-- dump date 20140620_072333 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_004410625.1 330835984 10496200 113..1525 1 NC_015436.1 COGs: COG0593 ATPase involved in DNA replication initiation; HAMAP: Chromosomal replication control, initiator DnaA; InterPro IPR001957:IPR013317:IPR013159:IPR003593; KEGG: ssm:Spirs_0001 chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda); Chromosomal replication initiator, DnaA C-terminal; SMART: Chromosomal replication initiator, DnaA C-terminal; ATPase, AAA+ type, core; SPTR: Chromosomal replication initiator protein DnaA; TIGRFAM: Chromosomal replication control, initiator DnaA; IMG reference gene:2503956265; PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA; chromosome replication initiator DnaA 1525 10496200 Spico_0001 Sphaerochaeta coccoides DSM 17374 chromosome replication initiator DnaA YP_004410625.1 113 D 760011 CDS YP_004410626.1 330835985 10494277 1780..2895 1 NC_015436.1 COGs: COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); InterPro IPR001001:IPR022634:IPR022637:IPR022635; KEGG: ssm:Spirs_0003 DNA polymerase III, beta subunit; PFAM: DNA polymerase III, beta chain, central; DNA polymerase III, beta chain, N-terminal; DNA polymerase III, beta chain, C-terminal; PRIAM: DNA-directed DNA polymerase; SMART: DNA polymerase III, beta chain; SPTR: DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta chain; IMG reference gene:2503956266; PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit; DNA polymerase III subunit beta 2895 10494277 Spico_0002 Sphaerochaeta coccoides DSM 17374 DNA polymerase III subunit beta YP_004410626.1 1780 D 760011 CDS YP_004410627.1 330835986 10494278 2895..3974 1 NC_015436.1 COGs: COG1195 Recombinational DNA repair ATPase (RecF pathway); HAMAP: DNA-binding, RecF; InterPro IPR001238:IPR003395; KEGG: ssm:Spirs_0004 DNA replication and repair protein RecF; PFAM: RecF/RecN/SMC; SPTR: DNA replication and repair protein recF; TIGRFAM: DNA-binding, RecF; IMG reference gene:2503956267; PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein; DNA replication and repair protein RecF 3974 10494278 Spico_0003 Sphaerochaeta coccoides DSM 17374 DNA replication and repair protein RecF YP_004410627.1 2895 D 760011 CDS YP_004410628.1 330835987 10494279 3971..4300 1 NC_015436.1 InterPro IPR007922; KEGG: ssm:Spirs_0005 protein of unknown function DUF721; PFAM: Protein of unknown function DUF721/UPF0232; SPTR: uncharacterized protein; IMG reference gene:2503956268; PFAM: Protein of unknown function (DUF721); hypothetical protein 4300 10494279 Spico_0004 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410628.1 3971 D 760011 CDS YP_004410629.1 330835988 10494280 4444..4611 1 NC_015436.1 HAMAP: Ribosomal protein L34; InterPro IPR000271; KEGG: ssm:Spirs_0006 ribosomal protein L34; PFAM: Ribosomal protein L34; SPTR: 50S ribosomal protein L34; TIGRFAM: Ribosomal protein L34; IMG reference gene:2503956269; PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; 50S ribosomal protein L34 4611 10494280 Spico_0005 Sphaerochaeta coccoides DSM 17374 50S ribosomal protein L34 YP_004410629.1 4444 D 760011 CDS YP_004410630.1 330835989 10494281 4592..4942 1 NC_015436.1 HAMAP: Ribonuclease P; InterPro IPR000100; KEGG: ssm:Spirs_0007 ribonuclease P protein component; PFAM: Ribonuclease P; SPTR: Ribonuclease P protein component; TIGRFAM: Ribonuclease P; IMG reference gene:2503956270; PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial; Ribonuclease P protein component 4942 10494281 Spico_0006 Sphaerochaeta coccoides DSM 17374 Ribonuclease P protein component YP_004410630.1 4592 D 760011 CDS YP_004410631.1 330835990 10494282 5038..6852 1 NC_015436.1 COGs: COG0706 Preprotein translocase subunit YidC; HAMAP: Membrane insertion protein, OxaA/YidC, bacterial; InterPro IPR019998:IPR001708; KEGG: ssm:Spirs_0008 membrane protein insertase, YidC/Oxa1 family; PFAM: Membrane insertion protein, OxaA/YidC; SPTR: uncharacterized protein; TIGRFAM: Membrane insertion protein, OxaA/YidC; Membrane insertion protein, OxaA/YidC, bacterial; IMG reference gene:2503956271; PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain; membrane protein insertase, YidC/Oxa1 family, N-terminal domain; membrane protein OxaA 6852 10494282 Spico_0007 Sphaerochaeta coccoides DSM 17374 membrane protein OxaA YP_004410631.1 5038 D 760011 CDS YP_004410632.1 330835991 10494283 6904..7611 1 NC_015436.1 COGs: COG1847 RNA-binding protein; InterPro IPR001374; KEGG: ssm:Spirs_0009 single-stranded nucleic acid binding R3H domain protein; PFAM: Single-stranded nucleic acid binding R3H; SMART: Single-stranded nucleic acid binding R3H; SPTR: Protein jag; IMG reference gene:2503956272; PFAM: R3H domain; single-stranded nucleic acid binding R3H domain-containing protein 7611 10494283 Spico_0008 Sphaerochaeta coccoides DSM 17374 single-stranded nucleic acid binding R3H domain-containing protein YP_004410632.1 6904 D 760011 CDS YP_004410633.1 330835992 10494284 7893..8837 1 NC_015436.1 COGs: COG0169 Shikimate 5-dehydrogenase; KEGG: art:Arth_1802 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956273; hypothetical protein 8837 10494284 Spico_0009 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410633.1 7893 D 760011 CDS YP_004410634.1 330835993 10494285 8880..9458 1 NC_015436.1 COGs: COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzyme; InterPro IPR010551; KEGG: art:Arth_1801 glucose-6-phosphate isomerase; PFAM: Glucose-6-phosphate isomerase, prokaryote; PRIAM: Glucose-6-phosphate isomerase; SPTR: Glucose-6-phosphate isomerase; IMG reference gene:2503956274; PFAM: Glucose-6-phosphate isomerase (GPI); glucose-6-phosphate isomerase 9458 10494285 Spico_0010 Sphaerochaeta coccoides DSM 17374 glucose-6-phosphate isomerase YP_004410634.1 8880 D 760011 CDS YP_004410635.1 330835994 10494286 9533..10429 1 NC_015436.1 COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; KEGG: art:Arth_1808 Zn-dependent hydrolases of the beta-lactamase fold-like protein; SPTR: Zn-dependent hydrolases of the beta-lactamase fold-like protein; IMG reference gene:2503956275; Zn-dependent hydrolase of the beta-lactamase fold-like protein 10429 10494286 Spico_0011 Sphaerochaeta coccoides DSM 17374 Zn-dependent hydrolase of the beta-lactamase fold-like protein YP_004410635.1 9533 D 760011 CDS YP_004410636.1 330835995 10494287 10437..11204 1 NC_015436.1 COGs: COG2188 Transcriptional regulators; InterPro IPR000524:IPR011663; KEGG: tna:CTN_0371 transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; SMART: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; SPTR: Transcriptional regulator, GntR family; IMG reference gene:2503956276; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain; GntR family transcriptional regulator 11204 10494287 Spico_0012 Sphaerochaeta coccoides DSM 17374 GntR family transcriptional regulator YP_004410636.1 10437 D 760011 CDS YP_004410637.1 330835996 10494288 11610..13475 1 NC_015436.1 COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterPro IPR002078:IPR002197:IPR003593; KEGG: dma:DMR_16710 fis family transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core; SPTR: Sigma-54 interaction domain family protein; IMG reference gene:2503956277; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; Fis family transcriptional regulator 13475 10494288 Spico_0013 Sphaerochaeta coccoides DSM 17374 Fis family transcriptional regulator YP_004410637.1 11610 D 760011 CDS YP_004410638.1 330835997 10494289 13724..14755 1 NC_015436.1 COGs: COG1879 ABC-type sugar transport system periplasmic component; KEGG: tle:Tlet_0182 periplasmic binding protein/LacI transcriptional regulator; SPTR: Periplasmic binding protein/LacI transcriptional regulator; IMG reference gene:2503956278; PFAM: family; periplasmic binding protein/LacI transcriptional regulator 14755 10494289 Spico_0014 Sphaerochaeta coccoides DSM 17374 periplasmic binding protein/LacI transcriptional regulator YP_004410638.1 13724 D 760011 CDS YP_004410639.1 330835998 10494290 14856..16349 1 NC_015436.1 COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: csh:Closa_1201 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; IMG reference gene:2503956279; PFAM: ABC transporter; monosaccharide-transporting ATPase 16349 10494290 Spico_0015 Sphaerochaeta coccoides DSM 17374 monosaccharide-transporting ATPase YP_004410639.1 14856 D 760011 CDS YP_004410640.1 330835999 10494291 16392..17339 1 NC_015436.1 COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: tle:Tlet_0185 monosaccharide-transporting ATPase; PFAM: ABC transporter permease; SPTR: Monosaccharide-transporting ATPase; IMG reference gene:2503956280; PFAM: Branched-chain amino acid transport system / permease component; monosaccharide ABC transporter membrane protein, CUT2 family 17339 10494291 Spico_0016 Sphaerochaeta coccoides DSM 17374 monosaccharide ABC transporter membrane protein, CUT2 family YP_004410640.1 16392 D 760011 CDS YP_004410641.1 330836000 10494292 17397..18896 1 NC_015436.1 COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484:IPR018485; KEGG: bth:BT_4423 xylulose kinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; PRIAM: Xylulokinase; SPTR: Xylulokinase; IMG reference gene:2503956281; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; Xylulokinase 18896 10494292 Spico_0017 Sphaerochaeta coccoides DSM 17374 Xylulokinase YP_004410641.1 17397 D 760011 CDS YP_004410642.1 330836001 10494293 18965..20515 1 NC_015436.1 COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484:IPR018485; KEGG: bth:BT_4423 xylulose kinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; SPTR: Xylulokinase; IMG reference gene:2503956282; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; Carbohydrate kinase, FGGY 20515 10494293 Spico_0018 Sphaerochaeta coccoides DSM 17374 Carbohydrate kinase, FGGY YP_004410642.1 18965 D 760011 CDS YP_004410643.1 330836002 10494294 20502..20891 1 NC_015436.1 KEGG: car:cauri_0369 DNA-directed RNA polymerase subunit beta'; SPTR: DNA-directed RNA polymerase subunit beta'; IMG reference gene:2503956283; hypothetical protein 20891 10494294 Spico_0019 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410643.1 20502 D 760011 CDS YP_004410644.1 330836003 10494295 20895..21908 1 NC_015436.1 COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR023210; KEGG: hoh:Hoch_6537 aldo/keto reductase; PFAM: NADP-dependent oxidoreductase domain; PRIAM: Aryl-alcohol dehydrogenase (NADP(+)); SPTR: Aldo/keto reductase; IMG reference gene:2503956284; PFAM: Aldo/keto reductase; aryl-alcohol dehydrogenase 21908 10494295 Spico_0020 Sphaerochaeta coccoides DSM 17374 aryl-alcohol dehydrogenase YP_004410644.1 20895 D 760011 CDS YP_004410645.1 330836004 10494296 21940..22899 1 NC_015436.1 COGs: COG0524 Sugar kinase ribokinase; InterPro IPR011877:IPR011611; KEGG: csh:Closa_1899 ribokinase; PFAM: Carbohydrate/purine kinase; PRIAM: Ribokinase; SPTR: uncharacterized protein; TIGRFAM: Ribokinase, bacterial; IMG reference gene:2503956285; PFAM: pfkB family carbohydrate kinase; TIGRFAM: ribokinase; ribokinase 22899 10494296 Spico_0021 Sphaerochaeta coccoides DSM 17374 ribokinase YP_004410645.1 21940 D 760011 CDS YP_004410646.1 330836005 10494297 23153..23926 1 NC_015436.1 COGs: COG2188 Transcriptional regulators; InterPro IPR000524:IPR011663; KEGG: lac:LBA0393 transcriptional regulator; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; SMART: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; SPTR: uncharacterized protein; IMG reference gene:2503956286; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain; GntR family transcriptional regulator 23926 10494297 Spico_0022 Sphaerochaeta coccoides DSM 17374 GntR family transcriptional regulator YP_004410646.1 23153 D 760011 CDS YP_004410647.1 330836006 10494298 24285..25244 1 NC_015436.1 COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140; KEGG: tpd:Teth39_2074 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; PRIAM: Phosphoglycerate dehydrogenase; SPTR: uncharacterized protein; IMG reference gene:2503956287; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; Phosphoglycerate dehydrogenase 25244 10494298 Spico_0023 Sphaerochaeta coccoides DSM 17374 Phosphoglycerate dehydrogenase YP_004410647.1 24285 D 760011 CDS YP_004410648.1 330836007 10494299 complement(25409..26557) 1 NC_015436.1 COGs: COG0192 S-adenosylmethionine synthetase; HAMAP: S-adenosylmethionine synthetase; InterPro IPR002133:IPR022628:IPR022629:IPR022630; KEGG: sta:STHERM_c00130 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase, C-terminal; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal; PRIAM: Methionine adenosyltransferase; SPTR: S-adenosylmethionine synthetase; TIGRFAM: S-adenosylmethionine synthetase; IMG reference gene:2503956288; PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain; TIGRFAM: S-adenosylmethionine synthetase; methionine adenosyltransferase 26557 10494299 Spico_0024 Sphaerochaeta coccoides DSM 17374 methionine adenosyltransferase YP_004410648.1 25409 R 760011 CDS YP_004410649.1 330836008 10494300 26706..27776 1 NC_015436.1 COGs: COG0182 translation initiation factor 2B subunit eIF-2B alpha/beta/delta family; HAMAP: translation initiation factor, aIF-2BI/5-methylthioribose-1-phosphate isomerase; InterPro IPR005251:IPR011559:IPR000649; KEGG: cpy:Cphy_2033 aIF-2BI family translation initiation factor; PFAM: Initiation factor 2B-related; PRIAM: S-methyl-5-thioribose-1-phosphate isomerase; SPTR: Methylthioribose-1-phosphate isomerase; TIGRFAM: translation initiation factor, aIF-2BI/5-methylthioribose-1-phosphate isomerase; Initiation factor 2B alpha/beta/delta; IMG reference gene:2503956289; PFAM: Initiation factor 2 subunit family; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized proteins; S-methyl-5-thioribose-1-phosphate isomerase; methylthioribose-1-phosphate isomerase 27776 10494300 Spico_0025 Sphaerochaeta coccoides DSM 17374 methylthioribose-1-phosphate isomerase YP_004410649.1 26706 D 760011 CDS YP_004410650.1 330836009 10494301 complement(27858..28874) 1 NC_015436.1 COGs: COG0524 Sugar kinase ribokinase; InterPro IPR011611; KEGG: ssm:Spirs_4279 PfkB domain protein; PFAM: Carbohydrate/purine kinase; SPTR: Glr0791 protein; IMG reference gene:2503956290; PFAM: pfkB family carbohydrate kinase; PfkB domain-containing protein 28874 10494301 Spico_0026 Sphaerochaeta coccoides DSM 17374 PfkB domain-containing protein YP_004410650.1 27858 R 760011 CDS YP_004410651.1 330836010 10494302 29013..30314 1 NC_015436.1 COGs: COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase; HAMAP: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; InterPro IPR005750:IPR001986; KEGG: sta:STHERM_c00510 hypothetical protein; PFAM: Enolpyruvate transferase domain; PRIAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; SPTR: uncharacterized protein; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; IMG reference gene:2503956291; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 30314 10494302 Spico_0027 Sphaerochaeta coccoides DSM 17374 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_004410651.1 29013 D 760011 CDS YP_004410652.1 330836011 10494303 complement(30546..30671) 1 NC_015436.1 IMG reference gene:2503956292; hypothetical protein 30671 10494303 Spico_0028 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410652.1 30546 R 760011 CDS YP_004410653.1 330836012 10494304 complement(30652..31839) 1 NC_015436.1 COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR002078:IPR003593; KEGG: dds:Ddes_2345 sigma54 specific transcriptional regulator, fis family; PFAM: RNA polymerase sigma factor 54, interaction; SMART: ATPase, AAA+ type, core; SPTR: Sigma54 specific transcriptional regulator, Fis family; IMG reference gene:2503956293; PFAM: Sigma-54 interaction domain; sigma 54 interacting domain-containing protein 31839 10494304 Spico_0029 Sphaerochaeta coccoides DSM 17374 sigma 54 interacting domain-containing protein YP_004410653.1 30652 R 760011 CDS YP_004410654.1 330836013 10494305 32249..33667 1 NC_015436.1 KEGG: tva:TVAG_082020 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956294; PFAM: Peptidase M28; hypothetical protein 33667 10494305 Spico_0030 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410654.1 32249 D 760011 CDS YP_004410655.1 330836014 10494306 complement(33645..34259) 1 NC_015436.1 COGs: COG1739 conserved hypothetical protein; InterPro IPR001498; KEGG: tde:TDE1321 hypothetical protein; PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; SPTR: uncharacterized protein; IMG reference gene:2503956295; PFAM: Uncharacterized protein family UPF0029; Domain of unknown function (DUF1949); TIGRFAM: uncharacterized protein, YigZ family; hypothetical protein 34259 10494306 Spico_0031 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410655.1 33645 R 760011 CDS YP_004410656.1 330836015 10494307 complement(34272..35276) 1 NC_015436.1 InterPro IPR000086; KEGG: ssm:Spirs_0099 NUDIX hydrolase; PFAM: NUDIX hydrolase domain; SPTR: MutT family protein, 78-dihydro-8-oxoguanine triphosphatase (8-oxo-dGTPase); IMG reference gene:2503956296; PFAM: NUDIX domain; NUDIX hydrolase 35276 10494307 Spico_0032 Sphaerochaeta coccoides DSM 17374 NUDIX hydrolase YP_004410656.1 34272 R 760011 CDS YP_004410657.1 330836016 10494308 35488..36480 1 NC_015436.1 KEGG: mpd:MCP_1774 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956297; hypothetical protein 36480 10494308 Spico_0033 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410657.1 35488 D 760011 CDS YP_004410658.1 330836017 10494309 36499..37230 1 NC_015436.1 COGs: COG0206 Cell division GTPase; InterPro IPR003008; KEGG: cth:Cthe_0445 cell division protein FtsZ; PFAM: Tubulin/FtsZ, GTPase domain; SMART: Tubulin/FtsZ, GTPase domain; SPTR: Cell division protein ftsZ; IMG reference gene:2503956298; PFAM: Tubulin/FtsZ family, GTPase domain; TIGRFAM: cell division protein FtsZ; tubulin 37230 10494309 Spico_0034 Sphaerochaeta coccoides DSM 17374 tubulin YP_004410658.1 36499 D 760011 CDS YP_004410659.1 330836018 10494310 37265..37594 1 NC_015436.1 KEGG: pop:POPTR_247422 hypothetical protein; SPTR: Chaperone protein dnaJ; IMG reference gene:2503956299; hypothetical protein 37594 10494310 Spico_0035 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410659.1 37265 D 760011 CDS YP_004410660.1 330836019 10494311 37744..38415 1 NC_015436.1 COGs: COG0274 Deoxyribose-phosphate aldolase; HAMAP: Deoxyribose-phosphate aldolase, type 1; InterPro IPR011343:IPR022979:IPR002915; KEGG: gwc:GWCH70_2432 deoxyribose-phosphate aldolase; PFAM: Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; PRIAM: Deoxyribose-phosphate aldolase; SPTR: Deoxyribose-phosphate aldolase; TIGRFAM: Deoxyribose-phosphate aldolase; IMG reference gene:2503956300; PFAM: DeoC/LacD family aldolase; TIGRFAM: deoxyribose-phosphate aldolase; Deoxyribose-phosphate aldolase 38415 10494311 Spico_0036 Sphaerochaeta coccoides DSM 17374 Deoxyribose-phosphate aldolase YP_004410660.1 37744 D 760011 CDS YP_004410661.1 330836020 10494312 38402..39556 1 NC_015436.1 COGs: COG1435 Thymidine kinase; InterPro IPR001267; KEGG: ssm:Spirs_0100 thymidine kinase; PFAM: Thymidine kinase; SPTR: Thymidine kinase; IMG reference gene:2503956301; PFAM: Thymidine kinase; thymidine kinase 39556 10494312 Spico_0037 Sphaerochaeta coccoides DSM 17374 thymidine kinase YP_004410661.1 38402 D 760011 CDS YP_004410662.1 330836021 10494313 complement(39654..40535) 1 NC_015436.1 COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: sta:STHERM_c04340 xylose isomerase domain-containing protein TIM barrel; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel; IMG reference gene:2503956302; PFAM: Xylose isomerase-like TIM barrel; xylose isomerase domain-containing protein 40535 10494313 Spico_0038 Sphaerochaeta coccoides DSM 17374 xylose isomerase domain-containing protein YP_004410662.1 39654 R 760011 CDS YP_004410663.1 330836022 10494314 40581..41960 1 NC_015436.1 COGs: COG5434 Endopygalactorunase; InterPro IPR000743:IPR006626; KEGG: sta:STHERM_c04310 hypothetical protein; PFAM: Glycoside hydrolase, family 28; PRIAM: Polygalacturonase; SPTR: uncharacterized protein; IMG reference gene:2503956303; PFAM: Glycosyl hydrolases family 28; Polygalacturonase 41960 10494314 Spico_0039 Sphaerochaeta coccoides DSM 17374 Polygalacturonase YP_004410663.1 40581 D 760011 CDS YP_004410664.1 330836023 10494315 41957..42175 1 NC_015436.1 IMG reference gene:2503956304; hypothetical protein 42175 10494315 Spico_0040 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410664.1 41957 D 760011 CDS YP_004410665.1 330836024 10494316 complement(42092..43054) 1 NC_015436.1 COGs: COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; InterPro IPR000887; KEGG: bpb:bpr_I0931 2-keto-3-deoxygluconate 6-phosphate aldolase/2-keto-4-hydroxyglutarate aldolase; PFAM: KDPG/KHG aldolase; PRIAM: 2-dehydro-3-deoxy-phosphogluconate aldolase; SPTR: Entner-Doudoroff aldolase; TIGRFAM: KDPG/KHG aldolase; IMG reference gene:2503956305; PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase 43054 10494316 Spico_0041 Sphaerochaeta coccoides DSM 17374 2-dehydro-3-deoxyphosphogluconate aldolase YP_004410665.1 42092 R 760011 CDS YP_004410666.1 330836025 10494317 43292..44332 1 NC_015436.1 COGs: COG0524 Sugar kinase ribokinase; InterPro IPR011611; KEGG: ssm:Spirs_3585 PfkB domain protein; PFAM: Carbohydrate/purine kinase; SPTR: KHG/KDPG family aldolase/carbohydrate kinase, PfkB family; IMG reference gene:2503956306; PFAM: pfkB family carbohydrate kinase; PfkB domain-containing protein 44332 10494317 Spico_0042 Sphaerochaeta coccoides DSM 17374 PfkB domain-containing protein YP_004410666.1 43292 D 760011 CDS YP_004410667.1 330836026 10494318 complement(44435..45442) 1 NC_015436.1 KEGG: bth:BT_3630 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956307; hypothetical protein 45442 10494318 Spico_0043 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410667.1 44435 R 760011 CDS YP_004410668.1 330836027 10494319 complement(45646..46137) 1 NC_015436.1 COGs: COG0350 Methylated DNA-protein cysteine methyltransferase; InterPro IPR014048:IPR008332; KEGG: aoe:Clos_0936 methylated-DNA--protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; Methylguanine DNA methyltransferase, ribonuclease-like; SPTR: Methylated-DNA-protein-cysteine methyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; IMG reference gene:2503956308; PFAM: 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain; 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase; methylated-DNA--protein-cysteine methyltransferase 46137 10494319 Spico_0044 Sphaerochaeta coccoides DSM 17374 methylated-DNA--protein-cysteine methyltransferase YP_004410668.1 45646 R 760011 CDS YP_004410669.1 330836028 10494320 complement(46181..46966) 1 NC_015436.1 COGs: COG1414 Transcriptional regulator; InterPro IPR005471:IPR014757; KEGG: etr:ETAE_1567 pectin degradation repressor; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal; SPTR: Pectin degradation repressor; IMG reference gene:2503956309; PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator; IclR family transcriptional regulator 46966 10494320 Spico_0045 Sphaerochaeta coccoides DSM 17374 IclR family transcriptional regulator YP_004410669.1 46181 R 760011 CDS YP_004410670.1 330836029 10494321 complement(46969..48390) 1 NC_015436.1 COGs: COG1904 Glucuronate isomerase; HAMAP: Uronate isomerase; InterPro IPR003766; KEGG: ttm:Tthe_2404 glucuronate isomerase; PFAM: Uronate isomerase; PRIAM: Glucuronate isomerase; SPTR: Uronate isomerase; IMG reference gene:2503956310; PFAM: Glucuronate isomerase; D-glucuronate isomerase 48390 10494321 Spico_0046 Sphaerochaeta coccoides DSM 17374 D-glucuronate isomerase YP_004410670.1 46969 R 760011 CDS YP_004410671.1 330836030 10494322 complement(48387..49934) 1 NC_015436.1 COGs: COG2721 Altronate dehydratase; InterPro IPR013974:IPR007392; KEGG: str:Sterm_0691 altronate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase, C-terminal; SAF domain; PRIAM: Altronate dehydratase; SMART: SAF domain; SPTR: Altronate dehydratase; IMG reference gene:2503956311; PFAM: SAF domain; D-galactarate dehydratase / Altronate hydrolase, C terminus; D-altronate dehydratase 49934 10494322 Spico_0047 Sphaerochaeta coccoides DSM 17374 D-altronate dehydratase YP_004410671.1 48387 R 760011 CDS YP_004410672.1 330836031 10494323 complement(49944..51437) 1 NC_015436.1 COGs: COG0246 Mannitol-1-phosphate/altronate dehydrogenase; InterPro IPR013131:IPR013118; KEGG: amt:Amet_0555 altronate oxidoreductase; PFAM: Mannitol dehydrogenase, C-terminal; Mannitol dehydrogenase, N-terminal; PRIAM: Tagaturonate reductase; SPTR: Mannitol dehydrogenase, C-terminal domain; IMG reference gene:2503956312; PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain; tagaturonate reductase 51437 10494323 Spico_0048 Sphaerochaeta coccoides DSM 17374 tagaturonate reductase YP_004410672.1 49944 R 760011 CDS YP_004410673.1 330836032 10494324 complement(51491..52468) 1 NC_015436.1 COGs: COG0385 Na+-dependent transporter; InterPro IPR002657; KEGG: bao:BAMF_0163 sodium dependent transporter; PFAM: Bile acid:sodium symporter; SPTR: Bile acid:sodium symporter; IMG reference gene:2503956313; PFAM: Sodium Bile acid symporter family; bile acid:sodium symporter 52468 10494324 Spico_0049 Sphaerochaeta coccoides DSM 17374 bile acid:sodium symporter YP_004410673.1 51491 R 760011 CDS YP_004410674.1 330836033 10494325 complement(52734..53255) 1 NC_015436.1 KEGG: bmq:BMQ_1790 secreted protein; SPTR: secreted protein; IMG reference gene:2503956314; hypothetical protein 53255 10494325 Spico_0050 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410674.1 52734 R 760011 CDS YP_004410675.1 330836034 10494326 complement(53462..55645) 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR011110:IPR000408; KEGG: aeh:Mlg_2688 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; Two component regulator propeller; SPTR: Alpha-tubulin suppressor and related RCC1 domain-containing protein-like protein; IMG reference gene:2503956315; PFAM: Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 55645 10494326 Spico_0051 Sphaerochaeta coccoides DSM 17374 chromosome condensation regulator RCC1 YP_004410675.1 53462 R 760011 CDS YP_004410676.1 330836035 10494327 complement(56113..58554) 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR011110:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Listeria/Bacterioides repeat; Two component regulator propeller; Regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; IMG reference gene:2503956316; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; hypothetical protein 58554 10494327 Spico_0052 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410676.1 56113 R 760011 CDS YP_004410677.1 330836036 10494328 58891..59022 1 NC_015436.1 IMG reference gene:2503956317; hypothetical protein 59022 10494328 Spico_0053 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410677.1 58891 D 760011 CDS YP_004410678.1 330836037 10494329 complement(58960..61344) 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR011110:IPR000408; KEGG: dal:Dalk_3426 regulator of chromosome condensation RCC1; PFAM: Listeria/Bacterioides repeat; Two component regulator propeller; Regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; IMG reference gene:2503956318; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; hypothetical protein 61344 10494329 Spico_0054 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410678.1 58960 R 760011 CDS YP_004410679.1 330836038 10494330 61810..65058 1 NC_015436.1 COGs: COG1609 Transcriptional regulators; InterPro IPR001761:IPR000005:IPR018060; KEGG: cag:Cagg_2054 two component transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; Periplasmic binding protein/LacI transcriptional regulator; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Two component transcriptional regulator, AraC family; IMG reference gene:2503956319; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; family; AraC family transcriptional regulator 65058 10494330 Spico_0055 Sphaerochaeta coccoides DSM 17374 AraC family transcriptional regulator YP_004410679.1 61810 D 760011 CDS YP_004410680.1 330836039 10494331 65211..66215 1 NC_015436.1 COGs: COG4209 ABC-type polysaccharide transport system permease component; InterPro IPR000515; KEGG: mrb:Mrub_0281 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503956320; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 1 66215 10494331 Spico_0056 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter membrane protein 1 YP_004410680.1 65211 D 760011 CDS YP_004410681.1 330836040 10494332 66226..67170 1 NC_015436.1 COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: mrb:Mrub_0280 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503956321; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 67170 10494332 Spico_0057 Sphaerochaeta coccoides DSM 17374 binding-protein-dependent transport system inner membrane protein YP_004410681.1 66226 D 760011 CDS YP_004410682.1 330836041 10494333 67248..68819 1 NC_015436.1 COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: mrb:Mrub_0279 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein family 1; IMG reference gene:2503956322; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein 68819 10494333 Spico_0058 Sphaerochaeta coccoides DSM 17374 ABC transporter substrate-binding protein YP_004410682.1 67248 D 760011 CDS YP_004410683.1 330836042 10494334 68932..70047 1 NC_015436.1 COGs: COG4225 unsaturated glucuronyl hydrolase involved in regulation of surface properties and related protein; InterPro IPR010905; KEGG: rmr:Rmar_2470 glycosyl hydrolase 88; PFAM: Glycosyl hydrolase, family 88; SPTR: Glycosyl hydrolase 88; IMG reference gene:2503956323; PFAM: Glycosyl Hydrolase 88; glycosyl hydrolase 88 70047 10494334 Spico_0059 Sphaerochaeta coccoides DSM 17374 glycosyl hydrolase 88 YP_004410683.1 68932 D 760011 CDS YP_004410684.1 330836043 10494335 complement(70283..72487) 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR011110:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; Two component regulator propeller; SPTR: uncharacterized protein; IMG reference gene:2503956324; PFAM: Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 72487 10494335 Spico_0060 Sphaerochaeta coccoides DSM 17374 chromosome condensation regulator RCC1 YP_004410684.1 70283 R 760011 CDS YP_004410685.1 330836044 10494336 complement(72886..75375) 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Listeria/Bacterioides repeat; Regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; IMG reference gene:2503956325; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; hypothetical protein 75375 10494336 Spico_0061 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410685.1 72886 R 760011 CDS YP_004410686.1 330836045 10494337 75898..76971 1 NC_015436.1 COGs: COG1744 Uncharacterized ABC-type transport system periplasmic component/surface lipoprotein; InterPro IPR003760; KEGG: tde:TDE1950 membrane lipoprotein TmpC, PFAM: Basic membrane lipoprotein; SPTR: Membrane lipoprotein tmpc; IMG reference gene:2503956326; PFAM: Basic membrane protein; nucleoside-binding protein 76971 10494337 Spico_0062 Sphaerochaeta coccoides DSM 17374 nucleoside-binding protein YP_004410686.1 75898 D 760011 CDS YP_004410687.1 330836046 10494338 77093..78613 1 NC_015436.1 COGs: COG3845 ABC-type uncharacterized transport systems ATPase components; InterPro IPR003439:IPR003593; KEGG: tde:TDE1949 ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; IMG reference gene:2503956327; PFAM: ABC transporter; nucleoside ABC transporter ATP-binding protein 78613 10494338 Spico_0063 Sphaerochaeta coccoides DSM 17374 nucleoside ABC transporter ATP-binding protein YP_004410687.1 77093 D 760011 CDS YP_004410688.1 330836047 10494339 78610..79725 1 NC_015436.1 COGs: COG4603 ABC-type uncharacterized transport system permease component; InterPro IPR001851; KEGG: tde:TDE1948 ABC transporter, permease; PFAM: ABC transporter permease; SPTR: ABC transporter, permease; IMG reference gene:2503956328; PFAM: Branched-chain amino acid transport system / permease component; nucleoside ABC transporter membrane protein 79725 10494339 Spico_0064 Sphaerochaeta coccoides DSM 17374 nucleoside ABC transporter membrane protein YP_004410688.1 78610 D 760011 CDS YP_004410689.1 330836048 10494340 79727..80659 1 NC_015436.1 COGs: COG1079 ABC-type transport system permease component; InterPro IPR001851; KEGG: tde:TDE1947 ABC transporter, permease; PFAM: ABC transporter permease; SPTR: ABC transporter, permease; IMG reference gene:2503956329; PFAM: Branched-chain amino acid transport system / permease component; nucleoside ABC transporter membrane protein 80659 10494340 Spico_0065 Sphaerochaeta coccoides DSM 17374 nucleoside ABC transporter membrane protein YP_004410689.1 79727 D 760011 CDS YP_004410690.1 330836049 10494341 80853..81683 1 NC_015436.1 COGs: COG0005 Purine nucleoside phosphorylase; InterPro IPR011268:IPR011270:IPR000845; KEGG: ssm:Spirs_4139 purine nucleoside phosphorylase I, inosine and guanosine-specific; PFAM: Nucleoside phosphorylase domain; PRIAM: Purine-nucleoside phosphorylase; SPTR: Purine nucleoside phosphorylase I, inosine and guanosine-specific; TIGRFAM: Inosine guanosine/xanthosine phosphorylase; Purine nucleoside phosphorylase I, inosine/guanosine-specific; IMG reference gene:2503956330; PFAM: Phosphorylase superfamily; TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine guanosine and xanthosine phosphorylase; inosine guanosine and xanthosine phosphorylase 81683 10494341 Spico_0066 Sphaerochaeta coccoides DSM 17374 inosine guanosine and xanthosine phosphorylase YP_004410690.1 80853 D 760011 CDS YP_004410691.1 330836050 10494342 81671..82159 1 NC_015436.1 COGs: COG3542 conserved hypothetical protein; InterPro IPR009327; KEGG: sco:SCO4051 hypothetical protein; PFAM: Protein of unknown function DUF985; SPTR: uncharacterized protein; IMG reference gene:2503956331; PFAM: Cupin superfamily (DUF985); hypothetical protein 82159 10494342 Spico_0067 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410691.1 81671 D 760011 CDS YP_004410692.1 330836051 10494343 82159..82902 1 NC_015436.1 COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198:IPR020842; KEGG: ssm:Spirs_3584 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SMART: Polyketide synthase/Fatty acid synthase, KR; SPTR: Short-chain dehydrogenase/reductase SDR; IMG reference gene:2503956332; PFAM: short chain dehydrogenase; 3-oxoacyl-ACP reductase 82902 10494343 Spico_0068 Sphaerochaeta coccoides DSM 17374 3-oxoacyl-ACP reductase YP_004410692.1 82159 D 760011 CDS YP_004410693.1 330836052 10494344 82910..83599 1 NC_015436.1 COGs: COG2129 phosphoesterase related to the Icc protein; InterPro IPR004843; KEGG: sta:STHERM_c06590 Ser/Thr protein phosphatase; PFAM: Metallo-dependent phosphatase; SPTR: Metallophosphoesterase; IMG reference gene:2503956333; PFAM: Calcineurin-like phosphoesterase; metallophosphoesterase 83599 10494344 Spico_0069 Sphaerochaeta coccoides DSM 17374 metallophosphoesterase YP_004410693.1 82910 D 760011 CDS YP_004410694.1 330836053 10494345 83592..84503 1 NC_015436.1 KEGG: ssm:Spirs_2366 hypothetical protein; SPTR: Transcriptional regulator; IMG reference gene:2503956334; hypothetical protein 84503 10494345 Spico_0070 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410694.1 83592 D 760011 CDS YP_004410695.1 330836054 10494346 complement(84507..85103) 1 NC_015436.1 KEGG: cdf:CD1458 flavoprotein; SPTR: Probable flavoprotein; IMG reference gene:2503956335; PFAM: NADPH-dependent FMN reductase; hypothetical protein 85103 10494346 Spico_0071 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410695.1 84507 R 760011 CDS YP_004410696.1 330836055 10494347 complement(85182..85964) 1 NC_015436.1 COGs: COG1119 ABC-type molybdenum transport system ATPase component/photorepair protein PhrA; InterPro IPR003439:IPR003593; KEGG: mma:MM_0570 ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; IMG reference gene:2503956336; PFAM: ABC transporter; ABC transporter 85964 10494347 Spico_0072 Sphaerochaeta coccoides DSM 17374 ABC transporter YP_004410696.1 85182 R 760011 CDS YP_004410697.1 330836056 10494348 complement(85969..86733) 1 NC_015436.1 COGs: COG2186 Transcriptional regulators; InterPro IPR000524; KEGG: ssm:Spirs_1347 GntR domain protein; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; SPTR: Transcriptional regulator; IMG reference gene:2503956337; PFAM: Bacterial regulatory proteins, gntR family; FCD domain; GntR family transcriptional regulator 86733 10494348 Spico_0073 Sphaerochaeta coccoides DSM 17374 GntR family transcriptional regulator YP_004410697.1 85969 R 760011 CDS YP_004410698.1 330836057 10494349 complement(86850..86960) 1 NC_015436.1 IMG reference gene:2503956338; hypothetical protein 86960 10494349 Spico_0074 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410698.1 86850 R 760011 CDS YP_004410699.1 330836058 10494350 complement(87066..87803) 1 NC_015436.1 KEGG: tgu:100225112 similar to ARID4B variant protein; SPTR: Type I secretion outer membrane protein, TolC family; IMG reference gene:2503956339; hypothetical protein 87803 10494350 Spico_0075 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410699.1 87066 R 760011 CDS YP_004410700.1 330836059 10494351 88129..89343 1 NC_015436.1 COGs: COG1760 L-serine deaminase; InterPro IPR005131:IPR005130; KEGG: bfs:BF1216 L-serine dehydratase; PFAM: Serine dehydratase-like, alpha subunit; Serine dehydratase beta chain; PRIAM: L-serine ammonia-lyase; SPTR: L-serine dehydratase; IMG reference gene:2503956340; PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, single chain form; L-serine ammonia-lyase 89343 10494351 Spico_0076 Sphaerochaeta coccoides DSM 17374 L-serine ammonia-lyase YP_004410700.1 88129 D 760011 CDS YP_004410701.1 330836060 10494352 complement(89440..90462) 1 NC_015436.1 COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: ssm:Spirs_0788 transcriptional regulator, LacI family; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI; SPTR: Transcriptional regulator, LacI family; IMG reference gene:2503956341; PFAM: Bacterial regulatory proteins, lacI family; family; LacI family transcriptional regulator 90462 10494352 Spico_0077 Sphaerochaeta coccoides DSM 17374 LacI family transcriptional regulator YP_004410701.1 89440 R 760011 CDS YP_004410702.1 330836061 10494353 complement(90767..91720) 1 NC_015436.1 COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR001761; KEGG: ssm:Spirs_1666 periplasmic binding protein/LacI transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; SPTR: D-ribose-binding periplasmic protein; IMG reference gene:2503956342; PFAM: family; periplasmic binding protein/LacI transcriptional regulator 91720 10494353 Spico_0078 Sphaerochaeta coccoides DSM 17374 periplasmic binding protein/LacI transcriptional regulator YP_004410702.1 90767 R 760011 CDS YP_004410703.1 330836062 10494354 complement(91792..92781) 1 NC_015436.1 COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: ssm:Spirs_1665 inner-membrane translocator; PFAM: ABC transporter permease; SPTR: Ribose ABC transporter (Permease); IMG reference gene:2503956343; PFAM: Branched-chain amino acid transport system / permease component; monosaccharide ABC transporter membrane protein, CUT2 family 92781 10494354 Spico_0079 Sphaerochaeta coccoides DSM 17374 monosaccharide ABC transporter membrane protein, CUT2 family YP_004410703.1 91792 R 760011 CDS YP_004410704.1 330836063 10494355 complement(92830..93828) 1 NC_015436.1 COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: ssm:Spirs_1664 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; PRIAM: Inositol 2-dehydrogenase; SPTR: Myo-inositol 2-dehydrogenase; IMG reference gene:2503956344; PFAM: Oxidoreductase, NAD-binding Rossmann fold; Oxidoreductase, C-terminal alpha/beta domain; Inositol 2-dehydrogenase 93828 10494355 Spico_0080 Sphaerochaeta coccoides DSM 17374 Inositol 2-dehydrogenase YP_004410704.1 92830 R 760011 CDS YP_004410705.1 330836064 10494356 complement(93868..95370) 1 NC_015436.1 COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: ssm:Spirs_1663 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Ribose import ATP-binding protein RbsA; IMG reference gene:2503956345; PFAM: ABC transporter; monosaccharide ABC transporter ATP-binding protein, CUT2 family 95370 10494356 Spico_0081 Sphaerochaeta coccoides DSM 17374 monosaccharide ABC transporter ATP-binding protein, CUT2 family YP_004410705.1 93868 R 760011 CDS YP_004410706.1 330836065 10494357 95755..96795 1 NC_015436.1 COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: kol:Kole_0987 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; PRIAM: Inositol 2-dehydrogenase; SPTR: Oxidoreductase domain protein; IMG reference gene:2503956346; PFAM: Oxidoreductase, NAD-binding Rossmann fold; Oxidoreductase, C-terminal alpha/beta domain; myo-inositol 2-dehydrogenase 96795 10494357 Spico_0082 Sphaerochaeta coccoides DSM 17374 myo-inositol 2-dehydrogenase YP_004410706.1 95755 D 760011 CDS YP_004410707.1 330836066 10494358 96792..97604 1 NC_015436.1 COGs: COG3718 Uncharacterized protein involved in inositol metabolism; KEGG: kol:Kole_0990 myo-inositol catabolism IolB domain protein; SPTR: Myo-inositol catabolism IolB domain protein; IMG reference gene:2503956347; PFAM: KduI/IolB family; myo-inositol catabolism IolB domain-containing protein 97604 10494358 Spico_0083 Sphaerochaeta coccoides DSM 17374 myo-inositol catabolism IolB domain-containing protein YP_004410707.1 96792 D 760011 CDS YP_004410708.1 330836067 10494359 97627..99492 1 NC_015436.1 COGs: COG3962 Acetolactate synthase; InterPro IPR012001:IPR012000:IPR011766; KEGG: ssm:Spirs_2987 thiamine pyrophosphate protein domain protein TPP-binding protein; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; PRIAM: Acetolactate synthase; SPTR: Thiamine pyrophosphate protein central region; IMG reference gene:2503956348; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase 99492 10494359 Spico_0084 Sphaerochaeta coccoides DSM 17374 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase YP_004410708.1 97627 D 760011 CDS YP_004410709.1 330836068 10494360 99519..100412 1 NC_015436.1 COGs: COG1082 Sugar phosphate isomerase/epimerase; HAMAP: Inosose dehydratase; InterPro IPR012307; KEGG: str:Sterm_4013 myo-inosose-2 dehydratase; PFAM: Xylose isomerase, TIM barrel domain; PRIAM: Myo-inosose-2 dehydratase; SPTR: Myo-inosose-2 dehydratase; IMG reference gene:2503956349; PFAM: Xylose isomerase-like TIM barrel; 2-keto-myo-inositol dehydratase 100412 10494360 Spico_0085 Sphaerochaeta coccoides DSM 17374 2-keto-myo-inositol dehydratase YP_004410709.1 99519 D 760011 CDS YP_004410710.1 330836069 10494361 100458..101492 1 NC_015436.1 COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterPro IPR006436:IPR005106:IPR020829:IPR020828; KEGG: ssm:Spirs_0990 glyceraldehyde-3-phosphate dehydrogenase, type II; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Aspartate/homoserine dehydrogenase, NAD-binding; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (NAD(P)(+)) (phosphorylating); SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; SPTR: Glyceraldehyde-3-phosphate dehydrogenase, type II; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type II; IMG reference gene:2503956350; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type II; glyceraldehyde-3-phosphate dehydrogenase 101492 10494361 Spico_0086 Sphaerochaeta coccoides DSM 17374 glyceraldehyde-3-phosphate dehydrogenase YP_004410710.1 100458 D 760011 CDS YP_004410711.1 330836070 10494362 101477..102781 1 NC_015436.1 COGs: COG0126 3-phosphoglycerate kinase; InterPro IPR001576; KEGG: ssm:Spirs_0989 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; PRIAM: Phosphoglycerate kinase; SPTR: Phosphoglycerate kinase; IMG reference gene:2503956351; PFAM: Phosphoglycerate kinase; phosphoglycerate kinase 102781 10494362 Spico_0087 Sphaerochaeta coccoides DSM 17374 phosphoglycerate kinase YP_004410711.1 101477 D 760011 CDS YP_004410712.1 330836071 10494363 102778..104061 1 NC_015436.1 COGs: COG3875 conserved hypothetical protein; InterPro IPR018657; KEGG: ssm:Spirs_0988 protein of unknown function DUF2088; PFAM: Protein of unknown function DUF2088; SPTR: General glycosylation pathway protein; IMG reference gene:2503956352; PFAM: NNMT/PNMT/TEMT family; Uncharacterized conserved protein (DUF2088); hypothetical protein 104061 10494363 Spico_0088 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410712.1 102778 D 760011 CDS YP_004410713.1 330836072 10494364 complement(104177..106708) 1 NC_015436.1 COGs: COG0495 Leucyl-tRNA synthetase; InterPro IPR002302:IPR015413:IPR013155; KEGG: ssm:Spirs_0283 leucyl-tRNA synthetase; PFAM: Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding; Aminoacyl-tRNA synthetase, class I (M); PRIAM: Leucine--tRNA ligase; SPTR: Leucyl-tRNA synthetase; TIGRFAM: Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial; IMG reference gene:2503956353; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family; leucyl-tRNA synthetase 106708 10494364 Spico_0089 Sphaerochaeta coccoides DSM 17374 leucyl-tRNA synthetase YP_004410713.1 104177 R 760011 CDS YP_004410714.1 330836073 10494365 complement(107021..108073) 1 NC_015436.1 COGs: COG3177 conserved hypothetical protein; InterPro IPR003812; KEGG: afn:Acfer_1163 filamentation induced by cAMP protein Fic; PFAM: Filamentation induced by cAMP/death on curing-related; SPTR: uncharacterized protein; IMG reference gene:2503956354; PFAM: Fic/DOC family; Fic family protein 108073 10494365 Spico_0090 Sphaerochaeta coccoides DSM 17374 Fic family protein YP_004410714.1 107021 R 760011 CDS YP_004410715.1 330836074 10494366 108285..109073 1 NC_015436.1 COGs: COG2116 Formate/nitrite family of transporter; InterPro IPR000292; KEGG: str:Sterm_3165 formate/nitrite transporter; PFAM: Formate/nitrite transporter; SPTR: Formate/nitrite transporter; IMG reference gene:2503956355; PFAM: Formate/nitrite transporter; TIGRFAM: formate/nitrite transporter; formate/nitrite transporter 109073 10494366 Spico_0091 Sphaerochaeta coccoides DSM 17374 formate/nitrite transporter YP_004410715.1 108285 D 760011 CDS YP_004410716.1 330836075 10494367 complement(109089..109709) 1 NC_015436.1 COGs: COG0293 23S rRNA methylase; HAMAP: Ribosomal RNA large subunit methyltransferase E; InterPro IPR015507:IPR002877; KEGG: ssm:Spirs_0297 ribosomal RNA methyltransferase RrmJ/FtsJ; PFAM: Ribosomal RNA methyltransferase RrmJ/FtsJ; SPTR: Ribosomal RNA large subunit methyltransferase E; IMG reference gene:2503956356; PFAM: FtsJ-like methyltransferase; TIGRFAM: cell division protein FtsJ; ribosomal RNA large subunit methyltransferase E 109709 10494367 Spico_0092 Sphaerochaeta coccoides DSM 17374 ribosomal RNA large subunit methyltransferase E YP_004410716.1 109089 R 760011 CDS YP_004410717.1 330836076 10494368 complement(109717..111039) 1 NC_015436.1 COGs: COG0523 GTPase (G3E family); InterPro IPR003495:IPR011629; KEGG: bur:Bcep18194_A3246 cobalamin synthesis protein/P47K; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; SMART: Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; SPTR: Cobalamin synthesis protein/P47K; IMG reference gene:2503956357; PFAM: CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain; cobalamin synthesis protein P47K 111039 10494368 Spico_0093 Sphaerochaeta coccoides DSM 17374 cobalamin synthesis protein P47K YP_004410717.1 109717 R 760011 CDS YP_004410718.1 330836077 10494369 111323..112264 1 NC_015436.1 COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: eat:EAT1b_0550 glucokinase, ROK family; PFAM: ROK; PRIAM: Glucokinase; SPTR: Glucokinase, ROK family; IMG reference gene:2503956358; PFAM: ROK family; TIGRFAM: ROK family protein ( glucokinase); glucokinase 112264 10494369 Spico_0094 Sphaerochaeta coccoides DSM 17374 glucokinase YP_004410718.1 111323 D 760011 CDS YP_004410719.1 330836078 10494370 112270..114663 1 NC_015436.1 COGs: COG1882 Pyruvate-formate lyase; InterPro IPR010098:IPR004184:IPR001150; KEGG: cbe:Cbei_0705 pyruvate formate-lyase; PFAM: Pyruvate formate-lyase, PFL; Formate C-acetyltransferase glycine radical; PRIAM: Formate C-acetyltransferase; SPTR: Pyruvate formate-lyase; TIGRFAM: Pyruvate formate-lyase; IMG reference gene:2503956359; PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: pyruvate formate-lyase; pyruvate formate-lyase 114663 10494370 Spico_0095 Sphaerochaeta coccoides DSM 17374 pyruvate formate-lyase YP_004410719.1 112270 D 760011 CDS YP_004410720.1 330836079 10494371 114663..115406 1 NC_015436.1 COGs: COG1349 Transcriptional regulators of sugar metabolism; InterPro IPR001034:IPR014036; KEGG: cbl:CLK_0642 HTH-type transcriptional regulator YciT; PFAM: HTH transcriptional regulator, DeoR; HTH transcriptional regulator, DeoR N-terminal; SMART: HTH transcriptional regulator, DeoR N-terminal; SPTR: Transcriptional regulator, DeoR family; IMG reference gene:2503956360; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain; DeoR family transcriptional regulator 115406 10494371 Spico_0096 Sphaerochaeta coccoides DSM 17374 DeoR family transcriptional regulator YP_004410720.1 114663 D 760011 CDS YP_004410721.1 330836080 10494372 115669..116640 1 NC_015436.1 COGs: COG1879 ABC-type sugar transport system periplasmic component; KEGG: pin:Ping_2790 bifunctional carbohydrate binding and transport protein; SPTR: Bifunctional carbohydrate binding and transport protein; IMG reference gene:2503956361; bifunctional carbohydrate binding and transport protein 116640 10494372 Spico_0097 Sphaerochaeta coccoides DSM 17374 bifunctional carbohydrate binding and transport protein YP_004410721.1 115669 D 760011 CDS YP_004410722.1 330836081 10494373 116941..118419 1 NC_015436.1 COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: dtu:Dtur_1644 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; IMG reference gene:2503956362; PFAM: ABC transporter; monosaccharide-transporting ATPase 118419 10494373 Spico_0098 Sphaerochaeta coccoides DSM 17374 monosaccharide-transporting ATPase YP_004410722.1 116941 D 760011 CDS YP_004410723.1 330836082 10494374 118432..119439 1 NC_015436.1 COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: cbk:CLL_A1530 ribose transport system permease RbsC; PFAM: ABC transporter permease; SPTR: Ribose transport system permease RbsC; IMG reference gene:2503956363; PFAM: Branched-chain amino acid transport system / permease component; inner-membrane translocator 119439 10494374 Spico_0099 Sphaerochaeta coccoides DSM 17374 inner-membrane translocator YP_004410723.1 118432 D 760011 CDS YP_004410724.1 330836083 10494375 119455..120462 1 NC_015436.1 COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: pmu:PM0154 ribose ABC transporter permease; PFAM: ABC transporter permease; SPTR: RbsC; IMG reference gene:2503956364; PFAM: Branched-chain amino acid transport system / permease component; inner-membrane translocator 120462 10494375 Spico_0100 Sphaerochaeta coccoides DSM 17374 inner-membrane translocator YP_004410724.1 119455 D 760011 CDS YP_004410725.1 330836084 10494376 120632..121639 1 NC_015436.1 COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: tit:Thit_2113 transcriptional regulator, LacI family; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI; SPTR: Transcriptional regulator, LacI family; IMG reference gene:2503956365; PFAM: Bacterial regulatory proteins, lacI family; family; LacI family transcriptional regulator 121639 10494376 Spico_0101 Sphaerochaeta coccoides DSM 17374 LacI family transcriptional regulator YP_004410725.1 120632 D 760011 CDS YP_004410726.1 330836085 10494377 121705..122808 1 NC_015436.1 COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: pjd:Pjdr2_4722 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Oxidoreductase domain protein; manually curated; IMG reference gene:2503956366; PFAM: Oxidoreductase, NAD-binding Rossmann fold; Oxidoreductase, C-terminal alpha/beta domain; oxidoreductase domain-containing protein 122808 10494377 Spico_0102 Sphaerochaeta coccoides DSM 17374 oxidoreductase domain-containing protein YP_004410726.1 121705 D 760011 CDS YP_004410727.1 330836086 10494378 complement(122828..124609) 1 NC_015436.1 KEGG: cel:T01G9.5 defective MEIosis family member (mei-1); SPTR: Meiotic spindle formation protein mei-1; IMG reference gene:2503956367; hypothetical protein 124609 10494378 Spico_0103 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410727.1 122828 R 760011 CDS YP_004410728.1 330836087 10494379 complement(124615..125508) 1 NC_015436.1 COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR012839:IPR007197:IPR001450; KEGG: clj:CLJU_c25970 pyruvate formate-lyase activating enzyme; PFAM: Radical SAM; 4Fe-4S binding domain; PRIAM: [Formate-C-acetyltransferase]-activating enzyme; SPTR: uncharacterized protein; TIGRFAM: Glycyl radical enzyme-activating; IMG reference gene:2503956368; PFAM: Radical SAM superfamily; TIGRFAM: glycyl-radical enzyme activating protein family; glycyl-radical enzyme activating protein family 125508 10494379 Spico_0104 Sphaerochaeta coccoides DSM 17374 glycyl-radical enzyme activating protein family YP_004410728.1 124615 R 760011 CDS YP_004410729.1 330836088 10494380 complement(125505..127862) 1 NC_015436.1 COGs: COG1882 Pyruvate-formate lyase; InterPro IPR010098:IPR004184:IPR001150; KEGG: clj:CLJU_c25980 pyruvate formate-lyase; PFAM: Pyruvate formate-lyase, PFL; Formate C-acetyltransferase glycine radical; PRIAM: Formate C-acetyltransferase; SPTR: uncharacterized protein; TIGRFAM: Pyruvate formate-lyase; IMG reference gene:2503956369; PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: pyruvate formate-lyase; pyruvate formate-lyase 127862 10494380 Spico_0105 Sphaerochaeta coccoides DSM 17374 pyruvate formate-lyase YP_004410729.1 125505 R 760011 CDS YP_004410730.1 330836089 10494381 128033..128827 1 NC_015436.1 COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: gym:GYMC10_4683 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: uncharacterized protein; IMG reference gene:2503956370; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator 128827 10494381 Spico_0106 Sphaerochaeta coccoides DSM 17374 AraC family transcriptional regulator YP_004410730.1 128033 D 760011 CDS YP_004410731.1 330836090 10494382 129123..130334 1 NC_015436.1 COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: tde:TDE2361 high-affinity branched chain amino acid ABC transporter, amino acid-binding protein; PFAM: Extracellular ligand-binding receptor; SPTR: Extracellular ligand-binding receptor; IMG reference gene:2503956371; PFAM: Receptor family ligand binding region; ABC transporter substrate-binding protein 130334 10494382 Spico_0107 Sphaerochaeta coccoides DSM 17374 ABC transporter substrate-binding protein YP_004410731.1 129123 D 760011 CDS YP_004410732.1 330836091 10494383 130418..131296 1 NC_015436.1 COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: tde:TDE2366 high-affinity branched-chain amino acid ABC transporter, permease; PFAM: ABC transporter permease; SPTR: High-affinity branched-chain amino acid ABC transporter, permease; IMG reference gene:2503956372; PFAM: Branched-chain amino acid transport system / permease component; inner-membrane translocator 131296 10494383 Spico_0108 Sphaerochaeta coccoides DSM 17374 inner-membrane translocator YP_004410732.1 130418 D 760011 CDS YP_004410733.1 330836092 10494384 131309..132310 1 NC_015436.1 COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: tde:TDE2365 high-affinity branched-chain amino acid ABC transporter, permease; PFAM: ABC transporter permease; SPTR: High-affinity branched-chain amino acid ABC transporter, permease; IMG reference gene:2503956373; PFAM: Branched-chain amino acid transport system / permease component; inner-membrane translocator 132310 10494384 Spico_0109 Sphaerochaeta coccoides DSM 17374 inner-membrane translocator YP_004410733.1 131309 D 760011 CDS YP_004410734.1 330836093 10494385 132303..133064 1 NC_015436.1 COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: bts:Btus_1713 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Amino acid ABC transporter, ATP-binding protein; IMG reference gene:2503956374; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; amino acid ABC transporter ATP-binding protein 133064 10494385 Spico_0110 Sphaerochaeta coccoides DSM 17374 amino acid ABC transporter ATP-binding protein YP_004410734.1 132303 D 760011 CDS YP_004410735.1 330836094 10494386 133066..133776 1 NC_015436.1 COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: dhd:Dhaf_4922 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Branched-chain amino acid ABC superfamily ATP binding cassette transporter, ABC protein; IMG reference gene:2503956375; PFAM: ABC transporter; ABC transporter 133776 10494386 Spico_0111 Sphaerochaeta coccoides DSM 17374 ABC transporter YP_004410735.1 133066 D 760011 CDS YP_004410736.1 330836095 10494387 133814..134902 1 NC_015436.1 KEGG: aco:Amico_0456 uroporphyrinogen decarboxylase; SPTR: Uroporphyrinogen decarboxylase; IMG reference gene:2503956376; PFAM: Uroporphyrinogen decarboxylase (URO-D); hypothetical protein 134902 10494387 Spico_0112 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410736.1 133814 D 760011 CDS YP_004410737.1 330836096 10494388 134914..136182 1 NC_015436.1 COGs: COG3681 conserved hypothetical protein; HAMAP: Uncharacterised protein family UPF0597; InterPro IPR021144; KEGG: cpy:Cphy_1256 hypothetical protein; SPTR: UPF0597 protein CUW_0913; IMG reference gene:2503956377; PFAM: Serine dehydratase alpha chain; hypothetical protein 136182 10494388 Spico_0113 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410737.1 134914 D 760011 CDS YP_004410738.1 330836097 10494389 136196..137062 1 NC_015436.1 COGs: COG0169 Shikimate 5-dehydrogenase; HAMAP: Shikimate, quinate/shikimate dehydrogenase; InterPro IPR011342:IPR022893:IPR013708:IPR006151; KEGG: mmw:Mmwyl1_0070 shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; SPTR: Shikimate dehydrogenase; TIGRFAM: Shikimate dehydrogenase; IMG reference gene:2503956378; PFAM: Shikimate dehydrogenase substrate binding domain; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; shikimate dehydrogenase 137062 10494389 Spico_0114 Sphaerochaeta coccoides DSM 17374 shikimate dehydrogenase YP_004410738.1 136196 D 760011 CDS YP_004410739.1 330836098 10494390 137349..138107 1 NC_015436.1 COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR012839:IPR007197; KEGG: ssa:SSA_0277 pyruvate formate-lyase 3, PFAM: Radical SAM; PRIAM: [Formate-C-acetyltransferase]-activating enzyme; SPTR: Pyruvate formate-lyase 3, ; TIGRFAM: Glycyl radical enzyme-activating; IMG reference gene:2503956379; PFAM: Radical SAM superfamily; TIGRFAM: glycyl-radical enzyme activating protein family; glycyl-radical enzyme activating protein family 138107 10494390 Spico_0115 Sphaerochaeta coccoides DSM 17374 glycyl-radical enzyme activating protein family YP_004410739.1 137349 D 760011 CDS YP_004410740.1 330836099 10494391 138605..139372 1 NC_015436.1 COGs: COG0705 membrane protein; InterPro IPR022764; KEGG: sta:STHERM_c21730 rhomboid family protein; PFAM: Peptidase S54, rhomboid domain; SPTR: Rhomboid family protein; IMG reference gene:2503956380; PFAM: Rhomboid family; Peptidase S54, rhomboid domain-containing protein 139372 10494391 Spico_0116 Sphaerochaeta coccoides DSM 17374 Peptidase S54, rhomboid domain-containing protein YP_004410740.1 138605 D 760011 CDS YP_004410741.1 330836100 10494392 complement(139373..140494) 1 NC_015436.1 COGs: COG1816 Adenosine deaminase; HAMAP: Adenosine deaminase; InterPro IPR006330:IPR001365; KEGG: ssm:Spirs_0300 adenosine deaminase; PFAM: Adenosine/AMP deaminase; PRIAM: Adenosine deaminase; SPTR: Adenosine deaminase; TIGRFAM: Adenosine deaminase; IMG reference gene:2503956381; PFAM: Adenosine/AMP deaminase; TIGRFAM: adenosine deaminase; adenosine deaminase 140494 10494392 Spico_0117 Sphaerochaeta coccoides DSM 17374 adenosine deaminase YP_004410741.1 139373 R 760011 CDS YP_004410742.1 330836101 10494393 140629..141141 1 NC_015436.1 InterPro IPR002110; KEGG: wpi:WPa_1379 ankyrin repeat domain protein; PFAM: Ankyrin repeat; SPTR: FOG: Ankyrin repeat; IMG reference gene:2503956382; PFAM: Ankyrin repeat; ankyrin 141141 10494393 Spico_0118 Sphaerochaeta coccoides DSM 17374 ankyrin YP_004410742.1 140629 D 760011 CDS YP_004410743.1 330836102 10494394 complement(141203..142963) 1 NC_015436.1 COGs: COG0442 Prolyl-tRNA synthetase; HAMAP: Prolyl-tRNA synthetase, class IIa, bacterial; InterPro IPR004500:IPR002314:IPR007214:IPR004154; KEGG: stp:Strop_1793 prolyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; YbaK/aminoacyl-tRNA synthetase-associated domain; Anticodon-binding; SPTR: Prolyl-tRNA synthetase; TIGRFAM: Prolyl-tRNA synthetase, class IIa, bacterial; IMG reference gene:2503956383; PFAM: YbaK / prolyl-tRNA synthetases associated domain; Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family II; prolyl-tRNA synthetase 142963 10494394 Spico_0119 Sphaerochaeta coccoides DSM 17374 prolyl-tRNA synthetase YP_004410743.1 141203 R 760011 CDS YP_004410744.1 330836103 10494395 143142..143789 1 NC_015436.1 COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: ssm:Spirs_2391 class II aldolase/adducin family protein; PFAM: Class II aldolase/adducin, N-terminal; SPTR: Class II aldolase/adducin family protein; IMG reference gene:2503956384; PFAM: Class II Aldolase and Adducin N-terminal domain; class II aldolase/adducin family protein 143789 10494395 Spico_0120 Sphaerochaeta coccoides DSM 17374 class II aldolase/adducin family protein YP_004410744.1 143142 D 760011 CDS YP_004410745.1 330836104 10494396 143877..144734 1 NC_015436.1 COGs: COG3959 Transketolase N-terminal subunit; InterPro IPR005474; KEGG: ssm:Spirs_2992 transketolase domain protein; PFAM: Transketolase, N-terminal; PRIAM: Transketolase; SPTR: Transketolase domain protein; IMG reference gene:2503956385; PFAM: Transketolase, thiamine diphosphate binding domain; transketolase 144734 10494396 Spico_0121 Sphaerochaeta coccoides DSM 17374 transketolase YP_004410745.1 143877 D 760011 CDS YP_004410746.1 330836105 10494397 144731..145678 1 NC_015436.1 COGs: COG3958 Transketolase C-terminal subunit; InterPro IPR005475:IPR005476; KEGG: ssm:Spirs_2991 transketolase domain protein; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; PRIAM: 1-deoxy-D-xylulose-5-phosphate synthase; SMART: Transketolase-like, pyrimidine-binding domain; SPTR: Transketolase domain protein; IMG reference gene:2503956386; PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; 1-deoxy-D-xylulose-5-phosphate synthase 145678 10494397 Spico_0122 Sphaerochaeta coccoides DSM 17374 1-deoxy-D-xylulose-5-phosphate synthase YP_004410746.1 144731 D 760011 CDS YP_004410747.1 330836106 10494399 complement(146435..147073) 1 NC_015436.1 KEGG: aag:AaeL_AAEL003101 hypothetical protein; SPTR: Suppression of copper sensitivity: lipoprotein modification in; IMG reference gene:2503956388; hypothetical protein 147073 10494399 Spico_0124 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410747.1 146435 R 760011 CDS YP_004410748.1 330836107 10494400 complement(147181..147567) 1 NC_015436.1 COGs: COG1765 redox protein regulator of disulfide bond formation; InterPro IPR003718; KEGG: tsi:TSIB_1698 predicted stress-inducible protein, OsmC/Ohr family; PFAM: Peroxiredoxin, OsmC-like protein; SPTR: uncharacterized protein; IMG reference gene:2503956389; PFAM: OsmC-like protein; OsmC family protein 147567 10494400 Spico_0125 Sphaerochaeta coccoides DSM 17374 OsmC family protein YP_004410748.1 147181 R 760011 CDS YP_004410749.1 330836108 10494401 complement(147602..149458) 1 NC_015436.1 COGs: COG0173 Aspartyl-tRNA synthetase; InterPro IPR004524:IPR004365:IPR004364:IPR004115; KEGG: ssm:Spirs_0312 aspartyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; GAD domain; PRIAM: Aspartate--tRNA ligase; SPTR: Aspartyl-tRNA synthetase; TIGRFAM: Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type; IMG reference gene:2503956390; PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type; aspartyl-tRNA synthetase 149458 10494401 Spico_0126 Sphaerochaeta coccoides DSM 17374 aspartyl-tRNA synthetase YP_004410749.1 147602 R 760011 CDS YP_004410750.1 330836109 10494403 150221..152605 1 NC_015436.1 KEGG: lsg:lse_0723 internalin-like cell wall surface anchor (LPXTG) protein; SPTR: FG-GAP repeat domain protein; IMG reference gene:2503956392; hypothetical protein 152605 10494403 Spico_0128 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410750.1 150221 D 760011 CDS YP_004410751.1 330836110 10494404 complement(152698..153444) 1 NC_015436.1 KEGG: lth:KLTH0C00440g KLTH0C00440p; SPTR: Uncharacterized Fe-S protein; IMG reference gene:2503956393; hypothetical protein 153444 10494404 Spico_0129 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410751.1 152698 R 760011 CDS YP_004410752.1 330836111 10494405 complement(153600..154793) 1 NC_015436.1 KEGG: lhk:LHK_01554 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956394; hypothetical protein 154793 10494405 Spico_0130 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410752.1 153600 R 760011 CDS YP_004410753.1 330836112 10494407 155712..156173 1 NC_015436.1 KEGG: pdi:BDI_2608 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956396; hypothetical protein 156173 10494407 Spico_0132 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410753.1 155712 D 760011 CDS YP_004410754.1 330836113 10494408 156170..157555 1 NC_015436.1 COGs: COG2865 transcriptional regulator protein; InterPro IPR007421; KEGG: mpe:MYPE2570 hypothetical protein; PFAM: ATPase, AAA-4; SPTR: DNA recombinase RecG; IMG reference gene:2503956397; PFAM: Sugar-specific transcriptional regulator TrmB; Divergent AAA domain; transcriptional regulator 157555 10494408 Spico_0133 Sphaerochaeta coccoides DSM 17374 transcriptional regulator YP_004410754.1 156170 D 760011 CDS YP_004410755.1 330836114 10494410 158054..158575 1 NC_015436.1 KEGG: zpr:ZPR_4496 membrane protein; SPTR: uncharacterized protein; IMG reference gene:2503956399; PFAM: Bacterial protein of unknown function (DUF939); hypothetical protein 158575 10494410 Spico_0135 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410755.1 158054 D 760011 CDS YP_004410756.1 330836115 10494411 158576..159118 1 NC_015436.1 COGs: COG2110 phosphatase homologous to the C-terminal domain of histone macroH2A1; InterPro IPR002589; KEGG: aco:Amico_1593 Appr-1-p processing domain protein; PFAM: Appr-1-p processing; SMART: Appr-1-p processing; SPTR: Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1; IMG reference gene:2503956400; PFAM: Macro domain; Appr-1-p processing protein 159118 10494411 Spico_0136 Sphaerochaeta coccoides DSM 17374 Appr-1-p processing protein YP_004410756.1 158576 D 760011 CDS YP_004410757.1 330836116 10494412 complement(159412..160320) 1 NC_015436.1 KEGG: bha:BH1197 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956401; hypothetical protein 160320 10494412 Spico_0137 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410757.1 159412 R 760011 CDS YP_004410758.1 330836117 10494413 complement(160327..160761) 1 NC_015436.1 InterPro IPR007168; KEGG: dbr:Deba_2761 phage shock protein C, PspC; PFAM: Phage shock domain; SPTR: phage shock protein C; IMG reference gene:2503956402; PFAM: PspC domain; PspC domain-containing protein 160761 10494413 Spico_0138 Sphaerochaeta coccoides DSM 17374 PspC domain-containing protein YP_004410758.1 160327 R 760011 CDS YP_004410759.1 330836118 10494414 complement(160786..161157) 1 NC_015436.1 KEGG: gdj:Gdia_0837 methyl-accepting chemotaxis sensory transducer; SPTR: Predicted protein; IMG reference gene:2503956403; hypothetical protein 161157 10494414 Spico_0139 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410759.1 160786 R 760011 CDS YP_004410760.1 330836119 10494415 complement(161185..161838) 1 NC_015436.1 COGs: COG1842 Phage shock protein A (IM30) suppresses sigma54-dependent transcription; InterPro IPR007157; KEGG: dde:Dde_3226 phage shock protein A; PFAM: PspA/IM30; SPTR: Phage shock protein A; IMG reference gene:2503956404; PFAM: PspA/IM30 family; TIGRFAM: phage shock protein A; phage shock protein A, PspA 161838 10494415 Spico_0140 Sphaerochaeta coccoides DSM 17374 phage shock protein A, PspA YP_004410760.1 161185 R 760011 CDS YP_004410761.1 330836120 10494416 162091..163200 1 NC_015436.1 COGs: COG3604 Transcriptional regulator containing GAF AAA-type ATPase and DNA binding domains; InterPro IPR014317:IPR002078:IPR003593; KEGG: dbr:Deba_2764 sigma54 specific transcriptional regulator, Fis family; PFAM: RNA polymerase sigma factor 54, interaction; SMART: ATPase, AAA+ type, core; SPTR: Transcriptional regulator, Fis family / DNA-binding protein Fis; TIGRFAM: Transcription activator PspF; IMG reference gene:2503956405; PFAM: Sigma-54 interaction domain; TIGRFAM: psp operon transcriptional activator PspF; sigma 54 interacting domain-containing protein 163200 10494416 Spico_0141 Sphaerochaeta coccoides DSM 17374 sigma 54 interacting domain-containing protein YP_004410761.1 162091 D 760011 CDS YP_004410762.1 330836121 10494417 complement(163282..163518) 1 NC_015436.1 InterPro IPR007168; KEGG: dma:DMR_38290 hypothetical membrane protein; PFAM: Phage shock domain; SPTR: Phage shock protein C, PspC; IMG reference gene:2503956406; PFAM: PspC domain; PspC domain-containing protein 163518 10494417 Spico_0142 Sphaerochaeta coccoides DSM 17374 PspC domain-containing protein YP_004410762.1 163282 R 760011 CDS YP_004410763.1 330836122 10494418 complement(163522..164241) 1 NC_015436.1 COGs: COG1842 Phage shock protein A (IM30) suppresses sigma54-dependent transcription; InterPro IPR007157; KEGG: dvm:DvMF_1799 phage shock protein A, PspA; PFAM: PspA/IM30; SPTR: Phage shock protein A, PspA; IMG reference gene:2503956407; PFAM: PspA/IM30 family; TIGRFAM: phage shock protein A; phage shock protein A, PspA 164241 10494418 Spico_0143 Sphaerochaeta coccoides DSM 17374 phage shock protein A, PspA YP_004410763.1 163522 R 760011 CDS YP_004410764.1 330836123 10494419 164512..165219 1 NC_015436.1 COGs: COG0313 methyltransferase; HAMAP: Ribosomal RNA small subunit methyltransferase I; InterPro IPR008189:IPR000878; KEGG: ssm:Spirs_0315 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; PFAM: Tetrapyrrole methylase; SPTR: uncharacterized protein; TIGRFAM: Uncharacterised protein family UPF0011; IMG reference gene:2503956408; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family; Ribosomal RNA small subunit methyltransferase I 165219 10494419 Spico_0144 Sphaerochaeta coccoides DSM 17374 Ribosomal RNA small subunit methyltransferase I YP_004410764.1 164512 D 760011 CDS YP_004410765.1 330836124 10494420 165197..165994 1 NC_015436.1 COGs: COG0566 rRNA methylase; InterPro IPR001537; KEGG: ssm:Spirs_0318 tRNA/rRNA methyltransferase (SpoU); PFAM: tRNA/rRNA methyltransferase, SpoU; SPTR: RNA methyltransferase, TrmH family; IMG reference gene:2503956409; PFAM: SpoU rRNA Methylase; tRNA/rRNA methyltransferase SpoU 165994 10494420 Spico_0145 Sphaerochaeta coccoides DSM 17374 tRNA/rRNA methyltransferase SpoU YP_004410765.1 165197 D 760011 CDS YP_004410766.1 330836125 10494421 complement(166090..168144) 1 NC_015436.1 COGs: COG1067 ATP-dependent protease; KEGG: ssm:Spirs_0321 peptidase S16 lon domain protein; SPTR: uncharacterized protein; manually curated; IMG reference gene:2503956410; PFAM: Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: lon-related ATP-dependent protease; peptidase S16 lon domain-containing protein 168144 10494421 Spico_0146 Sphaerochaeta coccoides DSM 17374 peptidase S16 lon domain-containing protein YP_004410766.1 166090 R 760011 CDS YP_004410767.1 330836126 10494422 168199..168960 1 NC_015436.1 COGs: COG0327 conserved hypothetical protein; InterPro IPR002678; KEGG: tde:TDE2208 hypothetical protein; PFAM: NGG1p interacting factor 3, NIF3; SPTR: uncharacterized protein; TIGRFAM: NGG1p interacting factor 3, NIF3; manually curated; IMG reference gene:2503956411; PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family; NGG1p interacting factor 3 protein, NIF3 168960 10494422 Spico_0147 Sphaerochaeta coccoides DSM 17374 NGG1p interacting factor 3 protein, NIF3 YP_004410767.1 168199 D 760011 CDS YP_004410768.1 330836127 10494423 168975..169619 1 NC_015436.1 COGs: COG0597 Lipoprotein signal peptidase; HAMAP: Peptidase A8, signal peptidase II; InterPro IPR001872; KEGG: ssm:Spirs_0323 lipoprotein signal peptidase; PFAM: Peptidase A8, signal peptidase II; SPTR: Signal peptidase II; TIGRFAM: Peptidase A8, signal peptidase II; IMG reference gene:2503956412; PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase; lipoprotein signal peptidase 169619 10494423 Spico_0148 Sphaerochaeta coccoides DSM 17374 lipoprotein signal peptidase YP_004410768.1 168975 D 760011 CDS YP_004410769.1 330836128 10494424 169616..169903 1 NC_015436.1 KEGG: ssm:Spirs_0324 leader peptide processing enzyme; SPTR: uncharacterized protein; IMG reference gene:2503956413; leader peptide processing enzyme 169903 10494424 Spico_0149 Sphaerochaeta coccoides DSM 17374 leader peptide processing enzyme YP_004410769.1 169616 D 760011 CDS YP_004410770.1 330836129 10494425 169915..170952 1 NC_015436.1 KEGG: lic:LIC11034 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956414; hypothetical protein 170952 10494425 Spico_0150 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410770.1 169915 D 760011 CDS YP_004410771.1 330836130 10494426 complement(171071..171583) 1 NC_015436.1 KEGG: fjo:Fjoh_0934 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956415; hypothetical protein 171583 10494426 Spico_0151 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410771.1 171071 R 760011 CDS YP_004410772.1 330836131 10494427 complement(171694..172785) 1 NC_015436.1 COGs: COG0657 Esterase/lipase; InterPro IPR013094; KEGG: amr:AM1_0524 lipase/esterase, SPTR: Lipase/esterase, ; IMG reference gene:2503956416; PFAM: alpha/beta hydrolase fold; hypothetical protein 172785 10494427 Spico_0152 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410772.1 171694 R 760011 CDS YP_004410773.1 330836132 10494428 complement(173021..173398) 1 NC_015436.1 KEGG: taf:THA_161 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956417; hypothetical protein 173398 10494428 Spico_0153 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410773.1 173021 R 760011 CDS YP_004410774.1 330836133 10494429 complement(173382..175328) 1 NC_015436.1 COGs: COG2706 3-carboxymuconate cyclase; InterPro IPR003313:IPR000005:IPR019405:IPR018060; KEGG: ssm:Spirs_3785 transcriptional regulator, AraC family; PFAM: Lactonase, 7-bladed beta propeller; HTH transcriptional regulator, AraC, arabinose-binding/dimerisation; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: 6-phosphogluconolactonase; IMG reference gene:2503956418; PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; 3-carboxy-cis,cis-muconate lactonizing enzyme; AraC family transcriptional regulator 175328 10494429 Spico_0154 Sphaerochaeta coccoides DSM 17374 AraC family transcriptional regulator YP_004410774.1 173382 R 760011 CDS YP_004410775.1 330836134 10494430 175420..176913 1 NC_015436.1 COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR006000:IPR018484:IPR018485; KEGG: xca:xccb100_2505 xylulokinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; SPTR: Xylulokinase; TIGRFAM: Xylulokinase; IMG reference gene:2503956419; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: D-xylulose kinase; xylulokinase 176913 10494430 Spico_0155 Sphaerochaeta coccoides DSM 17374 xylulokinase YP_004410775.1 175420 D 760011 CDS YP_004410776.1 330836135 10494431 176987..178321 1 NC_015436.1 COGs: COG2115 Xylose isomerase; HAMAP: Xylose isomerase; InterPro IPR013452:IPR001998:IPR012307; KEGG: ssm:Spirs_3786 xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain; PRIAM: Xylose isomerase; SPTR: Xylose isomerase 2; TIGRFAM: Xylose isomerase, bacterial type; IMG reference gene:2503956420; PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase; D-xylose isomerase 178321 10494431 Spico_0156 Sphaerochaeta coccoides DSM 17374 D-xylose isomerase YP_004410776.1 176987 D 760011 CDS YP_004410777.1 330836136 10494432 complement(178299..179381) 1 NC_015436.1 COGs: COG4677 Pectin methylesterase; InterPro IPR000070; KEGG: rmr:Rmar_2469 pectinesterase; PFAM: Pectinesterase, catalytic; PRIAM: Pectinesterase; SPTR: Pectinesterase; IMG reference gene:2503956421; PFAM: Pectinesterase; pectinesterase 179381 10494432 Spico_0157 Sphaerochaeta coccoides DSM 17374 pectinesterase YP_004410777.1 178299 R 760011 CDS YP_004410778.1 330836137 10494433 179539..181281 1 NC_015436.1 COGs: COG1785 Alkaline phosphatase; InterPro IPR001952; KEGG: avi:Avi_0605 alkaline phosphatase; PFAM: Alkaline phosphatase; SMART: Alkaline phosphatase; SPTR: Alkaline phosphatase; IMG reference gene:2503956422; PFAM: Alkaline phosphatase; alkaline phosphatase 181281 10494433 Spico_0158 Sphaerochaeta coccoides DSM 17374 alkaline phosphatase YP_004410778.1 179539 D 760011 CDS YP_004410779.1 330836138 10494434 181360..181782 1 NC_015436.1 KEGG: rru:Rru_A1290 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956423; hypothetical protein 181782 10494434 Spico_0159 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410779.1 181360 D 760011 CDS YP_004410780.1 330836139 10494435 181821..182516 1 NC_015436.1 COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: pct:PC1_3918 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; IMG reference gene:2503956424; PFAM: ABC transporter; phosphonate-transporting ATPase 182516 10494435 Spico_0160 Sphaerochaeta coccoides DSM 17374 phosphonate-transporting ATPase YP_004410780.1 181821 D 760011 CDS YP_004410781.1 330836140 10494436 182513..183754 1 NC_015436.1 InterPro IPR003838; KEGG: rru:Rru_A1292 hypothetical protein; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: uncharacterized protein; IMG reference gene:2503956425; PFAM: Predicted permease; hypothetical protein 183754 10494436 Spico_0161 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410781.1 182513 D 760011 CDS YP_004410782.1 330836141 10494437 complement(183934..185286) 1 NC_015436.1 COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR002550:IPR000644:IPR005170; KEGG: cth:Cthe_2870 hypothetical protein; PFAM: Domain of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated domain; SPTR: uncharacterized protein; IMG reference gene:2503956426; PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; hypothetical protein 185286 10494437 Spico_0162 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410782.1 183934 R 760011 CDS YP_004410783.1 330836142 10494438 complement(185447..186070) 1 NC_015436.1 COGs: COG1392 Phosphate transport regulator (distant homolog of PhoU); InterPro IPR018445; KEGG: cce:Ccel_2118 protein of unknown function DUF47; PFAM: Putitive phosphate transport regulator; SPTR: uncharacterized protein; IMG reference gene:2503956427; PFAM: Protein of unknown function DUF47; TIGRFAM: TIGR00153 family protein; phosphate transport regulator 186070 10494438 Spico_0163 Sphaerochaeta coccoides DSM 17374 phosphate transport regulator YP_004410783.1 185447 R 760011 CDS YP_004410784.1 330836143 10494439 complement(186084..187127) 1 NC_015436.1 COGs: COG0306 Phosphate/sulphate permease; InterPro IPR001204; KEGG: efa:EF2442 phosphate transporter family protein; PFAM: Phosphate transporter; SPTR: Phosphate transporter family protein; IMG reference gene:2503956428; PFAM: Phosphate transporter family; phosphate transporter 187127 10494439 Spico_0164 Sphaerochaeta coccoides DSM 17374 phosphate transporter YP_004410784.1 186084 R 760011 CDS YP_004410785.1 330836144 10494440 complement(187433..188290) 1 NC_015436.1 COGs: COG2510 membrane protein; InterPro IPR000620; KEGG: cpy:Cphy_2870 hypothetical protein; PFAM: Drug/metabolite transporter; SPTR: uncharacterized protein; IMG reference gene:2503956429; PFAM: EamA-like transporter family; hypothetical protein 188290 10494440 Spico_0165 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410785.1 187433 R 760011 CDS YP_004410786.1 330836145 10494441 complement(188292..191132) 1 NC_015436.1 KEGG: hor:Hore_08230 WD40 domain protein beta propeller; SPTR: WD40 domain protein beta Propeller; IMG reference gene:2503956430; PFAM: WD40-like Beta Propeller Repeat; hypothetical protein 191132 10494441 Spico_0166 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410786.1 188292 R 760011 CDS YP_004410787.1 330836146 10494442 complement(191237..191500) 1 NC_015436.1 COGs: COG1937 conserved hypothetical protein; InterPro IPR003735; KEGG: apr:Apre_0988 protein of unknown function DUF156; PFAM: Protein of unknown function DUF156; SPTR: uncharacterized protein; IMG reference gene:2503956431; PFAM: Uncharacterised BCR, COG1937; hypothetical protein 191500 10494442 Spico_0167 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410787.1 191237 R 760011 CDS YP_004410788.1 330836147 10494443 complement(191845..193956) 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR011110:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; Two component regulator propeller; SPTR: Alpha-tubulin suppressor and related RCC1 domain-containing protein-like protein; IMG reference gene:2503956432; PFAM: Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 193956 10494443 Spico_0168 Sphaerochaeta coccoides DSM 17374 chromosome condensation regulator RCC1 YP_004410788.1 191845 R 760011 CDS YP_004410789.1 330836148 10494444 complement(194213..194362) 1 NC_015436.1 IMG reference gene:2503956433; hypothetical protein 194362 10494444 Spico_0169 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410789.1 194213 R 760011 CDS YP_004410790.1 330836149 10494445 194484..195365 1 NC_015436.1 InterPro IPR002123; KEGG: pgi:PG1876 hypothetical protein; PFAM: Phospholipid/glycerol acyltransferase; SPTR: Acyltransferase; IMG reference gene:2503956434; phospholipid/glycerol acyltransferase 195365 10494445 Spico_0170 Sphaerochaeta coccoides DSM 17374 phospholipid/glycerol acyltransferase YP_004410790.1 194484 D 760011 CDS YP_004410791.1 330836150 10494446 complement(195399..197135) 1 NC_015436.1 COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR001140:IPR003439:IPR003593; KEGG: ppy:PPE_00122 hypothetical ABC transporter ATP-binding protein; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Hypothetical ABC transporter ATP-binding protein; IMG reference gene:2503956435; PFAM: ABC transporter; ABC transporter transmembrane region; xenobiotic-transporting ATPase 197135 10494446 Spico_0171 Sphaerochaeta coccoides DSM 17374 xenobiotic-transporting ATPase YP_004410791.1 195399 R 760011 CDS YP_004410792.1 330836151 10494447 complement(197132..198865) 1 NC_015436.1 COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR001140:IPR003439:IPR003593; KEGG: ppy:PPE_00123 ABC-type multidrug transport system protein; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC-type multidrug transport system protein; IMG reference gene:2503956436; PFAM: ABC transporter; ABC transporter transmembrane region; xenobiotic-transporting ATPase 198865 10494447 Spico_0172 Sphaerochaeta coccoides DSM 17374 xenobiotic-transporting ATPase YP_004410792.1 197132 R 760011 CDS YP_004410793.1 330836152 10494448 199182..200489 1 NC_015436.1 COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: ssm:Spirs_1368 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein family 1; IMG reference gene:2503956437; PFAM: Bacterial extracellular solute-binding protein; carbohydrate ABC transporter substrate-binding protein 200489 10494448 Spico_0173 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter substrate-binding protein YP_004410793.1 199182 D 760011 CDS YP_004410794.1 330836153 10494449 200553..201482 1 NC_015436.1 COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: ssm:Spirs_1367 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport system inner membrane component; IMG reference gene:2503956438; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 1 201482 10494449 Spico_0174 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter membrane protein 1 YP_004410794.1 200553 D 760011 CDS YP_004410795.1 330836154 10494450 201493..202374 1 NC_015436.1 COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: ssm:Spirs_1366 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport system inner membrane component; IMG reference gene:2503956439; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 2 202374 10494450 Spico_0175 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter membrane protein 2 YP_004410795.1 201493 D 760011 CDS YP_004410796.1 330836155 10494451 202384..203016 1 NC_015436.1 COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR006402:IPR005834; KEGG: ssm:Spirs_1365 HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; IMG reference gene:2503956440; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; HAD-superfamily hydrolase 203016 10494451 Spico_0176 Sphaerochaeta coccoides DSM 17374 HAD-superfamily hydrolase YP_004410796.1 202384 D 760011 CDS YP_004410797.1 330836156 10494452 complement(203058..203828) 1 NC_015436.1 COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR001789:IPR000005:IPR018060; KEGG: bcl:ABC3646 two-component response regulator; PFAM: Signal transduction response regulator, receiver domain; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; Signal transduction response regulator, receiver domain; SPTR: Two-component response regulator; IMG reference gene:2503956441; PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator 203828 10494452 Spico_0177 Sphaerochaeta coccoides DSM 17374 AraC family transcriptional regulator YP_004410797.1 203058 R 760011 CDS YP_004410798.1 330836157 10494453 complement(203838..205652) 1 NC_015436.1 COGs: COG2972 signal transduction protein with a C-terminal ATPase domain; InterPro IPR003660:IPR010559:IPR003594; KEGG: ssm:Spirs_1363 integral membrane sensor signal transduction histidine kinase; PFAM: Signal transduction histidine kinase, internal region; HAMP linker domain; ATPase-like, ATP-binding domain; SMART: HAMP linker domain; SPTR: Predicted signal transduction protein with a C-terminal ATPase domain; IMG reference gene:2503956442; PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; integral membrane sensor signal transduction histidine kinase 205652 10494453 Spico_0178 Sphaerochaeta coccoides DSM 17374 integral membrane sensor signal transduction histidine kinase YP_004410798.1 203838 R 760011 CDS YP_004410799.1 330836158 10494454 206041..206265 1 NC_015436.1 KEGG: cth:Cthe_1655 hypothetical protein; SPTR: Predicted transcriptional regulator; IMG reference gene:2503956443; hypothetical protein 206265 10494454 Spico_0179 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410799.1 206041 D 760011 CDS YP_004410800.1 330836159 10494455 206269..207207 1 NC_015436.1 KEGG: prw:PsycPRwf_1121 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956444; hypothetical protein 207207 10494455 Spico_0180 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410800.1 206269 D 760011 CDS YP_004410801.1 330836160 10494456 207204..211460 1 NC_015436.1 InterPro IPR006935:IPR011639:IPR018306:IPR014001; KEGG: spr:spr1101 type II restriction endonuclease, SMART: Bacteriophage T5, ORF172 DNA-binding; DEAD-like helicase, N-terminal; SPTR: uncharacterized protein; IMG reference gene:2503956445; PFAM: SNF2 family N-terminal domain; Eco57I restriction endonuclease; helicase A859L 211460 10494456 Spico_0181 Sphaerochaeta coccoides DSM 17374 helicase A859L YP_004410801.1 207204 D 760011 CDS YP_004410802.1 330836161 10494457 211474..212505 1 NC_015436.1 COGs: COG3177 conserved hypothetical protein; InterPro IPR003812; KEGG: dsy:DSY0678 hypothetical protein; PFAM: Filamentation induced by cAMP/death on curing-related; SPTR: uncharacterized protein; IMG reference gene:2503956446; PFAM: Fic/DOC family; Fic family protein 212505 10494457 Spico_0182 Sphaerochaeta coccoides DSM 17374 Fic family protein YP_004410802.1 211474 D 760011 CDS YP_004410803.1 330836162 10494458 212627..212833 1 NC_015436.1 KEGG: dhd:Dhaf_4948 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956447; hypothetical protein 212833 10494458 Spico_0183 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410803.1 212627 D 760011 CDS YP_004410804.1 330836163 10494459 212951..214198 1 NC_015436.1 KEGG: bln:Blon_0974 HipA domain protein; SPTR: HipA-like C-terminal domain; IMG reference gene:2503956448; hypothetical protein 214198 10494459 Spico_0184 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410804.1 212951 D 760011 CDS YP_004410805.1 330836164 10494460 complement(214286..214552) 1 NC_015436.1 COGs: COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system; InterPro IPR012753:IPR007712; KEGG: esi:Exig_1264 addiction module antitoxin; PFAM: Plasmid stabilisation system; SPTR: Addiction module toxin RelE; TIGRFAM: Addiction module toxin, RelE/StbE; IMG reference gene:2503956449; PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family; RelE/StbE family addiction module toxin 214552 10494460 Spico_0185 Sphaerochaeta coccoides DSM 17374 RelE/StbE family addiction module toxin YP_004410805.1 214286 R 760011 CDS YP_004410806.1 330836165 10494461 complement(214554..214781) 1 NC_015436.1 KEGG: fnu:FN1099 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956450; PFAM: Ribbon-helix-helix protein, copG family; hypothetical protein 214781 10494461 Spico_0186 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410806.1 214554 R 760011 CDS YP_004410807.1 330836166 10494462 215042..215161 1 NC_015436.1 IMG reference gene:2503956451; hypothetical protein 215161 10494462 Spico_0187 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410807.1 215042 D 760011 CDS YP_004410808.1 330836167 10494463 215700..215804 1 NC_015436.1 IMG reference gene:2503956452; hypothetical protein 215804 10494463 Spico_0188 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410808.1 215700 D 760011 CDS YP_004410809.1 330836168 10494466 217170..217748 1 NC_015436.1 KEGG: bcl:ABC1165 cell surface protein; SPTR: Cell surface protein; IMG reference gene:2503956455; hypothetical protein 217748 10494466 Spico_0190 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410809.1 217170 D 760011 CDS YP_004410810.1 330836169 10494467 217765..218238 1 NC_015436.1 COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR000212; KEGG: bbr:BB4600 ATP-dependent DNA helicase; PFAM: DNA helicase, UvrD/REP type; SPTR: uncharacterized protein; IMG reference gene:2503956456; PFAM: UvrD/REP helicase; UvrD/REP helicase 218238 10494467 Spico_0191 Sphaerochaeta coccoides DSM 17374 UvrD/REP helicase YP_004410810.1 217765 D 760011 CDS YP_004410811.1 330836170 10494468 218281..218508 1 NC_015436.1 KEGG: fnu:FN0210 CopG family transcriptional regulator; SPTR: Toxin-antitoxin system protein; IMG reference gene:2503956457; CopG family transcriptional regulator 218508 10494468 Spico_0192 Sphaerochaeta coccoides DSM 17374 CopG family transcriptional regulator YP_004410811.1 218281 D 760011 CDS YP_004410812.1 330836171 10494469 218509..218775 1 NC_015436.1 COGs: COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system; InterPro IPR012753:IPR007712; KEGG: esi:Exig_1264 addiction module antitoxin; PFAM: Plasmid stabilisation system; SPTR: uncharacterized protein; TIGRFAM: Addiction module toxin, RelE/StbE; IMG reference gene:2503956458; PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family; RelE/StbE family addiction module toxin 218775 10494469 Spico_0193 Sphaerochaeta coccoides DSM 17374 RelE/StbE family addiction module toxin YP_004410812.1 218509 D 760011 CDS YP_004410813.1 330836172 10494470 218970..219767 1 NC_015436.1 COGs: COG3177 conserved hypothetical protein; InterPro IPR003812; KEGG: hmo:HM1_0044 fic family protein, PFAM: Filamentation induced by cAMP/death on curing-related; SPTR: Fic family protein, ; IMG reference gene:2503956459; PFAM: Fic/DOC family; Fic family protein 219767 10494470 Spico_0194 Sphaerochaeta coccoides DSM 17374 Fic family protein YP_004410813.1 218970 D 760011 CDS YP_004410814.1 330836173 10494471 219715..219921 1 NC_015436.1 KEGG: afn:Acfer_1116 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956460; hypothetical protein 219921 10494471 Spico_0195 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410814.1 219715 D 760011 CDS YP_004410815.1 330836174 10494473 220373..220591 1 NC_015436.1 KEGG: cbr:CBG18870 Hypothetical protein CBG18870; SPTR: uncharacterized protein; IMG reference gene:2503956462; hypothetical protein 220591 10494473 Spico_0197 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410815.1 220373 D 760011 CDS YP_004410816.1 330836175 10494474 220737..221942 1 NC_015436.1 KEGG: ele:Elen_0127 DNA binding domain protein, excisionase; SPTR: uncharacterized protein; IMG reference gene:2503956463; PFAM: HipA-like C-terminal domain; DNA binding domain-containing protein, excisionase 221942 10494474 Spico_0198 Sphaerochaeta coccoides DSM 17374 DNA binding domain-containing protein, excisionase YP_004410816.1 220737 D 760011 CDS YP_004410817.1 330836176 10494475 221991..222155 1 NC_015436.1 IMG reference gene:2503956464; hypothetical protein 222155 10494475 Spico_0199 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410817.1 221991 D 760011 CDS YP_004410818.1 330836177 10494477 222428..222766 1 NC_015436.1 InterPro IPR009241; KEGG: ere:EUBREC_3676 hypothetical protein; PFAM: Protein of unknown function DUF891; SPTR: Toxin-antitoxin system, toxin component, RelE family; IMG reference gene:2503956466; PFAM: Phage derived protein Gp49-like (DUF891); hypothetical protein 222766 10494477 Spico_0201 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410818.1 222428 D 760011 CDS YP_004410819.1 330836178 10494478 222763..223062 1 NC_015436.1 InterPro IPR001387; KEGG: ere:EUBREC_3010 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator, XRE family; IMG reference gene:2503956467; PFAM: Helix-turn-helix; helix-turn-helix domain-containing protein 223062 10494478 Spico_0202 Sphaerochaeta coccoides DSM 17374 helix-turn-helix domain-containing protein YP_004410819.1 222763 D 760011 CDS YP_004410820.1 330836179 10494479 complement(223302..224600) 1 NC_015436.1 COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: ssm:Spirs_1023 aminotransferase class I and II; PFAM: Aminotransferase, class I/classII; SPTR: Aminotransferase class I and II; IMG reference gene:2503956468; PFAM: Aminotransferase class I and II; class I and II aminotransferase 224600 10494479 Spico_0203 Sphaerochaeta coccoides DSM 17374 class I and II aminotransferase YP_004410820.1 223302 R 760011 CDS YP_004410821.1 330836180 10494480 complement(224718..225482) 1 NC_015436.1 COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway); InterPro IPR002529; KEGG: mta:Moth_1492 5-carboxymethyl-2-hydroxymuconate delta-isomerase; PFAM: Fumarylacetoacetase, C-terminal-like; PRIAM: 5-carboxymethyl-2-hydroxymuconate Delta-isomerase; SPTR: 5-carboxymethyl-2-hydroxymuconate Delta-isomerase; IMG reference gene:2503956469; PFAM: Domain of unknown function (DUF2437); Fumarylacetoacetate (FAA) hydrolase; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 225482 10494480 Spico_0204 Sphaerochaeta coccoides DSM 17374 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_004410821.1 224718 R 760011 CDS YP_004410822.1 330836181 10494481 225691..226242 1 NC_015436.1 COGs: COG1704 conserved hypothetical protein; InterPro IPR007156; KEGG: ddf:DEFDS_1131 hypothetical protein; PFAM: LemA; SPTR: uncharacterized protein; IMG reference gene:2503956470; PFAM: LemA family; LemA family protein 226242 10494481 Spico_0205 Sphaerochaeta coccoides DSM 17374 LemA family protein YP_004410822.1 225691 D 760011 CDS YP_004410823.1 330836182 10494482 226257..228155 1 NC_015436.1 InterPro IPR018702; KEGG: nde:NIDE3501 hypothetical protein; PFAM: Protein of unknown function DUF2207, membrane; SPTR: uncharacterized protein; IMG reference gene:2503956471; PFAM: Predicted membrane protein (DUF2207); hypothetical protein 228155 10494482 Spico_0206 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410823.1 226257 D 760011 CDS YP_004410824.1 330836183 10494483 228149..228253 1 NC_015436.1 IMG reference gene:2503956472; hypothetical protein 228253 10494483 Spico_0207 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410824.1 228149 D 760011 CDS YP_004410825.1 330836184 10494484 228250..229281 1 NC_015436.1 KEGG: pla:Plav_0415 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956473; PFAM: Protein of unknown function (DUF2804); hypothetical protein 229281 10494484 Spico_0208 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410825.1 228250 D 760011 CDS YP_004410826.1 330836185 10494485 complement(229546..229821) 1 NC_015436.1 COGs: COG0724 RNA-binding protein (RRM domain); InterPro IPR000504; KEGG: ssm:Spirs_2330 RNP-1 like RNA-binding protein; PFAM: RNA recognition motif domain; SMART: RNA recognition motif domain; SPTR: RNP-1 like RNA-binding protein; IMG reference gene:2503956474; PFAM: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); RNP-1 like RNA-binding protein 229821 10494485 Spico_0209 Sphaerochaeta coccoides DSM 17374 RNP-1 like RNA-binding protein YP_004410826.1 229546 R 760011 CDS YP_004410827.1 330836186 10494486 230235..230912 1 NC_015436.1 InterPro IPR000374; KEGG: acl:ACL_1417 integral membrane protein; PFAM: Phosphatidate cytidylyltransferase; SPTR: Integral membrane protein; IMG reference gene:2503956475; PFAM: Cytidylyltransferase; phosphatidate cytidylyltransferase 230912 10494486 Spico_0210 Sphaerochaeta coccoides DSM 17374 phosphatidate cytidylyltransferase YP_004410827.1 230235 D 760011 CDS YP_004410828.1 330836187 10494487 230903..231766 1 NC_015436.1 COGs: COG1836 membrane protein; InterPro IPR002794; KEGG: gct:GC56T3_1039 protein of unknown function DUF92 transmembrane; PFAM: Protein of unknown function DUF92, TMEM19; SPTR: uncharacterized protein; IMG reference gene:2503956476; PFAM: Integral membrane protein DUF92; TIGRFAM: TIGR00297 family protein; hypothetical protein 231766 10494487 Spico_0211 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410828.1 230903 D 760011 CDS YP_004410829.1 330836188 10494488 231936..233573 1 NC_015436.1 COGs: COG0459 Chaperonin GroEL (HSP60 family); HAMAP: Chaperonin Cpn60; InterPro IPR001844:IPR002423; KEGG: ssm:Spirs_3240 chaperonin GroEL; PFAM: Chaperonin Cpn60/TCP-1; SPTR: 60 kDa chaperonin; TIGRFAM: Chaperonin Cpn60; IMG reference gene:2503956477; PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL; molecular chaperone GroEL 233573 10494488 Spico_0212 Sphaerochaeta coccoides DSM 17374 molecular chaperone GroEL YP_004410829.1 231936 D 760011 CDS YP_004410830.1 330836189 10494489 233786..234271 1 NC_015436.1 COGs: COG1862 Preprotein translocase subunit YajC; InterPro IPR003849; KEGG: ssm:Spirs_3238 preprotein translocase, YajC subunit; PFAM: Preprotein translocase YajC; SPTR: Preprotein translocase, YajC subunit; TIGRFAM: Preprotein translocase YajC; IMG reference gene:2503956478; PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit; preprotein translocase subunit YajC 234271 10494489 Spico_0213 Sphaerochaeta coccoides DSM 17374 preprotein translocase subunit YajC YP_004410830.1 233786 D 760011 CDS YP_004410831.1 330836190 10494490 234308..236038 1 NC_015436.1 COGs: COG0342 Preprotein translocase subunit SecD; KEGG: ssm:Spirs_3237 protein-export membrane protein SecD; SPTR: uncharacterized protein; IMG reference gene:2503956479; PFAM: Protein export membrane protein; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein SecD 236038 10494490 Spico_0214 Sphaerochaeta coccoides DSM 17374 protein-export membrane protein SecD YP_004410831.1 234308 D 760011 CDS YP_004410832.1 330836191 10494492 236924..237832 1 NC_015436.1 COGs: COG0761 Penicillin tolerance protein; HAMAP: LytB protein; InterPro IPR003451; KEGG: ccu:Ccur_06870 (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase; PFAM: LytB protein; PRIAM: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SPTR: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; TIGRFAM: LytB protein; IMG reference gene:2503956481; PFAM: LytB protein; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming); 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 237832 10494492 Spico_0216 Sphaerochaeta coccoides DSM 17374 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_004410832.1 236924 D 760011 CDS YP_004410833.1 330836192 10494493 237848..238522 1 NC_015436.1 COGs: COG2344 AT-rich DNA-binding protein; HAMAP: Transcriptional repressor, redox-sensing, Rex; InterPro IPR022876:IPR009718:IPR003781; KEGG: ssm:Spirs_1689 CoA-binding domain protein; PFAM: CoA-binding; Rex DNA-binding, C-terminal; SMART: CoA-binding; SPTR: CoA-binding domain protein; IMG reference gene:2503956482; PFAM: CoA binding domain; DNA-binding protein N-terminus; redox-sensing transcriptional repressor rex 238522 10494493 Spico_0217 Sphaerochaeta coccoides DSM 17374 redox-sensing transcriptional repressor rex YP_004410833.1 237848 D 760011 CDS YP_004410834.1 330836193 10494494 238500..239024 1 NC_015436.1 COGs: COG1956 GAF domain-containing protein; InterPro IPR003018; KEGG: bpu:BPUM_2609 hypothetical protein; PFAM: GAF; SPTR: Hypothetical GAF domain protein; IMG reference gene:2503956483; PFAM: GAF domain; GAF sensor protein 239024 10494494 Spico_0218 Sphaerochaeta coccoides DSM 17374 GAF sensor protein YP_004410834.1 238500 D 760011 CDS YP_004410835.1 330836194 10494495 239396..241162 1 NC_015436.1 COGs: COG0441 Threonyl-tRNA synthetase; InterPro IPR002320:IPR012947:IPR002314:IPR004154; KEGG: ssm:Spirs_3229 threonyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Threonyl/alanyl tRNA synthetase, SAD; Anticodon-binding; SMART: Threonyl/alanyl tRNA synthetase, SAD; SPTR: Threonyl-tRNA synthetase; TIGRFAM: Threonyl-tRNA synthetase, class IIa; IMG reference gene:2503956484; PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: threonyl-tRNA synthetase; Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase 241162 10494495 Spico_0219 Sphaerochaeta coccoides DSM 17374 Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase YP_004410835.1 239396 D 760011 CDS YP_004410836.1 330836195 10494496 241164..242702 1 NC_015436.1 COGs: COG2317 Zn-dependent carboxypeptidase; InterPro IPR001333; KEGG: sta:STHERM_c16020 thermostable carboxypeptidase 1; PFAM: Peptidase M32, carboxypeptidase Taq metallopeptidase; PRIAM: Carboxypeptidase Taq; SPTR: Thermostable carboxypeptidase 1; IMG reference gene:2503956485; PFAM: Carboxypeptidase Taq (M32) metallopeptidase; carboxypeptidase Taq 242702 10494496 Spico_0220 Sphaerochaeta coccoides DSM 17374 carboxypeptidase Taq YP_004410836.1 241164 D 760011 CDS YP_004410837.1 330836196 10494497 242765..243361 1 NC_015436.1 COGs: COG0558 Phosphatidylglycerophosphate synthase; InterPro IPR004570:IPR000462; KEGG: ssm:Spirs_3225 CDP-diacylglycerol/glycerol-3-phosphate3-phospha tidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: uncharacterized protein; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; IMG reference gene:2503956486; PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase 243361 10494497 Spico_0221 Sphaerochaeta coccoides DSM 17374 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase YP_004410837.1 242765 D 760011 CDS YP_004410838.1 330836197 10494498 243358..244170 1 NC_015436.1 InterPro IPR006379; KEGG: ssm:Spirs_3224 HAD-superfamily hydrolase, subfamily IIB; SPTR: hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; IMG reference gene:2503956487; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; HAD-superfamily hydrolase 244170 10494498 Spico_0222 Sphaerochaeta coccoides DSM 17374 HAD-superfamily hydrolase YP_004410838.1 243358 D 760011 CDS YP_004410839.1 330836198 10494503 complement(250138..250947) 1 NC_015436.1 COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: dsy:DSY0105 hypothetical protein; PFAM: ABC-3; SPTR: uncharacterized protein; IMG reference gene:2503956492; PFAM: ABC 3 transport family; ABC transporter 250947 10494503 Spico_0223 Sphaerochaeta coccoides DSM 17374 ABC transporter YP_004410839.1 250138 R 760011 CDS YP_004410840.1 330836199 10494504 complement(250928..251614) 1 NC_015436.1 COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: dhd:Dhaf_0043 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: uncharacterized protein; IMG reference gene:2503956493; PFAM: ABC transporter; Fe(3+)-transporting ATPase 251614 10494504 Spico_0224 Sphaerochaeta coccoides DSM 17374 Fe(3+)-transporting ATPase YP_004410840.1 250928 R 760011 CDS YP_004410841.1 330836200 10494505 251927..252943 1 NC_015436.1 COGs: COG1135 ABC-type metal ion transport system ATPase component; InterPro IPR003439:IPR018449:IPR003593; KEGG: fsu:Fisuc_1036 ABC transporter related protein; PFAM: ABC transporter-like; NIL domain; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; NIL domain; SPTR: Methionine import ATP-binding protein MetN; IMG reference gene:2503956494; PFAM: ABC transporter; NIL domain; sulfate-transporting ATPase 252943 10494505 Spico_0225 Sphaerochaeta coccoides DSM 17374 sulfate-transporting ATPase YP_004410841.1 251927 D 760011 CDS YP_004410842.1 330836201 10494506 252940..253617 1 NC_015436.1 COGs: COG2011 ABC-type metal ion transport system permease component; InterPro IPR000515; KEGG: fsu:Fisuc_1035 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: D-methionine transport system permease MetI; IMG reference gene:2503956495; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 253617 10494506 Spico_0226 Sphaerochaeta coccoides DSM 17374 binding-protein-dependent transport system inner membrane protein YP_004410842.1 252940 D 760011 CDS YP_004410843.1 330836202 10494507 253716..254525 1 NC_015436.1 COGs: COG1464 ABC-type metal ion transport system periplasmic component/surface antigen; InterPro IPR004872; KEGG: fsu:Fisuc_1037 NlpA lipoprotein; PFAM: NLPA lipoprotein; SPTR: NLPA lipoprotein; IMG reference gene:2503956496; PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family; NLPA lipoprotein 254525 10494507 Spico_0227 Sphaerochaeta coccoides DSM 17374 NLPA lipoprotein YP_004410843.1 253716 D 760011 CDS YP_004410844.1 330836203 10494508 254740..256083 1 NC_015436.1 COGs: COG1322 conserved hypothetical protein; InterPro IPR003798; KEGG: bgl:bglu_1g09340 RmuC domain protein; PFAM: DNA recombination RmuC; SPTR: uncharacterized protein; IMG reference gene:2503956497; PFAM: RmuC family; RmuC-domain-containing protein 256083 10494508 Spico_0228 Sphaerochaeta coccoides DSM 17374 RmuC-domain-containing protein YP_004410844.1 254740 D 760011 CDS YP_004410845.1 330836204 10494509 256147..257166 1 NC_015436.1 COGs: COG0078 Ornithine carbamoyltransferase; HAMAP: Ornithine carbamoyltransferase; InterPro IPR002292:IPR006132:IPR006131; KEGG: pmo:Pmob_0068 ornithine carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain; Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; PRIAM: Ornithine carbamoyltransferase; SPTR: Ornithine carbamoyltransferase; TIGRFAM: Ornithine carbamoyltransferase; IMG reference gene:2503956498; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase; ornithine carbamoyltransferase 257166 10494509 Spico_0229 Sphaerochaeta coccoides DSM 17374 ornithine carbamoyltransferase YP_004410845.1 256147 D 760011 CDS YP_004410846.1 330836205 10494510 257253..258383 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR011110:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; Two component regulator propeller; SPTR: Alpha-tubulin suppressor and related RCC1 domain-containing protein-like protein; IMG reference gene:2503956499; PFAM: Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 258383 10494510 Spico_0230 Sphaerochaeta coccoides DSM 17374 chromosome condensation regulator RCC1 YP_004410846.1 257253 D 760011 CDS YP_004410847.1 330836206 10494511 258810..259934 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; SPTR: Alpha-tubulin suppressor and related RCC1 domain-containing protein-like protein; IMG reference gene:2503956500; PFAM: Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 259934 10494511 Spico_0231 Sphaerochaeta coccoides DSM 17374 chromosome condensation regulator RCC1 YP_004410847.1 258810 D 760011 CDS YP_004410848.1 330836207 10494512 complement(260034..260477) 1 NC_015436.1 COGs: COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); InterPro IPR008331; KEGG: tpp:TPASS_1038 bacterioferrin TpF1; PFAM: Ferritin/Dps protein; SPTR: Antigen TyF1; IMG reference gene:2503956501; PFAM: Ferritin-like domain; ferritin 260477 10494512 Spico_0232 Sphaerochaeta coccoides DSM 17374 ferritin YP_004410848.1 260034 R 760011 CDS YP_004410849.1 330836208 10494513 260689..262191 1 NC_015436.1 COGs: COG3604 Transcriptional regulator containing GAF AAA-type ATPase and DNA binding domains; InterPro IPR003018:IPR002078:IPR002197:IPR003593; KEGG: dat:HRM2_00790 FhlA; PFAM: RNA polymerase sigma factor 54, interaction; GAF; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core; GAF; SPTR: FhlA; IMG reference gene:2503956502; PFAM: GAF domain; Sigma-54 interaction domain; Fis family transcriptional regulator 262191 10494513 Spico_0233 Sphaerochaeta coccoides DSM 17374 Fis family transcriptional regulator YP_004410849.1 260689 D 760011 CDS YP_004410850.1 330836209 10494514 262542..265148 1 NC_015436.1 COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR017730:IPR004176:IPR003959:IPR013093:IPR 019489:IPR003593; KEGG: ssm:Spirs_0929 ATP-dependent chaperone ClpB; PFAM: ATPase, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: ATP-dependent chaperone protein ClpB; TIGRFAM: Chaperonin ClpB; IMG reference gene:2503956503; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB; ATP-dependent chaperone ClpB 265148 10494514 Spico_0234 Sphaerochaeta coccoides DSM 17374 ATP-dependent chaperone ClpB YP_004410850.1 262542 D 760011 CDS YP_004410851.1 330836210 10494515 265300..266025 1 NC_015436.1 COGs: COG1811 Uncharacterized membrane protein possible Na+ channel or pump; InterPro IPR007563; KEGG: brm:Bmur_0947 protein of unknown function DUF554; PFAM: Protein of unknown function DUF554; SPTR: uncharacterized protein; IMG reference gene:2503956504; PFAM: Protein of unknown function (DUF554); hypothetical protein 266025 10494515 Spico_0235 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410851.1 265300 D 760011 CDS YP_004410852.1 330836211 10494516 complement(266047..267516) 1 NC_015436.1 COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933:IPR011650; KEGG: mxa:MXAN_2289 hypothetical protein; PFAM: Peptidase M20; Peptidase M20, dimerisation; PRIAM: Gly-Xaa carboxypeptidase; SPTR: Peptidase, M20E (Gly-X carboxypeptidase) subfamily; IMG reference gene:2503956505; PFAM: Peptidase M20/M25/M40; Peptidase dimerisation domain; Gly-Xaa carboxypeptidase 267516 10494516 Spico_0236 Sphaerochaeta coccoides DSM 17374 Gly-Xaa carboxypeptidase YP_004410852.1 266047 R 760011 CDS YP_004410853.1 330836212 10494517 267517..267693 1 NC_015436.1 KEGG: cja:CJA_2050 generic methyl-transferase; IMG reference gene:2503956506; hypothetical protein 267693 10494517 Spico_0237 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410853.1 267517 D 760011 CDS YP_004410854.1 330836213 10494518 267677..268309 1 NC_015436.1 InterPro IPR001647; KEGG: cts:Ctha_0156 transcriptional regulator, TetR family; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family; IMG reference gene:2503956507; PFAM: Bacterial regulatory proteins, tetR family; TetR family transcriptional regulator 268309 10494518 Spico_0238 Sphaerochaeta coccoides DSM 17374 TetR family transcriptional regulator YP_004410854.1 267677 D 760011 CDS YP_004410855.1 330836214 10494519 complement(268371..270602) 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; IMG reference gene:2503956508; PFAM: Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 270602 10494519 Spico_0239 Sphaerochaeta coccoides DSM 17374 chromosome condensation regulator RCC1 YP_004410855.1 268371 R 760011 CDS YP_004410856.1 330836215 10494520 complement(270820..273357) 1 NC_015436.1 COGs: COG0058 Glucan phosphorylase; InterPro IPR011833:IPR000811; KEGG: ssm:Spirs_0940 glycogen/starch/alpha-glucan phosphorylase; PFAM: Glycosyl transferase, family 35; SPTR: Phosphorylase; TIGRFAM: Glycogen/starch/alpha-glucan phosphorylase; IMG reference gene:2503956509; PFAM: Carbohydrate phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases; glycogen phosphorylase 273357 10494520 Spico_0240 Sphaerochaeta coccoides DSM 17374 glycogen phosphorylase YP_004410856.1 270820 R 760011 CDS YP_004410857.1 330836216 10494521 273374..273535 1 NC_015436.1 IMG reference gene:2503956510; hypothetical protein 273535 10494521 Spico_0241 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410857.1 273374 D 760011 CDS YP_004410858.1 330836217 10494522 273532..273738 1 NC_015436.1 KEGG: pan:PODANSg09393 hypothetical protein; IMG reference gene:2503956511; hypothetical protein 273738 10494522 Spico_0242 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410858.1 273532 D 760011 CDS YP_004410859.1 330836218 10494523 complement(273785..275590) 1 NC_015436.1 COGs: COG5421 Transposase; InterPro IPR002559; KEGG: cob:COB47_1677 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; IMG reference gene:2503956512; PFAM: Transposase DDE domain; transposase IS4 family protein 275590 10494523 Spico_0243 Sphaerochaeta coccoides DSM 17374 transposase IS4 family protein YP_004410859.1 273785 R 760011 CDS YP_004410860.1 330836219 10494525 276010..276903 1 NC_015436.1 InterPro IPR018004; KEGG: dak:DaAHT2_2136 KilA, N-terminal/APSES-type HTH DNA-binding domain protein; PFAM: KilA, N-terminal/APSES-type HTH, DNA-binding; SPTR: KilA domain protein; IMG reference gene:2503956514; PFAM: KilA-N domain; KilA, /APSES-type HTH DNA-binding domain-containing protein 276903 10494525 Spico_0245 Sphaerochaeta coccoides DSM 17374 KilA, /APSES-type HTH DNA-binding domain-containing protein YP_004410860.1 276010 D 760011 CDS YP_004410861.1 330836220 10494526 277367..277567 1 NC_015436.1 KEGG: bca:BCE_0370 hypothetical protein; SPTR: Cytosine-specific methyltransferase; IMG reference gene:2503956515; PFAM: Helix-turn-helix; hypothetical protein 277567 10494526 Spico_0246 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410861.1 277367 D 760011 CDS YP_004410862.1 330836221 10494527 277564..279117 1 NC_015436.1 InterPro IPR011639; KEGG: seu:SEQ_0757 modification methylase; PRIAM: Site-specific DNA-methyltransferase (adenine-specific); SPTR: uncharacterized protein; IMG reference gene:2503956516; PFAM: Ribosomal RNA adenine dimethylase; Eco57I restriction endonuclease; adenine-specific DNA-methyltransferase 279117 10494527 Spico_0247 Sphaerochaeta coccoides DSM 17374 adenine-specific DNA-methyltransferase YP_004410862.1 277564 D 760011 CDS YP_004410863.1 330836222 10494528 279059..279970 1 NC_015436.1 InterPro IPR009528; KEGG: seu:SEQ_0758 type II restriction enzyme; PFAM: Restriction endonuclease, type II, BsuBI/PstI, C-terminal; PRIAM: Type II site-specific deoxyribonuclease; SPTR: type II restriction enzyme; IMG reference gene:2503956517; PFAM: BsuBI/PstI restriction endonuclease C-terminus; type II site-specific deoxyribonuclease 279970 10494528 Spico_0248 Sphaerochaeta coccoides DSM 17374 type II site-specific deoxyribonuclease YP_004410863.1 279059 D 760011 CDS YP_004410864.1 330836223 10494529 complement(280142..280891) 1 NC_015436.1 InterPro IPR013525; KEGG: tde:TDE0701 hypothetical protein; PFAM: ABC-2 type transporter; SPTR: Membrane protein, ; IMG reference gene:2503956518; PFAM: ABC-2 type transporter; ABC transporter 280891 10494529 Spico_0249 Sphaerochaeta coccoides DSM 17374 ABC transporter YP_004410864.1 280142 R 760011 CDS YP_004410865.1 330836224 10494530 complement(280888..281613) 1 NC_015436.1 COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: tde:TDE0702 ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Polyamine-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; IMG reference gene:2503956519; PFAM: ABC transporter; polyamine-transporting ATPase 281613 10494530 Spico_0250 Sphaerochaeta coccoides DSM 17374 polyamine-transporting ATPase YP_004410865.1 280888 R 760011 CDS YP_004410866.1 330836225 10494531 complement(281610..281837) 1 NC_015436.1 InterPro IPR006339:IPR007159; KEGG: tde:TDE0703 AbrB family transcriptional regulator; PFAM: Transcription regulator AbrB/SpoV, predicted; SMART: Transcription regulator AbrB/SpoV, predicted; SPTR: Transcriptional regulator, AbrB family; TIGRFAM: Transcription regulator AbrB; IMG reference gene:2503956520; PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family; AbrB family transcriptional regulator 281837 10494531 Spico_0251 Sphaerochaeta coccoides DSM 17374 AbrB family transcriptional regulator YP_004410866.1 281610 R 760011 CDS YP_004410867.1 330836226 10494533 282269..282802 1 NC_015436.1 KEGG: mem:Memar_2263 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956522; hypothetical protein 282802 10494533 Spico_0253 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410867.1 282269 D 760011 CDS YP_004410868.1 330836227 10494534 282813..283169 1 NC_015436.1 KEGG: ccb:Clocel_1507 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956523; hypothetical protein 283169 10494534 Spico_0254 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410868.1 282813 D 760011 CDS YP_004410869.1 330836228 10494535 283166..283942 1 NC_015436.1 InterPro IPR015018; KEGG: sss:SSUSC84_0626 hypothetical protein; PFAM: Protein of unknown function DUF1905; SPTR: uncharacterized protein; IMG reference gene:2503956524; PFAM: Domain of unknown function (DUF1905); hypothetical protein 283942 10494535 Spico_0255 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410869.1 283166 D 760011 CDS YP_004410870.1 330836229 10494536 283960..284367 1 NC_015436.1 COGs: COG2764 conserved hypothetical protein; KEGG: lsp:Bsph_4693 protein PhnB; SPTR: Protein phnB; IMG reference gene:2503956525; PFAM: 3-demethylubiquinone-9 3-methyltransferase; protein PhnB 284367 10494536 Spico_0256 Sphaerochaeta coccoides DSM 17374 protein PhnB YP_004410870.1 283960 D 760011 CDS YP_004410871.1 330836230 10494538 complement(284799..285719) 1 NC_015436.1 COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR013096:IPR000005:IPR018060; KEGG: csh:Closa_3990 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; Cupin 2, conserved barrel; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator, AraC/XylS family; IMG reference gene:2503956527; PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator 285719 10494538 Spico_0258 Sphaerochaeta coccoides DSM 17374 AraC family transcriptional regulator YP_004410871.1 284799 R 760011 CDS YP_004410872.1 330836231 10494539 285870..287126 1 NC_015436.1 COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: csh:Closa_3984 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: sugar-binding periplasmic protein; IMG reference gene:2503956528; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein 287126 10494539 Spico_0259 Sphaerochaeta coccoides DSM 17374 ABC transporter substrate-binding protein YP_004410872.1 285870 D 760011 CDS YP_004410873.1 330836232 10494540 287236..288144 1 NC_015436.1 COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: csh:Closa_3983 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: ABC-type sugar transport system, permease component; IMG reference gene:2503956529; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 1 288144 10494540 Spico_0260 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter membrane protein 1 YP_004410873.1 287236 D 760011 CDS YP_004410874.1 330836233 10494541 288154..289023 1 NC_015436.1 COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: csh:Closa_3982 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Sugar permease; IMG reference gene:2503956530; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 2 289023 10494541 Spico_0261 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter membrane protein 2 YP_004410874.1 288154 D 760011 CDS YP_004410875.1 330836234 10494542 289026..291053 1 NC_015436.1 KEGG: cai:Caci_0892 tetratricopeptide TPR_4; SPTR: uncharacterized protein; IMG reference gene:2503956531; hypothetical protein 291053 10494542 Spico_0262 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410875.1 289026 D 760011 CDS YP_004410876.1 330836235 10494543 291085..292167 1 NC_015436.1 InterPro IPR002575; KEGG: csh:Closa_3988 aminoglycoside phosphotransferase; PFAM: Aminoglycoside phosphotransferase; SPTR: uncharacterized protein; IMG reference gene:2503956532; PFAM: Phosphotransferase enzyme family; aminoglycoside phosphotransferase 292167 10494543 Spico_0263 Sphaerochaeta coccoides DSM 17374 aminoglycoside phosphotransferase YP_004410876.1 291085 D 760011 CDS YP_004410877.1 330836236 10494545 292772..293419 1 NC_015436.1 KEGG: cpy:Cphy_1854 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956534; hypothetical protein 293419 10494545 Spico_0265 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410877.1 292772 D 760011 CDS YP_004410878.1 330836237 10494546 293564..295090 1 NC_015436.1 COGs: COG0753 Catalase; InterPro IPR018028:IPR010582; KEGG: mla:Mlab_1574 hypothetical protein; PFAM: Catalase-related subgroup; Catalase-related immune responsive; PRIAM: Catalase; SPTR: Catalase; IMG reference gene:2503956535; PFAM: Catalase; Catalase-related immune-responsive; catalase 295090 10494546 Spico_0266 Sphaerochaeta coccoides DSM 17374 catalase YP_004410878.1 293564 D 760011 CDS YP_004410879.1 330836238 10494547 295368..296669 1 NC_015436.1 COGs: COG1373 ATPase (AAA+ superfamily); KEGG: swo:Swol_0027 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956536; hypothetical protein 296669 10494547 Spico_0267 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410879.1 295368 D 760011 CDS YP_004410880.1 330836239 10494548 296824..298131 1 NC_015436.1 COGs: COG0527 Aspartokinase; InterPro IPR001341:IPR001048; KEGG: ssm:Spirs_0574 aspartate kinase; PFAM: Aspartate/glutamate/uridylate kinase; SPTR: Aspartokinase; TIGRFAM: Aspartate kinase domain; IMG reference gene:2503956537; PFAM: Amino acid kinase; TIGRFAM: aspartate kinase; aspartate kinase 298131 10494548 Spico_0268 Sphaerochaeta coccoides DSM 17374 aspartate kinase YP_004410880.1 296824 D 760011 CDS YP_004410881.1 330836240 10494549 complement(298217..299311) 1 NC_015436.1 COGs: COG3839 ABC-type sugar transport systems ATPase components; InterPro IPR003439:IPR013611:IPR003593; KEGG: ssm:Spirs_0579 ABC transporter related protein; PFAM: ABC transporter-like; Transport-associated OB, type 2; PRIAM: Glycerol-3-phosphate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Sugar ABC transporter; IMG reference gene:2503956538; PFAM: ABC transporter; TOBE domain; carbohydrate ABC transporter ATP-binding protein 299311 10494549 Spico_0269 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter ATP-binding protein YP_004410881.1 298217 R 760011 CDS YP_004410882.1 330836241 10494550 299547..300053 1 NC_015436.1 COGs: COG0252 L-asparaginase/ Glu-tRNAGln amidotransferase subunit D; InterPro IPR006034; KEGG: ade:Adeh_2142 asparaginase; PFAM: Asparaginase/glutaminase; SPTR: Asparaginase; IMG reference gene:2503956539; PFAM: Asparaginase; asparaginase/glutaminase 300053 10494550 Spico_0270 Sphaerochaeta coccoides DSM 17374 asparaginase/glutaminase YP_004410882.1 299547 D 760011 CDS YP_004410883.1 330836242 10494551 300128..301798 1 NC_015436.1 COGs: COG2759 Formyltetrahydrofolate synthetase; HAMAP: Formate-tetrahydrofolate ligase, FTHFS; InterPro IPR000559; KEGG: dhd:Dhaf_0555 formate--tetrahydrofolate ligase; PFAM: Formate-tetrahydrofolate ligase, FTHFS; PRIAM: Formate--tetrahydrofolate ligase; SPTR: Formate--tetrahydrofolate ligase; IMG reference gene:2503956540; PFAM: Formate--tetrahydrofolate ligase; formate-tetrahydrofolate ligase 301798 10494551 Spico_0271 Sphaerochaeta coccoides DSM 17374 formate-tetrahydrofolate ligase YP_004410883.1 300128 D 760011 CDS YP_004410884.1 330836243 10494553 302992..304032 1 NC_015436.1 COGs: COG1840 ABC-type Fe3+ transport system periplasmic component; InterPro IPR006059; KEGG: kol:Kole_1985 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein family 1; IMG reference gene:2503956542; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein 304032 10494553 Spico_0272 Sphaerochaeta coccoides DSM 17374 ABC transporter substrate-binding protein YP_004410884.1 302992 D 760011 CDS YP_004410885.1 330836244 10494554 304220..306451 1 NC_015436.1 COGs: COG1178 ABC-type Fe3+ transport system permease component; InterPro IPR000515; KEGG: kol:Kole_1984 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503956543; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 306451 10494554 Spico_0273 Sphaerochaeta coccoides DSM 17374 binding-protein-dependent transport system inner membrane protein YP_004410885.1 304220 D 760011 CDS YP_004410886.1 330836245 10494555 306462..307562 1 NC_015436.1 COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003439:IPR013611:IPR003593; KEGG: kol:Kole_1983 ABC transporter related; PFAM: ABC transporter-like; Transport-associated OB, type 2; PRIAM: Polyamine-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC-type spermidine/putrescine transport systems, ATPase components; IMG reference gene:2503956544; PFAM: ABC transporter; TOBE domain; polyamine-transporting ATPase 307562 10494555 Spico_0274 Sphaerochaeta coccoides DSM 17374 polyamine-transporting ATPase YP_004410886.1 306462 D 760011 CDS YP_004410887.1 330836246 10494556 complement(307737..308171) 1 NC_015436.1 InterPro IPR000835; KEGG: csh:Closa_1534 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator, MarR family; IMG reference gene:2503956545; regulatory protein MarR 308171 10494556 Spico_0275 Sphaerochaeta coccoides DSM 17374 regulatory protein MarR YP_004410887.1 307737 R 760011 CDS YP_004410888.1 330836247 10494557 complement(308168..309625) 1 NC_015436.1 COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR006076; KEGG: gpb:HDN1F_29420 similar to phytoene dehydrogenase; PFAM: FAD dependent oxidoreductase; SPTR: Phytoene dehydrogenase and related proteins; IMG reference gene:2503956546; PFAM: Flavin containing amine oxidoreductase; FAD dependent oxidoreductase 309625 10494557 Spico_0276 Sphaerochaeta coccoides DSM 17374 FAD dependent oxidoreductase YP_004410888.1 308168 R 760011 CDS YP_004410889.1 330836248 10494558 310059..311984 1 NC_015436.1 COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR000873; KEGG: ssm:Spirs_3695 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Long-chain-fatty-acid--CoA ligase; SPTR: uncharacterized protein; IMG reference gene:2503956547; PFAM: AMP-binding enzyme; long-chain-fatty-acid--CoA ligase 311984 10494558 Spico_0277 Sphaerochaeta coccoides DSM 17374 long-chain-fatty-acid--CoA ligase YP_004410889.1 310059 D 760011 CDS YP_004410890.1 330836249 10494559 312310..312969 1 NC_015436.1 KEGG: llo:LLO_3092 homologous to SidE substrate of Dot/Icm secretion system; SPTR: Homologous to SidE substrate of Dot/Icm secretion system; IMG reference gene:2503956548; hypothetical protein 312969 10494559 Spico_0278 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410890.1 312310 D 760011 CDS YP_004410891.1 330836250 10494560 312971..314212 1 NC_015436.1 KEGG: ssm:Spirs_1518 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956549; hypothetical protein 314212 10494560 Spico_0279 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410891.1 312971 D 760011 CDS YP_004410892.1 330836251 10494561 314323..315564 1 NC_015436.1 COGs: COG1482 Phosphomannose isomerase; InterPro IPR001250; KEGG: dol:Dole_2015 mannose-6-phosphate isomerase, class I; PFAM: Mannose-6-phosphate isomerase, type I; PRIAM: Mannose-6-phosphate isomerase; SPTR: Mannose-6-phosphate isomerase, class I; TIGRFAM: Mannose-6-phosphate isomerase, type I; IMG reference gene:2503956550; PFAM: Phosphomannose isomerase type I; TIGRFAM: mannose-6-phosphate isomerase, class I; mannose-6-phosphate isomerase 315564 10494561 Spico_0280 Sphaerochaeta coccoides DSM 17374 mannose-6-phosphate isomerase YP_004410892.1 314323 D 760011 CDS YP_004410893.1 330836252 10494562 315612..316307 1 NC_015436.1 COGs: COG0847 DNA polymerase III epsilon subunit and related 3'-5' exonuclease; InterPro IPR006054:IPR013520:IPR006055; KEGG: vpr:Vpar_0406 exonuclease RNase T and DNA polymerase III; PFAM: Exonuclease, RNase T/DNA polymerase III; SMART: Exonuclease; SPTR: Exonuclease; TIGRFAM: DNA polymerase III, epsilon subunit; IMG reference gene:2503956551; PFAM: Exonuclease; DNA polymerase III subunit epsilon 316307 10494562 Spico_0281 Sphaerochaeta coccoides DSM 17374 DNA polymerase III subunit epsilon YP_004410893.1 315612 D 760011 CDS YP_004410894.1 330836253 10494563 complement(316296..317216) 1 NC_015436.1 InterPro IPR000326; KEGG: ssm:Spirs_0904 phosphoesterase PA-phosphatase related protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; SPTR: Membrane-associated phospholipid phosphatase; IMG reference gene:2503956552; PFAM: PAP2 superfamily; phosphoesterase PA-phosphatase-like protein 317216 10494563 Spico_0282 Sphaerochaeta coccoides DSM 17374 phosphoesterase PA-phosphatase-like protein YP_004410894.1 316296 R 760011 CDS YP_004410895.1 330836254 10494565 317619..318692 1 NC_015436.1 COGs: COG0482 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain; HAMAP: tRNA-specific 2-thiouridylase; InterPro IPR004506; KEGG: emi:Emin_0088 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA-specific 2-thiouridylase; SPTR: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; TIGRFAM: tRNA-specific 2-thiouridylase; IMG reference gene:2503956554; PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; tRNA-specific 2-thiouridylase mnmA 318692 10494565 Spico_0283 Sphaerochaeta coccoides DSM 17374 tRNA-specific 2-thiouridylase mnmA YP_004410895.1 317619 D 760011 CDS YP_004410896.1 330836255 10494566 318803..319612 1 NC_015436.1 COGs: COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; HAMAP: Glucosamine-6-phosphate isomerase; InterPro IPR004547:IPR006148; KEGG: pdi:BDI_3568 glucosamine-6-phosphate deaminase; PFAM: Glucosamine/galactosamine-6-phosphate isomerase; PRIAM: Glucosamine-6-phosphate deaminase; SPTR: Glucosamine-6-phosphate deaminase; TIGRFAM: Glucosamine-6-phosphate isomerase; IMG reference gene:2503956555; PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: glucosamine-6-phosphate isomerase; glucosamine-6-phosphate deaminase 319612 10494566 Spico_0284 Sphaerochaeta coccoides DSM 17374 glucosamine-6-phosphate deaminase YP_004410896.1 318803 D 760011 CDS YP_004410897.1 330836256 10494567 complement(319620..320438) 1 NC_015436.1 COGs: COG0584 Glycerophosphoryl diester phosphodiesterase; InterPro IPR004129; KEGG: dge:Dgeo_1506 glycerophosphoryl diester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase; SPTR: Glycerophosphoryl diester phosphodiesterase; IMG reference gene:2503956556; PFAM: Glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 320438 10494567 Spico_0285 Sphaerochaeta coccoides DSM 17374 glycerophosphoryl diester phosphodiesterase YP_004410897.1 319620 R 760011 CDS YP_004410898.1 330836257 10494568 complement(320525..321298) 1 NC_015436.1 COGs: COG0565 rRNA methylase; InterPro IPR001537; KEGG: ssm:Spirs_2304 RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase, SpoU; SPTR: RNA methyltransferase, TrmH family, group 1; IMG reference gene:2503956557; PFAM: SpoU rRNA Methylase; TIGRFAM: RNA methyltransferase, TrmH family, group 1; tRNA/rRNA methyltransferase SpoU 321298 10494568 Spico_0286 Sphaerochaeta coccoides DSM 17374 tRNA/rRNA methyltransferase SpoU YP_004410898.1 320525 R 760011 CDS YP_004410899.1 330836258 10494569 321307..322557 1 NC_015436.1 COGs: COG0628 permease; InterPro IPR002549; KEGG: ssm:Spirs_2291 protein of unknown function UPF0118; PFAM: Uncharacterised protein family UPF0118; SPTR: uncharacterized protein; IMG reference gene:2503956558; PFAM: Domain of unknown function DUF20; hypothetical protein 322557 10494569 Spico_0287 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410899.1 321307 D 760011 CDS YP_004410900.1 330836259 10494570 322581..323564 1 NC_015436.1 COGs: COG1194 A/G-specific DNA glycosylase; InterPro IPR003265; KEGG: mem:Memar_1721 HhH-GPD family protein; PFAM: HhH-GPD domain; SMART: HhH-GPD domain; SPTR: HhH-GPD family protein; IMG reference gene:2503956559; PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; HhH-GPD family protein 323564 10494570 Spico_0288 Sphaerochaeta coccoides DSM 17374 HhH-GPD family protein YP_004410900.1 322581 D 760011 CDS YP_004410901.1 330836260 10494571 complement(323584..324513) 1 NC_015436.1 InterPro IPR006750; KEGG: cpy:Cphy_1299 hypothetical protein; PFAM: Protein of unknown function DUF606; SPTR: uncharacterized protein; IMG reference gene:2503956560; PFAM: Protein of unknown function, DUF606; hypothetical protein 324513 10494571 Spico_0289 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410901.1 323584 R 760011 CDS YP_004410902.1 330836261 10494572 324682..325284 1 NC_015436.1 COGs: COG0560 Phosphoserine phosphatase; InterPro IPR011863:IPR005834; KEGG: sta:STHERM_c21790 hypothetical protein; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: uncharacterized protein; TIGRFAM: Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein; IMG reference gene:2503956561; TIGRFAM: phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein; bifunctional phosphoserine phosphatase/homoserine phosphotransferase 325284 10494572 Spico_0290 Sphaerochaeta coccoides DSM 17374 bifunctional phosphoserine phosphatase/homoserine phosphotransferase YP_004410902.1 324682 D 760011 CDS YP_004410903.1 330836262 10494573 325523..325891 1 NC_015436.1 COGs: COG1734 DnaK suppressor protein; InterPro IPR000962; KEGG: ssm:Spirs_0464 transcriptional regulator, TraR/DksA family; SPTR: C4 zinc finger domain protein, DksA/TraR family; IMG reference gene:2503956562; PFAM: Prokaryotic dksA/traR C4-type zinc finger; TraR/DksA family transcriptional regulator 325891 10494573 Spico_0291 Sphaerochaeta coccoides DSM 17374 TraR/DksA family transcriptional regulator YP_004410903.1 325523 D 760011 CDS YP_004410904.1 330836263 10494574 complement(325935..326615) 1 NC_015436.1 COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001279; KEGG: gka:GK2439 hypothetical protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; SPTR: Beta-lactamase domain protein; IMG reference gene:2503956563; PFAM: Metallo-beta-lactamase superfamily; beta-lactamase domain-containing protein 326615 10494574 Spico_0292 Sphaerochaeta coccoides DSM 17374 beta-lactamase domain-containing protein YP_004410904.1 325935 R 760011 CDS YP_004410905.1 330836264 10494575 complement(326618..327199) 1 NC_015436.1 InterPro IPR005580; KEGG: ssm:Spirs_0468 DbpA RNA-binding domain protein; PFAM: DbpA, RNA-binding; SPTR: DbpA RNA binding domain protein; IMG reference gene:2503956564; PFAM: DbpA RNA binding domain; DbpA RNA-binding domain-containing protein 327199 10494575 Spico_0293 Sphaerochaeta coccoides DSM 17374 DbpA RNA-binding domain-containing protein YP_004410905.1 326618 R 760011 CDS YP_004410906.1 330836265 10494576 327490..328680 1 NC_015436.1 KEGG: ssm:Spirs_0472 hypothetical protein; SPTR: Chromosome assembly protein homolog; IMG reference gene:2503956565; hypothetical protein 328680 10494576 Spico_0294 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410906.1 327490 D 760011 CDS YP_004410907.1 330836266 10494577 328677..330191 1 NC_015436.1 COGs: COG1559 periplasmic solute-binding protein; InterPro IPR003770; KEGG: msv:Mesil_0225 aminodeoxychorismate lyase; PFAM: Uncharacterised protein family UPF0755; SPTR: Aminodeoxychorismate lyase; TIGRFAM: Uncharacterised protein family UPF0755; IMG reference gene:2503956566; PFAM: YceG-like family; TIGRFAM: conserved hypothetical protein, YceG family; aminodeoxychorismate lyase 330191 10494577 Spico_0295 Sphaerochaeta coccoides DSM 17374 aminodeoxychorismate lyase YP_004410907.1 328677 D 760011 CDS YP_004410908.1 330836267 10494578 330207..331004 1 NC_015436.1 COGs: COG3315 O-Methyltransferase involved in polyketide biosynthesis; KEGG: ols:Olsu_0657 tetracenomycin polyketide synthesis O-methyltransferase TcmP; SPTR: uncharacterized protein; IMG reference gene:2503956567; PFAM: Leucine carboxyl methyltransferase; tetracenomycin polyketide synthesis O-methyltransferase TcmP 331004 10494578 Spico_0296 Sphaerochaeta coccoides DSM 17374 tetracenomycin polyketide synthesis O-methyltransferase TcmP YP_004410908.1 330207 D 760011 CDS YP_004410909.1 330836268 10494580 331356..333446 1 NC_015436.1 COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641; KEGG: fjo:Fjoh_0727 patatin; PFAM: Patatin/Phospholipase A2-related; SPTR: patatin-like phospholipase; IMG reference gene:2503956569; PFAM: Patatin-like phospholipase; patatin 333446 10494580 Spico_0297 Sphaerochaeta coccoides DSM 17374 patatin YP_004410909.1 331356 D 760011 CDS YP_004410910.1 330836269 10494581 complement(333436..334053) 1 NC_015436.1 COGs: COG1636 conserved hypothetical protein; InterPro IPR003828; KEGG: ssm:Spirs_2754 protein of unknown function DUF208; PFAM: Protein of unknown function DUF208; SPTR: uncharacterized protein; IMG reference gene:2503956570; PFAM: Uncharacterized BCR, COG1636; hypothetical protein 334053 10494581 Spico_0298 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410910.1 333436 R 760011 CDS YP_004410911.1 330836270 10494582 334143..335042 1 NC_015436.1 KEGG: ccb:Clocel_0599 TPR repeat-containing protein; SPTR: TPR repeat-containing protein; IMG reference gene:2503956571; hypothetical protein 335042 10494582 Spico_0299 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410911.1 334143 D 760011 CDS YP_004410912.1 330836271 10494583 335078..336610 1 NC_015436.1 COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; InterPro IPR001736; KEGG: cpe:CPE0365 cardiolipin synthetase; PFAM: Phospholipase D/Transphosphatidylase; SMART: Phospholipase D/Transphosphatidylase; SPTR: uncharacterized protein; IMG reference gene:2503956572; PFAM: Phospholipase D Active site motif; phospholipase D/Transphosphatidylase 336610 10494583 Spico_0300 Sphaerochaeta coccoides DSM 17374 phospholipase D/Transphosphatidylase YP_004410912.1 335078 D 760011 CDS YP_004410913.1 330836272 10494584 complement(336636..337526) 1 NC_015436.1 COGs: COG1814 Uncharacterized membrane protein; InterPro IPR008217; KEGG: brm:Bmur_1173 protein of unknown function DUF125 transmembrane; PFAM: Domain of unknown function DUF125, transmembrane; SPTR: uncharacterized protein; IMG reference gene:2503956573; PFAM: VIT family; hypothetical protein 337526 10494584 Spico_0301 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410913.1 336636 R 760011 CDS YP_004410914.1 330836273 10494585 337758..338042 1 NC_015436.1 InterPro IPR000831; KEGG: sta:STHERM_c18770 hypothetical protein; PFAM: Trp repressor; SPTR: uncharacterized protein; IMG reference gene:2503956574; PFAM: Trp repressor protein; TIGRFAM: trp operon repressor, proteobacterial; Trp repressor 338042 10494585 Spico_0302 Sphaerochaeta coccoides DSM 17374 Trp repressor YP_004410914.1 337758 D 760011 CDS YP_004410915.1 330836274 10494586 338152..339180 1 NC_015436.1 InterPro IPR005242; KEGG: cpy:Cphy_1959 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956575; PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein; hypothetical protein 339180 10494586 Spico_0303 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410915.1 338152 D 760011 CDS YP_004410916.1 330836275 10494587 339240..340448 1 NC_015436.1 COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: bfs:BF3235 glycosyl transferase; PFAM: Glycosyl transferase, group 1; SPTR: uncharacterized protein; IMG reference gene:2503956576; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase 340448 10494587 Spico_0304 Sphaerochaeta coccoides DSM 17374 group 1 glycosyl transferase YP_004410916.1 339240 D 760011 CDS YP_004410917.1 330836276 10494588 complement(340512..342416) 1 NC_015436.1 COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR011545:IPR001650:IPR014001; KEGG: mba:Mbar_A0145 ATP-dependent RNA helicase; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: ATP-dependent RNA helicase; IMG reference gene:2503956577; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; DEAD/DEAH box helicase 342416 10494588 Spico_0305 Sphaerochaeta coccoides DSM 17374 DEAD/DEAH box helicase YP_004410917.1 340512 R 760011 CDS YP_004410918.1 330836277 10494589 complement(342509..343462) 1 NC_015436.1 KEGG: tde:TDE1337 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956578; PFAM: Protein of unknown function (DUF2804); hypothetical protein 343462 10494589 Spico_0306 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410918.1 342509 R 760011 CDS YP_004410919.1 330836278 10494590 complement(343548..345170) 1 NC_015436.1 InterPro IPR000297; KEGG: ssm:Spirs_1830 PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SPTR: uncharacterized protein; IMG reference gene:2503956579; PFAM: PPIC-type PPIASE domain; PpiC-type peptidyl-prolyl cis-trans isomerase 345170 10494590 Spico_0307 Sphaerochaeta coccoides DSM 17374 PpiC-type peptidyl-prolyl cis-trans isomerase YP_004410919.1 343548 R 760011 CDS YP_004410920.1 330836279 10494591 complement(345290..346216) 1 NC_015436.1 KEGG: dhd:Dhaf_0871 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956580; hypothetical protein 346216 10494591 Spico_0308 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410920.1 345290 R 760011 CDS YP_004410921.1 330836280 10494593 complement(346700..347104) 1 NC_015436.1 KEGG: vcn:VOLCADRAFT_103453 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956582; hypothetical protein 347104 10494593 Spico_0309 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410921.1 346700 R 760011 CDS YP_004410922.1 330836281 10494594 347357..348376 1 NC_015436.1 COGs: COG1840 ABC-type Fe3+ transport system periplasmic component; InterPro IPR006059; KEGG: aco:Amico_1577 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: ABC transporter, periplasmic binding protein, thiB subfamily; IMG reference gene:2503956583; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein 348376 10494594 Spico_0310 Sphaerochaeta coccoides DSM 17374 ABC transporter substrate-binding protein YP_004410922.1 347357 D 760011 CDS YP_004410923.1 330836282 10494595 348529..350178 1 NC_015436.1 COGs: COG1178 ABC-type Fe3+ transport system permease component; InterPro IPR000515; KEGG: aco:Amico_1576 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503956584; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 350178 10494595 Spico_0311 Sphaerochaeta coccoides DSM 17374 binding-protein-dependent transport system inner membrane protein YP_004410923.1 348529 D 760011 CDS YP_004410924.1 330836283 10494596 350194..351279 1 NC_015436.1 COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003439:IPR013611:IPR003593; KEGG: csh:Closa_0645 ABC transporter related protein; PFAM: ABC transporter-like; Transport-associated OB, type 2; PRIAM: Polyamine-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; IMG reference gene:2503956585; PFAM: ABC transporter; TOBE domain; polyamine-transporting ATPase 351279 10494596 Spico_0312 Sphaerochaeta coccoides DSM 17374 polyamine-transporting ATPase YP_004410924.1 350194 D 760011 CDS YP_004410925.1 330836284 10494597 351321..352127 1 NC_015436.1 COGs: COG0657 Esterase/lipase; KEGG: pjd:Pjdr2_5261 pectin acetylesterase; SPTR: Endo-1,4-beta-xylanase B; IMG reference gene:2503956586; PFAM: Prolyl oligopeptidase; alpha/beta hydrolase fold; pectin acetylesterase 352127 10494597 Spico_0313 Sphaerochaeta coccoides DSM 17374 pectin acetylesterase YP_004410925.1 351321 D 760011 CDS YP_004410926.1 330836285 10494598 352232..353209 1 NC_015436.1 KEGG: acl:ACL_0438 Fic-domain-containing protein; SPTR: Fic-domain containing protein; IMG reference gene:2503956587; hypothetical protein 353209 10494598 Spico_0314 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410926.1 352232 D 760011 CDS YP_004410927.1 330836286 10494599 complement(353199..353984) 1 NC_015436.1 COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: ele:Elen_0663 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-); IMG reference gene:2503956588; PFAM: ABC transporter; amino acid ABC transporter ATP-binding protein 353984 10494599 Spico_0315 Sphaerochaeta coccoides DSM 17374 amino acid ABC transporter ATP-binding protein YP_004410927.1 353199 R 760011 CDS YP_004410928.1 330836287 10494600 complement(353981..354616) 1 NC_015436.1 COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: tjr:TherJR_0418 polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease, 3-TM domain, His/Glu/Gln/Arg/opine family; IMG reference gene:2503956589; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family; amino acid ABC transporter permease 354616 10494600 Spico_0316 Sphaerochaeta coccoides DSM 17374 amino acid ABC transporter permease YP_004410928.1 353981 R 760011 CDS YP_004410929.1 330836288 10494601 complement(354685..355491) 1 NC_015436.1 COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001638; KEGG: tjr:TherJR_0419 extracellular solute-binding protein family 3; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; SPTR: Extracellular solute-binding protein family 3; IMG reference gene:2503956590; PFAM: Bacterial extracellular solute-binding proteins, family 3; amino acid ABC transporter substrate-binding protein 355491 10494601 Spico_0317 Sphaerochaeta coccoides DSM 17374 amino acid ABC transporter substrate-binding protein YP_004410929.1 354685 R 760011 CDS YP_004410930.1 330836289 10494602 355828..356970 1 NC_015436.1 COGs: COG1883 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit; InterPro IPR005661; KEGG: csh:Closa_2394 sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; PRIAM: Oxaloacetate decarboxylase; SPTR: Oxaloacetate decarboxylase, beta subunit; TIGRFAM: Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; IMG reference gene:2503956591; PFAM: subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; sodium ion-translocating decarboxylase subunit beta 356970 10494602 Spico_0318 Sphaerochaeta coccoides DSM 17374 sodium ion-translocating decarboxylase subunit beta YP_004410930.1 355828 D 760011 CDS YP_004410931.1 330836290 10494603 356981..357109 1 NC_015436.1 InterPro IPR005899; PFAM: Sodium ion-translocating decarboxylase; SPTR: uncharacterized protein; IMG reference gene:2503956592; PFAM: Oxaloacetate decarboxylase, gamma chain; sodium pump decarboxylase gamma subunit 357109 10494603 Spico_0319 Sphaerochaeta coccoides DSM 17374 sodium pump decarboxylase gamma subunit YP_004410931.1 356981 D 760011 CDS YP_004410932.1 330836291 10494604 357727..358266 1 NC_015436.1 COGs: COG0440 Acetolactate synthase small (regulatory) subunit; InterPro IPR002912:IPR019455:IPR004789; KEGG: cth:Cthe_2517 acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit, C-terminal; Amino acid-binding ACT; SPTR: Acetolactate synthase, small subunit; TIGRFAM: Acetolactate synthase, small subunit; IMG reference gene:2503956593; PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit; acetolactate synthase small subunit 358266 10494604 Spico_0320 Sphaerochaeta coccoides DSM 17374 acetolactate synthase small subunit YP_004410932.1 357727 D 760011 CDS YP_004410933.1 330836292 10494605 358385..359377 1 NC_015436.1 COGs: COG0059 Ketol-acid reductoisomerase; HAMAP: Acetohydroxy acid isomeroreductase; InterPro IPR013023:IPR013116:IPR000506; KEGG: ccb:Clocel_1325 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase, catalytic; Acetohydroxy acid isomeroreductase C-terminal; PRIAM: Ketol-acid reductoisomerase; SPTR: Ketol-acid reductoisomerase; TIGRFAM: Acetohydroxy acid isomeroreductase; IMG reference gene:2503956594; PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase; ketol-acid reductoisomerase 359377 10494605 Spico_0321 Sphaerochaeta coccoides DSM 17374 ketol-acid reductoisomerase YP_004410933.1 358385 D 760011 CDS YP_004410934.1 330836293 10494606 359498..361117 1 NC_015436.1 COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891:IPR013709:IPR005671; KEGG: amt:Amet_3458 2-isopropylmalate synthase; PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; PRIAM: 2-isopropylmalate synthase; SMART: 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; SPTR: 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase, bacterial type; IMG reference gene:2503956595; PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase, bacterial type; 2-isopropylmalate synthase 361117 10494606 Spico_0322 Sphaerochaeta coccoides DSM 17374 2-isopropylmalate synthase YP_004410934.1 359498 D 760011 CDS YP_004410935.1 330836294 10494607 361110..362729 1 NC_015436.1 COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891:IPR013709:IPR005675; KEGG: ccb:Clocel_1321 2-isopropylmalate synthase/homocitrate synthase; PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; PRIAM: (R)-citramalate synthase; SMART: 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; SPTR: 2-isopropylmalate synthase/homocitrate synthase; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase-related; IMG reference gene:2503956596; PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase; 2-isopropylmalate synthase 362729 10494607 Spico_0323 Sphaerochaeta coccoides DSM 17374 2-isopropylmalate synthase YP_004410935.1 361110 D 760011 CDS YP_004410936.1 330836295 10494608 362743..364011 1 NC_015436.1 COGs: COG0065 3-isopropylmalate dehydratase large subunit; HAMAP: Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic; InterPro IPR011826:IPR001030:IPR011823:IPR006251; KEGG: ckl:CKL_2159 3-isopropylmalate dehydratase large subunit; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; SPTR: 3-isopropylmalate dehydratase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit, prokaryotic; Homoaconitase/3-isopropylmalate dehydratase, large subunit, prokaryotic; Homoaconitase/3-isopropylmalate dehydratase, large subunit, subgroup; IMG reference gene:2503956597; PFAM: Aconitase (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit; homoaconitate hydratase; 3-isopropylmalate dehydratase large subunit 364011 10494608 Spico_0324 Sphaerochaeta coccoides DSM 17374 3-isopropylmalate dehydratase large subunit YP_004410936.1 362743 D 760011 CDS YP_004410937.1 330836296 10494609 364013..364537 1 NC_015436.1 COGs: COG0066 3-isopropylmalate dehydratase small subunit; HAMAP: 3-isopropylmalate dehydratase small subunit; InterPro IPR000573:IPR011824:IPR011827; KEGG: ere:EUBREC_1995 3-isopropylmalate dehydratase small subunit; PFAM: Aconitase A/isopropylmalate dehydratase small subunit, swivel; PRIAM: (R)-2-methylmalate dehydratase; SPTR: 3-isopropylmalate dehydratase, small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit, bacterial-like; 3-isopropylmalate dehydratase, small subunit, subgroup; IMG reference gene:2503956598; PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; 3-isopropylmalate dehydratase small subunit 364537 10494609 Spico_0325 Sphaerochaeta coccoides DSM 17374 3-isopropylmalate dehydratase small subunit YP_004410937.1 364013 D 760011 CDS YP_004410938.1 330836297 10494610 364534..365607 1 NC_015436.1 COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase; HAMAP: Isopropylmalate dehydrogenase; InterPro IPR004429:IPR001804; KEGG: cbe:Cbei_0216 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; PRIAM: 3-isopropylmalate dehydrogenase; SPTR: 3-isopropylmalate dehydrogenase; TIGRFAM: Isopropylmalate dehydrogenase; IMG reference gene:2503956599; PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 365607 10494610 Spico_0326 Sphaerochaeta coccoides DSM 17374 3-isopropylmalate dehydrogenase YP_004410938.1 364534 D 760011 CDS YP_004410939.1 330836298 10494611 365690..367423 1 NC_015436.1 COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; HAMAP: Dihydroxy-acid dehydratase; InterPro IPR004404:IPR000581; KEGG: amt:Amet_3401 dihydroxy-acid dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; PRIAM: Dihydroxy-acid dehydratase; SPTR: Dihydroxy-acid dehydratase; TIGRFAM: Dihydroxy-acid dehydratase; IMG reference gene:2503956600; PFAM: Dehydratase; TIGRFAM: dihydroxy-acid dehydratase; dihydroxyacid dehydratase 367423 10494611 Spico_0327 Sphaerochaeta coccoides DSM 17374 dihydroxyacid dehydratase YP_004410939.1 365690 D 760011 CDS YP_004410940.1 330836299 10494612 367466..369139 1 NC_015436.1 COGs: COG0028 Thiamine pyrophosphate-requiring protein; InterPro IPR012001:IPR012000:IPR011766:IPR012846; KEGG: cpy:Cphy_3347 acetolactate synthase, large subunit, biosynthetic type; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; PRIAM: Acetolactate synthase; SPTR: Acetolactate synthase; TIGRFAM: Acetolactate synthase, large subunit, biosynthetic; IMG reference gene:2503956601; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; acetolactate synthase large subunit 369139 10494612 Spico_0328 Sphaerochaeta coccoides DSM 17374 acetolactate synthase large subunit YP_004410940.1 367466 D 760011 CDS YP_004410941.1 330836300 10494613 complement(369170..370669) 1 NC_015436.1 InterPro IPR011435; KEGG: eel:EUBELI_01841 hypothetical protein; PFAM: Protein of unknown function DUF1538; SPTR: uncharacterized protein; IMG reference gene:2503956602; PFAM: Protein of unknown function (DUF1538); hypothetical protein 370669 10494613 Spico_0329 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410941.1 369170 R 760011 CDS YP_004410942.1 330836301 10494614 complement(370923..372170) 1 NC_015436.1 InterPro IPR011701; KEGG: cno:NT01CX_1080 major facilitator superfamily protein; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily protein; IMG reference gene:2503956603; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein 372170 10494614 Spico_0330 Sphaerochaeta coccoides DSM 17374 major facilitator superfamily protein YP_004410942.1 370923 R 760011 CDS YP_004410943.1 330836302 10494615 complement(372167..372991) 1 NC_015436.1 COGs: COG0561 hydrolase of the HAD superfamily; InterPro IPR013200:IPR000150:IPR006379; KEGG: cbe:Cbei_0458 Cof-like hydrolase; PFAM: HAD superfamily hydrolase-like, type 3; SPTR: Cof-like hydrolase; TIGRFAM: Cof protein; HAD-superfamily hydrolase, subfamily IIB; IMG reference gene:2503956604; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB; cof family hydrolase 372991 10494615 Spico_0331 Sphaerochaeta coccoides DSM 17374 cof family hydrolase YP_004410943.1 372167 R 760011 CDS YP_004410944.1 330836303 10494616 complement(373214..376066) 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR011110:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Listeria/Bacterioides repeat; Two component regulator propeller; Regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; TIGRFAM: Listeria/Bacterioides repeat; IMG reference gene:2503956605; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; TIGRFAM: Listeria/Bacterioides repeat; cell wall/surface repeat protein 376066 10494616 Spico_0332 Sphaerochaeta coccoides DSM 17374 cell wall/surface repeat protein YP_004410944.1 373214 R 760011 CDS YP_004410945.1 330836304 10494617 complement(376385..378745) 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR011110:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Listeria/Bacterioides repeat; Two component regulator propeller; Regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; IMG reference gene:2503956606; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; hypothetical protein 378745 10494617 Spico_0333 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410945.1 376385 R 760011 CDS YP_004410946.1 330836305 10494618 complement(379215..380963) 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR000408; KEGG: ttm:Tthe_2617 S-layer domain protein; PFAM: Listeria/Bacterioides repeat; Regulator of chromosome condensation, RCC1; SPTR: Alpha-tubulin suppressor and related RCC1 domain-containing protein-like protein; IMG reference gene:2503956607; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; hypothetical protein 380963 10494618 Spico_0334 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410946.1 379215 R 760011 CDS YP_004410947.1 330836306 10494619 381522..382511 1 NC_015436.1 COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR001761; KEGG: ssm:Spirs_3421 periplasmic binding protein/LacI transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; SPTR: Periplasmic binding protein/LacI transcriptional regulator; IMG reference gene:2503956608; PFAM: family; monosaccharide ABC transporter substrate-binding protein, CUT2 family 382511 10494619 Spico_0335 Sphaerochaeta coccoides DSM 17374 monosaccharide ABC transporter substrate-binding protein, CUT2 family YP_004410947.1 381522 D 760011 CDS YP_004410948.1 330836307 10494620 382593..384125 1 NC_015436.1 COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: ssm:Spirs_3420 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; IMG reference gene:2503956609; PFAM: ABC transporter; monosaccharide ABC transporter ATP-binding protein, CUT2 family 384125 10494620 Spico_0336 Sphaerochaeta coccoides DSM 17374 monosaccharide ABC transporter ATP-binding protein, CUT2 family YP_004410948.1 382593 D 760011 CDS YP_004410949.1 330836308 10494621 384122..385210 1 NC_015436.1 COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: ssm:Spirs_3419 inner-membrane translocator; PFAM: ABC transporter permease; SPTR: Inner-membrane translocator; IMG reference gene:2503956610; PFAM: Branched-chain amino acid transport system / permease component; monosaccharide ABC transporter membrane protein, CUT2 family 385210 10494621 Spico_0337 Sphaerochaeta coccoides DSM 17374 monosaccharide ABC transporter membrane protein, CUT2 family YP_004410949.1 384122 D 760011 CDS YP_004410950.1 330836309 10494622 385207..386247 1 NC_015436.1 COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: ssm:Spirs_3418 inner-membrane translocator; PFAM: ABC transporter permease; SPTR: Inner-membrane translocator; IMG reference gene:2503956611; PFAM: Branched-chain amino acid transport system / permease component; monosaccharide ABC transporter membrane protein, CUT2 family 386247 10494622 Spico_0338 Sphaerochaeta coccoides DSM 17374 monosaccharide ABC transporter membrane protein, CUT2 family YP_004410950.1 385207 D 760011 CDS YP_004410951.1 330836310 10494623 386262..387845 1 NC_015436.1 COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484; KEGG: csh:Closa_0680 ATPase BadF/BadG/BcrA/BcrD type; PFAM: Carbohydrate kinase, FGGY, N-terminal; SPTR: Sugar (Pentulose and hexulose) kinases; IMG reference gene:2503956612; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; Carbohydrate kinase, FGGY 387845 10494623 Spico_0339 Sphaerochaeta coccoides DSM 17374 Carbohydrate kinase, FGGY YP_004410951.1 386262 D 760011 CDS YP_004410952.1 330836311 10494624 387944..389437 1 NC_015436.1 COGs: COG3534 Alpha-L-arabinofuranosidase; InterPro IPR010720; KEGG: sta:STHERM_c14770 alpha-N-arabinofuranosidase; PFAM: Alpha-L-arabinofuranosidase, C-terminal; PRIAM: Alpha-N-arabinofuranosidase; SMART: Alpha-L-arabinofuranosidase, C-terminal; SPTR: Alpha-N-arabinofuranosidase; IMG reference gene:2503956613; PFAM: Alpha-L-arabinofuranosidase C-terminus; alpha-N-arabinofuranosidase 389437 10494624 Spico_0340 Sphaerochaeta coccoides DSM 17374 alpha-N-arabinofuranosidase YP_004410952.1 387944 D 760011 CDS YP_004410953.1 330836312 10494625 complement(389535..390590) 1 NC_015436.1 COGs: COG1609 Transcriptional regulators; InterPro IPR000843; KEGG: sta:STHERM_c20570 transcriptional regulatory protein; PFAM: HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI; SPTR: Transcriptional regulatory protein; IMG reference gene:2503956614; PFAM: Bacterial regulatory proteins, lacI family; family; LacI family transcriptional regulator 390590 10494625 Spico_0341 Sphaerochaeta coccoides DSM 17374 LacI family transcriptional regulator YP_004410953.1 389535 R 760011 CDS YP_004410954.1 330836313 10494626 390948..392432 1 NC_015436.1 COGs: COG2160 L-arabinose isomerase; HAMAP: L-arabinose isomerase; InterPro IPR003762; KEGG: ccb:Clocel_1254 L-arabinose isomerase; PFAM: L-arabinose isomerase; PRIAM: L-arabinose isomerase; SPTR: uncharacterized protein; IMG reference gene:2503956615; PFAM: L-arabinose isomerase; L-arabinose isomerase C-terminal domain; L-arabinose isomerase 392432 10494626 Spico_0342 Sphaerochaeta coccoides DSM 17374 L-arabinose isomerase YP_004410954.1 390948 D 760011 CDS YP_004410955.1 330836314 10494627 392471..393166 1 NC_015436.1 COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: cpf:CPF_0648 L-ribulose-5-phosphate 4-epimerase; PFAM: Class II aldolase/adducin, N-terminal; PRIAM: L-ribulose-5-phosphate 4-epimerase; SPTR: L-ribulose-5-phosphate 4-epimerase; IMG reference gene:2503956616; PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase; L-ribulose 5-phosphate 4-epimerase 393166 10494627 Spico_0343 Sphaerochaeta coccoides DSM 17374 L-ribulose 5-phosphate 4-epimerase YP_004410955.1 392471 D 760011 CDS YP_004410956.1 330836315 10494628 complement(393326..396013) 1 NC_015436.1 COGs: COG1454 Alcohol dehydrogenase class IV; InterPro IPR015590:IPR001670; KEGG: cyj:Cyan7822_1604 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type; Aldehyde dehydrogenase domain; PRIAM: Acetaldehyde dehydrogenase (acetylating); SPTR: Iron-containing alcohol dehydrogenase; IMG reference gene:2503956617; PFAM: Aldehyde dehydrogenase; Iron-containing alcohol dehydrogenase; alcohol dehydrogenase 396013 10494628 Spico_0344 Sphaerochaeta coccoides DSM 17374 alcohol dehydrogenase YP_004410956.1 393326 R 760011 CDS YP_004410957.1 330836316 10494629 complement(396268..397527) 1 NC_015436.1 COGs: COG4769 membrane protein; InterPro IPR010898; KEGG: tde:TDE1926 hypothetical protein; PFAM: Heptaprenyl diphosphate synthase component I; SPTR: Membrane protein, ; IMG reference gene:2503956618; PFAM: Heptaprenyl diphosphate synthase component I; heptaprenyl diphosphate synthase component I 397527 10494629 Spico_0345 Sphaerochaeta coccoides DSM 17374 heptaprenyl diphosphate synthase component I YP_004410957.1 396268 R 760011 CDS YP_004410958.1 330836317 10494630 397937..398716 1 NC_015436.1 COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: ssm:Spirs_2695 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SPTR: Transcriptional regulatory protein; IMG reference gene:2503956619; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator 398716 10494630 Spico_0346 Sphaerochaeta coccoides DSM 17374 winged helix family two component transcriptional regulator YP_004410958.1 397937 D 760011 CDS YP_004410959.1 330836318 10494631 398756..399484 1 NC_015436.1 COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: ssm:Spirs_2695 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SPTR: Transcriptional regulatory protein; IMG reference gene:2503956620; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator 399484 10494631 Spico_0347 Sphaerochaeta coccoides DSM 17374 winged helix family two component transcriptional regulator YP_004410959.1 398756 D 760011 CDS YP_004410960.1 330836319 10494632 399481..401085 1 NC_015436.1 COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: bcv:Bcav_1275 histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Histidine kinase; IMG reference gene:2503956621; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase 401085 10494632 Spico_0348 Sphaerochaeta coccoides DSM 17374 integral membrane sensor signal transduction histidine kinase YP_004410960.1 399481 D 760011 CDS YP_004410961.1 330836320 10494633 401221..402639 1 NC_015436.1 COGs: COG0469 Pyruvate kinase; InterPro IPR015793:IPR015795:IPR001697; KEGG: cob:COB47_1291 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, C-terminal-like; PRIAM: Pyruvate kinase; SPTR: Pyruvate kinase; TIGRFAM: Pyruvate kinase; IMG reference gene:2503956622; PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase; pyruvate kinase 402639 10494633 Spico_0349 Sphaerochaeta coccoides DSM 17374 pyruvate kinase YP_004410961.1 401221 D 760011 CDS YP_004410962.1 330836321 10494634 complement(402774..404567) 1 NC_015436.1 COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR007329:IPR003953:IPR010960; KEGG: ssm:Spirs_3607 flavocytochrome c; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; FMN-binding; PRIAM: Succinate dehydrogenase; SMART: FMN-binding; SPTR: Flavocytochrome c; TIGRFAM: Flavocytochrome c; IMG reference gene:2503956623; PFAM: FAD binding domain; FMN-binding domain; TIGRFAM: flavocytochrome c; flavocytochrome c 404567 10494634 Spico_0350 Sphaerochaeta coccoides DSM 17374 flavocytochrome c YP_004410962.1 402774 R 760011 CDS YP_004410963.1 330836322 10494635 404887..406020 1 NC_015436.1 COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; KEGG: dhd:Dhaf_2612 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956624; PFAM: NMT1/THI5 like; hypothetical protein 406020 10494635 Spico_0351 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410963.1 404887 D 760011 CDS YP_004410964.1 330836323 10494636 406017..406832 1 NC_015436.1 COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: dhd:Dhaf_2613 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport system inner membrane component; IMG reference gene:2503956625; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 406832 10494636 Spico_0352 Sphaerochaeta coccoides DSM 17374 binding-protein-dependent transport system inner membrane protein YP_004410964.1 406017 D 760011 CDS YP_004410965.1 330836324 10494637 406829..407461 1 NC_015436.1 COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: dsa:Desal_1874 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: uncharacterized protein; IMG reference gene:2503956626; PFAM: ABC transporter; Fe(3+)-transporting ATPase 407461 10494637 Spico_0353 Sphaerochaeta coccoides DSM 17374 Fe(3+)-transporting ATPase YP_004410965.1 406829 D 760011 CDS YP_004410966.1 330836325 10494638 complement(407592..409325) 1 NC_015436.1 COGs: COG4624 Iron only hydrogenase large subunit C-terminal domain; InterProIPR001041:IPR019574:IPR001450:IPR004108:IPR 003149:IPR013352; KEGG: cbt:CLH_1644 iron hydrogenase 1; PFAM: Iron hydrogenase, large subunit, C-terminal; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Ferredoxin; 4Fe-4S binding domain; Iron hydrogenase, small subunit-like; PRIAM: Ferredoxin hydrogenase; SMART: Iron hydrogenase, small subunit-like; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; SPTR: Hydrogenase, Fe-only; TIGRFAM: Iron hydrogenase, subset; IMG reference gene:2503956627; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Iron only hydrogenase large subunit, C-terminal domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Iron hydrogenase small subunit; TIGRFAM: hydrogenase, Fe-only; hydrogenase, Fe-only 409325 10494638 Spico_0354 Sphaerochaeta coccoides DSM 17374 hydrogenase, Fe-only YP_004410966.1 407592 R 760011 CDS YP_004410967.1 330836326 10494639 complement(409319..411166) 1 NC_015436.1 COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR019575:IPR013027; KEGG: cbt:CLH_1645 glutamate synthase (NADPH) small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; PRIAM: Glutamate synthase (NADPH); SMART: NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; SPTR: NADH ubiquinone oxidoreductase, F subunit, iron sulfur binding; IMG reference gene:2503956628; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Pyridine nucleotide-disulphide oxidoreductase; glutamate synthase (NADPH) 411166 10494639 Spico_0355 Sphaerochaeta coccoides DSM 17374 glutamate synthase (NADPH) YP_004410967.1 409319 R 760011 CDS YP_004410968.1 330836327 10494640 complement(411507..412094) 1 NC_015436.1 COGs: COG5523 integral membrane protein; InterPro IPR010380; KEGG: clj:CLJU_c32220 hypothetical protein; PFAM: Protein of unknown function DUF975; SPTR: uncharacterized protein; IMG reference gene:2503956629; PFAM: Protein of unknown function (DUF975); hypothetical protein 412094 10494640 Spico_0356 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410968.1 411507 R 760011 CDS YP_004410969.1 330836328 10494642 412416..413024 1 NC_015436.1 COGs: COG2094 3-methyladenine DNA glycosylase; HAMAP: Methylpurine-DNA glycosylase (MPG); InterPro IPR003180; KEGG: dsy:DSY3705 3-methyladenine DNA glycosylase; PFAM: Methylpurine-DNA glycosylase (MPG); PRIAM: DNA-3-methyladenine glycosylase II; SPTR: 3-methyladenine DNA glycosylase; TIGRFAM: Methylpurine-DNA glycosylase (MPG); IMG reference gene:2503956631; PFAM: Methylpurine-DNA glycosylase (MPG); TIGRFAM: DNA-3-methyladenine glycosylase (3mg); 3-methyladenine DNA glycosylase 413024 10494642 Spico_0358 Sphaerochaeta coccoides DSM 17374 3-methyladenine DNA glycosylase YP_004410969.1 412416 D 760011 CDS YP_004410970.1 330836329 10494643 complement(413078..415399) 1 NC_015436.1 COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: cob:COB47_1803 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator, AraC family; IMG reference gene:2503956632; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator 415399 10494643 Spico_0359 Sphaerochaeta coccoides DSM 17374 AraC family transcriptional regulator YP_004410970.1 413078 R 760011 CDS YP_004410971.1 330836330 10494644 415407..415952 1 NC_015436.1 KEGG: caa:Caka_1364 redoxin domain protein; SPTR: Redoxin domain protein; IMG reference gene:2503956633; PFAM: AhpC/TSA family; hypothetical protein 415952 10494644 Spico_0360 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410971.1 415407 D 760011 CDS YP_004410972.1 330836331 10494645 complement(416193..417668) 1 NC_015436.1 COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: fbc:FB2170_02130 arylsulfatase A precursor; PFAM: Sulfatase; SPTR: Arylsulfatase A; IMG reference gene:2503956634; PFAM: Sulfatase; sulfatase 417668 10494645 Spico_0361 Sphaerochaeta coccoides DSM 17374 sulfatase YP_004410972.1 416193 R 760011 CDS YP_004410973.1 330836332 10494646 complement(417734..419434) 1 NC_015436.1 COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: gym:GYMC10_2944 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein family 1; IMG reference gene:2503956635; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein 419434 10494646 Spico_0362 Sphaerochaeta coccoides DSM 17374 ABC transporter substrate-binding protein YP_004410973.1 417734 R 760011 CDS YP_004410974.1 330836333 10494647 complement(419501..420412) 1 NC_015436.1 COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: gym:GYMC10_1004 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503956636; carbohydrate ABC transporter membrane protein 2 420412 10494647 Spico_0363 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter membrane protein 2 YP_004410974.1 419501 R 760011 CDS YP_004410975.1 330836334 10494648 complement(420406..421353) 1 NC_015436.1 COGs: COG4209 ABC-type polysaccharide transport system permease component; InterPro IPR000515; KEGG: gym:GYMC10_3277 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; manually curated; IMG reference gene:2503956637; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 421353 10494648 Spico_0364 Sphaerochaeta coccoides DSM 17374 binding-protein-dependent transport system inner membrane protein YP_004410975.1 420406 R 760011 CDS YP_004410976.1 330836335 10494649 421572..422972 1 NC_015436.1 COGs: COG3669 Alpha-L-fucosidase; InterPro IPR000933; KEGG: tde:TDE0480 alpha-L-fucosidase; PFAM: Glycoside hydrolase, family 29; SMART: Glycoside hydrolase, family 29; SPTR: Alpha-L-fucosidase; IMG reference gene:2503956638; PFAM: Alpha-L-fucosidase; glycoside hydrolase 29 (alpha-L-fucosidase) 422972 10494649 Spico_0365 Sphaerochaeta coccoides DSM 17374 glycoside hydrolase 29 (alpha-L-fucosidase) YP_004410976.1 421572 D 760011 CDS YP_004410977.1 330836336 10494650 422969..424363 1 NC_015436.1 COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: caa:Caka_0229 sulfatase; PFAM: Sulfatase; SPTR: uncharacterized protein; IMG reference gene:2503956639; PFAM: Sulfatase; sulfatase 424363 10494650 Spico_0366 Sphaerochaeta coccoides DSM 17374 sulfatase YP_004410977.1 422969 D 760011 CDS YP_004410978.1 330836337 10494652 424759..426600 1 NC_015436.1 KEGG: bfo:BRAFLDRAFT_80969 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956641; hypothetical protein 426600 10494652 Spico_0367 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410978.1 424759 D 760011 CDS YP_004410979.1 330836338 10494653 426646..427089 1 NC_015436.1 COGs: COG2832 conserved hypothetical protein; InterPro IPR007401; KEGG: hch:HCH_04406 hypothetical protein; PFAM: Protein of unknown function DUF454; SPTR: Uncharacterized protein conserved in bacteria; IMG reference gene:2503956642; PFAM: Protein of unknown function (DUF454); hypothetical protein 427089 10494653 Spico_0368 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410979.1 426646 D 760011 CDS YP_004410980.1 330836339 10494654 complement(427136..428479) 1 NC_015436.1 InterPro IPR011701; KEGG: dhd:Dhaf_2526 H+ antiporter protein; PFAM: Major facilitator superfamily MFS-1; SPTR: uncharacterized protein; IMG reference gene:2503956643; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein 428479 10494654 Spico_0369 Sphaerochaeta coccoides DSM 17374 major facilitator superfamily protein YP_004410980.1 427136 R 760011 CDS YP_004410981.1 330836340 10494655 428701..428970 1 NC_015436.1 InterPro IPR006121; KEGG: mmh:Mmah_1006 heavy metal translocating P-type ATPase; PFAM: Heavy metal transport/detoxification protein; SPTR: Heavy metal transport/detoxification protein; IMG reference gene:2503956644; PFAM: Heavy-metal-associated domain; heavy metal transport/detoxification protein 428970 10494655 Spico_0370 Sphaerochaeta coccoides DSM 17374 heavy metal transport/detoxification protein YP_004410981.1 428701 D 760011 CDS YP_004410982.1 330836341 10494656 429023..431338 1 NC_015436.1 COGs: COG2217 Cation transport ATPase; InterProIPR006121:IPR008250:IPR005834:IPR006403:IPR 006416:IPR001757; KEGG: brm:Bmur_1532 heavy metal translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; PRIAM: Copper-exporting ATPase; SPTR: Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; IMG reference gene:2503956645; PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase 431338 10494656 Spico_0371 Sphaerochaeta coccoides DSM 17374 heavy metal translocating P-type ATPase YP_004410982.1 429023 D 760011 CDS YP_004410983.1 330836342 10494657 complement(431340..432644) 1 NC_015436.1 COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR013027; KEGG: amt:Amet_0679 oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: Glutamate synthase (NADPH); SPTR: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; IMG reference gene:2503956646; PFAM: Pyridine nucleotide-disulphide oxidoreductase; glutamate synthase (NADPH) 432644 10494657 Spico_0372 Sphaerochaeta coccoides DSM 17374 glutamate synthase (NADPH) YP_004410983.1 431340 R 760011 CDS YP_004410984.1 330836343 10494658 432906..433472 1 NC_015436.1 COGs: COG0622 phosphoesterase; InterPro IPR004843:IPR000979; KEGG: csh:Closa_0691 phosphodiesterase, MJ0936 family; PFAM: Metallo-dependent phosphatase; SPTR: uncharacterized protein; TIGRFAM: Phosphodiesterase MJ0936; IMG reference gene:2503956647; PFAM: Calcineurin-like phosphoesterase; TIGRFAM: phosphoesterase, MJ0936 family; phosphodiesterase 433472 10494658 Spico_0373 Sphaerochaeta coccoides DSM 17374 phosphodiesterase YP_004410984.1 432906 D 760011 CDS YP_004410985.1 330836344 10494659 433720..435078 1 NC_015436.1 KEGG: sta:STHERM_c01800 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956648; hypothetical protein 435078 10494659 Spico_0374 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410985.1 433720 D 760011 CDS YP_004410986.1 330836345 10494660 435282..436643 1 NC_015436.1 COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR006097:IPR006096; KEGG: aba:Acid345_0942 glutamate dehydrogenase; PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain; PRIAM: Glutamate dehydrogenase (NADP(+)); SMART: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; SPTR: Glutamate dehydrogenase (NADP); IMG reference gene:2503956649; PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; glutamate dehydrogenase 436643 10494660 Spico_0375 Sphaerochaeta coccoides DSM 17374 glutamate dehydrogenase YP_004410986.1 435282 D 760011 CDS YP_004410987.1 330836346 10494661 436852..438168 1 NC_015436.1 COGs: COG2270 Permease of the major facilitator superfamily; InterPro IPR011701; KEGG: sfu:Sfum_3450 major facilitator transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; IMG reference gene:2503956650; PFAM: Vacuole effluxer Atg22 like; major facilitator superfamily protein 438168 10494661 Spico_0376 Sphaerochaeta coccoides DSM 17374 major facilitator superfamily protein YP_004410987.1 436852 D 760011 CDS YP_004410988.1 330836347 10494663 438680..440152 1 NC_015436.1 KEGG: cti:RALTA_B1578 NAD+-dependent betaine aldehyde dehydrogenase; SPTR: NAD+-dependent betaine aldehyde dehydrogenase; IMG reference gene:2503956652; hypothetical protein 440152 10494663 Spico_0377 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410988.1 438680 D 760011 CDS YP_004410989.1 330836348 10494664 complement(440033..441028) 1 NC_015436.1 COGs: COG0812 UDP-N-acetylmuramate dehydrogenase; HAMAP: UDP-N-acetylenolpyruvoylglucosamine reductase; InterPro IPR003170:IPR006094:IPR011601; KEGG: dap:Dacet_0478 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal; FAD linked oxidase, N-terminal; PRIAM: UDP-N-acetylmuramate dehydrogenase; SPTR: UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; IMG reference gene:2503956653; PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; UDP-N-acetylenolpyruvoylglucosamine reductase 441028 10494664 Spico_0378 Sphaerochaeta coccoides DSM 17374 UDP-N-acetylenolpyruvoylglucosamine reductase YP_004410989.1 440033 R 760011 CDS YP_004410990.1 330836349 10494665 441050..442486 1 NC_015436.1 COGs: COG0215 Cysteinyl-tRNA synthetase; InterPro IPR015803; KEGG: sta:STHERM_c18260 hypothetical protein; PFAM: Cysteinyl-tRNA synthetase, class Ia; PRIAM: Cysteine--tRNA ligase; SPTR: uncharacterized protein; TIGRFAM: Cysteinyl-tRNA synthetase, class Ia; IMG reference gene:2503956654; PFAM: tRNA synthetases class I (C) catalytic domain; TIGRFAM: cysteinyl-tRNA synthetase; cysteinyl-tRNA synthetase 442486 10494665 Spico_0379 Sphaerochaeta coccoides DSM 17374 cysteinyl-tRNA synthetase YP_004410990.1 441050 D 760011 CDS YP_004410991.1 330836350 10494666 442515..443042 1 NC_015436.1 COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: ssm:Spirs_2153 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase sigma-24 factor, ; TIGRFAM: RNA polymerase sigma-70; IMG reference gene:2503956655; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; ECF subfamily RNA polymerase sigma-24 subunit 443042 10494666 Spico_0380 Sphaerochaeta coccoides DSM 17374 ECF subfamily RNA polymerase sigma-24 subunit YP_004410991.1 442515 D 760011 CDS YP_004410992.1 330836351 10494667 443032..443646 1 NC_015436.1 KEGG: ssm:Spirs_2152 transmembrane anti-sigma factor; SPTR: uncharacterized protein; IMG reference gene:2503956656; hypothetical protein 443646 10494667 Spico_0381 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410992.1 443032 D 760011 CDS YP_004410993.1 330836352 10494668 complement(443845..444750) 1 NC_015436.1 COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: pjd:Pjdr2_0473 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503956657; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 2 444750 10494668 Spico_0382 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter membrane protein 2 YP_004410993.1 443845 R 760011 CDS YP_004410994.1 330836353 10494669 complement(444762..445712) 1 NC_015436.1 COGs: COG4209 ABC-type polysaccharide transport system permease component; InterPro IPR000515; KEGG: pjd:Pjdr2_0472 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503956658; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 445712 10494669 Spico_0383 Sphaerochaeta coccoides DSM 17374 binding-protein-dependent transport system inner membrane protein YP_004410994.1 444762 R 760011 CDS YP_004410995.1 330836354 10494670 445975..448254 1 NC_015436.1 InterPro IPR001286; KEGG: amd:AMED_3993 hypothetical protein; PFAM: Glycoside hydrolase, family 59; PRIAM: Galactosylceramidase; SPTR: uncharacterized protein; IMG reference gene:2503956659; PFAM: Glycosyl hydrolase 59; galactosylceramidase 448254 10494670 Spico_0384 Sphaerochaeta coccoides DSM 17374 galactosylceramidase YP_004410995.1 445975 D 760011 CDS YP_004410996.1 330836355 10494671 448291..449820 1 NC_015436.1 COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: pjd:Pjdr2_0474 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein family 1; IMG reference gene:2503956660; PFAM: Domain of unknown function (DUF3502); Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein 449820 10494671 Spico_0385 Sphaerochaeta coccoides DSM 17374 ABC transporter substrate-binding protein YP_004410996.1 448291 D 760011 CDS YP_004410997.1 330836356 10494672 449890..452097 1 NC_015436.1 COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR000005:IPR018060; KEGG: ppy:PPE_03254 AraC-type DNA-binding domain-containing protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: AraC-type DNA-binding domain-containing protein; IMG reference gene:2503956661; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator 452097 10494672 Spico_0386 Sphaerochaeta coccoides DSM 17374 AraC family transcriptional regulator YP_004410997.1 449890 D 760011 CDS YP_004410998.1 330836357 10494673 452284..454938 1 NC_015436.1 COGs: COG0525 Valyl-tRNA synthetase; HAMAP: Valyl-tRNA synthetase; InterPro IPR002303:IPR002300:IPR013155:IPR019499; KEGG: ssm:Spirs_2147 valyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ia; Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding; Valyl-tRNA synthetase, class Ia, tRNA-binding arm; PRIAM: Valine--tRNA ligase; SPTR: Valyl-tRNA synthetase; TIGRFAM: Valyl-tRNA synthetase; IMG reference gene:2503956662; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase; valyl-tRNA synthetase 454938 10494673 Spico_0387 Sphaerochaeta coccoides DSM 17374 valyl-tRNA synthetase YP_004410998.1 452284 D 760011 CDS YP_004410999.1 330836358 10494674 complement(455035..455214) 1 NC_015436.1 KEGG: pnu:Pnuc_1747 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956663; hypothetical protein 455214 10494674 Spico_0388 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004410999.1 455035 R 760011 CDS YP_004411000.1 330836359 10494675 complement(455343..456689) 1 NC_015436.1 COGs: COG0826 Collagenase and related protease; InterPro IPR001539; KEGG: sta:STHERM_c16410 hypothetical protein; PFAM: Peptidase U32; SPTR: uncharacterized protein; IMG reference gene:2503956664; PFAM: Peptidase U32; peptidase U32 456689 10494675 Spico_0389 Sphaerochaeta coccoides DSM 17374 peptidase U32 YP_004411000.1 455343 R 760011 CDS YP_004411001.1 330836360 10494676 complement(456686..459337) 1 NC_015436.1 COGs: COG0466 ATP-dependent Lon protease; InterProIPR003111:IPR003959:IPR008269:IPR004815:IPR 003593; KEGG: ssm:Spirs_2144 ATP-dependent protease La; PFAM: Peptidase S16, Lon C-terminal; ATPase, AAA-type, core; Peptidase S16, lon N-terminal; PRIAM: Endopeptidase La; SMART: Peptidase S16, lon N-terminal; ATPase, AAA+ type, core; SPTR: ATP-dependent protease La; TIGRFAM: Peptidase S16, ATP-dependent protease La; IMG reference gene:2503956665; PFAM: ATP-dependent protease La (LON) domain; ATPase associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La; ATP dependent PIM1 peptidase 459337 10494676 Spico_0390 Sphaerochaeta coccoides DSM 17374 ATP dependent PIM1 peptidase YP_004411001.1 456686 R 760011 CDS YP_004411002.1 330836361 10494677 complement(459532..460233) 1 NC_015436.1 COGs: COG1738 conserved hypothetical protein; InterPro IPR003744; KEGG: mma:MM_1800 transporter; PFAM: Protein of unknown function DUF165; SPTR: Transporter; TIGRFAM: Protein of unknown function DUF165; IMG reference gene:2503956666; PFAM: Uncharacterized ACR, YhhQ family COG1738; TIGRFAM: conserved hypothetical integral membrane protein; hypothetical protein 460233 10494677 Spico_0391 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411002.1 459532 R 760011 CDS YP_004411003.1 330836362 10494678 complement(460408..461784) 1 NC_015436.1 InterPro IPR010828; KEGG: amt:Amet_1520 hypothetical protein; PFAM: Alcohol acetyltransferase; SPTR: uncharacterized protein; IMG reference gene:2503956667; PFAM: Alcohol acetyltransferase; alcohol acetyltransferase 461784 10494678 Spico_0392 Sphaerochaeta coccoides DSM 17374 alcohol acetyltransferase YP_004411003.1 460408 R 760011 CDS YP_004411004.1 330836363 10494679 complement(461906..463459) 1 NC_015436.1 COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: amt:Amet_1519 integral membrane sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Integral membrane sensor signal transduction histidine kinase; IMG reference gene:2503956668; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase 463459 10494679 Spico_0393 Sphaerochaeta coccoides DSM 17374 integral membrane sensor signal transduction histidine kinase YP_004411004.1 461906 R 760011 CDS YP_004411005.1 330836364 10494680 complement(463456..464130) 1 NC_015436.1 COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: amt:Amet_1518 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SPTR: Two component transcriptional regulator, winged helix family; IMG reference gene:2503956669; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator 464130 10494680 Spico_0394 Sphaerochaeta coccoides DSM 17374 winged helix family two component transcriptional regulator YP_004411005.1 463456 R 760011 CDS YP_004411006.1 330836365 10494681 complement(464273..465760) 1 NC_015436.1 KEGG: mxa:MXAN_4735 hypothetical protein; SPTR: membrane protein; manually curated; IMG reference gene:2503956670; hypothetical protein 465760 10494681 Spico_0395 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411006.1 464273 R 760011 CDS YP_004411007.1 330836366 10494682 465872..466675 1 NC_015436.1 COGs: COG1381 Recombinational DNA repair protein (RecF pathway); InterPro IPR003717; KEGG: ssm:Spirs_2143 DNA repair protein RecO; PFAM: Recombination protein O, RecO; SPTR: uncharacterized protein; TIGRFAM: Recombination protein O, RecO; IMG reference gene:2503956671; PFAM: Recombination protein O C terminal; Recombination protein O N terminal; TIGRFAM: DNA repair protein RecO; DNA repair protein RecO 466675 10494682 Spico_0396 Sphaerochaeta coccoides DSM 17374 DNA repair protein RecO YP_004411007.1 465872 D 760011 CDS YP_004411008.1 330836367 10494683 466702..468828 1 NC_015436.1 COGs: COG0608 Single-stranded DNA-specific exonuclease; InterPro IPR001667:IPR003156:IPR004610; KEGG: ssm:Spirs_2141 single-stranded-DNA-specific exonuclease RecJ; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; SPTR: Single-stranded-DNA-specific exonuclease; TIGRFAM: Bacterial RecJ exonuclease; IMG reference gene:2503956672; PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; single-stranded-DNA-specific exonuclease RecJ 468828 10494683 Spico_0397 Sphaerochaeta coccoides DSM 17374 single-stranded-DNA-specific exonuclease RecJ YP_004411008.1 466702 D 760011 CDS YP_004411009.1 330836368 10494684 468888..469106 1 NC_015436.1 HAMAP: Ribosomal protein S21; InterPro IPR001911; KEGG: ssm:Spirs_2139 ribosomal protein S21; PFAM: Ribosomal protein S21; SPTR: 30S ribosomal protein S21; TIGRFAM: Ribosomal protein S21; IMG reference gene:2503956673; PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21; 30S ribosomal protein S21 469106 10494684 Spico_0398 Sphaerochaeta coccoides DSM 17374 30S ribosomal protein S21 YP_004411009.1 468888 D 760011 CDS YP_004411010.1 330836369 10494685 complement(469358..469822) 1 NC_015436.1 InterPro IPR015067; KEGG: amt:Amet_1218 hypothetical protein; PFAM: Protein of unknown function DUF1893; SPTR: uncharacterized protein; IMG reference gene:2503956674; PFAM: Domain of unknown function (DUF1893); hypothetical protein 469822 10494685 Spico_0399 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411010.1 469358 R 760011 CDS YP_004411011.1 330836370 10494686 complement(469819..470607) 1 NC_015436.1 COGs: COG1641 conserved hypothetical protein; InterPro IPR002822; KEGG: mpi:Mpet_1113 hypothetical protein; PFAM: Uncharacterised protein family UPF0272; SPTR: UPF0272 protein CUS_2000; IMG reference gene:2503956675; PFAM: Protein of unknown function DUF111; hypothetical protein 470607 10494686 Spico_0400 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411011.1 469819 R 760011 CDS YP_004411012.1 330836371 10494687 470841..471725 1 NC_015436.1 COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140; KEGG: ssm:Spirs_2138 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; PRIAM: Phosphoglycerate dehydrogenase; SPTR: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; IMG reference gene:2503956676; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; Phosphoglycerate dehydrogenase 471725 10494687 Spico_0401 Sphaerochaeta coccoides DSM 17374 Phosphoglycerate dehydrogenase YP_004411012.1 470841 D 760011 CDS YP_004411013.1 330836372 10494688 471709..472812 1 NC_015436.1 COGs: COG1932 Phosphoserine aminotransferase; HAMAP: Phosphoserine aminotransferase; InterPro IPR022278:IPR000192; KEGG: ssm:Spirs_2137 phosphoserine aminotransferase; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Phosphoserine transaminase; SPTR: Phosphoserine aminotransferase; IMG reference gene:2503956677; PFAM: Aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase; phosphoserine aminotransferase apoenzyme 472812 10494688 Spico_0402 Sphaerochaeta coccoides DSM 17374 phosphoserine aminotransferase apoenzyme YP_004411013.1 471709 D 760011 CDS YP_004411014.1 330836373 10494689 472824..473285 1 NC_015436.1 COGs: COG1522 Transcriptional regulators; InterPro IPR019888; KEGG: ssm:Spirs_2136 transcriptional regulator, AsnC family; SMART: Transcription regulator AsnC-type; SPTR: HTH-type transcriptional regulator; IMG reference gene:2503956678; AsnC family transcriptional regulator 473285 10494689 Spico_0403 Sphaerochaeta coccoides DSM 17374 AsnC family transcriptional regulator YP_004411014.1 472824 D 760011 CDS YP_004411015.1 330836374 10494690 473461..474633 1 NC_015436.1 KEGG: ssm:Spirs_2368 acyltransferase; SPTR: Phospholipid/glycerol acyltransferase; IMG reference gene:2503956679; PFAM: Acyltransferase; acyltransferase 474633 10494690 Spico_0404 Sphaerochaeta coccoides DSM 17374 acyltransferase YP_004411015.1 473461 D 760011 CDS YP_004411016.1 330836375 10494691 complement(474710..476590) 1 NC_015436.1 COGs: COG0323 DNA mismatch repair enzyme (predicted ATPase); HAMAP: DNA mismatch repair protein, MutL; InterProIPR020667:IPR003594:IPR013507:IPR014790:IPR 014763; KEGG: ssm:Spirs_2361 DNA mismatch repair protein MutL; PFAM: MutL, C-terminal, dimerisation; DNA mismatch repair protein, C-terminal; ATPase-like, ATP-binding domain; SMART: MutL, C-terminal, dimerisation; SPTR: DNA mismatch repair protein MutL; TIGRFAM: DNA mismatch repair protein, N-terminal; IMG reference gene:2503956680; PFAM: MutL C terminal dimerisation domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL; DNA mismatch repair protein mutL 476590 10494691 Spico_0405 Sphaerochaeta coccoides DSM 17374 DNA mismatch repair protein mutL YP_004411016.1 474710 R 760011 CDS YP_004411017.1 330836376 10494692 complement(476890..479652) 1 NC_015436.1 KEGG: nve:NEMVE_v1g200105 hypothetical protein; SPTR: Predicted protein; IMG reference gene:2503956681; hypothetical protein 479652 10494692 Spico_0406 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411017.1 476890 R 760011 CDS YP_004411018.1 330836377 10494693 complement(479710..481053) 1 NC_015436.1 KEGG: ssm:Spirs_2359 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956682; hypothetical protein 481053 10494693 Spico_0407 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411018.1 479710 R 760011 CDS YP_004411019.1 330836378 10494694 complement(481186..482484) 1 NC_015436.1 COGs: COG1078 HD superfamily phosphohydrolase; InterPro IPR003607; KEGG: ssm:Spirs_2352 metal dependent phosphohydrolase; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: uncharacterized protein; IMG reference gene:2503956683; PFAM: HD domain; metal dependent phosphohydrolase 482484 10494694 Spico_0408 Sphaerochaeta coccoides DSM 17374 metal dependent phosphohydrolase YP_004411019.1 481186 R 760011 CDS YP_004411020.1 330836379 10494696 482820..483494 1 NC_015436.1 KEGG: pyo:PY02442 hypothetical protein; SPTR: Zinc finger, C2H2 type, ; IMG reference gene:2503956685; hypothetical protein 483494 10494696 Spico_0409 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411020.1 482820 D 760011 CDS YP_004411021.1 330836380 10494697 483442..484329 1 NC_015436.1 COGs: COG2896 Molybdenum cofactor biosynthesis protein; InterPro IPR007197:IPR006638; KEGG: ate:Athe_0829 molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Molybdenum cofactor biosynthesis protein A; IMG reference gene:2503956686; PFAM: Radical SAM superfamily; radical SAM protein 484329 10494697 Spico_0410 Sphaerochaeta coccoides DSM 17374 radical SAM protein YP_004411021.1 483442 D 760011 CDS YP_004411022.1 330836381 10494698 484313..485320 1 NC_015436.1 COGs: COG2896 Molybdenum cofactor biosynthesis protein; InterPro IPR007197:IPR006638; KEGG: pab:PAB2273 molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Radical SAM domain protein; manually curated; IMG reference gene:2503956687; PFAM: Radical SAM superfamily; radical SAM protein 485320 10494698 Spico_0411 Sphaerochaeta coccoides DSM 17374 radical SAM protein YP_004411022.1 484313 D 760011 CDS YP_004411023.1 330836382 10494699 485333..486103 1 NC_015436.1 KEGG: dda:Dd703_0966 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956688; hypothetical protein 486103 10494699 Spico_0412 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411023.1 485333 D 760011 CDS YP_004411024.1 330836383 10494700 486073..486657 1 NC_015436.1 KEGG: dvi:Dvir_GJ17340 GJ17340 gene product from transcript GJ17340-RA; SPTR: GJ17340; IMG reference gene:2503956689; hypothetical protein 486657 10494700 Spico_0413 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411024.1 486073 D 760011 CDS YP_004411025.1 330836384 10494701 486654..487616 1 NC_015436.1 InterPro IPR013217; KEGG: npu:Npun_R0686 methyltransferase type 12; PFAM: Methyltransferase type 12; SPTR: Methyltransferase domain family; IMG reference gene:2503956690; type 12 methyltransferase 487616 10494701 Spico_0414 Sphaerochaeta coccoides DSM 17374 type 12 methyltransferase YP_004411025.1 486654 D 760011 CDS YP_004411026.1 330836385 10494702 487629..488843 1 NC_015436.1 InterPro IPR011701; KEGG: cbk:CLL_A2467 permease of the major facilitator superfamily; PFAM: Major facilitator superfamily MFS-1; SPTR: Possible MDR-type permease; IMG reference gene:2503956691; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein 488843 10494702 Spico_0415 Sphaerochaeta coccoides DSM 17374 major facilitator superfamily protein YP_004411026.1 487629 D 760011 CDS YP_004411027.1 330836386 10494703 488862..489629 1 NC_015436.1 KEGG: pyo:PY05620 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956692; hypothetical protein 489629 10494703 Spico_0416 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411027.1 488862 D 760011 CDS YP_004411028.1 330836387 10494704 489639..489905 1 NC_015436.1 KEGG: amr:AM1_1921 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956693; hypothetical protein 489905 10494704 Spico_0417 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411028.1 489639 D 760011 CDS YP_004411029.1 330836388 10494705 489906..490640 1 NC_015436.1 InterPro IPR003675; KEGG: llk:LLKF_0092 CAAX amino terminal protease; PFAM: Abortive infection protein; SPTR: CAAX amino terminal protease; IMG reference gene:2503956694; PFAM: CAAX amino terminal protease; abortive infection protein 490640 10494705 Spico_0418 Sphaerochaeta coccoides DSM 17374 abortive infection protein YP_004411029.1 489906 D 760011 CDS YP_004411030.1 330836389 10494706 490810..491742 1 NC_015436.1 COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197; KEGG: vdi:Vdis_1894 radical SAM domain-containing protein; PFAM: Radical SAM; SPTR: heme biosynthesis protein; IMG reference gene:2503956695; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain; radical SAM protein 491742 10494706 Spico_0419 Sphaerochaeta coccoides DSM 17374 radical SAM protein YP_004411030.1 490810 D 760011 CDS YP_004411031.1 330836390 10494707 491744..494383 1 NC_015436.1 COGs: COG0525 Valyl-tRNA synthetase; HAMAP: Valyl-tRNA synthetase; InterPro IPR002303:IPR002300:IPR013155:IPR019499; KEGG: ssm:Spirs_2147 valyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ia; Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding; Valyl-tRNA synthetase, class Ia, tRNA-binding arm; PRIAM: Valine--tRNA ligase; SPTR: Valyl-tRNA synthetase; TIGRFAM: Valyl-tRNA synthetase; IMG reference gene:2503956696; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase; valyl-tRNA synthetase 494383 10494707 Spico_0420 Sphaerochaeta coccoides DSM 17374 valyl-tRNA synthetase YP_004411031.1 491744 D 760011 CDS YP_004411032.1 330836391 10494708 complement(494597..496480) 1 NC_015436.1 COGs: COG5002 Signal transduction histidine kinase; InterPro IPR003660:IPR013767:IPR003661:IPR003594; KEGG: dol:Dole_1931 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; PAS fold; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain; SPTR: Multi-sensor signal transduction histidine kinase; IMG reference gene:2503956697; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: PAS domain S-box; multi-sensor signal transduction histidine kinase 496480 10494708 Spico_0421 Sphaerochaeta coccoides DSM 17374 multi-sensor signal transduction histidine kinase YP_004411032.1 494597 R 760011 CDS YP_004411033.1 330836392 10494709 complement(496477..497232) 1 NC_015436.1 COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: sta:STHERM_c05370 transcriptional regulatory protein; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SPTR: Transcriptional regulatory protein; IMG reference gene:2503956698; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator 497232 10494709 Spico_0422 Sphaerochaeta coccoides DSM 17374 winged helix family two component transcriptional regulator YP_004411033.1 496477 R 760011 CDS YP_004411034.1 330836393 10494711 498161..498910 1 NC_015436.1 COGs: COG0588 Phosphoglycerate mutase 1; HAMAP: Phosphoglycerate mutase 1; InterPro IPR005952:IPR013078; KEGG: sus:Acid_4374 phosphoglycerate mutase; PFAM: Histidine phosphatase superfamily, clade-1; PRIAM: Bisphosphoglycerate mutase; SMART: Histidine phosphatase superfamily, clade-1; SPTR: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; TIGRFAM: Phosphoglycerate mutase 1; IMG reference gene:2503956700; PFAM: Phosphoglycerate mutase; TIGRFAM: phosphoglycerate mutase, BPG-dependent, family 1; phosphoglycerate mutase 498910 10494711 Spico_0424 Sphaerochaeta coccoides DSM 17374 phosphoglycerate mutase YP_004411034.1 498161 D 760011 CDS YP_004411035.1 330836394 10494712 498940..499809 1 NC_015436.1 COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595:IPR001808; KEGG: cth:Cthe_2775 Crp/FNR family transcriptional regulator; PFAM: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; SMART: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; SPTR: Transcriptional regulator, Crp/Fnr family; IMG reference gene:2503956701; PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain; Crp/Fnr family transcriptional regulator 499809 10494712 Spico_0425 Sphaerochaeta coccoides DSM 17374 Crp/Fnr family transcriptional regulator YP_004411035.1 498940 D 760011 CDS YP_004411036.1 330836395 10494713 500105..502192 1 NC_015436.1 COGs: COG3808 Inorganic pyrophosphatase; InterPro IPR004131; KEGG: cth:Cthe_1425 membrane-bound proton-translocating pyrophosphatase; PFAM: Pyrophosphate-energised proton pump; PRIAM: Inorganic diphosphatase; SPTR: Inorganic diphosphatase; IMG reference gene:2503956702; PFAM: Inorganic H+ pyrophosphatase; TIGRFAM: vacuolar-type H(+)-translocating pyrophosphatase; inorganic diphosphatase 502192 10494713 Spico_0426 Sphaerochaeta coccoides DSM 17374 inorganic diphosphatase YP_004411036.1 500105 D 760011 CDS YP_004411037.1 330836396 10494714 complement(502288..502800) 1 NC_015436.1 KEGG: pmg:P9301_08931 urease subunit alpha; SPTR: uncharacterized protein; IMG reference gene:2503956703; hypothetical protein 502800 10494714 Spico_0427 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411037.1 502288 R 760011 CDS YP_004411038.1 330836397 10494715 503057..503287 1 NC_015436.1 HAMAP: Ribosomal protein L28; InterPro IPR001383; KEGG: ssm:Spirs_2771 ribosomal protein L28; PFAM: Ribosomal protein L28; SPTR: 50S ribosomal protein L28; TIGRFAM: Ribosomal protein L28; IMG reference gene:2503956704; PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; 50S ribosomal protein L28 503287 10494715 Spico_0428 Sphaerochaeta coccoides DSM 17374 50S ribosomal protein L28 YP_004411038.1 503057 D 760011 CDS YP_004411039.1 330836398 10494716 503437..505872 1 NC_015436.1 COGs: COG0460 Homoserine dehydrogenase; InterPro IPR001048:IPR002912:IPR005106:IPR001342; KEGG: ssm:Spirs_2770 aspartate kinase; PFAM: Homoserine dehydrogenase, catalytic; Aspartate/homoserine dehydrogenase, NAD-binding; Aspartate/glutamate/uridylate kinase; Amino acid-binding ACT; PRIAM: Aspartate kinase., Homoserine dehydrogenase; SPTR: Bifunctional aspartokinase/homoserine dehydrogenase II; IMG reference gene:2503956705; PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain; ACT domain; Amino acid kinase; TIGRFAM: aspartate kinase; aspartate kinase 505872 10494716 Spico_0429 Sphaerochaeta coccoides DSM 17374 aspartate kinase YP_004411039.1 503437 D 760011 CDS YP_004411040.1 330836399 10494717 505920..507185 1 NC_015436.1 COGs: COG0498 Threonine synthase; InterPro IPR001926:IPR004450; KEGG: fph:Fphi_0311 threonine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; PRIAM: Threonine synthase; SPTR: Threonine synthase; TIGRFAM: Threonine synthase; IMG reference gene:2503956706; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase; threonine synthase 507185 10494717 Spico_0430 Sphaerochaeta coccoides DSM 17374 threonine synthase YP_004411040.1 505920 D 760011 CDS YP_004411041.1 330836400 10494718 complement(507212..508486) 1 NC_015436.1 COGs: COG0153 Galactokinase; InterPro IPR019539:IPR006204; KEGG: ssm:Spirs_2254 galactokinase; PFAM: Galactokinase galactose-binding domain; GHMP kinase; PRIAM: Galactokinase; SPTR: uncharacterized protein; IMG reference gene:2503956707; PFAM: Galactokinase galactose-binding signature; GHMP kinases N terminal domain; galactokinase 508486 10494718 Spico_0431 Sphaerochaeta coccoides DSM 17374 galactokinase YP_004411041.1 507212 R 760011 CDS YP_004411042.1 330836401 10494719 complement(508680..510116) 1 NC_015436.1 COGs: COG0514 Superfamily II DNA helicase; InterPro IPR011545:IPR001650:IPR004589:IPR014001; KEGG: ssm:Spirs_2762 ATP-dependent DNA helicase, RecQ family; PFAM: Helicase, C-terminal; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: ATP-dependent DNA helicase, RecQ family; TIGRFAM: DNA helicase, ATP-dependent, RecQ type; manually curated; IMG reference gene:2503956708; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ 510116 10494719 Spico_0432 Sphaerochaeta coccoides DSM 17374 ATP-dependent DNA helicase RecQ YP_004411042.1 508680 R 760011 CDS YP_004411043.1 330836402 10494720 510311..511228 1 NC_015436.1 COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: mxa:MXAN_3330 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: uncharacterized protein; IMG reference gene:2503956709; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; phospholipid/glycerol acyltransferase 511228 10494720 Spico_0433 Sphaerochaeta coccoides DSM 17374 phospholipid/glycerol acyltransferase YP_004411043.1 510311 D 760011 CDS YP_004411044.1 330836403 10494721 complement(511329..514259) 1 NC_015436.1 InterPro IPR013378; KEGG: geo:Geob_1283 outer membrane adhesin like proteiin; PFAM: Listeria/Bacterioides repeat; SPTR: Outer membrane adhesin like proteiin; TIGRFAM: Listeria/Bacterioides repeat; IMG reference gene:2503956710; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); TIGRFAM: Listeria/Bacterioides repeat; cell wall/surface repeat protein 514259 10494721 Spico_0434 Sphaerochaeta coccoides DSM 17374 cell wall/surface repeat protein YP_004411044.1 511329 R 760011 CDS YP_004411045.1 330836404 10494722 514769..515623 1 NC_015436.1 COGs: COG0226 ABC-type phosphate transport system periplasmic component; InterPro IPR011862; KEGG: ssm:Spirs_1702 phosphate binding protein; SPTR: Phosphate binding protein; TIGRFAM: Phosphate binding protein; IMG reference gene:2503956711; TIGRFAM: phosphate binding protein; phosphate binding protein 515623 10494722 Spico_0435 Sphaerochaeta coccoides DSM 17374 phosphate binding protein YP_004411045.1 514769 D 760011 CDS YP_004411046.1 330836405 10494723 515677..516570 1 NC_015436.1 COGs: COG0573 ABC-type phosphate transport system permease component; InterPro IPR000515:IPR011864; KEGG: ssm:Spirs_1701 phosphate ABC transporter, inner membrane subunit PstC; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Phosphate ABC transporter, inner membrane subunit PstC; TIGRFAM: Phosphate ABC transporter, permease PstC; IMG reference gene:2503956712; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease PstC; phosphate ABC transporter, permease PstA; phosphate ABC transporter substrate-binding protein 516570 10494723 Spico_0436 Sphaerochaeta coccoides DSM 17374 phosphate ABC transporter substrate-binding protein YP_004411046.1 515677 D 760011 CDS YP_004411047.1 330836406 10494724 516573..518150 1 NC_015436.1 COGs: COG0581 ABC-type phosphate transport system permease component; InterPro IPR000515:IPR005672; KEGG: ssm:Spirs_1700 phosphate ABC transporter, inner membrane subunit PstA; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Phosphate ABC transporter, inner membrane subunit PstA; TIGRFAM: Phosphate transport system permease 2; IMG reference gene:2503956713; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease PstA; phosphate ABC transporter permease 518150 10494724 Spico_0437 Sphaerochaeta coccoides DSM 17374 phosphate ABC transporter permease YP_004411047.1 516573 D 760011 CDS YP_004411048.1 330836407 10494725 518147..518944 1 NC_015436.1 COGs: COG1117 ABC-type phosphate transport system ATPase component; InterPro IPR003439:IPR005670:IPR003593; KEGG: cbf:CLI_2585 phosphate transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Phosphate ABC transporter, ATP-binding protein; TIGRFAM: Phosphate transport system permease 1; IMG reference gene:2503956714; PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein; phosphate ABC transporter ATP-binding protein 518944 10494725 Spico_0438 Sphaerochaeta coccoides DSM 17374 phosphate ABC transporter ATP-binding protein YP_004411048.1 518147 D 760011 CDS YP_004411049.1 330836408 10494726 519051..519713 1 NC_015436.1 COGs: COG0704 Phosphate uptake regulator; InterPro IPR008170; KEGG: sta:STHERM_c05380 transcriptional regulatory protein; PFAM: PhoU; SPTR: Transcriptional regulatory protein; IMG reference gene:2503956715; PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU; phosphate uptake regulator PhoU 519713 10494726 Spico_0439 Sphaerochaeta coccoides DSM 17374 phosphate uptake regulator PhoU YP_004411049.1 519051 D 760011 CDS YP_004411050.1 330836409 10494727 519970..520755 1 NC_015436.1 InterPro IPR013216; KEGG: cbt:CLH_2444 methyltransferase; PFAM: Methyltransferase type 11; SPTR: Methyltransferase; IMG reference gene:2503956716; PFAM: Methyltransferase domain; type 11 methyltransferase 520755 10494727 Spico_0440 Sphaerochaeta coccoides DSM 17374 type 11 methyltransferase YP_004411050.1 519970 D 760011 CDS YP_004411051.1 330836410 10494728 520884..522095 1 NC_015436.1 COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR004839; KEGG: ssm:Spirs_2756 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase, class I/classII; PRIAM: Glycine C-acetyltransferase; SPTR: 8-amino-7-oxononanoate synthase; IMG reference gene:2503956717; PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; serine palmitoyltransferase 522095 10494728 Spico_0441 Sphaerochaeta coccoides DSM 17374 serine palmitoyltransferase YP_004411051.1 520884 D 760011 CDS YP_004411052.1 330836411 10494729 complement(522227..524533) 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; IMG reference gene:2503956718; PFAM: Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 524533 10494729 Spico_0442 Sphaerochaeta coccoides DSM 17374 chromosome condensation regulator RCC1 YP_004411052.1 522227 R 760011 CDS YP_004411053.1 330836412 10494730 complement(524727..526286) 1 NC_015436.1 COGs: COG1640 4-alpha-glucanotransferase; InterPro IPR003385; KEGG: ssm:Spirs_4115 4-alpha-glucanotransferase; PFAM: Glycoside hydrolase, family 77; PRIAM: 4-alpha-glucanotransferase; SPTR: 4-alpha-glucanotransferase; TIGRFAM: Glycoside hydrolase, family 77; IMG reference gene:2503956719; PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; 4-alpha-glucanotransferase 526286 10494730 Spico_0443 Sphaerochaeta coccoides DSM 17374 4-alpha-glucanotransferase YP_004411053.1 524727 R 760011 CDS YP_004411054.1 330836413 10494731 complement(526306..527358) 1 NC_015436.1 COGs: COG1609 Transcriptional regulators; InterPro IPR001761:IPR000843; KEGG: ssm:Spirs_0925 transcriptional regulator, LacI family; PFAM: Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI; SPTR: Alanine racemase; IMG reference gene:2503956720; PFAM: Bacterial regulatory proteins, lacI family; family; LacI family transcriptional regulator 527358 10494731 Spico_0444 Sphaerochaeta coccoides DSM 17374 LacI family transcriptional regulator YP_004411054.1 526306 R 760011 CDS YP_004411055.1 330836414 10494732 complement(527355..528188) 1 NC_015436.1 COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: ccb:Clocel_0515 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503956721; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 2 528188 10494732 Spico_0445 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter membrane protein 2 YP_004411055.1 527355 R 760011 CDS YP_004411056.1 330836415 10494733 complement(528185..529027) 1 NC_015436.1 COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: ccb:Clocel_0514 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503956722; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 1 529027 10494733 Spico_0446 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter membrane protein 1 YP_004411056.1 528185 R 760011 CDS YP_004411057.1 330836416 10494734 complement(529123..530466) 1 NC_015436.1 COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: ccb:Clocel_0513 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein family 1; IMG reference gene:2503956723; PFAM: Bacterial extracellular solute-binding protein; carbohydrate ABC transporter substrate-binding protein 530466 10494734 Spico_0447 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter substrate-binding protein YP_004411057.1 529123 R 760011 CDS YP_004411058.1 330836417 10494735 530805..532313 1 NC_015436.1 COGs: COG0516 IMP dehydrogenase/GMP reductase; InterPro IPR001093:IPR000644; KEGG: afn:Acfer_1275 IMP dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; Cystathionine beta-synthase, core; PRIAM: IMP dehydrogenase; SPTR: uncharacterized protein; IMG reference gene:2503956724; PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase; IMP dehydrogenase 532313 10494735 Spico_0448 Sphaerochaeta coccoides DSM 17374 IMP dehydrogenase YP_004411058.1 530805 D 760011 CDS YP_004411059.1 330836418 10494737 532778..533485 1 NC_015436.1 COGs: COG0325 enzyme with a TIM-barrel fold; InterPro IPR001608:IPR011078; KEGG: ssm:Spirs_2472 alanine racemase domain protein; PFAM: Alanine racemase, N-terminal; SPTR: uncharacterized protein; TIGRFAM: pyridoxal phosphate-dependent enzyme, YBL036C type; IMG reference gene:2503956726; PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family; hypothetical protein 533485 10494737 Spico_0449 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411059.1 532778 D 760011 CDS YP_004411060.1 330836419 10494738 533482..533826 1 NC_015436.1 KEGG: ssm:Spirs_2471 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956727; hypothetical protein 533826 10494738 Spico_0450 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411060.1 533482 D 760011 CDS YP_004411061.1 330836420 10494739 533829..534818 1 NC_015436.1 COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145:IPR006225; KEGG: tpd:Teth39_1349 RluA family pseudouridine synthase; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RluC/RluD; IMG reference gene:2503956728; PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; pseudouridine synthase 534818 10494739 Spico_0451 Sphaerochaeta coccoides DSM 17374 pseudouridine synthase YP_004411061.1 533829 D 760011 CDS YP_004411062.1 330836421 10494740 complement(534801..535385) 1 NC_015436.1 COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001279; KEGG: ssm:Spirs_2469 hypothetical protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; SPTR: Predicted beta lactamase like protein; IMG reference gene:2503956729; PFAM: Metallo-beta-lactamase superfamily; beta-lactamase domain-containing protein 535385 10494740 Spico_0452 Sphaerochaeta coccoides DSM 17374 beta-lactamase domain-containing protein YP_004411062.1 534801 R 760011 CDS YP_004411063.1 330836422 10494741 complement(535382..535960) 1 NC_015436.1 InterPro IPR001646; KEGG: ssm:Spirs_2468 pentapeptide repeat protein; PFAM: Pentapeptide repeat; SPTR: Predicted pentapeptide protein; IMG reference gene:2503956730; pentapeptide repeat-containing protein 535960 10494741 Spico_0453 Sphaerochaeta coccoides DSM 17374 pentapeptide repeat-containing protein YP_004411063.1 535382 R 760011 CDS YP_004411064.1 330836423 10494742 536050..537054 1 NC_015436.1 COGs: COG1162 GTPase; HAMAP: Ribosome biogenesis GTPase RsgA, InterPro IPR004881; KEGG: sta:STHERM_c17030 GTPase YjeQ; PFAM: Ribosome biogenesis GTPase RsgA, SPTR: GTPase YjeQ; TIGRFAM: Ribosome biogenesis GTPase RsgA, IMG reference gene:2503956731; PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A; ribosome biogenesis GTPase RsgA 537054 10494742 Spico_0454 Sphaerochaeta coccoides DSM 17374 ribosome biogenesis GTPase RsgA YP_004411064.1 536050 D 760011 CDS YP_004411065.1 330836424 10494743 537035..539386 1 NC_015436.1 COGs: COG1193 Mismatch repair ATPase (MutS family); InterPro IPR000432:IPR002625:IPR007696; KEGG: ssm:Spirs_2465 MutS2 family protein; PFAM: DNA mismatch repair protein MutS, C-terminal; Smr protein/MutS2 C-terminal; SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; Smr protein/MutS2 C-terminal; SPTR: MutS2 protein; IMG reference gene:2503956732; PFAM: MutS domain V; Smr domain; TIGRFAM: MutS2 family protein; DNA mismatch repair protein MutS domain-containing protein 539386 10494743 Spico_0455 Sphaerochaeta coccoides DSM 17374 DNA mismatch repair protein MutS domain-containing protein YP_004411065.1 537035 D 760011 CDS YP_004411066.1 330836425 10494744 539621..540301 1 NC_015436.1 COGs: COG3819 membrane protein; InterPro IPR010374; KEGG: cpe:CPE1427 hypothetical protein; PFAM: Protein of unknown function DUF969; SPTR: uncharacterized protein; IMG reference gene:2503956733; PFAM: Protein of unknown function (DUF969); hypothetical protein 540301 10494744 Spico_0456 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411066.1 539621 D 760011 CDS YP_004411067.1 330836426 10494745 540305..541219 1 NC_015436.1 COGs: COG3817 membrane protein; InterPro IPR009323; KEGG: cbt:CLH_1447 permease; PFAM: Protein of unknown function DUF979; SPTR: Permease; IMG reference gene:2503956734; PFAM: Protein of unknown function (DUF979); hypothetical protein 541219 10494745 Spico_0457 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411067.1 540305 D 760011 CDS YP_004411068.1 330836427 10494746 541255..541896 1 NC_015436.1 COGs: COG2039 Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase); HAMAP: Peptidase C15, pyroglutamyl peptidase I; InterPro IPR000816; KEGG: cpe:CPE1425 pyrrolidone-carboxylate peptidase; PFAM: Peptidase C15, pyroglutamyl peptidase I; PRIAM: Pyroglutamyl-peptidase I; SPTR: Pyrrolidone-carboxylate peptidase; TIGRFAM: Peptidase C15, pyroglutamyl peptidase I; IMG reference gene:2503956735; PFAM: Pyroglutamyl peptidase; TIGRFAM: pyroglutamyl-peptidase I; pyroglutamyl-peptidase I 541896 10494746 Spico_0458 Sphaerochaeta coccoides DSM 17374 pyroglutamyl-peptidase I YP_004411068.1 541255 D 760011 CDS YP_004411069.1 330836428 10494747 541898..542326 1 NC_015436.1 InterPro IPR009288; KEGG: cpe:CPE1424 hypothetical protein; PFAM: AIG2-like; SPTR: uncharacterized protein CPE1424; IMG reference gene:2503956736; PFAM: AIG2-like family; AIG2 family protein 542326 10494747 Spico_0459 Sphaerochaeta coccoides DSM 17374 AIG2 family protein YP_004411069.1 541898 D 760011 CDS YP_004411070.1 330836429 10494748 542475..543260 1 NC_015436.1 COGs: COG2820 Uridine phosphorylase; InterPro IPR000845:IPR010058; KEGG: spa:M6_Spy1599 uridine phosphorylase; PFAM: Nucleoside phosphorylase domain; PRIAM: Uridine phosphorylase; SPTR: uncharacterized protein; TIGRFAM: Uridine phosphorylase; IMG reference gene:2503956737; PFAM: Phosphorylase superfamily; TIGRFAM: uridine phosphorylase; uridine phosphorylase 543260 10494748 Spico_0460 Sphaerochaeta coccoides DSM 17374 uridine phosphorylase YP_004411070.1 542475 D 760011 CDS YP_004411071.1 330836430 10494749 complement(543278..543643) 1 NC_015436.1 KEGG: nvi:100118784 similar to ENSANGP00000010411; SPTR: Two-component system sensor histidine kinase/response regulator hybrid; IMG reference gene:2503956738; hypothetical protein 543643 10494749 Spico_0461 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411071.1 543278 R 760011 CDS YP_004411072.1 330836431 10494750 543826..544389 1 NC_015436.1 KEGG: clo:HMPREF0868_0782 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956739; hypothetical protein 544389 10494750 Spico_0462 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411072.1 543826 D 760011 CDS YP_004411073.1 330836432 10494751 544423..544854 1 NC_015436.1 COGs: COG0716 Flavodoxins; InterPro IPR008254:IPR010087; KEGG: emi:Emin_0878 flavodoxin; PFAM: Flavodoxin/nitric oxide synthase; SPTR: uncharacterized protein; TIGRFAM: Flavodoxin, short chain; IMG reference gene:2503956740; PFAM: Flavodoxin; TIGRFAM: flavodoxin, short chain; flavodoxin 544854 10494751 Spico_0463 Sphaerochaeta coccoides DSM 17374 flavodoxin YP_004411073.1 544423 D 760011 CDS YP_004411074.1 330836433 10494752 545070..546122 1 NC_015436.1 COGs: COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis; HAMAP: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; InterPro IPR004588; KEGG: sta:STHERM_c12020 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; SPTR: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; IMG reference gene:2503956741; PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 546122 10494752 Spico_0464 Sphaerochaeta coccoides DSM 17374 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_004411074.1 545070 D 760011 CDS YP_004411075.1 330836434 10494753 546125..548962 1 NC_015436.1 COGs: COG0178 Excinuclease ATPase subunit; HAMAP: Excinuclease ABC, A subunit; InterPro IPR004602:IPR003439; KEGG: ssm:Spirs_2452 excinuclease ABC, A subunit; PFAM: ABC transporter-like; SPTR: Excinuclease ABC, subunit A; TIGRFAM: Excinuclease ABC, A subunit; IMG reference gene:2503956742; PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit; excinuclease ABC subunit A 548962 10494753 Spico_0465 Sphaerochaeta coccoides DSM 17374 excinuclease ABC subunit A YP_004411075.1 546125 D 760011 CDS YP_004411076.1 330836435 10494754 548959..552207 1 NC_015436.1 KEGG: ssm:Spirs_2451 organic solvent tolerance protein OstA; SPTR: uncharacterized protein; IMG reference gene:2503956743; hypothetical protein 552207 10494754 Spico_0466 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411076.1 548959 D 760011 CDS YP_004411077.1 330836436 10494755 552215..553237 1 NC_015436.1 COGs: COG1702 Phosphate starvation-inducible protein PhoH predicted ATPase; InterPro IPR003714; KEGG: ssm:Spirs_2450 PhoH family protein; PFAM: PhoH-like protein; SPTR: PhoH-like protein; IMG reference gene:2503956744; PFAM: PhoH-like protein; PhoH family protein 553237 10494755 Spico_0467 Sphaerochaeta coccoides DSM 17374 PhoH family protein YP_004411077.1 552215 D 760011 CDS YP_004411078.1 330836437 10494756 553234..555507 1 NC_015436.1 COGs: COG1480 membrane-associated HD superfamily hydrolase; InterPro IPR006674:IPR006675:IPR003607; KEGG: ssm:Spirs_2449 7TM receptor with intracellular metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: HD domain protein; TIGRFAM: Uncharacterised protein family HDIG; IMG reference gene:2503956745; PFAM: 7TM-HD extracellular; HD domain; 7TM receptor with intracellular HD hydrolase; TIGRFAM: uncharacterized domain HDIG; metal dependent phosphohydrolase 555507 10494756 Spico_0468 Sphaerochaeta coccoides DSM 17374 metal dependent phosphohydrolase YP_004411078.1 553234 D 760011 CDS YP_004411079.1 330836438 10494757 555504..555965 1 NC_015436.1 COGs: COG0319 metal-dependent hydrolase; HAMAP: Uncharacterised protein family UPF0054, metalloprotease YbeY, predicted; InterPro IPR002036; KEGG: tde:TDE1242 metalloprotease; PFAM: Uncharacterised protein family UPF0054, metalloprotease YbeY, predicted; SPTR: metalloprotease TDE_1242; TIGRFAM: Uncharacterised protein family UPF0054, metalloprotease YbeY, predicted; IMG reference gene:2503956746; PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family; metalloprotease ybeY 555965 10494757 Spico_0469 Sphaerochaeta coccoides DSM 17374 metalloprotease ybeY YP_004411079.1 555504 D 760011 CDS YP_004411080.1 330836439 10494758 555969..556751 1 NC_015436.1 COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR000644:IPR005170; KEGG: ssm:Spirs_2447 transporter-associated region; PFAM: Cystathionine beta-synthase, core; Transporter-associated domain; SPTR: Hemolysin C; IMG reference gene:2503956747; PFAM: CBS domain; Transporter associated domain; hypothetical protein 556751 10494758 Spico_0470 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411080.1 555969 D 760011 CDS YP_004411081.1 330836440 10494759 556825..557832 1 NC_015436.1 COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterPro IPR020828:IPR020829:IPR006424; KEGG: bhr:BH0057 glyceraldehyde 3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; SPTR: Glyceraldehyde 3-phosphate dehydrogenase; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; IMG reference gene:2503956748; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; glyceraldehyde-3-phosphate dehydrogenase 557832 10494759 Spico_0471 Sphaerochaeta coccoides DSM 17374 glyceraldehyde-3-phosphate dehydrogenase YP_004411081.1 556825 D 760011 CDS YP_004411082.1 330836441 10494760 557903..559087 1 NC_015436.1 COGs: COG0126 3-phosphoglycerate kinase; HAMAP: Phosphoglycerate kinase; InterPro IPR001576; KEGG: ssm:Spirs_2444 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; PRIAM: Phosphoglycerate kinase; SPTR: Phosphoglycerate kinase; IMG reference gene:2503956749; PFAM: Phosphoglycerate kinase; phosphoglycerate kinase 559087 10494760 Spico_0472 Sphaerochaeta coccoides DSM 17374 phosphoglycerate kinase YP_004411082.1 557903 D 760011 CDS YP_004411083.1 330836442 10494761 559087..559845 1 NC_015436.1 COGs: COG0149 Triosephosphate isomerase; InterPro IPR000652; KEGG: sta:STHERM_c09810 triosephosphate isomerase; PFAM: Triosephosphate isomerase; PRIAM: Triose-phosphate isomerase; SPTR: Triosephosphate isomerase; TIGRFAM: Triosephosphate isomerase; IMG reference gene:2503956750; PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; triosephosphate isomerase 559845 10494761 Spico_0473 Sphaerochaeta coccoides DSM 17374 triosephosphate isomerase YP_004411083.1 559087 D 760011 CDS YP_004411084.1 330836443 10494762 559860..560213 1 NC_015436.1 InterPro IPR004692; KEGG: tde:TDE1238 preprotein translocase subunit SecG; PFAM: Preprotein translocase SecG subunit; SPTR: Preprotein translocase subunit SecG; TIGRFAM: Preprotein translocase SecG subunit; IMG reference gene:2503956751; PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit; preprotein translocase subunit SecG 560213 10494762 Spico_0474 Sphaerochaeta coccoides DSM 17374 preprotein translocase subunit SecG YP_004411084.1 559860 D 760011 CDS YP_004411085.1 330836444 10494763 560234..560422 1 NC_015436.1 KEGG: bfo:BRAFLDRAFT_98883 hypothetical protein; manually curated; IMG reference gene:2503956752; hypothetical protein 560422 10494763 Spico_0475 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411085.1 560234 D 760011 CDS YP_004411086.1 330836445 10494764 560377..560847 1 NC_015436.1 KEGG: ssm:Spirs_2441 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956753; hypothetical protein 560847 10494764 Spico_0476 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411086.1 560377 D 760011 CDS YP_004411087.1 330836446 10494765 560898..561962 1 NC_015436.1 InterPro IPR015391:IPR000297; KEGG: ssm:Spirs_2440 PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SurA N-terminal; SPTR: Basic membrane protein; IMG reference gene:2503956754; PFAM: SurA N-terminal domain; PPIC-type PPIASE domain; PpiC-type peptidyl-prolyl cis-trans isomerase 561962 10494765 Spico_0477 Sphaerochaeta coccoides DSM 17374 PpiC-type peptidyl-prolyl cis-trans isomerase YP_004411087.1 560898 D 760011 CDS YP_004411088.1 330836447 10494766 562068..562484 1 NC_015436.1 COGs: COG0781 Transcription termination factor; InterPro IPR006027; KEGG: tde:TDE1657 transcription antitermination protein NusB; PFAM: NusB/RsmB/TIM44; SPTR: N utilization substance protein B homolog; IMG reference gene:2503956755; PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB; NusB antitermination factor 562484 10494766 Spico_0478 Sphaerochaeta coccoides DSM 17374 NusB antitermination factor YP_004411088.1 562068 D 760011 CDS YP_004411089.1 330836448 10494767 562518..563279 1 NC_015436.1 COGs: COG0024 Methionine aminopeptidase; InterPro IPR000994:IPR002467; KEGG: ssm:Spirs_2437 methionine aminopeptidase, type I; PFAM: Peptidase M24, structural domain; PRIAM: Methionyl aminopeptidase; SPTR: Methionine aminopeptidase; TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1; IMG reference gene:2503956756; PFAM: Metallopeptidase M24; TIGRFAM: methionine aminopeptidase, type I; methionine aminopeptidase 563279 10494767 Spico_0479 Sphaerochaeta coccoides DSM 17374 methionine aminopeptidase YP_004411089.1 562518 D 760011 CDS YP_004411090.1 330836449 10494768 563298..563915 1 NC_015436.1 COGs: COG2236 phosphoribosyltransferase; KEGG: ssm:Spirs_2435 phosphoribosyl transferase domain protein; SPTR: Phosphoribosyl transferase domain protein; IMG reference gene:2503956757; PFAM: Phosphoribosyl transferase domain; phosphoribosyl transferase domain-containing protein 563915 10494768 Spico_0480 Sphaerochaeta coccoides DSM 17374 phosphoribosyl transferase domain-containing protein YP_004411090.1 563298 D 760011 CDS YP_004411091.1 330836450 10494769 complement(564021..565010) 1 NC_015436.1 KEGG: mxa:MXAN_2109 hyalin repeat-containing protein; SPTR: Hyalin repeat protein; IMG reference gene:2503956758; hypothetical protein 565010 10494769 Spico_0481 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411091.1 564021 R 760011 CDS YP_004411092.1 330836451 10494770 complement(565021..565668) 1 NC_015436.1 KEGG: ssm:Spirs_2430 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956759; hypothetical protein 565668 10494770 Spico_0482 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411092.1 565021 R 760011 CDS YP_004411093.1 330836452 10494771 565831..566724 1 NC_015436.1 COGs: COG0190 5 10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; HAMAP: Tetrahydrofolate dehydrogenase/cyclohydrolase; InterPro IPR000672:IPR020630:IPR020631; KEGG: amu:Amuc_1641 methenyltetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; PRIAM: Methenyltetrahydrofolate cyclohydrolase; SPTR: Bifunctional protein folD; IMG reference gene:2503956760; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; 5,10-methylene-tetrahydrofolate dehydrogenase 566724 10494771 Spico_0483 Sphaerochaeta coccoides DSM 17374 5,10-methylene-tetrahydrofolate dehydrogenase YP_004411093.1 565831 D 760011 CDS YP_004411094.1 330836453 10494772 566721..568052 1 NC_015436.1 COGs: COG0621 2-methylthioadenine synthetase; InterProIPR013848:IPR007197:IPR005839:IPR006463:IPR 006638; KEGG: ssm:Spirs_2426 tRNA-i(6)A37 thiotransferase enzyme MiaB; PFAM: Methylthiotransferase, N-terminal; Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: uncharacterized protein; TIGRFAM: tRNA-i(6)A37 modification enzyme MiaB; Methylthiotransferase; IMG reference gene:2503956761; PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; radical SAM methylthiotransferase, MiaB/RimO family; tRNA-i(6)A37 thiotransferase enzyme MiaB 568052 10494772 Spico_0484 Sphaerochaeta coccoides DSM 17374 tRNA-i(6)A37 thiotransferase enzyme MiaB YP_004411094.1 566721 D 760011 CDS YP_004411095.1 330836454 10494773 568062..568910 1 NC_015436.1 COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: dtu:Dtur_1771 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Short-chain dehydrogenase/reductase SDR; IMG reference gene:2503956762; PFAM: short chain dehydrogenase; 3-oxoacyl-ACP reductase 568910 10494773 Spico_0485 Sphaerochaeta coccoides DSM 17374 3-oxoacyl-ACP reductase YP_004411095.1 568062 D 760011 CDS YP_004411096.1 330836455 10494774 568939..569700 1 NC_015436.1 COGs: COG0846 NAD-dependent protein deacetylase SIR2 family; HAMAP: NAD-dependent histone deacetylase, silent information regulator Sir2; InterPro IPR003000; KEGG: mbu:Mbur_0627 silent information regulator protein Sir2; PFAM: NAD-dependent histone deacetylase, silent information regulator Sir2; SPTR: Silent information regulator protein Sir2; IMG reference gene:2503956763; PFAM: Sir2 family; NAD-dependent deacetylase 569700 10494774 Spico_0486 Sphaerochaeta coccoides DSM 17374 NAD-dependent deacetylase YP_004411096.1 568939 D 760011 CDS YP_004411097.1 330836456 10494776 570287..570952 1 NC_015436.1 KEGG: vsp:VS_II1427 hypothetical protein; SPTR: Nucleoside recognition domain protein; IMG reference gene:2503956765; PFAM: Nucleoside recognition; hypothetical protein 570952 10494776 Spico_0487 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411097.1 570287 D 760011 CDS YP_004411098.1 330836457 10494777 570967..571461 1 NC_015436.1 KEGG: dda:Dd703_2631 hypothetical protein; SPTR: Nucleoside recognition domain protein; IMG reference gene:2503956766; PFAM: Nucleoside recognition; hypothetical protein 571461 10494777 Spico_0488 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411098.1 570967 D 760011 CDS YP_004411099.1 330836458 10494778 571477..572907 1 NC_015436.1 COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR002933:IPR011650:IPR010168; KEGG: tpe:Tpen_1350 amidohydrolase; PFAM: Peptidase M20, dimerisation; Peptidase M20; SPTR: Amidohydrolase; TIGRFAM: Peptidase M20D, amidohydrolase; IMG reference gene:2503956767; PFAM: Peptidase dimerisation domain; TIGRFAM: amidohydrolase; amidohydrolase 572907 10494778 Spico_0489 Sphaerochaeta coccoides DSM 17374 amidohydrolase YP_004411099.1 571477 D 760011 CDS YP_004411100.1 330836459 10494779 572931..573641 1 NC_015436.1 KEGG: cdl:CDR20291_2752 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956768; hypothetical protein 573641 10494779 Spico_0490 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411100.1 572931 D 760011 CDS YP_004411101.1 330836460 10494780 573651..574340 1 NC_015436.1 KEGG: oih:OB0952 hypothetical protein; SPTR: uncharacterized protein OB0952; IMG reference gene:2503956769; hypothetical protein 574340 10494780 Spico_0491 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411101.1 573651 D 760011 CDS YP_004411102.1 330836461 10494781 complement(574403..575407) 1 NC_015436.1 COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: msv:Mesil_0673 transcriptional regulator, LacI family; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI; SPTR: Transcriptional regulator, LacI family; IMG reference gene:2503956770; PFAM: Bacterial regulatory proteins, lacI family; family; LacI family transcriptional regulator 575407 10494781 Spico_0492 Sphaerochaeta coccoides DSM 17374 LacI family transcriptional regulator YP_004411102.1 574403 R 760011 CDS YP_004411103.1 330836462 10494782 complement(575462..576349) 1 NC_015436.1 COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: gym:GYMC10_4741 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503956771; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 2 576349 10494782 Spico_0493 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter membrane protein 2 YP_004411103.1 575462 R 760011 CDS YP_004411104.1 330836463 10494783 complement(576361..577290) 1 NC_015436.1 COGs: COG4209 ABC-type polysaccharide transport system permease component; InterPro IPR000515; KEGG: gym:GYMC10_4742 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503956772; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 1 577290 10494783 Spico_0494 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter membrane protein 1 YP_004411104.1 576361 R 760011 CDS YP_004411105.1 330836464 10494784 complement(577295..578545) 1 NC_015436.1 COGs: COG1524 Uncharacterized protein of the AP superfamily; InterPro IPR002591; KEGG: bcv:Bcav_2459 type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; SPTR: Type I phosphodiesterase/nucleotide pyrophosphatase; IMG reference gene:2503956773; PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase; type I phosphodiesterase/nucleotide pyrophosphatase 578545 10494784 Spico_0495 Sphaerochaeta coccoides DSM 17374 type I phosphodiesterase/nucleotide pyrophosphatase YP_004411105.1 577295 R 760011 CDS YP_004411106.1 330836465 10494785 complement(578532..579320) 1 NC_015436.1 COGs: COG1387 Histidinol phosphatase and related hydrolase of the PHP family; InterPro IPR004013:IPR003141; KEGG: tko:TK0327 hypothetical protein; PFAM: PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal; SPTR: Phosphohydrolase, PHP family; IMG reference gene:2503956774; PFAM: PHP domain; PHP domain-containing protein 579320 10494785 Spico_0496 Sphaerochaeta coccoides DSM 17374 PHP domain-containing protein YP_004411106.1 578532 R 760011 CDS YP_004411107.1 330836466 10494786 complement(579317..581029) 1 NC_015436.1 COGs: COG0366 Glycosidase; InterPro IPR006047:IPR006589; KEGG: sta:STHERM_c12800 hypothetical protein; PFAM: Glycosyl hydrolase, family 13, catalytic domain; PRIAM: Sucrose phosphorylase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; SPTR: uncharacterized protein; IMG reference gene:2503956775; PFAM: Alpha amylase, catalytic domain; sucrose phosphorylase 581029 10494786 Spico_0497 Sphaerochaeta coccoides DSM 17374 sucrose phosphorylase YP_004411107.1 579317 R 760011 CDS YP_004411108.1 330836467 10494787 complement(581050..582171) 1 NC_015436.1 KEGG: rrs:RoseRS_2835 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956776; PFAM: Protein of unknown function (DUF2961); hypothetical protein 582171 10494787 Spico_0498 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411108.1 581050 R 760011 CDS YP_004411109.1 330836468 10494788 complement(582175..583107) 1 NC_015436.1 COGs: COG2333 hydrolase (metallo-beta-lactamase superfamily); InterPro IPR001279; KEGG: ppd:Ppro_1379 DNA internalization-related competence protein ComEC/Rec2; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; SPTR: DNA internalization-related competence protein ComEC/Rec2; IMG reference gene:2503956777; PFAM: Metallo-beta-lactamase superfamily; beta-lactamase domain-containing protein 583107 10494788 Spico_0499 Sphaerochaeta coccoides DSM 17374 beta-lactamase domain-containing protein YP_004411109.1 582175 R 760011 CDS YP_004411110.1 330836469 10494789 complement(583184..584779) 1 NC_015436.1 COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: gym:GYMC10_0760 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein family 1; IMG reference gene:2503956778; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein 584779 10494789 Spico_0500 Sphaerochaeta coccoides DSM 17374 ABC transporter substrate-binding protein YP_004411110.1 583184 R 760011 CDS YP_004411111.1 330836470 10494790 585070..585804 1 NC_015436.1 COGs: COG1802 Transcriptional regulators; InterPro IPR000524:IPR011711; KEGG: ssm:Spirs_0802 transcriptional regulator, GntR family; PFAM: HTH transcriptional regulator, GntR; GntR, C-terminal; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal; SPTR: Transcriptional regulator, GntR family; IMG reference gene:2503956779; PFAM: Bacterial regulatory proteins, gntR family; FCD domain; GntR family transcriptional regulator 585804 10494790 Spico_0501 Sphaerochaeta coccoides DSM 17374 GntR family transcriptional regulator YP_004411111.1 585070 D 760011 CDS YP_004411112.1 330836471 10494791 586067..588334 1 NC_015436.1 COGs: COG0620 Methionine synthase II (cobalamin-independent); HAMAP: Cobalamin-independent methionine synthase; InterPro IPR006276:IPR013215:IPR002629; KEGG: swo:Swol_0933 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; PFAM: Methionine synthase, vitamin-B12 independent; Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal; PRIAM:5-methyltetrahydropteroyltriglutamate--homocy steineS-methyltransferase; SPTR:5-methyltetrahydropteroyltriglutamate--homocys teinemethyltransferase; TIGRFAM: Cobalamin-independent methionine synthase; IMG reference gene:2503956780; PFAM: Cobalamin-independent synthase, N-terminal domain; Cobalamin-independent synthase, Catalytic domain; TIGRFAM: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; methionine synthase (B12-independent) 588334 10494791 Spico_0502 Sphaerochaeta coccoides DSM 17374 methionine synthase (B12-independent) YP_004411112.1 586067 D 760011 CDS YP_004411113.1 330836472 10494792 588334..589191 1 NC_015436.1 COGs: COG0685 5 10-methylenetetrahydrofolate reductase; InterPro IPR003171:IPR004620; KEGG: swo:Swol_0934 5,10-methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase; PRIAM: Methylenetetrahydrofolate reductase (NAD(P)H); SPTR: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; IMG reference gene:2503956781; PFAM: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase, prokaryotic form; 5,10-methylenetetrahydrofolate reductase 589191 10494792 Spico_0503 Sphaerochaeta coccoides DSM 17374 5,10-methylenetetrahydrofolate reductase YP_004411113.1 588334 D 760011 CDS YP_004411114.1 330836473 10494793 complement(589242..590165) 1 NC_015436.1 COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR005119; KEGG: swo:Swol_0935 LysR-type transcriptional regulator; PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; SPTR: LysR-type transcriptional regulator; IMG reference gene:2503956782; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; LysR family transcriptional regulator 590165 10494793 Spico_0504 Sphaerochaeta coccoides DSM 17374 LysR family transcriptional regulator YP_004411114.1 589242 R 760011 CDS YP_004411115.1 330836474 10494794 complement(590162..590842) 1 NC_015436.1 KEGG: bhy:BHWA1_00761 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956783; hypothetical protein 590842 10494794 Spico_0505 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411115.1 590162 R 760011 CDS YP_004411116.1 330836475 10494795 591090..591347 1 NC_015436.1 InterPro IPR006628; KEGG: ssm:Spirs_1866 PUR-alpha/beta/gamma DNA/RNA-binding protein; SMART: PUR-alpha/beta/gamma, DNA/RNA-binding; SPTR: uncharacterized protein; IMG reference gene:2503956784; PFAM: Protein of unknown function (DUF3276); PUR-alpha/beta/gamma DNA/RNA-binding protein 591347 10494795 Spico_0506 Sphaerochaeta coccoides DSM 17374 PUR-alpha/beta/gamma DNA/RNA-binding protein YP_004411116.1 591090 D 760011 CDS YP_004411117.1 330836476 10494796 complement(591342..591974) 1 NC_015436.1 COGs: COG0164 Ribonuclease HII; InterPro IPR001352; KEGG: alv:Alvin_2058 ribonuclease H; PFAM: Ribonuclease HII/HIII; PRIAM: Ribonuclease H; SPTR: Ribonuclease; IMG reference gene:2503956785; PFAM: Ribonuclease HII; Ribonuclease H 591974 10494796 Spico_0507 Sphaerochaeta coccoides DSM 17374 Ribonuclease H YP_004411117.1 591342 R 760011 CDS YP_004411118.1 330836477 10494797 592090..594936 1 NC_015436.1 COGs: COG1196 Chromosome segregation ATPase; InterPro IPR003395; KEGG: ssm:Spirs_1868 chromosome segregation protein SMC; PFAM: RecF/RecN/SMC; SPTR: Chromosome partition protein SmC, ; IMG reference gene:2503956786; PFAM: RecF/RecN/SMC N terminal domain; SMC domain-containing protein 594936 10494797 Spico_0508 Sphaerochaeta coccoides DSM 17374 SMC domain-containing protein YP_004411118.1 592090 D 760011 CDS YP_004411119.1 330836478 10494798 595024..596358 1 NC_015436.1 COGs: COG0541 Signal recognition particle GTPase; InterProIPR013822:IPR000897:IPR004125:IPR004780:IPR 003593; KEGG: ssm:Spirs_1871 signal recognition particle protein; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; Signal recognition particle, SRP54 subunit, M-domain; SMART: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; ATPase, AAA+ type, core; SPTR: Signal recognition particle protein; TIGRFAM: Signal recognition particle, SRP; IMG reference gene:2503956787; PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein; signal recognition particle subunit FFH/SRP54 (srp54) 596358 10494798 Spico_0509 Sphaerochaeta coccoides DSM 17374 signal recognition particle subunit FFH/SRP54 (srp54) YP_004411119.1 595024 D 760011 CDS YP_004411120.1 330836479 10494799 596398..596664 1 NC_015436.1 COGs: COG0228 Ribosomal protein S16; HAMAP: Ribosomal protein S16; InterPro IPR000307; KEGG: ssm:Spirs_1872 ribosomal protein S16; PFAM: Ribosomal protein S16; SPTR: 30S ribosomal protein S16; TIGRFAM: Ribosomal protein S16; IMG reference gene:2503956788; PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; 30S ribosomal protein S16 596664 10494799 Spico_0510 Sphaerochaeta coccoides DSM 17374 30S ribosomal protein S16 YP_004411120.1 596398 D 760011 CDS YP_004411121.1 330836480 10494800 596683..596916 1 NC_015436.1 COGs: COG1837 RNA-binding protein (contains KH domain); HAMAP: Uncharacterised protein family UPF0109, bacterial; InterPro IPR020627; KEGG: ssm:Spirs_1873 R-binding protein (contains KH domain); SPTR: Nucleic acid binding protein, containing KH domain; IMG reference gene:2503956789; PFAM: KH domain; RNA-binding protein 596916 10494800 Spico_0511 Sphaerochaeta coccoides DSM 17374 RNA-binding protein YP_004411121.1 596683 D 760011 CDS YP_004411122.1 330836481 10494801 596918..597439 1 NC_015436.1 COGs: COG0806 RimM protein required for 16S rRNA processing; HAMAP: 16S rRNA processing protein RimM; InterPro IPR011961:IPR002676:IPR007903; KEGG: sta:STHERM_c10550 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel; SPTR: 16S rRNA processing protein RimM; TIGRFAM: 16S rRNA processing protein RimM; IMG reference gene:2503956790; PFAM: RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM; Ribosome maturation factor rimM 597439 10494801 Spico_0512 Sphaerochaeta coccoides DSM 17374 Ribosome maturation factor rimM YP_004411122.1 596918 D 760011 CDS YP_004411123.1 330836482 10494802 597436..598167 1 NC_015436.1 COGs: COG0336 tRNA-(guanine-N1)-methyltransferase; HAMAP: tRNA (guanine-N1-)-methyltransferase, bacteria; InterPro IPR002649:IPR016009; KEGG: ssm:Spirs_1875 tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; PRIAM: tRNA (guanine-N(1)-)-methyltransferase; SPTR: tRNA (Guanine-N(1)-)-methyltransferase; TIGRFAM: tRNA (guanine-N1-)-methyltransferase, bacteria; IMG reference gene:2503956791; PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; tRNA (Guanine37-N(1)-) methyltransferase 598167 10494802 Spico_0513 Sphaerochaeta coccoides DSM 17374 tRNA (Guanine37-N(1)-) methyltransferase YP_004411123.1 597436 D 760011 CDS YP_004411124.1 330836483 10494803 598172..598540 1 NC_015436.1 COGs: COG0335 Ribosomal protein L19; HAMAP: Ribosomal protein L19; InterPro IPR001857; KEGG: ssm:Spirs_1876 ribosomal protein L19; PFAM: Ribosomal protein L19; SPTR: 50S ribosomal protein L19; TIGRFAM: Ribosomal protein L19; IMG reference gene:2503956792; PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type; 50S ribosomal protein L19 598540 10494803 Spico_0514 Sphaerochaeta coccoides DSM 17374 50S ribosomal protein L19 YP_004411124.1 598172 D 760011 CDS YP_004411125.1 330836484 10494804 598725..599105 1 NC_015436.1 COGs: COG0792 endonuclease distantly related to Holliday junction resolvase; HAMAP: Uncharacterised protein family UPF0102; InterPro IPR003509; KEGG: cyh:Cyan8802_3919 protein of unknown function UPF0102; PFAM: Uncharacterised protein family UPF0102; SPTR: UPF0102 protein Cyan8802_3919; IMG reference gene:2503956793; PFAM: Uncharacterised protein family UPF0102; hypothetical protein 599105 10494804 Spico_0515 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411125.1 598725 D 760011 CDS YP_004411126.1 330836485 10494805 599089..599604 1 NC_015436.1 KEGG: tde:TDE2305 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956794; hypothetical protein 599604 10494805 Spico_0516 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411126.1 599089 D 760011 CDS YP_004411127.1 330836486 10494806 599601..600101 1 NC_015436.1 COGs: COG0669 Phosphopantetheine adenylyltransferase; HAMAP: Coenzyme A biosynthesis protein; InterPro IPR001980:IPR004820:IPR004821; KEGG: ssm:Spirs_1886 pantetheine-phosphate adenylyltransferase; PFAM: Cytidylyltransferase; PRIAM: Pantetheine-phosphate adenylyltransferase; SPTR: Phosphopantetheine adenylyltransferase; TIGRFAM: Coenzyme A biosynthesis protein; Cytidyltransferase-related; IMG reference gene:2503956795; PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain; Phosphopantetheine adenylyltransferase 600101 10494806 Spico_0517 Sphaerochaeta coccoides DSM 17374 Phosphopantetheine adenylyltransferase YP_004411127.1 599601 D 760011 CDS YP_004411128.1 330836487 10494807 600157..600345 1 NC_015436.1 COGs: COG0333 Ribosomal protein L32; HAMAP: Ribosomal protein L32p; InterPro IPR002677; KEGG: ssm:Spirs_1887 ribosomal protein L32; PFAM: Ribosomal protein L32p; SPTR: 50S ribosomal protein L32; TIGRFAM: Ribosomal protein L32p; IMG reference gene:2503956796; PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32; 50S ribosomal protein L32 600345 10494807 Spico_0518 Sphaerochaeta coccoides DSM 17374 50S ribosomal protein L32 YP_004411128.1 600157 D 760011 CDS YP_004411129.1 330836488 10494808 600362..600601 1 NC_015436.1 COGs: COG0236 Acyl carrier protein; HAMAP: Acyl carrier protein (ACP); InterPro IPR003231:IPR006163; KEGG: sta:STHERM_c10660 hypothetical protein; PFAM: Phosphopantetheine-binding; SPTR: uncharacterized protein; TIGRFAM: Acyl carrier protein (ACP); IMG reference gene:2503956797; PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein; acyl carrier protein 600601 10494808 Spico_0519 Sphaerochaeta coccoides DSM 17374 acyl carrier protein YP_004411129.1 600362 D 760011 CDS YP_004411130.1 330836489 10494809 600617..601387 1 NC_015436.1 COGs: COG0571 dsRNA-specific ribonuclease; HAMAP: Ribonuclease III, bacterial; InterPro IPR011907:IPR000999:IPR001159; KEGG: ssm:Spirs_1889 ribonuclease III; PFAM: Ribonuclease III; Double-stranded RNA-binding; PRIAM: Ribonuclease III; SMART: Ribonuclease III; Double-stranded RNA-binding; SPTR: Ribonuclease 3; TIGRFAM: Ribonuclease III, bacterial; IMG reference gene:2503956798; PFAM: RNase3 domain; Double-stranded RNA binding motif; TIGRFAM: ribonuclease III, bacterial; RNAse III 601387 10494809 Spico_0520 Sphaerochaeta coccoides DSM 17374 RNAse III YP_004411130.1 600617 D 760011 CDS YP_004411131.1 330836490 10494810 complement(601501..602928) 1 NC_015436.1 COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR002646:IPR006674:IPR006675; KEGG: ssm:Spirs_1890 polynucleotide adenylyltransferase/metal dependent phosphohydrolase; PFAM: Poly A polymerase, head domain; Metal-dependent phosphohydrolase, HD subdomain; PRIAM: tRNA cytidylyltransferase; SPTR: tRNA adenylyltransferase; TIGRFAM: Uncharacterised protein family HDIG; IMG reference gene:2503956799; PFAM: HD domain; Poly A polymerase head domain; polynucleotide adenylyltransferase 602928 10494810 Spico_0521 Sphaerochaeta coccoides DSM 17374 polynucleotide adenylyltransferase YP_004411131.1 601501 R 760011 CDS YP_004411132.1 330836491 10494811 603030..606164 1 NC_015436.1 COGs: COG0060 Isoleucyl-tRNA synthetase; HAMAP: Isoleucyl-tRNA synthetase, class Ia; InterPro IPR002301:IPR002300:IPR013155; KEGG: ssm:Spirs_1894 isoleucyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ia; Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding; PRIAM: Isoleucine--tRNA ligase; SPTR: Isoleucyl-tRNA synthetase; TIGRFAM: Isoleucyl-tRNA synthetase, class Ia; IMG reference gene:2503956800; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 606164 10494811 Spico_0522 Sphaerochaeta coccoides DSM 17374 isoleucyl-tRNA synthetase YP_004411132.1 603030 D 760011 CDS YP_004411133.1 330836492 10494812 606168..607103 1 NC_015436.1 KEGG: tbd:Tbd_1366 diguanylate cyclase/phosphodiesterase; SPTR: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S); IMG reference gene:2503956801; hypothetical protein 607103 10494812 Spico_0523 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411133.1 606168 D 760011 CDS YP_004411134.1 330836493 10494813 complement(607117..608334) 1 NC_015436.1 COGs: COG0301 Thiamine biosynthesis ATP pyrophosphatase; HAMAP: Thiamine biosynthesis protein; InterPro IPR003720:IPR004114:IPR020536; KEGG: ssm:Spirs_1899 thiamine biosynthesis/tRNA modification protein ThiI; PFAM: Thiamine biosynthesis protein, C-terminal; THUMP; SMART: THUMP; SPTR: Probable thiamine biosynthesis protein ThiI; TIGRFAM: Thiamine biosynthesis protein; IMG reference gene:2503956802; PFAM: Thiamine biosynthesis protein (ThiI); THUMP domain; TIGRFAM: thiazole biosynthesis/tRNA modification protein ThiI; tRNA sulfurtransferase 608334 10494813 Spico_0524 Sphaerochaeta coccoides DSM 17374 tRNA sulfurtransferase YP_004411134.1 607117 R 760011 CDS YP_004411135.1 330836494 10494814 complement(608334..609596) 1 NC_015436.1 COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR000192; KEGG: sta:STHERM_c15870 cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Cysteine desulfurase; SPTR: Cysteine desulfurase; IMG reference gene:2503956803; PFAM: Aminotransferase class-V; cysteine desulfurase 609596 10494814 Spico_0525 Sphaerochaeta coccoides DSM 17374 cysteine desulfurase YP_004411135.1 608334 R 760011 CDS YP_004411136.1 330836495 10494815 609613..610680 1 NC_015436.1 COGs: COG0337 3-dehydroquinate synthetase; InterPro IPR002658; KEGG: ssm:Spirs_1902 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase AroB; PRIAM: 3-dehydroquinate synthase; SPTR: 3-dehydroquinate synthase; IMG reference gene:2503956804; PFAM: 3-dehydroquinate synthase; 3-dehydroquinate synthase 610680 10494815 Spico_0526 Sphaerochaeta coccoides DSM 17374 3-dehydroquinate synthase YP_004411136.1 609613 D 760011 CDS YP_004411137.1 330836496 10494816 complement(610722..613343) 1 NC_015436.1 COGs: COG1643 HrpA-like helicase; InterPro IPR001650:IPR007502:IPR011709:IPR014001; KEGG: ssm:Spirs_1903 protein of unknown function DUF1605; PFAM: Domain of unknown function DUF1605; Helicase-associated domain; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; Helicase-associated domain; SPTR: uncharacterized protein; IMG reference gene:2503956805; PFAM: Helicase conserved C-terminal domain; Helicase associated domain (HA2); DEAD/DEAH box helicase; Domain of unknown function (DUF1605); TIGRFAM: ATP-dependent helicase HrpA; hypothetical protein 613343 10494816 Spico_0527 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411137.1 610722 R 760011 CDS YP_004411138.1 330836497 10494817 complement(613340..614641) 1 NC_015436.1 COGs: COG0124 Histidyl-tRNA synthetase; HAMAP: Histidyl-tRNA synthetase, class IIa, subgroup; InterPro IPR015807:IPR002314:IPR004154; KEGG: ssm:Spirs_1904 histidyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Anticodon-binding; PRIAM: Histidine--tRNA ligase; SPTR: Histidyl-tRNA synthetase; TIGRFAM: Histidyl-tRNA synthetase, class IIa, subgroup; IMG reference gene:2503956806; PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase; histidyl-tRNA synthetase 614641 10494817 Spico_0528 Sphaerochaeta coccoides DSM 17374 histidyl-tRNA synthetase YP_004411138.1 613340 R 760011 CDS YP_004411139.1 330836498 10494818 614765..616096 1 NC_015436.1 COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR002646:IPR010206; KEGG: ssm:Spirs_1905 poly(A) polymerase; PFAM: Poly A polymerase, head domain; PRIAM: Polynucleotide adenylyltransferase; SPTR: PolyA polymerase; TIGRFAM: Poly(A) polymerase, PcnB; IMG reference gene:2503956807; PFAM: Poly A polymerase head domain; TIGRFAM: poly(A) polymerase; poly(A) polymerase 616096 10494818 Spico_0529 Sphaerochaeta coccoides DSM 17374 poly(A) polymerase YP_004411139.1 614765 D 760011 CDS YP_004411140.1 330836499 10494819 complement(616129..617001) 1 NC_015436.1 KEGG: ssm:Spirs_1907 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956808; hypothetical protein 617001 10494819 Spico_0530 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411140.1 616129 R 760011 CDS YP_004411141.1 330836500 10494820 617123..618439 1 NC_015436.1 COGs: COG4656 NADH:ubiquinone oxidoreductase subunit RnfC; InterPro IPR011538:IPR019554:IPR001450:IPR010208; KEGG: ssm:Spirs_1909 electron transport complex, RnfABCDGE type, C subunit; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; 4Fe-4S binding domain; SPTR: Transporter; TIGRFAM: Electron transport complex, RnfC; manually curated; IMG reference gene:2503956809; PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; RnfABCDGE type electron transport complex subunit C 618439 10494820 Spico_0531 Sphaerochaeta coccoides DSM 17374 RnfABCDGE type electron transport complex subunit C YP_004411141.1 617123 D 760011 CDS YP_004411142.1 330836501 10494821 618441..619805 1 NC_015436.1 COGs: COG4658 NADH:ubiquinone oxidoreductase subunit RnfD; InterPro IPR004338:IPR011303; KEGG: ssm:Spirs_1910 electron transport complex, RnfABCDGE type, D subunit; PFAM: NADH-quinone reductase NQR2/RnfD; SPTR: Electron transport complex, D subunit; TIGRFAM: Electron transport complex, RnfD; IMG reference gene:2503956810; PFAM: NQR2, RnfD, RnfE family; RnfABCDGE type electron transport complex subunit D 619805 10494821 Spico_0532 Sphaerochaeta coccoides DSM 17374 RnfABCDGE type electron transport complex subunit D YP_004411142.1 618441 D 760011 CDS YP_004411143.1 330836502 10494822 619802..620362 1 NC_015436.1 InterPro IPR007329; KEGG: ssm:Spirs_1911 FMN-binding domain protein; PFAM: FMN-binding; SMART: FMN-binding; SPTR: Electron transport complex, rnfabcdGe type, g subunit; IMG reference gene:2503956811; PFAM: FMN-binding domain; FMN-binding domain-containing protein 620362 10494822 Spico_0533 Sphaerochaeta coccoides DSM 17374 FMN-binding domain-containing protein YP_004411143.1 619802 D 760011 CDS YP_004411144.1 330836503 10494823 620362..620997 1 NC_015436.1 COGs: COG4660 NADH:ubiquinone oxidoreductase subunit RnfE; InterPro IPR003667; KEGG: ssm:Spirs_1912 electron transport complex, RnfABCDGE type, E subunit; PFAM: Electron transport complex, Rnf/Nqr; SPTR: Electron transport complex, RnfABCDGE type, E subunit; IMG reference gene:2503956812; PFAM: Rnf-Nqr subunit, membrane protein; RnfA-Nqr electron transport subunit 620997 10494823 Spico_0534 Sphaerochaeta coccoides DSM 17374 RnfA-Nqr electron transport subunit YP_004411144.1 620362 D 760011 CDS YP_004411145.1 330836504 10494824 620994..621584 1 NC_015436.1 COGs: COG4657 NADH:ubiquinone oxidoreductase subunit RnfA; KEGG: ssm:Spirs_1913 electron transport complex, RnfABCDGE type, A subunit; SPTR: Na(+)-translocating NADH-quinone reductase subunit E; IMG reference gene:2503956813; PFAM: Rnf-Nqr subunit, membrane protein; RnfABCDGE type electron transport complex subunit A 621584 10494824 Spico_0535 Sphaerochaeta coccoides DSM 17374 RnfABCDGE type electron transport complex subunit A YP_004411145.1 620994 D 760011 CDS YP_004411146.1 330836505 10494825 621853..623751 1 NC_015436.1 InterPro IPR004300:IPR015179; KEGG: ssm:Spirs_1915 4-alpha-glucanotransferase; PFAM: Glycoside hydrolase, family 57, N-terminal; Alpha-amylase/4-alpha-glucanotransferase, C-terminal; SPTR: 4-alpha-glucanotransferase; IMG reference gene:2503956814; PFAM: Glycosyl hydrolase 57; Domain of unknown function (DUF1926); glycoside hydrolase 57 623751 10494825 Spico_0536 Sphaerochaeta coccoides DSM 17374 glycoside hydrolase 57 YP_004411146.1 621853 D 760011 CDS YP_004411147.1 330836506 10494826 join(623776..623844,623846..624886) 1 NC_015436.1 KEGG: bfa:Bfae_13220 4-alpha-glucanotransferase; SPTR: Peptide chain release factor 2; manually curated; IMG reference gene:2503956815; PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2; peptide chain release factor 2 624886 10494826 Spico_0537 Sphaerochaeta coccoides DSM 17374 peptide chain release factor 2 YP_004411147.1 623776 D 760011 CDS YP_004411148.1 330836507 10494827 624895..626223 1 NC_015436.1 KEGG: mhu:Mhun_2300 PEGA; SPTR: PEGA; IMG reference gene:2503956816; hypothetical protein 626223 10494827 Spico_0538 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411148.1 624895 D 760011 CDS YP_004411149.1 330836508 10494828 626240..627106 1 NC_015436.1 COGs: COG0552 Signal recognition particle GTPase; InterPro IPR013822:IPR000897:IPR004390:IPR003593; KEGG: ssm:Spirs_1921 signal recognition particle-docking protein FtsY; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; SMART: Signal recognition particle, SRP54 subunit, GTPase; ATPase, AAA+ type, core; Signal recognition particle, SRP54 subunit, helical bundle; SPTR: Signal recognition particle-docking protein FtsY; TIGRFAM: Cell division transporter substrate-binding protein FtsY; IMG reference gene:2503956817; PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY; signal recognition particle-docking protein FtsY 627106 10494828 Spico_0539 Sphaerochaeta coccoides DSM 17374 signal recognition particle-docking protein FtsY YP_004411149.1 626240 D 760011 CDS YP_004411150.1 330836509 10494829 627128..628366 1 NC_015436.1 COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: sta:STHERM_c12430 lipoprotein releasing system, permease; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: lipoprotein releasing system, permease; IMG reference gene:2503956818; PFAM: Predicted permease; hypothetical protein 628366 10494829 Spico_0540 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411150.1 627128 D 760011 CDS YP_004411151.1 330836510 10494830 628353..629054 1 NC_015436.1 COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: sta:STHERM_c12420 lipoprotein-releasing system ATP-binding protein LolD; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Lipoprotein-releasing system ATP-binding protein LolD; IMG reference gene:2503956819; PFAM: ABC transporter; phosphonate-transporting ATPase 629054 10494830 Spico_0541 Sphaerochaeta coccoides DSM 17374 phosphonate-transporting ATPase YP_004411151.1 628353 D 760011 CDS YP_004411152.1 330836511 10494831 629051..630238 1 NC_015436.1 COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: ssm:Spirs_1925 protein of unknown function DUF214; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: Lipoprotein releasing system, transmembrane protein, LolC/E family; IMG reference gene:2503956820; PFAM: Predicted permease; hypothetical protein 630238 10494831 Spico_0542 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411152.1 629051 D 760011 CDS YP_004411153.1 330836512 10494832 630311..631237 1 NC_015436.1 COGs: COG1234 Metal-dependent hydrolase of the beta-lactamase superfamily III; HAMAP: Ribonuclease Z; InterPro IPR013471:IPR001279; KEGG: tde:TDE1951 ribonuclease Z; PFAM: Beta-lactamase-like; SPTR: Ribonuclease Z; TIGRFAM: Ribonuclease Z; IMG reference gene:2503956821; PFAM: Metallo-beta-lactamase superfamily; TIGRFAM: ribonuclease Z; RNAse Z 631237 10494832 Spico_0543 Sphaerochaeta coccoides DSM 17374 RNAse Z YP_004411153.1 630311 D 760011 CDS YP_004411154.1 330836513 10494833 complement(631423..632322) 1 NC_015436.1 KEGG: mdi:METDI2989 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956822; hypothetical protein 632322 10494833 Spico_0544 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411154.1 631423 R 760011 CDS YP_004411155.1 330836514 10494834 632413..632919 1 NC_015436.1 InterPro IPR007060; KEGG: pay:PAU_00273 hypothetical protein; PFAM: Septum formation initiator; SPTR: uncharacterized protein; IMG reference gene:2503956823; septum formation initiator 632919 10494834 Spico_0545 Sphaerochaeta coccoides DSM 17374 septum formation initiator YP_004411155.1 632413 D 760011 CDS YP_004411156.1 330836515 10494835 632943..633527 1 NC_015436.1 COGs: COG0009 translation factor (SUA5); InterPro IPR006070; KEGG: ssm:Spirs_1938 SUA5/YciO/YrdC/YwlC family protein; PFAM: Sua5/YciO/YrdC, N-terminal; SPTR: Sua5/YciO/YrdC/YwlC family protein; IMG reference gene:2503956824; PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; SUA5/yciO/yrdC domain-containing protein 633527 10494835 Spico_0546 Sphaerochaeta coccoides DSM 17374 SUA5/yciO/yrdC domain-containing protein YP_004411156.1 632943 D 760011 CDS YP_004411157.1 330836516 10494836 complement(633517..634839) 1 NC_015436.1 InterPro IPR008323; KEGG: ssm:Spirs_1939 hypothetical protein; PFAM: Uncharacterised conserved protein UCP033563; SPTR: uncharacterized protein; IMG reference gene:2503956825; PFAM: Protein of unknown function (DUF1015); hypothetical protein 634839 10494836 Spico_0547 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411157.1 633517 R 760011 CDS YP_004411158.1 330836517 10494837 634891..635580 1 NC_015436.1 COGs: COG1564 Thiamine pyrophosphokinase; InterPro IPR007371:IPR006282; KEGG: ssm:Spirs_1940 thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase, catalytic domain; SPTR: uncharacterized protein; TIGRFAM: Thiamin pyrophosphokinase; IMG reference gene:2503956826; PFAM: Thiamin pyrophosphokinase, vitamin B1 binding domain; Thiamin pyrophosphokinase, catalytic domain; TIGRFAM: thiamine pyrophosphokinase; thiamine pyrophosphokinase 635580 10494837 Spico_0548 Sphaerochaeta coccoides DSM 17374 thiamine pyrophosphokinase YP_004411158.1 634891 D 760011 CDS YP_004411159.1 330836518 10494838 635661..636002 1 NC_015436.1 KEGG: cff:CFF8240_1387 polysaccharide biosynthesis protein; SPTR: Polysaccharide biosynthesis protein; IMG reference gene:2503956827; hypothetical protein 636002 10494838 Spico_0549 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411159.1 635661 D 760011 CDS YP_004411160.1 330836519 10494839 636017..636391 1 NC_015436.1 COGs: COG4401 Chorismate mutase; InterPro IPR008243; KEGG: chy:CHY_0473 chorismate mutase; PFAM: Chorismate mutase, AroH class; SPTR: Chorismate mutase; TIGRFAM: Chorismate mutase, AroH class; IMG reference gene:2503956828; PFAM: Chorismate mutase type I; TIGRFAM: monofunctional chorismate mutase, gram positive type, clade 1; chorismate mutase 636391 10494839 Spico_0550 Sphaerochaeta coccoides DSM 17374 chorismate mutase YP_004411160.1 636017 D 760011 CDS YP_004411161.1 330836520 10494841 complement(636852..637013) 1 NC_015436.1 KEGG: fbl:Fbal_1981 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; SPTR: Transport ATP-binding protein aarD; IMG reference gene:2503956830; hypothetical protein 637013 10494841 Spico_0551 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411161.1 636852 R 760011 CDS YP_004411162.1 330836521 10494842 637193..638275 1 NC_015436.1 COGs: COG0338 Site-specific DNA methylase; InterPro IPR012327; KEGG: lba:Lebu_2246 DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; SPTR: DNA adenine methylase; TIGRFAM: D12 class N6 adenine-specific DNA methyltransferase; IMG reference gene:2503956831; PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam); DNA adenine methylase 638275 10494842 Spico_0552 Sphaerochaeta coccoides DSM 17374 DNA adenine methylase YP_004411162.1 637193 D 760011 CDS YP_004411163.1 330836522 10494843 638272..639129 1 NC_015436.1 InterPro IPR007637; KEGG: eel:EUBELI_01767 type II restriction enzyme; PFAM: Restriction endonuclease, type II, DpmII-like; PRIAM: Type II site-specific deoxyribonuclease; SPTR: Type II site-specific deoxyribonuclease; IMG reference gene:2503956832; PFAM: DpnII restriction endonuclease; type II site-specific deoxyribonuclease 639129 10494843 Spico_0553 Sphaerochaeta coccoides DSM 17374 type II site-specific deoxyribonuclease YP_004411163.1 638272 D 760011 CDS YP_004411164.1 330836523 10494844 639126..639863 1 NC_015436.1 COGs: COG1041 DNA modification methylase; InterPro IPR002941; KEGG: lba:Lebu_2245 RNA methylase; PFAM: DNA methylase N-4/N-6; SPTR: DNA methylase N-4/N-6 domain protein; IMG reference gene:2503956833; PFAM: DNA methylase; DNA methylase N-4/N-6 domain-containing protein 639863 10494844 Spico_0554 Sphaerochaeta coccoides DSM 17374 DNA methylase N-4/N-6 domain-containing protein YP_004411164.1 639126 D 760011 CDS YP_004411165.1 330836524 10494845 640192..640530 1 NC_015436.1 COGs: COG3070 Regulator of competence-specific genes; InterPro IPR007076; KEGG: pru:PRU_2356 TfoX N-terminal domain-containing protein; PFAM: TfoX, N-terminal; SPTR: uncharacterized protein; tmRNA as predicted by Rfam (RF00023), score 166.26; IMG reference gene:2503956834; PFAM: TfoX N-terminal domain; TfoX domain-containing protein 640530 10494845 Spico_R0016 Sphaerochaeta coccoides DSM 17374 TfoX domain-containing protein YP_004411165.1 640192 D 760011 CDS YP_004411166.1 330836525 10494846 complement(641322..642209) 1 NC_015436.1 COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR005119; KEGG: str:Sterm_1975 transcriptional regulator, LysR family; PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; SPTR: uncharacterized protein; IMG reference gene:2503956835; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; LysR family transcriptional regulator 642209 10494846 Spico_0556 Sphaerochaeta coccoides DSM 17374 LysR family transcriptional regulator YP_004411166.1 641322 R 760011 CDS YP_004411167.1 330836526 10494847 642347..643864 1 NC_015436.1 COGs: COG0656 Aldo/keto reductase related to diketogulonate reductase; InterPro IPR023210; KEGG: ssm:Spirs_1777 aldo/keto reductase; PFAM: NADP-dependent oxidoreductase domain; PRIAM: 2,5-didehydrogluconate reductase; SPTR: uncharacterized protein; IMG reference gene:2503956836; PFAM: Aldo/keto reductase; 2,5-didehydrogluconate reductase 643864 10494847 Spico_0557 Sphaerochaeta coccoides DSM 17374 2,5-didehydrogluconate reductase YP_004411167.1 642347 D 760011 CDS YP_004411168.1 330836527 10494848 643878..644615 1 NC_015436.1 KEGG: shi:Shel_18140 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956837; hypothetical protein 644615 10494848 Spico_0558 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411168.1 643878 D 760011 CDS YP_004411169.1 330836528 10494849 644656..645207 1 NC_015436.1 COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451; KEGG: cgr:CAGL0K11066g hypothetical protein; PRIAM: Maltose O-acetyltransferase; SPTR: Maltose O-acetyltransferase; IMG reference gene:2503956838; PFAM: Bacterial transferase hexapeptide (three repeats); maltose O-acetyltransferase 645207 10494849 Spico_0559 Sphaerochaeta coccoides DSM 17374 maltose O-acetyltransferase YP_004411169.1 644656 D 760011 CDS YP_004411170.1 330836529 10494850 645275..645580 1 NC_015436.1 COGs: COG0655 Multimeric flavodoxin WrbA; InterPro IPR005025; KEGG: brm:Bmur_2381 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR: uncharacterized protein; IMG reference gene:2503956839; PFAM: NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 645580 10494850 Spico_0560 Sphaerochaeta coccoides DSM 17374 NADPH-dependent FMN reductase YP_004411170.1 645275 D 760011 CDS YP_004411171.1 330836530 10494851 645781..646410 1 NC_015436.1 InterPro IPR001647; KEGG: cpy:Cphy_1864 TetR family transcriptional regulator; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family; IMG reference gene:2503956840; PFAM: Bacterial regulatory proteins, tetR family; TetR family transcriptional regulator 646410 10494851 Spico_0561 Sphaerochaeta coccoides DSM 17374 TetR family transcriptional regulator YP_004411171.1 645781 D 760011 CDS YP_004411172.1 330836531 10494852 646413..646811 1 NC_015436.1 COGs: COG3976 conserved hypothetical protein; InterPro IPR007329; KEGG: cbe:Cbei_3767 FMN-binding domain-containing protein; PFAM: FMN-binding; SMART: FMN-binding; SPTR: FMN-binding domain protein; IMG reference gene:2503956841; PFAM: FMN-binding domain; FMN-binding domain-containing protein 646811 10494852 Spico_0562 Sphaerochaeta coccoides DSM 17374 FMN-binding domain-containing protein YP_004411172.1 646413 D 760011 CDS YP_004411173.1 330836532 10494853 646811..647353 1 NC_015436.1 KEGG: str:Sterm_3493 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956842; hypothetical protein 647353 10494853 Spico_0563 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411173.1 646811 D 760011 CDS YP_004411174.1 330836533 10494854 647350..648192 1 NC_015436.1 KEGG: lcz:LCAZH_2061 sucrose PTS, EIIBCA; SPTR: uncharacterized protein; IMG reference gene:2503956843; hypothetical protein 648192 10494854 Spico_0564 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411174.1 647350 D 760011 CDS YP_004411175.1 330836534 10494855 648334..649182 1 NC_015436.1 COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: btl:BALH_2607 ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter; IMG reference gene:2503956844; ABC transporter 649182 10494855 Spico_0565 Sphaerochaeta coccoides DSM 17374 ABC transporter YP_004411175.1 648334 D 760011 CDS YP_004411176.1 330836535 10494856 649183..649869 1 NC_015436.1 KEGG: bth:BT_4430 cytochrome c biogenesis protein (CcsA); SPTR: Permease; IMG reference gene:2503956845; hypothetical protein 649869 10494856 Spico_0566 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411176.1 649183 D 760011 CDS YP_004411177.1 330836536 10494857 649945..650586 1 NC_015436.1 COGs: COG4832 conserved hypothetical protein; InterPro IPR019233; KEGG: mla:Mlab_0505 hypothetical protein; PFAM: Protein of unknown function DUF2174, N-terminal; SPTR: uncharacterized protein; IMG reference gene:2503956846; PFAM: Uncharacterized conserved protein (DUF2174); hypothetical protein 650586 10494857 Spico_0567 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411177.1 649945 D 760011 CDS YP_004411178.1 330836537 10494858 650590..651036 1 NC_015436.1 COGs: COG3871 Uncharacterized stress protein (general stress protein 26); InterPro IPR011576; KEGG: bth:BT_1384 hypothetical protein; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; SPTR: uncharacterized protein; IMG reference gene:2503956847; PFAM: Pyridoxamine 5'-phosphate oxidase; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 651036 10494858 Spico_0568 Sphaerochaeta coccoides DSM 17374 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_004411178.1 650590 D 760011 CDS YP_004411179.1 330836538 10494859 651175..651525 1 NC_015436.1 COGs: COG4898 conserved hypothetical protein; InterPro IPR014580; KEGG: dae:Dtox_0463 hypothetical protein; PFAM: Uncharacterised conserved protein UCP033199; SPTR: uncharacterized protein; IMG reference gene:2503956848; PFAM: Uncharacterized protein conserved in bacteria (DUF2200); hypothetical protein 651525 10494859 Spico_0569 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411179.1 651175 D 760011 CDS YP_004411180.1 330836539 10494860 complement(651645..652643) 1 NC_015436.1 COGs: COG5621 secreted hydrolase; KEGG: ckr:CKR_2552 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956849; PFAM: Hydroxyneurosporene synthase (CrtC); hypothetical protein 652643 10494860 Spico_0570 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411180.1 651645 R 760011 CDS YP_004411181.1 330836540 10494861 652955..653629 1 NC_015436.1 KEGG: ols:Olsu_1506 nitroreductase; SPTR: uncharacterized protein; IMG reference gene:2503956850; nitroreductase 653629 10494861 Spico_0571 Sphaerochaeta coccoides DSM 17374 nitroreductase YP_004411181.1 652955 D 760011 CDS YP_004411182.1 330836541 10494862 complement(653696..655159) 1 NC_015436.1 COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR013027:IPR006005; KEGG: pdi:BDI_0325 glutamate synthase, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: Glutamate synthase (NADPH); SPTR: Glutamate synthase, small subunit; TIGRFAM: Glutamate synthase, NADH/NADPH, small subunit 1; IMG reference gene:2503956851; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthases, NADH/NADPH, small subunit; glutamate synthase (NADH) small subunit 655159 10494862 Spico_0572 Sphaerochaeta coccoides DSM 17374 glutamate synthase (NADH) small subunit YP_004411182.1 653696 R 760011 CDS YP_004411183.1 330836542 10494863 complement(655162..659748) 1 NC_015436.1 COGs: COG0069 Glutamate synthase domain 2; InterPro IPR000583:IPR006982:IPR002932:IPR002489; KEGG: pdi:BDI_0326 glutamate synthase, large subunit; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal; PRIAM: Glutamate synthase (ferredoxin); SPTR: Glutamate synthase, large subunit; IMG reference gene:2503956852; PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II; glutamate synthase (NADH) large subunit 659748 10494863 Spico_0573 Sphaerochaeta coccoides DSM 17374 glutamate synthase (NADH) large subunit YP_004411183.1 655162 R 760011 CDS YP_004411184.1 330836543 10494864 complement(659988..660422) 1 NC_015436.1 COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: dsy:DSY4193 hypothetical protein; PFAM: Transcription regulator Rrf2; SPTR: uncharacterized protein; TIGRFAM: Transcription regulator Rrf2; IMG reference gene:2503956853; PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; AsnC family transcriptional regulator 660422 10494864 Spico_0574 Sphaerochaeta coccoides DSM 17374 AsnC family transcriptional regulator YP_004411184.1 659988 R 760011 CDS YP_004411185.1 330836544 10494865 complement(660419..660859) 1 NC_015436.1 COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: cce:Ccel_1933 transcriptional regulator, BadM/Rrf2 family; PFAM: Transcription regulator Rrf2; SPTR: Transcriptional regulator, BadM/Rrf2 family; TIGRFAM: Transcription regulator Rrf2; IMG reference gene:2503956854; PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; AsnC family transcriptional regulator 660859 10494865 Spico_0575 Sphaerochaeta coccoides DSM 17374 AsnC family transcriptional regulator YP_004411185.1 660419 R 760011 CDS YP_004411186.1 330836545 10494866 661001..661807 1 NC_015436.1 COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198; KEGG: cak:Caul_2944 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Oxidoreductase, short chain dehydrogenase/reductase; IMG reference gene:2503956855; PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 661807 10494866 Spico_0576 Sphaerochaeta coccoides DSM 17374 short-chain dehydrogenase/reductase SDR YP_004411186.1 661001 D 760011 CDS YP_004411187.1 330836546 10494867 complement(661808..663046) 1 NC_015436.1 COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: ssm:Spirs_2778 integrase; PFAM: Integrase, catalytic core, phage; SPTR: Lj965 prophage integrase; IMG reference gene:2503956856; PFAM: Phage integrase; integrase 663046 10494867 Spico_0577 Sphaerochaeta coccoides DSM 17374 integrase YP_004411187.1 661808 R 760011 CDS YP_004411188.1 330836547 10494868 complement(663626..664099) 1 NC_015436.1 COGs: COG0691 tmRNA-binding protein; HAMAP: SsrA-binding protein; InterPro IPR000037; KEGG: ssm:Spirs_2009 SsrA-binding protein; PFAM: SsrA-binding protein; SPTR: SsrA-binding protein; TIGRFAM: SsrA-binding protein; IMG reference gene:2503956857; PFAM: SmpB protein; TIGRFAM: SsrA-binding protein; SsrA-binding protein 664099 10494868 Spico_0578 Sphaerochaeta coccoides DSM 17374 SsrA-binding protein YP_004411188.1 663626 R 760011 CDS YP_004411189.1 330836548 10494869 complement(664104..665561) 1 NC_015436.1 COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: ssm:Spirs_2010 protein of unknown function DUF323; PFAM: Sulphatase-modifying factor; SPTR: uncharacterized protein; IMG reference gene:2503956858; PFAM: Formylglycine-generating sulfatase enzyme; sulfatase-modifying factor protein 665561 10494869 Spico_0579 Sphaerochaeta coccoides DSM 17374 sulfatase-modifying factor protein YP_004411189.1 664104 R 760011 CDS YP_004411190.1 330836549 10494870 665628..666635 1 NC_015436.1 InterPro IPR019759:IPR000223; KEGG: ssm:Spirs_2011 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: Signal peptidase I; TIGRFAM: Peptidase S26A, signal peptidase I; IMG reference gene:2503956859; PFAM: Peptidase S26; TIGRFAM: signal peptidase I, bacterial type; signal peptidase I 666635 10494870 Spico_0580 Sphaerochaeta coccoides DSM 17374 signal peptidase I YP_004411190.1 665628 D 760011 CDS YP_004411191.1 330836550 10494871 666632..667834 1 NC_015436.1 COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterPro IPR007197:IPR010723:IPR004559:IPR006638; KEGG: dba:Dbac_3351 oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN, C-terminal; Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; IMG reference gene:2503956860; PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; oxygen-independent coproporphyrinogen III oxidase 667834 10494871 Spico_0581 Sphaerochaeta coccoides DSM 17374 oxygen-independent coproporphyrinogen III oxidase YP_004411191.1 666632 D 760011 CDS YP_004411192.1 330836551 10494872 667930..668673 1 NC_015436.1 COGs: COG0217 conserved hypothetical protein; HAMAP: Protein of unknown function DUF28; InterPro IPR002876; KEGG: ssm:Spirs_2014 protein of unknown function DUF28; PFAM: Protein of unknown function DUF28; SPTR: uncharacterized protein; TIGRFAM: Protein of unknown function DUF28; IMG reference gene:2503956861; PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family; hypothetical protein 668673 10494872 Spico_0582 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411192.1 667930 D 760011 CDS YP_004411193.1 330836552 10494873 668612..669166 1 NC_015436.1 COGs: COG0817 Holliday junction resolvasome endonuclease subunit; HAMAP: Crossover junction endodeoxyribonuclease RuvC; InterPro IPR002176; KEGG: ssm:Spirs_2015 crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC; PRIAM: Crossover junction endodeoxyribonuclease; SPTR: Crossover junction endodeoxyribonuclease ruvC; TIGRFAM: Crossover junction endodeoxyribonuclease RuvC; IMG reference gene:2503956862; PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; Crossover junction endodeoxyribonuclease ruvC 669166 10494873 Spico_0583 Sphaerochaeta coccoides DSM 17374 Crossover junction endodeoxyribonuclease ruvC YP_004411193.1 668612 D 760011 CDS YP_004411194.1 330836553 10494874 669254..669883 1 NC_015436.1 COGs: COG0632 Holliday junction resolvasome DNA-binding subunit; HAMAP: Bacterial DNA recombination protein RuvA; InterPro IPR000085:IPR013849:IPR003583; KEGG: tpp:TPASS_0543 Holliday junction DNA helicase, subunit A; PFAM: DNA helicase, Holliday junction RuvA type, domain I, bacterial; SPTR: Holliday junction ATP-dependent DNA helicase ruvA; TIGRFAM: Bacterial DNA recombination protein RuvA; IMG reference gene:2503956863; PFAM: RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit; Holliday junction DNA helicase subunit RuvA 669883 10494874 Spico_0584 Sphaerochaeta coccoides DSM 17374 Holliday junction DNA helicase subunit RuvA YP_004411194.1 669254 D 760011 CDS YP_004411195.1 330836554 10494875 669889..670959 1 NC_015436.1 COGs: COG2255 Holliday junction resolvasome helicase subunit; HAMAP: DNA helicase, Holliday junction RuvB type; InterProIPR004605:IPR008824:IPR003959:IPR008823:IPR 003593; KEGG: ssm:Spirs_2017 Holliday junction DNA helicase RuvB; PFAM: DNA helicase, Holliday junction RuvB type, C-terminal; ATPase, AAA-type, core; DNA helicase, Holliday junction RuvB type, N-terminal; SMART: ATPase, AAA+ type, core; SPTR: Holliday junction ATP-dependent DNA helicase ruvB; TIGRFAM: DNA helicase, Holliday junction RuvB type; IMG reference gene:2503956864; PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit; Holliday junction DNA helicase subunit RuvB 670959 10494875 Spico_0585 Sphaerochaeta coccoides DSM 17374 Holliday junction DNA helicase subunit RuvB YP_004411195.1 669889 D 760011 CDS YP_004411196.1 330836555 10494876 670934..671974 1 NC_015436.1 COGs: COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); HAMAP: Queuosine biosynthesis protein; InterPro IPR003699; KEGG: ssm:Spirs_2018 S-adenosylmethionine/tRNA-ribosyltransferase-iso merase; PFAM: Queuosine biosynthesis protein; SPTR: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM: Queuosine biosynthesis protein; IMG reference gene:2503956865; PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 671974 10494876 Spico_0586 Sphaerochaeta coccoides DSM 17374 S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_004411196.1 670934 D 760011 CDS YP_004411197.1 330836556 10494877 complement(672002..672649) 1 NC_015436.1 COGs: COG0125 Thymidylate kinase; HAMAP: Thymidylate kinase; InterPro IPR018094; KEGG: tpp:TPASS_0354 thymidylate kinase; PFAM: Thymidylate kinase; PRIAM: dTMP kinase; SPTR: Thymidylate kinase; TIGRFAM: Thymidylate kinase; IMG reference gene:2503956866; PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase; thymidylate kinase 672649 10494877 Spico_0587 Sphaerochaeta coccoides DSM 17374 thymidylate kinase YP_004411197.1 672002 R 760011 CDS YP_004411198.1 330836557 10494878 672899..677851 1 NC_015436.1 InterPro IPR007452; KEGG: ssm:Spirs_2021 protein of unknown function DUF490; PFAM: Protein of unknown function DUF490; SPTR: uncharacterized protein; IMG reference gene:2503956867; PFAM: Family of unknown function (DUF490); hypothetical protein 677851 10494878 Spico_0588 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411198.1 672899 D 760011 CDS YP_004411199.1 330836558 10494879 677872..680397 1 NC_015436.1 COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827:IPR000184:IPR016474; KEGG: ssm:Spirs_2022 outer membrane protein assembly complex, YaeT protein; PFAM: Bacterial surface antigen (D15); Surface antigen variable number; SPTR: surface antigen; TIGRFAM: Outer membrane assembly protein, YaeT; IMG reference gene:2503956868; PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein; outer membrane protein assembly complex, YaeT protein 680397 10494879 Spico_0589 Sphaerochaeta coccoides DSM 17374 outer membrane protein assembly complex, YaeT protein YP_004411199.1 677872 D 760011 CDS YP_004411200.1 330836559 10494880 680475..683129 1 NC_015436.1 COGs: COG0249 Mismatch repair ATPase (MutS family); HAMAP: DNA mismatch repair protein MutS, type 1; InterProIPR005748:IPR007695:IPR007860:IPR007696:IPR 007861:IPR000432; KEGG: ssm:Spirs_2024 DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS-like, N-terminal; DNA mismatch repair protein MutS, connector; DNA mismatch repair protein MutS, core; DNA mismatch repair protein MutS, clamp; SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; SPTR: DNA mismatch repair protein MutS; TIGRFAM: DNA mismatch repair protein MutS, type 1; IMG reference gene:2503956869; PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS; DNA mismatch repair protein mutS 683129 10494880 Spico_0590 Sphaerochaeta coccoides DSM 17374 DNA mismatch repair protein mutS YP_004411200.1 680475 D 760011 CDS YP_004411201.1 330836560 10494881 683150..683866 1 NC_015436.1 COGs: COG1040 amidophosphoribosyltransferase; KEGG: ele:Elen_1211 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956870; hypothetical protein 683866 10494881 Spico_0591 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411201.1 683150 D 760011 CDS YP_004411202.1 330836561 10494882 684025..684525 1 NC_015436.1 HAMAP: Ribosome maturation factor RimP; InterPro IPR003728; KEGG: sta:STHERM_c11200 hypothetical protein; PFAM: Ribosome maturation factor RimP; SPTR: uncharacterized protein; IMG reference gene:2503956871; PFAM: Uncharacterised BCR, YhbC family COG0779; Ribosome maturation factor rimP 684525 10494882 Spico_0592 Sphaerochaeta coccoides DSM 17374 Ribosome maturation factor rimP YP_004411202.1 684025 D 760011 CDS YP_004411203.1 330836562 10494883 684515..685948 1 NC_015436.1 COGs: COG0195 Transcription elongation factor; InterProIPR013735:IPR003029:IPR010213:IPR022967:IPR 004087; KEGG: ssm:Spirs_2027 transcription termination factor NusA; PFAM: Transcription factor NusA, N-terminal; Ribosomal protein S1, RNA-binding domain; SMART: RNA-binding domain, S1; K Homology; SPTR: uncharacterized protein; TIGRFAM: Transcription termination factor NusA; IMG reference gene:2503956872; PFAM: NusA N-terminal domain; S1 RNA binding domain; Mitochondrial ribosomal protein MRP-S35; TIGRFAM: transcription termination factor NusA; NusA antitermination factor 685948 10494883 Spico_0593 Sphaerochaeta coccoides DSM 17374 NusA antitermination factor YP_004411203.1 684515 D 760011 CDS YP_004411204.1 330836563 10494884 685992..688937 1 NC_015436.1 COGs: COG0532 Translation initiation factor 2 (IF-2; GTPase); InterProIPR006847:IPR000795:IPR004161:IPR000178:IPR 005225; KEGG: ssm:Spirs_2028 translation initiation factor IF-2; PFAM: Protein synthesis factor, GTP-binding; Translation initiation factor IF-2, N-terminal; Translation elongation factor EFTu/EF1A, domain 2; SPTR: Translation initiation factor IF-2; TIGRFAM: Translation initiation factor aIF-2, bacterial-like; Small GTP-binding protein; IMG reference gene:2503956873; PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2; translation initiation factor 2 (bIF-2) 688937 10494884 Spico_0594 Sphaerochaeta coccoides DSM 17374 translation initiation factor 2 (bIF-2) YP_004411204.1 685992 D 760011 CDS YP_004411205.1 330836564 10494885 688947..689321 1 NC_015436.1 COGs: COG0858 Ribosome-binding factor A; HAMAP: Ribosome-binding factor A; InterPro IPR000238; KEGG: ssm:Spirs_2029 ribosome-binding factor A; PFAM: Ribosome-binding factor A; SPTR: Ribosome-binding factor A; TIGRFAM: Ribosome-binding factor A; IMG reference gene:2503956874; PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; Ribosome-binding factor A 689321 10494885 Spico_0595 Sphaerochaeta coccoides DSM 17374 Ribosome-binding factor A YP_004411205.1 688947 D 760011 CDS YP_004411206.1 330836565 10494886 689311..690186 1 NC_015436.1 COGs: COG0130 Pseudouridine synthase; HAMAP: tRNA pseudouridine synthase II, TruB; InterPro IPR014780:IPR002501; KEGG: sta:STHERM_c11160 tRNA pseudouridine 55 synthase; PFAM: Pseudouridine synthase II; SPTR: tRNA pseudouridine 55 synthase; TIGRFAM: tRNA pseudouridine synthase II, TruB; IMG reference gene:2503956875; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase; tRNA pseudouridine synthase B 690186 10494886 Spico_0596 Sphaerochaeta coccoides DSM 17374 tRNA pseudouridine synthase B YP_004411206.1 689311 D 760011 CDS YP_004411207.1 330836566 10494887 690221..691117 1 NC_015436.1 COGs: COG0196 FAD synthase; InterPro IPR015864; KEGG: sta:STHERM_c11150 riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; SPTR: Riboflavin biosynthesis protein RibF; IMG reference gene:2503956876; PFAM: FAD synthetase; FAD synthetase 691117 10494887 Spico_0597 Sphaerochaeta coccoides DSM 17374 FAD synthetase YP_004411207.1 690221 D 760011 CDS YP_004411208.1 330836567 10494888 691117..691383 1 NC_015436.1 COGs: COG0184 Ribosomal protein S15P/S13E; InterPro IPR000589:IPR005290; KEGG: ssm:Spirs_2032 ribosomal protein S15; PFAM: Ribosomal protein S15; SPTR: 30S ribosomal protein S15; TIGRFAM: Ribosomal protein S15, bacterial-type; IMG reference gene:2503956877; PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle; 30S ribosomal protein S15 691383 10494888 Spico_0598 Sphaerochaeta coccoides DSM 17374 30S ribosomal protein S15 YP_004411208.1 691117 D 760011 CDS YP_004411209.1 330836568 10494889 691522..693639 1 NC_015436.1 COGs: COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); HAMAP: Polyribonucleotide nucleotidyltransferase; InterProIPR012162:IPR001247:IPR015847:IPR015848:IPR 018111:IPR003029:IPR004087:IPR022967; KEGG: ssm:Spirs_2033 polyribonucleotide nucleotidyltransferase; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; K Homology, type 1, subgroup; Ribosomal protein S1, RNA-binding domain; PRIAM: Polyribonucleotide nucleotidyltransferase; SMART: RNA-binding domain, S1; K Homology; SPTR: Polyribonucleotide nucleotidyltransferase; TIGRFAM: Polyribonucleotide nucleotidyltransferase; IMG reference gene:2503956878; PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease, domain 1; 3' exoribonuclease, domain 2; Polyribonucleotide nucleotidyltransferase, RNA binding domain; TIGRFAM: polyribonucleotide nucleotidyltransferase; polyribonucleotide nucleotidyltransferase 693639 10494889 Spico_0599 Sphaerochaeta coccoides DSM 17374 polyribonucleotide nucleotidyltransferase YP_004411209.1 691522 D 760011 CDS YP_004411210.1 330836569 10494890 693639..694085 1 NC_015436.1 COGs: COG0756 dUTPase; HAMAP: DeoxyUTP pyrophosphatase; InterPro IPR008181:IPR008180; KEGG: rpc:RPC_0381 deoxyuridine 5'-triphosphate nucleotidohydrolase; PFAM: DeoxyUTP pyrophosphatase domain; PRIAM: dUTP diphosphatase; SPTR: Deoxyuridine 5'-triphosphate nucleotidohydrolase; TIGRFAM: DeoxyUTP pyrophosphatase; IMG reference gene:2503956879; PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut); deoxyuridine 5'-triphosphate nucleotidohydrolase 694085 10494890 Spico_0600 Sphaerochaeta coccoides DSM 17374 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_004411210.1 693639 D 760011 CDS YP_004411211.1 330836570 10494891 694096..695379 1 NC_015436.1 COGs: COG0795 permease; InterPro IPR005495; KEGG: sta:STHERM_c11120 hypothetical protein; PFAM: Permease YjgP/YjgQ, predicted; SPTR: uncharacterized protein; IMG reference gene:2503956880; PFAM: Predicted permease YjgP/YjgQ family; YjgP/YjgQ family permease 695379 10494891 Spico_0601 Sphaerochaeta coccoides DSM 17374 YjgP/YjgQ family permease YP_004411211.1 694096 D 760011 CDS YP_004411212.1 330836571 10494892 695376..696467 1 NC_015436.1 COGs: COG0795 permease; InterPro IPR005495; KEGG: sta:STHERM_c11110 permease YjgP/YjgQ family protein; PFAM: Permease YjgP/YjgQ, predicted; SPTR: Permease YjgP/YjgQ family protein; IMG reference gene:2503956881; PFAM: Predicted permease YjgP/YjgQ family; YjgP/YjgQ family permease 696467 10494892 Spico_0602 Sphaerochaeta coccoides DSM 17374 YjgP/YjgQ family permease YP_004411212.1 695376 D 760011 CDS YP_004411213.1 330836572 10494893 696487..697626 1 NC_015436.1 COGs: COG0343 Queuine/archaeosine tRNA-ribosyltransferase; HAMAP: Queuine tRNA-ribosyltransferase; InterPro IPR004803:IPR002616; KEGG: ssm:Spirs_2037 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; PRIAM: tRNA-guanine transglycosylase; SPTR: Queuine tRNA-ribosyltransferase; TIGRFAM: Queuine tRNA-ribosyltransferase; Queuine/other tRNA-ribosyltransferase; IMG reference gene:2503956882; PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming; tRNA-guanine transglycosylase 697626 10494893 Spico_0603 Sphaerochaeta coccoides DSM 17374 tRNA-guanine transglycosylase YP_004411213.1 696487 D 760011 CDS YP_004411214.1 330836573 10494894 697619..699181 1 NC_015436.1 COGs: COG0728 membrane protein virulence factor; InterPro IPR004268; KEGG: sta:STHERM_c11090 virulence factor MviN; PFAM: Flagellin assembly, membrane protein MviN; SPTR: Virulence factor MviN; TIGRFAM: Flagellin assembly, membrane protein MviN; IMG reference gene:2503956883; PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN; integral membrane protein MviN 699181 10494894 Spico_0604 Sphaerochaeta coccoides DSM 17374 integral membrane protein MviN YP_004411214.1 697619 D 760011 CDS YP_004411215.1 330836574 10494895 complement(699271..701964) 1 NC_015436.1 COGs: COG1747 Uncharacterized N-terminal domain of the transcription elongation factor GreA; InterPro IPR022691:IPR001437; KEGG: ssm:Spirs_2041 transcription elongation factor GreA; PFAM: Transcription elongation factor, GreA/GreB, N-terminal; Transcription elongation factor, GreA/GreB, C-terminal; SPTR: uncharacterized protein; IMG reference gene:2503956884; PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA; Transcription elongation factor, GreA/GreB, N-terminal protein 701964 10494895 Spico_0605 Sphaerochaeta coccoides DSM 17374 Transcription elongation factor, GreA/GreB, N-terminal protein YP_004411215.1 699271 R 760011 CDS YP_004411216.1 330836575 10494896 702299..702973 1 NC_015436.1 COGs: COG0036 Pentose-5-phosphate-3-epimerase; InterPro IPR000056; KEGG: tde:TDE2597 ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3-epimerase; PRIAM: Ribulose-phosphate 3-epimerase; SPTR: Ribulose-phosphate 3-epimerase; TIGRFAM: Ribulose-phosphate 3-epimerase; IMG reference gene:2503956885; PFAM: Ribulose-phosphate 3 epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; ribulose-5-phosphate 3-epimerase 702973 10494896 Spico_0606 Sphaerochaeta coccoides DSM 17374 ribulose-5-phosphate 3-epimerase YP_004411216.1 702299 D 760011 CDS YP_004411217.1 330836576 10494897 702970..703443 1 NC_015436.1 COGs: COG1490 D-Tyr-tRNAtyr deacylase; HAMAP: D-tyrosyl-tRNA(Tyr) deacylase; InterPro IPR003732; KEGG: trq:TRQ2_0197 D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase; SPTR: D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; IMG reference gene:2503956886; PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; D-tyrosyl-tRNA(Tyr) deacylase 703443 10494897 Spico_0607 Sphaerochaeta coccoides DSM 17374 D-tyrosyl-tRNA(Tyr) deacylase YP_004411217.1 702970 D 760011 CDS YP_004411218.1 330836577 10494898 703499..704560 1 NC_015436.1 COGs: COG0468 RecA/RadA recombinase; HAMAP: DNA recombination and repair protein RecA; InterPro IPR013765:IPR003593; KEGG: tde:TDE0872 recombinase A; PFAM: DNA recombination and repair protein RecA; SMART: ATPase, AAA+ type, core; SPTR: Protein recA; TIGRFAM: DNA recombination and repair protein RecA; IMG reference gene:2503956887; PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA; recombinase A 704560 10494898 Spico_0608 Sphaerochaeta coccoides DSM 17374 recombinase A YP_004411218.1 703499 D 760011 CDS YP_004411219.1 330836578 10494899 704637..705545 1 NC_015436.1 COGs: COG1354 conserved hypothetical protein; InterPro IPR003768; KEGG: ssm:Spirs_2052 chromosome segregation and condensation protein ScpA; PFAM: Prokaryotic chromosome segregation/condensation protein ScpA; SPTR: uncharacterized protein; IMG reference gene:2503956888; PFAM: ScpA/B protein; chromosome segregation and condensation protein ScpA 705545 10494899 Spico_0609 Sphaerochaeta coccoides DSM 17374 chromosome segregation and condensation protein ScpA YP_004411219.1 704637 D 760011 CDS YP_004411220.1 330836579 10494900 705557..706261 1 NC_015436.1 COGs: COG1386 transcriptional regulator protein containing the HTH domain; InterPro IPR005234; KEGG: ssm:Spirs_2053 chromosome segregation and condensation protein, ScpB; PFAM: Chromosome segregation/condensation protein ScpB, prokaryote; SPTR: Transcriptional regulator, ; TIGRFAM: Chromosome segregation/condensation protein ScpB, prokaryote; IMG reference gene:2503956889; PFAM: transcriptional regulators (Ypuh-like); TIGRFAM: segregation and condensation protein B; chromosome segregation and condensation protein ScpB 706261 10494900 Spico_0610 Sphaerochaeta coccoides DSM 17374 chromosome segregation and condensation protein ScpB YP_004411220.1 705557 D 760011 CDS YP_004411221.1 330836580 10494901 706251..706997 1 NC_015436.1 COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterPro IPR002942:IPR006145:IPR000748; KEGG: ssm:Spirs_2054 RNA-binding S4 domain protein; PFAM: RNA-binding S4; Pseudouridine synthase, RsuA and RluB/C/D/E/F; SMART: RNA-binding S4; SPTR: Pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RsuA/RluB/E/F; IMG reference gene:2503956890; PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; pseudouridine synthase 706997 10494901 Spico_0611 Sphaerochaeta coccoides DSM 17374 pseudouridine synthase YP_004411221.1 706251 D 760011 CDS YP_004411222.1 330836581 10494902 706997..707650 1 NC_015436.1 COGs: COG0283 Cytidylate kinase; HAMAP: Cytidylate kinase; InterPro IPR003136:IPR011994; KEGG: ssm:Spirs_2055 cytidylate kinase; PFAM: Cytidylate kinase domain; SPTR: Cytidylate kinase; TIGRFAM: Cytidylate kinase; IMG reference gene:2503956891; PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase; cytidylate kinase 707650 10494902 Spico_0612 Sphaerochaeta coccoides DSM 17374 cytidylate kinase YP_004411222.1 706997 D 760011 CDS YP_004411223.1 330836582 10494903 707678..709393 1 NC_015436.1 COGs: COG0539 Ribosomal protein S1; InterPro IPR003029:IPR022967; KEGG: ssm:Spirs_2056 ribosomal protein S1; PFAM: Ribosomal protein S1, RNA-binding domain; SMART: RNA-binding domain, S1; SPTR: Cytidylate kinase/ribosomal protein S1; IMG reference gene:2503956892; PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1; RNA binding S1 domain-containing protein 709393 10494903 Spico_0613 Sphaerochaeta coccoides DSM 17374 RNA binding S1 domain-containing protein YP_004411223.1 707678 D 760011 CDS YP_004411224.1 330836583 10494904 709408..710097 1 NC_015436.1 InterPro IPR013105; KEGG: sta:STHERM_c10950 hypothetical protein; PFAM: Tetratricopeptide TPR2; SPTR: uncharacterized protein; IMG reference gene:2503956893; hypothetical protein 710097 10494904 Spico_0614 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411224.1 709408 D 760011 CDS YP_004411225.1 330836584 10494905 710117..710968 1 NC_015436.1 KEGG: tgu:100222319 similar to von Willebrand factor; SPTR: ATP-dependent zinc metalloprotease FtsH homolog; IMG reference gene:2503956894; hypothetical protein 710968 10494905 Spico_0615 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411225.1 710117 D 760011 CDS YP_004411226.1 330836585 10494906 711173..712012 1 NC_015436.1 COGs: COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain; InterPro IPR004518:IPR011551; KEGG: ssm:Spirs_2069 MazG family protein; PFAM: NTP pyrophosphohydrolase MazG, catalytic core; SPTR: uncharacterized protein; TIGRFAM: NTP pyrophosphohydrolase MazG, bacterial; IMG reference gene:2503956895; PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein; nucleotide pyrophosphohydrolase 712012 10494906 Spico_0616 Sphaerochaeta coccoides DSM 17374 nucleotide pyrophosphohydrolase YP_004411226.1 711173 D 760011 CDS YP_004411227.1 330836586 10494908 complement(712417..713229) 1 NC_015436.1 COGs: COG1579 Zn-ribbon protein possibly nucleic acid-binding; InterPro IPR003743; KEGG: ssm:Spirs_2077 protein of unknown function DUF164; PFAM: Protein of unknown function DUF164; SPTR: nucleic acid-binding Zn-ribbon protein; IMG reference gene:2503956897; PFAM: zinc ribbon domain; hypothetical protein 713229 10494908 Spico_0617 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411227.1 712417 R 760011 CDS YP_004411228.1 330836587 10494909 complement(713359..715416) 1 NC_015436.1 COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR009042:IPR007627:IPR007624:IPR007630:IPR 014284:IPR012760; KEGG: ssm:Spirs_2078 RNA polymerase, sigma 70 subunit, RpoD subfamily; PFAM: RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 4; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor RpoD, C-terminal; RNA polymerase sigma-70; IMG reference gene:2503956898; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain; RNA polymerase sigma-70 subunit RpoD 715416 10494909 Spico_0618 Sphaerochaeta coccoides DSM 17374 RNA polymerase sigma-70 subunit RpoD YP_004411228.1 713359 R 760011 CDS YP_004411229.1 330836588 10494910 complement(715492..717300) 1 NC_015436.1 COGs: COG0358 DNA primase; InterPro IPR002694:IPR013264:IPR006171:IPR006295; KEGG: ssm:Spirs_2079 DNA primase; PFAM: DNA primase, catalytic core, N-terminal; Zinc finger, CHC2-type; Toprim domain; SPTR: DNA primase; TIGRFAM: DNA primase, DnaG; IMG reference gene:2503956899; PFAM: Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; DnaB-helicase binding domain of primase; TIGRFAM: DNA primase, catalytic core; DNA primase 717300 10494910 Spico_0619 Sphaerochaeta coccoides DSM 17374 DNA primase YP_004411229.1 715492 R 760011 CDS YP_004411230.1 330836589 10494911 complement(717326..717772) 1 NC_015436.1 InterPro IPR005358; KEGG: sta:STHERM_c10760 hypothetical protein; PFAM: Uncharacterised protein family UPF0153; SPTR: uncharacterized protein; IMG reference gene:2503956900; PFAM: Uncharacterised protein family (UPF0153); hypothetical protein 717772 10494911 Spico_0620 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411230.1 717326 R 760011 CDS YP_004411231.1 330836590 10494913 718151..719386 1 NC_015436.1 COGs: COG2309 Leucyl aminopeptidase (aminopeptidase T); InterPro IPR000787; KEGG: lsp:Bsph_0293 aminopeptidase AmpS; PFAM: Peptidase M29, aminopeptidase II; SPTR: Aminopeptidase ampS; IMG reference gene:2503956902; PFAM: Thermophilic metalloprotease (M29); peptidase M29 aminopeptidase II 719386 10494913 Spico_0621 Sphaerochaeta coccoides DSM 17374 peptidase M29 aminopeptidase II YP_004411231.1 718151 D 760011 CDS YP_004411232.1 330836591 10494914 719389..720615 1 NC_015436.1 COGs: COG2309 Leucyl aminopeptidase (aminopeptidase T); InterPro IPR000787; KEGG: baf:BAPKO_0070 aminopeptidase II; PFAM: Peptidase M29, aminopeptidase II; SPTR: Aminopeptidase II; IMG reference gene:2503956903; PFAM: Thermophilic metalloprotease (M29); peptidase M29 aminopeptidase II 720615 10494914 Spico_0622 Sphaerochaeta coccoides DSM 17374 peptidase M29 aminopeptidase II YP_004411232.1 719389 D 760011 CDS YP_004411233.1 330836592 10494915 complement(720635..721408) 1 NC_015436.1 COGs: COG1521 transcriptional regulator protein; HAMAP: Type III pantothenate kinase; InterPro IPR004619; KEGG: afn:Acfer_1593 transcriptional activator, Baf family; PFAM: Type III pantothenate kinase; PRIAM: Pantothenate kinase; SPTR: Type III pantothenate kinase; TIGRFAM: Type III pantothenate kinase; IMG reference gene:2503956904; PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III; Baf family transcriptional acitvator 721408 10494915 Spico_0623 Sphaerochaeta coccoides DSM 17374 Baf family transcriptional acitvator YP_004411233.1 720635 R 760011 CDS YP_004411234.1 330836593 10494916 complement(721419..723056) 1 NC_015436.1 COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003439:IPR003593; KEGG: ssm:Spirs_1718 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; IMG reference gene:2503956905; PFAM: ABC transporter; ABC transporter 723056 10494916 Spico_0624 Sphaerochaeta coccoides DSM 17374 ABC transporter YP_004411234.1 721419 R 760011 CDS YP_004411235.1 330836594 10494919 complement(723381..723911) 1 NC_015436.1 COGs: COG0503 Adenine/guanine phosphoribosyltransferase and related PRPP-binding protein; HAMAP: Adenine phosphoribosyl transferase; InterPro IPR000836:IPR005764; KEGG: tde:TDE1684 adenine phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; SPTR: Adenine phosphoribosyltransferase; TIGRFAM: Adenine phosphoribosyl transferase; IMG reference gene:2503956908; PFAM: Phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase; adenine phosphoribosyltransferase 723911 10494919 Spico_0625 Sphaerochaeta coccoides DSM 17374 adenine phosphoribosyltransferase YP_004411235.1 723381 R 760011 CDS YP_004411236.1 330836595 10494920 complement(723938..724951) 1 NC_015436.1 COGs: COG0533 Metal-dependent protease with possible chaperone activity; HAMAP: Peptidase M22, O-sialoglycoprotein peptidase; InterPro IPR000905:IPR022450:IPR017861; KEGG: ssm:Spirs_1796 metalloendopeptidase, glycoprotease; PFAM: Peptidase M22, glycoprotease; PRIAM: O-sialoglycoprotein endopeptidase; SPTR: Probable O-sialoglycoprotein endopeptidase; TIGRFAM: Peptidase M22, O-sialoglycoprotein peptidase; Peptidase M22, glycoprotease, subgroup; IMG reference gene:2503956909; PFAM: Glycoprotease; TIGRFAM: glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family; O-sialoglycoprotein endopeptidase 724951 10494920 Spico_0626 Sphaerochaeta coccoides DSM 17374 O-sialoglycoprotein endopeptidase YP_004411236.1 723938 R 760011 CDS YP_004411237.1 330836596 10494921 complement(724974..725225) 1 NC_015436.1 IMG reference gene:2503956910; hypothetical protein 725225 10494921 Spico_0627 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411237.1 724974 R 760011 CDS YP_004411238.1 330836597 10494923 complement(725658..728366) 1 NC_015436.1 COGs: COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; InterPro IPR002192:IPR008279:IPR000121:IPR010121; KEGG: rmr:Rmar_0942 pyruvate, phosphate dikinase; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme; PRIAM: Pyruvate, phosphate dikinase; SPTR: Pyruvate, phosphate dikinase; TIGRFAM: Pyruvate, phosphate dikinase; IMG reference gene:2503956912; PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: pyruvate, phosphate dikinase; pyruvate phosphate dikinase 728366 10494923 Spico_0628 Sphaerochaeta coccoides DSM 17374 pyruvate phosphate dikinase YP_004411238.1 725658 R 760011 CDS YP_004411239.1 330836598 10494924 complement(728660..729541) 1 NC_015436.1 COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR009042:IPR007627:IPR007624:IPR007630:IPR 014284; KEGG: ssm:Spirs_1715 RNA polymerase, sigma 70 subunit, RpoD subfamily; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 3; SPTR: RNA polymerase sigma-70 factor family protein; TIGRFAM: RNA polymerase sigma-70; IMG reference gene:2503956913; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RpoD subfamily RNA polymerase sigma-70 subunit 729541 10494924 Spico_0629 Sphaerochaeta coccoides DSM 17374 RpoD subfamily RNA polymerase sigma-70 subunit YP_004411239.1 728660 R 760011 CDS YP_004411240.1 330836599 10494925 complement(729818..730516) 1 NC_015436.1 KEGG: ncr:NCU05178 hypothetical protein; SPTR: 3-deoxy-D-manno-octulosonic-acid transferase; IMG reference gene:2503956914; hypothetical protein 730516 10494925 Spico_0630 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411240.1 729818 R 760011 CDS YP_004411241.1 330836600 10494926 730534..730800 1 NC_015436.1 COGs: COG0234 Co-chaperonin GroES (HSP10); HAMAP: Chaperonin Cpn10; InterPro IPR020818; KEGG: sta:STHERM_c05480 hypothetical protein; PFAM: Chaperonin Cpn10; SMART: Chaperonin Cpn10; SPTR: uncharacterized protein; IMG reference gene:2503956915; PFAM: Chaperonin 10 Kd subunit; molecular chaperone GroES 730800 10494926 Spico_0631 Sphaerochaeta coccoides DSM 17374 molecular chaperone GroES YP_004411241.1 730534 D 760011 CDS YP_004411242.1 330836601 10494927 complement(730914..733019) 1 NC_015436.1 COGs: COG1199 Rad3-related DNA helicase; InterPro IPR006555; KEGG: ssm:Spirs_1712 helicase C2; SMART: Helicase, ATP-dependent, c2 type; SPTR: uncharacterized protein; IMG reference gene:2503956916; helicase c2 733019 10494927 Spico_0632 Sphaerochaeta coccoides DSM 17374 helicase c2 YP_004411242.1 730914 R 760011 CDS YP_004411243.1 330836602 10494928 complement(733006..734367) 1 NC_015436.1 COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR002078:IPR002197:IPR003593; KEGG: ssm:Spirs_1709 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver domain; ATPase, AAA+ type, core; SPTR: Transcriptional regulatory protein; IMG reference gene:2503956917; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; Fis family transcriptional regulator 734367 10494928 Spico_0633 Sphaerochaeta coccoides DSM 17374 Fis family transcriptional regulator YP_004411243.1 733006 R 760011 CDS YP_004411244.1 330836603 10494929 complement(734342..735598) 1 NC_015436.1 COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: ssm:Spirs_1708 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: sensory transduction histidine kinase; IMG reference gene:2503956918; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; histidine kinase 735598 10494929 Spico_0634 Sphaerochaeta coccoides DSM 17374 histidine kinase YP_004411244.1 734342 R 760011 CDS YP_004411245.1 330836604 10494930 complement(735591..736778) 1 NC_015436.1 COGs: COG2812 DNA polymerase III gamma/tau subunits; KEGG: ssm:Spirs_1707 DNA polymerase III gamma/tau subunits; SPTR: DNA polymerase III domain protein; IMG reference gene:2503956919; hypothetical protein 736778 10494930 Spico_0635 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411245.1 735591 R 760011 CDS YP_004411246.1 330836605 10494931 complement(736802..736960) 1 NC_015436.1 KEGG: ppy:PPE_00816 adenine specific DNA methylase Mod; SPTR: uncharacterized protein; IMG reference gene:2503956920; adenine-specific DNA methylase 736960 10494931 Spico_0636 Sphaerochaeta coccoides DSM 17374 adenine-specific DNA methylase YP_004411246.1 736802 R 760011 CDS YP_004411247.1 330836606 10494932 complement(736970..737461) 1 NC_015436.1 InterPro IPR003825; KEGG: tde:TDE1973 CvpA family protein; PFAM: Colicin V production, CvpA; SPTR: CvpA family protein; IMG reference gene:2503956921; PFAM: Colicin V production protein; colicin V production protein 737461 10494932 Spico_0637 Sphaerochaeta coccoides DSM 17374 colicin V production protein YP_004411247.1 736970 R 760011 CDS YP_004411248.1 330836607 10494933 complement(737464..738576) 1 NC_015436.1 COGs: COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; HAMAP: N-acetylglucosaminyltransferase, MurG; InterPro IPR004276:IPR007235:IPR006009; KEGG: sta:STHERM_c05390 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide)pyrophosphory l-undecaprenol N-acetylglucosamine transferase; PFAM: Glycosyl transferase, family 28; Glycosyl transferase, family 28, C-terminal; PRIAM: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; SPTR: UDP-N-acetylglucosamine--N-acetylmuramyl- (Pentapeptide)pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; TIGRFAM: N-acetylglucosaminyltransferase, MurG; IMG reference gene:2503956922; PFAM: Glycosyltransferase 28 N-terminal domain; Glycosyltransferase 28 C-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase 738576 10494933 Spico_0638 Sphaerochaeta coccoides DSM 17374 UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase YP_004411248.1 737464 R 760011 CDS YP_004411249.1 330836608 10494934 738748..741516 1 NC_015436.1 COGs: COG0653 Preprotein translocase subunit SecA (ATPase RNA helicase); HAMAP: SecA protein; InterProIPR011115:IPR011130:IPR011116:IPR004027:IPR 000185; KEGG: ssm:Spirs_2625 preprotein translocase, SecA subunit; PFAM: SecA DEAD-like, N-terminal; SecA preprotein, cross-linking domain; SecA Wing/Scaffold; SEC-C motif; SMART: SecA DEAD-like, N-terminal; SecA preprotein, cross-linking domain; SPTR: Protein translocase subunit SecA; TIGRFAM: SecA protein; IMG reference gene:2503956923; PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SEC-C motif; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit; protein translocase subunit secA 741516 10494934 Spico_0639 Sphaerochaeta coccoides DSM 17374 protein translocase subunit secA YP_004411249.1 738748 D 760011 CDS YP_004411250.1 330836609 10494935 complement(741667..742803) 1 NC_015436.1 COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR018392:IPR016047:IPR002482; KEGG: bpo:BP951000_1905 LysM domain/M23/M37 peptidase domain-containing protein; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: LysM domain/M23/M37 peptidase domain protein; IMG reference gene:2503956924; PFAM: Peptidase M23; LysM domain; peptidase M23 742803 10494935 Spico_0640 Sphaerochaeta coccoides DSM 17374 peptidase M23 YP_004411250.1 741667 R 760011 CDS YP_004411251.1 330836610 10494936 742849..744528 1 NC_015436.1 COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR001460; KEGG: ssm:Spirs_2628 peptidoglycan glycosyltransferase; PFAM: Penicillin-binding protein, transpeptidase; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Penicillin-binding protein; IMG reference gene:2503956925; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; peptidoglycan glycosyltransferase 744528 10494936 Spico_0641 Sphaerochaeta coccoides DSM 17374 peptidoglycan glycosyltransferase YP_004411251.1 742849 D 760011 CDS YP_004411252.1 330836611 10494937 complement(744520..745710) 1 NC_015436.1 COGs: COG1419 Flagellar GTP-binding protein; InterPro IPR000897:IPR003593; KEGG: ssm:Spirs_1583 flagellar biosynthetic protein FlhF; PFAM: Signal recognition particle, SRP54 subunit, GTPase; SMART: Signal recognition particle, SRP54 subunit, GTPase; ATPase, AAA+ type, core; SPTR: Flagellar-associated GTP-binding protein; IMG reference gene:2503956926; PFAM: SRP54-type protein, GTPase domain; GTP-binding signal recognition particle SRP54 G- domain-containing protein 745710 10494937 Spico_0642 Sphaerochaeta coccoides DSM 17374 GTP-binding signal recognition particle SRP54 G- domain-containing protein YP_004411252.1 744520 R 760011 CDS YP_004411253.1 330836612 10494938 complement(745742..747148) 1 NC_015436.1 COGs: COG1220 ATP-dependent protease HslVU (ClpYQ) ATPase subunit; InterPro IPR013093:IPR003593:IPR004491; KEGG: tde:TDE1211 ATP-dependent protease ATP-binding subunit HslU; PFAM: ATPase, AAA-2; SMART: ATPase, AAA+ type, core; SPTR: ATP-dependent protease ATPase subunit HslU; TIGRFAM: Heat shock protein HslU; IMG reference gene:2503956927; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; AAA domain (dynein-related subfamily); TIGRFAM: ATP-dependent protease HslVU, ATPase subunit; heat shock protein HslVU, ATPase subunit HslU 747148 10494938 Spico_0643 Sphaerochaeta coccoides DSM 17374 heat shock protein HslVU, ATPase subunit HslU YP_004411253.1 745742 R 760011 CDS YP_004411254.1 330836613 10494939 complement(747152..747685) 1 NC_015436.1 COGs: COG5405 ATP-dependent protease HslVU (ClpYQ) peptidase subunit; HAMAP: ATP-dependent protease, HslV subunit; InterPro IPR001353:IPR022281; KEGG: sta:STHERM_c09050 ATP-dependent protease HslV; PFAM: Proteasome, subunit alpha/beta; SPTR: ATP-dependent protease HslV; TIGRFAM: ATP-dependent protease, HslV subunit; IMG reference gene:2503956928; PFAM: Proteasome subunit; TIGRFAM: ATP-dependent protease HslVU, peptidase subunit; ATP-dependent protease hslV 747685 10494939 Spico_0644 Sphaerochaeta coccoides DSM 17374 ATP-dependent protease hslV YP_004411254.1 747152 R 760011 CDS YP_004411255.1 330836614 10494940 complement(747682..748614) 1 NC_015436.1 COGs: COG4974 Site-specific recombinase XerD; HAMAP: Tyrosine recombinase xerC; InterPro IPR004107:IPR002104; KEGG: toc:Toce_1087 tyrosine recombinase XerC; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; SPTR: Tyrosine recombinase XerC; IMG reference gene:2503956929; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase; tyrosine recombinase XerC 748614 10494940 Spico_0645 Sphaerochaeta coccoides DSM 17374 tyrosine recombinase XerC YP_004411255.1 747682 R 760011 CDS YP_004411256.1 330836615 10494941 complement(748621..749451) 1 NC_015436.1 COGs: COG0758 Rossmann fold nucleotide-binding protein involved in DNA uptake; KEGG: sta:STHERM_c09020 DNA processing protein DprA; SPTR: Smf protein; IMG reference gene:2503956930; PFAM: DNA recombination-mediator protein A; hypothetical protein 749451 10494941 Spico_0646 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411256.1 748621 R 760011 CDS YP_004411257.1 330836616 10494942 complement(749678..750607) 1 NC_015436.1 COGs: COG4974 Site-specific recombinase XerD; HAMAP: Tyrosine recombinase xerC; InterPro IPR004107:IPR002104; KEGG: ssm:Spirs_1553 tyrosine recombinase XerD; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; SPTR: DNA integration/recombination/invertion protein; IMG reference gene:2503956931; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase; tyrosine recombinase XerC 750607 10494942 Spico_0647 Sphaerochaeta coccoides DSM 17374 tyrosine recombinase XerC YP_004411257.1 749678 R 760011 CDS YP_004411258.1 330836617 10494943 complement(750611..751882) 1 NC_015436.1 COGs: COG0206 Cell division GTPase; InterPro IPR003008:IPR018316:IPR000158; KEGG: ssm:Spirs_1552 cell division protein FtsZ; PFAM: Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer sandwich domain; SMART: Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer sandwich domain; SPTR: Cell division protein FtsZ; TIGRFAM: Cell division protein FtsZ, N-terminal; IMG reference gene:2503956932; PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ; cell division protein FtsZ 751882 10494943 Spico_0648 Sphaerochaeta coccoides DSM 17374 cell division protein FtsZ YP_004411258.1 750611 R 760011 CDS YP_004411259.1 330836618 10494944 complement(751932..753182) 1 NC_015436.1 COGs: COG0849 Actin-like ATPase involved in cell division; InterPro IPR003494:IPR020823; KEGG: ssm:Spirs_1551 cell division protein FtsA; PFAM: Cell division protein FtsA domain; SMART: Cell division protein FtsA domain; SPTR: Cell division protein FtsA; TIGRFAM: Cell division protein family FtsA; IMG reference gene:2503956933; PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA; cell division protein FtsA 753182 10494944 Spico_0649 Sphaerochaeta coccoides DSM 17374 cell division protein FtsA YP_004411259.1 751932 R 760011 CDS YP_004411260.1 330836619 10494945 complement(753182..754021) 1 NC_015436.1 InterPro IPR013685; KEGG: dma:DMR_33240 cell division protein FtsQ; PFAM: Polypeptide-transport-associated, FtsQ-type; SPTR: cell division protein FtsQ; IMG reference gene:2503956934; PFAM: POTRA domain, FtsQ-type; cell division protein FtsQ 754021 10494945 Spico_0650 Sphaerochaeta coccoides DSM 17374 cell division protein FtsQ YP_004411260.1 753182 R 760011 CDS YP_004411261.1 330836620 10494946 complement(754014..755399) 1 NC_015436.1 COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182; KEGG: sta:STHERM_c08960 hypothetical protein; PFAM: Cell cycle protein; SPTR: uncharacterized protein; IMG reference gene:2503956935; PFAM: Cell cycle protein; cell cycle protein 755399 10494946 Spico_0651 Sphaerochaeta coccoides DSM 17374 cell cycle protein YP_004411261.1 754014 R 760011 CDS YP_004411262.1 330836621 10494947 complement(755425..756489) 1 NC_015436.1 COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; HAMAP: Phospho-N-acetylmuramoyl-pentapeptide transferase; InterPro IPR018480:IPR000715:IPR003524; KEGG: ssm:Spirs_1548 phospho-N-acetylmuramoyl-pentapeptide-transferas E; PFAM: Glycosyl transferase, family 4; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; SPTR:Phospho-N-acetylmuramoyl-pentapeptide-transfer ase; IMG reference gene:2503956936; PFAM: Glycosyl transferase 4; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; Phospho-N-acetylmuramoyl-pentapeptide- transferase 756489 10494947 Spico_0652 Sphaerochaeta coccoides DSM 17374 Phospho-N-acetylmuramoyl-pentapeptide- transferase YP_004411262.1 755425 R 760011 CDS YP_004411263.1 330836622 10494948 complement(756477..757910) 1 NC_015436.1 COGs: COG0770 UDP-N-acetylmuramyl pentapeptide synthase; InterPro IPR000713:IPR013221:IPR005863; KEGG: ssm:Spirs_1547 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; PRIAM:UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-a lanineligase; SPTR:UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-al anineligase; TIGRFAM: UDP-MurNAc-pentapeptide synthetase; IMG reference gene:2503956937; PFAM: Mur ligase, glutamate ligase domain; Mur ligase, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase 757910 10494948 Spico_0653 Sphaerochaeta coccoides DSM 17374 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase YP_004411263.1 756477 R 760011 CDS YP_004411264.1 330836623 10494949 complement(757919..758335) 1 NC_015436.1 KEGG: cdi:DIP2252 integral membrane protein; SPTR: conserved integral membrane protein; IMG reference gene:2503956938; TIGRFAM: cell division protein FtsL; hypothetical protein 758335 10494949 Spico_0654 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411264.1 757919 R 760011 CDS YP_004411265.1 330836624 10494950 complement(758328..759272) 1 NC_015436.1 COGs: COG0275 S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; HAMAP: S-adenosyl-L-methionine-dependent methyltransferase, MraW; InterPro IPR002903; KEGG: tde:TDE1198 S-adenosyl-methyltransferase MraW; PFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; SPTR: Ribosomal RNA small subunit methyltransferase H; TIGRFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; IMG reference gene:2503956939; PFAM: MraW methylase; TIGRFAM: S-adenosyl-methyltransferase MraW; Ribosomal RNA small subunit methyltransferase H 759272 10494950 Spico_0655 Sphaerochaeta coccoides DSM 17374 Ribosomal RNA small subunit methyltransferase H YP_004411265.1 758328 R 760011 CDS YP_004411266.1 330836625 10494951 complement(759269..759739) 1 NC_015436.1 COGs: COG2001 conserved hypothetical protein; HAMAP: MraZ; InterPro IPR020603:IPR003444; KEGG: ssm:Spirs_1544 MraZ protein; PFAM: MraZ domain; SPTR: Protein MraZ; TIGRFAM: MraZ; IMG reference gene:2503956940; PFAM: MraZ protein; TIGRFAM: mraZ protein; protein mraZ 759739 10494951 Spico_0656 Sphaerochaeta coccoides DSM 17374 protein mraZ YP_004411266.1 759269 R 760011 CDS YP_004411267.1 330836626 10494952 complement(760067..761665) 1 NC_015436.1 COGs: COG1543 conserved hypothetical protein; InterPro IPR004300:IPR015293; KEGG: ssm:Spirs_1542 domain of unknown function DUF1957; PFAM: Domain of unknown function DUF1957; Glycoside hydrolase, family 57, N-terminal; SPTR: uncharacterized protein; IMG reference gene:2503956941; PFAM: Domain of unknown function (DUF1957); Glycosyl hydrolase 57; 1,4-alpha-glucan-branching protein 761665 10494952 Spico_0657 Sphaerochaeta coccoides DSM 17374 1,4-alpha-glucan-branching protein YP_004411267.1 760067 R 760011 CDS YP_004411268.1 330836627 10494953 complement(761662..762405) 1 NC_015436.1 KEGG: sta:STHERM_c08890 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956942; hypothetical protein 762405 10494953 Spico_0658 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411268.1 761662 R 760011 CDS YP_004411269.1 330836628 10494954 762606..764963 1 NC_015436.1 InterPro IPR004300; KEGG: ssm:Spirs_1540 glycoside hydrolase 57; PFAM: Glycoside hydrolase, family 57, N-terminal; SPTR: Glycoside hydrolase, family 57; IMG reference gene:2503956943; PFAM: Glycosyl hydrolase 57; Domain of unknown function (DUF3536); glycoside hydrolase 57 764963 10494954 Spico_0659 Sphaerochaeta coccoides DSM 17374 glycoside hydrolase 57 YP_004411269.1 762606 D 760011 CDS YP_004411270.1 330836629 10494955 complement(764938..766632) 1 NC_015436.1 COGs: COG0497 ATPase involved in DNA repair; InterPro IPR003395:IPR003593:IPR004604; KEGG: sta:STHERM_c08840 DNA repair protein RecN; PFAM: RecF/RecN/SMC; SMART: ATPase, AAA+ type, core; SPTR: DNA repair protein RecN; TIGRFAM: DNA recombination/repair protein RecN; IMG reference gene:2503956944; PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN; DNA repair protein RecN 766632 10494955 Spico_0660 Sphaerochaeta coccoides DSM 17374 DNA repair protein RecN YP_004411270.1 764938 R 760011 CDS YP_004411271.1 330836630 10494956 complement(766625..767494) 1 NC_015436.1 COGs: COG0061 sugar kinase; HAMAP: Inorganic polyphosphate/ATP-NAD kinase, predicted; InterPro IPR002504; KEGG: ssm:Spirs_1534 ATP-NAD/AcoX kinase; PFAM: Inorganic polyphosphate/ATP-NAD kinase, predicted; SPTR: Probable inorganic polyphosphate/ATP-NAD kinase; IMG reference gene:2503956945; PFAM: ATP-NAD kinase; inorganic polyphosphate/ATP-NAD kinase 767494 10494956 Spico_0661 Sphaerochaeta coccoides DSM 17374 inorganic polyphosphate/ATP-NAD kinase YP_004411271.1 766625 R 760011 CDS YP_004411272.1 330836631 10494957 complement(767509..768549) 1 NC_015436.1 COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: ssm:Spirs_1533 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: Aminotransferase, DegT/DnrJ/EryC1/StrS family; IMG reference gene:2503956946; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 768549 10494957 Spico_0662 Sphaerochaeta coccoides DSM 17374 DegT/DnrJ/EryC1/StrS aminotransferase YP_004411272.1 767509 R 760011 CDS YP_004411273.1 330836632 10494962 774381..774947 1 NC_015436.1 COGs: COG0450 Peroxiredoxin; InterPro IPR000866:IPR017559; KEGG: lbf:LBF_2905 peroxiredoxin; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; PRIAM: Peroxiredoxin; SPTR: Peroxiredoxin; TIGRFAM: Peroxiredoxin; IMG reference gene:2503956951; PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; TIGRFAM: peroxiredoxin; peroxiredoxin 774947 10494962 Spico_0663 Sphaerochaeta coccoides DSM 17374 peroxiredoxin YP_004411273.1 774381 D 760011 CDS YP_004411274.1 330836633 10494963 775134..776699 1 NC_015436.1 COGs: COG0606 ATPase with chaperone activity; InterPro IPR000523:IPR003593; KEGG: sta:STHERM_c05260 hypothetical protein; PFAM: Magnesium chelatase, ChlI subunit; SMART: ATPase, AAA+ type, core; SPTR: uncharacterized protein; IMG reference gene:2503956952; PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein; magnesium chelatase ChlI subunit 776699 10494963 Spico_0664 Sphaerochaeta coccoides DSM 17374 magnesium chelatase ChlI subunit YP_004411274.1 775134 D 760011 CDS YP_004411275.1 330836634 10494966 777664..778596 1 NC_015436.1 COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: ara:Arad_4624 sugar ABC transporter; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport system inner membrane component; IMG reference gene:2503956955; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 1 778596 10494966 Spico_0667 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter membrane protein 1 YP_004411275.1 777664 D 760011 CDS YP_004411276.1 330836635 10494967 778600..779448 1 NC_015436.1 COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: kfl:Kfla_2100 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport system inner membrane component; IMG reference gene:2503956956; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 2 779448 10494967 Spico_0668 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter membrane protein 2 YP_004411276.1 778600 D 760011 CDS YP_004411277.1 330836636 10494968 779481..780773 1 NC_015436.1 COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: ach:Achl_3128 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein family 1; IMG reference gene:2503956957; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein 780773 10494968 Spico_0669 Sphaerochaeta coccoides DSM 17374 ABC transporter substrate-binding protein YP_004411277.1 779481 D 760011 CDS YP_004411278.1 330836637 10494969 780914..783034 1 NC_015436.1 KEGG: cpy:Cphy_3399 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956958; hypothetical protein 783034 10494969 Spico_0670 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411278.1 780914 D 760011 CDS YP_004411279.1 330836638 10494970 783089..784627 1 NC_015436.1 COGs: COG3507 Beta-xylosidase; InterPro IPR006710; KEGG: cpy:Cphy_3398 glycoside hydrolase; PFAM: Glycoside hydrolase, family 43; PRIAM: Xylan 1,4-beta-xylosidase; SPTR: Glycoside hydrolase 43; IMG reference gene:2503956959; PFAM: Glycosyl hydrolases family 43; xylan 1,4-beta-xylosidase 784627 10494970 Spico_0671 Sphaerochaeta coccoides DSM 17374 xylan 1,4-beta-xylosidase YP_004411279.1 783089 D 760011 CDS YP_004411280.1 330836639 10494973 785312..787483 1 NC_015436.1 COGs: COG2217 Cation transport ATPase; InterProIPR006121:IPR008250:IPR005834:IPR006404:IPR 006416:IPR001757; KEGG: efa:EF1400 cadmium-translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; PRIAM: Cadmium-exporting ATPase; SPTR: Cadmium-translocating P-type ATPase; TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; IMG reference gene:2503956962; PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; heavy metal translocating P-type ATPase 787483 10494973 Spico_0672 Sphaerochaeta coccoides DSM 17374 heavy metal translocating P-type ATPase YP_004411280.1 785312 D 760011 CDS YP_004411281.1 330836640 10494974 787822..789834 1 NC_015436.1 COGs: COG0480 Translation elongation factors (GTPase); InterProIPR000795:IPR004161:IPR005517:IPR000640:IPR 005225:IPR004540; KEGG: ssm:Spirs_2534 translation elongation factor G; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; SMART: Translation elongation factor EFG/EF2, C-terminal; Translation elongation factor EFG/EF2, domain IV; SPTR: Elongation factor G 1; TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; IMG reference gene:2503956963; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; translation elongation factor 2 (EF-2/EF-G) 789834 10494974 Spico_0673 Sphaerochaeta coccoides DSM 17374 translation elongation factor 2 (EF-2/EF-G) YP_004411281.1 787822 D 760011 CDS YP_004411282.1 330836641 10494975 790046..792127 1 NC_015436.1 COGs: COG0480 Translation elongation factors (GTPase); InterPro IPR000795:IPR005517:IPR000640:IPR005225; KEGG: ssm:Spirs_2536 small GTP-binding protein; PFAM: Translation elongation factor EFG/EF2, domain IV; Protein synthesis factor, GTP-binding; Translation elongation factor EFG/EF2, C-terminal; SMART: Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; SPTR: translation elongation factor G; TIGRFAM: Small GTP-binding protein; IMG reference gene:2503956964; PFAM: Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; translation elongation factor 2 (EF-2/EF-G) 792127 10494975 Spico_0674 Sphaerochaeta coccoides DSM 17374 translation elongation factor 2 (EF-2/EF-G) YP_004411282.1 790046 D 760011 CDS YP_004411283.1 330836642 10494976 complement(792163..792918) 1 NC_015436.1 COGs: COG0220 S-adenosylmethionine-dependent methyltransferase; HAMAP: tRNA (guanine-N-7) methyltransferase; InterPro IPR003358; KEGG: tde:TDE1130 methyltransferase, PFAM: tRNA (guanine-N-7) methyltransferase; SPTR: tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N-7) methyltransferase; IMG reference gene:2503956965; PFAM: methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 792918 10494976 Spico_0675 Sphaerochaeta coccoides DSM 17374 tRNA (guanine-N(7)-)-methyltransferase YP_004411283.1 792163 R 760011 CDS YP_004411284.1 330836643 10494977 complement(792932..796210) 1 NC_015436.1 COGs: COG1197 Transcription-repair coupling factor (superfamily II helicase); InterProIPR003711:IPR011545:IPR001650:IPR005118:IPR 014001:IPR004576; KEGG: ssm:Spirs_2540 transcription-repair coupling factor; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Transcription factor CarD; Helicase, C-terminal; Transcription-repair-coupling factor domain; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: Transcription-repair coupling factor; TIGRFAM: Transcription-repair coupling factor; IMG reference gene:2503956966; PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd); transcription-repair coupling factor 796210 10494977 Spico_0676 Sphaerochaeta coccoides DSM 17374 transcription-repair coupling factor YP_004411284.1 792932 R 760011 CDS YP_004411285.1 330836644 10494978 796244..797062 1 NC_015436.1 COGs: COG0483 fructose-1 6-bisphosphatase of inositol monophosphatase; InterPro IPR000760; KEGG: ssm:Spirs_3133 inositol monophosphatase; PFAM: Inositol monophosphatase; SPTR: Inositol monophosphatase; IMG reference gene:2503956967; PFAM: Inositol monophosphatase; inositol monophosphatase 797062 10494978 Spico_0677 Sphaerochaeta coccoides DSM 17374 inositol monophosphatase YP_004411285.1 796244 D 760011 CDS YP_004411286.1 330836645 10494979 complement(797158..797892) 1 NC_015436.1 COGs: COG1738 conserved hypothetical protein; InterPro IPR003744; KEGG: ssm:Spirs_3136 hypothetical protein; PFAM: Protein of unknown function DUF165; SPTR: uncharacterized protein; TIGRFAM: Protein of unknown function DUF165; IMG reference gene:2503956968; PFAM: Uncharacterized ACR, YhhQ family COG1738; TIGRFAM: conserved hypothetical integral membrane protein; hypothetical protein 797892 10494979 Spico_0678 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411286.1 797158 R 760011 CDS YP_004411287.1 330836646 10494980 complement(798011..798667) 1 NC_015436.1 KEGG: ssm:Spirs_1463 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956969; hypothetical protein 798667 10494980 Spico_0679 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411287.1 798011 R 760011 CDS YP_004411288.1 330836647 10494981 798965..799453 1 NC_015436.1 COGs: COG1327 transcriptional regulator protein consists of a Zn-ribbon and ATP-cone domains; HAMAP: Ribonucleotide reductase regulator NrdR-like; InterPro IPR005144:IPR003796; KEGG: ssm:Spirs_1455 ATP-cone domain protein; PFAM: ATP-cone; SPTR: Transcriptional repressor NrdR; TIGRFAM: Ribonucleotide reductase regulator NrdR-like; IMG reference gene:2503956970; PFAM: ATP cone domain; TIGRFAM: transcriptional regulator NrdR; NrdR family transcriptional regulator 799453 10494981 Spico_0680 Sphaerochaeta coccoides DSM 17374 NrdR family transcriptional regulator YP_004411288.1 798965 D 760011 CDS YP_004411289.1 330836648 10494982 complement(799478..800632) 1 NC_015436.1 COGs: COG0232 dGTP triphosphohydrolase; InterPro IPR006674:IPR003607; KEGG: ssm:Spirs_1451 metal-dependent phosphohydrolase HD sub domain protein; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: Deoxyguanosinetriphosphate triphosphohydrolase-like protein; IMG reference gene:2503956971; PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; metal-dependent phosphohydrolase HD sub domain-containing protein 800632 10494982 Spico_0681 Sphaerochaeta coccoides DSM 17374 metal-dependent phosphohydrolase HD sub domain-containing protein YP_004411289.1 799478 R 760011 CDS YP_004411290.1 330836649 10494983 800702..801145 1 NC_015436.1 KEGG: ath:AT3G44920 ATCHX11; monovalent cation:proton antiporter/ sodium:hydrogen antiporter; SPTR: Cation/H(+) antiporter 11; IMG reference gene:2503956972; hypothetical protein 801145 10494983 Spico_0682 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411290.1 800702 D 760011 CDS YP_004411291.1 330836650 10494984 801169..801753 1 NC_015436.1 COGs: COG0703 Shikimate kinase; HAMAP: Shikimate kinase; InterPro IPR000623; KEGG: sta:STHERM_c05910 shikimate kinase; PFAM: Shikimate kinase; SPTR: Shikimate kinase; IMG reference gene:2503956973; PFAM: Shikimate kinase; shikimate kinase 801753 10494984 Spico_0683 Sphaerochaeta coccoides DSM 17374 shikimate kinase YP_004411291.1 801169 D 760011 CDS YP_004411292.1 330836651 10494985 801750..802841 1 NC_015436.1 COGs: COG0082 Chorismate synthase; InterPro IPR000453; KEGG: sta:STHERM_c05920 chorismate synthase; PFAM: Chorismate synthase; PRIAM: Chorismate synthase; SPTR: Chorismate synthase; TIGRFAM: Chorismate synthase; IMG reference gene:2503956974; PFAM: Chorismate synthase; TIGRFAM: chorismate synthase; chorismate synthase 802841 10494985 Spico_0684 Sphaerochaeta coccoides DSM 17374 chorismate synthase YP_004411292.1 801750 D 760011 CDS YP_004411293.1 330836652 10494986 802838..804505 1 NC_015436.1 COGs: COG1061 DNA or RNA helicase of superfamily II; InterPro IPR006935:IPR001650:IPR014001; KEGG: ssm:Spirs_2851 helicase domain protein; PFAM: Helicase, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: Helicase domain protein; IMG reference gene:2503956975; PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; helicase 804505 10494986 Spico_0685 Sphaerochaeta coccoides DSM 17374 helicase YP_004411293.1 802838 D 760011 CDS YP_004411294.1 330836653 10494987 804502..806565 1 NC_015436.1 KEGG: ssm:Spirs_2852 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956976; hypothetical protein 806565 10494987 Spico_0686 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411294.1 804502 D 760011 CDS YP_004411295.1 330836654 10494988 complement(806640..808097) 1 NC_015436.1 COGs: COG0169 Shikimate 5-dehydrogenase; HAMAP: Dehydroquinase class I; Shikimate, quinate/shikimate dehydrogenase; InterProIPR001381:IPR013708:IPR006151:IPR022893:IPR 011342; KEGG: sta:STHERM_c02970 3-dehydroquinate dehydratase, type 1; PFAM: Dehydroquinase class I; Shikimate dehydrogenase substrate binding, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; PRIAM: 3-dehydroquinate dehydratase., Shikimate dehydrogenase; SPTR: 3-dehydroquinate dehydratase, type 1; TIGRFAM: Shikimate dehydrogenase; Dehydroquinase class I; IMG reference gene:2503956977; PFAM: Shikimate dehydrogenase substrate binding domain; Type I 3-dehydroquinase; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; 3-dehydroquinate dehydratase, type I; 3-dehydroquinate dehydratase 808097 10494988 Spico_0687 Sphaerochaeta coccoides DSM 17374 3-dehydroquinate dehydratase YP_004411295.1 806640 R 760011 CDS YP_004411296.1 330836655 10494989 808298..810247 1 NC_015436.1 COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003439:IPR003593; KEGG: ssm:Spirs_2861 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; IMG reference gene:2503956978; PFAM: ABC transporter; ABC transporter 810247 10494989 Spico_0688 Sphaerochaeta coccoides DSM 17374 ABC transporter YP_004411296.1 808298 D 760011 CDS YP_004411297.1 330836656 10494990 810237..810917 1 NC_015436.1 COGs: COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; HAMAP: Maf-like protein; InterPro IPR003697; KEGG: pth:PTH_0815 nucleotide-binding protein; PFAM: Maf-like protein; SPTR: Maf-like protein COLAER_00364; TIGRFAM: Maf-like protein; IMG reference gene:2503956979; PFAM: Maf-like protein; TIGRFAM: MAF protein; Septum formation protein Maf 810917 10494990 Spico_0689 Sphaerochaeta coccoides DSM 17374 Septum formation protein Maf YP_004411297.1 810237 D 760011 CDS YP_004411298.1 330836657 10494991 810973..811953 1 NC_015436.1 COGs: COG0052 Ribosomal protein S2; InterPro IPR001865:IPR005706; KEGG: ssm:Spirs_2864 ribosomal protein S2; PFAM: Ribosomal protein S2; SPTR: 30S ribosomal protein S2; TIGRFAM: Ribosomal protein S2, bacteria/mitochondria/plastid; IMG reference gene:2503956980; PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; 30S ribosomal protein S2 811953 10494991 Spico_0690 Sphaerochaeta coccoides DSM 17374 30S ribosomal protein S2 YP_004411298.1 810973 D 760011 CDS YP_004411299.1 330836658 10494992 811972..812817 1 NC_015436.1 COGs: COG0264 Translation elongation factor Ts; HAMAP: Translation elongation factor EFTs/EF1B; InterPro IPR000449:IPR014039:IPR001816; KEGG: ssm:Spirs_2865 translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B, dimerisation; Ubiquitin-associated/translation elongation factor EF1B, N-terminal; SPTR: Elongation factor Ts; TIGRFAM: Translation elongation factor EFTs/EF1B; IMG reference gene:2503956981; PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts; elongation factor Ts 812817 10494992 Spico_0691 Sphaerochaeta coccoides DSM 17374 elongation factor Ts YP_004411299.1 811972 D 760011 CDS YP_004411300.1 330836659 10494993 812861..813427 1 NC_015436.1 COGs: COG0233 Ribosome recycling factor; HAMAP: Ribosome recycling factor, bacterial-like; InterPro IPR002661:IPR015998; KEGG: ssm:Spirs_2866 ribosome recycling factor; PFAM: Ribosome recycling factor; SPTR: Ribosome-recycling factor; TIGRFAM: Ribosome recycling factor; IMG reference gene:2503956982; PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor; ribosome recycling factor 813427 10494993 Spico_0692 Sphaerochaeta coccoides DSM 17374 ribosome recycling factor YP_004411300.1 812861 D 760011 CDS YP_004411301.1 330836660 10494994 813429..814148 1 NC_015436.1 COGs: COG0020 Undecaprenyl pyrophosphate synthase; HAMAP:Di-trans-poly-cis-decaprenylcistransferase-li ke; InterPro IPR001441; KEGG: sta:STHERM_c13090 undecaprenyl pyrophosphate synthetase; PFAM:Di-trans-poly-cis-decaprenylcistransferase-lik e; PRIAM: Di-trans,poly-cis-decaprenylcistransferase; SPTR: Undecaprenyl pyrophosphate synthetase; TIGRFAM:Di-trans-poly-cis-decaprenylcistransferase- like; IMG reference gene:2503956983; PFAM: undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; UDP pyrophosphate synthetase 814148 10494994 Spico_0693 Sphaerochaeta coccoides DSM 17374 UDP pyrophosphate synthetase YP_004411301.1 813429 D 760011 CDS YP_004411302.1 330836661 10494995 814145..814996 1 NC_015436.1 COGs: COG4589 CDP-diglyceride synthetase/phosphatidate cytidylyltransferase; InterPro IPR000374; KEGG: tde:TDE2343 phosphatidate cytidylyltransferase; PFAM: Phosphatidate cytidylyltransferase; SPTR: Phosphatidate cytidylyltransferase; IMG reference gene:2503956984; PFAM: Cytidylyltransferase; phosphatidate cytidylyltransferase 814996 10494995 Spico_0694 Sphaerochaeta coccoides DSM 17374 phosphatidate cytidylyltransferase YP_004411302.1 814145 D 760011 CDS YP_004411303.1 330836662 10494996 815010..816182 1 NC_015436.1 COGs: COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase; HAMAP: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro IPR013512:IPR013644:IPR003821; KEGG: sta:STHERM_c13110 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal; 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal; PRIAM: 1-deoxy-D-xylulose-5-phosphate reductoisomerase; SPTR: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; IMG reference gene:2503956985; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 816182 10494996 Spico_0695 Sphaerochaeta coccoides DSM 17374 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_004411303.1 815010 D 760011 CDS YP_004411304.1 330836663 10494997 816182..817582 1 NC_015436.1 COGs: COG0750 membrane-associated Zn-dependent protease 1; InterPro IPR008915; KEGG: ssm:Spirs_2870 membrane-associated zinc metalloprotease; PFAM: Peptidase M50; SPTR: uncharacterized protein; IMG reference gene:2503956986; PFAM: Peptidase M50; TIGRFAM: RIP metalloprotease RseP; peptidase M50 817582 10494997 Spico_0696 Sphaerochaeta coccoides DSM 17374 peptidase M50 YP_004411304.1 816182 D 760011 CDS YP_004411305.1 330836664 10494998 complement(817590..818960) 1 NC_015436.1 COGs: COG0305 Replicative DNA helicase; InterPro IPR007693:IPR007694:IPR003593:IPR007692; KEGG: ssm:Spirs_2874 replicative DNA helicase; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal; SMART: ATPase, AAA+ type, core; SPTR: uncharacterized protein; TIGRFAM: DNA helicase, DnaB type; IMG reference gene:2503956987; PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase; replicative DNA helicase 818960 10494998 Spico_0697 Sphaerochaeta coccoides DSM 17374 replicative DNA helicase YP_004411305.1 817590 R 760011 CDS YP_004411306.1 330836665 10494999 complement(818964..819632) 1 NC_015436.1 COGs: COG0359 Ribosomal protein L9; HAMAP: Ribosomal protein L9, bacteria/chloroplast; InterPro IPR020070:IPR020069:IPR020594; KEGG: ssm:Spirs_2875 ribosomal protein L9; PFAM: Ribosomal protein L9, N-terminal; Ribosomal protein L9, C-terminal; SPTR: 50S ribosomal protein L9; TIGRFAM: Ribosomal protein L9, bacteria/chloroplast; IMG reference gene:2503956988; PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9; 50S ribosomal protein L9 819632 10494999 Spico_0698 Sphaerochaeta coccoides DSM 17374 50S ribosomal protein L9 YP_004411306.1 818964 R 760011 CDS YP_004411307.1 330836666 10495000 complement(819616..820590) 1 NC_015436.1 KEGG: sta:STHERM_c13160 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956989; hypothetical protein 820590 10495000 Spico_0699 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411307.1 819616 R 760011 CDS YP_004411308.1 330836667 10495001 complement(820635..820922) 1 NC_015436.1 COGs: COG0238 Ribosomal protein S18; HAMAP: Ribosomal protein S18; InterPro IPR001648; KEGG: ssm:Spirs_2877 ribosomal protein S18; PFAM: Ribosomal protein S18; SPTR: 30S ribosomal protein S18; TIGRFAM: Ribosomal protein S18; IMG reference gene:2503956990; PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18; 30S ribosomal protein S18 820922 10495001 Spico_0700 Sphaerochaeta coccoides DSM 17374 30S ribosomal protein S18 YP_004411308.1 820635 R 760011 CDS YP_004411309.1 330836668 10495002 complement(820967..821452) 1 NC_015436.1 COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR000424:IPR011344; KEGG: ssm:Spirs_2878 single-strand binding protein; PFAM: Primosome PriB/single-strand DNA-binding; SPTR: Single-stranded DNA-binding protein; TIGRFAM: Single-strand DNA-binding; IMG reference gene:2503956991; PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); single-strand binding protein 821452 10495002 Spico_0701 Sphaerochaeta coccoides DSM 17374 single-strand binding protein YP_004411309.1 820967 R 760011 CDS YP_004411310.1 330836669 10495003 complement(821465..821767) 1 NC_015436.1 COGs: COG0360 Ribosomal protein S6; HAMAP: Ribosomal protein S6, plastid/chloroplast; InterPro IPR000529:IPR020814; KEGG: ssm:Spirs_2879 ribosomal protein S6; PFAM: Ribosomal protein S6; SPTR: 30S ribosomal protein S6; TIGRFAM: Ribosomal protein S6; IMG reference gene:2503956992; PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6; 30S ribosomal protein S6 821767 10495003 Spico_0702 Sphaerochaeta coccoides DSM 17374 30S ribosomal protein S6 YP_004411310.1 821465 R 760011 CDS YP_004411311.1 330836670 10495004 822214..823599 1 NC_015436.1 COGs: COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase; InterPro IPR013221:IPR004101:IPR005762; KEGG: sta:STHERM_c03310 UDP-N-acetylmuramoylalanine--D-glutamate ligase; PFAM: Mur ligase, central; Mur ligase, C-terminal; PRIAM: UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; SPTR: UDP-N-acetylmuramoylalanine--D-glutamate ligase; TIGRFAM: UDP-N-acetylmuramoylalanine-D-glutamate ligase; manually curated; IMG reference gene:2503956993; PFAM: Mur ligase middle domain; UDP-N-acetylmuramoylalanine--D-glutamate ligase 823599 10495004 Spico_0703 Sphaerochaeta coccoides DSM 17374 UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_004411311.1 822214 D 760011 CDS YP_004411312.1 330836671 10495005 complement(823576..824595) 1 NC_015436.1 COGs: COG2348 Uncharacterized protein involved in methicillin resistance; InterPro IPR003447; KEGG: ssm:Spirs_2888 methicillin resistance protein; PFAM: Methicillin resistance protein; SPTR: FemAB family protein; IMG reference gene:2503956994; PFAM: FemAB family; methicillin resistance protein 824595 10495005 Spico_0704 Sphaerochaeta coccoides DSM 17374 methicillin resistance protein YP_004411312.1 823576 R 760011 CDS YP_004411313.1 330836672 10495006 complement(824614..826860) 1 NC_015436.1 COGs: COG0143 Methionyl-tRNA synthetase; HAMAP: Methionyl-tRNA synthetase; InterPro IPR015413:IPR002547:IPR014758; KEGG: ssm:Spirs_2889 methionyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class I (M); tRNA-binding domain; PRIAM: Methionine--tRNA ligase; SPTR: Methionyl-tRNA synthetase; TIGRFAM: Methionyl-tRNA synthetase, class Ia; IMG reference gene:2503956995; PFAM: tRNA synthetases class I (M); Anticodon-binding domain; tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; methionyl-tRNA synthetase; methionyl-tRNA synthetase 826860 10495006 Spico_0705 Sphaerochaeta coccoides DSM 17374 methionyl-tRNA synthetase YP_004411313.1 824614 R 760011 CDS YP_004411314.1 330836673 10495007 827045..828040 1 NC_015436.1 COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107:IPR010201; KEGG: sta:STHERM_c16310 hypothetical protein; PFAM: Band 7 protein; SMART: Band 7 protein; SPTR: uncharacterized protein; TIGRFAM: HflK; IMG reference gene:2503956996; PFAM: SPFH domain / Band 7 family; TIGRFAM: HflK protein; protease FtsH subunit HflK 828040 10495007 Spico_0706 Sphaerochaeta coccoides DSM 17374 protease FtsH subunit HflK YP_004411314.1 827045 D 760011 CDS YP_004411315.1 330836674 10495008 828040..829023 1 NC_015436.1 COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107:IPR010200; KEGG: ssm:Spirs_2891 HflC protein; PFAM: Band 7 protein; SMART: Band 7 protein; SPTR: HflC protein; TIGRFAM: HflC; IMG reference gene:2503956997; PFAM: SPFH domain / Band 7 family; TIGRFAM: HflC protein; HflC protein 829023 10495008 Spico_0707 Sphaerochaeta coccoides DSM 17374 HflC protein YP_004411315.1 828040 D 760011 CDS YP_004411316.1 330836675 10495009 829160..829501 1 NC_015436.1 KEGG: atu:Atu2463 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503956998; hypothetical protein 829501 10495009 Spico_0708 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411316.1 829160 D 760011 CDS YP_004411317.1 330836676 10495010 complement(829522..831225) 1 NC_015436.1 KEGG: clj:CLJU_c23260 hypothetical protein; SPTR: Uncharacterized membrane protein; IMG reference gene:2503956999; hypothetical protein 831225 10495010 Spico_0709 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411317.1 829522 R 760011 CDS YP_004411318.1 330836677 10495011 complement(831222..832052) 1 NC_015436.1 COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: kol:Kole_0152 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC superfamily ATP binding cassette transporter, ABC protein; IMG reference gene:2503957000; PFAM: ABC transporter; ABC transporter 832052 10495011 Spico_0710 Sphaerochaeta coccoides DSM 17374 ABC transporter YP_004411318.1 831222 R 760011 CDS YP_004411319.1 330836678 10495012 832325..833566 1 NC_015436.1 COGs: COG0137 Argininosuccinate synthase; HAMAP: Argininosuccinate synthase; InterPro IPR001518; KEGG: trq:TRQ2_1045 argininosuccinate synthase; PFAM: Argininosuccinate synthase; PRIAM: Argininosuccinate synthase; SPTR: Argininosuccinate synthase; TIGRFAM: Argininosuccinate synthase; IMG reference gene:2503957001; PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase; argininosuccinate synthase 833566 10495012 Spico_0711 Sphaerochaeta coccoides DSM 17374 argininosuccinate synthase YP_004411319.1 832325 D 760011 CDS YP_004411320.1 330836679 10495013 complement(833660..834031) 1 NC_015436.1 InterPro IPR001845; KEGG: clo:HMPREF0868_0433 transcriptional repressor SmtB family protein; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Transcriptional regulator, ArsR family; IMG reference gene:2503957002; PFAM: Bacterial regulatory protein, arsR family; regulatory protein ArsR 834031 10495013 Spico_0712 Sphaerochaeta coccoides DSM 17374 regulatory protein ArsR YP_004411320.1 833660 R 760011 CDS YP_004411321.1 330836680 10495014 complement(834158..836218) 1 NC_015436.1 COGs: COG3661 Alpha-glucuronidase; InterPro IPR011100:IPR011099; KEGG: rbi:RB2501_04530 alpha-glucuronidase; PFAM: Glycosyl hydrolase 67 middle; Glycosyl hydrolase 67, C-terminal; PRIAM: Alpha-glucuronidase; SPTR: Alpha-glucuronidase; IMG reference gene:2503957003; PFAM: Glycosyl hydrolase 67 C-terminus; Glycosyl hydrolase 67 middle domain; Glycosyl hydrolase 67 N-terminus; alpha-glucuronidase 836218 10495014 Spico_0713 Sphaerochaeta coccoides DSM 17374 alpha-glucuronidase YP_004411321.1 834158 R 760011 CDS YP_004411322.1 330836681 10495015 complement(836438..838081) 1 NC_015436.1 COGs: COG1653 ABC-type sugar transport system periplasmic component; KEGG: sta:STHERM_c18860 sugar ABC transporter substrate-binding protein; SPTR: Sugar ABC transporter substrate-binding protein; IMG reference gene:2503957004; PFAM: Bacterial extracellular solute-binding protein; sugar ABC transporter substrate-binding protein 838081 10495015 Spico_0714 Sphaerochaeta coccoides DSM 17374 sugar ABC transporter substrate-binding protein YP_004411322.1 836438 R 760011 CDS YP_004411323.1 330836682 10495016 complement(838119..838991) 1 NC_015436.1 COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: sta:STHERM_c18870 transporter; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Transporter; IMG reference gene:2503957005; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 838991 10495016 Spico_0715 Sphaerochaeta coccoides DSM 17374 binding-protein-dependent transport system inner membrane protein YP_004411323.1 838119 R 760011 CDS YP_004411324.1 330836683 10495017 complement(839002..839964) 1 NC_015436.1 COGs: COG4209 ABC-type polysaccharide transport system permease component; InterPro IPR000515; KEGG: sta:STHERM_c18880 transporter; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Transporter; IMG reference gene:2503957006; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 1 839964 10495017 Spico_0716 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter membrane protein 1 YP_004411324.1 839002 R 760011 CDS YP_004411325.1 330836684 10495018 840287..841387 1 NC_015436.1 COGs: COG1609 Transcriptional regulators; InterPro IPR000524:IPR001761; KEGG: ttm:Tthe_0670 transcriptional regulator, GntR family with LacI sensor; PFAM: HTH transcriptional regulator, GntR; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, GntR; SPTR: Transcriptional regulators; IMG reference gene:2503957007; PFAM: Bacterial regulatory proteins, gntR family; family; GntR family transcriptional regulator 841387 10495018 Spico_0717 Sphaerochaeta coccoides DSM 17374 GntR family transcriptional regulator YP_004411325.1 840287 D 760011 CDS YP_004411326.1 330836685 10495019 841384..844617 1 NC_015436.1 COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006104:IPR006103; KEGG: pjd:Pjdr2_2523 glycoside hydrolase 2 sugar binding; PFAM: Glycoside hydrolase, family 2, carbohydrate-binding; Glycoside hydrolase, family 2, TIM barrel; PRIAM: Beta-galactosidase; SPTR: Glycoside hydrolase 2 sugar binding; IMG reference gene:2503957008; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain; beta-galactosidase 844617 10495019 Spico_0718 Sphaerochaeta coccoides DSM 17374 beta-galactosidase YP_004411326.1 841384 D 760011 CDS YP_004411327.1 330836686 10495020 844631..845314 1 NC_015436.1 InterPro IPR001087; KEGG: sli:Slin_3977 lipolytic protein G-D-S-L family; PFAM: Lipase, GDSL; SPTR: acetylhydrolase; IMG reference gene:2503957009; PFAM: GDSL-like Lipase/Acylhydrolase; G-D-S-L family lipolytic protein 845314 10495020 Spico_0719 Sphaerochaeta coccoides DSM 17374 G-D-S-L family lipolytic protein YP_004411327.1 844631 D 760011 CDS YP_004411328.1 330836687 10495021 complement(845339..847468) 1 NC_015436.1 COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764:IPR002772; KEGG: cbe:Cbei_4974 glycoside hydrolase 3 protein; PFAM: Glycoside hydrolase, family 3, C-terminal; Glycoside hydrolase, family 3, N-terminal; PRIAM: Beta-glucosidase; SPTR: Glycoside hydrolase, family 3 domain protein; IMG reference gene:2503957010; PFAM: Glycosyl hydrolase 3 C terminal domain; Glycosyl hydrolase 3 N terminal domain; Beta-glucosidase 847468 10495021 Spico_0720 Sphaerochaeta coccoides DSM 17374 Beta-glucosidase YP_004411328.1 845339 R 760011 CDS YP_004411329.1 330836688 10495022 complement(847560..848408) 1 NC_015436.1 COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: pjd:Pjdr2_5596 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport system inner membrane component; IMG reference gene:2503957011; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 2 848408 10495022 Spico_0721 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter membrane protein 2 YP_004411329.1 847560 R 760011 CDS YP_004411330.1 330836689 10495023 complement(848405..849373) 1 NC_015436.1 COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: pjd:Pjdr2_5597 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport system inner membrane component; IMG reference gene:2503957012; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 1 849373 10495023 Spico_0722 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter membrane protein 1 YP_004411330.1 848405 R 760011 CDS YP_004411331.1 330836690 10495024 complement(849451..850803) 1 NC_015436.1 COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: pjd:Pjdr2_5598 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: bacterial extracellular solute-binding protein; IMG reference gene:2503957013; carbohydrate ABC transporter substrate-binding protein 850803 10495024 Spico_0723 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter substrate-binding protein YP_004411331.1 849451 R 760011 CDS YP_004411332.1 330836691 10495025 complement(850873..853008) 1 NC_015436.1 InterPro IPR000852; KEGG: ttm:Tthe_0982 xylan 1,4-beta-xylosidase; PFAM: Glycoside hydrolase, family 52; PRIAM: Xylan 1,4-beta-xylosidase; SPTR: Xylan 1,4-beta-xylosidase; IMG reference gene:2503957014; PFAM: Glycosyl hydrolase 52; xylan 1,4-beta-xylosidase 853008 10495025 Spico_0724 Sphaerochaeta coccoides DSM 17374 xylan 1,4-beta-xylosidase YP_004411332.1 850873 R 760011 CDS YP_004411333.1 330836692 10495026 complement(853114..853755) 1 NC_015436.1 COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789:IPR000792; KEGG: ote:Oter_0043 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SPTR: Two component transcriptional regulator, LuxR family; IMG reference gene:2503957015; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; LuxR family transcriptional regulator 853755 10495026 Spico_0725 Sphaerochaeta coccoides DSM 17374 LuxR family transcriptional regulator YP_004411333.1 853114 R 760011 CDS YP_004411334.1 330836693 10495027 complement(853769..855916) 1 NC_015436.1 COGs: COG1609 Transcriptional regulators; InterPro IPR001761:IPR003594; KEGG: ssm:Spirs_1217 ATP-binding region ATPase domain protein; PFAM: ATPase-like, ATP-binding domain; Periplasmic binding protein/LacI transcriptional regulator; SMART: ATPase-like, ATP-binding domain; SPTR: Histidine kinase; IMG reference gene:2503957016; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; family; histidine kinase 855916 10495027 Spico_0726 Sphaerochaeta coccoides DSM 17374 histidine kinase YP_004411334.1 853769 R 760011 CDS YP_004411335.1 330836694 10495028 complement(855971..856615) 1 NC_015436.1 COGs: COG0563 Adenylate kinase and related kinase; HAMAP: Adenylate kinase; InterPro IPR000850:IPR007862:IPR006259; KEGG: ssm:Spirs_1529 adenylate kinase; PFAM: Adenylate kinase; Adenylate kinase, active site lid domain; SPTR: Adenylate kinase; TIGRFAM: Adenylate kinase, subfamily; IMG reference gene:2503957017; PFAM: Adenylate kinase, active site lid; Adenylate kinase; TIGRFAM: adenylate kinases; adenylate kinase 856615 10495028 Spico_0727 Sphaerochaeta coccoides DSM 17374 adenylate kinase YP_004411335.1 855971 R 760011 CDS YP_004411336.1 330836695 10495029 856797..857861 1 NC_015436.1 COGs: COG0035 Uracil phosphoribosyltransferase; KEGG: ssm:Spirs_1527 phosphoribosyl transferase domain-containing protein; SPTR: Phosphoribosyl transferase domain protein; IMG reference gene:2503957018; uracil phosphoribosyltransferase 857861 10495029 Spico_0728 Sphaerochaeta coccoides DSM 17374 uracil phosphoribosyltransferase YP_004411336.1 856797 D 760011 CDS YP_004411337.1 330836696 10495030 857877..858479 1 NC_015436.1 KEGG: aae:aq_854 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957019; hypothetical protein 858479 10495030 Spico_0729 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411337.1 857877 D 760011 CDS YP_004411338.1 330836697 10495031 complement(858476..858937) 1 NC_015436.1 COGs: COG0328 Ribonuclease HI; HAMAP: Ribonuclease H; InterPro IPR002156:IPR022892; KEGG: rce:RC1_3647 ribonuclease H; PFAM: Ribonuclease H domain; PRIAM: Ribonuclease H; SPTR: Ribonuclease H; IMG reference gene:2503957020; PFAM: RNase H; RNase HI 858937 10495031 Spico_0730 Sphaerochaeta coccoides DSM 17374 RNase HI YP_004411338.1 858476 R 760011 CDS YP_004411339.1 330836698 10495032 complement(858997..859275) 1 NC_015436.1 COGs: COG0760 Parvulin-like peptidyl-prolyl isomerase; InterPro IPR000297; KEGG: dsh:Dshi_3566 PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SPTR: PpiC-type peptidyl-prolyl cis-trans isomerase; IMG reference gene:2503957021; PFAM: PPIC-type PPIASE domain; PpiC-type peptidyl-prolyl cis-trans isomerase 859275 10495032 Spico_0731 Sphaerochaeta coccoides DSM 17374 PpiC-type peptidyl-prolyl cis-trans isomerase YP_004411339.1 858997 R 760011 CDS YP_004411340.1 330836699 10495033 complement(859558..860166) 1 NC_015436.1 InterPro IPR008172; KEGG: ssm:Spirs_2340 adenylyl cyclase CyaB; PFAM: Adenylate cyclase; SPTR: uncharacterized protein; IMG reference gene:2503957022; PFAM: CYTH domain; adenylate cyclase 860166 10495033 Spico_0732 Sphaerochaeta coccoides DSM 17374 adenylate cyclase YP_004411340.1 859558 R 760011 CDS YP_004411341.1 330836700 10495034 complement(860168..860950) 1 NC_015436.1 KEGG: ssm:Spirs_2341 hypothetical protein; SPTR: membrane protein; IMG reference gene:2503957023; hypothetical protein 860950 10495034 Spico_0733 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411341.1 860168 R 760011 CDS YP_004411342.1 330836701 10495035 complement(861063..862253) 1 NC_015436.1 InterPro IPR011701; KEGG: sfu:Sfum_0552 major facilitator transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; IMG reference gene:2503957024; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein 862253 10495035 Spico_0734 Sphaerochaeta coccoides DSM 17374 major facilitator superfamily protein YP_004411342.1 861063 R 760011 CDS YP_004411343.1 330836702 10495036 862368..862820 1 NC_015436.1 COGs: COG1963 conserved hypothetical protein; InterPro IPR003832; KEGG: msv:Mesil_2435 acid phosphatase/vanadium-dependent haloperoxidase related protein; PFAM: Acid phosphatase/vanadium-dependent haloperoxidase-related; SPTR: Acid phosphatase/vanadium-dependent haloperoxidase related protein; IMG reference gene:2503957025; PFAM: Divergent PAP2 family; acid phosphatase/vanadium-dependent haloperoxidase related protein 862820 10495036 Spico_0735 Sphaerochaeta coccoides DSM 17374 acid phosphatase/vanadium-dependent haloperoxidase related protein YP_004411343.1 862368 D 760011 CDS YP_004411344.1 330836703 10495037 863109..863885 1 NC_015436.1 COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001638; KEGG: dal:Dalk_1255 extracellular solute-binding protein family 3; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; SPTR: Extracellular solute-binding protein family 3; IMG reference gene:2503957026; PFAM: Bacterial extracellular solute-binding proteins, family 3; ABC transporter substrate-binding protein 863885 10495037 Spico_0736 Sphaerochaeta coccoides DSM 17374 ABC transporter substrate-binding protein YP_004411344.1 863109 D 760011 CDS YP_004411345.1 330836704 10495038 864179..864943 1 NC_015436.1 COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001638; KEGG: dvl:Dvul_1824 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; SPTR: Amino acid ABC transporter, periplasmic amino acid-binding protein; IMG reference gene:2503957027; PFAM: Bacterial extracellular solute-binding proteins, family 3; ABC transporter substrate-binding protein 864943 10495038 Spico_0737 Sphaerochaeta coccoides DSM 17374 ABC transporter substrate-binding protein YP_004411345.1 864179 D 760011 CDS YP_004411346.1 330836705 10495039 865088..866389 1 NC_015436.1 COGs: COG2826 Transposase and inactivated derivatives IS30 family; InterPro IPR001584; KEGG: ccb:Clocel_0985 integrase catalytic region; PFAM: Integrase, catalytic core; SPTR: Transposase and inactivated derivatives, IS30 family; IMG reference gene:2503957028; integrase catalytic subunit 866389 10495039 Spico_0738 Sphaerochaeta coccoides DSM 17374 integrase catalytic subunit YP_004411346.1 865088 D 760011 CDS YP_004411347.1 330836706 10495040 866757..867626 1 NC_015436.1 COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: gsu:GSU3405 amino acid ABC transporter, permease; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Amino acid ABC transporter, permease; TIGRFAM: Amino acid ABC transporter, permease, 3-TM domain, His/Glu/Gln/Arg/opine family; IMG reference gene:2503957029; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family; amino acid ABC transporter permease 867626 10495040 Spico_0739 Sphaerochaeta coccoides DSM 17374 amino acid ABC transporter permease YP_004411347.1 866757 D 760011 CDS YP_004411348.1 330836707 10495041 867619..868359 1 NC_015436.1 COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: afu:AF0680 glutamine ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Glutamine ABC transporter, ATP-binding protein (GlnQ); IMG reference gene:2503957030; PFAM: ABC transporter; amino acid ABC transporter ATP-binding protein 868359 10495041 Spico_0740 Sphaerochaeta coccoides DSM 17374 amino acid ABC transporter ATP-binding protein YP_004411348.1 867619 D 760011 CDS YP_004411349.1 330836708 10495042 complement(868551..870356) 1 NC_015436.1 COGs: COG5421 Transposase; InterPro IPR002559; KEGG: cob:COB47_1677 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; IMG reference gene:2503957031; PFAM: Transposase DDE domain; transposase IS4 family protein 870356 10495042 Spico_0741 Sphaerochaeta coccoides DSM 17374 transposase IS4 family protein YP_004411349.1 868551 R 760011 CDS YP_004411350.1 330836709 10495044 870748..871536 1 NC_015436.1 COGs: COG0144 tRNA and rRNA cytosine-C5-methylase; InterPro IPR001678; KEGG: ssm:Spirs_2381 Fmu (Sun) domain protein; PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; SPTR: Fmu (Sun) domain protein; IMG reference gene:2503957033; PFAM: NOL1/NOP2/sun family; Fmu (Sun) domain-containing protein 871536 10495044 Spico_0743 Sphaerochaeta coccoides DSM 17374 Fmu (Sun) domain-containing protein YP_004411350.1 870748 D 760011 CDS YP_004411351.1 330836710 10495045 871557..873563 1 NC_015436.1 COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR000212; KEGG: ssm:Spirs_2383 UvrD/REP helicase; PFAM: DNA helicase, UvrD/REP type; SPTR: ATP-dependent DNA helicase PcrA; IMG reference gene:2503957034; PFAM: UvrD/REP helicase; UvrD/REP helicase 873563 10495045 Spico_0744 Sphaerochaeta coccoides DSM 17374 UvrD/REP helicase YP_004411351.1 871557 D 760011 CDS YP_004411352.1 330836711 10495046 complement(873717..873968) 1 NC_015436.1 KEGG: tgu:100218726 mitogen-activated protein kinase 6; SPTR: Mitogen-activated protein kinase 6; IMG reference gene:2503957035; hypothetical protein 873968 10495046 Spico_0745 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411352.1 873717 R 760011 CDS YP_004411353.1 330836712 10495047 complement(873973..874734) 1 NC_015436.1 COGs: COG1192 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: bhy:BHWA1_02684 plasmid partition protein; PFAM: Cobyrinic acid a,c-diamide synthase; SPTR: Plasmid partition protein; IMG reference gene:2503957036; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; Cobyrinic acid ac-diamide synthase 874734 10495047 Spico_0746 Sphaerochaeta coccoides DSM 17374 Cobyrinic acid ac-diamide synthase YP_004411353.1 873973 R 760011 CDS YP_004411354.1 330836713 10495048 complement(875022..876356) 1 NC_015436.1 COGs: COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; InterPro IPR001360:IPR017736; KEGG: mrb:Mrub_0288 beta-galactosidase; PFAM: Glycoside hydrolase, family 1; PRIAM: Beta-glucosidase; SPTR: Beta-galactosidase; TIGRFAM: Glycoside hydrolase, family 1, beta-glucosidase; IMG reference gene:2503957037; PFAM: Glycosyl hydrolase 1; TIGRFAM: beta-galactosidase; broad-specificity cellobiase 876356 10495048 Spico_0747 Sphaerochaeta coccoides DSM 17374 broad-specificity cellobiase YP_004411354.1 875022 R 760011 CDS YP_004411355.1 330836714 10495049 876578..877336 1 NC_015436.1 COGs: COG0708 Exonuclease III; InterPro IPR005135:IPR000097:IPR004808; KEGG: aoe:Clos_2318 exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; PRIAM: Exodeoxyribonuclease III; SPTR: Exodeoxyribonuclease III Xth; TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; IMG reference gene:2503957038; PFAM: Endonuclease/Exonuclease/phosphatase; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth); exodeoxyribonuclease III 877336 10495049 Spico_0748 Sphaerochaeta coccoides DSM 17374 exodeoxyribonuclease III YP_004411355.1 876578 D 760011 CDS YP_004411356.1 330836715 10495050 complement(877367..879202) 1 NC_015436.1 COGs: COG1217 membrane GTPase involved in stress response; InterProIPR000795:IPR004161:IPR000640:IPR005225:IPR 006298; KEGG: ssm:Spirs_3901 GTP-binding protein TypA; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; SMART: Translation elongation factor EFG/EF2, C-terminal; SPTR: GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein; IMG reference gene:2503957039; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain; GTP-binding protein TypA 879202 10495050 Spico_0749 Sphaerochaeta coccoides DSM 17374 GTP-binding protein TypA YP_004411356.1 877367 R 760011 CDS YP_004411357.1 330836716 10495055 885244..885867 1 NC_015436.1 InterPro IPR000182; KEGG: ret:RHE_CH01554 acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: acetyltransferase; IMG reference gene:2503957044; PFAM: Acetyltransferase (GNAT) family; N-acetyltransferase GCN5 885867 10495055 Spico_0750 Sphaerochaeta coccoides DSM 17374 N-acetyltransferase GCN5 YP_004411357.1 885244 D 760011 CDS YP_004411358.1 330836717 10495056 complement(885935..886747) 1 NC_015436.1 COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: str:Sterm_0308 alpha/beta fold family hydrolase, PFAM: Alpha/beta hydrolase fold-1; SPTR: Alpha/beta hydrolase fold protein; IMG reference gene:2503957045; PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase 886747 10495056 Spico_0751 Sphaerochaeta coccoides DSM 17374 alpha/beta hydrolase YP_004411358.1 885935 R 760011 CDS YP_004411359.1 330836718 10495057 complement(886836..888518) 1 NC_015436.1 COGs: COG1236 exonuclease of the beta-lactamase fold involved in RNA processing; InterPro IPR001279:IPR011108; KEGG: cce:Ccel_1759 RNA-metabolising metallo-beta-lactamase; PFAM: Beta-lactamase-like; RNA-metabolising metallo-beta-lactamase; SMART: Beta-lactamase-like; SPTR: uncharacterized protein; IMG reference gene:2503957046; PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain; beta-lactamase domain-containing protein 888518 10495057 Spico_0752 Sphaerochaeta coccoides DSM 17374 beta-lactamase domain-containing protein YP_004411359.1 886836 R 760011 CDS YP_004411360.1 330836719 10495058 complement(888558..889010) 1 NC_015436.1 COGs: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); InterPro IPR002178; KEGG: rba:RB8584 PTS system, fructose-specific enzyme II, BC component; PFAM: Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2; SPTR: PTS system, fructose-specific enzyme II, BC component; IMG reference gene:2503957047; PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 889010 10495058 Spico_0753 Sphaerochaeta coccoides DSM 17374 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_004411360.1 888558 R 760011 CDS YP_004411361.1 330836720 10495059 complement(889023..889514) 1 NC_015436.1 InterPro IPR006016; KEGG: ssm:Spirs_3105 UspA domain protein; PFAM: UspA; SPTR: UspA domain protein; IMG reference gene:2503957048; PFAM: Universal stress protein family; UspA domain-containing protein 889514 10495059 Spico_0754 Sphaerochaeta coccoides DSM 17374 UspA domain-containing protein YP_004411361.1 889023 R 760011 CDS YP_004411362.1 330836721 10495060 complement(889580..890227) 1 NC_015436.1 COGs: COG1394 H+-ATPase subunit D; HAMAP: ATPase, V1/A1 complex, subunit D; InterPro IPR002699; KEGG: ssm:Spirs_3106 V-type ATPase, D subunit; PFAM: ATPase, V1/A1 complex, subunit D; SPTR: V-type ATPase, D subunit; TIGRFAM: ATPase, V1/A1 complex, subunit D; IMG reference gene:2503957049; PFAM: ATP synthase subunit D; TIGRFAM: H(+)-transporting ATP synthase, vacuolar type, subunit D; V-type ATP synthase subunit D 890227 10495060 Spico_0755 Sphaerochaeta coccoides DSM 17374 V-type ATP synthase subunit D YP_004411362.1 889580 R 760011 CDS YP_004411363.1 330836722 10495061 complement(890231..891655) 1 NC_015436.1 COGs: COG1156 H+-ATPase subunit B; HAMAP: V-type ATP synthase regulatory subunit B/beta; InterPro IPR004100:IPR000194:IPR000793:IPR022879; KEGG: ssm:Spirs_3107 H+transporting two-sector ATPase alpha/beta subunit central region; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; SPTR: V-type ATP synthase beta chain 2; IMG reference gene:2503957050; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; V-type ATP synthase subunit beta 891655 10495061 Spico_0756 Sphaerochaeta coccoides DSM 17374 V-type ATP synthase subunit beta YP_004411363.1 890231 R 760011 CDS YP_004411364.1 330836723 10495062 complement(891639..893450) 1 NC_015436.1 COGs: COG1155 H+-ATPase subunit A; HAMAP: V-type ATP synthase catalytic subunit A/alpha; InterProIPR004100:IPR000194:IPR000793:IPR022878:IPR 003593; KEGG: ssm:Spirs_3108 sodium-transporting two-sector ATPase; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: V-type ATP synthase alpha chain; IMG reference gene:2503957051; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; V-type ATP synthase subunit alpha 893450 10495062 Spico_0757 Sphaerochaeta coccoides DSM 17374 V-type ATP synthase subunit alpha YP_004411364.1 891639 R 760011 CDS YP_004411365.1 330836724 10495063 complement(893435..894082) 1 NC_015436.1 InterPro IPR002842; KEGG: ssm:Spirs_3109 H+transporting two-sector ATPase E subunit; PFAM: ATPase, V1/A1 complex, subunit E; SPTR: Vacuolar H+-ATPase E subunit; IMG reference gene:2503957052; PFAM: ATP synthase (E/31 kDa) subunit; H+transporting two-sector ATPase E subunit 894082 10495063 Spico_0758 Sphaerochaeta coccoides DSM 17374 H+transporting two-sector ATPase E subunit YP_004411365.1 893435 R 760011 CDS YP_004411366.1 330836725 10495064 complement(894079..894381) 1 NC_015436.1 COGs: COG1436 H+-ATPase subunit F; InterPro IPR008218; KEGG: ssm:Spirs_3110 vacuolar H+transporting two-sector ATPase F subunit; PFAM: ATPase, V1/A1 complex, subunit F; SPTR: A1A0 archaeal ATP synthase subunit F AhaF; IMG reference gene:2503957053; PFAM: ATP synthase (F/14-kDa) subunit; Vacuolar H+transporting two-sector ATPase F subunit 894381 10495064 Spico_0759 Sphaerochaeta coccoides DSM 17374 Vacuolar H+transporting two-sector ATPase F subunit YP_004411366.1 894079 R 760011 CDS YP_004411367.1 330836726 10495065 complement(894394..894756) 1 NC_015436.1 InterPro IPR002379; KEGG: ssm:Spirs_3111 H+transporting two-sector ATPase C subunit; PFAM: ATPase, F0/V0 complex, subunit C; SPTR: V-ATPase F-subunit; IMG reference gene:2503957054; PFAM: ATP synthase subunit C; H+transporting two-sector ATPase subunit C 894756 10495065 Spico_0760 Sphaerochaeta coccoides DSM 17374 H+transporting two-sector ATPase subunit C YP_004411367.1 894394 R 760011 CDS YP_004411368.1 330836727 10495066 complement(894788..896767) 1 NC_015436.1 COGs: COG1269 H+-ATPase subunit I; InterPro IPR002490; KEGG: ssm:Spirs_3112 V-type ATPase 116 kDa subunit; PFAM: ATPase, V0/A0 complex, 116kDa subunit; SPTR: V-type sodium ATP synthase subunit I; IMG reference gene:2503957055; PFAM: V-type ATPase 116kDa subunit family; V-type ATPase 116 kDa subunit 896767 10495066 Spico_0761 Sphaerochaeta coccoides DSM 17374 V-type ATPase 116 kDa subunit YP_004411368.1 894788 R 760011 CDS YP_004411369.1 330836728 10495067 complement(896764..897894) 1 NC_015436.1 COGs: COG1527 H+-ATPase subunit C; InterPro IPR002843; KEGG: ssm:Spirs_3113 H+transporting two-sector ATPase C (AC39) subunit; PFAM: ATPase, V0/A0 complex, subunit C/D; SPTR: H(+)-transporting two-sector ATPase; IMG reference gene:2503957056; PFAM: ATP synthase (C/AC39) subunit; H+transporting two-sector ATPase C (AC39) subunit 897894 10495067 Spico_0762 Sphaerochaeta coccoides DSM 17374 H+transporting two-sector ATPase C (AC39) subunit YP_004411369.1 896764 R 760011 CDS YP_004411370.1 330836729 10495068 complement(897891..898250) 1 NC_015436.1 KEGG: sna:Snas_1610 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957057; hypothetical protein 898250 10495068 Spico_0763 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411370.1 897891 R 760011 CDS YP_004411371.1 330836730 10495069 complement(898478..899674) 1 NC_015436.1 COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR001959:IPR010095; KEGG: xfm:Xfasm12_1563 transposase OrfB; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal; SPTR: Transposase OrfB; TIGRFAM: Transposase, IS605 OrfB, C-terminal; IMG reference gene:2503957058; PFAM: Helix-turn-helix domain; transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region; transposase, IS605 OrfB family 899674 10495069 Spico_0764 Sphaerochaeta coccoides DSM 17374 transposase, IS605 OrfB family YP_004411371.1 898478 R 760011 CDS YP_004411372.1 330836731 10495070 complement(899668..900291) 1 NC_015436.1 COGs: COG2452 site-specific integrase-resolvase; InterPro IPR000551:IPR006119; KEGG: xfm:Xfasm12_1564 hypothetical protein; PFAM: Resolvase, N-terminal; HTH transcriptional regulator, MerR; SMART: Resolvase, N-terminal; SPTR: uncharacterized protein; IMG reference gene:2503957059; PFAM: MerR family regulatory protein; Resolvase, N terminal domain; resolvase domain-containing protein 900291 10495070 Spico_0765 Sphaerochaeta coccoides DSM 17374 resolvase domain-containing protein YP_004411372.1 899668 R 760011 CDS YP_004411373.1 330836732 10495071 900602..900820 1 NC_015436.1 KEGG: bcb:BCB4264_A3629 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957060; hypothetical protein 900820 10495071 Spico_0766 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411373.1 900602 D 760011 CDS YP_004411374.1 330836733 10495072 900810..901490 1 NC_015436.1 COGs: COG2184 Protein involved in cell division; InterPro IPR003812; KEGG: ajs:Ajs_4242 filamentation induced by cAMP protein Fic; PFAM: Filamentation induced by cAMP/death on curing-related; SPTR: Filamentation induced by cAMP protein Fic; IMG reference gene:2503957061; PFAM: Fic/DOC family; Fic family protein 901490 10495072 Spico_0767 Sphaerochaeta coccoides DSM 17374 Fic family protein YP_004411374.1 900810 D 760011 CDS YP_004411375.1 330836734 10495074 901852..903519 1 NC_015436.1 COGs: COG0366 Glycosidase; InterPro IPR006047:IPR006589; KEGG: csc:Csac_2428 alpha amylase, catalytic region; PFAM: Glycosyl hydrolase, family 13, catalytic domain; PRIAM: Oligo-1,6-glucosidase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; SPTR: Alpha amylase, catalytic region; IMG reference gene:2503957063; PFAM: Alpha amylase, catalytic domain; oligo-1,6-glucosidase 903519 10495074 Spico_0768 Sphaerochaeta coccoides DSM 17374 oligo-1,6-glucosidase YP_004411375.1 901852 D 760011 CDS YP_004411376.1 330836735 10495075 903516..905858 1 NC_015436.1 COGs: COG3345 Alpha-galactosidase; InterPro IPR000111; KEGG: cpy:Cphy_1936 glycoside hydrolase clan GH-D; PFAM: Glycoside hydrolase, clan GH-D; PRIAM: Alpha-galactosidase; SPTR: Glycoside hydrolase clan GH-D; IMG reference gene:2503957064; PFAM: Melibiase; alpha-galactosidase 905858 10495075 Spico_0769 Sphaerochaeta coccoides DSM 17374 alpha-galactosidase YP_004411376.1 903516 D 760011 CDS YP_004411377.1 330836736 10495076 905954..907303 1 NC_015436.1 COGs: COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase; InterPro IPR001360; KEGG: cpy:Cphy_1937 glycoside hydrolase; PFAM: Glycoside hydrolase, family 1; PRIAM: Beta-glucosidase; SPTR: Glycoside hydrolase 1; IMG reference gene:2503957065; PFAM: Glycosyl hydrolase 1; Beta-glucosidase 907303 10495076 Spico_0770 Sphaerochaeta coccoides DSM 17374 Beta-glucosidase YP_004411377.1 905954 D 760011 CDS YP_004411378.1 330836737 10495077 907296..908696 1 NC_015436.1 COGs: COG2211 Na+/melibiose symporter and related transporter; InterPro IPR011701:IPR001927; KEGG: cpy:Cphy_1935 sugar (glycoside-pentoside-hexuronide) transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Sugar (Glycoside-Pentoside-Hexuronide) transporter; TIGRFAM: Sodium:galactoside symporter; IMG reference gene:2503957066; TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; sugar (Glycoside-Pentoside-Hexuronide) transporter 908696 10495077 Spico_0771 Sphaerochaeta coccoides DSM 17374 sugar (Glycoside-Pentoside-Hexuronide) transporter YP_004411378.1 907296 D 760011 CDS YP_004411379.1 330836738 10495078 908870..909616 1 NC_015436.1 COGs: COG1296 branched-chain amino acid permease (azaleucine resistance); InterPro IPR011606; KEGG: gwc:GWCH70_0661 AzlC family protein; PFAM: Branched-chain amino acid transport, permease; SPTR: AzlC family protein; IMG reference gene:2503957067; PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC; AzlC family protein 909616 10495078 Spico_0772 Sphaerochaeta coccoides DSM 17374 AzlC family protein YP_004411379.1 908870 D 760011 CDS YP_004411380.1 330836739 10495079 909607..909930 1 NC_015436.1 InterPro IPR008407; KEGG: bse:Bsel_1519 branched-chain amino acid transport; PFAM: Branched-chain amino acid transport, AzlD; SPTR: uncharacterized protein; IMG reference gene:2503957068; PFAM: Branched-chain amino acid transport protein (AzlD); branched-chain amino acid transport 909930 10495079 Spico_0773 Sphaerochaeta coccoides DSM 17374 branched-chain amino acid transport YP_004411380.1 909607 D 760011 CDS YP_004411381.1 330836740 10495080 complement(909981..910643) 1 NC_015436.1 KEGG: fbc:FB2170_04545 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957069; hypothetical protein 910643 10495080 Spico_0774 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411381.1 909981 R 760011 CDS YP_004411382.1 330836741 10495081 complement(910806..911423) 1 NC_015436.1 KEGG: paa:Paes_0399 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957070; hypothetical protein 911423 10495081 Spico_0775 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411382.1 910806 R 760011 CDS YP_004411383.1 330836742 10495082 complement(911770..912201) 1 NC_015436.1 COGs: COG0824 thioesterase; InterPro IPR006683:IPR006684; KEGG: asu:Asuc_1795 Pol-Pal system-associated acyl-CoA thioesterase; PFAM: Thioesterase superfamily; SPTR: Pol-Pal system-associated acyl-CoA thioesterase; TIGRFAM: 4-hydroxybenzoyl-CoA thioesterase; IMG reference gene:2503957071; PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; tol-pal system-associated acyl-CoA thioesterase; 4-hydroxybenzoyl-CoA thioesterase 912201 10495082 Spico_0776 Sphaerochaeta coccoides DSM 17374 4-hydroxybenzoyl-CoA thioesterase YP_004411383.1 911770 R 760011 CDS YP_004411384.1 330836743 10495083 complement(912202..913470) 1 NC_015436.1 COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR022644:IPR022643; KEGG: ssm:Spirs_1460 Orn/DAP/Arg decarboxylase 2; PFAM: Orn/DAP/Arg decarboxylase 2, C-terminal; Orn/DAP/Arg decarboxylase 2, N-terminal; PRIAM: Diaminopimelate decarboxylase; SPTR: Diaminopimelate decarboxylase; IMG reference gene:2503957072; PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase; diaminopimelate decarboxylase 913470 10495083 Spico_0777 Sphaerochaeta coccoides DSM 17374 diaminopimelate decarboxylase YP_004411384.1 912202 R 760011 CDS YP_004411385.1 330836744 10495084 complement(913467..914708) 1 NC_015436.1 COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; HAMAP: LL-diaminopimelate aminotransferase; InterPro IPR004839:IPR019942; KEGG: ssm:Spirs_1461 LL-diaminopimelate aminotransferase; PFAM: Aminotransferase, class I/classII; PRIAM: LL-diaminopimelate aminotransferase; SPTR: LL-diaminopimelate aminotransferase; TIGRFAM: LL-diaminopimelate aminotransferase, plant-related; IMG reference gene:2503957073; PFAM: Aminotransferase class I and II; TIGRFAM: LL-diaminopimelate aminotransferase; LL-diaminopimelate aminotransferase apoenzyme 914708 10495084 Spico_0778 Sphaerochaeta coccoides DSM 17374 LL-diaminopimelate aminotransferase apoenzyme YP_004411385.1 913467 R 760011 CDS YP_004411386.1 330836745 10495085 complement(914828..915742) 1 NC_015436.1 COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; HAMAP: Dihydrodipicolinate synthase; InterPro IPR002220:IPR005263; KEGG: ssm:Spirs_1462 dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase; SPTR: Dihydrodipicolinate synthase; TIGRFAM: Dihydrodipicolinate synthase subfamily; IMG reference gene:2503957074; PFAM: Dihydrodipicolinate synthetase; TIGRFAM: dihydrodipicolinate synthase; dihydrodipicolinate synthase 915742 10495085 Spico_0779 Sphaerochaeta coccoides DSM 17374 dihydrodipicolinate synthase YP_004411386.1 914828 R 760011 CDS YP_004411387.1 330836746 10495086 complement(915786..916532) 1 NC_015436.1 COGs: COG0289 Dihydrodipicolinate reductase; HAMAP: Dihydrodipicolinate reductase, bacterial/plant; InterPro IPR000846:IPR022663:IPR011770; KEGG: sta:STHERM_c08680 dihydrodipicolinate reductase; PFAM: Dihydrodipicolinate reductase, N-terminal; Dihydrodipicolinate reductase, C-terminal; PRIAM: Dihydrodipicolinate reductase; SPTR: Dihydrodipicolinate reductase; TIGRFAM: Dihydrodipicolinate reductase, bacterial/plant; IMG reference gene:2503957075; PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase; Dihydrodipicolinate reductase 916532 10495086 Spico_0780 Sphaerochaeta coccoides DSM 17374 Dihydrodipicolinate reductase YP_004411387.1 915786 R 760011 CDS YP_004411388.1 330836747 10495087 complement(916689..919214) 1 NC_015436.1 COGs: COG0550 Topoisomerase IA; InterProIPR006171:IPR013497:IPR003601:IPR003602:IPR 005738; KEGG: dhd:Dhaf_4786 DNA topoisomerase III; PFAM: DNA topoisomerase, type IA, central; Toprim domain; PRIAM: DNA topoisomerase; SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain; SPTR: DNA topoisomerase; TIGRFAM: DNA topoisomerase III, bacterial-type; IMG reference gene:2503957076; PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase III, bacteria and conjugative plasmid; DNA topoisomerase III 919214 10495087 Spico_0781 Sphaerochaeta coccoides DSM 17374 DNA topoisomerase III YP_004411388.1 916689 R 760011 CDS YP_004411389.1 330836748 10495088 919491..919658 1 NC_015436.1 InterPro IPR001450; KEGG: fma:FMG_1124 ferredoxin; PFAM: 4Fe-4S binding domain; SPTR: Conserved domain protein; manually curated; IMG reference gene:2503957077; PFAM: 4Fe-4S binding domain; 4Fe-4S ferredoxin 919658 10495088 Spico_0782 Sphaerochaeta coccoides DSM 17374 4Fe-4S ferredoxin YP_004411389.1 919491 D 760011 CDS YP_004411390.1 330836749 10495089 919837..921051 1 NC_015436.1 COGs: COG1570 Exonuclease VII large subunit; HAMAP: Exonuclease VII, large subunit; InterPro IPR004365:IPR020579:IPR003753; KEGG: ssm:Spirs_1343 exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; PRIAM: Exodeoxyribonuclease VII; SPTR: Exodeoxyribonuclease 7 large subunit; TIGRFAM: Exonuclease VII, large subunit; IMG reference gene:2503957078; PFAM: Exonuclease VII, large subunit; OB-fold nucleic acid binding domain; TIGRFAM: exodeoxyribonuclease VII, large subunit; exodeoxyribonuclease 7 large subunit 921051 10495089 Spico_0783 Sphaerochaeta coccoides DSM 17374 exodeoxyribonuclease 7 large subunit YP_004411390.1 919837 D 760011 CDS YP_004411391.1 330836750 10495090 921048..921287 1 NC_015436.1 HAMAP: Exonuclease VII, small subunit; InterPro IPR003761; KEGG: sta:STHERM_c09580 hypothetical protein; PFAM: Exonuclease VII, small subunit; SPTR: uncharacterized protein; IMG reference gene:2503957079; PFAM: Exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; exodeoxyribonuclease 7 small subunit 921287 10495090 Spico_0784 Sphaerochaeta coccoides DSM 17374 exodeoxyribonuclease 7 small subunit YP_004411391.1 921048 D 760011 CDS YP_004411392.1 330836751 10495091 921288..921872 1 NC_015436.1 COGs: COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; InterPro IPR002818; KEGG: clj:CLJU_c17590 intracellular protease/amidase related enzyme,ThiJ family; PFAM: ThiJ/PfpI; SPTR: DJ-1/PfpI family protein; IMG reference gene:2503957080; PFAM: DJ-1/PfpI family; ThiJ/PfpI domain-containing protein 921872 10495091 Spico_0785 Sphaerochaeta coccoides DSM 17374 ThiJ/PfpI domain-containing protein YP_004411392.1 921288 D 760011 CDS YP_004411393.1 330836752 10495092 complement(922035..923138) 1 NC_015436.1 COGs: COG2309 Leucyl aminopeptidase (aminopeptidase T); KEGG: ssm:Spirs_1009 peptidase M29 aminopeptidase II; SPTR: Peptidase M29 aminopeptidase II; IMG reference gene:2503957081; PFAM: Thermophilic metalloprotease (M29); peptidase M29 aminopeptidase II 923138 10495092 Spico_0786 Sphaerochaeta coccoides DSM 17374 peptidase M29 aminopeptidase II YP_004411393.1 922035 R 760011 CDS YP_004411394.1 330836753 10495093 complement(923192..923962) 1 NC_015436.1 COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: tde:TDE1083 RNA pseudouridylate synthase; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Pseudouridine synthase; IMG reference gene:2503957082; PFAM: RNA pseudouridylate synthase; pseudouridine synthase 923962 10495093 Spico_0787 Sphaerochaeta coccoides DSM 17374 pseudouridine synthase YP_004411394.1 923192 R 760011 CDS YP_004411395.1 330836754 10495094 924363..926447 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR000408; KEGG: ttm:Tthe_2617 S-layer domain protein; PFAM: Regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; IMG reference gene:2503957083; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 926447 10495094 Spico_0788 Sphaerochaeta coccoides DSM 17374 chromosome condensation regulator RCC1 YP_004411395.1 924363 D 760011 CDS YP_004411396.1 330836755 10495095 complement(926546..927256) 1 NC_015436.1 COGs: COG0670 Integral membrane protein interacts with FtsH; InterPro IPR006214; KEGG: ssm:Spirs_1304 protein of unknown function UPF0005; PFAM: Inhibitor of apoptosis-promoting Bax1-related; SPTR: uncharacterized protein; IMG reference gene:2503957084; PFAM: Uncharacterised protein family UPF0005; hypothetical protein 927256 10495095 Spico_0789 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411396.1 926546 R 760011 CDS YP_004411397.1 330836756 10495096 927463..928233 1 NC_015436.1 KEGG: srt:Srot_2429 ABC transporter-like protein; SPTR: ABC transporter related protein; IMG reference gene:2503957085; hypothetical protein 928233 10495096 Spico_0790 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411397.1 927463 D 760011 CDS YP_004411398.1 330836757 10495097 928254..930545 1 NC_015436.1 COGs: COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase; InterPro IPR003959:IPR003593; KEGG: ssm:Spirs_1297 AAA ATPase central domain protein; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; SPTR: ATPase, AAA family; IMG reference gene:2503957086; PFAM: MgsA AAA+ ATPase C terminal; Holliday junction DNA helicase ruvB N-terminus; recombination protein MgsA 930545 10495097 Spico_0791 Sphaerochaeta coccoides DSM 17374 recombination protein MgsA YP_004411398.1 928254 D 760011 CDS YP_004411399.1 330836758 10495103 931623..932981 1 NC_015436.1 COGs: COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); HAMAP: Trigger factor; InterPro IPR008881:IPR001179:IPR008880:IPR005215; KEGG: ssm:Spirs_1296 trigger factor; PFAM: Trigger factor, ribosome-binding, bacterial; Peptidyl-prolyl cis-trans isomerase, FKBP-type; Trigger factor, C-terminal, bacterial; SPTR: Trigger factor; TIGRFAM: Trigger factor; IMG reference gene:2503957092; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Bacterial trigger factor protein (TF) C-terminus; Bacterial trigger factor protein (TF); TIGRFAM: trigger factor; trigger factor Tig 932981 10495103 Spico_0792 Sphaerochaeta coccoides DSM 17374 trigger factor Tig YP_004411399.1 931623 D 760011 CDS YP_004411400.1 330836759 10495104 933046..933648 1 NC_015436.1 COGs: COG0740 Protease subunit of ATP-dependent Clp protease; HAMAP: Peptidase S14, ClpP; InterPro IPR001907; KEGG: ssm:Spirs_1295 ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: Peptidase S14, ClpP; PRIAM: Endopeptidase Clp; SPTR: ATP-dependent Clp protease proteolytic subunit; IMG reference gene:2503957093; PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; ATP-dependent Clp protease proteolytic subunit 933648 10495104 Spico_0793 Sphaerochaeta coccoides DSM 17374 ATP-dependent Clp protease proteolytic subunit YP_004411400.1 933046 D 760011 CDS YP_004411401.1 330836760 10495105 933651..934883 1 NC_015436.1 COGs: COG1219 ATP-dependent protease Clp ATPase subunit; HAMAP: Clp protease, ATP-binding subunit ClpX; InterProIPR010603:IPR013093:IPR019489:IPR004487:IPR 003593; KEGG: ssm:Spirs_1294 ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase, AAA-2; Zinc finger, C4-type; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: ATP-dependent Clp protease ATP-binding subunit ClpX; TIGRFAM: Clp protease, ATP-binding subunit ClpX; IMG reference gene:2503957094; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX); ATP-dependent Clp protease ATP-binding subunit ClpX 934883 10495105 Spico_0794 Sphaerochaeta coccoides DSM 17374 ATP-dependent Clp protease ATP-binding subunit ClpX YP_004411401.1 933651 D 760011 CDS YP_004411402.1 330836761 10495106 934885..935868 1 NC_015436.1 COGs: COG0618 Exopolyphosphatase-related protein; InterPro IPR001667:IPR003156; KEGG: tde:TDE1479 DHH superfamily protein, subfamily 1; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; SPTR: DHH superfamily protein, subfamily 1; IMG reference gene:2503957095; PFAM: DHH family; DHHA1 domain; phosphoesterase RecJ domain-containing protein 935868 10495106 Spico_0795 Sphaerochaeta coccoides DSM 17374 phosphoesterase RecJ domain-containing protein YP_004411402.1 934885 D 760011 CDS YP_004411403.1 330836762 10495107 936011..937228 1 NC_015436.1 KEGG: ssm:Spirs_1290 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957096; hypothetical protein 937228 10495107 Spico_0796 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411403.1 936011 D 760011 CDS YP_004411404.1 330836763 10495108 937221..937916 1 NC_015436.1 COGs: COG0127 Xanthosine triphosphate pyrophosphatase; HAMAP: Nucleoside-triphosphatase; InterPro IPR002637:IPR020922; KEGG: ssm:Spirs_1289 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; PFAM: Ham1-like protein; PRIAM: Nucleoside-triphosphatase; SPTR: Nucleoside-triphosphatase; IMG reference gene:2503957097; PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; nucleoside-triphosphatase rdgB 937916 10495108 Spico_0797 Sphaerochaeta coccoides DSM 17374 nucleoside-triphosphatase rdgB YP_004411404.1 937221 D 760011 CDS YP_004411405.1 330836764 10495109 937891..939693 1 NC_015436.1 COGs: COG1164 Oligoendopeptidase F; InterPro IPR013647:IPR001567:IPR004438; KEGG: ssm:Spirs_1288 oligoendopeptidase F; PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F; Peptidase M3B, oligopeptidase F, N-terminal; SPTR: Oligoendopeptidase F; TIGRFAM: Peptidase M3B, oligoendopeptidase F; IMG reference gene:2503957098; PFAM: Oligopeptidase F; Peptidase M3; TIGRFAM: oligoendopeptidase F; oligopeptidase F 939693 10495109 Spico_0798 Sphaerochaeta coccoides DSM 17374 oligopeptidase F YP_004411405.1 937891 D 760011 CDS YP_004411406.1 330836765 10495111 940376..940579 1 NC_015436.1 KEGG: bay:RBAM_016980 BaeJ; SPTR: BaeJ; IMG reference gene:2503957100; hypothetical protein 940579 10495111 Spico_0799 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411406.1 940376 D 760011 CDS YP_004411407.1 330836766 10495112 complement(940626..940748) 1 NC_015436.1 IMG reference gene:2503957101; hypothetical protein 940748 10495112 Spico_0800 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411407.1 940626 R 760011 CDS YP_004411408.1 330836767 10495113 complement(941313..941435) 1 NC_015436.1 IMG reference gene:2503957102; hypothetical protein 941435 10495113 Spico_0801 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411408.1 941313 R 760011 CDS YP_004411409.1 330836768 10495114 complement(941628..942479) 1 NC_015436.1 KEGG: afv:AFLA_136820 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957103; hypothetical protein 942479 10495114 Spico_0802 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411409.1 941628 R 760011 CDS YP_004411410.1 330836769 10495115 complement(942495..942974) 1 NC_015436.1 KEGG: ath:AT2G32240 hypothetical protein; SPTR: Whole genome shotgun sequence of line PN40024, scaffold_16.assembly12x; IMG reference gene:2503957104; hypothetical protein 942974 10495115 Spico_0803 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411410.1 942495 R 760011 CDS YP_004411411.1 330836770 10495116 complement(942983..947212) 1 NC_015436.1 InterPro IPR008160; KEGG: spv:SPH_0115 phage minor structural protein; PFAM: Collagen triple helix repeat; SPTR: Phage minor structural protein; IMG reference gene:2503957105; PFAM: Collagen triple helix repeat (20 copies); collagen triple helix repeat-containing protein 947212 10495116 Spico_0804 Sphaerochaeta coccoides DSM 17374 collagen triple helix repeat-containing protein YP_004411411.1 942983 R 760011 CDS YP_004411412.1 330836771 10495117 complement(947214..950093) 1 NC_015436.1 KEGG: rce:RC1_0084 phage tail tape measure protein, SPTR: Phage tail tape measure protein, ; IMG reference gene:2503957106; hypothetical protein 950093 10495117 Spico_0805 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411412.1 947214 R 760011 CDS YP_004411413.1 330836772 10495118 complement(950147..950398) 1 NC_015436.1 IMG reference gene:2503957107; hypothetical protein 950398 10495118 Spico_0806 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411413.1 950147 R 760011 CDS YP_004411414.1 330836773 10495119 complement(950419..950820) 1 NC_015436.1 KEGG: smf:Smon_0099 cell division protein FtsZ; SPTR: Cell division protein ftsZ; IMG reference gene:2503957108; hypothetical protein 950820 10495119 Spico_0807 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411414.1 950419 R 760011 CDS YP_004411415.1 330836774 10495120 complement(950780..951031) 1 NC_015436.1 KEGG: cim:CIMG_07117 hypothetical protein; SPTR: ribose-phosphate pyrophosphokinase; IMG reference gene:2503957109; hypothetical protein 951031 10495120 Spico_0808 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411415.1 950780 R 760011 CDS YP_004411416.1 330836775 10495121 complement(951028..951729) 1 NC_015436.1 KEGG: cai:Caci_5320 amidohydrolase 3; SPTR: Amidohydrolase 3; IMG reference gene:2503957110; hypothetical protein 951729 10495121 Spico_0809 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411416.1 951028 R 760011 CDS YP_004411417.1 330836776 10495122 complement(951732..952196) 1 NC_015436.1 KEGG: ecb:100051325 similar to Signal recognition particle 68 kDa protein (SRP68); SPTR: Uncharacterized protein; IMG reference gene:2503957111; hypothetical protein 952196 10495122 Spico_0810 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411417.1 951732 R 760011 CDS YP_004411418.1 330836777 10495123 complement(952193..952783) 1 NC_015436.1 KEGG: avi:Avi_2997 Mu-like prophage protein; SPTR: uncharacterized protein; IMG reference gene:2503957112; PFAM: Phage virion morphogenesis family; hypothetical protein 952783 10495123 Spico_0811 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411418.1 952193 R 760011 CDS YP_004411419.1 330836778 10495124 complement(952755..953183) 1 NC_015436.1 KEGG: dap:Dacet_2235 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957113; hypothetical protein 953183 10495124 Spico_0812 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411419.1 952755 R 760011 CDS YP_004411420.1 330836779 10495125 complement(953195..954433) 1 NC_015436.1 KEGG: dde:Dde_3377 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957114; hypothetical protein 954433 10495125 Spico_0813 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411420.1 953195 R 760011 CDS YP_004411421.1 330836780 10495126 complement(954501..954848) 1 NC_015436.1 KEGG: dap:Dacet_2233 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957115; hypothetical protein 954848 10495126 Spico_0814 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411421.1 954501 R 760011 CDS YP_004411422.1 330836781 10495128 complement(956085..957362) 1 NC_015436.1 InterPro IPR006528; KEGG: mrb:Mrub_1967 phage head morphogenesis protein, SPP1 gp7 family; PFAM: Phage head morphogenesis protein, SPP1 gp7; SPTR: Virion morphogenesis protein; TIGRFAM: Phage head morphogenesis protein, SPP1 gp7; IMG reference gene:2503957117; PFAM: Phage Mu protein F like protein; TIGRFAM: phage head morphogenesis protein, SPP1 gp7 family; phage head morphogenesis protein 957362 10495128 Spico_0816 Sphaerochaeta coccoides DSM 17374 phage head morphogenesis protein YP_004411422.1 956085 R 760011 CDS YP_004411423.1 330836782 10495129 complement(957539..958810) 1 NC_015436.1 COGs: COG4383 Mu-like prophage protein gp29; InterPro IPR009279; KEGG: dap:Dacet_2219 hypothetical protein; PFAM: Protein of unknown function DUF935; SPTR: uncharacterized protein; IMG reference gene:2503957118; PFAM: Protein of unknown function (DUF935); hypothetical protein 958810 10495129 Spico_0817 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411423.1 957539 R 760011 CDS YP_004411424.1 330836783 10495130 complement(958803..960428) 1 NC_015436.1 KEGG: hth:HTH_0882 phage uncharacterized protein; SPTR: Phage uncharacterized protein; IMG reference gene:2503957119; PFAM: Terminase-like family; phage protein 960428 10495130 Spico_0818 Sphaerochaeta coccoides DSM 17374 phage protein YP_004411424.1 958803 R 760011 CDS YP_004411425.1 330836784 10495131 complement(960418..960945) 1 NC_015436.1 KEGG: amt:Amet_1950 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957120; PFAM: Protein of unknown function (DUF3486); hypothetical protein 960945 10495131 Spico_0819 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411425.1 960418 R 760011 CDS YP_004411426.1 330836785 10495132 complement(960947..961249) 1 NC_015436.1 KEGG: hth:HTH_0884 hypothetical protein; SPTR: Predicted protein; IMG reference gene:2503957121; hypothetical protein 961249 10495132 Spico_0820 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411426.1 960947 R 760011 CDS YP_004411427.1 330836786 10495133 complement(961246..961611) 1 NC_015436.1 KEGG: dtu:Dtur_1626 SMC domain protein; SPTR: SMC domain protein; IMG reference gene:2503957122; hypothetical protein 961611 10495133 Spico_0821 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411427.1 961246 R 760011 CDS YP_004411428.1 330836787 10495134 complement(961690..961986) 1 NC_015436.1 KEGG: tel:tll0573 porin; major outer membrane protein; SPTR: Tll0573 protein; IMG reference gene:2503957123; hypothetical protein 961986 10495134 Spico_0822 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411428.1 961690 R 760011 CDS YP_004411429.1 330836788 10495135 complement(962224..962547) 1 NC_015436.1 KEGG: hch:HCH_02233 cell wall biosynthesis glycosyltransferase; SPTR: Glycosyltransferase involved in cell wall biogenesis; IMG reference gene:2503957124; hypothetical protein 962547 10495135 Spico_0823 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411429.1 962224 R 760011 CDS YP_004411430.1 330836789 10495136 962693..963259 1 NC_015436.1 KEGG: emi:Emin_1453 phage-related protein; SPTR: phage-related protein; IMG reference gene:2503957125; hypothetical protein 963259 10495136 Spico_0824 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411430.1 962693 D 760011 CDS YP_004411431.1 330836790 10495137 complement(963306..964334) 1 NC_015436.1 KEGG: zpr:ZPR_0434 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957126; hypothetical protein 964334 10495137 Spico_0825 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411431.1 963306 R 760011 CDS YP_004411432.1 330836791 10495138 complement(964418..964771) 1 NC_015436.1 KEGG: dre:550523 zgc:110200; SPTR: Non-LEE encoded type III effector C; IMG reference gene:2503957127; hypothetical protein 964771 10495138 Spico_0826 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411432.1 964418 R 760011 CDS YP_004411433.1 330836792 10495139 complement(964713..965045) 1 NC_015436.1 KEGG: pth:PTH_2540 phosphoribosylamine-glycine ligase; SPTR: Phosphoribosylamine-glycine ligase; IMG reference gene:2503957128; hypothetical protein 965045 10495139 Spico_0827 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411433.1 964713 R 760011 CDS YP_004411434.1 330836793 10495140 complement(965129..965827) 1 NC_015436.1 COGs: COG2932 transcriptional regulator protein; InterPro IPR001387:IPR019759; KEGG: lhk:LHK_01994 transcriptional regulator; PFAM: Helix-turn-helix type 3; Peptidase S24/S26A/S26B, conserved region; SMART: Helix-turn-helix type 3; SPTR: transcriptional repressor protein; IMG reference gene:2503957129; PFAM: Helix-turn-helix; Peptidase S24-like; phage repressor 965827 10495140 Spico_0828 Sphaerochaeta coccoides DSM 17374 phage repressor YP_004411434.1 965129 R 760011 CDS YP_004411435.1 330836794 10495141 965967..966698 1 NC_015436.1 KEGG: pzu:PHZ_c1565 predicted endonuclease containing a URI domain; SPTR: Predicted endonuclease containing a URI domain; IMG reference gene:2503957130; hypothetical protein 966698 10495141 Spico_0829 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411435.1 965967 D 760011 CDS YP_004411436.1 330836795 10495142 966699..967010 1 NC_015436.1 KEGG: pyo:PY04213 hypothetical protein; SPTR: Death-inducer obliterator 1; IMG reference gene:2503957131; hypothetical protein 967010 10495142 Spico_0830 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411436.1 966699 D 760011 CDS YP_004411437.1 330836796 10495143 complement(966960..967316) 1 NC_015436.1 KEGG: ape:APE_0946 succinate dehydrogenase iron-sulfur subunit; SPTR: Succinate dehydrogenase subunit B; IMG reference gene:2503957132; hypothetical protein 967316 10495143 Spico_0831 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411437.1 966960 R 760011 CDS YP_004411438.1 330836797 10495144 967440..967724 1 NC_015436.1 InterPro IPR001387; KEGG: bfs:BF3179 DNA-binding protein; PFAM: Helix-turn-helix type 3; SPTR: uncharacterized protein; IMG reference gene:2503957133; PFAM: Helix-turn-helix; helix-turn-helix domain-containing protein 967724 10495144 Spico_0832 Sphaerochaeta coccoides DSM 17374 helix-turn-helix domain-containing protein YP_004411438.1 967440 D 760011 CDS YP_004411439.1 330836798 10495145 967724..969826 1 NC_015436.1 KEGG: dbr:Deba_1609 integrase catalytic region; SPTR: uncharacterized protein; IMG reference gene:2503957134; PFAM: Bacteriophage Mu transposase; hypothetical protein 969826 10495145 Spico_0833 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411439.1 967724 D 760011 CDS YP_004411440.1 330836799 10495146 969823..970746 1 NC_015436.1 COGs: COG2842 Uncharacterized ATPase transposase; KEGG: dde:Dde_3351 bacteriophage DNA transposition B protein; SPTR: uncharacterized protein; IMG reference gene:2503957135; hypothetical protein 970746 10495146 Spico_0834 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411440.1 969823 D 760011 CDS YP_004411441.1 330836800 10495147 970721..971182 1 NC_015436.1 KEGG: dde:Dde_3352 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957136; hypothetical protein 971182 10495147 Spico_0835 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411441.1 970721 D 760011 CDS YP_004411442.1 330836801 10495148 971179..971667 1 NC_015436.1 KEGG: rce:RC1_1103 GemA, modulation of host genes; SPTR: uncharacterized protein; IMG reference gene:2503957137; PFAM: Protein of unknown function (DUF1018); hypothetical protein 971667 10495148 Spico_0836 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411442.1 971179 D 760011 CDS YP_004411443.1 330836802 10495149 971664..972281 1 NC_015436.1 KEGG: aat:D11S_0001 sulfate transport protein CysZ; SPTR: sulfate transport protein CysZ; IMG reference gene:2503957138; PFAM: Protein of unknown function (DUF3164); sulfate transport protein CysZ 972281 10495149 Spico_0837 Sphaerochaeta coccoides DSM 17374 sulfate transport protein CysZ YP_004411443.1 971664 D 760011 CDS YP_004411444.1 330836803 10495150 972295..972894 1 NC_015436.1 KEGG: ctc:CTC02237 hypothetical protein; SPTR: Conserved protein; IMG reference gene:2503957139; hypothetical protein 972894 10495150 Spico_0838 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411444.1 972295 D 760011 CDS YP_004411445.1 330836804 10495151 972954..973211 1 NC_015436.1 KEGG: sbi:SORBI_04g009980 hypothetical protein; SPTR: Lantibiotic mersacidin modifying enzyme; IMG reference gene:2503957140; hypothetical protein 973211 10495151 Spico_0839 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411445.1 972954 D 760011 CDS YP_004411446.1 330836805 10495152 973769..973951 1 NC_015436.1 KEGG: cpy:Cphy_3624 hypothetical protein; SPTR: bacteriophage-related protein; IMG reference gene:2503957141; hypothetical protein 973951 10495152 Spico_0840 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411446.1 973769 D 760011 CDS YP_004411447.1 330836806 10495153 complement(974079..974645) 1 NC_015436.1 InterPro IPR002104; KEGG: ssm:Spirs_R0031 integrase; PFAM: Integrase, catalytic core, phage; SPTR: Tn554-related transposase B; IMG reference gene:2503957142; PFAM: Phage integrase; integrase 974645 10495153 Spico_0841 Sphaerochaeta coccoides DSM 17374 integrase YP_004411447.1 974079 R 760011 CDS YP_004411448.1 330836807 10495155 complement(974929..975384) 1 NC_015436.1 InterPro IPR004360; KEGG: str:Sterm_2228 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase; IMG reference gene:2503957144; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; Glyoxalase/bleomycin resistance protein/dioxygenase 975384 10495155 Spico_0842 Sphaerochaeta coccoides DSM 17374 Glyoxalase/bleomycin resistance protein/dioxygenase YP_004411448.1 974929 R 760011 CDS YP_004411449.1 330836808 10495157 975665..976339 1 NC_015436.1 COGs: COG0177 EndoIII-related endonuclease; InterPro IPR003265:IPR003651; KEGG: sta:STHERM_c20610 endonuclease III; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SMART: HhH-GPD domain; SPTR: Endonuclease III; IMG reference gene:2503957146; PFAM: HhH-GPD superfamily base excision DNA repair protein; Iron-sulfur binding domain of endonuclease III; Helix-hairpin-helix motif; TIGRFAM: endonuclease III; DNA-(apurinic or apyrimidinic site) lyase 976339 10495157 Spico_0843 Sphaerochaeta coccoides DSM 17374 DNA-(apurinic or apyrimidinic site) lyase YP_004411449.1 975665 D 760011 CDS YP_004411450.1 330836809 10495158 complement(976364..976777) 1 NC_015436.1 KEGG: ckr:CKR_1799 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957147; hypothetical protein 976777 10495158 Spico_0844 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411450.1 976364 R 760011 CDS YP_004411451.1 330836810 10495159 complement(976875..977441) 1 NC_015436.1 COGs: COG0602 Organic radical activating protein; InterPro IPR007197:IPR012837; KEGG: dhd:Dhaf_0350 anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM; SPTR: Anaerobic ribonucleoside-triphosphate reductase-activating protein; TIGRFAM: Ribonucleoside-triphosphate reductase activating, anaerobic; IMG reference gene:2503957148; PFAM: Radical SAM superfamily; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; anaerobic ribonucleoside-triphosphate reductase activating protein 977441 10495159 Spico_0845 Sphaerochaeta coccoides DSM 17374 anaerobic ribonucleoside-triphosphate reductase activating protein YP_004411451.1 976875 R 760011 CDS YP_004411452.1 330836811 10495160 complement(977451..979808) 1 NC_015436.1 COGs: COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase; InterPro IPR005144:IPR012833; KEGG: aoe:Clos_1144 anaerobic ribonucleoside triphosphate reductase; PFAM: ATP-cone; PRIAM: Ribonucleoside-triphosphate reductase; SPTR: Anaerobic ribonucleoside-triphosphate reductase; TIGRFAM: Ribonucleoside-triphosphate reductase, anaerobic; IMG reference gene:2503957149; PFAM: ATP cone domain; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; ribonucleoside-triphosphate reductase class III catalytic subunit 979808 10495160 Spico_0846 Sphaerochaeta coccoides DSM 17374 ribonucleoside-triphosphate reductase class III catalytic subunit YP_004411452.1 977451 R 760011 CDS YP_004411453.1 330836812 10495161 980368..981516 1 NC_015436.1 COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003439:IPR013611:IPR003593:IPR005893; KEGG: tpp:TPASS_0652 spermidine/putrescine ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; Transport-associated OB, type 2; PRIAM: Polyamine-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Spermidine/putrescine import ATP-binding protein PotA; TIGRFAM: Spermidine/putrescine ABC transporter ATP-binding subunit; IMG reference gene:2503957150; PFAM: ABC transporter; TOBE domain; TIGRFAM: spermidine/putrescine ABC transporter ATP-binding subunit; spermidine/putrescine ABC transporter ATPase 981516 10495161 Spico_0847 Sphaerochaeta coccoides DSM 17374 spermidine/putrescine ABC transporter ATPase YP_004411453.1 980368 D 760011 CDS YP_004411454.1 330836813 10495162 981513..982451 1 NC_015436.1 COGs: COG1176 ABC-type spermidine/putrescine transport system permease component I; InterPro IPR000515; KEGG: tpp:TPASS_0653 spermidine/putrescine ABC transporter, permease; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Spermidine/putrescine transport system permease PotB; IMG reference gene:2503957151; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 982451 10495162 Spico_0848 Sphaerochaeta coccoides DSM 17374 binding-protein-dependent transport system inner membrane protein YP_004411454.1 981513 D 760011 CDS YP_004411455.1 330836814 10495163 982448..983269 1 NC_015436.1 COGs: COG1177 ABC-type spermidine/putrescine transport system permease component II; InterPro IPR000515; KEGG: tpp:TPASS_0654 spermidine/putrescine ABC transporter, permease; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Spermidine/putrescine ABC transporter, permease; IMG reference gene:2503957152; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 983269 10495163 Spico_0849 Sphaerochaeta coccoides DSM 17374 binding-protein-dependent transport system inner membrane protein YP_004411455.1 982448 D 760011 CDS YP_004411456.1 330836815 10495164 983355..984452 1 NC_015436.1 COGs: COG0687 Spermidine/putrescine-binding periplasmic protein; InterPro IPR006059; KEGG: tpp:TPASS_0655 spermidine/putrescine ABC transporter, periplasmic binding protein; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Spermidine/putrescine ABC transporter, periplasmic binding protein; IMG reference gene:2503957153; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein 984452 10495164 Spico_0850 Sphaerochaeta coccoides DSM 17374 ABC transporter substrate-binding protein YP_004411456.1 983355 D 760011 CDS YP_004411457.1 330836816 10495165 complement(984591..985154) 1 NC_015436.1 COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182; KEGG: dhd:Dhaf_2686 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: uncharacterized protein; IMG reference gene:2503957154; PFAM: Acetyltransferase (GNAT) family; N-acetyltransferase GCN5 985154 10495165 Spico_0851 Sphaerochaeta coccoides DSM 17374 N-acetyltransferase GCN5 YP_004411457.1 984591 R 760011 CDS YP_004411458.1 330836817 10495166 985335..986597 1 NC_015436.1 COGs: COG0545 FKBP-type peptidyl-prolyl cis-trans isomerase 1; InterPro IPR000774:IPR001179; KEGG: dol:Dole_1577 peptidylprolyl isomerase FKBP-type; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal; SPTR: Peptidyl-prolyl cis-trans isomerase; IMG reference gene:2503957155; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase; FKBP-type peptidylprolyl isomerase 986597 10495166 Spico_0852 Sphaerochaeta coccoides DSM 17374 FKBP-type peptidylprolyl isomerase YP_004411458.1 985335 D 760011 CDS YP_004411459.1 330836818 10495167 complement(986686..987138) 1 NC_015436.1 COGs: COG2731 Beta-galactosidase beta subunit; InterPro IPR004375; KEGG: sea:SeAg_B4753 cytoplasmic protein; PFAM: Conserved hypothetical protein CHP00022; SPTR: cytoplasmic protein; TIGRFAM: Conserved hypothetical protein CHP00022; IMG reference gene:2503957156; PFAM: Domain of unknown function (DUF386); TIGRFAM: uncharacterized protein, YhcH/YjgK/YiaL family; hypothetical protein 987138 10495167 Spico_0853 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411459.1 986686 R 760011 CDS YP_004411460.1 330836819 10495168 complement(987220..987876) 1 NC_015436.1 KEGG: eel:EUBELI_01147 cytidylate kinase; SPTR: uncharacterized protein; IMG reference gene:2503957157; cytidylate kinase 987876 10495168 Spico_0854 Sphaerochaeta coccoides DSM 17374 cytidylate kinase YP_004411460.1 987220 R 760011 CDS YP_004411461.1 330836820 10495169 complement(988034..989263) 1 NC_015436.1 COGs: COG0373 Glutamyl-tRNA reductase; HAMAP: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; InterPro IPR015895:IPR006151:IPR000343; KEGG: cpy:Cphy_1368 glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; PRIAM: Glutamyl-tRNA reductase; SPTR: uncharacterized protein; IMG reference gene:2503957158; PFAM: Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, N-terminal domain; TIGRFAM: glutamyl-tRNA reductase; glutamyl-tRNA reductase 989263 10495169 Spico_0855 Sphaerochaeta coccoides DSM 17374 glutamyl-tRNA reductase YP_004411461.1 988034 R 760011 CDS YP_004411462.1 330836821 10495170 complement(989491..990294) 1 NC_015436.1 COGs: COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase; InterPro IPR012904:IPR003265; KEGG: cac:CA_C2707 8-oxoguanine-DNA-glycosylase; PFAM: 8-oxoguanine DNA glycosylase, N-terminal; HhH-GPD domain; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SMART: HhH-GPD domain; SPTR: DNA-(Apurinic or apyrimidinic site) lyase; IMG reference gene:2503957159; PFAM: HhH-GPD superfamily base excision DNA repair protein; 8-oxoguanine DNA glycosylase, N-terminal domain; TIGRFAM: 8-oxoguanine DNA-glycosylase (ogg); DNA-(apurinic or apyrimidinic site) lyase 990294 10495170 Spico_0856 Sphaerochaeta coccoides DSM 17374 DNA-(apurinic or apyrimidinic site) lyase YP_004411462.1 989491 R 760011 CDS YP_004411463.1 330836822 10495171 990647..992992 1 NC_015436.1 COGs: COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase synthetase domain; InterPro IPR000728:IPR010918:IPR010074; KEGG: lpa:lpa_02423 phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase-related protein; AIR synthase-related protein, C-terminal; PRIAM: Phosphoribosylformylglycinamidine synthase; SPTR: Phosphoribosylformylglycinamidine synthase II; TIGRFAM: Phosphoribosylformylglycinamidine synthase II; IMG reference gene:2503957160; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase II; phosphoribosylformylglycinamidine synthase subunit II 992992 10495171 Spico_0857 Sphaerochaeta coccoides DSM 17374 phosphoribosylformylglycinamidine synthase subunit II YP_004411463.1 990647 D 760011 CDS YP_004411464.1 330836823 10495172 993011..994126 1 NC_015436.1 COGs: COG0150 Phosphoribosylaminoimidazole (AIR) synthetase; InterPro IPR000728:IPR010918:IPR004733; KEGG: ftn:FTN_0419 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase-related protein, C-terminal; AIR synthase-related protein; PRIAM: Phosphoribosylformylglycinamidine cyclo-ligase; SPTR: Phosphoribosylformylglycinamidine cyclo-ligase; TIGRFAM: Phosphoribosylformylglycinamidine cyclo-ligase; IMG reference gene:2503957161; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase; phosphoribosylformylglycinamidine cyclo-ligase 994126 10495172 Spico_0858 Sphaerochaeta coccoides DSM 17374 phosphoribosylformylglycinamidine cyclo-ligase YP_004411464.1 993011 D 760011 CDS YP_004411465.1 330836824 10495173 994123..995502 1 NC_015436.1 COGs: COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase glutamine amidotransferase domain; InterPro IPR010075; KEGG: lpn:lpg1676 phosphoribosylformylglycinamidine synthase I; PRIAM: Phosphoribosylformylglycinamidine synthase; SPTR: Phosphoribosylformylglycinamidine synthase I; TIGRFAM: Phosphoribosylformylglycinamidine synthase I; IMG reference gene:2503957162; PFAM: Glutamine amidotransferase class-I; TIGRFAM: phosphoribosylformylglycinamidine synthase I; phosphoribosylformylglycinamidine synthase I 995502 10495173 Spico_0859 Sphaerochaeta coccoides DSM 17374 phosphoribosylformylglycinamidine synthase I YP_004411465.1 994123 D 760011 CDS YP_004411466.1 330836825 10495174 995495..996505 1 NC_015436.1 COGs: COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; HAMAP: SAICAR synthetase; InterPro IPR001636; KEGG: lpa:lpa_02418 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; PRIAM: Phosphoribosylaminoimidazolesuccinocarboxamide synthase; SPTR: Phosphoribosylaminoimidazole-succinocarboxamide synthase; IMG reference gene:2503957163; PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase 996505 10495174 Spico_0860 Sphaerochaeta coccoides DSM 17374 phosphoribosylaminoimidazolesuccinocarboxamide synthase YP_004411466.1 995495 D 760011 CDS YP_004411467.1 330836826 10495175 996555..997031 1 NC_015436.1 COGs: COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase; InterPro IPR000031; KEGG: dtu:Dtur_0269 phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: Phosphoribosylaminoimidazole carboxylase, core; SPTR: Phosphoribosylaminoimidazole carboxylase, catalytic subunit; IMG reference gene:2503957164; PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein; 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase 997031 10495175 Spico_0861 Sphaerochaeta coccoides DSM 17374 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase YP_004411467.1 996555 D 760011 CDS YP_004411468.1 330836827 10495176 997019..998488 1 NC_015436.1 COGs: COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase; InterPro IPR000583:IPR000836:IPR005854; KEGG: lpp:lpp1646 amidophosphoribosyltransferase; PFAM: Glutamine amidotransferase, class-II; Phosphoribosyltransferase; PRIAM: Amidophosphoribosyltransferase; SPTR: Amidophosphoribosyltransferase; TIGRFAM: Amidophosphoribosyl transferase; IMG reference gene:2503957165; PFAM: Phosphoribosyl transferase domain; Glutamine amidotransferases class-II; TIGRFAM: amidophosphoribosyltransferase; amidophosphoribosyltransferase 998488 10495176 Spico_0862 Sphaerochaeta coccoides DSM 17374 amidophosphoribosyltransferase YP_004411468.1 997019 D 760011 CDS YP_004411469.1 330836828 10495177 998475..1000451 1 NC_015436.1 COGs: COG0151 Phosphoribosylamine-glycine ligase; HAMAP: Phosphoribosylglycinamide synthetase; InterProIPR020562:IPR020561:IPR020560:IPR002376:IPR 000115; KEGG: pif:PITG_12300 phosphoribosylglycinamide synthetase, PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; Formyl transferase, N-terminal; PRIAM: Phosphoribosylamine--glycine ligase., Phosphoribosylglycinamide formyltransferase; SPTR: Phosphoribosylamine/glycine ligase; TIGRFAM: Phosphoribosylglycinamide synthetase; IMG reference gene:2503957166; PFAM: Phosphoribosylglycinamide synthetase, N domain; Formyl transferase; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase; phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent; Phosphoribosylamine--glycine ligase 1000451 10495177 Spico_0863 Sphaerochaeta coccoides DSM 17374 Phosphoribosylamine--glycine ligase YP_004411469.1 998475 D 760011 CDS YP_004411470.1 330836829 10495178 complement(1000441..1001538) 1 NC_015436.1 KEGG: nmu:Nmul_A0641 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957167; hypothetical protein 1001538 10495178 Spico_0864 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411470.1 1000441 R 760011 CDS YP_004411471.1 330836830 10495179 complement(1001584..1002042) 1 NC_015436.1 COGs: COG0251 translation initiation inhibitor yjgF family; InterPro IPR006175:IPR006056; KEGG: tde:TDE2069 endoribonuclease L-PSP, PFAM: Endoribonuclease L-PSP; SPTR: uncharacterized protein; TIGRFAM: YjgF-like protein; IMG reference gene:2503957168; PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP; endoribonuclease L-PSP 1002042 10495179 Spico_0865 Sphaerochaeta coccoides DSM 17374 endoribonuclease L-PSP YP_004411471.1 1001584 R 760011 CDS YP_004411472.1 330836831 10495180 1002099..1004309 1 NC_015436.1 COGs: COG4225 unsaturated glucuronyl hydrolase involved in regulation of surface properties and related protein; InterPro IPR010905; KEGG: ote:Oter_1360 glycosy hydrolase; PFAM: Glycosyl hydrolase, family 88; SPTR: Glycosyl hydrolase 88; IMG reference gene:2503957169; PFAM: Glycosyl Hydrolase 88; glycosyl hydrolase 88 1004309 10495180 Spico_0866 Sphaerochaeta coccoides DSM 17374 glycosyl hydrolase 88 YP_004411472.1 1002099 D 760011 CDS YP_004411473.1 330836832 10495181 complement(1004378..1005235) 1 NC_015436.1 COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: sta:STHERM_c08200 transporter; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Transporter; IMG reference gene:2503957170; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 2 1005235 10495181 Spico_0867 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter membrane protein 2 YP_004411473.1 1004378 R 760011 CDS YP_004411474.1 330836833 10495182 complement(1005237..1006193) 1 NC_015436.1 COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: sta:STHERM_c08210 transporter; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Transporter; IMG reference gene:2503957171; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 1 1006193 10495182 Spico_0868 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter membrane protein 1 YP_004411474.1 1005237 R 760011 CDS YP_004411475.1 330836834 10495183 complement(1006284..1007573) 1 NC_015436.1 COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: sta:STHERM_c08220 extracellular solute-binding protein, family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein, family 1; IMG reference gene:2503957172; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein 1007573 10495183 Spico_0869 Sphaerochaeta coccoides DSM 17374 ABC transporter substrate-binding protein YP_004411475.1 1006284 R 760011 CDS YP_004411476.1 330836835 10495184 1008055..1009299 1 NC_015436.1 COGs: COG0133 Tryptophan synthase beta chain; HAMAP: Tryptophan synthase beta chain/beta chain-like; InterPro IPR001926:IPR023026:IPR006654; KEGG: pca:Pcar_1244 tryptophan synthase subunit beta; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; PRIAM: Tryptophan synthase; SPTR: Tryptophan synthase subunit beta; TIGRFAM: Tryptophan synthase, beta chain; IMG reference gene:2503957173; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit; tryptophan synthase subunit beta 1009299 10495184 Spico_0870 Sphaerochaeta coccoides DSM 17374 tryptophan synthase subunit beta YP_004411476.1 1008055 D 760011 CDS YP_004411477.1 330836836 10495185 complement(1009398..1010195) 1 NC_015436.1 InterPro IPR021139; KEGG: vpa:VP1078 hypothetical protein; PFAM: Domain of unknown function DUF88; SPTR: uncharacterized protein VP1078; IMG reference gene:2503957174; PFAM: Protein of unknown function DUF88; hypothetical protein 1010195 10495185 Spico_0871 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411477.1 1009398 R 760011 CDS YP_004411478.1 330836837 10495186 complement(1010432..1010890) 1 NC_015436.1 KEGG: cpo:COPRO5265_1058 TM2 domain family protein; SPTR: Predicted membrane protein; IMG reference gene:2503957175; PFAM: TM2 domain; hypothetical protein 1010890 10495186 Spico_0872 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411478.1 1010432 R 760011 CDS YP_004411479.1 330836838 10495187 complement(1010877..1011266) 1 NC_015436.1 KEGG: brm:Bmur_1470 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957176; hypothetical protein 1011266 10495187 Spico_0873 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411479.1 1010877 R 760011 CDS YP_004411480.1 330836839 10495188 complement(1011263..1012339) 1 NC_015436.1 COGs: COG4260 virion core protein (lumpy skin disease virus); KEGG: cce:Ccel_1422 antifreeze protein type I; SPTR: Antifreeze protein type I; IMG reference gene:2503957177; PFAM: SPFH domain / Band 7 family; antifreeze protein type I 1012339 10495188 Spico_0874 Sphaerochaeta coccoides DSM 17374 antifreeze protein type I YP_004411480.1 1011263 R 760011 CDS YP_004411481.1 330836840 10495189 1012725..1014059 1 NC_015436.1 COGs: COG0282 Acetate kinase; HAMAP: Acetate kinase; InterPro IPR000890:IPR004372; KEGG: ssm:Spirs_2158 acetate kinase; PFAM: Acetate/butyrate kinase; PRIAM: Acetate kinase; SPTR: Acetate kinase; TIGRFAM: Acetate kinase; IMG reference gene:2503957178; PFAM: Acetokinase; TIGRFAM: acetate kinase; acetate kinase 1014059 10495189 Spico_0875 Sphaerochaeta coccoides DSM 17374 acetate kinase YP_004411481.1 1012725 D 760011 CDS YP_004411482.1 330836841 10495190 complement(1014131..1014688) 1 NC_015436.1 COGs: COG0693 intracellular protease/amidase; InterPro IPR002818:IPR006287; KEGG: ssm:Spirs_2243 DJ-1 family protein; PFAM: ThiJ/PfpI; SPTR: protease; TIGRFAM: DJ-1; IMG reference gene:2503957179; PFAM: DJ-1/PfpI family; TIGRFAM: DJ-1 family protein; DJ-1 family protein 1014688 10495190 Spico_0876 Sphaerochaeta coccoides DSM 17374 DJ-1 family protein YP_004411482.1 1014131 R 760011 CDS YP_004411483.1 330836842 10495191 complement(1014715..1015791) 1 NC_015436.1 COGs: COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR006218:IPR006219; KEGG: ssm:Spirs_2244 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; PRIAM: 3-deoxy-7-phosphoheptulonate synthase; SPTR: Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive; TIGRFAM: DHAP synthase, class 1; IMG reference gene:2503957180; PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 1015791 10495191 Spico_0877 Sphaerochaeta coccoides DSM 17374 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase YP_004411483.1 1014715 R 760011 CDS YP_004411484.1 330836843 10495192 1015957..1016802 1 NC_015436.1 InterPro IPR019734; KEGG: fgr:FG08956.1 hypothetical protein; SPTR: ATP/GTP binding protein; IMG reference gene:2503957181; hypothetical protein 1016802 10495192 Spico_0878 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411484.1 1015957 D 760011 CDS YP_004411485.1 330836844 10495193 1017106..1018251 1 NC_015436.1 COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: aoe:Clos_2502 extracellular ligand-binding receptor; PFAM: Extracellular ligand-binding receptor; SPTR: Extracellular ligand-binding receptor; IMG reference gene:2503957182; PFAM: Receptor family ligand binding region; amino acid ABC transporter substrate-binding protein 1018251 10495193 Spico_0879 Sphaerochaeta coccoides DSM 17374 amino acid ABC transporter substrate-binding protein YP_004411485.1 1017106 D 760011 CDS YP_004411486.1 330836845 10495194 1018351..1019244 1 NC_015436.1 COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: tjr:TherJR_2668 inner-membrane translocator; PFAM: ABC transporter permease; SPTR: Inner-membrane translocator; IMG reference gene:2503957183; PFAM: Branched-chain amino acid transport system / permease component; amino acid ABC transporter permease 1019244 10495194 Spico_0880 Sphaerochaeta coccoides DSM 17374 amino acid ABC transporter permease YP_004411486.1 1018351 D 760011 CDS YP_004411487.1 330836846 10495195 1019241..1020347 1 NC_015436.1 COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: aoe:Clos_2500 inner-membrane translocator; PFAM: ABC transporter permease; SPTR: Inner-membrane translocator; IMG reference gene:2503957184; PFAM: Branched-chain amino acid transport system / permease component; amino acid ABC transporter permease 1020347 10495195 Spico_0881 Sphaerochaeta coccoides DSM 17374 amino acid ABC transporter permease YP_004411487.1 1019241 D 760011 CDS YP_004411488.1 330836847 10495196 1020344..1021114 1 NC_015436.1 COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: tjr:TherJR_2666 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; IMG reference gene:2503957185; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; amino acid ABC transporter ATP-binding protein 1021114 10495196 Spico_0882 Sphaerochaeta coccoides DSM 17374 amino acid ABC transporter ATP-binding protein YP_004411488.1 1020344 D 760011 CDS YP_004411489.1 330836848 10495197 1021107..1021811 1 NC_015436.1 COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: tjr:TherJR_2665 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: uncharacterized protein; IMG reference gene:2503957186; PFAM: ABC transporter; amino acid ABC transporter ATP-binding protein 1021811 10495197 Spico_0883 Sphaerochaeta coccoides DSM 17374 amino acid ABC transporter ATP-binding protein YP_004411489.1 1021107 D 760011 CDS YP_004411490.1 330836849 10495198 complement(1021901..1023709) 1 NC_015436.1 COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR000873; KEGG: ssm:Spirs_2245 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Long-chain-fatty-acid--CoA ligase; SPTR: AMP-dependent synthetase and ligase; IMG reference gene:2503957187; PFAM: AMP-binding enzyme; long-chain-fatty-acid--CoA ligase 1023709 10495198 Spico_0884 Sphaerochaeta coccoides DSM 17374 long-chain-fatty-acid--CoA ligase YP_004411490.1 1021901 R 760011 CDS YP_004411491.1 330836850 10495199 complement(1023733..1024647) 1 NC_015436.1 COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; InterPro IPR001279; KEGG: ssm:Spirs_2246 hypothetical protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; SPTR: Metallo-beta-lactamase domain protein; IMG reference gene:2503957188; PFAM: Metallo-beta-lactamase superfamily; beta-lactamase domain-containing protein 1024647 10495199 Spico_0885 Sphaerochaeta coccoides DSM 17374 beta-lactamase domain-containing protein YP_004411491.1 1023733 R 760011 CDS YP_004411492.1 330836851 10495200 1024975..1026366 1 NC_015436.1 COGs: COG0017 Aspartyl/asparaginyl-tRNA synthetase; HAMAP: Asparaginyl-tRNA synthetase, class IIb; InterPro IPR004365:IPR004364:IPR004522; KEGG: ssm:Spirs_2248 asparaginyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; PRIAM: Asparagine--tRNA ligase; SPTR: Asparaginyl-tRNA synthetase; TIGRFAM: Asparaginyl-tRNA synthetase, class IIb; IMG reference gene:2503957189; PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: asparaginyl-tRNA synthetase; asparaginyl-tRNA synthetase 1026366 10495200 Spico_0886 Sphaerochaeta coccoides DSM 17374 asparaginyl-tRNA synthetase YP_004411492.1 1024975 D 760011 CDS YP_004411493.1 330836852 10495201 complement(1026352..1026894) 1 NC_015436.1 COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792; KEGG: sen:SACE_1981 protein kinase/LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; SPTR: Protein kinase/transcriptional regulator, LuxR family; IMG reference gene:2503957190; PFAM: Bacterial regulatory proteins, luxR family; LuxR family transcriptional regulator 1026894 10495201 Spico_0887 Sphaerochaeta coccoides DSM 17374 LuxR family transcriptional regulator YP_004411493.1 1026352 R 760011 CDS YP_004411494.1 330836853 10495202 complement(1027047..1027655) 1 NC_015436.1 COGs: COG1671 conserved hypothetical protein; HAMAP: Protein of unknown function DUF188; InterPro IPR003791; KEGG: mxa:MXAN_5526 YaiI/YqxD family protein; PFAM: Protein of unknown function DUF188; SPTR: UPF0178 protein MXAN_5526; IMG reference gene:2503957191; PFAM: Uncharacterized BCR, YaiI/YqxD family COG1671; hypothetical protein 1027655 10495202 Spico_0888 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411494.1 1027047 R 760011 CDS YP_004411495.1 330836854 10495203 1027819..1029477 1 NC_015436.1 COGs: COG0205 6-phosphofructokinase; InterPro IPR000023:IPR011183; KEGG: ssm:Spirs_2255 diphosphate/fructose-6-phosphate1-phosphotransfe rase; PFAM: Phosphofructokinase domain; SPTR: Diphosphate--fructose-6-phosphate 1-phosphotransferase; TIGRFAM: Pyrophosphate-dependent phosphofructokinase PfpB; IMG reference gene:2503957192; PFAM: Phosphofructokinase; TIGRFAM: diphosphate--fructose-6-phosphate 1-phosphotransferase; pyrophosphate-dependent phosphofructokinase 1029477 10495203 Spico_0889 Sphaerochaeta coccoides DSM 17374 pyrophosphate-dependent phosphofructokinase YP_004411495.1 1027819 D 760011 CDS YP_004411496.1 330836855 10495204 1029692..1032211 1 NC_015436.1 COGs: COG3250 Beta-galactosidase/beta-glucuronidase; KEGG: ssm:Spirs_1196 beta-mannosidase; PRIAM: Beta-mannosidase; SPTR: Beta-mannosidase; IMG reference gene:2503957193; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Beta-mannosidase 1032211 10495204 Spico_0890 Sphaerochaeta coccoides DSM 17374 Beta-mannosidase YP_004411496.1 1029692 D 760011 CDS YP_004411497.1 330836856 10495205 1032302..1033504 1 NC_015436.1 COGs: COG1454 Alcohol dehydrogenase class IV; InterPro IPR001670; KEGG: dsy:DSY1101 hypothetical protein; PFAM: Alcohol dehydrogenase, iron-type; PRIAM: Alcohol dehydrogenase; SPTR: uncharacterized protein; IMG reference gene:2503957194; PFAM: Iron-containing alcohol dehydrogenase; alcohol dehydrogenase 1033504 10495205 Spico_0891 Sphaerochaeta coccoides DSM 17374 alcohol dehydrogenase YP_004411497.1 1032302 D 760011 CDS YP_004411498.1 330836857 10495206 1033576..1034952 1 NC_015436.1 COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: dsy:DSY1102 hypothetical protein; PFAM: Aldehyde dehydrogenase domain; SPTR: uncharacterized protein; IMG reference gene:2503957195; PFAM: Aldehyde dehydrogenase; aldehyde dehydrogenase 1034952 10495206 Spico_0892 Sphaerochaeta coccoides DSM 17374 aldehyde dehydrogenase YP_004411498.1 1033576 D 760011 CDS YP_004411499.1 330836858 10495207 complement(1035129..1036478) 1 NC_015436.1 COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: ssm:Spirs_2123 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: bacterial extracellular solute-binding protein; IMG reference gene:2503957196; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein 1036478 10495207 Spico_0893 Sphaerochaeta coccoides DSM 17374 ABC transporter substrate-binding protein YP_004411499.1 1035129 R 760011 CDS YP_004411500.1 330836859 10495208 complement(1036702..1037565) 1 NC_015436.1 COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: ssm:Spirs_2121 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Sugar ABC transporter permease; IMG reference gene:2503957197; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 1037565 10495208 Spico_0894 Sphaerochaeta coccoides DSM 17374 binding-protein-dependent transport system inner membrane protein YP_004411500.1 1036702 R 760011 CDS YP_004411501.1 330836860 10495209 complement(1037568..1038542) 1 NC_015436.1 COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: ssm:Spirs_2122 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Sugar ABC transporter permease; IMG reference gene:2503957198; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 1038542 10495209 Spico_0895 Sphaerochaeta coccoides DSM 17374 binding-protein-dependent transport system inner membrane protein YP_004411501.1 1037568 R 760011 CDS YP_004411502.1 330836861 10495210 complement(1038564..1039829) 1 NC_015436.1 COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: ssm:Spirs_1197 ROK family protein; PFAM: ROK; SPTR: transcriptional regulator; IMG reference gene:2503957199; PFAM: ROK family; ROK family protein 1039829 10495210 Spico_0896 Sphaerochaeta coccoides DSM 17374 ROK family protein YP_004411502.1 1038564 R 760011 CDS YP_004411503.1 330836862 10495211 1039921..1041501 1 NC_015436.1 COGs: COG3525 N-acetyl-beta-hexosaminidase; InterPro IPR015883; KEGG: sli:Slin_4336 beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; PRIAM: Beta-N-acetylhexosaminidase; SPTR: N-acetyl-beta-hexosaminidase; IMG reference gene:2503957200; PFAM: Glycosyl hydrolase 20, catalytic domain; beta-N-acetylhexosaminidase 1041501 10495211 Spico_0897 Sphaerochaeta coccoides DSM 17374 beta-N-acetylhexosaminidase YP_004411503.1 1039921 D 760011 CDS YP_004411504.1 330836863 10495212 complement(1041532..1041834) 1 NC_015436.1 COGs: COG1534 RNA-binding protein containing KH domain possibly ribosomal protein; InterPro IPR001890; KEGG: ssm:Spirs_2265 protein of unknown function UPF0044; PFAM: RNA-binding, CRM domain; SPTR: uncharacterized protein; IMG reference gene:2503957201; PFAM: CRS1 / YhbY (CRM) domain; TIGRFAM: RNA-binding protein, YhbY family; hypothetical protein 1041834 10495212 Spico_0898 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411504.1 1041532 R 760011 CDS YP_004411505.1 330836864 10495213 complement(1041845..1043605) 1 NC_015436.1 COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR000873; KEGG: ssm:Spirs_2267 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Long-chain-fatty-acid--CoA ligase; SPTR: Long-chain-fatty-acid--CoA ligase, ; IMG reference gene:2503957202; PFAM: AMP-binding enzyme; long-chain-fatty-acid--CoA ligase 1043605 10495213 Spico_0899 Sphaerochaeta coccoides DSM 17374 long-chain-fatty-acid--CoA ligase YP_004411505.1 1041845 R 760011 CDS YP_004411506.1 330836865 10495214 1043849..1045231 1 NC_015436.1 COGs: COG0285 Folylpolyglutamate synthase; InterPro IPR013221:IPR004101:IPR001645; KEGG: ssm:Spirs_2271 FolC bifunctional protein; PFAM: Mur ligase, C-terminal; Mur ligase, central; SPTR: Folylpolyglutamate synthetase, ; TIGRFAM: Folylpolyglutamate synthetase; IMG reference gene:2503957203; PFAM: Mur ligase, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 1045231 10495214 Spico_0900 Sphaerochaeta coccoides DSM 17374 bifunctional folylpolyglutamate synthase/ dihydrofolate synthase YP_004411506.1 1043849 D 760011 CDS YP_004411507.1 330836866 10495215 1045222..1046694 1 NC_015436.1 COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP; InterPro IPR008616:IPR008532; KEGG: ssm:Spirs_2274 fibronectin-binding A domain protein; PFAM: Domain of unknown function DUF814; Fibronectin-binding A, N-terminal; SPTR: Fibronectin/fibrinogen-binding protein, internal deletion; IMG reference gene:2503957204; PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA); hypothetical protein 1046694 10495215 Spico_0901 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411507.1 1045222 D 760011 CDS YP_004411508.1 330836867 10495216 1046681..1047595 1 NC_015436.1 KEGG: ttj:TTHA1711 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957205; hypothetical protein 1047595 10495216 Spico_0902 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411508.1 1046681 D 760011 CDS YP_004411509.1 330836868 10495217 1047592..1049076 1 NC_015436.1 KEGG: sta:STHERM_c03340 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957206; hypothetical protein 1049076 10495217 Spico_0903 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411509.1 1047592 D 760011 CDS YP_004411510.1 330836869 10495218 complement(1049061..1049993) 1 NC_015436.1 COGs: COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase; HAMAP: tRNA delta(2)-isopentenylpyrophosphate transferase; InterPro IPR002627:IPR018022; KEGG: sta:STHERM_c12200 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; PRIAM: tRNA isopentenyltransferase; SPTR: tRNA delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; IMG reference gene:2503957207; PFAM: IPP transferase; TIGRFAM: tRNA dimethylallyltransferase; tRNA dimethylallyltransferase 1049993 10495218 Spico_0904 Sphaerochaeta coccoides DSM 17374 tRNA dimethylallyltransferase YP_004411510.1 1049061 R 760011 CDS YP_004411511.1 330836870 10495219 complement(1049983..1050243) 1 NC_015436.1 KEGG: rrs:RoseRS_1675 dehydrogenase catalytic domain-containing protein; SPTR: Predicted protein; IMG reference gene:2503957208; hypothetical protein 1050243 10495219 Spico_0905 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411511.1 1049983 R 760011 CDS YP_004411512.1 330836871 10495220 complement(1050307..1050873) 1 NC_015436.1 COGs: COG1102 Cytidylate kinase; HAMAP: Cytidylate kinase, InterPro IPR011994:IPR011892; KEGG: tde:TDE1087 cytidylate kinase; PFAM: Cytidylate kinase domain; SPTR: Cytidylate kinase; TIGRFAM: Cytidylate kinase, IMG reference gene:2503957209; PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase; cytidylate kinase 1050873 10495220 Spico_0906 Sphaerochaeta coccoides DSM 17374 cytidylate kinase YP_004411512.1 1050307 R 760011 CDS YP_004411513.1 330836872 10495221 complement(1050925..1051794) 1 NC_015436.1 COGs: COG1561 Uncharacterized stress-induced protein; InterPro IPR013527:IPR013551:IPR005229; KEGG: sta:STHERM_c12240 protein YicC; PFAM: Domain of unknown function DUF1732; YicC-like, N-terminal; SPTR: Protein YicC; TIGRFAM: Conserved hypothetical protein CHP00255; IMG reference gene:2503957210; PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: TIGR00255 family protein; hypothetical protein 1051794 10495221 Spico_0907 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411513.1 1050925 R 760011 CDS YP_004411514.1 330836873 10495222 complement(1051791..1053365) 1 NC_015436.1 COGs: COG0773 UDP-N-acetylmuramate-alanine ligase; InterPro IPR000713:IPR013221:IPR004101; KEGG: ssm:Spirs_2282 UDP-N-acetylmuramate/alanine ligase; PFAM: Mur ligase, C-terminal; Mur ligase, central; Mur ligase, N-terminal; PRIAM: UDP-N-acetylmuramate--L-alanine ligase; SPTR: UDP-N-acetylmuramate--L-alanine ligase; IMG reference gene:2503957211; PFAM: Mur ligase, catalytic domain; Mur ligase, glutamate ligase domain; Mur ligase middle domain; UDP-N-acetylmuramate--L-alanine ligase 1053365 10495222 Spico_0908 Sphaerochaeta coccoides DSM 17374 UDP-N-acetylmuramate--L-alanine ligase YP_004411514.1 1051791 R 760011 CDS YP_004411515.1 330836874 10495223 complement(1053362..1054522) 1 NC_015436.1 KEGG: pbe:PB000454.03.0 hypothetical protein; SPTR: Homoserine O-acetyltransferase; IMG reference gene:2503957212; hypothetical protein 1054522 10495223 Spico_0909 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411515.1 1053362 R 760011 CDS YP_004411516.1 330836875 10495224 1054651..1056258 1 NC_015436.1 COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase; HAMAP:UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-di aminopimelateligase; InterPro IPR000713:IPR013221:IPR004101:IPR005761; KEGG: rrs:RoseRS_0794 UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; PRIAM:UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelateligase; SPTR: UDP-N-acetylmuramyl-tripeptide synthetase; TIGRFAM:UDP-N-acetylmuramoylalanyl-D-glutamate-2,6- diaminopimelateligase; IMG reference gene:2503957213; PFAM: Mur ligase, glutamate ligase domain; Mur ligase, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-d iaminopimelate ligase 1056258 10495224 Spico_0910 Sphaerochaeta coccoides DSM 17374 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-d iaminopimelate ligase YP_004411516.1 1054651 D 760011 CDS YP_004411517.1 330836876 10495225 1056255..1057421 1 NC_015436.1 COGs: COG1181 D-alanine-D-alanine ligase and related ATP-grasp protein; HAMAP: D-alanine--D-alanine ligase; InterPro IPR011127:IPR011095:IPR005905; KEGG: ara:Arad_1819 D-alanyl-alanine synthetase A; PFAM: D-alanine--D-alanine ligase, N-terminal; D-alanine--D-alanine ligase, C-terminal; PRIAM: D-alanine--D-alanine ligase; SPTR: D-alanine-D-alanine ligase; IMG reference gene:2503957214; PFAM: D-ala D-ala ligase N-terminus; D-ala D-ala ligase C-terminus; TIGRFAM: D-alanine--D-alanine ligase; D-alanine--D-alanine ligase 1057421 10495225 Spico_0911 Sphaerochaeta coccoides DSM 17374 D-alanine--D-alanine ligase YP_004411517.1 1056255 D 760011 CDS YP_004411518.1 330836877 10495226 1057418..1058632 1 NC_015436.1 COGs: COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; HAMAP: DNA polymerase IV; InterPro IPR001126:IPR022880; KEGG: ssm:Spirs_2898 DNA-directed DNA polymerase; PFAM: DNA-repair protein, UmuC-like; PRIAM: DNA-directed DNA polymerase; SPTR: DNA polymerase IV; IMG reference gene:2503957215; PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; DNA polymerase IV 1058632 10495226 Spico_0912 Sphaerochaeta coccoides DSM 17374 DNA polymerase IV YP_004411518.1 1057418 D 760011 CDS YP_004411519.1 330836878 10495227 1058733..1059251 1 NC_015436.1 COGs: COG0219 rRNA methylase (SpoU class); InterPro IPR001537; KEGG: dae:Dtox_0805 RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase, SpoU; SPTR: uncharacterized protein; IMG reference gene:2503957216; PFAM: SpoU rRNA Methylase; TIGRFAM: rRNA methylase, , group 2; tRNA/rRNA methyltransferase SpoU 1059251 10495227 Spico_0913 Sphaerochaeta coccoides DSM 17374 tRNA/rRNA methyltransferase SpoU YP_004411519.1 1058733 D 760011 CDS YP_004411520.1 330836879 10495228 1059244..1060086 1 NC_015436.1 COGs: COG0345 Pyrroline-5-carboxylate reductase; InterPro IPR004455:IPR000304; KEGG: ssm:Spirs_2903 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; PRIAM: Pyrroline-5-carboxylate reductase; SPTR: Pyrroline-5-carboxylate reductase; TIGRFAM: Pyrroline-5-carboxylate reductase; IMG reference gene:2503957217; PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase; pyrroline-5-carboxylate reductase 1060086 10495228 Spico_0914 Sphaerochaeta coccoides DSM 17374 pyrroline-5-carboxylate reductase YP_004411520.1 1059244 D 760011 CDS YP_004411521.1 330836880 10495229 1060126..1061412 1 NC_015436.1 COGs: COG0172 Seryl-tRNA synthetase; HAMAP: Seryl-tRNA synthetase, class IIa; InterPro IPR015866:IPR002314:IPR002317; KEGG: tde:TDE2307 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Seryl-tRNA synthetase, class IIa, N-terminal; PRIAM: Serine--tRNA ligase; SPTR: Seryl-tRNA synthetase; TIGRFAM: Seryl-tRNA synthetase, class IIa; IMG reference gene:2503957218; PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase; seryl-tRNA synthetase 1061412 10495229 Spico_0915 Sphaerochaeta coccoides DSM 17374 seryl-tRNA synthetase YP_004411521.1 1060126 D 760011 CDS YP_004411522.1 330836881 10495230 1061456..1062898 1 NC_015436.1 COGs: COG1488 Nicotinic acid phosphoribosyltransferase; InterPro IPR015977:IPR006405; KEGG: ssm:Spirs_2906 nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; SPTR: Nicotinate phosphoribosyltransferase; TIGRFAM: Nicotinate phosphoribosyltransferase IMG reference gene:2503957219; PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family; TIGRFAM: nicotinate phosphoribosyltransferase; nicotinate phosphoribosyltransferase 1062898 10495230 Spico_0916 Sphaerochaeta coccoides DSM 17374 nicotinate phosphoribosyltransferase YP_004411522.1 1061456 D 760011 CDS YP_004411523.1 330836882 10495231 complement(1062923..1063696) 1 NC_015436.1 COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: ssm:Spirs_2928 cell wall hydrolase/autolysin; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic; SPTR: N-acetylmuramoyl-L-alanine amidase; IMG reference gene:2503957220; PFAM: N-acetylmuramoyl-L-alanine amidase; cell wall hydrolase/autolysin 1063696 10495231 Spico_0917 Sphaerochaeta coccoides DSM 17374 cell wall hydrolase/autolysin YP_004411523.1 1062923 R 760011 CDS YP_004411524.1 330836883 10495232 complement(1063693..1064613) 1 NC_015436.1 KEGG: ssm:Spirs_2932 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957221; hypothetical protein 1064613 10495232 Spico_0918 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411524.1 1063693 R 760011 CDS YP_004411525.1 330836884 10495233 complement(1064613..1065740) 1 NC_015436.1 COGs: COG0263 Glutamate 5-kinase; HAMAP: Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase; InterPro IPR005715:IPR001048:IPR002478; KEGG: sta:STHERM_c19790 glutamate 5-kinase; PFAM: Aspartate/glutamate/uridylate kinase; Pseudouridine synthase/archaeosine transglycosylase; SMART: Pseudouridine synthase/archaeosine transglycosylase; SPTR: Glutamate 5-kinase; TIGRFAM: Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase; IMG reference gene:2503957222; PFAM: PUA domain; Amino acid kinase; TIGRFAM: glutamate 5-kinase; glutamate 5-kinase 1065740 10495233 Spico_0919 Sphaerochaeta coccoides DSM 17374 glutamate 5-kinase YP_004411525.1 1064613 R 760011 CDS YP_004411526.1 330836885 10495234 complement(1065765..1067099) 1 NC_015436.1 COGs: COG0014 Gamma-glutamyl phosphate reductase; InterPro IPR000965; KEGG: sta:STHERM_c19780 gamma-glutamyl phosphate reductase; PRIAM: Glutamate-5-semialdehyde dehydrogenase; SPTR: Gamma-glutamyl phosphate reductase; TIGRFAM: Gamma-glutamyl phosphate reductase GPR; IMG reference gene:2503957223; PFAM: Aldehyde dehydrogenase; TIGRFAM: gamma-glutamyl phosphate reductase; glutamate-5-semialdehyde dehydrogenase 1067099 10495234 Spico_0920 Sphaerochaeta coccoides DSM 17374 glutamate-5-semialdehyde dehydrogenase YP_004411526.1 1065765 R 760011 CDS YP_004411527.1 330836886 10495235 1067299..1068585 1 NC_015436.1 COGs: COG2252 Permease; InterPro IPR006043; KEGG: bpo:BP951000_1268 integral membrane transport protein; PFAM: Xanthine/uracil/vitamin C permease; SPTR: Integral membrane transport protein; IMG reference gene:2503957224; PFAM: Permease; xanthine/uracil/vitamin C permease 1068585 10495235 Spico_0921 Sphaerochaeta coccoides DSM 17374 xanthine/uracil/vitamin C permease YP_004411527.1 1067299 D 760011 CDS YP_004411528.1 330836887 10495236 1068988..1069470 1 NC_015436.1 KEGG: dps:DP1907 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957225; hypothetical protein 1069470 10495236 Spico_0922 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411528.1 1068988 D 760011 CDS YP_004411529.1 330836888 10495237 1069506..1069922 1 NC_015436.1 KEGG: tpv:TP04_0148 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957226; hypothetical protein 1069922 10495237 Spico_0923 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411529.1 1069506 D 760011 CDS YP_004411530.1 330836889 10495239 1070166..1070981 1 NC_015436.1 COGs: COG0084 Mg-dependent DNase; InterPro IPR001130:IPR015991; KEGG: ssm:Spirs_2388 hydrolase, TatD family; PFAM: Deoxyribonuclease, TatD-related; SPTR: Sec-independent protein translocase TatD; TIGRFAM: Deoxyribonuclease, TatD Mg-dependent, prokaryote; IMG reference gene:2503957228; PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family; TatD family hydrolase 1070981 10495239 Spico_0924 Sphaerochaeta coccoides DSM 17374 TatD family hydrolase YP_004411530.1 1070166 D 760011 CDS YP_004411531.1 330836890 10495240 1071186..1072178 1 NC_015436.1 COGs: COG0191 Fructose/tagatose bisphosphate aldolase; InterPro IPR000771:IPR011289; KEGG: ssm:Spirs_2588 fructose-1,6-bisphosphate aldolase, class II; PFAM: Ketose-bisphosphate aldolase, class-II; PRIAM: Fructose-bisphosphate aldolase; SPTR: uncharacterized protein; TIGRFAM: Fructose-1,6-bisphosphate aldolase, class 2; Ketose-bisphosphate aldolase, class-II; IMG reference gene:2503957229; PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist; fructose-bisphosphate aldolase 1072178 10495240 Spico_0925 Sphaerochaeta coccoides DSM 17374 fructose-bisphosphate aldolase YP_004411531.1 1071186 D 760011 CDS YP_004411532.1 330836891 10495241 complement(1072319..1072891) 1 NC_015436.1 COGs: COG0655 Multimeric flavodoxin WrbA; InterPro IPR005025; KEGG: ccb:Clocel_4239 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR: Iron-sulfur flavoprotein; IMG reference gene:2503957230; PFAM: NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 1072891 10495241 Spico_0926 Sphaerochaeta coccoides DSM 17374 NADPH-dependent FMN reductase YP_004411532.1 1072319 R 760011 CDS YP_004411533.1 330836892 10495242 1073105..1073692 1 NC_015436.1 COGs: COG0290 Translation initiation factor 3 (IF-3); HAMAP: Translation initiation factor 3; InterPro IPR001288:IPR019814:IPR019815; KEGG: ssm:Spirs_2590 translation initiation factor IF-3; PFAM: Translation initiation factor 3, N-terminal; Translation initiation factor 3, C-terminal; SPTR: Translation initiation factor IF-3; TIGRFAM: Translation initiation factor 3; IMG reference gene:2503957231; PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3; translation initiation factor 3 (bIF-3) 1073692 10495242 Spico_0927 Sphaerochaeta coccoides DSM 17374 translation initiation factor 3 (bIF-3) YP_004411533.1 1073105 D 760011 CDS YP_004411534.1 330836893 10495243 1073775..1073972 1 NC_015436.1 HAMAP: Ribosomal protein L35, non-mitochondrial; InterPro IPR001706:IPR021137; KEGG: ssm:Spirs_2591 ribosomal protein L35; PFAM: Ribosomal protein L35; SPTR: 50S ribosomal protein L35; TIGRFAM: Ribosomal protein L35, non-mitochondrial; IMG reference gene:2503957232; PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; 50S ribosomal protein L35 1073972 10495243 Spico_0928 Sphaerochaeta coccoides DSM 17374 50S ribosomal protein L35 YP_004411534.1 1073775 D 760011 CDS YP_004411535.1 330836894 10495244 1073988..1074344 1 NC_015436.1 COGs: COG0292 Ribosomal protein L20; HAMAP: Ribosomal protein L20; InterPro IPR005813; KEGG: ssm:Spirs_2592 ribosomal protein L20; PFAM: Ribosomal protein L20; SPTR: 50S ribosomal protein L20; TIGRFAM: Ribosomal protein L20; IMG reference gene:2503957233; PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20; 50S ribosomal protein L20 1074344 10495244 Spico_0929 Sphaerochaeta coccoides DSM 17374 50S ribosomal protein L20 YP_004411535.1 1073988 D 760011 CDS YP_004411536.1 330836895 10495245 1074394..1074768 1 NC_015436.1 KEGG: tde:TDE2153 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957234; hypothetical protein 1074768 10495245 Spico_0930 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411536.1 1074394 D 760011 CDS YP_004411537.1 330836896 10495246 1075204..1076547 1 NC_015436.1 InterPro IPR001440:IPR019734; KEGG: ssm:Spirs_2596 tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR-1; SPTR: TPR domain protein; IMG reference gene:2503957235; hypothetical protein 1076547 10495246 Spico_0931 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411537.1 1075204 D 760011 CDS YP_004411538.1 330836897 10495247 1076575..1076994 1 NC_015436.1 COGs: COG0802 ATPase or kinase; InterPro IPR003442; KEGG: tde:TDE1469 hypothetical protein; PFAM: Uncharacterised protein family UPF0079, ATPase bacteria; SPTR: uncharacterized protein; TIGRFAM: Uncharacterised protein family UPF0079, ATPase bacteria; IMG reference gene:2503957236; PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family; hypothetical protein 1076994 10495247 Spico_0932 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411538.1 1076575 D 760011 CDS YP_004411539.1 330836898 10495248 1076991..1077689 1 NC_015436.1 COGs: COG1214 Inactive homolog of metal-dependent protease molecular chaperone; InterPro IPR000905:IPR022496; KEGG: ssm:Spirs_2605 peptidase M22 glycoprotease; PFAM: Peptidase M22, glycoprotease; SPTR: Peptidase M22, glycoprotease; TIGRFAM: Conserved hypothetical protein CHP03725, YeaZ; IMG reference gene:2503957237; PFAM: Glycoprotease; TIGRFAM: universal bacterial protein YeaZ; hypothetical protein 1077689 10495248 Spico_0933 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411539.1 1076991 D 760011 CDS YP_004411540.1 330836899 10495249 1077708..1078649 1 NC_015436.1 COGs: COG0492 Thioredoxin reductase; InterPro IPR013027:IPR005982; KEGG: ssm:Spirs_2612 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: Thioredoxin-disulfide reductase; SPTR: Thioredoxin reductase; TIGRFAM: Thioredoxin reductase; IMG reference gene:2503957238; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase; thioredoxin reductase 1078649 10495249 Spico_0934 Sphaerochaeta coccoides DSM 17374 thioredoxin reductase YP_004411540.1 1077708 D 760011 CDS YP_004411541.1 330836900 10495250 1078781..1080247 1 NC_015436.1 COGs: COG0297 Glycogen synthase; HAMAP: Glycogen/starch synthases, ADP-glucose type; InterPro IPR011835:IPR013534:IPR001296; KEGG: gsu:GSU3257 glycogen synthase; PFAM: Starch synthase, catalytic domain; Glycosyl transferase, group 1; PRIAM: Starch synthase; SPTR: Glycogen synthase 2; TIGRFAM: Glycogen/starch synthases, ADP-glucose type; IMG reference gene:2503957239; PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; TIGRFAM: glycogen/starch synthases, ADP-glucose type; Glycogen synthase 1080247 10495250 Spico_0935 Sphaerochaeta coccoides DSM 17374 Glycogen synthase YP_004411541.1 1078781 D 760011 CDS YP_004411542.1 330836901 10495251 1080247..1081542 1 NC_015436.1 COGs: COG0448 ADP-glucose pyrophosphorylase; InterPro IPR005835; KEGG: ssm:Spirs_2619 nucleotidyl transferase; PFAM: Nucleotidyl transferase; PRIAM: Glucose-1-phosphate adenylyltransferase; SPTR: Glucose-1-phosphate adenylyltransferase; IMG reference gene:2503957240; PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; glucose-1-phosphate adenylyltransferase 1081542 10495251 Spico_0936 Sphaerochaeta coccoides DSM 17374 glucose-1-phosphate adenylyltransferase YP_004411542.1 1080247 D 760011 CDS YP_004411543.1 330836902 10495252 complement(1081698..1082162) 1 NC_015436.1 KEGG: ssm:Spirs_2621 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957241; hypothetical protein 1082162 10495252 Spico_0937 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411543.1 1081698 R 760011 CDS YP_004411544.1 330836903 10495253 complement(1082159..1083763) 1 NC_015436.1 COGs: COG0063 sugar kinase; InterPro IPR004443:IPR000631; KEGG: ssm:Spirs_2623 carbohydrate kinase, YjeF related protein; PFAM: YjeF-related protein, N-terminal; Uncharacterised protein family, carbohydrate kinase-related; SPTR: YjeF family protein; TIGRFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal; IMG reference gene:2503957242; PFAM: YjeF-related protein N-terminus; Carbohydrate kinase; TIGRFAM: yjeF N-terminal region; yjeF C-terminal region, hydroxyethylthiazole kinase-related; hypothetical protein 1083763 10495253 Spico_0938 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411544.1 1082159 R 760011 CDS YP_004411545.1 330836904 10495254 1084097..1084510 1 NC_015436.1 InterPro IPR001387; KEGG: dae:Dtox_2429 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator, XRE family; IMG reference gene:2503957243; PFAM: Helix-turn-helix; helix-turn-helix domain-containing protein 1084510 10495254 Spico_0939 Sphaerochaeta coccoides DSM 17374 helix-turn-helix domain-containing protein YP_004411545.1 1084097 D 760011 CDS YP_004411546.1 330836905 10495255 1084670..1085716 1 NC_015436.1 COGs: COG4143 ABC-type thiamine transport system periplasmic component; InterPro IPR006059:IPR005948; KEGG: ssm:Spirs_1695 ABC transporter, periplasmic binding protein, ThiB subfamily; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: ABC-type thiamine transport system, periplasmic component; TIGRFAM: Thiamine ABC transporter periplasmic binding protein; IMG reference gene:2503957244; PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: ABC transporter periplasmic binding protein, thiB subfamily; ABC transporter substrate-binding protein 1085716 10495255 Spico_0940 Sphaerochaeta coccoides DSM 17374 ABC transporter substrate-binding protein YP_004411546.1 1084670 D 760011 CDS YP_004411547.1 330836906 10495256 1085720..1087426 1 NC_015436.1 COGs: COG1178 ABC-type Fe3+ transport system permease component; InterPro IPR000515; KEGG: ssm:Spirs_1694 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Maltooligosaccharide ABC transporter, permease component; IMG reference gene:2503957245; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 1087426 10495256 Spico_0941 Sphaerochaeta coccoides DSM 17374 binding-protein-dependent transport system inner membrane protein YP_004411547.1 1085720 D 760011 CDS YP_004411548.1 330836907 10495257 1087423..1088502 1 NC_015436.1 COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003439:IPR003593; KEGG: hut:Huta_0390 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; IMG reference gene:2503957246; PFAM: ABC transporter; Fe(3+)-transporting ATPase 1088502 10495257 Spico_0942 Sphaerochaeta coccoides DSM 17374 Fe(3+)-transporting ATPase YP_004411548.1 1087423 D 760011 CDS YP_004411549.1 330836908 10495258 complement(1088517..1090652) 1 NC_015436.1 COGs: COG0556 Helicase subunit of the DNA excision repair complex; HAMAP: Excinuclease ABC, B subunit; InterProIPR004807:IPR006935:IPR001650:IPR001943:IPR 014001; KEGG: ssm:Spirs_2331 excinuclease ABC, B subunit; PFAM: Helicase, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; UvrB/UvrC protein; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: UvrABC system protein B; TIGRFAM: Excinuclease ABC, B subunit; IMG reference gene:2503957247; PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit; excinuclease ABC subunit B 1090652 10495258 Spico_0943 Sphaerochaeta coccoides DSM 17374 excinuclease ABC subunit B YP_004411549.1 1088517 R 760011 CDS YP_004411550.1 330836909 10495259 complement(1090668..1091969) 1 NC_015436.1 COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001254:IPR001478; KEGG: ssm:Spirs_2332 peptidase S1 and S6 chymotrypsin/Hap; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; PRIAM: HtrA2 peptidase; SMART: PDZ/DHR/GLGF; SPTR: Periplasmic serine protease DO (HtrA-1); IMG reference gene:2503957248; PFAM: Trypsin; DegP2 peptidase 1091969 10495259 Spico_0944 Sphaerochaeta coccoides DSM 17374 DegP2 peptidase YP_004411550.1 1090668 R 760011 CDS YP_004411551.1 330836910 10495260 complement(1092026..1093168) 1 NC_015436.1 COGs: COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis; InterPro IPR003374; KEGG: tte:TTE2482 thiamine biosynthesis lipoprotein; PFAM: Thiamine synthesis ApbE/UPF0280; SPTR: ApbE family lipoprotein; IMG reference gene:2503957249; PFAM: ApbE family; ApbE family lipoprotein 1093168 10495260 Spico_0945 Sphaerochaeta coccoides DSM 17374 ApbE family lipoprotein YP_004411551.1 1092026 R 760011 CDS YP_004411552.1 330836911 10495261 complement(1093174..1094133) 1 NC_015436.1 COGs: COG0524 Sugar kinase ribokinase; InterPro IPR011611; KEGG: msv:Mesil_1102 PfkB domain protein; PFAM: Carbohydrate/purine kinase; PRIAM: Fructokinase; SPTR: PfkB domain protein; IMG reference gene:2503957250; PFAM: pfkB family carbohydrate kinase; fructokinase 1094133 10495261 Spico_0946 Sphaerochaeta coccoides DSM 17374 fructokinase YP_004411552.1 1093174 R 760011 CDS YP_004411553.1 330836912 10495262 complement(1094143..1094949) 1 NC_015436.1 COGs: COG3294 conserved hypothetical protein; InterPro IPR006674:IPR003607; KEGG: ssm:Spirs_0575 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: uncharacterized protein; IMG reference gene:2503957251; PFAM: HD domain; metal dependent phosphohydrolase 1094949 10495262 Spico_0947 Sphaerochaeta coccoides DSM 17374 metal dependent phosphohydrolase YP_004411553.1 1094143 R 760011 CDS YP_004411554.1 330836913 10495263 1095151..1096878 1 NC_015436.1 COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; HAMAP: Glutaminyl-tRNA synthetase, bacterial; InterPro IPR022861:IPR020058:IPR020059:IPR004514; KEGG: ssm:Spirs_1481 glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain; PRIAM: Glutamine--tRNA ligase; SPTR: Glutaminyl-tRNA synthetase; TIGRFAM: Glutaminyl-tRNA synthetase, class Ic; IMG reference gene:2503957252; PFAM: tRNA synthetases class I (E and Q), catalytic domain; tRNA synthetases class I (E and Q), anti-codon binding domain; TIGRFAM: glutaminyl-tRNA synthetase; glutaminyl-tRNA synthetase 1096878 10495263 Spico_0948 Sphaerochaeta coccoides DSM 17374 glutaminyl-tRNA synthetase YP_004411554.1 1095151 D 760011 CDS YP_004411555.1 330836914 10495264 1096916..1099690 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR000408:IPR011110; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Listeria/Bacterioides repeat; Regulator of chromosome condensation, RCC1; Two component regulator propeller; SPTR: uncharacterized protein; IMG reference gene:2503957253; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; hypothetical protein 1099690 10495264 Spico_0949 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411555.1 1096916 D 760011 CDS YP_004411556.1 330836915 10495265 complement(1099786..1100628) 1 NC_015436.1 InterPro IPR000792; KEGG: rle:RL0075 GerE family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; SPTR: DNA-binding response regulator; IMG reference gene:2503957254; PFAM: Bacterial regulatory proteins, luxR family; LuxR family transcriptional regulator 1100628 10495265 Spico_0950 Sphaerochaeta coccoides DSM 17374 LuxR family transcriptional regulator YP_004411556.1 1099786 R 760011 CDS YP_004411557.1 330836916 10495266 complement(1100861..1101400) 1 NC_015436.1 COGs: COG1592 Rubrerythrin; InterPro IPR003251; KEGG: cpy:Cphy_0524 rubrerythrin; PFAM: Rubrerythrin; SPTR: Rubrerythrin; IMG reference gene:2503957255; PFAM: Rubrerythrin; rubrerythrin 1101400 10495266 Spico_0951 Sphaerochaeta coccoides DSM 17374 rubrerythrin YP_004411557.1 1100861 R 760011 CDS YP_004411558.1 330836917 10495267 complement(1101426..1101836) 1 NC_015436.1 COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: eel:EUBELI_20027 Fur family transcriptional regulator, ferric uptake regulator; PFAM: Ferric-uptake regulator; SPTR: uncharacterized protein; IMG reference gene:2503957256; PFAM: Ferric uptake regulator family; ferric uptake regulator family protein 1101836 10495267 Spico_0952 Sphaerochaeta coccoides DSM 17374 ferric uptake regulator family protein YP_004411558.1 1101426 R 760011 CDS YP_004411559.1 330836918 10495268 complement(1101998..1104595) 1 NC_015436.1 COGs: COG1092 SAM-dependent methyltransferase; KEGG: ssm:Spirs_1479 rRNA (guanine-N(2)-)-methyltransferase; PRIAM: rRNA (guanine-N(2)-)-methyltransferase; SPTR: Ribosomal RNA large subunit methyltransferase L; IMG reference gene:2503957257; PFAM: S-adenosylmethionine-dependent methyltransferase; rRNA (guanine-N(2)-)-methyltransferase 1104595 10495268 Spico_0953 Sphaerochaeta coccoides DSM 17374 rRNA (guanine-N(2)-)-methyltransferase YP_004411559.1 1101998 R 760011 CDS YP_004411560.1 330836919 10495269 1104656..1106461 1 NC_015436.1 COGs: COG5421 Transposase; InterPro IPR002559; KEGG: cob:COB47_1677 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; IMG reference gene:2503957258; PFAM: Transposase DDE domain; transposase IS4 family protein 1106461 10495269 Spico_0954 Sphaerochaeta coccoides DSM 17374 transposase IS4 family protein YP_004411560.1 1104656 D 760011 CDS YP_004411561.1 330836920 10495270 1106778..1107245 1 NC_015436.1 KEGG: ssm:Spirs_1477 hypothetical protein; SPTR: Predicted protein; IMG reference gene:2503957259; hypothetical protein 1107245 10495270 Spico_0955 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411561.1 1106778 D 760011 CDS YP_004411562.1 330836921 10495271 1107249..1108589 1 NC_015436.1 COGs: COG1109 Phosphomannomutase; InterPro IPR005844:IPR005845:IPR005846:IPR005843; KEGG: ssm:Spirs_1476 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; SPTR: Phosphomannomutase; IMG reference gene:2503957260; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I 1108589 10495271 Spico_0956 Sphaerochaeta coccoides DSM 17374 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I YP_004411562.1 1107249 D 760011 CDS YP_004411563.1 330836922 10495272 1108604..1109596 1 NC_015436.1 COGs: COG1087 UDP-glucose 4-epimerase; InterPro IPR001509:IPR005886; KEGG: plt:Plut_0420 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: UDP-glucose 4-epimerase; SPTR: UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; IMG reference gene:2503957261; PFAM: NAD dependent epimerase/dehydratase; TIGRFAM: UDP-glucose-4-epimerase; UDP-galactose 4-epimerase 1109596 10495272 Spico_0957 Sphaerochaeta coccoides DSM 17374 UDP-galactose 4-epimerase YP_004411563.1 1108604 D 760011 CDS YP_004411564.1 330836923 10495273 complement(1109616..1110008) 1 NC_015436.1 COGs: COG1321 Mn-dependent transcriptional regulator protein; InterPro IPR022687:IPR022689; KEGG: apv:Apar_1294 iron (metal) dependent repressor, DtxR family; PFAM: Iron dependent repressor, N-terminal; SMART: Iron dependent repressor, diptheria toxin type; SPTR: uncharacterized protein; IMG reference gene:2503957262; PFAM: Iron dependent repressor, N-terminal DNA binding domain; Iron dependent repressor, N-terminal protein 1110008 10495273 Spico_0958 Sphaerochaeta coccoides DSM 17374 Iron dependent repressor, N-terminal protein YP_004411564.1 1109616 R 760011 CDS YP_004411565.1 330836924 10495274 1110280..1110492 1 NC_015436.1 InterPro IPR007167; KEGG: cbt:CLH_2780 hypothetical protein; PFAM: Ferrous iron transporter, FeoA subunit; SMART: Ferrous iron transporter, FeoA subunit; SPTR: Conserved domain protein; IMG reference gene:2503957263; PFAM: FeoA domain; FeoA family protein 1110492 10495274 Spico_0959 Sphaerochaeta coccoides DSM 17374 FeoA family protein YP_004411565.1 1110280 D 760011 CDS YP_004411566.1 330836925 10495275 1110529..1110765 1 NC_015436.1 COGs: COG1918 Fe2+ transport system protein A; InterPro IPR007167; KEGG: eel:EUBELI_00573 ferrous iron transport protein A; PFAM: Ferrous iron transporter, FeoA subunit; SMART: Ferrous iron transporter, FeoA subunit; SPTR: uncharacterized protein; IMG reference gene:2503957264; PFAM: FeoA domain; FeoA family protein 1110765 10495275 Spico_0960 Sphaerochaeta coccoides DSM 17374 FeoA family protein YP_004411566.1 1110529 D 760011 CDS YP_004411567.1 330836926 10495276 1110762..1112918 1 NC_015436.1 COGs: COG0370 Fe2+ transport system protein B; InterProIPR002917:IPR011619:IPR011642:IPR011640:IPR 005225:IPR003373; KEGG: cbt:CLH_2778 ferrous iron transport protein B; PFAM: GTP-binding protein, HSR1-related; Ferrous iron transport protein B, N-terminal; Nucleoside recognition; Ferrous iron transport protein B, C-terminal; SPTR: Ferrous iron transport protein B; TIGRFAM: Ferrous iron transport protein B; Small GTP-binding protein; IMG reference gene:2503957265; PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain; ferrous iron transport protein B 1112918 10495276 Spico_0961 Sphaerochaeta coccoides DSM 17374 ferrous iron transport protein B YP_004411567.1 1110762 D 760011 CDS YP_004411568.1 330836927 10495277 1112915..1113142 1 NC_015436.1 KEGG: fma:FMG_1212 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957266; hypothetical protein 1113142 10495277 Spico_0962 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411568.1 1112915 D 760011 CDS YP_004411569.1 330836928 10495278 complement(1113338..1113928) 1 NC_015436.1 COGs: COG2249 NADPH-quinone reductase (modulator of drug activity B); InterPro IPR003680; KEGG: cbi:CLJ_B0889 flavodoxin-like fold domain protein; PFAM: Flavodoxin-like fold; SPTR: Flavodoxin-like fold domain protein; IMG reference gene:2503957267; PFAM: Flavodoxin-like fold; NAD(P)H dehydrogenase (quinone) 1113928 10495278 Spico_0963 Sphaerochaeta coccoides DSM 17374 NAD(P)H dehydrogenase (quinone) YP_004411569.1 1113338 R 760011 CDS YP_004411570.1 330836929 10495280 complement(1114496..1117318) 1 NC_015436.1 COGs: COG0737 5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterase; InterPro IPR004843:IPR008334; KEGG: ppy:PPE_01086 5'-nucleotidase/2',3'-cyclic phosphodiesterase; PFAM: 5'-Nucleotidase, C-terminal; Metallo-dependent phosphatase; PRIAM: 5'-nucleotidase; SPTR: 5'-nucleotidase/2',3'-cyclic phosphodiesterase; IMG reference gene:2503957269; PFAM: Calcineurin-like phosphoesterase; 5'-nucleotidase, C-terminal domain; 5'-nucleotidase 1117318 10495280 Spico_0964 Sphaerochaeta coccoides DSM 17374 5'-nucleotidase YP_004411570.1 1114496 R 760011 CDS YP_004411571.1 330836930 10495281 complement(1117587..1117757) 1 NC_015436.1 KEGG: ssm:Spirs_2236 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957270; hypothetical protein 1117757 10495281 Spico_0965 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411571.1 1117587 R 760011 CDS YP_004411572.1 330836931 10495282 1117826..1118263 1 NC_015436.1 COGs: COG0759 conserved hypothetical protein; HAMAP: Protein of unknown function DUF37; InterPro IPR002696; KEGG: lbu:LBUL_0647 hypothetical protein; PFAM: Protein of unknown function DUF37; SPTR: UPF0161 protein HMPREF0044_0040; TIGRFAM: Protein of unknown function DUF37; IMG reference gene:2503957271; PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein YidD; hypothetical protein 1118263 10495282 Spico_0966 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411572.1 1117826 D 760011 CDS YP_004411573.1 330836932 10495283 complement(1118238..1118855) 1 NC_015436.1 COGs: COG0572 Uridine kinase; HAMAP: Uridine kinase; InterPro IPR000764:IPR006083; KEGG: ssm:Spirs_2239 uridine kinase; PFAM: Phosphoribulokinase/uridine kinase; SPTR: Uridine kinase; TIGRFAM: Uridine kinase; IMG reference gene:2503957272; PFAM: Phosphoribulokinase / Uridine kinase; TIGRFAM: uridine kinase; uridine kinase 1118855 10495283 Spico_0967 Sphaerochaeta coccoides DSM 17374 uridine kinase YP_004411573.1 1118238 R 760011 CDS YP_004411574.1 330836933 10495284 complement(1118858..1119934) 1 NC_015436.1 COGs: COG2017 Galactose mutarotase; InterPro IPR008183; KEGG: sta:STHERM_c02560 aldose 1-epimerase; PFAM: Aldose 1-epimerase; PRIAM: Aldose 1-epimerase; SPTR: Aldose 1-epimerase; manually curated; IMG reference gene:2503957273; PFAM: Aldose 1-epimerase; aldose 1-epimerase 1119934 10495284 Spico_0968 Sphaerochaeta coccoides DSM 17374 aldose 1-epimerase YP_004411574.1 1118858 R 760011 CDS YP_004411575.1 330836934 10495285 complement(1119989..1121809) 1 NC_015436.1 COGs: COG0481 Membrane GTPase LepA; HAMAP: GTP-binding protein LepA; InterProIPR006297:IPR000795:IPR004161:IPR000640:IPR 013842:IPR005225; KEGG: ssm:Spirs_1828 GTP-binding protein LepA; PFAM: GTP-binding protein LepA, C-terminal; Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; SPTR: GTP-binding protein lepA; TIGRFAM: GTP-binding protein LepA; Small GTP-binding protein; IMG reference gene:2503957274; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain; GTP-binding protein LepA 1121809 10495285 Spico_0969 Sphaerochaeta coccoides DSM 17374 GTP-binding protein LepA YP_004411575.1 1119989 R 760011 CDS YP_004411576.1 330836935 10495286 complement(1121817..1123793) 1 NC_015436.1 COGs: COG0465 ATP-dependent Zn protease; InterProIPR011546:IPR003959:IPR000642:IPR005936:IPR 003593; KEGG: ssm:Spirs_1817 ATP-dependent metalloprotease FtsH; PFAM: Peptidase M41; ATPase, AAA-type, core; Peptidase M41, FtsH extracellular; PRIAM: Microtubule-severing ATPase; SMART: ATPase, AAA+ type, core; SPTR: Cell division protease FtsH; TIGRFAM: Peptidase M41, FtsH; IMG reference gene:2503957275; PFAM: FtsH Extracellular; Peptidase M41; ATPase associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH; membrane protease FtsH catalytic subunit 1123793 10495286 Spico_0970 Sphaerochaeta coccoides DSM 17374 membrane protease FtsH catalytic subunit YP_004411576.1 1121817 R 760011 CDS YP_004411577.1 330836936 10495287 complement(1123783..1125282) 1 NC_015436.1 COGs: COG0037 ATPase of the PP-loop superfamily protein implicated in cell cycle control; HAMAP: Lysidine-tRNA(Ile) synthetase; InterPro IPR012094:IPR011063:IPR012795:IPR012796; KEGG: ssm:Spirs_1816 tRNA(Ile)-lysidine synthetase; PFAM: tRNA(Ile)-lysidine/2-thiocytidine synthase; SMART: Lysidine-tRNA(Ile) synthetase, C-terminal; SPTR: tRNA(Ile)-lysidine synthase; TIGRFAM: Lysidine-tRNA(Ile) synthetase, N-terminal; Lysidine-tRNA(Ile) synthetase, C-terminal; IMG reference gene:2503957276; PFAM: PP-loop family; TIGRFAM: tRNA(Ile)-lysidine synthetase, C-terminal domain; tRNA(Ile)-lysidine synthetase, N-terminal domain; tRNA(Ile)-lysidine synthase 1125282 10495287 Spico_0971 Sphaerochaeta coccoides DSM 17374 tRNA(Ile)-lysidine synthase YP_004411577.1 1123783 R 760011 CDS YP_004411578.1 330836937 10495288 complement(1125254..1125832) 1 NC_015436.1 COGs: COG0193 Peptidyl-tRNA hydrolase; InterPro IPR001328; KEGG: ssm:Spirs_1815 peptidyl-tRNA hydrolase; PFAM: Peptidyl-tRNA hydrolase; PRIAM: Aminoacyl-tRNA hydrolase; SPTR: Peptidyl-tRNA hydrolase; TIGRFAM: Peptidyl-tRNA hydrolase; IMG reference gene:2503957277; PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 1125832 10495288 Spico_0972 Sphaerochaeta coccoides DSM 17374 peptidyl-tRNA hydrolase YP_004411578.1 1125254 R 760011 CDS YP_004411579.1 330836938 10495289 complement(1125865..1126497) 1 NC_015436.1 COGs: COG1825 Ribosomal protein L25 (general stress protein Ctc); HAMAP: Ribosomal protein L25, long-form; InterPro IPR001021:IPR020055; KEGG: tde:TDE1340 50S ribosomal protein L25/general stress protein Ctc; PFAM: Ribosomal protein L25, short-form; SPTR: 50S ribosomal protein L25; TIGRFAM: Ribosomal protein L25, long-form; IMG reference gene:2503957278; PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form; 50S ribosomal protein L25 1126497 10495289 Spico_0973 Sphaerochaeta coccoides DSM 17374 50S ribosomal protein L25 YP_004411579.1 1125865 R 760011 CDS YP_004411580.1 330836939 10495290 complement(1126672..1127604) 1 NC_015436.1 COGs: COG2768 Uncharacterized Fe-S center protein; KEGG: afn:Acfer_0536 uncharacterized Fe-S center protein; SPTR: uncharacterized protein; manually curated; IMG reference gene:2503957279; Fe-S center protein 1127604 10495290 Spico_0974 Sphaerochaeta coccoides DSM 17374 Fe-S center protein YP_004411580.1 1126672 R 760011 CDS YP_004411581.1 330836940 10495292 complement(1128044..1128334) 1 NC_015436.1 COGs: COG2088 Uncharacterized protein involved in the regulation of septum location; HAMAP: septation protein spoVG; InterPro IPR007170; KEGG: ccb:Clocel_3809 SpoVG family protein; PFAM: Sporulation stage V, protein G; SPTR: SpoVG family protein; IMG reference gene:2503957281; PFAM: SpoVG; septation protein spoVG 1128334 10495292 Spico_0975 Sphaerochaeta coccoides DSM 17374 septation protein spoVG YP_004411581.1 1128044 R 760011 CDS YP_004411582.1 330836941 10495293 complement(1128383..1129336) 1 NC_015436.1 COGs: COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase; HAMAP: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; InterPro IPR004424:IPR006204; KEGG: sta:STHERM_c10370 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; SPTR: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; IMG reference gene:2503957282; PFAM: GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1129336 10495293 Spico_0976 Sphaerochaeta coccoides DSM 17374 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_004411582.1 1128383 R 760011 CDS YP_004411583.1 330836942 10495294 complement(1129300..1130070) 1 NC_015436.1 InterPro IPR005122; KEGG: azo:azo3976 uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase-like; SPTR: Probable uracil-DNA glycosylase; IMG reference gene:2503957283; PFAM: Uracil DNA glycosylase superfamily; uracil-DNA glycosylase 1130070 10495294 Spico_0977 Sphaerochaeta coccoides DSM 17374 uracil-DNA glycosylase YP_004411583.1 1129300 R 760011 CDS YP_004411584.1 330836943 10495295 1130357..1132105 1 NC_015436.1 COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR000873; KEGG: ssm:Spirs_3134 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Long-chain-fatty-acid--CoA ligase; SPTR: long-chain-fatty-acid--CoA ligase; IMG reference gene:2503957284; PFAM: AMP-binding enzyme; long-chain-fatty-acid--CoA ligase 1132105 10495295 Spico_0978 Sphaerochaeta coccoides DSM 17374 long-chain-fatty-acid--CoA ligase YP_004411584.1 1130357 D 760011 CDS YP_004411585.1 330836944 10495296 1132166..1133452 1 NC_015436.1 COGs: COG0402 Cytosine deaminase and related metal-dependent hydrolase; InterPro IPR006680; KEGG: ssm:Spirs_1424 amidohydrolase; PFAM: Amidohydrolase 1; PRIAM: S-adenosylhomocysteine deaminase; SPTR: Amidohydrolase; IMG reference gene:2503957285; PFAM: Amidohydrolase; S-adenosylhomocysteine deaminase 1133452 10495296 Spico_0979 Sphaerochaeta coccoides DSM 17374 S-adenosylhomocysteine deaminase YP_004411585.1 1132166 D 760011 CDS YP_004411586.1 330836945 10495297 complement(1133585..1134841) 1 NC_015436.1 COGs: COG0162 Tyrosyl-tRNA synthetase; HAMAP: Tyrosyl-tRNA synthetase, class Ib; InterPro IPR002307:IPR002305; KEGG: ssm:Spirs_3153 tyrosyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib; PRIAM: Tyrosine--tRNA ligase; SPTR: Tyrosyl-tRNA synthetase; TIGRFAM: Tyrosyl-tRNA synthetase, class Ib; IMG reference gene:2503957286; PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase; tyrosyl-tRNA synthetase 1134841 10495297 Spico_0980 Sphaerochaeta coccoides DSM 17374 tyrosyl-tRNA synthetase YP_004411586.1 1133585 R 760011 CDS YP_004411587.1 330836946 10495298 complement(1134843..1136177) 1 NC_015436.1 COGs: COG0423 Glycyl-tRNA synthetase (class II); InterPro IPR002314:IPR004154:IPR002315; KEGG: ssm:Spirs_3154 glycyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Anticodon-binding; SPTR: Glycyl-tRNA synthetase; TIGRFAM: Glycyl-tRNA synthetase, alpha2 dimer; IMG reference gene:2503957287; PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: glycyl-tRNA synthetase, dimeric type; glycyl-tRNA synthetase 1136177 10495298 Spico_0981 Sphaerochaeta coccoides DSM 17374 glycyl-tRNA synthetase YP_004411587.1 1134843 R 760011 CDS YP_004411588.1 330836947 10495299 complement(1136170..1137663) 1 NC_015436.1 COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; InterPro IPR020058:IPR004527; KEGG: ssm:Spirs_3155 glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; PRIAM: Glutamate--tRNA ligase; SPTR: Glutamyl-tRNA synthetase; TIGRFAM: Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial; IMG reference gene:2503957288; PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family; glutamyl-tRNA synthetase 1137663 10495299 Spico_0982 Sphaerochaeta coccoides DSM 17374 glutamyl-tRNA synthetase YP_004411588.1 1136170 R 760011 CDS YP_004411589.1 330836948 10495300 complement(1137753..1138583) 1 NC_015436.1 COGs: COG1647 Esterase/lipase; KEGG: pmo:Pmob_0119 carboxylesterase, SPTR: Carboxylesterase, ; IMG reference gene:2503957289; hypothetical protein 1138583 10495300 Spico_0983 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411589.1 1137753 R 760011 CDS YP_004411590.1 330836949 10495301 complement(1138587..1139486) 1 NC_015436.1 COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792; KEGG: bpo:BP951000_1223 two-component system regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; SPTR: Two-component system regulator; IMG reference gene:2503957290; PFAM: Bacterial regulatory proteins, luxR family; LuxR family transcriptional regulator 1139486 10495301 Spico_0984 Sphaerochaeta coccoides DSM 17374 LuxR family transcriptional regulator YP_004411590.1 1138587 R 760011 CDS YP_004411591.1 330836950 10495302 complement(1139495..1140136) 1 NC_015436.1 KEGG: lsp:Bsph_1275 abortive phage resistance protein, SPTR: Abortive phage resistance protein, ; IMG reference gene:2503957291; hypothetical protein 1140136 10495302 Spico_0985 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411591.1 1139495 R 760011 CDS YP_004411592.1 330836951 10495303 complement(1140126..1141388) 1 NC_015436.1 KEGG: cyh:Cyan8802_0995 RloA protein; SPTR: RloA protein; IMG reference gene:2503957292; hypothetical protein 1141388 10495303 Spico_0986 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411592.1 1140126 R 760011 CDS YP_004411593.1 330836952 10495304 complement(1141762..1142832) 1 NC_015436.1 KEGG: ssm:Spirs_0126 hypothetical protein; SPTR: Vacuolar protein sorting-associated protein 13 family protein; IMG reference gene:2503957293; hypothetical protein 1142832 10495304 Spico_0987 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411593.1 1141762 R 760011 CDS YP_004411594.1 330836953 10495305 1143071..1143358 1 NC_015436.1 KEGG: bwe:BcerKBAB4_5427 ATPase; SPTR: Aspartic acid-rich protein aspolin2-2; IMG reference gene:2503957294; ATPase 1143358 10495305 Spico_0988 Sphaerochaeta coccoides DSM 17374 ATPase YP_004411594.1 1143071 D 760011 CDS YP_004411595.1 330836954 10495306 1143746..1146121 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Listeria/Bacterioides repeat; SPTR: Alpha-tubulin suppressor and related RCC1 domain-containing protein-like protein; IMG reference gene:2503957295; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; hypothetical protein 1146121 10495306 Spico_0989 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411595.1 1143746 D 760011 CDS YP_004411596.1 330836955 10495308 1146757..1147770 1 NC_015436.1 COGs: COG2984 ABC-type uncharacterized transport system periplasmic component; InterPro IPR007487; KEGG: gem:GM21_0736 protein of unknown function DUF534; PFAM: ABC transporter substrate binding protein; SPTR: uncharacterized protein; IMG reference gene:2503957297; PFAM: ABC transporter substrate binding protein; ABC transporter substrate-binding protein 1147770 10495308 Spico_0991 Sphaerochaeta coccoides DSM 17374 ABC transporter substrate-binding protein YP_004411596.1 1146757 D 760011 CDS YP_004411597.1 330836956 10495309 1147920..1148942 1 NC_015436.1 COGs: COG2984 ABC-type uncharacterized transport system periplasmic component; InterPro IPR007487; KEGG: dat:HRM2_37760 ABC-type transporter, periplasmic substrate binding protein; PFAM: ABC transporter substrate binding protein; SPTR: ABC-type transporter, periplasmic substrate binding protein; IMG reference gene:2503957298; PFAM: ABC transporter substrate binding protein; ABC transporter substrate-binding protein 1148942 10495309 Spico_0992 Sphaerochaeta coccoides DSM 17374 ABC transporter substrate-binding protein YP_004411597.1 1147920 D 760011 CDS YP_004411598.1 330836957 10495310 1148968..1149981 1 NC_015436.1 COGs: COG2984 ABC-type uncharacterized transport system periplasmic component; InterPro IPR007487; KEGG: gsu:GSU0210 hypothetical protein; PFAM: ABC transporter substrate binding protein; SPTR: uncharacterized protein; IMG reference gene:2503957299; PFAM: ABC transporter substrate binding protein; ABC transporter substrate-binding protein 1149981 10495310 Spico_0993 Sphaerochaeta coccoides DSM 17374 ABC transporter substrate-binding protein YP_004411598.1 1148968 D 760011 CDS YP_004411599.1 330836958 10495311 1150062..1151024 1 NC_015436.1 COGs: COG4120 ABC-type uncharacterized transport system permease component; InterPro IPR001851; KEGG: dat:HRM2_37770 ABC-type transporter, permease component; PFAM: ABC transporter permease; SPTR: ABC-type transporter, permease component; IMG reference gene:2503957300; PFAM: Branched-chain amino acid transport system / permease component; inner-membrane translocator 1151024 10495311 Spico_0994 Sphaerochaeta coccoides DSM 17374 inner-membrane translocator YP_004411599.1 1150062 D 760011 CDS YP_004411600.1 330836959 10495312 1151017..1151805 1 NC_015436.1 COGs: COG1101 ABC-type uncharacterized transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: gbm:Gbem_0725 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; IMG reference gene:2503957301; PFAM: ABC transporter; phosphonate-transporting ATPase 1151805 10495312 Spico_0995 Sphaerochaeta coccoides DSM 17374 phosphonate-transporting ATPase YP_004411600.1 1151017 D 760011 CDS YP_004411601.1 330836960 10495313 1151845..1153206 1 NC_015436.1 COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: cpy:Cphy_1252 MATE efflux family protein; PFAM: Multi antimicrobial extrusion protein; SPTR: efflux protein, MATE family; TIGRFAM: Multi antimicrobial extrusion protein; IMG reference gene:2503957302; PFAM: MatE; TIGRFAM: efflux protein, MATE family; MATE efflux family protein 1153206 10495313 Spico_0996 Sphaerochaeta coccoides DSM 17374 MATE efflux family protein YP_004411601.1 1151845 D 760011 CDS YP_004411602.1 330836961 10495314 complement(1153253..1153636) 1 NC_015436.1 COGs: COG0799 Iojap protein; InterPro IPR004394; KEGG: ssm:Spirs_1809 iojap-related protein; PFAM: Ribosome-associated, Iojap-like; SPTR: Iojap domain protein; TIGRFAM: Ribosome-associated, Iojap-like; IMG reference gene:2503957303; PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein; iojap family protein 1153636 10495314 Spico_0997 Sphaerochaeta coccoides DSM 17374 iojap family protein YP_004411602.1 1153253 R 760011 CDS YP_004411603.1 330836962 10495315 complement(1153633..1154298) 1 NC_015436.1 KEGG: cpi:Cpin_5296 beta-ketoacyl synthase; SPTR: Central motor kinesin 1; IMG reference gene:2503957304; hypothetical protein 1154298 10495315 Spico_0998 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411603.1 1153633 R 760011 CDS YP_004411604.1 330836963 10495316 complement(1154295..1154897) 1 NC_015436.1 COGs: COG1713 HD superfamily hydrolase involved in NAD metabolism; InterPro IPR006674; KEGG: rxy:Rxyl_2559 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SPTR: Metal dependent phosphohydrolase; IMG reference gene:2503957305; metal dependent phosphohydrolase 1154897 10495316 Spico_0999 Sphaerochaeta coccoides DSM 17374 metal dependent phosphohydrolase YP_004411604.1 1154295 R 760011 CDS YP_004411605.1 330836964 10495317 complement(1154866..1155507) 1 NC_015436.1 COGs: COG1057 Nicotinic acid mononucleotide adenylyltransferase; HAMAP: Probable nicotinate-nucleotide adenylyltransferase; InterPro IPR005248:IPR004820:IPR004821; KEGG: tpp:TPASS_0741 hypothetical protein; PFAM: Cytidylyltransferase; SPTR: Probable nicotinate-nucleotide adenylyltransferase; TIGRFAM: Probable nicotinate-nucleotide adenylyltransferase; Cytidyltransferase-related; IMG reference gene:2503957306; PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain; nicotinate-nucleotide adenylyltransferase 1155507 10495317 Spico_1000 Sphaerochaeta coccoides DSM 17374 nicotinate-nucleotide adenylyltransferase YP_004411605.1 1154866 R 760011 CDS YP_004411606.1 330836965 10495318 complement(1155529..1156623) 1 NC_015436.1 COGs: COG0536 GTPase; HAMAP: GTP-binding protein Obg/CgtA; InterPro IPR014100:IPR006169:IPR002917; KEGG: ssm:Spirs_1805 GTP-binding protein Obg/CgtA; PFAM: GTP1/OBG subdomain; GTP-binding protein, HSR1-related; SPTR: GTPase obg; TIGRFAM: GTP-binding protein Obg/CgtA; IMG reference gene:2503957307; PFAM: GTPase of unknown function; GTP1/OBG; TIGRFAM: Obg family GTPase CgtA; GTPase ObgE 1156623 10495318 Spico_1001 Sphaerochaeta coccoides DSM 17374 GTPase ObgE YP_004411606.1 1155529 R 760011 CDS YP_004411607.1 330836966 10495319 complement(1156665..1156916) 1 NC_015436.1 COGs: COG0211 Ribosomal protein L27; HAMAP: Ribosomal protein L27; InterPro IPR001684; KEGG: sta:STHERM_c10280 50S ribosomal protein L27; PFAM: Ribosomal protein L27; SPTR: 50S ribosomal protein L27; TIGRFAM: Ribosomal protein L27; IMG reference gene:2503957308; PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27; 50S ribosomal protein L27 1156916 10495319 Spico_1002 Sphaerochaeta coccoides DSM 17374 50S ribosomal protein L27 YP_004411607.1 1156665 R 760011 CDS YP_004411608.1 330836967 10495320 complement(1156929..1157246) 1 NC_015436.1 COGs: COG0261 Ribosomal protein L21; HAMAP: Ribosomal protein L21; InterPro IPR001787; KEGG: ssm:Spirs_1802 ribosomal protein L21; PFAM: Ribosomal protein L21; SPTR: 50S ribosomal protein L21; TIGRFAM: Ribosomal protein L21; IMG reference gene:2503957309; PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21; 50S ribosomal protein L21 1157246 10495320 Spico_1003 Sphaerochaeta coccoides DSM 17374 50S ribosomal protein L21 YP_004411608.1 1156929 R 760011 CDS YP_004411609.1 330836968 10495321 1157430..1158017 1 NC_015436.1 InterPro IPR001647; KEGG: mpd:MCP_0597 TetR family transcriptional regulator; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator; IMG reference gene:2503957310; PFAM: Bacterial regulatory proteins, tetR family; TetR family transcriptional regulator 1158017 10495321 Spico_1004 Sphaerochaeta coccoides DSM 17374 TetR family transcriptional regulator YP_004411609.1 1157430 D 760011 CDS YP_004411610.1 330836969 10495322 complement(1158032..1159795) 1 NC_015436.1 COGs: COG0018 Arginyl-tRNA synthetase; HAMAP: Arginyl-tRNA synthetase, class Ic; InterPro IPR001278:IPR005148:IPR015945:IPR008909; KEGG: ssm:Spirs_1801 arginyl-tRNA synthetase; PFAM: Arginyl-tRNA synthetase, class Ic, core; Arginyl tRNA synthetase, class Ic, N-terminal; DALR anticodon binding; PRIAM: Arginine--tRNA ligase; SMART: DALR anticodon binding; SPTR: uncharacterized protein; TIGRFAM: Arginyl-tRNA synthetase, class Ic; IMG reference gene:2503957311; PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase; arginyl-tRNA synthetase 1159795 10495322 Spico_1005 Sphaerochaeta coccoides DSM 17374 arginyl-tRNA synthetase YP_004411610.1 1158032 R 760011 CDS YP_004411611.1 330836970 10495323 complement(1159865..1160851) 1 NC_015436.1 COGs: COG0340 Biotin-(acetyl-CoA carboxylase) ligase; InterPro IPR013196:IPR004143:IPR004408; KEGG: cpy:Cphy_2779 biotin--acetyl-CoA-carboxylase ligase; PFAM: Biotin/lipoate A/B protein ligase; Helix-turn-helix, type 11; SPTR: Biotin--acetyl-CoA-carboxylase ligase; TIGRFAM: Biotin--acetyl-CoA-carboxylase ligase; IMG reference gene:2503957312; PFAM: HTH domain; Biotin/lipoate A/B protein ligase; TIGRFAM: BirA biotin operon repressor domain; birA, biotin-[acetyl-CoA-carboxylase] ligase region; biotin--acetyl-CoA-carboxylase ligase 1160851 10495323 Spico_1006 Sphaerochaeta coccoides DSM 17374 biotin--acetyl-CoA-carboxylase ligase YP_004411611.1 1159865 R 760011 CDS YP_004411612.1 330836971 10495324 1161049..1161627 1 NC_015436.1 COGs: COG1268 conserved hypothetical protein; InterPro IPR003784; KEGG: sta:STHERM_c14470 biotin synthesis protein BioY; PFAM: BioY protein; SPTR: Biotin synthesis protein BioY; IMG reference gene:2503957313; PFAM: BioY family; BioY protein 1161627 10495324 Spico_1007 Sphaerochaeta coccoides DSM 17374 BioY protein YP_004411612.1 1161049 D 760011 CDS YP_004411613.1 330836972 10495325 1161675..1162634 1 NC_015436.1 COGs: COG1045 Serine acetyltransferase; InterPro IPR001451; KEGG: ssm:Spirs_1684 serine O-acetyltransferase; PFAM: Bacterial transferase hexapeptide repeat; PRIAM: Serine O-acetyltransferase; SPTR: uncharacterized protein; IMG reference gene:2503957314; TIGRFAM: serine O-acetyltransferase; Serine O-acetyltransferase 1162634 10495325 Spico_1008 Sphaerochaeta coccoides DSM 17374 Serine O-acetyltransferase YP_004411613.1 1161675 D 760011 CDS YP_004411614.1 330836973 10495326 complement(1162665..1164026) 1 NC_015436.1 COGs: COG0621 2-methylthioadenine synthetase; InterProIPR013848:IPR007197:IPR005839:IPR006467:IPR 006638; KEGG: ssm:Spirs_1516 MiaB-like tRNA modifying enzyme; PFAM: Radical SAM; Methylthiotransferase, N-terminal; SMART: Elongator protein 3/MiaB/NifB; SPTR: uncharacterized protein; TIGRFAM: MiaB-like tRNA modifying enzyme; Methylthiotransferase; IMG reference gene:2503957315; PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme; radical SAM methylthiotransferase, MiaB/RimO family; MiaB-like tRNA modifying enzyme 1164026 10495326 Spico_1009 Sphaerochaeta coccoides DSM 17374 MiaB-like tRNA modifying enzyme YP_004411614.1 1162665 R 760011 CDS YP_004411615.1 330836974 10495327 complement(1164023..1164838) 1 NC_015436.1 COGs: COG0287 Prephenate dehydrogenase; InterPro IPR003099; KEGG: ssm:Spirs_1513 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase; SPTR: Arogenate dehydrogenase 2; IMG reference gene:2503957316; PFAM: Prephenate dehydrogenase; prephenate dehydrogenase 1164838 10495327 Spico_1010 Sphaerochaeta coccoides DSM 17374 prephenate dehydrogenase YP_004411615.1 1164023 R 760011 CDS YP_004411616.1 330836975 10495328 1164956..1165954 1 NC_015436.1 COGs: COG0280 Phosphotransacetylase; InterPro IPR002505:IPR004614; KEGG: ssm:Spirs_1512 phosphate acetyltransferase; PFAM: Phosphate acetyl/butaryl transferase; PRIAM: Phosphate acetyltransferase; SPTR: Phosphate acetyltransferase; TIGRFAM: Phosphate acetyltransferase; IMG reference gene:2503957317; PFAM: Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate acetyltransferase; phosphotransacetylase 1165954 10495328 Spico_1011 Sphaerochaeta coccoides DSM 17374 phosphotransacetylase YP_004411616.1 1164956 D 760011 CDS YP_004411617.1 330836976 10495329 1166317..1167762 1 NC_015436.1 COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: cac:CA_C3444 cation efflux pump (multidrug resistance protein); PFAM: Multi antimicrobial extrusion protein; SPTR: uncharacterized protein; TIGRFAM: Multi antimicrobial extrusion protein; IMG reference gene:2503957318; PFAM: MatE; TIGRFAM: efflux protein, MATE family; MATE efflux family protein 1167762 10495329 Spico_1012 Sphaerochaeta coccoides DSM 17374 MATE efflux family protein YP_004411617.1 1166317 D 760011 CDS YP_004411618.1 330836977 10495330 complement(1167746..1168621) 1 NC_015436.1 COGs: COG0030 Dimethyladenosine transferase (rRNA methylation); HAMAP: Ribosomal RNA adenine dimethylase; InterPro IPR011530:IPR001737:IPR020598; KEGG: tde:TDE1080 dimethyladenosine transferase; PFAM: Ribosomal RNA adenine methylase transferase; SMART: Ribosomal RNA adenine methylase transferase, N-terminal; SPTR: Ribosomal RNA small subunit methyltransferase A; TIGRFAM: Ribosomal RNA adenine dimethylase; IMG reference gene:2503957319; PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase; ribosomal RNA small subunit methyltransferase A 1168621 10495330 Spico_1013 Sphaerochaeta coccoides DSM 17374 ribosomal RNA small subunit methyltransferase A YP_004411618.1 1167746 R 760011 CDS YP_004411619.1 330836978 10495332 1169749..1169997 1 NC_015436.1 KEGG: mcc:698537 one cut homeobox 2; SPTR: uncharacterized protein; manually curated; IMG reference gene:2503957321; hypothetical protein 1169997 10495332 Spico_1015 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411619.1 1169749 D 760011 CDS YP_004411620.1 330836979 10495333 complement(1170288..1171073) 1 NC_015436.1 KEGG: ssm:Spirs_1495 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957322; hypothetical protein 1171073 10495333 Spico_1016 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411620.1 1170288 R 760011 CDS YP_004411621.1 330836980 10495334 complement(1171098..1172870) 1 NC_015436.1 COGs: COG1109 Phosphomannomutase; InterPro IPR005844:IPR005845; KEGG: sta:STHERM_c11950 hypothetical protein; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; SPTR: uncharacterized protein; IMG reference gene:2503957323; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I 1172870 10495334 Spico_1017 Sphaerochaeta coccoides DSM 17374 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I YP_004411621.1 1171098 R 760011 CDS YP_004411622.1 330836981 10495335 complement(1172857..1173540) 1 NC_015436.1 COGs: COG0546 phosphatase; InterPro IPR005834; KEGG: apv:Apar_0414 HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; PRIAM: Phosphoglycolate phosphatase; SPTR: Phosphoglycolate phosphatase; IMG reference gene:2503957324; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 2-phosphoglycolate phosphatase, prokaryotic; phosphoglycolate phosphatase 1173540 10495335 Spico_1018 Sphaerochaeta coccoides DSM 17374 phosphoglycolate phosphatase YP_004411622.1 1172857 R 760011 CDS YP_004411623.1 330836982 10495336 1173744..1175009 1 NC_015436.1 COGs: COG1092 SAM-dependent methyltransferase; KEGG: phe:Phep_4225 PUA domain containing protein; SPTR: PUA domain containing protein; IMG reference gene:2503957325; PFAM: S-adenosylmethionine-dependent methyltransferase; PUA domain containing protein 1175009 10495336 Spico_1019 Sphaerochaeta coccoides DSM 17374 PUA domain containing protein YP_004411623.1 1173744 D 760011 CDS YP_004411624.1 330836983 10495337 complement(1175035..1175697) 1 NC_015436.1 InterPro IPR005358; KEGG: tde:TDE0847 hypothetical protein; PFAM: Uncharacterised protein family UPF0153; SPTR: uncharacterized protein; IMG reference gene:2503957326; PFAM: Uncharacterised protein family (UPF0153); hypothetical protein 1175697 10495337 Spico_1020 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411624.1 1175035 R 760011 CDS YP_004411625.1 330836984 10495338 complement(1175788..1176813) 1 NC_015436.1 COGs: COG0598 Mg2+ and Co2+ transporter; InterPro IPR002523; KEGG: cce:Ccel_2001 Mg2 transporter protein CorA family protein; PFAM: Mg2+ transporter protein, CorA-like; SPTR: Mg2 transporter protein CorA family protein; IMG reference gene:2503957327; PFAM: CorA-like Mg2+ transporter protein; Mg2 transporter protein CorA family protein 1176813 10495338 Spico_1021 Sphaerochaeta coccoides DSM 17374 Mg2 transporter protein CorA family protein YP_004411625.1 1175788 R 760011 CDS YP_004411626.1 330836985 10495339 1177217..1177774 1 NC_015436.1 COGs: COG2316 hydrolase (HD superfamily); InterPro IPR006674:IPR006675; KEGG: ttm:Tthe_2220 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SPTR: Metal dependent phosphohydrolase; TIGRFAM: Uncharacterised protein family HDIG; IMG reference gene:2503957328; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG; metal dependent phosphohydrolase 1177774 10495339 Spico_1022 Sphaerochaeta coccoides DSM 17374 metal dependent phosphohydrolase YP_004411626.1 1177217 D 760011 CDS YP_004411627.1 330836986 10495340 1177771..1177926 1 NC_015436.1 KEGG: hmg:100201846 similar to predicted protein; IMG reference gene:2503957329; hypothetical protein 1177926 10495340 Spico_1023 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411627.1 1177771 D 760011 CDS YP_004411628.1 330836987 10495341 1178025..1178324 1 NC_015436.1 IMG reference gene:2503957330; hypothetical protein 1178324 10495341 Spico_1024 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411628.1 1178025 D 760011 CDS YP_004411629.1 330836988 10495342 complement(1178257..1179339) 1 NC_015436.1 COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase; KEGG: tde:TDE2107 dihydroorotase, SPTR: Dihydroorotase, ; IMG reference gene:2503957331; dihydroorotase 1179339 10495342 Spico_1025 Sphaerochaeta coccoides DSM 17374 dihydroorotase YP_004411629.1 1178257 R 760011 CDS YP_004411630.1 330836989 10495343 complement(1179336..1181132) 1 NC_015436.1 COGs: COG0167 Dihydroorotate dehydrogenase; InterPro IPR012135:IPR008333:IPR001433:IPR005720; KEGG: tde:TDE0982 dihydroorotate dehydrogenase/oxidoreductase, FAD-binding; PFAM: Dihydroorotate dehydrogenase, class 1/ 2; Oxidoreductase, FAD-binding domain; Oxidoreductase FAD/NAD(P)-binding; SPTR: Dihydroorotate dehydrogenase/oxidoreductase, FAD-binding; TIGRFAM: Dihydroorotate dehydrogenase, class 1; IMG reference gene:2503957332; PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase (subfamily 1) family protein; dihydroorotate dehydrogenase 1181132 10495343 Spico_1026 Sphaerochaeta coccoides DSM 17374 dihydroorotate dehydrogenase YP_004411630.1 1179336 R 760011 CDS YP_004411631.1 330836990 10495344 complement(1181129..1182067) 1 NC_015436.1 COGs: COG0284 Orotidine-5'-phosphate decarboxylase; InterPro IPR001754:IPR011995; KEGG: ssm:Spirs_1435 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase domain; PRIAM: Orotidine-5'-phosphate decarboxylase; SMART: Orotidine 5'-phosphate decarboxylase domain; SPTR: Orotidine 5'-phosphate decarboxylase; TIGRFAM: Orotidine 5'-phosphate decarboxylase, type 2; IMG reference gene:2503957333; PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 2; orotidine 5'-phosphate decarboxylase 1182067 10495344 Spico_1027 Sphaerochaeta coccoides DSM 17374 orotidine 5'-phosphate decarboxylase YP_004411631.1 1181129 R 760011 CDS YP_004411632.1 330836991 10495345 complement(1182045..1182737) 1 NC_015436.1 COGs: COG0461 Orotate phosphoribosyltransferase; InterPro IPR000836:IPR004467; KEGG: tde:TDE1001 orotate phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; SPTR: Orotate phosphoribosyltransferase; TIGRFAM: Orotate phosphoribosyl transferase, clade 1; IMG reference gene:2503957334; PFAM: Phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase; orotate phosphoribosyltransferase 1182737 10495345 Spico_1028 Sphaerochaeta coccoides DSM 17374 orotate phosphoribosyltransferase YP_004411632.1 1182045 R 760011 CDS YP_004411633.1 330836992 10495346 complement(1182734..1184350) 1 NC_015436.1 COGs: COG0540 Aspartate carbamoyltransferase catalytic chain; InterPro IPR006132:IPR006131:IPR002082; KEGG: tde:TDE0129 bifunctional aspartate carbamoyltransferase catalytic subunit/aspartate carbamoyltransferase regulatory subunit; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain; PRIAM: Aspartate carbamoyltransferase; SPTR: Protein pyrBI; TIGRFAM: Aspartate carbamoyltransferase, eukaryotic; IMG reference gene:2503957335; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; Aspartate carbamoyltransferase regulatory chain, metal binding domain; Aspartate carbamoyltransferase regulatory chain, allosteric domain; TIGRFAM: aspartate carbamoyltransferase; aspartate carbamoyltransferase 1184350 10495346 Spico_1029 Sphaerochaeta coccoides DSM 17374 aspartate carbamoyltransferase YP_004411633.1 1182734 R 760011 CDS YP_004411634.1 330836993 10495347 1184751..1185233 1 NC_015436.1 COGs: COG2606 conserved hypothetical protein; InterPro IPR007214:IPR004369; KEGG: ssm:Spirs_3308 YbaK/EbsC protein; PFAM: YbaK/aminoacyl-tRNA synthetase-associated domain; SPTR: YbaK/ebsC protein; TIGRFAM: Prolyl-tRNA editing protein, YbaK/EbsC; IMG reference gene:2503957336; PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein; ybaK/ebsC protein 1185233 10495347 Spico_1030 Sphaerochaeta coccoides DSM 17374 ybaK/ebsC protein YP_004411634.1 1184751 D 760011 CDS YP_004411635.1 330836994 10495348 complement(1185257..1185931) 1 NC_015436.1 COGs: COG0546 phosphatase; InterPro IPR005834:IPR006439; KEGG: rha:RHA1_ro01185 phosphoglycolate phosphatase; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: Phosphoglycolate phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; IMG reference gene:2503957337; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; HAD-superfamily hydrolase 1185931 10495348 Spico_1031 Sphaerochaeta coccoides DSM 17374 HAD-superfamily hydrolase YP_004411635.1 1185257 R 760011 CDS YP_004411636.1 330836995 10495350 complement(1186164..1187762) 1 NC_015436.1 KEGG: ank:AnaeK_1538 sec-C motif domain protein; SPTR: SEC-C motif domain protein; IMG reference gene:2503957339; hypothetical protein 1187762 10495350 Spico_1033 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411636.1 1186164 R 760011 CDS YP_004411637.1 330836996 10495351 complement(1187755..1188270) 1 NC_015436.1 COGs: COG3467 flavin-nucleotide-binding protein; InterPro IPR011576; KEGG: ctc:CTC00899 5-nitroimidazole antibiotic resistance protein; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; SPTR: Predicted flavin-nucleotide-binding protein; IMG reference gene:2503957340; PFAM: Pyridoxamine 5'-phosphate oxidase; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 1188270 10495351 Spico_1034 Sphaerochaeta coccoides DSM 17374 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_004411637.1 1187755 R 760011 CDS YP_004411638.1 330836997 10495352 complement(1188332..1189582) 1 NC_015436.1 COGs: COG4277 DNA-binding protein with the Helix-hairpin-helix motif; InterPro IPR007197; KEGG: tjr:TherJR_1012 radical SAM domain protein; PFAM: Radical SAM; SPTR: Helix-hairpin-helix motif protein; IMG reference gene:2503957341; radical SAM protein 1189582 10495352 Spico_1035 Sphaerochaeta coccoides DSM 17374 radical SAM protein YP_004411638.1 1188332 R 760011 CDS YP_004411639.1 330836998 10495353 1189679..1190095 1 NC_015436.1 COGs: COG0432 conserved hypothetical protein; InterPro IPR001602; KEGG: chy:CHY_0024 hypothetical protein; PFAM: Uncharacterised protein family UPF0047; SPTR: uncharacterized protein; TIGRFAM: Uncharacterised protein family UPF0047; IMG reference gene:2503957342; PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme; hypothetical protein 1190095 10495353 Spico_1036 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411639.1 1189679 D 760011 CDS YP_004411640.1 330836999 10495354 complement(1190265..1191254) 1 NC_015436.1 COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: gka:GK1893 sugar ABC transporter (permease); PFAM: ABC transporter permease; SPTR: Monosaccharide-transporting ATPase; IMG reference gene:2503957343; PFAM: Branched-chain amino acid transport system / permease component; inner-membrane translocator 1191254 10495354 Spico_1037 Sphaerochaeta coccoides DSM 17374 inner-membrane translocator YP_004411640.1 1190265 R 760011 CDS YP_004411641.1 330837000 10495355 complement(1191257..1192762) 1 NC_015436.1 COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: str:Sterm_4010 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; IMG reference gene:2503957344; PFAM: ABC transporter; monosaccharide ABC transporter ATP-binding protein, CUT2 family 1192762 10495355 Spico_1038 Sphaerochaeta coccoides DSM 17374 monosaccharide ABC transporter ATP-binding protein, CUT2 family YP_004411641.1 1191257 R 760011 CDS YP_004411642.1 330837001 10495356 complement(1192856..1193866) 1 NC_015436.1 COGs: COG1879 ABC-type sugar transport system periplasmic component; KEGG: gka:GK1896 sugar ABC transporter (sugar-binding protein); SPTR: Periplasmic binding protein/LacI transcriptional regulator; IMG reference gene:2503957345; PFAM: family; sugar ABC transporter substrate-binding protein 1193866 10495356 Spico_1039 Sphaerochaeta coccoides DSM 17374 sugar ABC transporter substrate-binding protein YP_004411642.1 1192856 R 760011 CDS YP_004411643.1 330837002 10495357 complement(1193910..1194869) 1 NC_015436.1 COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: rca:Rcas_0181 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; IMG reference gene:2503957346; PFAM: NAD dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 1194869 10495357 Spico_1040 Sphaerochaeta coccoides DSM 17374 NAD-dependent epimerase/dehydratase YP_004411643.1 1193910 R 760011 CDS YP_004411644.1 330837003 10495358 complement(1194862..1195587) 1 NC_015436.1 COGs: COG2186 Transcriptional regulators; InterPro IPR000524:IPR011711; KEGG: rxy:Rxyl_0539 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR; SPTR: GntR domain protein; IMG reference gene:2503957347; PFAM: Bacterial regulatory proteins, gntR family; FCD domain; GntR family transcriptional regulator 1195587 10495358 Spico_1041 Sphaerochaeta coccoides DSM 17374 GntR family transcriptional regulator YP_004411644.1 1194862 R 760011 CDS YP_004411645.1 330837004 10495359 complement(1195584..1196354) 1 NC_015436.1 COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: pjd:Pjdr2_0308 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Short-chain dehydrogenase/reductase SDR; IMG reference gene:2503957348; PFAM: short chain dehydrogenase; 3-oxoacyl-ACP reductase 1196354 10495359 Spico_1042 Sphaerochaeta coccoides DSM 17374 3-oxoacyl-ACP reductase YP_004411645.1 1195584 R 760011 CDS YP_004411646.1 330837005 10495360 complement(1196369..1197172) 1 NC_015436.1 COGs: COG3246 conserved hypothetical protein; InterPro IPR008567; KEGG: sth:STH64 hypothetical protein; PFAM: Protein of unknown function DUF849, prokaryotic; SPTR: uncharacterized protein; IMG reference gene:2503957349; PFAM: Prokaryotic protein of unknown function (DUF849); hypothetical protein 1197172 10495360 Spico_1043 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411646.1 1196369 R 760011 CDS YP_004411647.1 330837006 10495361 complement(1197192..1199978) 1 NC_015436.1 COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104:IPR000587:IPR000994; KEGG: csh:Closa_3838 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; Creatinase; Peptidase M24, structural domain; SPTR: Oxidoreductase domain protein; IMG reference gene:2503957350; PFAM: Oxidoreductase, NAD-binding Rossmann fold; Oxidoreductase, C-terminal alpha/beta domain; Metallopeptidase M24; Creatinase/Prolidase N-terminal domain; oxidoreductase domain-containing protein 1199978 10495361 Spico_1044 Sphaerochaeta coccoides DSM 17374 oxidoreductase domain-containing protein YP_004411647.1 1197192 R 760011 CDS YP_004411648.1 330837007 10495362 complement(1200428..1201627) 1 NC_015436.1 COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: aco:Amico_0368 aminotransferase class I and II; PFAM: Aminotransferase, class I/classII; PRIAM: Aspartate transaminase; SPTR: alanine transaminase (Class-I pyridoxal-phosphate-dependent aminotransferase) (AlaT/patA-like); IMG reference gene:2503957351; PFAM: Aminotransferase class I and II; aspartate transaminase 1201627 10495362 Spico_1045 Sphaerochaeta coccoides DSM 17374 aspartate transaminase YP_004411648.1 1200428 R 760011 CDS YP_004411649.1 330837008 10495363 complement(1201778..1203076) 1 NC_015436.1 COGs: COG0462 Phosphoribosylpyrophosphate synthetase; InterPro IPR000836:IPR005946; KEGG: ssm:Spirs_0557 ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyltransferase; PRIAM: Ribose-phosphate diphosphokinase; SPTR: Phosphoribosylpyrophosphate synthetase; TIGRFAM: Phosphoribosyl pyrophosphokinase; IMG reference gene:2503957352; PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase; ribose-phosphate pyrophosphokinase 1203076 10495363 Spico_1046 Sphaerochaeta coccoides DSM 17374 ribose-phosphate pyrophosphokinase YP_004411649.1 1201778 R 760011 CDS YP_004411650.1 330837009 10495364 complement(1203186..1204043) 1 NC_015436.1 COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: thx:Thet_2162 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: uncharacterized protein; IMG reference gene:2503957353; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 1204043 10495364 Spico_1047 Sphaerochaeta coccoides DSM 17374 binding-protein-dependent transport system inner membrane protein YP_004411650.1 1203186 R 760011 CDS YP_004411651.1 330837010 10495365 complement(1204040..1204942) 1 NC_015436.1 COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: tle:Tlet_1227 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: uncharacterized protein; IMG reference gene:2503957354; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 1204942 10495365 Spico_1048 Sphaerochaeta coccoides DSM 17374 binding-protein-dependent transport system inner membrane protein YP_004411651.1 1204040 R 760011 CDS YP_004411652.1 330837011 10495366 complement(1205010..1206272) 1 NC_015436.1 COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: tpd:Teth39_0261 extracellular solute-binding protein; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: uncharacterized protein; IMG reference gene:2503957355; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein 1206272 10495366 Spico_1049 Sphaerochaeta coccoides DSM 17374 ABC transporter substrate-binding protein YP_004411652.1 1205010 R 760011 CDS YP_004411653.1 330837012 10495367 complement(1206276..1208033) 1 NC_015436.1 COGs: COG0366 Glycosidase; InterPro IPR004185:IPR006047:IPR006589; KEGG: bse:Bsel_1069 alpha amylase catalytic region; PFAM: Glycosyl hydrolase, family 13, catalytic domain; Glycoside hydrolase, family 13, N-terminal Ig-like domain; PRIAM: Cyclomaltodextrinase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; SPTR: uncharacterized protein; IMG reference gene:2503957356; PFAM: Alpha amylase, N-terminal ig-like domain; Alpha amylase, catalytic domain; cyclomaltodextrinase 1208033 10495367 Spico_1050 Sphaerochaeta coccoides DSM 17374 cyclomaltodextrinase YP_004411653.1 1206276 R 760011 CDS YP_004411654.1 330837013 10495368 complement(1208026..1209054) 1 NC_015436.1 COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: afl:Aflv_2186 transcriptional regulator, LacI family (HTH and periplasmic-binding domains); PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI; SPTR: Transcriptional regulator, LacI family; IMG reference gene:2503957357; PFAM: Bacterial regulatory proteins, lacI family; family; LacI family transcriptional regulator 1209054 10495368 Spico_1051 Sphaerochaeta coccoides DSM 17374 LacI family transcriptional regulator YP_004411654.1 1208026 R 760011 CDS YP_004411655.1 330837014 10495369 complement(1209299..1210672) 1 NC_015436.1 COGs: COG0165 Argininosuccinate lyase; InterPro IPR022761:IPR009049; KEGG: ssm:Spirs_3701 argininosuccinate lyase; PFAM: Lyase 1, N-terminal; PRIAM: Argininosuccinate lyase; SPTR: Argininosuccinate lyase; TIGRFAM: Argininosuccinate lyase; IMG reference gene:2503957358; PFAM: Lyase; TIGRFAM: argininosuccinate lyase; argininosuccinate lyase 1210672 10495369 Spico_1052 Sphaerochaeta coccoides DSM 17374 argininosuccinate lyase YP_004411655.1 1209299 R 760011 CDS YP_004411656.1 330837015 10495370 1210850..1211902 1 NC_015436.1 KEGG: sta:STHERM_c01870 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957359; hypothetical protein 1211902 10495370 Spico_1053 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411656.1 1210850 D 760011 CDS YP_004411657.1 330837016 10495371 complement(1211890..1212213) 1 NC_015436.1 COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR013766:IPR005746; KEGG: sta:STHERM_c01860 thioredoxin; PFAM: Thioredoxin domain; SPTR: Thioredoxin; TIGRFAM: Thioredoxin; IMG reference gene:2503957360; PFAM: Thioredoxin; TIGRFAM: thioredoxin; thioredoxin 1212213 10495371 Spico_1054 Sphaerochaeta coccoides DSM 17374 thioredoxin YP_004411657.1 1211890 R 760011 CDS YP_004411658.1 330837017 10495372 complement(1212365..1212823) 1 NC_015436.1 COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR000424:IPR011344; KEGG: ssm:Spirs_3718 single-strand binding protein; PFAM: Primosome PriB/single-strand DNA-binding; SPTR: Single-stranded DNA-binding protein; TIGRFAM: Single-strand DNA-binding; IMG reference gene:2503957361; PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); single-strand binding protein 1212823 10495372 Spico_1055 Sphaerochaeta coccoides DSM 17374 single-strand binding protein YP_004411658.1 1212365 R 760011 CDS YP_004411659.1 330837018 10495373 1213119..1213811 1 NC_015436.1 COGs: COG0528 Uridylate kinase; InterPro IPR001048:IPR011818; KEGG: tde:TDE2085 uridylate kinase; PFAM: Aspartate/glutamate/uridylate kinase; SPTR: Amino acid kinase; TIGRFAM: Uridylate kinase, archaeal/spirochete, IMG reference gene:2503957362; PFAM: Amino acid kinase; TIGRFAM: uridylate kinase; uridylate kinase 1213811 10495373 Spico_1056 Sphaerochaeta coccoides DSM 17374 uridylate kinase YP_004411659.1 1213119 D 760011 CDS YP_004411660.1 330837019 10495374 complement(1213977..1214951) 1 NC_015436.1 COGs: COG1313 Uncharacterized Fe-S protein PflX homolog of pyruvate formate lyase activating protein; InterPro IPR007197; KEGG: ssm:Spirs_3763 radical SAM domain protein; PFAM: Radical SAM; SPTR: Radical SAM domain protein; IMG reference gene:2503957363; radical SAM protein 1214951 10495374 Spico_1057 Sphaerochaeta coccoides DSM 17374 radical SAM protein YP_004411660.1 1213977 R 760011 CDS YP_004411661.1 330837020 10495375 1215018..1216280 1 NC_015436.1 COGs: COG3621 Patatin; InterPro IPR002641; KEGG: ssm:Spirs_0041 patatin; PFAM: Patatin/Phospholipase A2-related; SPTR: Patatin family protein; IMG reference gene:2503957364; PFAM: Patatin-like phospholipase; patatin 1216280 10495375 Spico_1058 Sphaerochaeta coccoides DSM 17374 patatin YP_004411661.1 1215018 D 760011 CDS YP_004411662.1 330837021 10495376 complement(1216272..1217153) 1 NC_015436.1 COGs: COG2240 Pyridoxal/pyridoxine/pyridoxamine kinase; InterPro IPR013749; KEGG: hor:Hore_04110 pyridoxamine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; SPTR: Pyridoxal kinase; IMG reference gene:2503957365; PFAM: Phosphomethylpyrimidine kinase; Phosphomethylpyrimidine kinase type-1 1217153 10495376 Spico_1059 Sphaerochaeta coccoides DSM 17374 Phosphomethylpyrimidine kinase type-1 YP_004411662.1 1216272 R 760011 CDS YP_004411663.1 330837022 10495377 1217196..1219205 1 NC_015436.1 COGs: COG1109 Phosphomannomutase; InterPro IPR005844; KEGG: ssm:Spirs_2289 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; SPTR: uncharacterized protein; IMG reference gene:2503957366; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I 1219205 10495377 Spico_1060 Sphaerochaeta coccoides DSM 17374 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I YP_004411663.1 1217196 D 760011 CDS YP_004411664.1 330837023 10495378 complement(1219233..1220540) 1 NC_015436.1 COGs: COG5026 Hexokinase; InterPro IPR022672:IPR022673; KEGG: ssm:Spirs_3985 hexokinase; PFAM: Hexokinase, C-terminal; Hexokinase, N-terminal; PRIAM: Hexokinase; SPTR: uncharacterized protein; IMG reference gene:2503957367; PFAM: Hexokinase; hexokinase 1220540 10495378 Spico_1061 Sphaerochaeta coccoides DSM 17374 hexokinase YP_004411664.1 1219233 R 760011 CDS YP_004411665.1 330837024 10495379 1220679..1222103 1 NC_015436.1 COGs: COG2925 Exonuclease I; InterPro IPR013520:IPR013620:IPR006055; KEGG: ssm:Spirs_3051 exodeoxyribonuclease I; PFAM: Exonuclease C-terminal; Exonuclease, RNase T/DNA polymerase III; PRIAM: Exodeoxyribonuclease I; SMART: Exonuclease; SPTR: Exodeoxyribonuclease I subunit C; IMG reference gene:2503957368; PFAM: Exonuclease; Exonuclease C-terminal; exodeoxyribonuclease I 1222103 10495379 Spico_1062 Sphaerochaeta coccoides DSM 17374 exodeoxyribonuclease I YP_004411665.1 1220679 D 760011 CDS YP_004411666.1 330837025 10495380 1222508..1224601 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR011110:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; Two component regulator propeller; SPTR: uncharacterized protein; IMG reference gene:2503957369; PFAM: Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 1224601 10495380 Spico_1063 Sphaerochaeta coccoides DSM 17374 chromosome condensation regulator RCC1 YP_004411666.1 1222508 D 760011 CDS YP_004411667.1 330837026 10495381 complement(1224736..1225929) 1 NC_015436.1 COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR004839:IPR011282; KEGG: sro:Sros_8853 glycine C-acetyltransferase; PFAM: Aminotransferase, class I/classII; PRIAM: Glycine C-acetyltransferase; SPTR: Glycine C-acetyltransferase; TIGRFAM: 2-amino-3-ketobutyrate coenzyme A ligase; IMG reference gene:2503957370; PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; 2-amino-3-ketobutyrate coenzyme A ligase; 2-amino-3-ketobutyrate CoA ligase 1225929 10495381 Spico_1064 Sphaerochaeta coccoides DSM 17374 2-amino-3-ketobutyrate CoA ligase YP_004411667.1 1224736 R 760011 CDS YP_004411668.1 330837027 10495382 complement(1225926..1226888) 1 NC_015436.1 COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: bmd:BMD_1541 NAD dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: L-threonine 3-dehydrogenase; SPTR: NAD-dependent epimerase; possible UDP-glucose 4-epimerase; IMG reference gene:2503957371; PFAM: NAD dependent epimerase/dehydratase; L-threonine 3-dehydrogenase 1226888 10495382 Spico_1065 Sphaerochaeta coccoides DSM 17374 L-threonine 3-dehydrogenase YP_004411668.1 1225926 R 760011 CDS YP_004411669.1 330837028 10495383 1227126..1227701 1 NC_015436.1 InterPro IPR001387:IPR013096; KEGG: ssm:Spirs_2303 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; Cupin 2, conserved barrel; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator, XRE family; IMG reference gene:2503957372; PFAM: Cupin domain; Helix-turn-helix; helix-turn-helix domain-containing protein 1227701 10495383 Spico_1066 Sphaerochaeta coccoides DSM 17374 helix-turn-helix domain-containing protein YP_004411669.1 1227126 D 760011 CDS YP_004411670.1 330837029 10495384 1227829..1229223 1 NC_015436.1 COGs: COG2211 Na+/melibiose symporter and related transporter; InterPro IPR011701; KEGG: tth:TT_P0219 hypothetical protein; PFAM: Major facilitator superfamily MFS-1; SPTR: Predicted protein; IMG reference gene:2503957373; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein 1229223 10495384 Spico_1067 Sphaerochaeta coccoides DSM 17374 major facilitator superfamily protein YP_004411670.1 1227829 D 760011 CDS YP_004411671.1 330837030 10495385 complement(1229334..1231538) 1 NC_015436.1 COGs: COG3345 Alpha-galactosidase; InterPro IPR000111; KEGG: ere:EUBREC_0489 alpha-galactosidase; PFAM: Glycoside hydrolase, clan GH-D; PRIAM: Alpha-galactosidase; SPTR: uncharacterized protein; IMG reference gene:2503957374; PFAM: Melibiase; alpha-galactosidase 1231538 10495385 Spico_1068 Sphaerochaeta coccoides DSM 17374 alpha-galactosidase YP_004411671.1 1229334 R 760011 CDS YP_004411672.1 330837031 10495386 complement(1231570..1234170) 1 NC_015436.1 InterPro IPR019563; KEGG: hje:HacjB3_16901 glycoside hydrolase 97; PFAM: Glycoside hydrolase, family 97; SPTR: Alpha-glucosidase; IMG reference gene:2503957375; PFAM: Glycoside hydrolase 97; glycoside hydrolase 1234170 10495386 Spico_1069 Sphaerochaeta coccoides DSM 17374 glycoside hydrolase YP_004411672.1 1231570 R 760011 CDS YP_004411673.1 330837032 10495387 complement(1234273..1235157) 1 NC_015436.1 COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: cce:Ccel_1254 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503957376; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 1235157 10495387 Spico_1070 Sphaerochaeta coccoides DSM 17374 binding-protein-dependent transport system inner membrane protein YP_004411673.1 1234273 R 760011 CDS YP_004411674.1 330837033 10495388 complement(1235170..1236123) 1 NC_015436.1 COGs: COG4209 ABC-type polysaccharide transport system permease component; InterPro IPR000515; KEGG: gym:GYMC10_4465 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503957377; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 1236123 10495388 Spico_1071 Sphaerochaeta coccoides DSM 17374 binding-protein-dependent transport system inner membrane protein YP_004411674.1 1235170 R 760011 CDS YP_004411675.1 330837034 10495389 complement(1236222..1237820) 1 NC_015436.1 COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: cce:Ccel_1252 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein family 1; IMG reference gene:2503957378; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein 1237820 10495389 Spico_1072 Sphaerochaeta coccoides DSM 17374 ABC transporter substrate-binding protein YP_004411675.1 1236222 R 760011 CDS YP_004411676.1 330837035 10495390 complement(1237948..1239192) 1 NC_015436.1 COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: ppp:PHYPADRAFT_103760 hypothetical protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Predicted protein; IMG reference gene:2503957379; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator 1239192 10495390 Spico_1073 Sphaerochaeta coccoides DSM 17374 AraC family transcriptional regulator YP_004411676.1 1237948 R 760011 CDS YP_004411677.1 330837036 10495391 1239490..1240554 1 NC_015436.1 COGs: COG0216 Protein chain release factor A; HAMAP: Peptide chain release factor 1; InterPro IPR004373:IPR005139:IPR000352; KEGG: tde:TDE2489 peptide chain release factor 1; PFAM: Peptide chain release factor class I/class II; Peptide chain release factor; SMART: Peptide chain release factor; SPTR: Peptide chain release factor 1; TIGRFAM: Peptide chain release factor 1; IMG reference gene:2503957380; PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1; peptide chain release factor 1 1240554 10495391 Spico_1074 Sphaerochaeta coccoides DSM 17374 peptide chain release factor 1 YP_004411677.1 1239490 D 760011 CDS YP_004411678.1 330837037 10495392 1240554..1241417 1 NC_015436.1 COGs: COG2890 Methylase of polypeptide chain release factors; InterPro IPR007848:IPR004556:IPR019874; KEGG: dsy:DSY4933 hypothetical protein; PFAM: Methyltransferase small; PRIAM: Site-specific DNA-methyltransferase (adenine-specific); SPTR: Methylase of polypeptide chain release factors; TIGRFAM: Protein-(glutamine-N5) methyltransferase, release factor-specific; Modification methylase HemK; IMG reference gene:2503957381; PFAM: Methyltransferase small domain; TIGRFAM: HemK family methylases; protein-(glutamine-N5) methyltransferase, release factor-specific; protein-(glutamine-N5) methyltransferase 1241417 10495392 Spico_1075 Sphaerochaeta coccoides DSM 17374 protein-(glutamine-N5) methyltransferase YP_004411678.1 1240554 D 760011 CDS YP_004411679.1 330837038 10495393 1241402..1243456 1 NC_015436.1 COGs: COG0317 Guanosine polyphosphate pyrophosphohydrolase/synthetase; InterProIPR006674:IPR007685:IPR004095:IPR004811:IPR 003607; KEGG: ssm:Spirs_3047 (p)ppGpp synthetase I, SpoT/RelA; PFAM: RelA/SpoT; Metal-dependent phosphohydrolase, HD subdomain; TGS; PRIAM: GTP diphosphokinase; SMART: RelA/SpoT; Metal-dependent phosphohydrolase, HD domain; SPTR: Probable GTP pyrophosphokinase; TIGRFAM: RelA/SpoT protein; IMG reference gene:2503957382; PFAM: HD domain; TGS domain; Region found in RelA / SpoT proteins; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family; (p)ppGpp synthetase I SpoT/RelA 1243456 10495393 Spico_1076 Sphaerochaeta coccoides DSM 17374 (p)ppGpp synthetase I SpoT/RelA YP_004411679.1 1241402 D 760011 CDS YP_004411680.1 330837039 10495394 1243577..1244026 1 NC_015436.1 COGs: COG0698 Ribose 5-phosphate isomerase RpiB; InterPro IPR003500; KEGG: ssm:Spirs_2662 sugar-phosphate isomerase, RpiB/LacA/LacB family; PFAM: Ribose/galactose isomerase; PRIAM: Ribose-5-phosphate isomerase; SPTR: Ribose 5-phosphate isomerase B; TIGRFAM: Ribose/galactose isomerase; IMG reference gene:2503957383; PFAM: Ribose/Galactose Isomerase; TIGRFAM: sugar-phosphate isomerases, RpiB/LacA/LacB family; ribose-5-phosphate isomerase 1244026 10495394 Spico_1077 Sphaerochaeta coccoides DSM 17374 ribose-5-phosphate isomerase YP_004411680.1 1243577 D 760011 CDS YP_004411681.1 330837040 10495395 complement(1244053..1244688) 1 NC_015436.1 KEGG: asc:ASAC_1319 dehydrogenase; SPTR: Aquaporin Z; manually curated; IMG reference gene:2503957384; hypothetical protein 1244688 10495395 Spico_1078 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411681.1 1244053 R 760011 CDS YP_004411682.1 330837041 10495396 complement(1244685..1245227) 1 NC_015436.1 KEGG: ppp:PHYPADRAFT_84532 Rb -related protein; SPTR: Retinoblastoma-related protein; IMG reference gene:2503957385; hypothetical protein 1245227 10495396 Spico_1079 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411682.1 1244685 R 760011 CDS YP_004411683.1 330837042 10495397 complement(1245250..1246539) 1 NC_015436.1 COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; InterPro IPR001736; KEGG: dal:Dalk_3445 phospholipase D/transphosphatidylase; PFAM: Phospholipase D/Transphosphatidylase; SMART: Phospholipase D/Transphosphatidylase; SPTR: Cardiolipin synthetase; IMG reference gene:2503957386; PFAM: Phospholipase D Active site motif; phospholipase D/Transphosphatidylase 1246539 10495397 Spico_1080 Sphaerochaeta coccoides DSM 17374 phospholipase D/Transphosphatidylase YP_004411683.1 1245250 R 760011 CDS YP_004411684.1 330837043 10495398 complement(1246539..1247714) 1 NC_015436.1 COGs: COG0295 Cytidine deaminase; InterPro IPR005834:IPR002125:IPR006402:IPR006262; KEGG: ssm:Spirs_2666 cytidine deaminase; PFAM: Haloacid dehalogenase-like hydrolase; CMP/dCMP deaminase, zinc-binding; SPTR: uncharacterized protein; TIGRFAM: Cytidine deaminase, homotetrameric; HAD-superfamily hydrolase, subfamily IA, variant 3; IMG reference gene:2503957387; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; cytidine deaminase, homotetrameric; cytidine deaminase 1247714 10495398 Spico_1081 Sphaerochaeta coccoides DSM 17374 cytidine deaminase YP_004411684.1 1246539 R 760011 CDS YP_004411685.1 330837044 10495399 complement(1247807..1249333) 1 NC_015436.1 COGs: COG0112 Glycine/serine hydroxymethyltransferase; InterPro IPR001085; KEGG: ssm:Spirs_2146 glycine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase; PRIAM: Glycine hydroxymethyltransferase; SPTR: Serine hydroxymethyltransferase; IMG reference gene:2503957388; PFAM: Serine hydroxymethyltransferase; serine hydroxymethyltransferase 1249333 10495399 Spico_1082 Sphaerochaeta coccoides DSM 17374 serine hydroxymethyltransferase YP_004411685.1 1247807 R 760011 CDS YP_004411686.1 330837045 10495400 1249557..1249796 1 NC_015436.1 COGs: COG0361 Translation initiation factor 1 (IF-1); HAMAP: Translation initiation factor IF-1; InterPro IPR004368:IPR006196:IPR022967; KEGG: sta:STHERM_c16730 translation initiation factor IF-1 1; PFAM: RNA-binding domain, S1, IF1 type; SMART: RNA-binding domain, S1; SPTR: Translation initiation factor IF-1 1; TIGRFAM: Translation initiation factor IF-1; IMG reference gene:2503957389; PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1; translation initiation factor 1 (bIF-1) 1249796 10495400 Spico_1083 Sphaerochaeta coccoides DSM 17374 translation initiation factor 1 (bIF-1) YP_004411686.1 1249557 D 760011 CDS YP_004411687.1 330837046 10495401 1249756..1250046 1 NC_015436.1 KEGG: scm:SCHCODRAFT_61185 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957390; hypothetical protein 1250046 10495401 Spico_1084 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411687.1 1249756 D 760011 CDS YP_004411688.1 330837047 10495402 complement(1250144..1251166) 1 NC_015436.1 COGs: COG1893 Ketopantoate reductase; InterPro IPR013332:IPR013752:IPR003710; KEGG: pde:Pden_4530 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, C-terminal; Ketopantoate reductase ApbA/PanE, N-terminal; PRIAM: 2-dehydropantoate 2-reductase; SPTR: 2-dehydropantoate 2-reductase; TIGRFAM: Ketopantoate reductase ApbA/PanE; IMG reference gene:2503957391; PFAM: Ketopantoate reductase PanE/ApbA; Ketopantoate reductase PanE/ApbA C terminal; TIGRFAM: 2-dehydropantoate 2-reductase; 2-dehydropantoate 2-reductase 1251166 10495402 Spico_1085 Sphaerochaeta coccoides DSM 17374 2-dehydropantoate 2-reductase YP_004411688.1 1250144 R 760011 CDS YP_004411689.1 330837048 10495403 complement(1251274..1252116) 1 NC_015436.1 COGs: COG2840 conserved hypothetical protein; InterPro IPR002625; KEGG: tde:TDE1254 Smr domain-containing protein; PFAM: Smr protein/MutS2 C-terminal; SMART: Smr protein/MutS2 C-terminal; SPTR: Smr domain protein; IMG reference gene:2503957392; PFAM: Smr domain; Smr protein/MutS2 1252116 10495403 Spico_1086 Sphaerochaeta coccoides DSM 17374 Smr protein/MutS2 YP_004411689.1 1251274 R 760011 CDS YP_004411690.1 330837049 10495404 complement(1252119..1252763) 1 NC_015436.1 COGs: COG3448 CBS-domain-containing membrane protein; InterPro IPR000644:IPR002912; KEGG: ssm:Spirs_0348 signal transduction protein with CBS domains; PFAM: Cystathionine beta-synthase, core; Amino acid-binding ACT; SMART: Cystathionine beta-synthase, core; SPTR: CBS domain containing protein; IMG reference gene:2503957393; PFAM: CBS domain; hypothetical protein 1252763 10495404 Spico_1087 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411690.1 1252119 R 760011 CDS YP_004411691.1 330837050 10495405 complement(1252838..1253581) 1 NC_015436.1 COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: ssm:Spirs_0347 ABC transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; IMG reference gene:2503957394; PFAM: ABC transporter; amino acid ABC transporter ATP-binding protein 1253581 10495405 Spico_1088 Sphaerochaeta coccoides DSM 17374 amino acid ABC transporter ATP-binding protein YP_004411691.1 1252838 R 760011 CDS YP_004411692.1 330837051 10495406 complement(1253574..1254362) 1 NC_015436.1 COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: ddf:DEFDS_0657 branched-chain amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Branched-chain amino acid ABC transporter, ATP-binding protein; IMG reference gene:2503957395; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; amino acid ABC transporter ATP-binding protein 1254362 10495406 Spico_1089 Sphaerochaeta coccoides DSM 17374 amino acid ABC transporter ATP-binding protein YP_004411692.1 1253574 R 760011 CDS YP_004411693.1 330837052 10495407 complement(1254359..1255327) 1 NC_015436.1 COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: dvl:Dvul_2395 inner-membrane translocator; PFAM: ABC transporter permease; SPTR: High-affinity branched-chain amino acid ABC transporter, permease; IMG reference gene:2503957396; PFAM: Branched-chain amino acid transport system / permease component; inner-membrane translocator 1255327 10495407 Spico_1090 Sphaerochaeta coccoides DSM 17374 inner-membrane translocator YP_004411693.1 1254359 R 760011 CDS YP_004411694.1 330837053 10495408 complement(1255327..1256247) 1 NC_015436.1 COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: smc:SmuNN2025_0449 branched chain amino acid ABC transporter permease; PFAM: ABC transporter permease; SPTR: branched chain amino acid ABC transporter, permease; IMG reference gene:2503957397; PFAM: Branched-chain amino acid transport system / permease component; amino acid ABC transporter permease 1256247 10495408 Spico_1091 Sphaerochaeta coccoides DSM 17374 amino acid ABC transporter permease YP_004411694.1 1255327 R 760011 CDS YP_004411695.1 330837054 10495409 complement(1256560..1257738) 1 NC_015436.1 COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: dtu:Dtur_0932 extracellular ligand-binding receptor; PFAM: Extracellular ligand-binding receptor; SPTR: Extracellular ligand-binding receptor; IMG reference gene:2503957398; PFAM: Receptor family ligand binding region; ABC transporter substrate-binding protein 1257738 10495409 Spico_1092 Sphaerochaeta coccoides DSM 17374 ABC transporter substrate-binding protein YP_004411695.1 1256560 R 760011 CDS YP_004411696.1 330837055 10495410 complement(1257969..1258781) 1 NC_015436.1 COGs: COG3541 nucleotidyltransferase; InterPro IPR018775; KEGG: lic:LIC12213 hypothetical protein; PFAM: Nucleotidyltransferase, predicted; SPTR: uncharacterized protein; IMG reference gene:2503957399; PFAM: Predicted nucleotidyltransferase; nucleotidyltransferase 1258781 10495410 Spico_1093 Sphaerochaeta coccoides DSM 17374 nucleotidyltransferase YP_004411696.1 1257969 R 760011 CDS YP_004411697.1 330837056 10495412 1259057..1259779 1 NC_015436.1 COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: spv:SPH_1818 nitroreductase; PFAM: Nitroreductase-like; SPTR: Nitroreductase; IMG reference gene:2503957401; PFAM: Nitroreductase; nitroreductase 1259779 10495412 Spico_1094 Sphaerochaeta coccoides DSM 17374 nitroreductase YP_004411697.1 1259057 D 760011 CDS YP_004411698.1 330837057 10495413 complement(1259909..1261138) 1 NC_015436.1 KEGG: rno:361605 PCF11, cleavage and polyadenylation factor subunit, homolog (S. cerevisiae); SPTR: uncharacterized protein; IMG reference gene:2503957402; hypothetical protein 1261138 10495413 Spico_1095 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411698.1 1259909 R 760011 CDS YP_004411699.1 330837058 10495414 complement(1261327..1263918) 1 NC_015436.1 COGs: COG0550 Topoisomerase IA; InterProIPR006171:IPR013497:IPR005733:IPR003601:IPR 003602; KEGG: ssm:Spirs_0893 DNA topoisomerase I; PFAM: DNA topoisomerase, type IA, central; Toprim domain; PRIAM: DNA topoisomerase; SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain; SPTR: DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial-type; IMG reference gene:2503957403; PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial; DNA topoisomerase I 1263918 10495414 Spico_1096 Sphaerochaeta coccoides DSM 17374 DNA topoisomerase I YP_004411699.1 1261327 R 760011 CDS YP_004411700.1 330837059 10495415 1264185..1264910 1 NC_015436.1 KEGG: ssm:Spirs_3916 hypothetical protein; SPTR: Extracellular solute-binding protein family 5; IMG reference gene:2503957404; hypothetical protein 1264910 10495415 Spico_1097 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411700.1 1264185 D 760011 CDS YP_004411701.1 330837060 10495416 complement(1264957..1266051) 1 NC_015436.1 COGs: COG0012 GTPase probable translation factor; InterPro IPR002917:IPR013029:IPR004396; KEGG: ssm:Spirs_3050 GTP-binding protein YchF; PFAM: Domain of unknown function DUF933; GTP-binding protein, HSR1-related; SPTR: GTP-binding protein YchF; TIGRFAM: Conserved hypothetical protein CHP00092; IMG reference gene:2503957405; PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF; GTP-binding protein YchF 1266051 10495416 Spico_1098 Sphaerochaeta coccoides DSM 17374 GTP-binding protein YchF YP_004411701.1 1264957 R 760011 CDS YP_004411702.1 330837061 10495417 1266082..1267506 1 NC_015436.1 COGs: COG2262 GTPase; InterPro IPR002917:IPR016496; KEGG: ssm:Spirs_3087 GTP-binding protein HflX; PFAM: GTP-binding protein, HSR1-related; SPTR: GTPase; TIGRFAM: GTP-binding protein, HflX; IMG reference gene:2503957406; PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX; GTP-binding protein HflX 1267506 10495417 Spico_1099 Sphaerochaeta coccoides DSM 17374 GTP-binding protein HflX YP_004411702.1 1266082 D 760011 CDS YP_004411703.1 330837062 10495418 complement(1267735..1268193) 1 NC_015436.1 KEGG: pmo:Pmob_1807 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957407; hypothetical protein 1268193 10495418 Spico_1100 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411703.1 1267735 R 760011 CDS YP_004411704.1 330837063 10495419 1268410..1270017 1 NC_015436.1 COGs: COG1297 membrane protein; InterPro IPR004813; KEGG: cce:Ccel_0706 oligopeptide transporters, OPT superfamily; PFAM: Oligopeptide transporter OPT superfamily; SPTR: Oligopeptide transporter, OPT superfamily; IMG reference gene:2503957408; PFAM: OPT oligopeptide transporter protein; TIGRFAM: oligopeptide transporter, OPT family; oligopeptide transporter OPT superfamily protein 1270017 10495419 Spico_1101 Sphaerochaeta coccoides DSM 17374 oligopeptide transporter OPT superfamily protein YP_004411704.1 1268410 D 760011 CDS YP_004411705.1 330837064 10495420 1270038..1271117 1 NC_015436.1 COGs: COG0820 Fe-S-cluster redox enzyme; InterPro IPR007197:IPR004383; KEGG: ssm:Spirs_3145 radical SAM enzyme, Cfr family; PFAM: Radical SAM; SPTR: Ribosomal RNA large subunit methyltransferase N; TIGRFAM: Ribosomal RNA large subunit methyltransferase RlmN; IMG reference gene:2503957409; PFAM: Radical SAM superfamily; TIGRFAM: 23S rRNA m2A2503 methyltransferase; radical SAM enzyme, Cfr family 1271117 10495420 Spico_1102 Sphaerochaeta coccoides DSM 17374 radical SAM enzyme, Cfr family YP_004411705.1 1270038 D 760011 CDS YP_004411706.1 330837065 10495421 complement(1271149..1272945) 1 NC_015436.1 COGs: COG0013 Alanyl-tRNA synthetase; InterPro IPR018164:IPR012947:IPR002318; KEGG: ssm:Spirs_3146 alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc, N-terminal; Threonyl/alanyl tRNA synthetase, SAD; SMART: Threonyl/alanyl tRNA synthetase, SAD; SPTR: Alanyl-tRNA synthetase; TIGRFAM: Alanyl-tRNA synthetase, class IIc; IMG reference gene:2503957410; PFAM: Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase; alanyl-tRNA synthetase 1272945 10495421 Spico_1103 Sphaerochaeta coccoides DSM 17374 alanyl-tRNA synthetase YP_004411706.1 1271149 R 760011 CDS YP_004411707.1 330837066 10495422 complement(1273039..1273974) 1 NC_015436.1 COGs: COG0758 Rossmann fold nucleotide-binding protein involved in DNA uptake; InterPro IPR003488; KEGG: kko:Kkor_2616 DNA protecting protein DprA; PFAM: DNA recombination-mediator protein A; SPTR: uncharacterized protein; IMG reference gene:2503957411; PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA; SMF family protein 1273974 10495422 Spico_1104 Sphaerochaeta coccoides DSM 17374 SMF family protein YP_004411707.1 1273039 R 760011 CDS YP_004411708.1 330837067 10495424 complement(1274338..1274865) 1 NC_015436.1 COGs: COG1335 Amidase related to nicotinamidase; KEGG: ele:Elen_0388 conserved hypothetical protein, amidase; SPTR: uncharacterized protein; IMG reference gene:2503957413; PFAM: Isochorismatase; amidase 1274865 10495424 Spico_1105 Sphaerochaeta coccoides DSM 17374 amidase YP_004411708.1 1274338 R 760011 CDS YP_004411709.1 330837068 10495425 1274900..1275931 1 NC_015436.1 COGs: COG1957 Inosine-uridine nucleoside N-ribohydrolase; InterPro IPR001910; KEGG: str:Sterm_3734 ribosylpyrimidine nucleosidase; PFAM: Inosine/uridine-preferring nucleoside hydrolase domain; PRIAM: Ribosylpyrimidine nucleosidase; SPTR: Ribosylpyrimidine nucleosidase; IMG reference gene:2503957414; PFAM: Inosine-uridine preferring nucleoside hydrolase; ribosylpyrimidine nucleosidase 1275931 10495425 Spico_1106 Sphaerochaeta coccoides DSM 17374 ribosylpyrimidine nucleosidase YP_004411709.1 1274900 D 760011 CDS YP_004411710.1 330837069 10495426 complement(1275983..1276606) 1 NC_015436.1 COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: sdl:Sdel_1154 nitroreductase; PFAM: Nitroreductase-like; SPTR: Nitroreductase; IMG reference gene:2503957415; PFAM: Nitroreductase; nitroreductase 1276606 10495426 Spico_1107 Sphaerochaeta coccoides DSM 17374 nitroreductase YP_004411710.1 1275983 R 760011 CDS YP_004411711.1 330837070 10495427 complement(1276666..1277403) 1 NC_015436.1 COGs: COG0813 Purine-nucleoside phosphorylase; InterPro IPR000845; KEGG: csh:Closa_1682 purine nucleoside phosphorylase; PFAM: Nucleoside phosphorylase domain; PRIAM: Purine-nucleoside phosphorylase; SPTR: Purine nucleoside phosphorylase deoD-type; IMG reference gene:2503957416; PFAM: Phosphorylase superfamily; TIGRFAM: purine-nucleoside phosphorylase, family 1 (deoD); purine-nucleoside phosphorylase 1277403 10495427 Spico_1108 Sphaerochaeta coccoides DSM 17374 purine-nucleoside phosphorylase YP_004411711.1 1276666 R 760011 CDS YP_004411712.1 330837071 10495428 complement(1277403..1278311) 1 NC_015436.1 COGs: COG1079 ABC-type transport system permease component; InterPro IPR001851; KEGG: amt:Amet_3583 inner-membrane translocator; PFAM: ABC transporter permease; SPTR: uncharacterized protein; IMG reference gene:2503957417; PFAM: Branched-chain amino acid transport system / permease component; nucleoside ABC transporter membrane protein 1278311 10495428 Spico_1109 Sphaerochaeta coccoides DSM 17374 nucleoside ABC transporter membrane protein YP_004411712.1 1277403 R 760011 CDS YP_004411713.1 330837072 10495429 complement(1278308..1279432) 1 NC_015436.1 COGs: COG4603 ABC-type uncharacterized transport system permease component; InterPro IPR001851; KEGG: sta:STHERM_c17730 permease; PFAM: ABC transporter permease; SPTR: Carbohydrate uptake 2 (CUT2) family, permease; IMG reference gene:2503957418; PFAM: Branched-chain amino acid transport system / permease component; inner-membrane translocator 1279432 10495429 Spico_1110 Sphaerochaeta coccoides DSM 17374 inner-membrane translocator YP_004411713.1 1278308 R 760011 CDS YP_004411714.1 330837073 10495430 complement(1279429..1280970) 1 NC_015436.1 COGs: COG3845 ABC-type uncharacterized transport systems ATPase components; InterPro IPR003439:IPR003593; KEGG: aoe:Clos_0964 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; IMG reference gene:2503957419; PFAM: ABC transporter; nucleoside ABC transporter ATP-binding protein 1280970 10495430 Spico_1111 Sphaerochaeta coccoides DSM 17374 nucleoside ABC transporter ATP-binding protein YP_004411714.1 1279429 R 760011 CDS YP_004411715.1 330837074 10495431 complement(1281134..1282237) 1 NC_015436.1 COGs: COG1744 Uncharacterized ABC-type transport system periplasmic component/surface lipoprotein; InterPro IPR003760; KEGG: sta:STHERM_c17750 membrane lipoprotein TmpC precursor; PFAM: Basic membrane lipoprotein; SPTR: uncharacterized protein; IMG reference gene:2503957420; PFAM: Basic membrane protein; basic membrane lipoprotein 1282237 10495431 Spico_1112 Sphaerochaeta coccoides DSM 17374 basic membrane lipoprotein YP_004411715.1 1281134 R 760011 CDS YP_004411716.1 330837075 10495432 1282452..1283216 1 NC_015436.1 COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: sfu:Sfum_1750 cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter-like; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Cobalt ABC transporter, ATPase subunit; IMG reference gene:2503957421; PFAM: ABC transporter; Fe(3+)-transporting ATPase 1283216 10495432 Spico_1113 Sphaerochaeta coccoides DSM 17374 Fe(3+)-transporting ATPase YP_004411716.1 1282452 D 760011 CDS YP_004411717.1 330837076 10495433 1283201..1283929 1 NC_015436.1 COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339; KEGG: dal:Dalk_0379 cobalt transport protein; PFAM: Cobalt transport protein; SPTR: Cobalt transport protein; IMG reference gene:2503957422; PFAM: Cobalt transport protein; cobalt transport protein 1283929 10495433 Spico_1114 Sphaerochaeta coccoides DSM 17374 cobalt transport protein YP_004411717.1 1283201 D 760011 CDS YP_004411718.1 330837077 10495434 1283977..1284603 1 NC_015436.1 COGs: COG0212 5-formyltetrahydrofolate cyclo-ligase; InterPro IPR002698; KEGG: bha:BH1417 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; SPTR: 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; IMG reference gene:2503957423; PFAM: 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase; 5-formyltetrahydrofolate cyclo-ligase 1284603 10495434 Spico_1115 Sphaerochaeta coccoides DSM 17374 5-formyltetrahydrofolate cyclo-ligase YP_004411718.1 1283977 D 760011 CDS YP_004411719.1 330837078 10495435 complement(1284557..1285111) 1 NC_015436.1 COGs: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); KEGG: ssm:Spirs_1642 PTS IIA-like nitrogen-regulatory protein PtsN; SPTR: uncharacterized protein; IMG reference gene:2503957424; PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 1285111 10495435 Spico_1116 Sphaerochaeta coccoides DSM 17374 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_004411719.1 1284557 R 760011 CDS YP_004411720.1 330837079 10495436 complement(1285162..1286649) 1 NC_015436.1 COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR013027:IPR006004; KEGG: dap:Dacet_0223 glutamate synthase (NADPH), homotetrameric; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: Glutamate synthase (NADPH); SPTR: Glutamate synthase (NADPH), homotetrameric; TIGRFAM: Glutamate synthase (NADPH), homotetrameric; IMG reference gene:2503957425; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthase (NADPH), homotetrameric; sulfide dehydrogenase (flavoprotein) subunit SudA 1286649 10495436 Spico_1117 Sphaerochaeta coccoides DSM 17374 sulfide dehydrogenase (flavoprotein) subunit SudA YP_004411720.1 1285162 R 760011 CDS YP_004411721.1 330837080 10495437 complement(1286671..1287504) 1 NC_015436.1 COGs: COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase; InterPro IPR001433:IPR019480; KEGG: ssm:Spirs_1640 oxidoreductase FAD/NAD(P)-binding domain protein; PFAM: Oxidoreductase FAD/NAD(P)-binding; Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; SPTR: Ferredoxin--NADP; IMG reference gene:2503957426; PFAM: Oxidoreductase FAD-binding domain; Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain; sulfide dehydrogenase (flavoprotein) subunit SudB 1287504 10495437 Spico_1118 Sphaerochaeta coccoides DSM 17374 sulfide dehydrogenase (flavoprotein) subunit SudB YP_004411721.1 1286671 R 760011 CDS YP_004411722.1 330837081 10495438 complement(1287873..1288319) 1 NC_015436.1 COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: rfe:RF_1004 small heat shock protein; PFAM: Heat shock protein Hsp20; SPTR: Small heat shock protein C2; IMG reference gene:2503957427; PFAM: Hsp20/alpha crystallin family; heat shock protein Hsp20 1288319 10495438 Spico_1119 Sphaerochaeta coccoides DSM 17374 heat shock protein Hsp20 YP_004411722.1 1287873 R 760011 CDS YP_004411723.1 330837082 10495439 complement(1288647..1289450) 1 NC_015436.1 COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: csh:Closa_2870 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator, AraC family; IMG reference gene:2503957428; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator 1289450 10495439 Spico_1120 Sphaerochaeta coccoides DSM 17374 AraC family transcriptional regulator YP_004411723.1 1288647 R 760011 CDS YP_004411724.1 330837083 10495440 1289655..1290623 1 NC_015436.1 COGs: COG4606 ABC-type enterochelin transport system permease component; InterPro IPR000522; KEGG: csh:Closa_2869 transport system permease; PFAM: ABC transporter permease; SPTR: Transport system permease; IMG reference gene:2503957429; PFAM: FecCD transport family; transport system permease 1290623 10495440 Spico_1121 Sphaerochaeta coccoides DSM 17374 transport system permease YP_004411724.1 1289655 D 760011 CDS YP_004411725.1 330837084 10495441 1290610..1291572 1 NC_015436.1 COGs: COG4605 ABC-type enterochelin transport system permease component; InterPro IPR000522; KEGG: csh:Closa_2868 transport system permease; PFAM: ABC transporter permease; SPTR: Transport system permease; IMG reference gene:2503957430; PFAM: FecCD transport family; transport system permease 1291572 10495441 Spico_1122 Sphaerochaeta coccoides DSM 17374 transport system permease YP_004411725.1 1290610 D 760011 CDS YP_004411726.1 330837085 10495442 1291569..1292327 1 NC_015436.1 COGs: COG4604 ABC-type enterochelin transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: bcy:Bcer98_0361 ABC transporter-related protein; PFAM: ABC transporter-like; PRIAM: Iron-chelate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter-related protein; IMG reference gene:2503957431; PFAM: ABC transporter; iron-chelate-transporting ATPase 1292327 10495442 Spico_1123 Sphaerochaeta coccoides DSM 17374 iron-chelate-transporting ATPase YP_004411726.1 1291569 D 760011 CDS YP_004411727.1 330837086 10495443 1292377..1293339 1 NC_015436.1 COGs: COG4607 ABC-type enterochelin transport system periplasmic component; InterPro IPR002491; KEGG: csh:Closa_2866 periplasmic binding protein; PFAM: Periplasmic binding protein; SPTR: Periplasmic binding protein; IMG reference gene:2503957432; PFAM: Periplasmic binding protein; periplasmic binding protein 1293339 10495443 Spico_1124 Sphaerochaeta coccoides DSM 17374 periplasmic binding protein YP_004411727.1 1292377 D 760011 CDS YP_004411728.1 330837087 10495444 1293817..1296435 1 NC_015436.1 COGs: COG1203 helicase; InterPro IPR001650:IPR006483:IPR006474:IPR014001; KEGG: paa:Paes_1419 CRISPR-associated helicase Cas3; PFAM: Helicase, C-terminal; SMART: Helicase, C-terminal; DEAD-like helicase, N-terminal; SPTR: CRISPR-associated helicase Cas3; TIGRFAM: Helicase Cas3, CRISPR-associated, core; CRISPR-associated HD domain; IMG reference gene:2503957433; PFAM: DEAD/DEAH box helicase; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated endonuclease Cas3-HD; CRISPR-associated helicase Cas3 1296435 10495444 Spico_1125 Sphaerochaeta coccoides DSM 17374 CRISPR-associated helicase Cas3 YP_004411728.1 1293817 D 760011 CDS YP_004411729.1 330837088 10495445 1296429..1297937 1 NC_015436.1 InterPro IPR013381; KEGG: paa:Paes_1418 CRISPR-associated protein, CSE1 family; PFAM: CRISPR-associated protein Cse1; SPTR: CRISPR-associated protein, Cse1 family; TIGRFAM: CRISPR-associated protein Cse1; IMG reference gene:2503957434; PFAM: CRISPR-associated protein Cse1 (CRISPR_cse1); TIGRFAM: CRISPR type I-E/ECOLI-associated protein CasA/Cse1; Cse1 family CRISPR-associated protein 1297937 10495445 Spico_1126 Sphaerochaeta coccoides DSM 17374 Cse1 family CRISPR-associated protein YP_004411729.1 1296429 D 760011 CDS YP_004411730.1 330837089 10495446 1297927..1298454 1 NC_015436.1 InterPro IPR013382; KEGG: dze:Dd1591_0910 CRISPR-associated protein, CSE2 family; PFAM: CRISPR-associated protein Cse2; SPTR: CRISPR-associated protein, Cse2 family; TIGRFAM: CRISPR-associated protein Cse2; IMG reference gene:2503957435; PFAM: CRISPR-associated protein Cse2 (CRISPR_cse2); TIGRFAM: CRISPR type I-E/ECOLI-associated protein CasB/Cse2; Cse2 family CRISPR-associated protein 1298454 10495446 Spico_1127 Sphaerochaeta coccoides DSM 17374 Cse2 family CRISPR-associated protein YP_004411730.1 1297927 D 760011 CDS YP_004411731.1 330837090 10495447 1298451..1299047 1 NC_015436.1 InterPro IPR010179; KEGG: dal:Dalk_4936 CRISPR-associated protein, CSE3 family; PFAM: CRISPR-associated protein, CT1974; SPTR: CRISPR-associated protein, Cse3 family; TIGRFAM: CRISPR-associated protein, CT1974; IMG reference gene:2503957436; PFAM: CRISPR associated protein; TIGRFAM: CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI; CRISPR-associated protein, Cse3 family 1299047 10495447 Spico_1128 Sphaerochaeta coccoides DSM 17374 CRISPR-associated protein, Cse3 family YP_004411731.1 1298451 D 760011 CDS YP_004411732.1 330837091 10495448 1299044..1300117 1 NC_015436.1 InterPro IPR010148; KEGG: dze:Dd1591_0908 CRISPR-associated protein, CSE4 family; PFAM: CRISPR-associated protein, CT1975; SPTR: CRISPR-associated protein, Cse4 family; TIGRFAM: CRISPR-associated protein, CT1975; IMG reference gene:2503957437; PFAM: CT1975-like protein; TIGRFAM: CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI; CRISPR-associated protein, Cse4 family 1300117 10495448 Spico_1129 Sphaerochaeta coccoides DSM 17374 CRISPR-associated protein, Cse4 family YP_004411732.1 1299044 D 760011 CDS YP_004411733.1 330837092 10495449 1300128..1300826 1 NC_015436.1 InterPro IPR010147:IPR013422; KEGG: cpb:Cphamn1_2163 CRISPR-associated protein Cas5 family; SPTR: CRISPR-associated protein Cas5 family; TIGRFAM: CRISPR-associated protein, Cas5e-type; CRISPR-associated protein Cas5, N-terminal domain; IMG reference gene:2503957438; PFAM: CRISPR-associated protein (Cas_Cas5); TIGRFAM: CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI; CRISPR-associated protein Cas5, N-terminal domain; CRISPR-associated protein Cas5 family 1300826 10495449 Spico_1130 Sphaerochaeta coccoides DSM 17374 CRISPR-associated protein Cas5 family YP_004411733.1 1300128 D 760011 CDS YP_004411734.1 330837093 10495450 1300826..1301671 1 NC_015436.1 COGs: COG1518 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR002729:IPR019851; KEGG: dal:Dalk_4939 CRISPR-associated protein Cas1; PFAM: CRISPR-associated protein Cas1; SPTR: CRISPR-associated protein Cas1; TIGRFAM: CRISPR-associated protein Cas1, ECOLI subtype; CRISPR-associated protein Cas1; IMG reference gene:2503957439; PFAM: CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated endonuclease Cas1; CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI; CRISPR-associated protein, Cas1 family 1301671 10495450 Spico_1131 Sphaerochaeta coccoides DSM 17374 CRISPR-associated protein, Cas1 family YP_004411734.1 1300826 D 760011 CDS YP_004411735.1 330837094 10495451 1301674..1301952 1 NC_015436.1 InterPro IPR010152; KEGG: dal:Dalk_4940 CRISPR-associated protein Cas2; PFAM: CRISPR-associated protein Cas2 subtype; SPTR: CRISPR-associated protein, Cas2; TIGRFAM: CRISPR-associated protein Cas2 subtype; IMG reference gene:2503957440; PFAM: CRISPR-associated protein (Cas_Cas2CT1978); TIGRFAM: CRISPR-associated endoribonuclease Cas2, subtype I-E/ECOLI; CRISPR-associated protein, Cas2 family 1301952 10495451 Spico_1132 Sphaerochaeta coccoides DSM 17374 CRISPR-associated protein, Cas2 family YP_004411735.1 1301674 D 760011 CDS YP_004411736.1 330837095 10495453 1306971..1307561 1 NC_015436.1 KEGG: yps:YPTB1831 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957442; hypothetical protein 1307561 10495453 Spico_1134 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411736.1 1306971 D 760011 CDS YP_004411737.1 330837096 10495455 1308055..1308450 1 NC_015436.1 KEGG: ton:TON_0298 ABC-type iron(III)-siderophore transport system, ATPase component; SPTR: ABC-type iron(III)-siderophore transport system, ATPase component; IMG reference gene:2503957444; hypothetical protein 1308450 10495455 Spico_1136 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411737.1 1308055 D 760011 CDS YP_004411738.1 330837097 10495456 complement(1308619..1309524) 1 NC_015436.1 KEGG: sgl:SG1747 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957445; PFAM: Domain of unknown function (DUF3427); hypothetical protein 1309524 10495456 Spico_1137 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411738.1 1308619 R 760011 CDS YP_004411739.1 330837098 10495458 1310625..1311086 1 NC_015436.1 KEGG: brm:Bmur_2766 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957447; hypothetical protein 1311086 10495458 Spico_1139 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411739.1 1310625 D 760011 CDS YP_004411740.1 330837099 10495459 1311041..1311247 1 NC_015436.1 KEGG: aau:AAur_3200 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957448; PFAM: Host cell surface-exposed lipoprotein; hypothetical protein 1311247 10495459 Spico_1140 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411740.1 1311041 D 760011 CDS YP_004411741.1 330837100 10495461 complement(1314184..1315683) 1 NC_015436.1 COGs: COG2865 transcriptional regulator protein; InterPro IPR007421; KEGG: gka:GK0575 hypothetical protein; PFAM: ATPase, AAA-4; SPTR: uncharacterized protein; IMG reference gene:2503957450; PFAM: Divergent AAA domain; transcriptional regulator 1315683 10495461 Spico_1142 Sphaerochaeta coccoides DSM 17374 transcriptional regulator YP_004411741.1 1314184 R 760011 CDS YP_004411742.1 330837101 10495462 complement(1316190..1316351) 1 NC_015436.1 SPTR: uncharacterized protein; IMG reference gene:2503957451; hypothetical protein 1316351 10495462 Spico_1143 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411742.1 1316190 R 760011 CDS YP_004411743.1 330837102 10495463 complement(1316355..1316966) 1 NC_015436.1 KEGG: pru:PRU_1109 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957452; hypothetical protein 1316966 10495463 Spico_1144 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411743.1 1316355 R 760011 CDS YP_004411744.1 330837103 10495464 complement(1317114..1317875) 1 NC_015436.1 KEGG: vex:VEA_002903 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957453; hypothetical protein 1317875 10495464 Spico_1145 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411744.1 1317114 R 760011 CDS YP_004411745.1 330837104 10495466 1318115..1318636 1 NC_015436.1 KEGG: hwa:HQ2045A phosphoesterase; SPTR: uncharacterized protein; IMG reference gene:2503957455; hypothetical protein 1318636 10495466 Spico_1147 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411745.1 1318115 D 760011 CDS YP_004411746.1 330837105 10495467 complement(1318713..1318862) 1 NC_015436.1 KEGG: cce:Ccel_2675 transposase mutator type; SPTR: Transposase; IMG reference gene:2503957456; transposase mutator type 1318862 10495467 Spico_1148 Sphaerochaeta coccoides DSM 17374 transposase mutator type YP_004411746.1 1318713 R 760011 CDS YP_004411747.1 330837106 10495468 complement(1319131..1319457) 1 NC_015436.1 KEGG: csa:Csal_0698 cell division protein ZipA; SPTR: Cell division protein zipA; IMG reference gene:2503957457; hypothetical protein 1319457 10495468 Spico_1149 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411747.1 1319131 R 760011 CDS YP_004411748.1 330837107 10495469 complement(1322087..1322668) 1 NC_015436.1 InterPro IPR013396; KEGG: mct:MCR_0030 CRISPR-associated Csy4 family protein; PFAM: CRISPR-associated protein Csy4; SPTR: uncharacterized protein; TIGRFAM: CRISPR-associated protein Csy4; IMG reference gene:2503957458; PFAM: CRISPR-associated protein (Cas_Csy4); TIGRFAM: CRISPR-associated protein Cas6/Csy4, subtype I-F/YPEST; CRISPR-associated protein, Csy4 family 1322668 10495469 Spico_1150 Sphaerochaeta coccoides DSM 17374 CRISPR-associated protein, Csy4 family YP_004411748.1 1322087 R 760011 CDS YP_004411749.1 330837108 10495470 complement(1322678..1323712) 1 NC_015436.1 InterPro IPR013399; KEGG: abb:ABBFA_000985 CRISPR-associated protein (Cas_Csy3) family protein; PFAM: CRISPR-associated protein Csy3; SPTR: CRISPR-associated protein, Csy3 family protein; TIGRFAM: CRISPR-associated protein Csy3; IMG reference gene:2503957459; PFAM: CRISPR-associated protein (Cas_Csy3); TIGRFAM: CRISPR type I-F/YPEST-associated protein Csy3; CRISPR-associated protein, Csy3 family 1323712 10495470 Spico_1151 Sphaerochaeta coccoides DSM 17374 CRISPR-associated protein, Csy3 family YP_004411749.1 1322678 R 760011 CDS YP_004411750.1 330837109 10495471 complement(1323714..1324607) 1 NC_015436.1 InterPro IPR013398; KEGG: abb:ABBFA_000984 CRISPR-associated protein (Cas_Csy2) family protein; PFAM: CRISPR-associated protein Csy2; SPTR: uncharacterized protein; TIGRFAM: CRISPR-associated protein Csy2; IMG reference gene:2503957460; PFAM: CRISPR-associated protein (Cas_Csy2); TIGRFAM: CRISPR type I-F/YPEST-associated protein Csy2; CRISPR-associated protein, Csy2 family 1324607 10495471 Spico_1152 Sphaerochaeta coccoides DSM 17374 CRISPR-associated protein, Csy2 family YP_004411750.1 1323714 R 760011 CDS YP_004411751.1 330837110 10495472 complement(1324604..1325806) 1 NC_015436.1 InterPro IPR013397; KEGG: abb:ABBFA_000983 hypothetical protein; PFAM: CRISPR-associated protein Csy1; SPTR: Crispr-associated protein, Csy1 family; TIGRFAM: CRISPR-associated protein Csy1; IMG reference gene:2503957461; PFAM: CRISPR-associated protein (Cas_Csy1); TIGRFAM: CRISPR type I-F/YPEST-associated protein Csy1; CRISPR-associated protein, Csy1 family 1325806 10495472 Spico_1153 Sphaerochaeta coccoides DSM 17374 CRISPR-associated protein, Csy1 family YP_004411751.1 1324604 R 760011 CDS YP_004411752.1 330837111 10495473 complement(1325827..1329120) 1 NC_015436.1 COGs: COG1203 helicase; InterPro IPR013395; KEGG: shw:Sputw3181_2190 CRISPR-associated helicase Cas3 family protein; SPTR: uncharacterized protein; TIGRFAM: Helicase Cas3, CRISPR-associated, Yersinia-type; IMG reference gene:2503957462; TIGRFAM: CRISPR-associated helicase Cas3, subtype I-F/YPEST; CRISPR-associated helicase Cas3 family 1329120 10495473 Spico_1154 Sphaerochaeta coccoides DSM 17374 CRISPR-associated helicase Cas3 family YP_004411752.1 1325827 R 760011 CDS YP_004411753.1 330837112 10495474 complement(1329117..1330094) 1 NC_015436.1 COGs: COG1518 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR002729:IPR019857; KEGG: abb:ABBFA_000981 CRISPR-associated protein Cas1; PFAM: CRISPR-associated protein Cas1; SPTR: uncharacterized protein; TIGRFAM: CRISPR-associated protein Cas1, YPEST subtype; CRISPR-associated protein Cas1; IMG reference gene:2503957463; PFAM: CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated endonuclease Cas1, subtype I-F/YPEST; CRISPR-associated endonuclease Cas1; CRISPR-associated protein, Cas1 family 1330094 10495474 Spico_1155 Sphaerochaeta coccoides DSM 17374 CRISPR-associated protein, Cas1 family YP_004411753.1 1329117 R 760011 CDS YP_004411754.1 330837113 10495475 1330282..1330578 1 NC_015436.1 KEGG: fjo:Fjoh_2814 proline dehydrogenase; SPTR: uncharacterized protein; IMG reference gene:2503957464; hypothetical protein 1330578 10495475 Spico_1156 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411754.1 1330282 D 760011 CDS YP_004411755.1 330837114 10495476 complement(1330679..1330807) 1 NC_015436.1 KEGG: cce:Ccel_2675 transposase mutator type; SPTR: Transposase; IMG reference gene:2503957465; transposase mutator type 1330807 10495476 Spico_1157 Sphaerochaeta coccoides DSM 17374 transposase mutator type YP_004411755.1 1330679 R 760011 CDS YP_004411756.1 330837115 10495477 complement(1330935..1332119) 1 NC_015436.1 InterPro IPR011701; KEGG: cbt:CLH_1564 transport protein; PFAM: Major facilitator superfamily MFS-1; SPTR: Transport protein; IMG reference gene:2503957466; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein 1332119 10495477 Spico_1158 Sphaerochaeta coccoides DSM 17374 major facilitator superfamily protein YP_004411756.1 1330935 R 760011 CDS YP_004411757.1 330837116 10495478 complement(1332124..1332948) 1 NC_015436.1 COGs: COG1533 DNA repair photolyase; InterPro IPR007197; KEGG: scb:SCAB_43781 hypothetical protein; PFAM: Radical SAM; SPTR: Radical SAM domain protein; IMG reference gene:2503957467; PFAM: Radical SAM superfamily; radical SAM protein 1332948 10495478 Spico_1159 Sphaerochaeta coccoides DSM 17374 radical SAM protein YP_004411757.1 1332124 R 760011 CDS YP_004411758.1 330837117 10495479 complement(1332923..1333120) 1 NC_015436.1 KEGG: clj:CLJU_c32650 prevent-host-death protein; SPTR: prevent-host-death protein; IMG reference gene:2503957468; hypothetical protein 1333120 10495479 Spico_1160 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411758.1 1332923 R 760011 CDS YP_004411759.1 330837118 10495480 complement(1333234..1334670) 1 NC_015436.1 COGs: COG2865 transcriptional regulator protein; InterPro IPR007421; KEGG: pgi:PG1526 hypothetical protein; PFAM: ATPase, AAA-4; SPTR: Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen; IMG reference gene:2503957469; PFAM: Divergent AAA domain; transcriptional regulator 1334670 10495480 Spico_1161 Sphaerochaeta coccoides DSM 17374 transcriptional regulator YP_004411759.1 1333234 R 760011 CDS YP_004411760.1 330837119 10495482 complement(1335054..1336223) 1 NC_015436.1 InterPro IPR018891; KEGG: bai:BAA_3824 hypothetical protein; PFAM: Abortive phage infection; SPTR: uncharacterized protein; IMG reference gene:2503957471; PFAM: AIPR protein; Abortive phage infection protein 1336223 10495482 Spico_1163 Sphaerochaeta coccoides DSM 17374 Abortive phage infection protein YP_004411760.1 1335054 R 760011 CDS YP_004411761.1 330837120 10495484 complement(1336589..1337812) 1 NC_015436.1 KEGG: cac:CA_C0063 hypothetical protein; SPTR: tail fiber; IMG reference gene:2503957473; hypothetical protein 1337812 10495484 Spico_1165 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411761.1 1336589 R 760011 CDS YP_004411762.1 330837121 10495485 complement(1337809..1345668) 1 NC_015436.1 KEGG: ssm:Spirs_2813 hypothetical protein; SPTR: Phage minor structural protein, ; IMG reference gene:2503957474; hypothetical protein 1345668 10495485 Spico_1166 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411762.1 1337809 R 760011 CDS YP_004411763.1 330837122 10495486 complement(1345668..1348451) 1 NC_015436.1 KEGG: ppg:PputGB1_1758 hypothetical protein; SPTR: LigA; IMG reference gene:2503957475; hypothetical protein 1348451 10495486 Spico_1167 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411763.1 1345668 R 760011 CDS YP_004411764.1 330837123 10495487 complement(1348455..1349240) 1 NC_015436.1 KEGG: dre:497403 im:7140452; SPTR: Tail tape meausure protein; IMG reference gene:2503957476; hypothetical protein 1349240 10495487 Spico_1168 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411764.1 1348455 R 760011 CDS YP_004411765.1 330837124 10495488 complement(1349237..1357840) 1 NC_015436.1 KEGG: ssm:Spirs_2813 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957477; hypothetical protein 1357840 10495488 Spico_1169 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411765.1 1349237 R 760011 CDS YP_004411766.1 330837125 10495489 complement(1357837..1360422) 1 NC_015436.1 KEGG: sha:SH1165 hypothetical protein; SPTR: Similar to FmtB/extracellular matrix binding protein; IMG reference gene:2503957478; hypothetical protein 1360422 10495489 Spico_1170 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411766.1 1357837 R 760011 CDS YP_004411767.1 330837126 10495491 1361022..1361192 1 NC_015436.1 IMG reference gene:2503957480; PFAM: Oxaloacetate decarboxylase, gamma chain; hypothetical protein 1361192 10495491 Spico_1172 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411767.1 1361022 D 760011 CDS YP_004411768.1 330837127 10495492 1361182..1362318 1 NC_015436.1 COGs: COG1883 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit; InterPro IPR005661; KEGG: csc:Csac_2482 sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; PRIAM: Glutaconyl-CoA decarboxylase; SPTR: Glutaconyl-CoA decarboxylase beta subunit; TIGRFAM: Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; IMG reference gene:2503957481; PFAM: subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; glutaconate CoA transferase subunit B 1362318 10495492 Spico_1173 Sphaerochaeta coccoides DSM 17374 glutaconate CoA transferase subunit B YP_004411768.1 1361182 D 760011 CDS YP_004411769.1 330837128 10495493 complement(1362403..1363080) 1 NC_015436.1 COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR003148:IPR006037; KEGG: cpy:Cphy_1928 TrkA domain-containing protein; PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; SPTR: Potassium uptake protein; IMG reference gene:2503957482; PFAM: TrkA-N domain; TrkA-C domain; TrkA-N domain-containing protein 1363080 10495493 Spico_1174 Sphaerochaeta coccoides DSM 17374 TrkA-N domain-containing protein YP_004411769.1 1362403 R 760011 CDS YP_004411770.1 330837129 10495494 complement(1363097..1364389) 1 NC_015436.1 COGs: COG0168 Trk-type K+ transport systems membrane components; InterPro IPR003445; KEGG: cpy:Cphy_1927 H(+)-transporting two-sector ATPase; PFAM: Cation transporter; PRIAM: H(+)-transporting two-sector ATPase; SPTR: H(+)-transporting two-sector ATPase; IMG reference gene:2503957483; PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family; H(+)-transporting two-sector ATPase 1364389 10495494 Spico_1175 Sphaerochaeta coccoides DSM 17374 H(+)-transporting two-sector ATPase YP_004411770.1 1363097 R 760011 CDS YP_004411771.1 330837130 10495496 1365108..1366457 1 NC_015436.1 COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR003148:IPR006037; KEGG: dap:Dacet_2986 TrkA-N domain protein; PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; SPTR: TrkA-N domain protein; IMG reference gene:2503957485; PFAM: TrkA-N domain; TrkA-C domain; TrkA-N domain-containing protein 1366457 10495496 Spico_1176 Sphaerochaeta coccoides DSM 17374 TrkA-N domain-containing protein YP_004411771.1 1365108 D 760011 CDS YP_004411772.1 330837131 10495497 1366468..1367922 1 NC_015436.1 COGs: COG0168 Trk-type K+ transport systems membrane components; InterPro IPR003445; KEGG: ddf:DEFDS_1538 K+ transport (Trk) system membrane component; PFAM: Cation transporter; SPTR: K+ transport (Trk) system, membrane component; IMG reference gene:2503957486; PFAM: Cation transport protein; cation transporter 1367922 10495497 Spico_1177 Sphaerochaeta coccoides DSM 17374 cation transporter YP_004411772.1 1366468 D 760011 CDS YP_004411773.1 330837132 10495498 1367931..1368659 1 NC_015436.1 KEGG: clj:CLJU_c17880 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957487; PFAM: DNA alkylation repair enzyme; hypothetical protein 1368659 10495498 Spico_1178 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411773.1 1367931 D 760011 CDS YP_004411774.1 330837133 10495499 complement(1368705..1369700) 1 NC_015436.1 COGs: COG2355 Zn-dependent dipeptidase microsomal dipeptidase homolog; InterPro IPR008257; KEGG: ctc:CTC00571 membrane dipeptidase; PFAM: Peptidase M19, renal dipeptidase; SPTR: Membrane dipeptidase; IMG reference gene:2503957488; PFAM: Membrane dipeptidase (Peptidase M19); peptidase M19 1369700 10495499 Spico_1179 Sphaerochaeta coccoides DSM 17374 peptidase M19 YP_004411774.1 1368705 R 760011 CDS YP_004411775.1 330837134 10495500 1369993..1370307 1 NC_015436.1 COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR013766:IPR005746; KEGG: ddf:DEFDS_1167 thioredoxin; PFAM: Thioredoxin domain; SPTR: Thioredoxin; TIGRFAM: Thioredoxin; IMG reference gene:2503957489; PFAM: Thioredoxin; TIGRFAM: thioredoxin; thioredoxin 1370307 10495500 Spico_1180 Sphaerochaeta coccoides DSM 17374 thioredoxin YP_004411775.1 1369993 D 760011 CDS YP_004411776.1 330837135 10495501 complement(1370437..1370946) 1 NC_015436.1 COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: har:HEAR2542 oxidoreductase; PFAM: Nitroreductase-like; SPTR: Nitroreductase; IMG reference gene:2503957490; PFAM: Nitroreductase; nitroreductase 1370946 10495501 Spico_1181 Sphaerochaeta coccoides DSM 17374 nitroreductase YP_004411776.1 1370437 R 760011 CDS YP_004411777.1 330837136 10495502 complement(1370922..1371857) 1 NC_015436.1 COGs: COG1284 conserved hypothetical protein; InterPro IPR003740:IPR019264; KEGG: mta:Moth_0235 hypothetical protein; PFAM: Protein of unknown function DUF161; Domain of unknown function DUF2179; SPTR: uncharacterized protein; IMG reference gene:2503957491; PFAM: Uncharacterized BCR, YitT family COG1284; Uncharacterized protein conserved in bacteria (DUF2179); hypothetical protein 1371857 10495502 Spico_1182 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411777.1 1370922 R 760011 CDS YP_004411778.1 330837137 10495503 complement(1372040..1373653) 1 NC_015436.1 COGs: COG0246 Mannitol-1-phosphate/altronate dehydrogenase; InterPro IPR013131:IPR013118; KEGG: cpy:Cphy_1062 mannitol dehydrogenase domain-containing protein; PFAM: Mannitol dehydrogenase, C-terminal; Mannitol dehydrogenase, N-terminal; PRIAM: Mannitol 2-dehydrogenase; SPTR: uncharacterized protein; IMG reference gene:2503957492; PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain; mannitol 2-dehydrogenase 1373653 10495503 Spico_1183 Sphaerochaeta coccoides DSM 17374 mannitol 2-dehydrogenase YP_004411778.1 1372040 R 760011 CDS YP_004411779.1 330837138 10495504 complement(1373690..1374361) 1 NC_015436.1 COGs: COG1802 Transcriptional regulators; InterPro IPR000524:IPR011711; KEGG: amt:Amet_3789 GntR family transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; GntR, C-terminal; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal; SPTR: Transcriptional regulator, GntR family; IMG reference gene:2503957493; PFAM: Bacterial regulatory proteins, gntR family; FCD domain; GntR family transcriptional regulator 1374361 10495504 Spico_1184 Sphaerochaeta coccoides DSM 17374 GntR family transcriptional regulator YP_004411779.1 1373690 R 760011 CDS YP_004411780.1 330837139 10495505 complement(1374390..1375475) 1 NC_015436.1 COGs: COG1312 D-mannonate dehydratase; HAMAP: Mannonate dehydratase; InterPro IPR004628; KEGG: bpb:bpr_I0685 D-mannonate dehydratase UxuA; PFAM: Mannonate dehydratase; PRIAM: Mannonate dehydratase; SPTR: uncharacterized protein; TIGRFAM: Mannonate dehydratase; IMG reference gene:2503957494; PFAM: D-mannonate dehydratase (UxuA); TIGRFAM: mannonate dehydratase; D-mannonate dehydratase 1375475 10495505 Spico_1185 Sphaerochaeta coccoides DSM 17374 D-mannonate dehydratase YP_004411780.1 1374390 R 760011 CDS YP_004411781.1 330837140 10495506 complement(1375648..1376607) 1 NC_015436.1 InterPro IPR000182; KEGG: ssm:Spirs_3745 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: uncharacterized protein; IMG reference gene:2503957495; PFAM: Acetyltransferase (GNAT) family; Uncharacterised protein family (UPF0158); N-acetyltransferase GCN5 1376607 10495506 Spico_1186 Sphaerochaeta coccoides DSM 17374 N-acetyltransferase GCN5 YP_004411781.1 1375648 R 760011 CDS YP_004411782.1 330837141 10495507 1376814..1378109 1 NC_015436.1 COGs: COG0148 Enolase; HAMAP: Enolase; InterPro IPR000941:IPR020811:IPR020810; KEGG: ssm:Spirs_3747 enolase; PFAM: Enolase, C-terminal; Enolase, N-terminal; PRIAM: Phosphopyruvate hydratase; SPTR: Enolase; TIGRFAM: Enolase; IMG reference gene:2503957496; PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase; enolase 1378109 10495507 Spico_1187 Sphaerochaeta coccoides DSM 17374 enolase YP_004411782.1 1376814 D 760011 CDS YP_004411783.1 330837142 10495508 complement(1378212..1379996) 1 NC_015436.1 COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006104; KEGG: sro:Sros_3323 beta-galactosidase; PFAM: Glycoside hydrolase, family 2, carbohydrate-binding; SPTR: Glycoside hydrolase 2 sugar binding; IMG reference gene:2503957497; PFAM: Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain; glycoside hydrolase 2 sugar binding protein 1379996 10495508 Spico_1188 Sphaerochaeta coccoides DSM 17374 glycoside hydrolase 2 sugar binding protein YP_004411783.1 1378212 R 760011 CDS YP_004411784.1 330837143 10495509 complement(1379993..1381303) 1 NC_015436.1 InterPro IPR011701; KEGG: sro:Sros_3322 hypothetical protein; PFAM: Major facilitator superfamily MFS-1; SPTR: uncharacterized protein; IMG reference gene:2503957498; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein 1381303 10495509 Spico_1189 Sphaerochaeta coccoides DSM 17374 major facilitator superfamily protein YP_004411784.1 1379993 R 760011 CDS YP_004411785.1 330837144 10495510 complement(1381514..1382119) 1 NC_015436.1 COGs: COG2137 conserved hypothetical protein; HAMAP: Regulatory protein RecX; InterPro IPR003783; KEGG: ssm:Spirs_3751 regulatory protein RecX; PFAM: Regulatory protein RecX; SPTR: Regulatory protein recX; IMG reference gene:2503957499; PFAM: RecX family; Regulatory protein recX 1382119 10495510 Spico_1190 Sphaerochaeta coccoides DSM 17374 Regulatory protein recX YP_004411785.1 1381514 R 760011 CDS YP_004411786.1 330837145 10495511 complement(1382144..1382563) 1 NC_015436.1 COGs: COG0103 Ribosomal protein S9; InterPro IPR000754; KEGG: ssm:Spirs_3752 ribosomal protein S9; PFAM: Ribosomal protein S9; SPTR: 30S ribosomal protein S9; IMG reference gene:2503957500; PFAM: Ribosomal protein S9/S16; 30S ribosomal protein S9 1382563 10495511 Spico_1191 Sphaerochaeta coccoides DSM 17374 30S ribosomal protein S9 YP_004411786.1 1382144 R 760011 CDS YP_004411787.1 330837146 10495512 complement(1382574..1383002) 1 NC_015436.1 COGs: COG0102 Ribosomal protein L13; InterPro IPR005822:IPR005823; KEGG: ssm:Spirs_3753 ribosomal protein L13; PFAM: Ribosomal protein L13; SPTR: 50S ribosomal protein L13; TIGRFAM: Ribosomal protein L13, bacterial-type; IMG reference gene:2503957501; PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type; 50S ribosomal protein L13 1383002 10495512 Spico_1192 Sphaerochaeta coccoides DSM 17374 50S ribosomal protein L13 YP_004411787.1 1382574 R 760011 CDS YP_004411788.1 330837147 10495513 complement(1383179..1384015) 1 NC_015436.1 KEGG: sta:STHERM_c21200 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957502; PFAM: Aminotransferase class-III; hypothetical protein 1384015 10495513 Spico_1193 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411788.1 1383179 R 760011 CDS YP_004411789.1 330837148 10495514 complement(1384019..1386445) 1 NC_015436.1 COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR000212; KEGG: ssm:Spirs_3757 UvrD/REP helicase; PFAM: DNA helicase, UvrD/REP type; SPTR: DNA helicase; IMG reference gene:2503957503; PFAM: UvrD/REP helicase; UvrD/REP helicase 1386445 10495514 Spico_1194 Sphaerochaeta coccoides DSM 17374 UvrD/REP helicase YP_004411789.1 1384019 R 760011 CDS YP_004411790.1 330837149 10495515 complement(1386442..1387818) 1 NC_015436.1 COGs: COG0621 2-methylthioadenine synthetase; HAMAP: Ribosomal protein S12 methylthiotransferase RimO; InterProIPR005840:IPR013848:IPR007197:IPR005839:IPR 006638; KEGG: sta:STHERM_c21230 hypothetical protein; PFAM: Methylthiotransferase, N-terminal; Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: uncharacterized protein; TIGRFAM: Ribosomal protein S12 methylthiotransferase RimO; Methylthiotransferase; IMG reference gene:2503957504; PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: ribosomal protein S12 methylthiotransferase RimO; radical SAM methylthiotransferase, MiaB/RimO family; Ribosomal protein S12 methylthiotransferase rimO 1387818 10495515 Spico_1195 Sphaerochaeta coccoides DSM 17374 Ribosomal protein S12 methylthiotransferase rimO YP_004411790.1 1386442 R 760011 CDS YP_004411791.1 330837150 10495516 1388008..1388937 1 NC_015436.1 COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: sta:STHERM_c02770 oligopeptide ABC transporter permease; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Oligopeptide ABC transporter, permease; IMG reference gene:2503957505; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 1388937 10495516 Spico_1196 Sphaerochaeta coccoides DSM 17374 binding-protein-dependent transport system inner membrane protein YP_004411791.1 1388008 D 760011 CDS YP_004411792.1 330837151 10495517 1388952..1390589 1 NC_015436.1 COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: sta:STHERM_c02780 oligopeptide ABC transporter permease, inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Oligopeptide ABC transporter, permease, inner membrane component; IMG reference gene:2503957506; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 1390589 10495517 Spico_1197 Sphaerochaeta coccoides DSM 17374 binding-protein-dependent transport system inner membrane protein YP_004411792.1 1388952 D 760011 CDS YP_004411793.1 330837152 10495518 1390599..1391684 1 NC_015436.1 COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterPro IPR003439:IPR013563:IPR010066:IPR003593; KEGG: sta:STHERM_c02790 oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; PRIAM: Nickel-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; IMG reference gene:2503957507; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; peptide ABC transporter ATPase 1391684 10495518 Spico_1198 Sphaerochaeta coccoides DSM 17374 peptide ABC transporter ATPase YP_004411793.1 1390599 D 760011 CDS YP_004411794.1 330837153 10495519 1391681..1392808 1 NC_015436.1 COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003439:IPR013563:IPR010066:IPR003593; KEGG: sta:STHERM_c02800 oligopeptide/dipeptide ABC transporter ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; PRIAM: Nickel-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Oligopeptide transporter; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; IMG reference gene:2503957508; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; peptide ABC transporter ATPase 1392808 10495519 Spico_1199 Sphaerochaeta coccoides DSM 17374 peptide ABC transporter ATPase YP_004411794.1 1391681 D 760011 CDS YP_004411795.1 330837154 10495520 complement(1392858..1393421) 1 NC_015436.1 KEGG: pst:PSPTO_3747 drug resistance transporter, EmrB/QacA family; SPTR: Cytochrome b; IMG reference gene:2503957509; hypothetical protein 1393421 10495520 Spico_1200 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411795.1 1392858 R 760011 CDS YP_004411796.1 330837155 10495521 1393703..1395385 1 NC_015436.1 COGs: COG4166 ABC-type oligopeptide transport system periplasmic component; InterPro IPR000914; KEGG: sta:STHERM_c02760 oligopeptide ABC transporter periplasmic oligopeptide-binding protein; PFAM: Bacterial extracellular solute-binding protein, family 5; SPTR: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein; IMG reference gene:2503957510; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; ABC transporter substrate-binding protein 1395385 10495521 Spico_1201 Sphaerochaeta coccoides DSM 17374 ABC transporter substrate-binding protein YP_004411796.1 1393703 D 760011 CDS YP_004411797.1 330837156 10495523 1395917..1396642 1 NC_015436.1 COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: bha:BH0818 bacitracin ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Polyamine-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: uncharacterized protein; IMG reference gene:2503957512; PFAM: ABC transporter; polyamine-transporting ATPase 1396642 10495523 Spico_1203 Sphaerochaeta coccoides DSM 17374 polyamine-transporting ATPase YP_004411797.1 1395917 D 760011 CDS YP_004411798.1 330837157 10495524 1396639..1397343 1 NC_015436.1 KEGG: ere:EUBREC_3043 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957513; hypothetical protein 1397343 10495524 Spico_1204 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411798.1 1396639 D 760011 CDS YP_004411799.1 330837158 10495525 complement(1397508..1398851) 1 NC_015436.1 COGs: COG1486 Alpha-galactosidase/6-phospho-beta-glucosidase 4 of glycosyl hydrolase; InterPro IPR001088; KEGG: csc:Csac_2748 glycoside hydrolase; PFAM: Glycoside hydrolase, family 4; PRIAM: Alpha-galactosidase; SPTR: Glycoside hydrolase 4; IMG reference gene:2503957514; PFAM: Family 4 glycosyl hydrolase; Family 4 glycosyl hydrolase C-terminal domain; alpha-galactosidase 1398851 10495525 Spico_1205 Sphaerochaeta coccoides DSM 17374 alpha-galactosidase YP_004411799.1 1397508 R 760011 CDS YP_004411800.1 330837159 10495526 1398976..1399713 1 NC_015436.1 COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR001789:IPR000005:IPR018060; KEGG: cpy:Cphy_0618 two component AraC family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; Signal transduction response regulator, receiver domain; SPTR: Two component transcriptional regulator, AraC family; IMG reference gene:2503957515; PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator 1399713 10495526 Spico_1206 Sphaerochaeta coccoides DSM 17374 AraC family transcriptional regulator YP_004411800.1 1398976 D 760011 CDS YP_004411801.1 330837160 10495528 complement(1401384..1402229) 1 NC_015436.1 COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: ate:Athe_2374 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503957517; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 2 1402229 10495528 Spico_1208 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter membrane protein 2 YP_004411801.1 1401384 R 760011 CDS YP_004411802.1 330837161 10495529 complement(1402226..1403110) 1 NC_015436.1 COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: ate:Athe_2375 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport system inner membrane component; IMG reference gene:2503957518; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 1403110 10495529 Spico_1209 Sphaerochaeta coccoides DSM 17374 binding-protein-dependent transport system inner membrane protein YP_004411802.1 1402226 R 760011 CDS YP_004411803.1 330837162 10495530 complement(1403218..1404492) 1 NC_015436.1 COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: ate:Athe_2376 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein family 1; IMG reference gene:2503957519; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein 1404492 10495530 Spico_1210 Sphaerochaeta coccoides DSM 17374 ABC transporter substrate-binding protein YP_004411803.1 1403218 R 760011 CDS YP_004411804.1 330837163 10495531 complement(1404641..1405678) 1 NC_015436.1 COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: tit:Thit_2120 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: uncharacterized protein; IMG reference gene:2503957520; PFAM: NAD dependent epimerase/dehydratase; Sorbitol phosphotransferase enzyme II N-terminus; NAD-dependent epimerase/dehydratase 1405678 10495531 Spico_1211 Sphaerochaeta coccoides DSM 17374 NAD-dependent epimerase/dehydratase YP_004411804.1 1404641 R 760011 CDS YP_004411805.1 330837164 10495532 1405965..1406543 1 NC_015436.1 KEGG: cbe:Cbei_3173 TetR family transcriptional regulator; SPTR: Transcriptional regulator, TetR family; IMG reference gene:2503957521; TetR family transcriptional regulator 1406543 10495532 Spico_1212 Sphaerochaeta coccoides DSM 17374 TetR family transcriptional regulator YP_004411805.1 1405965 D 760011 CDS YP_004411806.1 330837165 10495533 complement(1406571..1407557) 1 NC_015436.1 COGs: COG0095 Lipoate-protein ligase A; InterPro IPR004143:IPR019491:IPR004562; KEGG: cby:CLM_1876 lipoate-protein ligase A; PFAM: Biotin/lipoate A/B protein ligase; Lipoate protein ligase, C-terminal; SPTR: Lipoate--protein ligase; TIGRFAM: Lipoyltransferase/lipoate-protein ligase; IMG reference gene:2503957522; PFAM: Bacterial lipoate protein ligase C-terminus; Biotin/lipoate A/B protein ligase; TIGRFAM: lipoyltransferase and lipoate-protein ligase; lipoyltransferase and lipoate-protein ligase 1407557 10495533 Spico_1213 Sphaerochaeta coccoides DSM 17374 lipoyltransferase and lipoate-protein ligase YP_004411806.1 1406571 R 760011 CDS YP_004411807.1 330837166 10495534 complement(1407662..1409059) 1 NC_015436.1 COGs: COG1003 Glycine cleavage system protein P (pyridoxal-binding) C-terminal domain; InterPro IPR005814; KEGG: csh:Closa_1529 glycine dehydrogenase subunit 2; PFAM: Aminotransferase class-III; SPTR: uncharacterized protein; IMG reference gene:2503957523; PFAM: Glycine cleavage system P-protein; glycine dehydrogenase subunit beta 1409059 10495534 Spico_1214 Sphaerochaeta coccoides DSM 17374 glycine dehydrogenase subunit beta YP_004411807.1 1407662 R 760011 CDS YP_004411808.1 330837167 10495535 complement(1409059..1410378) 1 NC_015436.1 COGs: COG0403 Glycine cleavage system protein P (pyridoxal-binding) N-terminal domain; HAMAP: Glycine cleavage system P protein, subunit 1, InterPro IPR023010:IPR020580; KEGG: cpy:Cphy_1540 glycine dehydrogenase (decarboxylating); PFAM: Glycine cleavage system P-protein, N-terminal; PRIAM: Glycine dehydrogenase (decarboxylating); SPTR: uncharacterized protein; IMG reference gene:2503957524; PFAM: Glycine cleavage system P-protein; glycine dehydrogenase subunit alpha 1410378 10495535 Spico_1215 Sphaerochaeta coccoides DSM 17374 glycine dehydrogenase subunit alpha YP_004411808.1 1409059 R 760011 CDS YP_004411809.1 330837168 10495536 complement(1410378..1410755) 1 NC_015436.1 COGs: COG0509 Glycine cleavage system H protein (lipoate-binding); HAMAP: Glycine cleavage H-protein; InterPro IPR002930:IPR017453; KEGG: psa:PST_4063 glycine cleavage system protein H; PFAM: Glycine cleavage H-protein; SPTR: Glycine cleavage system H protein; TIGRFAM: Glycine cleavage H-protein, subgroup; IMG reference gene:2503957525; PFAM: Glycine cleavage H-protein; TIGRFAM: glycine cleavage system H protein; Glycine cleavage system H protein 1410755 10495536 Spico_1216 Sphaerochaeta coccoides DSM 17374 Glycine cleavage system H protein YP_004411809.1 1410378 R 760011 CDS YP_004411810.1 330837169 10495537 complement(1410834..1411919) 1 NC_015436.1 COGs: COG0404 Glycine cleavage system T protein (aminomethyltransferase); HAMAP: Aminomethyltransferase; InterPro IPR022903:IPR006222:IPR013977:IPR006223; KEGG: cpy:Cphy_1538 glycine cleavage system T protein; PFAM: Glycine cleavage T-protein, N-terminal; Glycine cleavage T-protein, C-terminal barrel; PRIAM: Aminomethyltransferase; SPTR: Aminomethyltransferase; TIGRFAM: Glycine cleavage system T protein; IMG reference gene:2503957526; PFAM: Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; TIGRFAM: glycine cleavage system T protein; glycine cleavage system protein T 1411919 10495537 Spico_1217 Sphaerochaeta coccoides DSM 17374 glycine cleavage system protein T YP_004411810.1 1410834 R 760011 CDS YP_004411811.1 330837170 10495538 complement(1412431..1412823) 1 NC_015436.1 InterPro IPR000086; KEGG: acl:ACL_1086 NTP pyrophosphohydrolase; PFAM: NUDIX hydrolase domain; SPTR: uncharacterized protein; IMG reference gene:2503957527; PFAM: NUDIX domain; TIGRFAM: mutator mutT protein; NUDIX hydrolase 1412823 10495538 Spico_1218 Sphaerochaeta coccoides DSM 17374 NUDIX hydrolase YP_004411811.1 1412431 R 760011 CDS YP_004411812.1 330837171 10495539 complement(1413183..1414118) 1 NC_015436.1 COGs: COG0679 permease; InterPro IPR004776; KEGG: ckr:CKR_1800 hypothetical protein; PFAM: Auxin efflux carrier; SPTR: uncharacterized protein; IMG reference gene:2503957528; PFAM: Membrane transport protein; auxin efflux carrier family protein 1414118 10495539 Spico_1219 Sphaerochaeta coccoides DSM 17374 auxin efflux carrier family protein YP_004411812.1 1413183 R 760011 CDS YP_004411813.1 330837172 10495540 complement(1414368..1415387) 1 NC_015436.1 COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family; InterPro IPR001155; KEGG: cbe:Cbei_0562 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; PRIAM: NADPH dehydrogenase; SPTR: NADH:flavin oxidoreductase/NADH oxidase; IMG reference gene:2503957529; PFAM: NADH:flavin oxidoreductase / NADH oxidase; NADPH dehydrogenase 1415387 10495540 Spico_1220 Sphaerochaeta coccoides DSM 17374 NADPH dehydrogenase YP_004411813.1 1414368 R 760011 CDS YP_004411814.1 330837173 10495541 1415485..1416366 1 NC_015436.1 COGs: COG0225 Peptide methionine sulfoxide reductase; HAMAP: Peptide methionine sulphoxide reductase MsrA; InterPro IPR002569:IPR002579; KEGG: cbc:CbuK_1170 bifunctional methionine sulfoxide reductase B/A protein; PFAM: Peptide methionine sulphoxide reductase MsrA; Methionine sulphoxide reductase B; SPTR: Methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase; TIGRFAM: Peptide methionine sulphoxide reductase MsrA; IMG reference gene:2503957530; PFAM: SelR domain; Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; methionine-R-sulfoxide reductase; peptide methionine sulfoxide reductase 1416366 10495541 Spico_1221 Sphaerochaeta coccoides DSM 17374 peptide methionine sulfoxide reductase YP_004411814.1 1415485 D 760011 CDS YP_004411815.1 330837174 10495542 1416653..1417474 1 NC_015436.1 COGs: COG0428 divalent heavy-metal cations transporter; InterPro IPR003689; KEGG: cce:Ccel_1427 zinc/iron permease; PFAM: Zinc/iron permease; SPTR: Zinc/iron permease; IMG reference gene:2503957531; PFAM: ZIP Zinc transporter; zinc/iron permease 1417474 10495542 Spico_1222 Sphaerochaeta coccoides DSM 17374 zinc/iron permease YP_004411815.1 1416653 D 760011 CDS YP_004411816.1 330837175 10495543 complement(1417581..1419179) 1 NC_015436.1 COGs: COG1295 membrane protein; InterPro IPR004664:IPR017039; KEGG: acd:AOLE_02310 tRNA-processing ribonuclease BN(RNase BN); PFAM: Ribonuclease BN-related; SPTR: Ribonuclease; TIGRFAM: Ribonuclease BN; IMG reference gene:2503957532; PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN); ribonuclease BN 1419179 10495543 Spico_1223 Sphaerochaeta coccoides DSM 17374 ribonuclease BN YP_004411816.1 1417581 R 760011 CDS YP_004411817.1 330837176 10495544 complement(1419186..1420115) 1 NC_015436.1 COGs: COG2267 Lysophospholipase; InterPro IPR000073; KEGG: amt:Amet_0462 alpha/beta hydrolase fold; PFAM: Alpha/beta hydrolase fold-1; SPTR: PLA depolymerase; IMG reference gene:2503957533; PFAM: lysophospholipase; alpha/beta hydrolase 1420115 10495544 Spico_1224 Sphaerochaeta coccoides DSM 17374 alpha/beta hydrolase YP_004411817.1 1419186 R 760011 CDS YP_004411818.1 330837177 10495545 1420273..1420809 1 NC_015436.1 COGs: COG0622 phosphoesterase; InterPro IPR004843; KEGG: mta:Moth_0919 phosphodiesterase; PFAM: Metallo-dependent phosphatase; SPTR: uncharacterized protein; IMG reference gene:2503957534; PFAM: Calcineurin-like phosphoesterase; TIGRFAM: phosphoesterase, MJ0936 family; metallophosphoesterase 1420809 10495545 Spico_1225 Sphaerochaeta coccoides DSM 17374 metallophosphoesterase YP_004411818.1 1420273 D 760011 CDS YP_004411819.1 330837178 10495546 1421123..1423531 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR011110:IPR000408; KEGG: mxa:MXAN_0889 RCC1 repeat-containing protein; PFAM: Listeria/Bacterioides repeat; Two component regulator propeller; Regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; IMG reference gene:2503957535; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; hypothetical protein 1423531 10495546 Spico_1226 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411819.1 1421123 D 760011 CDS YP_004411820.1 330837179 10495547 complement(1423602..1425542) 1 NC_015436.1 COGs: COG2414 Aldehyde:ferredoxin oxidoreductase; InterPro IPR013983:IPR001203; KEGG: dol:Dole_1771 aldehyde ferredoxin oxidoreductase; PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal; Aldehyde ferredoxin oxidoreductase, C-terminal; PRIAM: Aldehyde ferredoxin oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase, N-terminal; SPTR: Aldehyde ferredoxin oxidoreductase; IMG reference gene:2503957536; PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3; aldehyde ferredoxin oxidoreductase 1425542 10495547 Spico_1227 Sphaerochaeta coccoides DSM 17374 aldehyde ferredoxin oxidoreductase YP_004411820.1 1423602 R 760011 CDS YP_004411821.1 330837180 10495548 1425711..1427471 1 NC_015436.1 COGs: COG0572 Uridine kinase; InterPro IPR003593; KEGG: ssm:Spirs_3160 AAA ATPase; SMART: ATPase, AAA+ type, core; SPTR: Uridine kinase; IMG reference gene:2503957537; PFAM: Phosphoribulokinase / Uridine kinase; ATPase AAA 1427471 10495548 Spico_1228 Sphaerochaeta coccoides DSM 17374 ATPase AAA YP_004411821.1 1425711 D 760011 CDS YP_004411822.1 330837181 10495549 complement(1427534..1428673) 1 NC_015436.1 COGs: COG3177 conserved hypothetical protein; InterPro IPR003812; KEGG: gox:GOX2572 hypothetical protein; PFAM: Filamentation induced by cAMP/death on curing-related; SPTR: uncharacterized protein; IMG reference gene:2503957538; PFAM: Fic/DOC family; Fic family protein 1428673 10495549 Spico_1229 Sphaerochaeta coccoides DSM 17374 Fic family protein YP_004411822.1 1427534 R 760011 CDS YP_004411823.1 330837182 10495550 complement(1428868..1429239) 1 NC_015436.1 COGs: COG2983 conserved hypothetical protein; KEGG: ssm:Spirs_3171 protein of unknown function UPF0153; SPTR: cytoplasmic protein; manually curated; IMG reference gene:2503957539; hypothetical protein 1429239 10495550 Spico_1230 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411823.1 1428868 R 760011 CDS YP_004411824.1 330837183 10495551 complement(1429248..1430069) 1 NC_015436.1 COGs: COG0496 acid phosphatase; HAMAP: Survival protein SurE-like phosphatase/nucleotidase; InterPro IPR002828; KEGG: ssm:Spirs_3174 stationary-phase survival protein SurE; PFAM: Survival protein SurE-like phosphatase/nucleotidase; SPTR: 5'-nucleotidase surE; TIGRFAM: Survival protein SurE-like phosphatase/nucleotidase; IMG reference gene:2503957540; PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE; multifunctional protein surE 1430069 10495551 Spico_1231 Sphaerochaeta coccoides DSM 17374 multifunctional protein surE YP_004411824.1 1429248 R 760011 CDS YP_004411825.1 330837184 10495552 complement(1430066..1431235) 1 NC_015436.1 COGs: COG0153 Galactokinase; KEGG: ssm:Spirs_3175 galactokinase; PRIAM: Galactokinase; SPTR: uncharacterized protein; IMG reference gene:2503957541; PFAM: Galactokinase galactose-binding signature; galactokinase 1431235 10495552 Spico_1232 Sphaerochaeta coccoides DSM 17374 galactokinase YP_004411825.1 1430066 R 760011 CDS YP_004411826.1 330837185 10495553 complement(1431373..1431576) 1 NC_015436.1 COGs: COG0254 Ribosomal protein L31; HAMAP: Ribosomal protein L31; InterPro IPR002150; KEGG: ssm:Spirs_3178 ribosomal protein L31; PFAM: Ribosomal protein L31; SPTR: 50S ribosomal protein L31; TIGRFAM: Ribosomal protein L31; IMG reference gene:2503957542; PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31; 50S ribosomal protein L31 1431576 10495553 Spico_1233 Sphaerochaeta coccoides DSM 17374 50S ribosomal protein L31 YP_004411826.1 1431373 R 760011 CDS YP_004411827.1 330837186 10495554 complement(1431664..1433793) 1 NC_015436.1 COGs: COG1158 Transcription termination factor; InterProIPR011112:IPR011129:IPR003593:IPR004665:IPR 011113:IPR000194; KEGG: ssm:Spirs_3179 transcription termination factor Rho; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; Rho termination factor, RNA-binding; SMART: Cold shock protein; Rho termination factor, N-terminal; ATPase, AAA+ type, core; SPTR: Transcription termination factor Rho; TIGRFAM: Transcription termination factor Rho; IMG reference gene:2503957543; PFAM: Rho termination factor, N-terminal domain; Rho termination factor, RNA-binding domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: transcription termination factor Rho; transcription termination factor Rho 1433793 10495554 Spico_1234 Sphaerochaeta coccoides DSM 17374 transcription termination factor Rho YP_004411827.1 1431664 R 760011 CDS YP_004411828.1 330837187 10495555 complement(1433995..1435284) 1 NC_015436.1 COGs: COG1546 Uncharacterized protein (competence- and mitomycin-induced); InterPro IPR001453:IPR008136; KEGG: ssm:Spirs_3180 competence/damage-inducible protein CinA; PFAM: CinA, C-terminal; Molybdopterin binding; SMART: Molybdopterin binding; SPTR: CinA-like protein; TIGRFAM: CinA, C-terminal; IMG reference gene:2503957544; PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-terminal domain; molybdenum cofactor synthesis domain; CinA domain-containing protein 1435284 10495555 Spico_1235 Sphaerochaeta coccoides DSM 17374 CinA domain-containing protein YP_004411828.1 1433995 R 760011 CDS YP_004411829.1 330837188 10495556 complement(1435286..1437025) 1 NC_015436.1 COGs: COG0815 Apolipoprotein N-acyltransferase; HAMAP: Apolipoprotein N-acyltransferase; InterPro IPR004563:IPR003010; KEGG: ssm:Spirs_3184 apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: uncharacterized protein; TIGRFAM: Apolipoprotein N-acyltransferase; IMG reference gene:2503957545; PFAM: Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase 1437025 10495556 Spico_1236 Sphaerochaeta coccoides DSM 17374 apolipoprotein N-acyltransferase YP_004411829.1 1435286 R 760011 CDS YP_004411830.1 330837189 10495557 complement(1437064..1437378) 1 NC_015436.1 COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119; KEGG: ssm:Spirs_3185 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein; SPTR: DNA-binding protein HbbU; IMG reference gene:2503957546; PFAM: Bacterial DNA-binding protein; histone family protein DNA-binding protein 1437378 10495557 Spico_1237 Sphaerochaeta coccoides DSM 17374 histone family protein DNA-binding protein YP_004411830.1 1437064 R 760011 CDS YP_004411831.1 330837190 10495558 complement(1437683..1437958) 1 NC_015436.1 HAMAP: Ribosomal protein S20; InterPro IPR002583; KEGG: sta:STHERM_c18580 30S ribosomal protein S20; PFAM: Ribosomal protein S20; SPTR: 30S ribosomal protein S20; TIGRFAM: Ribosomal protein S20; IMG reference gene:2503957547; PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20; 30S ribosomal protein S20 1437958 10495558 Spico_1238 Sphaerochaeta coccoides DSM 17374 30S ribosomal protein S20 YP_004411831.1 1437683 R 760011 CDS YP_004411832.1 330837191 10495559 complement(1438114..1439346) 1 NC_015436.1 COGs: COG1774 Uncharacterized homolog of PSP1; InterPro IPR007557; KEGG: sta:STHERM_c18600 hypothetical protein; PFAM: PSP1, C-terminal; SPTR: uncharacterized protein; IMG reference gene:2503957548; PFAM: PSP1 C-terminal conserved region; PSP1 domain-containing protein 1439346 10495559 Spico_1239 Sphaerochaeta coccoides DSM 17374 PSP1 domain-containing protein YP_004411832.1 1438114 R 760011 CDS YP_004411833.1 330837192 10495560 complement(1439527..1440720) 1 NC_015436.1 COGs: COG0738 Fucose permease; InterPro IPR011701; KEGG: csh:Closa_1055 major facilitator superfamily MFS_1; PFAM: Major facilitator superfamily MFS-1; SPTR: uncharacterized protein; IMG reference gene:2503957549; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein 1440720 10495560 Spico_1240 Sphaerochaeta coccoides DSM 17374 major facilitator superfamily protein YP_004411833.1 1439527 R 760011 CDS YP_004411834.1 330837193 10495562 1441771..1442550 1 NC_015436.1 COGs: COG0084 Mg-dependent DNase; InterPro IPR015991:IPR001130; KEGG: ssm:Spirs_3191 hydrolase, TatD family; PFAM: Deoxyribonuclease, TatD-related; SPTR: uncharacterized protein; TIGRFAM: Deoxyribonuclease, TatD Mg-dependent, prokaryote; IMG reference gene:2503957551; PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family; TatD family hydrolase 1442550 10495562 Spico_1242 Sphaerochaeta coccoides DSM 17374 TatD family hydrolase YP_004411834.1 1441771 D 760011 CDS YP_004411835.1 330837194 10495563 1442581..1443612 1 NC_015436.1 COGs: COG0042 tRNA-dihydrouridine synthase; InterPro IPR004652:IPR001269; KEGG: ssm:Spirs_3192 TIM-barrel protein, nifR3 family; PFAM: tRNA-dihydrouridine synthase; SPTR: tRNA-dihydrouridine synthase B; TIGRFAM: tRNA-dihydrouridine synthase, TIM-barrel, NifR3; IMG reference gene:2503957552; PFAM: Dihydrouridine synthase (Dus); TIGRFAM: TIM-barrel protein, nifR3 family; nitrogen regulator protein NIfR3 1443612 10495563 Spico_1243 Sphaerochaeta coccoides DSM 17374 nitrogen regulator protein NIfR3 YP_004411835.1 1442581 D 760011 CDS YP_004411836.1 330837195 10495564 1443605..1443748 1 NC_015436.1 KEGG: pmy:Pmen_3843 alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase fold; IMG reference gene:2503957553; hypothetical protein 1443748 10495564 Spico_1244 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411836.1 1443605 D 760011 CDS YP_004411837.1 330837196 10495565 1443830..1445098 1 NC_015436.1 COGs: COG0151 Phosphoribosylamine-glycine ligase; InterPro IPR000115:IPR020562:IPR020561:IPR020560; KEGG: ssm:Spirs_3193 phosphoribosylamine/glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C-domain; PRIAM: Phosphoribosylamine--glycine ligase; SPTR: Phosphoribosylamine--glycine ligase; TIGRFAM: Phosphoribosylglycinamide synthetase; IMG reference gene:2503957554; PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase; phosphoribosylamine--glycine ligase 1445098 10495565 Spico_1245 Sphaerochaeta coccoides DSM 17374 phosphoribosylamine--glycine ligase YP_004411837.1 1443830 D 760011 CDS YP_004411838.1 330837197 10495566 1445320..1447761 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR011110:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Listeria/Bacterioides repeat; Two component regulator propeller; Regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; IMG reference gene:2503957555; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; hypothetical protein 1447761 10495566 Spico_1246 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411838.1 1445320 D 760011 CDS YP_004411839.1 330837198 10495567 complement(1447997..1448986) 1 NC_015436.1 COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR023210; KEGG: gym:GYMC10_1614 aldo/keto reductase; PFAM: NADP-dependent oxidoreductase domain; SPTR: Aldo/keto reductase; IMG reference gene:2503957556; PFAM: Aldo/keto reductase; NADP-dependent oxidoreductase domain-containing protein 1448986 10495567 Spico_1247 Sphaerochaeta coccoides DSM 17374 NADP-dependent oxidoreductase domain-containing protein YP_004411839.1 1447997 R 760011 CDS YP_004411840.1 330837199 10495568 complement(1449087..1450826) 1 NC_015436.1 KEGG: ssm:Spirs_4225 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957557; hypothetical protein 1450826 10495568 Spico_1248 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411840.1 1449087 R 760011 CDS YP_004411841.1 330837200 10495569 complement(1450879..1451661) 1 NC_015436.1 COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: ccb:Clocel_3670 undecaprenyl-phosphate glucose phosphotransferase; PFAM: Bacterial sugar transferase; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; SPTR: uncharacterized protein; IMG reference gene:2503957558; PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; UDP-phosphate galactose phosphotransferase 1451661 10495569 Spico_1249 Sphaerochaeta coccoides DSM 17374 UDP-phosphate galactose phosphotransferase YP_004411841.1 1450879 R 760011 CDS YP_004411842.1 330837201 10495570 complement(1451854..1452798) 1 NC_015436.1 KEGG: xca:xccb100_1061 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957559; hypothetical protein 1452798 10495570 Spico_1250 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411842.1 1451854 R 760011 CDS YP_004411843.1 330837202 10495571 1453538..1455679 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR011110:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; Two component regulator propeller; SPTR: Alpha-tubulin suppressor and related RCC1 domain-containing protein-like protein; IMG reference gene:2503957560; PFAM: Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 1455679 10495571 Spico_1251 Sphaerochaeta coccoides DSM 17374 chromosome condensation regulator RCC1 YP_004411843.1 1453538 D 760011 CDS YP_004411844.1 330837203 10495572 complement(1455803..1457308) 1 NC_015436.1 InterPro IPR011435; KEGG: csh:Closa_3302 protein of unknown function DUF1538; PFAM: Protein of unknown function DUF1538; SPTR: uncharacterized protein; IMG reference gene:2503957561; PFAM: Protein of unknown function (DUF1538); hypothetical protein 1457308 10495572 Spico_1252 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411844.1 1455803 R 760011 CDS YP_004411845.1 330837204 10495574 complement(1457638..1458657) 1 NC_015436.1 COGs: COG1088 dTDP-D-glucose 4 6-dehydratase; InterPro IPR005888:IPR001509; KEGG: cbe:Cbei_4754 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: dTDP-glucose 4,6-dehydratase; SPTR: dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; IMG reference gene:2503957563; PFAM: NAD dependent epimerase/dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 1458657 10495574 Spico_1254 Sphaerochaeta coccoides DSM 17374 dTDP-glucose 4,6-dehydratase YP_004411845.1 1457638 R 760011 CDS YP_004411846.1 330837205 10495575 complement(1458843..1459727) 1 NC_015436.1 COGs: COG0524 Sugar kinase ribokinase; InterPro IPR011611; KEGG: ssm:Spirs_1177 PfkB domain protein; PFAM: Carbohydrate/purine kinase; PRIAM: Ribokinase; SPTR: uncharacterized protein; IMG reference gene:2503957564; PFAM: pfkB family carbohydrate kinase; TIGRFAM: ribokinase; Ribokinase 1459727 10495575 Spico_1255 Sphaerochaeta coccoides DSM 17374 Ribokinase YP_004411846.1 1458843 R 760011 CDS YP_004411847.1 330837206 10495576 complement(1459915..1460970) 1 NC_015436.1 COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: dsh:Dshi_0528 ribose/xylose/arabinose/galactoside ABC-type transport system protein; PFAM: ABC transporter permease; SPTR: Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components; IMG reference gene:2503957565; PFAM: Branched-chain amino acid transport system / permease component; inner-membrane translocator 1460970 10495576 Spico_1256 Sphaerochaeta coccoides DSM 17374 inner-membrane translocator YP_004411847.1 1459915 R 760011 CDS YP_004411848.1 330837207 10495577 complement(1460967..1462004) 1 NC_015436.1 COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: dsh:Dshi_0529 ribose/xylose/arabinose/galactoside ABC-type transport system protein; PFAM: ABC transporter permease; SPTR: uncharacterized protein; IMG reference gene:2503957566; PFAM: Branched-chain amino acid transport system / permease component; monosaccharide ABC transporter membrane protein, CUT2 family 1462004 10495577 Spico_1257 Sphaerochaeta coccoides DSM 17374 monosaccharide ABC transporter membrane protein, CUT2 family YP_004411848.1 1460967 R 760011 CDS YP_004411849.1 330837208 10495578 complement(1462021..1463508) 1 NC_015436.1 COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: azl:AZL_b05830 simple sugar transport system ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-); IMG reference gene:2503957567; PFAM: ABC transporter; monosaccharide ABC transporter ATP-binding protein, CUT2 family 1463508 10495578 Spico_1258 Sphaerochaeta coccoides DSM 17374 monosaccharide ABC transporter ATP-binding protein, CUT2 family YP_004411849.1 1462021 R 760011 CDS YP_004411850.1 330837209 10495579 complement(1463601..1464605) 1 NC_015436.1 COGs: COG1879 ABC-type sugar transport system periplasmic component; KEGG: dsh:Dshi_0531 ribose/xylose/arabinose/galactoside ABC-type transport system protein; SPTR: uncharacterized protein; IMG reference gene:2503957568; PFAM: family; monosaccharide ABC transporter substrate-binding protein, CUT2 family 1464605 10495579 Spico_1259 Sphaerochaeta coccoides DSM 17374 monosaccharide ABC transporter substrate-binding protein, CUT2 family YP_004411850.1 1463601 R 760011 CDS YP_004411851.1 330837210 10495580 1464819..1465871 1 NC_015436.1 COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: dap:Dacet_0215 transcriptional regulator, LacI family; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI; SPTR: Transcriptional regulator, LacI family; IMG reference gene:2503957569; PFAM: Bacterial regulatory proteins, lacI family; family; LacI family transcriptional regulator 1465871 10495580 Spico_1260 Sphaerochaeta coccoides DSM 17374 LacI family transcriptional regulator YP_004411851.1 1464819 D 760011 CDS YP_004411852.1 330837211 10495581 1465868..1466845 1 NC_015436.1 COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: pwa:Pecwa_2644 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel; IMG reference gene:2503957570; PFAM: Xylose isomerase-like TIM barrel; xylose isomerase domain-containing protein 1466845 10495581 Spico_1261 Sphaerochaeta coccoides DSM 17374 xylose isomerase domain-containing protein YP_004411852.1 1465868 D 760011 CDS YP_004411853.1 330837212 10495582 complement(1466887..1469937) 1 NC_015436.1 InterPro IPR011493; KEGG: swo:Swol_1078 Ig-like domain-containing protein; SPTR: Surface proteins containing Ig-like domains-like; IMG reference gene:2503957571; PFAM: The GLUG motif; hypothetical protein 1469937 10495582 Spico_1262 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411853.1 1466887 R 760011 CDS YP_004411854.1 330837213 10495583 complement(1469981..1470937) 1 NC_015436.1 KEGG: bfr:BF3846 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957572; hypothetical protein 1470937 10495583 Spico_1263 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411854.1 1469981 R 760011 CDS YP_004411855.1 330837214 10495584 1471137..1472813 1 NC_015436.1 KEGG: bfs:BF1484 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957573; hypothetical protein 1472813 10495584 Spico_1264 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411855.1 1471137 D 760011 CDS YP_004411856.1 330837215 10495585 1472813..1473289 1 NC_015436.1 KEGG: mpi:Mpet_0889 extracellular solute-binding protein family 5; SPTR: uncharacterized protein; IMG reference gene:2503957574; hypothetical protein 1473289 10495585 Spico_1265 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411856.1 1472813 D 760011 CDS YP_004411857.1 330837216 10495586 1473286..1474248 1 NC_015436.1 COGs: COG4571 Outer membrane protease; KEGG: tde:TDE2032 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957575; PFAM: Omptin family; hypothetical protein 1474248 10495586 Spico_1266 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411857.1 1473286 D 760011 CDS YP_004411858.1 330837217 10495587 complement(1474287..1476596) 1 NC_015436.1 KEGG: spw:SPCG_1762 subtilisin-like serine protease; SPTR: uncharacterized protein; IMG reference gene:2503957576; PFAM: Subtilase; subtilisin-like serine protease 1476596 10495587 Spico_1267 Sphaerochaeta coccoides DSM 17374 subtilisin-like serine protease YP_004411858.1 1474287 R 760011 CDS YP_004411859.1 330837218 10495588 complement(1476593..1477636) 1 NC_015436.1 COGs: COG0464 ATPase of the AAA+ class; InterPro IPR003593:IPR003959; KEGG: mmy:MSC_1062 AAA ATPase; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; SPTR: AAA ATPase; IMG reference gene:2503957577; PFAM: ATPase associated with various cellular activities (AAA); ATPase AAA 1477636 10495588 Spico_1268 Sphaerochaeta coccoides DSM 17374 ATPase AAA YP_004411859.1 1476593 R 760011 CDS YP_004411860.1 330837219 10495589 1477850..1478428 1 NC_015436.1 COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005269; KEGG: gsu:GSU2766 decarboxylase; PFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; SPTR: Decarboxylase; TIGRFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; IMG reference gene:2503957578; PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein; TIGR00730 family protein; hypothetical protein 1478428 10495589 Spico_1269 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411860.1 1477850 D 760011 CDS YP_004411861.1 330837220 10495590 complement(1478531..1479448) 1 NC_015436.1 KEGG: tde:TDE0603 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957579; hypothetical protein 1479448 10495590 Spico_1270 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411861.1 1478531 R 760011 CDS YP_004411862.1 330837221 10495593 complement(1479975..1481738) 1 NC_015436.1 COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR001140:IPR003439; KEGG: cpy:Cphy_3379 ABC transporter transmembrane region; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter transmembrane protein; IMG reference gene:2503957582; PFAM: ABC transporter transmembrane region; ABC transporter; xenobiotic-transporting ATPase 1481738 10495593 Spico_1272 Sphaerochaeta coccoides DSM 17374 xenobiotic-transporting ATPase YP_004411862.1 1479975 R 760011 CDS YP_004411863.1 330837222 10495594 complement(1481722..1483533) 1 NC_015436.1 COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR001140:IPR003439; KEGG: cpy:Cphy_3380 ABC transporter transmembrane region; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter transmembrane protein; IMG reference gene:2503957583; PFAM: ABC transporter transmembrane region; ABC transporter; xenobiotic-transporting ATPase 1483533 10495594 Spico_1273 Sphaerochaeta coccoides DSM 17374 xenobiotic-transporting ATPase YP_004411863.1 1481722 R 760011 CDS YP_004411864.1 330837223 10495595 complement(1483530..1483994) 1 NC_015436.1 COGs: COG1846 Transcriptional regulators; InterPro IPR000835; KEGG: cdl:CDR20291_3067 MarR-family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Predicted protein; IMG reference gene:2503957584; PFAM: MarR family; MarR family transcriptional regulator 1483994 10495595 Spico_1274 Sphaerochaeta coccoides DSM 17374 MarR family transcriptional regulator YP_004411864.1 1483530 R 760011 CDS YP_004411865.1 330837224 10495596 complement(1484273..1484911) 1 NC_015436.1 COGs: COG0698 Ribose 5-phosphate isomerase RpiB; InterPro IPR003500; KEGG: cpy:Cphy_0491 hypothetical protein; PFAM: Ribose/galactose isomerase; SPTR: uncharacterized protein; IMG reference gene:2503957585; PFAM: Ribose-5-phosphate isomerase; Ribose/Galactose Isomerase; Ribose/galactose isomerase 1484911 10495596 Spico_1275 Sphaerochaeta coccoides DSM 17374 Ribose/galactose isomerase YP_004411865.1 1484273 R 760011 CDS YP_004411866.1 330837225 10495597 1485137..1486924 1 NC_015436.1 KEGG: tde:TDE1234 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957586; hypothetical protein 1486924 10495597 Spico_1276 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411866.1 1485137 D 760011 CDS YP_004411867.1 330837226 10495598 complement(1486928..1487938) 1 NC_015436.1 COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR018060:IPR000005; KEGG: bpb:bpr_III019 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: uncharacterized protein; IMG reference gene:2503957587; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator 1487938 10495598 Spico_1277 Sphaerochaeta coccoides DSM 17374 AraC family transcriptional regulator YP_004411867.1 1486928 R 760011 CDS YP_004411868.1 330837227 10495599 1488078..1490597 1 NC_015436.1 KEGG: str:Sterm_4037 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957588; hypothetical protein 1490597 10495599 Spico_1278 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411868.1 1488078 D 760011 CDS YP_004411869.1 330837228 10495600 1490757..1492028 1 NC_015436.1 COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: str:Sterm_4038 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: uncharacterized protein; IMG reference gene:2503957589; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein 1492028 10495600 Spico_1279 Sphaerochaeta coccoides DSM 17374 ABC transporter substrate-binding protein YP_004411869.1 1490757 D 760011 CDS YP_004411870.1 330837229 10495601 1492121..1493002 1 NC_015436.1 COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: scb:SCAB_8181 integral membrane binding-protein-dependent transport protein; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: uncharacterized protein; IMG reference gene:2503957590; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 1493002 10495601 Spico_1280 Sphaerochaeta coccoides DSM 17374 binding-protein-dependent transport system inner membrane protein YP_004411870.1 1492121 D 760011 CDS YP_004411871.1 330837230 10495602 1493004..1493855 1 NC_015436.1 COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: str:Sterm_4035 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: uncharacterized protein; IMG reference gene:2503957591; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 1493855 10495602 Spico_1281 Sphaerochaeta coccoides DSM 17374 binding-protein-dependent transport system inner membrane protein YP_004411871.1 1493004 D 760011 CDS YP_004411872.1 330837231 10495603 1493916..1497113 1 NC_015436.1 COGs: COG0383 Alpha-mannosidase; InterPro IPR015341:IPR000602:IPR011682; KEGG: tit:Thit_1713 glycosyl hydrolase 38 domain protein; PFAM: Glycoside hydrolase, family 38, core; Glycoside hydrolase, family 38, central domain; Glycosyl hydrolases 38, C-terminal; PRIAM: Alpha-mannosidase; SMART: Glycoside hydrolase, family 38, central domain; SPTR: Glycosyl hydrolase 38 domain protein; IMG reference gene:2503957592; PFAM: Glycosyl hydrolases family 38 C-terminal domain; Glycosyl hydrolases family 38 N-terminal domain; Alpha mannosidase, middle domain; alpha-mannosidase 1497113 10495603 Spico_1282 Sphaerochaeta coccoides DSM 17374 alpha-mannosidase YP_004411872.1 1493916 D 760011 CDS YP_004411873.1 330837232 10495604 1497110..1498210 1 NC_015436.1 COGs: COG4225 unsaturated glucuronyl hydrolase involved in regulation of surface properties and related protein; InterPro IPR010905; KEGG: bpb:bpr_III020 unsaturated rhamnogalacturonyl hydrolase Gh105C; PFAM: Glycosyl hydrolase, family 88; SPTR: uncharacterized protein; IMG reference gene:2503957593; PFAM: Glycosyl Hydrolase 88; glycosyl hydrolase 88 1498210 10495604 Spico_1283 Sphaerochaeta coccoides DSM 17374 glycosyl hydrolase 88 YP_004411873.1 1497110 D 760011 CDS YP_004411874.1 330837233 10495605 1498707..1501145 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR011110:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Listeria/Bacterioides repeat; Two component regulator propeller; Regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; IMG reference gene:2503957594; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; hypothetical protein 1501145 10495605 Spico_1284 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411874.1 1498707 D 760011 CDS YP_004411875.1 330837234 10495606 1501395..1501802 1 NC_015436.1 COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310; KEGG: ddf:DEFDS_1906 histidine triad family protein; PFAM: Histidine triad (HIT) protein; SPTR: Histidine triad family protein; IMG reference gene:2503957595; PFAM: HIT domain; histidine triad (HIT) protein 1501802 10495606 Spico_1285 Sphaerochaeta coccoides DSM 17374 histidine triad (HIT) protein YP_004411875.1 1501395 D 760011 CDS YP_004411876.1 330837235 10495607 1501886..1502362 1 NC_015436.1 COGs: COG1225 Peroxiredoxin; InterPro IPR000866; KEGG: hha:Hhal_0101 redoxin domain-containing protein; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; SPTR: Redoxin domain protein; IMG reference gene:2503957596; PFAM: AhpC/TSA family; alkyl hydroperoxide reductase 1502362 10495607 Spico_1286 Sphaerochaeta coccoides DSM 17374 alkyl hydroperoxide reductase YP_004411876.1 1501886 D 760011 CDS YP_004411877.1 330837236 10495608 1502359..1503471 1 NC_015436.1 KEGG: sru:SRU_2861 endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase; IMG reference gene:2503957597; hypothetical protein 1503471 10495608 Spico_1287 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411877.1 1502359 D 760011 CDS YP_004411878.1 330837237 10495609 complement(1503501..1505201) 1 NC_015436.1 COGs: COG0072 Phenylalanyl-tRNA synthetase beta subunit; InterPro IPR005146:IPR005147:IPR004531; KEGG: ssm:Spirs_4135 phenylalanyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase, B5; PRIAM: Phenylalanine--tRNA ligase; SMART: tRNA synthetase, B5; B3/B4 tRNA-binding domain; SPTR: Phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, archae/euk cytosolic; IMG reference gene:2503957598; PFAM: tRNA synthetase B5 domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; phenylalanyl-tRNA synthetase subunit beta 1505201 10495609 Spico_1288 Sphaerochaeta coccoides DSM 17374 phenylalanyl-tRNA synthetase subunit beta YP_004411878.1 1503501 R 760011 CDS YP_004411879.1 330837238 10495610 complement(1505201..1506745) 1 NC_015436.1 COGs: COG0016 Phenylalanyl-tRNA synthetase alpha subunit; HAMAP: Phenylalanyl-tRNA synthetase alpha chain 2, bacterial/archaeal; InterPro IPR004529:IPR002319:IPR022917; KEGG: ssm:Spirs_4136 phenylalanyl-tRNA synthetase, alpha subunit; PFAM: Phenylalanyl-tRNA synthetase; SPTR: Phenylalanyl-tRNA synthetase, alpha subunit; TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit; IMG reference gene:2503957599; PFAM: tRNA synthetases class II core domain (F); TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; phenylalanyl-tRNA synthetase subunit alpha 1506745 10495610 Spico_1289 Sphaerochaeta coccoides DSM 17374 phenylalanyl-tRNA synthetase subunit alpha YP_004411879.1 1505201 R 760011 CDS YP_004411880.1 330837239 10495611 complement(1506901..1507425) 1 NC_015436.1 KEGG: ckr:CKR_2225 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957600; hypothetical protein 1507425 10495611 Spico_1290 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411880.1 1506901 R 760011 CDS YP_004411881.1 330837240 10495612 complement(1507428..1508399) 1 NC_015436.1 COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: bhy:BHWA1_00926 oxidoreductase domain containing protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; PRIAM: Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase; SPTR: uncharacterized protein; IMG reference gene:2503957601; PFAM: Oxidoreductase, NAD-binding Rossmann fold; Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase 1508399 10495612 Spico_1291 Sphaerochaeta coccoides DSM 17374 Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase YP_004411881.1 1507428 R 760011 CDS YP_004411882.1 330837241 10495613 complement(1508475..1510508) 1 NC_015436.1 COGs: COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit; InterPro IPR005475:IPR001017:IPR005476; KEGG: jan:Jann_3081 dehydrogenase, E1 component; PFAM: Dehydrogenase, E1 component; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; PRIAM: Pyruvate dehydrogenase (acetyl-transferring); SMART: Transketolase-like, pyrimidine-binding domain; SPTR: Dehydrogenase E1 component; IMG reference gene:2503957602; PFAM: Dehydrogenase E1 component; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; pyruvate dehydrogenase 1510508 10495613 Spico_1292 Sphaerochaeta coccoides DSM 17374 pyruvate dehydrogenase YP_004411882.1 1508475 R 760011 CDS YP_004411883.1 330837242 10495614 complement(1510604..1511191) 1 NC_015436.1 KEGG: sta:STHERM_c16640 flavoredoxin; SPTR: uncharacterized protein; IMG reference gene:2503957603; flavoredoxin 1511191 10495614 Spico_1293 Sphaerochaeta coccoides DSM 17374 flavoredoxin YP_004411883.1 1510604 R 760011 CDS YP_004411884.1 330837243 10495615 1511375..1512055 1 NC_015436.1 COGs: COG0634 Hypoxanthine-guanine phosphoribosyltransferase; InterPro IPR005904:IPR000836; KEGG: dae:Dtox_0723 hypoxanthine phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; PRIAM: Hypoxanthine phosphoribosyltransferase; SPTR: uncharacterized protein; TIGRFAM: Hypoxanthine phosphoribosyl transferase; IMG reference gene:2503957604; PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 1512055 10495615 Spico_1294 Sphaerochaeta coccoides DSM 17374 hypoxanthine phosphoribosyltransferase YP_004411884.1 1511375 D 760011 CDS YP_004411885.1 330837244 10495616 1512099..1512674 1 NC_015436.1 COGs: COG2236 phosphoribosyltransferase; InterPro IPR000836; KEGG: sta:STHERM_c19080 hypothetical protein; PFAM: Phosphoribosyltransferase; SPTR: uncharacterized protein; IMG reference gene:2503957605; PFAM: Phosphoribosyl transferase domain; phosphoribosyltransferase 1512674 10495616 Spico_1295 Sphaerochaeta coccoides DSM 17374 phosphoribosyltransferase YP_004411885.1 1512099 D 760011 CDS YP_004411886.1 330837245 10495617 1512671..1513939 1 NC_015436.1 COGs: COG0104 Adenylosuccinate synthase; HAMAP: Adenylosuccinate synthetase; InterPro IPR001114; KEGG: dly:Dehly_0529 adenylosuccinate synthetase; PFAM: Adenylosuccinate synthetase; PRIAM: Adenylosuccinate synthase; SMART: Adenylosuccinate synthetase; SPTR: Adenylosuccinate synthetase; TIGRFAM: Adenylosuccinate synthetase; IMG reference gene:2503957606; PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase; adenylosuccinate synthetase 1513939 10495617 Spico_1296 Sphaerochaeta coccoides DSM 17374 adenylosuccinate synthetase YP_004411886.1 1512671 D 760011 CDS YP_004411887.1 330837246 10495618 1514265..1515356 1 NC_015436.1 COGs: COG0687 Spermidine/putrescine-binding periplasmic protein; InterPro IPR006059; KEGG: tpp:TPASS_0655 spermidine/putrescine ABC transporter, periplasmic binding protein; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Spermidine/putrescine ABC transporter, periplasmic binding protein; IMG reference gene:2503957607; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein 1515356 10495618 Spico_1297 Sphaerochaeta coccoides DSM 17374 ABC transporter substrate-binding protein YP_004411887.1 1514265 D 760011 CDS YP_004411888.1 330837247 10495619 1515635..1518001 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR000408; KEGG: mxa:MXAN_0889 RCC1 repeat-containing protein; PFAM: Regulator of chromosome condensation, RCC1; Listeria/Bacterioides repeat; SPTR: Alpha-tubulin suppressor and related RCC1 domain-containing protein-like protein; IMG reference gene:2503957608; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 1518001 10495619 Spico_1298 Sphaerochaeta coccoides DSM 17374 chromosome condensation regulator RCC1 YP_004411888.1 1515635 D 760011 CDS YP_004411889.1 330837248 10495620 1518187..1519587 1 NC_015436.1 COGs: COG0015 Adenylosuccinate lyase; InterPro IPR004769:IPR022761:IPR019468; KEGG: cpy:Cphy_3043 adenylosuccinate lyase; PFAM: Lyase 1, N-terminal; Adenylosuccinate lyase C-terminal metazoa/fungi; SPTR: uncharacterized protein; TIGRFAM: Adenylosuccinate lyase; IMG reference gene:2503957609; PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase; adenylosuccinate lyase 1519587 10495620 Spico_1299 Sphaerochaeta coccoides DSM 17374 adenylosuccinate lyase YP_004411889.1 1518187 D 760011 CDS YP_004411890.1 330837249 10495621 complement(1519653..1520348) 1 NC_015436.1 InterPro IPR015414; KEGG: neu:NE1198 hypothetical protein; PFAM: SNARE associated Golgi protein; SPTR: uncharacterized protein; IMG reference gene:2503957610; PFAM: SNARE associated Golgi protein; hypothetical protein 1520348 10495621 Spico_1300 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411890.1 1519653 R 760011 CDS YP_004411891.1 330837250 10495622 complement(1520352..1521626) 1 NC_015436.1 COGs: COG2872 metal-dependent hydrolase related to alanyl-tRNA synthetase HxxxH domain; InterPro IPR012947:IPR018164; KEGG: ssm:Spirs_0879 alanyl-tRNA synthetase, class IIc; PFAM: Alanyl-tRNA synthetase, class IIc, N-terminal; Threonyl/alanyl tRNA synthetase, SAD; SMART: Threonyl/alanyl tRNA synthetase, SAD; SPTR: Threonyl/alanyl tRNA synthetase SAD; IMG reference gene:2503957611; PFAM: Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); alanyl-tRNA synthetase 1521626 10495622 Spico_1301 Sphaerochaeta coccoides DSM 17374 alanyl-tRNA synthetase YP_004411891.1 1520352 R 760011 CDS YP_004411892.1 330837251 10495623 1521821..1522414 1 NC_015436.1 KEGG: ssm:Spirs_0875 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957612; hypothetical protein 1522414 10495623 Spico_1302 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411892.1 1521821 D 760011 CDS YP_004411893.1 330837252 10495624 complement(1522454..1523143) 1 NC_015436.1 KEGG: dac:Daci_0587 cytochrome c biogenesis protein transmembrane region; SPTR: Cytochrome c biogenesis protein transmembrane region; IMG reference gene:2503957613; hypothetical protein 1523143 10495624 Spico_1303 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411893.1 1522454 R 760011 CDS YP_004411894.1 330837253 10495626 complement(1523336..1523890) 1 NC_015436.1 KEGG: gpb:HDN1F_10950 hypothetical protein; SPTR: Diheme Cytochrome c-type; IMG reference gene:2503957615; hypothetical protein 1523890 10495626 Spico_1304 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411894.1 1523336 R 760011 CDS YP_004411895.1 330837254 10495627 complement(1523967..1525217) 1 NC_015436.1 KEGG: osa:4345910 hypothetical protein; SPTR: Whole genome shotgun sequence assembly, scaffold_63; IMG reference gene:2503957616; hypothetical protein 1525217 10495627 Spico_1305 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411895.1 1523967 R 760011 CDS YP_004411896.1 330837255 10495628 complement(1525279..1526055) 1 NC_015436.1 COGs: COG2968 conserved hypothetical protein; InterPro IPR007497; KEGG: nha:Nham_3577 hypothetical protein; PFAM: Protein of unknown function DUF541; SPTR: uncharacterized protein; IMG reference gene:2503957617; PFAM: Protein of unknown function (DUF541); hypothetical protein 1526055 10495628 Spico_1306 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411896.1 1525279 R 760011 CDS YP_004411897.1 330837256 10495629 complement(1526105..1526719) 1 NC_015436.1 InterPro IPR000086; KEGG: ssm:Spirs_0637 NUDIX hydrolase; PFAM: NUDIX hydrolase domain; SPTR: MutT/nudix family protein; IMG reference gene:2503957618; PFAM: NUDIX domain; NUDIX hydrolase 1526719 10495629 Spico_1307 Sphaerochaeta coccoides DSM 17374 NUDIX hydrolase YP_004411897.1 1526105 R 760011 CDS YP_004411898.1 330837257 10495630 complement(1526703..1527635) 1 NC_015436.1 COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR019591; KEGG: ssm:Spirs_0254 ATPase-like, ParA/MinD; PFAM: ATPase-like, ParA/MinD; SPTR: Iron-sulfur cluster assembly/repair protein; IMG reference gene:2503957619; PFAM: ParA/MinD ATPase like; Anion-transporting ATPase; chromosome partitioning protein ParA 1527635 10495630 Spico_1308 Sphaerochaeta coccoides DSM 17374 chromosome partitioning protein ParA YP_004411898.1 1526703 R 760011 CDS YP_004411899.1 330837258 10495631 1527865..1528125 1 NC_015436.1 KEGG: rop:ROP_14030 serine/threonine protein kinase; SPTR: serine/threonine protein kinase; IMG reference gene:2503957620; hypothetical protein 1528125 10495631 Spico_1309 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411899.1 1527865 D 760011 CDS YP_004411900.1 330837259 10495632 1528150..1530330 1 NC_015436.1 COGs: COG5016 Pyruvate/oxaloacetate carboxyltransferase; InterPro IPR000891:IPR000089; KEGG: ssm:Spirs_4017 biotin/lipoyl attachment domain-containing protein; PFAM: Biotin/lipoyl attachment; Pyruvate carboxyltransferase; PRIAM: Pyruvate carboxylase; SPTR: Pyruvate carboxylase, beta chain; IMG reference gene:2503957621; PFAM: HMGL-like; Biotin-requiring enzyme; Conserved carboxylase domain; pyruvate carboxylase 1530330 10495632 Spico_1310 Sphaerochaeta coccoides DSM 17374 pyruvate carboxylase YP_004411900.1 1528150 D 760011 CDS YP_004411901.1 330837260 10495633 1530650..1531135 1 NC_015436.1 COGs: COG2131 Deoxycytidylate deaminase; InterPro IPR002125; KEGG: clo:HMPREF0868_0032 cytidine and deoxycytidylate deaminase zinc-binding region; PFAM: CMP/dCMP deaminase, zinc-binding; PRIAM: dCMP deaminase; SPTR: dCMP deaminase; IMG reference gene:2503957622; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; dCMP deaminase 1531135 10495633 Spico_1311 Sphaerochaeta coccoides DSM 17374 dCMP deaminase YP_004411901.1 1530650 D 760011 CDS YP_004411902.1 330837261 10495634 complement(1531184..1531423) 1 NC_015436.1 KEGG: seu:SEQ_1013 signal peptidase I; SPTR: signal peptidase I; IMG reference gene:2503957623; hypothetical protein 1531423 10495634 Spico_1312 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411902.1 1531184 R 760011 CDS YP_004411903.1 330837262 10495635 1531597..1532058 1 NC_015436.1 COGs: COG1321 Mn-dependent transcriptional regulator protein; InterPro IPR022689:IPR022687:IPR001367; KEGG: dhd:Dhaf_1581 iron (metal) dependent repressor, DtxR family; PFAM: Iron dependent repressor, N-terminal; Iron dependent repressor; SMART: Iron dependent repressor, diptheria toxin type; SPTR: Iron (Metal) dependent repressor, DtxR family; IMG reference gene:2503957624; PFAM: Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain; DtxR family iron (metal) dependent repressor 1532058 10495635 Spico_1313 Sphaerochaeta coccoides DSM 17374 DtxR family iron (metal) dependent repressor YP_004411903.1 1531597 D 760011 CDS YP_004411904.1 330837263 10495636 1532071..1533030 1 NC_015436.1 COGs: COG1893 Ketopantoate reductase; InterPro IPR003710:IPR013332:IPR013752; KEGG: fsu:Fisuc_0919 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, N-terminal; Ketopantoate reductase ApbA/PanE, C-terminal; PRIAM: 2-dehydropantoate 2-reductase; SPTR: 2-dehydropantoate 2-reductase; TIGRFAM: Ketopantoate reductase ApbA/PanE; IMG reference gene:2503957625; PFAM: Ketopantoate reductase PanE/ApbA; Ketopantoate reductase PanE/ApbA C terminal; TIGRFAM: 2-dehydropantoate 2-reductase; 2-dehydropantoate 2-reductase 1533030 10495636 Spico_1314 Sphaerochaeta coccoides DSM 17374 2-dehydropantoate 2-reductase YP_004411904.1 1532071 D 760011 CDS YP_004411905.1 330837264 10495637 complement(1533075..1533971) 1 NC_015436.1 COGs: COG0349 Ribonuclease D; InterPro IPR002562; KEGG: ssm:Spirs_1372 3'-5' exonuclease; PFAM: 3'-5' exonuclease; SMART: 3'-5' exonuclease; SPTR: 3'-5' exonuclease; IMG reference gene:2503957626; PFAM: 3'-5' exonuclease; HRDC domain; 3'-5' exonuclease 1533971 10495637 Spico_1315 Sphaerochaeta coccoides DSM 17374 3'-5' exonuclease YP_004411905.1 1533075 R 760011 CDS YP_004411906.1 330837265 10495638 complement(1534058..1535920) 1 NC_015436.1 COGs: COG1274 Phosphoenolpyruvate carboxykinase (GTP); HAMAP: Phosphoenolpyruvate carboxykinase, GTP-utilising; InterPro IPR008209; KEGG: tpp:TPASS_0122 phosphoenolpyruvate carboxykinase; PFAM: Phosphoenolpyruvate carboxykinase, GTP-utilising; PRIAM: Phosphoenolpyruvate carboxykinase (GTP); SPTR: Phosphoenolpyruvate carboxykinase [GTP]; IMG reference gene:2503957627; PFAM: Phosphoenolpyruvate carboxykinase; phosphoenolpyruvate carboxykinase 1535920 10495638 Spico_1316 Sphaerochaeta coccoides DSM 17374 phosphoenolpyruvate carboxykinase YP_004411906.1 1534058 R 760011 CDS YP_004411907.1 330837266 10495639 complement(1536052..1536612) 1 NC_015436.1 COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: cce:Ccel_1678 transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; SMART: Cyclic nucleotide-binding domain; SPTR: Cyclic nucleotide-binding:Bacterial regulatory protein, Crp; IMG reference gene:2503957628; PFAM: Cyclic nucleotide-binding domain; Crp/Fnr family transcriptional regulator 1536612 10495639 Spico_1317 Sphaerochaeta coccoides DSM 17374 Crp/Fnr family transcriptional regulator YP_004411907.1 1536052 R 760011 CDS YP_004411908.1 330837267 10495640 1536863..1539157 1 NC_015436.1 COGs: COG0826 Collagenase and related protease; InterPro IPR001539; KEGG: sta:STHERM_c21690 hypothetical protein; PFAM: Peptidase U32; SPTR: uncharacterized protein; IMG reference gene:2503957629; PFAM: Collagenase; Peptidase U32; peptidase U32 1539157 10495640 Spico_1318 Sphaerochaeta coccoides DSM 17374 peptidase U32 YP_004411908.1 1536863 D 760011 CDS YP_004411909.1 330837268 10495641 complement(1539269..1540294) 1 NC_015436.1 COGs: COG0136 Aspartate-semialdehyde dehydrogenase; InterPro IPR000534:IPR005676:IPR012280; KEGG: ssm:Spirs_4027 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, NAD-binding; Semialdehyde dehydrogenase, dimerisation domain; PRIAM: Aspartate-semialdehyde dehydrogenase; SMART: Semialdehyde dehydrogenase, NAD-binding; SPTR: Aspartate-semialdehyde dehydrogenase; TIGRFAM: Aspartate-semialdehyde dehydrogenase, peptidoglycan lacking; IMG reference gene:2503957630; PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms); aspartate-semialdehyde dehydrogenase 1540294 10495641 Spico_1319 Sphaerochaeta coccoides DSM 17374 aspartate-semialdehyde dehydrogenase YP_004411909.1 1539269 R 760011 CDS YP_004411910.1 330837269 10495643 complement(1540671..1541807) 1 NC_015436.1 KEGG: blo:BL0787 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957632; PFAM: Protein of unknown function (DUF2974); hypothetical protein 1541807 10495643 Spico_1321 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411910.1 1540671 R 760011 CDS YP_004411911.1 330837270 10495645 1542418..1544223 1 NC_015436.1 COGs: COG5421 Transposase; InterPro IPR002559; KEGG: cob:COB47_1677 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; IMG reference gene:2503957634; PFAM: Transposase DDE domain; transposase IS4 family protein 1544223 10495645 Spico_1322 Sphaerochaeta coccoides DSM 17374 transposase IS4 family protein YP_004411911.1 1542418 D 760011 CDS YP_004411912.1 330837271 10495647 complement(1544856..1546418) 1 NC_015436.1 COGs: COG0519 GMP synthase PP-ATPase domain/subunit; HAMAP: GMP synthase; InterProIPR004739:IPR001674:IPR000991:IPR004506:IPR 022955; KEGG: sat:SYN_01626 GMP synthase; PFAM: GMP synthase, C-terminal; Glutamine amidotransferase class-I, C-terminal; tRNA-specific 2-thiouridylase; PRIAM: GMP synthase (glutamine-hydrolyzing); SPTR: GMP synthase (Glutamine-hydrolyzing); TIGRFAM: GMP synthase, C-terminal; GMP synthase, N-terminal; IMG reference gene:2503957636; PFAM: Glutamine amidotransferase class-I; GMP synthase C terminal domain; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit; GMP synthase 1546418 10495647 Spico_1324 Sphaerochaeta coccoides DSM 17374 GMP synthase YP_004411912.1 1544856 R 760011 CDS YP_004411913.1 330837272 10495648 complement(1546543..1547121) 1 NC_015436.1 COGs: COG4720 membrane protein; InterPro IPR009825; KEGG: tko:TK2102 hypothetical protein; PFAM: Protein of unknown function DUF1393; SPTR: Hypothetical membrane protein, conserved, DUF1393 family; IMG reference gene:2503957637; PFAM: Protein of unknown function (DUF1393); hypothetical protein 1547121 10495648 Spico_1325 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411913.1 1546543 R 760011 CDS YP_004411914.1 330837273 10495649 complement(1547203..1547979) 1 NC_015436.1 COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339; KEGG: sti:Sthe_3088 cobalt transport protein; PFAM: Cobalt transport protein; SPTR: Cobalt transport protein; IMG reference gene:2503957638; PFAM: Cobalt transport protein; cobalt transport protein 1547979 10495649 Spico_1326 Sphaerochaeta coccoides DSM 17374 cobalt transport protein YP_004411914.1 1547203 R 760011 CDS YP_004411915.1 330837274 10495650 complement(1547976..1549508) 1 NC_015436.1 COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003593:IPR003439; KEGG: bad:BAD_0600 ABC-type cobalt transport system, ATPase component; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: uncharacterized protein; IMG reference gene:2503957639; PFAM: ABC transporter; ABC transporter 1549508 10495650 Spico_1327 Sphaerochaeta coccoides DSM 17374 ABC transporter YP_004411915.1 1547976 R 760011 CDS YP_004411916.1 330837275 10495651 complement(1549519..1550271) 1 NC_015436.1 COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: ssm:Spirs_3805 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: 1-acyl-sn-glycerol-3-phosphate acyltransferase; IMG reference gene:2503957640; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; phospholipid/glycerol acyltransferase 1550271 10495651 Spico_1328 Sphaerochaeta coccoides DSM 17374 phospholipid/glycerol acyltransferase YP_004411916.1 1549519 R 760011 CDS YP_004411917.1 330837276 10495652 complement(1550291..1552006) 1 NC_015436.1 COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR001140:IPR003439; KEGG: ssm:Spirs_4147 ABC transporter related protein; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, transmembrane region; IMG reference gene:2503957641; PFAM: ABC transporter transmembrane region; ABC transporter; xenobiotic-transporting ATPase 1552006 10495652 Spico_1329 Sphaerochaeta coccoides DSM 17374 xenobiotic-transporting ATPase YP_004411917.1 1550291 R 760011 CDS YP_004411918.1 330837277 10495653 complement(1552006..1553895) 1 NC_015436.1 COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR014001:IPR001650:IPR011545; KEGG: ssm:Spirs_3800 DEAD/DEAH box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: ATP-dependent RNA helicase DbpA; IMG reference gene:2503957642; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; DEAD/DEAH box helicase 1553895 10495653 Spico_1330 Sphaerochaeta coccoides DSM 17374 DEAD/DEAH box helicase YP_004411918.1 1552006 R 760011 CDS YP_004411919.1 330837278 10495654 complement(1554029..1554847) 1 NC_015436.1 COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR001544; KEGG: ssm:Spirs_0479 aminotransferase class IV; PFAM: Aminotransferase, class IV; SPTR: Aminotransferase class IV; IMG reference gene:2503957643; PFAM: Aminotransferase class IV; class IV aminotransferase 1554847 10495654 Spico_1331 Sphaerochaeta coccoides DSM 17374 class IV aminotransferase YP_004411919.1 1554029 R 760011 CDS YP_004411920.1 330837279 10495655 complement(1554925..1557897) 1 NC_015436.1 COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR003593:IPR018541:IPR002543; KEGG: ssm:Spirs_3823 cell division protein FtsK/SpoIIIE; PFAM: Cell divisionFtsK/SpoIIIE; DNA translocase FtsK gamma; SMART: DNA translocase FtsK gamma; ATPase, AAA+ type, core; SPTR: Predicted DNA translocase FtsK; IMG reference gene:2503957644; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family; DNA translocase FtsK 1557897 10495655 Spico_1332 Sphaerochaeta coccoides DSM 17374 DNA translocase FtsK YP_004411920.1 1554925 R 760011 CDS YP_004411921.1 330837280 10495656 complement(1558019..1558702) 1 NC_015436.1 COGs: COG0357 S-adenosylmethionine-dependent methyltransferase involved in cell division; HAMAP: rRNA small subunit methyltransferase G; InterPro IPR003682; KEGG: ssm:Spirs_3828 methyltransferase GidB; PFAM: rRNA small subunit methyltransferase G; SPTR: Ribosomal RNA small subunit methyltransferase G; TIGRFAM: rRNA small subunit methyltransferase G; IMG reference gene:2503957645; PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA (guanine(527)-N(7))-methyltransferase GidB; Ribosomal RNA small subunit methyltransferase G 1558702 10495656 Spico_1333 Sphaerochaeta coccoides DSM 17374 Ribosomal RNA small subunit methyltransferase G YP_004411921.1 1558019 R 760011 CDS YP_004411922.1 330837281 10495657 complement(1558686..1560578) 1 NC_015436.1 COGs: COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division; HAMAP: Glucose-inhibited division protein A; InterPro IPR004416:IPR002218; KEGG: ssm:Spirs_3829 glucose inhibited division protein A; PFAM: Glucose-inhibited division protein A-related; SPTR: Glucose-inhibited division protein A; TIGRFAM: Glucose-inhibited division protein A; IMG reference gene:2503957646; PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A; tRNA uridine 5-carboxymethylaminomethyl modification protein MnmG 1560578 10495657 Spico_1334 Sphaerochaeta coccoides DSM 17374 tRNA uridine 5-carboxymethylaminomethyl modification protein MnmG YP_004411922.1 1558686 R 760011 CDS YP_004411923.1 330837282 10495658 complement(1560657..1562120) 1 NC_015436.1 COGs: COG0486 GTPase; HAMAP: tRNA modification GTPase TrmE; InterPro IPR004520:IPR005225:IPR018948:IPR002917; KEGG: sta:STHERM_c02910 tRNA modification GTPase; PFAM: GTP-binding protein, HSR1-related; GTP-binding protein TrmE, N-terminal; SPTR: tRNA modification GTPase; TIGRFAM: tRNA modification GTPase TrmE; Small GTP-binding protein; IMG reference gene:2503957647; PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein domain; tRNA modification GTPase mnmE 1562120 10495658 Spico_1335 Sphaerochaeta coccoides DSM 17374 tRNA modification GTPase mnmE YP_004411923.1 1560657 R 760011 CDS YP_004411924.1 330837283 10495659 1562124..1563194 1 NC_015436.1 COGs: COG2269 Truncated possibly inactive lysyl-tRNA synthetase (class II); InterPro IPR004364; KEGG: ssm:Spirs_3665 tRNA synthetase class II (D K and N); PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); PRIAM: Lysine--tRNA ligase; SPTR: Lysyl-tRNA synthetase; IMG reference gene:2503957648; PFAM: tRNA synthetases class II (D, K and N); lysine--tRNA ligase 1563194 10495659 Spico_1336 Sphaerochaeta coccoides DSM 17374 lysine--tRNA ligase YP_004411924.1 1562124 D 760011 CDS YP_004411925.1 330837284 10495660 1563305..1563868 1 NC_015436.1 COGs: COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); HAMAP: Translation elongation factor P; InterPro IPR015365:IPR011768:IPR013185:IPR001059; KEGG: ssm:Spirs_3666 translation elongation factor P; PFAM: Elongation factor P, C-terminal; Translation elongation factor, KOW-like; Translation elongation factor P/YeiP, central; SMART: Elongation factor P, C-terminal; SPTR: uncharacterized protein; TIGRFAM: Translation elongation factor P; IMG reference gene:2503957649; PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P; translation elongation factor P (EF-P) 1563868 10495660 Spico_1337 Sphaerochaeta coccoides DSM 17374 translation elongation factor P (EF-P) YP_004411925.1 1563305 D 760011 CDS YP_004411926.1 330837285 10495661 complement(1563983..1565059) 1 NC_015436.1 COGs: COG1509 Lysine 2 3-aminomutase; InterPro IPR003739:IPR007197; KEGG: afw:Anae109_1316 lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM; PRIAM: Lysine 2,3-aminomutase; SPTR: Lysine 2,3-aminomutase YodO family protein; TIGRFAM: Conserved hyprothetical protein CHP00238, KamA; IMG reference gene:2503957650; PFAM: Radical SAM superfamily; TIGRFAM: KamA family protein; lysine 2,3-aminomutase YodO family protein 1565059 10495661 Spico_1338 Sphaerochaeta coccoides DSM 17374 lysine 2,3-aminomutase YodO family protein YP_004411926.1 1563983 R 760011 CDS YP_004411927.1 330837286 10495662 1565189..1566511 1 NC_015436.1 COGs: COG2211 Na+/melibiose symporter and related transporter; InterPro IPR011701; KEGG: ssm:Spirs_3673 major facilitator superfamily MFS_1; PFAM: Major facilitator superfamily MFS-1; SPTR: Transporter, ; IMG reference gene:2503957651; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein 1566511 10495662 Spico_1339 Sphaerochaeta coccoides DSM 17374 major facilitator superfamily protein YP_004411927.1 1565189 D 760011 CDS YP_004411928.1 330837287 10495663 1566628..1567302 1 NC_015436.1 InterPro IPR012506; KEGG: sgr:SGR_5669 hypothetical protein; PFAM: YhhN-like; SPTR: YhhN family protein; IMG reference gene:2503957652; PFAM: YhhN-like protein; hypothetical protein 1567302 10495663 Spico_1340 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411928.1 1566628 D 760011 CDS YP_004411929.1 330837288 10495664 complement(1567414..1571313) 1 NC_015436.1 InterPro IPR011493; KEGG: hwa:HQ1081A halomucin; SPTR: Halomucin; IMG reference gene:2503957653; hypothetical protein 1571313 10495664 Spico_1341 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411929.1 1567414 R 760011 CDS YP_004411930.1 330837289 10495665 complement(1571776..1572873) 1 NC_015436.1 KEGG: pfa:PF10_0351 probable protein; SPTR: Probable protein; IMG reference gene:2503957654; hypothetical protein 1572873 10495665 Spico_1342 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411930.1 1571776 R 760011 CDS YP_004411931.1 330837290 10495666 complement(1572922..1573530) 1 NC_015436.1 COGs: COG0237 Dephospho-CoA kinase; HAMAP: Dephospho-CoA kinase; InterPro IPR001977; KEGG: ssm:Spirs_3675 dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; SPTR: Dephospho-CoA kinase; TIGRFAM: Dephospho-CoA kinase; IMG reference gene:2503957655; PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; dephospho-CoA kinase 1573530 10495666 Spico_1343 Sphaerochaeta coccoides DSM 17374 dephospho-CoA kinase YP_004411931.1 1572922 R 760011 CDS YP_004411932.1 330837291 10495667 complement(1573530..1576370) 1 NC_015436.1 COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterProIPR002421:IPR008918:IPR002562:IPR001098:IPR 018320:IPR020046:IPR020047; KEGG: ssm:Spirs_3676 DNA polymerase I; PFAM: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, alpha-helical arch, N-terminal; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; PRIAM: DNA-directed DNA polymerase; SMART: 5'-3' exonuclease, N-terminal; Helix-hairpin-helix motif, class 2; 3'-5' exonuclease; DNA-directed DNA polymerase, family A, palm domain; SPTR: DNA polymerase I; TIGRFAM: DNA polymerase 1; IMG reference gene:2503957656; PFAM: 5'-3' exonuclease, C-terminal SAM fold; 3'-5' exonuclease; 5'-3' exonuclease, N-terminal resolvase-like domain; DNA polymerase A; TIGRFAM: DNA polymerase I; DNA polymerase I 1576370 10495667 Spico_1344 Sphaerochaeta coccoides DSM 17374 DNA polymerase I YP_004411932.1 1573530 R 760011 CDS YP_004411933.1 330837292 10495668 complement(1576391..1577170) 1 NC_015436.1 COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; InterPro IPR001279; KEGG: ssm:Spirs_3682 beta-lactamase domain protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; SPTR: uncharacterized protein; IMG reference gene:2503957657; PFAM: Metallo-beta-lactamase superfamily; beta-lactamase domain-containing protein 1577170 10495668 Spico_1345 Sphaerochaeta coccoides DSM 17374 beta-lactamase domain-containing protein YP_004411933.1 1576391 R 760011 CDS YP_004411934.1 330837293 10495669 complement(1577167..1577517) 1 NC_015436.1 KEGG: ani:AN1767.2 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957658; hypothetical protein 1577517 10495669 Spico_1346 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411934.1 1577167 R 760011 CDS YP_004411935.1 330837294 10495670 complement(1577727..1578329) 1 NC_015436.1 KEGG: gem:GM21_0672 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; IMG reference gene:2503957659; hypothetical protein 1578329 10495670 Spico_1347 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411935.1 1577727 R 760011 CDS YP_004411936.1 330837295 10495671 complement(1578558..1579193) 1 NC_015436.1 KEGG: pic:PICST_57741 hypothetical protein; SPTR: Probable outer membrane porin; IMG reference gene:2503957660; hypothetical protein 1579193 10495671 Spico_1348 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411936.1 1578558 R 760011 CDS YP_004411937.1 330837296 10495672 complement(1579334..1581247) 1 NC_015436.1 COGs: COG0171 NAD synthase; InterPro IPR003694:IPR003010:IPR022310; KEGG: ols:Olsu_0182 NAD+ synthetase; PFAM: NAD/GMP synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PRIAM: NAD(+) synthase (glutamine-hydrolyzing); SPTR: uncharacterized protein; TIGRFAM: NAD synthase; IMG reference gene:2503957661; PFAM: NAD synthase; Carbon-nitrogen hydrolase; TIGRFAM: NAD+ synthetase; NAD+ synthetase 1581247 10495672 Spico_1349 Sphaerochaeta coccoides DSM 17374 NAD+ synthetase YP_004411937.1 1579334 R 760011 CDS YP_004411938.1 330837297 10495673 complement(1581244..1582422) 1 NC_015436.1 COGs: COG2265 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase; InterPro IPR010280; KEGG: aca:ACP_2578 23S rRNA (uracil-5-)-methyltransferase; PFAM: (Uracil-5)-methyltransferase; SPTR: tRNA (Uracil-5-)-methyltransferase; IMG reference gene:2503957662; PFAM: tRNA (Uracil-5-)-methyltransferase; Met-10+ like-protein; (uracil-5)-methyltransferase 1582422 10495673 Spico_1350 Sphaerochaeta coccoides DSM 17374 (uracil-5)-methyltransferase YP_004411938.1 1581244 R 760011 CDS YP_004411939.1 330837298 10495674 complement(1582419..1584194) 1 NC_015436.1 COGs: COG1164 Oligoendopeptidase F; InterPro IPR013647:IPR001567; KEGG: tde:TDE2001 oligoendopeptidase F, PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F; Peptidase M3B, oligopeptidase F, N-terminal; SPTR: Oligoendopeptidase F, ; IMG reference gene:2503957663; PFAM: Oligopeptidase F; Peptidase M3; TIGRFAM: oligoendopeptidase, pepF/M3 family; peptidase M3A and M3B thimet/oligopeptidase F 1584194 10495674 Spico_1351 Sphaerochaeta coccoides DSM 17374 peptidase M3A and M3B thimet/oligopeptidase F YP_004411939.1 1582419 R 760011 CDS YP_004411940.1 330837299 10495675 complement(1584281..1585654) 1 NC_015436.1 COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR003593:IPR002078:IPR002197; KEGG: ssm:Spirs_0494 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver domain; ATPase, AAA+ type, core; SPTR: Two component, sigma54 specific, transcriptional regulator, Fis family; IMG reference gene:2503957664; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; Fis family transcriptional regulator 1585654 10495675 Spico_1352 Sphaerochaeta coccoides DSM 17374 Fis family transcriptional regulator YP_004411940.1 1584281 R 760011 CDS YP_004411941.1 330837300 10495676 complement(1585651..1586985) 1 NC_015436.1 COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: ssm:Spirs_0495 integral membrane sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Sensor histidine kinase; IMG reference gene:2503957665; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase 1586985 10495676 Spico_1353 Sphaerochaeta coccoides DSM 17374 integral membrane sensor signal transduction histidine kinase YP_004411941.1 1585651 R 760011 CDS YP_004411942.1 330837301 10495677 complement(1587150..1588331) 1 NC_015436.1 COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: sta:STHERM_c10100 hypothetical protein; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: uncharacterized protein; IMG reference gene:2503957666; PFAM: Predicted permease; hypothetical protein 1588331 10495677 Spico_1354 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411942.1 1587150 R 760011 CDS YP_004411943.1 330837302 10495678 complement(1588321..1589007) 1 NC_015436.1 COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: cpc:Cpar_0807 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; IMG reference gene:2503957667; PFAM: ABC transporter; phosphonate-transporting ATPase 1589007 10495678 Spico_1355 Sphaerochaeta coccoides DSM 17374 phosphonate-transporting ATPase YP_004411943.1 1588321 R 760011 CDS YP_004411944.1 330837303 10495679 complement(1589032..1590174) 1 NC_015436.1 COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: tde:TDE2284 RND family efflux transporter MFP subunit; PFAM: Secretion protein HlyD; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; IMG reference gene:2503957668; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter MFP subunit 1590174 10495679 Spico_1356 Sphaerochaeta coccoides DSM 17374 RND family efflux transporter MFP subunit YP_004411944.1 1589032 R 760011 CDS YP_004411945.1 330837304 10495680 complement(1590201..1591658) 1 NC_015436.1 KEGG: tgu:100231991 dual specificity phosphatase 27 (); SPTR: Outer membrane efflux protein; IMG reference gene:2503957669; hypothetical protein 1591658 10495680 Spico_1357 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411945.1 1590201 R 760011 CDS YP_004411946.1 330837305 10495681 1592219..1593148 1 NC_015436.1 COGs: COG1281 Disulfide bond chaperones of the HSP33 family; InterPro IPR000397; KEGG: ssm:Spirs_0341 HSP33 protein; PFAM: Heat shock protein Hsp33 protein; SPTR: Chaperonin HslO; IMG reference gene:2503957670; PFAM: Hsp33 protein; heat shock protein 33 1593148 10495681 Spico_1358 Sphaerochaeta coccoides DSM 17374 heat shock protein 33 YP_004411946.1 1592219 D 760011 CDS YP_004411947.1 330837306 10495682 1593211..1595481 1 NC_015436.1 COGs: COG0116 N6-adenine-specific DNA methylase; HAMAP: S-adenosyl-L-dependent RNA methyltransferase, bacteria; InterPro IPR004114:IPR000241:IPR017244; KEGG: alv:Alvin_2173 RNA methylase; PFAM: RNA methylase; THUMP; PRIAM: rRNA (guanine-N(2)-)-methyltransferase; SMART: THUMP; SPTR: Ribosomal RNA large subunit methyltransferase L; IMG reference gene:2503957671; PFAM: RNA methylase UPF0020; S-adenosylmethionine-dependent methyltransferase; THUMP domain; Ribosomal RNA large subunit methyltransferase L 1595481 10495682 Spico_1359 Sphaerochaeta coccoides DSM 17374 Ribosomal RNA large subunit methyltransferase L YP_004411947.1 1593211 D 760011 CDS YP_004411948.1 330837307 10495683 1595593..1596030 1 NC_015436.1 COGs: COG1970 Large-conductance mechanosensitive channel; HAMAP: Large-conductance mechanosensitive channel; InterPro IPR001185; KEGG: cco:CCC13826_1549 large-conductance mechanosensitive channel; PFAM: Large-conductance mechanosensitive channel; SPTR: Large-conductance mechanosensitive channel; TIGRFAM: Large-conductance mechanosensitive channel; IMG reference gene:2503957672; PFAM: Large-conductance mechanosensitive channel, MscL; TIGRFAM: large conductance mechanosensitive channel protein; Large-conductance mechanosensitive channel 1596030 10495683 Spico_1360 Sphaerochaeta coccoides DSM 17374 Large-conductance mechanosensitive channel YP_004411948.1 1595593 D 760011 CDS YP_004411949.1 330837308 10495684 complement(1596157..1596918) 1 NC_015436.1 COGs: COG2184 Protein involved in cell division; InterPro IPR003812; KEGG: hmo:HM1_0604 cell filamentation protein fic, PFAM: Filamentation induced by cAMP/death on curing-related; SPTR: Cell filamentation protein fic, ; IMG reference gene:2503957673; PFAM: Fic/DOC family; Fic family protein 1596918 10495684 Spico_1361 Sphaerochaeta coccoides DSM 17374 Fic family protein YP_004411949.1 1596157 R 760011 CDS YP_004411950.1 330837309 10495685 complement(1597057..1598274) 1 NC_015436.1 KEGG: alv:Alvin_0840 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957674; hypothetical protein 1598274 10495685 Spico_1362 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411950.1 1597057 R 760011 CDS YP_004411951.1 330837310 10495686 complement(1598469..1599638) 1 NC_015436.1 COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: ssm:Spirs_1400 ROK family protein; PFAM: ROK; SPTR: transcriptional regulator; IMG reference gene:2503957675; PFAM: ROK family; ROK family protein 1599638 10495686 Spico_1363 Sphaerochaeta coccoides DSM 17374 ROK family protein YP_004411951.1 1598469 R 760011 CDS YP_004411952.1 330837311 10495688 complement(1599931..1601211) 1 NC_015436.1 COGs: COG3681 conserved hypothetical protein; HAMAP: Uncharacterised protein family UPF0597; InterPro IPR021144; KEGG: bpo:BP951000_1867 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957677; PFAM: Serine dehydratase alpha chain; hypothetical protein 1601211 10495688 Spico_1365 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411952.1 1599931 R 760011 CDS YP_004411953.1 330837312 10495689 complement(1601222..1602850) 1 NC_015436.1 KEGG: osa:4351396 hypothetical protein; SPTR: M18 family aminopeptidase; IMG reference gene:2503957678; hypothetical protein 1602850 10495689 Spico_1366 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411953.1 1601222 R 760011 CDS YP_004411954.1 330837313 10495690 complement(1602894..1603742) 1 NC_015436.1 COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: csh:Closa_1292 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: uncharacterized protein; IMG reference gene:2503957679; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 1603742 10495690 Spico_1367 Sphaerochaeta coccoides DSM 17374 binding-protein-dependent transport system inner membrane protein YP_004411954.1 1602894 R 760011 CDS YP_004411955.1 330837314 10495691 complement(1603744..1604634) 1 NC_015436.1 COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: csh:Closa_1291 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Transport protein; IMG reference gene:2503957680; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 1604634 10495691 Spico_1368 Sphaerochaeta coccoides DSM 17374 binding-protein-dependent transport system inner membrane protein YP_004411955.1 1603744 R 760011 CDS YP_004411956.1 330837315 10495692 complement(1604701..1606053) 1 NC_015436.1 COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: csh:Closa_1290 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: uncharacterized protein; IMG reference gene:2503957681; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein 1606053 10495692 Spico_1369 Sphaerochaeta coccoides DSM 17374 ABC transporter substrate-binding protein YP_004411956.1 1604701 R 760011 CDS YP_004411957.1 330837316 10495693 complement(1606050..1607003) 1 NC_015436.1 KEGG: csh:Closa_1289 uroporphyrinogen-III decarboxylase-like protein; SPTR: uncharacterized protein; IMG reference gene:2503957682; PFAM: Uroporphyrinogen decarboxylase (URO-D); hypothetical protein 1607003 10495693 Spico_1370 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411957.1 1606050 R 760011 CDS YP_004411958.1 330837317 10495694 1607188..1607967 1 NC_015436.1 COGs: COG2964 conserved hypothetical protein; InterPro IPR013559; KEGG: hiq:CGSHiGG_06150 hypothetical protein; PFAM: YheO-like; SPTR: uncharacterized protein; IMG reference gene:2503957683; PFAM: YheO-like PAS domain; hypothetical protein 1607967 10495694 Spico_1371 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411958.1 1607188 D 760011 CDS YP_004411959.1 330837318 10495695 complement(1607962..1608723) 1 NC_015436.1 COGs: COG4821 Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain; KEGG: tpe:Tpen_1090 hypothetical protein; SPTR: Phosphoheptose isomerase, ; IMG reference gene:2503957684; hypothetical protein 1608723 10495695 Spico_1372 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411959.1 1607962 R 760011 CDS YP_004411960.1 330837319 10495696 complement(1608890..1610245) 1 NC_015436.1 KEGG: hmg:100208216 similar to Collagen alpha-5(VI) chain; SPTR: Hemagglutinin-neuraminidase; IMG reference gene:2503957685; hypothetical protein 1610245 10495696 Spico_1373 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411960.1 1608890 R 760011 CDS YP_004411961.1 330837320 10495697 complement(1610330..1610692) 1 NC_015436.1 KEGG: aoe:Clos_2735 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957686; hypothetical protein 1610692 10495697 Spico_1374 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411961.1 1610330 R 760011 CDS YP_004411962.1 330837321 10495698 complement(1610832..1611017) 1 NC_015436.1 KEGG: cbe:Cbei_1260 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957687; hypothetical protein 1611017 10495698 Spico_1375 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411962.1 1610832 R 760011 CDS YP_004411963.1 330837322 10495699 complement(1611095..1612087) 1 NC_015436.1 COGs: COG0180 Tryptophanyl-tRNA synthetase; InterPro IPR002306:IPR002305; KEGG: esi:Exig_2059 tryptophanyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib; PRIAM: Tryptophan--tRNA ligase; SPTR: Tryptophan--tRNA ligase; TIGRFAM: Tryptophanyl-tRNA synthetase, class Ib; IMG reference gene:2503957688; PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase; tryptophanyl-tRNA synthetase 1612087 10495699 Spico_1376 Sphaerochaeta coccoides DSM 17374 tryptophanyl-tRNA synthetase YP_004411963.1 1611095 R 760011 CDS YP_004411964.1 330837323 10495700 1612653..1615298 1 NC_015436.1 COGs: COG0474 Cation transport ATPase; InterProIPR004014:IPR006415:IPR001757:IPR008250:IPR 005834:IPR006068; KEGG: acl:ACL_1281 magnesium transporting ATPase, P-type; PFAM: ATPase, P-type, ATPase-associated domain; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal; PRIAM: Magnesium-importing ATPase; SMART: ATPase, P-type cation-transporter, N-terminal; SPTR: Magnesium transporting ATPase, P-type; TIGRFAM: ATPase, P-type, magnesium-translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; IMG reference gene:2503957689; PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; magnesium-translocating P-type ATPase; magnesium-translocating P-type ATPase 1615298 10495700 Spico_1377 Sphaerochaeta coccoides DSM 17374 magnesium-translocating P-type ATPase YP_004411964.1 1612653 D 760011 CDS YP_004411965.1 330837324 10495701 complement(1615386..1616552) 1 NC_015436.1 COGs: COG1912 conserved hypothetical protein; KEGG: ssm:Spirs_0807 peptidoglycan-binding lysin domain protein; SPTR: uncharacterized protein; IMG reference gene:2503957690; PFAM: S-adenosyl-l-methionine hydroxide adenosyltransferase; Tyrosine phosphatase; peptidoglycan-binding lysin domain-containing protein 1616552 10495701 Spico_1378 Sphaerochaeta coccoides DSM 17374 peptidoglycan-binding lysin domain-containing protein YP_004411965.1 1615386 R 760011 CDS YP_004411966.1 330837325 10495703 1616981..1618150 1 NC_015436.1 COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: cth:Cthe_2799 cystathionine gamma-synthase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; PRIAM: Cystathionine gamma-lyase; SPTR: Cystathionine gamma-synthase; IMG reference gene:2503957692; PFAM: Cys/Met metabolism PLP-dependent enzyme; cystathionine gamma-lyase 1618150 10495703 Spico_1380 Sphaerochaeta coccoides DSM 17374 cystathionine gamma-lyase YP_004411966.1 1616981 D 760011 CDS YP_004411967.1 330837326 10495704 complement(1618256..1619866) 1 NC_015436.1 COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR001789:IPR018060:IPR000005; KEGG: cpy:Cphy_0293 two component AraC family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; HTH transcriptional regulator, AraC; SMART: Signal transduction response regulator, receiver domain; Helix-turn-helix, AraC type, DNA binding domain; SPTR: Two component transcriptional regulator, AraC family; IMG reference gene:2503957693; PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator 1619866 10495704 Spico_1381 Sphaerochaeta coccoides DSM 17374 AraC family transcriptional regulator YP_004411967.1 1618256 R 760011 CDS YP_004411968.1 330837327 10495705 complement(1619859..1620773) 1 NC_015436.1 COGs: COG2972 signal transduction protein with a C-terminal ATPase domain; InterPro IPR003660:IPR003594:IPR010559; KEGG: csh:Closa_1925 integral membrane sensor signal transduction histidine kinase; PFAM: Signal transduction histidine kinase, internal region; HAMP linker domain; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; HAMP linker domain; SPTR: Sensor histidine kinase; IMG reference gene:2503957694; PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; integral membrane sensor signal transduction histidine kinase 1620773 10495705 Spico_1382 Sphaerochaeta coccoides DSM 17374 integral membrane sensor signal transduction histidine kinase YP_004411968.1 1619859 R 760011 CDS YP_004411969.1 330837328 10495706 1620874..1622145 1 NC_015436.1 COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: cpy:Cphy_0291 extracellular solute-binding protein; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein family 1; IMG reference gene:2503957695; PFAM: Bacterial extracellular solute-binding protein; carbohydrate ABC transporter substrate-binding protein 1622145 10495706 Spico_1383 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter substrate-binding protein YP_004411969.1 1620874 D 760011 CDS YP_004411970.1 330837329 10495707 1622210..1623121 1 NC_015436.1 COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: cpy:Cphy_0290 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Transmembrane permease MsmF; IMG reference gene:2503957696; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 1 1623121 10495707 Spico_1384 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter membrane protein 1 YP_004411970.1 1622210 D 760011 CDS YP_004411971.1 330837330 10495708 1623132..1623962 1 NC_015436.1 COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: cpy:Cphy_0289 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503957697; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 2 1623962 10495708 Spico_1385 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter membrane protein 2 YP_004411971.1 1623132 D 760011 CDS YP_004411972.1 330837331 10495709 1624142..1626136 1 NC_015436.1 InterPro IPR012480; KEGG: cpy:Cphy_3022 heparinase II/III family protein; PFAM: Heparinase II/III-like; SPTR: Heparinase II/III family protein; IMG reference gene:2503957698; PFAM: Heparinase II/III-like protein; heparinase II/III family protein 1626136 10495709 Spico_1386 Sphaerochaeta coccoides DSM 17374 heparinase II/III family protein YP_004411972.1 1624142 D 760011 CDS YP_004411973.1 330837332 10495710 1626410..1627174 1 NC_015436.1 COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: cce:Ccel_2618 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Short-chain dehydrogenase/reductase SDR; IMG reference gene:2503957699; PFAM: short chain dehydrogenase; 3-oxoacyl-ACP reductase 1627174 10495710 Spico_1387 Sphaerochaeta coccoides DSM 17374 3-oxoacyl-ACP reductase YP_004411973.1 1626410 D 760011 CDS YP_004411974.1 330837333 10495711 1627523..1629649 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR011110; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; IMG reference gene:2503957700; PFAM: Regulator of chromosome condensation (RCC1) repeat; hypothetical protein 1629649 10495711 Spico_1388 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411974.1 1627523 D 760011 CDS YP_004411975.1 330837334 10495712 1630057..1632375 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR011110; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; IMG reference gene:2503957701; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; hypothetical protein 1632375 10495712 Spico_1389 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411975.1 1630057 D 760011 CDS YP_004411976.1 330837335 10495713 1632496..1633695 1 NC_015436.1 COGs: COG3214 conserved hypothetical protein; InterPro IPR009351; KEGG: bbe:BBR47_29660 hypothetical protein; PFAM: Protein of unknown function DUF1006; SPTR: uncharacterized protein; IMG reference gene:2503957702; PFAM: Protein of unknown function (DUF1006); hypothetical protein 1633695 10495713 Spico_1390 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411976.1 1632496 D 760011 CDS YP_004411977.1 330837336 10495714 complement(1633717..1634577) 1 NC_015436.1 COGs: COG1912 conserved hypothetical protein; InterPro IPR002747; KEGG: sga:GALLO_1836 hypothetical protein; PFAM: Protein of unknown function DUF62; SPTR: Molybdate/tungstate binding protein; IMG reference gene:2503957703; PFAM: S-adenosyl-l-methionine hydroxide adenosyltransferase; hypothetical protein 1634577 10495714 Spico_1391 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411977.1 1633717 R 760011 CDS YP_004411978.1 330837337 10495715 complement(1634635..1635486) 1 NC_015436.1 COGs: COG1912 conserved hypothetical protein; InterPro IPR002747; KEGG: lbu:LBUL_1585 hypothetical protein; PFAM: Protein of unknown function DUF62; SPTR: Molybdate/tungstate binding protein; IMG reference gene:2503957704; PFAM: S-adenosyl-l-methionine hydroxide adenosyltransferase; hypothetical protein 1635486 10495715 Spico_1392 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411978.1 1634635 R 760011 CDS YP_004411979.1 330837338 10495716 complement(1635483..1636937) 1 NC_015436.1 COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR010964:IPR002933:IPR011650; KEGG: gtn:GTNG_2735 Xaa-His dipeptidase; PFAM: Peptidase M20; Peptidase M20, dimerisation; SPTR: M20 family peptidase PepV; TIGRFAM: Peptidase M20A, peptidase V-related; IMG reference gene:2503957705; PFAM: Peptidase M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: dipeptidase; dipeptidase 1636937 10495716 Spico_1393 Sphaerochaeta coccoides DSM 17374 dipeptidase YP_004411979.1 1635483 R 760011 CDS YP_004411980.1 330837339 10495717 complement(1636937..1637791) 1 NC_015436.1 COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339; KEGG: ssm:Spirs_3591 cobalt transport protein; PFAM: Cobalt transport protein; SPTR: uncharacterized protein; IMG reference gene:2503957706; PFAM: Cobalt transport protein; cobalt transport protein 1637791 10495717 Spico_1394 Sphaerochaeta coccoides DSM 17374 cobalt transport protein YP_004411980.1 1636937 R 760011 CDS YP_004411981.1 330837340 10495718 complement(1637788..1639503) 1 NC_015436.1 COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003593:IPR003439; KEGG: ssm:Spirs_3590 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter domain-containing protein; IMG reference gene:2503957707; PFAM: ABC transporter; ATP-binding cassette cobalt transporter; monosaccharide-transporting ATPase 1639503 10495718 Spico_1395 Sphaerochaeta coccoides DSM 17374 monosaccharide-transporting ATPase YP_004411981.1 1637788 R 760011 CDS YP_004411982.1 330837341 10495719 complement(1639500..1640090) 1 NC_015436.1 InterPro IPR009825; KEGG: ssm:Spirs_3589 protein of unknown function DUF1393; PFAM: Protein of unknown function DUF1393; SPTR: Substrate-specific component MtsA of methionine-regulated ECF transporter; IMG reference gene:2503957708; PFAM: Protein of unknown function (DUF1393); hypothetical protein 1640090 10495719 Spico_1396 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411982.1 1639500 R 760011 CDS YP_004411983.1 330837342 10495720 1640681..1642840 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR011110; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; IMG reference gene:2503957709; PFAM: Regulator of chromosome condensation (RCC1) repeat; hypothetical protein 1642840 10495720 Spico_1397 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411983.1 1640681 D 760011 CDS YP_004411984.1 330837343 10495721 complement(1642910..1644850) 1 NC_015436.1 COGs: COG4211 ABC-type glucose/galactose transport system permease component; InterPro IPR001851; KEGG: tde:TDE2215 galactoside ABC transporter, permease, PFAM: ABC transporter permease; SPTR: galactoside ABC transporter, permease; IMG reference gene:2503957710; PFAM: Branched-chain amino acid transport system / permease component; monosaccharide ABC transporter membrane protein, CUT2 family 1644850 10495721 Spico_1398 Sphaerochaeta coccoides DSM 17374 monosaccharide ABC transporter membrane protein, CUT2 family YP_004411984.1 1642910 R 760011 CDS YP_004411985.1 330837344 10495722 complement(1644869..1646365) 1 NC_015436.1 COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: tde:TDE2216 galactoside ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Galactose/methyl galactoside import ATP-binding protein MglA; IMG reference gene:2503957711; PFAM: ABC transporter; monosaccharide ABC transporter ATP-binding protein, CUT2 family 1646365 10495722 Spico_1399 Sphaerochaeta coccoides DSM 17374 monosaccharide ABC transporter ATP-binding protein, CUT2 family YP_004411985.1 1644869 R 760011 CDS YP_004411986.1 330837345 10495723 complement(1646483..1647688) 1 NC_015436.1 COGs: COG1879 ABC-type sugar transport system periplasmic component; KEGG: tde:TDE2217 galactose/glucose-binding lipoprotein; SPTR: Galactose/glucose-binding lipoprotein; IMG reference gene:2503957712; monosaccharide ABC transporter substrate-binding protein, CUT2 family 1647688 10495723 Spico_1400 Sphaerochaeta coccoides DSM 17374 monosaccharide ABC transporter substrate-binding protein, CUT2 family YP_004411986.1 1646483 R 760011 CDS YP_004411987.1 330837346 10495724 1648036..1649742 1 NC_015436.1 COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR001789:IPR018060:IPR000005; KEGG: ccb:Clocel_3842 two component transcriptional regulator, AraC family; PFAM: Signal transduction response regulator, receiver domain; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; Signal transduction response regulator, receiver domain; SPTR: Two component transcriptional regulator, AraC family; IMG reference gene:2503957713; PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator 1649742 10495724 Spico_1401 Sphaerochaeta coccoides DSM 17374 AraC family transcriptional regulator YP_004411987.1 1648036 D 760011 CDS YP_004411988.1 330837347 10495725 1649735..1651513 1 NC_015436.1 COGs: COG2972 signal transduction protein with a C-terminal ATPase domain; InterPro IPR003660:IPR003594:IPR004010:IPR010559; KEGG: ccb:Clocel_3841 multi-sensor signal transduction histidine kinase; PFAM: Signal transduction histidine kinase, internal region; HAMP linker domain; Cache; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; HAMP linker domain; SPTR: Multi-sensor signal transduction histidine kinase; IMG reference gene:2503957714; PFAM: Histidine kinase; HAMP domain; Cache domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; multi-sensor signal transduction histidine kinase 1651513 10495725 Spico_1402 Sphaerochaeta coccoides DSM 17374 multi-sensor signal transduction histidine kinase YP_004411988.1 1649735 D 760011 CDS YP_004411989.1 330837348 10495726 1651510..1652541 1 NC_015436.1 COGs: COG1879 ABC-type sugar transport system periplasmic component; KEGG: cpy:Cphy_2251 periplasmic binding protein/LacI transcriptional regulator; SPTR: uncharacterized protein; IMG reference gene:2503957715; hypothetical protein 1652541 10495726 Spico_1403 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411989.1 1651510 D 760011 CDS YP_004411990.1 330837349 10495727 complement(1652545..1653567) 1 NC_015436.1 COGs: COG1879 ABC-type sugar transport system periplasmic component; KEGG: bbe:BBR47_06800 D-galactose ABC transporter substrate binding protein precursor; SPTR: D-galactose ABC transporter substrate binding protein; IMG reference gene:2503957716; monosaccharide ABC transporter substrate-binding protein, CUT2 family 1653567 10495727 Spico_1404 Sphaerochaeta coccoides DSM 17374 monosaccharide ABC transporter substrate-binding protein, CUT2 family YP_004411990.1 1652545 R 760011 CDS YP_004411991.1 330837350 10495728 1653945..1656488 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR011110:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Listeria/Bacterioides repeat; Two component regulator propeller; Regulator of chromosome condensation, RCC1; SPTR: Alpha-tubulin suppressor and related RCC1 domain-containing protein-like protein; IMG reference gene:2503957717; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; hypothetical protein 1656488 10495728 Spico_1405 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411991.1 1653945 D 760011 CDS YP_004411992.1 330837351 10495729 complement(1656799..1657428) 1 NC_015436.1 COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR010065:IPR000515; KEGG: dhd:Dhaf_1045 polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: uncharacterized protein; TIGRFAM: Amino acid ABC transporter, permease, 3-TM domain, His/Glu/Gln/Arg/opine family; IMG reference gene:2503957718; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family; amino acid ABC transporter permease 1657428 10495729 Spico_1406 Sphaerochaeta coccoides DSM 17374 amino acid ABC transporter permease YP_004411992.1 1656799 R 760011 CDS YP_004411993.1 330837352 10495730 complement(1657425..1658090) 1 NC_015436.1 COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR010065:IPR000515; KEGG: dsy:DSY4276 hypothetical protein; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: uncharacterized protein; TIGRFAM: Amino acid ABC transporter, permease, 3-TM domain, His/Glu/Gln/Arg/opine family; IMG reference gene:2503957719; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family; amino acid ABC transporter permease 1658090 10495730 Spico_1407 Sphaerochaeta coccoides DSM 17374 amino acid ABC transporter permease YP_004411993.1 1657425 R 760011 CDS YP_004411994.1 330837353 10495731 complement(1658093..1658902) 1 NC_015436.1 COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001638; KEGG: dhd:Dhaf_1043 extracellular solute-binding protein family 3; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; SPTR: uncharacterized protein; IMG reference gene:2503957720; PFAM: Bacterial extracellular solute-binding proteins, family 3; amino acid ABC transporter substrate-binding protein 1658902 10495731 Spico_1408 Sphaerochaeta coccoides DSM 17374 amino acid ABC transporter substrate-binding protein YP_004411994.1 1658093 R 760011 CDS YP_004411995.1 330837354 10495732 complement(1659099..1659845) 1 NC_015436.1 COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: toc:Toce_1570 amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Amino acid ABC transporter ATP-binding protein, PAAT family; IMG reference gene:2503957721; PFAM: ABC transporter; amino acid ABC transporter ATP-binding protein 1659845 10495732 Spico_1409 Sphaerochaeta coccoides DSM 17374 amino acid ABC transporter ATP-binding protein YP_004411995.1 1659099 R 760011 CDS YP_004411996.1 330837355 10495733 1660489..1660965 1 NC_015436.1 COGs: COG1854 LuxS protein involved in autoinducer AI2 synthesis; InterPro IPR003815; KEGG: bpb:bpr_I0033 S-ribosylhomocysteinase LuxS; PFAM: S-ribosylhomocysteinase (LuxS); PRIAM: S-ribosylhomocysteine lyase; SPTR: S-ribosylhomocysteinase LuxS; IMG reference gene:2503957722; PFAM: S-Ribosylhomocysteinase (LuxS); quorum-sensing autoinducer 2 (AI-2), LuxS 1660965 10495733 Spico_1410 Sphaerochaeta coccoides DSM 17374 quorum-sensing autoinducer 2 (AI-2), LuxS YP_004411996.1 1660489 D 760011 CDS YP_004411997.1 330837356 10495734 1660985..1661665 1 NC_015436.1 COGs: COG0775 Nucleoside phosphorylase; InterPro IPR010049:IPR000845; KEGG: ppy:PPE_03405 MTA/SAH nucleosidase (5'-methylthioadenosine nucleosidase); PFAM: Nucleoside phosphorylase domain; PRIAM: Adenosylhomocysteine nucleosidase; SPTR: MTA/SAH nucleosidase (5'-methylthioadenosine nucleosidase); TIGRFAM: MTA/SAH nucleosidase; IMG reference gene:2503957723; PFAM: Phosphorylase superfamily; TIGRFAM: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; MTA/SAH nucleosidase 1661665 10495734 Spico_1411 Sphaerochaeta coccoides DSM 17374 MTA/SAH nucleosidase YP_004411997.1 1660985 D 760011 CDS YP_004411998.1 330837357 10495735 1661680..1661943 1 NC_015436.1 KEGG: mxa:MXAN_2924 general secretion pathway protein E; IMG reference gene:2503957724; hypothetical protein 1661943 10495735 Spico_1412 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004411998.1 1661680 D 760011 CDS YP_004411999.1 330837358 10495736 1662000..1662923 1 NC_015436.1 COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: cac:CA_C0427 glycerol-3-phosphate ABC-transporter, permease component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503957725; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 1662923 10495736 Spico_1413 Sphaerochaeta coccoides DSM 17374 binding-protein-dependent transport system inner membrane protein YP_004411999.1 1662000 D 760011 CDS YP_004412000.1 330837359 10495737 1662920..1663771 1 NC_015436.1 COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: cac:CA_C0428 sugar permease; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503957726; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 1663771 10495737 Spico_1414 Sphaerochaeta coccoides DSM 17374 binding-protein-dependent transport system inner membrane protein YP_004412000.1 1662920 D 760011 CDS YP_004412001.1 330837360 10495738 1663795..1665180 1 NC_015436.1 COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: apr:Apre_0061 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein family 1; IMG reference gene:2503957727; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein 1665180 10495738 Spico_1415 Sphaerochaeta coccoides DSM 17374 ABC transporter substrate-binding protein YP_004412001.1 1663795 D 760011 CDS YP_004412002.1 330837361 10495739 1665183..1666070 1 NC_015436.1 COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: toc:Toce_0893 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Xylose isomerase domain protein TIM barrel; IMG reference gene:2503957728; PFAM: Xylose isomerase-like TIM barrel; xylose isomerase domain-containing protein 1666070 10495739 Spico_1416 Sphaerochaeta coccoides DSM 17374 xylose isomerase domain-containing protein YP_004412002.1 1665183 D 760011 CDS YP_004412003.1 330837362 10495740 complement(1666067..1666549) 1 NC_015436.1 COGs: COG0789 transcriptional regulator protein; InterPro IPR000551; KEGG: seq:SZO_16670 MerR family regulatory protein; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; SPTR: MerR family regulatory protein; IMG reference gene:2503957729; PFAM: MerR family regulatory protein; MerR family transcriptional regulator 1666549 10495740 Spico_1417 Sphaerochaeta coccoides DSM 17374 MerR family transcriptional regulator YP_004412003.1 1666067 R 760011 CDS YP_004412004.1 330837363 10495741 1666650..1667336 1 NC_015436.1 COGs: COG2003 DNA repair protein; InterPro IPR001405; KEGG: ssm:Spirs_3489 DNA repair protein RadC; PFAM: Uncharacterised protein family UPF0758; SPTR: DNA repair protein; TIGRFAM: Uncharacterised protein family UPF0758; IMG reference gene:2503957730; PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc; DNA repair protein RadC 1667336 10495741 Spico_1418 Sphaerochaeta coccoides DSM 17374 DNA repair protein RadC YP_004412004.1 1666650 D 760011 CDS YP_004412005.1 330837364 10495742 complement(1667306..1668364) 1 NC_015436.1 COGs: COG0053 Co/Zn/Cd cation transporter; InterPro IPR002524; KEGG: cbf:CLI_1359 cation efflux family protein; PFAM: Cation efflux protein; SPTR: Cation diffusion facilitator family transporter; TIGRFAM: Cation efflux protein; IMG reference gene:2503957731; PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 1668364 10495742 Spico_1419 Sphaerochaeta coccoides DSM 17374 cation diffusion facilitator family transporter YP_004412005.1 1667306 R 760011 CDS YP_004412006.1 330837365 10495743 complement(1668327..1668938) 1 NC_015436.1 COGs: COG0139 Phosphoribosyl-AMP cyclohydrolase; HAMAP: Phosphoribosyl-ATP pyrophosphohydrolase; Histidine biosynthesis bifunctional protein HisIE; InterPro IPR008179:IPR002496:IPR021130:IPR023019; KEGG: cpi:Cpin_1832 phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase-like; Phosphoribosyl-AMP cyclohydrolase; SPTR: Phosphoribosyl-ATP diphosphatase; TIGRFAM: Phosphoribosyl-ATP pyrophosphohydrolase; IMG reference gene:2503957732; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-AMP cyclohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-ATP pyrophosphatase 1668938 10495743 Spico_1420 Sphaerochaeta coccoides DSM 17374 Phosphoribosyl-ATP pyrophosphatase YP_004412006.1 1668327 R 760011 CDS YP_004412007.1 330837366 10495744 complement(1668950..1669741) 1 NC_015436.1 COGs: COG0107 Imidazoleglycerol-phosphate synthase; HAMAP: Histidine biosynthesis, HisF; InterPro IPR004651:IPR006062; KEGG: cpi:Cpin_1831 imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: Histidine biosynthesis; PRIAM:1-(5-phosphoribosyl)-5-((5-phosphoribosylamin o)methylideneamino)imidazole-4-carboxamideisomerase; SPTR: Imidazole glycerol phosphate synthase subunit hisF; TIGRFAM: Histidine biosynthesis, HisF; IMG reference gene:2503957733; PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; imidazole glycerol phosphate synthase subunit HisF 1669741 10495744 Spico_1421 Sphaerochaeta coccoides DSM 17374 imidazole glycerol phosphate synthase subunit HisF YP_004412007.1 1668950 R 760011 CDS YP_004412008.1 330837367 10495745 complement(1669743..1670492) 1 NC_015436.1 COGs: COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; HAMAP: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; InterPro IPR006062:IPR023016; KEGG: chu:CHU_1272 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; PFAM: Histidine biosynthesis; PRIAM:1-(5-phosphoribosyl)-5-((5-phosphoribosylamin o)methylideneamino)imidazole-4-carboxamideisomerase; SPTR:1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; IMG reference gene:2503957734; PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase 1670492 10495745 Spico_1422 Sphaerochaeta coccoides DSM 17374 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase YP_004412008.1 1669743 R 760011 CDS YP_004412009.1 330837368 10495746 complement(1670483..1671094) 1 NC_015436.1 COGs: COG0118 Glutamine amidotransferase; HAMAP: Imidazole glycerol phosphate synthase, subunit H; InterPro IPR010139:IPR000991; KEGG: dfe:Dfer_4237 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: Glutamine amidotransferase class-I, C-terminal; SPTR: Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; TIGRFAM: Imidazole glycerol phosphate synthase, subunit H; IMG reference gene:2503957735; PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; imidazole glycerol phosphate synthase subunit HisH 1671094 10495746 Spico_1423 Sphaerochaeta coccoides DSM 17374 imidazole glycerol phosphate synthase subunit HisH YP_004412009.1 1670483 R 760011 CDS YP_004412010.1 330837369 10495747 complement(1671118..1672278) 1 NC_015436.1 COGs: COG0131 Imidazoleglycerol-phosphate dehydratase; HAMAP: Imidazoleglycerol-phosphate dehydratase; InterPro IPR006543:IPR006549:IPR000807; KEGG: chu:CHU_1270 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; PFAM: Imidazoleglycerol-phosphate dehydratase; PRIAM: Histidinol-phosphatase; SPTR: Bifunctional protein: histidinol-phosphatase; imidazoleglycerol-phosphate dehydratase; TIGRFAM: Histidinol-phosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; IMG reference gene:2503957736; PFAM: Imidazoleglycerol-phosphate dehydratase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; histidinol-phosphate phosphatase domain; histidinol-phosphatase; imidazoleglycerol-phosphate dehydratase 1672278 10495747 Spico_1424 Sphaerochaeta coccoides DSM 17374 imidazoleglycerol-phosphate dehydratase YP_004412010.1 1671118 R 760011 CDS YP_004412011.1 330837370 10495748 complement(1672278..1673435) 1 NC_015436.1 COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; HAMAP: Histidinol-phosphate aminotransferase; InterPro IPR005861:IPR004839; KEGG: pdi:BDI_0968 histidinol-phosphate aminotransferase; PFAM: Aminotransferase, class I/classII; PRIAM: Histidinol-phosphate transaminase; SPTR: Histidinol-phosphate aminotransferase; TIGRFAM: Histidinol-phosphate aminotransferase; IMG reference gene:2503957737; PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase 1673435 10495748 Spico_1425 Sphaerochaeta coccoides DSM 17374 histidinol-phosphate aminotransferase YP_004412011.1 1672278 R 760011 CDS YP_004412012.1 330837371 10495749 complement(1673432..1674787) 1 NC_015436.1 COGs: COG0141 Histidinol dehydrogenase; HAMAP: Histidinol dehydrogenase, prokaryotic-type; InterPro IPR012131; KEGG: pdi:BDI_0967 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase, prokaryotic-type; PRIAM: Histidinol dehydrogenase; SPTR: Histidinol dehydrogenase; TIGRFAM: Histidinol dehydrogenase, prokaryotic-type; IMG reference gene:2503957738; PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; histidinol dehydrogenase 1674787 10495749 Spico_1426 Sphaerochaeta coccoides DSM 17374 histidinol dehydrogenase YP_004412012.1 1673432 R 760011 CDS YP_004412013.1 330837372 10495750 complement(1674791..1675669) 1 NC_015436.1 COGs: COG0040 ATP phosphoribosyltransferase; HAMAP: Histidine biosynthesis HisG, ATP phosphoribosyltransferase, subgroup; InterPro IPR013820:IPR013115:IPR020621; KEGG: dfe:Dfer_1142 ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase, catalytic domain; Histidine biosynthesis HisG, C-terminal; PRIAM: ATP phosphoribosyltransferase; SPTR: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase, catalytic domain; Histidine biosynthesis HisG, C-terminal; IMG reference gene:2503957739; PFAM: HisG, C-terminal domain; ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase, C-terminal domain; ATP phosphoribosyltransferase; ATP phosphoribosyltransferase 1675669 10495750 Spico_1427 Sphaerochaeta coccoides DSM 17374 ATP phosphoribosyltransferase YP_004412013.1 1674791 R 760011 CDS YP_004412014.1 330837373 10495751 complement(1675907..1676503) 1 NC_015436.1 KEGG: sti:Sthe_2657 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957740; hypothetical protein 1676503 10495751 Spico_1428 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412014.1 1675907 R 760011 CDS YP_004412015.1 330837374 10495752 1676612..1677319 1 NC_015436.1 COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR011951:IPR006439:IPR005834; KEGG: rcu:RCOM_2074390 5'-nucleotidase yjjG, PFAM: Haloacid dehalogenase-like hydrolase; PRIAM: 5'-nucleotidase; SPTR: 5'-nucleotidase yjjG, ; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB; HAD-superfamily hydrolase, subfamily IA, variant 1; IMG reference gene:2503957741; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; HAD superfamily (subfamily IA) hydrolase, TIGR02254; HAD-superfamily hydrolase 1677319 10495752 Spico_1429 Sphaerochaeta coccoides DSM 17374 HAD-superfamily hydrolase YP_004412015.1 1676612 D 760011 CDS YP_004412016.1 330837375 10495753 complement(1677329..1678114) 1 NC_015436.1 COGs: COG0545 FKBP-type peptidyl-prolyl cis-trans isomerase 1; InterPro IPR000774:IPR001179; KEGG: dol:Dole_1577 peptidylprolyl isomerase FKBP-type; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal; Peptidyl-prolyl cis-trans isomerase, FKBP-type; SPTR: Peptidyl-prolyl cis-trans isomerase; IMG reference gene:2503957742; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase; FKBP-type peptidylprolyl isomerase 1678114 10495753 Spico_1430 Sphaerochaeta coccoides DSM 17374 FKBP-type peptidylprolyl isomerase YP_004412016.1 1677329 R 760011 CDS YP_004412017.1 330837376 10495754 1678546..1679847 1 NC_015436.1 COGs: COG0128 5-enolpyruvylshikimate-3-phosphate synthase; HAMAP: 3-phosphoshikimate 1-carboxyvinyltransferase; InterPro IPR006264:IPR001986; KEGG: ssm:Spirs_3939 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: Enolpyruvate transferase domain; PRIAM: 3-phosphoshikimate 1-carboxyvinyltransferase; SPTR: 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; IMG reference gene:2503957743; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; 3-phosphoshikimate 1-carboxyvinyltransferase 1679847 10495754 Spico_1431 Sphaerochaeta coccoides DSM 17374 3-phosphoshikimate 1-carboxyvinyltransferase YP_004412017.1 1678546 D 760011 CDS YP_004412018.1 330837377 10495755 1679834..1680877 1 NC_015436.1 COGs: COG2008 Threonine aldolase; InterPro IPR001597; KEGG: ssm:Spirs_3940 threonine aldolase; PFAM: Aromatic amino acid beta-eliminating lyase/threonine aldolase; PRIAM: Threonine aldolase; SPTR: Threonine aldolase; IMG reference gene:2503957744; PFAM: Beta-eliminating lyase; threonine aldolase 1680877 10495755 Spico_1432 Sphaerochaeta coccoides DSM 17374 threonine aldolase YP_004412018.1 1679834 D 760011 CDS YP_004412019.1 330837378 10495756 1680874..1682139 1 NC_015436.1 COGs: COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities; InterPro IPR004839; KEGG: cbi:CLJ_B1515 aminotransferase, classes I and II; PFAM: Aminotransferase, class I/classII; PRIAM: Cystathionine beta-lyase; SPTR: Aminotransferase, classes I and II; IMG reference gene:2503957745; PFAM: Aminotransferase class I and II; cystathionine beta-lyase 1682139 10495756 Spico_1433 Sphaerochaeta coccoides DSM 17374 cystathionine beta-lyase YP_004412019.1 1680874 D 760011 CDS YP_004412020.1 330837379 10495757 complement(1682186..1685842) 1 NC_015436.1 COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR000212; KEGG: ssm:Spirs_3944 UvrD/REP helicase; PFAM: DNA helicase, UvrD/REP type; SPTR: ATP-dependent DNA helicase, UvrD/Rep family; IMG reference gene:2503957746; PFAM: UvrD/REP helicase; UvrD/REP helicase 1685842 10495757 Spico_1434 Sphaerochaeta coccoides DSM 17374 UvrD/REP helicase YP_004412020.1 1682186 R 760011 CDS YP_004412021.1 330837380 10495758 complement(1685839..1688880) 1 NC_015436.1 KEGG: ssm:Spirs_3945 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957747; hypothetical protein 1688880 10495758 Spico_1435 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412021.1 1685839 R 760011 CDS YP_004412022.1 330837381 10495759 1688919..1689899 1 NC_015436.1 InterPro IPR003675; KEGG: rrs:RoseRS_4016 abortive infection protein; PFAM: Abortive infection protein; SPTR: Abortive infection protein; IMG reference gene:2503957748; PFAM: CAAX amino terminal protease; abortive infection protein 1689899 10495759 Spico_1436 Sphaerochaeta coccoides DSM 17374 abortive infection protein YP_004412022.1 1688919 D 760011 CDS YP_004412023.1 330837382 10495760 1689947..1691110 1 NC_015436.1 COGs: COG1864 DNA/RNA endonuclease G NUC1; InterPro IPR001604:IPR020821; KEGG: cts:Ctha_1807 DNA/RNA non-specific endonuclease; PFAM: DNA/RNA non-specific endonuclease; SMART: DNA/RNA non-specific endonuclease; Extracellular Endonuclease, subunit A; SPTR: DNA/RNA non-specific endonuclease; IMG reference gene:2503957749; PFAM: DNA/RNA non-specific endonuclease; DNA/RNA non-specific endonuclease 1691110 10495760 Spico_1437 Sphaerochaeta coccoides DSM 17374 DNA/RNA non-specific endonuclease YP_004412023.1 1689947 D 760011 CDS YP_004412024.1 330837383 10495761 1691238..1692578 1 NC_015436.1 COGs: COG0371 Glycerol dehydrogenase; InterPro IPR002658; KEGG: bcv:Bcav_1503 glycerol-1-phosphate dehydrogenase (NAD(P)(+)); PFAM: 3-dehydroquinate synthase AroB; PRIAM: Glycerol-1-phosphate dehydrogenase (NAD(P)(+)); SPTR: Glycerol-1-phosphate dehydrogenase (NAD(P)(+)); IMG reference gene:2503957750; PFAM: 3-dehydroquinate synthase; Glycerol-1-phosphate dehydrogenase (NAD(P)(+)) 1692578 10495761 Spico_1438 Sphaerochaeta coccoides DSM 17374 Glycerol-1-phosphate dehydrogenase (NAD(P)(+)) YP_004412024.1 1691238 D 760011 CDS YP_004412025.1 330837384 10495763 1693068..1693217 1 NC_015436.1 IMG reference gene:2503957752; hypothetical protein 1693217 10495763 Spico_1439 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412025.1 1693068 D 760011 CDS YP_004412026.1 330837385 10495764 1693579..1699827 1 NC_015436.1 KEGG: gdj:Gdia_2446 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957753; hypothetical protein 1699827 10495764 Spico_1440 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412026.1 1693579 D 760011 CDS YP_004412027.1 330837386 10495765 1700098..1700373 1 NC_015436.1 KEGG: osa:4332786 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957754; hypothetical protein 1700373 10495765 Spico_1441 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412027.1 1700098 D 760011 CDS YP_004412028.1 330837387 10495766 complement(1700528..1701067) 1 NC_015436.1 COGs: COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I C-terminal domain; InterPro IPR004647; KEGG: dly:Dehly_0361 hydro-lyase tartrate/fumarate subfamily subunit alpha; PFAM: Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain; PRIAM: Fumarate hydratase; SPTR: Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; TIGRFAM: Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain; IMG reference gene:2503957755; PFAM: Fumarase C-terminus; TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit beta 1701067 10495766 Spico_1442 Sphaerochaeta coccoides DSM 17374 Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit beta YP_004412028.1 1700528 R 760011 CDS YP_004412029.1 330837388 10495767 complement(1701060..1701986) 1 NC_015436.1 COGs: COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I N-terminal domain; InterPro IPR004646; KEGG: dds:Ddes_1528 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain; PRIAM: Fumarate hydratase; SPTR: Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha region; TIGRFAM: Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain; IMG reference gene:2503957756; PFAM: Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha 1701986 10495767 Spico_1443 Sphaerochaeta coccoides DSM 17374 Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha YP_004412029.1 1701060 R 760011 CDS YP_004412030.1 330837389 10495768 complement(1701986..1702546) 1 NC_015436.1 InterPro IPR006976; KEGG: hne:HNE_2912 hypothetical protein; PFAM: VanZ-like; SPTR: membrane protein; IMG reference gene:2503957757; PFAM: VanZ like family; VanZ family protein 1702546 10495768 Spico_1444 Sphaerochaeta coccoides DSM 17374 VanZ family protein YP_004412030.1 1701986 R 760011 CDS YP_004412031.1 330837390 10495769 complement(1702521..1703522) 1 NC_015436.1 COGs: COG1242 Fe-S oxidoreductase; InterPro IPR006638:IPR007197; KEGG: sta:STHERM_c02000 radical SAM protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Radical SAM protein; IMG reference gene:2503957758; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM protein, TIGR01212 family; radical SAM protein 1703522 10495769 Spico_1445 Sphaerochaeta coccoides DSM 17374 radical SAM protein YP_004412031.1 1702521 R 760011 CDS YP_004412032.1 330837391 10495770 complement(1703522..1705957) 1 NC_015436.1 COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641; KEGG: ssm:Spirs_3807 patatin; PFAM: Patatin/Phospholipase A2-related; SPTR: membrane protein; IMG reference gene:2503957759; PFAM: Patatin-like phospholipase; patatin 1705957 10495770 Spico_1446 Sphaerochaeta coccoides DSM 17374 patatin YP_004412032.1 1703522 R 760011 CDS YP_004412033.1 330837392 10495771 complement(1705959..1707008) 1 NC_015436.1 COGs: COG0223 Methionyl-tRNA formyltransferase; HAMAP: Methionyl-tRNA formyltransferase; InterPro IPR005794:IPR002376:IPR005793; KEGG: ssm:Spirs_1655 methionyl-tRNA formyltransferase; PFAM: Formyl transferase, C-terminal; Formyl transferase, N-terminal; PRIAM: Methionyl-tRNA formyltransferase; SPTR: Methionyl-tRNA formyltransferase; TIGRFAM: Methionyl-tRNA formyltransferase; IMG reference gene:2503957760; PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase; Methionyl-tRNA formyltransferase 1707008 10495771 Spico_1447 Sphaerochaeta coccoides DSM 17374 Methionyl-tRNA formyltransferase YP_004412033.1 1705959 R 760011 CDS YP_004412034.1 330837393 10495772 complement(1706965..1707468) 1 NC_015436.1 COGs: COG0242 N-formylmethionyl-tRNA deformylase; HAMAP: Formylmethionine deformylase; InterPro IPR000181; KEGG: ssm:Spirs_1654 peptide deformylase; PFAM: Formylmethionine deformylase; SPTR: Peptide deformylase; TIGRFAM: Formylmethionine deformylase; IMG reference gene:2503957761; PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase; peptide deformylase 1707468 10495772 Spico_1448 Sphaerochaeta coccoides DSM 17374 peptide deformylase YP_004412034.1 1706965 R 760011 CDS YP_004412035.1 330837394 10495773 1707850..1710015 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR002951:IPR011110:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; Atrophin-like; Two component regulator propeller; SPTR: Regulator of chromosome condensation, RCC1; IMG reference gene:2503957762; PFAM: Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 1710015 10495773 Spico_1449 Sphaerochaeta coccoides DSM 17374 chromosome condensation regulator RCC1 YP_004412035.1 1707850 D 760011 CDS YP_004412036.1 330837395 10495775 complement(1710398..1712401) 1 NC_015436.1 COGs: COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase; InterPro IPR014001:IPR001650:IPR005259:IPR011545; KEGG: ssm:Spirs_1653 primosomal protein N'; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: Primosomal protein N; TIGRFAM: Primosomal protein n; IMG reference gene:2503957764; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: primosomal protein N'; primosomal protein N' 1712401 10495775 Spico_1451 Sphaerochaeta coccoides DSM 17374 primosomal protein N' YP_004412036.1 1710398 R 760011 CDS YP_004412037.1 330837396 10495776 complement(1712398..1713267) 1 NC_015436.1 COGs: COG1573 Uracil-DNA glycosylase; InterPro IPR005273:IPR005122; KEGG: ssm:Spirs_1652 phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase-like; SPTR: uncharacterized protein; TIGRFAM: Phage SPO1 DNA polymerase-related protein; IMG reference gene:2503957765; PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4; phage SPO1 DNA polymerase-related protein 1713267 10495776 Spico_1452 Sphaerochaeta coccoides DSM 17374 phage SPO1 DNA polymerase-related protein YP_004412037.1 1712398 R 760011 CDS YP_004412038.1 330837397 10495777 complement(1713254..1714153) 1 NC_015436.1 COGs: COG0101 Pseudouridylate synthase; HAMAP: Pseudouridine synthase I, TruA; InterPro IPR001406:IPR020097; KEGG: cce:Ccel_0793 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; PRIAM: tRNA-pseudouridine synthase I; SPTR: tRNA pseudouridine synthase A; TIGRFAM: Pseudouridine synthase I, TruA; IMG reference gene:2503957766; PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I; tRNA pseudouridine synthase A 1714153 10495777 Spico_1453 Sphaerochaeta coccoides DSM 17374 tRNA pseudouridine synthase A YP_004412038.1 1713254 R 760011 CDS YP_004412039.1 330837398 10495778 complement(1714140..1714541) 1 NC_015436.1 COGs: COG0736 Phosphopantetheinyl transferase (holo-ACP synthase); HAMAP: Holo-[acyl carrier protein] synthase; InterPro IPR002582:IPR004568:IPR008278; KEGG: sta:STHERM_c18350 holo-(acyl-carrier-protein) synthase; PFAM: 4'-phosphopantetheinyl transferase; SPTR: Holo-(Acyl-carrier-protein) synthase; TIGRFAM: Holo-[acyl carrier protein] synthase; Phosphopantethiene-protein transferase; IMG reference gene:2503957767; PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantethiene--protein transferase domain; holo-[acyl-carrier-protein] synthase; holo-ACP synthase 1714541 10495778 Spico_1454 Sphaerochaeta coccoides DSM 17374 holo-ACP synthase YP_004412039.1 1714140 R 760011 CDS YP_004412040.1 330837399 10495779 complement(1714543..1714962) 1 NC_015436.1 InterPro IPR012505; KEGG: ssm:Spirs_1648 YbbR family protein; PFAM: YbbR-like; SPTR: Membrane associated protein; IMG reference gene:2503957768; PFAM: YbbR-like protein; hypothetical protein 1714962 10495779 Spico_1455 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412040.1 1714543 R 760011 CDS YP_004412041.1 330837400 10495780 complement(1714949..1715767) 1 NC_015436.1 COGs: COG1624 conserved hypothetical protein; InterPro IPR014046:IPR003390; KEGG: ssm:Spirs_1647 protein of unknown function DUF147; PFAM: DNA integrity scanning protein, DisA, N-terminal; SPTR: uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP00159; IMG reference gene:2503957769; PFAM: DisA bacterial checkpoint controller nucleotide-binding; TIGRFAM: TIGR00159 family protein; hypothetical protein 1715767 10495780 Spico_1456 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412041.1 1714949 R 760011 CDS YP_004412042.1 330837401 10495781 complement(1715861..1718893) 1 NC_015436.1 COGs: COG1026 Zn-dependent peptidase insulinase-like; InterPro IPR011765:IPR007863:IPR013578; KEGG: ssm:Spirs_3660 peptidase M16C associated domain protein; PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; Peptidase M16C associated; SPTR: Presequence protease 1; IMG reference gene:2503957770; PFAM: Peptidase M16C associated; Peptidase M16 inactive domain; Insulinase (Peptidase M16); peptidase M16 domain-containing protein 1718893 10495781 Spico_1457 Sphaerochaeta coccoides DSM 17374 peptidase M16 domain-containing protein YP_004412042.1 1715861 R 760011 CDS YP_004412043.1 330837402 10495782 1719038..1719790 1 NC_015436.1 COGs: COG0584 Glycerophosphoryl diester phosphodiesterase; InterPro IPR004129; KEGG: ssm:Spirs_3903 glycerophosphoryl diester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase; SPTR: Glycerophosphoryl diester phosphodiesterase, ; IMG reference gene:2503957771; PFAM: Glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 1719790 10495782 Spico_1458 Sphaerochaeta coccoides DSM 17374 glycerophosphoryl diester phosphodiesterase YP_004412043.1 1719038 D 760011 CDS YP_004412044.1 330837403 10495783 complement(1719828..1721246) 1 NC_015436.1 KEGG: tde:TDE0730 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957772; hypothetical protein 1721246 10495783 Spico_1459 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412044.1 1719828 R 760011 CDS YP_004412045.1 330837404 10495784 complement(1721260..1722384) 1 NC_015436.1 KEGG: yen:YE4032 hypothetical protein; SPTR: Cell envelope proteinase; IMG reference gene:2503957773; hypothetical protein 1722384 10495784 Spico_1460 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412045.1 1721260 R 760011 CDS YP_004412046.1 330837405 10495785 complement(1722386..1723633) 1 NC_015436.1 COGs: COG2195 Di- and tripeptidase; InterPro IPR010161:IPR002933:IPR011650; KEGG: ssm:Spirs_3909 peptidase T; PFAM: Peptidase M20, dimerisation; Peptidase M20; PRIAM: Tripeptide aminopeptidase; SPTR: Peptidase T; TIGRFAM: Peptidase M20B, tripeptide aminopeptidase; IMG reference gene:2503957774; PFAM: Peptidase M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: peptidase T; peptidase T 1723633 10495785 Spico_1461 Sphaerochaeta coccoides DSM 17374 peptidase T YP_004412046.1 1722386 R 760011 CDS YP_004412047.1 330837406 10495786 complement(1723738..1724607) 1 NC_015436.1 KEGG: ere:EUBREC_3205 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957775; hypothetical protein 1724607 10495786 Spico_1462 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412047.1 1723738 R 760011 CDS YP_004412048.1 330837407 10495787 complement(1724655..1725188) 1 NC_015436.1 KEGG: ctt:CtCNB1_3098 TRAP dicarboxylate transporter, DctM subunit; SPTR: TRAP dicarboxylate transporter, DctM subunit; IMG reference gene:2503957776; hypothetical protein 1725188 10495787 Spico_1463 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412048.1 1724655 R 760011 CDS YP_004412049.1 330837408 10495788 1725571..1727799 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR011110:IPR000408; KEGG: aeh:Mlg_2688 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; Two component regulator propeller; SPTR: uncharacterized protein; IMG reference gene:2503957777; PFAM: Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 1727799 10495788 Spico_1464 Sphaerochaeta coccoides DSM 17374 chromosome condensation regulator RCC1 YP_004412049.1 1725571 D 760011 CDS YP_004412050.1 330837409 10495789 complement(1727884..1728387) 1 NC_015436.1 KEGG: isc:IscW_ISCW015120 GTP-binding protein, SPTR: GTP-binding protein, ; IMG reference gene:2503957778; hypothetical protein 1728387 10495789 Spico_1465 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412050.1 1727884 R 760011 CDS YP_004412051.1 330837410 10495790 1728512..1730578 1 NC_015436.1 KEGG: hoh:Hoch_6421 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957779; hypothetical protein 1730578 10495790 Spico_1466 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412051.1 1728512 D 760011 CDS YP_004412052.1 330837411 10495791 complement(1730924..1731028) 1 NC_015436.1 IMG reference gene:2503957780; hypothetical protein 1731028 10495791 Spico_1467 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412052.1 1730924 R 760011 CDS YP_004412053.1 330837412 10495792 1731495..1731710 1 NC_015436.1 KEGG: ele:Elen_0127 DNA binding domain protein, excisionase; SPTR: DNA binding domain protein, excisionase; IMG reference gene:2503957781; DNA binding domain-containing protein, excisionase 1731710 10495792 Spico_1468 Sphaerochaeta coccoides DSM 17374 DNA binding domain-containing protein, excisionase YP_004412053.1 1731495 D 760011 CDS YP_004412054.1 330837413 10495793 complement(1732100..1732372) 1 NC_015436.1 KEGG: mav:MAV_4833 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957782; hypothetical protein 1732372 10495793 Spico_1469 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412054.1 1732100 R 760011 CDS YP_004412055.1 330837414 10495794 complement(1732369..1732626) 1 NC_015436.1 KEGG: mka:MK1527 formylmethanofuran dehydrogenase subunit B, selenocysteine containing; SPTR: ferrichrome transport ATP-binding protein FhuC; IMG reference gene:2503957783; hypothetical protein 1732626 10495794 Spico_1470 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412055.1 1732369 R 760011 CDS YP_004412056.1 330837415 10495795 1733262..1733900 1 NC_015436.1 COGs: COG2344 AT-rich DNA-binding protein; HAMAP: Transcriptional repressor, redox-sensing, Rex; InterPro IPR003781:IPR009718:IPR022876; KEGG: ssm:Spirs_3692 CoA-binding domain protein; PFAM: CoA-binding; Rex DNA-binding, C-terminal; SMART: CoA-binding; SPTR: Redox-sensing transcriptional repressor rex; IMG reference gene:2503957784; PFAM: CoA binding domain; DNA-binding protein N-terminus; redox-sensing transcriptional repressor rex 1733900 10495795 Spico_1471 Sphaerochaeta coccoides DSM 17374 redox-sensing transcriptional repressor rex YP_004412056.1 1733262 D 760011 CDS YP_004412057.1 330837416 10495796 complement(1733990..1734955) 1 NC_015436.1 COGs: COG1897 Homoserine trans-succinylase; HAMAP: Homoserine O-succinyltransferase; InterPro IPR005697; KEGG: ttm:Tthe_0712 homoserine O-succinyltransferase; PFAM: Homoserine O-succinyltransferase; PRIAM: Homoserine O-succinyltransferase; SPTR: Homoserine O-succinyltransferase; TIGRFAM: Homoserine O-succinyltransferase; IMG reference gene:2503957785; PFAM: Homoserine O-succinyltransferase; TIGRFAM: homoserine O-succinyltransferase; homoserine O-succinyltransferase 1734955 10495796 Spico_1472 Sphaerochaeta coccoides DSM 17374 homoserine O-succinyltransferase YP_004412057.1 1733990 R 760011 CDS YP_004412058.1 330837417 10495797 complement(1735040..1736338) 1 NC_015436.1 COGs: COG2873 O-acetylhomoserine sulfhydrylase; InterPro IPR006235:IPR000277; KEGG: cpy:Cphy_0010 O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; PRIAM: Cysteine synthase; SPTR: uncharacterized protein; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; IMG reference gene:2503957786; PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase; O-acetylhomoserine sulfhydrolase 1736338 10495797 Spico_1473 Sphaerochaeta coccoides DSM 17374 O-acetylhomoserine sulfhydrolase YP_004412058.1 1735040 R 760011 CDS YP_004412059.1 330837418 10495798 complement(1736789..1737907) 1 NC_015436.1 InterPro IPR005135; KEGG: ssm:Spirs_3694 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase; IMG reference gene:2503957787; PFAM: Endonuclease/Exonuclease/phosphatase; hypothetical protein 1737907 10495798 Spico_1474 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412059.1 1736789 R 760011 CDS YP_004412060.1 330837419 10495799 complement(1737973..1740195) 1 NC_015436.1 KEGG: sta:STHERM_c14020 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957788; hypothetical protein 1740195 10495799 Spico_1475 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412060.1 1737973 R 760011 CDS YP_004412061.1 330837420 10495800 complement(1740234..1740974) 1 NC_015436.1 COGs: COG0740 Protease subunit of ATP-dependent Clp protease; HAMAP: Peptidase S14, ClpP; InterPro IPR001907; KEGG: sta:STHERM_c05540 hypothetical protein; PFAM: Peptidase S14, ClpP; PRIAM: Endopeptidase Clp; SPTR: ATP-dependent Clp protease proteolytic subunit; IMG reference gene:2503957789; PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; ATP-dependent Clp protease proteolytic subunit 1740974 10495800 Spico_1476 Sphaerochaeta coccoides DSM 17374 ATP-dependent Clp protease proteolytic subunit YP_004412061.1 1740234 R 760011 CDS YP_004412062.1 330837421 10495801 complement(1741023..1742822) 1 NC_015436.1 KEGG: tde:TDE1234 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957790; hypothetical protein 1742822 10495801 Spico_1477 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412062.1 1741023 R 760011 CDS YP_004412063.1 330837422 10495802 complement(1742891..1744666) 1 NC_015436.1 KEGG: tde:TDE1234 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957791; hypothetical protein 1744666 10495802 Spico_1478 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412063.1 1742891 R 760011 CDS YP_004412064.1 330837423 10495803 complement(1745018..1746808) 1 NC_015436.1 KEGG: tde:TDE1234 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957792; hypothetical protein 1746808 10495803 Spico_1479 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412064.1 1745018 R 760011 CDS YP_004412065.1 330837424 10495804 complement(1747007..1747696) 1 NC_015436.1 COGs: COG1285 membrane protein; InterPro IPR003416; KEGG: snb:SP670_2012 MgtC/SapB transporter; PFAM: MgtC/SapB transporter; SPTR: MgtC/SapB transporter; IMG reference gene:2503957793; PFAM: MgtC family; MgtC/SapB transporter 1747696 10495804 Spico_1480 Sphaerochaeta coccoides DSM 17374 MgtC/SapB transporter YP_004412065.1 1747007 R 760011 CDS YP_004412066.1 330837425 10495805 1747914..1748798 1 NC_015436.1 COGs: COG1159 GTPase; HAMAP: GTP-binding protein Era; InterPro IPR005225:IPR005662:IPR002917:IPR004044; KEGG: ssm:Spirs_3698 GTP-binding protein Era; PFAM: GTP-binding protein, HSR1-related; K Homology, type 2; SPTR: GTP-binding protein; TIGRFAM: GTP-binding protein Era; Small GTP-binding protein; IMG reference gene:2503957794; PFAM: KH domain; GTPase of unknown function; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain; GTP-binding protein Era 1748798 10495805 Spico_1481 Sphaerochaeta coccoides DSM 17374 GTP-binding protein Era YP_004412066.1 1747914 D 760011 CDS YP_004412067.1 330837426 10495806 complement(1748811..1750001) 1 NC_015436.1 COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: cwo:Cwoe_1260 ROK family protein; PFAM: ROK; SPTR: ROK family protein; IMG reference gene:2503957795; PFAM: ROK family; ROK family protein 1750001 10495806 Spico_1482 Sphaerochaeta coccoides DSM 17374 ROK family protein YP_004412067.1 1748811 R 760011 CDS YP_004412068.1 330837427 10495807 complement(1750145..1751266) 1 NC_015436.1 InterPro IPR004300; KEGG: pst:PSPTO_4203 polysaccharide deacetylase; PFAM: Glycoside hydrolase, family 57, N-terminal; SPTR: Polysaccharide deacetylase; IMG reference gene:2503957796; PFAM: Glycosyl hydrolase 57; glycoside hydrolase 57 1751266 10495807 Spico_1483 Sphaerochaeta coccoides DSM 17374 glycoside hydrolase 57 YP_004412068.1 1750145 R 760011 CDS YP_004412069.1 330837428 10495808 complement(1751622..1752560) 1 NC_015436.1 COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: tle:Tlet_1114 amidohydrolase 2; PFAM: Amidohydrolase 2; SPTR: Amidohydrolase 2; IMG reference gene:2503957797; PFAM: Amidohydrolase; amidohydrolase 1752560 10495808 Spico_1484 Sphaerochaeta coccoides DSM 17374 amidohydrolase YP_004412069.1 1751622 R 760011 CDS YP_004412070.1 330837429 10495809 complement(1752606..1753421) 1 NC_015436.1 COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: atu:Atu4652 ABC transporter, membrane spanning protein (sugar); PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: ABC transporter, membrane spanning protein (Sugar); IMG reference gene:2503957798; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 2 1753421 10495809 Spico_1485 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter membrane protein 2 YP_004412070.1 1752606 R 760011 CDS YP_004412071.1 330837430 10495810 complement(1753408..1754316) 1 NC_015436.1 COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: atu:Atu4653 ABC transporter, membrane spanning protein (sugar); PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: ABC transporter, membrane spanning protein (Sugar); IMG reference gene:2503957799; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 1 1754316 10495810 Spico_1486 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter membrane protein 1 YP_004412071.1 1753408 R 760011 CDS YP_004412072.1 330837431 10495811 complement(1754410..1755708) 1 NC_015436.1 COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: tle:Tlet_1117 extracellular solute-binding protein; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein family 1; IMG reference gene:2503957800; PFAM: Bacterial extracellular solute-binding protein; carbohydrate ABC transporter substrate-binding protein 1755708 10495811 Spico_1487 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter substrate-binding protein YP_004412072.1 1754410 R 760011 CDS YP_004412073.1 330837432 10495812 complement(1755945..1757885) 1 NC_015436.1 COGs: COG1109 Phosphomannomutase; InterPro IPR005844:IPR005845; KEGG: chy:CHY_2012 phosphoglucosamine mutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; PRIAM: Phosphoglucosamine mutase; SPTR: Phosphoglucosamine mutase; IMG reference gene:2503957801; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; phosphoglucosamine mutase 1757885 10495812 Spico_1488 Sphaerochaeta coccoides DSM 17374 phosphoglucosamine mutase YP_004412073.1 1755945 R 760011 CDS YP_004412074.1 330837433 10495813 complement(1758257..1759849) 1 NC_015436.1 COGs: COG1384 Lysyl-tRNA synthetase (class I); HAMAP: Lysyl-tRNA synthetase, class I, archaeal-type; InterPro IPR002904:IPR020754:IPR020756; KEGG: ssm:Spirs_3699 lysyl-tRNA synthetase; PFAM: Lysyl-tRNA synthetase, class Ic; PRIAM: Lysine--tRNA ligase; SPTR: uncharacterized protein; TIGRFAM: Lysyl-tRNA synthetase, class I; IMG reference gene:2503957802; PFAM: tRNA synthetases class I (K); TIGRFAM: lysyl-tRNA synthetase, archaeal and spirochete; lysyl-tRNA synthetase 1759849 10495813 Spico_1489 Sphaerochaeta coccoides DSM 17374 lysyl-tRNA synthetase YP_004412074.1 1758257 R 760011 CDS YP_004412075.1 330837434 10495814 1759850..1760626 1 NC_015436.1 COGs: COG0797 Lipoprotein; InterPro IPR012997:IPR009009; KEGG: ssm:Spirs_0552 rare lipoprotein A; PFAM: Barwin-related endoglucanase; SPTR: RAre lipoprotein A rlpa; TIGRFAM: Rare lipoprotein A, bacterial; IMG reference gene:2503957803; PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; TIGRFAM: rare lipoprotein A; rare lipoprotein A 1760626 10495814 Spico_1490 Sphaerochaeta coccoides DSM 17374 rare lipoprotein A YP_004412075.1 1759850 D 760011 CDS YP_004412076.1 330837435 10495815 complement(1760709..1761905) 1 NC_015436.1 KEGG: lbf:LBF_1543 cytoplasmic membrane protein, ImpL63; SPTR: Macrolide export ATP-binding/permease MacB; IMG reference gene:2503957804; hypothetical protein 1761905 10495815 Spico_1491 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412076.1 1760709 R 760011 CDS YP_004412077.1 330837436 10495817 complement(1762481..1765135) 1 NC_015436.1 COGs: COG0525 Valyl-tRNA synthetase; HAMAP: Valyl-tRNA synthetase; InterPro IPR002303:IPR002300:IPR013155:IPR019499; KEGG: ssm:Spirs_2147 valyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ia; Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding; Valyl-tRNA synthetase, class Ia, tRNA-binding arm; PRIAM: Valine--tRNA ligase; SPTR: Valyl-tRNA synthetase; TIGRFAM: Valyl-tRNA synthetase; IMG reference gene:2503957806; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase; valyl-tRNA synthetase 1765135 10495817 Spico_1492 Sphaerochaeta coccoides DSM 17374 valyl-tRNA synthetase YP_004412077.1 1762481 R 760011 CDS YP_004412078.1 330837437 10495818 complement(1765405..1766625) 1 NC_015436.1 InterPro IPR011701; KEGG: cbt:CLH_2235 permease of the major facilitator superfamily; PFAM: Major facilitator superfamily MFS-1; SPTR: Possible MDR-type permease; IMG reference gene:2503957807; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein 1766625 10495818 Spico_1493 Sphaerochaeta coccoides DSM 17374 major facilitator superfamily protein YP_004412078.1 1765405 R 760011 CDS YP_004412079.1 330837438 10495819 complement(1766732..1767523) 1 NC_015436.1 COGs: COG4587 ABC-type uncharacterized transport system permease component; InterPro IPR010390; KEGG: fnu:FN0879 ABC transporter integral membrane protein; PFAM: Protein of unknown function DUF990; SPTR: Membrane protein; IMG reference gene:2503957808; PFAM: Protein of unknown function (DUF990); hypothetical protein 1767523 10495819 Spico_1494 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412079.1 1766732 R 760011 CDS YP_004412080.1 330837439 10495820 complement(1767520..1768539) 1 NC_015436.1 COGs: COG4586 ABC-type uncharacterized transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: fnu:FN0880 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Daunorubicin resistance ATP-binding protein drrA; IMG reference gene:2503957809; PFAM: ABC transporter; ABC transporter 1768539 10495820 Spico_1495 Sphaerochaeta coccoides DSM 17374 ABC transporter YP_004412080.1 1767520 R 760011 CDS YP_004412081.1 330837440 10495821 complement(1768520..1769308) 1 NC_015436.1 COGs: COG3694 ABC-type uncharacterized transport system permease component; InterPro IPR010390; KEGG: fnu:FN0881 ABC transporter integral membrane protein; PFAM: Protein of unknown function DUF990; SPTR: ABC transporter permease; IMG reference gene:2503957810; PFAM: Protein of unknown function (DUF990); hypothetical protein 1769308 10495821 Spico_1496 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412081.1 1768520 R 760011 CDS YP_004412082.1 330837441 10495822 complement(1769321..1769893) 1 NC_015436.1 COGs: COG2818 3-methyladenine DNA glycosylase; InterPro IPR005019; KEGG: vpr:Vpar_1788 methyladenine glycosylase; PFAM: Methyladenine glycosylase; PRIAM: DNA-3-methyladenine glycosylase I; SPTR: DNA-3-methyladenine glycosylase I; IMG reference gene:2503957811; PFAM: Methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I; DNA-3-methyladenine glycosylase I 1769893 10495822 Spico_1497 Sphaerochaeta coccoides DSM 17374 DNA-3-methyladenine glycosylase I YP_004412082.1 1769321 R 760011 CDS YP_004412083.1 330837442 10495823 complement(1770034..1772868) 1 NC_015436.1 COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits; KEGG: ere:EUBREC_0650 DNA helicase; SPTR: DNA helicase; IMG reference gene:2503957812; PFAM: UvrD/REP helicase; Protein of unknown function (DUF2726); DNA helicase 1772868 10495823 Spico_1498 Sphaerochaeta coccoides DSM 17374 DNA helicase YP_004412083.1 1770034 R 760011 CDS YP_004412084.1 330837443 10495824 complement(1773078..1774133) 1 NC_015436.1 COGs: COG3177 conserved hypothetical protein; InterPro IPR003812; KEGG: clo:HMPREF0868_0124 Fic family protein; PFAM: Filamentation induced by cAMP/death on curing-related; SPTR: Fic family protein; IMG reference gene:2503957813; PFAM: Fic/DOC family; Fic family protein 1774133 10495824 Spico_1499 Sphaerochaeta coccoides DSM 17374 Fic family protein YP_004412084.1 1773078 R 760011 CDS YP_004412085.1 330837444 10495825 1774488..1774661 1 NC_015436.1 IMG reference gene:2503957814; hypothetical protein 1774661 10495825 Spico_1500 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412085.1 1774488 D 760011 CDS YP_004412086.1 330837445 10495826 1774777..1777440 1 NC_015436.1 COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: sus:Acid_1929 LmbE family protein; PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; SPTR: LmbE family protein; IMG reference gene:2503957815; PFAM: GlcNAc-PI de-N-acetylase; LmbE family protein 1777440 10495826 Spico_1501 Sphaerochaeta coccoides DSM 17374 LmbE family protein YP_004412086.1 1774777 D 760011 CDS YP_004412087.1 330837446 10495827 complement(1777655..1779064) 1 NC_015436.1 COGs: COG1282 NAD/NADP transhydrogenase beta subunit; InterPro IPR004003; KEGG: lic:LIC10290 H+-translocating transhydrogenase subunit beta; PFAM: NAD(P) transhydrogenase, beta subunit; PRIAM: NAD(P)(+) transhydrogenase (AB-specific); SPTR: NAD(P) transhydrogenase subunit beta; IMG reference gene:2503957816; PFAM: NAD(P) transhydrogenase beta subunit; NAD(P)(+) transhydrogenase 1779064 10495827 Spico_1502 Sphaerochaeta coccoides DSM 17374 NAD(P)(+) transhydrogenase YP_004412087.1 1777655 R 760011 CDS YP_004412088.1 330837447 10495828 complement(1779061..1779345) 1 NC_015436.1 COGs: COG3288 NAD/NADP transhydrogenase alpha subunit; KEGG: lbf:LBF_0175 NAD(P)(+) transhydrogenase-like protein; SPTR: Proton-translocating transhydrogenase subunit alpha 2; IMG reference gene:2503957817; NAD(P)(+) transhydrogenase-like protein 1779345 10495828 Spico_1503 Sphaerochaeta coccoides DSM 17374 NAD(P)(+) transhydrogenase-like protein YP_004412088.1 1779061 R 760011 CDS YP_004412089.1 330837448 10495829 complement(1779342..1780511) 1 NC_015436.1 COGs: COG3288 NAD/NADP transhydrogenase alpha subunit; InterPro IPR007886:IPR007698; KEGG: abo:ABO_1329 pyridine nucleotide transhydrogenase A subunit; PFAM: Alanine dehydrogenase/PNT, C-terminal; Alanine dehydrogenase/PNT, N-terminal; PRIAM: NAD(P)(+) transhydrogenase (AB-specific); SPTR: Nicotinamide nucleotide transhydrogenase, subunit alpha; IMG reference gene:2503957818; PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: NAD(P) transhydrogenase, alpha subunit; NAD(P)(+) transhydrogenase 1780511 10495829 Spico_1504 Sphaerochaeta coccoides DSM 17374 NAD(P)(+) transhydrogenase YP_004412089.1 1779342 R 760011 CDS YP_004412090.1 330837449 10495830 complement(1780777..1782192) 1 NC_015436.1 COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR006094:IPR004113; KEGG: amt:Amet_3747 FAD linked oxidase domain-containing protein; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; PRIAM: D-lactate dehydrogenase (cytochrome); SPTR: FAD linked oxidase domain protein; IMG reference gene:2503957819; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD; D-lactate dehydrogenase 1782192 10495830 Spico_1505 Sphaerochaeta coccoides DSM 17374 D-lactate dehydrogenase YP_004412090.1 1780777 R 760011 CDS YP_004412091.1 330837450 10495831 complement(1782189..1783214) 1 NC_015436.1 COGs: COG2025 Electron transfer flavoprotein alpha subunit; InterPro IPR014730:IPR014731; KEGG: amt:Amet_3748 electron transfer flavoprotein, alpha subunit-like protein; PFAM: Electron transfer flavoprotein, alpha subunit, C-terminal; Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SPTR: Electron transfer flavoprotein, alpha subunit-like protein; IMG reference gene:2503957820; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain; electron transfer flavoprotein subunit alpha 1783214 10495831 Spico_1506 Sphaerochaeta coccoides DSM 17374 electron transfer flavoprotein subunit alpha YP_004412091.1 1782189 R 760011 CDS YP_004412092.1 330837451 10495832 complement(1783207..1784064) 1 NC_015436.1 COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR014730; KEGG: amt:Amet_3749 electron transfer flavoprotein, alpha/beta-subunit-like protein; PFAM: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SPTR: Electron transfer flavoprotein, alpha/beta-subunit-like protein; IMG reference gene:2503957821; PFAM: Electron transfer flavoprotein domain; electron transfer flavoprotein subunit alpha/beta 1784064 10495832 Spico_1507 Sphaerochaeta coccoides DSM 17374 electron transfer flavoprotein subunit alpha/beta YP_004412092.1 1783207 R 760011 CDS YP_004412093.1 330837452 10495833 complement(1784171..1785808) 1 NC_015436.1 COGs: COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component); InterPro IPR006318:IPR008731:IPR008279:IPR000121; KEGG: csc:Csac_2437 phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilising enzyme; Phosphotransferase system, PEP-utilising enzyme, N-terminal; PEP-utilising enzyme, mobile domain; PRIAM: Phosphoenolpyruvate--protein phosphotransferase; SPTR: Phosphoenolpyruvate--protein phosphotransferase; TIGRFAM: Phosphoenolpyruvate-protein phosphotransferase; IMG reference gene:2503957822; PFAM: PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; phosphoenolpyruvate-protein phosphotransferase 1785808 10495833 Spico_1508 Sphaerochaeta coccoides DSM 17374 phosphoenolpyruvate-protein phosphotransferase YP_004412093.1 1784171 R 760011 CDS YP_004412094.1 330837453 10495834 complement(1785827..1786084) 1 NC_015436.1 COGs: COG1925 Phosphotransferase system HPr-related protein; InterPro IPR005698; KEGG: eel:EUBELI_20516 phosphocarrier protein HPr; PFAM: Phosphotransferase system, phosphocarrier HPr protein; SPTR: uncharacterized protein; TIGRFAM: Phosphotransferase system, phosphocarrier HPr protein; IMG reference gene:2503957823; PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family; phosphotransferase system, phosphocarrier protein HPr 1786084 10495834 Spico_1509 Sphaerochaeta coccoides DSM 17374 phosphotransferase system, phosphocarrier protein HPr YP_004412094.1 1785827 R 760011 CDS YP_004412095.1 330837454 10495835 complement(1786150..1787364) 1 NC_015436.1 COGs: COG1015 Phosphopentomutase; InterPro IPR006124; KEGG: sfv:SFV_3385 mutase; PFAM: Metalloenzyme; SPTR: Phosphopentomutase; IMG reference gene:2503957824; PFAM: Metalloenzyme superfamily; metalloenzyme domain-containing protein 1787364 10495835 Spico_1510 Sphaerochaeta coccoides DSM 17374 metalloenzyme domain-containing protein YP_004412095.1 1786150 R 760011 CDS YP_004412096.1 330837455 10495836 complement(1787404..1788567) 1 NC_015436.1 COGs: COG3457 amino acid racemase; InterPro IPR001608; KEGG: thx:Thet_0218 alanine racemase domain-containing protein; PFAM: Alanine racemase, N-terminal; SPTR: uncharacterized protein; IMG reference gene:2503957825; PFAM: Alanine racemase, N-terminal domain; alanine racemase 1788567 10495836 Spico_1511 Sphaerochaeta coccoides DSM 17374 alanine racemase YP_004412096.1 1787404 R 760011 CDS YP_004412097.1 330837456 10495837 complement(1788575..1789696) 1 NC_015436.1 KEGG: csh:Closa_2021 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957826; PFAM: Aminotransferase class-V; hypothetical protein 1789696 10495837 Spico_1512 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412097.1 1788575 R 760011 CDS YP_004412098.1 330837457 10495838 complement(1789702..1790592) 1 NC_015436.1 COGs: COG1735 metal-dependent hydrolase with the TIM-barrel fold; InterPro IPR001559; KEGG: str:Sterm_0361 aryldialkylphosphatase; PFAM: Aryldialkylphosphatase; SPTR: Phosphotriesterase-like protein; IMG reference gene:2503957827; PFAM: Phosphotriesterase; aryldialkylphosphatase 1790592 10495838 Spico_1513 Sphaerochaeta coccoides DSM 17374 aryldialkylphosphatase YP_004412098.1 1789702 R 760011 CDS YP_004412099.1 330837458 10495839 complement(1790589..1791710) 1 NC_015436.1 KEGG: csh:Closa_2023 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957828; PFAM: Amidase; hypothetical protein 1791710 10495839 Spico_1514 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412099.1 1790589 R 760011 CDS YP_004412100.1 330837459 10495840 complement(1791786..1793072) 1 NC_015436.1 InterPro IPR019733; KEGG: ttm:Tthe_1693 protein of unknown function, YhfT; PFAM: Uncharacterised protein family YhfT; SPTR: uncharacterized protein; IMG reference gene:2503957829; PFAM: Protein of unknown function; hypothetical protein 1793072 10495840 Spico_1515 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412100.1 1791786 R 760011 CDS YP_004412101.1 330837460 10495841 complement(1793115..1793471) 1 NC_015436.1 KEGG: xbo:XBJ1_0132 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957830; PFAM: Protein of unknown function DUF2620; hypothetical protein 1793471 10495841 Spico_1516 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412101.1 1793115 R 760011 CDS YP_004412102.1 330837461 10495842 complement(1793482..1793844) 1 NC_015436.1 InterPro IPR011608; KEGG: sth:STH556 transcriptional antiterminator; PFAM: PRD; SPTR: Predicted protein; IMG reference gene:2503957831; PFAM: PRD domain; PRD domain-containing protein 1793844 10495842 Spico_1517 Sphaerochaeta coccoides DSM 17374 PRD domain-containing protein YP_004412102.1 1793482 R 760011 CDS YP_004412103.1 330837462 10495843 complement(1793871..1794815) 1 NC_015436.1 KEGG: thx:Thet_0211 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957832; hypothetical protein 1794815 10495843 Spico_1518 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412103.1 1793871 R 760011 CDS YP_004412104.1 330837463 10495844 1795112..1796293 1 NC_015436.1 COGs: COG1979 Uncharacterized oxidoreductase Fe-dependent alcohol dehydrogenase; InterPro IPR001670; KEGG: apa:APP7_1949 probable NADH-dependent butanol dehydrogenase 1; PFAM: Alcohol dehydrogenase, iron-type; PRIAM: Alcohol dehydrogenase; SPTR: Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase; IMG reference gene:2503957833; PFAM: Iron-containing alcohol dehydrogenase; alcohol dehydrogenase 1796293 10495844 Spico_1519 Sphaerochaeta coccoides DSM 17374 alcohol dehydrogenase YP_004412104.1 1795112 D 760011 CDS YP_004412105.1 330837464 10495845 complement(1796325..1798256) 1 NC_015436.1 COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR001140:IPR003439; KEGG: ssm:Spirs_3268 ABC transporter related protein; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC-type multidrug transport system, ATPase and permease components; IMG reference gene:2503957834; PFAM: ABC transporter transmembrane region; ABC transporter; xenobiotic-transporting ATPase 1798256 10495845 Spico_1520 Sphaerochaeta coccoides DSM 17374 xenobiotic-transporting ATPase YP_004412105.1 1796325 R 760011 CDS YP_004412106.1 330837465 10495846 complement(1798249..1800000) 1 NC_015436.1 COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR001140:IPR003439; KEGG: ssm:Spirs_3269 ABC transporter related protein; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: uncharacterized protein; IMG reference gene:2503957835; PFAM: ABC transporter transmembrane region; ABC transporter; xenobiotic-transporting ATPase 1800000 10495846 Spico_1521 Sphaerochaeta coccoides DSM 17374 xenobiotic-transporting ATPase YP_004412106.1 1798249 R 760011 CDS YP_004412107.1 330837466 10495847 complement(1800019..1800474) 1 NC_015436.1 InterPro IPR000835; KEGG: ssm:Spirs_3270 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator, MarR family; IMG reference gene:2503957836; PFAM: MarR family; regulatory protein MarR 1800474 10495847 Spico_1522 Sphaerochaeta coccoides DSM 17374 regulatory protein MarR YP_004412107.1 1800019 R 760011 CDS YP_004412108.1 330837467 10495848 1800951..1803296 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR011110:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; Listeria/Bacterioides repeat; Two component regulator propeller; SPTR: uncharacterized protein; IMG reference gene:2503957837; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 1803296 10495848 Spico_1523 Sphaerochaeta coccoides DSM 17374 chromosome condensation regulator RCC1 YP_004412108.1 1800951 D 760011 CDS YP_004412109.1 330837468 10495849 1803615..1805957 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; Listeria/Bacterioides repeat; SPTR: uncharacterized protein; IMG reference gene:2503957838; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 1805957 10495849 Spico_1524 Sphaerochaeta coccoides DSM 17374 chromosome condensation regulator RCC1 YP_004412109.1 1803615 D 760011 CDS YP_004412110.1 330837469 10495850 1806269..1808893 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR011110:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Listeria/Bacterioides repeat; Two component regulator propeller; Regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; TIGRFAM: Listeria/Bacterioides repeat; IMG reference gene:2503957839; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; TIGRFAM: Listeria/Bacterioides repeat; cell wall/surface repeat protein 1808893 10495850 Spico_1525 Sphaerochaeta coccoides DSM 17374 cell wall/surface repeat protein YP_004412110.1 1806269 D 760011 CDS YP_004412111.1 330837470 10495851 complement(1809074..1809436) 1 NC_015436.1 InterPro IPR014922; KEGG: gur:Gura_3522 hypothetical protein; PFAM: Protein of unknown function DUF1801; SPTR: uncharacterized protein; IMG reference gene:2503957840; PFAM: Domain of unknown function (DU1801); hypothetical protein 1809436 10495851 Spico_1526 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412111.1 1809074 R 760011 CDS YP_004412112.1 330837471 10495852 complement(1809423..1810817) 1 NC_015436.1 COGs: COG1114 Branched-chain amino acid permease; InterPro IPR004685; KEGG: efa:EF0243 branched-chain amino acid transport system II carrier protein; PFAM: Branched-chain amino acid transport system II carrier protein; SPTR: Branched-chain amino acid transport system II carrier protein; TIGRFAM: Branched-chain amino acid transport system II carrier protein; IMG reference gene:2503957841; PFAM: Branched-chain amino acid transport protein; TIGRFAM: branched-chain amino acid uptake carrier; branched-chain amino acid transport system II carrier protein 1810817 10495852 Spico_1527 Sphaerochaeta coccoides DSM 17374 branched-chain amino acid transport system II carrier protein YP_004412112.1 1809423 R 760011 CDS YP_004412113.1 330837472 10495853 complement(1810886..1811638) 1 NC_015436.1 COGs: COG0730 permease; InterPro IPR002781; KEGG: cbt:CLH_3273 transporter; PFAM: Protein of unknown function DUF81; SPTR: Transporter; IMG reference gene:2503957842; PFAM: Sulfite exporter TauE/SafE; hypothetical protein 1811638 10495853 Spico_1528 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412113.1 1810886 R 760011 CDS YP_004412114.1 330837473 10495854 complement(1811761..1814895) 1 NC_015436.1 InterPro IPR006104:IPR006103; KEGG: cpy:Cphy_3081 glycoside hydrolase; PFAM: Glycoside hydrolase, family 2, carbohydrate-binding; Glycoside hydrolase, family 2, TIM barrel; SPTR: Glycoside hydrolase 2 sugar binding; IMG reference gene:2503957843; glycoside hydrolase 2 sugar binding protein 1814895 10495854 Spico_1529 Sphaerochaeta coccoides DSM 17374 glycoside hydrolase 2 sugar binding protein YP_004412114.1 1811761 R 760011 CDS YP_004412115.1 330837474 10495855 complement(1814951..1815616) 1 NC_015436.1 InterPro IPR015305; KEGG: bld:BLi01374 YesU; PFAM: Protein of unknown function DUF1961; SPTR: YesU; IMG reference gene:2503957844; PFAM: Domain of unknown function (DUF1961); hypothetical protein 1815616 10495855 Spico_1530 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412115.1 1814951 R 760011 CDS YP_004412116.1 330837475 10495856 complement(1815662..1818397) 1 NC_015436.1 KEGG: cpy:Cphy_3080 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957845; hypothetical protein 1818397 10495856 Spico_1531 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412116.1 1815662 R 760011 CDS YP_004412117.1 330837476 10495857 complement(1818614..1820167) 1 NC_015436.1 COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: cpy:Cphy_0341 extracellular solute-binding protein; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: uncharacterized protein; IMG reference gene:2503957846; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein 1820167 10495857 Spico_1532 Sphaerochaeta coccoides DSM 17374 ABC transporter substrate-binding protein YP_004412117.1 1818614 R 760011 CDS YP_004412118.1 330837477 10495858 complement(1820230..1821132) 1 NC_015436.1 COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: cpy:Cphy_0340 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: uncharacterized protein; IMG reference gene:2503957847; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 2 1821132 10495858 Spico_1533 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter membrane protein 2 YP_004412118.1 1820230 R 760011 CDS YP_004412119.1 330837478 10495859 complement(1821149..1822129) 1 NC_015436.1 COGs: COG4209 ABC-type polysaccharide transport system permease component; InterPro IPR000515; KEGG: cob:COB47_1870 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: uncharacterized protein; IMG reference gene:2503957848; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 1 1822129 10495859 Spico_1534 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter membrane protein 1 YP_004412119.1 1821149 R 760011 CDS YP_004412120.1 330837479 10495860 complement(1822286..1824076) 1 NC_015436.1 COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR001140:IPR003439; KEGG: pjd:Pjdr2_0901 ABC transporter related; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: uncharacterized protein; IMG reference gene:2503957849; PFAM: ABC transporter transmembrane region; ABC transporter; xenobiotic-transporting ATPase 1824076 10495860 Spico_1535 Sphaerochaeta coccoides DSM 17374 xenobiotic-transporting ATPase YP_004412120.1 1822286 R 760011 CDS YP_004412121.1 330837480 10495861 complement(1824078..1825817) 1 NC_015436.1 COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR001140:IPR003439; KEGG: pjd:Pjdr2_0902 ABC transporter related; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter ATP-binding protein; IMG reference gene:2503957850; PFAM: ABC transporter transmembrane region; ABC transporter; xenobiotic-transporting ATPase 1825817 10495861 Spico_1536 Sphaerochaeta coccoides DSM 17374 xenobiotic-transporting ATPase YP_004412121.1 1824078 R 760011 CDS YP_004412122.1 330837481 10495862 complement(1825975..1826613) 1 NC_015436.1 COGs: COG0637 phosphatase/phosphohexomutase; InterPro IPR010972:IPR010976:IPR006402:IPR005834; KEGG: csh:Closa_0870 beta-phosphoglucomutase; PFAM: Haloacid dehalogenase-like hydrolase; PRIAM: Beta-phosphoglucomutase; SPTR: Beta-phosphoglucomutase; TIGRFAM: Beta-phosphoglucomutase; Beta-phosphoglucomutase hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; IMG reference gene:2503957851; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: beta-phosphoglucomutase; beta-phosphoglucomutase hydrolase; haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; beta-phosphoglucomutase 1826613 10495862 Spico_1537 Sphaerochaeta coccoides DSM 17374 beta-phosphoglucomutase YP_004412122.1 1825975 R 760011 CDS YP_004412123.1 330837482 10495863 complement(1826613..1828988) 1 NC_015436.1 COGs: COG1554 Trehalose and maltose hydrolase (possible phosphorylase); InterPro IPR005196:IPR005195:IPR005194; KEGG: gym:GYMC10_0477 glycoside hydrolase 65 central catalytic; PFAM: Glycoside hydrolase, family 65, central catalytic; Glycoside hydrolase, family 65, N-terminal; Glycoside hydrolase, family 65, C-terminal; PRIAM: Kojibiose phosphorylase; SPTR: uncharacterized protein; IMG reference gene:2503957852; PFAM: Glycosyl hydrolase 65, C-terminal domain; Glycosyl hydrolase 65 central catalytic domain; Glycosyl hydrolase 65, N-terminal domain; Kojibiose phosphorylase 1828988 10495863 Spico_1538 Sphaerochaeta coccoides DSM 17374 Kojibiose phosphorylase YP_004412123.1 1826613 R 760011 CDS YP_004412124.1 330837483 10495864 complement(1828988..1829842) 1 NC_015436.1 COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: gym:GYMC10_0424 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503957853; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 2 1829842 10495864 Spico_1539 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter membrane protein 2 YP_004412124.1 1828988 R 760011 CDS YP_004412125.1 330837484 10495865 complement(1829839..1830720) 1 NC_015436.1 COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: gym:GYMC10_0423 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; IMG reference gene:2503957854; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 1 1830720 10495865 Spico_1540 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter membrane protein 1 YP_004412125.1 1829839 R 760011 CDS YP_004412126.1 330837485 10495866 complement(1830781..1831995) 1 NC_015436.1 COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: gym:GYMC10_0422 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein family 1; IMG reference gene:2503957855; PFAM: Bacterial extracellular solute-binding protein; ABC transporter substrate-binding protein 1831995 10495866 Spico_1541 Sphaerochaeta coccoides DSM 17374 ABC transporter substrate-binding protein YP_004412126.1 1830781 R 760011 CDS YP_004412127.1 330837486 10495867 complement(1832302..1833357) 1 NC_015436.1 COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: gym:GYMC10_0421 transcriptional regulator, LacI family; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI; SPTR: Transcriptional regulator, LacI family; IMG reference gene:2503957856; PFAM: Bacterial regulatory proteins, lacI family; family; LacI family transcriptional regulator 1833357 10495867 Spico_1542 Sphaerochaeta coccoides DSM 17374 LacI family transcriptional regulator YP_004412127.1 1832302 R 760011 CDS YP_004412128.1 330837487 10495868 1833499..1833852 1 NC_015436.1 COGs: COG3830 ACT domain-containing protein; HAMAP: Uncharacterised protein family UPF0237, ACT domain-containing; InterPro IPR022986:IPR002912; KEGG: bde:BDP_1787 ACT domain-containing protein; PFAM: Amino acid-binding ACT; SPTR: uncharacterized protein; IMG reference gene:2503957857; PFAM: ACT domain; ACT domain-containing protein 1833852 10495868 Spico_1543 Sphaerochaeta coccoides DSM 17374 ACT domain-containing protein YP_004412128.1 1833499 D 760011 CDS YP_004412129.1 330837488 10495869 1833903..1835267 1 NC_015436.1 COGs: COG2848 conserved hypothetical protein; HAMAP: Uncharacterised protein family UPF0210; InterPro IPR007841; KEGG: cpy:Cphy_2797 hypothetical protein; PFAM: Uncharacterised protein family UPF0210; SPTR: UPF0210 protein Cphy_2797; IMG reference gene:2503957858; PFAM: Uncharacterized ACR (DUF711); hypothetical protein 1835267 10495869 Spico_1544 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412129.1 1833903 D 760011 CDS YP_004412130.1 330837489 10495871 complement(1835453..1835848) 1 NC_015436.1 COGs: COG5015 conserved hypothetical protein; InterPro IPR011576; KEGG: bpb:bpr_I1023 pyridoxamine 5'-phosphate oxidase; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; SPTR: Pyridoxamine 5'-phosphate oxidase; IMG reference gene:2503957860; PFAM: Pyridoxamine 5'-phosphate oxidase; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 1835848 10495871 Spico_1546 Sphaerochaeta coccoides DSM 17374 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_004412130.1 1835453 R 760011 CDS YP_004412131.1 330837490 10495872 1836245..1837264 1 NC_015436.1 KEGG: bfr:BF3847 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957861; hypothetical protein 1837264 10495872 Spico_1547 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412131.1 1836245 D 760011 CDS YP_004412132.1 330837491 10495873 complement(1837351..1838757) 1 NC_015436.1 COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: cbk:CLL_A1589 Na+-driven multidrug efflux pump; PFAM: Multi antimicrobial extrusion protein; SPTR: Mate efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein; IMG reference gene:2503957862; PFAM: MatE; TIGRFAM: efflux protein, MATE family; MATE efflux family protein 1838757 10495873 Spico_1548 Sphaerochaeta coccoides DSM 17374 MATE efflux family protein YP_004412132.1 1837351 R 760011 CDS YP_004412133.1 330837492 10495874 complement(1838897..1839673) 1 NC_015436.1 COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR012838:IPR007197; KEGG: efa:EF1612 pyruvate formate-lyase activating enzyme; PFAM: Radical SAM; PRIAM: [Formate-C-acetyltransferase]-activating enzyme; SPTR: Pyruvate formate-lyase 1-activating enzyme; TIGRFAM: Pyruvate formate-lyase activating; IMG reference gene:2503957863; PFAM: Radical SAM superfamily; TIGRFAM: pyruvate formate-lyase 1-activating enzyme; pyruvate formate-lyase activating enzyme 1839673 10495874 Spico_1549 Sphaerochaeta coccoides DSM 17374 pyruvate formate-lyase activating enzyme YP_004412133.1 1838897 R 760011 CDS YP_004412134.1 330837493 10495875 complement(1839744..1841981) 1 NC_015436.1 COGs: COG1882 Pyruvate-formate lyase; InterPro IPR005949:IPR004184:IPR001150; KEGG: efa:EF1613 formate acetyltransferase; PFAM: Pyruvate formate-lyase, PFL; Formate C-acetyltransferase glycine radical; PRIAM: Formate C-acetyltransferase; SPTR: Formate acetyltransferase; TIGRFAM: Formate acetyltransferase; IMG reference gene:2503957864; PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: formate acetyltransferase 1; formate acetyltransferase 1841981 10495875 Spico_1550 Sphaerochaeta coccoides DSM 17374 formate acetyltransferase YP_004412134.1 1839744 R 760011 CDS YP_004412135.1 330837494 10495876 1842360..1843394 1 NC_015436.1 COGs: COG2502 Asparagine synthetase A; HAMAP: Aspartate--ammonia ligase; InterPro IPR004618; KEGG: pdi:BDI_3717 asparagine synthetase AsnA; PFAM: Aspartate--ammonia ligase; PRIAM: Aspartate--ammonia ligase; SPTR: Aspartate--ammonia ligase; TIGRFAM: Aspartate--ammonia ligase; IMG reference gene:2503957865; PFAM: Aspartate-ammonia ligase; TIGRFAM: aspartate--ammonia ligase, AsnA-type; aspartate--ammonia ligase 1843394 10495876 Spico_1551 Sphaerochaeta coccoides DSM 17374 aspartate--ammonia ligase YP_004412135.1 1842360 D 760011 CDS YP_004412136.1 330837495 10495877 1843424..1844665 1 NC_015436.1 COGs: COG2081 flavoprotein; InterPro IPR004792; KEGG: mhu:Mhun_1926 HI0933-like protein; PFAM: Conserved hypothetical protein CHP00275, flavoprotein HI0933-like; SPTR: HI0933 family protein; TIGRFAM: Conserved hypothetical protein CHP00275, flavoprotein HI0933-like; IMG reference gene:2503957866; PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family; hypothetical protein 1844665 10495877 Spico_1552 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412136.1 1843424 D 760011 CDS YP_004412137.1 330837496 10495878 1844790..1845350 1 NC_015436.1 COGs: COG0431 flavoprotein; InterPro IPR005025; KEGG: cpy:Cphy_1114 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR: NADPH-dependent FMN reductase; IMG reference gene:2503957867; PFAM: NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 1845350 10495878 Spico_1553 Sphaerochaeta coccoides DSM 17374 NADPH-dependent FMN reductase YP_004412137.1 1844790 D 760011 CDS YP_004412138.1 330837497 10495879 complement(1845469..1848543) 1 NC_015436.1 InterPro IPR011493; KEGG: hwa:HQ1081A halomucin; SPTR: Halomucin; IMG reference gene:2503957868; hypothetical protein 1848543 10495879 Spico_1554 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412138.1 1845469 R 760011 CDS YP_004412139.1 330837498 10495880 complement(1849050..1850192) 1 NC_015436.1 COGs: COG2055 Malate/L-lactate dehydrogenase; InterPro IPR003767; KEGG: kol:Kole_0486 malate/L-lactate dehydrogenase; PFAM: Malate/L-lactate dehydrogenase; PRIAM: Malate dehydrogenase; SPTR: Malate/L-lactate dehydrogenase; IMG reference gene:2503957869; PFAM: Malate/L-lactate dehydrogenase; malate dehydrogenase 1850192 10495880 Spico_1555 Sphaerochaeta coccoides DSM 17374 malate dehydrogenase YP_004412139.1 1849050 R 760011 CDS YP_004412140.1 330837499 10495881 complement(1850385..1851203) 1 NC_015436.1 COGs: COG1349 Transcriptional regulators of sugar metabolism; InterPro IPR001034:IPR014036; KEGG: pca:Pcar_0940 DeoR-type transcriptional regulator; PFAM: HTH transcriptional regulator, DeoR; HTH transcriptional regulator, DeoR N-terminal; SMART: HTH transcriptional regulator, DeoR N-terminal; SPTR: Transcriptional regulator, DeoR family; IMG reference gene:2503957870; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain; DeoR family transcriptional regulator 1851203 10495881 Spico_1556 Sphaerochaeta coccoides DSM 17374 DeoR family transcriptional regulator YP_004412140.1 1850385 R 760011 CDS YP_004412141.1 330837500 10495882 complement(1851260..1852759) 1 NC_015436.1 COGs: COG0554 Glycerol kinase; HAMAP: Glycerol kinase; InterPro IPR005999:IPR018484:IPR018485; KEGG: ssm:Spirs_1645 glycerol kinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; PRIAM: Glycerol kinase; SPTR: Glycerol kinase; TIGRFAM: Glycerol kinase; IMG reference gene:2503957871; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase; glycerol kinase 1852759 10495882 Spico_1557 Sphaerochaeta coccoides DSM 17374 glycerol kinase YP_004412141.1 1851260 R 760011 CDS YP_004412142.1 330837501 10495883 complement(1852954..1854192) 1 NC_015436.1 COGs: COG3007 Uncharacterized paraquat-inducible protein B; HAMAP: Uncharacterised protein family, TER reductase; InterPro IPR010758; KEGG: sta:STHERM_c16300 trans-2-enoyl-CoA reductase; PFAM: Uncharacterised protein family, TER reductase; PRIAM: Trans-2-enoyl-CoA reductase (NAD(+)); SPTR: Trans-2-enoyl-CoA reductase; IMG reference gene:2503957872; PFAM: Trans-2-enoyl-CoA reductase catalytic region; NAD(P)H binding domain of trans-2-enoyl-CoA reductase; Enoyl reductase FAD binding domain; reductase 1854192 10495883 Spico_1558 Sphaerochaeta coccoides DSM 17374 reductase YP_004412142.1 1852954 R 760011 CDS YP_004412143.1 330837502 10495884 complement(1854189..1854662) 1 NC_015436.1 COGs: COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase; InterPro IPR013114; KEGG: sta:STHERM_c08550 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; SPTR: Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabZ; IMG reference gene:2503957873; PFAM: FabA-like domain; 3-hydroxyacyl-ACP dehydratase 1854662 10495884 Spico_1559 Sphaerochaeta coccoides DSM 17374 3-hydroxyacyl-ACP dehydratase YP_004412143.1 1854189 R 760011 CDS YP_004412144.1 330837503 10495885 complement(1854697..1855956) 1 NC_015436.1 COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR017568:IPR014030:IPR014031:IPR020841; KEGG: ssm:Spirs_2300 3-oxoacyl-(acyl-carrier-protein) synthase 2; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase II; SMART: Polyketide synthase, beta-ketoacyl synthase domain; SPTR: 3-oxoacyl-[acyl-carrier-protein] synthase 2; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; IMG reference gene:2503957874; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II; 3-oxoacyl-ACP synthase 1855956 10495885 Spico_1560 Sphaerochaeta coccoides DSM 17374 3-oxoacyl-ACP synthase YP_004412144.1 1854697 R 760011 CDS YP_004412145.1 330837504 10495886 complement(1855968..1856753) 1 NC_015436.1 COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR011284:IPR002198:IPR020842; KEGG: sta:STHERM_c21540 3-oxoacyl-[acyl-carrier-protein] reductase; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SMART: Polyketide synthase/Fatty acid synthase, KR; SPTR: 3-oxoacyl-[acyl-carrier-protein] reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; IMG reference gene:2503957875; PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-ACP reductase 1856753 10495886 Spico_1561 Sphaerochaeta coccoides DSM 17374 3-oxoacyl-ACP reductase YP_004412145.1 1855968 R 760011 CDS YP_004412146.1 330837505 10495887 complement(1856746..1857738) 1 NC_015436.1 COGs: COG0331 (acyl-carrier-protein) S-malonyltransferase; InterPro IPR014043:IPR020801; KEGG: sta:STHERM_c21550 hypothetical protein; PFAM: Acyl transferase; PRIAM: [Acyl-carrier-protein] S-malonyltransferase; SMART: Polyketide synthase, acyl transferase domain; SPTR: uncharacterized protein; IMG reference gene:2503957876; PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; ACP S-malonyltransferase 1857738 10495887 Spico_1562 Sphaerochaeta coccoides DSM 17374 ACP S-malonyltransferase YP_004412146.1 1856746 R 760011 CDS YP_004412147.1 330837506 10495888 1857878..1858378 1 NC_015436.1 COGs: COG0511 Biotin carboxyl carrier protein; InterPro IPR001249:IPR000089; KEGG: bts:Btus_0728 acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: Biotin/lipoyl attachment; SPTR: Acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: Acetyl-CoA biotin carboxyl carrier; IMG reference gene:2503957877; PFAM: Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; acetyl-CoA carboxylase, biotin carboxyl carrier protein 1858378 10495888 Spico_1563 Sphaerochaeta coccoides DSM 17374 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_004412147.1 1857878 D 760011 CDS YP_004412148.1 330837507 10495889 1858375..1859733 1 NC_015436.1 COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit; InterPro IPR005481:IPR005479:IPR005482; KEGG: sta:STHERM_c08570 pyruvate carboxylase subunit A; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; PRIAM: Biotin carboxylase; SMART: Biotin carboxylase, C-terminal; SPTR: Pyruvate carboxylase subunit A; IMG reference gene:2503957878; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; biotin carboxylase 1859733 10495889 Spico_1564 Sphaerochaeta coccoides DSM 17374 biotin carboxylase YP_004412148.1 1858375 D 760011 CDS YP_004412149.1 330837508 10495890 1859726..1860562 1 NC_015436.1 COGs: COG0777 Acetyl-CoA carboxylase beta subunit; HAMAP: Acetyl-CoA carboxylase carboxyl transferase, beta subunit; InterPro IPR000438:IPR000022; KEGG: ssm:Spirs_2294 acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: Carboxyl transferase; PRIAM: Acetyl-CoA carboxylase; SPTR: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; IMG reference gene:2503957879; PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; acetyl-CoA carboxylase carboxyltransferase subunit alpha 1860562 10495890 Spico_1565 Sphaerochaeta coccoides DSM 17374 acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_004412149.1 1859726 D 760011 CDS YP_004412150.1 330837509 10495891 1860555..1861517 1 NC_015436.1 COGs: COG0825 Acetyl-CoA carboxylase alpha subunit; HAMAP: Acetyl-CoA carboxylase, alpha subunit; InterPro IPR001095; KEGG: tde:TDE0589 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: Acetyl-CoA carboxylase, alpha subunit; PRIAM: Acetyl-CoA carboxylase; SPTR: Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; TIGRFAM: Acetyl-CoA carboxylase, alpha subunit; IMG reference gene:2503957880; PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; acetyl-CoA carboxylase carboxyltransferase subunit alpha 1861517 10495891 Spico_1566 Sphaerochaeta coccoides DSM 17374 acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_004412150.1 1860555 D 760011 CDS YP_004412151.1 330837510 10495892 1861535..1863190 1 NC_015436.1 COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR000873; KEGG: pdi:BDI_2255 acetyl-coenzyme A synthetase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Butyrate--CoA ligase; SPTR: uncharacterized protein; IMG reference gene:2503957881; PFAM: AMP-binding enzyme; butyrate--CoA ligase 1863190 10495892 Spico_1567 Sphaerochaeta coccoides DSM 17374 butyrate--CoA ligase YP_004412151.1 1861535 D 760011 CDS YP_004412152.1 330837511 10495893 complement(1863268..1863708) 1 NC_015436.1 COGs: COG5496 thioesterase; KEGG: cob:COB47_1987 thioesterase superfamily protein; SPTR: uncharacterized protein; IMG reference gene:2503957882; thioesterase 1863708 10495893 Spico_1568 Sphaerochaeta coccoides DSM 17374 thioesterase YP_004412152.1 1863268 R 760011 CDS YP_004412153.1 330837512 10495894 1863830..1865083 1 NC_015436.1 COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: cbe:Cbei_0707 major facilitator transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; IMG reference gene:2503957883; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein 1865083 10495894 Spico_1569 Sphaerochaeta coccoides DSM 17374 major facilitator superfamily protein YP_004412153.1 1863830 D 760011 CDS YP_004412154.1 330837513 10495895 1865206..1865691 1 NC_015436.1 COGs: COG2077 Peroxiredoxin; HAMAP: thiol peroxidase Tpx; InterPro IPR002065:IPR013740; KEGG: cbt:CLH_2671 thiol peroxidase; PFAM: Redoxin; SPTR: thiol peroxidase; IMG reference gene:2503957884; PFAM: Redoxin; thiol peroxidase 1865691 10495895 Spico_1570 Sphaerochaeta coccoides DSM 17374 thiol peroxidase YP_004412154.1 1865206 D 760011 CDS YP_004412155.1 330837514 10495896 complement(1865729..1866103) 1 NC_015436.1 InterPro IPR013096; KEGG: sus:Acid_7125 cupin 2 domain-containing protein; PFAM: Cupin 2, conserved barrel; SPTR: uncharacterized protein; IMG reference gene:2503957885; PFAM: Cupin domain; cupin 1866103 10495896 Spico_1571 Sphaerochaeta coccoides DSM 17374 cupin YP_004412155.1 1865729 R 760011 CDS YP_004412156.1 330837515 10495897 complement(1866150..1868117) 1 NC_015436.1 COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR003953; KEGG: ske:Sked_06460 succinate dehydrogenase/fumarate reductase flavoprotein subunit; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; SPTR: uncharacterized protein; IMG reference gene:2503957886; PFAM: FAD binding domain; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 1868117 10495897 Spico_1572 Sphaerochaeta coccoides DSM 17374 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein YP_004412156.1 1866150 R 760011 CDS YP_004412157.1 330837516 10495898 complement(1868160..1868933) 1 NC_015436.1 COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198:IPR020842; KEGG: pac:PPA0372 3-ketoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SMART: Polyketide synthase/Fatty acid synthase, KR; SPTR: Short-chain dehydrogenase/reductase SDR; IMG reference gene:2503957887; PFAM: short chain dehydrogenase; 3-oxoacyl-ACP reductase 1868933 10495898 Spico_1573 Sphaerochaeta coccoides DSM 17374 3-oxoacyl-ACP reductase YP_004412157.1 1868160 R 760011 CDS YP_004412158.1 330837517 10495899 complement(1868995..1870374) 1 NC_015436.1 COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family; InterPro IPR001155; KEGG: trq:TRQ2_0516 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; SPTR: NADH:flavin oxidoreductase/NADH oxidase; IMG reference gene:2503957888; PFAM: NADH:flavin oxidoreductase / NADH oxidase; NADH:flavin oxidoreductase 1870374 10495899 Spico_1574 Sphaerochaeta coccoides DSM 17374 NADH:flavin oxidoreductase YP_004412158.1 1868995 R 760011 CDS YP_004412159.1 330837518 10495900 complement(1870456..1871472) 1 NC_015436.1 COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: tmt:Tmath_0260 transcriptional regulator, LacI family; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI; SPTR: uncharacterized protein; IMG reference gene:2503957889; PFAM: Bacterial regulatory proteins, lacI family; family; LacI family transcriptional regulator 1871472 10495900 Spico_1575 Sphaerochaeta coccoides DSM 17374 LacI family transcriptional regulator YP_004412159.1 1870456 R 760011 CDS YP_004412160.1 330837519 10495901 complement(1871528..1872232) 1 NC_015436.1 COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: cpy:Cphy_3532 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: uncharacterized protein; IMG reference gene:2503957890; PFAM: ABC transporter; amino acid ABC transporter ATP-binding protein 1872232 10495901 Spico_1576 Sphaerochaeta coccoides DSM 17374 amino acid ABC transporter ATP-binding protein YP_004412160.1 1871528 R 760011 CDS YP_004412161.1 330837520 10495902 complement(1872234..1872992) 1 NC_015436.1 COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: dma:DMR_05820 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: uncharacterized protein; IMG reference gene:2503957891; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; amino acid ABC transporter ATP-binding protein 1872992 10495902 Spico_1577 Sphaerochaeta coccoides DSM 17374 amino acid ABC transporter ATP-binding protein YP_004412161.1 1872234 R 760011 CDS YP_004412162.1 330837521 10495903 complement(1872985..1873866) 1 NC_015436.1 COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: amt:Amet_2076 inner-membrane translocator; PFAM: ABC transporter permease; SPTR: uncharacterized protein; IMG reference gene:2503957892; PFAM: Branched-chain amino acid transport system / permease component; inner-membrane translocator 1873866 10495903 Spico_1578 Sphaerochaeta coccoides DSM 17374 inner-membrane translocator YP_004412162.1 1872985 R 760011 CDS YP_004412163.1 330837522 10495904 complement(1873885..1874757) 1 NC_015436.1 COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: amt:Amet_2075 inner-membrane translocator; PFAM: ABC transporter permease; SPTR: uncharacterized protein; IMG reference gene:2503957893; PFAM: Branched-chain amino acid transport system / permease component; inner-membrane translocator 1874757 10495904 Spico_1579 Sphaerochaeta coccoides DSM 17374 inner-membrane translocator YP_004412163.1 1873885 R 760011 CDS YP_004412164.1 330837523 10495905 complement(1874863..1876026) 1 NC_015436.1 COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: amt:Amet_2074 extracellular ligand-binding receptor; PFAM: Extracellular ligand-binding receptor; SPTR: uncharacterized protein; IMG reference gene:2503957894; PFAM: Receptor family ligand binding region; ABC transporter substrate-binding protein 1876026 10495905 Spico_1580 Sphaerochaeta coccoides DSM 17374 ABC transporter substrate-binding protein YP_004412164.1 1874863 R 760011 CDS YP_004412165.1 330837524 10495906 complement(1876288..1877115) 1 NC_015436.1 COGs: COG0656 Aldo/keto reductase related to diketogulonate reductase; InterPro IPR023210; KEGG: gtn:GTNG_0505 aldo/keto reductase oxidoreductase; PFAM: NADP-dependent oxidoreductase domain; PRIAM: Methylglyoxal reductase (NADPH-dependent); SPTR: 2,5-didehydrogluconate reductase; manually curated; IMG reference gene:2503957895; PFAM: Aldo/keto reductase; methylglyoxal reductase 1877115 10495906 Spico_1581 Sphaerochaeta coccoides DSM 17374 methylglyoxal reductase YP_004412165.1 1876288 R 760011 CDS YP_004412166.1 330837525 10495907 1877344..1878180 1 NC_015436.1 COGs: COG1692 conserved hypothetical protein; KEGG: ssm:Spirs_4037 hypothetical protein; SPTR: Metallophosphoesterase; manually curated; IMG reference gene:2503957896; TIGRFAM: metallophosphoesterase, MG_246/BB_0505 family; hypothetical protein 1878180 10495907 Spico_1582 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412166.1 1877344 D 760011 CDS YP_004412167.1 330837526 10495908 1878268..1878882 1 NC_015436.1 InterPro IPR010664; KEGG: apb:SAR116_1245 hypothetical protein; PFAM: Lipopolysccharide assembly, LptC-related; SPTR: OstA family protein; IMG reference gene:2503957897; PFAM: Protein of unknown function (DUF1239); hypothetical protein 1878882 10495908 Spico_1583 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412167.1 1878268 D 760011 CDS YP_004412168.1 330837527 10495909 1878879..1879514 1 NC_015436.1 KEGG: ssm:Spirs_4046 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957898; PFAM: Protein of unknown function (DUF1239); hypothetical protein 1879514 10495909 Spico_1584 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412168.1 1878879 D 760011 CDS YP_004412169.1 330837528 10495910 1879507..1880250 1 NC_015436.1 COGs: COG1137 ABC-type (unclassified) transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: sta:STHERM_c21930 transporter; PFAM: ABC transporter-like; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Transporter; IMG reference gene:2503957899; PFAM: ABC transporter; Fe(3+)-transporting ATPase 1880250 10495910 Spico_1585 Sphaerochaeta coccoides DSM 17374 Fe(3+)-transporting ATPase YP_004412169.1 1879507 D 760011 CDS YP_004412170.1 330837529 10495911 1880198..1881703 1 NC_015436.1 COGs: COG1508 DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog; InterPro IPR000394:IPR007046:IPR007634; KEGG: ssm:Spirs_4048 RNA polymerase, sigma 54 subunit, RpoN; PFAM: RNA polymerase sigma factor 54, DNA-binding; RNA polymerase sigma factor 54, core-binding; RNA polymerase sigma factor 54; SPTR: RNA polymerase sigma-54 factor; TIGRFAM: RNA polymerase sigma factor 54; IMG reference gene:2503957900; PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54, DNA binding domain; Sigma-54 factor, core binding domain; TIGRFAM: RNA polymerase sigma-54 factor; RNA polymerase sigma 54 subunit RpoN 1881703 10495911 Spico_1586 Sphaerochaeta coccoides DSM 17374 RNA polymerase sigma 54 subunit RpoN YP_004412170.1 1880198 D 760011 CDS YP_004412171.1 330837530 10495912 1881865..1882161 1 NC_015436.1 KEGG: ssm:Spirs_4049 ribosomal subunit interface protein; SPTR: uncharacterized protein; IMG reference gene:2503957901; PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein; ribosomal subunit interface protein 1882161 10495912 Spico_1587 Sphaerochaeta coccoides DSM 17374 ribosomal subunit interface protein YP_004412171.1 1881865 D 760011 CDS YP_004412172.1 330837531 10495913 1882307..1883284 1 NC_015436.1 COGs: COG1493 Serine kinase of the HPr protein regulates carbohydrate metabolism; HAMAP: Signal transduction serine kinase/phosphorylase, HPr(Ser) kinase; InterPro IPR003755:IPR011126:IPR011104; KEGG: ssm:Spirs_4050 HPr kinase; PFAM: Signal transduction serine kinase/phosphorylase, HPr(Ser) kinase, C-terminal; Signal transduction serine kinase/phosphorylase, HPr(Ser) kinase, N-terminal; SPTR: HPr kinase; TIGRFAM: Signal transduction serine kinase/phosphorylase, HPr(Ser) kinase; IMG reference gene:2503957902; PFAM: HPr Serine kinase N terminus; HPr Serine kinase C-terminal domain; TIGRFAM: Hpr(Ser) kinase/phosphatase; Hpr(Ser) kinase/phosphatase 1883284 10495913 Spico_1588 Sphaerochaeta coccoides DSM 17374 Hpr(Ser) kinase/phosphatase YP_004412172.1 1882307 D 760011 CDS YP_004412173.1 330837532 10495914 1883284..1883547 1 NC_015436.1 COGs: COG1925 Phosphotransferase system HPr-related protein; InterPro IPR005698; KEGG: ssm:Spirs_4051 phosphotransferase system, phosphocarrier protein HPr; PFAM: Phosphotransferase system, phosphocarrier HPr protein; SPTR: Phosphocarrier protein HPr; TIGRFAM: Phosphotransferase system, phosphocarrier HPr protein; IMG reference gene:2503957903; PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family; phosphotransferase system, phosphocarrier protein HPr 1883547 10495914 Spico_1589 Sphaerochaeta coccoides DSM 17374 phosphotransferase system, phosphocarrier protein HPr YP_004412173.1 1883284 D 760011 CDS YP_004412174.1 330837533 10495915 1883560..1884189 1 NC_015436.1 COGs: COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidase); HAMAP: Peptidase S24, LexA repressor; InterPro IPR006200:IPR006199:IPR019759; KEGG: ssm:Spirs_4055 transcriptional repressor, LexA family; PFAM: LexA, DNA-binding domain; Peptidase S24/S26A/S26B, conserved region; SPTR: Transcriptional repressor; TIGRFAM: Peptidase S24, LexA repressor; IMG reference gene:2503957904; PFAM: LexA DNA binding domain; Peptidase S24-like; TIGRFAM: SOS regulatory protein LexA; SOS-response transcriptional repressor, LexA 1884189 10495915 Spico_1590 Sphaerochaeta coccoides DSM 17374 SOS-response transcriptional repressor, LexA YP_004412174.1 1883560 D 760011 CDS YP_004412175.1 330837534 10495916 1884186..1885256 1 NC_015436.1 COGs: COG1466 DNA polymerase III delta subunit; InterPro IPR010372; KEGG: ssm:Spirs_4056 DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta; SPTR: uncharacterized protein; IMG reference gene:2503957905; PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; DNA polymerase III subunit delta 1885256 10495916 Spico_1591 Sphaerochaeta coccoides DSM 17374 DNA polymerase III subunit delta YP_004412175.1 1884186 D 760011 CDS YP_004412176.1 330837535 10495917 complement(1885323..1887158) 1 NC_015436.1 COGs: COG0322 Nuclease subunit of the excinuclease complex; HAMAP: Excinuclease ABC, C subunit; InterPro IPR004791:IPR000305:IPR001943:IPR001162; KEGG: ssm:Spirs_4068 excinuclease ABC, C subunit; PFAM: Excinuclease ABC, C subunit, C-terminal; Excinuclease ABC, C subunit, N-terminal; UvrB/UvrC protein; SMART: Excinuclease ABC, C subunit, N-terminal; SPTR: UvrABC system protein C; TIGRFAM: Excinuclease ABC, C subunit; IMG reference gene:2503957906; PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit; UvrABC system protein C 1887158 10495917 Spico_1592 Sphaerochaeta coccoides DSM 17374 UvrABC system protein C YP_004412176.1 1885323 R 760011 CDS YP_004412177.1 330837536 10495918 1887547..1888518 1 NC_015436.1 KEGG: sta:STHERM_c17700 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957907; hypothetical protein 1888518 10495918 Spico_1593 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412177.1 1887547 D 760011 CDS YP_004412178.1 330837537 10495919 complement(1888531..1889352) 1 NC_015436.1 COGs: COG1351 alternative thymidylate synthase; HAMAP: Thymidylate synthase ThyX; InterPro IPR003669; KEGG: sta:STHERM_c22080 hypothetical protein; PFAM: Thymidylate synthase ThyX; SPTR: uncharacterized protein; TIGRFAM: Thymidylate synthase ThyX; IMG reference gene:2503957908; PFAM: Thymidylate synthase complementing protein; TIGRFAM: thymidylate synthase, flavin-dependent; thymidylate synthase 1889352 10495919 Spico_1594 Sphaerochaeta coccoides DSM 17374 thymidylate synthase YP_004412178.1 1888531 R 760011 CDS YP_004412179.1 330837538 10495920 complement(1889506..1890231) 1 NC_015436.1 COGs: COG1385 conserved hypothetical protein; InterPro IPR006700; KEGG: ssm:Spirs_4109 protein of unknown function DUF558; PFAM: Ribosomal RNA small subunit methyltransferase E; SPTR: uncharacterized protein; TIGRFAM: Ribosomal RNA small subunit methyltransferase E; IMG reference gene:2503957909; PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family; Ribosomal RNA small subunit methyltransferase E 1890231 10495920 Spico_1595 Sphaerochaeta coccoides DSM 17374 Ribosomal RNA small subunit methyltransferase E YP_004412179.1 1889506 R 760011 CDS YP_004412180.1 330837539 10495921 1890364..1891989 1 NC_015436.1 COGs: COG4166 ABC-type oligopeptide transport system periplasmic component; InterPro IPR000914; KEGG: ssm:Spirs_4114 extracellular solute-binding protein family 5; PFAM: Bacterial extracellular solute-binding protein, family 5; SPTR: Bacterial extracellular solute-binding protein, family 5; IMG reference gene:2503957910; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; ABC transporter substrate-binding protein 1891989 10495921 Spico_1596 Sphaerochaeta coccoides DSM 17374 ABC transporter substrate-binding protein YP_004412180.1 1890364 D 760011 CDS YP_004412181.1 330837540 10495922 complement(1891973..1893505) 1 NC_015436.1 COGs: COG1640 4-alpha-glucanotransferase; InterPro IPR003385; KEGG: ssm:Spirs_4115 4-alpha-glucanotransferase; PFAM: Glycoside hydrolase, family 77; PRIAM: 4-alpha-glucanotransferase; SPTR: 4-alpha-glucanotransferase; TIGRFAM: Glycoside hydrolase, family 77; IMG reference gene:2503957911; PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; 4-alpha-glucanotransferase 1893505 10495922 Spico_1597 Sphaerochaeta coccoides DSM 17374 4-alpha-glucanotransferase YP_004412181.1 1891973 R 760011 CDS YP_004412182.1 330837541 10495923 1893619..1894104 1 NC_015436.1 COGs: COG1329 Transcriptional regulators similar to M. xanthus CarD; InterPro IPR003711; KEGG: ssm:Spirs_4116 transcriptional regulator, CarD family; PFAM: Transcription factor CarD; SPTR: Transcriptional regulatory protein; IMG reference gene:2503957912; PFAM: CarD-like/TRCF domain; CarD family transcriptional regulator 1894104 10495923 Spico_1598 Sphaerochaeta coccoides DSM 17374 CarD family transcriptional regulator YP_004412182.1 1893619 D 760011 CDS YP_004412183.1 330837542 10495924 1894108..1894986 1 NC_015436.1 COGs: COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase; InterPro IPR001228; KEGG: ssm:Spirs_4117 4-diphosphocytidyl-2C-methyl-D-erythritolsynthas E; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; SPTR: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; IMG reference gene:2503957913; PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase 1894986 10495924 Spico_1599 Sphaerochaeta coccoides DSM 17374 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_004412183.1 1894108 D 760011 CDS YP_004412184.1 330837543 10495925 1894967..1895488 1 NC_015436.1 COGs: COG0245 2C-methyl-D-erythritol 2 4-cyclodiphosphate synthase; HAMAP: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; InterPro IPR003526; KEGG: ssm:Spirs_4118 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; PRIAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; SPTR: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; IMG reference gene:2503957914; PFAM: YgbB family; TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase 1895488 10495925 Spico_1600 Sphaerochaeta coccoides DSM 17374 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase YP_004412184.1 1894967 D 760011 CDS YP_004412185.1 330837544 10495926 complement(1895562..1896269) 1 NC_015436.1 KEGG: ssm:Spirs_4125 hypothetical protein; SPTR: cytoplasmic protein; IMG reference gene:2503957915; hypothetical protein 1896269 10495926 Spico_1601 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412185.1 1895562 R 760011 CDS YP_004412186.1 330837545 10495928 1896861..1897250 1 NC_015436.1 COGs: COG3943 Virulence protein; KEGG: clo:HMPREF0868_1371 hypothetical protein; SPTR: Toxin-antitoxin system, toxin component, Fic family; IMG reference gene:2503957917; hypothetical protein 1897250 10495928 Spico_1603 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412186.1 1896861 D 760011 CDS YP_004412187.1 330837546 10495929 complement(1897378..1899495) 1 NC_015436.1 COGs: COG0480 Translation elongation factors (GTPase); InterProIPR004540:IPR005225:IPR000795:IPR004161:IPR 005517:IPR000640; KEGG: ssm:Spirs_4126 translation elongation factor G; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; SMART: Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; SPTR: Translation elongation factor G; TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; IMG reference gene:2503957918; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; translation elongation factor 2 (EF-2/EF-G) 1899495 10495929 Spico_1604 Sphaerochaeta coccoides DSM 17374 translation elongation factor 2 (EF-2/EF-G) YP_004412187.1 1897378 R 760011 CDS YP_004412188.1 330837547 10495930 1900021..1901358 1 NC_015436.1 COGs: COG2233 Xanthine/uracil permease; InterPro IPR006043; KEGG: acl:ACL_1377 xanthine/uracil/vitamin C permease; PFAM: Xanthine/uracil/vitamin C permease; SPTR: Xanthine/uracil/vitamin C permease; IMG reference gene:2503957919; PFAM: Permease; TIGRFAM: uracil-xanthine permease; xanthine/uracil/vitamin C permease 1901358 10495930 Spico_1605 Sphaerochaeta coccoides DSM 17374 xanthine/uracil/vitamin C permease YP_004412188.1 1900021 D 760011 CDS YP_004412189.1 330837548 10495931 1901733..1902590 1 NC_015436.1 InterPro IPR002864; KEGG: dvm:DvMF_1428 acyl-ACP thioesterase; PFAM: Acyl-ACP thioesterase; SPTR: Acyl-ACP thioesterase; IMG reference gene:2503957920; PFAM: Acyl-ACP thioesterase; acyl-ACP thioesterase 1902590 10495931 Spico_1606 Sphaerochaeta coccoides DSM 17374 acyl-ACP thioesterase YP_004412189.1 1901733 D 760011 CDS YP_004412190.1 330837549 10495932 1902886..1903773 1 NC_015436.1 COGs: COG3588 Fructose-1 6-bisphosphate aldolase; InterPro IPR000741; KEGG: fjo:Fjoh_0953 fructose-1,6-bisphosphate aldolase; PFAM: Fructose-bisphosphate aldolase, class-I; SPTR: Fructose-bisphosphate aldolase class 1; IMG reference gene:2503957921; PFAM: Fructose-bisphosphate aldolase class-I; fructose-bisphosphate aldolase 1903773 10495932 Spico_1607 Sphaerochaeta coccoides DSM 17374 fructose-bisphosphate aldolase YP_004412190.1 1902886 D 760011 CDS YP_004412191.1 330837550 10495933 1904076..1906358 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; IMG reference gene:2503957922; PFAM: Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 1906358 10495933 Spico_1608 Sphaerochaeta coccoides DSM 17374 chromosome condensation regulator RCC1 YP_004412191.1 1904076 D 760011 CDS YP_004412192.1 330837551 10495934 1906758..1907609 1 NC_015436.1 COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: dfe:Dfer_5189 ABC transporter related; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; IMG reference gene:2503957923; PFAM: ABC transporter; ABC transporter 1907609 10495934 Spico_1609 Sphaerochaeta coccoides DSM 17374 ABC transporter YP_004412192.1 1906758 D 760011 CDS YP_004412193.1 330837552 10495935 1907606..1908382 1 NC_015436.1 KEGG: ssm:Spirs_3164 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957924; hypothetical protein 1908382 10495935 Spico_1610 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412193.1 1907606 D 760011 CDS YP_004412194.1 330837553 10495936 1908372..1908809 1 NC_015436.1 COGs: COG1725 transcriptional regulator protein; InterPro IPR000524; KEGG: ssm:Spirs_3163 transcriptional regulator, GntR family; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; SPTR: GntR family transcriptional regulator; IMG reference gene:2503957925; PFAM: Bacterial regulatory proteins, gntR family; GntR family transcriptional regulator 1908809 10495936 Spico_1611 Sphaerochaeta coccoides DSM 17374 GntR family transcriptional regulator YP_004412194.1 1908372 D 760011 CDS YP_004412195.1 330837554 10495937 1908790..1908993 1 NC_015436.1 IMG reference gene:2503957926; hypothetical protein 1908993 10495937 Spico_1612 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412195.1 1908790 D 760011 CDS YP_004412196.1 330837555 10495938 complement(1909053..1912325) 1 NC_015436.1 COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006104:IPR006102:IPR006103:IPR004199; KEGG: rca:Rcas_2493 beta-galactosidase; PFAM: Glycoside hydrolase, family 2, TIM barrel; Glycoside hydrolase, family 2, carbohydrate-binding; Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich; Glycoside hydrolase, family 42, domain 5; SPTR: Beta-galactosidase; IMG reference gene:2503957927; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Beta galactosidase small chain; Glycosyl hydrolases family 2, sugar binding domain; glycoside hydrolase 2 TIM barrel 1912325 10495938 Spico_1613 Sphaerochaeta coccoides DSM 17374 glycoside hydrolase 2 TIM barrel YP_004412196.1 1909053 R 760011 CDS YP_004412197.1 330837556 10495940 1912851..1913906 1 NC_015436.1 COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase; InterPro IPR013154:IPR013149:IPR020843; KEGG: clo:HMPREF0868_1158 GroES-like protein; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; PRIAM: Alcohol dehydrogenase (NADP(+)); SMART: Polyketide synthase, enoylreductase; SPTR: uncharacterized protein; IMG reference gene:2503957929; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; alcohol dehydrogenase 1913906 10495940 Spico_1615 Sphaerochaeta coccoides DSM 17374 alcohol dehydrogenase YP_004412197.1 1912851 D 760011 CDS YP_004412198.1 330837557 10495941 1913974..1914933 1 NC_015436.1 COGs: COG0523 GTPase (G3E family); InterPro IPR003495; KEGG: apv:Apar_1227 cobalamin synthesis protein P47K; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; SPTR: CobW/P47K family protein; IMG reference gene:2503957930; PFAM: CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain; cobalamin synthesis protein P47K 1914933 10495941 Spico_1616 Sphaerochaeta coccoides DSM 17374 cobalamin synthesis protein P47K YP_004412198.1 1913974 D 760011 CDS YP_004412199.1 330837558 10495942 1915025..1916095 1 NC_015436.1 COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR005786:IPR001544; KEGG: cac:CA_C1479 branched-chain amino acid aminotransferase; PFAM: Aminotransferase, class IV; PRIAM: Branched-chain-amino-acid transaminase; SPTR: Branched-chain amino acid aminotransferase, group II; TIGRFAM: Branched-chain amino acid aminotransferase II; IMG reference gene:2503957931; PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group II; branched-chain amino acid aminotransferase 1916095 10495942 Spico_1617 Sphaerochaeta coccoides DSM 17374 branched-chain amino acid aminotransferase YP_004412199.1 1915025 D 760011 CDS YP_004412200.1 330837559 10495944 1917062..1917697 1 NC_015436.1 InterPro IPR001647; KEGG: bha:BH0719 TetR/AcrR family transcriptional regulator; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator; IMG reference gene:2503957933; PFAM: Bacterial regulatory proteins, tetR family; TetR family transcriptional regulator 1917697 10495944 Spico_1619 Sphaerochaeta coccoides DSM 17374 TetR family transcriptional regulator YP_004412200.1 1917062 D 760011 CDS YP_004412201.1 330837560 10495945 complement(1917725..1918915) 1 NC_015436.1 COGs: COG1171 Threonine dehydratase; InterPro IPR005789:IPR001926:IPR002912; KEGG: bvu:BVU_3892 threonine dehydratase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Amino acid-binding ACT; SPTR: uncharacterized protein; TIGRFAM: Threonine dehydratase II; IMG reference gene:2503957934; PFAM: ACT domain; Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine dehydratase, medium form; L-threonine ammonia-lyase 1918915 10495945 Spico_1620 Sphaerochaeta coccoides DSM 17374 L-threonine ammonia-lyase YP_004412201.1 1917725 R 760011 CDS YP_004412202.1 330837561 10495946 1919433..1920107 1 NC_015436.1 InterPro IPR002187; KEGG: chy:CHY_1194 PII family protein; SMART: Nitrogen regulatory protein PII; SPTR: Regulatory protein, P-II family; IMG reference gene:2503957935; nitrogen regulatory protein P-II 1920107 10495946 Spico_1621 Sphaerochaeta coccoides DSM 17374 nitrogen regulatory protein P-II YP_004412202.1 1919433 D 760011 CDS YP_004412203.1 330837562 10495947 1920196..1921176 1 NC_015436.1 COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: tte:TTE0761 transcriptional regulator; PFAM: ROK; PRIAM: Glucokinase; SPTR: uncharacterized protein; IMG reference gene:2503957936; PFAM: ROK family; glucokinase 1921176 10495947 Spico_1622 Sphaerochaeta coccoides DSM 17374 glucokinase YP_004412203.1 1920196 D 760011 CDS YP_004412204.1 330837563 10495948 1921178..1921822 1 NC_015436.1 COGs: COG0279 Phosphoheptose isomerase; InterPro IPR001347; KEGG: csh:Closa_3796 sugar isomerase (SIS); PFAM: Sugar isomerase (SIS); SPTR: uncharacterized protein; IMG reference gene:2503957937; PFAM: SIS domain; sugar isomerase (SIS) 1921822 10495948 Spico_1623 Sphaerochaeta coccoides DSM 17374 sugar isomerase (SIS) YP_004412204.1 1921178 D 760011 CDS YP_004412205.1 330837564 10495949 1921849..1923477 1 NC_015436.1 COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR001789:IPR000005:IPR018060; KEGG: ssm:Spirs_2649 two component transcriptional regulator, AraC family; PFAM: Signal transduction response regulator, receiver domain; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; Signal transduction response regulator, receiver domain; SPTR: Two component transcriptional regulator, AraC family; IMG reference gene:2503957938; PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator 1923477 10495949 Spico_1624 Sphaerochaeta coccoides DSM 17374 AraC family transcriptional regulator YP_004412205.1 1921849 D 760011 CDS YP_004412206.1 330837565 10495950 1923474..1924526 1 NC_015436.1 COGs: COG2972 signal transduction protein with a C-terminal ATPase domain; InterPro IPR010559:IPR003594; KEGG: ssm:Spirs_2648 integral membrane sensor signal transduction histidine kinase; PFAM: Signal transduction histidine kinase, internal region; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; SPTR: uncharacterized protein; IMG reference gene:2503957939; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; integral membrane sensor signal transduction histidine kinase 1924526 10495950 Spico_1625 Sphaerochaeta coccoides DSM 17374 integral membrane sensor signal transduction histidine kinase YP_004412206.1 1923474 D 760011 CDS YP_004412207.1 330837566 10495951 1924523..1926004 1 NC_015436.1 COGs: COG1129 ABC-type sugar transport system ATPase component; KEGG: ssm:Spirs_2647 monosaccharide-transporting ATPase; SPTR: uncharacterized protein; IMG reference gene:2503957940; monosaccharide-transporting ATPase 1926004 10495951 Spico_1626 Sphaerochaeta coccoides DSM 17374 monosaccharide-transporting ATPase YP_004412207.1 1924523 D 760011 CDS YP_004412208.1 330837567 10495952 1926159..1927670 1 NC_015436.1 COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: ssm:Spirs_2646 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: uncharacterized protein; IMG reference gene:2503957941; PFAM: ABC transporter; monosaccharide ABC transporter ATP-binding protein, CUT2 family 1927670 10495952 Spico_1627 Sphaerochaeta coccoides DSM 17374 monosaccharide ABC transporter ATP-binding protein, CUT2 family YP_004412208.1 1926159 D 760011 CDS YP_004412209.1 330837568 10495953 1927691..1928713 1 NC_015436.1 COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: ssm:Spirs_2645 inner-membrane translocator; PFAM: ABC transporter permease; SPTR: Inner-membrane translocator; IMG reference gene:2503957942; PFAM: Branched-chain amino acid transport system / permease component; monosaccharide ABC transporter membrane protein, CUT2 family 1928713 10495953 Spico_1628 Sphaerochaeta coccoides DSM 17374 monosaccharide ABC transporter membrane protein, CUT2 family YP_004412209.1 1927691 D 760011 CDS YP_004412210.1 330837569 10495954 1928762..1929688 1 NC_015436.1 COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR001761; KEGG: ssm:Spirs_2644 periplasmic binding protein/LacI transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; SPTR: Periplasmic binding protein/LacI transcriptional regulator; IMG reference gene:2503957943; PFAM: family; monosaccharide ABC transporter substrate-binding protein, CUT2 family 1929688 10495954 Spico_1629 Sphaerochaeta coccoides DSM 17374 monosaccharide ABC transporter substrate-binding protein, CUT2 family YP_004412210.1 1928762 D 760011 CDS YP_004412211.1 330837570 10495955 1929864..1930574 1 NC_015436.1 InterPro IPR001087; KEGG: bld:BLi04100 hypothetical protein; PFAM: Lipase, GDSL; SPTR: uncharacterized protein; IMG reference gene:2503957944; PFAM: GDSL-like Lipase/Acylhydrolase; G-D-S-L family lipolytic protein 1930574 10495955 Spico_1630 Sphaerochaeta coccoides DSM 17374 G-D-S-L family lipolytic protein YP_004412211.1 1929864 D 760011 CDS YP_004412212.1 330837571 10495956 1930658..1931284 1 NC_015436.1 COGs: COG0406 Fructose-2 6-bisphosphatase; InterPro IPR013078; KEGG: ssm:Spirs_1093 phosphoglycerate mutase; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1; SPTR: Alpha-ribazole-5-phosphate phosphatase; IMG reference gene:2503957945; PFAM: Phosphoglycerate mutase; phosphoglycerate mutase 1931284 10495956 Spico_1631 Sphaerochaeta coccoides DSM 17374 phosphoglycerate mutase YP_004412212.1 1930658 D 760011 CDS YP_004412213.1 330837572 10495957 1931368..1932315 1 NC_015436.1 COGs: COG4866 conserved hypothetical protein; KEGG: sta:STHERM_c02850 ABC transporter permease; SPTR: ABC transporter, permease; IMG reference gene:2503957946; PFAM: Uncharacterized conserved protein (DUF2156); ABC transporter permease 1932315 10495957 Spico_1632 Sphaerochaeta coccoides DSM 17374 ABC transporter permease YP_004412213.1 1931368 D 760011 CDS YP_004412214.1 330837573 10495959 1933313..1934827 1 NC_015436.1 InterPro IPR000073; KEGG: kko:Kkor_1814 alpha/beta hydrolase fold protein; PFAM: Alpha/beta hydrolase fold-1; SPTR: Hydrolase, alpha/beta domain protein; IMG reference gene:2503957948; PFAM: X-Pro dipeptidyl-peptidase (S15 family); alpha/beta hydrolase 1934827 10495959 Spico_1634 Sphaerochaeta coccoides DSM 17374 alpha/beta hydrolase YP_004412214.1 1933313 D 760011 CDS YP_004412215.1 330837574 10495960 1934932..1935783 1 NC_015436.1 COGs: COG1387 Histidinol phosphatase and related hydrolase of the PHP family; InterPro IPR010140:IPR004013; KEGG: ssm:Spirs_0453 histidinol phosphate phosphatase HisJ family; PFAM: PHP, C-terminal; SPTR: Probable histidinol-phosphatase; TIGRFAM: Histidinol phosphate phosphatase, HisJ; IMG reference gene:2503957949; PFAM: PHP domain; TIGRFAM: histidinol phosphate phosphatase HisJ family; HisJ family histidinol phosphate phosphatase 1935783 10495960 Spico_1635 Sphaerochaeta coccoides DSM 17374 HisJ family histidinol phosphate phosphatase YP_004412215.1 1934932 D 760011 CDS YP_004412216.1 330837575 10495961 1935981..1936733 1 NC_015436.1 COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: hor:Hore_14700 transcriptional regulator, TetR family; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family; IMG reference gene:2503957950; PFAM: Bacterial regulatory proteins, tetR family; TetR family transcriptional regulator 1936733 10495961 Spico_1636 Sphaerochaeta coccoides DSM 17374 TetR family transcriptional regulator YP_004412216.1 1935981 D 760011 CDS YP_004412217.1 330837576 10495962 1936717..1939329 1 NC_015436.1 COGs: COG0474 Cation transport ATPase; InterProIPR006408:IPR001757:IPR004014:IPR008250:IPR 005834:IPR006068; KEGG: swo:Swol_0623 cation transporting ATPase-like protein; PFAM: ATPase, P-type, ATPase-associated domain; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal; PRIAM: Calcium-transporting ATPase; SMART: ATPase, P-type cation-transporter, N-terminal; SPTR: Cation transporting ATPase-like protein; TIGRFAM: ATPase, P-type, calcium-transporting, PMCA-type; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; IMG reference gene:2503957951; PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; calcium-translocating P-type ATPase 1939329 10495962 Spico_1637 Sphaerochaeta coccoides DSM 17374 calcium-translocating P-type ATPase YP_004412217.1 1936717 D 760011 CDS YP_004412218.1 330837577 10495963 complement(1939429..1939920) 1 NC_015436.1 KEGG: fjo:Fjoh_3952 hypothetical protein; SPTR: Conserved repeat domain protein; IMG reference gene:2503957952; hypothetical protein 1939920 10495963 Spico_1638 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412218.1 1939429 R 760011 CDS YP_004412219.1 330837578 10495964 complement(1939920..1941578) 1 NC_015436.1 KEGG: bfr:BF3846 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957953; hypothetical protein 1941578 10495964 Spico_1639 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412219.1 1939920 R 760011 CDS YP_004412220.1 330837579 10495965 complement(1941793..1942803) 1 NC_015436.1 KEGG: bfr:BF3847 hypothetical protein; SPTR: lipoprotein; IMG reference gene:2503957954; hypothetical protein 1942803 10495965 Spico_1640 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412220.1 1941793 R 760011 CDS YP_004412221.1 330837580 10495966 1943263..1945068 1 NC_015436.1 COGs: COG5421 Transposase; InterPro IPR002559; KEGG: cob:COB47_1677 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; IMG reference gene:2503957955; PFAM: Transposase DDE domain; transposase IS4 family protein 1945068 10495966 Spico_1641 Sphaerochaeta coccoides DSM 17374 transposase IS4 family protein YP_004412221.1 1943263 D 760011 CDS YP_004412222.1 330837581 10495967 1945485..1947071 1 NC_015436.1 COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792; KEGG: ssm:Spirs_3043 transcriptional regulator, LuxR family; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; SPTR: two-component response regulator; membrane protein; signal peptide; IMG reference gene:2503957956; PFAM: Bacterial regulatory proteins, luxR family; LuxR family transcriptional regulator 1947071 10495967 Spico_1642 Sphaerochaeta coccoides DSM 17374 LuxR family transcriptional regulator YP_004412222.1 1945485 D 760011 CDS YP_004412223.1 330837582 10495968 complement(1947154..1948110) 1 NC_015436.1 COGs: COG0039 Malate/lactate dehydrogenase; HAMAP: L-lactate dehydrogenase; InterPro IPR011304:IPR001236:IPR022383; KEGG: cth:Cthe_0345 malate dehydrogenase (NAD); PFAM: Lactate/malate dehydrogenase, N-terminal; Lactate/malate dehydrogenase, C-terminal; PRIAM: L-lactate dehydrogenase; SPTR: L-lactate dehydrogenase; TIGRFAM: L-lactate dehydrogenase; IMG reference gene:2503957957; PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: L-lactate dehydrogenase; L-lactate dehydrogenase 1948110 10495968 Spico_1643 Sphaerochaeta coccoides DSM 17374 L-lactate dehydrogenase YP_004412223.1 1947154 R 760011 CDS YP_004412224.1 330837583 10495969 complement(1948495..1949589) 1 NC_015436.1 COGs: COG1879 ABC-type sugar transport system periplasmic component; KEGG: cpy:Cphy_2012 periplasmic binding protein/LacI transcriptional regulator; SPTR: uncharacterized protein; IMG reference gene:2503957958; periplasmic binding protein/LacI transcriptional regulator 1949589 10495969 Spico_1644 Sphaerochaeta coccoides DSM 17374 periplasmic binding protein/LacI transcriptional regulator YP_004412224.1 1948495 R 760011 CDS YP_004412225.1 330837584 10495970 complement(1949653..1950885) 1 NC_015436.1 COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: cpy:Cphy_2011 monosaccharide-transporting ATPase; PFAM: ABC transporter permease; SPTR: Inner-membrane translocator; IMG reference gene:2503957959; PFAM: Branched-chain amino acid transport system / permease component; monosaccharide ABC transporter membrane protein, CUT2 family 1950885 10495970 Spico_1645 Sphaerochaeta coccoides DSM 17374 monosaccharide ABC transporter membrane protein, CUT2 family YP_004412225.1 1949653 R 760011 CDS YP_004412226.1 330837585 10495971 complement(1950966..1952465) 1 NC_015436.1 COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: cpy:Cphy_2010 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: uncharacterized protein; IMG reference gene:2503957960; PFAM: ABC transporter; monosaccharide ABC transporter ATP-binding protein, CUT2 family 1952465 10495971 Spico_1646 Sphaerochaeta coccoides DSM 17374 monosaccharide ABC transporter ATP-binding protein, CUT2 family YP_004412226.1 1950966 R 760011 CDS YP_004412227.1 330837586 10495972 complement(1952601..1954043) 1 NC_015436.1 COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484; KEGG: gym:GYMC10_3922 carbohydrate kinase, FGGY-like protein; PFAM: Carbohydrate kinase, FGGY, N-terminal; PRIAM: Rhamnulokinase; SPTR: Carbohydrate kinase, FGGY-like protein; IMG reference gene:2503957961; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; Rhamnulokinase 1954043 10495972 Spico_1647 Sphaerochaeta coccoides DSM 17374 Rhamnulokinase YP_004412227.1 1952601 R 760011 CDS YP_004412228.1 330837587 10495973 complement(1954170..1955435) 1 NC_015436.1 COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase; InterPro IPR013154:IPR013149; KEGG: csc:Csac_0869 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; SPTR: Alcohol dehydrogenase, zinc-binding domain protein; IMG reference gene:2503957962; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; alcohol dehydrogenase 1955435 10495973 Spico_1648 Sphaerochaeta coccoides DSM 17374 alcohol dehydrogenase YP_004412228.1 1954170 R 760011 CDS YP_004412229.1 330837588 10495974 complement(1955461..1956660) 1 NC_015436.1 COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: sta:STHERM_c08270 hypothetical protein; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: uncharacterized protein; IMG reference gene:2503957963; PFAM: short chain dehydrogenase; 3-oxoacyl-ACP reductase 1956660 10495974 Spico_1649 Sphaerochaeta coccoides DSM 17374 3-oxoacyl-ACP reductase YP_004412229.1 1955461 R 760011 CDS YP_004412230.1 330837589 10495975 complement(1956743..1958089) 1 NC_015436.1 KEGG: sta:STHERM_c08260 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957964; hypothetical protein 1958089 10495975 Spico_1650 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412230.1 1956743 R 760011 CDS YP_004412231.1 330837590 10495976 complement(1958125..1960581) 1 NC_015436.1 COGs: COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit; InterPro IPR001017:IPR005475:IPR005476; KEGG: sta:STHERM_c08250 dehydrogenase, fusion; PFAM: Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component; Transketolase, C-terminal; PRIAM: Pyruvate dehydrogenase (acetyl-transferring); SMART: Transketolase-like, pyrimidine-binding domain; SPTR: dehydrogenase, fusion; IMG reference gene:2503957965; PFAM: Dehydrogenase E1 component; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; pyruvate dehydrogenase 1960581 10495976 Spico_1651 Sphaerochaeta coccoides DSM 17374 pyruvate dehydrogenase YP_004412231.1 1958125 R 760011 CDS YP_004412232.1 330837591 10495977 complement(1960720..1962072) 1 NC_015436.1 COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR006258:IPR013027:IPR004099; KEGG: csc:Csac_0873 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; PRIAM: Dihydrolipoyl dehydrogenase; SPTR: Dihydrolipoyl dehydrogenase; TIGRFAM: Dihydrolipoamide dehydrogenase; IMG reference gene:2503957966; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase 1962072 10495977 Spico_1652 Sphaerochaeta coccoides DSM 17374 dihydrolipoamide dehydrogenase YP_004412232.1 1960720 R 760011 CDS YP_004412233.1 330837592 10495978 complement(1962084..1963520) 1 NC_015436.1 COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterPro IPR000089:IPR004167:IPR001078; KEGG: csc:Csac_0872 dehydrogenase catalytic domain-containing protein; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; PRIAM: Dihydrolipoyllysine-residue acetyltransferase; SPTR: uncharacterized protein; IMG reference gene:2503957967; PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; Dihydrolipoyllysine-residue acetyltransferase 1963520 10495978 Spico_1653 Sphaerochaeta coccoides DSM 17374 Dihydrolipoyllysine-residue acetyltransferase YP_004412233.1 1962084 R 760011 CDS YP_004412234.1 330837593 10495979 complement(1963568..1964323) 1 NC_015436.1 COGs: COG1349 Transcriptional regulators of sugar metabolism; InterPro IPR001034:IPR014036; KEGG: sta:STHERM_c08230 transcriptional regulatory protein; PFAM: HTH transcriptional regulator, DeoR; HTH transcriptional regulator, DeoR N-terminal; SMART: HTH transcriptional regulator, DeoR N-terminal; SPTR: Transcriptional regulatory protein; IMG reference gene:2503957968; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain; DeoR family transcriptional regulator 1964323 10495979 Spico_1654 Sphaerochaeta coccoides DSM 17374 DeoR family transcriptional regulator YP_004412234.1 1963568 R 760011 CDS YP_004412235.1 330837594 10495980 complement(1964625..1964939) 1 NC_015436.1 COGs: COG3254 conserved hypothetical protein; InterPro IPR013448:IPR008000; KEGG: bth:BT_4177 hypothetical protein; PFAM: Rhamnose mutarotase; SPTR: uncharacterized protein; TIGRFAM: L-rhamnose 1-epimerase; IMG reference gene:2503957969; PFAM: Domain of unknown function (DUF718); TIGRFAM: L-rhamnose 1-epimerase; L-rhamnose 1-epimerase 1964939 10495980 Spico_1655 Sphaerochaeta coccoides DSM 17374 L-rhamnose 1-epimerase YP_004412235.1 1964625 R 760011 CDS YP_004412236.1 330837595 10495981 complement(1964939..1966027) 1 NC_015436.1 COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: sta:STHERM_c08350 transporter; PFAM: ABC transporter permease; SPTR: Transporter; IMG reference gene:2503957970; PFAM: Branched-chain amino acid transport system / permease component; inner-membrane translocator 1966027 10495981 Spico_1656 Sphaerochaeta coccoides DSM 17374 inner-membrane translocator YP_004412236.1 1964939 R 760011 CDS YP_004412237.1 330837596 10495982 complement(1966024..1967043) 1 NC_015436.1 COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: oan:Oant_3568 monosaccharide-transporting ATPase; PFAM: ABC transporter permease; SPTR: Monosaccharide-transporting ATPase; IMG reference gene:2503957971; PFAM: Branched-chain amino acid transport system / permease component; inner-membrane translocator 1967043 10495982 Spico_1657 Sphaerochaeta coccoides DSM 17374 inner-membrane translocator YP_004412237.1 1966024 R 760011 CDS YP_004412238.1 330837597 10495983 complement(1967040..1968548) 1 NC_015436.1 COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: sta:STHERM_c08330 ribose/galactose/methyl galactoside import ATP-bindingprotein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ribose/galactose/methyl galactoside import ATP-bindingprotein; IMG reference gene:2503957972; PFAM: ABC transporter; monosaccharide-transporting ATPase 1968548 10495983 Spico_1658 Sphaerochaeta coccoides DSM 17374 monosaccharide-transporting ATPase YP_004412238.1 1967040 R 760011 CDS YP_004412239.1 330837598 10495984 complement(1968681..1969685) 1 NC_015436.1 COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR013459; KEGG: sta:STHERM_c08320 transporter; SPTR: Transporter; TIGRFAM: Rhamnose ABC transporter, rhamnose-binding; IMG reference gene:2503957973; PFAM: family; TIGRFAM: rhamnose ABC transporter, rhamnose-binding protein; rhamnose-binding protein 1969685 10495984 Spico_1659 Sphaerochaeta coccoides DSM 17374 rhamnose-binding protein YP_004412239.1 1968681 R 760011 CDS YP_004412240.1 330837599 10495985 complement(1969786..1970895) 1 NC_015436.1 COGs: COG3347 conserved hypothetical protein; InterPro IPR001303; KEGG: sta:STHERM_c08370 short chain dehydrogenase; PFAM: Class II aldolase/adducin, N-terminal; SPTR: Uncharacterized conserved protein; IMG reference gene:2503957974; PFAM: Class II Aldolase and Adducin N-terminal domain; class II aldolase/adducin family protein 1970895 10495985 Spico_1660 Sphaerochaeta coccoides DSM 17374 class II aldolase/adducin family protein YP_004412240.1 1969786 R 760011 CDS YP_004412241.1 330837600 10495986 complement(1970895..1972151) 1 NC_015436.1 COGs: COG4806 L-rhamnose isomerase; InterPro IPR009308; KEGG: csc:Csac_0876 L-rhamnose isomerase; PFAM: Rhamnose isomerase; PRIAM: L-rhamnose isomerase; SPTR: L-rhamnose isomerase; IMG reference gene:2503957975; PFAM: L-rhamnose isomerase (RhaA); TIGRFAM: L-rhamnose isomerase; L-rhamnose isomerase 1972151 10495986 Spico_1661 Sphaerochaeta coccoides DSM 17374 L-rhamnose isomerase YP_004412241.1 1970895 R 760011 CDS YP_004412242.1 330837601 10495987 1972296..1973165 1 NC_015436.1 COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR003313:IPR000005:IPR018060; KEGG: rba:RB680 L-rhamnose operon transcriptional activator; PFAM: HTH transcriptional regulator, AraC; HTH transcriptional regulator, AraC, arabinose-binding/dimerisation; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator, AraC family; IMG reference gene:2503957976; PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator 1973165 10495987 Spico_1662 Sphaerochaeta coccoides DSM 17374 AraC family transcriptional regulator YP_004412242.1 1972296 D 760011 CDS YP_004412243.1 330837602 10495988 complement(1973134..1974258) 1 NC_015436.1 COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: smd:Smed_4315 periplasmic binding protein/LacI transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI; SPTR: Periplasmic binding protein/LacI transcriptional regulator; IMG reference gene:2503957977; PFAM: Bacterial regulatory proteins, lacI family; family; LacI family transcriptional regulator 1974258 10495988 Spico_1663 Sphaerochaeta coccoides DSM 17374 LacI family transcriptional regulator YP_004412243.1 1973134 R 760011 CDS YP_004412244.1 330837603 10495989 complement(1974300..1974719) 1 NC_015436.1 COGs: COG4154 Fucose dissimilation pathway protein FucU; InterPro IPR007721; KEGG: pjd:Pjdr2_1349 RbsD or FucU transport; PFAM: D-ribose pyranase RbsD/L-fucose mutarotase FucU; SPTR: Fucose operon protein FucU; IMG reference gene:2503957978; PFAM: RbsD / FucU transport protein family; transport protein RbsD/FucU 1974719 10495989 Spico_1664 Sphaerochaeta coccoides DSM 17374 transport protein RbsD/FucU YP_004412244.1 1974300 R 760011 CDS YP_004412245.1 330837604 10495990 1974873..1976684 1 NC_015436.1 COGs: COG2407 L-fucose isomerase and related protein; HAMAP: L-fucose isomerase; InterPro IPR005763:IPR012888:IPR012889:IPR015888; KEGG: gym:GYMC10_3924 L-fucose isomerase; PFAM: L-fucose isomerase-like, C-terminal; L-fucose isomerase, N-terminal-1; L-fucose isomerase, N-terminal-2; PRIAM: L-fucose isomerase; SPTR: L-fucose isomerase; TIGRFAM: L-fucose isomerase; IMG reference gene:2503957979; PFAM: L-fucose isomerase, C-terminal domain; L-fucose isomerase, first N-terminal domain; L-fucose isomerase, second N-terminal domain; TIGRFAM: L-fucose isomerase; L-fucose isomerase 1976684 10495990 Spico_1665 Sphaerochaeta coccoides DSM 17374 L-fucose isomerase YP_004412245.1 1974873 D 760011 CDS YP_004412246.1 330837605 10495991 1976918..1978105 1 NC_015436.1 COGs: COG0738 Fucose permease; InterPro IPR011701; KEGG: gym:GYMC10_2567 major facilitator superfamily MFS_1; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; IMG reference gene:2503957980; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein 1978105 10495991 Spico_1666 Sphaerochaeta coccoides DSM 17374 major facilitator superfamily protein YP_004412246.1 1976918 D 760011 CDS YP_004412247.1 330837606 10495992 complement(1978157..1978555) 1 NC_015436.1 KEGG: sta:STHERM_c21820 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957981; PFAM: Protein of unknown function (DUF1312); hypothetical protein 1978555 10495992 Spico_1667 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412247.1 1978157 R 760011 CDS YP_004412248.1 330837607 10495993 complement(1978592..1979590) 1 NC_015436.1 COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127; KEGG: ccu:Ccur_04310 ABC-type metal ion transport system, periplasmic component/surface adhesin; PFAM: ABC transporter metal-binding lipoprotein; SPTR: Zinc ABC transporter, zinc-binding protein AdcA; IMG reference gene:2503957982; PFAM: Periplasmic solute binding protein family; periplasmic solute binding protein 1979590 10495993 Spico_1668 Sphaerochaeta coccoides DSM 17374 periplasmic solute binding protein YP_004412248.1 1978592 R 760011 CDS YP_004412249.1 330837608 10495994 complement(1980112..1980588) 1 NC_015436.1 KEGG: ssm:Spirs_0502 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957983; hypothetical protein 1980588 10495994 Spico_1669 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412249.1 1980112 R 760011 CDS YP_004412250.1 330837609 10495995 complement(1980585..1981697) 1 NC_015436.1 COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: aco:Amico_0360 inner-membrane translocator; PFAM: ABC transporter permease; SPTR: Inner-membrane translocator; IMG reference gene:2503957984; PFAM: Branched-chain amino acid transport system / permease component; monosaccharide ABC transporter membrane protein, CUT2 family 1981697 10495995 Spico_1670 Sphaerochaeta coccoides DSM 17374 monosaccharide ABC transporter membrane protein, CUT2 family YP_004412250.1 1980585 R 760011 CDS YP_004412251.1 330837610 10495996 complement(1981694..1982821) 1 NC_015436.1 COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: ssm:Spirs_0504 inner-membrane translocator; PFAM: ABC transporter permease; SPTR: uncharacterized protein; IMG reference gene:2503957985; PFAM: Branched-chain amino acid transport system / permease component; monosaccharide ABC transporter membrane protein, CUT2 family 1982821 10495996 Spico_1671 Sphaerochaeta coccoides DSM 17374 monosaccharide ABC transporter membrane protein, CUT2 family YP_004412251.1 1981694 R 760011 CDS YP_004412252.1 330837611 10495997 complement(1982818..1984443) 1 NC_015436.1 COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: ssm:Spirs_0505 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: uncharacterized protein; IMG reference gene:2503957986; PFAM: ABC transporter; monosaccharide ABC transporter ATP-binding protein, CUT2 family 1984443 10495997 Spico_1672 Sphaerochaeta coccoides DSM 17374 monosaccharide ABC transporter ATP-binding protein, CUT2 family YP_004412252.1 1982818 R 760011 CDS YP_004412253.1 330837612 10495998 complement(1984636..1985856) 1 NC_015436.1 KEGG: ssm:Spirs_0506 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503957987; hypothetical protein 1985856 10495998 Spico_1673 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412253.1 1984636 R 760011 CDS YP_004412254.1 330837613 10495999 1986205..1986822 1 NC_015436.1 KEGG: cco:CCC13826_0601 outer membrane protein; SPTR: outer membrane protein; IMG reference gene:2503957988; hypothetical protein 1986822 10495999 Spico_1674 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412254.1 1986205 D 760011 CDS YP_004412255.1 330837614 10496000 1986855..1987001 1 NC_015436.1 IMG reference gene:2503957989; hypothetical protein 1987001 10496000 Spico_1675 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412255.1 1986855 D 760011 CDS YP_004412256.1 330837615 10496001 complement(1986940..1987716) 1 NC_015436.1 COGs: COG0566 rRNA methylase; InterPro IPR004441:IPR013123:IPR001537; KEGG: ssm:Spirs_3194 RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; SMART: RNA 2-O ribose methyltransferase, substrate binding; SPTR: rRNA methylase; TIGRFAM: RNA methyltransferase TrmH, group 3; IMG reference gene:2503957990; PFAM: SpoU rRNA Methylase; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, , group 3; TrmH family RNA methyltransferase 1987716 10496001 Spico_1676 Sphaerochaeta coccoides DSM 17374 TrmH family RNA methyltransferase YP_004412256.1 1986940 R 760011 CDS YP_004412257.1 330837616 10496002 complement(1987719..1988855) 1 NC_015436.1 COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; HAMAP: Chaperone DnaJ; InterPro IPR012724:IPR001623:IPR001305:IPR002939; KEGG: ssm:Spirs_3197 chaperone protein DnaJ; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; Heat shock protein DnaJ, cysteine-rich domain; SMART: Heat shock protein DnaJ, N-terminal; SPTR: Chaperone protein DnaJ; TIGRFAM: Chaperone DnaJ; IMG reference gene:2503957991; PFAM: DnaJ C terminal region; DnaJ domain; DnaJ central domain (4 repeats); TIGRFAM: chaperone protein DnaJ; molecular chaperone DnaJ 1988855 10496002 Spico_1677 Sphaerochaeta coccoides DSM 17374 molecular chaperone DnaJ YP_004412257.1 1987719 R 760011 CDS YP_004412258.1 330837617 10496003 complement(1988935..1990863) 1 NC_015436.1 COGs: COG0443 Molecular chaperone; HAMAP: Chaperone DnaK; InterPro IPR012725:IPR013126; KEGG: ssm:Spirs_3198 chaperone protein DnaK; PFAM: Heat shock protein 70; SPTR: Chaperone protein dnaK; TIGRFAM: Chaperone DnaK; IMG reference gene:2503957992; PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK; molecular chaperone DnaK 1990863 10496003 Spico_1678 Sphaerochaeta coccoides DSM 17374 molecular chaperone DnaK YP_004412258.1 1988935 R 760011 CDS YP_004412259.1 330837618 10496004 complement(1990919..1991545) 1 NC_015436.1 COGs: COG0576 Molecular chaperone GrpE (heat shock protein); HAMAP: GrpE nucleotide exchange factor; InterPro IPR000740; KEGG: ssm:Spirs_3199 GrpE protein; PFAM: GrpE nucleotide exchange factor; SPTR: Protein grpE; IMG reference gene:2503957993; PFAM: GrpE; protein grpE 1991545 10496004 Spico_1679 Sphaerochaeta coccoides DSM 17374 protein grpE YP_004412259.1 1990919 R 760011 CDS YP_004412260.1 330837619 10496005 1992012..1993469 1 NC_015436.1 COGs: COG0281 Malic enzyme; InterPro IPR012301:IPR012302; KEGG: tde:TDE2446 malate dehydrogenase; PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; PRIAM: Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)); SMART: Malic enzyme, NAD-binding; SPTR: Malate dehydrogenase; IMG reference gene:2503957994; PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain; malate dehydrogenase 1993469 10496005 Spico_1680 Sphaerochaeta coccoides DSM 17374 malate dehydrogenase YP_004412260.1 1992012 D 760011 CDS YP_004412261.1 330837620 10496006 complement(1993585..1997184) 1 NC_015436.1 InterPro IPR011493; KEGG: azl:AZL_e00660 filamentous haemagglutinin outer membrane protein; SPTR: Filamentous haemagglutinin outer membrane protein; IMG reference gene:2503957995; PFAM: The GLUG motif; hypothetical protein 1997184 10496006 Spico_1681 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412261.1 1993585 R 760011 CDS YP_004412262.1 330837621 10496007 complement(1997671..1998777) 1 NC_015436.1 KEGG: nvi:100119134 similar to conserved hypothetical protein; SPTR: GL17626; IMG reference gene:2503957996; hypothetical protein 1998777 10496007 Spico_1682 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412262.1 1997671 R 760011 CDS YP_004412263.1 330837622 10496008 complement(1998807..1999535) 1 NC_015436.1 COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005834; KEGG: ssm:Spirs_3201 haloacid dehalogenase domain protein hydrolase; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: hydrolase of the HAD superfamily; IMG reference gene:2503957997; PFAM: haloacid dehalogenase-like hydrolase; haloacid dehalogenase 1999535 10496008 Spico_1683 Sphaerochaeta coccoides DSM 17374 haloacid dehalogenase YP_004412263.1 1998807 R 760011 CDS YP_004412264.1 330837623 10496009 complement(1999539..2001182) 1 NC_015436.1 COGs: COG1160 GTPase; HAMAP: GTP-binding, EngA; InterPro IPR016484:IPR005225:IPR002917; KEGG: ssm:Spirs_3209 ribosome-associated GTPase EngA; PFAM: GTP-binding protein, HSR1-related; SPTR: GTP-binding protein EngA; TIGRFAM: GTP-binding, EngA; Small GTP-binding protein; IMG reference gene:2503957998; PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain; GTP-binding protein engA 2001182 10496009 Spico_1684 Sphaerochaeta coccoides DSM 17374 GTP-binding protein engA YP_004412264.1 1999539 R 760011 CDS YP_004412265.1 330837624 10496010 complement(2001163..2002929) 1 NC_015436.1 COGs: COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component); InterPro IPR006318:IPR008731:IPR008279:IPR000121; KEGG: ssm:Spirs_3210 phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilising enzyme; Phosphotransferase system, PEP-utilising enzyme, N-terminal; PEP-utilising enzyme, mobile domain; PRIAM: Phosphoenolpyruvate--protein phosphotransferase; SPTR: Phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: Phosphoenolpyruvate-protein phosphotransferase; IMG reference gene:2503957999; PFAM: PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; phosphoenolpyruvate-protein phosphotransferase 2002929 10496010 Spico_1685 Sphaerochaeta coccoides DSM 17374 phosphoenolpyruvate-protein phosphotransferase YP_004412265.1 2001163 R 760011 CDS YP_004412266.1 330837625 10496011 2003136..2003771 1 NC_015436.1 InterPro IPR019606; KEGG: sti:Sthe_0621 spore germination protein-like protein; PFAM: GerMN domain; SMART: GerMN domain; SPTR: uncharacterized protein; IMG reference gene:2503958000; PFAM: Sporulation and spore germination; lipoprotein LpqB 2003771 10496011 Spico_1686 Sphaerochaeta coccoides DSM 17374 lipoprotein LpqB YP_004412266.1 2003136 D 760011 CDS YP_004412267.1 330837626 10496012 complement(2003846..2004628) 1 NC_015436.1 COGs: COG1189 rRNA methylase; InterPro IPR004538:IPR002877; KEGG: sta:STHERM_c13010 hemolysin; PFAM: Ribosomal RNA methyltransferase RrmJ/FtsJ; SPTR: Hemolysin; TIGRFAM: Haemolysin A; IMG reference gene:2503958001; PFAM: FtsJ-like methyltransferase; TIGRFAM: hemolysin TlyA family protein; hemolysin A 2004628 10496012 Spico_1687 Sphaerochaeta coccoides DSM 17374 hemolysin A YP_004412267.1 2003846 R 760011 CDS YP_004412268.1 330837627 10496013 complement(2004632..2005432) 1 NC_015436.1 COGs: COG1692 conserved hypothetical protein; InterPro IPR005235:IPR004843; KEGG: ssm:Spirs_3213 Ser/Thr protein phosphatase; PFAM: Metallo-dependent phosphatase; SPTR: uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP00282; IMG reference gene:2503958002; TIGRFAM: metallophosphoesterase, MG_246/BB_0505 family; hypothetical protein 2005432 10496013 Spico_1688 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412268.1 2004632 R 760011 CDS YP_004412269.1 330837628 10496014 complement(2005457..2006989) 1 NC_015436.1 COGs: COG1418 HD superfamily hydrolase; HAMAP: 2',3'-cyclic-nucleotide 2'-phosphodiesterase; InterProIPR017705:IPR006675:IPR018111:IPR006674:IPR 004087:IPR003607; KEGG: ssm:Spirs_3214 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; K Homology, type 1, subgroup; SMART: Metal-dependent phosphohydrolase, HD domain; K Homology; SPTR: 2',3'-cyclic-nucleotide 2'-phosphodiesterase; TIGRFAM: 2',3'-cyclic-nucleotide 2'-phosphodiesterase; Uncharacterised protein family HDIG; IMG reference gene:2503958003; PFAM: KH domain; HD domain; Domain of unknown function (DUF3552); TIGRFAM: conserved hypothetical protein YmdA/YtgF; uncharacterized domain HDIG; 2,3 cyclic-nucleotide 2-phosphodiesterase 2006989 10496014 Spico_1689 Sphaerochaeta coccoides DSM 17374 2,3 cyclic-nucleotide 2-phosphodiesterase YP_004412269.1 2005457 R 760011 CDS YP_004412270.1 330837629 10496015 complement(2007350..2007865) 1 NC_015436.1 COGs: COG0203 Ribosomal protein L17; HAMAP: Ribosomal protein L17; InterPro IPR000456; KEGG: ssm:Spirs_0981 ribosomal protein L17; PFAM: Ribosomal protein L17; SPTR: 50S ribosomal protein L17; TIGRFAM: Ribosomal protein L17; IMG reference gene:2503958004; PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17; 50S ribosomal protein L17 2007865 10496015 Spico_1690 Sphaerochaeta coccoides DSM 17374 50S ribosomal protein L17 YP_004412270.1 2007350 R 760011 CDS YP_004412271.1 330837630 10496016 complement(2007855..2008907) 1 NC_015436.1 COGs: COG0202 DNA-directed RNA polymerase alpha subunit/40 kD subunit; HAMAP: DNA-directed RNA polymerase, alpha subunit; InterProIPR011773:IPR011261:IPR011262:IPR011260:IPR 011263; KEGG: ssm:Spirs_0980 DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase, alpha subunit, C-terminal; DNA-directed RNA polymerase, insert domain; DNA-directed RNA polymerase, dimerisation; SMART: DNA-directed RNA polymerase, RpoA/D/Rpb3-type; SPTR: uncharacterized protein; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; IMG reference gene:2503958005; PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type; DNA-directed RNA polymerase subunit alpha 2008907 10496016 Spico_1691 Sphaerochaeta coccoides DSM 17374 DNA-directed RNA polymerase subunit alpha YP_004412271.1 2007855 R 760011 CDS YP_004412272.1 330837631 10496017 complement(2008917..2009564) 1 NC_015436.1 COGs: COG0522 Ribosomal protein S4 and related protein; InterPro IPR005709:IPR001912:IPR002942:IPR000253; KEGG: ssm:Spirs_0979 ribosomal protein S4; PFAM: RNA-binding S4; Ribosomal protein S4/S9, N-terminal; Forkhead-associated (FHA) domain; SMART: RNA-binding S4; SPTR: 30S ribosomal protein S4; TIGRFAM: Ribosomal protein S4, bacterial-type; IMG reference gene:2503958006; PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type; 30S ribosomal protein S4 2009564 10496017 Spico_1692 Sphaerochaeta coccoides DSM 17374 30S ribosomal protein S4 YP_004412272.1 2008917 R 760011 CDS YP_004412273.1 330837632 10496018 complement(2009588..2009965) 1 NC_015436.1 COGs: COG0100 Ribosomal protein S11; InterPro IPR019981:IPR001971; KEGG: ssm:Spirs_0978 30S ribosomal protein S11; PFAM: Ribosomal protein S11; SPTR: 30S ribosomal protein S11; TIGRFAM: Ribosomal protein S11, bacterial-type; IMG reference gene:2503958007; PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; 30S ribosomal protein S11 2009965 10496018 Spico_1693 Sphaerochaeta coccoides DSM 17374 30S ribosomal protein S11 YP_004412273.1 2009588 R 760011 CDS YP_004412274.1 330837633 10496019 complement(2009980..2010345) 1 NC_015436.1 COGs: COG0099 Ribosomal protein S13; InterPro IPR019980:IPR001892; KEGG: ssm:Spirs_0977 30S ribosomal protein S13; PFAM: Ribosomal protein S13; SPTR: 30S ribosomal protein S13; TIGRFAM: Ribosomal protein S13, bacterial-type; IMG reference gene:2503958008; PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13; 30S ribosomal protein S13 2010345 10496019 Spico_1694 Sphaerochaeta coccoides DSM 17374 30S ribosomal protein S13 YP_004412274.1 2009980 R 760011 CDS YP_004412275.1 330837634 10496020 complement(2010372..2010485) 1 NC_015436.1 HAMAP: Ribosomal protein L36; InterPro IPR000473; KEGG: ssm:Spirs_0976 ribosomal protein L36; PFAM: Ribosomal protein L36; SPTR: 50S ribosomal protein L36; TIGRFAM: Ribosomal protein L36; IMG reference gene:2503958009; PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type; 50S ribosomal protein L36 2010485 10496020 Spico_1695 Sphaerochaeta coccoides DSM 17374 50S ribosomal protein L36 YP_004412275.1 2010372 R 760011 CDS YP_004412276.1 330837635 10496021 complement(2010501..2011820) 1 NC_015436.1 COGs: COG0201 Preprotein translocase subunit SecY; InterPro IPR002208; KEGG: ssm:Spirs_0975 preprotein translocase, SecY subunit; PFAM: SecY protein; SPTR: uncharacterized protein; TIGRFAM: SecY protein; IMG reference gene:2503958010; PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit; protein translocase subunit secY/sec61 alpha 2011820 10496021 Spico_1696 Sphaerochaeta coccoides DSM 17374 protein translocase subunit secY/sec61 alpha YP_004412276.1 2010501 R 760011 CDS YP_004412277.1 330837636 10496022 complement(2011840..2012274) 1 NC_015436.1 COGs: COG0200 Ribosomal protein L15; InterPro IPR005749; KEGG: ddf:DEFDS_1754 50S ribosomal protein L15; SPTR: 50S ribosomal protein L15; TIGRFAM: Ribosomal protein L15, bacterial-type; IMG reference gene:2503958011; PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle; 50S ribosomal protein L15 2012274 10496022 Spico_1697 Sphaerochaeta coccoides DSM 17374 50S ribosomal protein L15 YP_004412277.1 2011840 R 760011 CDS YP_004412278.1 330837637 10496023 complement(2012276..2012473) 1 NC_015436.1 InterPro IPR005996:IPR016082; KEGG: llm:llmg_2363 50S ribosomal protein L30; PFAM: Ribosomal protein L30, ferredoxin-like fold domain; SPTR: 50S ribosomal protein L30; TIGRFAM: Ribosomal protein L30, bacterial-type; IMG reference gene:2503958012; PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle; 50S ribosomal protein L30 2012473 10496023 Spico_1698 Sphaerochaeta coccoides DSM 17374 50S ribosomal protein L30 YP_004412278.1 2012276 R 760011 CDS YP_004412279.1 330837638 10496024 complement(2012476..2012982) 1 NC_015436.1 COGs: COG0098 Ribosomal protein S5; InterPro IPR005712:IPR013810:IPR005324; KEGG: ssm:Spirs_0972 ribosomal protein S5; PFAM: Ribosomal protein S5, N-terminal; Ribosomal protein S5, C-terminal; SPTR: 30S ribosomal protein S5; TIGRFAM: Ribosomal protein S5, bacterial-type; IMG reference gene:2503958013; PFAM: Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type; 30S ribosomal protein S5 2012982 10496024 Spico_1699 Sphaerochaeta coccoides DSM 17374 30S ribosomal protein S5 YP_004412279.1 2012476 R 760011 CDS YP_004412280.1 330837639 10496025 complement(2012992..2013351) 1 NC_015436.1 COGs: COG0256 Ribosomal protein L18; InterPro IPR004389:IPR005484; KEGG: tde:TDE0783 50S ribosomal protein L18; PFAM: Ribosomal protein L18/L5; SPTR: 50S ribosomal protein L18; TIGRFAM: Ribosomal protein L18, bacterial; IMG reference gene:2503958014; PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type; 50S ribosomal protein L18 2013351 10496025 Spico_1700 Sphaerochaeta coccoides DSM 17374 50S ribosomal protein L18 YP_004412280.1 2012992 R 760011 CDS YP_004412281.1 330837640 10496026 complement(2013369..2013911) 1 NC_015436.1 COGs: COG0097 Ribosomal protein L6P/L9E; InterPro IPR019906:IPR020040; KEGG: ssm:Spirs_0970 ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain; SPTR: 50S ribosomal protein L6; TIGRFAM: Ribosomal protein L6, bacterial-type; IMG reference gene:2503958015; PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type; 50S ribosomal protein L6 2013911 10496026 Spico_1701 Sphaerochaeta coccoides DSM 17374 50S ribosomal protein L6 YP_004412281.1 2013369 R 760011 CDS YP_004412282.1 330837641 10496027 complement(2013922..2014320) 1 NC_015436.1 COGs: COG0096 Ribosomal protein S8; InterPro IPR000630; KEGG: ssm:Spirs_0969 ribosomal protein S8; PFAM: Ribosomal protein S8; SPTR: 30S ribosomal protein S8; IMG reference gene:2503958016; PFAM: Ribosomal protein S8; 30S ribosomal protein S8 2014320 10496027 Spico_1702 Sphaerochaeta coccoides DSM 17374 30S ribosomal protein S8 YP_004412282.1 2013922 R 760011 CDS YP_004412283.1 330837642 10496028 complement(2014330..2014515) 1 NC_015436.1 COGs: COG0199 Ribosomal protein S14; InterPro IPR001209; KEGG: ssm:Spirs_0968 ribosomal protein S14; PFAM: Ribosomal protein S14; SPTR: 30S ribosomal protein S14 type Z; IMG reference gene:2503958017; PFAM: Ribosomal protein S14p/S29e; 30S ribosomal protein S14 2014515 10496028 Spico_1703 Sphaerochaeta coccoides DSM 17374 30S ribosomal protein S14 YP_004412283.1 2014330 R 760011 CDS YP_004412284.1 330837643 10496029 complement(2014531..2015085) 1 NC_015436.1 COGs: COG0094 Ribosomal protein L5; InterPro IPR002132; KEGG: ssm:Spirs_0967 ribosomal protein L5; PFAM: Ribosomal protein L5; SPTR: 50S ribosomal protein L5; IMG reference gene:2503958018; PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5; 50S ribosomal protein L5 2015085 10496029 Spico_1704 Sphaerochaeta coccoides DSM 17374 50S ribosomal protein L5 YP_004412284.1 2014531 R 760011 CDS YP_004412285.1 330837644 10496030 complement(2015085..2015390) 1 NC_015436.1 COGs: COG0198 Ribosomal protein L24; InterPro IPR003256:IPR005824; KEGG: ssm:Spirs_0966 ribosomal protein L24; PFAM: KOW; SMART: KOW; SPTR: 50S ribosomal protein L24; TIGRFAM: Ribosomal protein L24; IMG reference gene:2503958019; PFAM: KOW motif; TIGRFAM: ribosomal protein L24, bacterial/organelle; 50S ribosomal protein L24 2015390 10496030 Spico_1705 Sphaerochaeta coccoides DSM 17374 50S ribosomal protein L24 YP_004412285.1 2015085 R 760011 CDS YP_004412286.1 330837645 10496031 complement(2015400..2015765) 1 NC_015436.1 COGs: COG0093 Ribosomal protein L14; InterPro IPR005745:IPR000218; KEGG: ssm:Spirs_0965 ribosomal protein L14; PFAM: Ribosomal protein L14b/L23e; SPTR: 50S ribosomal protein L14; TIGRFAM: Ribosomal protein L14, bacterial-type; IMG reference gene:2503958020; PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle; 50S ribosomal protein L14 2015765 10496031 Spico_1706 Sphaerochaeta coccoides DSM 17374 50S ribosomal protein L14 YP_004412286.1 2015400 R 760011 CDS YP_004412287.1 330837646 10496032 complement(2015781..2016032) 1 NC_015436.1 COGs: COG0186 Ribosomal protein S17; InterPro IPR019984:IPR000266; KEGG: ssm:Spirs_0964 30S ribosomal protein S17; PFAM: Ribosomal protein S17; SPTR: 30S ribosomal protein S17; TIGRFAM: Ribosomal protein S17, bacterial-type; IMG reference gene:2503958021; PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; 30S ribosomal protein S17 2016032 10496032 Spico_1707 Sphaerochaeta coccoides DSM 17374 30S ribosomal protein S17 YP_004412287.1 2015781 R 760011 CDS YP_004412288.1 330837647 10496033 complement(2016047..2016253) 1 NC_015436.1 InterPro IPR001854; KEGG: ssm:Spirs_0963 ribosomal protein L29; PFAM: Ribosomal protein L29; SPTR: 50S ribosomal protein L29; TIGRFAM: Ribosomal protein L29; IMG reference gene:2503958022; PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29; 50S ribosomal protein L29 2016253 10496033 Spico_1708 Sphaerochaeta coccoides DSM 17374 50S ribosomal protein L29 YP_004412288.1 2016047 R 760011 CDS YP_004412289.1 330837648 10496034 complement(2016259..2016675) 1 NC_015436.1 COGs: COG0197 Ribosomal protein L16/L10E; HAMAP: Ribosomal protein L16; InterPro IPR000114:IPR016180; KEGG: ssm:Spirs_0962 ribosomal protein L16; PFAM: Ribosomal protein L10e/L16; SPTR: 50S ribosomal protein L16; TIGRFAM: Ribosomal protein L16; IMG reference gene:2503958023; PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle; 50S ribosomal protein L16 2016675 10496034 Spico_1709 Sphaerochaeta coccoides DSM 17374 50S ribosomal protein L16 YP_004412289.1 2016259 R 760011 CDS YP_004412290.1 330837649 10496035 complement(2016678..2017388) 1 NC_015436.1 COGs: COG0092 Ribosomal protein S3; InterProIPR005704:IPR008282:IPR004044:IPR001351:IPR 004087; KEGG: ssm:Spirs_0961 ribosomal protein S3; PFAM: Ribosomal protein S3, C-terminal; Ribosomal protein S3, N-terminal; K Homology, type 2; SMART: K Homology; SPTR: 30S ribosomal protein S3; TIGRFAM: Ribosomal protein S3, bacterial; IMG reference gene:2503958024; PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type; 30S ribosomal protein S3 2017388 10496035 Spico_1710 Sphaerochaeta coccoides DSM 17374 30S ribosomal protein S3 YP_004412290.1 2016678 R 760011 CDS YP_004412291.1 330837650 10496036 complement(2017388..2017762) 1 NC_015436.1 COGs: COG0091 Ribosomal protein L22; InterPro IPR005727:IPR001063; KEGG: sta:STHERM_c05010 50S ribosomal protein L22; PFAM: Ribosomal protein L22/L17; SPTR: 50S ribosomal protein L22; TIGRFAM: Ribosomal protein L22, bacterial-type; IMG reference gene:2503958025; PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type; 50S ribosomal protein L22 2017762 10496036 Spico_1711 Sphaerochaeta coccoides DSM 17374 50S ribosomal protein L22 YP_004412291.1 2017388 R 760011 CDS YP_004412292.1 330837651 10496037 complement(2017762..2018040) 1 NC_015436.1 COGs: COG0185 Ribosomal protein S19; InterPro IPR005732:IPR002222; KEGG: ssm:Spirs_0959 ribosomal protein S19; PFAM: Ribosomal protein S19/S15; SPTR: 30S ribosomal protein S19; TIGRFAM: Ribosomal protein S19, bacterial-type; IMG reference gene:2503958026; PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle; 30S ribosomal protein S19 2018040 10496037 Spico_1712 Sphaerochaeta coccoides DSM 17374 30S ribosomal protein S19 YP_004412292.1 2017762 R 760011 CDS YP_004412293.1 330837652 10496038 complement(2018050..2018874) 1 NC_015436.1 COGs: COG0090 Ribosomal protein L2; InterPro IPR005880:IPR022666:IPR022669; KEGG: tde:TDE0770 50S ribosomal protein L2; PFAM: Ribosomal protein L2, C-terminal; Ribosomal Proteins L2, RNA binding domain; SPTR: 50S ribosomal protein L2; TIGRFAM: Ribosomal protein L2, bacterial-type; IMG reference gene:2503958027; PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar; 50S ribosomal protein L2 2018874 10496038 Spico_1713 Sphaerochaeta coccoides DSM 17374 50S ribosomal protein L2 YP_004412293.1 2018050 R 760011 CDS YP_004412294.1 330837653 10496039 complement(2018889..2019224) 1 NC_015436.1 COGs: COG0089 Ribosomal protein L23; InterPro IPR013025; KEGG: ssm:Spirs_0957 ribosomal protein L25/L23; PFAM: Ribosomal protein L25/L23; SPTR: 50S ribosomal protein L23; IMG reference gene:2503958028; PFAM: Ribosomal protein L23; 50S ribosomal protein L25 2019224 10496039 Spico_1714 Sphaerochaeta coccoides DSM 17374 50S ribosomal protein L25 YP_004412294.1 2018889 R 760011 CDS YP_004412295.1 330837654 10496040 complement(2019202..2019831) 1 NC_015436.1 COGs: COG0088 Ribosomal protein L4; InterPro IPR002136; KEGG: ssm:Spirs_0956 ribosomal protein L4/L1e; PFAM: Ribosomal protein L4/L1e; SPTR: 50S ribosomal protein L4; IMG reference gene:2503958029; PFAM: Ribosomal protein L4/L1 family; TIGRFAM: 50S ribosomal protein L4, bacterial/organelle; 50S ribosomal protein L4 2019831 10496040 Spico_1715 Sphaerochaeta coccoides DSM 17374 50S ribosomal protein L4 YP_004412295.1 2019202 R 760011 CDS YP_004412296.1 330837655 10496041 complement(2019841..2020461) 1 NC_015436.1 COGs: COG0087 Ribosomal protein L3; InterPro IPR019927:IPR000597; KEGG: ssm:Spirs_0955 50S ribosomal protein L3; PFAM: Ribosomal protein L3; SPTR: 50S ribosomal protein L3; TIGRFAM: Ribosomal protein L3, bacterial/organelle-type; IMG reference gene:2503958030; PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial; 50S ribosomal protein L3P 2020461 10496041 Spico_1716 Sphaerochaeta coccoides DSM 17374 50S ribosomal protein L3P YP_004412296.1 2019841 R 760011 CDS YP_004412297.1 330837656 10496042 complement(2020478..2020786) 1 NC_015436.1 COGs: COG0051 Ribosomal protein S10; HAMAP: Ribosomal protein S10 subgroup; InterPro IPR005731:IPR001848; KEGG: ssm:Spirs_0954 ribosomal protein S10; PFAM: Ribosomal protein S10; SPTR: 30S ribosomal protein S10; TIGRFAM: Ribosomal protein S10 subgroup; IMG reference gene:2503958031; PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle; 30S ribosomal protein S10 2020786 10496042 Spico_1717 Sphaerochaeta coccoides DSM 17374 30S ribosomal protein S10 YP_004412297.1 2020478 R 760011 CDS YP_004412298.1 330837657 10496043 complement(2020850..2022037) 1 NC_015436.1 COGs: COG0050 GTPase - translation elongation factors; InterProIPR004541:IPR005225:IPR000795:IPR004161:IPR 004160; KEGG: ssm:Spirs_0953 translation elongation factor Tu; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal; SPTR: Elongation factor Tu-B; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; IMG reference gene:2503958032; PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU; translation elongation factor 1A (EF-1A/EF-Tu) 2022037 10496043 Spico_1718 Sphaerochaeta coccoides DSM 17374 translation elongation factor 1A (EF-1A/EF-Tu) YP_004412298.1 2020850 R 760011 CDS YP_004412299.1 330837658 10496044 complement(2022842..2023312) 1 NC_015436.1 COGs: COG0049 Ribosomal protein S7; InterPro IPR005717:IPR000235; KEGG: ssm:Spirs_0952 ribosomal protein S7; PFAM: Ribosomal protein S7; SPTR: 30S ribosomal protein S7; TIGRFAM: Ribosomal protein S7, bacterial-type; IMG reference gene:2503958033; PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle; 30S ribosomal protein S7 2023312 10496044 Spico_1719 Sphaerochaeta coccoides DSM 17374 30S ribosomal protein S7 YP_004412299.1 2022842 R 760011 CDS YP_004412300.1 330837659 10496045 complement(2023328..2023702) 1 NC_015436.1 COGs: COG0048 Ribosomal protein S12; InterPro IPR005679:IPR006032; KEGG: sta:STHERM_c04920 30S ribosomal protein S12; PFAM: Ribosomal protein S12/S23; SPTR: 30S ribosomal protein S12; TIGRFAM: Ribosomal protein S12, bacteria; IMG reference gene:2503958034; PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle; 30S ribosomal protein S12 2023702 10496045 Spico_1720 Sphaerochaeta coccoides DSM 17374 30S ribosomal protein S12 YP_004412300.1 2023328 R 760011 CDS YP_004412301.1 330837660 10496046 complement(2023884..2028173) 1 NC_015436.1 COGs: COG0086 DNA-directed RNA polymerase beta' subunit/160 kD subunit; HAMAP: DNA-directed RNA polymerase, subunit beta-prime; InterProIPR012754:IPR007080:IPR000722:IPR007066:IPR 007083:IPR007081:IPR006592; KEGG: ssm:Spirs_0950 DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1, domain 1; RNA polymerase, alpha subunit; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 5; SMART: RNA polymerase, N-terminal; SPTR: DNA-directed RNA polymerase, beta' subunit; TIGRFAM: DNA-directed RNA polymerase, subunit beta-prime; IMG reference gene:2503958035; PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 5; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form; DNA-directed RNA polymerase subunit beta' 2028173 10496046 Spico_1721 Sphaerochaeta coccoides DSM 17374 DNA-directed RNA polymerase subunit beta' YP_004412301.1 2023884 R 760011 CDS YP_004412302.1 330837661 10496047 complement(2028187..2031705) 1 NC_015436.1 COGs: COG0085 DNA-directed RNA polymerase beta subunit/140 kD subunit; HAMAP: DNA-directed RNA polymerase, beta subunit, bacterial-type; InterProIPR010243:IPR007644:IPR007642:IPR007645:IPR 019462:IPR007120:IPR007641; KEGG: ssm:Spirs_0949 DNA-directed RNA polymerase, beta subunit; PFAM: DNA-directed RNA polymerase, subunit 2, domain 6; RNA polymerase Rpb2, domain 3; RNA polymerase, beta subunit, protrusion; RNA polymerase Rpb2, domain 2; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2, domain 7; SPTR: DNA-directed RNA polymerase, beta subunit; TIGRFAM: DNA-directed RNA polymerase, beta subunit, bacterial-type; IMG reference gene:2503958036; PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit; DNA-directed RNA polymerase subunit beta 2031705 10496047 Spico_1722 Sphaerochaeta coccoides DSM 17374 DNA-directed RNA polymerase subunit beta YP_004412302.1 2028187 R 760011 CDS YP_004412303.1 330837662 10496048 complement(2031924..2032304) 1 NC_015436.1 COGs: COG0222 Ribosomal protein L7/L12; HAMAP: Ribosomal protein L7/L12; InterPro IPR000206:IPR013823; KEGG: aeh:Mlg_0450 50S ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12, C-terminal; SPTR: 50S ribosomal protein L7/L12; TIGRFAM: Ribosomal protein L7/L12; IMG reference gene:2503958037; PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12; 50S ribosomal protein L12 2032304 10496048 Spico_1723 Sphaerochaeta coccoides DSM 17374 50S ribosomal protein L12 YP_004412303.1 2031924 R 760011 CDS YP_004412304.1 330837663 10496049 complement(2032368..2032925) 1 NC_015436.1 COGs: COG0244 Ribosomal protein L10; HAMAP: Ribosomal protein L10; InterPro IPR022973:IPR001790; KEGG: ssm:Spirs_0947 ribosomal protein L10; PFAM: Ribosomal protein L10/acidic P0; SPTR: 50S ribosomal protein L10; IMG reference gene:2503958038; PFAM: Ribosomal protein L10; 50S ribosomal protein L10 2032925 10496049 Spico_1724 Sphaerochaeta coccoides DSM 17374 50S ribosomal protein L10 YP_004412304.1 2032368 R 760011 CDS YP_004412305.1 330837664 10496050 complement(2032939..2033634) 1 NC_015436.1 COGs: COG0081 Ribosomal protein L1; InterPro IPR005878:IPR002143; KEGG: ssm:Spirs_0946 ribosomal protein L1; PFAM: Ribosomal protein L1; SPTR: 50S ribosomal protein L1; TIGRFAM: Ribosomal protein L1, bacterial-type; IMG reference gene:2503958039; PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast; 50S ribosomal protein L1 2033634 10496050 Spico_1725 Sphaerochaeta coccoides DSM 17374 50S ribosomal protein L1 YP_004412305.1 2032939 R 760011 CDS YP_004412306.1 330837665 10496051 complement(2033636..2034067) 1 NC_015436.1 COGs: COG0080 Ribosomal protein L11; InterPro IPR006519:IPR020784:IPR020783:IPR000911; KEGG: sta:STHERM_c04860 50S ribosomal protein L11; PFAM: Ribosomal protein L11, C-terminal domain; Ribosomal protein L11, N-terminal domain; SMART: Ribosomal protein L11; SPTR: 50S ribosomal protein L11; TIGRFAM: Ribosomal protein L11, bacterial-type; IMG reference gene:2503958040; PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11; 50S ribosomal protein L17 2034067 10496051 Spico_1726 Sphaerochaeta coccoides DSM 17374 50S ribosomal protein L17 YP_004412306.1 2033636 R 760011 CDS YP_004412307.1 330837666 10496052 complement(2034271..2034840) 1 NC_015436.1 COGs: COG0250 Transcription antiterminator; InterPro IPR001062:IPR006645:IPR005824; KEGG: ssm:Spirs_0944 NusG antitermination factor; PFAM: Transcription antitermination protein, NusG, N-terminal; KOW; SMART: Transcription antitermination protein, NusG, N-terminal; KOW; SPTR: uncharacterized protein; TIGRFAM: Transcription antitermination protein, NusG; IMG reference gene:2503958041; PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG; transcription antitermination protein nusG 2034840 10496052 Spico_1727 Sphaerochaeta coccoides DSM 17374 transcription antitermination protein nusG YP_004412307.1 2034271 R 760011 CDS YP_004412308.1 330837667 10496053 complement(2034849..2035028) 1 NC_015436.1 InterPro IPR005807:IPR001901; KEGG: ssm:Spirs_0943 preprotein translocase, SecE subunit; PFAM: Protein SecE/Sec61-gamma protein; SPTR: Preprotein translocase subunit SecE; TIGRFAM: SecE subunit of protein translocation complex; IMG reference gene:2503958042; PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial; Preprotein translocase subunit SecE 2035028 10496053 Spico_1728 Sphaerochaeta coccoides DSM 17374 Preprotein translocase subunit SecE YP_004412308.1 2034849 R 760011 CDS YP_004412309.1 330837668 10496055 complement(2035161..2035337) 1 NC_015436.1 HAMAP: Ribosomal protein L33; InterPro IPR001705; KEGG: ssm:Spirs_0942 ribosomal protein L33; PFAM: Ribosomal protein L33; SPTR: 50S ribosomal protein L33; TIGRFAM: Ribosomal protein L33; IMG reference gene:2503958044; PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type; 50S ribosomal protein L33 2035337 10496055 Spico_1729 Sphaerochaeta coccoides DSM 17374 50S ribosomal protein L33 YP_004412309.1 2035161 R 760011 CDS YP_004412310.1 330837669 10496057 2035715..2036506 1 NC_015436.1 COGs: COG0647 sugar phosphatase of the HAD superfamily; InterPro IPR006357:IPR005834; KEGG: ssm:Spirs_3233 HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: Haloacid dehalogenase-like hydrolase, ; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; IMG reference gene:2503958046; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily subfamily IIA hydrolase, TIGR01457; Haloacid Dehalogenase Superfamily Class (subfamily) IIA; HAD-superfamily hydrolase 2036506 10496057 Spico_1730 Sphaerochaeta coccoides DSM 17374 HAD-superfamily hydrolase YP_004412310.1 2035715 D 760011 CDS YP_004412311.1 330837670 10496058 complement(2036581..2039826) 1 NC_015436.1 COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); InterProIPR006275:IPR005481:IPR005479:IPR005480:IPR 011607; KEGG: sta:STHERM_c07390 carbamoyl-phosphate synthase large chain; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Carbamoyl-phosphate synthetase, large subunit, oligomerisation; Methylglyoxal synthase-like domain; PRIAM: Carbamoyl-phosphate synthase (ammonia); SMART: Methylglyoxal synthase-like domain; SPTR: Carbamoyl-phosphate synthase large chain; TIGRFAM: Carbamoyl-phosphate synthase, large subunit; IMG reference gene:2503958047; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit; carbamoyl-phosphate synthase large subunit 2039826 10496058 Spico_1731 Sphaerochaeta coccoides DSM 17374 carbamoyl-phosphate synthase large subunit YP_004412311.1 2036581 R 760011 CDS YP_004412312.1 330837671 10496059 complement(2039810..2041030) 1 NC_015436.1 COGs: COG0505 Carbamoylphosphate synthase small subunit; InterPro IPR006274:IPR002474:IPR000991; KEGG: ssm:Spirs_3538 carbamoyl-phosphate synthase, small subunit; PFAM: Glutamine amidotransferase class-I, C-terminal; Carbamoyl-phosphate synthase, small subunit, N-terminal; PRIAM: Carbamoyl-phosphate synthase (glutamine-hydrolyzing); SPTR: Carbamoyl-phosphate synthase small chain; TIGRFAM: Carbamoyl-phosphate synthase, small subunit; IMG reference gene:2503958048; PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit; carbamoyl-phosphate synthase small subunit 2041030 10496059 Spico_1732 Sphaerochaeta coccoides DSM 17374 carbamoyl-phosphate synthase small subunit YP_004412312.1 2039810 R 760011 CDS YP_004412313.1 330837672 10496060 2041509..2043947 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR011110:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; Listeria/Bacterioides repeat; Two component regulator propeller; SPTR: uncharacterized protein; IMG reference gene:2503958049; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 2043947 10496060 Spico_1733 Sphaerochaeta coccoides DSM 17374 chromosome condensation regulator RCC1 YP_004412313.1 2041509 D 760011 CDS YP_004412314.1 330837673 10496061 complement(2044012..2046021) 1 NC_015436.1 InterPro IPR012480; KEGG: csh:Closa_4172 heparinase II/III family protein; PFAM: Heparinase II/III-like; SPTR: uncharacterized protein; IMG reference gene:2503958050; PFAM: Heparinase II/III-like protein; heparinase II/III family protein 2046021 10496061 Spico_1734 Sphaerochaeta coccoides DSM 17374 heparinase II/III family protein YP_004412314.1 2044012 R 760011 CDS YP_004412315.1 330837674 10496062 complement(2046045..2047229) 1 NC_015436.1 InterPro IPR010905; KEGG: rlg:Rleg_5051 glycosyl hydrolase 88; PFAM: Glycosyl hydrolase, family 88; SPTR: Glycosyl hydrolase 88; IMG reference gene:2503958051; PFAM: Glycosyl Hydrolase 88; glycosyl hydrolase 88 2047229 10496062 Spico_1735 Sphaerochaeta coccoides DSM 17374 glycosyl hydrolase 88 YP_004412315.1 2046045 R 760011 CDS YP_004412316.1 330837675 10496063 complement(2047301..2048137) 1 NC_015436.1 COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: avi:Avi_7346 ABC transporter membrane spanning protein (sugar); PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Sugar ABC transporter; IMG reference gene:2503958052; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 2 2048137 10496063 Spico_1736 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter membrane protein 2 YP_004412316.1 2047301 R 760011 CDS YP_004412317.1 330837676 10496064 complement(2048147..2049067) 1 NC_015436.1 COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: rle:pRL120664 permease component of ABC transporter; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Probable sugar ABC transporter, permease; IMG reference gene:2503958053; PFAM: Binding-protein-dependent transport system inner membrane component; carbohydrate ABC transporter membrane protein 1 2049067 10496064 Spico_1737 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter membrane protein 1 YP_004412317.1 2048147 R 760011 CDS YP_004412318.1 330837677 10496065 2049160..2049303 1 NC_015436.1 IMG reference gene:2503958054; hypothetical protein 2049303 10496065 Spico_1738 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412318.1 2049160 D 760011 CDS YP_004412319.1 330837678 10496066 complement(2049271..2050551) 1 NC_015436.1 COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: rec:RHECIAT_PC0000519 sugar ABC transporter, substrate-binding protein; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein, family 1; IMG reference gene:2503958055; PFAM: Bacterial extracellular solute-binding protein; carbohydrate ABC transporter substrate-binding protein 2050551 10496066 Spico_1739 Sphaerochaeta coccoides DSM 17374 carbohydrate ABC transporter substrate-binding protein YP_004412319.1 2049271 R 760011 CDS YP_004412320.1 330837679 10496067 2050820..2052622 1 NC_015436.1 COGs: COG2972 signal transduction protein with a C-terminal ATPase domain; InterPro IPR003660:IPR010559:IPR003594; KEGG: csh:Closa_1925 integral membrane sensor signal transduction histidine kinase; PFAM: Signal transduction histidine kinase, internal region; HAMP linker domain; ATPase-like, ATP-binding domain; SMART: HAMP linker domain; ATPase-like, ATP-binding domain; SPTR: uncharacterized protein; IMG reference gene:2503958056; PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; integral membrane sensor signal transduction histidine kinase 2052622 10496067 Spico_1740 Sphaerochaeta coccoides DSM 17374 integral membrane sensor signal transduction histidine kinase YP_004412320.1 2050820 D 760011 CDS YP_004412321.1 330837680 10496068 2052619..2054244 1 NC_015436.1 COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR001789:IPR000005:IPR018060; KEGG: csh:Closa_1924 two component transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; Signal transduction response regulator, receiver domain; SMART: Helix-turn-helix, AraC type, DNA binding domain; Signal transduction response regulator, receiver domain; SPTR: Two component transcriptional regulator; IMG reference gene:2503958057; PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family; AraC family transcriptional regulator 2054244 10496068 Spico_1741 Sphaerochaeta coccoides DSM 17374 AraC family transcriptional regulator YP_004412321.1 2052619 D 760011 CDS YP_004412322.1 330837681 10496069 2054241..2056163 1 NC_015436.1 InterPro IPR012480; KEGG: csh:Closa_1714 heparinase II/III family protein; PFAM: Heparinase II/III-like; SPTR: uncharacterized protein; IMG reference gene:2503958058; PFAM: Heparinase II/III-like protein; heparinase II/III family protein 2056163 10496069 Spico_1742 Sphaerochaeta coccoides DSM 17374 heparinase II/III family protein YP_004412322.1 2054241 D 760011 CDS YP_004412323.1 330837682 10496070 2056160..2056981 1 NC_015436.1 KEGG: ret:RHE_PF00314 hypothetical protein; SPTR: Hypothetical conserved protein; IMG reference gene:2503958059; hypothetical protein 2056981 10496070 Spico_1743 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412323.1 2056160 D 760011 CDS YP_004412324.1 330837683 10496071 2057029..2058324 1 NC_015436.1 COGs: COG1767 Triphosphoribosyl-dephospho-CoA synthetase; InterPro IPR005551:IPR002736; KEGG: aat:D11S_0857 apo-citrate lyase phosphoribosyl-dephospho-CoA transferase/2-(5-triphosphoribosyl)-3-dephosphocoenzyme-A synthase; PFAM: Triphosphoribosyl-dephospho-CoA protein; Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; SPTR: Holo-acyl-carrier-protein synthase; TIGRFAM: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; IMG reference gene:2503958060; PFAM: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; ATP:dephospho-CoA triphosphoribosyl transferase; TIGRFAM: holo-ACP synthase CitX; holo-ACP synthase 2058324 10496071 Spico_1744 Sphaerochaeta coccoides DSM 17374 holo-ACP synthase YP_004412324.1 2057029 D 760011 CDS YP_004412325.1 330837684 10496072 complement(2058350..2059366) 1 NC_015436.1 COGs: COG3053 Citrate lyase synthetase; InterPro IPR005216:IPR004821:IPR000182:IPR013166; KEGG: fnu:FN0319 citrate (pro-3S)-lyase ligase; PFAM: Citrate lyase ligase, C-terminal; GCN5-related N-acetyltransferase (GNAT) domain; PRIAM: [Citrate (pro-3S)-lyase] ligase; SMART: Citrate lyase ligase, C-terminal; SPTR: [citrate (Pro-3S)-lyase] ligase; TIGRFAM: Citrate lyase ligase; Cytidyltransferase-related; IMG reference gene:2503958061; PFAM: Citrate lyase ligase C-terminal domain; TIGRFAM: [citrate (pro-3S)-lyase] ligase; cytidyltransferase-related domain; citrate lyase ligase 2059366 10496072 Spico_1745 Sphaerochaeta coccoides DSM 17374 citrate lyase ligase YP_004412325.1 2058350 R 760011 CDS YP_004412326.1 330837685 10496073 complement(2059489..2060637) 1 NC_015436.1 COGs: COG3180 ammonia monooxygenase; InterPro IPR017516:IPR007820; KEGG: sds:SDEG_0995 ammonia monooxygenase; PFAM: ammonia monooxygenase; SPTR: uncharacterized protein; TIGRFAM: AbrB duplication, membrane protein; IMG reference gene:2503958062; PFAM: ammonia monooxygenase; TIGRFAM: membrane protein AbrB duplication; membrane protein AbrB 2060637 10496073 Spico_1746 Sphaerochaeta coccoides DSM 17374 membrane protein AbrB YP_004412326.1 2059489 R 760011 CDS YP_004412327.1 330837686 10496074 complement(2060818..2062197) 1 NC_015436.1 COGs: COG2851 H+/citrate symporter; InterPro IPR014738:IPR004680; KEGG: lsa:LSA1232 citrate:Mg(2+)(H+) symporter; PFAM: Divalent ion symporter; SPTR: Citrate:Mg(2+)(H+) symporter; TIGRFAM: Citrate transporter; IMG reference gene:2503958063; PFAM: Citrate transporter; TIGRFAM: citrate transporter, CitMHS family; CitMHS family citrate/H+ symporter 2062197 10496074 Spico_1747 Sphaerochaeta coccoides DSM 17374 CitMHS family citrate/H+ symporter YP_004412327.1 2060818 R 760011 CDS YP_004412328.1 330837687 10496075 complement(2062409..2063959) 1 NC_015436.1 COGs: COG3051 Citrate lyase alpha subunit; InterPro IPR006472; KEGG: afn:Acfer_0408 citrate lyase, alpha subunit; PFAM: Citrate lyase, alpha subunit; PRIAM: Citrate CoA-transferase; SPTR: Citrate lyase, alpha subunit; TIGRFAM: Citrate lyase, alpha subunit; IMG reference gene:2503958064; PFAM: Citrate lyase, alpha subunit (CitF); TIGRFAM: citrate lyase, alpha subunit; citrate lyase subunit alpha 2063959 10496075 Spico_1748 Sphaerochaeta coccoides DSM 17374 citrate lyase subunit alpha YP_004412328.1 2062409 R 760011 CDS YP_004412329.1 330837688 10496076 complement(2063956..2064861) 1 NC_015436.1 COGs: COG2301 Citrate lyase beta subunit; InterPro IPR005000; KEGG: afn:Acfer_0409 citrate (pro-3S)-lyase; PFAM: Aldehyde-lyase domain; PRIAM: Citryl-CoA lyase; SPTR: Citrate lyase, beta subunit; IMG reference gene:2503958065; PFAM: HpcH/HpaI aldolase/citrate lyase; TIGRFAM: citrate lyase, beta subunit; citryl-CoA lyase 2064861 10496076 Spico_1749 Sphaerochaeta coccoides DSM 17374 citryl-CoA lyase YP_004412329.1 2063956 R 760011 CDS YP_004412330.1 330837689 10496077 complement(2064858..2065154) 1 NC_015436.1 COGs: COG3052 Citrate lyase gamma subunit; HAMAP: Citrate lyase acyl carrier protein CitD; InterPro IPR006495; KEGG: afn:Acfer_0410 citrate lyase acyl carrier protein; SPTR: Citrate lyase acyl carrier protein; TIGRFAM: Citrate lyase acyl carrier protein CitD; IMG reference gene:2503958066; PFAM: Malonate decarboxylase delta subunit (MdcD); TIGRFAM: citrate lyase acyl carrier protein; Citrate lyase acyl carrier protein 2065154 10496077 Spico_1750 Sphaerochaeta coccoides DSM 17374 Citrate lyase acyl carrier protein YP_004412330.1 2064858 R 760011 CDS YP_004412331.1 330837690 10496078 2065268..2066221 1 NC_015436.1 COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR005119; KEGG: cac:CA_C1046 LysR family transcriptional regulator; PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; SPTR: Transcriptional regulator; manually curated; IMG reference gene:2503958067; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; LysR family transcriptional regulator 2066221 10496078 Spico_1751 Sphaerochaeta coccoides DSM 17374 LysR family transcriptional regulator YP_004412331.1 2065268 D 760011 CDS YP_004412332.1 330837691 10496079 2066372..2066992 1 NC_015436.1 COGs: COG0605 Superoxide dismutase; InterPro IPR019831:IPR019832; KEGG: csh:Closa_3787 manganese/iron superoxide dismutase-like protein; PFAM: Manganese/iron superoxide dismutase, C-terminal; Manganese/iron superoxide dismutase, N-terminal; SPTR: Superoxide dismutase; IMG reference gene:2503958068; PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain; manganese/iron superoxide dismutase 2066992 10496079 Spico_1752 Sphaerochaeta coccoides DSM 17374 manganese/iron superoxide dismutase YP_004412332.1 2066372 D 760011 CDS YP_004412333.1 330837692 10496080 2067354..2069477 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; IMG reference gene:2503958069; PFAM: Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 2069477 10496080 Spico_1753 Sphaerochaeta coccoides DSM 17374 chromosome condensation regulator RCC1 YP_004412333.1 2067354 D 760011 CDS YP_004412334.1 330837693 10496081 2069686..2070207 1 NC_015436.1 KEGG: bmq:BMQ_1790 secreted protein; SPTR: secreted protein; IMG reference gene:2503958070; hypothetical protein 2070207 10496081 Spico_1754 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412334.1 2069686 D 760011 CDS YP_004412335.1 330837694 10496082 complement(2070413..2071510) 1 NC_015436.1 COGs: COG0641 Arylsulfatase regulator (Fe-S oxidoreductase); InterPro IPR007197; KEGG: str:Sterm_2101 radical SAM domain protein; PFAM: Radical SAM; SPTR: uncharacterized protein; IMG reference gene:2503958071; PFAM: Radical SAM superfamily; TIGRFAM: anaerobic sulfatase-maturating enzyme; radical SAM additional 4Fe4S-binding domain; radical SAM protein 2071510 10496082 Spico_1755 Sphaerochaeta coccoides DSM 17374 radical SAM protein YP_004412335.1 2070413 R 760011 CDS YP_004412336.1 330837695 10496083 complement(2071507..2072355) 1 NC_015436.1 InterPro IPR002781; KEGG: ssm:Spirs_3034 protein of unknown function DUF81; PFAM: Protein of unknown function DUF81; SPTR: uncharacterized protein; IMG reference gene:2503958072; PFAM: Sulfite exporter TauE/SafE; hypothetical protein 2072355 10496083 Spico_1756 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412336.1 2071507 R 760011 CDS YP_004412337.1 330837696 10496084 complement(2072548..2073615) 1 NC_015436.1 COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; KEGG: tte:TTE1809 alpha/beta fold family hydrolase; SPTR: Peptidoglycan-binding lysin domain protein; IMG reference gene:2503958073; PFAM: Prolyl oligopeptidase; hypothetical protein 2073615 10496084 Spico_1757 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412337.1 2072548 R 760011 CDS YP_004412338.1 330837697 10496085 complement(2073882..2074805) 1 NC_015436.1 COGs: COG0031 Cysteine synthase; InterPro IPR005856:IPR005859:IPR001926; KEGG: geo:Geob_2530 cysteine synthase A; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; PRIAM: Cysteine synthase; SPTR: Cysteine synthase; TIGRFAM: Cysteine synthase A; Cysteine synthase K/M; IMG reference gene:2503958074; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases; cysteine synthase 2074805 10496085 Spico_1758 Sphaerochaeta coccoides DSM 17374 cysteine synthase YP_004412338.1 2073882 R 760011 CDS YP_004412339.1 330837698 10496086 complement(2074980..2075930) 1 NC_015436.1 COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: dac:Daci_3532 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator, AraC family protein; IMG reference gene:2503958075; AraC family transcriptional regulator 2075930 10496086 Spico_1759 Sphaerochaeta coccoides DSM 17374 AraC family transcriptional regulator YP_004412339.1 2074980 R 760011 CDS YP_004412340.1 330837699 10496087 complement(2075911..2076381) 1 NC_015436.1 COGs: COG0822 NifU homolog involved in Fe-S cluster formation; InterPro IPR011341:IPR002871; KEGG: cbe:Cbei_1852 NifU family SUF system FeS assembly protein; PFAM: NIF system FeS cluster assembly, NifU, N-terminal; SPTR: SUF system FeS assembly protein, NifU family; TIGRFAM: SUF system FeS cluster assembly, SufU scaffold; IMG reference gene:2503958076; PFAM: NifU-like N terminal domain; TIGRFAM: SUF system FeS assembly protein, NifU family; NifU family SUF system FeS assembly protein 2076381 10496087 Spico_1760 Sphaerochaeta coccoides DSM 17374 NifU family SUF system FeS assembly protein YP_004412340.1 2075911 R 760011 CDS YP_004412341.1 330837700 10496088 complement(2076371..2077627) 1 NC_015436.1 COGs: COG0520 Selenocysteine lyase; InterPro IPR010970:IPR000192; KEGG: cac:CA_C3291 selenocysteine lyase; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Cysteine desulfurase; SPTR: Cysteine desulfurase; TIGRFAM: Cysteine desulfurase, SufS; IMG reference gene:2503958077; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufS subfamily; cysteine desulfurase 2077627 10496088 Spico_1761 Sphaerochaeta coccoides DSM 17374 cysteine desulfurase YP_004412341.1 2076371 R 760011 CDS YP_004412342.1 330837701 10496089 complement(2077624..2078724) 1 NC_015436.1 COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR000825; KEGG: cac:CA_C3290 iron-regulated ABC-type transporter membrane component (SufB); PFAM: SUF system FeS cluster assembly, SufBD; SPTR: FeS assembly protein SufD; IMG reference gene:2503958078; PFAM: Uncharacterized protein family (UPF0051); SufBD protein 2078724 10496089 Spico_1762 Sphaerochaeta coccoides DSM 17374 SufBD protein YP_004412342.1 2077624 R 760011 CDS YP_004412343.1 330837702 10496090 complement(2078733..2080151) 1 NC_015436.1 COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR010231:IPR000825; KEGG: cbe:Cbei_1849 FeS assembly protein SufB; PFAM: SUF system FeS cluster assembly, SufBD; SPTR: FeS assembly protein SufB; TIGRFAM: SUF system FeS cluster assembly, SufB; IMG reference gene:2503958079; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB; Iron-regulated ABC transporter membrane component SufB 2080151 10496090 Spico_1763 Sphaerochaeta coccoides DSM 17374 Iron-regulated ABC transporter membrane component SufB YP_004412343.1 2078733 R 760011 CDS YP_004412344.1 330837703 10496091 complement(2080156..2080905) 1 NC_015436.1 COGs: COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component; InterPro IPR010230:IPR003439:IPR003593; KEGG: vpr:Vpar_1031 FeS assembly ATPase SufC; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: FeS assembly ATPase SufC; TIGRFAM: ATPase SufC, SUF system FeS cluster assembly; IMG reference gene:2503958080; PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC; Iron-regulated ABC transporter ATPase subunit SufC 2080905 10496091 Spico_1764 Sphaerochaeta coccoides DSM 17374 Iron-regulated ABC transporter ATPase subunit SufC YP_004412344.1 2080156 R 760011 CDS YP_004412345.1 330837704 10496092 complement(2081135..2082217) 1 NC_015436.1 COGs: COG0208 Ribonucleotide reductase beta subunit; InterPro IPR000358; KEGG: tde:TDE0335 ribonucleotide-diphosphate reductase subunit beta; PFAM: Ribonucleotide reductase; SPTR: Ribonucleoside-diphosphate reductase, beta subunit; IMG reference gene:2503958081; PFAM: Ribonucleotide reductase, small chain; ribonucleotide reductase 2082217 10496092 Spico_1765 Sphaerochaeta coccoides DSM 17374 ribonucleotide reductase YP_004412345.1 2081135 R 760011 CDS YP_004412346.1 330837705 10496093 complement(2082281..2084827) 1 NC_015436.1 InterPro IPR013346:IPR005144:IPR013509:IPR000788; KEGG: tde:TDE0341 ribonucleotide-diphosphate reductase subunit alpha; PFAM: Ribonucleotide reductase large subunit, C-terminal; Ribonucleotide reductase large subunit, N-terminal; ATP-cone; SPTR: Ribonucleoside-diphosphate reductase; TIGRFAM: Ribonucleoside-diphosphate reductase, alpha subunit; IMG reference gene:2503958082; PFAM: Ribonucleotide reductase, all-alpha domain; ATP cone domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; ribonucleoside-diphosphate reductase subunit alpha 2084827 10496093 Spico_1766 Sphaerochaeta coccoides DSM 17374 ribonucleoside-diphosphate reductase subunit alpha YP_004412346.1 2082281 R 760011 CDS YP_004412347.1 330837706 10496094 2085219..2086775 1 NC_015436.1 COGs: COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful); HAMAP: AICARFT/IMPCHase bienzyme; InterPro IPR002695:IPR011607:IPR013982; KEGG: sul:SYO3AOP1_1066 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme, transformylase domain; Methylglyoxal synthase-like domain; PRIAM: Phosphoribosylaminoimidazolecarboxamide formyltransferase; SMART: AICARFT/IMPCHase bienzyme, transformylase domain; Methylglyoxal synthase-like domain; SPTR: Bifunctional purine biosynthesis protein purH; TIGRFAM: AICARFT/IMPCHase bienzyme; IMG reference gene:2503958083; PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; IMP cyclohydrolase 2086775 10496094 Spico_1767 Sphaerochaeta coccoides DSM 17374 IMP cyclohydrolase YP_004412347.1 2085219 D 760011 CDS YP_004412348.1 330837707 10496095 complement(2086852..2088186) 1 NC_015436.1 COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR006097:IPR006096; KEGG: ssm:Spirs_3994 glutamate dehydrogenase (NADP(+)); PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain; PRIAM: Glutamate dehydrogenase (NADP(+)); SMART: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; SPTR: NAD dependent glutamate dehydrogenase 1; IMG reference gene:2503958084; PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; glutamate dehydrogenase 2088186 10496095 Spico_1768 Sphaerochaeta coccoides DSM 17374 glutamate dehydrogenase YP_004412348.1 2086852 R 760011 CDS YP_004412349.1 330837708 10496096 complement(2088603..2090294) 1 NC_015436.1 COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing); InterPro IPR006426:IPR000583:IPR001962; KEGG: fba:FIC_01692 asparagine synthetase B; PFAM: Asparagine synthase; Glutamine amidotransferase, class-II; PRIAM: Asparagine synthase (glutamine-hydrolyzing); SPTR: Asparagine synthetase (Glutamine-hydrolyzing); TIGRFAM: Asparagine synthase, glutamine-hydrolyzing; IMG reference gene:2503958085; PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); asparagine synthase 2090294 10496096 Spico_1769 Sphaerochaeta coccoides DSM 17374 asparagine synthase YP_004412349.1 2088603 R 760011 CDS YP_004412350.1 330837709 10496097 2090539..2092890 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; Listeria/Bacterioides repeat; SPTR: uncharacterized protein; IMG reference gene:2503958086; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 2092890 10496097 Spico_1770 Sphaerochaeta coccoides DSM 17374 chromosome condensation regulator RCC1 YP_004412350.1 2090539 D 760011 CDS YP_004412351.1 330837710 10496098 complement(2092971..2094182) 1 NC_015436.1 COGs: COG4992 Ornithine/acetylornithine aminotransferase; HAMAP: Acetylornithine/succinyldiaminopimelate aminotransferase; InterPro IPR004636:IPR005814; KEGG: eel:EUBELI_00596 acetylornithine aminotransferase; PFAM: Aminotransferase class-III; PRIAM: Acetylornithine transaminase; SPTR: Acetylornithine aminotransferase; TIGRFAM: Acetylornithine/succinylornithine aminotransferase; IMG reference gene:2503958087; PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine aminotransferases; Acetylornithine/succinyldiaminopimelate aminotransferase 2094182 10496098 Spico_1771 Sphaerochaeta coccoides DSM 17374 Acetylornithine/succinyldiaminopimelate aminotransferase YP_004412351.1 2092971 R 760011 CDS YP_004412352.1 330837711 10496099 complement(2094179..2095108) 1 NC_015436.1 COGs: COG0548 Acetylglutamate kinase; InterPro IPR004662:IPR001048; KEGG: tmt:Tmath_2088 acetylglutamate kinase; PFAM: Aspartate/glutamate/uridylate kinase; PRIAM: Acetylglutamate kinase; SPTR: Acetylglutamate kinase; TIGRFAM: Acetylglutamate kinase; IMG reference gene:2503958088; PFAM: Amino acid kinase; TIGRFAM: acetylglutamate kinase; N-acetylglutamate kinase 2095108 10496099 Spico_1772 Sphaerochaeta coccoides DSM 17374 N-acetylglutamate kinase YP_004412352.1 2094179 R 760011 CDS YP_004412353.1 330837712 10496100 complement(2095115..2096401) 1 NC_015436.1 COGs: COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase); HAMAP: Arginine biosynthesis protein ArgJ; InterPro IPR002813; KEGG: sth:STH2890 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase; PFAM: Arginine biosynthesis protein ArgJ; PRIAM: Amino-acid N-acetyltransferase; SPTR: uncharacterized protein; TIGRFAM: Arginine biosynthesis protein ArgJ; IMG reference gene:2503958089; PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase; N-acetylglutamate synthase 2096401 10496100 Spico_1773 Sphaerochaeta coccoides DSM 17374 N-acetylglutamate synthase YP_004412353.1 2095115 R 760011 CDS YP_004412354.1 330837713 10496101 complement(2096415..2097467) 1 NC_015436.1 COGs: COG0002 Acetylglutamate semialdehyde dehydrogenase; HAMAP: N-acetyl-gamma-glutamyl-phosphate reductase, type 1; InterPro IPR000706:IPR000534:IPR012280; KEGG: bpb:bpr_I1813 N-acetyl-gamma-glutamyl-phosphate reductase ArgC; PFAM: Semialdehyde dehydrogenase, NAD-binding; Semialdehyde dehydrogenase, dimerisation domain; PRIAM: N-acetyl-gamma-glutamyl-phosphate reductase; SMART: Semialdehyde dehydrogenase, NAD-binding; SPTR: N-acetyl-gamma-glutamyl-phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, type 1; IMG reference gene:2503958090; PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form; N-acetyl-gamma-glutamyl-phosphate reductase 2097467 10496101 Spico_1774 Sphaerochaeta coccoides DSM 17374 N-acetyl-gamma-glutamyl-phosphate reductase YP_004412354.1 2096415 R 760011 CDS YP_004412355.1 330837714 10496102 2097703..2098833 1 NC_015436.1 COGs: COG1929 Glycerate kinase; InterPro IPR004381; KEGG: cth:Cthe_1592 glycerate kinase; PFAM: Glycerate kinase; PRIAM: Glycerate kinase; SPTR: uncharacterized protein; TIGRFAM: Glycerate kinase; IMG reference gene:2503958091; PFAM: Glycerate kinase; TIGRFAM: glycerate kinase; glycerate kinase 2098833 10496102 Spico_1775 Sphaerochaeta coccoides DSM 17374 glycerate kinase YP_004412355.1 2097703 D 760011 CDS YP_004412356.1 330837715 10496103 complement(2098822..2100195) 1 NC_015436.1 COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR002218; KEGG: csh:Closa_4238 glucose-inhibited division protein A; PFAM: Glucose-inhibited division protein A-related; SPTR: Glucose-inhibited division protein A; IMG reference gene:2503958092; PFAM: Pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A 2100195 10496103 Spico_1776 Sphaerochaeta coccoides DSM 17374 glucose-inhibited division protein A YP_004412356.1 2098822 R 760011 CDS YP_004412357.1 330837716 10496104 complement(2100176..2100865) 1 NC_015436.1 KEGG: csh:Closa_4239 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503958093; hypothetical protein 2100865 10496104 Spico_1777 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412357.1 2100176 R 760011 CDS YP_004412358.1 330837717 10496105 complement(2100914..2103067) 1 NC_015436.1 COGs: COG0145 N-methylhydantoinase A/acetone carboxylase beta subunit; InterPro IPR008040:IPR002821; KEGG: csh:Closa_4240 hydantoinase/oxoprolinase; PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; SPTR: Hydantoinase/oxoprolinase; IMG reference gene:2503958094; PFAM: Hydantoinase/oxoprolinase; Hydantoinase/oxoprolinase N-terminal region; hydantoinase/oxoprolinase 2103067 10496105 Spico_1778 Sphaerochaeta coccoides DSM 17374 hydantoinase/oxoprolinase YP_004412358.1 2100914 R 760011 CDS YP_004412359.1 330837718 10496106 complement(2103102..2104406) 1 NC_015436.1 InterPro IPR010656; KEGG: csh:Closa_4241 C4-dicarboxylate anaerobic carrier-like protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: C4-dicarboxylate anaerobic carrier-like protein; IMG reference gene:2503958095; PFAM: Citrate transporter; TRAP dicarboxylate transporter subunit DctM 2104406 10496106 Spico_1779 Sphaerochaeta coccoides DSM 17374 TRAP dicarboxylate transporter subunit DctM YP_004412359.1 2103102 R 760011 CDS YP_004412360.1 330837719 10496107 complement(2104521..2105216) 1 NC_015436.1 KEGG: csh:Closa_4242 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503958096; hypothetical protein 2105216 10496107 Spico_1780 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412360.1 2104521 R 760011 CDS YP_004412361.1 330837720 10496108 complement(2105250..2106311) 1 NC_015436.1 KEGG: csh:Closa_4243 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503958097; hypothetical protein 2106311 10496108 Spico_1781 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412361.1 2105250 R 760011 CDS YP_004412362.1 330837721 10496109 complement(2106622..2108709) 1 NC_015436.1 COGs: COG3968 Uncharacterized protein related to glutamine synthetase; InterPro IPR008146; KEGG: cth:Cthe_0196 glutamine synthetase, catalytic region; PFAM: Glutamine synthetase, catalytic domain; PRIAM: Glutamate--ammonia ligase; SPTR: uncharacterized protein; IMG reference gene:2503958098; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase type III N terminal; L-glutamine synthetase 2108709 10496109 Spico_1782 Sphaerochaeta coccoides DSM 17374 L-glutamine synthetase YP_004412362.1 2106622 R 760011 CDS YP_004412363.1 330837722 10496110 2109023..2109592 1 NC_015436.1 InterPro IPR005561; KEGG: cth:Cthe_0203 response regulator receiver/ANTAR domain-containing protein; PFAM: ANTAR; SPTR: uncharacterized protein; IMG reference gene:2503958099; PFAM: ANTAR domain; ANTAR domain-containing protein 2109592 10496110 Spico_1783 Sphaerochaeta coccoides DSM 17374 ANTAR domain-containing protein YP_004412363.1 2109023 D 760011 CDS YP_004412364.1 330837723 10496111 2109627..2111237 1 NC_015436.1 COGs: COG0504 CTP synthase (UTP-ammonia lyase); HAMAP: CTP synthase; InterPro IPR004468:IPR017456:IPR000991; KEGG: clj:CLJU_c02200 CTP synthase; PFAM: CTP synthase, N-terminal; Glutamine amidotransferase class-I, C-terminal; PRIAM: CTP synthase; SPTR: CTP synthase; TIGRFAM: CTP synthase; IMG reference gene:2503958100; PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase; CTP synthase 2111237 10496111 Spico_1784 Sphaerochaeta coccoides DSM 17374 CTP synthase YP_004412364.1 2109627 D 760011 CDS YP_004412365.1 330837724 10496112 2111423..2111893 1 NC_015436.1 COGs: COG1438 Arginine repressor; HAMAP: Arginine repressor; InterPro IPR001669:IPR020900:IPR020899; KEGG: ssm:Spirs_3243 arginine repressor, ArgR; PFAM: Arginine repressor, DNA-binding domain; Arginine repressor, C-terminal; SPTR: Arginine repressor; IMG reference gene:2503958101; PFAM: Arginine repressor, C-terminal domain; Arginine repressor, DNA binding domain; TIGRFAM: arginine repressor; arginine repressor ArgR 2111893 10496112 Spico_1785 Sphaerochaeta coccoides DSM 17374 arginine repressor ArgR YP_004412365.1 2111423 D 760011 CDS YP_004412366.1 330837725 10496113 2111970..2113553 1 NC_015436.1 COGs: COG0166 Glucose-6-phosphate isomerase; HAMAP: Phosphoglucose isomerase (PGI); InterPro IPR001672; KEGG: ssm:Spirs_3245 phosphoglucose isomerase (PGI); PFAM: Phosphoglucose isomerase (PGI); PRIAM: Glucose-6-phosphate isomerase; SPTR: Glucose-6-phosphate isomerase; IMG reference gene:2503958102; PFAM: Phosphoglucose isomerase; glucose-6-phosphate isomerase 2113553 10496113 Spico_1786 Sphaerochaeta coccoides DSM 17374 glucose-6-phosphate isomerase YP_004412366.1 2111970 D 760011 CDS YP_004412367.1 330837726 10496114 complement(2113677..2113874) 1 NC_015436.1 SPTR: uncharacterized protein; IMG reference gene:2503958103; hypothetical protein 2113874 10496114 Spico_1787 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412367.1 2113677 R 760011 CDS YP_004412368.1 330837727 10496115 complement(2113925..2115253) 1 NC_015436.1 COGs: COG0205 6-phosphofructokinase; InterPro IPR000023; KEGG: ssm:Spirs_3247 phosphofructokinase; PFAM: Phosphofructokinase domain; PRIAM: 6-phosphofructokinase; SPTR: Diphosphate--fructose-6-phosphate 1-phosphotransferase; IMG reference gene:2503958104; PFAM: Phosphofructokinase; 6-phosphofructokinase 2115253 10496115 Spico_1788 Sphaerochaeta coccoides DSM 17374 6-phosphofructokinase YP_004412368.1 2113925 R 760011 CDS YP_004412369.1 330837728 10496116 complement(2115387..2116721) 1 NC_015436.1 COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: ssm:Spirs_1023 aminotransferase class I and II; PFAM: Aminotransferase, class I/classII; SPTR: Aminotransferase; IMG reference gene:2503958105; PFAM: Aminotransferase class I and II; class I and II aminotransferase 2116721 10496116 Spico_1789 Sphaerochaeta coccoides DSM 17374 class I and II aminotransferase YP_004412369.1 2115387 R 760011 CDS YP_004412370.1 330837729 10496117 complement(2116721..2118871) 1 NC_015436.1 COGs: COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); HAMAP: NAD-dependent DNA ligase; InterProIPR001679:IPR013839:IPR004150:IPR004149:IPR 001357:IPR013840; KEGG: ssm:Spirs_1336 DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase, adenylation; NAD-dependent DNA ligase, OB-fold; Zinc-finger, NAD-dependent DNA ligase C4-type; BRCT; PRIAM: DNA ligase (NAD(+)); SMART: NAD-dependent DNA ligase, N-terminal; BRCT; SPTR: DNA ligase; TIGRFAM: NAD-dependent DNA ligase; IMG reference gene:2503958106; PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; NAD-dependent DNA ligase C4 zinc finger domain; BRCA1 C Terminus (BRCT) domain; TIGRFAM: DNA ligase, NAD-dependent; DNA ligase 2118871 10496117 Spico_1790 Sphaerochaeta coccoides DSM 17374 DNA ligase YP_004412370.1 2116721 R 760011 CDS YP_004412371.1 330837730 10496118 2119145..2119648 1 NC_015436.1 KEGG: bcb:BCB4264_A2969 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503958107; hypothetical protein 2119648 10496118 Spico_1791 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412371.1 2119145 D 760011 CDS YP_004412372.1 330837731 10496119 2119832..2121859 1 NC_015436.1 COGs: COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs; InterPro IPR008274; KEGG: ssm:Spirs_1330 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; SPTR: Aldehyde oxidase and xanthine dehydrogenase; IMG reference gene:2503958108; PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; aldehyde oxidase 2121859 10496119 Spico_1792 Sphaerochaeta coccoides DSM 17374 aldehyde oxidase YP_004412372.1 2119832 D 760011 CDS YP_004412373.1 330837732 10496120 2121862..2122410 1 NC_015436.1 KEGG: gga:417314 dynein, axonemal, heavy chain 9; SPTR: GE19955; IMG reference gene:2503958109; hypothetical protein 2122410 10496120 Spico_1793 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412373.1 2121862 D 760011 CDS YP_004412374.1 330837733 10496121 2122394..2123278 1 NC_015436.1 COGs: COG1319 Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM/CutM homologs; InterPro IPR002346; KEGG: ssm:Spirs_1328 molybdopterin dehydrogenase FAD-binding protein; PFAM: Molybdopterin dehydrogenase, FAD-binding; SPTR: xanthine dehydrogenase subunit, FAD-binding domain protein; IMG reference gene:2503958110; PFAM: FAD binding domain in molybdopterin dehydrogenase; molybdopterin dehydrogenase FAD-binding protein 2123278 10496121 Spico_1794 Sphaerochaeta coccoides DSM 17374 molybdopterin dehydrogenase FAD-binding protein YP_004412374.1 2122394 D 760011 CDS YP_004412375.1 330837734 10496122 2123351..2126863 1 NC_015436.1 COGs: COG0587 DNA polymerase III alpha subunit; InterProIPR004805:IPR004013:IPR011708:IPR004365:IPR 003141; KEGG: ssm:Spirs_1327 DNA polymerase III, alpha subunit; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; PRIAM: DNA-directed DNA polymerase; SMART: Polymerase/histidinol phosphatase, N-terminal; SPTR: DNA polymerase III subunit alpha; TIGRFAM: DNA polymerase III, alpha subunit; IMG reference gene:2503958111; PFAM: Bacterial DNA polymerase III alpha subunit; PHP domain; TIGRFAM: DNA-directed DNA polymerase III (polc); DNA polymerase III subunit alpha 2126863 10496122 Spico_1795 Sphaerochaeta coccoides DSM 17374 DNA polymerase III subunit alpha YP_004412375.1 2123351 D 760011 CDS YP_004412376.1 330837735 10496123 2126872..2127507 1 NC_015436.1 InterPro IPR003425; KEGG: ssm:Spirs_1326 protein of unknown function YGGT; PFAM: Uncharacterised protein family Ycf19; SPTR: uncharacterized protein; IMG reference gene:2503958112; PFAM: YGGT family; hypothetical protein 2127507 10496123 Spico_1796 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412376.1 2126872 D 760011 CDS YP_004412377.1 330837736 10496124 2127543..2129642 1 NC_015436.1 COGs: COG1200 RecG-like helicase; InterPro IPR004609:IPR011545:IPR001650:IPR014001; KEGG: ssm:Spirs_1325 ATP-dependent DNA helicase RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: ATP-dependent DNA helicase RecG; TIGRFAM: DNA helicase, ATP-dependent, RecG; IMG reference gene:2503958113; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG; ATP-dependent DNA helicase RecG 2129642 10496124 Spico_1797 Sphaerochaeta coccoides DSM 17374 ATP-dependent DNA helicase RecG YP_004412377.1 2127543 D 760011 CDS YP_004412378.1 330837737 10496125 2129783..2130385 1 NC_015436.1 COGs: COG0742 N6-adenine-specific methylase; InterPro IPR004398; KEGG: ssm:Spirs_1324 methyltransferase; PFAM: RNA methyltransferase, RsmD; SPTR: Methyltransferase, ; TIGRFAM: RNA methyltransferase, RsmD; IMG reference gene:2503958114; PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family; methyltransferase 2130385 10496125 Spico_1798 Sphaerochaeta coccoides DSM 17374 methyltransferase YP_004412378.1 2129783 D 760011 CDS YP_004412379.1 330837738 10496126 2130378..2131250 1 NC_015436.1 COGs: COG3884 Acyl-ACP thioesterase; InterPro IPR002864; KEGG: dvm:DvMF_1428 acyl-ACP thioesterase; PFAM: Acyl-ACP thioesterase; SPTR: Acyl-ACP thioesterase; IMG reference gene:2503958115; PFAM: Acyl-ACP thioesterase; acyl-ACP thioesterase 2131250 10496126 Spico_1799 Sphaerochaeta coccoides DSM 17374 acyl-ACP thioesterase YP_004412379.1 2130378 D 760011 CDS YP_004412380.1 330837739 10496127 complement(2131271..2131477) 1 NC_015436.1 InterPro IPR007236; KEGG: abo:ABO_2672 hypothetical protein; PFAM: SlyX; SPTR: uncharacterized protein; IMG reference gene:2503958116; PFAM: SlyX; SlyX family protein 2131477 10496127 Spico_1800 Sphaerochaeta coccoides DSM 17374 SlyX family protein YP_004412380.1 2131271 R 760011 CDS YP_004412381.1 330837740 10496128 2131667..2131831 1 NC_015436.1 COGs: COG1773 Rubredoxin; InterPro IPR004039; KEGG: sta:STHERM_c04700 rubredoxin; PFAM: Rubredoxin-type Fe(Cys)4 protein; SPTR: Rubredoxin; IMG reference gene:2503958117; PFAM: Rubredoxin; rubredoxin-type Fe(Cys)4 protein 2131831 10496128 Spico_1801 Sphaerochaeta coccoides DSM 17374 rubredoxin-type Fe(Cys)4 protein YP_004412381.1 2131667 D 760011 CDS YP_004412382.1 330837741 10496129 2132195..2134396 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; IMG reference gene:2503958118; PFAM: Regulator of chromosome condensation (RCC1) repeat; hypothetical protein 2134396 10496129 Spico_1802 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412382.1 2132195 D 760011 CDS YP_004412383.1 330837742 10496130 2134598..2135404 1 NC_015436.1 COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: csh:Closa_0385 nitroreductase; PFAM: Nitroreductase-like; SPTR: Oxygen-insensitive NADPH nitroreductase; IMG reference gene:2503958119; PFAM: Nitroreductase; nitroreductase 2135404 10496130 Spico_1803 Sphaerochaeta coccoides DSM 17374 nitroreductase YP_004412383.1 2134598 D 760011 CDS YP_004412384.1 330837743 10496131 complement(2135585..2136628) 1 NC_015436.1 COGs: COG1619 conserved hypothetical protein; InterPro IPR003507; KEGG: cbl:CLK_2168 LD-carboxypeptidase; PFAM: Peptidase S66, LD-carboxypeptidase A; SPTR: LD-carboxypeptidase; IMG reference gene:2503958120; PFAM: LD-carboxypeptidase; peptidase U61 2136628 10496131 Spico_1804 Sphaerochaeta coccoides DSM 17374 peptidase U61 YP_004412384.1 2135585 R 760011 CDS YP_004412385.1 330837744 10496132 complement(2136784..2140320) 1 NC_015436.1 COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR011895:IPR002880:IPR019752:IPR019456:IPR 001450:IPR011766; KEGG: mta:Moth_0064 pyruvate:ferredoxin (flavodoxin) oxidoreductase; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; PRIAM: Pyruvate dehydrogenase (NADP(+)); SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain; SPTR: Pyruvate-flavodoxin oxidoreductase; TIGRFAM: Pyruvate-flavodoxin oxidoreductase; IMG reference gene:2503958121; PFAM: Domain of unknown function; domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; pyruvate ferredoxin/flavodoxin oxidoreductase 2140320 10496132 Spico_1805 Sphaerochaeta coccoides DSM 17374 pyruvate ferredoxin/flavodoxin oxidoreductase YP_004412385.1 2136784 R 760011 CDS YP_004412386.1 330837745 10496133 complement(2140502..2141578) 1 NC_015436.1 COGs: COG1363 Cellulase M and related protein; InterPro IPR008007; KEGG: amu:Amuc_1103 glutamyl aminopeptidase; PFAM: Peptidase M42; PRIAM: Glutamyl aminopeptidase; SPTR: Glutamyl aminopeptidase; IMG reference gene:2503958122; PFAM: M42 glutamyl aminopeptidase; glutamyl aminopeptidase 2141578 10496133 Spico_1806 Sphaerochaeta coccoides DSM 17374 glutamyl aminopeptidase YP_004412386.1 2140502 R 760011 CDS YP_004412387.1 330837746 10496134 complement(2141773..2143245) 1 NC_015436.1 COGs: COG5476 conserved hypothetical protein; InterPro IPR015995:IPR010799; KEGG: ssm:Spirs_1401 microcystin LR degradation protein MlrC; PFAM: Microcystin LR degradation protein MlrC, N-terminal; Microcystin LR degradation protein MlrC, C-terminal; SPTR: MlrC domain protein; IMG reference gene:2503958123; PFAM: MlrC C-terminus; Protein of unknown function (DUF1485); microcystin LR degradation protein MlrC 2143245 10496134 Spico_1807 Sphaerochaeta coccoides DSM 17374 microcystin LR degradation protein MlrC YP_004412387.1 2141773 R 760011 CDS YP_004412388.1 330837747 10496135 complement(2143301..2144050) 1 NC_015436.1 COGs: COG3142 Uncharacterized protein involved in copper resistance; InterPro IPR005627; KEGG: ssm:Spirs_1399 CutC family protein; PFAM: CutC; SPTR: CutC family protein Copper transport; IMG reference gene:2503958124; PFAM: CutC family; CutC family protein 2144050 10496135 Spico_1808 Sphaerochaeta coccoides DSM 17374 CutC family protein YP_004412388.1 2143301 R 760011 CDS YP_004412389.1 330837748 10496136 2144298..2147234 1 NC_015436.1 InterPro IPR002192; KEGG: ssm:Spirs_3995 response regulator receiver protein; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; SPTR: Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; IMG reference gene:2503958125; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate binding domain; pyruvate phosphate dikinase PEP/pyruvate-binding protein 2147234 10496136 Spico_1809 Sphaerochaeta coccoides DSM 17374 pyruvate phosphate dikinase PEP/pyruvate-binding protein YP_004412389.1 2144298 D 760011 CDS YP_004412390.1 330837749 10496137 complement(2147274..2148263) 1 NC_015436.1 COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307:IPR011418; KEGG: ssm:Spirs_0709 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase, TIM barrel domain; AP endonuclease, family 2, C-terminal; SPTR: uncharacterized protein; IMG reference gene:2503958126; PFAM: AP endonuclease 2 C terminus; Xylose isomerase-like TIM barrel; xylose isomerase domain-containing protein 2148263 10496137 Spico_1810 Sphaerochaeta coccoides DSM 17374 xylose isomerase domain-containing protein YP_004412390.1 2147274 R 760011 CDS YP_004412391.1 330837750 10496138 complement(2148277..2149371) 1 NC_015436.1 COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: ssm:Spirs_0708 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Oxidoreductase domain protein; IMG reference gene:2503958127; PFAM: Oxidoreductase, NAD-binding Rossmann fold; Oxidoreductase, C-terminal alpha/beta domain; oxidoreductase domain-containing protein 2149371 10496138 Spico_1811 Sphaerochaeta coccoides DSM 17374 oxidoreductase domain-containing protein YP_004412391.1 2148277 R 760011 CDS YP_004412392.1 330837751 10496139 complement(2149391..2150368) 1 NC_015436.1 COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: ssm:Spirs_0707 inner-membrane translocator; PFAM: ABC transporter permease; SPTR: Inner-membrane translocator; IMG reference gene:2503958128; PFAM: Branched-chain amino acid transport system / permease component; monosaccharide ABC transporter membrane protein, CUT2 family 2150368 10496139 Spico_1812 Sphaerochaeta coccoides DSM 17374 monosaccharide ABC transporter membrane protein, CUT2 family YP_004412392.1 2149391 R 760011 CDS YP_004412393.1 330837752 10496140 complement(2150365..2151867) 1 NC_015436.1 COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: ssm:Spirs_0706 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; IMG reference gene:2503958129; PFAM: ABC transporter; monosaccharide ABC transporter ATP-binding protein, CUT2 family 2151867 10496140 Spico_1813 Sphaerochaeta coccoides DSM 17374 monosaccharide ABC transporter ATP-binding protein, CUT2 family YP_004412393.1 2150365 R 760011 CDS YP_004412394.1 330837753 10496141 complement(2151935..2152936) 1 NC_015436.1 COGs: COG1879 ABC-type sugar transport system periplasmic component; KEGG: ssm:Spirs_0705 periplasmic binding protein/LacI transcriptional regulator; SPTR: Periplasmic binding protein/LacI transcriptional regulator; IMG reference gene:2503958130; periplasmic binding protein/LacI transcriptional regulator 2152936 10496141 Spico_1814 Sphaerochaeta coccoides DSM 17374 periplasmic binding protein/LacI transcriptional regulator YP_004412394.1 2151935 R 760011 CDS YP_004412395.1 330837754 10496142 2153184..2154239 1 NC_015436.1 COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: ssm:Spirs_0704 transcriptional regulator, LacI family; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI; SPTR: HTH-type transcriptional repressor cytR; IMG reference gene:2503958131; PFAM: Bacterial regulatory proteins, lacI family; family; LacI family transcriptional regulator 2154239 10496142 Spico_1815 Sphaerochaeta coccoides DSM 17374 LacI family transcriptional regulator YP_004412395.1 2153184 D 760011 CDS YP_004412396.1 330837755 10496143 complement(2155664..2156365) 1 NC_015436.1 COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: ssm:Spirs_4002 pseudouridine synthase; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Pseudouridine synthase; IMG reference gene:2503958132; PFAM: RNA pseudouridylate synthase; ribosomal large subunit pseudouridine synthase D 2156365 10496143 Spico_1816 Sphaerochaeta coccoides DSM 17374 ribosomal large subunit pseudouridine synthase D YP_004412396.1 2155664 R 760011 CDS YP_004412397.1 330837756 10496144 complement(2156362..2158365) 1 NC_015436.1 COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterPro IPR002205; KEGG: ssm:Spirs_4003 DNA topoisomerase (ATP-hydrolyzing); PFAM: DNA topoisomerase, type IIA, subunit A/C-terminal; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA topoisomerase, type IIA, subunit A/C-terminal; SPTR: Topoisomerase IV, A subunit, ; IMG reference gene:2503958133; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA topoisomerase IV subunit A 2158365 10496144 Spico_1817 Sphaerochaeta coccoides DSM 17374 DNA topoisomerase IV subunit A YP_004412397.1 2156362 R 760011 CDS YP_004412398.1 330837757 10496145 complement(2158365..2160185) 1 NC_015436.1 COGs: COG0187 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit; InterPro IPR003594:IPR013506:IPR001241; KEGG: ssm:Spirs_4004 DNA topoisomerase type IIA subunit B region 2 domain protein; PFAM: DNA topoisomerase, type IIA, subunit B, domain 2; ATPase-like, ATP-binding domain; SMART: DNA topoisomerase, type IIA, subunit B/N-terminal; ATPase-like, ATP-binding domain; SPTR: DNA topoisomerase 4 subunit B; IMG reference gene:2503958134; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; DNA topoisomerase IV subunit B 2160185 10496145 Spico_1818 Sphaerochaeta coccoides DSM 17374 DNA topoisomerase IV subunit B YP_004412398.1 2158365 R 760011 CDS YP_004412399.1 330837758 10496146 complement(2160264..2161187) 1 NC_015436.1 COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: fbl:Fbal_2937 MscS mechanosensitive ion channel; PFAM: Mechanosensitive ion channel MscS; SPTR: Small-conductance mechanosensitive channel; IMG reference gene:2503958135; PFAM: Mechanosensitive ion channel; mechanosensitive ion channel protein MscS 2161187 10496146 Spico_1819 Sphaerochaeta coccoides DSM 17374 mechanosensitive ion channel protein MscS YP_004412399.1 2160264 R 760011 CDS YP_004412400.1 330837759 10496147 complement(2161265..2163145) 1 NC_015436.1 COGs: COG0326 Molecular chaperone HSP90 family; HAMAP: Chaperone protein HtpG; InterPro IPR001404:IPR003594:IPR020576; KEGG: ssm:Spirs_0285 heat shock protein HSP90; PFAM: Heat shock protein Hsp90, C-terminal; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; SPTR: Chaperone protein htpG; IMG reference gene:2503958136; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein; chaperone protein htpG 2163145 10496147 Spico_1820 Sphaerochaeta coccoides DSM 17374 chaperone protein htpG YP_004412400.1 2161265 R 760011 CDS YP_004412401.1 330837760 10496148 2163172..2164440 1 NC_015436.1 COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: tle:Tlet_1118 ROK family protein; PFAM: ROK; SPTR: ROK family protein; IMG reference gene:2503958137; PFAM: ROK family; ROK family protein 2164440 10496148 Spico_1821 Sphaerochaeta coccoides DSM 17374 ROK family protein YP_004412401.1 2163172 D 760011 CDS YP_004412402.1 330837761 10496149 complement(2164587..2165135) 1 NC_015436.1 KEGG: sta:STHERM_c03850 GTP-binding protein; SPTR: GTP-binding protein; IMG reference gene:2503958138; GTP-binding protein 2165135 10496149 Spico_1822 Sphaerochaeta coccoides DSM 17374 GTP-binding protein YP_004412402.1 2164587 R 760011 CDS YP_004412403.1 330837762 10496150 complement(2165264..2167174) 1 NC_015436.1 COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR006268:IPR006218:IPR001086:IPR002912; KEGG: ssm:Spirs_0275 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; Prephenate dehydratase; Amino acid-binding ACT; PRIAM: 3-deoxy-7-phosphoheptulonate synthase., Prephenate dehydratase; SPTR: uncharacterized protein; TIGRFAM: Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2; IMG reference gene:2503958139; PFAM: Prephenate dehydratase; ACT domain; DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; phospho-2-dehydro-3-deoxyheptonate aldolase 2167174 10496150 Spico_1823 Sphaerochaeta coccoides DSM 17374 phospho-2-dehydro-3-deoxyheptonate aldolase YP_004412403.1 2165264 R 760011 CDS YP_004412404.1 330837763 10496151 2167306..2168019 1 NC_015436.1 COGs: COG0177 EndoIII-related endonuclease; InterPro IPR003265:IPR003651; KEGG: dol:Dole_2166 DNA-(apurinic or apyrimidinic site) lyase; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SMART: HhH-GPD domain; SPTR: DNA-(Apurinic or apyrimidinic site) lyase; IMG reference gene:2503958140; PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: endonuclease III; DNA-(apurinic or apyrimidinic site) lyase 2168019 10496151 Spico_1824 Sphaerochaeta coccoides DSM 17374 DNA-(apurinic or apyrimidinic site) lyase YP_004412404.1 2167306 D 760011 CDS YP_004412405.1 330837764 10496152 complement(2168116..2171016) 1 NC_015436.1 InterPro IPR011493; KEGG: avn:Avin_37890 filamentous hemagglutinin domain-containing protein; SPTR: Filamentous hemagglutinin domain-containing protein; IMG reference gene:2503958141; PFAM: The GLUG motif; hypothetical protein 2171016 10496152 Spico_1825 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412405.1 2168116 R 760011 CDS YP_004412406.1 330837765 10496153 complement(2171391..2171807) 1 NC_015436.1 KEGG: azl:AZL_026760 major facilitator transporter; SPTR: Major facilitator transporter; IMG reference gene:2503958142; major facilitator superfamily transporter 2171807 10496153 Spico_1826 Sphaerochaeta coccoides DSM 17374 major facilitator superfamily transporter YP_004412406.1 2171391 R 760011 CDS YP_004412407.1 330837766 10496154 complement(2171869..2172174) 1 NC_015436.1 COGs: COG3323 conserved hypothetical protein; KEGG: pag:PLES_12181 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503958143; hypothetical protein 2172174 10496154 Spico_1827 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412407.1 2171869 R 760011 CDS YP_004412408.1 330837767 10496155 2172228..2172800 1 NC_015436.1 COGs: COG0193 Peptidyl-tRNA hydrolase; HAMAP: Peptidyl-tRNA hydrolase; InterPro IPR001328; KEGG: ssm:Spirs_0270 peptidyl-tRNA hydrolase; PFAM: Peptidyl-tRNA hydrolase; PRIAM: Aminoacyl-tRNA hydrolase; SPTR: Peptidyl-tRNA hydrolase; TIGRFAM: Peptidyl-tRNA hydrolase; IMG reference gene:2503958144; PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; Peptidyl-tRNA hydrolase 2172800 10496155 Spico_1828 Sphaerochaeta coccoides DSM 17374 Peptidyl-tRNA hydrolase YP_004412408.1 2172228 D 760011 CDS YP_004412409.1 330837768 10496156 2172877..2176317 1 NC_015436.1 COGs: COG0366 Glycosidase; InterPro IPR006047:IPR006589; KEGG: ssm:Spirs_0266 alpha amylase catalytic region; PFAM: Glycosyl hydrolase, family 13, catalytic domain; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; SPTR: Alpha amylase catalytic region; IMG reference gene:2503958145; PFAM: Alpha amylase, catalytic domain; alpha amylase 2176317 10496156 Spico_1829 Sphaerochaeta coccoides DSM 17374 alpha amylase YP_004412409.1 2172877 D 760011 CDS YP_004412410.1 330837769 10496157 2176345..2177577 1 NC_015436.1 COGs: COG1301 Na+/H+-dicarboxylate symporter; KEGG: ssm:Spirs_0263 transporter, SPTR: Transporter, ; IMG reference gene:2503958146; PFAM: Sodium:dicarboxylate symporter family; hypothetical protein 2177577 10496157 Spico_1830 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412410.1 2176345 D 760011 CDS YP_004412411.1 330837770 10496158 2177578..2178381 1 NC_015436.1 KEGG: rci:RRC456 Na(+)/H(+) antiporter; SPTR: uncharacterized protein; IMG reference gene:2503958147; hypothetical protein 2178381 10496158 Spico_1831 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412411.1 2177578 D 760011 CDS YP_004412412.1 330837771 10496159 2178695..2180866 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; SPTR: Regulator of chromosome condensation, RCC1; IMG reference gene:2503958148; PFAM: Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 2180866 10496159 Spico_1832 Sphaerochaeta coccoides DSM 17374 chromosome condensation regulator RCC1 YP_004412412.1 2178695 D 760011 CDS YP_004412413.1 330837772 10496160 complement(2181035..2182804) 1 NC_015436.1 COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000587:IPR000994; KEGG: ssm:Spirs_0211 peptidase M24; PFAM: Peptidase M24, structural domain; Creatinase; SPTR: Peptidase, M24 family protein; IMG reference gene:2503958149; PFAM: Metallopeptidase M24; Creatinase/Prolidase N-terminal domain; peptidase M24 2182804 10496160 Spico_1833 Sphaerochaeta coccoides DSM 17374 peptidase M24 YP_004412413.1 2181035 R 760011 CDS YP_004412414.1 330837773 10496161 complement(2182785..2183798) 1 NC_015436.1 COGs: COG0682 Prolipoprotein diacylglyceryltransferase; HAMAP: Prolipoprotein diacylglyceryl transferase; InterPro IPR001640; KEGG: ssm:Spirs_0157 prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase; SPTR: Prolipoprotein diacylglyceryl transferase; TIGRFAM: Prolipoprotein diacylglyceryl transferase; manually curated; IMG reference gene:2503958150; PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 2183798 10496161 Spico_1834 Sphaerochaeta coccoides DSM 17374 prolipoprotein diacylglyceryl transferase YP_004412414.1 2182785 R 760011 CDS YP_004412415.1 330837774 10496162 2183934..2185373 1 NC_015436.1 COGs: COG0793 Periplasmic protease; InterPro IPR004447:IPR001478:IPR005151; KEGG: ssm:Spirs_0153 carboxyl-terminal protease; PFAM: Peptidase S41; PDZ/DHR/GLGF; SMART: Peptidase S41; PDZ/DHR/GLGF; SPTR: Carboxy-terminal-processing protease; TIGRFAM: Peptidase S41A, C-terminal peptidase; IMG reference gene:2503958151; PFAM: Peptidase S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); carboxyl-terminal protease 2185373 10496162 Spico_1835 Sphaerochaeta coccoides DSM 17374 carboxyl-terminal protease YP_004412415.1 2183934 D 760011 CDS YP_004412416.1 330837775 10496163 2185380..2186171 1 NC_015436.1 COGs: COG1385 conserved hypothetical protein; InterPro IPR006700; KEGG: ssm:Spirs_0151 protein of unknown function DUF558; PFAM: Ribosomal RNA small subunit methyltransferase E; SPTR: RNA methyltransferase; TIGRFAM: Ribosomal RNA small subunit methyltransferase E; IMG reference gene:2503958152; PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family; Ribosomal RNA small subunit methyltransferase E 2186171 10496163 Spico_1836 Sphaerochaeta coccoides DSM 17374 Ribosomal RNA small subunit methyltransferase E YP_004412416.1 2185380 D 760011 CDS YP_004412417.1 330837776 10496170 complement(2187040..2188236) 1 NC_015436.1 COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR010095:IPR001959; KEGG: xfm:Xfasm12_1563 transposase OrfB; PFAM: Transposase, probable, IS891/IS1136/IS1341; Transposase, IS605 OrfB, C-terminal; SPTR: Transposase OrfB; TIGRFAM: Transposase, IS605 OrfB, C-terminal; IMG reference gene:2503958159; PFAM: Helix-turn-helix domain; transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region; transposase, IS605 OrfB family 2188236 10496170 Spico_1837 Sphaerochaeta coccoides DSM 17374 transposase, IS605 OrfB family YP_004412417.1 2187040 R 760011 CDS YP_004412418.1 330837777 10496171 complement(2188230..2188853) 1 NC_015436.1 COGs: COG2452 site-specific integrase-resolvase; InterPro IPR000551:IPR006119; KEGG: xfm:Xfasm12_1564 hypothetical protein; PFAM: Resolvase, N-terminal; HTH transcriptional regulator, MerR; SMART: Resolvase, N-terminal; SPTR: uncharacterized protein; IMG reference gene:2503958160; PFAM: MerR family regulatory protein; Resolvase, N terminal domain; resolvase domain-containing protein 2188853 10496171 Spico_1838 Sphaerochaeta coccoides DSM 17374 resolvase domain-containing protein YP_004412418.1 2188230 R 760011 CDS YP_004412419.1 330837778 10496172 complement(2188899..2189468) 1 NC_015436.1 KEGG: har:HEAR2257 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503958161; hypothetical protein 2189468 10496172 Spico_1839 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412419.1 2188899 R 760011 CDS YP_004412420.1 330837779 10496173 2189726..2191597 1 NC_015436.1 COGs: COG2812 DNA polymerase III gamma/tau subunits; InterPro IPR012763:IPR003959:IPR003593; KEGG: ssm:Spirs_0088 DNA polymerase III, subunits gamma and tau; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; SPTR: uncharacterized protein; TIGRFAM: DNA polymerase III, subunit gamma/ tau; IMG reference gene:2503958162; PFAM: ATPase associated with various cellular activities (AAA); DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III, delta' subunit; DNA polymerase III, subunit gamma and tau; DNA polymerase III subunits gamma and tau 2191597 10496173 Spico_1840 Sphaerochaeta coccoides DSM 17374 DNA polymerase III subunits gamma and tau YP_004412420.1 2189726 D 760011 CDS YP_004412421.1 330837780 10496174 2191594..2192184 1 NC_015436.1 COGs: COG0353 Recombinational DNA repair protein (RecF pathway); HAMAP: RecR protein; InterPro IPR000093:IPR015967:IPR006171; KEGG: ssm:Spirs_0086 recombination protein RecR; PFAM: Toprim domain; Zinc finger C4-type, RecR; SMART: Toprim domain; SPTR: Recombination protein recR; TIGRFAM: RecR protein; IMG reference gene:2503958163; PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR; DNA replication and repair protein RecR 2192184 10496174 Spico_1841 Sphaerochaeta coccoides DSM 17374 DNA replication and repair protein RecR YP_004412421.1 2191594 D 760011 CDS YP_004412422.1 330837781 10496175 2192435..2193892 1 NC_015436.1 KEGG: coc:Coch_0352 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503958164; hypothetical protein 2193892 10496175 Spico_1842 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412422.1 2192435 D 760011 CDS YP_004412423.1 330837782 10496176 2193983..2194366 1 NC_015436.1 KEGG: pfh:PFHG_02927 conserved hypothetical protein; SPTR: Conserved Plasmodium protein; IMG reference gene:2503958165; hypothetical protein 2194366 10496176 Spico_1843 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412423.1 2193983 D 760011 CDS YP_004412424.1 330837783 10496177 complement(2194451..2195293) 1 NC_015436.1 COGs: COG3717 5-keto 4-deoxyuronate isomerase; HAMAP: 5-keto 4-deoxyuronate isomerase; InterPro IPR007045:IPR021120; KEGG: csh:Closa_3486 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; PFAM: KduI/IolB isomerase; PRIAM: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; SPTR: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; IMG reference gene:2503958166; PFAM: KduI/IolB family; 4-deoxy-L-threo-5-hexulose uronate isomerase 2195293 10496177 Spico_1844 Sphaerochaeta coccoides DSM 17374 4-deoxy-L-threo-5-hexulose uronate isomerase YP_004412424.1 2194451 R 760011 CDS YP_004412425.1 330837784 10496178 complement(2195312..2196115) 1 NC_015436.1 COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: snt:SPT_0369 gluconate 5-dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: Gluconate 5-dehydrogenase; SPTR: Gluconate 5-dehydrogenase (5-keto-D-gluconate 5-reductase); IMG reference gene:2503958167; PFAM: short chain dehydrogenase; gluconate 5-dehydrogenase 2196115 10496178 Spico_1845 Sphaerochaeta coccoides DSM 17374 gluconate 5-dehydrogenase YP_004412425.1 2195312 R 760011 CDS YP_004412426.1 330837785 10496179 complement(2196296..2197144) 1 NC_015436.1 COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterPro IPR001623; KEGG: dat:HRM2_24840 DjlA; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal; SPTR: DjlA; IMG reference gene:2503958168; PFAM: DnaJ domain; Tellurite resistance protein TerB; molecular chaperone DnaJ 2197144 10496179 Spico_1846 Sphaerochaeta coccoides DSM 17374 molecular chaperone DnaJ YP_004412426.1 2196296 R 760011 CDS YP_004412427.1 330837786 10496180 complement(2197189..2198622) 1 NC_015436.1 COGs: COG1626 Neutral trehalase; KEGG: ssm:Spirs_0085 hypothetical protein; SPTR: uncharacterized protein; IMG reference gene:2503958169; PFAM: Trehalase; hypothetical protein 2198622 10496180 Spico_1847 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412427.1 2197189 R 760011 CDS YP_004412428.1 330837787 10496181 complement(2198781..2199710) 1 NC_015436.1 COGs: COG1597 Sphingosine kinase; InterPro IPR001206:IPR005218; KEGG: ssm:Spirs_3801 diacylglycerol kinase catalytic region; PFAM: Diacylglycerol kinase, catalytic domain; SMART: Diacylglycerol kinase, catalytic domain; SPTR: Diacylglycerol kinase catalytic region; TIGRFAM: Diacylglycerol/lipid kinase; IMG reference gene:2503958170; PFAM: Diacylglycerol kinase catalytic domain; TIGRFAM: lipid kinase, YegS/Rv2252/BmrU family; hypothetical protein 2199710 10496181 Spico_1848 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412428.1 2198781 R 760011 CDS YP_004412429.1 330837788 10496182 2199813..2201246 1 NC_015436.1 COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: ssm:Spirs_0042 MATE efflux family protein; PFAM: Multi antimicrobial extrusion protein; SPTR: MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein; IMG reference gene:2503958171; PFAM: MatE; TIGRFAM: efflux protein, MATE family; MATE efflux family protein 2201246 10496182 Spico_1849 Sphaerochaeta coccoides DSM 17374 MATE efflux family protein YP_004412429.1 2199813 D 760011 CDS YP_004412430.1 330837789 10496183 2201307..2202482 1 NC_015436.1 COGs: COG1820 N-acetylglucosamine-6-phosphate deacetylase; InterPro IPR006680:IPR003764; KEGG: ssm:Spirs_1362 N-acetylglucosamine-6-phosphate deacetylase; PFAM: Amidohydrolase 1; PRIAM: N-acetylglucosamine-6-phosphate deacetylase; SPTR: N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; IMG reference gene:2503958172; PFAM: Amidohydrolase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; N-acetylglucosamine-6-phosphate deacetylase 2202482 10496183 Spico_1850 Sphaerochaeta coccoides DSM 17374 N-acetylglucosamine-6-phosphate deacetylase YP_004412430.1 2201307 D 760011 CDS YP_004412431.1 330837790 10496184 2202547..2204034 1 NC_015436.1 COGs: COG2195 Di- and tripeptidase; InterPro IPR002933:IPR011650:IPR001160; KEGG: ssm:Spirs_0034 aminoacyl-histidine dipeptidase; PFAM: Peptidase M20, dimerisation; Peptidase M20; PRIAM: Xaa-His dipeptidase; SPTR: Aminoacyl-histidine dipeptidase; TIGRFAM: Peptidase M20C, Xaa-His dipeptidase; IMG reference gene:2503958173; PFAM: Peptidase M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: aminoacyl-histidine dipeptidase; aminoacyl-histidine dipeptidase 2204034 10496184 Spico_1851 Sphaerochaeta coccoides DSM 17374 aminoacyl-histidine dipeptidase YP_004412431.1 2202547 D 760011 CDS YP_004412432.1 330837791 10496185 2204385..2206565 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; SPTR: uncharacterized protein; IMG reference gene:2503958174; PFAM: Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 2206565 10496185 Spico_1852 Sphaerochaeta coccoides DSM 17374 chromosome condensation regulator RCC1 YP_004412432.1 2204385 D 760011 CDS YP_004412433.1 330837792 10496186 2206750..2207970 1 NC_015436.1 COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: ssm:Spirs_0330 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: uncharacterized protein; IMG reference gene:2503958175; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; phospholipid/glycerol acyltransferase 2207970 10496186 Spico_1853 Sphaerochaeta coccoides DSM 17374 phospholipid/glycerol acyltransferase YP_004412433.1 2206750 D 760011 CDS YP_004412434.1 330837793 10496187 2207970..2209406 1 NC_015436.1 COGs: COG0786 Na+/glutamate symporter; KEGG: ssm:Spirs_2474 Na+/glutamate symporter-like protein; SPTR: Na+/glutamate symporter-like protein; IMG reference gene:2503958176; Na+/glutamate symporter-like protein 2209406 10496187 Spico_1854 Sphaerochaeta coccoides DSM 17374 Na+/glutamate symporter-like protein YP_004412434.1 2207970 D 760011 CDS YP_004412435.1 330837794 10496188 2209771..2212146 1 NC_015436.1 COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR013378:IPR011110:IPR000408; KEGG: aeh:Mlg_2687 regulator of chromosome condensation, RCC1; PFAM: Regulator of chromosome condensation, RCC1; Listeria/Bacterioides repeat; Two component regulator propeller; SPTR: uncharacterized protein; IMG reference gene:2503958177; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Regulator of chromosome condensation (RCC1) repeat; chromosome condensation regulator RCC1 2212146 10496188 Spico_1855 Sphaerochaeta coccoides DSM 17374 chromosome condensation regulator RCC1 YP_004412435.1 2209771 D 760011 CDS YP_004412436.1 330837795 10496189 complement(2212314..2213534) 1 NC_015436.1 COGs: COG0426 flavoprotein; InterPro IPR001279:IPR008254; KEGG: ssm:Spirs_0020 uncharacterized flavoprotein; PFAM: Beta-lactamase-like; Flavodoxin/nitric oxide synthase; SMART: Beta-lactamase-like; SPTR: Beta-lactamase-like; IMG reference gene:2503958178; PFAM: Metallo-beta-lactamase superfamily; Flavodoxin; beta-lactamase domain-containing protein 2213534 10496189 Spico_1856 Sphaerochaeta coccoides DSM 17374 beta-lactamase domain-containing protein YP_004412436.1 2212314 R 760011 CDS YP_004412437.1 330837796 10496190 complement(2213791..2214546) 1 NC_015436.1 COGs: COG1451 metal-dependent hydrolase; InterPro IPR002725; KEGG: abo:ABO_2745 hypothetical protein; PFAM: Protein of unknown function DUF45; SPTR: uncharacterized protein; IMG reference gene:2503958179; PFAM: Protein of unknown function DUF45; hypothetical protein 2214546 10496190 Spico_1857 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412437.1 2213791 R 760011 CDS YP_004412438.1 330837797 10496191 complement(2214549..2215535) 1 NC_015436.1 COGs: COG2431 membrane protein; InterPro IPR005642; KEGG: ssm:Spirs_0011 protein of unknown function DUF340 membrane; PFAM: Protein of unknown function DUF340, prokaryotic membrane; SPTR: surface protein; IMG reference gene:2503958180; PFAM: Membrane protein of unknown function (DUF340); hypothetical protein 2215535 10496191 Spico_1858 Sphaerochaeta coccoides DSM 17374 hypothetical protein YP_004412438.1 2214549 R 760011 CDS YP_004412439.1 330837798 10496192 2215596..2216834 1 NC_015436.1 COGs: COG1916 Uncharacterized homolog of PrgY (pheromone shutdown protein); InterPro IPR002816:IPR005230; KEGG: ssm:Spirs_4297 TraB family protein; PFAM: Pheromone shutdown-related, TraB; SPTR: TraB family protein; TIGRFAM: Pheromone shutdown, TraB; IMG reference gene:2503958181; PFAM: TraB family; TIGRFAM: pheromone shutdown-related protein TraB; TraB family protein 2216834 10496192 Spico_1859 Sphaerochaeta coccoides DSM 17374 TraB family protein YP_004412439.1 2215596 D 760011 CDS YP_004412440.1 330837799 10496193 complement(2216848..2218212) 1 NC_015436.1 COGs: COG1066 ATP-dependent serine protease; InterPro IPR004504:IPR003593; KEGG: ssm:Spirs_4298 DNA repair protein RadA; SMART: ATPase, AAA+ type, core; SPTR: DNA repair protein radA; TIGRFAM: DNA repair protein RadA; IMG reference gene:2503958182; PFAM: KaiC; TIGRFAM: DNA repair protein RadA; DNA repair protein RadA 2218212 10496193 Spico_1860 Sphaerochaeta coccoides DSM 17374 DNA repair protein RadA YP_004412440.1 2216848 R 760011 CDS YP_004412441.1 330837800 10496194 complement(2218235..2219182) 1 NC_015436.1 COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; InterPro IPR002130:IPR001179; KEGG: dps:DP1645 peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; Peptidyl-prolyl cis-trans isomerase, FKBP-type; PRIAM: Peptidylprolyl isomerase; SPTR: Probable peptidyl-prolyl cis-trans isomerase; IMG reference gene:2503958183; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; Peptidylprolyl isomerase 2219182 10496194 Spico_1861 Sphaerochaeta coccoides DSM 17374 Peptidylprolyl isomerase YP_004412441.1 2218235 R 760011 CDS YP_004412442.1 330837801 10496195 complement(2219257..2220216) 1 NC_015436.1 COGs: COG1475 transcriptional regulator protein; InterPro IPR003115:IPR004437; KEGG: ssm:Spirs_4300 ParB-like partition protein; PFAM: ParB-like nuclease; SMART: ParB-like nuclease; SPTR: ParB family protein; TIGRFAM: ParB-like partition protein; IMG reference gene:2503958184; PFAM: ParB-like nuclease domain; KorB domain; TIGRFAM: ParB-like partition proteins; parB-like partition protein 2220216 10496195 Spico_1862 Sphaerochaeta coccoides DSM 17374 parB-like partition protein YP_004412442.1 2219257 R 760011 CDS YP_004412443.1 330837802 10496196 complement(2220203..2220967) 1 NC_015436.1 COGs: COG1192 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: ssm:Spirs_4301 cobyrinic acid ac-diamide synthase; PFAM: Cobyrinic acid a,c-diamide synthase; SPTR: uncharacterized protein; IMG reference gene:2503958185; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; chromosome segregation ATPase 2220967 10496196 Spico_1863 Sphaerochaeta coccoides DSM 17374 chromosome segregation ATPase YP_004412443.1 2220203 R 760011 CDS YP_004412444.1 330837803 10496197 2221165..2221401 1 NC_015436.1 COGs: COG0694 Thioredoxin-like protein and domains; InterPro IPR001075; KEGG: ssm:Spirs_4302 nitrogen-fixing NifU domain protein; PFAM: NIF system FeS cluster assembly, NifU, C-terminal; SPTR: Nitrogen-fixing NifU domain protein; IMG reference gene:2503958186; PFAM: NifU-like domain; nitrogen-fixing NifU domain-containing protein 2221401 10496197 Spico_1864 Sphaerochaeta coccoides DSM 17374 nitrogen-fixing NifU domain-containing protein YP_004412444.1 2221165 D 760011 CDS YP_004412445.1 330837804 10496198 complement(2222631..2225156) 1 NC_015436.1 COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterPro IPR002205:IPR006691:IPR005743; KEGG: ssm:Spirs_4305 DNA gyrase, A subunit; PFAM: DNA topoisomerase, type IIA, subunit A/C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA topoisomerase, type IIA, subunit A/C-terminal; SPTR: DNA gyrase, A subunit; TIGRFAM: DNA gyrase, subunit A; IMG reference gene:2503958187; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit; DNA gyrase subunit A 2225156 10496198 Spico_1865 Sphaerochaeta coccoides DSM 17374 DNA gyrase subunit A YP_004412445.1 2222631 R 760011 CDS YP_004412446.1 330837805 10496199 complement(2225153..2227135) 1 NC_015436.1 COGs: COG0187 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit; InterProIPR003594:IPR013506:IPR006171:IPR002288:IPR 011557:IPR001241; KEGG: ssm:Spirs_4306 DNA gyrase, B subunit; PFAM: DNA topoisomerase, type IIA, subunit B, domain 2; ATPase-like, ATP-binding domain; Toprim domain; DNA topoisomerase, type IIA, subunit B, C-terminal; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA topoisomerase, type IIA, subunit B/N-terminal; ATPase-like, ATP-binding domain; SPTR: DNA gyrase subunit B; TIGRFAM: DNA gyrase, subunit B; IMG reference gene:2503958188; PFAM: Toprim domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit; DNA gyrase subunit B 2227135 10496199 Spico_1866 Sphaerochaeta coccoides DSM 17374 DNA gyrase subunit B YP_004412446.1 2225153 R 760011 CDS