transporter related protein; IMG reference gene:2503957085; hypothetical protein 927463..928233 Sphaerochaeta coccoides DSM 17374 10495096 YP_004411398.1 CDS Spico_0791 NC_015436.1 928254 930545 D COGs: COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase; InterPro IPR003959:IPR003593; KEGG: ssm:Spirs_1297 AAA ATPase central domain protein; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; SPTR: ATPase, AAA family; IMG reference gene:2503957086; PFAM: MgsA AAA+ ATPase C terminal; Holliday junction DNA helicase ruvB N-terminus; recombination protein MgsA 928254..930545 Sphaerochaeta coccoides DSM 17374 10495097 YP_004411399.1 CDS Spico_0792 NC_015436.1 931623 932981 D COGs: COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); HAMAP: Trigger factor; InterPro IPR008881:IPR001179:IPR008880:IPR005215; KEGG: ssm:Spirs_1296 trigger factor; PFAM: Trigger factor, ribosome-binding, bacterial; Peptidyl-prolyl cis-trans isomerase, FKBP-type; Trigger factor, C-terminal, bacterial; SPTR: Trigger factor; TIGRFAM: Trigger factor; IMG reference gene:2503957092; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Bacterial trigger factor protein (TF) C-terminus; Bacterial trigger factor protein (TF); TIGRFAM: trigger factor; trigger factor Tig 931623..932981 Sphaerochaeta coccoides DSM 17374 10495103 YP_004411400.1 CDS Spico_0793 NC_015436.1 933046 933648 D COGs: COG0740 Protease subunit of ATP-dependent Clp protease; HAMAP: Peptidase S14, ClpP; InterPro IPR001907; KEGG: ssm:Spirs_1295 ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: Peptidase S14, ClpP; PRIAM: Endopeptidase Clp; SPTR: ATP-dependent Clp protease proteolytic subunit; IMG reference gene:2503957093; PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; ATP-dependent Clp protease proteolytic subunit 933046..933648 Sphaerochaeta coccoides DSM 17374 10495104 YP_004411401.1 CDS Spico_0794 NC_015436.1 933651 934883 D COGs: COG1219 ATP-dependent protease Clp ATPase subunit; HAMAP: Clp protease, ATP-binding subunit ClpX; InterProIPR010603:IPR013093:IPR019489:IPR004487:IPR 003593; KEGG: ssm:Spirs_1294 ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase, AAA-2; Zinc finger, C4-type; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: ATP-dependent Clp protease ATP-binding subunit ClpX; TIGRFAM: Clp protease, ATP-binding subunit ClpX; IMG reference gene:2503957094; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX); ATP-dependent Clp protease ATP-binding subunit ClpX 933651..934883 Sphaerochaeta coccoides DSM 17374 10495105 YP_004411402.1 CDS Spico_0795 NC_015436.1 934885 935868 D COGs: COG0618 Exopolyphosphatase-related protein; InterPro IPR001667:IPR003156; KEGG: tde:TDE1479 DHH superfamily protein, subfamily 1; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; SPTR: DHH superfamily protein, subfamily 1; IMG reference gene:2503957095; PFAM: DHH family; DHHA1 domain; phosphoesterase RecJ domain-containing protein 934885..935868 Sphaerochaeta coccoides DSM 17374 10495106 YP_004411403.1 CDS Spico_0796 NC_015436.1 936011 937228 D KEGG: ssm:Spirs_1290 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957096; hypothetical protein 936011..937228 Sphaerochaeta coccoides DSM 17374 10495107 YP_004411404.1 CDS Spico_0797 NC_015436.1 937221 937916 D COGs: COG0127 Xanthosine triphosphate pyrophosphatase; HAMAP: Nucleoside-triphosphatase; InterPro IPR002637:IPR020922; KEGG: ssm:Spirs_1289 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; PFAM: Ham1-like protein; PRIAM: Nucleoside-triphosphatase; SPTR: Nucleoside-triphosphatase; IMG reference gene:2503957097; PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; nucleoside-triphosphatase rdgB 937221..937916 Sphaerochaeta coccoides DSM 17374 10495108 YP_004411405.1 CDS Spico_0798 NC_015436.1 937891 939693 D COGs: COG1164 Oligoendopeptidase F; InterPro IPR013647:IPR001567:IPR004438; KEGG: ssm:Spirs_1288 oligoendopeptidase F; PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F; Peptidase M3B, oligopeptidase F, N-terminal; SPTR: Oligoendopeptidase F; TIGRFAM: Peptidase M3B, oligoendopeptidase F; IMG reference gene:2503957098; PFAM: Oligopeptidase F; Peptidase M3; TIGRFAM: oligoendopeptidase F; oligopeptidase F 937891..939693 Sphaerochaeta coccoides DSM 17374 10495109 YP_004411406.1 CDS Spico_0799 NC_015436.1 940376 940579 D KEGG: bay:RBAM_016980 BaeJ; SPTR: BaeJ; IMG reference gene:2503957100; hypothetical protein 940376..940579 Sphaerochaeta coccoides DSM 17374 10495111 YP_004411407.1 CDS Spico_0800 NC_015436.1 940626 940748 R IMG reference gene:2503957101; hypothetical protein complement(940626..940748) Sphaerochaeta coccoides DSM 17374 10495112 YP_004411408.1 CDS Spico_0801 NC_015436.1 941313 941435 R IMG reference gene:2503957102; hypothetical protein complement(941313..941435) Sphaerochaeta coccoides DSM 17374 10495113 YP_004411409.1 CDS Spico_0802 NC_015436.1 941628 942479 R KEGG: afv:AFLA_136820 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957103; hypothetical protein complement(941628..942479) Sphaerochaeta coccoides DSM 17374 10495114 YP_004411410.1 CDS Spico_0803 NC_015436.1 942495 942974 R KEGG: ath:AT2G32240 hypothetical protein; SPTR: Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x; IMG reference gene:2503957104; hypothetical protein complement(942495..942974) Sphaerochaeta coccoides DSM 17374 10495115 YP_004411411.1 CDS Spico_0804 NC_015436.1 942983 947212 R InterPro IPR008160; KEGG: spv:SPH_0115 phage minor structural protein; PFAM: Collagen triple helix repeat; SPTR: Phage minor structural protein; IMG reference gene:2503957105; PFAM: Collagen triple helix repeat (20 copies); collagen triple helix repeat-containing protein complement(942983..947212) Sphaerochaeta coccoides DSM 17374 10495116 YP_004411412.1 CDS Spico_0805 NC_015436.1 947214 950093 R KEGG: rce:RC1_0084 phage tail tape measure protein, SPTR: Phage tail tape measure protein, ; IMG reference gene:2503957106; hypothetical protein complement(947214..950093) Sphaerochaeta coccoides DSM 17374 10495117 YP_004411413.1 CDS Spico_0806 NC_015436.1 950147 950398 R IMG reference gene:2503957107; hypothetical protein complement(950147..950398) Sphaerochaeta coccoides DSM 17374 10495118 YP_004411414.1 CDS Spico_0807 NC_015436.1 950419 950820 R KEGG: smf:Smon_0099 cell division protein FtsZ; SPTR: Cell division protein ftsZ; IMG reference gene:2503957108; hypothetical protein complement(950419..950820) Sphaerochaeta coccoides DSM 17374 10495119 YP_004411415.1 CDS Spico_0808 NC_015436.1 950780 951031 R KEGG: cim:CIMG_07117 hypothetical protein; SPTR: ribose-phosphate pyrophosphokinase; IMG reference gene:2503957109; hypothetical protein complement(950780..951031) Sphaerochaeta coccoides DSM 17374 10495120 YP_004411416.1 CDS Spico_0809 NC_015436.1 951028 951729 R KEGG: cai:Caci_5320 amidohydrolase 3; SPTR: Amidohydrolase 3; IMG reference gene:2503957110; hypothetical protein complement(951028..951729) Sphaerochaeta coccoides DSM 17374 10495121 YP_004411417.1 CDS Spico_0810 NC_015436.1 951732 952196 R KEGG: ecb:100051325 similar to Signal recognition particle 68 kDa protein (SRP68); SPTR: Uncharacterized protein; IMG reference gene:2503957111; hypothetical protein complement(951732..952196) Sphaerochaeta coccoides DSM 17374 10495122 YP_004411418.1 CDS Spico_0811 NC_015436.1 952193 952783 R KEGG: avi:Avi_2997 Mu-like prophage protein; SPTR: uncharacterized protein; IMG reference gene:2503957112; PFAM: Phage virion morphogenesis family; hypothetical protein complement(952193..952783) Sphaerochaeta coccoides DSM 17374 10495123 YP_004411419.1 CDS Spico_0812 NC_015436.1 952755 953183 R KEGG: dap:Dacet_2235 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957113; hypothetical protein complement(952755..953183) Sphaerochaeta coccoides DSM 17374 10495124 YP_004411420.1 CDS Spico_0813 NC_015436.1 953195 954433 R KEGG: dde:Dde_3377 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957114; hypothetical protein complement(953195..954433) Sphaerochaeta coccoides DSM 17374 10495125 YP_004411421.1 CDS Spico_0814 NC_015436.1 954501 954848 R KEGG: dap:Dacet_2233 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957115; hypothetical protein complement(954501..954848) Sphaerochaeta coccoides DSM 17374 10495126 YP_004411422.1 CDS Spico_0816 NC_015436.1 956085 957362 R InterPro IPR006528; KEGG: mrb:Mrub_1967 phage head morphogenesis protein, SPP1 gp7 family; PFAM: Phage head morphogenesis protein, SPP1 gp7; SPTR: Virion morphogenesis protein; TIGRFAM: Phage head morphogenesis protein, SPP1 gp7; IMG reference gene:2503957117; PFAM: Phage Mu protein F like protein; TIGRFAM: phage head morphogenesis protein, SPP1 gp7 family; phage head morphogenesis protein complement(956085..957362) Sphaerochaeta coccoides DSM 17374 10495128 YP_004411423.1 CDS Spico_0817 NC_015436.1 957539 958810 R COGs: COG4383 Mu-like prophage protein gp29; InterPro IPR009279; KEGG: dap:Dacet_2219 hypothetical protein; PFAM: Protein of unknown function DUF935; SPTR: uncharacterized protein; IMG reference gene:2503957118; PFAM: Protein of unknown function (DUF935); hypothetical protein complement(957539..958810) Sphaerochaeta coccoides DSM 17374 10495129 YP_004411424.1 CDS Spico_0818 NC_015436.1 958803 960428 R KEGG: hth:HTH_0882 phage uncharacterized protein; SPTR: Phage uncharacterized protein; IMG reference gene:2503957119; PFAM: Terminase-like family; phage protein complement(958803..960428) Sphaerochaeta coccoides DSM 17374 10495130 YP_004411425.1 CDS Spico_0819 NC_015436.1 960418 960945 R KEGG: amt:Amet_1950 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957120; PFAM: Protein of unknown function (DUF3486); hypothetical protein complement(960418..960945) Sphaerochaeta coccoides DSM 17374 10495131 YP_004411426.1 CDS Spico_0820 NC_015436.1 960947 961249 R KEGG: hth:HTH_0884 hypothetical protein; SPTR: Predicted protein; IMG reference gene:2503957121; hypothetical protein complement(960947..961249) Sphaerochaeta coccoides DSM 17374 10495132 YP_004411427.1 CDS Spico_0821 NC_015436.1 961246 961611 R KEGG: dtu:Dtur_1626 SMC domain protein; SPTR: SMC domain protein; IMG reference gene:2503957122; hypothetical protein complement(961246..961611) Sphaerochaeta coccoides DSM 17374 10495133 YP_004411428.1 CDS Spico_0822 NC_015436.1 961690 961986 R KEGG: tel:tll0573 porin; major outer membrane protein; SPTR: Tll0573 protein; IMG reference gene:2503957123; hypothetical protein complement(961690..961986) Sphaerochaeta coccoides DSM 17374 10495134 YP_004411429.1 CDS Spico_0823 NC_015436.1 962224 962547 R KEGG: hch:HCH_02233 cell wall biosynthesis glycosyltransferase; SPTR: Glycosyltransferase involved in cell wall biogenesis; IMG reference gene:2503957124; hypothetical protein complement(962224..962547) Sphaerochaeta coccoides DSM 17374 10495135 YP_004411430.1 CDS Spico_0824 NC_015436.1 962693 963259 D KEGG: emi:Emin_1453 phage-related protein; SPTR: phage-related protein; IMG reference gene:2503957125; hypothetical protein 962693..963259 Sphaerochaeta coccoides DSM 17374 10495136 YP_004411431.1 CDS Spico_0825 NC_015436.1 963306 964334 R KEGG: zpr:ZPR_0434 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957126; hypothetical protein complement(963306..964334) Sphaerochaeta coccoides DSM 17374 10495137 YP_004411432.1 CDS Spico_0826 NC_015436.1 964418 964771 R KEGG: dre:550523 zgc:110200; SPTR: Non-LEE encoded type III effector C; IMG reference gene:2503957127; hypothetical protein complement(964418..964771) Sphaerochaeta coccoides DSM 17374 10495138 YP_004411433.1 CDS Spico_0827 NC_015436.1 964713 965045 R KEGG: pth:PTH_2540 phosphoribosylamine-glycine ligase; SPTR: Phosphoribosylamine-glycine ligase; IMG reference gene:2503957128; hypothetical protein complement(964713..965045) Sphaerochaeta coccoides DSM 17374 10495139 YP_004411434.1 CDS Spico_0828 NC_015436.1 965129 965827 R COGs: COG2932 transcriptional regulator protein; InterPro IPR001387:IPR019759; KEGG: lhk:LHK_01994 transcriptional regulator; PFAM: Helix-turn-helix type 3; Peptidase S24/S26A/S26B, conserved region; SMART: Helix-turn-helix type 3; SPTR: transcriptional repressor protein; IMG reference gene:2503957129; PFAM: Helix-turn-helix; Peptidase S24-like; phage repressor complement(965129..965827) Sphaerochaeta coccoides DSM 17374 10495140 YP_004411435.1 CDS Spico_0829 NC_015436.1 965967 966698 D KEGG: pzu:PHZ_c1565 predicted endonuclease containing a URI domain; SPTR: Predicted endonuclease containing a URI domain; IMG reference gene:2503957130; hypothetical protein 965967..966698 Sphaerochaeta coccoides DSM 17374 10495141 YP_004411436.1 CDS Spico_0830 NC_015436.1 966699 967010 D KEGG: pyo:PY04213 hypothetical protein; SPTR: Death-inducer obliterator 1; IMG reference gene:2503957131; hypothetical protein 966699..967010 Sphaerochaeta coccoides DSM 17374 10495142 YP_004411437.1 CDS Spico_0831 NC_015436.1 966960 967316 R KEGG: ape:APE_0946 succinate dehydrogenase iron-sulfur subunit; SPTR: Succinate dehydrogenase subunit B; IMG reference gene:2503957132; hypothetical protein complement(966960..967316) Sphaerochaeta coccoides DSM 17374 10495143 YP_004411438.1 CDS Spico_0832 NC_015436.1 967440 967724 D InterPro IPR001387; KEGG: bfs:BF3179 DNA-binding protein; PFAM: Helix-turn-helix type 3; SPTR: uncharacterized protein; IMG reference gene:2503957133; PFAM: Helix-turn-helix; helix-turn-helix domain-containing protein 967440..967724 Sphaerochaeta coccoides DSM 17374 10495144 YP_004411439.1 CDS Spico_0833 NC_015436.1 967724 969826 D KEGG: dbr:Deba_1609 integrase catalytic region; SPTR: uncharacterized protein; IMG reference gene:2503957134; PFAM: Bacteriophage Mu transposase; hypothetical protein 967724..969826 Sphaerochaeta coccoides DSM 17374 10495145 YP_004411440.1 CDS Spico_0834 NC_015436.1 969823 970746 D COGs: COG2842 Uncharacterized ATPase transposase; KEGG: dde:Dde_3351 bacteriophage DNA transposition B protein; SPTR: uncharacterized protein; IMG reference gene:2503957135; hypothetical protein 969823..970746 Sphaerochaeta coccoides DSM 17374 10495146 YP_004411441.1 CDS Spico_0835 NC_015436.1 970721 971182 D KEGG: dde:Dde_3352 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957136; hypothetical protein 970721..971182 Sphaerochaeta coccoides DSM 17374 10495147 YP_004411442.1 CDS Spico_0836 NC_015436.1 971179 971667 D KEGG: rce:RC1_1103 GemA, modulation of host genes; SPTR: uncharacterized protein; IMG reference gene:2503957137; PFAM: Protein of unknown function (DUF1018); hypothetical protein 971179..971667 Sphaerochaeta coccoides DSM 17374 10495148 YP_004411443.1 CDS Spico_0837 NC_015436.1 971664 972281 D KEGG: aat:D11S_0001 sulfate transport protein CysZ; SPTR: sulfate transport protein CysZ; IMG reference gene:2503957138; PFAM: Protein of unknown function (DUF3164); sulfate transport protein CysZ 971664..972281 Sphaerochaeta coccoides DSM 17374 10495149 YP_004411444.1 CDS Spico_0838 NC_015436.1 972295 972894 D KEGG: ctc:CTC02237 hypothetical protein; SPTR: Conserved protein; IMG reference gene:2503957139; hypothetical protein 972295..972894 Sphaerochaeta coccoides DSM 17374 10495150 YP_004411445.1 CDS Spico_0839 NC_015436.1 972954 973211 D KEGG: sbi:SORBI_04g009980 hypothetical protein; SPTR: Lantibiotic mersacidin modifying enzyme; IMG reference gene:2503957140; hypothetical protein 972954..973211 Sphaerochaeta coccoides DSM 17374 10495151 YP_004411446.1 CDS Spico_0840 NC_015436.1 973769 973951 D KEGG: cpy:Cphy_3624 hypothetical protein; SPTR: bacteriophage-related protein; IMG reference gene:2503957141; hypothetical protein 973769..973951 Sphaerochaeta coccoides DSM 17374 10495152 YP_004411447.1 CDS Spico_0841 NC_015436.1 974079 974645 R InterPro IPR002104; KEGG: ssm:Spirs_R0031 integrase; PFAM: Integrase, catalytic core, phage; SPTR: Tn554-related transposase B; IMG reference gene:2503957142; PFAM: Phage integrase; integrase complement(974079..974645) Sphaerochaeta coccoides DSM 17374 10495153 YP_004411448.1 CDS Spico_0842 NC_015436.1 974929 975384 R InterPro IPR004360; KEGG: str:Sterm_2228 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase; IMG reference gene:2503957144; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; Glyoxalase/bleomycin resistance protein/dioxygenase complement(974929..975384) Sphaerochaeta coccoides DSM 17374 10495155 YP_004411449.1 CDS Spico_0843 NC_015436.1 975665 976339 D COGs: COG0177 EndoIII-related endonuclease; InterPro IPR003265:IPR003651; KEGG: sta:STHERM_c20610 endonuclease III; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SMART: HhH-GPD domain; SPTR: Endonuclease III; IMG reference gene:2503957146; PFAM: HhH-GPD superfamily base excision DNA repair protein; Iron-sulfur binding domain of endonuclease III; Helix-hairpin-helix motif; TIGRFAM: endonuclease III; DNA-(apurinic or apyrimidinic site) lyase 975665..976339 Sphaerochaeta coccoides DSM 17374 10495157 YP_004411450.1 CDS Spico_0844 NC_015436.1 976364 976777 R KEGG: ckr:CKR_1799 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957147; hypothetical protein complement(976364..976777) Sphaerochaeta coccoides DSM 17374 10495158 YP_004411451.1 CDS Spico_0845 NC_015436.1 976875 977441 R COGs: COG0602 Organic radical activating protein; InterPro IPR007197:IPR012837; KEGG: dhd:Dhaf_0350 anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM; SPTR: Anaerobic ribonucleoside-triphosphate reductase-activating protein; TIGRFAM: Ribonucleoside-triphosphate reductase activating, anaerobic; IMG reference gene:2503957148; PFAM: Radical SAM superfamily; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; anaerobic ribonucleoside-triphosphate reductase activating protein complement(976875..977441) Sphaerochaeta coccoides DSM 17374 10495159 YP_004411452.1 CDS Spico_0846 NC_015436.1 977451 979808 R COGs: COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase; InterPro IPR005144:IPR012833; KEGG: aoe:Clos_1144 anaerobic ribonucleoside triphosphate reductase; PFAM: ATP-cone; PRIAM: Ribonucleoside-triphosphate reductase; SPTR: Anaerobic ribonucleoside-triphosphate reductase; TIGRFAM: Ribonucleoside-triphosphate reductase, anaerobic; IMG reference gene:2503957149; PFAM: ATP cone domain; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; ribonucleoside-triphosphate reductase class III catalytic subunit complement(977451..979808) Sphaerochaeta coccoides DSM 17374 10495160 YP_004411453.1 CDS Spico_0847 NC_015436.1 980368 981516 D COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003439:IPR013611:IPR003593:IPR005893; KEGG: tpp:TPASS_0652 spermidine/putrescine ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; Transport-associated OB, type 2; PRIAM: Polyamine-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Spermidine/putrescine import ATP-binding protein PotA; TIGRFAM: Spermidine/putrescine ABC transporter ATP-binding subunit; IMG reference gene:2503957150; PFAM: ABC transporter; TOBE domain; TIGRFAM: spermidine/putrescine ABC transporter ATP-binding subunit; spermidine/putrescine ABC transporter ATPase 980368..981516 Sphaerochaeta coccoides DSM 17374 10495161 YP_004411454.1 CDS Spico_0848 NC_015436.1 981513 982451 D COGs: COG1176 ABC-type spermidine/putrescine transport system permease component I; InterPro IPR000515; KEGG: tpp:TPASS_0653 spermidine/putrescine ABC transporter, permease; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Spermidine/putrescine transport system permease PotB; IMG reference gene:2503957151; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 981513..982451 Sphaerochaeta coccoides DSM 17374 10495162 YP_004411455.1 CDS Spico_0849 NC_015436.1 982448 983269 D COGs: COG1177 ABC-type spermidine/putrescine transport system permease component II; InterPro IPR000515; KEGG: tpp:TPASS_0654 spermidine/putrescine ABC transporter, permease; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Spermidine/putrescine ABC transporter, permease; IMG reference gene:2503957152; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 982448..983269 Sphaerochaeta coccoides DSM 17374 10495163 YP_004411456.1 CDS Spico_0850 NC_015436.1 983355 984452 D COGs: COG0687 Spermidine/putrescine-binding periplasmic protein; InterPro IPR006059; KEGG: tpp:TPASS_0655 spermidine/putrescine ABC transporter, periplasmic binding protein; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Spermidine/putrescine ABC transporter, periplasmic binding protein; IMG reference gene:2503957153; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein 983355..984452 Sphaerochaeta coccoides DSM 17374 10495164 YP_004411457.1 CDS Spico_0851 NC_015436.1 984591 985154 R COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182; KEGG: dhd:Dhaf_2686 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: uncharacterized protein; IMG reference gene:2503957154; PFAM: Acetyltransferase (GNAT) family; N-acetyltransferase GCN5 complement(984591..985154) Sphaerochaeta coccoides DSM 17374 10495165 YP_004411458.1 CDS Spico_0852 NC_015436.1 985335 986597 D COGs: COG0545 FKBP-type peptidyl-prolyl cis-trans isomerase 1; InterPro IPR000774:IPR001179; KEGG: dol:Dole_1577 peptidylprolyl isomerase FKBP-type; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal; SPTR: Peptidyl-prolyl cis-trans isomerase; IMG reference gene:2503957155; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase; FKBP-type peptidylprolyl isomerase 985335..986597 Sphaerochaeta coccoides DSM 17374 10495166 YP_004411459.1 CDS Spico_0853 NC_015436.1 986686 987138 R COGs: COG2731 Beta-galactosidase beta subunit; InterPro IPR004375; KEGG: sea:SeAg_B4753 cytoplasmic protein; PFAM: Conserved hypothetical protein CHP00022; SPTR: cytoplasmic protein; TIGRFAM: Conserved hypothetical protein CHP00022; IMG reference gene:2503957156; PFAM: Domain of unknown function (DUF386); TIGRFAM: uncharacterized protein, YhcH/YjgK/YiaL family; hypothetical protein complement(986686..987138) Sphaerochaeta coccoides DSM 17374 10495167 YP_004411460.1 CDS Spico_0854 NC_015436.1 987220 987876 R KEGG: eel:EUBELI_01147 cytidylate kinase; SPTR: uncharacterized protein; IMG reference gene:2503957157; cytidylate kinase complement(987220..987876) Sphaerochaeta coccoides DSM 17374 10495168 YP_004411461.1 CDS Spico_0855 NC_015436.1 988034 989263 R COGs: COG0373 Glutamyl-tRNA reductase; HAMAP: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; InterPro IPR015895:IPR006151:IPR000343; KEGG: cpy:Cphy_1368 glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; PRIAM: Glutamyl-tRNA reductase; SPTR: uncharacterized protein; IMG reference gene:2503957158; PFAM: Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, N-terminal domain; TIGRFAM: glutamyl-tRNA reductase; glutamyl-tRNA reductase complement(988034..989263) Sphaerochaeta coccoides DSM 17374 10495169 YP_004411462.1 CDS Spico_0856 NC_015436.1 989491 990294 R COGs: COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase; InterPro IPR012904:IPR003265; KEGG: cac:CA_C2707 8-oxoguanine-DNA-glycosylase; PFAM: 8-oxoguanine DNA glycosylase, N-terminal; HhH-GPD domain; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SMART: HhH-GPD domain; SPTR: DNA-(Apurinic or apyrimidinic site) lyase; IMG reference gene:2503957159; PFAM: HhH-GPD superfamily base excision DNA repair protein; 8-oxoguanine DNA glycosylase, N-terminal domain; TIGRFAM: 8-oxoguanine DNA-glycosylase (ogg); DNA-(apurinic or apyrimidinic site) lyase complement(989491..990294) Sphaerochaeta coccoides DSM 17374 10495170 YP_004411463.1 CDS Spico_0857 NC_015436.1 990647 992992 D COGs: COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase synthetase domain; InterPro IPR000728:IPR010918:IPR010074; KEGG: lpa:lpa_02423 phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase-related protein; AIR synthase-related protein, C-terminal; PRIAM: Phosphoribosylformylglycinamidine synthase; SPTR: Phosphoribosylformylglycinamidine synthase II; TIGRFAM: Phosphoribosylformylglycinamidine synthase II; IMG reference gene:2503957160; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase II; phosphoribosylformylglycinamidine synthase subunit II 990647..992992 Sphaerochaeta coccoides DSM 17374 10495171 YP_004411464.1 CDS Spico_0858 NC_015436.1 993011 994126 D COGs: COG0150 Phosphoribosylaminoimidazole (AIR) synthetase; InterPro IPR000728:IPR010918:IPR004733; KEGG: ftn:FTN_0419 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase-related protein, C-terminal; AIR synthase-related protein; PRIAM: Phosphoribosylformylglycinamidine cyclo-ligase; SPTR: Phosphoribosylformylglycinamidine cyclo-ligase; TIGRFAM: Phosphoribosylformylglycinamidine cyclo-ligase; IMG reference gene:2503957161; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase; phosphoribosylformylglycinamidine cyclo-ligase 993011..994126 Sphaerochaeta coccoides DSM 17374 10495172 YP_004411465.1 CDS Spico_0859 NC_015436.1 994123 995502 D COGs: COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase glutamine amidotransferase domain; InterPro IPR010075; KEGG: lpn:lpg1676 phosphoribosylformylglycinamidine synthase I; PRIAM: Phosphoribosylformylglycinamidine synthase; SPTR: Phosphoribosylformylglycinamidine synthase I; TIGRFAM: Phosphoribosylformylglycinamidine synthase I; IMG reference gene:2503957162; PFAM: Glutamine amidotransferase class-I; TIGRFAM: phosphoribosylformylglycinamidine synthase I; phosphoribosylformylglycinamidine synthase I 994123..995502 Sphaerochaeta coccoides DSM 17374 10495173 YP_004411466.1 CDS Spico_0860 NC_015436.1 995495 996505 D COGs: COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; HAMAP: SAICAR synthetase; InterPro IPR001636; KEGG: lpa:lpa_02418 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; PRIAM: Phosphoribosylaminoimidazolesuccinocarboxamide synthase; SPTR: Phosphoribosylaminoimidazole-succinocarboxamide synthase; IMG reference gene:2503957163; PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase 995495..996505 Sphaerochaeta coccoides DSM 17374 10495174 YP_004411467.1 CDS Spico_0861 NC_015436.1 996555 997031 D COGs: COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase; InterPro IPR000031; KEGG: dtu:Dtur_0269 phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: Phosphoribosylaminoimidazole carboxylase, core; SPTR: Phosphoribosylaminoimidazole carboxylase, catalytic subunit; IMG reference gene:2503957164; PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein; 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase 996555..997031 Sphaerochaeta coccoides DSM 17374 10495175 YP_004411468.1 CDS Spico_0862 NC_015436.1 997019 998488 D COGs: COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase; InterPro IPR000583:IPR000836:IPR005854; KEGG: lpp:lpp1646 amidophosphoribosyltransferase; PFAM: Glutamine amidotransferase, class-II; Phosphoribosyltransferase; PRIAM: Amidophosphoribosyltransferase; SPTR: Amidophosphoribosyltransferase; TIGRFAM: Amidophosphoribosyl transferase; IMG reference gene:2503957165; PFAM: Phosphoribosyl transferase domain; Glutamine amidotransferases class-II; TIGRFAM: amidophosphoribosyltransferase; amidophosphoribosyltransferase 997019..998488 Sphaerochaeta coccoides DSM 17374 10495176 YP_004411469.1 CDS Spico_0863 NC_015436.1 998475 1000451 D COGs: COG0151 Phosphoribosylamine-glycine ligase; HAMAP: Phosphoribosylglycinamide synthetase; InterProIPR020562:IPR020561:IPR020560:IPR002376:IPR 000115; KEGG: pif:PITG_12300 phosphoribosylglycinamide synthetase, PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; Formyl transferase, N-terminal; PRIAM: Phosphoribosylamine--glycine ligase., Phosphoribosylglycinamide formyltransferase; SPTR: Phosphoribosylamine/glycine ligase; TIGRFAM: Phosphoribosylglycinamide synthetase; IMG reference gene:2503957166; PFAM: Phosphoribosylglycinamide synthetase, N domain; Formyl transferase; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase; phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent; Phosphoribosylamine--glycine ligase 998475..1000451 Sphaerochaeta coccoides DSM 17374 10495177 YP_004411470.1 CDS Spico_0864 NC_015436.1 1000441 1001538 R KEGG: nmu:Nmul_A0641 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957167; hypothetical protein complement(1000441..1001538) Sphaerochaeta coccoides DSM 17374 10495178 YP_004411471.1 CDS Spico_0865 NC_015436.1 1001584 1002042 R COGs: COG0251 translation initiation inhibitor yjgF family; InterPro IPR006175:IPR006056; KEGG: tde:TDE2069 endoribonuclease L-PSP, PFAM: Endoribonuclease L-PSP; SPTR: uncharacterized protein; TIGRFAM: YjgF-like protein; IMG reference gene:2503957168; PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP; endoribonuclease L-PSP complement(1001584..1002042) Sphaerochaeta coccoides DSM 17374 10495179 YP_004411472.1 CDS Spico_0866 NC_015436.1 1002099 1004309 D COGs: COG4225 unsaturated glucuronyl hydrolase involved in regulation of surface properties and related protein; InterPro IPR010905; KEGG: ote:Oter_1360 glycosy hydrolase; PFAM: Glycosyl hydrolase, family 88; SPTR: Glycosyl hydrolase 88; IMG reference gene:2503957169; PFAM: Glycosyl Hydrolase 88; glycosyl hydrolase 88 1002099..1004309 Sphaerochaeta coccoides DSM 17374 10495180 YP_004411473.1 CDS Spico_0867 NC_015436.1 1004378 1005235 R COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: sta:STHERM_c08200 transporter; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Transporter; IMG reference gene:2503957170; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 2 complement(1004378..1005235) Sphaerochaeta coccoides DSM 17374 10495181 YP_004411474.1 CDS Spico_0868 NC_015436.1 1005237 1006193 R COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: sta:STHERM_c08210 transporter; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Transporter; IMG reference gene:2503957171; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 1 complement(1005237..1006193) Sphaerochaeta coccoides DSM 17374 10495182 YP_004411475.1 CDS Spico_0869 NC_015436.1 1006284 1007573 R COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: sta:STHERM_c08220 extracellular solute-binding protein, family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein, family 1; IMG reference gene:2503957172; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein complement(1006284..1007573) Sphaerochaeta coccoides DSM 17374 10495183 YP_004411476.1 CDS Spico_0870 NC_015436.1 1008055 1009299 D COGs: COG0133 Tryptophan synthase beta chain; HAMAP: Tryptophan synthase beta chain/beta chain-like; InterPro IPR001926:IPR023026:IPR006654; KEGG: pca:Pcar_1244 tryptophan synthase subunit beta; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; PRIAM: Tryptophan synthase; SPTR: Tryptophan synthase subunit beta; TIGRFAM: Tryptophan synthase, beta chain; IMG reference gene:2503957173; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit; tryptophan synthase subunit beta 1008055..1009299 Sphaerochaeta coccoides DSM 17374 10495184 YP_004411477.1 CDS Spico_0871 NC_015436.1 1009398 1010195 R InterPro IPR021139; KEGG: vpa:VP1078 hypothetical protein; PFAM: Domain of unknown function DUF88; SPTR: uncharacterized protein VP1078; IMG reference gene:2503957174; PFAM: Protein of unknown function DUF88; hypothetical protein complement(1009398..1010195) Sphaerochaeta coccoides DSM 17374 10495185 YP_004411478.1 CDS Spico_0872 NC_015436.1 1010432 1010890 R KEGG: cpo:COPRO5265_1058 TM2 domain family protein; SPTR: Predicted membrane protein; IMG reference gene:2503957175; PFAM: TM2 domain; hypothetical protein complement(1010432..1010890) Sphaerochaeta coccoides DSM 17374 10495186 YP_004411479.1 CDS Spico_0873 NC_015436.1 1010877 1011266 R KEGG: brm:Bmur_1470 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957176; hypothetical protein complement(1010877..1011266) Sphaerochaeta coccoides DSM 17374 10495187 YP_004411480.1 CDS Spico_0874 NC_015436.1 1011263 1012339 R COGs: COG4260 virion core protein (lumpy skin disease virus); KEGG: cce:Ccel_1422 antifreeze protein type I; SPTR: Antifreeze protein type I; IMG reference gene:2503957177; PFAM: SPFH domain / Band 7 family; antifreeze protein type I complement(1011263..1012339) Sphaerochaeta coccoides DSM 17374 10495188 YP_004411481.1 CDS Spico_0875 NC_015436.1 1012725 1014059 D COGs: COG0282 Acetate kinase; HAMAP: Acetate kinase; InterPro IPR000890:IPR004372; KEGG: ssm:Spirs_2158 acetate kinase; PFAM: Acetate/butyrate kinase; PRIAM: Acetate kinase; SPTR: Acetate kinase; TIGRFAM: Acetate kinase; IMG reference gene:2503957178; PFAM: Acetokinase; TIGRFAM: acetate kinase; acetate kinase 1012725..1014059 Sphaerochaeta coccoides DSM 17374 10495189 YP_004411482.1 CDS Spico_0876 NC_015436.1 1014131 1014688 R COGs: COG0693 intracellular protease/amidase; InterPro IPR002818:IPR006287; KEGG: ssm:Spirs_2243 DJ-1 family protein; PFAM: ThiJ/PfpI; SPTR: protease; TIGRFAM: DJ-1; IMG reference gene:2503957179; PFAM: DJ-1/PfpI family; TIGRFAM: DJ-1 family protein; DJ-1 family protein complement(1014131..1014688) Sphaerochaeta coccoides DSM 17374 10495190 YP_004411483.1 CDS Spico_0877 NC_015436.1 1014715 1015791 R COGs: COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR006218:IPR006219; KEGG: ssm:Spirs_2244 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; PRIAM: 3-deoxy-7-phosphoheptulonate synthase; SPTR: Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive; TIGRFAM: DHAP synthase, class 1; IMG reference gene:2503957180; PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase complement(1014715..1015791) Sphaerochaeta coccoides DSM 17374 10495191 YP_004411484.1 CDS Spico_0878 NC_015436.1 1015957 1016802 D InterPro IPR019734; KEGG: fgr:FG08956.1 hypothetical protein; SPTR: ATP/GTP binding protein; IMG reference gene:2503957181; hypothetical protein 1015957..1016802 Sphaerochaeta coccoides DSM 17374 10495192 YP_004411485.1 CDS Spico_0879 NC_015436.1 1017106 1018251 D COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: aoe:Clos_2502 extracellular ligand-binding receptor; PFAM: Extracellular ligand-binding receptor; SPTR: Extracellular ligand-binding receptor; IMG reference gene:2503957182; PFAM: Receptor family ligand binding region; amino acid ABC transporter substrate-binding protein 1017106..1018251 Sphaerochaeta coccoides DSM 17374 10495193 YP_004411486.1 CDS Spico_0880 NC_015436.1 1018351 1019244 D COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: tjr:TherJR_2668 inner-membrane translocator; PFAM: ABC transporter permease; SPTR: Inner-membrane translocator; IMG reference gene:2503957183; PFAM: Branched-chain amino acid transport system / permease component; amino acid ABC transporter permease 1018351..1019244 Sphaerochaeta coccoides DSM 17374 10495194 YP_004411487.1 CDS Spico_0881 NC_015436.1 1019241 1020347 D COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: aoe:Clos_2500 inner-membrane translocator; PFAM: ABC transporter permease; SPTR: Inner-membrane translocator; IMG reference gene:2503957184; PFAM: Branched-chain amino acid transport system / permease component; amino acid ABC transporter permease 1019241..1020347 Sphaerochaeta coccoides DSM 17374 10495195 YP_004411488.1 CDS Spico_0882 NC_015436.1 1020344 1021114 D COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: tjr:TherJR_2666 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; IMG reference gene:2503957185; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; amino acid ABC transporter ATP-binding protein 1020344..1021114 Sphaerochaeta coccoides DSM 17374 10495196 YP_004411489.1 CDS Spico_0883 NC_015436.1 1021107 1021811 D COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: tjr:TherJR_2665 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: uncharacterized protein; IMG reference gene:2503957186; PFAM: ABC transporter; amino acid ABC transporter ATP-binding protein 1021107..1021811 Sphaerochaeta coccoides DSM 17374 10495197 YP_004411490.1 CDS Spico_0884 NC_015436.1 1021901 1023709 R COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR000873; KEGG: ssm:Spirs_2245 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Long-chain-fatty-acid--CoA ligase; SPTR: AMP-dependent synthetase and ligase; IMG reference gene:2503957187; PFAM: AMP-binding enzyme; long-chain-fatty-acid--CoA ligase complement(1021901..1023709) Sphaerochaeta coccoides DSM 17374 10495198 YP_004411491.1 CDS Spico_0885 NC_015436.1 1023733 1024647 R COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; InterPro IPR001279; KEGG: ssm:Spirs_2246 hypothetical protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; SPTR: Metallo-beta-lactamase domain protein; IMG reference gene:2503957188; PFAM: Metallo-beta-lactamase superfamily; beta-lactamase domain-containing protein complement(1023733..1024647) Sphaerochaeta coccoides DSM 17374 10495199 YP_004411492.1 CDS Spico_0886 NC_015436.1 1024975 1026366 D COGs: COG0017 Aspartyl/asparaginyl-tRNA synthetase; HAMAP: Asparaginyl-tRNA synthetase, class IIb; InterPro IPR004365:IPR004364:IPR004522; KEGG: ssm:Spirs_2248 asparaginyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; PRIAM: Asparagine--tRNA ligase; SPTR: Asparaginyl-tRNA synthetase; TIGRFAM: Asparaginyl-tRNA synthetase, class IIb; IMG reference gene:2503957189; PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: asparaginyl-tRNA synthetase; asparaginyl-tRNA synthetase 1024975..1026366 Sphaerochaeta coccoides DSM 17374 10495200 YP_004411493.1 CDS Spico_0887 NC_015436.1 1026352 1026894 R COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792; KEGG: sen:SACE_1981 protein kinase/LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; SPTR: Protein kinase/transcriptional regulator, LuxR family; IMG reference gene:2503957190; PFAM: Bacterial regulatory proteins, luxR family; LuxR family transcriptional regulator complement(1026352..1026894) Sphaerochaeta coccoides DSM 17374 10495201 YP_004411494.1 CDS Spico_0888 NC_015436.1 1027047 1027655 R COGs: COG1671 conserved hypothetical protein; HAMAP: Protein of unknown function DUF188; InterPro IPR003791; KEGG: mxa:MXAN_5526 YaiI/YqxD family protein; PFAM: Protein of unknown function DUF188; SPTR: UPF0178 protein MXAN_5526; IMG reference gene:2503957191; PFAM: Uncharacterized BCR, YaiI/YqxD family COG1671; hypothetical protein complement(1027047..1027655) Sphaerochaeta coccoides DSM 17374 10495202 YP_004411495.1 CDS Spico_0889 NC_015436.1 1027819 1029477 D COGs: COG0205 6-phosphofructokinase; InterPro IPR000023:IPR011183; KEGG: ssm:Spirs_2255 diphosphate/fructose-6-phosphate1-phosphotransfe rase; PFAM: Phosphofructokinase domain; SPTR: Diphosphate--fructose-6-phosphate 1-phosphotransferase; TIGRFAM: Pyrophosphate-dependent phosphofructokinase PfpB; IMG reference gene:2503957192; PFAM: Phosphofructokinase; TIGRFAM: diphosphate--fructose-6-phosphate 1-phosphotransferase; pyrophosphate-dependent phosphofructokinase 1027819..1029477 Sphaerochaeta coccoides DSM 17374 10495203 YP_004411496.1 CDS Spico_0890 NC_015436.1 1029692 1032211 D COGs: COG3250 Beta-galactosidase/beta-glucuronidase; KEGG: ssm:Spirs_1196 beta-mannosidase; PRIAM: Beta-mannosidase; SPTR: Beta-mannosidase; IMG reference gene:2503957193; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Beta-mannosidase 1029692..1032211 Sphaerochaeta coccoides DSM 17374 10495204 YP_004411497.1 CDS Spico_0891 NC_015436.1 1032302 1033504 D COGs: COG1454 Alcohol dehydrogenase class IV; InterPro IPR001670; KEGG: dsy:DSY1101 hypothetical protein; PFAM: Alcohol dehydrogenase, iron-type; PRIAM: Alcohol dehydrogenase; SPTR: uncharacterized protein; IMG reference gene:2503957194; PFAM: Iron-containing alcohol dehydrogenase; alcohol dehydrogenase 1032302..1033504 Sphaerochaeta coccoides DSM 17374 10495205 YP_004411498.1 CDS Spico_0892 NC_015436.1 1033576 1034952 D COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: dsy:DSY1102 hypothetical protein; PFAM: Aldehyde dehydrogenase domain; SPTR: uncharacterized protein; IMG reference gene:2503957195; PFAM: Aldehyde dehydrogenase; aldehyde dehydrogenase 1033576..1034952 Sphaerochaeta coccoides DSM 17374 10495206 YP_004411499.1 CDS Spico_0893 NC_015436.1 1035129 1036478 R COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: ssm:Spirs_2123 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: bacterial extracellular solute-binding protein; IMG reference gene:2503957196; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein complement(1035129..1036478) Sphaerochaeta coccoides DSM 17374 10495207 YP_004411500.1 CDS Spico_0894 NC_015436.1 1036702 1037565 R COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: ssm:Spirs_2121 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Sugar ABC transporter permease; IMG reference gene:2503957197; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein complement(1036702..1037565) Sphaerochaeta coccoides DSM 17374 10495208 YP_004411501.1 CDS Spico_0895 NC_015436.1 1037568 1038542 R COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: ssm:Spirs_2122 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Sugar ABC transporter permease; IMG reference gene:2503957198; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein complement(1037568..1038542) Sphaerochaeta coccoides DSM 17374 10495209 YP_004411502.1 CDS Spico_0896 NC_015436.1 1038564 1039829 R COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: ssm:Spirs_1197 ROK family protein; PFAM: ROK; SPTR: transcriptional regulator; IMG reference gene:2503957199; PFAM: ROK family; ROK family protein complement(1038564..1039829) Sphaerochaeta coccoides DSM 17374 10495210 YP_004411503.1 CDS Spico_0897 NC_015436.1 1039921 1041501 D COGs: COG3525 N-acetyl-beta-hexosaminidase; InterPro IPR015883; KEGG: sli:Slin_4336 beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; PRIAM: Beta-N-acetylhexosaminidase; SPTR: N-acetyl-beta-hexosaminidase; IMG reference gene:2503957200; PFAM: Glycosyl hydrolase 20, catalytic domain; beta-N-acetylhexosaminidase 1039921..1041501 Sphaerochaeta coccoides DSM 17374 10495211 YP_004411504.1 CDS Spico_0898 NC_015436.1 1041532 1041834 R COGs: COG1534 RNA-binding protein containing KH domain possibly ribosomal protein; InterPro IPR001890; KEGG: ssm:Spirs_2265 protein of unknown function UPF0044; PFAM: RNA-binding, CRM domain; SPTR: uncharacterized protein; IMG reference gene:2503957201; PFAM: CRS1 / YhbY (CRM) domain; TIGRFAM: RNA-binding protein, YhbY family; hypothetical protein complement(1041532..1041834) Sphaerochaeta coccoides DSM 17374 10495212 YP_004411505.1 CDS Spico_0899 NC_015436.1 1041845 1043605 R COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR000873; KEGG: ssm:Spirs_2267 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Long-chain-fatty-acid--CoA ligase; SPTR: Long-chain-fatty-acid--CoA ligase, ; IMG reference gene:2503957202; PFAM: AMP-binding enzyme; long-chain-fatty-acid--CoA ligase complement(1041845..1043605) Sphaerochaeta coccoides DSM 17374 10495213 YP_004411506.1 CDS Spico_0900 NC_015436.1 1043849 1045231 D COGs: COG0285 Folylpolyglutamate synthase; InterPro IPR013221:IPR004101:IPR001645; KEGG: ssm:Spirs_2271 FolC bifunctional protein; PFAM: Mur ligase, C-terminal; Mur ligase, central; SPTR: Folylpolyglutamate synthetase, ; TIGRFAM: Folylpolyglutamate synthetase; IMG reference gene:2503957203; PFAM: Mur ligase, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 1043849..1045231 Sphaerochaeta coccoides DSM 17374 10495214 YP_004411507.1 CDS Spico_0901 NC_015436.1 1045222 1046694 D COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP; InterPro IPR008616:IPR008532; KEGG: ssm:Spirs_2274 fibronectin-binding A domain protein; PFAM: Domain of unknown function DUF814; Fibronectin-binding A, N-terminal; SPTR: Fibronectin/fibrinogen-binding protein, internal deletion; IMG reference gene:2503957204; PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA); hypothetical protein 1045222..1046694 Sphaerochaeta coccoides DSM 17374 10495215 YP_004411508.1 CDS Spico_0902 NC_015436.1 1046681 1047595 D KEGG: ttj:TTHA1711 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957205; hypothetical protein 1046681..1047595 Sphaerochaeta coccoides DSM 17374 10495216 YP_004411509.1 CDS Spico_0903 NC_015436.1 1047592 1049076 D KEGG: sta:STHERM_c03340 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957206; hypothetical protein 1047592..1049076 Sphaerochaeta coccoides DSM 17374 10495217 YP_004411510.1 CDS Spico_0904 NC_015436.1 1049061 1049993 R COGs: COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase; HAMAP: tRNA delta(2)-isopentenylpyrophosphate transferase; InterPro IPR002627:IPR018022; KEGG: sta:STHERM_c12200 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; PRIAM: tRNA isopentenyltransferase; SPTR: tRNA delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; IMG reference gene:2503957207; PFAM: IPP transferase; TIGRFAM: tRNA dimethylallyltransferase; tRNA dimethylallyltransferase complement(1049061..1049993) Sphaerochaeta coccoides DSM 17374 10495218 YP_004411511.1 CDS Spico_0905 NC_015436.1 1049983 1050243 R KEGG: rrs:RoseRS_1675 dehydrogenase catalytic domain-containing protein; SPTR: Predicted protein; IMG reference gene:2503957208; hypothetical protein complement(1049983..1050243) Sphaerochaeta coccoides DSM 17374 10495219 YP_004411512.1 CDS Spico_0906 NC_015436.1 1050307 1050873 R COGs: COG1102 Cytidylate kinase; HAMAP: Cytidylate kinase, InterPro IPR011994:IPR011892; KEGG: tde:TDE1087 cytidylate kinase; PFAM: Cytidylate kinase domain; SPTR: Cytidylate kinase; TIGRFAM: Cytidylate kinase, IMG reference gene:2503957209; PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase; cytidylate kinase complement(1050307..1050873) Sphaerochaeta coccoides DSM 17374 10495220 YP_004411513.1 CDS Spico_0907 NC_015436.1 1050925 1051794 R COGs: COG1561 Uncharacterized stress-induced protein; InterPro IPR013527:IPR013551:IPR005229; KEGG: sta:STHERM_c12240 protein YicC; PFAM: Domain of unknown function DUF1732; YicC-like, N-terminal; SPTR: Protein YicC; TIGRFAM: Conserved hypothetical protein CHP00255; IMG reference gene:2503957210; PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: TIGR00255 family protein; hypothetical protein complement(1050925..1051794) Sphaerochaeta coccoides DSM 17374 10495221 YP_004411514.1 CDS Spico_0908 NC_015436.1 1051791 1053365 R COGs: COG0773 UDP-N-acetylmuramate-alanine ligase; InterPro IPR000713:IPR013221:IPR004101; KEGG: ssm:Spirs_2282 UDP-N-acetylmuramate/alanine ligase; PFAM: Mur ligase, C-terminal; Mur ligase, central; Mur ligase, N-terminal; PRIAM: UDP-N-acetylmuramate--L-alanine ligase; SPTR: UDP-N-acetylmuramate--L-alanine ligase; IMG reference gene:2503957211; PFAM: Mur ligase, catalytic domain; Mur ligase, glutamate ligase domain; Mur ligase middle domain; UDP-N-acetylmuramate--L-alanine ligase complement(1051791..1053365) Sphaerochaeta coccoides DSM 17374 10495222 YP_004411515.1 CDS Spico_0909 NC_015436.1 1053362 1054522 R KEGG: pbe:PB000454.03.0 hypothetical protein; SPTR: Homoserine O-acetyltransferase; IMG reference gene:2503957212; hypothetical protein complement(1053362..1054522) Sphaerochaeta coccoides DSM 17374 10495223 YP_004411516.1 CDS Spico_0910 NC_015436.1 1054651 1056258 D COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase; HAMAP:UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-di aminopimelateligase; InterPro IPR000713:IPR013221:IPR004101:IPR005761; KEGG: rrs:RoseRS_0794 UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; PRIAM:UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelateligase; SPTR: UDP-N-acetylmuramyl-tripeptide synthetase; TIGRFAM:UDP-N-acetylmuramoylalanyl-D-glutamate-2,6- diaminopimelateligase; IMG reference gene:2503957213; PFAM: Mur ligase, glutamate ligase domain; Mur ligase, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-d iaminopimelate ligase 1054651..1056258 Sphaerochaeta coccoides DSM 17374 10495224 YP_004411517.1 CDS Spico_0911 NC_015436.1 1056255 1057421 D COGs: COG1181 D-alanine-D-alanine ligase and related ATP-grasp protein; HAMAP: D-alanine--D-alanine ligase; InterPro IPR011127:IPR011095:IPR005905; KEGG: ara:Arad_1819 D-alanyl-alanine synthetase A; PFAM: D-alanine--D-alanine ligase, N-terminal; D-alanine--D-alanine ligase, C-terminal; PRIAM: D-alanine--D-alanine ligase; SPTR: D-alanine-D-alanine ligase; IMG reference gene:2503957214; PFAM: D-ala D-ala ligase N-terminus; D-ala D-ala ligase C-terminus; TIGRFAM: D-alanine--D-alanine ligase; D-alanine--D-alanine ligase 1056255..1057421 Sphaerochaeta coccoides DSM 17374 10495225 YP_004411518.1 CDS Spico_0912 NC_015436.1 1057418 1058632 D COGs: COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; HAMAP: DNA polymerase IV; InterPro IPR001126:IPR022880; KEGG: ssm:Spirs_2898 DNA-directed DNA polymerase; PFAM: DNA-repair protein, UmuC-like; PRIAM: DNA-directed DNA polymerase; SPTR: DNA polymerase IV; IMG reference gene:2503957215; PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; DNA polymerase IV 1057418..1058632 Sphaerochaeta coccoides DSM 17374 10495226 YP_004411519.1 CDS Spico_0913 NC_015436.1 1058733 1059251 D COGs: COG0219 rRNA methylase (SpoU class); InterPro IPR001537; KEGG: dae:Dtox_0805 RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase, SpoU; SPTR: uncharacterized protein; IMG reference gene:2503957216; PFAM: SpoU rRNA Methylase; TIGRFAM: rRNA methylase, , group 2; tRNA/rRNA methyltransferase SpoU 1058733..1059251 Sphaerochaeta coccoides DSM 17374 10495227 YP_004411520.1 CDS Spico_0914 NC_015436.1 1059244 1060086 D COGs: COG0345 Pyrroline-5-carboxylate reductase; InterPro IPR004455:IPR000304; KEGG: ssm:Spirs_2903 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; PRIAM: Pyrroline-5-carboxylate reductase; SPTR: Pyrroline-5-carboxylate reductase; TIGRFAM: Pyrroline-5-carboxylate reductase; IMG reference gene:2503957217; PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase; pyrroline-5-carboxylate reductase 1059244..1060086 Sphaerochaeta coccoides DSM 17374 10495228 YP_004411521.1 CDS Spico_0915 NC_015436.1 1060126 1061412 D COGs: COG0172 Seryl-tRNA synthetase; HAMAP: Seryl-tRNA synthetase, class IIa; InterPro IPR015866:IPR002314:IPR002317; KEGG: tde:TDE2307 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Seryl-tRNA synthetase, class IIa, N-terminal; PRIAM: Serine--tRNA ligase; SPTR: Seryl-tRNA synthetase; TIGRFAM: Seryl-tRNA synthetase, class IIa; IMG reference gene:2503957218; PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase; seryl-tRNA synthetase 1060126..1061412 Sphaerochaeta coccoides DSM 17374 10495229 YP_004411522.1 CDS Spico_0916 NC_015436.1 1061456 1062898 D COGs: COG1488 Nicotinic acid phosphoribosyltransferase; InterPro IPR015977:IPR006405; KEGG: ssm:Spirs_2906 nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; SPTR: Nicotinate phosphoribosyltransferase; TIGRFAM: Nicotinate phosphoribosyltransferase IMG reference gene:2503957219; PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family; TIGRFAM: nicotinate phosphoribosyltransferase; nicotinate phosphoribosyltransferase 1061456..1062898 Sphaerochaeta coccoides DSM 17374 10495230 YP_004411523.1 CDS Spico_0917 NC_015436.1 1062923 1063696 R COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: ssm:Spirs_2928 cell wall hydrolase/autolysin; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic; SPTR: N-acetylmuramoyl-L-alanine amidase; IMG reference gene:2503957220; PFAM: N-acetylmuramoyl-L-alanine amidase; cell wall hydrolase/autolysin complement(1062923..1063696) Sphaerochaeta coccoides DSM 17374 10495231 YP_004411524.1 CDS Spico_0918 NC_015436.1 1063693 1064613 R KEGG: ssm:Spirs_2932 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957221; hypothetical protein complement(1063693..1064613) Sphaerochaeta coccoides DSM 17374 10495232 YP_004411525.1 CDS Spico_0919 NC_015436.1 1064613 1065740 R COGs: COG0263 Glutamate 5-kinase; HAMAP: Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase; InterPro IPR005715:IPR001048:IPR002478; KEGG: sta:STHERM_c19790 glutamate 5-kinase; PFAM: Aspartate/glutamate/uridylate kinase; Pseudouridine synthase/archaeosine transglycosylase; SMART: Pseudouridine synthase/archaeosine transglycosylase; SPTR: Glutamate 5-kinase; TIGRFAM: Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase; IMG reference gene:2503957222; PFAM: PUA domain; Amino acid kinase; TIGRFAM: glutamate 5-kinase; glutamate 5-kinase complement(1064613..1065740) Sphaerochaeta coccoides DSM 17374 10495233 YP_004411526.1 CDS Spico_0920 NC_015436.1 1065765 1067099 R COGs: COG0014 Gamma-glutamyl phosphate reductase; InterPro IPR000965; KEGG: sta:STHERM_c19780 gamma-glutamyl phosphate reductase; PRIAM: Glutamate-5-semialdehyde dehydrogenase; SPTR: Gamma-glutamyl phosphate reductase; TIGRFAM: Gamma-glutamyl phosphate reductase GPR; IMG reference gene:2503957223; PFAM: Aldehyde dehydrogenase; TIGRFAM: gamma-glutamyl phosphate reductase; glutamate-5-semialdehyde dehydrogenase complement(1065765..1067099) Sphaerochaeta coccoides DSM 17374 10495234 YP_004411527.1 CDS Spico_0921 NC_015436.1 1067299 1068585 D COGs: COG2252 Permease; InterPro IPR006043; KEGG: bpo:BP951000_1268 integral membrane transport protein; PFAM: Xanthine/uracil/vitamin C permease; SPTR: Integral membrane transport protein; IMG reference gene:2503957224; PFAM: Permease; xanthine/uracil/vitamin C permease 1067299..1068585 Sphaerochaeta coccoides DSM 17374 10495235 YP_004411528.1 CDS Spico_0922 NC_015436.1 1068988 1069470 D KEGG: dps:DP1907 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957225; hypothetical protein 1068988..1069470 Sphaerochaeta coccoides DSM 17374 10495236 YP_004411529.1 CDS Spico_0923 NC_015436.1 1069506 1069922 D KEGG: tpv:TP04_0148 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957226; hypothetical protein 1069506..1069922 Sphaerochaeta coccoides DSM 17374 10495237 YP_004411530.1 CDS Spico_0924 NC_015436.1 1070166 1070981 D COGs: COG0084 Mg-dependent DNase; InterPro IPR001130:IPR015991; KEGG: ssm:Spirs_2388 hydrolase, TatD family; PFAM: Deoxyribonuclease, TatD-related; SPTR: Sec-independent protein translocase TatD; TIGRFAM: Deoxyribonuclease, TatD Mg-dependent, prokaryote; IMG reference gene:2503957228; PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family; TatD family hydrolase 1070166..1070981 Sphaerochaeta coccoides DSM 17374 10495239 YP_004411531.1 CDS Spico_0925 NC_015436.1 1071186 1072178 D COGs: COG0191 Fructose/tagatose bisphosphate aldolase; InterPro IPR000771:IPR011289; KEGG: ssm:Spirs_2588 fructose-1,6-bisphosphate aldolase, class II; PFAM: Ketose-bisphosphate aldolase, class-II; PRIAM: Fructose-bisphosphate aldolase; SPTR: uncharacterized protein; TIGRFAM: Fructose-1,6-bisphosphate aldolase, class 2; Ketose-bisphosphate aldolase, class-II; IMG reference gene:2503957229; PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist; fructose-bisphosphate aldolase 1071186..1072178 Sphaerochaeta coccoides DSM 17374 10495240 YP_004411532.1 CDS Spico_0926 NC_015436.1 1072319 1072891 R COGs: COG0655 Multimeric flavodoxin WrbA; InterPro IPR005025; KEGG: ccb:Clocel_4239 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR: Iron-sulfur flavoprotein; IMG reference gene:2503957230; PFAM: NADPH-dependent FMN reductase; NADPH-dependent FMN reductase complement(1072319..1072891) Sphaerochaeta coccoides DSM 17374 10495241 YP_004411533.1 CDS Spico_0927 NC_015436.1 1073105 1073692 D COGs: COG0290 Translation initiation factor 3 (IF-3); HAMAP: Translation initiation factor 3; InterPro IPR001288:IPR019814:IPR019815; KEGG: ssm:Spirs_2590 translation initiation factor IF-3; PFAM: Translation initiation factor 3, N-terminal; Translation initiation factor 3, C-terminal; SPTR: Translation initiation factor IF-3; TIGRFAM: Translation initiation factor 3; IMG reference gene:2503957231; PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3; translation initiation factor 3 (bIF-3) 1073105..1073692 Sphaerochaeta coccoides DSM 17374 10495242 YP_004411534.1 CDS Spico_0928 NC_015436.1 1073775 1073972 D HAMAP: Ribosomal protein L35, non-mitochondrial; InterPro IPR001706:IPR021137; KEGG: ssm:Spirs_2591 ribosomal protein L35; PFAM: Ribosomal protein L35; SPTR: 50S ribosomal protein L35; TIGRFAM: Ribosomal protein L35, non-mitochondrial; IMG reference gene:2503957232; PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; 50S ribosomal protein L35 1073775..1073972 Sphaerochaeta coccoides DSM 17374 10495243 YP_004411535.1 CDS Spico_0929 NC_015436.1 1073988 1074344 D COGs: COG0292 Ribosomal protein L20; HAMAP: Ribosomal protein L20; InterPro IPR005813; KEGG: ssm:Spirs_2592 ribosomal protein L20; PFAM: Ribosomal protein L20; SPTR: 50S ribosomal protein L20; TIGRFAM: Ribosomal protein L20; IMG reference gene:2503957233; PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20; 50S ribosomal protein L20 1073988..1074344 Sphaerochaeta coccoides DSM 17374 10495244 YP_004411536.1 CDS Spico_0930 NC_015436.1 1074394 1074768 D KEGG: tde:TDE2153 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957234; hypothetical protein 1074394..1074768 Sphaerochaeta coccoides DSM 17374 10495245 YP_004411537.1 CDS Spico_0931 NC_015436.1 1075204 1076547 D InterPro IPR001440:IPR019734; KEGG: ssm:Spirs_2596 tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR-1; SPTR: TPR domain protein; IMG reference gene:2503957235; hypothetical protein 1075204..1076547 Sphaerochaeta coccoides DSM 17374 10495246 YP_004411538.1 CDS Spico_0932 NC_015436.1 1076575 1076994 D COGs: COG0802 ATPase or kinase; InterPro IPR003442; KEGG: tde:TDE1469 hypothetical protein; PFAM: Uncharacterised protein family UPF0079, ATPase bacteria; SPTR: uncharacterized protein; TIGRFAM: Uncharacterised protein family UPF0079, ATPase bacteria; IMG reference gene:2503957236; PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family; hypothetical protein 1076575..1076994 Sphaerochaeta coccoides DSM 17374 10495247 YP_004411539.1 CDS Spico_0933 NC_015436.1 1076991 1077689 D COGs: COG1214 Inactive homolog of metal-dependent protease molecular chaperone; InterPro IPR000905:IPR022496; KEGG: ssm:Spirs_2605 peptidase M22 glycoprotease; PFAM: Peptidase M22, glycoprotease; SPTR: Peptidase M22, glycoprotease; TIGRFAM: Conserved hypothetical protein CHP03725, YeaZ; IMG reference gene:2503957237; PFAM: Glycoprotease; TIGRFAM: universal bacterial protein YeaZ; hypothetical protein 1076991..1077689 Sphaerochaeta coccoides DSM 17374 10495248 YP_004411540.1 CDS Spico_0934 NC_015436.1 1077708 1078649 D COGs: COG0492 Thioredoxin reductase; InterPro IPR013027:IPR005982; KEGG: ssm:Spirs_2612 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: Thioredoxin-disulfide reductase; SPTR: Thioredoxin reductase; TIGRFAM: Thioredoxin reductase; IMG reference gene:2503957238; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase; thioredoxin reductase 1077708..1078649 Sphaerochaeta coccoides DSM 17374 10495249 YP_004411541.1 CDS Spico_0935 NC_015436.1 1078781 1080247 D COGs: COG0297 Glycogen synthase; HAMAP: Glycogen/starch synthases, ADP-glucose type; InterPro IPR011835:IPR013534:IPR001296; KEGG: gsu:GSU3257 glycogen synthase; PFAM: Starch synthase, catalytic domain; Glycosyl transferase, group 1; PRIAM: Starch synthase; SPTR: Glycogen synthase 2; TIGRFAM: Glycogen/starch synthases, ADP-glucose type; IMG reference gene:2503957239; PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; TIGRFAM: glycogen/starch synthases, ADP-glucose type; Glycogen synthase 1078781..1080247 Sphaerochaeta coccoides DSM 17374 10495250 YP_004411542.1 CDS Spico_0936 NC_015436.1 1080247 1081542 D COGs: COG0448 ADP-glucose pyrophosphorylase; InterPro IPR005835; KEGG: ssm:Spirs_2619 nucleotidyl transferase; PFAM: Nucleotidyl transferase; PRIAM: Glucose-1-phosphate adenylyltransferase; SPTR: Glucose-1-phosphate adenylyltransferase; IMG reference gene:2503957240; PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; glucose-1-phosphate adenylyltransferase 1080247..1081542 Sphaerochaeta coccoides DSM 17374 10495251 YP_004411543.1 CDS Spico_0937 NC_015436.1 1081698 1082162 R KEGG: ssm:Spirs_2621 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957241; hypothetical protein complement(1081698..1082162) Sphaerochaeta coccoides DSM 17374 10495252 YP_004411544.1 CDS Spico_0938 NC_015436.1 1082159 1083763 R COGs: COG0063 sugar kinase; InterPro IPR004443:IPR000631; KEGG: ssm:Spirs_2623 carbohydrate kinase, YjeF related protein; PFAM: YjeF-related protein, N-terminal; Uncharacterised protein family, carbohydrate kinase-related; SPTR: YjeF family protein; TIGRFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal; IMG reference gene:2503957242; PFAM: YjeF-related protein N-terminus; Carbohydrate kinase; TIGRFAM: yjeF N-terminal region; yjeF C-terminal region, hydroxyethylthiazole kinase-related; hypothetical protein complement(1082159..1083763) Sphaerochaeta coccoides DSM 17374 10495253 YP_004411545.1 CDS Spico_0939 NC_015436.1 1084097 1084510 D InterPro IPR001387; KEGG: dae:Dtox_2429 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator, XRE family; IMG reference gene:2503957243; PFAM: Helix-turn-helix; helix-turn-helix domain-containing protein 1084097..1084510 Sphaerochaeta coccoides DSM 17374 10495254 YP_004411546.1 CDS Spico_0940 NC_015436.1 1084670 1085716 D COGs: COG4143 ABC-type thiamine transport system periplasmic component; InterPro IPR006059:IPR005948; KEGG: ssm:Spirs_1695 ABC transporter, periplasmic binding protein, ThiB subfamily; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: ABC-type thiamine transport system, periplasmic component; TIGRFAM: Thiamine ABC transporter periplasmic binding protein; IMG reference gene:2503957244; PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: ABC transporter periplasmic binding protein, thiB subfamily; ABC transporter substrate-binding protein 1084670..1085716 Sphaerochaeta coccoides DSM 17374 10495255 YP_004411547.1 CDS Spico_0941 NC_015436.1 1085720 1087426 D COGs: COG1178 ABC-type Fe3+ transport system permease component; InterPro IPR000515; KEGG: ssm:Spirs_1694 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Maltooligosaccharide ABC transporter, permease component; IMG reference gene:2503957245; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 1085720..1087426 Sphaerochaeta coccoides DSM 17374 10495256 YP_004411548.1 CDS Spico_0942 NC_015436.1 1087423 1088502 D COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003439:IPR003593; KEGG: hut:Huta_0390 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; IMG reference gene:2503957246; PFAM: ABC transporter; Fe(3+)-transporting ATPase 1087423..1088502 Sphaerochaeta coccoides DSM 17374 10495257 YP_004411549.1 CDS Spico_0943 NC_015436.1 1088517 1090652 R COGs: COG0556 Helicase subunit of the DNA excision repair complex; HAMAP: Excinuclease ABC, B subunit; InterProIPR004807:IPR006935:IPR001650:IPR001943:IPR 014001; KEGG: ssm:Spirs_2331 excinuclease ABC, B subunit; PFAM: Helicase, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; UvrB/UvrC protein; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: UvrABC system protein B; TIGRFAM: Excinuclease ABC, B subunit; IMG reference gene:2503957247; PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit; excinuclease ABC subunit B complement(1088517..1090652) Sphaerochaeta coccoides DSM 17374 10495258 YP_004411550.1 CDS Spico_0944 NC_015436.1 1090668 1091969 R COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001254:IPR001478; KEGG: ssm:Spirs_2332 peptidase S1 and S6 chymotrypsin/Hap; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; PRIAM: HtrA2 peptidase; SMART: PDZ/DHR/GLGF; SPTR: Periplasmic serine protease DO (HtrA-1); IMG reference gene:2503957248; PFAM: Trypsin; DegP2 peptidase complement(1090668..1091969) Sphaerochaeta coccoides DSM 17374 10495259 YP_004411551.1 CDS Spico_0945 NC_015436.1 1092026 1093168 R COGs: COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis; InterPro IPR003374; KEGG: tte:TTE2482 thiamine biosynthesis lipoprotein; PFAM: Thiamine synthesis ApbE/UPF0280; SPTR: ApbE family lipoprotein; IMG reference gene:2503957249; PFAM: ApbE family; ApbE family lipoprotein complement(1092026..1093168) Sphaerochaeta coccoides DSM 17374 10495260 YP_004411552.1 CDS Spico_0946 NC_015436.1 1093174 1094133 R COGs: COG0524 Sugar kinase ribokinase; InterPro IPR011611; KEGG: msv:Mesil_1102 PfkB domain protein; PFAM: Carbohydrate/purine kinase; PRIAM: Fructokinase; SPTR: PfkB domain protein; IMG reference gene:2503957250; PFAM: pfkB family carbohydrate kinase; fructokinase complement(1093174..1094133) Sphaerochaeta coccoides DSM 17374 10495261 YP_004411553.1 CDS Spico_0947 NC_015436.1 1094143 1094949 R COGs: COG3294 conserved hypothetical protein; InterPro IPR006674:IPR003607; KEGG: ssm:Spirs_0575 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: uncharacterized protein; IMG reference gene:2503957251; PFAM: HD domain; metal dependent phosphohydrolase complement(1094143..1094949) Sphaerochaeta coccoides DSM 17374 10495262 YP_004411554.1 CDS Spico_0948 NC_015436.1 1095151 1096878 D COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; HAMAP: Glutaminyl-tRNA synthetase, bacterial; InterPro IPR022861:IPR020058:IPR020059:IPR004514; KEGG: ssm:Spirs_1481 glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain; PRIAM: Glutamine--tRNA ligase; SPTR: Glutaminyl-tRNA synthetase; TIGRFAM: Glutaminyl-tRNA synthetase, class Ic; IMG reference gene:2503957252; PFAM: tRNA synthetases class I (E and Q), catalytic domain; tRNA synthetases class I (E and Q), anti-codon binding domain; TIGRFAM: glutaminyl-tRNA synthetase; glutaminyl-tRNA synthetase 1095151..1096878 Sphaerochaeta coccoides DSM 17374 10495263 YP_004411555.1 CDS Spico_0949 NC_015436.1 1096916 1099690 D COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR000408:IPR011110; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Listeria/Bacterioides repeat; Regulator of chromosome condensation, RCC1; Two component regulator propeller; SPTR: uncharacterized protein; IMG reference gene:2503957253; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; hypothetical protein 1096916..1099690 Sphaerochaeta coccoides DSM 17374 10495264 YP_004411556.1 CDS Spico_0950 NC_015436.1 1099786 1100628 R InterPro IPR000792; KEGG: rle:RL0075 GerE family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; SPTR: DNA-binding response regulator; IMG reference gene:2503957254; PFAM: Bacterial regulatory proteins, luxR family; LuxR family transcriptional regulator complement(1099786..1100628) Sphaerochaeta coccoides DSM 17374 10495265 YP_004411557.1 CDS Spico_0951 NC_015436.1 1100861 1101400 R COGs: COG1592 Rubrerythrin; InterPro IPR003251; KEGG: cpy:Cphy_0524 rubrerythrin; PFAM: Rubrerythrin; SPTR: Rubrerythrin; IMG reference gene:2503957255; PFAM: Rubrerythrin; rubrerythrin complement(1100861..1101400) Sphaerochaeta coccoides DSM 17374 10495266 YP_004411558.1 CDS Spico_0952 NC_015436.1 1101426 1101836 R COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: eel:EUBELI_20027 Fur family transcriptional regulator, ferric uptake regulator; PFAM: Ferric-uptake regulator; SPTR: uncharacterized protein; IMG reference gene:2503957256; PFAM: Ferric uptake regulator family; ferric uptake regulator family protein complement(1101426..1101836) Sphaerochaeta coccoides DSM 17374 10495267 YP_004411559.1 CDS Spico_0953 NC_015436.1 1101998 1104595 R COGs: COG1092 SAM-dependent methyltransferase; KEGG: ssm:Spirs_1479 rRNA (guanine-N(2)-)-methyltransferase; PRIAM: rRNA (guanine-N(2)-)-methyltransferase; SPTR: Ribosomal RNA large subunit methyltransferase L; IMG reference gene:2503957257; PFAM: S-adenosylmethionine-dependent methyltransferase; rRNA (guanine-N(2)-)-methyltransferase complement(1101998..1104595) Sphaerochaeta coccoides DSM 17374 10495268 YP_004411560.1 CDS Spico_0954 NC_015436.1 1104656 1106461 D COGs: COG5421 Transposase; InterPro IPR002559; KEGG: cob:COB47_1677 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; IMG reference gene:2503957258; PFAM: Transposase DDE domain; transposase IS4 family protein 1104656..1106461 Sphaerochaeta coccoides DSM 17374 10495269 YP_004411561.1 CDS Spico_0955 NC_015436.1 1106778 1107245 D KEGG: ssm:Spirs_1477 hypothetical protein; SPTR: Predicted protein; IMG reference gene:2503957259; hypothetical protein 1106778..1107245 Sphaerochaeta coccoides DSM 17374 10495270 YP_004411562.1 CDS Spico_0956 NC_015436.1 1107249 1108589 D COGs: COG1109 Phosphomannomutase; InterPro IPR005844:IPR005845:IPR005846:IPR005843; KEGG: ssm:Spirs_1476 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; SPTR: Phosphomannomutase; IMG reference gene:2503957260; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I 1107249..1108589 Sphaerochaeta coccoides DSM 17374 10495271 YP_004411563.1 CDS Spico_0957 NC_015436.1 1108604 1109596 D COGs: COG1087 UDP-glucose 4-epimerase; InterPro IPR001509:IPR005886; KEGG: plt:Plut_0420 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: UDP-glucose 4-epimerase; SPTR: UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; IMG reference gene:2503957261; PFAM: NAD dependent epimerase/dehydratase; TIGRFAM: UDP-glucose-4-epimerase; UDP-galactose 4-epimerase 1108604..1109596 Sphaerochaeta coccoides DSM 17374 10495272 YP_004411564.1 CDS Spico_0958 NC_015436.1 1109616 1110008 R COGs: COG1321 Mn-dependent transcriptional regulator protein; InterPro IPR022687:IPR022689; KEGG: apv:Apar_1294 iron (metal) dependent repressor, DtxR family; PFAM: Iron dependent repressor, N-terminal; SMART: Iron dependent repressor, diptheria toxin type; SPTR: uncharacterized protein; IMG reference gene:2503957262; PFAM: Iron dependent repressor, N-terminal DNA binding domain; Iron dependent repressor, N-terminal protein complement(1109616..1110008) Sphaerochaeta coccoides DSM 17374 10495273 YP_004411565.1 CDS Spico_0959 NC_015436.1 1110280 1110492 D InterPro IPR007167; KEGG: cbt:CLH_2780 hypothetical protein; PFAM: Ferrous iron transporter, FeoA subunit; SMART: Ferrous iron transporter, FeoA subunit; SPTR: Conserved domain protein; IMG reference gene:2503957263; PFAM: FeoA domain; FeoA family protein 1110280..1110492 Sphaerochaeta coccoides DSM 17374 10495274 YP_004411566.1 CDS Spico_0960 NC_015436.1 1110529 1110765 D COGs: COG1918 Fe2+ transport system protein A; InterPro IPR007167; KEGG: eel:EUBELI_00573 ferrous iron transport protein A; PFAM: Ferrous iron transporter, FeoA subunit; SMART: Ferrous iron transporter, FeoA subunit; SPTR: uncharacterized protein; IMG reference gene:2503957264; PFAM: FeoA domain; FeoA family protein 1110529..1110765 Sphaerochaeta coccoides DSM 17374 10495275 YP_004411567.1 CDS Spico_0961 NC_015436.1 1110762 1112918 D COGs: COG0370 Fe2+ transport system protein B; InterProIPR002917:IPR011619:IPR011642:IPR011640:IPR 005225:IPR003373; KEGG: cbt:CLH_2778 ferrous iron transport protein B; PFAM: GTP-binding protein, HSR1-related; Ferrous iron transport protein B, N-terminal; Nucleoside recognition; Ferrous iron transport protein B, C-terminal; SPTR: Ferrous iron transport protein B; TIGRFAM: Ferrous iron transport protein B; Small GTP-binding protein; IMG reference gene:2503957265; PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain; ferrous iron transport protein B 1110762..1112918 Sphaerochaeta coccoides DSM 17374 10495276 YP_004411568.1 CDS Spico_0962 NC_015436.1 1112915 1113142 D KEGG: fma:FMG_1212 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957266; hypothetical protein 1112915..1113142 Sphaerochaeta coccoides DSM 17374 10495277 YP_004411569.1 CDS Spico_0963 NC_015436.1 1113338 1113928 R COGs: COG2249 NADPH-quinone reductase (modulator of drug activity B); InterPro IPR003680; KEGG: cbi:CLJ_B0889 flavodoxin-like fold domain protein; PFAM: Flavodoxin-like fold; SPTR: Flavodoxin-like fold domain protein; IMG reference gene:2503957267; PFAM: Flavodoxin-like fold; NAD(P)H dehydrogenase (quinone) complement(1113338..1113928) Sphaerochaeta coccoides DSM 17374 10495278 YP_004411570.1 CDS Spico_0964 NC_015436.1 1114496 1117318 R COGs: COG0737 5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterase; InterPro IPR004843:IPR008334; KEGG: ppy:PPE_01086 5'-nucleotidase/2',3'-cyclic phosphodiesterase; PFAM: 5'-Nucleotidase, C-terminal; Metallo-dependent phosphatase; PRIAM: 5'-nucleotidase; SPTR: 5'-nucleotidase/2',3'-cyclic phosphodiesterase; IMG reference gene:2503957269; PFAM: Calcineurin-like phosphoesterase; 5'-nucleotidase, C-terminal domain; 5'-nucleotidase complement(1114496..1117318) Sphaerochaeta coccoides DSM 17374 10495280 YP_004411571.1 CDS Spico_0965 NC_015436.1 1117587 1117757 R KEGG: ssm:Spirs_2236 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957270; hypothetical protein complement(1117587..1117757) Sphaerochaeta coccoides DSM 17374 10495281 YP_004411572.1 CDS Spico_0966 NC_015436.1 1117826 1118263 D COGs: COG0759 conserved hypothetical protein; HAMAP: Protein of unknown function DUF37; InterPro IPR002696; KEGG: lbu:LBUL_0647 hypothetical protein; PFAM: Protein of unknown function DUF37; SPTR: UPF0161 protein HMPREF0044_0040; TIGRFAM: Protein of unknown function DUF37; IMG reference gene:2503957271; PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein YidD; hypothetical protein 1117826..1118263 Sphaerochaeta coccoides DSM 17374 10495282 YP_004411573.1 CDS Spico_0967 NC_015436.1 1118238 1118855 R COGs: COG0572 Uridine kinase; HAMAP: Uridine kinase; InterPro IPR000764:IPR006083; KEGG: ssm:Spirs_2239 uridine kinase; PFAM: Phosphoribulokinase/uridine kinase; SPTR: Uridine kinase; TIGRFAM: Uridine kinase; IMG reference gene:2503957272; PFAM: Phosphoribulokinase / Uridine kinase; TIGRFAM: uridine kinase; uridine kinase complement(1118238..1118855) Sphaerochaeta coccoides DSM 17374 10495283 YP_004411574.1 CDS Spico_0968 NC_015436.1 1118858 1119934 R COGs: COG2017 Galactose mutarotase; InterPro IPR008183; KEGG: sta:STHERM_c02560 aldose 1-epimerase; PFAM: Aldose 1-epimerase; PRIAM: Aldose 1-epimerase; SPTR: Aldose 1-epimerase; manually curated; IMG reference gene:2503957273; PFAM: Aldose 1-epimerase; aldose 1-epimerase complement(1118858..1119934) Sphaerochaeta coccoides DSM 17374 10495284 YP_004411575.1 CDS Spico_0969 NC_015436.1 1119989 1121809 R COGs: COG0481 Membrane GTPase LepA; HAMAP: GTP-binding protein LepA; InterProIPR006297:IPR000795:IPR004161:IPR000640:IPR 013842:IPR005225; KEGG: ssm:Spirs_1828 GTP-binding protein LepA; PFAM: GTP-binding protein LepA, C-terminal; Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; SPTR: GTP-binding protein lepA; TIGRFAM: GTP-binding protein LepA; Small GTP-binding protein; IMG reference gene:2503957274; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain; GTP-binding protein LepA complement(1119989..1121809) Sphaerochaeta coccoides DSM 17374 10495285 YP_004411576.1 CDS Spico_0970 NC_015436.1 1121817 1123793 R COGs: COG0465 ATP-dependent Zn protease; InterProIPR011546:IPR003959:IPR000642:IPR005936:IPR 003593; KEGG: ssm:Spirs_1817 ATP-dependent metalloprotease FtsH; PFAM: Peptidase M41; ATPase, AAA-type, core; Peptidase M41, FtsH extracellular; PRIAM: Microtubule-severing ATPase; SMART: ATPase, AAA+ type, core; SPTR: Cell division protease FtsH; TIGRFAM: Peptidase M41, FtsH; IMG reference gene:2503957275; PFAM: FtsH Extracellular; Peptidase M41; ATPase associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH; membrane protease FtsH catalytic subunit complement(1121817..1123793) Sphaerochaeta coccoides DSM 17374 10495286 YP_004411577.1 CDS Spico_0971 NC_015436.1 1123783 1125282 R COGs: COG0037 ATPase of the PP-loop superfamily protein implicated in cell cycle control; HAMAP: Lysidine-tRNA(Ile) synthetase; InterPro IPR012094:IPR011063:IPR012795:IPR012796; KEGG: ssm:Spirs_1816 tRNA(Ile)-lysidine synthetase; PFAM: tRNA(Ile)-lysidine/2-thiocytidine synthase; SMART: Lysidine-tRNA(Ile) synthetase, C-terminal; SPTR: tRNA(Ile)-lysidine synthase; TIGRFAM: Lysidine-tRNA(Ile) synthetase, N-terminal; Lysidine-tRNA(Ile) synthetase, C-terminal; IMG reference gene:2503957276; PFAM: PP-loop family; TIGRFAM: tRNA(Ile)-lysidine synthetase, C-terminal domain; tRNA(Ile)-lysidine synthetase, N-terminal domain; tRNA(Ile)-lysidine synthase complement(1123783..1125282) Sphaerochaeta coccoides DSM 17374 10495287 YP_004411578.1 CDS Spico_0972 NC_015436.1 1125254 1125832 R COGs: COG0193 Peptidyl-tRNA hydrolase; InterPro IPR001328; KEGG: ssm:Spirs_1815 peptidyl-tRNA hydrolase; PFAM: Peptidyl-tRNA hydrolase; PRIAM: Aminoacyl-tRNA hydrolase; SPTR: Peptidyl-tRNA hydrolase; TIGRFAM: Peptidyl-tRNA hydrolase; IMG reference gene:2503957277; PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase complement(1125254..1125832) Sphaerochaeta coccoides DSM 17374 10495288 YP_004411579.1 CDS Spico_0973 NC_015436.1 1125865 1126497 R COGs: COG1825 Ribosomal protein L25 (general stress protein Ctc); HAMAP: Ribosomal protein L25, long-form; InterPro IPR001021:IPR020055; KEGG: tde:TDE1340 50S ribosomal protein L25/general stress protein Ctc; PFAM: Ribosomal protein L25, short-form; SPTR: 50S ribosomal protein L25; TIGRFAM: Ribosomal protein L25, long-form; IMG reference gene:2503957278; PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form; 50S ribosomal protein L25 complement(1125865..1126497) Sphaerochaeta coccoides DSM 17374 10495289 YP_004411580.1 CDS Spico_0974 NC_015436.1 1126672 1127604 R COGs: COG2768 Uncharacterized Fe-S center protein; KEGG: afn:Acfer_0536 uncharacterized Fe-S center protein; SPTR: uncharacterized protein; manually curated; IMG reference gene:2503957279; Fe-S center protein complement(1126672..1127604) Sphaerochaeta coccoides DSM 17374 10495290 YP_004411581.1 CDS Spico_0975 NC_015436.1 1128044 1128334 R COGs: COG2088 Uncharacterized protein involved in the regulation of septum location; HAMAP: septation protein spoVG; InterPro IPR007170; KEGG: ccb:Clocel_3809 SpoVG family protein; PFAM: Sporulation stage V, protein G; SPTR: SpoVG family protein; IMG reference gene:2503957281; PFAM: SpoVG; septation protein spoVG complement(1128044..1128334) Sphaerochaeta coccoides DSM 17374 10495292 YP_004411582.1 CDS Spico_0976 NC_015436.1 1128383 1129336 R COGs: COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase; HAMAP: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; InterPro IPR004424:IPR006204; KEGG: sta:STHERM_c10370 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; SPTR: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; IMG reference gene:2503957282; PFAM: GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase complement(1128383..1129336) Sphaerochaeta coccoides DSM 17374 10495293 YP_004411583.1 CDS Spico_0977 NC_015436.1 1129300 1130070 R InterPro IPR005122; KEGG: azo:azo3976 uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase-like; SPTR: Probable uracil-DNA glycosylase; IMG reference gene:2503957283; PFAM: Uracil DNA glycosylase superfamily; uracil-DNA glycosylase complement(1129300..1130070) Sphaerochaeta coccoides DSM 17374 10495294 YP_004411584.1 CDS Spico_0978 NC_015436.1 1130357 1132105 D COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR000873; KEGG: ssm:Spirs_3134 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Long-chain-fatty-acid--CoA ligase; SPTR: long-chain-fatty-acid--CoA ligase; IMG reference gene:2503957284; PFAM: AMP-binding enzyme; long-chain-fatty-acid--CoA ligase 1130357..1132105 Sphaerochaeta coccoides DSM 17374 10495295 YP_004411585.1 CDS Spico_0979 NC_015436.1 1132166 1133452 D COGs: COG0402 Cytosine deaminase and related metal-dependent hydrolase; InterPro IPR006680; KEGG: ssm:Spirs_1424 amidohydrolase; PFAM: Amidohydrolase 1; PRIAM: S-adenosylhomocysteine deaminase; SPTR: Amidohydrolase; IMG reference gene:2503957285; PFAM: Amidohydrolase; S-adenosylhomocysteine deaminase 1132166..1133452 Sphaerochaeta coccoides DSM 17374 10495296 YP_004411586.1 CDS Spico_0980 NC_015436.1 1133585 1134841 R COGs: COG0162 Tyrosyl-tRNA synthetase; HAMAP: Tyrosyl-tRNA synthetase, class Ib; InterPro IPR002307:IPR002305; KEGG: ssm:Spirs_3153 tyrosyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib; PRIAM: Tyrosine--tRNA ligase; SPTR: Tyrosyl-tRNA synthetase; TIGRFAM: Tyrosyl-tRNA synthetase, class Ib; IMG reference gene:2503957286; PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase; tyrosyl-tRNA synthetase complement(1133585..1134841) Sphaerochaeta coccoides DSM 17374 10495297 YP_004411587.1 CDS Spico_0981 NC_015436.1 1134843 1136177 R COGs: COG0423 Glycyl-tRNA synthetase (class II); InterPro IPR002314:IPR004154:IPR002315; KEGG: ssm:Spirs_3154 glycyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Anticodon-binding; SPTR: Glycyl-tRNA synthetase; TIGRFAM: Glycyl-tRNA synthetase, alpha2 dimer; IMG reference gene:2503957287; PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: glycyl-tRNA synthetase, dimeric type; glycyl-tRNA synthetase complement(1134843..1136177) Sphaerochaeta coccoides DSM 17374 10495298 YP_004411588.1 CDS Spico_0982 NC_015436.1 1136170 1137663 R COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; InterPro IPR020058:IPR004527; KEGG: ssm:Spirs_3155 glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; PRIAM: Glutamate--tRNA ligase; SPTR: Glutamyl-tRNA synthetase; TIGRFAM: Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial; IMG reference gene:2503957288; PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family; glutamyl-tRNA synthetase complement(1136170..1137663) Sphaerochaeta coccoides DSM 17374 10495299 YP_004411589.1 CDS Spico_0983 NC_015436.1 1137753 1138583 R COGs: COG1647 Esterase/lipase; KEGG: pmo:Pmob_0119 carboxylesterase, SPTR: Carboxylesterase, ; IMG reference gene:2503957289; hypothetical protein complement(1137753..1138583) Sphaerochaeta coccoides DSM 17374 10495300 YP_004411590.1 CDS Spico_0984 NC_015436.1 1138587 1139486 R COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792; KEGG: bpo:BP951000_1223 two-component system regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; SPTR: Two-component system regulator; IMG reference gene:2503957290; PFAM: Bacterial regulatory proteins, luxR family; LuxR family transcriptional regulator complement(1138587..1139486) Sphaerochaeta coccoides DSM 17374 10495301 YP_004411591.1 CDS Spico_0985 NC_015436.1 1139495 1140136 R KEGG: lsp:Bsph_1275 abortive phage resistance protein, SPTR: Abortive phage resistance protein, ; IMG reference gene:2503957291; hypothetical protein complement(1139495..1140136) Sphaerochaeta coccoides DSM 17374 10495302 YP_004411592.1 CDS Spico_0986 NC_015436.1 1140126 1141388 R KEGG: cyh:Cyan8802_0995 RloA protein; SPTR: RloA protein; IMG reference gene:2503957292; hypothetical protein complement(1140126..1141388) Sphaerochaeta coccoides DSM 17374 10495303 YP_004411593.1 CDS Spico_0987 NC_015436.1 1141762 1142832 R KEGG: ssm:Spirs_0126 hypothetical protein; SPTR: Vacuolar protein sorting-associated protein 13 family protein; IMG reference gene:2503957293; hypothetical protein complement(1141762..1142832) Sphaerochaeta coccoides DSM 17374 10495304 YP_004411594.1 CDS Spico_0988 NC_015436.1 1143071 1143358 D KEGG: bwe:BcerKBAB4_5427 ATPase; SPTR: Aspartic acid-rich protein aspolin2-2; IMG reference gene:2503957294; ATPase 1143071..1143358 Sphaerochaeta coccoides DSM 17374 10495305 YP_004411595.1 CDS Spico_0989 NC_015436.1 1143746 1146121 D COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Listeria/Bacterioides repeat; SPTR: Alpha-tubulin suppressor and related RCC1 domain-containing protein-like protein; IMG reference gene:2503957295; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; hypothetical protein 1143746..1146121 Sphaerochaeta coccoides DSM 17374 10495306 YP_004411596.1 CDS Spico_0991 NC_015436.1 1146757 1147770 D COGs: COG2984 ABC-type uncharacterized transport system periplasmic component; InterPro IPR007487; KEGG: gem:GM21_0736 protein of unknown function DUF534; PFAM: ABC transporter substrate binding protein; SPTR: uncharacterized protein; IMG reference gene:2503957297; PFAM: ABC transporter substrate binding protein; ABC transporter substrate-binding protein 1146757..1147770 Sphaerochaeta coccoides DSM 17374 10495308 YP_004411597.1 CDS Spico_0992 NC_015436.1 1147920 1148942 D COGs: COG2984 ABC-type uncharacterized transport system periplasmic component; InterPro IPR007487; KEGG: dat:HRM2_37760 ABC-type transporter, periplasmic substrate binding protein; PFAM: ABC transporter substrate binding protein; SPTR: ABC-type transporter, periplasmic substrate binding protein; IMG reference gene:2503957298; PFAM: ABC transporter substrate binding protein; ABC transporter substrate-binding protein 1147920..1148942 Sphaerochaeta coccoides DSM 17374 10495309 YP_004411598.1 CDS Spico_0993 NC_015436.1 1148968 1149981 D COGs: COG2984 ABC-type uncharacterized transport system periplasmic component; InterPro IPR007487; KEGG: gsu:GSU0210 hypothetical protein; PFAM: ABC transporter substrate binding protein; SPTR: uncharacterized protein; IMG reference gene:2503957299; PFAM: ABC transporter substrate binding protein; ABC transporter substrate-binding protein 1148968..1149981 Sphaerochaeta coccoides DSM 17374 10495310 YP_004411599.1 CDS Spico_0994 NC_015436.1 1150062 1151024 D COGs: COG4120 ABC-type uncharacterized transport system permease component; InterPro IPR001851; KEGG: dat:HRM2_37770 ABC-type transporter, permease component; PFAM: ABC transporter permease; SPTR: ABC-type transporter, permease component; IMG reference gene:2503957300; PFAM: Branched-chain amino acid transport system / permease component; inner-membrane translocator 1150062..1151024 Sphaerochaeta coccoides DSM 17374 10495311 YP_004411600.1 CDS Spico_0995 NC_015436.1 1151017 1151805 D COGs: COG1101 ABC-type uncharacterized transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: gbm:Gbem_0725 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; IMG reference gene:2503957301; PFAM: ABC transporter; phosphonate-transporting ATPase 1151017..1151805 Sphaerochaeta coccoides DSM 17374 10495312 YP_004411601.1 CDS Spico_0996 NC_015436.1 1151845 1153206 D COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: cpy:Cphy_1252 MATE efflux family protein; PFAM: Multi antimicrobial extrusion protein; SPTR: efflux protein, MATE family; TIGRFAM: Multi antimicrobial extrusion protein; IMG reference gene:2503957302; PFAM: MatE; TIGRFAM: efflux protein, MATE family; MATE efflux family protein 1151845..1153206 Sphaerochaeta coccoides DSM 17374 10495313 YP_004411602.1 CDS Spico_0997 NC_015436.1 1153253 1153636 R COGs: COG0799 Iojap protein; InterPro IPR004394; KEGG: ssm:Spirs_1809 iojap-related protein; PFAM: Ribosome-associated, Iojap-like; SPTR: Iojap domain protein; TIGRFAM: Ribosome-associated, Iojap-like; IMG reference gene:2503957303; PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein; iojap family protein complement(1153253..1153636) Sphaerochaeta coccoides DSM 17374 10495314 YP_004411603.1 CDS Spico_0998 NC_015436.1 1153633 1154298 R KEGG: cpi:Cpin_5296 beta-ketoacyl synthase; SPTR: Central motor kinesin 1; IMG reference gene:2503957304; hypothetical protein complement(1153633..1154298) Sphaerochaeta coccoides DSM 17374 10495315 YP_004411604.1 CDS Spico_0999 NC_015436.1 1154295 1154897 R COGs: COG1713 HD superfamily hydrolase involved in NAD metabolism; InterPro IPR006674; KEGG: rxy:Rxyl_2559 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SPTR: Metal dependent phosphohydrolase; IMG reference gene:2503957305; metal dependent phosphohydrolase complement(1154295..1154897) Sphaerochaeta coccoides DSM 17374 10495316 YP_004411605.1 CDS Spico_1000 NC_015436.1 1154866 1155507 R COGs: COG1057 Nicotinic acid mononucleotide adenylyltransferase; HAMAP: Probable nicotinate-nucleotide adenylyltransferase; InterPro IPR005248:IPR004820:IPR004821; KEGG: tpp:TPASS_0741 hypothetical protein; PFAM: Cytidylyltransferase; SPTR: Probable nicotinate-nucleotide adenylyltransferase; TIGRFAM: Probable nicotinate-nucleotide adenylyltransferase; Cytidyltransferase-related; IMG reference gene:2503957306; PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain; nicotinate-nucleotide adenylyltransferase complement(1154866..1155507) Sphaerochaeta coccoides DSM 17374 10495317 YP_004411606.1 CDS Spico_1001 NC_015436.1 1155529 1156623 R COGs: COG0536 GTPase; HAMAP: GTP-binding protein Obg/CgtA; InterPro IPR014100:IPR006169:IPR002917; KEGG: ssm:Spirs_1805 GTP-binding protein Obg/CgtA; PFAM: GTP1/OBG subdomain; GTP-binding protein, HSR1-related; SPTR: GTPase obg; TIGRFAM: GTP-binding protein Obg/CgtA; IMG reference gene:2503957307; PFAM: GTPase of unknown function; GTP1/OBG; TIGRFAM: Obg family GTPase CgtA; GTPase ObgE complement(1155529..1156623) Sphaerochaeta coccoides DSM 17374 10495318 YP_004411607.1 CDS Spico_1002 NC_015436.1 1156665 1156916 R COGs: COG0211 Ribosomal protein L27; HAMAP: Ribosomal protein L27; InterPro IPR001684; KEGG: sta:STHERM_c10280 50S ribosomal protein L27; PFAM: Ribosomal protein L27; SPTR: 50S ribosomal protein L27; TIGRFAM: Ribosomal protein L27; IMG reference gene:2503957308; PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27; 50S ribosomal protein L27 complement(1156665..1156916) Sphaerochaeta coccoides DSM 17374 10495319 YP_004411608.1 CDS Spico_1003 NC_015436.1 1156929 1157246 R COGs: COG0261 Ribosomal protein L21; HAMAP: Ribosomal protein L21; InterPro IPR001787; KEGG: ssm:Spirs_1802 ribosomal protein L21; PFAM: Ribosomal protein L21; SPTR: 50S ribosomal protein L21; TIGRFAM: Ribosomal protein L21; IMG reference gene:2503957309; PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21; 50S ribosomal protein L21 complement(1156929..1157246) Sphaerochaeta coccoides DSM 17374 10495320 YP_004411609.1 CDS Spico_1004 NC_015436.1 1157430 1158017 D InterPro IPR001647; KEGG: mpd:MCP_0597 TetR family transcriptional regulator; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator; IMG reference gene:2503957310; PFAM: Bacterial regulatory proteins, tetR family; TetR family transcriptional regulator 1157430..1158017 Sphaerochaeta coccoides DSM 17374 10495321 YP_004411610.1 CDS Spico_1005 NC_015436.1 1158032 1159795 R COGs: COG0018 Arginyl-tRNA synthetase; HAMAP: Arginyl-tRNA synthetase, class Ic; InterPro IPR001278:IPR005148:IPR015945:IPR008909; KEGG: ssm:Spirs_1801 arginyl-tRNA synthetase; PFAM: Arginyl-tRNA synthetase, class Ic, core; Arginyl tRNA synthetase, class Ic, N-terminal; DALR anticodon binding; PRIAM: Arginine--tRNA ligase; SMART: DALR anticodon binding; SPTR: uncharacterized protein; TIGRFAM: Arginyl-tRNA synthetase, class Ic; IMG reference gene:2503957311; PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase; arginyl-tRNA synthetase complement(1158032..1159795) Sphaerochaeta coccoides DSM 17374 10495322 YP_004411611.1 CDS Spico_1006 NC_015436.1 1159865 1160851 R COGs: COG0340 Biotin-(acetyl-CoA carboxylase) ligase; InterPro IPR013196:IPR004143:IPR004408; KEGG: cpy:Cphy_2779 biotin--acetyl-CoA-carboxylase ligase; PFAM: Biotin/lipoate A/B protein ligase; Helix-turn-helix, type 11; SPTR: Biotin--acetyl-CoA-carboxylase ligase; TIGRFAM: Biotin--acetyl-CoA-carboxylase ligase; IMG reference gene:2503957312; PFAM: HTH domain; Biotin/lipoate A/B protein ligase; TIGRFAM: BirA biotin operon repressor domain; birA, biotin-[acetyl-CoA-carboxylase] ligase region; biotin--acetyl-CoA-carboxylase ligase complement(1159865..1160851) Sphaerochaeta coccoides DSM 17374 10495323 YP_004411612.1 CDS Spico_1007 NC_015436.1 1161049 1161627 D COGs: COG1268 conserved hypothetical protein; InterPro IPR003784; KEGG: sta:STHERM_c14470 biotin synthesis protein BioY; PFAM: BioY protein; SPTR: Biotin synthesis protein BioY; IMG reference gene:2503957313; PFAM: BioY family; BioY protein 1161049..1161627 Sphaerochaeta coccoides DSM 17374 10495324 YP_004411613.1 CDS Spico_1008 NC_015436.1 1161675 1162634 D COGs: COG1045 Serine acetyltransferase; InterPro IPR001451; KEGG: ssm:Spirs_1684 serine O-acetyltransferase; PFAM: Bacterial transferase hexapeptide repeat; PRIAM: Serine O-acetyltransferase; SPTR: uncharacterized protein; IMG reference gene:2503957314; TIGRFAM: serine O-acetyltransferase; Serine O-acetyltransferase 1161675..1162634 Sphaerochaeta coccoides DSM 17374 10495325 YP_004411614.1 CDS Spico_1009 NC_015436.1 1162665 1164026 R COGs: COG0621 2-methylthioadenine synthetase; InterProIPR013848:IPR007197:IPR005839:IPR006467:IPR 006638; KEGG: ssm:Spirs_1516 MiaB-like tRNA modifying enzyme; PFAM: Radical SAM; Methylthiotransferase, N-terminal; SMART: Elongator protein 3/MiaB/NifB; SPTR: uncharacterized protein; TIGRFAM: MiaB-like tRNA modifying enzyme; Methylthiotransferase; IMG reference gene:2503957315; PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme; radical SAM methylthiotransferase, MiaB/RimO family; MiaB-like tRNA modifying enzyme complement(1162665..1164026) Sphaerochaeta coccoides DSM 17374 10495326 YP_004411615.1 CDS Spico_1010 NC_015436.1 1164023 1164838 R COGs: COG0287 Prephenate dehydrogenase; InterPro IPR003099; KEGG: ssm:Spirs_1513 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase; SPTR: Arogenate dehydrogenase 2; IMG reference gene:2503957316; PFAM: Prephenate dehydrogenase; prephenate dehydrogenase complement(1164023..1164838) Sphaerochaeta coccoides DSM 17374 10495327 YP_004411616.1 CDS Spico_1011 NC_015436.1 1164956 1165954 D COGs: COG0280 Phosphotransacetylase; InterPro IPR002505:IPR004614; KEGG: ssm:Spirs_1512 phosphate acetyltransferase; PFAM: Phosphate acetyl/butaryl transferase; PRIAM: Phosphate acetyltransferase; SPTR: Phosphate acetyltransferase; TIGRFAM: Phosphate acetyltransferase; IMG reference gene:2503957317; PFAM: Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate acetyltransferase; phosphotransacetylase 1164956..1165954 Sphaerochaeta coccoides DSM 17374 10495328 YP_004411617.1 CDS Spico_1012 NC_015436.1 1166317 1167762 D COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: cac:CA_C3444 cation efflux pump (multidrug resistance protein); PFAM: Multi antimicrobial extrusion protein; SPTR: uncharacterized protein; TIGRFAM: Multi antimicrobial extrusion protein; IMG reference gene:2503957318; PFAM: MatE; TIGRFAM: efflux protein, MATE family; MATE efflux family protein 1166317..1167762 Sphaerochaeta coccoides DSM 17374 10495329 YP_004411618.1 CDS Spico_1013 NC_015436.1 1167746 1168621 R COGs: COG0030 Dimethyladenosine transferase (rRNA methylation); HAMAP: Ribosomal RNA adenine dimethylase; InterPro IPR011530:IPR001737:IPR020598; KEGG: tde:TDE1080 dimethyladenosine transferase; PFAM: Ribosomal RNA adenine methylase transferase; SMART: Ribosomal RNA adenine methylase transferase, N-terminal; SPTR: Ribosomal RNA small subunit methyltransferase A; TIGRFAM: Ribosomal RNA adenine dimethylase; IMG reference gene:2503957319; PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase; ribosomal RNA small subunit methyltransferase A complement(1167746..1168621) Sphaerochaeta coccoides DSM 17374 10495330 YP_004411619.1 CDS Spico_1015 NC_015436.1 1169749 1169997 D KEGG: mcc:698537 one cut homeobox 2; SPTR: uncharacterized protein; manually curated; IMG reference gene:2503957321; hypothetical protein 1169749..1169997 Sphaerochaeta coccoides DSM 17374 10495332 YP_004411620.1 CDS Spico_1016 NC_015436.1 1170288 1171073 R KEGG: ssm:Spirs_1495 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957322; hypothetical protein complement(1170288..1171073) Sphaerochaeta coccoides DSM 17374 10495333 YP_004411621.1 CDS Spico_1017 NC_015436.1 1171098 1172870 R COGs: COG1109 Phosphomannomutase; InterPro IPR005844:IPR005845; KEGG: sta:STHERM_c11950 hypothetical protein; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; SPTR: uncharacterized protein; IMG reference gene:2503957323; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I complement(1171098..1172870) Sphaerochaeta coccoides DSM 17374 10495334 YP_004411622.1 CDS Spico_1018 NC_015436.1 1172857 1173540 R COGs: COG0546 phosphatase; InterPro IPR005834; KEGG: apv:Apar_0414 HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; PRIAM: Phosphoglycolate phosphatase; SPTR: Phosphoglycolate phosphatase; IMG reference gene:2503957324; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 2-phosphoglycolate phosphatase, prokaryotic; phosphoglycolate phosphatase complement(1172857..1173540) Sphaerochaeta coccoides DSM 17374 10495335 YP_004411623.1 CDS Spico_1019 NC_015436.1 1173744 1175009 D COGs: COG1092 SAM-dependent methyltransferase; KEGG: phe:Phep_4225 PUA domain containing protein; SPTR: PUA domain containing protein; IMG reference gene:2503957325; PFAM: S-adenosylmethionine-dependent methyltransferase; PUA domain containing protein 1173744..1175009 Sphaerochaeta coccoides DSM 17374 10495336 YP_004411624.1 CDS Spico_1020 NC_015436.1 1175035 1175697 R InterPro IPR005358; KEGG: tde:TDE0847 hypothetical protein; PFAM: Uncharacterised protein family UPF0153; SPTR: uncharacterized protein; IMG reference gene:2503957326; PFAM: Uncharacterised protein family (UPF0153); hypothetical protein complement(1175035..1175697) Sphaerochaeta coccoides DSM 17374 10495337 YP_004411625.1 CDS Spico_1021 NC_015436.1 1175788 1176813 R COGs: COG0598 Mg2+ and Co2+ transporter; InterPro IPR002523; KEGG: cce:Ccel_2001 Mg2 transporter protein CorA family protein; PFAM: Mg2+ transporter protein, CorA-like; SPTR: Mg2 transporter protein CorA family protein; IMG reference gene:2503957327; PFAM: CorA-like Mg2+ transporter protein; Mg2 transporter protein CorA family protein complement(1175788..1176813) Sphaerochaeta coccoides DSM 17374 10495338 YP_004411626.1 CDS Spico_1022 NC_015436.1 1177217 1177774 D COGs: COG2316 hydrolase (HD superfamily); InterPro IPR006674:IPR006675; KEGG: ttm:Tthe_2220 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SPTR: Metal dependent phosphohydrolase; TIGRFAM: Uncharacterised protein family HDIG; IMG reference gene:2503957328; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG; metal dependent phosphohydrolase 1177217..1177774 Sphaerochaeta coccoides DSM 17374 10495339 YP_004411627.1 CDS Spico_1023 NC_015436.1 1177771 1177926 D KEGG: hmg:100201846 similar to predicted protein; IMG reference gene:2503957329; hypothetical protein 1177771..1177926 Sphaerochaeta coccoides DSM 17374 10495340 YP_004411628.1 CDS Spico_1024 NC_015436.1 1178025 1178324 D IMG reference gene:2503957330; hypothetical protein 1178025..1178324 Sphaerochaeta coccoides DSM 17374 10495341 YP_004411629.1 CDS Spico_1025 NC_015436.1 1178257 1179339 R COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase; KEGG: tde:TDE2107 dihydroorotase, SPTR: Dihydroorotase, ; IMG reference gene:2503957331; dihydroorotase complement(1178257..1179339) Sphaerochaeta coccoides DSM 17374 10495342 YP_004411630.1 CDS Spico_1026 NC_015436.1 1179336 1181132 R COGs: COG0167 Dihydroorotate dehydrogenase; InterPro IPR012135:IPR008333:IPR001433:IPR005720; KEGG: tde:TDE0982 dihydroorotate dehydrogenase/oxidoreductase, FAD-binding; PFAM: Dihydroorotate dehydrogenase, class 1/ 2; Oxidoreductase, FAD-binding domain; Oxidoreductase FAD/NAD(P)-binding; SPTR: Dihydroorotate dehydrogenase/oxidoreductase, FAD-binding; TIGRFAM: Dihydroorotate dehydrogenase, class 1; IMG reference gene:2503957332; PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase (subfamily 1) family protein; dihydroorotate dehydrogenase complement(1179336..1181132) Sphaerochaeta coccoides DSM 17374 10495343 YP_004411631.1 CDS Spico_1027 NC_015436.1 1181129 1182067 R COGs: COG0284 Orotidine-5'-phosphate decarboxylase; InterPro IPR001754:IPR011995; KEGG: ssm:Spirs_1435 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase domain; PRIAM: Orotidine-5'-phosphate decarboxylase; SMART: Orotidine 5'-phosphate decarboxylase domain; SPTR: Orotidine 5'-phosphate decarboxylase; TIGRFAM: Orotidine 5'-phosphate decarboxylase, type 2; IMG reference gene:2503957333; PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 2; orotidine 5'-phosphate decarboxylase complement(1181129..1182067) Sphaerochaeta coccoides DSM 17374 10495344 YP_004411632.1 CDS Spico_1028 NC_015436.1 1182045 1182737 R COGs: COG0461 Orotate phosphoribosyltransferase; InterPro IPR000836:IPR004467; KEGG: tde:TDE1001 orotate phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; SPTR: Orotate phosphoribosyltransferase; TIGRFAM: Orotate phosphoribosyl transferase, clade 1; IMG reference gene:2503957334; PFAM: Phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase; orotate phosphoribosyltransferase complement(1182045..1182737) Sphaerochaeta coccoides DSM 17374 10495345 YP_004411633.1 CDS Spico_1029 NC_015436.1 1182734 1184350 R COGs: COG0540 Aspartate carbamoyltransferase catalytic chain; InterPro IPR006132:IPR006131:IPR002082; KEGG: tde:TDE0129 bifunctional aspartate carbamoyltransferase catalytic subunit/aspartate carbamoyltransferase regulatory subunit; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain; PRIAM: Aspartate carbamoyltransferase; SPTR: Protein pyrBI; TIGRFAM: Aspartate carbamoyltransferase, eukaryotic; IMG reference gene:2503957335; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; Aspartate carbamoyltransferase regulatory chain, metal binding domain; Aspartate carbamoyltransferase regulatory chain, allosteric domain; TIGRFAM: aspartate carbamoyltransferase; aspartate carbamoyltransferase complement(1182734..1184350) Sphaerochaeta coccoides DSM 17374 10495346 YP_004411634.1 CDS Spico_1030 NC_015436.1 1184751 1185233 D COGs: COG2606 conserved hypothetical protein; InterPro IPR007214:IPR004369; KEGG: ssm:Spirs_3308 YbaK/EbsC protein; PFAM: YbaK/aminoacyl-tRNA synthetase-associated domain; SPTR: YbaK/ebsC protein; TIGRFAM: Prolyl-tRNA editing protein, YbaK/EbsC; IMG reference gene:2503957336; PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein; ybaK/ebsC protein 1184751..1185233 Sphaerochaeta coccoides DSM 17374 10495347 YP_004411635.1 CDS Spico_1031 NC_015436.1 1185257 1185931 R COGs: COG0546 phosphatase; InterPro IPR005834:IPR006439; KEGG: rha:RHA1_ro01185 phosphoglycolate phosphatase; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: Phosphoglycolate phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; IMG reference gene:2503957337; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; HAD-superfamily hydrolase complement(1185257..1185931) Sphaerochaeta coccoides DSM 17374 10495348 YP_004411636.1 CDS Spico_1033 NC_015436.1 1186164 1187762 R KEGG: ank:AnaeK_1538 sec-C motif domain protein; SPTR: SEC-C motif domain protein; IMG reference gene:2503957339; hypothetical protein complement(1186164..1187762) Sphaerochaeta coccoides DSM 17374 10495350 YP_004411637.1 CDS Spico_1034 NC_015436.1 1187755 1188270 R COGs: COG3467 flavin-nucleotide-binding protein; InterPro IPR011576; KEGG: ctc:CTC00899 5-nitroimidazole antibiotic resistance protein; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; SPTR: Predicted flavin-nucleotide-binding protein; IMG reference gene:2503957340; PFAM: Pyridoxamine 5'-phosphate oxidase; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(1187755..1188270) Sphaerochaeta coccoides DSM 17374 10495351 YP_004411638.1 CDS Spico_1035 NC_015436.1 1188332 1189582 R COGs: COG4277 DNA-binding protein with the Helix-hairpin-helix motif; InterPro IPR007197; KEGG: tjr:TherJR_1012 radical SAM domain protein; PFAM: Radical SAM; SPTR: Helix-hairpin-helix motif protein; IMG reference gene:2503957341; radical SAM protein complement(1188332..1189582) Sphaerochaeta coccoides DSM 17374 10495352 YP_004411639.1 CDS Spico_1036 NC_015436.1 1189679 1190095 D COGs: COG0432 conserved hypothetical protein; InterPro IPR001602; KEGG: chy:CHY_0024 hypothetical protein; PFAM: Uncharacterised protein family UPF0047; SPTR: uncharacterized protein; TIGRFAM: Uncharacterised protein family UPF0047; IMG reference gene:2503957342; PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme; hypothetical protein 1189679..1190095 Sphaerochaeta coccoides DSM 17374 10495353 YP_004411640.1 CDS Spico_1037 NC_015436.1 1190265 1191254 R COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: gka:GK1893 sugar ABC transporter (permease); PFAM: ABC transporter permease; SPTR: Monosaccharide-transporting ATPase; IMG reference gene:2503957343; PFAM: Branched-chain amino acid transport system / permease component; inner-membrane translocator complement(1190265..1191254) Sphaerochaeta coccoides DSM 17374 10495354 YP_004411641.1 CDS Spico_1038 NC_015436.1 1191257 1192762 R COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: str:Sterm_4010 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; IMG reference gene:2503957344; PFAM: ABC transporter; monosaccharide ABC transporter ATP-binding protein, CUT2 family complement(1191257..1192762) Sphaerochaeta coccoides DSM 17374 10495355 YP_004411642.1 CDS Spico_1039 NC_015436.1 1192856 1193866 R COGs: COG1879 ABC-type sugar transport system periplasmic component; KEGG: gka:GK1896 sugar ABC transporter (sugar-binding protein); SPTR: Periplasmic binding protein/LacI transcriptional regulator; IMG reference gene:2503957345; PFAM: family; sugar ABC transporter substrate-binding protein complement(1192856..1193866) Sphaerochaeta coccoides DSM 17374 10495356 YP_004411643.1 CDS Spico_1040 NC_015436.1 1193910 1194869 R COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: rca:Rcas_0181 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; IMG reference gene:2503957346; PFAM: NAD dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(1193910..1194869) Sphaerochaeta coccoides DSM 17374 10495357 YP_004411644.1 CDS Spico_1041 NC_015436.1 1194862 1195587 R COGs: COG2186 Transcriptional regulators; InterPro IPR000524:IPR011711; KEGG: rxy:Rxyl_0539 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; SPTR: GntR domain protein; IMG reference gene:2503957347; PFAM: Bacterial regulatory proteins, gntR family; FCD domain; GntR family transcriptional regulator complement(1194862..1195587) Sphaerochaeta coccoides DSM 17374 10495358 YP_004411645.1 CDS Spico_1042 NC_015436.1 1195584 1196354 R COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: pjd:Pjdr2_0308 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Short-chain dehydrogenase/reductase SDR; IMG reference gene:2503957348; PFAM: short chain dehydrogenase; 3-oxoacyl-ACP reductase complement(1195584..1196354) Sphaerochaeta coccoides DSM 17374 10495359 YP_004411646.1 CDS Spico_1043 NC_015436.1 1196369 1197172 R COGs: COG3246 conserved hypothetical protein; InterPro IPR008567; KEGG: sth:STH64 hypothetical protein; PFAM: Protein of unknown function DUF849, prokaryotic; SPTR: uncharacterized protein; IMG reference gene:2503957349; PFAM: Prokaryotic protein of unknown function (DUF849); hypothetical protein complement(1196369..1197172) Sphaerochaeta coccoides DSM 17374 10495360 YP_004411647.1 CDS Spico_1044 NC_015436.1 1197192 1199978 R COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104:IPR000587:IPR000994; KEGG: csh:Closa_3838 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; Creatinase; Peptidase M24, structural domain; SPTR: Oxidoreductase domain protein; IMG reference gene:2503957350; PFAM: Oxidoreductase, NAD-binding Rossmann fold; Oxidoreductase, C-terminal alpha/beta domain; Metallopeptidase M24; Creatinase/Prolidase N-terminal domain; oxidoreductase domain-containing protein complement(1197192..1199978) Sphaerochaeta coccoides DSM 17374 10495361 YP_004411648.1 CDS Spico_1045 NC_015436.1 1200428 1201627 R COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: aco:Amico_0368 aminotransferase class I and II; PFAM: Aminotransferase, class I/classII; PRIAM: Aspartate transaminase; SPTR: alanine transaminase (Class-I pyridoxal-phosphate-dependent aminotransferase) (AlaT/patA-like); IMG reference gene:2503957351; PFAM: Aminotransferase class I and II; aspartate transaminase complement(1200428..1201627) Sphaerochaeta coccoides DSM 17374 10495362 YP_004411649.1 CDS Spico_1046 NC_015436.1 1201778 1203076 R COGs: COG0462 Phosphoribosylpyrophosphate synthetase; InterPro IPR000836:IPR005946; KEGG: ssm:Spirs_0557 ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyltransferase; PRIAM: Ribose-phosphate diphosphokinase; SPTR: Phosphoribosylpyrophosphate synthetase; TIGRFAM: Phosphoribosyl pyrophosphokinase; IMG reference gene:2503957352; PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase; ribose-phosphate pyrophosphokinase complement(1201778..1203076) Sphaerochaeta coccoides DSM 17374 10495363 YP_004411650.1 CDS Spico_1047 NC_015436.1 1203186 1204043 R COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: thx:Thet_2162 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: uncharacterized protein; IMG reference gene:2503957353; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein complement(1203186..1204043) Sphaerochaeta coccoides DSM 17374 10495364 YP_004411651.1 CDS Spico_1048 NC_015436.1 1204040 1204942 R COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: tle:Tlet_1227 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: uncharacterized protein; IMG reference gene:2503957354; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein complement(1204040..1204942) Sphaerochaeta coccoides DSM 17374 10495365 YP_004411652.1 CDS Spico_1049 NC_015436.1 1205010 1206272 R COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: tpd:Teth39_0261 extracellular solute-binding protein; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: uncharacterized protein; IMG reference gene:2503957355; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein complement(1205010..1206272) Sphaerochaeta coccoides DSM 17374 10495366 YP_004411653.1 CDS Spico_1050 NC_015436.1 1206276 1208033 R COGs: COG0366 Glycosidase; InterPro IPR004185:IPR006047:IPR006589; KEGG: bse:Bsel_1069 alpha amylase catalytic region; PFAM: Glycosyl hydrolase, family 13, catalytic domain; Glycoside hydrolase, family 13, N-terminal Ig-like domain; PRIAM: Cyclomaltodextrinase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; SPTR: uncharacterized protein; IMG reference gene:2503957356; PFAM: Alpha amylase, N-terminal ig-like domain; Alpha amylase, catalytic domain; cyclomaltodextrinase complement(1206276..1208033) Sphaerochaeta coccoides DSM 17374 10495367 YP_004411654.1 CDS Spico_1051 NC_015436.1 1208026 1209054 R COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: afl:Aflv_2186 transcriptional regulator, LacI family (HTH and periplasmic-binding domains); PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI; SPTR: Transcriptional regulator, LacI family; IMG reference gene:2503957357; PFAM: Bacterial regulatory proteins, lacI family; family; LacI family transcriptional regulator complement(1208026..1209054) Sphaerochaeta coccoides DSM 17374 10495368 YP_004411655.1 CDS Spico_1052 NC_015436.1 1209299 1210672 R COGs: COG0165 Argininosuccinate lyase; InterPro IPR022761:IPR009049; KEGG: ssm:Spirs_3701 argininosuccinate lyase; PFAM: Lyase 1, N-terminal; PRIAM: Argininosuccinate lyase; SPTR: Argininosuccinate lyase; TIGRFAM: Argininosuccinate lyase; IMG reference gene:2503957358; PFAM: Lyase; TIGRFAM: argininosuccinate lyase; argininosuccinate lyase complement(1209299..1210672) Sphaerochaeta coccoides DSM 17374 10495369 YP_004411656.1 CDS Spico_1053 NC_015436.1 1210850 1211902 D KEGG: sta:STHERM_c01870 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957359; hypothetical protein 1210850..1211902 Sphaerochaeta coccoides DSM 17374 10495370 YP_004411657.1 CDS Spico_1054 NC_015436.1 1211890 1212213 R COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR013766:IPR005746; KEGG: sta:STHERM_c01860 thioredoxin; PFAM: Thioredoxin domain; SPTR: Thioredoxin; TIGRFAM: Thioredoxin; IMG reference gene:2503957360; PFAM: Thioredoxin; TIGRFAM: thioredoxin; thioredoxin complement(1211890..1212213) Sphaerochaeta coccoides DSM 17374 10495371 YP_004411658.1 CDS Spico_1055 NC_015436.1 1212365 1212823 R COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR000424:IPR011344; KEGG: ssm:Spirs_3718 single-strand binding protein; PFAM: Primosome PriB/single-strand DNA-binding; SPTR: Single-stranded DNA-binding protein; TIGRFAM: Single-strand DNA-binding; IMG reference gene:2503957361; PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); single-strand binding protein complement(1212365..1212823) Sphaerochaeta coccoides DSM 17374 10495372 YP_004411659.1 CDS Spico_1056 NC_015436.1 1213119 1213811 D COGs: COG0528 Uridylate kinase; InterPro IPR001048:IPR011818; KEGG: tde:TDE2085 uridylate kinase; PFAM: Aspartate/glutamate/uridylate kinase; SPTR: Amino acid kinase; TIGRFAM: Uridylate kinase, archaeal/spirochete, IMG reference gene:2503957362; PFAM: Amino acid kinase; TIGRFAM: uridylate kinase; uridylate kinase 1213119..1213811 Sphaerochaeta coccoides DSM 17374 10495373 YP_004411660.1 CDS Spico_1057 NC_015436.1 1213977 1214951 R COGs: COG1313 Uncharacterized Fe-S protein PflX homolog of pyruvate formate lyase activating protein; InterPro IPR007197; KEGG: ssm:Spirs_3763 radical SAM domain protein; PFAM: Radical SAM; SPTR: Radical SAM domain protein; IMG reference gene:2503957363; radical SAM protein complement(1213977..1214951) Sphaerochaeta coccoides DSM 17374 10495374 YP_004411661.1 CDS Spico_1058 NC_015436.1 1215018 1216280 D COGs: COG3621 Patatin; InterPro IPR002641; KEGG: ssm:Spirs_0041 patatin; PFAM: Patatin/Phospholipase A2-related; SPTR: Patatin family protein; IMG reference gene:2503957364; PFAM: Patatin-like phospholipase; patatin 1215018..1216280 Sphaerochaeta coccoides DSM 17374 10495375 YP_004411662.1 CDS Spico_1059 NC_015436.1 1216272 1217153 R COGs: COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase; InterPro IPR013749; KEGG: hor:Hore_04110 pyridoxamine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; SPTR: Pyridoxal kinase; IMG reference gene:2503957365; PFAM: Phosphomethylpyrimidine kinase; Phosphomethylpyrimidine kinase type-1 complement(1216272..1217153) Sphaerochaeta coccoides DSM 17374 10495376 YP_004411663.1 CDS Spico_1060 NC_015436.1 1217196 1219205 D COGs: COG1109 Phosphomannomutase; InterPro IPR005844; KEGG: ssm:Spirs_2289 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; SPTR: uncharacterized protein; IMG reference gene:2503957366; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I 1217196..1219205 Sphaerochaeta coccoides DSM 17374 10495377 YP_004411664.1 CDS Spico_1061 NC_015436.1 1219233 1220540 R COGs: COG5026 Hexokinase; InterPro IPR022672:IPR022673; KEGG: ssm:Spirs_3985 hexokinase; PFAM: Hexokinase, C-terminal; Hexokinase, N-terminal; PRIAM: Hexokinase; SPTR: uncharacterized protein; IMG reference gene:2503957367; PFAM: Hexokinase; hexokinase complement(1219233..1220540) Sphaerochaeta coccoides DSM 17374 10495378 YP_004411665.1 CDS Spico_1062 NC_015436.1 1220679 1222103 D COGs: COG2925 Exonuclease I; InterPro IPR013520:IPR013620:IPR006055; KEGG: ssm:Spirs_3051 exodeoxyribonuclease I; PFAM: Exonuclease C-terminal; Exonuclease, RNase T/DNA polymerase III; PRIAM: Exodeoxyribonuclease I; SMART: Exonuclease; SPTR: Exodeoxyribonuclease I subunit C; IMG reference gene:2503957368; PFAM: Exonuclease; Exonuclease C-terminal; exodeoxyribonuclease I 1220679..1222103 Sphaerochaeta coccoides DSM 17374 10495379 YP_004411666.1 CDS Spico_1063 NC_015436.1 1222508 1224601 D COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR011110:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; Two component regulator propeller; SPTR: uncharacterized protein; IMG reference gene:2503957369; PFAM: Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 1222508..1224601 Sphaerochaeta coccoides DSM 17374 10495380 YP_004411667.1 CDS Spico_1064 NC_015436.1 1224736 1225929 R COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR004839:IPR011282; KEGG: sro:Sros_8853 glycine C-acetyltransferase; PFAM: Aminotransferase, class I/classII; PRIAM: Glycine C-acetyltransferase; SPTR: Glycine C-acetyltransferase; TIGRFAM: 2-amino-3-ketobutyrate coenzyme A ligase; IMG reference gene:2503957370; PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; 2-amino-3-ketobutyrate coenzyme A ligase; 2-amino-3-ketobutyrate CoA ligase complement(1224736..1225929) Sphaerochaeta coccoides DSM 17374 10495381 YP_004411668.1 CDS Spico_1065 NC_015436.1 1225926 1226888 R COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: bmd:BMD_1541 NAD dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: L-threonine 3-dehydrogenase; SPTR: NAD-dependent epimerase; possible UDP-glucose 4-epimerase; IMG reference gene:2503957371; PFAM: NAD dependent epimerase/dehydratase; L-threonine 3-dehydrogenase complement(1225926..1226888) Sphaerochaeta coccoides DSM 17374 10495382 YP_004411669.1 CDS Spico_1066 NC_015436.1 1227126 1227701 D InterPro IPR001387:IPR013096; KEGG: ssm:Spirs_2303 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; Cupin 2, conserved barrel; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator, XRE family; IMG reference gene:2503957372; PFAM: Cupin domain; Helix-turn-helix; helix-turn-helix domain-containing protein 1227126..1227701 Sphaerochaeta coccoides DSM 17374 10495383 YP_004411670.1 CDS Spico_1067 NC_015436.1 1227829 1229223 D COGs: COG2211 Na+/melibiose symporter and related transporter; InterPro IPR011701; KEGG: tth:TT_P0219 hypothetical protein; PFAM: Major facilitator superfamily MFS-1; SPTR: Predicted protein; IMG reference gene:2503957373; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein 1227829..1229223 Sphaerochaeta coccoides DSM 17374 10495384 YP_004411671.1 CDS Spico_1068 NC_015436.1 1229334 1231538 R COGs: COG3345 Alpha-galactosidase; InterPro IPR000111; KEGG: ere:EUBREC_0489 alpha-galactosidase; PFAM: Glycoside hydrolase, clan GH-D; PRIAM: Alpha-galactosidase; SPTR: uncharacterized protein; IMG reference gene:2503957374; PFAM: Melibiase; alpha-galactosidase complement(1229334..1231538) Sphaerochaeta coccoides DSM 17374 10495385 YP_004411672.1 CDS Spico_1069 NC_015436.1 1231570 1234170 R InterPro IPR019563; KEGG: hje:HacjB3_16901 glycoside hydrolase 97; PFAM: Glycoside hydrolase, family 97; SPTR: Alpha-glucosidase; IMG reference gene:2503957375; PFAM: Glycoside hydrolase 97; glycoside hydrolase complement(1231570..1234170) Sphaerochaeta coccoides DSM 17374 10495386 YP_004411673.1 CDS Spico_1070 NC_015436.1 1234273 1235157 R COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: cce:Ccel_1254 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503957376; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein complement(1234273..1235157) Sphaerochaeta coccoides DSM 17374 10495387 YP_004411674.1 CDS Spico_1071 NC_015436.1 1235170 1236123 R COGs: COG4209 ABC-type polysaccharide transport system permease component; InterPro IPR000515; KEGG: gym:GYMC10_4465 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503957377; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein complement(1235170..1236123) Sphaerochaeta coccoides DSM 17374 10495388 YP_004411675.1 CDS Spico_1072 NC_015436.1 1236222 1237820 R COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: cce:Ccel_1252 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein family 1; IMG reference gene:2503957378; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein complement(1236222..1237820) Sphaerochaeta coccoides DSM 17374 10495389 YP_004411676.1 CDS Spico_1073 NC_015436.1 1237948 1239192 R COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: ppp:PHYPADRAFT_103760 hypothetical protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Predicted protein; IMG reference gene:2503957379; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator complement(1237948..1239192) Sphaerochaeta coccoides DSM 17374 10495390 YP_004411677.1 CDS Spico_1074 NC_015436.1 1239490 1240554 D COGs: COG0216 Protein chain release factor A; HAMAP: Peptide chain release factor 1; InterPro IPR004373:IPR005139:IPR000352; KEGG: tde:TDE2489 peptide chain release factor 1; PFAM: Peptide chain release factor class I/class II; Peptide chain release factor; SMART: Peptide chain release factor; SPTR: Peptide chain release factor 1; TIGRFAM: Peptide chain release factor 1; IMG reference gene:2503957380; PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1; peptide chain release factor 1 1239490..1240554 Sphaerochaeta coccoides DSM 17374 10495391 YP_004411678.1 CDS Spico_1075 NC_015436.1 1240554 1241417 D COGs: COG2890 Methylase of polypeptide chain release factors; InterPro IPR007848:IPR004556:IPR019874; KEGG: dsy:DSY4933 hypothetical protein; PFAM: Methyltransferase small; PRIAM: Site-specific DNA-methyltransferase (adenine-specific); SPTR: Methylase of polypeptide chain release factors; TIGRFAM: Protein-(glutamine-N5) methyltransferase, release factor-specific; Modification methylase HemK; IMG reference gene:2503957381; PFAM: Methyltransferase small domain; TIGRFAM: HemK family methylases; protein-(glutamine-N5) methyltransferase, release factor-specific; protein-(glutamine-N5) methyltransferase 1240554..1241417 Sphaerochaeta coccoides DSM 17374 10495392 YP_004411679.1 CDS Spico_1076 NC_015436.1 1241402 1243456 D COGs: COG0317 Guanosine polyphosphate pyrophosphohydrolase/synthetase; InterProIPR006674:IPR007685:IPR004095:IPR004811:IPR 003607; KEGG: ssm:Spirs_3047 (p)ppGpp synthetase I, SpoT/RelA; PFAM: RelA/SpoT; Metal-dependent phosphohydrolase, HD subdomain; TGS; PRIAM: GTP diphosphokinase; SMART: RelA/SpoT; Metal-dependent phosphohydrolase, HD domain; SPTR: Probable GTP pyrophosphokinase; TIGRFAM: RelA/SpoT protein; IMG reference gene:2503957382; PFAM: HD domain; TGS domain; Region found in RelA / SpoT proteins; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family; (p)ppGpp synthetase I SpoT/RelA 1241402..1243456 Sphaerochaeta coccoides DSM 17374 10495393 YP_004411680.1 CDS Spico_1077 NC_015436.1 1243577 1244026 D COGs: COG0698 Ribose 5-phosphate isomerase RpiB; InterPro IPR003500; KEGG: ssm:Spirs_2662 sugar-phosphate isomerase, RpiB/LacA/LacB family; PFAM: Ribose/galactose isomerase; PRIAM: Ribose-5-phosphate isomerase; SPTR: Ribose 5-phosphate isomerase B; TIGRFAM: Ribose/galactose isomerase; IMG reference gene:2503957383; PFAM: Ribose/Galactose Isomerase; TIGRFAM: sugar-phosphate isomerases, RpiB/LacA/LacB family; ribose-5-phosphate isomerase 1243577..1244026 Sphaerochaeta coccoides DSM 17374 10495394 YP_004411681.1 CDS Spico_1078 NC_015436.1 1244053 1244688 R KEGG: asc:ASAC_1319 dehydrogenase; SPTR: Aquaporin Z; manually curated; IMG reference gene:2503957384; hypothetical protein complement(1244053..1244688) Sphaerochaeta coccoides DSM 17374 10495395 YP_004411682.1 CDS Spico_1079 NC_015436.1 1244685 1245227 R KEGG: ppp:PHYPADRAFT_84532 Rb -related protein; SPTR: Retinoblastoma-related protein; IMG reference gene:2503957385; hypothetical protein complement(1244685..1245227) Sphaerochaeta coccoides DSM 17374 10495396 YP_004411683.1 CDS Spico_1080 NC_015436.1 1245250 1246539 R COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; InterPro IPR001736; KEGG: dal:Dalk_3445 phospholipase D/transphosphatidylase; PFAM: Phospholipase D/Transphosphatidylase; SMART: Phospholipase D/Transphosphatidylase; SPTR: Cardiolipin synthetase; IMG reference gene:2503957386; PFAM: Phospholipase D Active site motif; phospholipase D/Transphosphatidylase complement(1245250..1246539) Sphaerochaeta coccoides DSM 17374 10495397 YP_004411684.1 CDS Spico_1081 NC_015436.1 1246539 1247714 R COGs: COG0295 Cytidine deaminase; InterPro IPR005834:IPR002125:IPR006402:IPR006262; KEGG: ssm:Spirs_2666 cytidine deaminase; PFAM: Haloacid dehalogenase-like hydrolase; CMP/dCMP deaminase, zinc-binding; SPTR: uncharacterized protein; TIGRFAM: Cytidine deaminase, homotetrameric; HAD-superfamily hydrolase, subfamily IA, variant 3; IMG reference gene:2503957387; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; cytidine deaminase, homotetrameric; cytidine deaminase complement(1246539..1247714) Sphaerochaeta coccoides DSM 17374 10495398 YP_004411685.1 CDS Spico_1082 NC_015436.1 1247807 1249333 R COGs: COG0112 Glycine/serine hydroxymethyltransferase; InterPro IPR001085; KEGG: ssm:Spirs_2146 glycine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase; PRIAM: Glycine hydroxymethyltransferase; SPTR: Serine hydroxymethyltransferase; IMG reference gene:2503957388; PFAM: Serine hydroxymethyltransferase; serine hydroxymethyltransferase complement(1247807..1249333) Sphaerochaeta coccoides DSM 17374 10495399 YP_004411686.1 CDS Spico_1083 NC_015436.1 1249557 1249796 D COGs: COG0361 Translation initiation factor 1 (IF-1); HAMAP: Translation initiation factor IF-1; InterPro IPR004368:IPR006196:IPR022967; KEGG: sta:STHERM_c16730 translation initiation factor IF-1 1; PFAM: RNA-binding domain, S1, IF1 type; SMART: RNA-binding domain, S1; SPTR: Translation initiation factor IF-1 1; TIGRFAM: Translation initiation factor IF-1; IMG reference gene:2503957389; PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1; translation initiation factor 1 (bIF-1) 1249557..1249796 Sphaerochaeta coccoides DSM 17374 10495400 YP_004411687.1 CDS Spico_1084 NC_015436.1 1249756 1250046 D KEGG: scm:SCHCODRAFT_61185 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957390; hypothetical protein 1249756..1250046 Sphaerochaeta coccoides DSM 17374 10495401 YP_004411688.1 CDS Spico_1085 NC_015436.1 1250144 1251166 R COGs: COG1893 Ketopantoate reductase; InterPro IPR013332:IPR013752:IPR003710; KEGG: pde:Pden_4530 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, C-terminal; Ketopantoate reductase ApbA/PanE, N-terminal; PRIAM: 2-dehydropantoate 2-reductase; SPTR: 2-dehydropantoate 2-reductase; TIGRFAM: Ketopantoate reductase ApbA/PanE; IMG reference gene:2503957391; PFAM: Ketopantoate reductase PanE/ApbA; Ketopantoate reductase PanE/ApbA C terminal; TIGRFAM: 2-dehydropantoate 2-reductase; 2-dehydropantoate 2-reductase complement(1250144..1251166) Sphaerochaeta coccoides DSM 17374 10495402 YP_004411689.1 CDS Spico_1086 NC_015436.1 1251274 1252116 R COGs: COG2840 conserved hypothetical protein; InterPro IPR002625; KEGG: tde:TDE1254 Smr domain-containing protein; PFAM: Smr protein/MutS2 C-terminal; SMART: Smr protein/MutS2 C-terminal; SPTR: Smr domain protein; IMG reference gene:2503957392; PFAM: Smr domain; Smr protein/MutS2 complement(1251274..1252116) Sphaerochaeta coccoides DSM 17374 10495403 YP_004411690.1 CDS Spico_1087 NC_015436.1 1252119 1252763 R COGs: COG3448 CBS-domain-containing membrane protein; InterPro IPR000644:IPR002912; KEGG: ssm:Spirs_0348 signal transduction protein with CBS domains; PFAM: Cystathionine beta-synthase, core; Amino acid-binding ACT; SMART: Cystathionine beta-synthase, core; SPTR: CBS domain containing protein; IMG reference gene:2503957393; PFAM: CBS domain; hypothetical protein complement(1252119..1252763) Sphaerochaeta coccoides DSM 17374 10495404 YP_004411691.1 CDS Spico_1088 NC_015436.1 1252838 1253581 R COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: ssm:Spirs_0347 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; IMG reference gene:2503957394; PFAM: ABC transporter; amino acid ABC transporter ATP-binding protein complement(1252838..1253581) Sphaerochaeta coccoides DSM 17374 10495405 YP_004411692.1 CDS Spico_1089 NC_015436.1 1253574 1254362 R COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: ddf:DEFDS_0657 branched-chain amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Branched-chain amino acid ABC transporter, ATP-binding protein; IMG reference gene:2503957395; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; amino acid ABC transporter ATP-binding protein complement(1253574..1254362) Sphaerochaeta coccoides DSM 17374 10495406 YP_004411693.1 CDS Spico_1090 NC_015436.1 1254359 1255327 R COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: dvl:Dvul_2395 inner-membrane translocator; PFAM: ABC transporter permease; SPTR: High-affinity branched-chain amino acid ABC transporter, permease; IMG reference gene:2503957396; PFAM: Branched-chain amino acid transport system / permease component; inner-membrane translocator complement(1254359..1255327) Sphaerochaeta coccoides DSM 17374 10495407 YP_004411694.1 CDS Spico_1091 NC_015436.1 1255327 1256247 R COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: smc:SmuNN2025_0449 branched chain amino acid ABC transporter permease; PFAM: ABC transporter permease; SPTR: branched chain amino acid ABC transporter, permease; IMG reference gene:2503957397; PFAM: Branched-chain amino acid transport system / permease component; amino acid ABC transporter permease complement(1255327..1256247) Sphaerochaeta coccoides DSM 17374 10495408 YP_004411695.1 CDS Spico_1092 NC_015436.1 1256560 1257738 R COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: dtu:Dtur_0932 extracellular ligand-binding receptor; PFAM: Extracellular ligand-binding receptor; SPTR: Extracellular ligand-binding receptor; IMG reference gene:2503957398; PFAM: Receptor family ligand binding region; ABC transporter substrate-binding protein complement(1256560..1257738) Sphaerochaeta coccoides DSM 17374 10495409 YP_004411696.1 CDS Spico_1093 NC_015436.1 1257969 1258781 R COGs: COG3541 nucleotidyltransferase; InterPro IPR018775; KEGG: lic:LIC12213 hypothetical protein; PFAM: Nucleotidyltransferase, predicted; SPTR: uncharacterized protein; IMG reference gene:2503957399; PFAM: Predicted nucleotidyltransferase; nucleotidyltransferase complement(1257969..1258781) Sphaerochaeta coccoides DSM 17374 10495410 YP_004411697.1 CDS Spico_1094 NC_015436.1 1259057 1259779 D COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: spv:SPH_1818 nitroreductase; PFAM: Nitroreductase-like; SPTR: Nitroreductase; IMG reference gene:2503957401; PFAM: Nitroreductase; nitroreductase 1259057..1259779 Sphaerochaeta coccoides DSM 17374 10495412 YP_004411698.1 CDS Spico_1095 NC_015436.1 1259909 1261138 R KEGG: rno:361605 PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae); SPTR: uncharacterized protein; IMG reference gene:2503957402; hypothetical protein complement(1259909..1261138) Sphaerochaeta coccoides DSM 17374 10495413 YP_004411699.1 CDS Spico_1096 NC_015436.1 1261327 1263918 R COGs: COG0550 Topoisomerase IA; InterProIPR006171:IPR013497:IPR005733:IPR003601:IPR 003602; KEGG: ssm:Spirs_0893 DNA topoisomerase I; PFAM: DNA topoisomerase, type IA, central; Toprim domain; PRIAM: DNA topoisomerase; SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain; SPTR: DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial-type; IMG reference gene:2503957403; PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial; DNA topoisomerase I complement(1261327..1263918) Sphaerochaeta coccoides DSM 17374 10495414 YP_004411700.1 CDS Spico_1097 NC_015436.1 1264185 1264910 D KEGG: ssm:Spirs_3916 hypothetical protein; SPTR: Extracellular solute-binding protein family 5; IMG reference gene:2503957404; hypothetical protein 1264185..1264910 Sphaerochaeta coccoides DSM 17374 10495415 YP_004411701.1 CDS Spico_1098 NC_015436.1 1264957 1266051 R COGs: COG0012 GTPase probable translation factor; InterPro IPR002917:IPR013029:IPR004396; KEGG: ssm:Spirs_3050 GTP-binding protein YchF; PFAM: Domain of unknown function DUF933; GTP-binding protein, HSR1-related; SPTR: GTP-binding protein YchF; TIGRFAM: Conserved hypothetical protein CHP00092; IMG reference gene:2503957405; PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF; GTP-binding protein YchF complement(1264957..1266051) Sphaerochaeta coccoides DSM 17374 10495416 YP_004411702.1 CDS Spico_1099 NC_015436.1 1266082 1267506 D COGs: COG2262 GTPase; InterPro IPR002917:IPR016496; KEGG: ssm:Spirs_3087 GTP-binding protein HflX; PFAM: GTP-binding protein, HSR1-related; SPTR: GTPase; TIGRFAM: GTP-binding protein, HflX; IMG reference gene:2503957406; PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX; GTP-binding protein HflX 1266082..1267506 Sphaerochaeta coccoides DSM 17374 10495417 YP_004411703.1 CDS Spico_1100 NC_015436.1 1267735 1268193 R KEGG: pmo:Pmob_1807 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957407; hypothetical protein complement(1267735..1268193) Sphaerochaeta coccoides DSM 17374 10495418 YP_004411704.1 CDS Spico_1101 NC_015436.1 1268410 1270017 D COGs: COG1297 membrane protein; InterPro IPR004813; KEGG: cce:Ccel_0706 oligopeptide transporters, OPT superfamily; PFAM: Oligopeptide transporter OPT superfamily; SPTR: Oligopeptide transporter, OPT superfamily; IMG reference gene:2503957408; PFAM: OPT oligopeptide transporter protein; TIGRFAM: oligopeptide transporter, OPT family; oligopeptide transporter OPT superfamily protein 1268410..1270017 Sphaerochaeta coccoides DSM 17374 10495419 YP_004411705.1 CDS Spico_1102 NC_015436.1 1270038 1271117 D COGs: COG0820 Fe-S-cluster redox enzyme; InterPro IPR007197:IPR004383; KEGG: ssm:Spirs_3145 radical SAM enzyme, Cfr family; PFAM: Radical SAM; SPTR: Ribosomal RNA large subunit methyltransferase N; TIGRFAM: Ribosomal RNA large subunit methyltransferase RlmN; IMG reference gene:2503957409; PFAM: Radical SAM superfamily; TIGRFAM: 23S rRNA m2A2503 methyltransferase; radical SAM enzyme, Cfr family 1270038..1271117 Sphaerochaeta coccoides DSM 17374 10495420 YP_004411706.1 CDS Spico_1103 NC_015436.1 1271149 1272945 R COGs: COG0013 Alanyl-tRNA synthetase; InterPro IPR018164:IPR012947:IPR002318; KEGG: ssm:Spirs_3146 alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc, N-terminal; Threonyl/alanyl tRNA synthetase, SAD; SMART: Threonyl/alanyl tRNA synthetase, SAD; SPTR: Alanyl-tRNA synthetase; TIGRFAM: Alanyl-tRNA synthetase, class IIc; IMG reference gene:2503957410; PFAM: Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase; alanyl-tRNA synthetase complement(1271149..1272945) Sphaerochaeta coccoides DSM 17374 10495421 YP_004411707.1 CDS Spico_1104 NC_015436.1 1273039 1273974 R COGs: COG0758 Rossmann fold nucleotide-binding protein involved in DNA uptake; InterPro IPR003488; KEGG: kko:Kkor_2616 DNA protecting protein DprA; PFAM: DNA recombination-mediator protein A; SPTR: uncharacterized protein; IMG reference gene:2503957411; PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA; SMF family protein complement(1273039..1273974) Sphaerochaeta coccoides DSM 17374 10495422 YP_004411708.1 CDS Spico_1105 NC_015436.1 1274338 1274865 R COGs: COG1335 Amidase related to nicotinamidase; KEGG: ele:Elen_0388 conserved hypothetical protein, amidase; SPTR: uncharacterized protein; IMG reference gene:2503957413; PFAM: Isochorismatase; amidase complement(1274338..1274865) Sphaerochaeta coccoides DSM 17374 10495424 YP_004411709.1 CDS Spico_1106 NC_015436.1 1274900 1275931 D COGs: COG1957 Inosine-uridine nucleoside N-ribohydrolase; InterPro IPR001910; KEGG: str:Sterm_3734 ribosylpyrimidine nucleosidase; PFAM: Inosine/uridine-preferring nucleoside hydrolase domain; PRIAM: Ribosylpyrimidine nucleosidase; SPTR: Ribosylpyrimidine nucleosidase; IMG reference gene:2503957414; PFAM: Inosine-uridine preferring nucleoside hydrolase; ribosylpyrimidine nucleosidase 1274900..1275931 Sphaerochaeta coccoides DSM 17374 10495425 YP_004411710.1 CDS Spico_1107 NC_015436.1 1275983 1276606 R COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: sdl:Sdel_1154 nitroreductase; PFAM: Nitroreductase-like; SPTR: Nitroreductase; IMG reference gene:2503957415; PFAM: Nitroreductase; nitroreductase complement(1275983..1276606) Sphaerochaeta coccoides DSM 17374 10495426 YP_004411711.1 CDS Spico_1108 NC_015436.1 1276666 1277403 R COGs: COG0813 Purine-nucleoside phosphorylase; InterPro IPR000845; KEGG: csh:Closa_1682 purine nucleoside phosphorylase; PFAM: Nucleoside phosphorylase domain; PRIAM: Purine-nucleoside phosphorylase; SPTR: Purine nucleoside phosphorylase deoD-type; IMG reference gene:2503957416; PFAM: Phosphorylase superfamily; TIGRFAM: purine-nucleoside phosphorylase, family 1 (deoD); purine-nucleoside phosphorylase complement(1276666..1277403) Sphaerochaeta coccoides DSM 17374 10495427 YP_004411712.1 CDS Spico_1109 NC_015436.1 1277403 1278311 R COGs: COG1079 ABC-type transport system permease component; InterPro IPR001851; KEGG: amt:Amet_3583 inner-membrane translocator; PFAM: ABC transporter permease; SPTR: uncharacterized protein; IMG reference gene:2503957417; PFAM: Branched-chain amino acid transport system / permease component; nucleoside ABC transporter membrane protein complement(1277403..1278311) Sphaerochaeta coccoides DSM 17374 10495428 YP_004411713.1 CDS Spico_1110 NC_015436.1 1278308 1279432 R COGs: COG4603 ABC-type uncharacterized transport system permease component; InterPro IPR001851; KEGG: sta:STHERM_c17730 permease; PFAM: ABC transporter permease; SPTR: Carbohydrate uptake 2 (CUT2) family, permease; IMG reference gene:2503957418; PFAM: Branched-chain amino acid transport system / permease component; inner-membrane translocator complement(1278308..1279432) Sphaerochaeta coccoides DSM 17374 10495429 YP_004411714.1 CDS Spico_1111 NC_015436.1 1279429 1280970 R COGs: COG3845 ABC-type uncharacterized transport systems ATPase components; InterPro IPR003439:IPR003593; KEGG: aoe:Clos_0964 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; IMG reference gene:2503957419; PFAM: ABC transporter; nucleoside ABC transporter ATP-binding protein complement(1279429..1280970) Sphaerochaeta coccoides DSM 17374 10495430 YP_004411715.1 CDS Spico_1112 NC_015436.1 1281134 1282237 R COGs: COG1744 Uncharacterized ABC-type transport system periplasmic component/surface lipoprotein; InterPro IPR003760; KEGG: sta:STHERM_c17750 membrane lipoprotein TmpC precursor; PFAM: Basic membrane lipoprotein; SPTR: uncharacterized protein; IMG reference gene:2503957420; PFAM: Basic membrane protein; basic membrane lipoprotein complement(1281134..1282237) Sphaerochaeta coccoides DSM 17374 10495431 YP_004411716.1 CDS Spico_1113 NC_015436.1 1282452 1283216 D COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: sfu:Sfum_1750 cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter-like; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Cobalt ABC transporter, ATPase subunit; IMG reference gene:2503957421; PFAM: ABC transporter; Fe(3+)-transporting ATPase 1282452..1283216 Sphaerochaeta coccoides DSM 17374 10495432 YP_004411717.1 CDS Spico_1114 NC_015436.1 1283201 1283929 D COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339; KEGG: dal:Dalk_0379 cobalt transport protein; PFAM: Cobalt transport protein; SPTR: Cobalt transport protein; IMG reference gene:2503957422; PFAM: Cobalt transport protein; cobalt transport protein 1283201..1283929 Sphaerochaeta coccoides DSM 17374 10495433 YP_004411718.1 CDS Spico_1115 NC_015436.1 1283977 1284603 D COGs: COG0212 5-formyltetrahydrofolate cyclo-ligase; InterPro IPR002698; KEGG: bha:BH1417 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; SPTR: 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; IMG reference gene:2503957423; PFAM: 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase; 5-formyltetrahydrofolate cyclo-ligase 1283977..1284603 Sphaerochaeta coccoides DSM 17374 10495434 YP_004411719.1 CDS Spico_1116 NC_015436.1 1284557 1285111 R COGs: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); KEGG: ssm:Spirs_1642 PTS IIA-like nitrogen-regulatory protein PtsN; SPTR: uncharacterized protein; IMG reference gene:2503957424; PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN complement(1284557..1285111) Sphaerochaeta coccoides DSM 17374 10495435 YP_004411720.1 CDS Spico_1117 NC_015436.1 1285162 1286649 R COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR013027:IPR006004; KEGG: dap:Dacet_0223 glutamate synthase (NADPH), homotetrameric; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: Glutamate synthase (NADPH); SPTR: Glutamate synthase (NADPH), homotetrameric; TIGRFAM: Glutamate synthase (NADPH), homotetrameric; IMG reference gene:2503957425; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthase (NADPH), homotetrameric; sulfide dehydrogenase (flavoprotein) subunit SudA complement(1285162..1286649) Sphaerochaeta coccoides DSM 17374 10495436 YP_004411721.1 CDS Spico_1118 NC_015436.1 1286671 1287504 R COGs: COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase; InterPro IPR001433:IPR019480; KEGG: ssm:Spirs_1640 oxidoreductase FAD/NAD(P)-binding domain protein; PFAM: Oxidoreductase FAD/NAD(P)-binding; Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; SPTR: Ferredoxin--NADP; IMG reference gene:2503957426; PFAM: Oxidoreductase FAD-binding domain; Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain; sulfide dehydrogenase (flavoprotein) subunit SudB complement(1286671..1287504) Sphaerochaeta coccoides DSM 17374 10495437 YP_004411722.1 CDS Spico_1119 NC_015436.1 1287873 1288319 R COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: rfe:RF_1004 small heat shock protein; PFAM: Heat shock protein Hsp20; SPTR: Small heat shock protein C2; IMG reference gene:2503957427; PFAM: Hsp20/alpha crystallin family; heat shock protein Hsp20 complement(1287873..1288319) Sphaerochaeta coccoides DSM 17374 10495438 YP_004411723.1 CDS Spico_1120 NC_015436.1 1288647 1289450 R COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: csh:Closa_2870 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator, AraC family; IMG reference gene:2503957428; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator complement(1288647..1289450) Sphaerochaeta coccoides DSM 17374 10495439 YP_004411724.1 CDS Spico_1121 NC_015436.1 1289655 1290623 D COGs: COG4606 ABC-type enterochelin transport system permease component; InterPro IPR000522; KEGG: csh:Closa_2869 transport system permease; PFAM: ABC transporter permease; SPTR: Transport system permease; IMG reference gene:2503957429; PFAM: FecCD transport family; transport system permease 1289655..1290623 Sphaerochaeta coccoides DSM 17374 10495440 YP_004411725.1 CDS Spico_1122 NC_015436.1 1290610 1291572 D COGs: COG4605 ABC-type enterochelin transport system permease component; InterPro IPR000522; KEGG: csh:Closa_2868 transport system permease; PFAM: ABC transporter permease; SPTR: Transport system permease; IMG reference gene:2503957430; PFAM: FecCD transport family; transport system permease 1290610..1291572 Sphaerochaeta coccoides DSM 17374 10495441 YP_004411726.1 CDS Spico_1123 NC_015436.1 1291569 1292327 D COGs: COG4604 ABC-type enterochelin transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: bcy:Bcer98_0361 ABC transporter-related protein; PFAM: ABC transporter-like; PRIAM: Iron-chelate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter-related protein; IMG reference gene:2503957431; PFAM: ABC transporter; iron-chelate-transporting ATPase 1291569..1292327 Sphaerochaeta coccoides DSM 17374 10495442 YP_004411727.1 CDS Spico_1124 NC_015436.1 1292377 1293339 D COGs: COG4607 ABC-type enterochelin transport system periplasmic component; InterPro IPR002491; KEGG: csh:Closa_2866 periplasmic binding protein; PFAM: Periplasmic binding protein; SPTR: Periplasmic binding protein; IMG reference gene:2503957432; PFAM: Periplasmic binding protein; periplasmic binding protein 1292377..1293339 Sphaerochaeta coccoides DSM 17374 10495443 YP_004411728.1 CDS Spico_1125 NC_015436.1 1293817 1296435 D COGs: COG1203 helicase; InterPro IPR001650:IPR006483:IPR006474:IPR014001; KEGG: paa:Paes_1419 CRISPR-associated helicase Cas3; PFAM: Helicase, C-terminal; SMART: Helicase, C-terminal; DEAD-like helicase, N-terminal; SPTR: CRISPR-associated helicase Cas3; TIGRFAM: Helicase Cas3, CRISPR-associated, core; CRISPR-associated HD domain; IMG reference gene:2503957433; PFAM: DEAD/DEAH box helicase; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated endonuclease Cas3-HD; CRISPR-associated helicase Cas3 1293817..1296435 Sphaerochaeta coccoides DSM 17374 10495444 YP_004411729.1 CDS Spico_1126 NC_015436.1 1296429 1297937 D InterPro IPR013381; KEGG: paa:Paes_1418 CRISPR-associated protein, CSE1 family; PFAM: CRISPR-associated protein Cse1; SPTR: CRISPR-associated protein, Cse1 family; TIGRFAM: CRISPR-associated protein Cse1; IMG reference gene:2503957434; PFAM: CRISPR-associated protein Cse1 (CRISPR_cse1); TIGRFAM: CRISPR type I-E/ECOLI-associated protein CasA/Cse1; Cse1 family CRISPR-associated protein 1296429..1297937 Sphaerochaeta coccoides DSM 17374 10495445 YP_004411730.1 CDS Spico_1127 NC_015436.1 1297927 1298454 D InterPro IPR013382; KEGG: dze:Dd1591_0910 CRISPR-associated protein, CSE2 family; PFAM: CRISPR-associated protein Cse2; SPTR: CRISPR-associated protein, Cse2 family; TIGRFAM: CRISPR-associated protein Cse2; IMG reference gene:2503957435; PFAM: CRISPR-associated protein Cse2 (CRISPR_cse2); TIGRFAM: CRISPR type I-E/ECOLI-associated protein CasB/Cse2; Cse2 family CRISPR-associated protein 1297927..1298454 Sphaerochaeta coccoides DSM 17374 10495446 YP_004411731.1 CDS Spico_1128 NC_015436.1 1298451 1299047 D InterPro IPR010179; KEGG: dal:Dalk_4936 CRISPR-associated protein, CSE3 family; PFAM: CRISPR-associated protein, CT1974; SPTR: CRISPR-associated protein, Cse3 family; TIGRFAM: CRISPR-associated protein, CT1974; IMG reference gene:2503957436; PFAM: CRISPR associated protein; TIGRFAM: CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI; CRISPR-associated protein, Cse3 family 1298451..1299047 Sphaerochaeta coccoides DSM 17374 10495447 YP_004411732.1 CDS Spico_1129 NC_015436.1 1299044 1300117 D InterPro IPR010148; KEGG: dze:Dd1591_0908 CRISPR-associated protein, CSE4 family; PFAM: CRISPR-associated protein, CT1975; SPTR: CRISPR-associated protein, Cse4 family; TIGRFAM: CRISPR-associated protein, CT1975; IMG reference gene:2503957437; PFAM: CT1975-like protein; TIGRFAM: CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI; CRISPR-associated protein, Cse4 family 1299044..1300117 Sphaerochaeta coccoides DSM 17374 10495448 YP_004411733.1 CDS Spico_1130 NC_015436.1 1300128 1300826 D InterPro IPR010147:IPR013422; KEGG: cpb:Cphamn1_2163 CRISPR-associated protein Cas5 family; SPTR: CRISPR-associated protein Cas5 family; TIGRFAM: CRISPR-associated protein, Cas5e-type; CRISPR-associated protein Cas5, N-terminal domain; IMG reference gene:2503957438; PFAM: CRISPR-associated protein (Cas_Cas5); TIGRFAM: CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI; CRISPR-associated protein Cas5, N-terminal domain; CRISPR-associated protein Cas5 family 1300128..1300826 Sphaerochaeta coccoides DSM 17374 10495449 YP_004411734.1 CDS Spico_1131 NC_015436.1 1300826 1301671 D COGs: COG1518 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR002729:IPR019851; KEGG: dal:Dalk_4939 CRISPR-associated protein Cas1; PFAM: CRISPR-associated protein Cas1; SPTR: CRISPR-associated protein Cas1; TIGRFAM: CRISPR-associated protein Cas1, ECOLI subtype; CRISPR-associated protein Cas1; IMG reference gene:2503957439; PFAM: CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated endonuclease Cas1; CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI; CRISPR-associated protein, Cas1 family 1300826..1301671 Sphaerochaeta coccoides DSM 17374 10495450 YP_004411735.1 CDS Spico_1132 NC_015436.1 1301674 1301952 D InterPro IPR010152; KEGG: dal:Dalk_4940 CRISPR-associated protein Cas2; PFAM: CRISPR-associated protein Cas2 subtype; SPTR: CRISPR-associated protein, Cas2; TIGRFAM: CRISPR-associated protein Cas2 subtype; IMG reference gene:2503957440; PFAM: CRISPR-associated protein (Cas_Cas2CT1978); TIGRFAM: CRISPR-associated endoribonuclease Cas2, subtype I-E/ECOLI; CRISPR-associated protein, Cas2 family 1301674..1301952 Sphaerochaeta coccoides DSM 17374 10495451 YP_004411736.1 CDS Spico_1134 NC_015436.1 1306971 1307561 D KEGG: yps:YPTB1831 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957442; hypothetical protein 1306971..1307561 Sphaerochaeta coccoides DSM 17374 10495453 YP_004411737.1 CDS Spico_1136 NC_015436.1 1308055 1308450 D KEGG: ton:TON_0298 ABC-type iron(III)-siderophore transport system, ATPase component; SPTR: ABC-type iron(III)-siderophore transport system, ATPase component; IMG reference gene:2503957444; hypothetical protein 1308055..1308450 Sphaerochaeta coccoides DSM 17374 10495455 YP_004411738.1 CDS Spico_1137 NC_015436.1 1308619 1309524 R KEGG: sgl:SG1747 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957445; PFAM: Domain of unknown function (DUF3427); hypothetical protein complement(1308619..1309524) Sphaerochaeta coccoides DSM 17374 10495456 YP_004411739.1 CDS Spico_1139 NC_015436.1 1310625 1311086 D KEGG: brm:Bmur_2766 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957447; hypothetical protein 1310625..1311086 Sphaerochaeta coccoides DSM 17374 10495458 YP_004411740.1 CDS Spico_1140 NC_015436.1 1311041 1311247 D KEGG: aau:AAur_3200 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957448; PFAM: Host cell surface-exposed lipoprotein; hypothetical protein 1311041..1311247 Sphaerochaeta coccoides DSM 17374 10495459 YP_004411741.1 CDS Spico_1142 NC_015436.1 1314184 1315683 R COGs: COG2865 transcriptional regulator protein; InterPro IPR007421; KEGG: gka:GK0575 hypothetical protein; PFAM: ATPase, AAA-4; SPTR: uncharacterized protein; IMG reference gene:2503957450; PFAM: Divergent AAA domain; transcriptional regulator complement(1314184..1315683) Sphaerochaeta coccoides DSM 17374 10495461 YP_004411742.1 CDS Spico_1143 NC_015436.1 1316190 1316351 R SPTR: uncharacterized protein; IMG reference gene:2503957451; hypothetical protein complement(1316190..1316351) Sphaerochaeta coccoides DSM 17374 10495462 YP_004411743.1 CDS Spico_1144 NC_015436.1 1316355 1316966 R KEGG: pru:PRU_1109 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957452; hypothetical protein complement(1316355..1316966) Sphaerochaeta coccoides DSM 17374 10495463 YP_004411744.1 CDS Spico_1145 NC_015436.1 1317114 1317875 R KEGG: vex:VEA_002903 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957453; hypothetical protein complement(1317114..1317875) Sphaerochaeta coccoides DSM 17374 10495464 YP_004411745.1 CDS Spico_1147 NC_015436.1 1318115 1318636 D KEGG: hwa:HQ2045A phosphoesterase; SPTR: uncharacterized protein; IMG reference gene:2503957455; hypothetical protein 1318115..1318636 Sphaerochaeta coccoides DSM 17374 10495466 YP_004411746.1 CDS Spico_1148 NC_015436.1 1318713 1318862 R KEGG: cce:Ccel_2675 transposase mutator type; SPTR: Transposase; IMG reference gene:2503957456; transposase mutator type complement(1318713..1318862) Sphaerochaeta coccoides DSM 17374 10495467 YP_004411747.1 CDS Spico_1149 NC_015436.1 1319131 1319457 R KEGG: csa:Csal_0698 cell division protein ZipA; SPTR: Cell division protein zipA; IMG reference gene:2503957457; hypothetical protein complement(1319131..1319457) Sphaerochaeta coccoides DSM 17374 10495468 YP_004411748.1 CDS Spico_1150 NC_015436.1 1322087 1322668 R InterPro IPR013396; KEGG: mct:MCR_0030 CRISPR-associated Csy4 family protein; PFAM: CRISPR-associated protein Csy4; SPTR: uncharacterized protein; TIGRFAM: CRISPR-associated protein Csy4; IMG reference gene:2503957458; PFAM: CRISPR-associated protein (Cas_Csy4); TIGRFAM: CRISPR-associated protein Cas6/Csy4, subtype I-F/YPEST; CRISPR-associated protein, Csy4 family complement(1322087..1322668) Sphaerochaeta coccoides DSM 17374 10495469 YP_004411749.1 CDS Spico_1151 NC_015436.1 1322678 1323712 R InterPro IPR013399; KEGG: abb:ABBFA_000985 CRISPR-associated protein (Cas_Csy3) family protein; PFAM: CRISPR-associated protein Csy3; SPTR: CRISPR-associated protein, Csy3 family protein; TIGRFAM: CRISPR-associated protein Csy3; IMG reference gene:2503957459; PFAM: CRISPR-associated protein (Cas_Csy3); TIGRFAM: CRISPR type I-F/YPEST-associated protein Csy3; CRISPR-associated protein, Csy3 family complement(1322678..1323712) Sphaerochaeta coccoides DSM 17374 10495470 YP_004411750.1 CDS Spico_1152 NC_015436.1 1323714 1324607 R InterPro IPR013398; KEGG: abb:ABBFA_000984 CRISPR-associated protein (Cas_Csy2) family protein; PFAM: CRISPR-associated protein Csy2; SPTR: uncharacterized protein; TIGRFAM: CRISPR-associated protein Csy2; IMG reference gene:2503957460; PFAM: CRISPR-associated protein (Cas_Csy2); TIGRFAM: CRISPR type I-F/YPEST-associated protein Csy2; CRISPR-associated protein, Csy2 family complement(1323714..1324607) Sphaerochaeta coccoides DSM 17374 10495471 YP_004411751.1 CDS Spico_1153 NC_015436.1 1324604 1325806 R InterPro IPR013397; KEGG: abb:ABBFA_000983 hypothetical protein; PFAM: CRISPR-associated protein Csy1; SPTR: Crispr-associated protein, Csy1 family; TIGRFAM: CRISPR-associated protein Csy1; IMG reference gene:2503957461; PFAM: CRISPR-associated protein (Cas_Csy1); TIGRFAM: CRISPR type I-F/YPEST-associated protein Csy1; CRISPR-associated protein, Csy1 family complement(1324604..1325806) Sphaerochaeta coccoides DSM 17374 10495472 YP_004411752.1 CDS Spico_1154 NC_015436.1 1325827 1329120 R COGs: COG1203 helicase; InterPro IPR013395; KEGG: shw:Sputw3181_2190 CRISPR-associated helicase Cas3 family protein; SPTR: uncharacterized protein; TIGRFAM: Helicase Cas3, CRISPR-associated, Yersinia-type; IMG reference gene:2503957462; TIGRFAM: CRISPR-associated helicase Cas3, subtype I-F/YPEST; CRISPR-associated helicase Cas3 family complement(1325827..1329120) Sphaerochaeta coccoides DSM 17374 10495473 YP_004411753.1 CDS Spico_1155 NC_015436.1 1329117 1330094 R COGs: COG1518 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR002729:IPR019857; KEGG: abb:ABBFA_000981 CRISPR-associated protein Cas1; PFAM: CRISPR-associated protein Cas1; SPTR: uncharacterized protein; TIGRFAM: CRISPR-associated protein Cas1, YPEST subtype; CRISPR-associated protein Cas1; IMG reference gene:2503957463; PFAM: CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated endonuclease Cas1, subtype I-F/YPEST; CRISPR-associated endonuclease Cas1; CRISPR-associated protein, Cas1 family complement(1329117..1330094) Sphaerochaeta coccoides DSM 17374 10495474 YP_004411754.1 CDS Spico_1156 NC_015436.1 1330282 1330578 D KEGG: fjo:Fjoh_2814 proline dehydrogenase; SPTR: uncharacterized protein; IMG reference gene:2503957464; hypothetical protein 1330282..1330578 Sphaerochaeta coccoides DSM 17374 10495475 YP_004411755.1 CDS Spico_1157 NC_015436.1 1330679 1330807 R KEGG: cce:Ccel_2675 transposase mutator type; SPTR: Transposase; IMG reference gene:2503957465; transposase mutator type complement(1330679..1330807) Sphaerochaeta coccoides DSM 17374 10495476 YP_004411756.1 CDS Spico_1158 NC_015436.1 1330935 1332119 R InterPro IPR011701; KEGG: cbt:CLH_1564 transport protein; PFAM: Major facilitator superfamily MFS-1; SPTR: Transport protein; IMG reference gene:2503957466; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein complement(1330935..1332119) Sphaerochaeta coccoides DSM 17374 10495477 YP_004411757.1 CDS Spico_1159 NC_015436.1 1332124 1332948 R COGs: COG1533 DNA repair photolyase; InterPro IPR007197; KEGG: scb:SCAB_43781 hypothetical protein; PFAM: Radical SAM; SPTR: Radical SAM domain protein; IMG reference gene:2503957467; PFAM: Radical SAM superfamily; radical SAM protein complement(1332124..1332948) Sphaerochaeta coccoides DSM 17374 10495478 YP_004411758.1 CDS Spico_1160 NC_015436.1 1332923 1333120 R KEGG: clj:CLJU_c32650 prevent-host-death protein; SPTR: prevent-host-death protein; IMG reference gene:2503957468; hypothetical protein complement(1332923..1333120) Sphaerochaeta coccoides DSM 17374 10495479 YP_004411759.1 CDS Spico_1161 NC_015436.1 1333234 1334670 R COGs: COG2865 transcriptional regulator protein; InterPro IPR007421; KEGG: pgi:PG1526 hypothetical protein; PFAM: ATPase, AAA-4; SPTR: Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen; IMG reference gene:2503957469; PFAM: Divergent AAA domain; transcriptional regulator complement(1333234..1334670) Sphaerochaeta coccoides DSM 17374 10495480 YP_004411760.1 CDS Spico_1163 NC_015436.1 1335054 1336223 R InterPro IPR018891; KEGG: bai:BAA_3824 hypothetical protein; PFAM: Abortive phage infection; SPTR: uncharacterized protein; IMG reference gene:2503957471; PFAM: AIPR protein; Abortive phage infection protein complement(1335054..1336223) Sphaerochaeta coccoides DSM 17374 10495482 YP_004411761.1 CDS Spico_1165 NC_015436.1 1336589 1337812 R KEGG: cac:CA_C0063 hypothetical protein; SPTR: tail fiber; IMG reference gene:2503957473; hypothetical protein complement(1336589..1337812) Sphaerochaeta coccoides DSM 17374 10495484 YP_004411762.1 CDS Spico_1166 NC_015436.1 1337809 1345668 R KEGG: ssm:Spirs_2813 hypothetical protein; SPTR: Phage minor structural protein, ; IMG reference gene:2503957474; hypothetical protein complement(1337809..1345668) Sphaerochaeta coccoides DSM 17374 10495485 YP_004411763.1 CDS Spico_1167 NC_015436.1 1345668 1348451 R KEGG: ppg:PputGB1_1758 hypothetical protein; SPTR: LigA; IMG reference gene:2503957475; hypothetical protein complement(1345668..1348451) Sphaerochaeta coccoides DSM 17374 10495486 YP_004411764.1 CDS Spico_1168 NC_015436.1 1348455 1349240 R KEGG: dre:497403 im:7140452; SPTR: Tail tape meausure protein; IMG reference gene:2503957476; hypothetical protein complement(1348455..1349240) Sphaerochaeta coccoides DSM 17374 10495487 YP_004411765.1 CDS Spico_1169 NC_015436.1 1349237 1357840 R KEGG: ssm:Spirs_2813 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957477; hypothetical protein complement(1349237..1357840) Sphaerochaeta coccoides DSM 17374 10495488 YP_004411766.1 CDS Spico_1170 NC_015436.1 1357837 1360422 R KEGG: sha:SH1165 hypothetical protein; SPTR: Similar to FmtB/extracellular matrix binding protein; IMG reference gene:2503957478; hypothetical protein complement(1357837..1360422) Sphaerochaeta coccoides DSM 17374 10495489 YP_004411767.1 CDS Spico_1172 NC_015436.1 1361022 1361192 D IMG reference gene:2503957480; PFAM: Oxaloacetate decarboxylase, gamma chain; hypothetical protein 1361022..1361192 Sphaerochaeta coccoides DSM 17374 10495491 YP_004411768.1 CDS Spico_1173 NC_015436.1 1361182 1362318 D COGs: COG1883 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit; InterPro IPR005661; KEGG: csc:Csac_2482 sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; PRIAM: Glutaconyl-CoA decarboxylase; SPTR: Glutaconyl-CoA decarboxylase beta subunit; TIGRFAM: Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; IMG reference gene:2503957481; PFAM: subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; glutaconate CoA transferase subunit B 1361182..1362318 Sphaerochaeta coccoides DSM 17374 10495492 YP_004411769.1 CDS Spico_1174 NC_015436.1 1362403 1363080 R COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR003148:IPR006037; KEGG: cpy:Cphy_1928 TrkA domain-containing protein; PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; SPTR: Potassium uptake protein; IMG reference gene:2503957482; PFAM: TrkA-N domain; TrkA-C domain; TrkA-N domain-containing protein complement(1362403..1363080) Sphaerochaeta coccoides DSM 17374 10495493 YP_004411770.1 CDS Spico_1175 NC_015436.1 1363097 1364389 R COGs: COG0168 Trk-type K+ transport systems membrane components; InterPro IPR003445; KEGG: cpy:Cphy_1927 H(+)-transporting two-sector ATPase; PFAM: Cation transporter; PRIAM: H(+)-transporting two-sector ATPase; SPTR: H(+)-transporting two-sector ATPase; IMG reference gene:2503957483; PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family; H(+)-transporting two-sector ATPase complement(1363097..1364389) Sphaerochaeta coccoides DSM 17374 10495494 YP_004411771.1 CDS Spico_1176 NC_015436.1 1365108 1366457 D COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR003148:IPR006037; KEGG: dap:Dacet_2986 TrkA-N domain protein; PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; SPTR: TrkA-N domain protein; IMG reference gene:2503957485; PFAM: TrkA-N domain; TrkA-C domain; TrkA-N domain-containing protein 1365108..1366457 Sphaerochaeta coccoides DSM 17374 10495496 YP_004411772.1 CDS Spico_1177 NC_015436.1 1366468 1367922 D COGs: COG0168 Trk-type K+ transport systems membrane components; InterPro IPR003445; KEGG: ddf:DEFDS_1538 K+ transport (Trk) system membrane component; PFAM: Cation transporter; SPTR: K+ transport (Trk) system, membrane component; IMG reference gene:2503957486; PFAM: Cation transport protein; cation transporter 1366468..1367922 Sphaerochaeta coccoides DSM 17374 10495497 YP_004411773.1 CDS Spico_1178 NC_015436.1 1367931 1368659 D KEGG: clj:CLJU_c17880 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957487; PFAM: DNA alkylation repair enzyme; hypothetical protein 1367931..1368659 Sphaerochaeta coccoides DSM 17374 10495498 YP_004411774.1 CDS Spico_1179 NC_015436.1 1368705 1369700 R COGs: COG2355 Zn-dependent dipeptidase microsomal dipeptidase homolog; InterPro IPR008257; KEGG: ctc:CTC00571 membrane dipeptidase; PFAM: Peptidase M19, renal dipeptidase; SPTR: Membrane dipeptidase; IMG reference gene:2503957488; PFAM: Membrane dipeptidase (Peptidase M19); peptidase M19 complement(1368705..1369700) Sphaerochaeta coccoides DSM 17374 10495499 YP_004411775.1 CDS Spico_1180 NC_015436.1 1369993 1370307 D COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR013766:IPR005746; KEGG: ddf:DEFDS_1167 thioredoxin; PFAM: Thioredoxin domain; SPTR: Thioredoxin; TIGRFAM: Thioredoxin; IMG reference gene:2503957489; PFAM: Thioredoxin; TIGRFAM: thioredoxin; thioredoxin 1369993..1370307 Sphaerochaeta coccoides DSM 17374 10495500 YP_004411776.1 CDS Spico_1181 NC_015436.1 1370437 1370946 R COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: har:HEAR2542 oxidoreductase; PFAM: Nitroreductase-like; SPTR: Nitroreductase; IMG reference gene:2503957490; PFAM: Nitroreductase; nitroreductase complement(1370437..1370946) Sphaerochaeta coccoides DSM 17374 10495501 YP_004411777.1 CDS Spico_1182 NC_015436.1 1370922 1371857 R COGs: COG1284 conserved hypothetical protein; InterPro IPR003740:IPR019264; KEGG: mta:Moth_0235 hypothetical protein; PFAM: Protein of unknown function DUF161; Domain of unknown function DUF2179; SPTR: uncharacterized protein; IMG reference gene:2503957491; PFAM: Uncharacterized BCR, YitT family COG1284; Uncharacterized protein conserved in bacteria (DUF2179); hypothetical protein complement(1370922..1371857) Sphaerochaeta coccoides DSM 17374 10495502 YP_004411778.1 CDS Spico_1183 NC_015436.1 1372040 1373653 R COGs: COG0246 Mannitol-1-phosphate/altronate dehydrogenase; InterPro IPR013131:IPR013118; KEGG: cpy:Cphy_1062 mannitol dehydrogenase domain-containing protein; PFAM: Mannitol dehydrogenase, C-terminal; Mannitol dehydrogenase, N-terminal; PRIAM: Mannitol 2-dehydrogenase; SPTR: uncharacterized protein; IMG reference gene:2503957492; PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain; mannitol 2-dehydrogenase complement(1372040..1373653) Sphaerochaeta coccoides DSM 17374 10495503 YP_004411779.1 CDS Spico_1184 NC_015436.1 1373690 1374361 R COGs: COG1802 Transcriptional regulators; InterPro IPR000524:IPR011711; KEGG: amt:Amet_3789 GntR family transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; GntR, C-terminal; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal; SPTR: Transcriptional regulator, GntR family; IMG reference gene:2503957493; PFAM: Bacterial regulatory proteins, gntR family; FCD domain; GntR family transcriptional regulator complement(1373690..1374361) Sphaerochaeta coccoides DSM 17374 10495504 YP_004411780.1 CDS Spico_1185 NC_015436.1 1374390 1375475 R COGs: COG1312 D-mannonate dehydratase; HAMAP: Mannonate dehydratase; InterPro IPR004628; KEGG: bpb:bpr_I0685 D-mannonate dehydratase UxuA; PFAM: Mannonate dehydratase; PRIAM: Mannonate dehydratase; SPTR: uncharacterized protein; TIGRFAM: Mannonate dehydratase; IMG reference gene:2503957494; PFAM: D-mannonate dehydratase (UxuA); TIGRFAM: mannonate dehydratase; D-mannonate dehydratase complement(1374390..1375475) Sphaerochaeta coccoides DSM 17374 10495505 YP_004411781.1 CDS Spico_1186 NC_015436.1 1375648 1376607 R InterPro IPR000182; KEGG: ssm:Spirs_3745 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: uncharacterized protein; IMG reference gene:2503957495; PFAM: Acetyltransferase (GNAT) family; Uncharacterised protein family (UPF0158); N-acetyltransferase GCN5 complement(1375648..1376607) Sphaerochaeta coccoides DSM 17374 10495506 YP_004411782.1 CDS Spico_1187 NC_015436.1 1376814 1378109 D COGs: COG0148 Enolase; HAMAP: Enolase; InterPro IPR000941:IPR020811:IPR020810; KEGG: ssm:Spirs_3747 enolase; PFAM: Enolase, C-terminal; Enolase, N-terminal; PRIAM: Phosphopyruvate hydratase; SPTR: Enolase; TIGRFAM: Enolase; IMG reference gene:2503957496; PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase; enolase 1376814..1378109 Sphaerochaeta coccoides DSM 17374 10495507 YP_004411783.1 CDS Spico_1188 NC_015436.1 1378212 1379996 R COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006104; KEGG: sro:Sros_3323 beta-galactosidase; PFAM: Glycoside hydrolase, family 2, carbohydrate-binding; SPTR: Glycoside hydrolase 2 sugar binding; IMG reference gene:2503957497; PFAM: Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain; glycoside hydrolase 2 sugar binding protein complement(1378212..1379996) Sphaerochaeta coccoides DSM 17374 10495508 YP_004411784.1 CDS Spico_1189 NC_015436.1 1379993 1381303 R InterPro IPR011701; KEGG: sro:Sros_3322 hypothetical protein; PFAM: Major facilitator superfamily MFS-1; SPTR: uncharacterized protein; IMG reference gene:2503957498; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein complement(1379993..1381303) Sphaerochaeta coccoides DSM 17374 10495509 YP_004411785.1 CDS Spico_1190 NC_015436.1 1381514 1382119 R COGs: COG2137 conserved hypothetical protein; HAMAP: Regulatory protein RecX; InterPro IPR003783; KEGG: ssm:Spirs_3751 regulatory protein RecX; PFAM: Regulatory protein RecX; SPTR: Regulatory protein recX; IMG reference gene:2503957499; PFAM: RecX family; Regulatory protein recX complement(1381514..1382119) Sphaerochaeta coccoides DSM 17374 10495510 YP_004411786.1 CDS Spico_1191 NC_015436.1 1382144 1382563 R COGs: COG0103 Ribosomal protein S9; InterPro IPR000754; KEGG: ssm:Spirs_3752 ribosomal protein S9; PFAM: Ribosomal protein S9; SPTR: 30S ribosomal protein S9; IMG reference gene:2503957500; PFAM: Ribosomal protein S9/S16; 30S ribosomal protein S9 complement(1382144..1382563) Sphaerochaeta coccoides DSM 17374 10495511 YP_004411787.1 CDS Spico_1192 NC_015436.1 1382574 1383002 R COGs: COG0102 Ribosomal protein L13; InterPro IPR005822:IPR005823; KEGG: ssm:Spirs_3753 ribosomal protein L13; PFAM: Ribosomal protein L13; SPTR: 50S ribosomal protein L13; TIGRFAM: Ribosomal protein L13, bacterial-type; IMG reference gene:2503957501; PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type; 50S ribosomal protein L13 complement(1382574..1383002) Sphaerochaeta coccoides DSM 17374 10495512 YP_004411788.1 CDS Spico_1193 NC_015436.1 1383179 1384015 R KEGG: sta:STHERM_c21200 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957502; PFAM: Aminotransferase class-III; hypothetical protein complement(1383179..1384015) Sphaerochaeta coccoides DSM 17374 10495513 YP_004411789.1 CDS Spico_1194 NC_015436.1 1384019 1386445 R COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR000212; KEGG: ssm:Spirs_3757 UvrD/REP helicase; PFAM: DNA helicase, UvrD/REP type; SPTR: DNA helicase; IMG reference gene:2503957503; PFAM: UvrD/REP helicase; UvrD/REP helicase complement(1384019..1386445) Sphaerochaeta coccoides DSM 17374 10495514 YP_004411790.1 CDS Spico_1195 NC_015436.1 1386442 1387818 R COGs: COG0621 2-methylthioadenine synthetase; HAMAP: Ribosomal protein S12 methylthiotransferase RimO; InterProIPR005840:IPR013848:IPR007197:IPR005839:IPR 006638; KEGG: sta:STHERM_c21230 hypothetical protein; PFAM: Methylthiotransferase, N-terminal; Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: uncharacterized protein; TIGRFAM: Ribosomal protein S12 methylthiotransferase RimO; Methylthiotransferase; IMG reference gene:2503957504; PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: ribosomal protein S12 methylthiotransferase RimO; radical SAM methylthiotransferase, MiaB/RimO family; Ribosomal protein S12 methylthiotransferase rimO complement(1386442..1387818) Sphaerochaeta coccoides DSM 17374 10495515 YP_004411791.1 CDS Spico_1196 NC_015436.1 1388008 1388937 D COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: sta:STHERM_c02770 oligopeptide ABC transporter permease; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Oligopeptide ABC transporter, permease; IMG reference gene:2503957505; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 1388008..1388937 Sphaerochaeta coccoides DSM 17374 10495516 YP_004411792.1 CDS Spico_1197 NC_015436.1 1388952 1390589 D COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: sta:STHERM_c02780 oligopeptide ABC transporter permease, inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Oligopeptide ABC transporter, permease, inner membrane component; IMG reference gene:2503957506; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 1388952..1390589 Sphaerochaeta coccoides DSM 17374 10495517 YP_004411793.1 CDS Spico_1198 NC_015436.1 1390599 1391684 D COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterPro IPR003439:IPR013563:IPR010066:IPR003593; KEGG: sta:STHERM_c02790 oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; PRIAM: Nickel-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; IMG reference gene:2503957507; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; peptide ABC transporter ATPase 1390599..1391684 Sphaerochaeta coccoides DSM 17374 10495518 YP_004411794.1 CDS Spico_1199 NC_015436.1 1391681 1392808 D COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003439:IPR013563:IPR010066:IPR003593; KEGG: sta:STHERM_c02800 oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; PRIAM: Nickel-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Oligopeptide transporter; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; IMG reference gene:2503957508; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; peptide ABC transporter ATPase 1391681..1392808 Sphaerochaeta coccoides DSM 17374 10495519 YP_004411795.1 CDS Spico_1200 NC_015436.1 1392858 1393421 R KEGG: pst:PSPTO_3747 drug resistance transporter, EmrB/QacA family; SPTR: Cytochrome b; IMG reference gene:2503957509; hypothetical protein complement(1392858..1393421) Sphaerochaeta coccoides DSM 17374 10495520 YP_004411796.1 CDS Spico_1201 NC_015436.1 1393703 1395385 D COGs: COG4166 ABC-type oligopeptide transport system periplasmic component; InterPro IPR000914; KEGG: sta:STHERM_c02760 oligopeptide ABC transporter periplasmic oligopeptide-binding protein; PFAM: Bacterial extracellular solute-binding protein, family 5; SPTR: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein; IMG reference gene:2503957510; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; ABC transporter substrate-binding protein 1393703..1395385 Sphaerochaeta coccoides DSM 17374 10495521 YP_004411797.1 CDS Spico_1203 NC_015436.1 1395917 1396642 D COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: bha:BH0818 bacitracin ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Polyamine-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: uncharacterized protein; IMG reference gene:2503957512; PFAM: ABC transporter; polyamine-transporting ATPase 1395917..1396642 Sphaerochaeta coccoides DSM 17374 10495523 YP_004411798.1 CDS Spico_1204 NC_015436.1 1396639 1397343 D KEGG: ere:EUBREC_3043 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957513; hypothetical protein 1396639..1397343 Sphaerochaeta coccoides DSM 17374 10495524 YP_004411799.1 CDS Spico_1205 NC_015436.1 1397508 1398851 R COGs: COG1486 Alpha-galactosidase/6-phospho-beta-glucosidase 4 of glycosyl hydrolase; InterPro IPR001088; KEGG: csc:Csac_2748 glycoside hydrolase; PFAM: Glycoside hydrolase, family 4; PRIAM: Alpha-galactosidase; SPTR: Glycoside hydrolase 4; IMG reference gene:2503957514; PFAM: Family 4 glycosyl hydrolase; Family 4 glycosyl hydrolase C-terminal domain; alpha-galactosidase complement(1397508..1398851) Sphaerochaeta coccoides DSM 17374 10495525 YP_004411800.1 CDS Spico_1206 NC_015436.1 1398976 1399713 D COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR001789:IPR000005:IPR018060; KEGG: cpy:Cphy_0618 two component AraC family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; Signal transduction response regulator, receiver domain; SPTR: Two component transcriptional regulator, AraC family; IMG reference gene:2503957515; PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator 1398976..1399713 Sphaerochaeta coccoides DSM 17374 10495526 YP_004411801.1 CDS Spico_1208 NC_015436.1 1401384 1402229 R COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: ate:Athe_2374 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503957517; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 2 complement(1401384..1402229) Sphaerochaeta coccoides DSM 17374 10495528 YP_004411802.1 CDS Spico_1209 NC_015436.1 1402226 1403110 R COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: ate:Athe_2375 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport system inner membrane component; IMG reference gene:2503957518; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein complement(1402226..1403110) Sphaerochaeta coccoides DSM 17374 10495529 YP_004411803.1 CDS Spico_1210 NC_015436.1 1403218 1404492 R COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: ate:Athe_2376 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein family 1; IMG reference gene:2503957519; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein complement(1403218..1404492) Sphaerochaeta coccoides DSM 17374 10495530 YP_004411804.1 CDS Spico_1211 NC_015436.1 1404641 1405678 R COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: tit:Thit_2120 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: uncharacterized protein; IMG reference gene:2503957520; PFAM: NAD dependent epimerase/dehydratase; Sorbitol phosphotransferase enzyme II N-terminus; NAD-dependent epimerase/dehydratase complement(1404641..1405678) Sphaerochaeta coccoides DSM 17374 10495531 YP_004411805.1 CDS Spico_1212 NC_015436.1 1405965 1406543 D KEGG: cbe:Cbei_3173 TetR family transcriptional regulator; SPTR: Transcriptional regulator, TetR family; IMG reference gene:2503957521; TetR family transcriptional regulator 1405965..1406543 Sphaerochaeta coccoides DSM 17374 10495532 YP_004411806.1 CDS Spico_1213 NC_015436.1 1406571 1407557 R COGs: COG0095 Lipoate-protein ligase A; InterPro IPR004143:IPR019491:IPR004562; KEGG: cby:CLM_1876 lipoate-protein ligase A; PFAM: Biotin/lipoate A/B protein ligase; Lipoate protein ligase, C-terminal; SPTR: Lipoate--protein ligase; TIGRFAM: Lipoyltransferase/lipoate-protein ligase; IMG reference gene:2503957522; PFAM: Bacterial lipoate protein ligase C-terminus; Biotin/lipoate A/B protein ligase; TIGRFAM: lipoyltransferase and lipoate-protein ligase; lipoyltransferase and lipoate-protein ligase complement(1406571..1407557) Sphaerochaeta coccoides DSM 17374 10495533 YP_004411807.1 CDS Spico_1214 NC_015436.1 1407662 1409059 R COGs: COG1003 Glycine cleavage system protein P (pyridoxal-binding) C-terminal domain; InterPro IPR005814; KEGG: csh:Closa_1529 glycine dehydrogenase subunit 2; PFAM: Aminotransferase class-III; SPTR: uncharacterized protein; IMG reference gene:2503957523; PFAM: Glycine cleavage system P-protein; glycine dehydrogenase subunit beta complement(1407662..1409059) Sphaerochaeta coccoides DSM 17374 10495534 YP_004411808.1 CDS Spico_1215 NC_015436.1 1409059 1410378 R COGs: COG0403 Glycine cleavage system protein P (pyridoxal-binding) N-terminal domain; HAMAP: Glycine cleavage system P protein, subunit 1, InterPro IPR023010:IPR020580; KEGG: cpy:Cphy_1540 glycine dehydrogenase (decarboxylating); PFAM: Glycine cleavage system P-protein, N-terminal; PRIAM: Glycine dehydrogenase (decarboxylating); SPTR: uncharacterized protein; IMG reference gene:2503957524; PFAM: Glycine cleavage system P-protein; glycine dehydrogenase subunit alpha complement(1409059..1410378) Sphaerochaeta coccoides DSM 17374 10495535 YP_004411809.1 CDS Spico_1216 NC_015436.1 1410378 1410755 R COGs: COG0509 Glycine cleavage system H protein (lipoate-binding); HAMAP: Glycine cleavage H-protein; InterPro IPR002930:IPR017453; KEGG: psa:PST_4063 glycine cleavage system protein H; PFAM: Glycine cleavage H-protein; SPTR: Glycine cleavage system H protein; TIGRFAM: Glycine cleavage H-protein, subgroup; IMG reference gene:2503957525; PFAM: Glycine cleavage H-protein; TIGRFAM: glycine cleavage system H protein; Glycine cleavage system H protein complement(1410378..1410755) Sphaerochaeta coccoides DSM 17374 10495536 YP_004411810.1 CDS Spico_1217 NC_015436.1 1410834 1411919 R COGs: COG0404 Glycine cleavage system T protein (aminomethyltransferase); HAMAP: Aminomethyltransferase; InterPro IPR022903:IPR006222:IPR013977:IPR006223; KEGG: cpy:Cphy_1538 glycine cleavage system T protein; PFAM: Glycine cleavage T-protein, N-terminal; Glycine cleavage T-protein, C-terminal barrel; PRIAM: Aminomethyltransferase; SPTR: Aminomethyltransferase; TIGRFAM: Glycine cleavage system T protein; IMG reference gene:2503957526; PFAM: Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; TIGRFAM: glycine cleavage system T protein; glycine cleavage system protein T complement(1410834..1411919) Sphaerochaeta coccoides DSM 17374 10495537 YP_004411811.1 CDS Spico_1218 NC_015436.1 1412431 1412823 R InterPro IPR000086; KEGG: acl:ACL_1086 NTP pyrophosphohydrolase; PFAM: NUDIX hydrolase domain; SPTR: uncharacterized protein; IMG reference gene:2503957527; PFAM: NUDIX domain; TIGRFAM: mutator mutT protein; NUDIX hydrolase complement(1412431..1412823) Sphaerochaeta coccoides DSM 17374 10495538 YP_004411812.1 CDS Spico_1219 NC_015436.1 1413183 1414118 R COGs: COG0679 permease; InterPro IPR004776; KEGG: ckr:CKR_1800 hypothetical protein; PFAM: Auxin efflux carrier; SPTR: uncharacterized protein; IMG reference gene:2503957528; PFAM: Membrane transport protein; auxin efflux carrier family protein complement(1413183..1414118) Sphaerochaeta coccoides DSM 17374 10495539 YP_004411813.1 CDS Spico_1220 NC_015436.1 1414368 1415387 R COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family; InterPro IPR001155; KEGG: cbe:Cbei_0562 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; PRIAM: NADPH dehydrogenase; SPTR: NADH:flavin oxidoreductase/NADH oxidase; IMG reference gene:2503957529; PFAM: NADH:flavin oxidoreductase / NADH oxidase; NADPH dehydrogenase complement(1414368..1415387) Sphaerochaeta coccoides DSM 17374 10495540 YP_004411814.1 CDS Spico_1221 NC_015436.1 1415485 1416366 D COGs: COG0225 Peptide methionine sulfoxide reductase; HAMAP: Peptide methionine sulphoxide reductase MsrA; InterPro IPR002569:IPR002579; KEGG: cbc:CbuK_1170 bifunctional methionine sulfoxide reductase B/A protein; PFAM: Peptide methionine sulphoxide reductase MsrA; Methionine sulphoxide reductase B; SPTR: Methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase; TIGRFAM: Peptide methionine sulphoxide reductase MsrA; IMG reference gene:2503957530; PFAM: SelR domain; Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; methionine-R-sulfoxide reductase; peptide methionine sulfoxide reductase 1415485..1416366 Sphaerochaeta coccoides DSM 17374 10495541 YP_004411815.1 CDS Spico_1222 NC_015436.1 1416653 1417474 D COGs: COG0428 divalent heavy-metal cations transporter; InterPro IPR003689; KEGG: cce:Ccel_1427 zinc/iron permease; PFAM: Zinc/iron permease; SPTR: Zinc/iron permease; IMG reference gene:2503957531; PFAM: ZIP Zinc transporter; zinc/iron permease 1416653..1417474 Sphaerochaeta coccoides DSM 17374 10495542 YP_004411816.1 CDS Spico_1223 NC_015436.1 1417581 1419179 R COGs: COG1295 membrane protein; InterPro IPR004664:IPR017039; KEGG: acd:AOLE_02310 tRNA-processing ribonuclease BN(RNase BN); PFAM: Ribonuclease BN-related; SPTR: Ribonuclease; TIGRFAM: Ribonuclease BN; IMG reference gene:2503957532; PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN); ribonuclease BN complement(1417581..1419179) Sphaerochaeta coccoides DSM 17374 10495543 YP_004411817.1 CDS Spico_1224 NC_015436.1 1419186 1420115 R COGs: COG2267 Lysophospholipase; InterPro IPR000073; KEGG: amt:Amet_0462 alpha/beta hydrolase fold; PFAM: Alpha/beta hydrolase fold-1; SPTR: PLA depolymerase; IMG reference gene:2503957533; PFAM: lysophospholipase; alpha/beta hydrolase complement(1419186..1420115) Sphaerochaeta coccoides DSM 17374 10495544 YP_004411818.1 CDS Spico_1225 NC_015436.1 1420273 1420809 D COGs: COG0622 phosphoesterase; InterPro IPR004843; KEGG: mta:Moth_0919 phosphodiesterase; PFAM: Metallo-dependent phosphatase; SPTR: uncharacterized protein; IMG reference gene:2503957534; PFAM: Calcineurin-like phosphoesterase; TIGRFAM: phosphoesterase, MJ0936 family; metallophosphoesterase 1420273..1420809 Sphaerochaeta coccoides DSM 17374 10495545 YP_004411819.1 CDS Spico_1226 NC_015436.1 1421123 1423531 D COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR011110:IPR000408; KEGG: mxa:MXAN_0889 RCC1 repeat-containing protein; PFAM: Listeria/Bacterioides repeat; Two component regulator propeller; Regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; IMG reference gene:2503957535; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; hypothetical protein 1421123..1423531 Sphaerochaeta coccoides DSM 17374 10495546 YP_004411820.1 CDS Spico_1227 NC_015436.1 1423602 1425542 R COGs: COG2414 Aldehyde:ferredoxin oxidoreductase; InterPro IPR013983:IPR001203; KEGG: dol:Dole_1771 aldehyde ferredoxin oxidoreductase; PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal; Aldehyde ferredoxin oxidoreductase, C-terminal; PRIAM: Aldehyde ferredoxin oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase, N-terminal; SPTR: Aldehyde ferredoxin oxidoreductase; IMG reference gene:2503957536; PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3; aldehyde ferredoxin oxidoreductase complement(1423602..1425542) Sphaerochaeta coccoides DSM 17374 10495547 YP_004411821.1 CDS Spico_1228 NC_015436.1 1425711 1427471 D COGs: COG0572 Uridine kinase; InterPro IPR003593; KEGG: ssm:Spirs_3160 AAA ATPase; SMART: ATPase, AAA+ type, core; SPTR: Uridine kinase; IMG reference gene:2503957537; PFAM: Phosphoribulokinase / Uridine kinase; ATPase AAA 1425711..1427471 Sphaerochaeta coccoides DSM 17374 10495548 YP_004411822.1 CDS Spico_1229 NC_015436.1 1427534 1428673 R COGs: COG3177 conserved hypothetical protein; InterPro IPR003812; KEGG: gox:GOX2572 hypothetical protein; PFAM: Filamentation induced by cAMP/death on curing-related; SPTR: uncharacterized protein; IMG reference gene:2503957538; PFAM: Fic/DOC family; Fic family protein complement(1427534..1428673) Sphaerochaeta coccoides DSM 17374 10495549 YP_004411823.1 CDS Spico_1230 NC_015436.1 1428868 1429239 R COGs: COG2983 conserved hypothetical protein; KEGG: ssm:Spirs_3171 protein of unknown function UPF0153; SPTR: cytoplasmic protein; manually curated; IMG reference gene:2503957539; hypothetical protein complement(1428868..1429239) Sphaerochaeta coccoides DSM 17374 10495550 YP_004411824.1 CDS Spico_1231 NC_015436.1 1429248 1430069 R COGs: COG0496 acid phosphatase; HAMAP: Survival protein SurE-like phosphatase/nucleotidase; InterPro IPR002828; KEGG: ssm:Spirs_3174 stationary-phase survival protein SurE; PFAM: Survival protein SurE-like phosphatase/nucleotidase; SPTR: 5'-nucleotidase surE; TIGRFAM: Survival protein SurE-like phosphatase/nucleotidase; IMG reference gene:2503957540; PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE; multifunctional protein surE complement(1429248..1430069) Sphaerochaeta coccoides DSM 17374 10495551 YP_004411825.1 CDS Spico_1232 NC_015436.1 1430066 1431235 R COGs: COG0153 Galactokinase; KEGG: ssm:Spirs_3175 galactokinase; PRIAM: Galactokinase; SPTR: uncharacterized protein; IMG reference gene:2503957541; PFAM: Galactokinase galactose-binding signature; galactokinase complement(1430066..1431235) Sphaerochaeta coccoides DSM 17374 10495552 YP_004411826.1 CDS Spico_1233 NC_015436.1 1431373 1431576 R COGs: COG0254 Ribosomal protein L31; HAMAP: Ribosomal protein L31; InterPro IPR002150; KEGG: ssm:Spirs_3178 ribosomal protein L31; PFAM: Ribosomal protein L31; SPTR: 50S ribosomal protein L31; TIGRFAM: Ribosomal protein L31; IMG reference gene:2503957542; PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31; 50S ribosomal protein L31 complement(1431373..1431576) Sphaerochaeta coccoides DSM 17374 10495553 YP_004411827.1 CDS Spico_1234 NC_015436.1 1431664 1433793 R COGs: COG1158 Transcription termination factor; InterProIPR011112:IPR011129:IPR003593:IPR004665:IPR 011113:IPR000194; KEGG: ssm:Spirs_3179 transcription termination factor Rho; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; Rho termination factor, RNA-binding; SMART: Cold shock protein; Rho termination factor, N-terminal; ATPase, AAA+ type, core; SPTR: Transcription termination factor Rho; TIGRFAM: Transcription termination factor Rho; IMG reference gene:2503957543; PFAM: Rho termination factor, N-terminal domain; Rho termination factor, RNA-binding domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: transcription termination factor Rho; transcription termination factor Rho complement(1431664..1433793) Sphaerochaeta coccoides DSM 17374 10495554 YP_004411828.1 CDS Spico_1235 NC_015436.1 1433995 1435284 R COGs: COG1546 Uncharacterized protein (competence- and mitomycin-induced); InterPro IPR001453:IPR008136; KEGG: ssm:Spirs_3180 competence/damage-inducible protein CinA; PFAM: CinA, C-terminal; Molybdopterin binding; SMART: Molybdopterin binding; SPTR: CinA-like protein; TIGRFAM: CinA, C-terminal; IMG reference gene:2503957544; PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-terminal domain; molybdenum cofactor synthesis domain; CinA domain-containing protein complement(1433995..1435284) Sphaerochaeta coccoides DSM 17374 10495555 YP_004411829.1 CDS Spico_1236 NC_015436.1 1435286 1437025 R COGs: COG0815 Apolipoprotein N-acyltransferase; HAMAP: Apolipoprotein N-acyltransferase; InterPro IPR004563:IPR003010; KEGG: ssm:Spirs_3184 apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: uncharacterized protein; TIGRFAM: Apolipoprotein N-acyltransferase; IMG reference gene:2503957545; PFAM: Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase complement(1435286..1437025) Sphaerochaeta coccoides DSM 17374 10495556 YP_004411830.1 CDS Spico_1237 NC_015436.1 1437064 1437378 R COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119; KEGG: ssm:Spirs_3185 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein; SPTR: DNA-binding protein HbbU; IMG reference gene:2503957546; PFAM: Bacterial DNA-binding protein; histone family protein DNA-binding protein complement(1437064..1437378) Sphaerochaeta coccoides DSM 17374 10495557 YP_004411831.1 CDS Spico_1238 NC_015436.1 1437683 1437958 R HAMAP: Ribosomal protein S20; InterPro IPR002583; KEGG: sta:STHERM_c18580 30S ribosomal protein S20; PFAM: Ribosomal protein S20; SPTR: 30S ribosomal protein S20; TIGRFAM: Ribosomal protein S20; IMG reference gene:2503957547; PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20; 30S ribosomal protein S20 complement(1437683..1437958) Sphaerochaeta coccoides DSM 17374 10495558 YP_004411832.1 CDS Spico_1239 NC_015436.1 1438114 1439346 R COGs: COG1774 Uncharacterized homolog of PSP1; InterPro IPR007557; KEGG: sta:STHERM_c18600 hypothetical protein; PFAM: PSP1, C-terminal; SPTR: uncharacterized protein; IMG reference gene:2503957548; PFAM: PSP1 C-terminal conserved region; PSP1 domain-containing protein complement(1438114..1439346) Sphaerochaeta coccoides DSM 17374 10495559 YP_004411833.1 CDS Spico_1240 NC_015436.1 1439527 1440720 R COGs: COG0738 Fucose permease; InterPro IPR011701; KEGG: csh:Closa_1055 major facilitator superfamily MFS_1; PFAM: Major facilitator superfamily MFS-1; SPTR: uncharacterized protein; IMG reference gene:2503957549; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein complement(1439527..1440720) Sphaerochaeta coccoides DSM 17374 10495560 YP_004411834.1 CDS Spico_1242 NC_015436.1 1441771 1442550 D COGs: COG0084 Mg-dependent DNase; InterPro IPR015991:IPR001130; KEGG: ssm:Spirs_3191 hydrolase, TatD family; PFAM: Deoxyribonuclease, TatD-related; SPTR: uncharacterized protein; TIGRFAM: Deoxyribonuclease, TatD Mg-dependent, prokaryote; IMG reference gene:2503957551; PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family; TatD family hydrolase 1441771..1442550 Sphaerochaeta coccoides DSM 17374 10495562 YP_004411835.1 CDS Spico_1243 NC_015436.1 1442581 1443612 D COGs: COG0042 tRNA-dihydrouridine synthase; InterPro IPR004652:IPR001269; KEGG: ssm:Spirs_3192 TIM-barrel protein, nifR3 family; PFAM: tRNA-dihydrouridine synthase; SPTR: tRNA-dihydrouridine synthase B; TIGRFAM: tRNA-dihydrouridine synthase, TIM-barrel, NifR3; IMG reference gene:2503957552; PFAM: Dihydrouridine synthase (Dus); TIGRFAM: TIM-barrel protein, nifR3 family; nitrogen regulator protein NIfR3 1442581..1443612 Sphaerochaeta coccoides DSM 17374 10495563 YP_004411836.1 CDS Spico_1244 NC_015436.1 1443605 1443748 D KEGG: pmy:Pmen_3843 alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase fold; IMG reference gene:2503957553; hypothetical protein 1443605..1443748 Sphaerochaeta coccoides DSM 17374 10495564 YP_004411837.1 CDS Spico_1245 NC_015436.1 1443830 1445098 D COGs: COG0151 Phosphoribosylamine-glycine ligase; InterPro IPR000115:IPR020562:IPR020561:IPR020560; KEGG: ssm:Spirs_3193 phosphoribosylamine/glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C-domain; PRIAM: Phosphoribosylamine--glycine ligase; SPTR: Phosphoribosylamine--glycine ligase; TIGRFAM: Phosphoribosylglycinamide synthetase; IMG reference gene:2503957554; PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase; phosphoribosylamine--glycine ligase 1443830..1445098 Sphaerochaeta coccoides DSM 17374 10495565 YP_004411838.1 CDS Spico_1246 NC_015436.1 1445320 1447761 D COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR011110:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Listeria/Bacterioides repeat; Two component regulator propeller; Regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; IMG reference gene:2503957555; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; hypothetical protein 1445320..1447761 Sphaerochaeta coccoides DSM 17374 10495566 YP_004411839.1 CDS Spico_1247 NC_015436.1 1447997 1448986 R COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR023210; KEGG: gym:GYMC10_1614 aldo/keto reductase; PFAM: NADP-dependent oxidoreductase domain; SPTR: Aldo/keto reductase; IMG reference gene:2503957556; PFAM: Aldo/keto reductase; NADP-dependent oxidoreductase domain-containing protein complement(1447997..1448986) Sphaerochaeta coccoides DSM 17374 10495567 YP_004411840.1 CDS Spico_1248 NC_015436.1 1449087 1450826 R KEGG: ssm:Spirs_4225 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957557; hypothetical protein complement(1449087..1450826) Sphaerochaeta coccoides DSM 17374 10495568 YP_004411841.1 CDS Spico_1249 NC_015436.1 1450879 1451661 R COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: ccb:Clocel_3670 undecaprenyl-phosphate glucose phosphotransferase; PFAM: Bacterial sugar transferase; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; SPTR: uncharacterized protein; IMG reference gene:2503957558; PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; UDP-phosphate galactose phosphotransferase complement(1450879..1451661) Sphaerochaeta coccoides DSM 17374 10495569 YP_004411842.1 CDS Spico_1250 NC_015436.1 1451854 1452798 R KEGG: xca:xccb100_1061 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957559; hypothetical protein complement(1451854..1452798) Sphaerochaeta coccoides DSM 17374 10495570 YP_004411843.1 CDS Spico_1251 NC_015436.1 1453538 1455679 D COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR011110:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; Two component regulator propeller; SPTR: Alpha-tubulin suppressor and related RCC1 domain-containing protein-like protein; IMG reference gene:2503957560; PFAM: Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 1453538..1455679 Sphaerochaeta coccoides DSM 17374 10495571 YP_004411844.1 CDS Spico_1252 NC_015436.1 1455803 1457308 R InterPro IPR011435; KEGG: csh:Closa_3302 protein of unknown function DUF1538; PFAM: Protein of unknown function DUF1538; SPTR: uncharacterized protein; IMG reference gene:2503957561; PFAM: Protein of unknown function (DUF1538); hypothetical protein complement(1455803..1457308) Sphaerochaeta coccoides DSM 17374 10495572 YP_004411845.1 CDS Spico_1254 NC_015436.1 1457638 1458657 R COGs: COG1088 dTDP-D-glucose 4 6-dehydratase; InterPro IPR005888:IPR001509; KEGG: cbe:Cbei_4754 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: dTDP-glucose 4,6-dehydratase; SPTR: dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; IMG reference gene:2503957563; PFAM: NAD dependent epimerase/dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase complement(1457638..1458657) Sphaerochaeta coccoides DSM 17374 10495574 YP_004411846.1 CDS Spico_1255 NC_015436.1 1458843 1459727 R COGs: COG0524 Sugar kinase ribokinase; InterPro IPR011611; KEGG: ssm:Spirs_1177 PfkB domain protein; PFAM: Carbohydrate/purine kinase; PRIAM: Ribokinase; SPTR: uncharacterized protein; IMG reference gene:2503957564; PFAM: pfkB family carbohydrate kinase; TIGRFAM: ribokinase; Ribokinase complement(1458843..1459727) Sphaerochaeta coccoides DSM 17374 10495575 YP_004411847.1 CDS Spico_1256 NC_015436.1 1459915 1460970 R COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: dsh:Dshi_0528 ribose/xylose/arabinose/galactoside ABC-type transport system protein; PFAM: ABC transporter permease; SPTR: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; IMG reference gene:2503957565; PFAM: Branched-chain amino acid transport system / permease component; inner-membrane translocator complement(1459915..1460970) Sphaerochaeta coccoides DSM 17374 10495576 YP_004411848.1 CDS Spico_1257 NC_015436.1 1460967 1462004 R COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: dsh:Dshi_0529 ribose/xylose/arabinose/galactoside ABC-type transport system protein; PFAM: ABC transporter permease; SPTR: uncharacterized protein; IMG reference gene:2503957566; PFAM: Branched-chain amino acid transport system / permease component; monosaccharide ABC transporter membrane protein, CUT2 family complement(1460967..1462004) Sphaerochaeta coccoides DSM 17374 10495577 YP_004411849.1 CDS Spico_1258 NC_015436.1 1462021 1463508 R COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: azl:AZL_b05830 simple sugar transport system ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-); IMG reference gene:2503957567; PFAM: ABC transporter; monosaccharide ABC transporter ATP-binding protein, CUT2 family complement(1462021..1463508) Sphaerochaeta coccoides DSM 17374 10495578 YP_004411850.1 CDS Spico_1259 NC_015436.1 1463601 1464605 R COGs: COG1879 ABC-type sugar transport system periplasmic component; KEGG: dsh:Dshi_0531 ribose/xylose/arabinose/galactoside ABC-type transport system protein; SPTR: uncharacterized protein; IMG reference gene:2503957568; PFAM: family; monosaccharide ABC transporter substrate-binding protein, CUT2 family complement(1463601..1464605) Sphaerochaeta coccoides DSM 17374 10495579 YP_004411851.1 CDS Spico_1260 NC_015436.1 1464819 1465871 D COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: dap:Dacet_0215 transcriptional regulator, LacI family; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI; SPTR: Transcriptional regulator, LacI family; IMG reference gene:2503957569; PFAM: Bacterial regulatory proteins, lacI family; family; LacI family transcriptional regulator 1464819..1465871 Sphaerochaeta coccoides DSM 17374 10495580 YP_004411852.1 CDS Spico_1261 NC_015436.1 1465868 1466845 D COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: pwa:Pecwa_2644 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel; IMG reference gene:2503957570; PFAM: Xylose isomerase-like TIM barrel; xylose isomerase domain-containing protein 1465868..1466845 Sphaerochaeta coccoides DSM 17374 10495581 YP_004411853.1 CDS Spico_1262 NC_015436.1 1466887 1469937 R InterPro IPR011493; KEGG: swo:Swol_1078 Ig-like domain-containing protein; SPTR: Surface proteins containing Ig-like domains-like; IMG reference gene:2503957571; PFAM: The GLUG motif; hypothetical protein complement(1466887..1469937) Sphaerochaeta coccoides DSM 17374 10495582 YP_004411854.1 CDS Spico_1263 NC_015436.1 1469981 1470937 R KEGG: bfr:BF3846 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957572; hypothetical protein complement(1469981..1470937) Sphaerochaeta coccoides DSM 17374 10495583 YP_004411855.1 CDS Spico_1264 NC_015436.1 1471137 1472813 D KEGG: bfs:BF1484 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957573; hypothetical protein 1471137..1472813 Sphaerochaeta coccoides DSM 17374 10495584 YP_004411856.1 CDS Spico_1265 NC_015436.1 1472813 1473289 D KEGG: mpi:Mpet_0889 extracellular solute-binding protein family 5; SPTR: uncharacterized protein; IMG reference gene:2503957574; hypothetical protein 1472813..1473289 Sphaerochaeta coccoides DSM 17374 10495585 YP_004411857.1 CDS Spico_1266 NC_015436.1 1473286 1474248 D COGs: COG4571 Outer membrane protease; KEGG: tde:TDE2032 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957575; PFAM: Omptin family; hypothetical protein 1473286..1474248 Sphaerochaeta coccoides DSM 17374 10495586 YP_004411858.1 CDS Spico_1267 NC_015436.1 1474287 1476596 R KEGG: spw:SPCG_1762 subtilisin-like serine protease; SPTR: uncharacterized protein; IMG reference gene:2503957576; PFAM: Subtilase; subtilisin-like serine protease complement(1474287..1476596) Sphaerochaeta coccoides DSM 17374 10495587 YP_004411859.1 CDS Spico_1268 NC_015436.1 1476593 1477636 R COGs: COG0464 ATPase of the AAA+ class; InterPro IPR003593:IPR003959; KEGG: mmy:MSC_1062 AAA ATPase; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; SPTR: AAA ATPase; IMG reference gene:2503957577; PFAM: ATPase associated with various cellular activities (AAA); ATPase AAA complement(1476593..1477636) Sphaerochaeta coccoides DSM 17374 10495588 YP_004411860.1 CDS Spico_1269 NC_015436.1 1477850 1478428 D COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005269; KEGG: gsu:GSU2766 decarboxylase; PFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; SPTR: Decarboxylase; TIGRFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; IMG reference gene:2503957578; PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein; TIGR00730 family protein; hypothetical protein 1477850..1478428 Sphaerochaeta coccoides DSM 17374 10495589 YP_004411861.1 CDS Spico_1270 NC_015436.1 1478531 1479448 R KEGG: tde:TDE0603 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957579; hypothetical protein complement(1478531..1479448) Sphaerochaeta coccoides DSM 17374 10495590 YP_004411862.1 CDS Spico_1272 NC_015436.1 1479975 1481738 R COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR001140:IPR003439; KEGG: cpy:Cphy_3379 ABC transporter transmembrane region; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter transmembrane protein; IMG reference gene:2503957582; PFAM: ABC transporter transmembrane region; ABC transporter; xenobiotic-transporting ATPase complement(1479975..1481738) Sphaerochaeta coccoides DSM 17374 10495593 YP_004411863.1 CDS Spico_1273 NC_015436.1 1481722 1483533 R COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR001140:IPR003439; KEGG: cpy:Cphy_3380 ABC transporter transmembrane region; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter transmembrane protein; IMG reference gene:2503957583; PFAM: ABC transporter transmembrane region; ABC transporter; xenobiotic-transporting ATPase complement(1481722..1483533) Sphaerochaeta coccoides DSM 17374 10495594 YP_004411864.1 CDS Spico_1274 NC_015436.1 1483530 1483994 R COGs: COG1846 Transcriptional regulators; InterPro IPR000835; KEGG: cdl:CDR20291_3067 MarR-family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Predicted protein; IMG reference gene:2503957584; PFAM: MarR family; MarR family transcriptional regulator complement(1483530..1483994) Sphaerochaeta coccoides DSM 17374 10495595 YP_004411865.1 CDS Spico_1275 NC_015436.1 1484273 1484911 R COGs: COG0698 Ribose 5-phosphate isomerase RpiB; InterPro IPR003500; KEGG: cpy:Cphy_0491 hypothetical protein; PFAM: Ribose/galactose isomerase; SPTR: uncharacterized protein; IMG reference gene:2503957585; PFAM: Ribose-5-phosphate isomerase; Ribose/Galactose Isomerase; Ribose/galactose isomerase complement(1484273..1484911) Sphaerochaeta coccoides DSM 17374 10495596 YP_004411866.1 CDS Spico_1276 NC_015436.1 1485137 1486924 D KEGG: tde:TDE1234 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957586; hypothetical protein 1485137..1486924 Sphaerochaeta coccoides DSM 17374 10495597 YP_004411867.1 CDS Spico_1277 NC_015436.1 1486928 1487938 R COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR018060:IPR000005; KEGG: bpb:bpr_III019 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: uncharacterized protein; IMG reference gene:2503957587; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator complement(1486928..1487938) Sphaerochaeta coccoides DSM 17374 10495598 YP_004411868.1 CDS Spico_1278 NC_015436.1 1488078 1490597 D KEGG: str:Sterm_4037 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957588; hypothetical protein 1488078..1490597 Sphaerochaeta coccoides DSM 17374 10495599 YP_004411869.1 CDS Spico_1279 NC_015436.1 1490757 1492028 D COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: str:Sterm_4038 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: uncharacterized protein; IMG reference gene:2503957589; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein 1490757..1492028 Sphaerochaeta coccoides DSM 17374 10495600 YP_004411870.1 CDS Spico_1280 NC_015436.1 1492121 1493002 D COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: scb:SCAB_8181 integral membrane binding-protein-dependent transport protein; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: uncharacterized protein; IMG reference gene:2503957590; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 1492121..1493002 Sphaerochaeta coccoides DSM 17374 10495601 YP_004411871.1 CDS Spico_1281 NC_015436.1 1493004 1493855 D COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: str:Sterm_4035 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: uncharacterized protein; IMG reference gene:2503957591; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 1493004..1493855 Sphaerochaeta coccoides DSM 17374 10495602 YP_004411872.1 CDS Spico_1282 NC_015436.1 1493916 1497113 D COGs: COG0383 Alpha-mannosidase; InterPro IPR015341:IPR000602:IPR011682; KEGG: tit:Thit_1713 glycosyl hydrolase 38 domain protein; PFAM: Glycoside hydrolase, family 38, core; Glycoside hydrolase, family 38, central domain; Glycosyl hydrolases 38, C-terminal; PRIAM: Alpha-mannosidase; SMART: Glycoside hydrolase, family 38, central domain; SPTR: Glycosyl hydrolase 38 domain protein; IMG reference gene:2503957592; PFAM: Glycosyl hydrolases family 38 C-terminal domain; Glycosyl hydrolases family 38 N-terminal domain; Alpha mannosidase, middle domain; alpha-mannosidase 1493916..1497113 Sphaerochaeta coccoides DSM 17374 10495603 YP_004411873.1 CDS Spico_1283 NC_015436.1 1497110 1498210 D COGs: COG4225 unsaturated glucuronyl hydrolase involved in regulation of surface properties and related protein; InterPro IPR010905; KEGG: bpb:bpr_III020 unsaturated rhamnogalacturonyl hydrolase Gh105C; PFAM: Glycosyl hydrolase, family 88; SPTR: uncharacterized protein; IMG reference gene:2503957593; PFAM: Glycosyl Hydrolase 88; glycosyl hydrolase 88 1497110..1498210 Sphaerochaeta coccoides DSM 17374 10495604 YP_004411874.1 CDS Spico_1284 NC_015436.1 1498707 1501145 D COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR011110:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Listeria/Bacterioides repeat; Two component regulator propeller; Regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; IMG reference gene:2503957594; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; hypothetical protein 1498707..1501145 Sphaerochaeta coccoides DSM 17374 10495605 YP_004411875.1 CDS Spico_1285 NC_015436.1 1501395 1501802 D COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310; KEGG: ddf:DEFDS_1906 histidine triad family protein; PFAM: Histidine triad (HIT) protein; SPTR: Histidine triad family protein; IMG reference gene:2503957595; PFAM: HIT domain; histidine triad (HIT) protein 1501395..1501802 Sphaerochaeta coccoides DSM 17374 10495606 YP_004411876.1 CDS Spico_1286 NC_015436.1 1501886 1502362 D COGs: COG1225 Peroxiredoxin; InterPro IPR000866; KEGG: hha:Hhal_0101 redoxin domain-containing protein; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; SPTR: Redoxin domain protein; IMG reference gene:2503957596; PFAM: AhpC/TSA family; alkyl hydroperoxide reductase 1501886..1502362 Sphaerochaeta coccoides DSM 17374 10495607 YP_004411877.1 CDS Spico_1287 NC_015436.1 1502359 1503471 D KEGG: sru:SRU_2861 endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase; IMG reference gene:2503957597; hypothetical protein 1502359..1503471 Sphaerochaeta coccoides DSM 17374 10495608 YP_004411878.1 CDS Spico_1288 NC_015436.1 1503501 1505201 R COGs: COG0072 Phenylalanyl-tRNA synthetase beta subunit; InterPro IPR005146:IPR005147:IPR004531; KEGG: ssm:Spirs_4135 phenylalanyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase, B5; PRIAM: Phenylalanine--tRNA ligase; SMART: tRNA synthetase, B5; B3/B4 tRNA-binding domain; SPTR: Phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic; IMG reference gene:2503957598; PFAM: tRNA synthetase B5 domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; phenylalanyl-tRNA synthetase subunit beta complement(1503501..1505201) Sphaerochaeta coccoides DSM 17374 10495609 YP_004411879.1 CDS Spico_1289 NC_015436.1 1505201 1506745 R COGs: COG0016 Phenylalanyl-tRNA synthetase alpha subunit; HAMAP: Phenylalanyl-tRNA synthetase alpha chain 2, bacterial/archaeal; InterPro IPR004529:IPR002319:IPR022917; KEGG: ssm:Spirs_4136 phenylalanyl-tRNA synthetase, alpha subunit; PFAM: Phenylalanyl-tRNA synthetase; SPTR: Phenylalanyl-tRNA synthetase, alpha subunit; TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit; IMG reference gene:2503957599; PFAM: tRNA synthetases class II core domain (F); TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; phenylalanyl-tRNA synthetase subunit alpha complement(1505201..1506745) Sphaerochaeta coccoides DSM 17374 10495610 YP_004411880.1 CDS Spico_1290 NC_015436.1 1506901 1507425 R KEGG: ckr:CKR_2225 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957600; hypothetical protein complement(1506901..1507425) Sphaerochaeta coccoides DSM 17374 10495611 YP_004411881.1 CDS Spico_1291 NC_015436.1 1507428 1508399 R COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: bhy:BHWA1_00926 oxidoreductase domain containing protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; PRIAM: Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase; SPTR: uncharacterized protein; IMG reference gene:2503957601; PFAM: Oxidoreductase, NAD-binding Rossmann fold; Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase complement(1507428..1508399) Sphaerochaeta coccoides DSM 17374 10495612 YP_004411882.1 CDS Spico_1292 NC_015436.1 1508475 1510508 R COGs: COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit; InterPro IPR005475:IPR001017:IPR005476; KEGG: jan:Jann_3081 dehydrogenase, E1 component; PFAM: Dehydrogenase, E1 component; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; PRIAM: Pyruvate dehydrogenase (acetyl-transferring); SMART: Transketolase-like, pyrimidine-binding domain; SPTR: Dehydrogenase E1 component; IMG reference gene:2503957602; PFAM: Dehydrogenase E1 component; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; pyruvate dehydrogenase complement(1508475..1510508) Sphaerochaeta coccoides DSM 17374 10495613 YP_004411883.1 CDS Spico_1293 NC_015436.1 1510604 1511191 R KEGG: sta:STHERM_c16640 flavoredoxin; SPTR: uncharacterized protein; IMG reference gene:2503957603; flavoredoxin complement(1510604..1511191) Sphaerochaeta coccoides DSM 17374 10495614 YP_004411884.1 CDS Spico_1294 NC_015436.1 1511375 1512055 D COGs: COG0634 Hypoxanthine-guanine phosphoribosyltransferase; InterPro IPR005904:IPR000836; KEGG: dae:Dtox_0723 hypoxanthine phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; PRIAM: Hypoxanthine phosphoribosyltransferase; SPTR: uncharacterized protein; TIGRFAM: Hypoxanthine phosphoribosyl transferase; IMG reference gene:2503957604; PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 1511375..1512055 Sphaerochaeta coccoides DSM 17374 10495615 YP_004411885.1 CDS Spico_1295 NC_015436.1 1512099 1512674 D COGs: COG2236 phosphoribosyltransferase; InterPro IPR000836; KEGG: sta:STHERM_c19080 hypothetical protein; PFAM: Phosphoribosyltransferase; SPTR: uncharacterized protein; IMG reference gene:2503957605; PFAM: Phosphoribosyl transferase domain; phosphoribosyltransferase 1512099..1512674 Sphaerochaeta coccoides DSM 17374 10495616 YP_004411886.1 CDS Spico_1296 NC_015436.1 1512671 1513939 D COGs: COG0104 Adenylosuccinate synthase; HAMAP: Adenylosuccinate synthetase; InterPro IPR001114; KEGG: dly:Dehly_0529 adenylosuccinate synthetase; PFAM: Adenylosuccinate synthetase; PRIAM: Adenylosuccinate synthase; SMART: Adenylosuccinate synthetase; SPTR: Adenylosuccinate synthetase; TIGRFAM: Adenylosuccinate synthetase; IMG reference gene:2503957606; PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase; adenylosuccinate synthetase 1512671..1513939 Sphaerochaeta coccoides DSM 17374 10495617 YP_004411887.1 CDS Spico_1297 NC_015436.1 1514265 1515356 D COGs: COG0687 Spermidine/putrescine-binding periplasmic protein; InterPro IPR006059; KEGG: tpp:TPASS_0655 spermidine/putrescine ABC transporter, periplasmic binding protein; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Spermidine/putrescine ABC transporter, periplasmic binding protein; IMG reference gene:2503957607; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein 1514265..1515356 Sphaerochaeta coccoides DSM 17374 10495618 YP_004411888.1 CDS Spico_1298 NC_015436.1 1515635 1518001 D COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR000408; KEGG: mxa:MXAN_0889 RCC1 repeat-containing protein; PFAM: Regulator of chromosome condensation, RCC1; Listeria/Bacterioides repeat; SPTR: Alpha-tubulin suppressor and related RCC1 domain-containing protein-like protein; IMG reference gene:2503957608; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 1515635..1518001 Sphaerochaeta coccoides DSM 17374 10495619 YP_004411889.1 CDS Spico_1299 NC_015436.1 1518187 1519587 D COGs: COG0015 Adenylosuccinate lyase; InterPro IPR004769:IPR022761:IPR019468; KEGG: cpy:Cphy_3043 adenylosuccinate lyase; PFAM: Lyase 1, N-terminal; Adenylosuccinate lyase C-terminal metazoa/fungi; SPTR: uncharacterized protein; TIGRFAM: Adenylosuccinate lyase; IMG reference gene:2503957609; PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase; adenylosuccinate lyase 1518187..1519587 Sphaerochaeta coccoides DSM 17374 10495620 YP_004411890.1 CDS Spico_1300 NC_015436.1 1519653 1520348 R InterPro IPR015414; KEGG: neu:NE1198 hypothetical protein; PFAM: SNARE associated Golgi protein; SPTR: uncharacterized protein; IMG reference gene:2503957610; PFAM: SNARE associated Golgi protein; hypothetical protein complement(1519653..1520348) Sphaerochaeta coccoides DSM 17374 10495621 YP_004411891.1 CDS Spico_1301 NC_015436.1 1520352 1521626 R COGs: COG2872 metal-dependent hydrolase related to alanyl-tRNA synthetase HxxxH domain; InterPro IPR012947:IPR018164; KEGG: ssm:Spirs_0879 alanyl-tRNA synthetase, class IIc; PFAM: Alanyl-tRNA synthetase, class IIc, N-terminal; Threonyl/alanyl tRNA synthetase, SAD; SMART: Threonyl/alanyl tRNA synthetase, SAD; SPTR: Threonyl/alanyl tRNA synthetase SAD; IMG reference gene:2503957611; PFAM: Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); alanyl-tRNA synthetase complement(1520352..1521626) Sphaerochaeta coccoides DSM 17374 10495622 YP_004411892.1 CDS Spico_1302 NC_015436.1 1521821 1522414 D KEGG: ssm:Spirs_0875 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957612; hypothetical protein 1521821..1522414 Sphaerochaeta coccoides DSM 17374 10495623 YP_004411893.1 CDS Spico_1303 NC_015436.1 1522454 1523143 R KEGG: dac:Daci_0587 cytochrome c biogenesis protein transmembrane region; SPTR: Cytochrome c biogenesis protein transmembrane region; IMG reference gene:2503957613; hypothetical protein complement(1522454..1523143) Sphaerochaeta coccoides DSM 17374 10495624 YP_004411894.1 CDS Spico_1304 NC_015436.1 1523336 1523890 R KEGG: gpb:HDN1F_10950 hypothetical protein; SPTR: Diheme Cytochrome c-type; IMG reference gene:2503957615; hypothetical protein complement(1523336..1523890) Sphaerochaeta coccoides DSM 17374 10495626 YP_004411895.1 CDS Spico_1305 NC_015436.1 1523967 1525217 R KEGG: osa:4345910 hypothetical protein; SPTR: Whole genome shotgun sequence assembly, scaffold_63; IMG reference gene:2503957616; hypothetical protein complement(1523967..1525217) Sphaerochaeta coccoides DSM 17374 10495627 YP_004411896.1 CDS Spico_1306 NC_015436.1 1525279 1526055 R COGs: COG2968 conserved hypothetical protein; InterPro IPR007497; KEGG: nha:Nham_3577 hypothetical protein; PFAM: Protein of unknown function DUF541; SPTR: uncharacterized protein; IMG reference gene:2503957617; PFAM: Protein of unknown function (DUF541); hypothetical protein complement(1525279..1526055) Sphaerochaeta coccoides DSM 17374 10495628 YP_004411897.1 CDS Spico_1307 NC_015436.1 1526105 1526719 R InterPro IPR000086; KEGG: ssm:Spirs_0637 NUDIX hydrolase; PFAM: NUDIX hydrolase domain; SPTR: MutT/nudix family protein; IMG reference gene:2503957618; PFAM: NUDIX domain; NUDIX hydrolase complement(1526105..1526719) Sphaerochaeta coccoides DSM 17374 10495629 YP_004411898.1 CDS Spico_1308 NC_015436.1 1526703 1527635 R COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR019591; KEGG: ssm:Spirs_0254 ATPase-like, ParA/MinD; PFAM: ATPase-like, ParA/MinD; SPTR: Iron-sulfur cluster assembly/repair protein; IMG reference gene:2503957619; PFAM: ParA/MinD ATPase like; Anion-transporting ATPase; chromosome partitioning protein ParA complement(1526703..1527635) Sphaerochaeta coccoides DSM 17374 10495630 YP_004411899.1 CDS Spico_1309 NC_015436.1 1527865 1528125 D KEGG: rop:ROP_14030 serine/threonine protein kinase; SPTR: serine/threonine protein kinase; IMG reference gene:2503957620; hypothetical protein 1527865..1528125 Sphaerochaeta coccoides DSM 17374 10495631 YP_004411900.1 CDS Spico_1310 NC_015436.1 1528150 1530330 D COGs: COG5016 Pyruvate/oxaloacetate carboxyltransferase; InterPro IPR000891:IPR000089; KEGG: ssm:Spirs_4017 biotin/lipoyl attachment domain-containing protein; PFAM: Biotin/lipoyl attachment; Pyruvate carboxyltransferase; PRIAM: Pyruvate carboxylase; SPTR: Pyruvate carboxylase, beta chain; IMG reference gene:2503957621; PFAM: HMGL-like; Biotin-requiring enzyme; Conserved carboxylase domain; pyruvate carboxylase 1528150..1530330 Sphaerochaeta coccoides DSM 17374 10495632 YP_004411901.1 CDS Spico_1311 NC_015436.1 1530650 1531135 D COGs: COG2131 Deoxycytidylate deaminase; InterPro IPR002125; KEGG: clo:HMPREF0868_0032 cytidine and deoxycytidylate deaminase zinc-binding region; PFAM: CMP/dCMP deaminase, zinc-binding; PRIAM: dCMP deaminase; SPTR: dCMP deaminase; IMG reference gene:2503957622; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; dCMP deaminase 1530650..1531135 Sphaerochaeta coccoides DSM 17374 10495633 YP_004411902.1 CDS Spico_1312 NC_015436.1 1531184 1531423 R KEGG: seu:SEQ_1013 signal peptidase I; SPTR: signal peptidase I; IMG reference gene:2503957623; hypothetical protein complement(1531184..1531423) Sphaerochaeta coccoides DSM 17374 10495634 YP_004411903.1 CDS Spico_1313 NC_015436.1 1531597 1532058 D COGs: COG1321 Mn-dependent transcriptional regulator protein; InterPro IPR022689:IPR022687:IPR001367; KEGG: dhd:Dhaf_1581 iron (metal) dependent repressor, DtxR family; PFAM: Iron dependent repressor, N-terminal; Iron dependent repressor; SMART: Iron dependent repressor, diptheria toxin type; SPTR: Iron (Metal) dependent repressor, DtxR family; IMG reference gene:2503957624; PFAM: Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain; DtxR family iron (metal) dependent repressor 1531597..1532058 Sphaerochaeta coccoides DSM 17374 10495635 YP_004411904.1 CDS Spico_1314 NC_015436.1 1532071 1533030 D COGs: COG1893 Ketopantoate reductase; InterPro IPR003710:IPR013332:IPR013752; KEGG: fsu:Fisuc_0919 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, N-terminal; Ketopantoate reductase ApbA/PanE, C-terminal; PRIAM: 2-dehydropantoate 2-reductase; SPTR: 2-dehydropantoate 2-reductase; TIGRFAM: Ketopantoate reductase ApbA/PanE; IMG reference gene:2503957625; PFAM: Ketopantoate reductase PanE/ApbA; Ketopantoate reductase PanE/ApbA C terminal; TIGRFAM: 2-dehydropantoate 2-reductase; 2-dehydropantoate 2-reductase 1532071..1533030 Sphaerochaeta coccoides DSM 17374 10495636 YP_004411905.1 CDS Spico_1315 NC_015436.1 1533075 1533971 R COGs: COG0349 Ribonuclease D; InterPro IPR002562; KEGG: ssm:Spirs_1372 3'-5' exonuclease; PFAM: 3'-5' exonuclease; SMART: 3'-5' exonuclease; SPTR: 3'-5' exonuclease; IMG reference gene:2503957626; PFAM: 3'-5' exonuclease; HRDC domain; 3'-5' exonuclease complement(1533075..1533971) Sphaerochaeta coccoides DSM 17374 10495637 YP_004411906.1 CDS Spico_1316 NC_015436.1 1534058 1535920 R COGs: COG1274 Phosphoenolpyruvate carboxykinase (GTP); HAMAP: Phosphoenolpyruvate carboxykinase, GTP-utilising; InterPro IPR008209; KEGG: tpp:TPASS_0122 phosphoenolpyruvate carboxykinase; PFAM: Phosphoenolpyruvate carboxykinase, GTP-utilising; PRIAM: Phosphoenolpyruvate carboxykinase (GTP); SPTR: Phosphoenolpyruvate carboxykinase [GTP]; IMG reference gene:2503957627; PFAM: Phosphoenolpyruvate carboxykinase; phosphoenolpyruvate carboxykinase complement(1534058..1535920) Sphaerochaeta coccoides DSM 17374 10495638 YP_004411907.1 CDS Spico_1317 NC_015436.1 1536052 1536612 R COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: cce:Ccel_1678 transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; SMART: Cyclic nucleotide-binding domain; SPTR: Cyclic nucleotide-binding:Bacterial regulatory protein, Crp; IMG reference gene:2503957628; PFAM: Cyclic nucleotide-binding domain; Crp/Fnr family transcriptional regulator complement(1536052..1536612) Sphaerochaeta coccoides DSM 17374 10495639 YP_004411908.1 CDS Spico_1318 NC_015436.1 1536863 1539157 D COGs: COG0826 Collagenase and related protease; InterPro IPR001539; KEGG: sta:STHERM_c21690 hypothetical protein; PFAM: Peptidase U32; SPTR: uncharacterized protein; IMG reference gene:2503957629; PFAM: Collagenase; Peptidase U32; peptidase U32 1536863..1539157 Sphaerochaeta coccoides DSM 17374 10495640 YP_004411909.1 CDS Spico_1319 NC_015436.1 1539269 1540294 R COGs: COG0136 Aspartate-semialdehyde dehydrogenase; InterPro IPR000534:IPR005676:IPR012280; KEGG: ssm:Spirs_4027 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, NAD-binding; Semialdehyde dehydrogenase, dimerisation domain; PRIAM: Aspartate-semialdehyde dehydrogenase; SMART: Semialdehyde dehydrogenase, NAD-binding; SPTR: Aspartate-semialdehyde dehydrogenase; TIGRFAM: Aspartate-semialdehyde dehydrogenase, peptidoglycan lacking; IMG reference gene:2503957630; PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms); aspartate-semialdehyde dehydrogenase complement(1539269..1540294) Sphaerochaeta coccoides DSM 17374 10495641 YP_004411910.1 CDS Spico_1321 NC_015436.1 1540671 1541807 R KEGG: blo:BL0787 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957632; PFAM: Protein of unknown function (DUF2974); hypothetical protein complement(1540671..1541807) Sphaerochaeta coccoides DSM 17374 10495643 YP_004411911.1 CDS Spico_1322 NC_015436.1 1542418 1544223 D COGs: COG5421 Transposase; InterPro IPR002559; KEGG: cob:COB47_1677 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; IMG reference gene:2503957634; PFAM: Transposase DDE domain; transposase IS4 family protein 1542418..1544223 Sphaerochaeta coccoides DSM 17374 10495645 YP_004411912.1 CDS Spico_1324 NC_015436.1 1544856 1546418 R COGs: COG0519 GMP synthase PP-ATPase domain/subunit; HAMAP: GMP synthase; InterProIPR004739:IPR001674:IPR000991:IPR004506:IPR 022955; KEGG: sat:SYN_01626 GMP synthase; PFAM: GMP synthase, C-terminal; Glutamine amidotransferase class-I, C-terminal; tRNA-specific 2-thiouridylase; PRIAM: GMP synthase (glutamine-hydrolyzing); SPTR: GMP synthase (Glutamine-hydrolyzing); TIGRFAM: GMP synthase, C-terminal; GMP synthase, N-terminal; IMG reference gene:2503957636; PFAM: Glutamine amidotransferase class-I; GMP synthase C terminal domain; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit; GMP synthase complement(1544856..1546418) Sphaerochaeta coccoides DSM 17374 10495647 YP_004411913.1 CDS Spico_1325 NC_015436.1 1546543 1547121 R COGs: COG4720 membrane protein; InterPro IPR009825; KEGG: tko:TK2102 hypothetical protein; PFAM: Protein of unknown function DUF1393; SPTR: Hypothetical membrane protein, conserved, DUF1393 family; IMG reference gene:2503957637; PFAM: Protein of unknown function (DUF1393); hypothetical protein complement(1546543..1547121) Sphaerochaeta coccoides DSM 17374 10495648 YP_004411914.1 CDS Spico_1326 NC_015436.1 1547203 1547979 R COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339; KEGG: sti:Sthe_3088 cobalt transport protein; PFAM: Cobalt transport protein; SPTR: Cobalt transport protein; IMG reference gene:2503957638; PFAM: Cobalt transport protein; cobalt transport protein complement(1547203..1547979) Sphaerochaeta coccoides DSM 17374 10495649 YP_004411915.1 CDS Spico_1327 NC_015436.1 1547976 1549508 R COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003593:IPR003439; KEGG: bad:BAD_0600 ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: uncharacterized protein; IMG reference gene:2503957639; PFAM: ABC transporter; ABC transporter complement(1547976..1549508) Sphaerochaeta coccoides DSM 17374 10495650 YP_004411916.1 CDS Spico_1328 NC_015436.1 1549519 1550271 R COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: ssm:Spirs_3805 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: 1-acyl-sn-glycerol-3-phosphate acyltransferase; IMG reference gene:2503957640; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; phospholipid/glycerol acyltransferase complement(1549519..1550271) Sphaerochaeta coccoides DSM 17374 10495651 YP_004411917.1 CDS Spico_1329 NC_015436.1 1550291 1552006 R COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR001140:IPR003439; KEGG: ssm:Spirs_4147 ABC transporter related protein; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, transmembrane region; IMG reference gene:2503957641; PFAM: ABC transporter transmembrane region; ABC transporter; xenobiotic-transporting ATPase complement(1550291..1552006) Sphaerochaeta coccoides DSM 17374 10495652 YP_004411918.1 CDS Spico_1330 NC_015436.1 1552006 1553895 R COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR014001:IPR001650:IPR011545; KEGG: ssm:Spirs_3800 DEAD/DEAH box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: ATP-dependent RNA helicase DbpA; IMG reference gene:2503957642; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; DEAD/DEAH box helicase complement(1552006..1553895) Sphaerochaeta coccoides DSM 17374 10495653 YP_004411919.1 CDS Spico_1331 NC_015436.1 1554029 1554847 R COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR001544; KEGG: ssm:Spirs_0479 aminotransferase class IV; PFAM: Aminotransferase, class IV; SPTR: Aminotransferase class IV; IMG reference gene:2503957643; PFAM: Aminotransferase class IV; class IV aminotransferase complement(1554029..1554847) Sphaerochaeta coccoides DSM 17374 10495654 YP_004411920.1 CDS Spico_1332 NC_015436.1 1554925 1557897 R COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR003593:IPR018541:IPR002543; KEGG: ssm:Spirs_3823 cell division protein FtsK/SpoIIIE; PFAM: Cell divisionFtsK/SpoIIIE; DNA translocase FtsK gamma; SMART: DNA translocase FtsK gamma; ATPase, AAA+ type, core; SPTR: Predicted DNA translocase FtsK; IMG reference gene:2503957644; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family; DNA translocase FtsK complement(1554925..1557897) Sphaerochaeta coccoides DSM 17374 10495655 YP_004411921.1 CDS Spico_1333 NC_015436.1 1558019 1558702 R COGs: COG0357 S-adenosylmethionine-dependent methyltransferase involved in cell division; HAMAP: rRNA small subunit methyltransferase G; InterPro IPR003682; KEGG: ssm:Spirs_3828 methyltransferase GidB; PFAM: rRNA small subunit methyltransferase G; SPTR: Ribosomal RNA small subunit methyltransferase G; TIGRFAM: rRNA small subunit methyltransferase G; IMG reference gene:2503957645; PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA (guanine(527)-N(7))-methyltransferase GidB; Ribosomal RNA small subunit methyltransferase G complement(1558019..1558702) Sphaerochaeta coccoides DSM 17374 10495656 YP_004411922.1 CDS Spico_1334 NC_015436.1 1558686 1560578 R COGs: COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division; HAMAP: Glucose-inhibited division protein A; InterPro IPR004416:IPR002218; KEGG: ssm:Spirs_3829 glucose inhibited division protein A; PFAM: Glucose-inhibited division protein A-related; SPTR: Glucose-inhibited division protein A; TIGRFAM: Glucose-inhibited division protein A; IMG reference gene:2503957646; PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A; tRNA uridine 5-carboxymethylaminomethyl modification protein MnmG complement(1558686..1560578) Sphaerochaeta coccoides DSM 17374 10495657 YP_004411923.1 CDS Spico_1335 NC_015436.1 1560657 1562120 R COGs: COG0486 GTPase; HAMAP: tRNA modification GTPase TrmE; InterPro IPR004520:IPR005225:IPR018948:IPR002917; KEGG: sta:STHERM_c02910 tRNA modification GTPase; PFAM: GTP-binding protein, HSR1-related; GTP-binding protein TrmE, N-terminal; SPTR: tRNA modification GTPase; TIGRFAM: tRNA modification GTPase TrmE; Small GTP-binding protein; IMG reference gene:2503957647; PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein domain; tRNA modification GTPase mnmE complement(1560657..1562120) Sphaerochaeta coccoides DSM 17374 10495658 YP_004411924.1 CDS Spico_1336 NC_015436.1 1562124 1563194 D COGs: COG2269 Truncated possibly inactive lysyl-tRNA synthetase (class II); InterPro IPR004364; KEGG: ssm:Spirs_3665 tRNA synthetase class II (D K and N); PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); PRIAM: Lysine--tRNA ligase; SPTR: Lysyl-tRNA synthetase; IMG reference gene:2503957648; PFAM: tRNA synthetases class II (D, K and N); lysine--tRNA ligase 1562124..1563194 Sphaerochaeta coccoides DSM 17374 10495659 YP_004411925.1 CDS Spico_1337 NC_015436.1 1563305 1563868 D COGs: COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); HAMAP: Translation elongation factor P; InterPro IPR015365:IPR011768:IPR013185:IPR001059; KEGG: ssm:Spirs_3666 translation elongation factor P; PFAM: Elongation factor P, C-terminal; Translation elongation factor, KOW-like; Translation elongation factor P/YeiP, central; SMART: Elongation factor P, C-terminal; SPTR: uncharacterized protein; TIGRFAM: Translation elongation factor P; IMG reference gene:2503957649; PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P; translation elongation factor P (EF-P) 1563305..1563868 Sphaerochaeta coccoides DSM 17374 10495660 YP_004411926.1 CDS Spico_1338 NC_015436.1 1563983 1565059 R COGs: COG1509 Lysine 2 3-aminomutase; InterPro IPR003739:IPR007197; KEGG: afw:Anae109_1316 lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM; PRIAM: Lysine 2,3-aminomutase; SPTR: Lysine 2,3-aminomutase YodO family protein; TIGRFAM: Conserved hyprothetical protein CHP00238, KamA; IMG reference gene:2503957650; PFAM: Radical SAM superfamily; TIGRFAM: KamA family protein; lysine 2,3-aminomutase YodO family protein complement(1563983..1565059) Sphaerochaeta coccoides DSM 17374 10495661 YP_004411927.1 CDS Spico_1339 NC_015436.1 1565189 1566511 D COGs: COG2211 Na+/melibiose symporter and related transporter; InterPro IPR011701; KEGG: ssm:Spirs_3673 major facilitator superfamily MFS_1; PFAM: Major facilitator superfamily MFS-1; SPTR: Transporter, ; IMG reference gene:2503957651; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein 1565189..1566511 Sphaerochaeta coccoides DSM 17374 10495662 YP_004411928.1 CDS Spico_1340 NC_015436.1 1566628 1567302 D InterPro IPR012506; KEGG: sgr:SGR_5669 hypothetical protein; PFAM: YhhN-like; SPTR: YhhN family protein; IMG reference gene:2503957652; PFAM: YhhN-like protein; hypothetical protein 1566628..1567302 Sphaerochaeta coccoides DSM 17374 10495663 YP_004411929.1 CDS Spico_1341 NC_015436.1 1567414 1571313 R InterPro IPR011493; KEGG: hwa:HQ1081A halomucin; SPTR: Halomucin; IMG reference gene:2503957653; hypothetical protein complement(1567414..1571313) Sphaerochaeta coccoides DSM 17374 10495664 YP_004411930.1 CDS Spico_1342 NC_015436.1 1571776 1572873 R KEGG: pfa:PF10_0351 probable protein; SPTR: Probable protein; IMG reference gene:2503957654; hypothetical protein complement(1571776..1572873) Sphaerochaeta coccoides DSM 17374 10495665 YP_004411931.1 CDS Spico_1343 NC_015436.1 1572922 1573530 R COGs: COG0237 Dephospho-CoA kinase; HAMAP: Dephospho-CoA kinase; InterPro IPR001977; KEGG: ssm:Spirs_3675 dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; SPTR: Dephospho-CoA kinase; TIGRFAM: Dephospho-CoA kinase; IMG reference gene:2503957655; PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; dephospho-CoA kinase complement(1572922..1573530) Sphaerochaeta coccoides DSM 17374 10495666 YP_004411932.1 CDS Spico_1344 NC_015436.1 1573530 1576370 R COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterProIPR002421:IPR008918:IPR002562:IPR001098:IPR 018320:IPR020046:IPR020047; KEGG: ssm:Spirs_3676 DNA polymerase I; PFAM: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, alpha-helical arch, N-terminal; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; PRIAM: DNA-directed DNA polymerase; SMART: 5'-3' exonuclease, N-terminal; Helix-hairpin-helix motif, class 2; 3'-5' exonuclease; DNA-directed DNA polymerase, family A, palm domain; SPTR: DNA polymerase I; TIGRFAM: DNA polymerase 1; IMG reference gene:2503957656; PFAM: 5'-3' exonuclease, C-terminal SAM fold; 3'-5' exonuclease; 5'-3' exonuclease, N-terminal resolvase-like domain; DNA polymerase A; TIGRFAM: DNA polymerase I; DNA polymerase I complement(1573530..1576370) Sphaerochaeta coccoides DSM 17374 10495667 YP_004411933.1 CDS Spico_1345 NC_015436.1 1576391 1577170 R COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; InterPro IPR001279; KEGG: ssm:Spirs_3682 beta-lactamase domain protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; SPTR: uncharacterized protein; IMG reference gene:2503957657; PFAM: Metallo-beta-lactamase superfamily; beta-lactamase domain-containing protein complement(1576391..1577170) Sphaerochaeta coccoides DSM 17374 10495668 YP_004411934.1 CDS Spico_1346 NC_015436.1 1577167 1577517 R KEGG: ani:AN1767.2 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957658; hypothetical protein complement(1577167..1577517) Sphaerochaeta coccoides DSM 17374 10495669 YP_004411935.1 CDS Spico_1347 NC_015436.1 1577727 1578329 R KEGG: gem:GM21_0672 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; IMG reference gene:2503957659; hypothetical protein complement(1577727..1578329) Sphaerochaeta coccoides DSM 17374 10495670 YP_004411936.1 CDS Spico_1348 NC_015436.1 1578558 1579193 R KEGG: pic:PICST_57741 hypothetical protein; SPTR: Probable outer membrane porin; IMG reference gene:2503957660; hypothetical protein complement(1578558..1579193) Sphaerochaeta coccoides DSM 17374 10495671 YP_004411937.1 CDS Spico_1349 NC_015436.1 1579334 1581247 R COGs: COG0171 NAD synthase; InterPro IPR003694:IPR003010:IPR022310; KEGG: ols:Olsu_0182 NAD+ synthetase; PFAM: NAD/GMP synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PRIAM: NAD(+) synthase (glutamine-hydrolyzing); SPTR: uncharacterized protein; TIGRFAM: NAD synthase; IMG reference gene:2503957661; PFAM: NAD synthase; Carbon-nitrogen hydrolase; TIGRFAM: NAD+ synthetase; NAD+ synthetase complement(1579334..1581247) Sphaerochaeta coccoides DSM 17374 10495672 YP_004411938.1 CDS Spico_1350 NC_015436.1 1581244 1582422 R COGs: COG2265 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase; InterPro IPR010280; KEGG: aca:ACP_2578 23S rRNA (uracil-5-)-methyltransferase; PFAM: (Uracil-5)-methyltransferase; SPTR: tRNA (Uracil-5-)-methyltransferase; IMG reference gene:2503957662; PFAM: tRNA (Uracil-5-)-methyltransferase; Met-10+ like-protein; (uracil-5)-methyltransferase complement(1581244..1582422) Sphaerochaeta coccoides DSM 17374 10495673 YP_004411939.1 CDS Spico_1351 NC_015436.1 1582419 1584194 R COGs: COG1164 Oligoendopeptidase F; InterPro IPR013647:IPR001567; KEGG: tde:TDE2001 oligoendopeptidase F, PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F; Peptidase M3B, oligopeptidase F, N-terminal; SPTR: Oligoendopeptidase F, ; IMG reference gene:2503957663; PFAM: Oligopeptidase F; Peptidase M3; TIGRFAM: oligoendopeptidase, pepF/M3 family; peptidase M3A and M3B thimet/oligopeptidase F complement(1582419..1584194) Sphaerochaeta coccoides DSM 17374 10495674 YP_004411940.1 CDS Spico_1352 NC_015436.1 1584281 1585654 R COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR003593:IPR002078:IPR002197; KEGG: ssm:Spirs_0494 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver domain; ATPase, AAA+ type, core; SPTR: Two component, sigma54 specific, transcriptional regulator, Fis family; IMG reference gene:2503957664; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; Fis family transcriptional regulator complement(1584281..1585654) Sphaerochaeta coccoides DSM 17374 10495675 YP_004411941.1 CDS Spico_1353 NC_015436.1 1585651 1586985 R COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: ssm:Spirs_0495 integral membrane sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Sensor histidine kinase; IMG reference gene:2503957665; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase complement(1585651..1586985) Sphaerochaeta coccoides DSM 17374 10495676 YP_004411942.1 CDS Spico_1354 NC_015436.1 1587150 1588331 R COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: sta:STHERM_c10100 hypothetical protein; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: uncharacterized protein; IMG reference gene:2503957666; PFAM: Predicted permease; hypothetical protein complement(1587150..1588331) Sphaerochaeta coccoides DSM 17374 10495677 YP_004411943.1 CDS Spico_1355 NC_015436.1 1588321 1589007 R COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: cpc:Cpar_0807 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; IMG reference gene:2503957667; PFAM: ABC transporter; phosphonate-transporting ATPase complement(1588321..1589007) Sphaerochaeta coccoides DSM 17374 10495678 YP_004411944.1 CDS Spico_1356 NC_015436.1 1589032 1590174 R COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: tde:TDE2284 RND family efflux transporter MFP subunit; PFAM: Secretion protein HlyD; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; IMG reference gene:2503957668; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter MFP subunit complement(1589032..1590174) Sphaerochaeta coccoides DSM 17374 10495679 YP_004411945.1 CDS Spico_1357 NC_015436.1 1590201 1591658 R KEGG: tgu:100231991 dual specificity phosphatase 27 (); SPTR: Outer membrane efflux protein; IMG reference gene:2503957669; hypothetical protein complement(1590201..1591658) Sphaerochaeta coccoides DSM 17374 10495680 YP_004411946.1 CDS Spico_1358 NC_015436.1 1592219 1593148 D COGs: COG1281 Disulfide bond chaperones of the HSP33 family; InterPro IPR000397; KEGG: ssm:Spirs_0341 HSP33 protein; PFAM: Heat shock protein Hsp33 protein; SPTR: Chaperonin HslO; IMG reference gene:2503957670; PFAM: Hsp33 protein; heat shock protein 33 1592219..1593148 Sphaerochaeta coccoides DSM 17374 10495681 YP_004411947.1 CDS Spico_1359 NC_015436.1 1593211 1595481 D COGs: COG0116 N6-adenine-specific DNA methylase; HAMAP: S-adenosyl-L-dependent RNA methyltransferase, bacteria; InterPro IPR004114:IPR000241:IPR017244; KEGG: alv:Alvin_2173 RNA methylase; PFAM: RNA methylase; THUMP; PRIAM: rRNA (guanine-N(2)-)-methyltransferase; SMART: THUMP; SPTR: Ribosomal RNA large subunit methyltransferase L; IMG reference gene:2503957671; PFAM: RNA methylase UPF0020; S-adenosylmethionine-dependent methyltransferase; THUMP domain; Ribosomal RNA large subunit methyltransferase L 1593211..1595481 Sphaerochaeta coccoides DSM 17374 10495682 YP_004411948.1 CDS Spico_1360 NC_015436.1 1595593 1596030 D COGs: COG1970 Large-conductance mechanosensitive channel; HAMAP: Large-conductance mechanosensitive channel; InterPro IPR001185; KEGG: cco:CCC13826_1549 large-conductance mechanosensitive channel; PFAM: Large-conductance mechanosensitive channel; SPTR: Large-conductance mechanosensitive channel; TIGRFAM: Large-conductance mechanosensitive channel; IMG reference gene:2503957672; PFAM: Large-conductance mechanosensitive channel, MscL; TIGRFAM: large conductance mechanosensitive channel protein; Large-conductance mechanosensitive channel 1595593..1596030 Sphaerochaeta coccoides DSM 17374 10495683 YP_004411949.1 CDS Spico_1361 NC_015436.1 1596157 1596918 R COGs: COG2184 Protein involved in cell division; InterPro IPR003812; KEGG: hmo:HM1_0604 cell filamentation protein fic, PFAM: Filamentation induced by cAMP/death on curing-related; SPTR: Cell filamentation protein fic, ; IMG reference gene:2503957673; PFAM: Fic/DOC family; Fic family protein complement(1596157..1596918) Sphaerochaeta coccoides DSM 17374 10495684 YP_004411950.1 CDS Spico_1362 NC_015436.1 1597057 1598274 R KEGG: alv:Alvin_0840 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957674; hypothetical protein complement(1597057..1598274) Sphaerochaeta coccoides DSM 17374 10495685 YP_004411951.1 CDS Spico_1363 NC_015436.1 1598469 1599638 R COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: ssm:Spirs_1400 ROK family protein; PFAM: ROK; SPTR: transcriptional regulator; IMG reference gene:2503957675; PFAM: ROK family; ROK family protein complement(1598469..1599638) Sphaerochaeta coccoides DSM 17374 10495686 YP_004411952.1 CDS Spico_1365 NC_015436.1 1599931 1601211 R COGs: COG3681 conserved hypothetical protein; HAMAP: Uncharacterised protein family UPF0597; InterPro IPR021144; KEGG: bpo:BP951000_1867 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957677; PFAM: Serine dehydratase alpha chain; hypothetical protein complement(1599931..1601211) Sphaerochaeta coccoides DSM 17374 10495688 YP_004411953.1 CDS Spico_1366 NC_015436.1 1601222 1602850 R KEGG: osa:4351396 hypothetical protein; SPTR: M18 family aminopeptidase; IMG reference gene:2503957678; hypothetical protein complement(1601222..1602850) Sphaerochaeta coccoides DSM 17374 10495689 YP_004411954.1 CDS Spico_1367 NC_015436.1 1602894 1603742 R COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: csh:Closa_1292 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: uncharacterized protein; IMG reference gene:2503957679; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein complement(1602894..1603742) Sphaerochaeta coccoides DSM 17374 10495690 YP_004411955.1 CDS Spico_1368 NC_015436.1 1603744 1604634 R COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: csh:Closa_1291 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Transport protein; IMG reference gene:2503957680; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein complement(1603744..1604634) Sphaerochaeta coccoides DSM 17374 10495691 YP_004411956.1 CDS Spico_1369 NC_015436.1 1604701 1606053 R COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: csh:Closa_1290 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: uncharacterized protein; IMG reference gene:2503957681; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein complement(1604701..1606053) Sphaerochaeta coccoides DSM 17374 10495692 YP_004411957.1 CDS Spico_1370 NC_015436.1 1606050 1607003 R KEGG: csh:Closa_1289 uroporphyrinogen-III decarboxylase-like protein; SPTR: uncharacterized protein; IMG reference gene:2503957682; PFAM: Uroporphyrinogen decarboxylase (URO-D); hypothetical protein complement(1606050..1607003) Sphaerochaeta coccoides DSM 17374 10495693 YP_004411958.1 CDS Spico_1371 NC_015436.1 1607188 1607967 D COGs: COG2964 conserved hypothetical protein; InterPro IPR013559; KEGG: hiq:CGSHiGG_06150 hypothetical protein; PFAM: YheO-like; SPTR: uncharacterized protein; IMG reference gene:2503957683; PFAM: YheO-like PAS domain; hypothetical protein 1607188..1607967 Sphaerochaeta coccoides DSM 17374 10495694 YP_004411959.1 CDS Spico_1372 NC_015436.1 1607962 1608723 R COGs: COG4821 Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain; KEGG: tpe:Tpen_1090 hypothetical protein; SPTR: Phosphoheptose isomerase, ; IMG reference gene:2503957684; hypothetical protein complement(1607962..1608723) Sphaerochaeta coccoides DSM 17374 10495695 YP_004411960.1 CDS Spico_1373 NC_015436.1 1608890 1610245 R KEGG: hmg:100208216 similar to Collagen alpha-5(VI) chain; SPTR: Hemagglutinin-neuraminidase; IMG reference gene:2503957685; hypothetical protein complement(1608890..1610245) Sphaerochaeta coccoides DSM 17374 10495696 YP_004411961.1 CDS Spico_1374 NC_015436.1 1610330 1610692 R KEGG: aoe:Clos_2735 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957686; hypothetical protein complement(1610330..1610692) Sphaerochaeta coccoides DSM 17374 10495697 YP_004411962.1 CDS Spico_1375 NC_015436.1 1610832 1611017 R KEGG: cbe:Cbei_1260 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957687; hypothetical protein complement(1610832..1611017) Sphaerochaeta coccoides DSM 17374 10495698 YP_004411963.1 CDS Spico_1376 NC_015436.1 1611095 1612087 R COGs: COG0180 Tryptophanyl-tRNA synthetase; InterPro IPR002306:IPR002305; KEGG: esi:Exig_2059 tryptophanyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib; PRIAM: Tryptophan--tRNA ligase; SPTR: Tryptophan--tRNA ligase; TIGRFAM: Tryptophanyl-tRNA synthetase, class Ib; IMG reference gene:2503957688; PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase; tryptophanyl-tRNA synthetase complement(1611095..1612087) Sphaerochaeta coccoides DSM 17374 10495699 YP_004411964.1 CDS Spico_1377 NC_015436.1 1612653 1615298 D COGs: COG0474 Cation transport ATPase; InterProIPR004014:IPR006415:IPR001757:IPR008250:IPR 005834:IPR006068; KEGG: acl:ACL_1281 magnesium transporting ATPase, P-type; PFAM: ATPase, P-type, ATPase-associated domain; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal; PRIAM: Magnesium-importing ATPase; SMART: ATPase, P-type cation-transporter, N-terminal; SPTR: Magnesium transporting ATPase, P-type; TIGRFAM: ATPase, P-type, magnesium-translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; IMG reference gene:2503957689; PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; magnesium-translocating P-type ATPase; magnesium-translocating P-type ATPase 1612653..1615298 Sphaerochaeta coccoides DSM 17374 10495700 YP_004411965.1 CDS Spico_1378 NC_015436.1 1615386 1616552 R COGs: COG1912 conserved hypothetical protein; KEGG: ssm:Spirs_0807 peptidoglycan-binding lysin domain protein; SPTR: uncharacterized protein; IMG reference gene:2503957690; PFAM: S-adenosyl-l-methionine hydroxide adenosyltransferase; Tyrosine phosphatase; peptidoglycan-binding lysin domain-containing protein complement(1615386..1616552) Sphaerochaeta coccoides DSM 17374 10495701 YP_004411966.1 CDS Spico_1380 NC_015436.1 1616981 1618150 D COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: cth:Cthe_2799 cystathionine gamma-synthase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; PRIAM: Cystathionine gamma-lyase; SPTR: Cystathionine gamma-synthase; IMG reference gene:2503957692; PFAM: Cys/Met metabolism PLP-dependent enzyme; cystathionine gamma-lyase 1616981..1618150 Sphaerochaeta coccoides DSM 17374 10495703 YP_004411967.1 CDS Spico_1381 NC_015436.1 1618256 1619866 R COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR001789:IPR018060:IPR000005; KEGG: cpy:Cphy_0293 two component AraC family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; HTH transcriptional regulator, AraC; SMART: Signal transduction response regulator, receiver domain; Helix-turn-helix, AraC type, DNA binding domain; SPTR: Two component transcriptional regulator, AraC family; IMG reference gene:2503957693; PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator complement(1618256..1619866) Sphaerochaeta coccoides DSM 17374 10495704 YP_004411968.1 CDS Spico_1382 NC_015436.1 1619859 1620773 R COGs: COG2972 signal transduction protein with a C-terminal ATPase domain; InterPro IPR003660:IPR003594:IPR010559; KEGG: csh:Closa_1925 integral membrane sensor signal transduction histidine kinase; PFAM: Signal transduction histidine kinase, internal region; HAMP linker domain; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; HAMP linker domain; SPTR: Sensor histidine kinase; IMG reference gene:2503957694; PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; integral membrane sensor signal transduction histidine kinase complement(1619859..1620773) Sphaerochaeta coccoides DSM 17374 10495705 YP_004411969.1 CDS Spico_1383 NC_015436.1 1620874 1622145 D COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: cpy:Cphy_0291 extracellular solute-binding protein; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein family 1; IMG reference gene:2503957695; PFAM: Bacterial extracellular solute-binding protein; carbohydrate ABC transporter substrate-binding protein 1620874..1622145 Sphaerochaeta coccoides DSM 17374 10495706 YP_004411970.1 CDS Spico_1384 NC_015436.1 1622210 1623121 D COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: cpy:Cphy_0290 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Transmembrane permease MsmF; IMG reference gene:2503957696; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 1 1622210..1623121 Sphaerochaeta coccoides DSM 17374 10495707 YP_004411971.1 CDS Spico_1385 NC_015436.1 1623132 1623962 D COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: cpy:Cphy_0289 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503957697; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 2 1623132..1623962 Sphaerochaeta coccoides DSM 17374 10495708 YP_004411972.1 CDS Spico_1386 NC_015436.1 1624142 1626136 D InterPro IPR012480; KEGG: cpy:Cphy_3022 heparinase II/III family protein; PFAM: Heparinase II/III-like; SPTR: Heparinase II/III family protein; IMG reference gene:2503957698; PFAM: Heparinase II/III-like protein; heparinase II/III family protein 1624142..1626136 Sphaerochaeta coccoides DSM 17374 10495709 YP_004411973.1 CDS Spico_1387 NC_015436.1 1626410 1627174 D COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: cce:Ccel_2618 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Short-chain dehydrogenase/reductase SDR; IMG reference gene:2503957699; PFAM: short chain dehydrogenase; 3-oxoacyl-ACP reductase 1626410..1627174 Sphaerochaeta coccoides DSM 17374 10495710 YP_004411974.1 CDS Spico_1388 NC_015436.1 1627523 1629649 D COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR011110; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; IMG reference gene:2503957700; PFAM: Regulator of chromosome condensation (RCC1) repeat; hypothetical protein 1627523..1629649 Sphaerochaeta coccoides DSM 17374 10495711 YP_004411975.1 CDS Spico_1389 NC_015436.1 1630057 1632375 D COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR011110; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; IMG reference gene:2503957701; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; hypothetical protein 1630057..1632375 Sphaerochaeta coccoides DSM 17374 10495712 YP_004411976.1 CDS Spico_1390 NC_015436.1 1632496 1633695 D COGs: COG3214 conserved hypothetical protein; InterPro IPR009351; KEGG: bbe:BBR47_29660 hypothetical protein; PFAM: Protein of unknown function DUF1006; SPTR: uncharacterized protein; IMG reference gene:2503957702; PFAM: Protein of unknown function (DUF1006); hypothetical protein 1632496..1633695 Sphaerochaeta coccoides DSM 17374 10495713 YP_004411977.1 CDS Spico_1391 NC_015436.1 1633717 1634577 R COGs: COG1912 conserved hypothetical protein; InterPro IPR002747; KEGG: sga:GALLO_1836 hypothetical protein; PFAM: Protein of unknown function DUF62; SPTR: Molybdate/tungstate binding protein; IMG reference gene:2503957703; PFAM: S-adenosyl-l-methionine hydroxide adenosyltransferase; hypothetical protein complement(1633717..1634577) Sphaerochaeta coccoides DSM 17374 10495714 YP_004411978.1 CDS Spico_1392 NC_015436.1 1634635 1635486 R COGs: COG1912 conserved hypothetical protein; InterPro IPR002747; KEGG: lbu:LBUL_1585 hypothetical protein; PFAM: Protein of unknown function DUF62; SPTR: Molybdate/tungstate binding protein; IMG reference gene:2503957704; PFAM: S-adenosyl-l-methionine hydroxide adenosyltransferase; hypothetical protein complement(1634635..1635486) Sphaerochaeta coccoides DSM 17374 10495715 YP_004411979.1 CDS Spico_1393 NC_015436.1 1635483 1636937 R COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR010964:IPR002933:IPR011650; KEGG: gtn:GTNG_2735 Xaa-His dipeptidase; PFAM: Peptidase M20; Peptidase M20, dimerisation; SPTR: M20 family peptidase PepV; TIGRFAM: Peptidase M20A, peptidase V-related; IMG reference gene:2503957705; PFAM: Peptidase M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: dipeptidase; dipeptidase complement(1635483..1636937) Sphaerochaeta coccoides DSM 17374 10495716 YP_004411980.1 CDS Spico_1394 NC_015436.1 1636937 1637791 R COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339; KEGG: ssm:Spirs_3591 cobalt transport protein; PFAM: Cobalt transport protein; SPTR: uncharacterized protein; IMG reference gene:2503957706; PFAM: Cobalt transport protein; cobalt transport protein complement(1636937..1637791) Sphaerochaeta coccoides DSM 17374 10495717 YP_004411981.1 CDS Spico_1395 NC_015436.1 1637788 1639503 R COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003593:IPR003439; KEGG: ssm:Spirs_3590 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter domain-containing protein; IMG reference gene:2503957707; PFAM: ABC transporter; ATP-binding cassette cobalt transporter; monosaccharide-transporting ATPase complement(1637788..1639503) Sphaerochaeta coccoides DSM 17374 10495718 YP_004411982.1 CDS Spico_1396 NC_015436.1 1639500 1640090 R InterPro IPR009825; KEGG: ssm:Spirs_3589 protein of unknown function DUF1393; PFAM: Protein of unknown function DUF1393; SPTR: Substrate-specific component MtsA of methionine-regulated ECF transporter; IMG reference gene:2503957708; PFAM: Protein of unknown function (DUF1393); hypothetical protein complement(1639500..1640090) Sphaerochaeta coccoides DSM 17374 10495719 YP_004411983.1 CDS Spico_1397 NC_015436.1 1640681 1642840 D COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR011110; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; IMG reference gene:2503957709; PFAM: Regulator of chromosome condensation (RCC1) repeat; hypothetical protein 1640681..1642840 Sphaerochaeta coccoides DSM 17374 10495720 YP_004411984.1 CDS Spico_1398 NC_015436.1 1642910 1644850 R COGs: COG4211 ABC-type glucose/galactose transport system permease component; InterPro IPR001851; KEGG: tde:TDE2215 galactoside ABC transporter, permease, PFAM: ABC transporter permease; SPTR: galactoside ABC transporter, permease; IMG reference gene:2503957710; PFAM: Branched-chain amino acid transport system / permease component; monosaccharide ABC transporter membrane protein, CUT2 family complement(1642910..1644850) Sphaerochaeta coccoides DSM 17374 10495721 YP_004411985.1 CDS Spico_1399 NC_015436.1 1644869 1646365 R COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: tde:TDE2216 galactoside ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Galactose/methyl galactoside import ATP-binding protein MglA; IMG reference gene:2503957711; PFAM: ABC transporter; monosaccharide ABC transporter ATP-binding protein, CUT2 family complement(1644869..1646365) Sphaerochaeta coccoides DSM 17374 10495722 YP_004411986.1 CDS Spico_1400 NC_015436.1 1646483 1647688 R COGs: COG1879 ABC-type sugar transport system periplasmic component; KEGG: tde:TDE2217 galactose/glucose-binding lipoprotein; SPTR: Galactose/glucose-binding lipoprotein; IMG reference gene:2503957712; monosaccharide ABC transporter substrate-binding protein, CUT2 family complement(1646483..1647688) Sphaerochaeta coccoides DSM 17374 10495723 YP_004411987.1 CDS Spico_1401 NC_015436.1 1648036 1649742 D COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR001789:IPR018060:IPR000005; KEGG: ccb:Clocel_3842 two component transcriptional regulator, AraC family; PFAM: Signal transduction response regulator, receiver domain; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; Signal transduction response regulator, receiver domain; SPTR: Two component transcriptional regulator, AraC family; IMG reference gene:2503957713; PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator 1648036..1649742 Sphaerochaeta coccoides DSM 17374 10495724 YP_004411988.1 CDS Spico_1402 NC_015436.1 1649735 1651513 D COGs: COG2972 signal transduction protein with a C-terminal ATPase domain; InterPro IPR003660:IPR003594:IPR004010:IPR010559; KEGG: ccb:Clocel_3841 multi-sensor signal transduction histidine kinase; PFAM: Signal transduction histidine kinase, internal region; HAMP linker domain; Cache; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; HAMP linker domain; SPTR: Multi-sensor signal transduction histidine kinase; IMG reference gene:2503957714; PFAM: Histidine kinase; HAMP domain; Cache domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; multi-sensor signal transduction histidine kinase 1649735..1651513 Sphaerochaeta coccoides DSM 17374 10495725 YP_004411989.1 CDS Spico_1403 NC_015436.1 1651510 1652541 D COGs: COG1879 ABC-type sugar transport system periplasmic component; KEGG: cpy:Cphy_2251 periplasmic binding protein/LacI transcriptional regulator; SPTR: uncharacterized protein; IMG reference gene:2503957715; hypothetical protein 1651510..1652541 Sphaerochaeta coccoides DSM 17374 10495726 YP_004411990.1 CDS Spico_1404 NC_015436.1 1652545 1653567 R COGs: COG1879 ABC-type sugar transport system periplasmic component; KEGG: bbe:BBR47_06800 D-galactose ABC transporter substrate binding protein precursor; SPTR: D-galactose ABC transporter substrate binding protein; IMG reference gene:2503957716; monosaccharide ABC transporter substrate-binding protein, CUT2 family complement(1652545..1653567) Sphaerochaeta coccoides DSM 17374 10495727 YP_004411991.1 CDS Spico_1405 NC_015436.1 1653945 1656488 D COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR011110:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Listeria/Bacterioides repeat; Two component regulator propeller; Regulator of chromosome condensation, RCC1; SPTR: Alpha-tubulin suppressor and related RCC1 domain-containing protein-like protein; IMG reference gene:2503957717; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; hypothetical protein 1653945..1656488 Sphaerochaeta coccoides DSM 17374 10495728 YP_004411992.1 CDS Spico_1406 NC_015436.1 1656799 1657428 R COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR010065:IPR000515; KEGG: dhd:Dhaf_1045 polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: uncharacterized protein; TIGRFAM: Amino acid ABC transporter, permease, 3-TM domain, His/Glu/Gln/Arg/opine family; IMG reference gene:2503957718; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family; amino acid ABC transporter permease complement(1656799..1657428) Sphaerochaeta coccoides DSM 17374 10495729 YP_004411993.1 CDS Spico_1407 NC_015436.1 1657425 1658090 R COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR010065:IPR000515; KEGG: dsy:DSY4276 hypothetical protein; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: uncharacterized protein; TIGRFAM: Amino acid ABC transporter, permease, 3-TM domain, His/Glu/Gln/Arg/opine family; IMG reference gene:2503957719; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family; amino acid ABC transporter permease complement(1657425..1658090) Sphaerochaeta coccoides DSM 17374 10495730 YP_004411994.1 CDS Spico_1408 NC_015436.1 1658093 1658902 R COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001638; KEGG: dhd:Dhaf_1043 extracellular solute-binding protein family 3; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; SPTR: uncharacterized protein; IMG reference gene:2503957720; PFAM: Bacterial extracellular solute-binding proteins, family 3; amino acid ABC transporter substrate-binding protein complement(1658093..1658902) Sphaerochaeta coccoides DSM 17374 10495731 YP_004411995.1 CDS Spico_1409 NC_015436.1 1659099 1659845 R COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: toc:Toce_1570 amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Amino acid ABC transporter ATP-binding protein, PAAT family; IMG reference gene:2503957721; PFAM: ABC transporter; amino acid ABC transporter ATP-binding protein complement(1659099..1659845) Sphaerochaeta coccoides DSM 17374 10495732 YP_004411996.1 CDS Spico_1410 NC_015436.1 1660489 1660965 D COGs: COG1854 LuxS protein involved in autoinducer AI2 synthesis; InterPro IPR003815; KEGG: bpb:bpr_I0033 S-ribosylhomocysteinase LuxS; PFAM: S-ribosylhomocysteinase (LuxS); PRIAM: S-ribosylhomocysteine lyase; SPTR: S-ribosylhomocysteinase LuxS; IMG reference gene:2503957722; PFAM: S-Ribosylhomocysteinase (LuxS); quorum-sensing autoinducer 2 (AI-2), LuxS 1660489..1660965 Sphaerochaeta coccoides DSM 17374 10495733 YP_004411997.1 CDS Spico_1411 NC_015436.1 1660985 1661665 D COGs: COG0775 Nucleoside phosphorylase; InterPro IPR010049:IPR000845; KEGG: ppy:PPE_03405 MTA/SAH nucleosidase (5'-methylthioadenosine nucleosidase); PFAM: Nucleoside phosphorylase domain; PRIAM: Adenosylhomocysteine nucleosidase; SPTR: MTA/SAH nucleosidase (5'-methylthioadenosine nucleosidase); TIGRFAM: MTA/SAH nucleosidase; IMG reference gene:2503957723; PFAM: Phosphorylase superfamily; TIGRFAM: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; MTA/SAH nucleosidase 1660985..1661665 Sphaerochaeta coccoides DSM 17374 10495734 YP_004411998.1 CDS Spico_1412 NC_015436.1 1661680 1661943 D KEGG: mxa:MXAN_2924 general secretion pathway protein E; IMG reference gene:2503957724; hypothetical protein 1661680..1661943 Sphaerochaeta coccoides DSM 17374 10495735 YP_004411999.1 CDS Spico_1413 NC_015436.1 1662000 1662923 D COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: cac:CA_C0427 glycerol-3-phosphate ABC-transporter, permease component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503957725; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 1662000..1662923 Sphaerochaeta coccoides DSM 17374 10495736 YP_004412000.1 CDS Spico_1414 NC_015436.1 1662920 1663771 D COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: cac:CA_C0428 sugar permease; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503957726; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 1662920..1663771 Sphaerochaeta coccoides DSM 17374 10495737 YP_004412001.1 CDS Spico_1415 NC_015436.1 1663795 1665180 D COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: apr:Apre_0061 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein family 1; IMG reference gene:2503957727; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein 1663795..1665180 Sphaerochaeta coccoides DSM 17374 10495738 YP_004412002.1 CDS Spico_1416 NC_015436.1 1665183 1666070 D COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: toc:Toce_0893 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel; IMG reference gene:2503957728; PFAM: Xylose isomerase-like TIM barrel; xylose isomerase domain-containing protein 1665183..1666070 Sphaerochaeta coccoides DSM 17374 10495739 YP_004412003.1 CDS Spico_1417 NC_015436.1 1666067 1666549 R COGs: COG0789 transcriptional regulator protein; InterPro IPR000551; KEGG: seq:SZO_16670 MerR family regulatory protein; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; SPTR: MerR family regulatory protein; IMG reference gene:2503957729; PFAM: MerR family regulatory protein; MerR family transcriptional regulator complement(1666067..1666549) Sphaerochaeta coccoides DSM 17374 10495740 YP_004412004.1 CDS Spico_1418 NC_015436.1 1666650 1667336 D COGs: COG2003 DNA repair protein; InterPro IPR001405; KEGG: ssm:Spirs_3489 DNA repair protein RadC; PFAM: Uncharacterised protein family UPF0758; SPTR: DNA repair protein; TIGRFAM: Uncharacterised protein family UPF0758; IMG reference gene:2503957730; PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc; DNA repair protein RadC 1666650..1667336 Sphaerochaeta coccoides DSM 17374 10495741 YP_004412005.1 CDS Spico_1419 NC_015436.1 1667306 1668364 R COGs: COG0053 Co/Zn/Cd cation transporter; InterPro IPR002524; KEGG: cbf:CLI_1359 cation efflux family protein; PFAM: Cation efflux protein; SPTR: Cation diffusion facilitator family transporter; TIGRFAM: Cation efflux protein; IMG reference gene:2503957731; PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; cation diffusion facilitator family transporter complement(1667306..1668364) Sphaerochaeta coccoides DSM 17374 10495742 YP_004412006.1 CDS Spico_1420 NC_015436.1 1668327 1668938 R COGs: COG0139 Phosphoribosyl-AMP cyclohydrolase; HAMAP: Phosphoribosyl-ATP pyrophosphohydrolase; Histidine biosynthesis bifunctional protein HisIE; InterPro IPR008179:IPR002496:IPR021130:IPR023019; KEGG: cpi:Cpin_1832 phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase-like; Phosphoribosyl-AMP cyclohydrolase; SPTR: Phosphoribosyl-ATP diphosphatase; TIGRFAM: Phosphoribosyl-ATP pyrophosphohydrolase; IMG reference gene:2503957732; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-AMP cyclohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-ATP pyrophosphatase complement(1668327..1668938) Sphaerochaeta coccoides DSM 17374 10495743 YP_004412007.1 CDS Spico_1421 NC_015436.1 1668950 1669741 R COGs: COG0107 Imidazoleglycerol-phosphate synthase; HAMAP: Histidine biosynthesis, HisF; InterPro IPR004651:IPR006062; KEGG: cpi:Cpin_1831 imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: Histidine biosynthesis; PRIAM:1-(5-phosphoribosyl)-5-((5-phosphoribosylamin o)methylideneamino)imidazole-4-carboxamideisomerase; SPTR: Imidazole glycerol phosphate synthase subunit hisF; TIGRFAM: Histidine biosynthesis, HisF; IMG reference gene:2503957733; PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; imidazole glycerol phosphate synthase subunit HisF complement(1668950..1669741) Sphaerochaeta coccoides DSM 17374 10495744 YP_004412008.1 CDS Spico_1422 NC_015436.1 1669743 1670492 R COGs: COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; HAMAP: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; InterPro IPR006062:IPR023016; KEGG: chu:CHU_1272 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; PFAM: Histidine biosynthesis; PRIAM:1-(5-phosphoribosyl)-5-((5-phosphoribosylamin o)methylideneamino)imidazole-4-carboxamideisomerase; SPTR:1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; IMG reference gene:2503957734; PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase complement(1669743..1670492) Sphaerochaeta coccoides DSM 17374 10495745 YP_004412009.1 CDS Spico_1423 NC_015436.1 1670483 1671094 R COGs: COG0118 Glutamine amidotransferase; HAMAP: Imidazole glycerol phosphate synthase, subunit H; InterPro IPR010139:IPR000991; KEGG: dfe:Dfer_4237 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: Glutamine amidotransferase class-I, C-terminal; SPTR: Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; TIGRFAM: Imidazole glycerol phosphate synthase, subunit H; IMG reference gene:2503957735; PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; imidazole glycerol phosphate synthase subunit HisH complement(1670483..1671094) Sphaerochaeta coccoides DSM 17374 10495746 YP_004412010.1 CDS Spico_1424 NC_015436.1 1671118 1672278 R COGs: COG0131 Imidazoleglycerol-phosphate dehydratase; HAMAP: Imidazoleglycerol-phosphate dehydratase; InterPro IPR006543:IPR006549:IPR000807; KEGG: chu:CHU_1270 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; PFAM: Imidazoleglycerol-phosphate dehydratase; PRIAM: Histidinol-phosphatase; SPTR: Bifunctional protein: histidinol-phosphatase; imidazoleglycerol-phosphate dehydratase; TIGRFAM: Histidinol-phosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; IMG reference gene:2503957736; PFAM: Imidazoleglycerol-phosphate dehydratase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; histidinol-phosphate phosphatase domain; histidinol-phosphatase; imidazoleglycerol-phosphate dehydratase complement(1671118..1672278) Sphaerochaeta coccoides DSM 17374 10495747 YP_004412011.1 CDS Spico_1425 NC_015436.1 1672278 1673435 R COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; HAMAP: Histidinol-phosphate aminotransferase; InterPro IPR005861:IPR004839; KEGG: pdi:BDI_0968 histidinol-phosphate aminotransferase; PFAM: Aminotransferase, class I/classII; PRIAM: Histidinol-phosphate transaminase; SPTR: Histidinol-phosphate aminotransferase; TIGRFAM: Histidinol-phosphate aminotransferase; IMG reference gene:2503957737; PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase complement(1672278..1673435) Sphaerochaeta coccoides DSM 17374 10495748 YP_004412012.1 CDS Spico_1426 NC_015436.1 1673432 1674787 R COGs: COG0141 Histidinol dehydrogenase; HAMAP: Histidinol dehydrogenase, prokaryotic-type; InterPro IPR012131; KEGG: pdi:BDI_0967 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase, prokaryotic-type; PRIAM: Histidinol dehydrogenase; SPTR: Histidinol dehydrogenase; TIGRFAM: Histidinol dehydrogenase, prokaryotic-type; IMG reference gene:2503957738; PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; histidinol dehydrogenase complement(1673432..1674787) Sphaerochaeta coccoides DSM 17374 10495749 YP_004412013.1 CDS Spico_1427 NC_015436.1 1674791 1675669 R COGs: COG0040 ATP phosphoribosyltransferase; HAMAP: Histidine biosynthesis HisG, ATP phosphoribosyltransferase, subgroup; InterPro IPR013820:IPR013115:IPR020621; KEGG: dfe:Dfer_1142 ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase, catalytic domain; Histidine biosynthesis HisG, C-terminal; PRIAM: ATP phosphoribosyltransferase; SPTR: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase, catalytic domain; Histidine biosynthesis HisG, C-terminal; IMG reference gene:2503957739; PFAM: HisG, C-terminal domain; ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase, C-terminal domain; ATP phosphoribosyltransferase; ATP phosphoribosyltransferase complement(1674791..1675669) Sphaerochaeta coccoides DSM 17374 10495750 YP_004412014.1 CDS Spico_1428 NC_015436.1 1675907 1676503 R KEGG: sti:Sthe_2657 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957740; hypothetical protein complement(1675907..1676503) Sphaerochaeta coccoides DSM 17374 10495751 YP_004412015.1 CDS Spico_1429 NC_015436.1 1676612 1677319 D COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR011951:IPR006439:IPR005834; KEGG: rcu:RCOM_2074390 5'-nucleotidase yjjG, PFAM: Haloacid dehalogenase-like hydrolase; PRIAM: 5'-nucleotidase; SPTR: 5'-nucleotidase yjjG, ; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB; HAD-superfamily hydrolase, subfamily IA, variant 1; IMG reference gene:2503957741; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; HAD superfamily (subfamily IA) hydrolase, TIGR02254; HAD-superfamily hydrolase 1676612..1677319 Sphaerochaeta coccoides DSM 17374 10495752 YP_004412016.1 CDS Spico_1430 NC_015436.1 1677329 1678114 R COGs: COG0545 FKBP-type peptidyl-prolyl cis-trans isomerase 1; InterPro IPR000774:IPR001179; KEGG: dol:Dole_1577 peptidylprolyl isomerase FKBP-type; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal; Peptidyl-prolyl cis-trans isomerase, FKBP-type; SPTR: Peptidyl-prolyl cis-trans isomerase; IMG reference gene:2503957742; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase; FKBP-type peptidylprolyl isomerase complement(1677329..1678114) Sphaerochaeta coccoides DSM 17374 10495753 YP_004412017.1 CDS Spico_1431 NC_015436.1 1678546 1679847 D COGs: COG0128 5-enolpyruvylshikimate-3-phosphate synthase; HAMAP: 3-phosphoshikimate 1-carboxyvinyltransferase; InterPro IPR006264:IPR001986; KEGG: ssm:Spirs_3939 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: Enolpyruvate transferase domain; PRIAM: 3-phosphoshikimate 1-carboxyvinyltransferase; SPTR: 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; IMG reference gene:2503957743; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; 3-phosphoshikimate 1-carboxyvinyltransferase 1678546..1679847 Sphaerochaeta coccoides DSM 17374 10495754 YP_004412018.1 CDS Spico_1432 NC_015436.1 1679834 1680877 D COGs: COG2008 Threonine aldolase; InterPro IPR001597; KEGG: ssm:Spirs_3940 threonine aldolase; PFAM: Aromatic amino acid beta-eliminating lyase/threonine aldolase; PRIAM: Threonine aldolase; SPTR: Threonine aldolase; IMG reference gene:2503957744; PFAM: Beta-eliminating lyase; threonine aldolase 1679834..1680877 Sphaerochaeta coccoides DSM 17374 10495755 YP_004412019.1 CDS Spico_1433 NC_015436.1 1680874 1682139 D COGs: COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities; InterPro IPR004839; KEGG: cbi:CLJ_B1515 aminotransferase, classes I and II; PFAM: Aminotransferase, class I/classII; PRIAM: Cystathionine beta-lyase; SPTR: Aminotransferase, classes I and II; IMG reference gene:2503957745; PFAM: Aminotransferase class I and II; cystathionine beta-lyase 1680874..1682139 Sphaerochaeta coccoides DSM 17374 10495756 YP_004412020.1 CDS Spico_1434 NC_015436.1 1682186 1685842 R COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR000212; KEGG: ssm:Spirs_3944 UvrD/REP helicase; PFAM: DNA helicase, UvrD/REP type; SPTR: ATP-dependent DNA helicase, UvrD/Rep family; IMG reference gene:2503957746; PFAM: UvrD/REP helicase; UvrD/REP helicase complement(1682186..1685842) Sphaerochaeta coccoides DSM 17374 10495757 YP_004412021.1 CDS Spico_1435 NC_015436.1 1685839 1688880 R KEGG: ssm:Spirs_3945 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957747; hypothetical protein complement(1685839..1688880) Sphaerochaeta coccoides DSM 17374 10495758 YP_004412022.1 CDS Spico_1436 NC_015436.1 1688919 1689899 D InterPro IPR003675; KEGG: rrs:RoseRS_4016 abortive infection protein; PFAM: Abortive infection protein; SPTR: Abortive infection protein; IMG reference gene:2503957748; PFAM: CAAX amino terminal protease; abortive infection protein 1688919..1689899 Sphaerochaeta coccoides DSM 17374 10495759 YP_004412023.1 CDS Spico_1437 NC_015436.1 1689947 1691110 D COGs: COG1864 DNA/RNA endonuclease G NUC1; InterPro IPR001604:IPR020821; KEGG: cts:Ctha_1807 DNA/RNA non-specific endonuclease; PFAM: DNA/RNA non-specific endonuclease; SMART: DNA/RNA non-specific endonuclease; Extracellular Endonuclease, subunit A; SPTR: DNA/RNA non-specific endonuclease; IMG reference gene:2503957749; PFAM: DNA/RNA non-specific endonuclease; DNA/RNA non-specific endonuclease 1689947..1691110 Sphaerochaeta coccoides DSM 17374 10495760 YP_004412024.1 CDS Spico_1438 NC_015436.1 1691238 1692578 D COGs: COG0371 Glycerol dehydrogenase; InterPro IPR002658; KEGG: bcv:Bcav_1503 glycerol-1-phosphate dehydrogenase (NAD(P)(+)); PFAM: 3-dehydroquinate synthase AroB; PRIAM: Glycerol-1-phosphate dehydrogenase (NAD(P)(+)); SPTR: Glycerol-1-phosphate dehydrogenase (NAD(P)(+)); IMG reference gene:2503957750; PFAM: 3-dehydroquinate synthase; Glycerol-1-phosphate dehydrogenase (NAD(P)(+)) 1691238..1692578 Sphaerochaeta coccoides DSM 17374 10495761 YP_004412025.1 CDS Spico_1439 NC_015436.1 1693068 1693217 D IMG reference gene:2503957752; hypothetical protein 1693068..1693217 Sphaerochaeta coccoides DSM 17374 10495763 YP_004412026.1 CDS Spico_1440 NC_015436.1 1693579 1699827 D KEGG: gdj:Gdia_2446 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957753; hypothetical protein 1693579..1699827 Sphaerochaeta coccoides DSM 17374 10495764 YP_004412027.1 CDS Spico_1441 NC_015436.1 1700098 1700373 D KEGG: osa:4332786 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957754; hypothetical protein 1700098..1700373 Sphaerochaeta coccoides DSM 17374 10495765 YP_004412028.1 CDS Spico_1442 NC_015436.1 1700528 1701067 R COGs: COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I C-terminal domain; InterPro IPR004647; KEGG: dly:Dehly_0361 hydro-lyase tartrate/fumarate subfamily subunit alpha; PFAM: Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain; PRIAM: Fumarate hydratase; SPTR: Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; TIGRFAM: Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain; IMG reference gene:2503957755; PFAM: Fumarase C-terminus; TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit beta complement(1700528..1701067) Sphaerochaeta coccoides DSM 17374 10495766 YP_004412029.1 CDS Spico_1443 NC_015436.1 1701060 1701986 R COGs: COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I N-terminal domain; InterPro IPR004646; KEGG: dds:Ddes_1528 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain; PRIAM: Fumarate hydratase; SPTR: Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha region; TIGRFAM: Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain; IMG reference gene:2503957756; PFAM: Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha complement(1701060..1701986) Sphaerochaeta coccoides DSM 17374 10495767 YP_004412030.1 CDS Spico_1444 NC_015436.1 1701986 1702546 R InterPro IPR006976; KEGG: hne:HNE_2912 hypothetical protein; PFAM: VanZ-like; SPTR: membrane protein; IMG reference gene:2503957757; PFAM: VanZ like family; VanZ family protein complement(1701986..1702546) Sphaerochaeta coccoides DSM 17374 10495768 YP_004412031.1 CDS Spico_1445 NC_015436.1 1702521 1703522 R COGs: COG1242 Fe-S oxidoreductase; InterPro IPR006638:IPR007197; KEGG: sta:STHERM_c02000 radical SAM protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Radical SAM protein; IMG reference gene:2503957758; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM protein, TIGR01212 family; radical SAM protein complement(1702521..1703522) Sphaerochaeta coccoides DSM 17374 10495769 YP_004412032.1 CDS Spico_1446 NC_015436.1 1703522 1705957 R COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641; KEGG: ssm:Spirs_3807 patatin; PFAM: Patatin/Phospholipase A2-related; SPTR: membrane protein; IMG reference gene:2503957759; PFAM: Patatin-like phospholipase; patatin complement(1703522..1705957) Sphaerochaeta coccoides DSM 17374 10495770 YP_004412033.1 CDS Spico_1447 NC_015436.1 1705959 1707008 R COGs: COG0223 Methionyl-tRNA formyltransferase; HAMAP: Methionyl-tRNA formyltransferase; InterPro IPR005794:IPR002376:IPR005793; KEGG: ssm:Spirs_1655 methionyl-tRNA formyltransferase; PFAM: Formyl transferase, C-terminal; Formyl transferase, N-terminal; PRIAM: Methionyl-tRNA formyltransferase; SPTR: Methionyl-tRNA formyltransferase; TIGRFAM: Methionyl-tRNA formyltransferase; IMG reference gene:2503957760; PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase; Methionyl-tRNA formyltransferase complement(1705959..1707008) Sphaerochaeta coccoides DSM 17374 10495771 YP_004412034.1 CDS Spico_1448 NC_015436.1 1706965 1707468 R COGs: COG0242 N-formylmethionyl-tRNA deformylase; HAMAP: Formylmethionine deformylase; InterPro IPR000181; KEGG: ssm:Spirs_1654 peptide deformylase; PFAM: Formylmethionine deformylase; SPTR: Peptide deformylase; TIGRFAM: Formylmethionine deformylase; IMG reference gene:2503957761; PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase; peptide deformylase complement(1706965..1707468) Sphaerochaeta coccoides DSM 17374 10495772 YP_004412035.1 CDS Spico_1449 NC_015436.1 1707850 1710015 D COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR002951:IPR011110:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; Atrophin-like; Two component regulator propeller; SPTR: Regulator of chromosome condensation, RCC1; IMG reference gene:2503957762; PFAM: Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 1707850..1710015 Sphaerochaeta coccoides DSM 17374 10495773 YP_004412036.1 CDS Spico_1451 NC_015436.1 1710398 1712401 R COGs: COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase; InterPro IPR014001:IPR001650:IPR005259:IPR011545; KEGG: ssm:Spirs_1653 primosomal protein N'; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: Primosomal protein N; TIGRFAM: Primosomal protein n; IMG reference gene:2503957764; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: primosomal protein N'; primosomal protein N' complement(1710398..1712401) Sphaerochaeta coccoides DSM 17374 10495775 YP_004412037.1 CDS Spico_1452 NC_015436.1 1712398 1713267 R COGs: COG1573 Uracil-DNA glycosylase; InterPro IPR005273:IPR005122; KEGG: ssm:Spirs_1652 phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase-like; SPTR: uncharacterized protein; TIGRFAM: Phage SPO1 DNA polymerase-related protein; IMG reference gene:2503957765; PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4; phage SPO1 DNA polymerase-related protein complement(1712398..1713267) Sphaerochaeta coccoides DSM 17374 10495776 YP_004412038.1 CDS Spico_1453 NC_015436.1 1713254 1714153 R COGs: COG0101 Pseudouridylate synthase; HAMAP: Pseudouridine synthase I, TruA; InterPro IPR001406:IPR020097; KEGG: cce:Ccel_0793 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; PRIAM: tRNA-pseudouridine synthase I; SPTR: tRNA pseudouridine synthase A; TIGRFAM: Pseudouridine synthase I, TruA; IMG reference gene:2503957766; PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I; tRNA pseudouridine synthase A complement(1713254..1714153) Sphaerochaeta coccoides DSM 17374 10495777 YP_004412039.1 CDS Spico_1454 NC_015436.1 1714140 1714541 R COGs: COG0736 Phosphopantetheinyl transferase (holo-ACP synthase); HAMAP: Holo-[acyl carrier protein] synthase; InterPro IPR002582:IPR004568:IPR008278; KEGG: sta:STHERM_c18350 holo-(acyl-carrier-protein) synthase; PFAM: 4'-phosphopantetheinyl transferase; SPTR: Holo-(Acyl-carrier-protein) synthase; TIGRFAM: Holo-[acyl carrier protein] synthase; Phosphopantethiene-protein transferase; IMG reference gene:2503957767; PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantethiene--protein transferase domain; holo-[acyl-carrier-protein] synthase; holo-ACP synthase complement(1714140..1714541) Sphaerochaeta coccoides DSM 17374 10495778 YP_004412040.1 CDS Spico_1455 NC_015436.1 1714543 1714962 R InterPro IPR012505; KEGG: ssm:Spirs_1648 YbbR family protein; PFAM: YbbR-like; SPTR: Membrane associated protein; IMG reference gene:2503957768; PFAM: YbbR-like protein; hypothetical protein complement(1714543..1714962) Sphaerochaeta coccoides DSM 17374 10495779 YP_004412041.1 CDS Spico_1456 NC_015436.1 1714949 1715767 R COGs: COG1624 conserved hypothetical protein; InterPro IPR014046:IPR003390; KEGG: ssm:Spirs_1647 protein of unknown function DUF147; PFAM: DNA integrity scanning protein, DisA, N-terminal; SPTR: uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP00159; IMG reference gene:2503957769; PFAM: DisA bacterial checkpoint controller nucleotide-binding; TIGRFAM: TIGR00159 family protein; hypothetical protein complement(1714949..1715767) Sphaerochaeta coccoides DSM 17374 10495780 YP_004412042.1 CDS Spico_1457 NC_015436.1 1715861 1718893 R COGs: COG1026 Zn-dependent peptidase insulinase-like; InterPro IPR011765:IPR007863:IPR013578; KEGG: ssm:Spirs_3660 peptidase M16C associated domain protein; PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; Peptidase M16C associated; SPTR: Presequence protease 1; IMG reference gene:2503957770; PFAM: Peptidase M16C associated; Peptidase M16 inactive domain; Insulinase (Peptidase M16); peptidase M16 domain-containing protein complement(1715861..1718893) Sphaerochaeta coccoides DSM 17374 10495781 YP_004412043.1 CDS Spico_1458 NC_015436.1 1719038 1719790 D COGs: COG0584 Glycerophosphoryl diester phosphodiesterase; InterPro IPR004129; KEGG: ssm:Spirs_3903 glycerophosphoryl diester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase; SPTR: Glycerophosphoryl diester phosphodiesterase, ; IMG reference gene:2503957771; PFAM: Glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 1719038..1719790 Sphaerochaeta coccoides DSM 17374 10495782 YP_004412044.1 CDS Spico_1459 NC_015436.1 1719828 1721246 R KEGG: tde:TDE0730 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957772; hypothetical protein complement(1719828..1721246) Sphaerochaeta coccoides DSM 17374 10495783 YP_004412045.1 CDS Spico_1460 NC_015436.1 1721260 1722384 R KEGG: yen:YE4032 hypothetical protein; SPTR: Cell envelope proteinase; IMG reference gene:2503957773; hypothetical protein complement(1721260..1722384) Sphaerochaeta coccoides DSM 17374 10495784 YP_004412046.1 CDS Spico_1461 NC_015436.1 1722386 1723633 R COGs: COG2195 Di- and tripeptidase; InterPro IPR010161:IPR002933:IPR011650; KEGG: ssm:Spirs_3909 peptidase T; PFAM: Peptidase M20, dimerisation; Peptidase M20; PRIAM: Tripeptide aminopeptidase; SPTR: Peptidase T; TIGRFAM: Peptidase M20B, tripeptide aminopeptidase; IMG reference gene:2503957774; PFAM: Peptidase M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: peptidase T; peptidase T complement(1722386..1723633) Sphaerochaeta coccoides DSM 17374 10495785 YP_004412047.1 CDS Spico_1462 NC_015436.1 1723738 1724607 R KEGG: ere:EUBREC_3205 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957775; hypothetical protein complement(1723738..1724607) Sphaerochaeta coccoides DSM 17374 10495786 YP_004412048.1 CDS Spico_1463 NC_015436.1 1724655 1725188 R KEGG: ctt:CtCNB1_3098 TRAP dicarboxylate transporter, DctM subunit; SPTR: TRAP dicarboxylate transporter, DctM subunit; IMG reference gene:2503957776; hypothetical protein complement(1724655..1725188) Sphaerochaeta coccoides DSM 17374 10495787 YP_004412049.1 CDS Spico_1464 NC_015436.1 1725571 1727799 D COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR011110:IPR000408; KEGG: aeh:Mlg_2688 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; Two component regulator propeller; SPTR: uncharacterized protein; IMG reference gene:2503957777; PFAM: Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 1725571..1727799 Sphaerochaeta coccoides DSM 17374 10495788 YP_004412050.1 CDS Spico_1465 NC_015436.1 1727884 1728387 R KEGG: isc:IscW_ISCW015120 GTP-binding protein, SPTR: GTP-binding protein, ; IMG reference gene:2503957778; hypothetical protein complement(1727884..1728387) Sphaerochaeta coccoides DSM 17374 10495789 YP_004412051.1 CDS Spico_1466 NC_015436.1 1728512 1730578 D KEGG: hoh:Hoch_6421 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957779; hypothetical protein 1728512..1730578 Sphaerochaeta coccoides DSM 17374 10495790 YP_004412052.1 CDS Spico_1467 NC_015436.1 1730924 1731028 R IMG reference gene:2503957780; hypothetical protein complement(1730924..1731028) Sphaerochaeta coccoides DSM 17374 10495791 YP_004412053.1 CDS Spico_1468 NC_015436.1 1731495 1731710 D KEGG: ele:Elen_0127 DNA binding domain protein, excisionase; SPTR: DNA binding domain protein, excisionase; IMG reference gene:2503957781; DNA binding domain-containing protein, excisionase 1731495..1731710 Sphaerochaeta coccoides DSM 17374 10495792 YP_004412054.1 CDS Spico_1469 NC_015436.1 1732100 1732372 R KEGG: mav:MAV_4833 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957782; hypothetical protein complement(1732100..1732372) Sphaerochaeta coccoides DSM 17374 10495793 YP_004412055.1 CDS Spico_1470 NC_015436.1 1732369 1732626 R KEGG: mka:MK1527 formylmethanofuran dehydrogenase subunit B, selenocysteine containing; SPTR: ferrichrome transport ATP-binding protein FhuC; IMG reference gene:2503957783; hypothetical protein complement(1732369..1732626) Sphaerochaeta coccoides DSM 17374 10495794 YP_004412056.1 CDS Spico_1471 NC_015436.1 1733262 1733900 D COGs: COG2344 AT-rich DNA-binding protein; HAMAP: Transcriptional repressor, redox-sensing, Rex; InterPro IPR003781:IPR009718:IPR022876; KEGG: ssm:Spirs_3692 CoA-binding domain protein; PFAM: CoA-binding; Rex DNA-binding, C-terminal; SMART: CoA-binding; SPTR: Redox-sensing transcriptional repressor rex; IMG reference gene:2503957784; PFAM: CoA binding domain; DNA-binding protein N-terminus; redox-sensing transcriptional repressor rex 1733262..1733900 Sphaerochaeta coccoides DSM 17374 10495795 YP_004412057.1 CDS Spico_1472 NC_015436.1 1733990 1734955 R COGs: COG1897 Homoserine trans-succinylase; HAMAP: Homoserine O-succinyltransferase; InterPro IPR005697; KEGG: ttm:Tthe_0712 homoserine O-succinyltransferase; PFAM: Homoserine O-succinyltransferase; PRIAM: Homoserine O-succinyltransferase; SPTR: Homoserine O-succinyltransferase; TIGRFAM: Homoserine O-succinyltransferase; IMG reference gene:2503957785; PFAM: Homoserine O-succinyltransferase; TIGRFAM: homoserine O-succinyltransferase; homoserine O-succinyltransferase complement(1733990..1734955) Sphaerochaeta coccoides DSM 17374 10495796 YP_004412058.1 CDS Spico_1473 NC_015436.1 1735040 1736338 R COGs: COG2873 O-acetylhomoserine sulfhydrylase; InterPro IPR006235:IPR000277; KEGG: cpy:Cphy_0010 O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; PRIAM: Cysteine synthase; SPTR: uncharacterized protein; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; IMG reference gene:2503957786; PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase; O-acetylhomoserine sulfhydrolase complement(1735040..1736338) Sphaerochaeta coccoides DSM 17374 10495797 YP_004412059.1 CDS Spico_1474 NC_015436.1 1736789 1737907 R InterPro IPR005135; KEGG: ssm:Spirs_3694 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase; IMG reference gene:2503957787; PFAM: Endonuclease/Exonuclease/phosphatase; hypothetical protein complement(1736789..1737907) Sphaerochaeta coccoides DSM 17374 10495798 YP_004412060.1 CDS Spico_1475 NC_015436.1 1737973 1740195 R KEGG: sta:STHERM_c14020 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957788; hypothetical protein complement(1737973..1740195) Sphaerochaeta coccoides DSM 17374 10495799 YP_004412061.1 CDS Spico_1476 NC_015436.1 1740234 1740974 R COGs: COG0740 Protease subunit of ATP-dependent Clp protease; HAMAP: Peptidase S14, ClpP; InterPro IPR001907; KEGG: sta:STHERM_c05540 hypothetical protein; PFAM: Peptidase S14, ClpP; PRIAM: Endopeptidase Clp; SPTR: ATP-dependent Clp protease proteolytic subunit; IMG reference gene:2503957789; PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; ATP-dependent Clp protease proteolytic subunit complement(1740234..1740974) Sphaerochaeta coccoides DSM 17374 10495800 YP_004412062.1 CDS Spico_1477 NC_015436.1 1741023 1742822 R KEGG: tde:TDE1234 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957790; hypothetical protein complement(1741023..1742822) Sphaerochaeta coccoides DSM 17374 10495801 YP_004412063.1 CDS Spico_1478 NC_015436.1 1742891 1744666 R KEGG: tde:TDE1234 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957791; hypothetical protein complement(1742891..1744666) Sphaerochaeta coccoides DSM 17374 10495802 YP_004412064.1 CDS Spico_1479 NC_015436.1 1745018 1746808 R KEGG: tde:TDE1234 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957792; hypothetical protein complement(1745018..1746808) Sphaerochaeta coccoides DSM 17374 10495803 YP_004412065.1 CDS Spico_1480 NC_015436.1 1747007 1747696 R COGs: COG1285 membrane protein; InterPro IPR003416; KEGG: snb:SP670_2012 MgtC/SapB transporter; PFAM: MgtC/SapB transporter; SPTR: MgtC/SapB transporter; IMG reference gene:2503957793; PFAM: MgtC family; MgtC/SapB transporter complement(1747007..1747696) Sphaerochaeta coccoides DSM 17374 10495804 YP_004412066.1 CDS Spico_1481 NC_015436.1 1747914 1748798 D COGs: COG1159 GTPase; HAMAP: GTP-binding protein Era; InterPro IPR005225:IPR005662:IPR002917:IPR004044; KEGG: ssm:Spirs_3698 GTP-binding protein Era; PFAM: GTP-binding protein, HSR1-related; K Homology, type 2; SPTR: GTP-binding protein; TIGRFAM: GTP-binding protein Era; Small GTP-binding protein; IMG reference gene:2503957794; PFAM: KH domain; GTPase of unknown function; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain; GTP-binding protein Era 1747914..1748798 Sphaerochaeta coccoides DSM 17374 10495805 YP_004412067.1 CDS Spico_1482 NC_015436.1 1748811 1750001 R COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: cwo:Cwoe_1260 ROK family protein; PFAM: ROK; SPTR: ROK family protein; IMG reference gene:2503957795; PFAM: ROK family; ROK family protein complement(1748811..1750001) Sphaerochaeta coccoides DSM 17374 10495806 YP_004412068.1 CDS Spico_1483 NC_015436.1 1750145 1751266 R InterPro IPR004300; KEGG: pst:PSPTO_4203 polysaccharide deacetylase; PFAM: Glycoside hydrolase, family 57, N-terminal; SPTR: Polysaccharide deacetylase; IMG reference gene:2503957796; PFAM: Glycosyl hydrolase 57; glycoside hydrolase 57 complement(1750145..1751266) Sphaerochaeta coccoides DSM 17374 10495807 YP_004412069.1 CDS Spico_1484 NC_015436.1 1751622 1752560 R COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: tle:Tlet_1114 amidohydrolase 2; PFAM: Amidohydrolase 2; SPTR: Amidohydrolase 2; IMG reference gene:2503957797; PFAM: Amidohydrolase; amidohydrolase complement(1751622..1752560) Sphaerochaeta coccoides DSM 17374 10495808 YP_004412070.1 CDS Spico_1485 NC_015436.1 1752606 1753421 R COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: atu:Atu4652 ABC transporter, membrane spanning protein (sugar); PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: ABC transporter, membrane spanning protein (Sugar); IMG reference gene:2503957798; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 2 complement(1752606..1753421) Sphaerochaeta coccoides DSM 17374 10495809 YP_004412071.1 CDS Spico_1486 NC_015436.1 1753408 1754316 R COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: atu:Atu4653 ABC transporter, membrane spanning protein (sugar); PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: ABC transporter, membrane spanning protein (Sugar); IMG reference gene:2503957799; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 1 complement(1753408..1754316) Sphaerochaeta coccoides DSM 17374 10495810 YP_004412072.1 CDS Spico_1487 NC_015436.1 1754410 1755708 R COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: tle:Tlet_1117 extracellular solute-binding protein; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein family 1; IMG reference gene:2503957800; PFAM: Bacterial extracellular solute-binding protein; carbohydrate ABC transporter substrate-binding protein complement(1754410..1755708) Sphaerochaeta coccoides DSM 17374 10495811 YP_004412073.1 CDS Spico_1488 NC_015436.1 1755945 1757885 R COGs: COG1109 Phosphomannomutase; InterPro IPR005844:IPR005845; KEGG: chy:CHY_2012 phosphoglucosamine mutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; PRIAM: Phosphoglucosamine mutase; SPTR: Phosphoglucosamine mutase; IMG reference gene:2503957801; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; phosphoglucosamine mutase complement(1755945..1757885) Sphaerochaeta coccoides DSM 17374 10495812 YP_004412074.1 CDS Spico_1489 NC_015436.1 1758257 1759849 R COGs: COG1384 Lysyl-tRNA synthetase (class I); HAMAP: Lysyl-tRNA synthetase, class I, archaeal-type; InterPro IPR002904:IPR020754:IPR020756; KEGG: ssm:Spirs_3699 lysyl-tRNA synthetase; PFAM: Lysyl-tRNA synthetase, class Ic; PRIAM: Lysine--tRNA ligase; SPTR: uncharacterized protein; TIGRFAM: Lysyl-tRNA synthetase, class I; IMG reference gene:2503957802; PFAM: tRNA synthetases class I (K); TIGRFAM: lysyl-tRNA synthetase, archaeal and spirochete; lysyl-tRNA synthetase complement(1758257..1759849) Sphaerochaeta coccoides DSM 17374 10495813 YP_004412075.1 CDS Spico_1490 NC_015436.1 1759850 1760626 D COGs: COG0797 Lipoprotein; InterPro IPR012997:IPR009009; KEGG: ssm:Spirs_0552 rare lipoprotein A; PFAM: Barwin-related endoglucanase; SPTR: RAre lipoprotein A rlpa; TIGRFAM: Rare lipoprotein A, bacterial; IMG reference gene:2503957803; PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; TIGRFAM: rare lipoprotein A; rare lipoprotein A 1759850..1760626 Sphaerochaeta coccoides DSM 17374 10495814 YP_004412076.1 CDS Spico_1491 NC_015436.1 1760709 1761905 R KEGG: lbf:LBF_1543 cytoplasmic membrane protein, ImpL63; SPTR: Macrolide export ATP-binding/permease MacB; IMG reference gene:2503957804; hypothetical protein complement(1760709..1761905) Sphaerochaeta coccoides DSM 17374 10495815 YP_004412077.1 CDS Spico_1492 NC_015436.1 1762481 1765135 R COGs: COG0525 Valyl-tRNA synthetase; HAMAP: Valyl-tRNA synthetase; InterPro IPR002303:IPR002300:IPR013155:IPR019499; KEGG: ssm:Spirs_2147 valyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ia; Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding; Valyl-tRNA synthetase, class Ia, tRNA-binding arm; PRIAM: Valine--tRNA ligase; SPTR: Valyl-tRNA synthetase; TIGRFAM: Valyl-tRNA synthetase; IMG reference gene:2503957806; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase; valyl-tRNA synthetase complement(1762481..1765135) Sphaerochaeta coccoides DSM 17374 10495817 YP_004412078.1 CDS Spico_1493 NC_015436.1 1765405 1766625 R InterPro IPR011701; KEGG: cbt:CLH_2235 permease of the major facilitator superfamily; PFAM: Major facilitator superfamily MFS-1; SPTR: Possible MDR-type permease; IMG reference gene:2503957807; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein complement(1765405..1766625) Sphaerochaeta coccoides DSM 17374 10495818 YP_004412079.1 CDS Spico_1494 NC_015436.1 1766732 1767523 R COGs: COG4587 ABC-type uncharacterized transport system permease component; InterPro IPR010390; KEGG: fnu:FN0879 ABC transporter integral membrane protein; PFAM: Protein of unknown function DUF990; SPTR: Membrane protein; IMG reference gene:2503957808; PFAM: Protein of unknown function (DUF990); hypothetical protein complement(1766732..1767523) Sphaerochaeta coccoides DSM 17374 10495819 YP_004412080.1 CDS Spico_1495 NC_015436.1 1767520 1768539 R COGs: COG4586 ABC-type uncharacterized transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: fnu:FN0880 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Daunorubicin resistance ATP-binding protein drrA; IMG reference gene:2503957809; PFAM: ABC transporter; ABC transporter complement(1767520..1768539) Sphaerochaeta coccoides DSM 17374 10495820 YP_004412081.1 CDS Spico_1496 NC_015436.1 1768520 1769308 R COGs: COG3694 ABC-type uncharacterized transport system permease component; InterPro IPR010390; KEGG: fnu:FN0881 ABC transporter integral membrane protein; PFAM: Protein of unknown function DUF990; SPTR: ABC transporter permease; IMG reference gene:2503957810; PFAM: Protein of unknown function (DUF990); hypothetical protein complement(1768520..1769308) Sphaerochaeta coccoides DSM 17374 10495821 YP_004412082.1 CDS Spico_1497 NC_015436.1 1769321 1769893 R COGs: COG2818 3-methyladenine DNA glycosylase; InterPro IPR005019; KEGG: vpr:Vpar_1788 methyladenine glycosylase; PFAM: Methyladenine glycosylase; PRIAM: DNA-3-methyladenine glycosylase I; SPTR: DNA-3-methyladenine glycosylase I; IMG reference gene:2503957811; PFAM: Methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I; DNA-3-methyladenine glycosylase I complement(1769321..1769893) Sphaerochaeta coccoides DSM 17374 10495822 YP_004412083.1 CDS Spico_1498 NC_015436.1 1770034 1772868 R COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits; KEGG: ere:EUBREC_0650 DNA helicase; SPTR: DNA helicase; IMG reference gene:2503957812; PFAM: UvrD/REP helicase; Protein of unknown function (DUF2726); DNA helicase complement(1770034..1772868) Sphaerochaeta coccoides DSM 17374 10495823 YP_004412084.1 CDS Spico_1499 NC_015436.1 1773078 1774133 R COGs: COG3177 conserved hypothetical protein; InterPro IPR003812; KEGG: clo:HMPREF0868_0124 Fic family protein; PFAM: Filamentation induced by cAMP/death on curing-related; SPTR: Fic family protein; IMG reference gene:2503957813; PFAM: Fic/DOC family; Fic family protein complement(1773078..1774133) Sphaerochaeta coccoides DSM 17374 10495824 YP_004412085.1 CDS Spico_1500 NC_015436.1 1774488 1774661 D IMG reference gene:2503957814; hypothetical protein 1774488..1774661 Sphaerochaeta coccoides DSM 17374 10495825 YP_004412086.1 CDS Spico_1501 NC_015436.1 1774777 1777440 D COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: sus:Acid_1929 LmbE family protein; PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; SPTR: LmbE family protein; IMG reference gene:2503957815; PFAM: GlcNAc-PI de-N-acetylase; LmbE family protein 1774777..1777440 Sphaerochaeta coccoides DSM 17374 10495826 YP_004412087.1 CDS Spico_1502 NC_015436.1 1777655 1779064 R COGs: COG1282 NAD/NADP transhydrogenase beta subunit; InterPro IPR004003; KEGG: lic:LIC10290 H+-translocating transhydrogenase subunit beta; PFAM: NAD(P) transhydrogenase, beta subunit; PRIAM: NAD(P)(+) transhydrogenase (AB-specific); SPTR: NAD(P) transhydrogenase subunit beta; IMG reference gene:2503957816; PFAM: NAD(P) transhydrogenase beta subunit; NAD(P)(+) transhydrogenase complement(1777655..1779064) Sphaerochaeta coccoides DSM 17374 10495827 YP_004412088.1 CDS Spico_1503 NC_015436.1 1779061 1779345 R COGs: COG3288 NAD/NADP transhydrogenase alpha subunit; KEGG: lbf:LBF_0175 NAD(P)(+) transhydrogenase-like protein; SPTR: Proton-translocating transhydrogenase subunit alpha 2; IMG reference gene:2503957817; NAD(P)(+) transhydrogenase-like protein complement(1779061..1779345) Sphaerochaeta coccoides DSM 17374 10495828 YP_004412089.1 CDS Spico_1504 NC_015436.1 1779342 1780511 R COGs: COG3288 NAD/NADP transhydrogenase alpha subunit; InterPro IPR007886:IPR007698; KEGG: abo:ABO_1329 pyridine nucleotide transhydrogenase A subunit; PFAM: Alanine dehydrogenase/PNT, C-terminal; Alanine dehydrogenase/PNT, N-terminal; PRIAM: NAD(P)(+) transhydrogenase (AB-specific); SPTR: Nicotinamide nucleotide transhydrogenase, subunit alpha; IMG reference gene:2503957818; PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: NAD(P) transhydrogenase, alpha subunit; NAD(P)(+) transhydrogenase complement(1779342..1780511) Sphaerochaeta coccoides DSM 17374 10495829 YP_004412090.1 CDS Spico_1505 NC_015436.1 1780777 1782192 R COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR006094:IPR004113; KEGG: amt:Amet_3747 FAD linked oxidase domain-containing protein; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; PRIAM: D-lactate dehydrogenase (cytochrome); SPTR: FAD linked oxidase domain protein; IMG reference gene:2503957819; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD; D-lactate dehydrogenase complement(1780777..1782192) Sphaerochaeta coccoides DSM 17374 10495830 YP_004412091.1 CDS Spico_1506 NC_015436.1 1782189 1783214 R COGs: COG2025 Electron transfer flavoprotein alpha subunit; InterPro IPR014730:IPR014731; KEGG: amt:Amet_3748 electron transfer flavoprotein, alpha subunit-like protein; PFAM: Electron transfer flavoprotein, alpha subunit, C-terminal; Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SPTR: Electron transfer flavoprotein, alpha subunit-like protein; IMG reference gene:2503957820; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain; electron transfer flavoprotein subunit alpha complement(1782189..1783214) Sphaerochaeta coccoides DSM 17374 10495831 YP_004412092.1 CDS Spico_1507 NC_015436.1 1783207 1784064 R COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR014730; KEGG: amt:Amet_3749 electron transfer flavoprotein, alpha/beta-subunit-like protein; PFAM: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SPTR: Electron transfer flavoprotein, alpha/beta-subunit-like protein; IMG reference gene:2503957821; PFAM: Electron transfer flavoprotein domain; electron transfer flavoprotein subunit alpha/beta complement(1783207..1784064) Sphaerochaeta coccoides DSM 17374 10495832 YP_004412093.1 CDS Spico_1508 NC_015436.1 1784171 1785808 R COGs: COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component); InterPro IPR006318:IPR008731:IPR008279:IPR000121; KEGG: csc:Csac_2437 phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilising enzyme; Phosphotransferase system, PEP-utilising enzyme, N-terminal; PEP-utilising enzyme, mobile domain; PRIAM: Phosphoenolpyruvate--protein phosphotransferase; SPTR: Phosphoenolpyruvate--protein phosphotransferase; TIGRFAM: Phosphoenolpyruvate-protein phosphotransferase; IMG reference gene:2503957822; PFAM: PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; phosphoenolpyruvate-protein phosphotransferase complement(1784171..1785808) Sphaerochaeta coccoides DSM 17374 10495833 YP_004412094.1 CDS Spico_1509 NC_015436.1 1785827 1786084 R COGs: COG1925 Phosphotransferase system HPr-related protein; InterPro IPR005698; KEGG: eel:EUBELI_20516 phosphocarrier protein HPr; PFAM: Phosphotransferase system, phosphocarrier HPr protein; SPTR: uncharacterized protein; TIGRFAM: Phosphotransferase system, phosphocarrier HPr protein; IMG reference gene:2503957823; PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family; phosphotransferase system, phosphocarrier protein HPr complement(1785827..1786084) Sphaerochaeta coccoides DSM 17374 10495834 YP_004412095.1 CDS Spico_1510 NC_015436.1 1786150 1787364 R COGs: COG1015 Phosphopentomutase; InterPro IPR006124; KEGG: sfv:SFV_3385 mutase; PFAM: Metalloenzyme; SPTR: Phosphopentomutase; IMG reference gene:2503957824; PFAM: Metalloenzyme superfamily; metalloenzyme domain-containing protein complement(1786150..1787364) Sphaerochaeta coccoides DSM 17374 10495835 YP_004412096.1 CDS Spico_1511 NC_015436.1 1787404 1788567 R COGs: COG3457 amino acid racemase; InterPro IPR001608; KEGG: thx:Thet_0218 alanine racemase domain-containing protein; PFAM: Alanine racemase, N-terminal; SPTR: uncharacterized protein; IMG reference gene:2503957825; PFAM: Alanine racemase, N-terminal domain; alanine racemase complement(1787404..1788567) Sphaerochaeta coccoides DSM 17374 10495836 YP_004412097.1 CDS Spico_1512 NC_015436.1 1788575 1789696 R KEGG: csh:Closa_2021 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957826; PFAM: Aminotransferase class-V; hypothetical protein complement(1788575..1789696) Sphaerochaeta coccoides DSM 17374 10495837 YP_004412098.1 CDS Spico_1513 NC_015436.1 1789702 1790592 R COGs: COG1735 metal-dependent hydrolase with the TIM-barrel fold; InterPro IPR001559; KEGG: str:Sterm_0361 aryldialkylphosphatase; PFAM: Aryldialkylphosphatase; SPTR: Phosphotriesterase-like protein; IMG reference gene:2503957827; PFAM: Phosphotriesterase; aryldialkylphosphatase complement(1789702..1790592) Sphaerochaeta coccoides DSM 17374 10495838 YP_004412099.1 CDS Spico_1514 NC_015436.1 1790589 1791710 R KEGG: csh:Closa_2023 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957828; PFAM: Amidase; hypothetical protein complement(1790589..1791710) Sphaerochaeta coccoides DSM 17374 10495839 YP_004412100.1 CDS Spico_1515 NC_015436.1 1791786 1793072 R InterPro IPR019733; KEGG: ttm:Tthe_1693 protein of unknown function, YhfT; PFAM: Uncharacterised protein family YhfT; SPTR: uncharacterized protein; IMG reference gene:2503957829; PFAM: Protein of unknown function; hypothetical protein complement(1791786..1793072) Sphaerochaeta coccoides DSM 17374 10495840 YP_004412101.1 CDS Spico_1516 NC_015436.1 1793115 1793471 R KEGG: xbo:XBJ1_0132 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957830; PFAM: Protein of unknown function DUF2620; hypothetical protein complement(1793115..1793471) Sphaerochaeta coccoides DSM 17374 10495841 YP_004412102.1 CDS Spico_1517 NC_015436.1 1793482 1793844 R InterPro IPR011608; KEGG: sth:STH556 transcriptional antiterminator; PFAM: PRD; SPTR: Predicted protein; IMG reference gene:2503957831; PFAM: PRD domain; PRD domain-containing protein complement(1793482..1793844) Sphaerochaeta coccoides DSM 17374 10495842 YP_004412103.1 CDS Spico_1518 NC_015436.1 1793871 1794815 R KEGG: thx:Thet_0211 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957832; hypothetical protein complement(1793871..1794815) Sphaerochaeta coccoides DSM 17374 10495843 YP_004412104.1 CDS Spico_1519 NC_015436.1 1795112 1796293 D COGs: COG1979 Uncharacterized oxidoreductase Fe-dependent alcohol dehydrogenase; InterPro IPR001670; KEGG: apa:APP7_1949 probable NADH-dependent butanol dehydrogenase 1; PFAM: Alcohol dehydrogenase, iron-type; PRIAM: Alcohol dehydrogenase; SPTR: Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase; IMG reference gene:2503957833; PFAM: Iron-containing alcohol dehydrogenase; alcohol dehydrogenase 1795112..1796293 Sphaerochaeta coccoides DSM 17374 10495844 YP_004412105.1 CDS Spico_1520 NC_015436.1 1796325 1798256 R COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR001140:IPR003439; KEGG: ssm:Spirs_3268 ABC transporter related protein; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC-type multidrug transport system, ATPase and permease components; IMG reference gene:2503957834; PFAM: ABC transporter transmembrane region; ABC transporter; xenobiotic-transporting ATPase complement(1796325..1798256) Sphaerochaeta coccoides DSM 17374 10495845 YP_004412106.1 CDS Spico_1521 NC_015436.1 1798249 1800000 R COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR001140:IPR003439; KEGG: ssm:Spirs_3269 ABC transporter related protein; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: uncharacterized protein; IMG reference gene:2503957835; PFAM: ABC transporter transmembrane region; ABC transporter; xenobiotic-transporting ATPase complement(1798249..1800000) Sphaerochaeta coccoides DSM 17374 10495846 YP_004412107.1 CDS Spico_1522 NC_015436.1 1800019 1800474 R InterPro IPR000835; KEGG: ssm:Spirs_3270 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator, MarR family; IMG reference gene:2503957836; PFAM: MarR family; regulatory protein MarR complement(1800019..1800474) Sphaerochaeta coccoides DSM 17374 10495847 YP_004412108.1 CDS Spico_1523 NC_015436.1 1800951 1803296 D COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR011110:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; Listeria/Bacterioides repeat; Two component regulator propeller; SPTR: uncharacterized protein; IMG reference gene:2503957837; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 1800951..1803296 Sphaerochaeta coccoides DSM 17374 10495848 YP_004412109.1 CDS Spico_1524 NC_015436.1 1803615 1805957 D COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; Listeria/Bacterioides repeat; SPTR: uncharacterized protein; IMG reference gene:2503957838; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 1803615..1805957 Sphaerochaeta coccoides DSM 17374 10495849 YP_004412110.1 CDS Spico_1525 NC_015436.1 1806269 1808893 D COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR011110:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Listeria/Bacterioides repeat; Two component regulator propeller; Regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; TIGRFAM: Listeria/Bacterioides repeat; IMG reference gene:2503957839; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; TIGRFAM: Listeria/Bacterioides repeat; cell wall/surface repeat protein 1806269..1808893 Sphaerochaeta coccoides DSM 17374 10495850 YP_004412111.1 CDS Spico_1526 NC_015436.1 1809074 1809436 R InterPro IPR014922; KEGG: gur:Gura_3522 hypothetical protein; PFAM: Protein of unknown function DUF1801; SPTR: uncharacterized protein; IMG reference gene:2503957840; PFAM: Domain of unknown function (DU1801); hypothetical protein complement(1809074..1809436) Sphaerochaeta coccoides DSM 17374 10495851 YP_004412112.1 CDS Spico_1527 NC_015436.1 1809423 1810817 R COGs: COG1114 Branched-chain amino acid permease; InterPro IPR004685; KEGG: efa:EF0243 branched-chain amino acid transport system II carrier protein; PFAM: Branched-chain amino acid transport system II carrier protein; SPTR: Branched-chain amino acid transport system II carrier protein; TIGRFAM: Branched-chain amino acid transport system II carrier protein; IMG reference gene:2503957841; PFAM: Branched-chain amino acid transport protein; TIGRFAM: branched-chain amino acid uptake carrier; branched-chain amino acid transport system II carrier protein complement(1809423..1810817) Sphaerochaeta coccoides DSM 17374 10495852 YP_004412113.1 CDS Spico_1528 NC_015436.1 1810886 1811638 R COGs: COG0730 permease; InterPro IPR002781; KEGG: cbt:CLH_3273 transporter; PFAM: Protein of unknown function DUF81; SPTR: Transporter; IMG reference gene:2503957842; PFAM: Sulfite exporter TauE/SafE; hypothetical protein complement(1810886..1811638) Sphaerochaeta coccoides DSM 17374 10495853 YP_004412114.1 CDS Spico_1529 NC_015436.1 1811761 1814895 R InterPro IPR006104:IPR006103; KEGG: cpy:Cphy_3081 glycoside hydrolase; PFAM: Glycoside hydrolase, family 2, carbohydrate-binding; Glycoside hydrolase, family 2, TIM barrel; SPTR: Glycoside hydrolase 2 sugar binding; IMG reference gene:2503957843; glycoside hydrolase 2 sugar binding protein complement(1811761..1814895) Sphaerochaeta coccoides DSM 17374 10495854 YP_004412115.1 CDS Spico_1530 NC_015436.1 1814951 1815616 R InterPro IPR015305; KEGG: bld:BLi01374 YesU; PFAM: Protein of unknown function DUF1961; SPTR: YesU; IMG reference gene:2503957844; PFAM: Domain of unknown function (DUF1961); hypothetical protein complement(1814951..1815616) Sphaerochaeta coccoides DSM 17374 10495855 YP_004412116.1 CDS Spico_1531 NC_015436.1 1815662 1818397 R KEGG: cpy:Cphy_3080 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957845; hypothetical protein complement(1815662..1818397) Sphaerochaeta coccoides DSM 17374 10495856 YP_004412117.1 CDS Spico_1532 NC_015436.1 1818614 1820167 R COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: cpy:Cphy_0341 extracellular solute-binding protein; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: uncharacterized protein; IMG reference gene:2503957846; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein complement(1818614..1820167) Sphaerochaeta coccoides DSM 17374 10495857 YP_004412118.1 CDS Spico_1533 NC_015436.1 1820230 1821132 R COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: cpy:Cphy_0340 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: uncharacterized protein; IMG reference gene:2503957847; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 2 complement(1820230..1821132) Sphaerochaeta coccoides DSM 17374 10495858 YP_004412119.1 CDS Spico_1534 NC_015436.1 1821149 1822129 R COGs: COG4209 ABC-type polysaccharide transport system permease component; InterPro IPR000515; KEGG: cob:COB47_1870 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: uncharacterized protein; IMG reference gene:2503957848; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 1 complement(1821149..1822129) Sphaerochaeta coccoides DSM 17374 10495859 YP_004412120.1 CDS Spico_1535 NC_015436.1 1822286 1824076 R COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR001140:IPR003439; KEGG: pjd:Pjdr2_0901 ABC transporter related; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: uncharacterized protein; IMG reference gene:2503957849; PFAM: ABC transporter transmembrane region; ABC transporter; xenobiotic-transporting ATPase complement(1822286..1824076) Sphaerochaeta coccoides DSM 17374 10495860 YP_004412121.1 CDS Spico_1536 NC_015436.1 1824078 1825817 R COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR001140:IPR003439; KEGG: pjd:Pjdr2_0902 ABC transporter related; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter ATP-binding protein; IMG reference gene:2503957850; PFAM: ABC transporter transmembrane region; ABC transporter; xenobiotic-transporting ATPase complement(1824078..1825817) Sphaerochaeta coccoides DSM 17374 10495861 YP_004412122.1 CDS Spico_1537 NC_015436.1 1825975 1826613 R COGs: COG0637 phosphatase/phosphohexomutase; InterPro IPR010972:IPR010976:IPR006402:IPR005834; KEGG: csh:Closa_0870 beta-phosphoglucomutase; PFAM: Haloacid dehalogenase-like hydrolase; PRIAM: Beta-phosphoglucomutase; SPTR: Beta-phosphoglucomutase; TIGRFAM: Beta-phosphoglucomutase; Beta-phosphoglucomutase hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; IMG reference gene:2503957851; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: beta-phosphoglucomutase; beta-phosphoglucomutase hydrolase; haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; beta-phosphoglucomutase complement(1825975..1826613) Sphaerochaeta coccoides DSM 17374 10495862 YP_004412123.1 CDS Spico_1538 NC_015436.1 1826613 1828988 R COGs: COG1554 Trehalose and maltose hydrolase (possible phosphorylase); InterPro IPR005196:IPR005195:IPR005194; KEGG: gym:GYMC10_0477 glycoside hydrolase 65 central catalytic; PFAM: Glycoside hydrolase, family 65, central catalytic; Glycoside hydrolase, family 65, N-terminal; Glycoside hydrolase, family 65, C-terminal; PRIAM: Kojibiose phosphorylase; SPTR: uncharacterized protein; IMG reference gene:2503957852; PFAM: Glycosyl hydrolase 65, C-terminal domain; Glycosyl hydrolase 65 central catalytic domain; Glycosyl hydrolase 65, N-terminal domain; Kojibiose phosphorylase complement(1826613..1828988) Sphaerochaeta coccoides DSM 17374 10495863 YP_004412124.1 CDS Spico_1539 NC_015436.1 1828988 1829842 R COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: gym:GYMC10_0424 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503957853; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 2 complement(1828988..1829842) Sphaerochaeta coccoides DSM 17374 10495864 YP_004412125.1 CDS Spico_1540 NC_015436.1 1829839 1830720 R COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: gym:GYMC10_0423 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503957854; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 1 complement(1829839..1830720) Sphaerochaeta coccoides DSM 17374 10495865 YP_004412126.1 CDS Spico_1541 NC_015436.1 1830781 1831995 R COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: gym:GYMC10_0422 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein family 1; IMG reference gene:2503957855; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein complement(1830781..1831995) Sphaerochaeta coccoides DSM 17374 10495866 YP_004412127.1 CDS Spico_1542 NC_015436.1 1832302 1833357 R COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: gym:GYMC10_0421 transcriptional regulator, LacI family; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI; SPTR: Transcriptional regulator, LacI family; IMG reference gene:2503957856; PFAM: Bacterial regulatory proteins, lacI family; family; LacI family transcriptional regulator complement(1832302..1833357) Sphaerochaeta coccoides DSM 17374 10495867 YP_004412128.1 CDS Spico_1543 NC_015436.1 1833499 1833852 D COGs: COG3830 ACT domain-containing protein; HAMAP: Uncharacterised protein family UPF0237, ACT domain-containing; InterPro IPR022986:IPR002912; KEGG: bde:BDP_1787 ACT domain-containing protein; PFAM: Amino acid-binding ACT; SPTR: uncharacterized protein; IMG reference gene:2503957857; PFAM: ACT domain; ACT domain-containing protein 1833499..1833852 Sphaerochaeta coccoides DSM 17374 10495868 YP_004412129.1 CDS Spico_1544 NC_015436.1 1833903 1835267 D COGs: COG2848 conserved hypothetical protein; HAMAP: Uncharacterised protein family UPF0210; InterPro IPR007841; KEGG: cpy:Cphy_2797 hypothetical protein; PFAM: Uncharacterised protein family UPF0210; SPTR: UPF0210 protein Cphy_2797; IMG reference gene:2503957858; PFAM: Uncharacterized ACR (DUF711); hypothetical protein 1833903..1835267 Sphaerochaeta coccoides DSM 17374 10495869 YP_004412130.1 CDS Spico_1546 NC_015436.1 1835453 1835848 R COGs: COG5015 conserved hypothetical protein; InterPro IPR011576; KEGG: bpb:bpr_I1023 pyridoxamine 5'-phosphate oxidase; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; SPTR: Pyridoxamine 5'-phosphate oxidase; IMG reference gene:2503957860; PFAM: Pyridoxamine 5'-phosphate oxidase; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(1835453..1835848) Sphaerochaeta coccoides DSM 17374 10495871 YP_004412131.1 CDS Spico_1547 NC_015436.1 1836245 1837264 D KEGG: bfr:BF3847 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957861; hypothetical protein 1836245..1837264 Sphaerochaeta coccoides DSM 17374 10495872 YP_004412132.1 CDS Spico_1548 NC_015436.1 1837351 1838757 R COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: cbk:CLL_A1589 Na+-driven multidrug efflux pump; PFAM: Multi antimicrobial extrusion protein; SPTR: Mate efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein; IMG reference gene:2503957862; PFAM: MatE; TIGRFAM: efflux protein, MATE family; MATE efflux family protein complement(1837351..1838757) Sphaerochaeta coccoides DSM 17374 10495873 YP_004412133.1 CDS Spico_1549 NC_015436.1 1838897 1839673 R COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR012838:IPR007197; KEGG: efa:EF1612 pyruvate formate-lyase activating enzyme; PFAM: Radical SAM; PRIAM: [Formate-C-acetyltransferase]-activating enzyme; SPTR: Pyruvate formate-lyase 1-activating enzyme; TIGRFAM: Pyruvate formate-lyase activating; IMG reference gene:2503957863; PFAM: Radical SAM superfamily; TIGRFAM: pyruvate formate-lyase 1-activating enzyme; pyruvate formate-lyase activating enzyme complement(1838897..1839673) Sphaerochaeta coccoides DSM 17374 10495874 YP_004412134.1 CDS Spico_1550 NC_015436.1 1839744 1841981 R COGs: COG1882 Pyruvate-formate lyase; InterPro IPR005949:IPR004184:IPR001150; KEGG: efa:EF1613 formate acetyltransferase; PFAM: Pyruvate formate-lyase, PFL; Formate C-acetyltransferase glycine radical; PRIAM: Formate C-acetyltransferase; SPTR: Formate acetyltransferase; TIGRFAM: Formate acetyltransferase; IMG reference gene:2503957864; PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: formate acetyltransferase 1; formate acetyltransferase complement(1839744..1841981) Sphaerochaeta coccoides DSM 17374 10495875 YP_004412135.1 CDS Spico_1551 NC_015436.1 1842360 1843394 D COGs: COG2502 Asparagine synthetase A; HAMAP: Aspartate--ammonia ligase; InterPro IPR004618; KEGG: pdi:BDI_3717 asparagine synthetase AsnA; PFAM: Aspartate--ammonia ligase; PRIAM: Aspartate--ammonia ligase; SPTR: Aspartate--ammonia ligase; TIGRFAM: Aspartate--ammonia ligase; IMG reference gene:2503957865; PFAM: Aspartate-ammonia ligase; TIGRFAM: aspartate--ammonia ligase, AsnA-type; aspartate--ammonia ligase 1842360..1843394 Sphaerochaeta coccoides DSM 17374 10495876 YP_004412136.1 CDS Spico_1552 NC_015436.1 1843424 1844665 D COGs: COG2081 flavoprotein; InterPro IPR004792; KEGG: mhu:Mhun_1926 HI0933-like protein; PFAM: Conserved hypothetical protein CHP00275, flavoprotein HI0933-like; SPTR: HI0933 family protein; TIGRFAM: Conserved hypothetical protein CHP00275, flavoprotein HI0933-like; IMG reference gene:2503957866; PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family; hypothetical protein 1843424..1844665 Sphaerochaeta coccoides DSM 17374 10495877 YP_004412137.1 CDS Spico_1553 NC_015436.1 1844790 1845350 D COGs: COG0431 flavoprotein; InterPro IPR005025; KEGG: cpy:Cphy_1114 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR: NADPH-dependent FMN reductase; IMG reference gene:2503957867; PFAM: NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 1844790..1845350 Sphaerochaeta coccoides DSM 17374 10495878 YP_004412138.1 CDS Spico_1554 NC_015436.1 1845469 1848543 R InterPro IPR011493; KEGG: hwa:HQ1081A halomucin; SPTR: Halomucin; IMG reference gene:2503957868; hypothetical protein complement(1845469..1848543) Sphaerochaeta coccoides DSM 17374 10495879 YP_004412139.1 CDS Spico_1555 NC_015436.1 1849050 1850192 R COGs: COG2055 Malate/L-lactate dehydrogenase; InterPro IPR003767; KEGG: kol:Kole_0486 malate/L-lactate dehydrogenase; PFAM: Malate/L-lactate dehydrogenase; PRIAM: Malate dehydrogenase; SPTR: Malate/L-lactate dehydrogenase; IMG reference gene:2503957869; PFAM: Malate/L-lactate dehydrogenase; malate dehydrogenase complement(1849050..1850192) Sphaerochaeta coccoides DSM 17374 10495880 YP_004412140.1 CDS Spico_1556 NC_015436.1 1850385 1851203 R COGs: COG1349 Transcriptional regulators of sugar metabolism; InterPro IPR001034:IPR014036; KEGG: pca:Pcar_0940 DeoR-type transcriptional regulator; PFAM: HTH transcriptional regulator, DeoR; HTH transcriptional regulator, DeoR N-terminal; SMART: HTH transcriptional regulator, DeoR N-terminal; SPTR: Transcriptional regulator, DeoR family; IMG reference gene:2503957870; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain; DeoR family transcriptional regulator complement(1850385..1851203) Sphaerochaeta coccoides DSM 17374 10495881 YP_004412141.1 CDS Spico_1557 NC_015436.1 1851260 1852759 R COGs: COG0554 Glycerol kinase; HAMAP: Glycerol kinase; InterPro IPR005999:IPR018484:IPR018485; KEGG: ssm:Spirs_1645 glycerol kinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; PRIAM: Glycerol kinase; SPTR: Glycerol kinase; TIGRFAM: Glycerol kinase; IMG reference gene:2503957871; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase; glycerol kinase complement(1851260..1852759) Sphaerochaeta coccoides DSM 17374 10495882 YP_004412142.1 CDS Spico_1558 NC_015436.1 1852954 1854192 R COGs: COG3007 Uncharacterized paraquat-inducible protein B; HAMAP: Uncharacterised protein family, TER reductase; InterPro IPR010758; KEGG: sta:STHERM_c16300 trans-2-enoyl-CoA reductase; PFAM: Uncharacterised protein family, TER reductase; PRIAM: Trans-2-enoyl-CoA reductase (NAD(+)); SPTR: Trans-2-enoyl-CoA reductase; IMG reference gene:2503957872; PFAM: Trans-2-enoyl-CoA reductase catalytic region; NAD(P)H binding domain of trans-2-enoyl-CoA reductase; Enoyl reductase FAD binding domain; reductase complement(1852954..1854192) Sphaerochaeta coccoides DSM 17374 10495883 YP_004412143.1 CDS Spico_1559 NC_015436.1 1854189 1854662 R COGs: COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase; InterPro IPR013114; KEGG: sta:STHERM_c08550 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; SPTR: Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabZ; IMG reference gene:2503957873; PFAM: FabA-like domain; 3-hydroxyacyl-ACP dehydratase complement(1854189..1854662) Sphaerochaeta coccoides DSM 17374 10495884 YP_004412144.1 CDS Spico_1560 NC_015436.1 1854697 1855956 R COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR017568:IPR014030:IPR014031:IPR020841; KEGG: ssm:Spirs_2300 3-oxoacyl-(acyl-carrier-protein) synthase 2; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase II; SMART: Polyketide synthase, beta-ketoacyl synthase domain; SPTR: 3-oxoacyl-[acyl-carrier-protein] synthase 2; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; IMG reference gene:2503957874; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II; 3-oxoacyl-ACP synthase complement(1854697..1855956) Sphaerochaeta coccoides DSM 17374 10495885 YP_004412145.1 CDS Spico_1561 NC_015436.1 1855968 1856753 R COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR011284:IPR002198:IPR020842; KEGG: sta:STHERM_c21540 3-oxoacyl-[acyl-carrier-protein] reductase; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SMART: Polyketide synthase/Fatty acid synthase, KR; SPTR: 3-oxoacyl-[acyl-carrier-protein] reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; IMG reference gene:2503957875; PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-ACP reductase complement(1855968..1856753) Sphaerochaeta coccoides DSM 17374 10495886 YP_004412146.1 CDS Spico_1562 NC_015436.1 1856746 1857738 R COGs: COG0331 (acyl-carrier-protein) S-malonyltransferase; InterPro IPR014043:IPR020801; KEGG: sta:STHERM_c21550 hypothetical protein; PFAM: Acyl transferase; PRIAM: [Acyl-carrier-protein] S-malonyltransferase; SMART: Polyketide synthase, acyl transferase domain; SPTR: uncharacterized protein; IMG reference gene:2503957876; PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; ACP S-malonyltransferase complement(1856746..1857738) Sphaerochaeta coccoides DSM 17374 10495887 YP_004412147.1 CDS Spico_1563 NC_015436.1 1857878 1858378 D COGs: COG0511 Biotin carboxyl carrier protein; InterPro IPR001249:IPR000089; KEGG: bts:Btus_0728 acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: Biotin/lipoyl attachment; SPTR: Acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: Acetyl-CoA biotin carboxyl carrier; IMG reference gene:2503957877; PFAM: Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; acetyl-CoA carboxylase, biotin carboxyl carrier protein 1857878..1858378 Sphaerochaeta coccoides DSM 17374 10495888 YP_004412148.1 CDS Spico_1564 NC_015436.1 1858375 1859733 D COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit; InterPro IPR005481:IPR005479:IPR005482; KEGG: sta:STHERM_c08570 pyruvate carboxylase subunit A; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; PRIAM: Biotin carboxylase; SMART: Biotin carboxylase, C-terminal; SPTR: Pyruvate carboxylase subunit A; IMG reference gene:2503957878; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; biotin carboxylase 1858375..1859733 Sphaerochaeta coccoides DSM 17374 10495889 YP_004412149.1 CDS Spico_1565 NC_015436.1 1859726 1860562 D COGs: COG0777 Acetyl-CoA carboxylase beta subunit; HAMAP: Acetyl-CoA carboxylase carboxyl transferase, beta subunit; InterPro IPR000438:IPR000022; KEGG: ssm:Spirs_2294 acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: Carboxyl transferase; PRIAM: Acetyl-CoA carboxylase; SPTR: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; IMG reference gene:2503957879; PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; acetyl-CoA carboxylase carboxyltransferase subunit alpha 1859726..1860562 Sphaerochaeta coccoides DSM 17374 10495890 YP_004412150.1 CDS Spico_1566 NC_015436.1 1860555 1861517 D COGs: COG0825 Acetyl-CoA carboxylase alpha subunit; HAMAP: Acetyl-CoA carboxylase, alpha subunit; InterPro IPR001095; KEGG: tde:TDE0589 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: Acetyl-CoA carboxylase, alpha subunit; PRIAM: Acetyl-CoA carboxylase; SPTR: Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; TIGRFAM: Acetyl-CoA carboxylase, alpha subunit; IMG reference gene:2503957880; PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; acetyl-CoA carboxylase carboxyltransferase subunit alpha 1860555..1861517 Sphaerochaeta coccoides DSM 17374 10495891 YP_004412151.1 CDS Spico_1567 NC_015436.1 1861535 1863190 D COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR000873; KEGG: pdi:BDI_2255 acetyl-coenzyme A synthetase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Butyrate--CoA ligase; SPTR: uncharacterized protein; IMG reference gene:2503957881; PFAM: AMP-binding enzyme; butyrate--CoA ligase 1861535..1863190 Sphaerochaeta coccoides DSM 17374 10495892 YP_004412152.1 CDS Spico_1568 NC_015436.1 1863268 1863708 R COGs: COG5496 thioesterase; KEGG: cob:COB47_1987 thioesterase superfamily protein; SPTR: uncharacterized protein; IMG reference gene:2503957882; thioesterase complement(1863268..1863708) Sphaerochaeta coccoides DSM 17374 10495893 YP_004412153.1 CDS Spico_1569 NC_015436.1 1863830 1865083 D COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: cbe:Cbei_0707 major facilitator transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; IMG reference gene:2503957883; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein 1863830..1865083 Sphaerochaeta coccoides DSM 17374 10495894 YP_004412154.1 CDS Spico_1570 NC_015436.1 1865206 1865691 D COGs: COG2077 Peroxiredoxin; HAMAP: thiol peroxidase Tpx; InterPro IPR002065:IPR013740; KEGG: cbt:CLH_2671 thiol peroxidase; PFAM: Redoxin; SPTR: thiol peroxidase; IMG reference gene:2503957884; PFAM: Redoxin; thiol peroxidase 1865206..1865691 Sphaerochaeta coccoides DSM 17374 10495895 YP_004412155.1 CDS Spico_1571 NC_015436.1 1865729 1866103 R InterPro IPR013096; KEGG: sus:Acid_7125 cupin 2 domain-containing protein; PFAM: Cupin 2, conserved barrel; SPTR: uncharacterized protein; IMG reference gene:2503957885; PFAM: Cupin domain; cupin complement(1865729..1866103) Sphaerochaeta coccoides DSM 17374 10495896 YP_004412156.1 CDS Spico_1572 NC_015436.1 1866150 1868117 R COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR003953; KEGG: ske:Sked_06460 succinate dehydrogenase/fumarate reductase flavoprotein subunit; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; SPTR: uncharacterized protein; IMG reference gene:2503957886; PFAM: FAD binding domain; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein complement(1866150..1868117) Sphaerochaeta coccoides DSM 17374 10495897 YP_004412157.1 CDS Spico_1573 NC_015436.1 1868160 1868933 R COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198:IPR020842; KEGG: pac:PPA0372 3-ketoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SMART: Polyketide synthase/Fatty acid synthase, KR; SPTR: Short-chain dehydrogenase/reductase SDR; IMG reference gene:2503957887; PFAM: short chain dehydrogenase; 3-oxoacyl-ACP reductase complement(1868160..1868933) Sphaerochaeta coccoides DSM 17374 10495898 YP_004412158.1 CDS Spico_1574 NC_015436.1 1868995 1870374 R COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family; InterPro IPR001155; KEGG: trq:TRQ2_0516 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; SPTR: NADH:flavin oxidoreductase/NADH oxidase; IMG reference gene:2503957888; PFAM: NADH:flavin oxidoreductase / NADH oxidase; NADH:flavin oxidoreductase complement(1868995..1870374) Sphaerochaeta coccoides DSM 17374 10495899 YP_004412159.1 CDS Spico_1575 NC_015436.1 1870456 1871472 R COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: tmt:Tmath_0260 transcriptional regulator, LacI family; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI; SPTR: uncharacterized protein; IMG reference gene:2503957889; PFAM: Bacterial regulatory proteins, lacI family; family; LacI family transcriptional regulator complement(1870456..1871472) Sphaerochaeta coccoides DSM 17374 10495900 YP_004412160.1 CDS Spico_1576 NC_015436.1 1871528 1872232 R COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: cpy:Cphy_3532 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: uncharacterized protein; IMG reference gene:2503957890; PFAM: ABC transporter; amino acid ABC transporter ATP-binding protein complement(1871528..1872232) Sphaerochaeta coccoides DSM 17374 10495901 YP_004412161.1 CDS Spico_1577 NC_015436.1 1872234 1872992 R COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: dma:DMR_05820 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: uncharacterized protein; IMG reference gene:2503957891; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; amino acid ABC transporter ATP-binding protein complement(1872234..1872992) Sphaerochaeta coccoides DSM 17374 10495902 YP_004412162.1 CDS Spico_1578 NC_015436.1 1872985 1873866 R COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: amt:Amet_2076 inner-membrane translocator; PFAM: ABC transporter permease; SPTR: uncharacterized protein; IMG reference gene:2503957892; PFAM: Branched-chain amino acid transport system / permease component; inner-membrane translocator complement(1872985..1873866) Sphaerochaeta coccoides DSM 17374 10495903 YP_004412163.1 CDS Spico_1579 NC_015436.1 1873885 1874757 R COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: amt:Amet_2075 inner-membrane translocator; PFAM: ABC transporter permease; SPTR: uncharacterized protein; IMG reference gene:2503957893; PFAM: Branched-chain amino acid transport system / permease component; inner-membrane translocator complement(1873885..1874757) Sphaerochaeta coccoides DSM 17374 10495904 YP_004412164.1 CDS Spico_1580 NC_015436.1 1874863 1876026 R COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: amt:Amet_2074 extracellular ligand-binding receptor; PFAM: Extracellular ligand-binding receptor; SPTR: uncharacterized protein; IMG reference gene:2503957894; PFAM: Receptor family ligand binding region; ABC transporter substrate-binding protein complement(1874863..1876026) Sphaerochaeta coccoides DSM 17374 10495905 YP_004412165.1 CDS Spico_1581 NC_015436.1 1876288 1877115 R COGs: COG0656 Aldo/keto reductase related to diketogulonate reductase; InterPro IPR023210; KEGG: gtn:GTNG_0505 aldo/keto reductase oxidoreductase; PFAM: NADP-dependent oxidoreductase domain; PRIAM: Methylglyoxal reductase (NADPH-dependent); SPTR: 2,5-didehydrogluconate reductase; manually curated; IMG reference gene:2503957895; PFAM: Aldo/keto reductase; methylglyoxal reductase complement(1876288..1877115) Sphaerochaeta coccoides DSM 17374 10495906 YP_004412166.1 CDS Spico_1582 NC_015436.1 1877344 1878180 D COGs: COG1692 conserved hypothetical protein; KEGG: ssm:Spirs_4037 hypothetical protein; SPTR: Metallophosphoesterase; manually curated; IMG reference gene:2503957896; TIGRFAM: metallophosphoesterase, MG_246/BB_0505 family; hypothetical protein 1877344..1878180 Sphaerochaeta coccoides DSM 17374 10495907 YP_004412167.1 CDS Spico_1583 NC_015436.1 1878268 1878882 D InterPro IPR010664; KEGG: apb:SAR116_1245 hypothetical protein; PFAM: Lipopolysccharide assembly, LptC-related; SPTR: OstA family protein; IMG reference gene:2503957897; PFAM: Protein of unknown function (DUF1239); hypothetical protein 1878268..1878882 Sphaerochaeta coccoides DSM 17374 10495908 YP_004412168.1 CDS Spico_1584 NC_015436.1 1878879 1879514 D KEGG: ssm:Spirs_4046 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957898; PFAM: Protein of unknown function (DUF1239); hypothetical protein 1878879..1879514 Sphaerochaeta coccoides DSM 17374 10495909 YP_004412169.1 CDS Spico_1585 NC_015436.1 1879507 1880250 D COGs: COG1137 ABC-type (unclassified) transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: sta:STHERM_c21930 transporter; PFAM: ABC transporter-like; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Transporter; IMG reference gene:2503957899; PFAM: ABC transporter; Fe(3+)-transporting ATPase 1879507..1880250 Sphaerochaeta coccoides DSM 17374 10495910 YP_004412170.1 CDS Spico_1586 NC_015436.1 1880198 1881703 D COGs: COG1508 DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog; InterPro IPR000394:IPR007046:IPR007634; KEGG: ssm:Spirs_4048 RNA polymerase, sigma 54 subunit, RpoN; PFAM: RNA polymerase sigma factor 54, DNA-binding; RNA polymerase sigma factor 54, core-binding; RNA polymerase sigma factor 54; SPTR: RNA polymerase sigma-54 factor; TIGRFAM: RNA polymerase sigma factor 54; IMG reference gene:2503957900; PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54, DNA binding domain; Sigma-54 factor, core binding domain; TIGRFAM: RNA polymerase sigma-54 factor; RNA polymerase sigma 54 subunit RpoN 1880198..1881703 Sphaerochaeta coccoides DSM 17374 10495911 YP_004412171.1 CDS Spico_1587 NC_015436.1 1881865 1882161 D KEGG: ssm:Spirs_4049 ribosomal subunit interface protein; SPTR: uncharacterized protein; IMG reference gene:2503957901; PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein; ribosomal subunit interface protein 1881865..1882161 Sphaerochaeta coccoides DSM 17374 10495912 YP_004412172.1 CDS Spico_1588 NC_015436.1 1882307 1883284 D COGs: COG1493 Serine kinase of the HPr protein regulates carbohydrate metabolism; HAMAP: Signal transduction serine kinase/phosphorylase, HPr(Ser) kinase; InterPro IPR003755:IPR011126:IPR011104; KEGG: ssm:Spirs_4050 HPr kinase; PFAM: Signal transduction serine kinase/phosphorylase, HPr(Ser) kinase, C-terminal; Signal transduction serine kinase/phosphorylase, HPr(Ser) kinase, N-terminal; SPTR: HPr kinase; TIGRFAM: Signal transduction serine kinase/phosphorylase, HPr(Ser) kinase; IMG reference gene:2503957902; PFAM: HPr Serine kinase N terminus; HPr Serine kinase C-terminal domain; TIGRFAM: Hpr(Ser) kinase/phosphatase; Hpr(Ser) kinase/phosphatase 1882307..1883284 Sphaerochaeta coccoides DSM 17374 10495913 YP_004412173.1 CDS Spico_1589 NC_015436.1 1883284 1883547 D COGs: COG1925 Phosphotransferase system HPr-related protein; InterPro IPR005698; KEGG: ssm:Spirs_4051 phosphotransferase system, phosphocarrier protein HPr; PFAM: Phosphotransferase system, phosphocarrier HPr protein; SPTR: Phosphocarrier protein HPr; TIGRFAM: Phosphotransferase system, phosphocarrier HPr protein; IMG reference gene:2503957903; PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family; phosphotransferase system, phosphocarrier protein HPr 1883284..1883547 Sphaerochaeta coccoides DSM 17374 10495914 YP_004412174.1 CDS Spico_1590 NC_015436.1 1883560 1884189 D COGs: COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidase); HAMAP: Peptidase S24, LexA repressor; InterPro IPR006200:IPR006199:IPR019759; KEGG: ssm:Spirs_4055 transcriptional repressor, LexA family; PFAM: LexA, DNA-binding domain; Peptidase S24/S26A/S26B, conserved region; SPTR: Transcriptional repressor; TIGRFAM: Peptidase S24, LexA repressor; IMG reference gene:2503957904; PFAM: LexA DNA binding domain; Peptidase S24-like; TIGRFAM: SOS regulatory protein LexA; SOS-response transcriptional repressor, LexA 1883560..1884189 Sphaerochaeta coccoides DSM 17374 10495915 YP_004412175.1 CDS Spico_1591 NC_015436.1 1884186 1885256 D COGs: COG1466 DNA polymerase III delta subunit; InterPro IPR010372; KEGG: ssm:Spirs_4056 DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta; SPTR: uncharacterized protein; IMG reference gene:2503957905; PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; DNA polymerase III subunit delta 1884186..1885256 Sphaerochaeta coccoides DSM 17374 10495916 YP_004412176.1 CDS Spico_1592 NC_015436.1 1885323 1887158 R COGs: COG0322 Nuclease subunit of the excinuclease complex; HAMAP: Excinuclease ABC, C subunit; InterPro IPR004791:IPR000305:IPR001943:IPR001162; KEGG: ssm:Spirs_4068 excinuclease ABC, C subunit; PFAM: Excinuclease ABC, C subunit, C-terminal; Excinuclease ABC, C subunit, N-terminal; UvrB/UvrC protein; SMART: Excinuclease ABC, C subunit, N-terminal; SPTR: UvrABC system protein C; TIGRFAM: Excinuclease ABC, C subunit; IMG reference gene:2503957906; PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit; UvrABC system protein C complement(1885323..1887158) Sphaerochaeta coccoides DSM 17374 10495917 YP_004412177.1 CDS Spico_1593 NC_015436.1 1887547 1888518 D KEGG: sta:STHERM_c17700 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957907; hypothetical protein 1887547..1888518 Sphaerochaeta coccoides DSM 17374 10495918 YP_004412178.1 CDS Spico_1594 NC_015436.1 1888531 1889352 R COGs: COG1351 alternative thymidylate synthase; HAMAP: Thymidylate synthase ThyX; InterPro IPR003669; KEGG: sta:STHERM_c22080 hypothetical protein; PFAM: Thymidylate synthase ThyX; SPTR: uncharacterized protein; TIGRFAM: Thymidylate synthase ThyX; IMG reference gene:2503957908; PFAM: Thymidylate synthase complementing protein; TIGRFAM: thymidylate synthase, flavin-dependent; thymidylate synthase complement(1888531..1889352) Sphaerochaeta coccoides DSM 17374 10495919 YP_004412179.1 CDS Spico_1595 NC_015436.1 1889506 1890231 R COGs: COG1385 conserved hypothetical protein; InterPro IPR006700; KEGG: ssm:Spirs_4109 protein of unknown function DUF558; PFAM: Ribosomal RNA small subunit methyltransferase E; SPTR: uncharacterized protein; TIGRFAM: Ribosomal RNA small subunit methyltransferase E; IMG reference gene:2503957909; PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family; Ribosomal RNA small subunit methyltransferase E complement(1889506..1890231) Sphaerochaeta coccoides DSM 17374 10495920 YP_004412180.1 CDS Spico_1596 NC_015436.1 1890364 1891989 D COGs: COG4166 ABC-type oligopeptide transport system periplasmic component; InterPro IPR000914; KEGG: ssm:Spirs_4114 extracellular solute-binding protein family 5; PFAM: Bacterial extracellular solute-binding protein, family 5; SPTR: Bacterial extracellular solute-binding protein, family 5; IMG reference gene:2503957910; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; ABC transporter substrate-binding protein 1890364..1891989 Sphaerochaeta coccoides DSM 17374 10495921 YP_004412181.1 CDS Spico_1597 NC_015436.1 1891973 1893505 R COGs: COG1640 4-alpha-glucanotransferase; InterPro IPR003385; KEGG: ssm:Spirs_4115 4-alpha-glucanotransferase; PFAM: Glycoside hydrolase, family 77; PRIAM: 4-alpha-glucanotransferase; SPTR: 4-alpha-glucanotransferase; TIGRFAM: Glycoside hydrolase, family 77; IMG reference gene:2503957911; PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; 4-alpha-glucanotransferase complement(1891973..1893505) Sphaerochaeta coccoides DSM 17374 10495922 YP_004412182.1 CDS Spico_1598 NC_015436.1 1893619 1894104 D COGs: COG1329 Transcriptional regulators similar to M. xanthus CarD; InterPro IPR003711; KEGG: ssm:Spirs_4116 transcriptional regulator, CarD family; PFAM: Transcription factor CarD; SPTR: Transcriptional regulatory protein; IMG reference gene:2503957912; PFAM: CarD-like/TRCF domain; CarD family transcriptional regulator 1893619..1894104 Sphaerochaeta coccoides DSM 17374 10495923 YP_004412183.1 CDS Spico_1599 NC_015436.1 1894108 1894986 D COGs: COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase; InterPro IPR001228; KEGG: ssm:Spirs_4117 4-diphosphocytidyl-2C-methyl-D-erythritolsynthas E; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; SPTR: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; IMG reference gene:2503957913; PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase 1894108..1894986 Sphaerochaeta coccoides DSM 17374 10495924 YP_004412184.1 CDS Spico_1600 NC_015436.1 1894967 1895488 D COGs: COG0245 2C-methyl-D-erythritol 2 4-cyclodiphosphate synthase; HAMAP: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; InterPro IPR003526; KEGG: ssm:Spirs_4118 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; PRIAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; SPTR: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; IMG reference gene:2503957914; PFAM: YgbB family; TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase 1894967..1895488 Sphaerochaeta coccoides DSM 17374 10495925 YP_004412185.1 CDS Spico_1601 NC_015436.1 1895562 1896269 R KEGG: ssm:Spirs_4125 hypothetical protein; SPTR: cytoplasmic protein; IMG reference gene:2503957915; hypothetical protein complement(1895562..1896269) Sphaerochaeta coccoides DSM 17374 10495926 YP_004412186.1 CDS Spico_1603 NC_015436.1 1896861 1897250 D COGs: COG3943 Virulence protein; KEGG: clo:HMPREF0868_1371 hypothetical protein; SPTR: Toxin-antitoxin system, toxin component, Fic family; IMG reference gene:2503957917; hypothetical protein 1896861..1897250 Sphaerochaeta coccoides DSM 17374 10495928 YP_004412187.1 CDS Spico_1604 NC_015436.1 1897378 1899495 R COGs: COG0480 Translation elongation factors (GTPase); InterProIPR004540:IPR005225:IPR000795:IPR004161:IPR 005517:IPR000640; KEGG: ssm:Spirs_4126 translation elongation factor G; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; SMART: Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; SPTR: Translation elongation factor G; TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; IMG reference gene:2503957918; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; translation elongation factor 2 (EF-2/EF-G) complement(1897378..1899495) Sphaerochaeta coccoides DSM 17374 10495929 YP_004412188.1 CDS Spico_1605 NC_015436.1 1900021 1901358 D COGs: COG2233 Xanthine/uracil permease; InterPro IPR006043; KEGG: acl:ACL_1377 xanthine/uracil/vitamin C permease; PFAM: Xanthine/uracil/vitamin C permease; SPTR: Xanthine/uracil/vitamin C permease; IMG reference gene:2503957919; PFAM: Permease; TIGRFAM: uracil-xanthine permease; xanthine/uracil/vitamin C permease 1900021..1901358 Sphaerochaeta coccoides DSM 17374 10495930 YP_004412189.1 CDS Spico_1606 NC_015436.1 1901733 1902590 D InterPro IPR002864; KEGG: dvm:DvMF_1428 acyl-ACP thioesterase; PFAM: Acyl-ACP thioesterase; SPTR: Acyl-ACP thioesterase; IMG reference gene:2503957920; PFAM: Acyl-ACP thioesterase; acyl-ACP thioesterase 1901733..1902590 Sphaerochaeta coccoides DSM 17374 10495931 YP_004412190.1 CDS Spico_1607 NC_015436.1 1902886 1903773 D COGs: COG3588 Fructose-1 6-bisphosphate aldolase; InterPro IPR000741; KEGG: fjo:Fjoh_0953 fructose-1,6-bisphosphate aldolase; PFAM: Fructose-bisphosphate aldolase, class-I; SPTR: Fructose-bisphosphate aldolase class 1; IMG reference gene:2503957921; PFAM: Fructose-bisphosphate aldolase class-I; fructose-bisphosphate aldolase 1902886..1903773 Sphaerochaeta coccoides DSM 17374 10495932 YP_004412191.1 CDS Spico_1608 NC_015436.1 1904076 1906358 D COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; IMG reference gene:2503957922; PFAM: Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 1904076..1906358 Sphaerochaeta coccoides DSM 17374 10495933 YP_004412192.1 CDS Spico_1609 NC_015436.1 1906758 1907609 D COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: dfe:Dfer_5189 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; IMG reference gene:2503957923; PFAM: ABC transporter; ABC transporter 1906758..1907609 Sphaerochaeta coccoides DSM 17374 10495934 YP_004412193.1 CDS Spico_1610 NC_015436.1 1907606 1908382 D KEGG: ssm:Spirs_3164 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957924; hypothetical protein 1907606..1908382 Sphaerochaeta coccoides DSM 17374 10495935 YP_004412194.1 CDS Spico_1611 NC_015436.1 1908372 1908809 D COGs: COG1725 transcriptional regulator protein; InterPro IPR000524; KEGG: ssm:Spirs_3163 transcriptional regulator, GntR family; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; SPTR: GntR family transcriptional regulator; IMG reference gene:2503957925; PFAM: Bacterial regulatory proteins, gntR family; GntR family transcriptional regulator 1908372..1908809 Sphaerochaeta coccoides DSM 17374 10495936 YP_004412195.1 CDS Spico_1612 NC_015436.1 1908790 1908993 D IMG reference gene:2503957926; hypothetical protein 1908790..1908993 Sphaerochaeta coccoides DSM 17374 10495937 YP_004412196.1 CDS Spico_1613 NC_015436.1 1909053 1912325 R COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006104:IPR006102:IPR006103:IPR004199; KEGG: rca:Rcas_2493 beta-galactosidase; PFAM: Glycoside hydrolase, family 2, TIM barrel; Glycoside hydrolase, family 2, carbohydrate-binding; Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich; Glycoside hydrolase, family 42, domain 5; SPTR: Beta-galactosidase; IMG reference gene:2503957927; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Beta galactosidase small chain; Glycosyl hydrolases family 2, sugar binding domain; glycoside hydrolase 2 TIM barrel complement(1909053..1912325) Sphaerochaeta coccoides DSM 17374 10495938 YP_004412197.1 CDS Spico_1615 NC_015436.1 1912851 1913906 D COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase; InterPro IPR013154:IPR013149:IPR020843; KEGG: clo:HMPREF0868_1158 GroES-like protein; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; PRIAM: Alcohol dehydrogenase (NADP(+)); SMART: Polyketide synthase, enoylreductase; SPTR: uncharacterized protein; IMG reference gene:2503957929; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; alcohol dehydrogenase 1912851..1913906 Sphaerochaeta coccoides DSM 17374 10495940 YP_004412198.1 CDS Spico_1616 NC_015436.1 1913974 1914933 D COGs: COG0523 GTPase (G3E family); InterPro IPR003495; KEGG: apv:Apar_1227 cobalamin synthesis protein P47K; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; SPTR: CobW/P47K family protein; IMG reference gene:2503957930; PFAM: CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain; cobalamin synthesis protein P47K 1913974..1914933 Sphaerochaeta coccoides DSM 17374 10495941 YP_004412199.1 CDS Spico_1617 NC_015436.1 1915025 1916095 D COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR005786:IPR001544; KEGG: cac:CA_C1479 branched-chain amino acid aminotransferase; PFAM: Aminotransferase, class IV; PRIAM: Branched-chain-amino-acid transaminase; SPTR: Branched-chain amino acid aminotransferase, group II; TIGRFAM: Branched-chain amino acid aminotransferase II; IMG reference gene:2503957931; PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group II; branched-chain amino acid aminotransferase 1915025..1916095 Sphaerochaeta coccoides DSM 17374 10495942 YP_004412200.1 CDS Spico_1619 NC_015436.1 1917062 1917697 D InterPro IPR001647; KEGG: bha:BH0719 TetR/AcrR family transcriptional regulator; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator; IMG reference gene:2503957933; PFAM: Bacterial regulatory proteins, tetR family; TetR family transcriptional regulator 1917062..1917697 Sphaerochaeta coccoides DSM 17374 10495944 YP_004412201.1 CDS Spico_1620 NC_015436.1 1917725 1918915 R COGs: COG1171 Threonine dehydratase; InterPro IPR005789:IPR001926:IPR002912; KEGG: bvu:BVU_3892 threonine dehydratase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Amino acid-binding ACT; SPTR: uncharacterized protein; TIGRFAM: Threonine dehydratase II; IMG reference gene:2503957934; PFAM: ACT domain; Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine dehydratase, medium form; L-threonine ammonia-lyase complement(1917725..1918915) Sphaerochaeta coccoides DSM 17374 10495945 YP_004412202.1 CDS Spico_1621 NC_015436.1 1919433 1920107 D InterPro IPR002187; KEGG: chy:CHY_1194 PII family protein; SMART: Nitrogen regulatory protein PII; SPTR: Regulatory protein, P-II family; IMG reference gene:2503957935; nitrogen regulatory protein P-II 1919433..1920107 Sphaerochaeta coccoides DSM 17374 10495946 YP_004412203.1 CDS Spico_1622 NC_015436.1 1920196 1921176 D COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: tte:TTE0761 transcriptional regulator; PFAM: ROK; PRIAM: Glucokinase; SPTR: uncharacterized protein; IMG reference gene:2503957936; PFAM: ROK family; glucokinase 1920196..1921176 Sphaerochaeta coccoides DSM 17374 10495947 YP_004412204.1 CDS Spico_1623 NC_015436.1 1921178 1921822 D COGs: COG0279 Phosphoheptose isomerase; InterPro IPR001347; KEGG: csh:Closa_3796 sugar isomerase (SIS); PFAM: Sugar isomerase (SIS); SPTR: uncharacterized protein; IMG reference gene:2503957937; PFAM: SIS domain; sugar isomerase (SIS) 1921178..1921822 Sphaerochaeta coccoides DSM 17374 10495948 YP_004412205.1 CDS Spico_1624 NC_015436.1 1921849 1923477 D COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR001789:IPR000005:IPR018060; KEGG: ssm:Spirs_2649 two component transcriptional regulator, AraC family; PFAM: Signal transduction response regulator, receiver domain; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; Signal transduction response regulator, receiver domain; SPTR: Two component transcriptional regulator, AraC family; IMG reference gene:2503957938; PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator 1921849..1923477 Sphaerochaeta coccoides DSM 17374 10495949 YP_004412206.1 CDS Spico_1625 NC_015436.1 1923474 1924526 D COGs: COG2972 signal transduction protein with a C-terminal ATPase domain; InterPro IPR010559:IPR003594; KEGG: ssm:Spirs_2648 integral membrane sensor signal transduction histidine kinase; PFAM: Signal transduction histidine kinase, internal region; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; SPTR: uncharacterized protein; IMG reference gene:2503957939; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; integral membrane sensor signal transduction histidine kinase 1923474..1924526 Sphaerochaeta coccoides DSM 17374 10495950 YP_004412207.1 CDS Spico_1626 NC_015436.1 1924523 1926004 D COGs: COG1129 ABC-type sugar transport system ATPase component; KEGG: ssm:Spirs_2647 monosaccharide-transporting ATPase; SPTR: uncharacterized protein; IMG reference gene:2503957940; monosaccharide-transporting ATPase 1924523..1926004 Sphaerochaeta coccoides DSM 17374 10495951 YP_004412208.1 CDS Spico_1627 NC_015436.1 1926159 1927670 D COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: ssm:Spirs_2646 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: uncharacterized protein; IMG reference gene:2503957941; PFAM: ABC transporter; monosaccharide ABC transporter ATP-binding protein, CUT2 family 1926159..1927670 Sphaerochaeta coccoides DSM 17374 10495952 YP_004412209.1 CDS Spico_1628 NC_015436.1 1927691 1928713 D COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: ssm:Spirs_2645 inner-membrane translocator; PFAM: ABC transporter permease; SPTR: Inner-membrane translocator; IMG reference gene:2503957942; PFAM: Branched-chain amino acid transport system / permease component; monosaccharide ABC transporter membrane protein, CUT2 family 1927691..1928713 Sphaerochaeta coccoides DSM 17374 10495953 YP_004412210.1 CDS Spico_1629 NC_015436.1 1928762 1929688 D COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR001761; KEGG: ssm:Spirs_2644 periplasmic binding protein/LacI transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; SPTR: Periplasmic binding protein/LacI transcriptional regulator; IMG reference gene:2503957943; PFAM: family; monosaccharide ABC transporter substrate-binding protein, CUT2 family 1928762..1929688 Sphaerochaeta coccoides DSM 17374 10495954 YP_004412211.1 CDS Spico_1630 NC_015436.1 1929864 1930574 D InterPro IPR001087; KEGG: bld:BLi04100 hypothetical protein; PFAM: Lipase, GDSL; SPTR: uncharacterized protein; IMG reference gene:2503957944; PFAM: GDSL-like Lipase/Acylhydrolase; G-D-S-L family lipolytic protein 1929864..1930574 Sphaerochaeta coccoides DSM 17374 10495955 YP_004412212.1 CDS Spico_1631 NC_015436.1 1930658 1931284 D COGs: COG0406 Fructose-2 6-bisphosphatase; InterPro IPR013078; KEGG: ssm:Spirs_1093 phosphoglycerate mutase; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1; SPTR: Alpha-ribazole-5-phosphate phosphatase; IMG reference gene:2503957945; PFAM: Phosphoglycerate mutase; phosphoglycerate mutase 1930658..1931284 Sphaerochaeta coccoides DSM 17374 10495956 YP_004412213.1 CDS Spico_1632 NC_015436.1 1931368 1932315 D COGs: COG4866 conserved hypothetical protein; KEGG: sta:STHERM_c02850 ABC transporter permease; SPTR: ABC transporter, permease; IMG reference gene:2503957946; PFAM: Uncharacterized conserved protein (DUF2156); ABC transporter permease 1931368..1932315 Sphaerochaeta coccoides DSM 17374 10495957 YP_004412214.1 CDS Spico_1634 NC_015436.1 1933313 1934827 D InterPro IPR000073; KEGG: kko:Kkor_1814 alpha/beta hydrolase fold protein; PFAM: Alpha/beta hydrolase fold-1; SPTR: Hydrolase, alpha/beta domain protein; IMG reference gene:2503957948; PFAM: X-Pro dipeptidyl-peptidase (S15 family); alpha/beta hydrolase 1933313..1934827 Sphaerochaeta coccoides DSM 17374 10495959 YP_004412215.1 CDS Spico_1635 NC_015436.1 1934932 1935783 D COGs: COG1387 Histidinol phosphatase and related hydrolase of the PHP family; InterPro IPR010140:IPR004013; KEGG: ssm:Spirs_0453 histidinol phosphate phosphatase HisJ family; PFAM: PHP, C-terminal; SPTR: Probable histidinol-phosphatase; TIGRFAM: Histidinol phosphate phosphatase, HisJ; IMG reference gene:2503957949; PFAM: PHP domain; TIGRFAM: histidinol phosphate phosphatase HisJ family; HisJ family histidinol phosphate phosphatase 1934932..1935783 Sphaerochaeta coccoides DSM 17374 10495960 YP_004412216.1 CDS Spico_1636 NC_015436.1 1935981 1936733 D COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: hor:Hore_14700 transcriptional regulator, TetR family; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family; IMG reference gene:2503957950; PFAM: Bacterial regulatory proteins, tetR family; TetR family transcriptional regulator 1935981..1936733 Sphaerochaeta coccoides DSM 17374 10495961 YP_004412217.1 CDS Spico_1637 NC_015436.1 1936717 1939329 D COGs: COG0474 Cation transport ATPase; InterProIPR006408:IPR001757:IPR004014:IPR008250:IPR 005834:IPR006068; KEGG: swo:Swol_0623 cation transporting ATPase-like protein; PFAM: ATPase, P-type, ATPase-associated domain; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal; PRIAM: Calcium-transporting ATPase; SMART: ATPase, P-type cation-transporter, N-terminal; SPTR: Cation transporting ATPase-like protein; TIGRFAM: ATPase, P-type, calcium-transporting, PMCA-type; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; IMG reference gene:2503957951; PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; calcium-translocating P-type ATPase 1936717..1939329 Sphaerochaeta coccoides DSM 17374 10495962 YP_004412218.1 CDS Spico_1638 NC_015436.1 1939429 1939920 R KEGG: fjo:Fjoh_3952 hypothetical protein; SPTR: Conserved repeat domain protein; IMG reference gene:2503957952; hypothetical protein complement(1939429..1939920) Sphaerochaeta coccoides DSM 17374 10495963 YP_004412219.1 CDS Spico_1639 NC_015436.1 1939920 1941578 R KEGG: bfr:BF3846 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957953; hypothetical protein complement(1939920..1941578) Sphaerochaeta coccoides DSM 17374 10495964 YP_004412220.1 CDS Spico_1640 NC_015436.1 1941793 1942803 R KEGG: bfr:BF3847 hypothetical protein; SPTR: lipoprotein; IMG reference gene:2503957954; hypothetical protein complement(1941793..1942803) Sphaerochaeta coccoides DSM 17374 10495965 YP_004412221.1 CDS Spico_1641 NC_015436.1 1943263 1945068 D COGs: COG5421 Transposase; InterPro IPR002559; KEGG: cob:COB47_1677 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; IMG reference gene:2503957955; PFAM: Transposase DDE domain; transposase IS4 family protein 1943263..1945068 Sphaerochaeta coccoides DSM 17374 10495966 YP_004412222.1 CDS Spico_1642 NC_015436.1 1945485 1947071 D COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792; KEGG: ssm:Spirs_3043 transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; SPTR: two-component response regulator; membrane protein; signal peptide; IMG reference gene:2503957956; PFAM: Bacterial regulatory proteins, luxR family; LuxR family transcriptional regulator 1945485..1947071 Sphaerochaeta coccoides DSM 17374 10495967 YP_004412223.1 CDS Spico_1643 NC_015436.1 1947154 1948110 R COGs: COG0039 Malate/lactate dehydrogenase; HAMAP: L-lactate dehydrogenase; InterPro IPR011304:IPR001236:IPR022383; KEGG: cth:Cthe_0345 malate dehydrogenase (NAD); PFAM: Lactate/malate dehydrogenase, N-terminal; Lactate/malate dehydrogenase, C-terminal; PRIAM: L-lactate dehydrogenase; SPTR: L-lactate dehydrogenase; TIGRFAM: L-lactate dehydrogenase; IMG reference gene:2503957957; PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: L-lactate dehydrogenase; L-lactate dehydrogenase complement(1947154..1948110) Sphaerochaeta coccoides DSM 17374 10495968 YP_004412224.1 CDS Spico_1644 NC_015436.1 1948495 1949589 R COGs: COG1879 ABC-type sugar transport system periplasmic component; KEGG: cpy:Cphy_2012 periplasmic binding protein/LacI transcriptional regulator; SPTR: uncharacterized protein; IMG reference gene:2503957958; periplasmic binding protein/LacI transcriptional regulator complement(1948495..1949589) Sphaerochaeta coccoides DSM 17374 10495969 YP_004412225.1 CDS Spico_1645 NC_015436.1 1949653 1950885 R COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: cpy:Cphy_2011 monosaccharide-transporting ATPase; PFAM: ABC transporter permease; SPTR: Inner-membrane translocator; IMG reference gene:2503957959; PFAM: Branched-chain amino acid transport system / permease component; monosaccharide ABC transporter membrane protein, CUT2 family complement(1949653..1950885) Sphaerochaeta coccoides DSM 17374 10495970 YP_004412226.1 CDS Spico_1646 NC_015436.1 1950966 1952465 R COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: cpy:Cphy_2010 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: uncharacterized protein; IMG reference gene:2503957960; PFAM: ABC transporter; monosaccharide ABC transporter ATP-binding protein, CUT2 family complement(1950966..1952465) Sphaerochaeta coccoides DSM 17374 10495971 YP_004412227.1 CDS Spico_1647 NC_015436.1 1952601 1954043 R COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484; KEGG: gym:GYMC10_3922 carbohydrate kinase, FGGY-like protein; PFAM: Carbohydrate kinase, FGGY, N-terminal; PRIAM: Rhamnulokinase; SPTR: Carbohydrate kinase, FGGY-like protein; IMG reference gene:2503957961; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; Rhamnulokinase complement(1952601..1954043) Sphaerochaeta coccoides DSM 17374 10495972 YP_004412228.1 CDS Spico_1648 NC_015436.1 1954170 1955435 R COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase; InterPro IPR013154:IPR013149; KEGG: csc:Csac_0869 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; SPTR: Alcohol dehydrogenase, zinc-binding domain protein; IMG reference gene:2503957962; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; alcohol dehydrogenase complement(1954170..1955435) Sphaerochaeta coccoides DSM 17374 10495973 YP_004412229.1 CDS Spico_1649 NC_015436.1 1955461 1956660 R COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: sta:STHERM_c08270 hypothetical protein; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: uncharacterized protein; IMG reference gene:2503957963; PFAM: short chain dehydrogenase; 3-oxoacyl-ACP reductase complement(1955461..1956660) Sphaerochaeta coccoides DSM 17374 10495974 YP_004412230.1 CDS Spico_1650 NC_015436.1 1956743 1958089 R KEGG: sta:STHERM_c08260 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957964; hypothetical protein complement(1956743..1958089) Sphaerochaeta coccoides DSM 17374 10495975 YP_004412231.1 CDS Spico_1651 NC_015436.1 1958125 1960581 R COGs: COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit; InterPro IPR001017:IPR005475:IPR005476; KEGG: sta:STHERM_c08250 dehydrogenase, fusion; PFAM: Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component; Transketolase, C-terminal; PRIAM: Pyruvate dehydrogenase (acetyl-transferring); SMART: Transketolase-like, pyrimidine-binding domain; SPTR: dehydrogenase, fusion; IMG reference gene:2503957965; PFAM: Dehydrogenase E1 component; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; pyruvate dehydrogenase complement(1958125..1960581) Sphaerochaeta coccoides DSM 17374 10495976 YP_004412232.1 CDS Spico_1652 NC_015436.1 1960720 1962072 R COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR006258:IPR013027:IPR004099; KEGG: csc:Csac_0873 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; PRIAM: Dihydrolipoyl dehydrogenase; SPTR: Dihydrolipoyl dehydrogenase; TIGRFAM: Dihydrolipoamide dehydrogenase; IMG reference gene:2503957966; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase complement(1960720..1962072) Sphaerochaeta coccoides DSM 17374 10495977 YP_004412233.1 CDS Spico_1653 NC_015436.1 1962084 1963520 R COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterPro IPR000089:IPR004167:IPR001078; KEGG: csc:Csac_0872 dehydrogenase catalytic domain-containing protein; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; PRIAM: Dihydrolipoyllysine-residue acetyltransferase; SPTR: uncharacterized protein; IMG reference gene:2503957967; PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; Dihydrolipoyllysine-residue acetyltransferase complement(1962084..1963520) Sphaerochaeta coccoides DSM 17374 10495978 YP_004412234.1 CDS Spico_1654 NC_015436.1 1963568 1964323 R COGs: COG1349 Transcriptional regulators of sugar metabolism; InterPro IPR001034:IPR014036; KEGG: sta:STHERM_c08230 transcriptional regulatory protein; PFAM: HTH transcriptional regulator, DeoR; HTH transcriptional regulator, DeoR N-terminal; SMART: HTH transcriptional regulator, DeoR N-terminal; SPTR: Transcriptional regulatory protein; IMG reference gene:2503957968; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain; DeoR family transcriptional regulator complement(1963568..1964323) Sphaerochaeta coccoides DSM 17374 10495979 YP_004412235.1 CDS Spico_1655 NC_015436.1 1964625 1964939 R COGs: COG3254 conserved hypothetical protein; InterPro IPR013448:IPR008000; KEGG: bth:BT_4177 hypothetical protein; PFAM: Rhamnose mutarotase; SPTR: uncharacterized protein; TIGRFAM: L-rhamnose 1-epimerase; IMG reference gene:2503957969; PFAM: Domain of unknown function (DUF718); TIGRFAM: L-rhamnose 1-epimerase; L-rhamnose 1-epimerase complement(1964625..1964939) Sphaerochaeta coccoides DSM 17374 10495980 YP_004412236.1 CDS Spico_1656 NC_015436.1 1964939 1966027 R COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: sta:STHERM_c08350 transporter; PFAM: ABC transporter permease; SPTR: Transporter; IMG reference gene:2503957970; PFAM: Branched-chain amino acid transport system / permease component; inner-membrane translocator complement(1964939..1966027) Sphaerochaeta coccoides DSM 17374 10495981 YP_004412237.1 CDS Spico_1657 NC_015436.1 1966024 1967043 R COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: oan:Oant_3568 monosaccharide-transporting ATPase; PFAM: ABC transporter permease; SPTR: Monosaccharide-transporting ATPase; IMG reference gene:2503957971; PFAM: Branched-chain amino acid transport system / permease component; inner-membrane translocator complement(1966024..1967043) Sphaerochaeta coccoides DSM 17374 10495982 YP_004412238.1 CDS Spico_1658 NC_015436.1 1967040 1968548 R COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: sta:STHERM_c08330 ribose/galactose/methyl galactoside import ATP-bindingprotein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ribose/galactose/methyl galactoside import ATP-bindingprotein; IMG reference gene:2503957972; PFAM: ABC transporter; monosaccharide-transporting ATPase complement(1967040..1968548) Sphaerochaeta coccoides DSM 17374 10495983 YP_004412239.1 CDS Spico_1659 NC_015436.1 1968681 1969685 R COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR013459; KEGG: sta:STHERM_c08320 transporter; SPTR: Transporter; TIGRFAM: Rhamnose ABC transporter, rhamnose-binding; IMG reference gene:2503957973; PFAM: family; TIGRFAM: rhamnose ABC transporter, rhamnose-binding protein; rhamnose-binding protein complement(1968681..1969685) Sphaerochaeta coccoides DSM 17374 10495984 YP_004412240.1 CDS Spico_1660 NC_015436.1 1969786 1970895 R COGs: COG3347 conserved hypothetical protein; InterPro IPR001303; KEGG: sta:STHERM_c08370 short chain dehydrogenase; PFAM: Class II aldolase/adducin, N-terminal; SPTR: Uncharacterized conserved protein; IMG reference gene:2503957974; PFAM: Class II Aldolase and Adducin N-terminal domain; class II aldolase/adducin family protein complement(1969786..1970895) Sphaerochaeta coccoides DSM 17374 10495985 YP_004412241.1 CDS Spico_1661 NC_015436.1 1970895 1972151 R COGs: COG4806 L-rhamnose isomerase; InterPro IPR009308; KEGG: csc:Csac_0876 L-rhamnose isomerase; PFAM: Rhamnose isomerase; PRIAM: L-rhamnose isomerase; SPTR: L-rhamnose isomerase; IMG reference gene:2503957975; PFAM: L-rhamnose isomerase (RhaA); TIGRFAM: L-rhamnose isomerase; L-rhamnose isomerase complement(1970895..1972151) Sphaerochaeta coccoides DSM 17374 10495986 YP_004412242.1 CDS Spico_1662 NC_015436.1 1972296 1973165 D COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR003313:IPR000005:IPR018060; KEGG: rba:RB680 L-rhamnose operon transcriptional activator; PFAM: HTH transcriptional regulator, AraC; HTH transcriptional regulator, AraC, arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator, AraC family; IMG reference gene:2503957976; PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator 1972296..1973165 Sphaerochaeta coccoides DSM 17374 10495987 YP_004412243.1 CDS Spico_1663 NC_015436.1 1973134 1974258 R COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: smd:Smed_4315 periplasmic binding protein/LacI transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI; SPTR: Periplasmic binding protein/LacI transcriptional regulator; IMG reference gene:2503957977; PFAM: Bacterial regulatory proteins, lacI family; family; LacI family transcriptional regulator complement(1973134..1974258) Sphaerochaeta coccoides DSM 17374 10495988 YP_004412244.1 CDS Spico_1664 NC_015436.1 1974300 1974719 R COGs: COG4154 Fucose dissimilation pathway protein FucU; InterPro IPR007721; KEGG: pjd:Pjdr2_1349 RbsD or FucU transport; PFAM: D-ribose pyranase RbsD/L-fucose mutarotase FucU; SPTR: Fucose operon protein FucU; IMG reference gene:2503957978; PFAM: RbsD / FucU transport protein family; transport protein RbsD/FucU complement(1974300..1974719) Sphaerochaeta coccoides DSM 17374 10495989 YP_004412245.1 CDS Spico_1665 NC_015436.1 1974873 1976684 D COGs: COG2407 L-fucose isomerase and related protein; HAMAP: L-fucose isomerase; InterPro IPR005763:IPR012888:IPR012889:IPR015888; KEGG: gym:GYMC10_3924 L-fucose isomerase; PFAM: L-fucose isomerase-like, C-terminal; L-fucose isomerase, N-terminal-1; L-fucose isomerase, N-terminal-2; PRIAM: L-fucose isomerase; SPTR: L-fucose isomerase; TIGRFAM: L-fucose isomerase; IMG reference gene:2503957979; PFAM: L-fucose isomerase, C-terminal domain; L-fucose isomerase, first N-terminal domain; L-fucose isomerase, second N-terminal domain; TIGRFAM: L-fucose isomerase; L-fucose isomerase 1974873..1976684 Sphaerochaeta coccoides DSM 17374 10495990 YP_004412246.1 CDS Spico_1666 NC_015436.1 1976918 1978105 D COGs: COG0738 Fucose permease; InterPro IPR011701; KEGG: gym:GYMC10_2567 major facilitator superfamily MFS_1; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; IMG reference gene:2503957980; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein 1976918..1978105 Sphaerochaeta coccoides DSM 17374 10495991 YP_004412247.1 CDS Spico_1667 NC_015436.1 1978157 1978555 R KEGG: sta:STHERM_c21820 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957981; PFAM: Protein of unknown function (DUF1312); hypothetical protein complement(1978157..1978555) Sphaerochaeta coccoides DSM 17374 10495992 YP_004412248.1 CDS Spico_1668 NC_015436.1 1978592 1979590 R COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127; KEGG: ccu:Ccur_04310 ABC-type metal ion transport system, periplasmic component/surface adhesin; PFAM: ABC transporter metal-binding lipoprotein; SPTR: Zinc ABC transporter, zinc-binding protein AdcA; IMG reference gene:2503957982; PFAM: Periplasmic solute binding protein family; periplasmic solute binding protein complement(1978592..1979590) Sphaerochaeta coccoides DSM 17374 10495993 YP_004412249.1 CDS Spico_1669 NC_015436.1 1980112 1980588 R KEGG: ssm:Spirs_0502 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957983; hypothetical protein complement(1980112..1980588) Sphaerochaeta coccoides DSM 17374 10495994 YP_004412250.1 CDS Spico_1670 NC_015436.1 1980585 1981697 R COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: aco:Amico_0360 inner-membrane translocator; PFAM: ABC transporter permease; SPTR: Inner-membrane translocator; IMG reference gene:2503957984; PFAM: Branched-chain amino acid transport system / permease component; monosaccharide ABC transporter membrane protein, CUT2 family complement(1980585..1981697) Sphaerochaeta coccoides DSM 17374 10495995 YP_004412251.1 CDS Spico_1671 NC_015436.1 1981694 1982821 R COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: ssm:Spirs_0504 inner-membrane translocator; PFAM: ABC transporter permease; SPTR: uncharacterized protein; IMG reference gene:2503957985; PFAM: Branched-chain amino acid transport system / permease component; monosaccharide ABC transporter membrane protein, CUT2 family complement(1981694..1982821) Sphaerochaeta coccoides DSM 17374 10495996 YP_004412252.1 CDS Spico_1672 NC_015436.1 1982818 1984443 R COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: ssm:Spirs_0505 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: uncharacterized protein; IMG reference gene:2503957986; PFAM: ABC transporter; monosaccharide ABC transporter ATP-binding protein, CUT2 family complement(1982818..1984443) Sphaerochaeta coccoides DSM 17374 10495997 YP_004412253.1 CDS Spico_1673 NC_015436.1 1984636 1985856 R KEGG: ssm:Spirs_0506 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957987; hypothetical protein complement(1984636..1985856) Sphaerochaeta coccoides DSM 17374 10495998 YP_004412254.1 CDS Spico_1674 NC_015436.1 1986205 1986822 D KEGG: cco:CCC13826_0601 outer membrane protein; SPTR: outer membrane protein; IMG reference gene:2503957988; hypothetical protein 1986205..1986822 Sphaerochaeta coccoides DSM 17374 10495999 YP_004412255.1 CDS Spico_1675 NC_015436.1 1986855 1987001 D IMG reference gene:2503957989; hypothetical protein 1986855..1987001 Sphaerochaeta coccoides DSM 17374 10496000 YP_004412256.1 CDS Spico_1676 NC_015436.1 1986940 1987716 R COGs: COG0566 rRNA methylase; InterPro IPR004441:IPR013123:IPR001537; KEGG: ssm:Spirs_3194 RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; SMART: RNA 2-O ribose methyltransferase, substrate binding; SPTR: rRNA methylase; TIGRFAM: RNA methyltransferase TrmH, group 3; IMG reference gene:2503957990; PFAM: SpoU rRNA Methylase; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, , group 3; TrmH family RNA methyltransferase complement(1986940..1987716) Sphaerochaeta coccoides DSM 17374 10496001 YP_004412257.1 CDS Spico_1677 NC_015436.1 1987719 1988855 R COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; HAMAP: Chaperone DnaJ; InterPro IPR012724:IPR001623:IPR001305:IPR002939; KEGG: ssm:Spirs_3197 chaperone protein DnaJ; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; Heat shock protein DnaJ, cysteine-rich domain; SMART: Heat shock protein DnaJ, N-terminal; SPTR: Chaperone protein DnaJ; TIGRFAM: Chaperone DnaJ; IMG reference gene:2503957991; PFAM: DnaJ C terminal region; DnaJ domain; DnaJ central domain (4 repeats); TIGRFAM: chaperone protein DnaJ; molecular chaperone DnaJ complement(1987719..1988855) Sphaerochaeta coccoides DSM 17374 10496002 YP_004412258.1 CDS Spico_1678 NC_015436.1 1988935 1990863 R COGs: COG0443 Molecular chaperone; HAMAP: Chaperone DnaK; InterPro IPR012725:IPR013126; KEGG: ssm:Spirs_3198 chaperone protein DnaK; PFAM: Heat shock protein 70; SPTR: Chaperone protein dnaK; TIGRFAM: Chaperone DnaK; IMG reference gene:2503957992; PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK; molecular chaperone DnaK complement(1988935..1990863) Sphaerochaeta coccoides DSM 17374 10496003 YP_004412259.1 CDS Spico_1679 NC_015436.1 1990919 1991545 R COGs: COG0576 Molecular chaperone GrpE (heat shock protein); HAMAP: GrpE nucleotide exchange factor; InterPro IPR000740; KEGG: ssm:Spirs_3199 GrpE protein; PFAM: GrpE nucleotide exchange factor; SPTR: Protein grpE; IMG reference gene:2503957993; PFAM: GrpE; protein grpE complement(1990919..1991545) Sphaerochaeta coccoides DSM 17374 10496004 YP_004412260.1 CDS Spico_1680 NC_015436.1 1992012 1993469 D COGs: COG0281 Malic enzyme; InterPro IPR012301:IPR012302; KEGG: tde:TDE2446 malate dehydrogenase; PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; PRIAM: Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)); SMART: Malic enzyme, NAD-binding; SPTR: Malate dehydrogenase; IMG reference gene:2503957994; PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain; malate dehydrogenase 1992012..1993469 Sphaerochaeta coccoides DSM 17374 10496005 YP_004412261.1 CDS Spico_1681 NC_015436.1 1993585 1997184 R InterPro IPR011493; KEGG: azl:AZL_e00660 filamentous haemagglutinin outer membrane protein; SPTR: Filamentous haemagglutinin outer membrane protein; IMG reference gene:2503957995; PFAM: The GLUG motif; hypothetical protein complement(1993585..1997184) Sphaerochaeta coccoides DSM 17374 10496006 YP_004412262.1 CDS Spico_1682 NC_015436.1 1997671 1998777 R KEGG: nvi:100119134 similar to conserved hypothetical protein; SPTR: GL17626; IMG reference gene:2503957996; hypothetical protein complement(1997671..1998777) Sphaerochaeta coccoides DSM 17374 10496007 YP_004412263.1 CDS Spico_1683 NC_015436.1 1998807 1999535 R COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005834; KEGG: ssm:Spirs_3201 haloacid dehalogenase domain protein hydrolase; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: hydrolase of the HAD superfamily; IMG reference gene:2503957997; PFAM: haloacid dehalogenase-like hydrolase; haloacid dehalogenase complement(1998807..1999535) Sphaerochaeta coccoides DSM 17374 10496008 YP_004412264.1 CDS Spico_1684 NC_015436.1 1999539 2001182 R COGs: COG1160 GTPase; HAMAP: GTP-binding, EngA; InterPro IPR016484:IPR005225:IPR002917; KEGG: ssm:Spirs_3209 ribosome-associated GTPase EngA; PFAM: GTP-binding protein, HSR1-related; SPTR: GTP-binding protein EngA; TIGRFAM: GTP-binding, EngA; Small GTP-binding protein; IMG reference gene:2503957998; PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain; GTP-binding protein engA complement(1999539..2001182) Sphaerochaeta coccoides DSM 17374 10496009 YP_004412265.1 CDS Spico_1685 NC_015436.1 2001163 2002929 R COGs: COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component); InterPro IPR006318:IPR008731:IPR008279:IPR000121; KEGG: ssm:Spirs_3210 phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilising enzyme; Phosphotransferase system, PEP-utilising enzyme, N-terminal; PEP-utilising enzyme, mobile domain; PRIAM: Phosphoenolpyruvate--protein phosphotransferase; SPTR: Phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: Phosphoenolpyruvate-protein phosphotransferase; IMG reference gene:2503957999; PFAM: PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; phosphoenolpyruvate-protein phosphotransferase complement(2001163..2002929) Sphaerochaeta coccoides DSM 17374 10496010 YP_004412266.1 CDS Spico_1686 NC_015436.1 2003136 2003771 D InterPro IPR019606; KEGG: sti:Sthe_0621 spore germination protein-like protein; PFAM: GerMN domain; SMART: GerMN domain; SPTR: uncharacterized protein; IMG reference gene:2503958000; PFAM: Sporulation and spore germination; lipoprotein LpqB 2003136..2003771 Sphaerochaeta coccoides DSM 17374 10496011 YP_004412267.1 CDS Spico_1687 NC_015436.1 2003846 2004628 R COGs: COG1189 rRNA methylase; InterPro IPR004538:IPR002877; KEGG: sta:STHERM_c13010 hemolysin; PFAM: Ribosomal RNA methyltransferase RrmJ/FtsJ; SPTR: Hemolysin; TIGRFAM: Haemolysin A; IMG reference gene:2503958001; PFAM: FtsJ-like methyltransferase; TIGRFAM: hemolysin TlyA family protein; hemolysin A complement(2003846..2004628) Sphaerochaeta coccoides DSM 17374 10496012 YP_004412268.1 CDS Spico_1688 NC_015436.1 2004632 2005432 R COGs: COG1692 conserved hypothetical protein; InterPro IPR005235:IPR004843; KEGG: ssm:Spirs_3213 Ser/Thr protein phosphatase; PFAM: Metallo-dependent phosphatase; SPTR: uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP00282; IMG reference gene:2503958002; TIGRFAM: metallophosphoesterase, MG_246/BB_0505 family; hypothetical protein complement(2004632..2005432) Sphaerochaeta coccoides DSM 17374 10496013 YP_004412269.1 CDS Spico_1689 NC_015436.1 2005457 2006989 R COGs: COG1418 HD superfamily hydrolase; HAMAP: 2',3'-cyclic-nucleotide 2'-phosphodiesterase; InterProIPR017705:IPR006675:IPR018111:IPR006674:IPR 004087:IPR003607; KEGG: ssm:Spirs_3214 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; K Homology, type 1, subgroup; SMART: Metal-dependent phosphohydrolase, HD domain; K Homology; SPTR: 2',3'-cyclic-nucleotide 2'-phosphodiesterase; TIGRFAM: 2',3'-cyclic-nucleotide 2'-phosphodiesterase; Uncharacterised protein family HDIG; IMG reference gene:2503958003; PFAM: KH domain; HD domain; Domain of unknown function (DUF3552); TIGRFAM: conserved hypothetical protein YmdA/YtgF; uncharacterized domain HDIG; 2,3 cyclic-nucleotide 2-phosphodiesterase complement(2005457..2006989) Sphaerochaeta coccoides DSM 17374 10496014 YP_004412270.1 CDS Spico_1690 NC_015436.1 2007350 2007865 R COGs: COG0203 Ribosomal protein L17; HAMAP: Ribosomal protein L17; InterPro IPR000456; KEGG: ssm:Spirs_0981 ribosomal protein L17; PFAM: Ribosomal protein L17; SPTR: 50S ribosomal protein L17; TIGRFAM: Ribosomal protein L17; IMG reference gene:2503958004; PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17; 50S ribosomal protein L17 complement(2007350..2007865) Sphaerochaeta coccoides DSM 17374 10496015 YP_004412271.1 CDS Spico_1691 NC_015436.1 2007855 2008907 R COGs: COG0202 DNA-directed RNA polymerase alpha subunit/40 kD subunit; HAMAP: DNA-directed RNA polymerase, alpha subunit; InterProIPR011773:IPR011261:IPR011262:IPR011260:IPR 011263; KEGG: ssm:Spirs_0980 DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase, alpha subunit, C-terminal; DNA-directed RNA polymerase, insert domain; DNA-directed RNA polymerase, dimerisation; SMART: DNA-directed RNA polymerase, RpoA/D/Rpb3-type; SPTR: uncharacterized protein; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; IMG reference gene:2503958005; PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type; DNA-directed RNA polymerase subunit alpha complement(2007855..2008907) Sphaerochaeta coccoides DSM 17374 10496016 YP_004412272.1 CDS Spico_1692 NC_015436.1 2008917 2009564 R COGs: COG0522 Ribosomal protein S4 and related protein; InterPro IPR005709:IPR001912:IPR002942:IPR000253; KEGG: ssm:Spirs_0979 ribosomal protein S4; PFAM: RNA-binding S4; Ribosomal protein S4/S9, N-terminal; Forkhead-associated (FHA) domain; SMART: RNA-binding S4; SPTR: 30S ribosomal protein S4; TIGRFAM: Ribosomal protein S4, bacterial-type; IMG reference gene:2503958006; PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type; 30S ribosomal protein S4 complement(2008917..2009564) Sphaerochaeta coccoides DSM 17374 10496017 YP_004412273.1 CDS Spico_1693 NC_015436.1 2009588 2009965 R COGs: COG0100 Ribosomal protein S11; InterPro IPR019981:IPR001971; KEGG: ssm:Spirs_0978 30S ribosomal protein S11; PFAM: Ribosomal protein S11; SPTR: 30S ribosomal protein S11; TIGRFAM: Ribosomal protein S11, bacterial-type; IMG reference gene:2503958007; PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; 30S ribosomal protein S11 complement(2009588..2009965) Sphaerochaeta coccoides DSM 17374 10496018 YP_004412274.1 CDS Spico_1694 NC_015436.1 2009980 2010345 R COGs: COG0099 Ribosomal protein S13; InterPro IPR019980:IPR001892; KEGG: ssm:Spirs_0977 30S ribosomal protein S13; PFAM: Ribosomal protein S13; SPTR: 30S ribosomal protein S13; TIGRFAM: Ribosomal protein S13, bacterial-type; IMG reference gene:2503958008; PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13; 30S ribosomal protein S13 complement(2009980..2010345) Sphaerochaeta coccoides DSM 17374 10496019 YP_004412275.1 CDS Spico_1695 NC_015436.1 2010372 2010485 R HAMAP: Ribosomal protein L36; InterPro IPR000473; KEGG: ssm:Spirs_0976 ribosomal protein L36; PFAM: Ribosomal protein L36; SPTR: 50S ribosomal protein L36; TIGRFAM: Ribosomal protein L36; IMG reference gene:2503958009; PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type; 50S ribosomal protein L36 complement(2010372..2010485) Sphaerochaeta coccoides DSM 17374 10496020 YP_004412276.1 CDS Spico_1696 NC_015436.1 2010501 2011820 R COGs: COG0201 Preprotein translocase subunit SecY; InterPro IPR002208; KEGG: ssm:Spirs_0975 preprotein translocase, SecY subunit; PFAM: SecY protein; SPTR: uncharacterized protein; TIGRFAM: SecY protein; IMG reference gene:2503958010; PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit; protein translocase subunit secY/sec61 alpha complement(2010501..2011820) Sphaerochaeta coccoides DSM 17374 10496021 YP_004412277.1 CDS Spico_1697 NC_015436.1 2011840 2012274 R COGs: COG0200 Ribosomal protein L15; InterPro IPR005749; KEGG: ddf:DEFDS_1754 50S ribosomal protein L15; SPTR: 50S ribosomal protein L15; TIGRFAM: Ribosomal protein L15, bacterial-type; IMG reference gene:2503958011; PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle; 50S ribosomal protein L15 complement(2011840..2012274) Sphaerochaeta coccoides DSM 17374 10496022 YP_004412278.1 CDS Spico_1698 NC_015436.1 2012276 2012473 R InterPro IPR005996:IPR016082; KEGG: llm:llmg_2363 50S ribosomal protein L30; PFAM: Ribosomal protein L30, ferredoxin-like fold domain; SPTR: 50S ribosomal protein L30; TIGRFAM: Ribosomal protein L30, bacterial-type; IMG reference gene:2503958012; PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle; 50S ribosomal protein L30 complement(2012276..2012473) Sphaerochaeta coccoides DSM 17374 10496023 YP_004412279.1 CDS Spico_1699 NC_015436.1 2012476 2012982 R COGs: COG0098 Ribosomal protein S5; InterPro IPR005712:IPR013810:IPR005324; KEGG: ssm:Spirs_0972 ribosomal protein S5; PFAM: Ribosomal protein S5, N-terminal; Ribosomal protein S5, C-terminal; SPTR: 30S ribosomal protein S5; TIGRFAM: Ribosomal protein S5, bacterial-type; IMG reference gene:2503958013; PFAM: Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type; 30S ribosomal protein S5 complement(2012476..2012982) Sphaerochaeta coccoides DSM 17374 10496024 YP_004412280.1 CDS Spico_1700 NC_015436.1 2012992 2013351 R COGs: COG0256 Ribosomal protein L18; InterPro IPR004389:IPR005484; KEGG: tde:TDE0783 50S ribosomal protein L18; PFAM: Ribosomal protein L18/L5; SPTR: 50S ribosomal protein L18; TIGRFAM: Ribosomal protein L18, bacterial; IMG reference gene:2503958014; PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type; 50S ribosomal protein L18 complement(2012992..2013351) Sphaerochaeta coccoides DSM 17374 10496025 YP_004412281.1 CDS Spico_1701 NC_015436.1 2013369 2013911 R COGs: COG0097 Ribosomal protein L6P/L9E; InterPro IPR019906:IPR020040; KEGG: ssm:Spirs_0970 ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain; SPTR: 50S ribosomal protein L6; TIGRFAM: Ribosomal protein L6, bacterial-type; IMG reference gene:2503958015; PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type; 50S ribosomal protein L6 complement(2013369..2013911) Sphaerochaeta coccoides DSM 17374 10496026 YP_004412282.1 CDS Spico_1702 NC_015436.1 2013922 2014320 R COGs: COG0096 Ribosomal protein S8; InterPro IPR000630; KEGG: ssm:Spirs_0969 ribosomal protein S8; PFAM: Ribosomal protein S8; SPTR: 30S ribosomal protein S8; IMG reference gene:2503958016; PFAM: Ribosomal protein S8; 30S ribosomal protein S8 complement(2013922..2014320) Sphaerochaeta coccoides DSM 17374 10496027 YP_004412283.1 CDS Spico_1703 NC_015436.1 2014330 2014515 R COGs: COG0199 Ribosomal protein S14; InterPro IPR001209; KEGG: ssm:Spirs_0968 ribosomal protein S14; PFAM: Ribosomal protein S14; SPTR: 30S ribosomal protein S14 type Z; IMG reference gene:2503958017; PFAM: Ribosomal protein S14p/S29e; 30S ribosomal protein S14 complement(2014330..2014515) Sphaerochaeta coccoides DSM 17374 10496028 YP_004412284.1 CDS Spico_1704 NC_015436.1 2014531 2015085 R COGs: COG0094 Ribosomal protein L5; InterPro IPR002132; KEGG: ssm:Spirs_0967 ribosomal protein L5; PFAM: Ribosomal protein L5; SPTR: 50S ribosomal protein L5; IMG reference gene:2503958018; PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5; 50S ribosomal protein L5 complement(2014531..2015085) Sphaerochaeta coccoides DSM 17374 10496029 YP_004412285.1 CDS Spico_1705 NC_015436.1 2015085 2015390 R COGs: COG0198 Ribosomal protein L24; InterPro IPR003256:IPR005824; KEGG: ssm:Spirs_0966 ribosomal protein L24; PFAM: KOW; SMART: KOW; SPTR: 50S ribosomal protein L24; TIGRFAM: Ribosomal protein L24; IMG reference gene:2503958019; PFAM: KOW motif; TIGRFAM: ribosomal protein L24, bacterial/organelle; 50S ribosomal protein L24 complement(2015085..2015390) Sphaerochaeta coccoides DSM 17374 10496030 YP_004412286.1 CDS Spico_1706 NC_015436.1 2015400 2015765 R COGs: COG0093 Ribosomal protein L14; InterPro IPR005745:IPR000218; KEGG: ssm:Spirs_0965 ribosomal protein L14; PFAM: Ribosomal protein L14b/L23e; SPTR: 50S ribosomal protein L14; TIGRFAM: Ribosomal protein L14, bacterial-type; IMG reference gene:2503958020; PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle; 50S ribosomal protein L14 complement(2015400..2015765) Sphaerochaeta coccoides DSM 17374 10496031 YP_004412287.1 CDS Spico_1707 NC_015436.1 2015781 2016032 R COGs: COG0186 Ribosomal protein S17; InterPro IPR019984:IPR000266; KEGG: ssm:Spirs_0964 30S ribosomal protein S17; PFAM: Ribosomal protein S17; SPTR: 30S ribosomal protein S17; TIGRFAM: Ribosomal protein S17, bacterial-type; IMG reference gene:2503958021; PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; 30S ribosomal protein S17 complement(2015781..2016032) Sphaerochaeta coccoides DSM 17374 10496032 YP_004412288.1 CDS Spico_1708 NC_015436.1 2016047 2016253 R InterPro IPR001854; KEGG: ssm:Spirs_0963 ribosomal protein L29; PFAM: Ribosomal protein L29; SPTR: 50S ribosomal protein L29; TIGRFAM: Ribosomal protein L29; IMG reference gene:2503958022; PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29; 50S ribosomal protein L29 complement(2016047..2016253) Sphaerochaeta coccoides DSM 17374 10496033 YP_004412289.1 CDS Spico_1709 NC_015436.1 2016259 2016675 R COGs: COG0197 Ribosomal protein L16/L10E; HAMAP: Ribosomal protein L16; InterPro IPR000114:IPR016180; KEGG: ssm:Spirs_0962 ribosomal protein L16; PFAM: Ribosomal protein L10e/L16; SPTR: 50S ribosomal protein L16; TIGRFAM: Ribosomal protein L16; IMG reference gene:2503958023; PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle; 50S ribosomal protein L16 complement(2016259..2016675) Sphaerochaeta coccoides DSM 17374 10496034 YP_004412290.1 CDS Spico_1710 NC_015436.1 2016678 2017388 R COGs: COG0092 Ribosomal protein S3; InterProIPR005704:IPR008282:IPR004044:IPR001351:IPR 004087; KEGG: ssm:Spirs_0961 ribosomal protein S3; PFAM: Ribosomal protein S3, C-terminal; Ribosomal protein S3, N-terminal; K Homology, type 2; SMART: K Homology; SPTR: 30S ribosomal protein S3; TIGRFAM: Ribosomal protein S3, bacterial; IMG reference gene:2503958024; PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type; 30S ribosomal protein S3 complement(2016678..2017388) Sphaerochaeta coccoides DSM 17374 10496035 YP_004412291.1 CDS Spico_1711 NC_015436.1 2017388 2017762 R COGs: COG0091 Ribosomal protein L22; InterPro IPR005727:IPR001063; KEGG: sta:STHERM_c05010 50S ribosomal protein L22; PFAM: Ribosomal protein L22/L17; SPTR: 50S ribosomal protein L22; TIGRFAM: Ribosomal protein L22, bacterial-type; IMG reference gene:2503958025; PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type; 50S ribosomal protein L22 complement(2017388..2017762) Sphaerochaeta coccoides DSM 17374 10496036 YP_004412292.1 CDS Spico_1712 NC_015436.1 2017762 2018040 R COGs: COG0185 Ribosomal protein S19; InterPro IPR005732:IPR002222; KEGG: ssm:Spirs_0959 ribosomal protein S19; PFAM: Ribosomal protein S19/S15; SPTR: 30S ribosomal protein S19; TIGRFAM: Ribosomal protein S19, bacterial-type; IMG reference gene:2503958026; PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle; 30S ribosomal protein S19 complement(2017762..2018040) Sphaerochaeta coccoides DSM 17374 10496037 YP_004412293.1 CDS Spico_1713 NC_015436.1 2018050 2018874 R COGs: COG0090 Ribosomal protein L2; InterPro IPR005880:IPR022666:IPR022669; KEGG: tde:TDE0770 50S ribosomal protein L2; PFAM: Ribosomal protein L2, C-terminal; Ribosomal Proteins L2, RNA binding domain; SPTR: 50S ribosomal protein L2; TIGRFAM: Ribosomal protein L2, bacterial-type; IMG reference gene:2503958027; PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar; 50S ribosomal protein L2 complement(2018050..2018874) Sphaerochaeta coccoides DSM 17374 10496038 YP_004412294.1 CDS Spico_1714 NC_015436.1 2018889 2019224 R COGs: COG0089 Ribosomal protein L23; InterPro IPR013025; KEGG: ssm:Spirs_0957 ribosomal protein L25/L23; PFAM: Ribosomal protein L25/L23; SPTR: 50S ribosomal protein L23; IMG reference gene:2503958028; PFAM: Ribosomal protein L23; 50S ribosomal protein L25 complement(2018889..2019224) Sphaerochaeta coccoides DSM 17374 10496039 YP_004412295.1 CDS Spico_1715 NC_015436.1 2019202 2019831 R COGs: COG0088 Ribosomal protein L4; InterPro IPR002136; KEGG: ssm:Spirs_0956 ribosomal protein L4/L1e; PFAM: Ribosomal protein L4/L1e; SPTR: 50S ribosomal protein L4; IMG reference gene:2503958029; PFAM: Ribosomal protein L4/L1 family; TIGRFAM: 50S ribosomal protein L4, bacterial/organelle; 50S ribosomal protein L4 complement(2019202..2019831) Sphaerochaeta coccoides DSM 17374 10496040 YP_004412296.1 CDS Spico_1716 NC_015436.1 2019841 2020461 R COGs: COG0087 Ribosomal protein L3; InterPro IPR019927:IPR000597; KEGG: ssm:Spirs_0955 50S ribosomal protein L3; PFAM: Ribosomal protein L3; SPTR: 50S ribosomal protein L3; TIGRFAM: Ribosomal protein L3, bacterial/organelle-type; IMG reference gene:2503958030; PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial; 50S ribosomal protein L3P complement(2019841..2020461) Sphaerochaeta coccoides DSM 17374 10496041 YP_004412297.1 CDS Spico_1717 NC_015436.1 2020478 2020786 R COGs: COG0051 Ribosomal protein S10; HAMAP: Ribosomal protein S10 subgroup; InterPro IPR005731:IPR001848; KEGG: ssm:Spirs_0954 ribosomal protein S10; PFAM: Ribosomal protein S10; SPTR: 30S ribosomal protein S10; TIGRFAM: Ribosomal protein S10 subgroup; IMG reference gene:2503958031; PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle; 30S ribosomal protein S10 complement(2020478..2020786) Sphaerochaeta coccoides DSM 17374 10496042 YP_004412298.1 CDS Spico_1718 NC_015436.1 2020850 2022037 R COGs: COG0050 GTPase - translation elongation factors; InterProIPR004541:IPR005225:IPR000795:IPR004161:IPR 004160; KEGG: ssm:Spirs_0953 translation elongation factor Tu; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal; SPTR: Elongation factor Tu-B; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; IMG reference gene:2503958032; PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU; translation elongation factor 1A (EF-1A/EF-Tu) complement(2020850..2022037) Sphaerochaeta coccoides DSM 17374 10496043 YP_004412299.1 CDS Spico_1719 NC_015436.1 2022842 2023312 R COGs: COG0049 Ribosomal protein S7; InterPro IPR005717:IPR000235; KEGG: ssm:Spirs_0952 ribosomal protein S7; PFAM: Ribosomal protein S7; SPTR: 30S ribosomal protein S7; TIGRFAM: Ribosomal protein S7, bacterial-type; IMG reference gene:2503958033; PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle; 30S ribosomal protein S7 complement(2022842..2023312) Sphaerochaeta coccoides DSM 17374 10496044 YP_004412300.1 CDS Spico_1720 NC_015436.1 2023328 2023702 R COGs: COG0048 Ribosomal protein S12; InterPro IPR005679:IPR006032; KEGG: sta:STHERM_c04920 30S ribosomal protein S12; PFAM: Ribosomal protein S12/S23; SPTR: 30S ribosomal protein S12; TIGRFAM: Ribosomal protein S12, bacteria; IMG reference gene:2503958034; PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle; 30S ribosomal protein S12 complement(2023328..2023702) Sphaerochaeta coccoides DSM 17374 10496045 YP_004412301.1 CDS Spico_1721 NC_015436.1 2023884 2028173 R COGs: COG0086 DNA-directed RNA polymerase beta' subunit/160 kD subunit; HAMAP: DNA-directed RNA polymerase, subunit beta-prime; InterProIPR012754:IPR007080:IPR000722:IPR007066:IPR 007083:IPR007081:IPR006592; KEGG: ssm:Spirs_0950 DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1, domain 1; RNA polymerase, alpha subunit; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 5; SMART: RNA polymerase, N-terminal; SPTR: DNA-directed RNA polymerase, beta' subunit; TIGRFAM: DNA-directed RNA polymerase, subunit beta-prime; IMG reference gene:2503958035; PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 5; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form; DNA-directed RNA polymerase subunit beta' complement(2023884..2028173) Sphaerochaeta coccoides DSM 17374 10496046 YP_004412302.1 CDS Spico_1722 NC_015436.1 2028187 2031705 R COGs: COG0085 DNA-directed RNA polymerase beta subunit/140 kD subunit; HAMAP: DNA-directed RNA polymerase, beta subunit, bacterial-type; InterProIPR010243:IPR007644:IPR007642:IPR007645:IPR 019462:IPR007120:IPR007641; KEGG: ssm:Spirs_0949 DNA-directed RNA polymerase, beta subunit; PFAM: DNA-directed RNA polymerase, subunit 2, domain 6; RNA polymerase Rpb2, domain 3; RNA polymerase, beta subunit, protrusion; RNA polymerase Rpb2, domain 2; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2, domain 7; SPTR: DNA-directed RNA polymerase, beta subunit; TIGRFAM: DNA-directed RNA polymerase, beta subunit, bacterial-type; IMG reference gene:2503958036; PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit; DNA-directed RNA polymerase subunit beta complement(2028187..2031705) Sphaerochaeta coccoides DSM 17374 10496047 YP_004412303.1 CDS Spico_1723 NC_015436.1 2031924 2032304 R COGs: COG0222 Ribosomal protein L7/L12; HAMAP: Ribosomal protein L7/L12; InterPro IPR000206:IPR013823; KEGG: aeh:Mlg_0450 50S ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12, C-terminal; SPTR: 50S ribosomal protein L7/L12; TIGRFAM: Ribosomal protein L7/L12; IMG reference gene:2503958037; PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12; 50S ribosomal protein L12 complement(2031924..2032304) Sphaerochaeta coccoides DSM 17374 10496048 YP_004412304.1 CDS Spico_1724 NC_015436.1 2032368 2032925 R COGs: COG0244 Ribosomal protein L10; HAMAP: Ribosomal protein L10; InterPro IPR022973:IPR001790; KEGG: ssm:Spirs_0947 ribosomal protein L10; PFAM: Ribosomal protein L10/acidic P0; SPTR: 50S ribosomal protein L10; IMG reference gene:2503958038; PFAM: Ribosomal protein L10; 50S ribosomal protein L10 complement(2032368..2032925) Sphaerochaeta coccoides DSM 17374 10496049 YP_004412305.1 CDS Spico_1725 NC_015436.1 2032939 2033634 R COGs: COG0081 Ribosomal protein L1; InterPro IPR005878:IPR002143; KEGG: ssm:Spirs_0946 ribosomal protein L1; PFAM: Ribosomal protein L1; SPTR: 50S ribosomal protein L1; TIGRFAM: Ribosomal protein L1, bacterial-type; IMG reference gene:2503958039; PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast; 50S ribosomal protein L1 complement(2032939..2033634) Sphaerochaeta coccoides DSM 17374 10496050 YP_004412306.1 CDS Spico_1726 NC_015436.1 2033636 2034067 R COGs: COG0080 Ribosomal protein L11; InterPro IPR006519:IPR020784:IPR020783:IPR000911; KEGG: sta:STHERM_c04860 50S ribosomal protein L11; PFAM: Ribosomal protein L11, C-terminal domain; Ribosomal protein L11, N-terminal domain; SMART: Ribosomal protein L11; SPTR: 50S ribosomal protein L11; TIGRFAM: Ribosomal protein L11, bacterial-type; IMG reference gene:2503958040; PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11; 50S ribosomal protein L17 complement(2033636..2034067) Sphaerochaeta coccoides DSM 17374 10496051 YP_004412307.1 CDS Spico_1727 NC_015436.1 2034271 2034840 R COGs: COG0250 Transcription antiterminator; InterPro IPR001062:IPR006645:IPR005824; KEGG: ssm:Spirs_0944 NusG antitermination factor; PFAM: Transcription antitermination protein, NusG, N-terminal; KOW; SMART: Transcription antitermination protein, NusG, N-terminal; KOW; SPTR: uncharacterized protein; TIGRFAM: Transcription antitermination protein, NusG; IMG reference gene:2503958041; PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG; transcription antitermination protein nusG complement(2034271..2034840) Sphaerochaeta coccoides DSM 17374 10496052 YP_004412308.1 CDS Spico_1728 NC_015436.1 2034849 2035028 R InterPro IPR005807:IPR001901; KEGG: ssm:Spirs_0943 preprotein translocase, SecE subunit; PFAM: Protein SecE/Sec61-gamma protein; SPTR: Preprotein translocase subunit SecE; TIGRFAM: SecE subunit of protein translocation complex; IMG reference gene:2503958042; PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial; Preprotein translocase subunit SecE complement(2034849..2035028) Sphaerochaeta coccoides DSM 17374 10496053 YP_004412309.1 CDS Spico_1729 NC_015436.1 2035161 2035337 R HAMAP: Ribosomal protein L33; InterPro IPR001705; KEGG: ssm:Spirs_0942 ribosomal protein L33; PFAM: Ribosomal protein L33; SPTR: 50S ribosomal protein L33; TIGRFAM: Ribosomal protein L33; IMG reference gene:2503958044; PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type; 50S ribosomal protein L33 complement(2035161..2035337) Sphaerochaeta coccoides DSM 17374 10496055 YP_004412310.1 CDS Spico_1730 NC_015436.1 2035715 2036506 D COGs: COG0647 sugar phosphatase of the HAD superfamily; InterPro IPR006357:IPR005834; KEGG: ssm:Spirs_3233 HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: Haloacid dehalogenase-like hydrolase, ; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; IMG reference gene:2503958046; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily subfamily IIA hydrolase, TIGR01457; Haloacid Dehalogenase Superfamily Class (subfamily) IIA; HAD-superfamily hydrolase 2035715..2036506 Sphaerochaeta coccoides DSM 17374 10496057 YP_004412311.1 CDS Spico_1731 NC_015436.1 2036581 2039826 R COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); InterProIPR006275:IPR005481:IPR005479:IPR005480:IPR 011607; KEGG: sta:STHERM_c07390 carbamoyl-phosphate synthase large chain; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Carbamoyl-phosphate synthetase, large subunit, oligomerisation; Methylglyoxal synthase-like domain; PRIAM: Carbamoyl-phosphate synthase (ammonia); SMART: Methylglyoxal synthase-like domain; SPTR: Carbamoyl-phosphate synthase large chain; TIGRFAM: Carbamoyl-phosphate synthase, large subunit; IMG reference gene:2503958047; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit; carbamoyl-phosphate synthase large subunit complement(2036581..2039826) Sphaerochaeta coccoides DSM 17374 10496058 YP_004412312.1 CDS Spico_1732 NC_015436.1 2039810 2041030 R COGs: COG0505 Carbamoylphosphate synthase small subunit; InterPro IPR006274:IPR002474:IPR000991; KEGG: ssm:Spirs_3538 carbamoyl-phosphate synthase, small subunit; PFAM: Glutamine amidotransferase class-I, C-terminal; Carbamoyl-phosphate synthase, small subunit, N-terminal; PRIAM: Carbamoyl-phosphate synthase (glutamine-hydrolyzing); SPTR: Carbamoyl-phosphate synthase small chain; TIGRFAM: Carbamoyl-phosphate synthase, small subunit; IMG reference gene:2503958048; PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit; carbamoyl-phosphate synthase small subunit complement(2039810..2041030) Sphaerochaeta coccoides DSM 17374 10496059 YP_004412313.1 CDS Spico_1733 NC_015436.1 2041509 2043947 D COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR011110:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; Listeria/Bacterioides repeat; Two component regulator propeller; SPTR: uncharacterized protein; IMG reference gene:2503958049; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 2041509..2043947 Sphaerochaeta coccoides DSM 17374 10496060 YP_004412314.1 CDS Spico_1734 NC_015436.1 2044012 2046021 R InterPro IPR012480; KEGG: csh:Closa_4172 heparinase II/III family protein; PFAM: Heparinase II/III-like; SPTR: uncharacterized protein; IMG reference gene:2503958050; PFAM: Heparinase II/III-like protein; heparinase II/III family protein complement(2044012..2046021) Sphaerochaeta coccoides DSM 17374 10496061 YP_004412315.1 CDS Spico_1735 NC_015436.1 2046045 2047229 R InterPro IPR010905; KEGG: rlg:Rleg_5051 glycosyl hydrolase 88; PFAM: Glycosyl hydrolase, family 88; SPTR: Glycosyl hydrolase 88; IMG reference gene:2503958051; PFAM: Glycosyl Hydrolase 88; glycosyl hydrolase 88 complement(2046045..2047229) Sphaerochaeta coccoides DSM 17374 10496062 YP_004412316.1 CDS Spico_1736 NC_015436.1 2047301 2048137 R COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: avi:Avi_7346 ABC transporter membrane spanning protein (sugar); PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Sugar ABC transporter; IMG reference gene:2503958052; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 2 complement(2047301..2048137) Sphaerochaeta coccoides DSM 17374 10496063 YP_004412317.1 CDS Spico_1737 NC_015436.1 2048147 2049067 R COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: rle:pRL120664 permease component of ABC transporter; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Probable sugar ABC transporter, permease; IMG reference gene:2503958053; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 1 complement(2048147..2049067) Sphaerochaeta coccoides DSM 17374 10496064 YP_004412318.1 CDS Spico_1738 NC_015436.1 2049160 2049303 D IMG reference gene:2503958054; hypothetical protein 2049160..2049303 Sphaerochaeta coccoides DSM 17374 10496065 YP_004412319.1 CDS Spico_1739 NC_015436.1 2049271 2050551 R COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: rec:RHECIAT_PC0000519 sugar ABC transporter, substrate-binding protein; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein, family 1; IMG reference gene:2503958055; PFAM: Bacterial extracellular solute-binding protein; carbohydrate ABC transporter substrate-binding protein complement(2049271..2050551) Sphaerochaeta coccoides DSM 17374 10496066 YP_004412320.1 CDS Spico_1740 NC_015436.1 2050820 2052622 D COGs: COG2972 signal transduction protein with a C-terminal ATPase domain; InterPro IPR003660:IPR010559:IPR003594; KEGG: csh:Closa_1925 integral membrane sensor signal transduction histidine kinase; PFAM: Signal transduction histidine kinase, internal region; HAMP linker domain; ATPase-like, ATP-binding domain; SMART: HAMP linker domain; ATPase-like, ATP-binding domain; SPTR: uncharacterized protein; IMG reference gene:2503958056; PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; integral membrane sensor signal transduction histidine kinase 2050820..2052622 Sphaerochaeta coccoides DSM 17374 10496067 YP_004412321.1 CDS Spico_1741 NC_015436.1 2052619 2054244 D COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR001789:IPR000005:IPR018060; KEGG: csh:Closa_1924 two component transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; Signal transduction response regulator, receiver domain; SMART: Helix-turn-helix, AraC type, DNA binding domain; Signal transduction response regulator, receiver domain; SPTR: Two component transcriptional regulator; IMG reference gene:2503958057; PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator 2052619..2054244 Sphaerochaeta coccoides DSM 17374 10496068 YP_004412322.1 CDS Spico_1742 NC_015436.1 2054241 2056163 D InterPro IPR012480; KEGG: csh:Closa_1714 heparinase II/III family protein; PFAM: Heparinase II/III-like; SPTR: uncharacterized protein; IMG reference gene:2503958058; PFAM: Heparinase II/III-like protein; heparinase II/III family protein 2054241..2056163 Sphaerochaeta coccoides DSM 17374 10496069 YP_004412323.1 CDS Spico_1743 NC_015436.1 2056160 2056981 D KEGG: ret:RHE_PF00314 hypothetical protein; SPTR: Hypothetical conserved protein; IMG reference gene:2503958059; hypothetical protein 2056160..2056981 Sphaerochaeta coccoides DSM 17374 10496070 YP_004412324.1 CDS Spico_1744 NC_015436.1 2057029 2058324 D COGs: COG1767 Triphosphoribosyl-dephospho-CoA synthetase; InterPro IPR005551:IPR002736; KEGG: aat:D11S_0857 apo-citrate lyase phosphoribosyl-dephospho-CoA transferase/2-(5-triphosphoribosyl)-3-dephosphocoenzyme-A synthase; PFAM: Triphosphoribosyl-dephospho-CoA protein; Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; SPTR: Holo-acyl-carrier-protein synthase; TIGRFAM: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; IMG reference gene:2503958060; PFAM: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; ATP:dephospho-CoA triphosphoribosyl transferase; TIGRFAM: holo-ACP synthase CitX; holo-ACP synthase 2057029..2058324 Sphaerochaeta coccoides DSM 17374 10496071 YP_004412325.1 CDS Spico_1745 NC_015436.1 2058350 2059366 R COGs: COG3053 Citrate lyase synthetase; InterPro IPR005216:IPR004821:IPR000182:IPR013166; KEGG: fnu:FN0319 citrate (pro-3S)-lyase ligase; PFAM: Citrate lyase ligase, C-terminal; GCN5-related N-acetyltransferase (GNAT) domain; PRIAM: [Citrate (pro-3S)-lyase] ligase; SMART: Citrate lyase ligase, C-terminal; SPTR: [citrate (Pro-3S)-lyase] ligase; TIGRFAM: Citrate lyase ligase; Cytidyltransferase-related; IMG reference gene:2503958061; PFAM: Citrate lyase ligase C-terminal domain; TIGRFAM: [citrate (pro-3S)-lyase] ligase; cytidyltransferase-related domain; citrate lyase ligase complement(2058350..2059366) Sphaerochaeta coccoides DSM 17374 10496072 YP_004412326.1 CDS Spico_1746 NC_015436.1 2059489 2060637 R COGs: COG3180 ammonia monooxygenase; InterPro IPR017516:IPR007820; KEGG: sds:SDEG_0995 ammonia monooxygenase; PFAM: ammonia monooxygenase; SPTR: uncharacterized protein; TIGRFAM: AbrB duplication, membrane protein; IMG reference gene:2503958062; PFAM: ammonia monooxygenase; TIGRFAM: membrane protein AbrB duplication; membrane protein AbrB complement(2059489..2060637) Sphaerochaeta coccoides DSM 17374 10496073 YP_004412327.1 CDS Spico_1747 NC_015436.1 2060818 2062197 R COGs: COG2851 H+/citrate symporter; InterPro IPR014738:IPR004680; KEGG: lsa:LSA1232 citrate:Mg(2+)(H+) symporter; PFAM: Divalent ion symporter; SPTR: Citrate:Mg(2+)(H+) symporter; TIGRFAM: Citrate transporter; IMG reference gene:2503958063; PFAM: Citrate transporter; TIGRFAM: citrate transporter, CitMHS family; CitMHS family citrate/H+ symporter complement(2060818..2062197) Sphaerochaeta coccoides DSM 17374 10496074 YP_004412328.1 CDS Spico_1748 NC_015436.1 2062409 2063959 R COGs: COG3051 Citrate lyase alpha subunit; InterPro IPR006472; KEGG: afn:Acfer_0408 citrate lyase, alpha subunit; PFAM: Citrate lyase, alpha subunit; PRIAM: Citrate CoA-transferase; SPTR: Citrate lyase, alpha subunit; TIGRFAM: Citrate lyase, alpha subunit; IMG reference gene:2503958064; PFAM: Citrate lyase, alpha subunit (CitF); TIGRFAM: citrate lyase, alpha subunit; citrate lyase subunit alpha complement(2062409..2063959) Sphaerochaeta coccoides DSM 17374 10496075 YP_004412329.1 CDS Spico_1749 NC_015436.1 2063956 2064861 R COGs: COG2301 Citrate lyase beta subunit; InterPro IPR005000; KEGG: afn:Acfer_0409 citrate (pro-3S)-lyase; PFAM: Aldehyde-lyase domain; PRIAM: Citryl-CoA lyase; SPTR: Citrate lyase, beta subunit; IMG reference gene:2503958065; PFAM: HpcH/HpaI aldolase/citrate lyase; TIGRFAM: citrate lyase, beta subunit; citryl-CoA lyase complement(2063956..2064861) Sphaerochaeta coccoides DSM 17374 10496076 YP_004412330.1 CDS Spico_1750 NC_015436.1 2064858 2065154 R COGs: COG3052 Citrate lyase gamma subunit; HAMAP: Citrate lyase acyl carrier protein CitD; InterPro IPR006495; KEGG: afn:Acfer_0410 citrate lyase acyl carrier protein; SPTR: Citrate lyase acyl carrier protein; TIGRFAM: Citrate lyase acyl carrier protein CitD; IMG reference gene:2503958066; PFAM: Malonate decarboxylase delta subunit (MdcD); TIGRFAM: citrate lyase acyl carrier protein; Citrate lyase acyl carrier protein complement(2064858..2065154) Sphaerochaeta coccoides DSM 17374 10496077 YP_004412331.1 CDS Spico_1751 NC_015436.1 2065268 2066221 D COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR005119; KEGG: cac:CA_C1046 LysR family transcriptional regulator; PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; SPTR: Transcriptional regulator; manually curated; IMG reference gene:2503958067; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; LysR family transcriptional regulator 2065268..2066221 Sphaerochaeta coccoides DSM 17374 10496078 YP_004412332.1 CDS Spico_1752 NC_015436.1 2066372 2066992 D COGs: COG0605 Superoxide dismutase; InterPro IPR019831:IPR019832; KEGG: csh:Closa_3787 manganese/iron superoxide dismutase-like protein; PFAM: Manganese/iron superoxide dismutase, C-terminal; Manganese/iron superoxide dismutase, N-terminal; SPTR: Superoxide dismutase; IMG reference gene:2503958068; PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain; manganese/iron superoxide dismutase 2066372..2066992 Sphaerochaeta coccoides DSM 17374 10496079 YP_004412333.1 CDS Spico_1753 NC_015436.1 2067354 2069477 D COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; IMG reference gene:2503958069; PFAM: Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 2067354..2069477 Sphaerochaeta coccoides DSM 17374 10496080 YP_004412334.1 CDS Spico_1754 NC_015436.1 2069686 2070207 D KEGG: bmq:BMQ_1790 secreted protein; SPTR: secreted protein; IMG reference gene:2503958070; hypothetical protein 2069686..2070207 Sphaerochaeta coccoides DSM 17374 10496081 YP_004412335.1 CDS Spico_1755 NC_015436.1 2070413 2071510 R COGs: COG0641 Arylsulfatase regulator (Fe-S oxidoreductase); InterPro IPR007197; KEGG: str:Sterm_2101 radical SAM domain protein; PFAM: Radical SAM; SPTR: uncharacterized protein; IMG reference gene:2503958071; PFAM: Radical SAM superfamily; TIGRFAM: anaerobic sulfatase-maturating enzyme; radical SAM additional 4Fe4S-binding domain; radical SAM protein complement(2070413..2071510) Sphaerochaeta coccoides DSM 17374 10496082 YP_004412336.1 CDS Spico_1756 NC_015436.1 2071507 2072355 R InterPro IPR002781; KEGG: ssm:Spirs_3034 protein of unknown function DUF81; PFAM: Protein of unknown function DUF81; SPTR: uncharacterized protein; IMG reference gene:2503958072; PFAM: Sulfite exporter TauE/SafE; hypothetical protein complement(2071507..2072355) Sphaerochaeta coccoides DSM 17374 10496083 YP_004412337.1 CDS Spico_1757 NC_015436.1 2072548 2073615 R COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; KEGG: tte:TTE1809 alpha/beta fold family hydrolase; SPTR: Peptidoglycan-binding lysin domain protein; IMG reference gene:2503958073; PFAM: Prolyl oligopeptidase; hypothetical protein complement(2072548..2073615) Sphaerochaeta coccoides DSM 17374 10496084 YP_004412338.1 CDS Spico_1758 NC_015436.1 2073882 2074805 R COGs: COG0031 Cysteine synthase; InterPro IPR005856:IPR005859:IPR001926; KEGG: geo:Geob_2530 cysteine synthase A; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; PRIAM: Cysteine synthase; SPTR: Cysteine synthase; TIGRFAM: Cysteine synthase A; Cysteine synthase K/M; IMG reference gene:2503958074; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases; cysteine synthase complement(2073882..2074805) Sphaerochaeta coccoides DSM 17374 10496085 YP_004412339.1 CDS Spico_1759 NC_015436.1 2074980 2075930 R COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: dac:Daci_3532 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator, AraC family protein; IMG reference gene:2503958075; AraC family transcriptional regulator complement(2074980..2075930) Sphaerochaeta coccoides DSM 17374 10496086 YP_004412340.1 CDS Spico_1760 NC_015436.1 2075911 2076381 R COGs: COG0822 NifU homolog involved in Fe-S cluster formation; InterPro IPR011341:IPR002871; KEGG: cbe:Cbei_1852 NifU family SUF system FeS assembly protein; PFAM: NIF system FeS cluster assembly, NifU, N-terminal; SPTR: SUF system FeS assembly protein, NifU family; TIGRFAM: SUF system FeS cluster assembly, SufU scaffold; IMG reference gene:2503958076; PFAM: NifU-like N terminal domain; TIGRFAM: SUF system FeS assembly protein, NifU family; NifU family SUF system FeS assembly protein complement(2075911..2076381) Sphaerochaeta coccoides DSM 17374 10496087 YP_004412341.1 CDS Spico_1761 NC_015436.1 2076371 2077627 R COGs: COG0520 Selenocysteine lyase; InterPro IPR010970:IPR000192; KEGG: cac:CA_C3291 selenocysteine lyase; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Cysteine desulfurase; SPTR: Cysteine desulfurase; TIGRFAM: Cysteine desulfurase, SufS; IMG reference gene:2503958077; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufS subfamily; cysteine desulfurase complement(2076371..2077627) Sphaerochaeta coccoides DSM 17374 10496088 YP_004412342.1 CDS Spico_1762 NC_015436.1 2077624 2078724 R COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR000825; KEGG: cac:CA_C3290 iron-regulated ABC-type transporter membrane component (SufB); PFAM: SUF system FeS cluster assembly, SufBD; SPTR: FeS assembly protein SufD; IMG reference gene:2503958078; PFAM: Uncharacterized protein family (UPF0051); SufBD protein complement(2077624..2078724) Sphaerochaeta coccoides DSM 17374 10496089 YP_004412343.1 CDS Spico_1763 NC_015436.1 2078733 2080151 R COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR010231:IPR000825; KEGG: cbe:Cbei_1849 FeS assembly protein SufB; PFAM: SUF system FeS cluster assembly, SufBD; SPTR: FeS assembly protein SufB; TIGRFAM: SUF system FeS cluster assembly, SufB; IMG reference gene:2503958079; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB; Iron-regulated ABC transporter membrane component SufB complement(2078733..2080151) Sphaerochaeta coccoides DSM 17374 10496090 YP_004412344.1 CDS Spico_1764 NC_015436.1 2080156 2080905 R COGs: COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component; InterPro IPR010230:IPR003439:IPR003593; KEGG: vpr:Vpar_1031 FeS assembly ATPase SufC; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: FeS assembly ATPase SufC; TIGRFAM: ATPase SufC, SUF system FeS cluster assembly; IMG reference gene:2503958080; PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC; Iron-regulated ABC transporter ATPase subunit SufC complement(2080156..2080905) Sphaerochaeta coccoides DSM 17374 10496091 YP_004412345.1 CDS Spico_1765 NC_015436.1 2081135 2082217 R COGs: COG0208 Ribonucleotide reductase beta subunit; InterPro IPR000358; KEGG: tde:TDE0335 ribonucleotide-diphosphate reductase subunit beta; PFAM: Ribonucleotide reductase; SPTR: Ribonucleoside-diphosphate reductase, beta subunit; IMG reference gene:2503958081; PFAM: Ribonucleotide reductase, small chain; ribonucleotide reductase complement(2081135..2082217) Sphaerochaeta coccoides DSM 17374 10496092 YP_004412346.1 CDS Spico_1766 NC_015436.1 2082281 2084827 R InterPro IPR013346:IPR005144:IPR013509:IPR000788; KEGG: tde:TDE0341 ribonucleotide-diphosphate reductase subunit alpha; PFAM: Ribonucleotide reductase large subunit, C-terminal; Ribonucleotide reductase large subunit, N-terminal; ATP-cone; SPTR: Ribonucleoside-diphosphate reductase; TIGRFAM: Ribonucleoside-diphosphate reductase, alpha subunit; IMG reference gene:2503958082; PFAM: Ribonucleotide reductase, all-alpha domain; ATP cone domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; ribonucleoside-diphosphate reductase subunit alpha complement(2082281..2084827) Sphaerochaeta coccoides DSM 17374 10496093 YP_004412347.1 CDS Spico_1767 NC_015436.1 2085219 2086775 D COGs: COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful); HAMAP: AICARFT/IMPCHase bienzyme; InterPro IPR002695:IPR011607:IPR013982; KEGG: sul:SYO3AOP1_1066 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme, transformylase domain; Methylglyoxal synthase-like domain; PRIAM: Phosphoribosylaminoimidazolecarboxamide formyltransferase; SMART: AICARFT/IMPCHase bienzyme, transformylase domain; Methylglyoxal synthase-like domain; SPTR: Bifunctional purine biosynthesis protein purH; TIGRFAM: AICARFT/IMPCHase bienzyme; IMG reference gene:2503958083; PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; IMP cyclohydrolase 2085219..2086775 Sphaerochaeta coccoides DSM 17374 10496094 YP_004412348.1 CDS Spico_1768 NC_015436.1 2086852 2088186 R COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR006097:IPR006096; KEGG: ssm:Spirs_3994 glutamate dehydrogenase (NADP(+)); PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain; PRIAM: Glutamate dehydrogenase (NADP(+)); SMART: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; SPTR: NAD dependent glutamate dehydrogenase 1; IMG reference gene:2503958084; PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; glutamate dehydrogenase complement(2086852..2088186) Sphaerochaeta coccoides DSM 17374 10496095 YP_004412349.1 CDS Spico_1769 NC_015436.1 2088603 2090294 R COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing); InterPro IPR006426:IPR000583:IPR001962; KEGG: fba:FIC_01692 asparagine synthetase B; PFAM: Asparagine synthase; Glutamine amidotransferase, class-II; PRIAM: Asparagine synthase (glutamine-hydrolyzing); SPTR: Asparagine synthetase (Glutamine-hydrolyzing); TIGRFAM: Asparagine synthase, glutamine-hydrolyzing; IMG reference gene:2503958085; PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); asparagine synthase complement(2088603..2090294) Sphaerochaeta coccoides DSM 17374 10496096 YP_004412350.1 CDS Spico_1770 NC_015436.1 2090539 2092890 D COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; Listeria/Bacterioides repeat; SPTR: uncharacterized protein; IMG reference gene:2503958086; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 2090539..2092890 Sphaerochaeta coccoides DSM 17374 10496097 YP_004412351.1 CDS Spico_1771 NC_015436.1 2092971 2094182 R COGs: COG4992 Ornithine/acetylornithine aminotransferase; HAMAP: Acetylornithine/succinyldiaminopimelate aminotransferase; InterPro IPR004636:IPR005814; KEGG: eel:EUBELI_00596 acetylornithine aminotransferase; PFAM: Aminotransferase class-III; PRIAM: Acetylornithine transaminase; SPTR: Acetylornithine aminotransferase; TIGRFAM: Acetylornithine/succinylornithine aminotransferase; IMG reference gene:2503958087; PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine aminotransferases; Acetylornithine/succinyldiaminopimelate aminotransferase complement(2092971..2094182) Sphaerochaeta coccoides DSM 17374 10496098 YP_004412352.1 CDS Spico_1772 NC_015436.1 2094179 2095108 R COGs: COG0548 Acetylglutamate kinase; InterPro IPR004662:IPR001048; KEGG: tmt:Tmath_2088 acetylglutamate kinase; PFAM: Aspartate/glutamate/uridylate kinase; PRIAM: Acetylglutamate kinase; SPTR: Acetylglutamate kinase; TIGRFAM: Acetylglutamate kinase; IMG reference gene:2503958088; PFAM: Amino acid kinase; TIGRFAM: acetylglutamate kinase; N-acetylglutamate kinase complement(2094179..2095108) Sphaerochaeta coccoides DSM 17374 10496099 YP_004412353.1 CDS Spico_1773 NC_015436.1 2095115 2096401 R COGs: COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase); HAMAP: Arginine biosynthesis protein ArgJ; InterPro IPR002813; KEGG: sth:STH2890 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase; PFAM: Arginine biosynthesis protein ArgJ; PRIAM: Amino-acid N-acetyltransferase; SPTR: uncharacterized protein; TIGRFAM: Arginine biosynthesis protein ArgJ; IMG reference gene:2503958089; PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase; N-acetylglutamate synthase complement(2095115..2096401) Sphaerochaeta coccoides DSM 17374 10496100 YP_004412354.1 CDS Spico_1774 NC_015436.1 2096415 2097467 R COGs: COG0002 Acetylglutamate semialdehyde dehydrogenase; HAMAP: N-acetyl-gamma-glutamyl-phosphate reductase, type 1; InterPro IPR000706:IPR000534:IPR012280; KEGG: bpb:bpr_I1813 N-acetyl-gamma-glutamyl-phosphate reductase ArgC; PFAM: Semialdehyde dehydrogenase, NAD-binding; Semialdehyde dehydrogenase, dimerisation domain; PRIAM: N-acetyl-gamma-glutamyl-phosphate reductase; SMART: Semialdehyde dehydrogenase, NAD-binding; SPTR: N-acetyl-gamma-glutamyl-phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, type 1; IMG reference gene:2503958090; PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form; N-acetyl-gamma-glutamyl-phosphate reductase complement(2096415..2097467) Sphaerochaeta coccoides DSM 17374 10496101 YP_004412355.1 CDS Spico_1775 NC_015436.1 2097703 2098833 D COGs: COG1929 Glycerate kinase; InterPro IPR004381; KEGG: cth:Cthe_1592 glycerate kinase; PFAM: Glycerate kinase; PRIAM: Glycerate kinase; SPTR: uncharacterized protein; TIGRFAM: Glycerate kinase; IMG reference gene:2503958091; PFAM: Glycerate kinase; TIGRFAM: glycerate kinase; glycerate kinase 2097703..2098833 Sphaerochaeta coccoides DSM 17374 10496102 YP_004412356.1 CDS Spico_1776 NC_015436.1 2098822 2100195 R COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR002218; KEGG: csh:Closa_4238 glucose-inhibited division protein A; PFAM: Glucose-inhibited division protein A-related; SPTR: Glucose-inhibited division protein A; IMG reference gene:2503958092; PFAM: Pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A complement(2098822..2100195) Sphaerochaeta coccoides DSM 17374 10496103 YP_004412357.1 CDS Spico_1777 NC_015436.1 2100176 2100865 R KEGG: csh:Closa_4239 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503958093; hypothetical protein complement(2100176..2100865) Sphaerochaeta coccoides DSM 17374 10496104 YP_004412358.1 CDS Spico_1778 NC_015436.1 2100914 2103067 R COGs: COG0145 N-methylhydantoinase A/acetone carboxylase beta subunit; InterPro IPR008040:IPR002821; KEGG: csh:Closa_4240 hydantoinase/oxoprolinase; PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; SPTR: Hydantoinase/oxoprolinase; IMG reference gene:2503958094; PFAM: Hydantoinase/oxoprolinase; Hydantoinase/oxoprolinase N-terminal region; hydantoinase/oxoprolinase complement(2100914..2103067) Sphaerochaeta coccoides DSM 17374 10496105 YP_004412359.1 CDS Spico_1779 NC_015436.1 2103102 2104406 R InterPro IPR010656; KEGG: csh:Closa_4241 C4-dicarboxylate anaerobic carrier-like protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: C4-dicarboxylate anaerobic carrier-like protein; IMG reference gene:2503958095; PFAM: Citrate transporter; TRAP dicarboxylate transporter subunit DctM complement(2103102..2104406) Sphaerochaeta coccoides DSM 17374 10496106 YP_004412360.1 CDS Spico_1780 NC_015436.1 2104521 2105216 R KEGG: csh:Closa_4242 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503958096; hypothetical protein complement(2104521..2105216) Sphaerochaeta coccoides DSM 17374 10496107 YP_004412361.1 CDS Spico_1781 NC_015436.1 2105250 2106311 R KEGG: csh:Closa_4243 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503958097; hypothetical protein complement(2105250..2106311) Sphaerochaeta coccoides DSM 17374 10496108 YP_004412362.1 CDS Spico_1782 NC_015436.1 2106622 2108709 R COGs: COG3968 Uncharacterized protein related to glutamine synthetase; InterPro IPR008146; KEGG: cth:Cthe_0196 glutamine synthetase, catalytic region; PFAM: Glutamine synthetase, catalytic domain; PRIAM: Glutamate--ammonia ligase; SPTR: uncharacterized protein; IMG reference gene:2503958098; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase type III N terminal; L-glutamine synthetase complement(2106622..2108709) Sphaerochaeta coccoides DSM 17374 10496109 YP_004412363.1 CDS Spico_1783 NC_015436.1 2109023 2109592 D InterPro IPR005561; KEGG: cth:Cthe_0203 response regulator receiver/ANTAR domain-containing protein; PFAM: ANTAR; SPTR: uncharacterized protein; IMG reference gene:2503958099; PFAM: ANTAR domain; ANTAR domain-containing protein 2109023..2109592 Sphaerochaeta coccoides DSM 17374 10496110 YP_004412364.1 CDS Spico_1784 NC_015436.1 2109627 2111237 D COGs: COG0504 CTP synthase (UTP-ammonia lyase); HAMAP: CTP synthase; InterPro IPR004468:IPR017456:IPR000991; KEGG: clj:CLJU_c02200 CTP synthase; PFAM: CTP synthase, N-terminal; Glutamine amidotransferase class-I, C-terminal; PRIAM: CTP synthase; SPTR: CTP synthase; TIGRFAM: CTP synthase; IMG reference gene:2503958100; PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase; CTP synthase 2109627..2111237 Sphaerochaeta coccoides DSM 17374 10496111 YP_004412365.1 CDS Spico_1785 NC_015436.1 2111423 2111893 D COGs: COG1438 Arginine repressor; HAMAP: Arginine repressor; InterPro IPR001669:IPR020900:IPR020899; KEGG: ssm:Spirs_3243 arginine repressor, ArgR; PFAM: Arginine repressor, DNA-binding domain; Arginine repressor, C-terminal; SPTR: Arginine repressor; IMG reference gene:2503958101; PFAM: Arginine repressor, C-terminal domain; Arginine repressor, DNA binding domain; TIGRFAM: arginine repressor; arginine repressor ArgR 2111423..2111893 Sphaerochaeta coccoides DSM 17374 10496112 YP_004412366.1 CDS Spico_1786 NC_015436.1 2111970 2113553 D COGs: COG0166 Glucose-6-phosphate isomerase; HAMAP: Phosphoglucose isomerase (PGI); InterPro IPR001672; KEGG: ssm:Spirs_3245 phosphoglucose isomerase (PGI); PFAM: Phosphoglucose isomerase (PGI); PRIAM: Glucose-6-phosphate isomerase; SPTR: Glucose-6-phosphate isomerase; IMG reference gene:2503958102; PFAM: Phosphoglucose isomerase; glucose-6-phosphate isomerase 2111970..2113553 Sphaerochaeta coccoides DSM 17374 10496113 YP_004412367.1 CDS Spico_1787 NC_015436.1 2113677 2113874 R SPTR: uncharacterized protein; IMG reference gene:2503958103; hypothetical protein complement(2113677..2113874) Sphaerochaeta coccoides DSM 17374 10496114 YP_004412368.1 CDS Spico_1788 NC_015436.1 2113925 2115253 R COGs: COG0205 6-phosphofructokinase; InterPro IPR000023; KEGG: ssm:Spirs_3247 phosphofructokinase; PFAM: Phosphofructokinase domain; PRIAM: 6-phosphofructokinase; SPTR: Diphosphate--fructose-6-phosphate 1-phosphotransferase; IMG reference gene:2503958104; PFAM: Phosphofructokinase; 6-phosphofructokinase complement(2113925..2115253) Sphaerochaeta coccoides DSM 17374 10496115 YP_004412369.1 CDS Spico_1789 NC_015436.1 2115387 2116721 R COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: ssm:Spirs_1023 aminotransferase class I and II; PFAM: Aminotransferase, class I/classII; SPTR: Aminotransferase; IMG reference gene:2503958105; PFAM: Aminotransferase class I and II; class I and II aminotransferase complement(2115387..2116721) Sphaerochaeta coccoides DSM 17374 10496116 YP_004412370.1 CDS Spico_1790 NC_015436.1 2116721 2118871 R COGs: COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); HAMAP: NAD-dependent DNA ligase; InterProIPR001679:IPR013839:IPR004150:IPR004149:IPR 001357:IPR013840; KEGG: ssm:Spirs_1336 DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase, adenylation; NAD-dependent DNA ligase, OB-fold; Zinc-finger, NAD-dependent DNA ligase C4-type; BRCT; PRIAM: DNA ligase (NAD(+)); SMART: NAD-dependent DNA ligase, N-terminal; BRCT; SPTR: DNA ligase; TIGRFAM: NAD-dependent DNA ligase; IMG reference gene:2503958106; PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; NAD-dependent DNA ligase C4 zinc finger domain; BRCA1 C Terminus (BRCT) domain; TIGRFAM: DNA ligase, NAD-dependent; DNA ligase complement(2116721..2118871) Sphaerochaeta coccoides DSM 17374 10496117 YP_004412371.1 CDS Spico_1791 NC_015436.1 2119145 2119648 D KEGG: bcb:BCB4264_A2969 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503958107; hypothetical protein 2119145..2119648 Sphaerochaeta coccoides DSM 17374 10496118 YP_004412372.1 CDS Spico_1792 NC_015436.1 2119832 2121859 D COGs: COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs; InterPro IPR008274; KEGG: ssm:Spirs_1330 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; SPTR: Aldehyde oxidase and xanthine dehydrogenase; IMG reference gene:2503958108; PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; aldehyde oxidase 2119832..2121859 Sphaerochaeta coccoides DSM 17374 10496119 YP_004412373.1 CDS Spico_1793 NC_015436.1 2121862 2122410 D KEGG: gga:417314 dynein, axonemal, heavy chain 9; SPTR: GE19955; IMG reference gene:2503958109; hypothetical protein 2121862..2122410 Sphaerochaeta coccoides DSM 17374 10496120 YP_004412374.1 CDS Spico_1794 NC_015436.1 2122394 2123278 D COGs: COG1319 Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM/CutM homologs; InterPro IPR002346; KEGG: ssm:Spirs_1328 molybdopterin dehydrogenase FAD-binding protein; PFAM: Molybdopterin dehydrogenase, FAD-binding; SPTR: xanthine dehydrogenase subunit, FAD-binding domain protein; IMG reference gene:2503958110; PFAM: FAD binding domain in molybdopterin dehydrogenase; molybdopterin dehydrogenase FAD-binding protein 2122394..2123278 Sphaerochaeta coccoides DSM 17374 10496121 YP_004412375.1 CDS Spico_1795 NC_015436.1 2123351 2126863 D COGs: COG0587 DNA polymerase III alpha subunit; InterProIPR004805:IPR004013:IPR011708:IPR004365:IPR 003141; KEGG: ssm:Spirs_1327 DNA polymerase III, alpha subunit; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; PRIAM: DNA-directed DNA polymerase; SMART: Polymerase/histidinol phosphatase, N-terminal; SPTR: DNA polymerase III subunit alpha; TIGRFAM: DNA polymerase III, alpha subunit; IMG reference gene:2503958111; PFAM: Bacterial DNA polymerase III alpha subunit; PHP domain; TIGRFAM: DNA-directed DNA polymerase III (polc); DNA polymerase III subunit alpha 2123351..2126863 Sphaerochaeta coccoides DSM 17374 10496122 YP_004412376.1 CDS Spico_1796 NC_015436.1 2126872 2127507 D InterPro IPR003425; KEGG: ssm:Spirs_1326 protein of unknown function YGGT; PFAM: Uncharacterised protein family Ycf19; SPTR: uncharacterized protein; IMG reference gene:2503958112; PFAM: YGGT family; hypothetical protein 2126872..2127507 Sphaerochaeta coccoides DSM 17374 10496123 YP_004412377.1 CDS Spico_1797 NC_015436.1 2127543 2129642 D COGs: COG1200 RecG-like helicase; InterPro IPR004609:IPR011545:IPR001650:IPR014001; KEGG: ssm:Spirs_1325 ATP-dependent DNA helicase RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: ATP-dependent DNA helicase RecG; TIGRFAM: DNA helicase, ATP-dependent, RecG; IMG reference gene:2503958113; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG; ATP-dependent DNA helicase RecG 2127543..2129642 Sphaerochaeta coccoides DSM 17374 10496124 YP_004412378.1 CDS Spico_1798 NC_015436.1 2129783 2130385 D COGs: COG0742 N6-adenine-specific methylase; InterPro IPR004398; KEGG: ssm:Spirs_1324 methyltransferase; PFAM: RNA methyltransferase, RsmD; SPTR: Methyltransferase, ; TIGRFAM: RNA methyltransferase, RsmD; IMG reference gene:2503958114; PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family; methyltransferase 2129783..2130385 Sphaerochaeta coccoides DSM 17374 10496125 YP_004412379.1 CDS Spico_1799 NC_015436.1 2130378 2131250 D COGs: COG3884 Acyl-ACP thioesterase; InterPro IPR002864; KEGG: dvm:DvMF_1428 acyl-ACP thioesterase; PFAM: Acyl-ACP thioesterase; SPTR: Acyl-ACP thioesterase; IMG reference gene:2503958115; PFAM: Acyl-ACP thioesterase; acyl-ACP thioesterase 2130378..2131250 Sphaerochaeta coccoides DSM 17374 10496126 YP_004412380.1 CDS Spico_1800 NC_015436.1 2131271 2131477 R InterPro IPR007236; KEGG: abo:ABO_2672 hypothetical protein; PFAM: SlyX; SPTR: uncharacterized protein; IMG reference gene:2503958116; PFAM: SlyX; SlyX family protein complement(2131271..2131477) Sphaerochaeta coccoides DSM 17374 10496127 YP_004412381.1 CDS Spico_1801 NC_015436.1 2131667 2131831 D COGs: COG1773 Rubredoxin; InterPro IPR004039; KEGG: sta:STHERM_c04700 rubredoxin; PFAM: Rubredoxin-type Fe(Cys)4 protein; SPTR: Rubredoxin; IMG reference gene:2503958117; PFAM: Rubredoxin; rubredoxin-type Fe(Cys)4 protein 2131667..2131831 Sphaerochaeta coccoides DSM 17374 10496128 YP_004412382.1 CDS Spico_1802 NC_015436.1 2132195 2134396 D COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; IMG reference gene:2503958118; PFAM: Regulator of chromosome condensation (RCC1) repeat; hypothetical protein 2132195..2134396 Sphaerochaeta coccoides DSM 17374 10496129 YP_004412383.1 CDS Spico_1803 NC_015436.1 2134598 2135404 D COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: csh:Closa_0385 nitroreductase; PFAM: Nitroreductase-like; SPTR: Oxygen-insensitive NADPH nitroreductase; IMG reference gene:2503958119; PFAM: Nitroreductase; nitroreductase 2134598..2135404 Sphaerochaeta coccoides DSM 17374 10496130 YP_004412384.1 CDS Spico_1804 NC_015436.1 2135585 2136628 R COGs: COG1619 conserved hypothetical protein; InterPro IPR003507; KEGG: cbl:CLK_2168 LD-carboxypeptidase; PFAM: Peptidase S66, LD-carboxypeptidase A; SPTR: LD-carboxypeptidase; IMG reference gene:2503958120; PFAM: LD-carboxypeptidase; peptidase U61 complement(2135585..2136628) Sphaerochaeta coccoides DSM 17374 10496131 YP_004412385.1 CDS Spico_1805 NC_015436.1 2136784 2140320 R COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR011895:IPR002880:IPR019752:IPR019456:IPR 001450:IPR011766; KEGG: mta:Moth_0064 pyruvate:ferredoxin (flavodoxin) oxidoreductase; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; PRIAM: Pyruvate dehydrogenase (NADP(+)); SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain; SPTR: Pyruvate-flavodoxin oxidoreductase; TIGRFAM: Pyruvate-flavodoxin oxidoreductase; IMG reference gene:2503958121; PFAM: Domain of unknown function; domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; pyruvate ferredoxin/flavodoxin oxidoreductase complement(2136784..2140320) Sphaerochaeta coccoides DSM 17374 10496132 YP_004412386.1 CDS Spico_1806 NC_015436.1 2140502 2141578 R COGs: COG1363 Cellulase M and related protein; InterPro IPR008007; KEGG: amu:Amuc_1103 glutamyl aminopeptidase; PFAM: Peptidase M42; PRIAM: Glutamyl aminopeptidase; SPTR: Glutamyl aminopeptidase; IMG reference gene:2503958122; PFAM: M42 glutamyl aminopeptidase; glutamyl aminopeptidase complement(2140502..2141578) Sphaerochaeta coccoides DSM 17374 10496133 YP_004412387.1 CDS Spico_1807 NC_015436.1 2141773 2143245 R COGs: COG5476 conserved hypothetical protein; InterPro IPR015995:IPR010799; KEGG: ssm:Spirs_1401 microcystin LR degradation protein MlrC; PFAM: Microcystin LR degradation protein MlrC, N-terminal; Microcystin LR degradation protein MlrC, C-terminal; SPTR: MlrC domain protein; IMG reference gene:2503958123; PFAM: MlrC C-terminus; Protein of unknown function (DUF1485); microcystin LR degradation protein MlrC complement(2141773..2143245) Sphaerochaeta coccoides DSM 17374 10496134 YP_004412388.1 CDS Spico_1808 NC_015436.1 2143301 2144050 R COGs: COG3142 Uncharacterized protein involved in copper resistance; InterPro IPR005627; KEGG: ssm:Spirs_1399 CutC family protein; PFAM: CutC; SPTR: CutC family protein Copper transport; IMG reference gene:2503958124; PFAM: CutC family; CutC family protein complement(2143301..2144050) Sphaerochaeta coccoides DSM 17374 10496135 YP_004412389.1 CDS Spico_1809 NC_015436.1 2144298 2147234 D InterPro IPR002192; KEGG: ssm:Spirs_3995 response regulator receiver protein; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; SPTR: Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; IMG reference gene:2503958125; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate binding domain; pyruvate phosphate dikinase PEP/pyruvate-binding protein 2144298..2147234 Sphaerochaeta coccoides DSM 17374 10496136 YP_004412390.1 CDS Spico_1810 NC_015436.1 2147274 2148263 R COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307:IPR011418; KEGG: ssm:Spirs_0709 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase, TIM barrel domain; AP endonuclease, family 2, C-terminal; SPTR: uncharacterized protein; IMG reference gene:2503958126; PFAM: AP endonuclease 2 C terminus; Xylose isomerase-like TIM barrel; xylose isomerase domain-containing protein complement(2147274..2148263) Sphaerochaeta coccoides DSM 17374 10496137 YP_004412391.1 CDS Spico_1811 NC_015436.1 2148277 2149371 R COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: ssm:Spirs_0708 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Oxidoreductase domain protein; IMG reference gene:2503958127; PFAM: Oxidoreductase, NAD-binding Rossmann fold; Oxidoreductase, C-terminal alpha/beta domain; oxidoreductase domain-containing protein complement(2148277..2149371) Sphaerochaeta coccoides DSM 17374 10496138 YP_004412392.1 CDS Spico_1812 NC_015436.1 2149391 2150368 R COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: ssm:Spirs_0707 inner-membrane translocator; PFAM: ABC transporter permease; SPTR: Inner-membrane translocator; IMG reference gene:2503958128; PFAM: Branched-chain amino acid transport system / permease component; monosaccharide ABC transporter membrane protein, CUT2 family complement(2149391..2150368) Sphaerochaeta coccoides DSM 17374 10496139 YP_004412393.1 CDS Spico_1813 NC_015436.1 2150365 2151867 R COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: ssm:Spirs_0706 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; IMG reference gene:2503958129; PFAM: ABC transporter; monosaccharide ABC transporter ATP-binding protein, CUT2 family complement(2150365..2151867) Sphaerochaeta coccoides DSM 17374 10496140 YP_004412394.1 CDS Spico_1814 NC_015436.1 2151935 2152936 R COGs: COG1879 ABC-type sugar transport system periplasmic component; KEGG: ssm:Spirs_0705 periplasmic binding protein/LacI transcriptional regulator; SPTR: Periplasmic binding protein/LacI transcriptional regulator; IMG reference gene:2503958130; periplasmic binding protein/LacI transcriptional regulator complement(2151935..2152936) Sphaerochaeta coccoides DSM 17374 10496141 YP_004412395.1 CDS Spico_1815 NC_015436.1 2153184 2154239 D COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: ssm:Spirs_0704 transcriptional regulator, LacI family; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI; SPTR: HTH-type transcriptional repressor cytR; IMG reference gene:2503958131; PFAM: Bacterial regulatory proteins, lacI family; family; LacI family transcriptional regulator 2153184..2154239 Sphaerochaeta coccoides DSM 17374 10496142 YP_004412396.1 CDS Spico_1816 NC_015436.1 2155664 2156365 R COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: ssm:Spirs_4002 pseudouridine synthase; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Pseudouridine synthase; IMG reference gene:2503958132; PFAM: RNA pseudouridylate synthase; ribosomal large subunit pseudouridine synthase D complement(2155664..2156365) Sphaerochaeta coccoides DSM 17374 10496143 YP_004412397.1 CDS Spico_1817 NC_015436.1 2156362 2158365 R COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterPro IPR002205; KEGG: ssm:Spirs_4003 DNA topoisomerase (ATP-hydrolyzing); PFAM: DNA topoisomerase, type IIA, subunit A/C-terminal; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA topoisomerase, type IIA, subunit A/C-terminal; SPTR: Topoisomerase IV, A subunit, ; IMG reference gene:2503958133; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA topoisomerase IV subunit A complement(2156362..2158365) Sphaerochaeta coccoides DSM 17374 10496144 YP_004412398.1 CDS Spico_1818 NC_015436.1 2158365 2160185 R COGs: COG0187 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit; InterPro IPR003594:IPR013506:IPR001241; KEGG: ssm:Spirs_4004 DNA topoisomerase type IIA subunit B region 2 domain protein; PFAM: DNA topoisomerase, type IIA, subunit B, domain 2; ATPase-like, ATP-binding domain; SMART: DNA topoisomerase, type IIA, subunit B/N-terminal; ATPase-like, ATP-binding domain; SPTR: DNA topoisomerase 4 subunit B; IMG reference gene:2503958134; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; DNA topoisomerase IV subunit B complement(2158365..2160185) Sphaerochaeta coccoides DSM 17374 10496145 YP_004412399.1 CDS Spico_1819 NC_015436.1 2160264 2161187 R COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: fbl:Fbal_2937 MscS mechanosensitive ion channel; PFAM: Mechanosensitive ion channel MscS; SPTR: Small-conductance mechanosensitive channel; IMG reference gene:2503958135; PFAM: Mechanosensitive ion channel; mechanosensitive ion channel protein MscS complement(2160264..2161187) Sphaerochaeta coccoides DSM 17374 10496146 YP_004412400.1 CDS Spico_1820 NC_015436.1 2161265 2163145 R COGs: COG0326 Molecular chaperone HSP90 family; HAMAP: Chaperone protein HtpG; InterPro IPR001404:IPR003594:IPR020576; KEGG: ssm:Spirs_0285 heat shock protein HSP90; PFAM: Heat shock protein Hsp90, C-terminal; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; SPTR: Chaperone protein htpG; IMG reference gene:2503958136; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein; chaperone protein htpG complement(2161265..2163145) Sphaerochaeta coccoides DSM 17374 10496147 YP_004412401.1 CDS Spico_1821 NC_015436.1 2163172 2164440 D COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: tle:Tlet_1118 ROK family protein; PFAM: ROK; SPTR: ROK family protein; IMG reference gene:2503958137; PFAM: ROK family; ROK family protein 2163172..2164440 Sphaerochaeta coccoides DSM 17374 10496148 YP_004412402.1 CDS Spico_1822 NC_015436.1 2164587 2165135 R KEGG: sta:STHERM_c03850 GTP-binding protein; SPTR: GTP-binding protein; IMG reference gene:2503958138; GTP-binding protein complement(2164587..2165135) Sphaerochaeta coccoides DSM 17374 10496149 YP_004412403.1 CDS Spico_1823 NC_015436.1 2165264 2167174 R COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR006268:IPR006218:IPR001086:IPR002912; KEGG: ssm:Spirs_0275 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; Prephenate dehydratase; Amino acid-binding ACT; PRIAM: 3-deoxy-7-phosphoheptulonate synthase., Prephenate dehydratase; SPTR: uncharacterized protein; TIGRFAM: Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2; IMG reference gene:2503958139; PFAM: Prephenate dehydratase; ACT domain; DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; phospho-2-dehydro-3-deoxyheptonate aldolase complement(2165264..2167174) Sphaerochaeta coccoides DSM 17374 10496150 YP_004412404.1 CDS Spico_1824 NC_015436.1 2167306 2168019 D COGs: COG0177 EndoIII-related endonuclease; InterPro IPR003265:IPR003651; KEGG: dol:Dole_2166 DNA-(apurinic or apyrimidinic site) lyase; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SMART: HhH-GPD domain; SPTR: DNA-(Apurinic or apyrimidinic site) lyase; IMG reference gene:2503958140; PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: endonuclease III; DNA-(apurinic or apyrimidinic site) lyase 2167306..2168019 Sphaerochaeta coccoides DSM 17374 10496151 YP_004412405.1 CDS Spico_1825 NC_015436.1 2168116 2171016 R InterPro IPR011493; KEGG: avn:Avin_37890 filamentous hemagglutinin domain-containing protein; SPTR: Filamentous hemagglutinin domain-containing protein; IMG reference gene:2503958141; PFAM: The GLUG motif; hypothetical protein complement(2168116..2171016) Sphaerochaeta coccoides DSM 17374 10496152 YP_004412406.1 CDS Spico_1826 NC_015436.1 2171391 2171807 R KEGG: azl:AZL_026760 major facilitator transporter; SPTR: Major facilitator transporter; IMG reference gene:2503958142; major facilitator superfamily transporter complement(2171391..2171807) Sphaerochaeta coccoides DSM 17374 10496153 YP_004412407.1 CDS Spico_1827 NC_015436.1 2171869 2172174 R COGs: COG3323 conserved hypothetical protein; KEGG: pag:PLES_12181 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503958143; hypothetical protein complement(2171869..2172174) Sphaerochaeta coccoides DSM 17374 10496154 YP_004412408.1 CDS Spico_1828 NC_015436.1 2172228 2172800 D COGs: COG0193 Peptidyl-tRNA hydrolase; HAMAP: Peptidyl-tRNA hydrolase; InterPro IPR001328; KEGG: ssm:Spirs_0270 peptidyl-tRNA hydrolase; PFAM: Peptidyl-tRNA hydrolase; PRIAM: Aminoacyl-tRNA hydrolase; SPTR: Peptidyl-tRNA hydrolase; TIGRFAM: Peptidyl-tRNA hydrolase; IMG reference gene:2503958144; PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; Peptidyl-tRNA hydrolase 2172228..2172800 Sphaerochaeta coccoides DSM 17374 10496155 YP_004412409.1 CDS Spico_1829 NC_015436.1 2172877 2176317 D COGs: COG0366 Glycosidase; InterPro IPR006047:IPR006589; KEGG: ssm:Spirs_0266 alpha amylase catalytic region; PFAM: Glycosyl hydrolase, family 13, catalytic domain; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; SPTR: Alpha amylase catalytic region; IMG reference gene:2503958145; PFAM: Alpha amylase, catalytic domain; alpha amylase 2172877..2176317 Sphaerochaeta coccoides DSM 17374 10496156 YP_004412410.1 CDS Spico_1830 NC_015436.1 2176345 2177577 D COGs: COG1301 Na+/H+-dicarboxylate symporter; KEGG: ssm:Spirs_0263 transporter, SPTR: Transporter, ; IMG reference gene:2503958146; PFAM: Sodium:dicarboxylate symporter family; hypothetical protein 2176345..2177577 Sphaerochaeta coccoides DSM 17374 10496157 YP_004412411.1 CDS Spico_1831 NC_015436.1 2177578 2178381 D KEGG: rci:RRC456 Na(+)/H(+) antiporter; SPTR: uncharacterized protein; IMG reference gene:2503958147; hypothetical protein 2177578..2178381 Sphaerochaeta coccoides DSM 17374 10496158 YP_004412412.1 CDS Spico_1832 NC_015436.1 2178695 2180866 D COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; SPTR: Regulator of chromosome condensation, RCC1; IMG reference gene:2503958148; PFAM: Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 2178695..2180866 Sphaerochaeta coccoides DSM 17374 10496159 YP_004412413.1 CDS Spico_1833 NC_015436.1 2181035 2182804 R COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000587:IPR000994; KEGG: ssm:Spirs_0211 peptidase M24; PFAM: Peptidase M24, structural domain; Creatinase; SPTR: Peptidase, M24 family protein; IMG reference gene:2503958149; PFAM: Metallopeptidase M24; Creatinase/Prolidase N-terminal domain; peptidase M24 complement(2181035..2182804) Sphaerochaeta coccoides DSM 17374 10496160 YP_004412414.1 CDS Spico_1834 NC_015436.1 2182785 2183798 R COGs: COG0682 Prolipoprotein diacylglyceryltransferase; HAMAP: Prolipoprotein diacylglyceryl transferase; InterPro IPR001640; KEGG: ssm:Spirs_0157 prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase; SPTR: Prolipoprotein diacylglyceryl transferase; TIGRFAM: Prolipoprotein diacylglyceryl transferase; manually curated; IMG reference gene:2503958150; PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase complement(2182785..2183798) Sphaerochaeta coccoides DSM 17374 10496161 YP_004412415.1 CDS Spico_1835 NC_015436.1 2183934 2185373 D COGs: COG0793 Periplasmic protease; InterPro IPR004447:IPR001478:IPR005151; KEGG: ssm:Spirs_0153 carboxyl-terminal protease; PFAM: Peptidase S41; PDZ/DHR/GLGF; SMART: Peptidase S41; PDZ/DHR/GLGF; SPTR: Carboxy-terminal-processing protease; TIGRFAM: Peptidase S41A, C-terminal peptidase; IMG reference gene:2503958151; PFAM: Peptidase S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); carboxyl-terminal protease 2183934..2185373 Sphaerochaeta coccoides DSM 17374 10496162 YP_004412416.1 CDS Spico_1836 NC_015436.1 2185380 2186171 D COGs: COG1385 conserved hypothetical protein; InterPro IPR006700; KEGG: ssm:Spirs_0151 protein of unknown function DUF558; PFAM: Ribosomal RNA small subunit methyltransferase E; SPTR: RNA methyltransferase; TIGRFAM: Ribosomal RNA small subunit methyltransferase E; IMG reference gene:2503958152; PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family; Ribosomal RNA small subunit methyltransferase E 2185380..2186171 Sphaerochaeta coccoides DSM 17374 10496163 YP_004412417.1 CDS Spico_1837 NC_015436.1 2187040 2188236 R COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR010095:IPR001959; KEGG: xfm:Xfasm12_1563 transposase OrfB; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal; SPTR: Transposase OrfB; TIGRFAM: Transposase, IS605 OrfB, C-terminal; IMG reference gene:2503958159; PFAM: Helix-turn-helix domain; transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region; transposase, IS605 OrfB family complement(2187040..2188236) Sphaerochaeta coccoides DSM 17374 10496170 YP_004412418.1 CDS Spico_1838 NC_015436.1 2188230 2188853 R COGs: COG2452 site-specific integrase-resolvase; InterPro IPR000551:IPR006119; KEGG: xfm:Xfasm12_1564 hypothetical protein; PFAM: Resolvase, N-terminal; HTH transcriptional regulator, MerR; SMART: Resolvase, N-terminal; SPTR: uncharacterized protein; IMG reference gene:2503958160; PFAM: MerR family regulatory protein; Resolvase, N terminal domain; resolvase domain-containing protein complement(2188230..2188853) Sphaerochaeta coccoides DSM 17374 10496171 YP_004412419.1 CDS Spico_1839 NC_015436.1 2188899 2189468 R KEGG: har:HEAR2257 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503958161; hypothetical protein complement(2188899..2189468) Sphaerochaeta coccoides DSM 17374 10496172 YP_004412420.1 CDS Spico_1840 NC_015436.1 2189726 2191597 D COGs: COG2812 DNA polymerase III gamma/tau subunits; InterPro IPR012763:IPR003959:IPR003593; KEGG: ssm:Spirs_0088 DNA polymerase III, subunits gamma and tau; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; SPTR: uncharacterized protein; TIGRFAM: DNA polymerase III, subunit gamma/ tau; IMG reference gene:2503958162; PFAM: ATPase associated with various cellular activities (AAA); DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III, delta' subunit; DNA polymerase III, subunit gamma and tau; DNA polymerase III subunits gamma and tau 2189726..2191597 Sphaerochaeta coccoides DSM 17374 10496173 YP_004412421.1 CDS Spico_1841 NC_015436.1 2191594 2192184 D COGs: COG0353 Recombinational DNA repair protein (RecF pathway); HAMAP: RecR protein; InterPro IPR000093:IPR015967:IPR006171; KEGG: ssm:Spirs_0086 recombination protein RecR; PFAM: Toprim domain; Zinc finger C4-type, RecR; SMART: Toprim domain; SPTR: Recombination protein recR; TIGRFAM: RecR protein; IMG reference gene:2503958163; PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR; DNA replication and repair protein RecR 2191594..2192184 Sphaerochaeta coccoides DSM 17374 10496174 YP_004412422.1 CDS Spico_1842 NC_015436.1 2192435 2193892 D KEGG: coc:Coch_0352 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503958164; hypothetical protein 2192435..2193892 Sphaerochaeta coccoides DSM 17374 10496175 YP_004412423.1 CDS Spico_1843 NC_015436.1 2193983 2194366 D KEGG: pfh:PFHG_02927 conserved hypothetical protein; SPTR: Conserved Plasmodium protein; IMG reference gene:2503958165; hypothetical protein 2193983..2194366 Sphaerochaeta coccoides DSM 17374 10496176 YP_004412424.1 CDS Spico_1844 NC_015436.1 2194451 2195293 R COGs: COG3717 5-keto 4-deoxyuronate isomerase; HAMAP: 5-keto 4-deoxyuronate isomerase; InterPro IPR007045:IPR021120; KEGG: csh:Closa_3486 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; PFAM: KduI/IolB isomerase; PRIAM: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; SPTR: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; IMG reference gene:2503958166; PFAM: KduI/IolB family; 4-deoxy-L-threo-5-hexulose uronate isomerase complement(2194451..2195293) Sphaerochaeta coccoides DSM 17374 10496177 YP_004412425.1 CDS Spico_1845 NC_015436.1 2195312 2196115 R COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: snt:SPT_0369 gluconate 5-dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: Gluconate 5-dehydrogenase; SPTR: Gluconate 5-dehydrogenase (5-keto-D-gluconate 5-reductase); IMG reference gene:2503958167; PFAM: short chain dehydrogenase; gluconate 5-dehydrogenase complement(2195312..2196115) Sphaerochaeta coccoides DSM 17374 10496178 YP_004412426.1 CDS Spico_1846 NC_015436.1 2196296 2197144 R COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterPro IPR001623; KEGG: dat:HRM2_24840 DjlA; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal; SPTR: DjlA; IMG reference gene:2503958168; PFAM: DnaJ domain; Tellurite resistance protein TerB; molecular chaperone DnaJ complement(2196296..2197144) Sphaerochaeta coccoides DSM 17374 10496179 YP_004412427.1 CDS Spico_1847 NC_015436.1 2197189 2198622 R COGs: COG1626 Neutral trehalase; KEGG: ssm:Spirs_0085 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503958169; PFAM: Trehalase; hypothetical protein complement(2197189..2198622) Sphaerochaeta coccoides DSM 17374 10496180 YP_004412428.1 CDS Spico_1848 NC_015436.1 2198781 2199710 R COGs: COG1597 Sphingosine kinase; InterPro IPR001206:IPR005218; KEGG: ssm:Spirs_3801 diacylglycerol kinase catalytic region; PFAM: Diacylglycerol kinase, catalytic domain; SMART: Diacylglycerol kinase, catalytic domain; SPTR: Diacylglycerol kinase catalytic region; TIGRFAM: Diacylglycerol/lipid kinase; IMG reference gene:2503958170; PFAM: Diacylglycerol kinase catalytic domain; TIGRFAM: lipid kinase, YegS/Rv2252/BmrU family; hypothetical protein complement(2198781..2199710) Sphaerochaeta coccoides DSM 17374 10496181 YP_004412429.1 CDS Spico_1849 NC_015436.1 2199813 2201246 D COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: ssm:Spirs_0042 MATE efflux family protein; PFAM: Multi antimicrobial extrusion protein; SPTR: MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein; IMG reference gene:2503958171; PFAM: MatE; TIGRFAM: efflux protein, MATE family; MATE efflux family protein 2199813..2201246 Sphaerochaeta coccoides DSM 17374 10496182 YP_004412430.1 CDS Spico_1850 NC_015436.1 2201307 2202482 D COGs: COG1820 N-acetylglucosamine-6-phosphate deacetylase; InterPro IPR006680:IPR003764; KEGG: ssm:Spirs_1362 N-acetylglucosamine-6-phosphate deacetylase; PFAM: Amidohydrolase 1; PRIAM: N-acetylglucosamine-6-phosphate deacetylase; SPTR: N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; IMG reference gene:2503958172; PFAM: Amidohydrolase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; N-acetylglucosamine-6-phosphate deacetylase 2201307..2202482 Sphaerochaeta coccoides DSM 17374 10496183 YP_004412431.1 CDS Spico_1851 NC_015436.1 2202547 2204034 D COGs: COG2195 Di- and tripeptidase; InterPro IPR002933:IPR011650:IPR001160; KEGG: ssm:Spirs_0034 aminoacyl-histidine dipeptidase; PFAM: Peptidase M20, dimerisation; Peptidase M20; PRIAM: Xaa-His dipeptidase; SPTR: Aminoacyl-histidine dipeptidase; TIGRFAM: Peptidase M20C, Xaa-His dipeptidase; IMG reference gene:2503958173; PFAM: Peptidase M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: aminoacyl-histidine dipeptidase; aminoacyl-histidine dipeptidase 2202547..2204034 Sphaerochaeta coccoides DSM 17374 10496184 YP_004412432.1 CDS Spico_1852 NC_015436.1 2204385 2206565 D COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; IMG reference gene:2503958174; PFAM: Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 2204385..2206565 Sphaerochaeta coccoides DSM 17374 10496185 YP_004412433.1 CDS Spico_1853 NC_015436.1 2206750 2207970 D COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: ssm:Spirs_0330 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: uncharacterized protein; IMG reference gene:2503958175; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; phospholipid/glycerol acyltransferase 2206750..2207970 Sphaerochaeta coccoides DSM 17374 10496186 YP_004412434.1 CDS Spico_1854 NC_015436.1 2207970 2209406 D COGs: COG0786 Na+/glutamate symporter; KEGG: ssm:Spirs_2474 Na+/glutamate symporter-like protein; SPTR: Na+/glutamate symporter-like protein; IMG reference gene:2503958176; Na+/glutamate symporter-like protein 2207970..2209406 Sphaerochaeta coccoides DSM 17374 10496187 YP_004412435.1 CDS Spico_1855 NC_015436.1 2209771 2212146 D COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR011110:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; Listeria/Bacterioides repeat; Two component regulator propeller; SPTR: uncharacterized protein; IMG reference gene:2503958177; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 2209771..2212146 Sphaerochaeta coccoides DSM 17374 10496188 YP_004412436.1 CDS Spico_1856 NC_015436.1 2212314 2213534 R COGs: COG0426 flavoprotein; InterPro IPR001279:IPR008254; KEGG: ssm:Spirs_0020 uncharacterized flavoprotein; PFAM: Beta-lactamase-like; Flavodoxin/nitric oxide synthase; SMART: Beta-lactamase-like; SPTR: Beta-lactamase-like; IMG reference gene:2503958178; PFAM: Metallo-beta-lactamase superfamily; Flavodoxin; beta-lactamase domain-containing protein complement(2212314..2213534) Sphaerochaeta coccoides DSM 17374 10496189 YP_004412437.1 CDS Spico_1857 NC_015436.1 2213791 2214546 R COGs: COG1451 metal-dependent hydrolase; InterPro IPR002725; KEGG: abo:ABO_2745 hypothetical protein; PFAM: Protein of unknown function DUF45; SPTR: uncharacterized protein; IMG reference gene:2503958179; PFAM: Protein of unknown function DUF45; hypothetical protein complement(2213791..2214546) Sphaerochaeta coccoides DSM 17374 10496190 YP_004412438.1 CDS Spico_1858 NC_015436.1 2214549 2215535 R COGs: COG2431 membrane protein; InterPro IPR005642; KEGG: ssm:Spirs_0011 protein of unknown function DUF340 membrane; PFAM: Protein of unknown function DUF340, prokaryotic membrane; SPTR: surface protein; IMG reference gene:2503958180; PFAM: Membrane protein of unknown function (DUF340); hypothetical protein complement(2214549..2215535) Sphaerochaeta coccoides DSM 17374 10496191 YP_004412439.1 CDS Spico_1859 NC_015436.1 2215596 2216834 D COGs: COG1916 Uncharacterized homolog of PrgY (pheromone shutdown protein); InterPro IPR002816:IPR005230; KEGG: ssm:Spirs_4297 TraB family protein; PFAM: Pheromone shutdown-related, TraB; SPTR: TraB family protein; TIGRFAM: Pheromone shutdown, TraB; IMG reference gene:2503958181; PFAM: TraB family; TIGRFAM: pheromone shutdown-related protein TraB; TraB family protein 2215596..2216834 Sphaerochaeta coccoides DSM 17374 10496192 YP_004412440.1 CDS Spico_1860 NC_015436.1 2216848 2218212 R COGs: COG1066 ATP-dependent serine protease; InterPro IPR004504:IPR003593; KEGG: ssm:Spirs_4298 DNA repair protein RadA; SMART: ATPase, AAA+ type, core; SPTR: DNA repair protein radA; TIGRFAM: DNA repair protein RadA; IMG reference gene:2503958182; PFAM: KaiC; TIGRFAM: DNA repair protein RadA; DNA repair protein RadA complement(2216848..2218212) Sphaerochaeta coccoides DSM 17374 10496193 YP_004412441.1 CDS Spico_1861 NC_015436.1 2218235 2219182 R COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; InterPro IPR002130:IPR001179; KEGG: dps:DP1645 peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; Peptidyl-prolyl cis-trans isomerase, FKBP-type; PRIAM: Peptidylprolyl isomerase; SPTR: Probable peptidyl-prolyl cis-trans isomerase; IMG reference gene:2503958183; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; Peptidylprolyl isomerase complement(2218235..2219182) Sphaerochaeta coccoides DSM 17374 10496194 YP_004412442.1 CDS Spico_1862 NC_015436.1 2219257 2220216 R COGs: COG1475 transcriptional regulator protein; InterPro IPR003115:IPR004437; KEGG: ssm:Spirs_4300 ParB-like partition protein; PFAM: ParB-like nuclease; SMART: ParB-like nuclease; SPTR: ParB family protein; TIGRFAM: ParB-like partition protein; IMG reference gene:2503958184; PFAM: ParB-like nuclease domain; KorB domain; TIGRFAM: ParB-like partition proteins; parB-like partition protein complement(2219257..2220216) Sphaerochaeta coccoides DSM 17374 10496195 YP_004412443.1 CDS Spico_1863 NC_015436.1 2220203 2220967 R COGs: COG1192 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: ssm:Spirs_4301 cobyrinic acid ac-diamide synthase; PFAM: Cobyrinic acid a,c-diamide synthase; SPTR: uncharacterized protein; IMG reference gene:2503958185; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; chromosome segregation ATPase complement(2220203..2220967) Sphaerochaeta coccoides DSM 17374 10496196 YP_004412444.1 CDS Spico_1864 NC_015436.1 2221165 2221401 D COGs: COG0694 Thioredoxin-like protein and domains; InterPro IPR001075; KEGG: ssm:Spirs_4302 nitrogen-fixing NifU domain protein; PFAM: NIF system FeS cluster assembly, NifU, C-terminal; SPTR: Nitrogen-fixing NifU domain protein; IMG reference gene:2503958186; PFAM: NifU-like domain; nitrogen-fixing NifU domain-containing protein 2221165..2221401 Sphaerochaeta coccoides DSM 17374 10496197 YP_004412445.1 CDS Spico_1865 NC_015436.1 2222631 2225156 R COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterPro IPR002205:IPR006691:IPR005743; KEGG: ssm:Spirs_4305 DNA gyrase, A subunit; PFAM: DNA topoisomerase, type IIA, subunit A/C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA topoisomerase, type IIA, subunit A/C-terminal; SPTR: DNA gyrase, A subunit; TIGRFAM: DNA gyrase, subunit A; IMG reference gene:2503958187; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit; DNA gyrase subunit A complement(2222631..2225156) Sphaerochaeta coccoides DSM 17374 10496198 YP_004412446.1 CDS Spico_1866 NC_015436.1 2225153 2227135 R COGs: COG0187 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit; InterProIPR003594:IPR013506:IPR006171:IPR002288:IPR 011557:IPR001241; KEGG: ssm:Spirs_4306 DNA gyrase, B subunit; PFAM: DNA topoisomerase, type IIA, subunit B, domain 2; ATPase-like, ATP-binding domain; Toprim domain; DNA topoisomerase, type IIA, subunit B, C-terminal; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA topoisomerase, type IIA, subunit B/N-terminal; ATPase-like, ATP-binding domain; SPTR: DNA gyrase subunit B; TIGRFAM: DNA gyrase, subunit B; IMG reference gene:2503958188; PFAM: Toprim domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit; DNA gyrase subunit B complement(2225153..2227135) Sphaerochaeta coccoides DSM 17374 10496199 Spico_R0001 tRNA Spico_R0001 NC_015436.1 216426 216498 R tRNA-Ala complement(216426..216498) Sphaerochaeta coccoides DSM 17374 10494464 Spico_R0003 tRNA Spico_R0003 NC_015436.1 246652 246728 D tRNA-Ile 246652..246728 Sphaerochaeta coccoides DSM 17374 10494500 Spico_R0006 tRNA Spico_R0006 NC_015436.1 302468 302539 D tRNA-Gly 302468..302539 Sphaerochaeta coccoides DSM 17374 10494552 Spico_R0007 tRNA Spico_R0007 NC_015436.1 317369 317442 D tRNA-Asp 317369..317442 Sphaerochaeta coccoides DSM 17374 10494564 Spico_R0008 tRNA Spico_R0008 NC_015436.1 331021 331104 R tRNA-Leu complement(331021..331104) Sphaerochaeta coccoides DSM 17374 10494579 Spico_R0009 tRNA Spico_R0009 NC_015436.1 346445 346517 R tRNA-Pro complement(346445..346517) Sphaerochaeta coccoides DSM 17374 10494592 Spico_R0010 tRNA Spico_R0010 NC_015436.1 424435 424506 R tRNA-Val complement(424435..424506) Sphaerochaeta coccoides DSM 17374 10494651 Spico_R0011 tRNA Spico_R0011 NC_015436.1 438406 438477 R tRNA-Val complement(438406..438477) Sphaerochaeta coccoides DSM 17374 10494662 Spico_R0012 tRNA Spico_R0012 NC_015436.1 482665 482737 D tRNA-Met 482665..482737 Sphaerochaeta coccoides DSM 17374 10494695 Spico_R0013 tRNA Spico_R0013 NC_015436.1 532396 532467 D tRNA-Val 532396..532467 Sphaerochaeta coccoides DSM 17374 10494736 Spico_R0014 tRNA Spico_R0014 NC_015436.1 569803 569874 D tRNA-Gly 569803..569874 Sphaerochaeta coccoides DSM 17374 10494775 Spico_R0015 tRNA Spico_R0015 NC_015436.1 636444 636517 D tRNA-Thr 636444..636517 Sphaerochaeta coccoides DSM 17374 10494840 Spico_R0018 tRNA Spico_R0018 NC_015436.1 717839 717920 R tRNA-Tyr complement(717839..717920) Sphaerochaeta coccoides DSM 17374 10494912 Spico_R0019 tRNA Spico_R0019 NC_015436.1 723124 723195 R tRNA-Glu complement(723124..723195) Sphaerochaeta coccoides DSM 17374 10494917 Spico_R0020 tRNA Spico_R0020 NC_015436.1 723206 723276 R tRNA-Gln complement(723206..723276) Sphaerochaeta coccoides DSM 17374 10494918 Spico_R0021 tRNA Spico_R0021 NC_015436.1 725462 725533 R tRNA-Thr complement(725462..725533) Sphaerochaeta coccoides DSM 17374 10494922 Spico_R0024 tRNA Spico_R0024 NC_015436.1 772098 772171 R tRNA-Ala complement(772098..772171) Sphaerochaeta coccoides DSM 17374 10494960 Spico_R0026 tRNA Spico_R0026 NC_015436.1 784901 784972 R tRNA-Glu complement(784901..784972) Sphaerochaeta coccoides DSM 17374 10494971 Spico_R0027 tRNA Spico_R0027 NC_015436.1 785016 785088 R tRNA-Lys complement(785016..785088) Sphaerochaeta coccoides DSM 17374 10494972 Spico_R0030 tRNA Spico_R0030 NC_015436.1 882848 882921 R tRNA-Ala complement(882848..882921) Sphaerochaeta coccoides DSM 17374 10495053 Spico_R0032 tRNA Spico_R0032 NC_015436.1 901564 901637 R tRNA-Pro complement(901564..901637) Sphaerochaeta coccoides DSM 17374 10495073 Spico_R0033 tRNA Spico_R0033 NC_015436.1 930684 930755 D tRNA-His 930684..930755 Sphaerochaeta coccoides DSM 17374 10495098 Spico_R0034 tRNA Spico_R0034 NC_015436.1 930788 930861 D tRNA-Arg 930788..930861 Sphaerochaeta coccoides DSM 17374 10495099 Spico_R0035 tRNA Spico_R0035 NC_015436.1 930900 930972 D tRNA-Lys 930900..930972 Sphaerochaeta coccoides DSM 17374 10495100 Spico_R0036 tRNA Spico_R0036 NC_015436.1 931010 931091 D tRNA-Leu 931010..931091 Sphaerochaeta coccoides DSM 17374 10495101 Spico_R0037 tRNA Spico_R0037 NC_015436.1 931128 931202 D tRNA-Gly 931128..931202 Sphaerochaeta coccoides DSM 17374 10495102 Spico_R0038 tRNA Spico_R0038 NC_015436.1 939865 939938 D tRNA-Arg 939865..939938 Sphaerochaeta coccoides DSM 17374 10495110 Spico_R0039 tRNA Spico_R0039 NC_015436.1 974692 974775 R tRNA-Leu complement(974692..974775) Sphaerochaeta coccoides DSM 17374 10495154 Spico_R0040 tRNA Spico_R0040 NC_015436.1 975497 975569 R tRNA-Pro complement(975497..975569) Sphaerochaeta coccoides DSM 17374 10495156 Spico_R0041 tRNA Spico_R0041 NC_015436.1 1070004 1070087 R tRNA-Leu complement(1070004..1070087) Sphaerochaeta coccoides DSM 17374 10495238 Spico_R0042 tRNA Spico_R0042 NC_015436.1 1114176 1114251 D tRNA-Asn 1114176..1114251 Sphaerochaeta coccoides DSM 17374 10495279 Spico_R0043 tRNA Spico_R0043 NC_015436.1 1127778 1127850 D tRNA-Gln 1127778..1127850 Sphaerochaeta coccoides DSM 17374 10495291 Spico_R0044 tRNA Spico_R0044 NC_015436.1 1258904 1258980 D tRNA-Arg 1258904..1258980 Sphaerochaeta coccoides DSM 17374 10495411 Spico_R0045 tRNA Spico_R0045 NC_015436.1 1274162 1274234 D tRNA-Phe 1274162..1274234 Sphaerochaeta coccoides DSM 17374 10495423 Spico_R0046 tRNA Spico_R0046 NC_015436.1 1364822 1364897 D tRNA-Met 1364822..1364897 Sphaerochaeta coccoides DSM 17374 10495495 Spico_R0047 tRNA Spico_R0047 NC_015436.1 1479645 1479718 D tRNA-Arg 1479645..1479718 Sphaerochaeta coccoides DSM 17374 10495591 Spico_R0048 tRNA Spico_R0048 NC_015436.1 1523230 1523301 D tRNA-Cys 1523230..1523301 Sphaerochaeta coccoides DSM 17374 10495625 Spico_R0049 tRNA Spico_R0049 NC_015436.1 1541991 1542066 R tRNA-Ala complement(1541991..1542066) Sphaerochaeta coccoides DSM 17374 10495644 Spico_R0050 tRNA Spico_R0050 NC_015436.1 1692768 1692851 D tRNA-Leu 1692768..1692851 Sphaerochaeta coccoides DSM 17374 10495762 Spico_R0051 tRNA Spico_R0051 NC_015436.1 1762091 1762164 D tRNA-Met 1762091..1762164 Sphaerochaeta coccoides DSM 17374 10495816 Spico_R0052 tRNA Spico_R0052 NC_015436.1 2035061 2035134 R tRNA-Trp complement(2035061..2035134) Sphaerochaeta coccoides DSM 17374 10496054 Spico_R0053 tRNA Spico_R0053 NC_015436.1 2035402 2035474 R tRNA-Thr complement(2035402..2035474) Sphaerochaeta coccoides DSM 17374 10496056 Spico_R0054 tRNA Spico_R0054 NC_015436.1 2186256 2186340 D tRNA-Ser 2186256..2186340 Sphaerochaeta coccoides DSM 17374 10496164 Spico_R0055 tRNA Spico_R0055 NC_015436.1 2186381 2186467 D tRNA-Ser 2186381..2186467 Sphaerochaeta coccoides DSM 17374 10496165 Spico_R0056 tRNA Spico_R0056 NC_015436.1 2186493 2186569 D tRNA-Arg 2186493..2186569 Sphaerochaeta coccoides DSM 17374 10496166 Spico_R0057 tRNA Spico_R0057 NC_015436.1 2186583 2186669 D tRNA-Ser 2186583..2186669 Sphaerochaeta coccoides DSM 17374 10496167 Spico_R0058 tRNA Spico_R0058 NC_015436.1 2186710 2186795 D tRNA-Ser 2186710..2186795 Sphaerochaeta coccoides DSM 17374 10496168 Spico_R0002 rRNA Spico_R0002 NC_015436.1 244990 246512 D 16S ribosomal RNA 244990..246512 Sphaerochaeta coccoides DSM 17374 10494499 Spico_R0004 rRNA Spico_R0004 NC_015436.1 246811 249774 D 23S ribosomal RNA 246811..249774 Sphaerochaeta coccoides DSM 17374 10494501 Spico_R0005 rRNA Spico_R0005 NC_015436.1 249851 249962 D 5S ribosomal RNA 249851..249962 Sphaerochaeta coccoides DSM 17374 10494502 Spico_R0022 rRNA Spico_R0022 NC_015436.1 768900 769011 R 5S ribosomal RNA complement(768900..769011) Sphaerochaeta coccoides DSM 17374 10494958 Spico_R0023 rRNA Spico_R0023 NC_015436.1 769088 772051 R 23S ribosomal RNA complement(769088..772051) Sphaerochaeta coccoides DSM 17374 10494959 Spico_R0025 rRNA Spico_R0025 NC_015436.1 772316 773838 R 16S ribosomal RNA complement(772316..773838) Sphaerochaeta coccoides DSM 17374 10494961 Spico_R0028 rRNA Spico_R0028 NC_015436.1 879650 879761 R 5S ribosomal RNA complement(879650..879761) Sphaerochaeta coccoides DSM 17374 10495051 Spico_R0029 rRNA Spico_R0029 NC_015436.1 879838 882801 R 23S ribosomal RNA complement(879838..882801) Sphaerochaeta coccoides DSM 17374 10495052 Spico_R0031 rRNA Spico_R0031 NC_015436.1 883066 884588 R 16S ribosomal RNA complement(883066..884588) Sphaerochaeta coccoides DSM 17374 10495054