-- dump date   	20140620_072153
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_005473818.1	PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA; manually curated
YP_005473819.1	PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit
YP_005473820.1	PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein
YP_005473821.1	PFAM: Protein of unknown function (DUF721)
YP_005473822.1	PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type
YP_005473823.1	PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial
YP_005473824.1	PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain; membrane protein insertase, YidC/Oxa1 family, N-terminal domain
YP_005473825.1	PFAM: R3H domain
YP_005473826.1	PFAM: Glycine cleavage H-protein; TIGRFAM: glycine cleavage system H protein
YP_005473827.1	PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase
YP_005473828.1	PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain; TIGRFAM: S-adenosylmethionine synthetase
YP_005473829.1	PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005473831.1	PFAM: Glycosyl transferases group 1
YP_005473832.1	PFAM: Transposase, Mutator family
YP_005473837.1	PFAM: CotH protein
YP_005473841.1	PFAM: CotH protein
YP_005473842.1	PFAM: CotH protein
YP_005473844.1	PFAM: Glycosyl transferase family 2
YP_005473846.1	PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase
YP_005473847.1	PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase, short form
YP_005473848.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family
YP_005473850.1	PFAM: Polysaccharide biosynthesis protein
YP_005473851.1	PFAM: Glycosyl transferase family 2
YP_005473853.1	PFAM: Glycosyl transferase family 2
YP_005473854.1	PFAM: Glycosyl transferase family 2
YP_005473855.1	PFAM: Glycosyl transferases group 1
YP_005473857.1	PFAM: Fic/DOC family
YP_005473858.1	PFAM: Nucleotidyltransferase substrate binding protein like; TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family
YP_005473859.1	PFAM: Nucleotidyltransferase domain
YP_005473861.1	PFAM: PIN domain; manually curated
YP_005473864.1	PFAM: Glycosyl transferase family 2
YP_005473865.1	PFAM: Glycosyl transferases group 1
YP_005473868.1	PFAM: Glycosyl transferase family 2
YP_005473871.1	PFAM: ABC transporter transmembrane region; ABC transporter
YP_005473875.1	PFAM: Glycosyl transferases group 1
YP_005473876.1	PFAM: Glycosyl transferases group 1
YP_005473877.1	PFAM: NAD dependent epimerase/dehydratase family
YP_005473880.1	PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase
YP_005473881.1	PFAM: Predicted permease
YP_005473882.1	PFAM: Predicted permease
YP_005473883.1	PFAM: Glycosyl transferase family 4
YP_005473888.1	PFAM: SdiA-regulated
YP_005473890.1	PFAM: CotH protein
YP_005473892.1	PFAM: Inorganic H+ pyrophosphatase; TIGRFAM: vacuolar-type H(+)-translocating pyrophosphatase
YP_005473896.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_005473897.1	PFAM: Polyprenyl synthetase
YP_005473898.1	PFAM: FtsJ-like methyltransferase; TIGRFAM: cell division protein FtsJ
YP_005473899.1	PFAM: Rhomboid family
YP_005473901.1	PFAM: AMP-binding enzyme
YP_005473902.1	PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase
YP_005473903.1	PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
YP_005473904.1	PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase II
YP_005473905.1	TIGRFAM: phosphoribosylformylglycinamidine synthase I
YP_005473906.1	PFAM: Uncharacterised ACR, COG1259; UvrB/uvrC motif
YP_005473908.1	PFAM: Glycosyl transferases group 1
YP_005473909.1	PFAM: Glycosyl transferases group 1
YP_005473911.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005473912.1	TIGRFAM: RND family efflux transporter, MFP subunit
YP_005473913.1	PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
YP_005473915.1	PFAM: Outer membrane efflux protein
YP_005473916.1	PFAM: Alpha amylase, catalytic domain
YP_005473917.1	PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase
YP_005473918.1	PFAM: Phospholipase/Carboxylesterase
YP_005473920.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005473922.1	PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005473923.1	PFAM: Stage II sporulation protein E (SpoIIE)
YP_005473925.1	PFAM: RmlD substrate binding domain
YP_005473926.1	PFAM: Alpha amylase, catalytic domain
YP_005473927.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005473928.1	PFAM: short chain dehydrogenase
YP_005473931.1	PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005473932.1	PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; BadF/BadG/BcrA/BcrD ATPase family; CoA enzyme activase uncharacterised domain (DUF2229); TIGRFAM: CoA-substrate-specific enzyme activase, putative
YP_005473933.1	PFAM: Protein of unknown function DUF45
YP_005473934.1	PFAM: Putative esterase
YP_005473935.1	PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box
YP_005473936.1	PFAM: Alpha amylase, catalytic domain
YP_005473937.1	PFAM: Bacterial extracellular solute-binding protein
YP_005473938.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005473939.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005473940.1	PFAM: L-arabinose isomerase; L-fucose isomerase, C-terminal domain
YP_005473941.1	PFAM: ROK family
YP_005473942.1	PFAM: Transketolase, thiamine diphosphate binding domain
YP_005473943.1	PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain
YP_005473944.1	PFAM: Ribose/Galactose Isomerase; TIGRFAM: sugar-phosphate isomerases, RpiB/LacA/LacB family
YP_005473945.1	PFAM: Aldehyde dehydrogenase family
YP_005473946.1	PFAM: CoA-ligase; ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase, beta subunit
YP_005473947.1	PFAM: CoA binding domain; CoA-ligase; TIGRFAM: succinyl-CoA synthetase, alpha subunit
YP_005473948.1	PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter
YP_005473949.1	PFAM: Sulfite exporter TauE/SafE
YP_005473951.1	PFAM: Glycosyl hydrolases family 31
YP_005473953.1	PFAM: NADPH-dependent FMN reductase; TIGRFAM: NAD(P)H:quinone oxidoreductase, type IV
YP_005473956.1	PFAM: HAMP domain; Protein of unknown function (DUF3365); Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005473957.1	PFAM: Cytochrome C assembly protein
YP_005473958.1	PFAM: ResB-like family
YP_005473959.1	PFAM: Predicted aminopeptidase (DUF2265)
YP_005473961.1	PFAM: Bacterial regulatory proteins, luxR family
YP_005473962.1	PFAM: Cache domain; HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005473964.1	PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain
YP_005473965.1	PFAM: Omptin family
YP_005473966.1	PFAM: Bacterial membrane flanked domain
YP_005473967.1	PFAM: Bacterial membrane flanked domain
YP_005473968.1	PFAM: Calcineurin-like phosphoesterase
YP_005473971.1	PFAM: Alpha amylase, catalytic domain
YP_005473972.1	PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold
YP_005473973.1	PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005473974.1	PFAM: Bacterial DNA-binding protein
YP_005473975.1	PFAM: Major Facilitator Superfamily
YP_005473976.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB
YP_005473978.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_005473982.1	PFAM: PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; TIGRFAM: pyruvate, phosphate dikinase
YP_005473983.1	PFAM: DnaJ domain
YP_005473987.1	PFAM: Predicted permease
YP_005473988.1	PFAM: Predicted permease
YP_005473989.1	PFAM: ABC transporter
YP_005473990.1	PFAM: SPFH domain / Band 7 family
YP_005473991.1	PFAM: Bacterial regulatory proteins, gntR family
YP_005473993.1	PFAM: Aldehyde dehydrogenase family
YP_005473994.1	PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain
YP_005473995.1	PFAM: Aminotransferase class-III; TIGRFAM: 2,4-diaminobutyrate 4-transaminases; diaminobutyrate--2-oxoglutarate aminotransferase
YP_005473996.1	PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase
YP_005473997.1	PFAM: Radical SAM superfamily; B12 binding domain
YP_005474002.1	PFAM: ABC transporter
YP_005474003.1	PFAM: Predicted permease
YP_005474004.1	PFAM: Predicted permease
YP_005474005.1	PFAM: Adenylate and Guanylate cyclase catalytic domain
YP_005474006.1	PFAM: Phosphoglucose isomerase
YP_005474007.1	PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase
YP_005474008.1	PFAM: Aminotransferase class-III
YP_005474009.1	PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase
YP_005474010.1	PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form
YP_005474011.1	PFAM: Arginine repressor, C-terminal domain; Arginine repressor, DNA binding domain; TIGRFAM: arginine repressor
YP_005474012.1	PFAM: Protein of unknown function (DUF342)
YP_005474013.1	PFAM: Glucose-6-phosphate dehydrogenase subunit
YP_005474014.1	PFAM: Glucose-6-phosphate dehydrogenase, C-terminal domain; Glucose-6-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glucose-6-phosphate 1-dehydrogenase
YP_005474015.1	PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL
YP_005474017.1	PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit
YP_005474018.1	PFAM: Protein export membrane protein; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family
YP_005474019.1	PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF
YP_005474020.1	PFAM: Amino acid permease
YP_005474022.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005474023.1	PFAM: Adenylate and Guanylate cyclase catalytic domain; CHASE2 domain
YP_005474025.1	PFAM: FecR protein
YP_005474027.1	PFAM: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
YP_005474028.1	PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: serine O-acetyltransferase
YP_005474030.1	PFAM: NUDIX domain
YP_005474031.1	PFAM: CheB methylesterase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; CheR methyltransferase, SAM binding domain; His Kinase A (phosphoacceptor) domain; CheR methyltransferase, all-alpha domain; PAS fold; TIGRFAM: PAS domain S-box
YP_005474032.1	PFAM: Response regulator receiver domain
YP_005474033.1	PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain
YP_005474034.1	PFAM: PilZ domain
YP_005474036.1	manually curated
YP_005474037.1	PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family
YP_005474038.1	PFAM: Anti-sigma-28 factor, FlgM
YP_005474039.1	PFAM: Iron-containing alcohol dehydrogenase
YP_005474040.1	PFAM: SpoU rRNA Methylase family
YP_005474041.1	PFAM: OsmC-like protein
YP_005474042.1	PFAM: HDOD domain; TIGRFAM: uncharacterized domain HDIG
YP_005474043.1	PFAM: Lon protease (S16) C-terminal proteolytic domain
YP_005474044.1	PFAM: Bacterial regulatory proteins, luxR family
YP_005474045.1	PFAM: Response regulator receiver domain
YP_005474046.1	PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family
YP_005474047.1	PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase
YP_005474052.1	PFAM: UvrD/REP helicase
YP_005474053.1	PFAM: EamA-like transporter family
YP_005474054.1	PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; His Kinase A (phosphoacceptor) domain; Hpt domain; PAS fold; TIGRFAM: PAS domain S-box
YP_005474055.1	PFAM: Ferritin-like domain
YP_005474057.1	PFAM: Inositol monophosphatase family
YP_005474058.1	PFAM: D-arabinono-1,4-lactone oxidase; FAD binding domain
YP_005474059.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
YP_005474061.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III
YP_005474062.1	PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase
YP_005474063.1	PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase
YP_005474064.1	PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II
YP_005474065.1	PFAM: Patatin-like phospholipase; Surface antigen
YP_005474067.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain
YP_005474068.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005474069.1	PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005474070.1	PFAM: Peptidase family M48
YP_005474071.1	PFAM: YeeE/YedE family (DUF395)
YP_005474072.1	PFAM: YeeE/YedE family (DUF395)
YP_005474074.1	PFAM: Glycosyl transferase family 2
YP_005474075.1	PFAM: Nucleotidyl transferase
YP_005474078.1	PFAM: 2',5' RNA ligase family; TIGRFAM: 2'-5' RNA ligase
YP_005474079.1	PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); TIGRFAM: Listeria/Bacterioides repeat
YP_005474080.1	PFAM: Protein of unknown function (DUF964)
YP_005474081.1	PFAM: Protein of unknown function (DUF964)
YP_005474083.1	PFAM: Universal stress protein family
YP_005474084.1	PFAM: PhoU domain; Na+/Pi-cotransporter; TIGRFAM: Na/Pi-cotransporter
YP_005474086.1	PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005474087.1	PFAM: Response regulator receiver domain
YP_005474088.1	PFAM: family; TIGRFAM: D-xylose ABC transporter, substrate-binding protein
YP_005474089.1	PFAM: family; TIGRFAM: D-xylose ABC transporter, substrate-binding protein
YP_005474090.1	PFAM: ABC transporter
YP_005474091.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005474092.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005474093.1	PFAM: Malate/L-lactate dehydrogenase
YP_005474094.1	PFAM: Melibiase
YP_005474095.1	PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_005474096.1	PFAM: TrkA-N domain; Ion channel; TrkA-C domain
YP_005474097.1	PFAM: Acetyltransferase (GNAT) family
YP_005474099.1	PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain; manually curated
YP_005474100.1	PFAM: ATPase family associated with various cellular activities (AAA)
YP_005474101.1	PFAM: Protein of unknown function DUF58
YP_005474103.1	PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain
YP_005474104.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005474105.1	PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005474107.1	PFAM: ABC transporter substrate binding protein
YP_005474108.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005474109.1	PFAM: ABC transporter
YP_005474110.1	PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: 6-phosphogluconolactonase
YP_005474112.1	PFAM: Alpha amylase, catalytic domain
YP_005474113.1	PFAM: Patatin-like phospholipase
YP_005474114.1	PFAM: Cyclic nucleotide-binding domain
YP_005474115.1	PFAM: Adenylate and Guanylate cyclase catalytic domain
YP_005474117.1	PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase
YP_005474118.1	PFAM: Alpha amylase, catalytic domain; TIGRFAM: malto-oligosyltrehalose synthase
YP_005474119.1	PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; Domain of unknown function (DUF3459); TIGRFAM: malto-oligosyltrehalose trehalohydrolase
YP_005474120.1	PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005474121.1	PFAM: GlnD PII-uridylyltransferase; Glutamate-ammonia ligase adenylyltransferase
YP_005474122.1	PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I
YP_005474124.1	PFAM: Fimbrial Usher protein
YP_005474125.1	PFAM: Gram-negative pili assembly chaperone, N-terminal domain; manually curated
YP_005474128.1	PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein YidD
YP_005474129.1	PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: Xaa-His dipeptidase
YP_005474130.1	PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
YP_005474131.1	PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005474133.1	PFAM: Radical SAM superfamily
YP_005474134.1	PFAM: Memo-like protein
YP_005474135.1	PFAM: AMMECR1; TIGRFAM: uncharacterized protein, PH0010 family
YP_005474136.1	PFAM: Protein of unknown function (DUF1667)
YP_005474137.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_005474138.1	PFAM: BFD-like [2Fe-2S] binding domain; FAD dependent oxidoreductase
YP_005474139.1	PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase
YP_005474141.1	TIGRFAM: YD repeat (two copies)
YP_005474142.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005474143.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005474146.1	PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
YP_005474147.1	PFAM: Oligopeptidase F; Peptidase family M3; TIGRFAM: oligoendopeptidase, pepF/M3 family
YP_005474148.1	PFAM: Nucleoside diphosphate kinase; manually curated
YP_005474149.1	PFAM: Nucleoside H+ symporter; manually curated
YP_005474150.1	PFAM: Protein of unknown function (DUF1312)
YP_005474151.1	PFAM: Sodium:solute symporter family
YP_005474153.1	PFAM: PP-loop family; manually curated
YP_005474154.1	PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005474156.1	PFAM: ABC transporter
YP_005474157.1	PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family
YP_005474158.1	PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family
YP_005474160.1	PFAM: Shikimate kinase
YP_005474161.1	PFAM: HhH-GPD superfamily base excision DNA repair protein
YP_005474162.1	PFAM: HD domain
YP_005474163.1	PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; potassium and/or sodium efflux P-type ATPase, fungal-type
YP_005474164.1	PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: apurinic endonuclease (APN1)
YP_005474165.1	PFAM: ArsC family
YP_005474166.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005474167.1	PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF
YP_005474168.1	PFAM: MatE; TIGRFAM: putative efflux protein, MATE family
YP_005474169.1	PFAM: Glycosyl hydrolase family 1
YP_005474171.1	PFAM: Tetratricopeptide repeat; Region found in RelA / SpoT proteins
YP_005474172.1	PFAM: Beta-eliminating lyase
YP_005474173.1	PFAM: Hpt domain
YP_005474174.1	PFAM: Y_Y_Y domain; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Two component regulator propeller; His Kinase A (phosphoacceptor) domain; Hpt domain
YP_005474175.1	PFAM: Ferredoxin thioredoxin reductase catalytic beta chain
YP_005474176.1	PFAM: Glutaredoxin
YP_005474178.1	PFAM: Formate--tetrahydrofolate ligase
YP_005474179.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_005474180.1	PFAM: short chain dehydrogenase
YP_005474184.1	PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: mevalonate kinase
YP_005474185.1	PFAM: GHMP kinases N terminal domain
YP_005474186.1	PFAM: GHMP kinases N terminal domain; TIGRFAM: diphosphomevalonate decarboxylase
YP_005474187.1	PFAM: Hydroxymethylglutaryl-coenzyme A reductase; TIGRFAM: hydroxymethylglutaryl-CoA reductase, degradative
YP_005474188.1	PFAM: FMN-dependent dehydrogenase; TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 2
YP_005474189.1	PFAM: Hydroxymethylglutaryl-coenzyme A synthase N terminal; Hydroxymethylglutaryl-coenzyme A synthase C terminal; TIGRFAM: 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade
YP_005474190.1	PFAM: Cyclic nucleotide-binding domain
YP_005474192.1	PFAM: Predicted permease
YP_005474194.1	PFAM: PilZ domain
YP_005474195.1	PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family
YP_005474198.1	PFAM: TfoX N-terminal domain
YP_005474199.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_005474200.1	PFAM: NADPH-dependent FMN reductase
YP_005474201.1	PFAM: Phosphotransferase enzyme family
YP_005474202.1	PFAM: Domain of unknown function (DUF1707)
YP_005474204.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005474205.1	PFAM: FMN-binding domain
YP_005474208.1	PFAM: 3-demethylubiquinone-9 3-methyltransferase
YP_005474209.1	PFAM: Protein of unknown function (DUF820); Phd_YefM; TIGRFAM: prevent-host-death family protein
YP_005474213.1	PFAM: Bacterial regulatory protein, arsR family
YP_005474214.1	PFAM: HTH domain
YP_005474215.1	PFAM: CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated endonuclease Cas1, subtype I-F/YPEST; CRISPR-associated endonuclease Cas1
YP_005474216.1	TIGRFAM: CRISPR-associated helicase Cas3, subtype I-F/YPEST
YP_005474217.1	PFAM: CRISPR-associated protein (Cas_Csy1); TIGRFAM: CRISPR type I-F/YPEST-associated protein Csy1
YP_005474218.1	PFAM: CRISPR-associated protein (Cas_Csy2); TIGRFAM: CRISPR type I-F/YPEST-associated protein Csy2
YP_005474219.1	PFAM: CRISPR-associated protein (Cas_Csy3); TIGRFAM: CRISPR type I-F/YPEST-associated protein Csy3
YP_005474220.1	PFAM: CRISPR-associated protein (Cas_Csy4); TIGRFAM: CRISPR-associated protein Cas6/Csy4, subtype I-F/YPEST
YP_005474221.1	PFAM: Domain of unknown function (DU1801)
YP_005474222.1	PFAM: Aminotransferase class I and II
YP_005474223.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005474224.1	PFAM: ABC transporter
YP_005474225.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005474226.1	PFAM: family
YP_005474227.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase
YP_005474228.1	PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain
YP_005474229.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005474231.1	PFAM: GTP cyclohydrolase I; TIGRFAM: 7-cyano-7-deazaguanine reductase
YP_005474232.1	PFAM: Uncharacterized ACR, YhhQ family COG1738; TIGRFAM: conserved hypothetical integral membrane protein
YP_005474233.1	PFAM: MgtE intracellular N domain; CBS domain; Divalent cation transporter; TIGRFAM: Mg2+ transporter (mgtE)
YP_005474234.1	PFAM: MgtC family
YP_005474235.1	PFAM: ABC transporter
YP_005474238.1	PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005474239.1	PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_005474240.1	PFAM: Putative tRNA binding domain; TIGRFAM: export-related chaperone CsaA
YP_005474243.1	PFAM: CAAX amino terminal protease family
YP_005474246.1	PFAM: PIN domain
YP_005474248.1	PFAM: Nucleotidyltransferase domain
YP_005474249.1	PFAM: PIN domain
YP_005474251.1	PFAM: tRNA methyl transferase
YP_005474252.1	PFAM: PIN domain
YP_005474253.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2191)
YP_005474254.1	PFAM: Homoserine O-succinyltransferase; TIGRFAM: homoserine O-succinyltransferase
YP_005474255.1	PFAM: Dihydrouridine synthase (Dus); TIGRFAM: tRNA dihydrouridine synthase A
YP_005474256.1	PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005474257.1	PFAM: Phosphate transporter family
YP_005474258.1	PFAM: OmpA family
YP_005474259.1	PFAM: alpha/beta hydrolase fold
YP_005474260.1	PFAM: MG2 domain; Alpha-2-macroglobulin family; Alpha-2-macroglobulin family N-terminal region; Alpha-2-macroglobulin MG1 domain
YP_005474261.1	PFAM: Penicillin-Binding Protein C-terminus Family; Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein 1C
YP_005474262.1	PFAM: Major Facilitator Superfamily
YP_005474263.1	PFAM: 7TM diverse intracellular signalling; Stage II sporulation protein E (SpoIIE)
YP_005474265.1	PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; Sporulation related domain; TIGRFAM: rare lipoprotein A
YP_005474266.1	PFAM: tRNA synthetases class I (K); TIGRFAM: lysyl-tRNA synthetase, archaeal and spirochete
YP_005474267.1	PFAM: Ribose 5-phosphate isomerase A (phosphoriboisomerase A); TIGRFAM: ribose 5-phosphate isomerase
YP_005474268.1	PFAM: KH domain; GTPase of unknown function; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain
YP_005474269.1	PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP
YP_005474270.1	PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase
YP_005474271.1	PFAM: Endonuclease/Exonuclease/phosphatase family
YP_005474272.1	PFAM: Uracil DNA glycosylase superfamily
YP_005474273.1	PFAM: RmuC family
YP_005474275.1	PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family; manually curated
YP_005474276.1	PFAM: Aldose 1-epimerase
YP_005474277.1	PFAM: Hsp20/alpha crystallin family
YP_005474278.1	PFAM: Hsp20/alpha crystallin family
YP_005474279.1	PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); TIGRFAM: Listeria/Bacterioides repeat
YP_005474280.1	PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt)
YP_005474281.1	PFAM: Adenylate and Guanylate cyclase catalytic domain; HAMP domain
YP_005474282.1	PFAM: FecR protein
YP_005474284.1	PFAM: DOMON domain
YP_005474285.1	PFAM: Alpha amylase, catalytic domain; Domain of unknown function (DUF1939)
YP_005474286.1	PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain
YP_005474287.1	PFAM: ATP-grasp domain
YP_005474288.1	PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein
YP_005474289.1	PFAM: Acetyltransferase (GNAT) family
YP_005474290.1	PFAM: Protein of unknown function (DUF541)
YP_005474291.1	PFAM: Glycine cleavage T-protein C-terminal barrel domain; Aminomethyltransferase folate-binding domain; Glycine cleavage system P-protein; TIGRFAM: glycine dehydrogenase (decarboxylating); glycine cleavage system T protein
YP_005474292.1	PFAM: Phosphofructokinase; TIGRFAM: phosphofructokinase
YP_005474293.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; His Kinase A (phosphoacceptor) domain
YP_005474294.1	PFAM: Porphyromonas-type peptidyl-arginine deiminase
YP_005474295.1	PFAM: Carbon-nitrogen hydrolase
YP_005474296.1	PFAM: Helix-turn-helix
YP_005474297.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005474298.1	PFAM: NADH:flavin oxidoreductase / NADH oxidase family
YP_005474300.1	PFAM: Pterin binding enzyme; Vitamin B12 dependent methionine synthase, activation domain; B12 binding domain; Homocysteine S-methyltransferase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase
YP_005474306.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
YP_005474307.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
YP_005474308.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005474309.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005474310.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005474311.1	PFAM: ABC transporter
YP_005474312.1	PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein
YP_005474313.1	PFAM: Protein of unknown function (DUF330); Protein of unknown function, DUF481
YP_005474314.1	PFAM: mce related protein
YP_005474318.1	PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter
YP_005474319.1	PFAM: Cytochrome C biogenesis protein transmembrane region
YP_005474320.1	PFAM: AhpC/TSA family; TIGRFAM: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily
YP_005474321.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_005474322.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005474323.1	PFAM: C4-dicarboxylate anaerobic carrier
YP_005474324.1	PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain
YP_005474325.1	PFAM: TrkA-N domain; TrkA-C domain
YP_005474326.1	PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family
YP_005474327.1	PFAM: Surface antigen
YP_005474328.1	PFAM: FeoA domain; Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain
YP_005474329.1	PFAM: Smr domain
YP_005474330.1	PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family
YP_005474331.1	PFAM: Hpt domain
YP_005474332.1	PFAM: Glycogen synthase
YP_005474333.1	PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase
YP_005474334.1	PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase
YP_005474335.1	PFAM: Voltage gated chloride channel
YP_005474336.1	PFAM: Metalloenzyme superfamily; BPG-independent PGAM N-terminus (iPGM_N); TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
YP_005474337.1	PFAM: Protein of unknown function (DUF342)
YP_005474338.1	PFAM: Positive regulator of sigma(E), RseC/MucC
YP_005474339.1	PFAM: Putative Fe-S cluster
YP_005474340.1	PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit
YP_005474341.1	PFAM: NQR2, RnfD, RnfE family; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit
YP_005474342.1	PFAM: FMN-binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, G subunit
YP_005474343.1	PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit
YP_005474344.1	PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit
YP_005474345.1	PFAM: High-affinity nickel-transport protein
YP_005474346.1	PFAM: Dihydroorotate dehydrogenase
YP_005474347.1	PFAM: Flavodoxin; TIGRFAM: flavodoxin, long chain
YP_005474348.1	PFAM: Domain of unknown function; domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric
YP_005474349.1	PFAM: Dihydroorotate dehydrogenase
YP_005474350.1	PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial
YP_005474351.1	PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG
YP_005474352.1	PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11
YP_005474353.1	PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast
YP_005474354.1	PFAM: Ribosomal protein L10
YP_005474355.1	PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12
YP_005474356.1	PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit
YP_005474357.1	PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 5; RNA polymerase Rpb1, domain 3; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form
YP_005474358.1	PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle
YP_005474359.1	PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle
YP_005474360.1	PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU
YP_005474361.1	PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle
YP_005474362.1	PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial
YP_005474363.1	PFAM: Ribosomal protein L4/L1 family; TIGRFAM: 50S ribosomal protein L4, bacterial/organelle
YP_005474364.1	PFAM: Ribosomal protein L23
YP_005474365.1	PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar
YP_005474366.1	PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle
YP_005474367.1	PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type
YP_005474368.1	PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type
YP_005474369.1	PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle
YP_005474370.1	PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29
YP_005474371.1	PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17
YP_005474372.1	PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle
YP_005474373.1	PFAM: KOW motif; TIGRFAM: ribosomal protein L24, bacterial/organelle
YP_005474374.1	PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5
YP_005474375.1	PFAM: Ribosomal protein S14p/S29e
YP_005474376.1	PFAM: Ribosomal protein S8
YP_005474377.1	PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type
YP_005474378.1	PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type
YP_005474379.1	PFAM: Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type
YP_005474380.1	PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle; manually curated
YP_005474381.1	PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle
YP_005474382.1	PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit
YP_005474383.1	PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13
YP_005474384.1	PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11
YP_005474385.1	PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type
YP_005474386.1	PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17
YP_005474388.1	PFAM: Type I restriction modification DNA specificity domain
YP_005474389.1	PFAM: RNase H
YP_005474390.1	PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein
YP_005474391.1	PFAM: Trypsin
YP_005474392.1	PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit
YP_005474394.1	PFAM: Protein of unknown function (DUF445)
YP_005474396.1	PFAM: Glycosyltransferase family 28 N-terminal domain; Glycosyltransferase family 28 C-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
YP_005474397.1	PFAM: Colicin V production protein
YP_005474399.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_005474400.1	PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain
YP_005474401.1	PFAM: DnaJ domain
YP_005474402.1	PFAM: Amino acid kinase family; TIGRFAM: aspartate kinase
YP_005474403.1	PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)
YP_005474404.1	PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP
YP_005474405.1	PFAM: Protein of unknown function (DUF2466); DEAD/DEAH box helicase
YP_005474406.1	PFAM: Chaperonin 10 Kd subunit
YP_005474407.1	PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_005474408.1	PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG
YP_005474409.1	PFAM: TM2 domain
YP_005474411.1	PFAM: Acetyltransferase (GNAT) family
YP_005474412.1	PFAM: Acetyltransferase (GNAT) family
YP_005474414.1	PFAM: Response regulator receiver domain
YP_005474416.1	PFAM: Ammonium Transporter Family; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hpt domain; TIGRFAM: ammonium transporter
YP_005474417.1	PFAM: ABC 3 transport family
YP_005474418.1	PFAM: ABC transporter
YP_005474419.1	PFAM: NAD dependent epimerase/dehydratase family
YP_005474420.1	PFAM: DNA polymerase family B; DNA polymerase family B, exonuclease domain
YP_005474421.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Cyclic nucleotide-binding domain
YP_005474422.1	PFAM: CAAX amino terminal protease family
YP_005474423.1	PFAM: Bacterial transferase hexapeptide (three repeats)
YP_005474424.1	PFAM: Amylo-alpha-1,6-glucosidase; TIGRFAM: glycogen debranching enzyme, archaeal type, putative
YP_005474427.1	PFAM: Peptidase M30
YP_005474429.1	PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-bisphosphate aldolase, class II, yeast/E. coli subtype
YP_005474430.1	PFAM: Ribonuclease BN-like family
YP_005474431.1	PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein
YP_005474434.1	PFAM: Secretory lipase
YP_005474435.1	PFAM: Alginate O-acetyl transferase AlgF
YP_005474436.1	PFAM: MBOAT family
YP_005474438.1	PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein
YP_005474439.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA
YP_005474440.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstC
YP_005474441.1	TIGRFAM: phosphate ABC transporter, phosphate-binding protein
YP_005474442.1	PFAM: GtrA-like protein
YP_005474444.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005474445.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA
YP_005474446.1	PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein
YP_005474448.1	PFAM: Na+/Pi-cotransporter
YP_005474449.1	TIGRFAM: phosphate binding protein
YP_005474450.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold
YP_005474451.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005474452.1	PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU
YP_005474455.1	PFAM: Glycosyltransferase family 28 C-terminal domain; TIGRFAM: conserved hypothetical protein
YP_005474456.1	PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: arginine decarboxylase, biosynthetic
YP_005474457.1	PFAM: Saccharopine dehydrogenase
YP_005474458.1	PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; TIGRFAM: carboxynorspermidine decarboxylase
YP_005474461.1	PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase, putative
YP_005474462.1	PFAM: UvrB/uvrC motif
YP_005474463.1	PFAM: Outer membrane lipoprotein carrier protein LolA
YP_005474465.1	PFAM: UvrD/REP helicase
YP_005474469.1	PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family
YP_005474470.1	PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein
YP_005474472.1	PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type
YP_005474473.1	PFAM: Ribosomal protein S9/S16
YP_005474474.1	PFAM: RecX family
YP_005474475.1	PFAM: Response regulator receiver domain; TIGRFAM: DNA binding domain, excisionase family
YP_005474476.1	PFAM: Response regulator receiver domain
YP_005474477.1	PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase
YP_005474478.1	PFAM: Anticodon binding domain; YbaK / prolyl-tRNA synthetases associated domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family II; manually curated
YP_005474479.1	PFAM: Acetyltransferase (GNAT) family; Uncharacterised protein family (UPF0158)
YP_005474480.1	PFAM: Acyltransferase
YP_005474483.1	PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group II
YP_005474484.1	PFAM: Nucleotidyl transferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
YP_005474485.1	PFAM: Asparaginase
YP_005474488.1	PFAM: Subtilase family
YP_005474489.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005474490.1	PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; PTS HPr component phosphorylation site; PEP-utilising enzyme, N-terminal; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; Phosphotransferase System HPr (HPr) Family
YP_005474491.1	PFAM: pfkB family carbohydrate kinase; TIGRFAM: 1-phosphofructokinase; hexose kinase, 1-phosphofructokinase family
YP_005474492.1	PFAM: Phosphotransferase system, EIIC; PTS system, Lactose/Cellobiose specific IIB subunit; TIGRFAM: PTS system, fructose-specific, IIB component; PTS system, fructose subfamily, IIC component
YP_005474494.1	PFAM: Hsp33 protein
YP_005474495.1	PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase
YP_005474496.1	PFAM: Alpha amylase, catalytic domain; TIGRFAM: trehalose synthase-fused probable maltokinase; trehalose synthase
YP_005474497.1	PFAM: Alpha amylase, catalytic domain
YP_005474500.1	PFAM: Carbohydrate phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases
YP_005474501.1	PFAM: MgtC family
YP_005474502.1	TIGRFAM: methyltransferase, FkbM family
YP_005474504.1	PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain
YP_005474505.1	PFAM: Bacterial extracellular solute-binding protein
YP_005474506.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005474507.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005474511.1	PFAM: O-Glycosyl hydrolase family 30
YP_005474512.1	PFAM: Glycosyl hydrolases family 16; Carbohydrate binding domain
YP_005474513.1	PFAM: ROK family; MarR family
YP_005474514.1	PFAM: Alpha amylase, catalytic domain
YP_005474516.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase
YP_005474517.1	PFAM: GGDEF domain; Response regulator receiver domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005474518.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_005474519.1	PFAM: C-terminal regulatory domain of Threonine dehydratase; Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine ammonia-lyase, biosynthetic, long form
YP_005474520.1	PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_005474521.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_005474522.1	PFAM: ABC transporter
YP_005474524.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; Rhodanese-like domain; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
YP_005474525.1	PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
YP_005474526.1	PFAM: Ferric uptake regulator family
YP_005474527.1	PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005474528.1	PFAM: SNARE associated Golgi protein
YP_005474529.1	PFAM: NlpC/P60 family
YP_005474530.1	PFAM: Methyltransferase small domain
YP_005474531.1	PFAM: Metallo-beta-lactamase superfamily
YP_005474532.1	PFAM: Protein of unknown function (DUF3006)
YP_005474533.1	PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005474534.1	PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005474536.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain
YP_005474542.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Bacterial extracellular solute-binding proteins, family 3; PAS fold; TIGRFAM: PAS domain S-box
YP_005474543.1	PFAM: Response regulator receiver domain
YP_005474544.1	PFAM: FecR protein
YP_005474546.1	PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005474548.1	PFAM: ATP cone domain; Ribonucleotide reductase, small chain
YP_005474549.1	PFAM: Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, alpha chain
YP_005474552.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain
YP_005474554.1	PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain
YP_005474555.1	PFAM: Protein of unknown function (DUF429)
YP_005474556.1	PFAM: ABC transporter
YP_005474557.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005474558.1	PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family
YP_005474559.1	PFAM: Sodium/hydrogen exchanger family; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
YP_005474560.1	PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic
YP_005474561.1	PFAM: Nucleotidyltransferase domain
YP_005474563.1	PFAM: Transposase, Mutator family
YP_005474564.1	PFAM: Methyltransferase domain; Glycosyl transferases group 1
YP_005474566.1	PFAM: Acyl-CoA thioester hydrolase/BAAT N-terminal region; BAAT / Acyl-CoA thioester hydrolase C terminal
YP_005474567.1	PFAM: ABC transporter transmembrane region; ABC transporter; Peptidase C39 family; TIGRFAM: ABC-type bacteriocin transporter; type I secretion system ABC transporter, HlyB family; manually curated
YP_005474570.1	PFAM: Nucleotidyltransferase domain
YP_005474571.1	PFAM: HEPN domain
YP_005474572.1	PFAM: Transposase, Mutator family
YP_005474573.1	PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt)
YP_005474574.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
YP_005474576.1	PFAM: Alpha amylase, catalytic domain
YP_005474577.1	PFAM: Protein of unknown function DUF115
YP_005474578.1	PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain
YP_005474579.1	PFAM: Peptidase S26; Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type
YP_005474580.1	PFAM: Peptidase family M23; LysM domain
YP_005474582.1	PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SEC-C motif; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit
YP_005474584.1	PFAM: YjeF-related protein N-terminus; Carbohydrate kinase; TIGRFAM: yjeF N-terminal region; yjeF C-terminal region, hydroxyethylthiazole kinase-related
YP_005474587.1	PFAM: NUDIX domain; TIGRFAM: mutator mutT protein
YP_005474588.1	PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase
YP_005474589.1	PFAM: Helicase conserved C-terminal domain; Domain of unknown function (DUF1998); DEAD/DEAH box helicase
YP_005474591.1	PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; TIGRFAM: glycogen/starch synthases, ADP-glucose type
YP_005474592.1	PFAM: Acetyltransferase (GNAT) family
YP_005474593.1	PFAM: Glycosyl hydrolase family 3 N terminal domain
YP_005474594.1	PFAM: FlgN protein
YP_005474595.1	PFAM: Domain of unknown function (DUF1078); TIGRFAM: flagellar hook-associated protein FlgK
YP_005474596.1	PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; TIGRFAM: flagellar hook-associated protein 3
YP_005474597.1	PFAM: FliW protein
YP_005474598.1	PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA)
YP_005474599.1	PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ
YP_005474600.1	PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family
YP_005474602.1	PFAM: PilZ domain
YP_005474604.1	PFAM: Flagellar hook-associated protein 2 C-terminus
YP_005474605.1	PFAM: FlaG protein
YP_005474606.1	PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region
YP_005474607.1	PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region
YP_005474608.1	PFAM: Tetratricopeptide repeat
YP_005474609.1	PFAM: PilZ domain
YP_005474610.1	PFAM: pfkB family carbohydrate kinase
YP_005474611.1	PFAM: Cell division protein ZapA
YP_005474613.1	PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20
YP_005474614.1	PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35
YP_005474615.1	PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3
YP_005474618.1	PFAM: Flagellar filament outer layer protein Flaa
YP_005474619.1	PFAM: Flagellar filament outer layer protein Flaa
YP_005474620.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Cyclic nucleotide-binding domain
YP_005474622.1	PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family
YP_005474623.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005474624.1	PFAM: Phosphoenolpyruvate carboxylase; manually curated
YP_005474625.1	PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain
YP_005474626.1	PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
YP_005474627.1	PFAM: GTP cyclohydrolase II; TIGRFAM: GTP cyclohydrolase II; manually curated
YP_005474628.1	PFAM: UvrD/REP helicase
YP_005474629.1	PFAM: NOL1/NOP2/sun family
YP_005474630.1	PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
YP_005474631.1	PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family
YP_005474635.1	PFAM: DUF218 domain
YP_005474636.1	PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005474637.1	PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005474638.1	TIGRFAM: PAS domain S-box
YP_005474639.1	PFAM: GAF domain; PAS fold; TIGRFAM: PAS domain S-box
YP_005474640.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; Hpt domain; TIGRFAM: PAS domain S-box
YP_005474641.1	PFAM: Protein of unknown function (DUF1566)
YP_005474646.1	PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_005474647.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_005474648.1	PFAM: ABC transporter
YP_005474650.1	PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005474651.1	PFAM: Bacterial transcription activator, effector binding domain
YP_005474653.1	PFAM: Glutaredoxin; TIGRFAM: Glutaredoxin-like protein, YruB-family
YP_005474655.1	PFAM: PemK-like protein
YP_005474656.1	PFAM: Protein of unknown function (DUF2281)
YP_005474657.1	PFAM: Putative transposase, YhgA-like; TIGRFAM: conserved hypothetical protein (putative transposase or invertase)
YP_005474660.1	PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase; manually curated
YP_005474662.1	PFAM: Restriction endonuclease
YP_005474664.1	PFAM: Uncharacterized conserved protein (DUF2075); GIY-YIG catalytic domain
YP_005474665.1	PFAM: HNH endonuclease
YP_005474666.1	PFAM: Helix-turn-helix; Integrase core domain
YP_005474667.1	PFAM: IstB-like ATP binding protein
YP_005474668.1	PFAM: Transposase, Mutator family
YP_005474670.1	PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain
YP_005474671.1	PFAM: ParB-like nuclease domain
YP_005474672.1	PFAM: DNA mismatch endonuclease Vsr; TIGRFAM: DNA mismatch endonuclease Vsr; manually curated
YP_005474673.1	PFAM: C-5 cytosine-specific DNA methylase; TIGRFAM: DNA-methyltransferase (dcm)
YP_005474674.1	PFAM: Protein of unknown function DUF55
YP_005474675.1	PFAM: Domain of unknown function (DUF2357); Protein of unknown function (DUF524)
YP_005474677.1	PFAM: Transposase, Mutator family
YP_005474678.1	PFAM: Domain of unknown function (DUF3427)
YP_005474679.1	PFAM: Mycoplasma protein of unknown function, DUF285
YP_005474682.1	PFAM: Zc3h12a-like Ribonuclease domain
YP_005474684.1	PFAM: Protein of unknown function (DUF2283)
YP_005474686.1	PFAM: Putative transposase, YhgA-like
YP_005474688.1	PFAM: Cysteine-rich secretory protein family
YP_005474689.1	PFAM: Alpha amylase, catalytic domain; S-layer homology domain; Domain of unknown function (DUF1939)
YP_005474690.1	PFAM: Flavin containing amine oxidoreductase
YP_005474691.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005474693.1	PFAM: Spermine/spermidine synthase
YP_005474694.1	PFAM: Radical SAM superfamily
YP_005474695.1	PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport
YP_005474696.1	PFAM: LD-carboxypeptidase
YP_005474697.1	PFAM: GDSL-like Lipase/Acylhydrolase
YP_005474698.1	PFAM: Rdx family; TIGRFAM: selT/selW/selH selenoprotein domain
YP_005474699.1	PFAM: FAD binding domain of DNA photolyase; Deoxyribodipyrimidine photo-lyase-related protein
YP_005474700.1	PFAM: short chain dehydrogenase
YP_005474701.1	PFAM: Flavin containing amine oxidoreductase
YP_005474702.1	PFAM: Prolyl oligopeptidase family
YP_005474704.1	PFAM: ATPase family associated with various cellular activities (AAA)
YP_005474706.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB
YP_005474707.1	PFAM: Major Facilitator Superfamily
YP_005474708.1	PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold
YP_005474711.1	PFAM: CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain
YP_005474712.1	PFAM: PEGA domain
YP_005474714.1	PFAM: CYTH domain; TIGRFAM: adenylyl cyclase CyaB, putative
YP_005474716.1	PFAM: MarC family integral membrane protein; TIGRFAM: membrane protein, MarC family
YP_005474717.1	PFAM: Diacylglycerol kinase catalytic domain
YP_005474718.1	PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005474719.1	PFAM: Protein of unknown function, DUF255
YP_005474720.1	PFAM: AMP-binding enzyme
YP_005474721.1	PFAM: Sodium/hydrogen exchanger family
YP_005474723.1	PFAM: Sodium:solute symporter family; TIGRFAM: sodium/proline symporter; transporter, SSS family
YP_005474724.1	PFAM: Major Facilitator Superfamily
YP_005474725.1	PFAM: Major Facilitator Superfamily
YP_005474726.1	PFAM: Macro domain
YP_005474727.1	PFAM: Protein of unknown function DUF72
YP_005474728.1	PFAM: Aldo/keto reductase family; TIGRFAM: voltage-dependent potassium channel beta subunit, animal
YP_005474729.1	PFAM: Nitroreductase family
YP_005474730.1	PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein
YP_005474731.1	PFAM: Domain of unknown function (DUF336)
YP_005474732.1	PFAM: Sodium:neurotransmitter symporter family
YP_005474733.1	PFAM: PilZ domain
YP_005474734.1	PFAM: Adenylate and Guanylate cyclase catalytic domain; HAMP domain; Cache domain
YP_005474737.1	PFAM: CheC-like family
YP_005474738.1	PFAM: Gamma-glutamyltranspeptidase
YP_005474739.1	PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase
YP_005474741.1	PFAM: OmpA family
YP_005474743.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005474744.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005474745.1	PFAM: Bacterial extracellular solute-binding protein
YP_005474746.1	PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_005474747.1	PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005474748.1	PFAM: Stage II sporulation protein E (SpoIIE)
YP_005474749.1	PFAM: Bacterial regulatory proteins, luxR family
YP_005474750.1	PFAM: Sodium:solute symporter family
YP_005474752.1	PFAM: MMPL family
YP_005474755.1	PFAM: SlyX
YP_005474758.1	PFAM: Domain of unknown function (DUF74)
YP_005474759.1	PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein
YP_005474760.1	PFAM: Late embryogenesis abundant protein
YP_005474761.1	PFAM: Periplasmic solute binding protein family
YP_005474762.1	PFAM: Domain of unknown function (DUF227)
YP_005474763.1	PFAM: Inositol monophosphatase family
YP_005474765.1	PFAM: Uncharacterized ACR, YdiU/UPF0061 family
YP_005474768.1	PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase
YP_005474769.1	PFAM: Bacterial inner membrane protein
YP_005474773.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005474775.1	PFAM: ABC transporter
YP_005474776.1	PFAM: BioY family
YP_005474777.1	PFAM: D-alanyl-D-alanine carboxypeptidase
YP_005474778.1	PFAM: ABC transporter substrate binding protein
YP_005474779.1	PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005474780.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005474781.1	PFAM: Bacterial regulatory proteins, gntR family
YP_005474784.1	PFAM: Alpha amylase, catalytic domain
YP_005474785.1	PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005474786.1	PFAM: FecR protein
YP_005474789.1	PFAM: Alpha amylase, catalytic domain
YP_005474790.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005474792.1	PFAM: ABC transporter
YP_005474793.1	PFAM: Outer membrane efflux protein
YP_005474794.1	PFAM: ABC transporter
YP_005474795.1	TIGRFAM: ABC transporter efflux protein, DrrB family
YP_005474797.1	PFAM: Acetyltransferase (GNAT) family
YP_005474799.1	PFAM: PIN domain; manually curated
YP_005474800.1	PFAM: Ribbon-helix-helix protein, copG family
YP_005474801.1	PFAM: Group II intron, maturase-specific domain; Reverse transcriptase (RNA-dependent DNA polymerase)
YP_005474803.1	PFAM: Transposase, Mutator family
YP_005474804.1	PFAM: Acetyltransferase (GNAT) family
YP_005474809.1	PFAM: Transposase, Mutator family
YP_005474810.1	PFAM: Reverse transcriptase (RNA-dependent DNA polymerase)
YP_005474811.1	PFAM: Reverse transcriptase (RNA-dependent DNA polymerase)
YP_005474813.1	PFAM: Transposase, Mutator family
YP_005474815.1	manually curated
YP_005474819.1	PFAM: Major Facilitator Superfamily
YP_005474820.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005474821.1	PFAM: Beta-lactamase
YP_005474822.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005474823.1	PFAM: ABC transporter
YP_005474825.1	PFAM: Beta-lactamase
YP_005474826.1	PFAM: Acetyltransferase (GNAT) family
YP_005474828.1	PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative
YP_005474829.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_005474830.1	PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain
YP_005474831.1	PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufSfamily
YP_005474832.1	PFAM: NifU-like N terminal domain
YP_005474834.1	PFAM: Adenylate and Guanylate cyclase catalytic domain; PAS fold; TIGRFAM: PAS domain S-box
YP_005474835.1	PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_005474838.1	PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005474839.1	PFAM: Glycosyl hydrolase family 3 N terminal domain
YP_005474841.1	PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases
YP_005474842.1	PFAM: CotH protein
YP_005474843.1	PFAM: VTC domain
YP_005474845.1	PFAM: Divergent PAP2 family
YP_005474847.1	PFAM: Domain of unknown function (DUF1925); Glycosyl hydrolase family 57; Domain of unknown function (DUF1926)
YP_005474849.1	PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2; manually curated
YP_005474850.1	PFAM: Response regulator receiver domain
YP_005474852.1	PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY
YP_005474854.1	PFAM: Predicted permease; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family
YP_005474855.1	PFAM: ABC transporter
YP_005474856.1	PFAM: Predicted permease
YP_005474858.1	PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; UvrB/uvrC motif; ATPase family associated with various cellular activities (AAA)
YP_005474859.1	PFAM: BFD-like [2Fe-2S] binding domain; FAD dependent oxidoreductase
YP_005474860.1	PFAM: Response regulator receiver domain
YP_005474861.1	PFAM: ABC1 family
YP_005474863.1	PFAM: RNA polymerase Rpb6
YP_005474864.1	PFAM: IPP transferase; TIGRFAM: tRNA dimethylallyltransferase
YP_005474865.1	manually curated
YP_005474866.1	PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase
YP_005474867.1	PFAM: DisA bacterial checkpoint controller nucleotide-binding; TIGRFAM: TIGR00159 family protein
YP_005474868.1	PFAM: YbbR-like protein
YP_005474869.1	PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantetheine--protein transferase domain; holo-[acyl-carrier-protein] synthase
YP_005474870.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2225)
YP_005474871.1	PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I
YP_005474872.1	PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4
YP_005474873.1	PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: primosomal protein N'
YP_005474874.1	PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg)
YP_005474875.1	PFAM: DisA bacterial checkpoint controller nucleotide-binding; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
YP_005474879.1	PFAM: FecR protein
YP_005474881.1	PFAM: HAMP domain; Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005474882.1	PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase
YP_005474884.1	PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase
YP_005474885.1	PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase
YP_005474886.1	PFAM: PASTA domain
YP_005474889.1	PFAM: Substrate binding domain of ABC-type glycine betaine transport system
YP_005474890.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005474891.1	PFAM: ABC transporter
YP_005474892.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005474893.1	PFAM: Probable molybdopterin binding domain
YP_005474894.1	PFAM: Zinc carboxypeptidase
YP_005474895.1	PFAM: Calcineurin-like phosphoesterase
YP_005474896.1	PFAM: Protein of unknown function (DUF3592)
YP_005474897.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain
YP_005474898.1	PFAM: EAL domain; Response regulator receiver domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005474899.1	PFAM: Alpha amylase, N-terminal ig-like domain; Alpha amylase, catalytic domain
YP_005474900.1	PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family; TIGRFAM: putative nicotinate phosphoribosyltransferase
YP_005474901.1	PFAM: Isochorismatase family
YP_005474902.1	PFAM: Uncharacterized ACR (DUF711)
YP_005474903.1	PFAM: ACT domain
YP_005474904.1	PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains
YP_005474905.1	PFAM: Radical SAM superfamily; TIGRFAM: radical SAM protein, TIGR01212 family
YP_005474906.1	PFAM: Universal stress protein family; Sodium/hydrogen exchanger family; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
YP_005474909.1	PFAM: Ferric reductase like transmembrane component; Oxidoreductase NAD-binding domain; FAD-binding domain
YP_005474913.1	PFAM: Transposase, Mutator family
YP_005474915.1	PFAM: Mycoplasma protein of unknown function, DUF285; TIGRFAM: bacterial surface protein 26-residue repeat
YP_005474916.1	PFAM: Mycoplasma protein of unknown function, DUF285; TIGRFAM: bacterial surface protein 26-residue repeat
YP_005474917.1	PFAM: Transposase, Mutator family
YP_005474920.1	PFAM: Mycoplasma protein of unknown function, DUF285; TIGRFAM: bacterial surface protein 26-residue repeat
YP_005474921.1	PFAM: Transposase, Mutator family
YP_005474923.1	PFAM: Oligopeptidase F; Peptidase family M3; TIGRFAM: oligoendopeptidase F
YP_005474924.1	PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; manually curated
YP_005474926.1	PFAM: DHHA1 domain; DHH family
YP_005474928.1	PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase
YP_005474929.1	PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La
YP_005474930.1	PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX)
YP_005474931.1	PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP
YP_005474932.1	PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Bacterial trigger factor protein (TF); Bacterial trigger factor protein (TF) C-terminus; TIGRFAM: trigger factor
YP_005474933.1	PFAM: MgsA AAA+ ATPase C terminal; ATPase family associated with various cellular activities (AAA)
YP_005474937.1	PFAM: Bacterial extracellular solute-binding protein
YP_005474938.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005474939.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005474940.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005474941.1	PFAM: Heavy-metal-associated domain
YP_005474942.1	PFAM: Phosphoglycerate mutase family
YP_005474943.1	PFAM: ABC transporter
YP_005474944.1	PFAM: FAD binding domain of DNA photolyase; DNA photolyase; TIGRFAM: photolyase PhrII
YP_005474945.1	PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain
YP_005474946.1	PFAM: Response regulator receiver domain
YP_005474947.1	PFAM: Tetratricopeptide repeat
YP_005474948.1	PFAM: Acetokinase family; TIGRFAM: acetate kinase
YP_005474949.1	PFAM: Domain of unknown function(DUF2779)
YP_005474950.1	PFAM: CRS1 / YhbY (CRM) domain; TIGRFAM: putative RNA-binding protein, YhbY family
YP_005474951.1	PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005474952.1	PFAM: MarR family
YP_005474954.1	PFAM: ABC transporter; CBS domain; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit
YP_005474955.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005474956.1	PFAM: Substrate binding domain of ABC-type glycine betaine transport system
YP_005474958.1	PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase
YP_005474959.1	PFAM: Phosphofructokinase; TIGRFAM: diphosphate--fructose-6-phosphate 1-phosphotransferase
YP_005474960.1	PFAM: Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
YP_005474962.1	PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: small GTP-binding protein domain
YP_005474963.1	PFAM: FeoA domain
YP_005474964.1	PFAM: Nicotianamine synthase protein
YP_005474965.1	PFAM: Phosphomannose isomerase type I; TIGRFAM: mannose-6-phosphate isomerase, class I; manually curated
YP_005474966.1	PFAM: Uncharacterized BCR, YaiI/YqxD family COG1671
YP_005474967.1	PFAM: Flavodoxin; Metallo-beta-lactamase superfamily
YP_005474968.1	PFAM: Hemerythrin HHE cation binding domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; TIGRFAM: hemerythrin-like metal-binding domain
YP_005474969.1	PFAM: TraB family
YP_005474970.1	PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: asparaginyl-tRNA synthetase
YP_005474971.1	PFAM: Basic membrane protein
YP_005474972.1	PFAM: Adenosine/AMP deaminase
YP_005474973.1	PFAM: Phosphorylase superfamily; TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine/guanosine/xanthosine phosphorylase family
YP_005474974.1	PFAM: ABC transporter
YP_005474975.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005474976.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005474977.1	PFAM: DeoC/LacD family aldolase; TIGRFAM: deoxyribose-phosphate aldolase
YP_005474978.1	PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric
YP_005474979.1	PFAM: Amidinotransferase
YP_005474980.1	PFAM: Trehalose-phosphatase; Glycosyltransferase family 20; TIGRFAM: trehalose-phosphatase; alpha,alpha-trehalose-phosphate synthase [UDP-forming]; HAD-superfamily hydrolase, subfamily IIB
YP_005474981.1	PFAM: Glycosyl hydrolase family 65, C-terminal domain; Glycosyl hydrolase family 65, N-terminal domain; Glycosyl hydrolase family 65 central catalytic domain
YP_005474982.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: beta-phosphoglucomutase; beta-phosphoglucomutase family hydrolase; haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
YP_005474983.1	PFAM: Dihydrouridine synthase (Dus)
YP_005474984.1	PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_005474985.1	PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I
YP_005474988.1	PFAM: EAL domain
YP_005474989.1	PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type
YP_005474990.1	PFAM: Protein of unknown function (DUF3276)
YP_005474991.1	PFAM: Ribonuclease HII
YP_005474992.1	PFAM: RecF/RecN/SMC N terminal domain
YP_005474996.1	PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein
YP_005474997.1	PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16
YP_005474999.1	PFAM: RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM
YP_005475000.1	PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase
YP_005475001.1	PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type
YP_005475003.1	PFAM: FlhB HrpN YscU SpaS Family
YP_005475004.1	PFAM: HD domain
YP_005475005.1	PFAM: Uncharacterised protein family UPF0102; TIGRFAM: TIGR00252 family protein
YP_005475010.1	PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: radical SAM methylthiotransferase, MiaB/RimO family
YP_005475011.1	PFAM: Monomeric isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, monomeric type
YP_005475012.1	PFAM: FMN-binding domain
YP_005475013.1	PFAM: Radical SAM superfamily
YP_005475014.1	PFAM: Bacterial regulatory proteins, luxR family
YP_005475019.1	TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
YP_005475021.1	PFAM: Formylglycine-generating sulfatase enzyme
YP_005475023.1	PFAM: Putative transposase, YhgA-like; TIGRFAM: conserved hypothetical protein (putative transposase or invertase)
YP_005475026.1	PFAM: Peptidase family M23
YP_005475030.1	PFAM: Transposase, Mutator family
YP_005475032.1	PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: radical SAM methylthiotransferase, MiaB/RimO family
YP_005475033.1	PFAM: PspC domain
YP_005475035.1	PFAM: Uncharacterized conserved protein (DUF2161)
YP_005475036.1	PFAM: Domain of unknown function (DUF389); TIGRFAM: uncharacterized hydrophobic domain; TIGR00341 family protein
YP_005475038.1	PFAM: Adenylate and Guanylate cyclase catalytic domain; 7TM diverse intracellular signalling
YP_005475039.1	PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005475041.1	PFAM: ABC-2 type transporter
YP_005475042.1	PFAM: ABC transporter
YP_005475043.1	PFAM: MerR family regulatory protein
YP_005475044.1	PFAM: Major Facilitator Superfamily
YP_005475045.1	PFAM: Protein of unknown function (DUF3095)
YP_005475046.1	PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase
YP_005475048.1	PFAM: Peptidase family M23
YP_005475049.1	PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00730 family protein
YP_005475050.1	PFAM: 6-phosphogluconate dehydrogenase, C-terminal domain; NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 6-phosphogluconate dehydrogenase (decarboxylating)
YP_005475051.1	PFAM: Acylphosphatase
YP_005475053.1	PFAM: Acetyltransferase (GNAT) family; Amino acid kinase family; TIGRFAM: amino-acid N-acetyltransferase
YP_005475054.1	PFAM: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain
YP_005475055.1	TIGRFAM: TIGR03545 family protein
YP_005475056.1	TIGRFAM: TIGR03546 family protein
YP_005475057.1	TIGRFAM: deoxycytidine triphosphate deaminase
YP_005475059.1	PFAM: UTP--glucose-1-phosphate uridylyltransferase
YP_005475060.1	PFAM: Glucokinase; TIGRFAM: glucokinase, proteobacterial type
YP_005475062.1	PFAM: Fe-S metabolism associated domain
YP_005475063.1	PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type; signal peptide peptidase SppA, 67K type
YP_005475064.1	PFAM: Exonuclease; Exonuclease C-terminal
YP_005475065.1	PFAM: Glycosyl hydrolases family 32 N-terminal domain
YP_005475066.1	PFAM: Glycosyl transferases group 1; Domain of unknown function (DUF3524)
YP_005475067.1	PFAM: Lycopene cyclase protein
YP_005475068.1	PFAM: Protein of unknown function (DUF422)
YP_005475069.1	PFAM: GAF domain; Stage II sporulation protein E (SpoIIE)
YP_005475070.1	PFAM: Protein of unknown function (DUF752)
YP_005475071.1	PFAM: Domain of unknown function (DUF1820)
YP_005475073.1	PFAM: 7TM diverse intracellular signalling; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005475074.1	PFAM: SpoU rRNA Methylase family; manually curated
YP_005475075.1	PFAM: Peptidase family M23
YP_005475076.1	PFAM: tRNA (Uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA
YP_005475077.1	PFAM: Putative RNA methylase family UPF0020; THUMP domain
YP_005475078.1	PFAM: Phospholipase D Active site motif
YP_005475079.1	PFAM: Major Facilitator Superfamily; TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; manually curated
YP_005475081.1	PFAM: YeeE/YedE family (DUF395)
YP_005475082.1	PFAM: Rhodanese-like domain
YP_005475083.1	PFAM: SirA-like protein
YP_005475084.1	PFAM: AMP-binding enzyme
YP_005475085.1	PFAM: AMP-binding enzyme
YP_005475086.1	PFAM: Sodium:solute symporter family
YP_005475088.1	PFAM: CBS domain; ACT domain
YP_005475089.1	PFAM: Mechanosensitive ion channel
YP_005475090.1	PFAM: Permease family
YP_005475091.1	PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family
YP_005475092.1	PFAM: Transposase, Mutator family
YP_005475094.1	PFAM: Cyclic nucleotide-binding domain
YP_005475095.1	PFAM: Aldo/keto reductase family
YP_005475096.1	PFAM: Copper binding proteins, plastocyanin/azurin family
YP_005475098.1	PFAM: Iron-containing alcohol dehydrogenase
YP_005475099.1	PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005475100.1	PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region
YP_005475102.1	PFAM: Lipase (class 3)
YP_005475103.1	PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase
YP_005475104.1	PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase
YP_005475105.1	PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit
YP_005475106.1	PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD
YP_005475107.1	PFAM: Permease family; TIGRFAM: uracil-xanthine permease
YP_005475110.1	PFAM: EAL domain; Domain of unknown function (DUF3369); GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005475111.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005475112.1	PFAM: Bacterial extracellular solute-binding protein
YP_005475113.1	PFAM: Aspartate-ammonia ligase; TIGRFAM: aspartate--ammonia ligase, AsnA-type
YP_005475114.1	PFAM: Response regulator receiver domain
YP_005475117.1	TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies)
YP_005475118.1	PFAM: Transposase, Mutator family
YP_005475120.1	PFAM: Protein of unknown function (DUF1113)
YP_005475121.1	PFAM: UbiA prenyltransferase family
YP_005475122.1	PFAM: HhH-GPD superfamily base excision DNA repair protein; Iron-sulfur binding domain of endonuclease III; Helix-hairpin-helix motif; TIGRFAM: endonuclease III
YP_005475123.1	PFAM: Domain of unknown function (DUF1730); TIGRFAM: iron-sulfur cluster binding protein, putative
YP_005475124.1	PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase (subfamily 1) family protein
YP_005475125.1	PFAM: Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain
YP_005475129.1	PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein
YP_005475130.1	PFAM: Recombinase; Resolvase, N terminal domain
YP_005475132.1	TIGRFAM: DNA binding domain, excisionase family
YP_005475133.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_005475134.1	PFAM: ParB-like nuclease domain
YP_005475139.1	PFAM: Glutaredoxin
YP_005475142.1	PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit
YP_005475143.1	PFAM: Uncharacterized conserved protein (DUF2081); Protein of unknown function DUF262
YP_005475144.1	PFAM: Protein of unknown function (DUF3006); manually curated
YP_005475145.1	PFAM: Metallo-beta-lactamase superfamily; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region
YP_005475147.1	PFAM: Mycoplasma protein of unknown function, DUF285; TIGRFAM: bacterial surface protein 26-residue repeat
YP_005475149.1	PFAM: Phage integrase family
YP_005475150.1	PFAM: UvrD/REP helicase
YP_005475151.1	PFAM: Transposase, Mutator family
YP_005475153.1	PFAM: Transposase, Mutator family
YP_005475154.1	PFAM: DEAD/DEAH box helicase
YP_005475155.1	PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; BadF/BadG/BcrA/BcrD ATPase family; CoA enzyme activase uncharacterised domain (DUF2229); TIGRFAM: CoA-substrate-specific enzyme activase, putative
YP_005475156.1	PFAM: Uncharacterized ACR, COG1678
YP_005475158.1	PFAM: Ketopantoate reductase PanE/ApbA
YP_005475161.1	PFAM: Aldo/keto reductase family
YP_005475162.1	PFAM: Bacterial regulatory proteins, gntR family; family
YP_005475163.1	PFAM: Bacterial extracellular solute-binding protein
YP_005475164.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005475165.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005475166.1	PFAM: Glycosyl hydrolases family 43
YP_005475167.1	PFAM: Methyltransferase domain
YP_005475168.1	PFAM: Nuclease-related domain
YP_005475170.1	PFAM: Acetyltransferase (GNAT) family
YP_005475173.1	manually curated
YP_005475174.1	PFAM: short chain dehydrogenase
YP_005475175.1	PFAM: Transposase, Mutator family
YP_005475176.1	PFAM: Transposase, Mutator family
YP_005475181.1	PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: integron integrase
YP_005475182.1	PFAM: EamA-like transporter family
YP_005475183.1	PFAM: short chain dehydrogenase
YP_005475184.1	PFAM: tRNA synthetases class I (M); Putative tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; methionyl-tRNA synthetase
YP_005475185.1	PFAM: FemAB family
YP_005475186.1	PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase
YP_005475190.1	PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA)
YP_005475191.1	PFAM: Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase
YP_005475192.1	PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase
YP_005475193.1	PFAM: Trans-2-enoyl-CoA reductase catalytic region; NAD(P)H binding domain of trans-2-enoyl-CoA reductase; Enoyl reductase FAD binding domain
YP_005475194.1	PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase
YP_005475195.1	TIGRFAM: ribonuclease Z
YP_005475196.1	PFAM: ABC transporter
YP_005475198.1	PFAM: ABC-type uncharacterized transport system; TIGRFAM: gliding-associated putative ABC transporter substrate-binding component GldG
YP_005475201.1	PFAM: Protein of unknown function DUF115
YP_005475202.1	PFAM: Protein of unknown function DUF115
YP_005475205.1	PFAM: Septum formation initiator
YP_005475206.1	PFAM: Peptidase family U32
YP_005475207.1	PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase
YP_005475208.1	PFAM: D-alanyl-D-alanine carboxypeptidase
YP_005475209.1	PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La
YP_005475210.1	PFAM: Recombination protein O C terminal; Recombination protein O N terminal; TIGRFAM: DNA repair protein RecO
YP_005475212.1	PFAM: Glycosyl transferase family, a/b domain; Pyrimidine nucleoside phosphorylase C-terminal domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: pyrimidine-nucleoside phosphorylase; manually curated
YP_005475213.1	PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ
YP_005475214.1	PFAM: Peptidase family M23
YP_005475215.1	PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21
YP_005475219.1	PFAM: Restriction endonuclease; Tetratricopeptide repeat
YP_005475220.1	PFAM: Tetratricopeptide repeat
YP_005475221.1	PFAM: Tetratricopeptide repeat
YP_005475222.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; MutL C terminal dimerisation domain; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL
YP_005475223.1	PFAM: FecR protein
YP_005475226.1	PFAM: Protein of unknown function (DUF503)
YP_005475227.1	PFAM: Late competence development protein ComFB
YP_005475230.1	PFAM: Peptidase C26
YP_005475231.1	PFAM: ATP-grasp domain; manually curated
YP_005475232.1	PFAM: Caspase domain
YP_005475234.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; manually curated
YP_005475235.1	PFAM: NUDIX domain
YP_005475240.1	PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd)
YP_005475241.1	PFAM: GAF domain; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase
YP_005475242.1	PFAM: Putative methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase
YP_005475243.1	PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain
YP_005475244.1	PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain
YP_005475245.1	PFAM: Sodium/calcium exchanger protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger related-protein
YP_005475246.1	PFAM: Putative RNA methylase family UPF0020; THUMP domain
YP_005475247.1	PFAM: Aminopeptidase I zinc metalloprotease (M18)
YP_005475248.1	PFAM: Acyl-ACP thioesterase
YP_005475250.1	PFAM: Uncharacterized ACR, YhhQ family COG1738; TIGRFAM: conserved hypothetical integral membrane protein
YP_005475251.1	PFAM: ROK family
YP_005475254.1	PFAM: Poly A polymerase head domain
YP_005475255.1	PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region
YP_005475256.1	PFAM: Thiamin pyrophosphokinase, vitamin B1 binding domain; Thiamin pyrophosphokinase, catalytic domain; TIGRFAM: thiamine pyrophosphokinase
YP_005475258.1	PFAM: SPFH domain / Band 7 family
YP_005475260.1	PFAM: Chorismate mutase type I; TIGRFAM: monofunctional chorismate mutase, gram positive type, clade 1
YP_005475261.1	PFAM: Metallopeptidase family M24
YP_005475262.1	PFAM: Uncharacterised protein family (UPF0153)
YP_005475265.1	PFAM: OmpA family
YP_005475266.1	PFAM: Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; DnaB-helicase binding domain of primase; TIGRFAM: DNA primase, catalytic core
YP_005475267.1	PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 factor, region 1.1; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain
YP_005475268.1	PFAM: Putative zinc ribbon domain
YP_005475269.1	PFAM: Tetratricopeptide repeat
YP_005475270.1	PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family
YP_005475271.1	PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC
YP_005475272.1	PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD
YP_005475273.1	PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2
YP_005475274.1	PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA
YP_005475275.1	PFAM: Transposase, Mutator family
YP_005475278.1	PFAM: Adenylate and Guanylate cyclase catalytic domain; CHASE2 domain
YP_005475280.1	PFAM: GAF domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain
YP_005475281.1	PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1
YP_005475282.1	PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase
YP_005475283.1	PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase
YP_005475284.1	PFAM: Putative transcriptional regulators (Ypuh-like); TIGRFAM: segregation and condensation protein B
YP_005475285.1	PFAM: ScpA/B protein
YP_005475286.1	PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
YP_005475287.1	PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA
YP_005475288.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase
YP_005475289.1	PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase
YP_005475292.1	PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase
YP_005475294.1	PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA
YP_005475295.1	PFAM: PBS lyase HEAT-like repeat
YP_005475296.1	PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN
YP_005475297.1	PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming
YP_005475298.1	PFAM: Predicted permease YjgP/YjgQ family
YP_005475299.1	PFAM: Predicted permease YjgP/YjgQ family
YP_005475300.1	PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut)
YP_005475301.1	PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; Polyribonucleotide nucleotidyltransferase, RNA binding domain; TIGRFAM: polyribonucleotide nucleotidyltransferase
YP_005475302.1	PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle
YP_005475303.1	PFAM: FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase
YP_005475304.1	PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase
YP_005475305.1	PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A
YP_005475306.1	PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2
YP_005475307.1	PFAM: NusA N-terminal domain; TIGRFAM: transcription termination factor NusA
YP_005475308.1	PFAM: Uncharacterised BCR, YhbC family COG0779
YP_005475309.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein
YP_005475310.1	PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS
YP_005475311.1	PFAM: Outer membrane protein (OmpH-like)
YP_005475312.1	PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein
YP_005475313.1	PFAM: Family of unknown function (DUF490)
YP_005475314.1	PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase
YP_005475316.1	PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase
YP_005475317.1	PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit
YP_005475318.1	PFAM: RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit
YP_005475319.1	PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC
YP_005475320.1	PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family
YP_005475321.1	PFAM: Peptidase S26
YP_005475322.1	PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type
YP_005475323.1	PFAM: Formylglycine-generating sulfatase enzyme; PEGA domain
YP_005475324.1	PFAM: SmpB protein; TIGRFAM: SsrA-binding protein
YP_005475325.1	PFAM: Inositol monophosphatase family; TIGRFAM: histidinol-phosphate phosphatase HisN, inositol monophosphatase family
YP_005475326.1	PFAM: Phage integrase family
YP_005475342.1	PFAM: Phage capsid family; TIGRFAM: phage major capsid protein, HK97 family
YP_005475343.1	PFAM: Caudovirus prohead protease; TIGRFAM: phage prohead protease, HK97 family
YP_005475344.1	PFAM: Phage portal protein; TIGRFAM: phage portal protein, HK97 family
YP_005475345.1	PFAM: Phage Terminase
YP_005475353.1	PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb)
YP_005475358.1	TIGRFAM: DNA binding domain, excisionase family
YP_005475362.1	PFAM: BRO family, N-terminal domain; Phage antirepressor protein KilAC domain
YP_005475368.1	PFAM: Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; peptide chain release factor 3
YP_005475369.1	PFAM: Na+/H+ antiporter family
YP_005475370.1	PFAM: L-lactate permease; TIGRFAM: L-lactate transport
YP_005475372.1	PFAM: Protein of unknown function, DUF479
YP_005475373.1	PFAM: GMP synthase C terminal domain; Glutamine amidotransferase class-I; Asparagine synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit
YP_005475374.1	PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase
YP_005475375.1	PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase
YP_005475376.1	PFAM: Lyase
YP_005475378.1	PFAM: Sporulation related domain
YP_005475381.1	PFAM: AICARFT/IMPCHase bienzyme
YP_005475382.1	PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain
YP_005475383.1	PFAM: Uncharacterized ACR, COG1469
YP_005475384.1	PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
YP_005475387.1	PFAM: Phosphoribosyl transferase domain
YP_005475388.1	PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family
YP_005475389.1	PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I
YP_005475391.1	PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB
YP_005475392.1	PFAM: SurA N-terminal domain; PPIC-type PPIASE domain
YP_005475393.1	PFAM: DnaJ domain
YP_005475395.1	PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit
YP_005475396.1	PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase
YP_005475397.1	PFAM: Phosphoglycerate kinase
YP_005475398.1	PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I
YP_005475399.1	PFAM: Coatomer epsilon subunit
YP_005475400.1	PFAM: CBS domain; Transporter associated domain; manually curated
YP_005475401.1	PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family
YP_005475402.1	PFAM: PhoH-like protein
YP_005475404.1	PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit
YP_005475406.1	PFAM: ATP synthase subunit C
YP_005475407.1	PFAM: V-type ATPase 116kDa subunit family
YP_005475408.1	PFAM: ATP synthase subunit D; TIGRFAM: H(+)-transporting ATP synthase, vacuolar type, subunit D
YP_005475409.1	PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain
YP_005475410.1	PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta chain, C terminal domain
YP_005475411.1	PFAM: Protein of unknown function (DUF2764)
YP_005475415.1	PFAM: MutS domain V; Smr domain; TIGRFAM: MutS2 family protein
YP_005475416.1	PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A
YP_005475417.1	PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase
YP_005475421.1	PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family
YP_005475423.1	PFAM: SOR/SNZ family; TIGRFAM: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1
YP_005475424.1	PFAM: SNO glutamine amidotransferase family; TIGRFAM: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2
YP_005475425.1	PFAM: Polyprenyl synthetase
YP_005475426.1	PFAM: Squalene/phytoene synthase
YP_005475427.1	PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase
YP_005475428.1	PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type
YP_005475429.1	PFAM: Small subunit of acetolactate synthase; ACT domain; TIGRFAM: acetolactate synthase, small subunit
YP_005475430.1	PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase
YP_005475431.1	PFAM: Lysine-2,3-aminomutase; Radical SAM superfamily; TIGRFAM: KamA family protein
YP_005475432.1	PFAM: Response regulator receiver domain
YP_005475433.1	PFAM: CheC-like family
YP_005475434.1	PFAM: CheW-like domain; CheR methyltransferase, SAM binding domain
YP_005475435.1	PFAM: P2 response regulator binding domain; CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain
YP_005475436.1	PFAM: Flagellar filament outer layer protein Flaa
YP_005475437.1	PFAM: Sporulation and spore germination
YP_005475438.1	PFAM: N-acetylmuramoyl-L-alanine amidase
YP_005475439.1	PFAM: D-ala D-ala ligase C-terminus
YP_005475440.1	PFAM: Methyltransferase domain
YP_005475441.1	PFAM: Cytidylyltransferase
YP_005475444.1	PFAM: Exonuclease VII, large subunit; OB-fold nucleic acid binding domain; TIGRFAM: exodeoxyribonuclease VII, large subunit
YP_005475445.1	PFAM: Exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit
YP_005475446.1	PFAM: Uncharacterized ACR, COG1430
YP_005475448.1	PFAM: PEGA domain
YP_005475451.1	PFAM: HAMP domain; Stage II sporulation protein E (SpoIIE)
YP_005475453.1	PFAM: Uncharacterised protein family (UPF0164)
YP_005475454.1	manually curated
YP_005475455.1	PFAM: Ankyrin repeat
YP_005475456.1	PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; TIGRFAM: DNA-directed DNA polymerase III (polc)
YP_005475457.1	PFAM: RNase3 domain; Double-stranded RNA binding motif; TIGRFAM: ribonuclease III, bacterial
YP_005475458.1	PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein
YP_005475459.1	PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32
YP_005475460.1	PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain
YP_005475461.1	PFAM: yrdC domain; SUA5 domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein
YP_005475462.1	PFAM: Rieske [2Fe-2S] domain
YP_005475463.1	PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD
YP_005475464.1	PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB
YP_005475465.1	PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC
YP_005475466.1	PFAM: Domain of unknown function DUF59
YP_005475467.1	PFAM: Flavodoxin-like fold
YP_005475468.1	PFAM: DUF218 domain
YP_005475469.1	PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain
YP_005475470.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_005475471.1	PFAM: Phospholipase/Carboxylesterase
YP_005475472.1	PFAM: Inorganic H+ pyrophosphatase; TIGRFAM: vacuolar-type H(+)-translocating pyrophosphatase
YP_005475474.1	PFAM: AMP-binding enzyme
YP_005475475.1	PFAM: Y_Y_Y domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Two component regulator propeller
YP_005475476.1	PFAM: SPFH domain / Band 7 family; TIGRFAM: HflK protein
YP_005475477.1	PFAM: SPFH domain / Band 7 family; TIGRFAM: HflC protein
YP_005475478.1	PFAM: D12 class N6 adenine-specific DNA methyltransferase
YP_005475479.1	PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase
YP_005475480.1	PFAM: D-ala D-ala ligase C-terminus; D-ala D-ala ligase N-terminus; TIGRFAM: D-alanine--D-alanine ligase
YP_005475482.1	PFAM: impB/mucB/samB family C-terminal; IMS family HHH motif; impB/mucB/samB family
YP_005475484.1	PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type
YP_005475485.1	PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase
YP_005475486.1	PFAM: Membrane transport protein
YP_005475487.1	PFAM: GAF domain
YP_005475488.1	PFAM: Aminotransferase class I and II; TIGRFAM: LL-diaminopimelate aminotransferase
YP_005475489.1	PFAM: Cyclic nucleotide-binding domain
YP_005475490.1	PFAM: Ion channel; TrkA-N domain
YP_005475491.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain; PAS fold; TIGRFAM: PAS domain S-box
YP_005475492.1	PFAM: Response regulator receiver domain
YP_005475494.1	PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
YP_005475495.1	PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase
YP_005475496.1	PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif
YP_005475497.1	PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase
YP_005475498.1	PFAM: Domain of unknown function DUF20
YP_005475500.1	PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family
YP_005475501.1	PFAM: ParB-like nuclease domain
YP_005475502.1	PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase 1
YP_005475505.1	PFAM: OmpA family
YP_005475506.1	PFAM: short chain dehydrogenase
YP_005475507.1	PFAM: Radical SAM superfamily; TIGRFAM: lipoate synthase
YP_005475508.1	PFAM: Protein of unknown function DUF55
YP_005475509.1	PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain
YP_005475510.1	PFAM: Response regulator receiver domain; His Kinase A (phosphoacceptor) domain
YP_005475512.1	PFAM: short chain dehydrogenase
YP_005475513.1	PFAM: Phosphotransferase enzyme family
YP_005475514.1	PFAM: Iron only hydrogenase large subunit, C-terminal domain; 2Fe-2S iron-sulfur cluster binding domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Iron hydrogenase small subunit; TIGRFAM: [FeFe] hydrogenase, group A
YP_005475515.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain
YP_005475516.1	PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit
YP_005475519.1	PFAM: ABC transporter
YP_005475520.1	PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain
YP_005475522.1	PFAM: Domain of unknown function DUF20
YP_005475523.1	PFAM: Bacterial Ig-like domain (group 2); Formylglycine-generating sulfatase enzyme
YP_005475524.1	PFAM: Phenylalanine and histidine ammonia-lyase; TIGRFAM: phenylalanine ammonia-lyase
YP_005475525.1	PFAM: AMP-binding enzyme; TIGRFAM: 4-coumarate--CoA ligase, photoactive yellow protein activation family
YP_005475527.1	PFAM: FemAB family
YP_005475528.1	PFAM: Protein of unknown function, DUF482
YP_005475529.1	PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase
YP_005475530.1	PFAM: Sodium/hydrogen exchanger family; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
YP_005475531.1	PFAM: Protein of unknown function DUF124; TIGRFAM: TIGR00266 family protein
YP_005475532.1	PFAM: AMP-binding enzyme
YP_005475533.1	PFAM: Low molecular weight phosphotyrosine protein phosphatase
YP_005475534.1	PFAM: EAL domain; Response regulator receiver domain
YP_005475536.1	PFAM: Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A)
YP_005475537.1	PFAM: FecR protein; OmpA family
YP_005475538.1	PFAM: Response regulator receiver domain
YP_005475541.1	PFAM: SMP-30/Gluconolaconase/LRE-like region
YP_005475543.1	PFAM: ABC transporter
YP_005475544.1	PFAM: Aldo/keto reductase family
YP_005475545.1	PFAM: Protein of unknown function (DUF2721)
YP_005475547.1	PFAM: ACT domain; haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; phosphoserine phosphatase SerB
YP_005475548.1	PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease, PfpI family
YP_005475549.1	PFAM: NADH:flavin oxidoreductase / NADH oxidase family
YP_005475552.1	PFAM: Domain of unknown function (DUF3362); Radical SAM superfamily; Radical SAM N-terminal; TIGRFAM: uncharacterized radical SAM protein YgiQ
YP_005475554.1	PFAM: WD domain, G-beta repeat
YP_005475559.1	PFAM: Dual specificity phosphatase, catalytic domain
YP_005475560.1	PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase
YP_005475561.1	PFAM: SAF domain; NeuB family
YP_005475563.1	PFAM: Peptidase family U32
YP_005475564.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase
YP_005475565.1	PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form
YP_005475566.1	PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain
YP_005475567.1	PFAM: Dehydrogenase E1 component; TIGRFAM: pyruvate dehydrogenase E1 component, alpha subunit
YP_005475568.1	PFAM: Pyridoxamine 5'-phosphate oxidase
YP_005475569.1	PFAM: NQR2, RnfD, RnfE family
YP_005475570.1	PFAM: FMN-binding domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit; electron transport complex, RnfABCDGE type, G subunit
YP_005475571.1	PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit
YP_005475572.1	PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit
YP_005475573.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain
YP_005475575.1	PFAM: EAL domain; Response regulator receiver domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain
YP_005475576.1	PFAM: Fumarase C C-terminus; Lyase
YP_005475577.1	PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; manually curated
YP_005475578.1	PFAM: Shikimate kinase; manually curated
YP_005475579.1	PFAM: Rubredoxin
YP_005475584.1	PFAM: ABC transporter
YP_005475585.1	PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth)
YP_005475586.1	PFAM: Rhomboid family
YP_005475587.1	PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1
YP_005475588.1	PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases; protein-(glutamine-N5) methyltransferase, release factor-specific
YP_005475589.1	PFAM: HD domain; TGS domain; Region found in RelA / SpoT proteins; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family
YP_005475590.1	PFAM: Redoxin
YP_005475591.1	PFAM: SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, putative, group 2
YP_005475592.1	PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase
YP_005475593.1	PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase
YP_005475595.1	PFAM: Bacterial type II and III secretion system protein
YP_005475596.1	PFAM: Type II/IV secretion system protein
YP_005475597.1	PFAM: Bacterial type II secretion system protein F domain
YP_005475598.1	PFAM: Bacterial type II secretion system protein G; TIGRFAM: general secretion pathway protein G; prepilin-type N-terminal cleavage/methylation domain
YP_005475605.1	PFAM: Type IV leader peptidase family
YP_005475606.1	PFAM: Metallo-beta-lactamase superfamily
YP_005475607.1	PFAM: Aldo/keto reductase family
YP_005475608.1	PFAM: Cyclic nucleotide-binding domain
YP_005475609.1	PFAM: NMT1/THI5 like
YP_005475610.1	PFAM: ABC transporter
YP_005475611.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005475612.1	PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit
YP_005475616.1	PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase
YP_005475617.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_005475619.1	PFAM: Response regulator receiver domain
YP_005475621.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hpt domain
YP_005475622.1	PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_005475623.1	PFAM: Peptidase family M23; LysM domain
YP_005475624.1	PFAM: PPIC-type PPIASE domain
YP_005475625.1	PFAM: Protein of unknown function DUF115
YP_005475626.1	PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain
YP_005475627.1	PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold
YP_005475628.1	PFAM: Response regulator receiver domain
YP_005475629.1	PFAM: CheB methylesterase; Response regulator receiver domain
YP_005475630.1	PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain
YP_005475631.1	PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain
YP_005475633.1	PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF)
YP_005475635.1	PFAM: Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH
YP_005475636.1	PFAM: PP-loop family; TIGRFAM: tRNA(Ile)-lysidine synthetase, N-terminal domain
YP_005475637.1	PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase
YP_005475638.1	PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form
YP_005475639.1	PFAM: SpoVG
YP_005475640.1	PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein
YP_005475641.1	PFAM: Cell envelope-related transcriptional attenuator domain
YP_005475642.1	PFAM: Cytidylyltransferase; HD domain; TIGRFAM: putative HD superfamily hydrolase of NAD metabolism; nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain
YP_005475643.1	PFAM: GTPase of unknown function; GTP1/OBG; TIGRFAM: Obg family GTPase CgtA
YP_005475644.1	PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27
YP_005475645.1	PFAM: Protein of unknown function (DUF464)
YP_005475646.1	PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21
YP_005475648.1	PFAM: Thioredoxin
YP_005475649.1	PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family
YP_005475650.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthases, NADH/NADPH, small subunit
YP_005475651.1	PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II
YP_005475652.1	PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase
YP_005475653.1	PFAM: Multi-copper polyphenol oxidoreductase laccase
YP_005475655.1	PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein
YP_005475656.1	PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit
YP_005475657.1	PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit
YP_005475658.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase
YP_005475659.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_005475660.1	PFAM: Glycoprotease family; TIGRFAM: putative glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family
YP_005475661.1	PFAM: Divergent polysaccharide deacetylase
YP_005475662.1	PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_005475663.1	PFAM: Rod binding protein
YP_005475664.1	PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: fagellar hook-basal body proteins; flagellar basal-body rod protein FlgG, Gram-negative bacteria
YP_005475665.1	PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body proteins
YP_005475667.1	PFAM: EamA-like transporter family
YP_005475668.1	PFAM: Protein of unknown function (DUF3185)
YP_005475669.1	PFAM: Cyclic nucleotide-binding domain
YP_005475670.1	PFAM: Cyclic nucleotide-binding domain
YP_005475671.1	PFAM: Peptidase family M23
YP_005475673.1	PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family
YP_005475674.1	PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins
YP_005475675.1	PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; Aspartate carbamoyltransferase regulatory chain, metal binding domain; Aspartate carbamoyltransferase regulatory chain, allosteric domain; TIGRFAM: aspartate carbamoyltransferase
YP_005475676.1	PFAM: Borrelia P83/100 protein
YP_005475678.1	PFAM: TRAM domain; tRNA (Uracil-5-)-methyltransferase
YP_005475679.1	PFAM: CoA binding domain; Putative DNA-binding protein N-terminus
YP_005475680.1	PFAM: S4 domain; tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase
YP_005475681.1	PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: glycyl-tRNA synthetase, dimeric type
YP_005475682.1	PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family; manually curated
YP_005475683.1	PFAM: Aminotransferase class I and II
YP_005475685.1	PFAM: HD domain
YP_005475686.1	PFAM: Leucyl/phenylalanyl-tRNA protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA--protein transferase
YP_005475687.1	PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA
YP_005475688.1	PFAM: ATP-dependent Clp protease adaptor protein ClpS
YP_005475690.1	PFAM: Tetratricopeptide repeat
YP_005475691.1	PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE
YP_005475692.1	PFAM: Galactokinase galactose-binding signature; GHMP kinases N terminal domain
YP_005475693.1	PFAM: Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase
YP_005475694.1	PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31
YP_005475695.1	PFAM: Rho termination factor, N-terminal domain; Rho termination factor, RNA-binding domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: transcription termination factor Rho
YP_005475696.1	PFAM: Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA C-terminal domain
YP_005475697.1	PFAM: Protein of unknown function, DUF583
YP_005475698.1	PFAM: Tetratricopeptide repeat
YP_005475699.1	PFAM: Response regulator receiver domain
YP_005475700.1	PFAM: Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase
YP_005475701.1	PFAM: Bacterial DNA-binding protein
YP_005475702.1	PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20
YP_005475704.1	PFAM: ABC transporter; ABC transporter transmembrane region
YP_005475705.1	PFAM: ABC transporter transmembrane region; ABC transporter
YP_005475706.1	PFAM: PSP1 C-terminal conserved region
YP_005475707.1	PFAM: Protein of unknown function (DUF327)
YP_005475708.1	PFAM: Protein of unknown function, DUF583
YP_005475709.1	PFAM: Peptidase family M23
YP_005475710.1	PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family
YP_005475711.1	PFAM: Phosphoribosyl transferase domain; Glutamine amidotransferases class-II; TIGRFAM: amidophosphoribosyltransferase
YP_005475712.1	PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase
YP_005475713.1	PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent
YP_005475714.1	PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase
YP_005475715.1	PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3
YP_005475717.1	PFAM: DnaJ central domain (4 repeats); DnaJ C terminal region; DnaJ domain; TIGRFAM: chaperone protein DnaJ
YP_005475718.1	PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK; Fe-S protein assembly chaperone HscA
YP_005475719.1	PFAM: GrpE
YP_005475721.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
YP_005475722.1	PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain
YP_005475723.1	PFAM: Biopolymer transport protein ExbD/TolR
YP_005475724.1	PFAM: MotA/TolQ/ExbB proton channel family
YP_005475729.1	PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain
YP_005475730.1	PFAM: PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase
YP_005475731.1	PFAM: Sporulation and spore germination
YP_005475732.1	PFAM: FtsJ-like methyltransferase; TIGRFAM: hemolysin TlyA family protein
YP_005475733.1	TIGRFAM: metallophosphoesterase, MG_246/BB_0505 family
YP_005475734.1	PFAM: KH domain; HD domain; Domain of unknown function (DUF3552); TIGRFAM: conserved hypothetical protein YmdA/YtgF; uncharacterized domain HDIG
YP_005475738.1	PFAM: RDD family
YP_005475741.1	PFAM: Heptaprenyl diphosphate synthase component I
YP_005475742.1	PFAM: Maf-like protein; TIGRFAM: MAF protein
YP_005475743.1	PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type
YP_005475744.1	PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts
YP_005475745.1	PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor
YP_005475746.1	PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase
YP_005475747.1	PFAM: Cytidylyltransferase family
YP_005475748.1	PFAM: Peptidase family M50; TIGRFAM: RIP metalloprotease RseP
YP_005475749.1	PFAM: WD domain, G-beta repeat
YP_005475750.1	PFAM: Late competence development protein ComFB
YP_005475751.1	PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase
YP_005475752.1	PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9
YP_005475754.1	PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18
YP_005475755.1	PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb)
YP_005475756.1	PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6
YP_005475758.1	PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase
YP_005475759.1	PFAM: GAF domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: Nif-specific regulatory protein
YP_005475760.1	PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter
YP_005475761.1	PFAM: Nitrogen regulatory protein P-II
YP_005475762.1	PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain
YP_005475763.1	PFAM: Basic membrane protein
YP_005475764.1	PFAM: ABC transporter
YP_005475765.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005475766.1	PFAM: Branched-chain amino acid transport system / permease component
YP_005475767.1	PFAM: Lyase; TIGRFAM: argininosuccinate lyase
YP_005475768.1	PFAM: Domain of unknown function (DUF368)
YP_005475769.1	PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB
YP_005475770.1	PFAM: Rhodanese-like domain
YP_005475772.1	PFAM: ATP cone domain; TIGRFAM: transcriptional regulator NrdR; manually curated
YP_005475773.1	PFAM: HD domain
YP_005475774.1	PFAM: RNA pseudouridylate synthase; S4 domain
YP_005475775.1	PFAM: Protein of unknown function (DUF322)
YP_005475776.1	PFAM: Protein of unknown function (DUF1570)
YP_005475778.1	PFAM: CheD; stimulates methylation of MCP proteins
YP_005475779.1	PFAM: Poly A polymerase head domain; TIGRFAM: poly(A) polymerase
YP_005475780.1	PFAM: chorismate binding enzyme
YP_005475781.1	PFAM: Aminotransferase class IV
YP_005475782.1	PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase
YP_005475783.1	PFAM: Helicase conserved C-terminal domain; Helicase associated domain (HA2); DEAD/DEAH box helicase; Domain of unknown function (DUF1605); TIGRFAM: ATP-dependent helicase HrpA
YP_005475784.1	PFAM: 3-dehydroquinate synthase
YP_005475785.1	PFAM: Bacterial regulatory protein, arsR family
YP_005475786.1	PFAM: Peptidase family M23
YP_005475788.1	PFAM: mce related protein
YP_005475789.1	PFAM: ABC transporter
YP_005475790.1	PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein
YP_005475792.1	PFAM: OsmC-like protein
YP_005475793.1	PFAM: Aldo/keto reductase family
YP_005475794.1	PFAM: Major Facilitator Superfamily
YP_005475795.1	PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: glycogen debranching enzyme GlgX
YP_005475796.1	PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family
YP_005475797.1	PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005475798.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005475799.1	PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase
YP_005475800.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases
YP_005475801.1	PFAM: OmpA family
YP_005475802.1	PFAM: DbpA RNA binding domain
YP_005475803.1	PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain
YP_005475804.1	PFAM: Aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase
YP_005475805.1	PFAM: PUA domain; Amino acid kinase family; TIGRFAM: glutamate 5-kinase
YP_005475807.1	PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase
YP_005475808.1	PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: acetylornithine deacetylase (ArgE)
YP_005475809.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus
YP_005475810.1	PFAM: DNA gyrase/topoisomerase IV, subunit A
YP_005475811.1	PFAM: Response regulator receiver domain
YP_005475812.1	PFAM: Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain
YP_005475814.1	PFAM: Metallo-beta-lactamase superfamily
YP_005475815.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005475817.1	PFAM: tRNA synthetases class I (E and Q), catalytic domain; tRNA synthetases class I (E and Q), anti-codon binding domain; TIGRFAM: glutaminyl-tRNA synthetase
YP_005475818.1	PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
YP_005475820.1	PFAM: Response regulator receiver domain
YP_005475821.1	PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc
YP_005475822.1	PFAM: Dihydrouridine synthase (Dus); TIGRFAM: putative TIM-barrel protein, nifR3 family; manually curated
YP_005475823.1	PFAM: Carbonic anhydrase
YP_005475825.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
YP_005475826.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
YP_005475827.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005475828.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005475829.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005475830.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hpt domain
YP_005475831.1	PFAM: DnaJ domain
YP_005475832.1	PFAM: Hsp70 protein
YP_005475835.1	PFAM: Protein of unknown function (DUF342)
YP_005475836.1	PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family
YP_005475838.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_005475839.1	PFAM: SRP54-type protein, GTPase domain; TIGRFAM: flagellar biosynthetic protein FlhF
YP_005475840.1	PFAM: FHIPEP family; TIGRFAM: flagellar biosynthesis protein FlhA
YP_005475841.1	PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flagellar biosynthetic protein FlhB
YP_005475842.1	PFAM: Bacterial export proteins, family 1; TIGRFAM: flagellar biosynthetic protein FliR
YP_005475843.1	PFAM: Bacterial export proteins, family 3; TIGRFAM: flagellar biosynthetic protein FliQ
YP_005475844.1	PFAM: FliP family; TIGRFAM: flagellar biosynthetic protein FliP
YP_005475845.1	PFAM: Flagellar biosynthesis protein, FliO; TIGRFAM: flagellar biosynthetic protein FliO
YP_005475846.1	PFAM: Surface presentation of antigens (SPOA); TIGRFAM: flagellar motor switch protein FliN
YP_005475847.1	PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM
YP_005475848.1	PFAM: Flagellar basal body-associated protein FliL
YP_005475849.1	PFAM: OmpA family
YP_005475850.1	PFAM: MotA/TolQ/ExbB proton channel family
YP_005475851.1	PFAM: Flagellar protein (FlbD)
YP_005475852.1	PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); Flagellar basal body protein FlaE; TIGRFAM: flagellar hook protein FlgE, epsilon proteobacterial; fagellar hook-basal body proteins
YP_005475853.1	PFAM: Flagellar hook capping protein
YP_005475854.1	PFAM: Flagellar hook-length control protein FliK
YP_005475856.1	PFAM: Flagellar FliJ protein; TIGRFAM: flagellar export protein FliJ
YP_005475857.1	PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family
YP_005475858.1	PFAM: Flagellar assembly protein FliH
YP_005475859.1	PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG
YP_005475860.1	PFAM: Secretory protein of YscJ/FliF family; Flagellar M-ring protein C-terminal; TIGRFAM: flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF)
YP_005475861.1	PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE
YP_005475862.1	PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC
YP_005475863.1	PFAM: Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgB
YP_005475864.1	PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; AAA domain (dynein-related subfamily); TIGRFAM: ATP-dependent protease HslVU, ATPase subunit
YP_005475865.1	PFAM: Proteasome subunit; TIGRFAM: ATP-dependent protease HslVU, peptidase subunit
YP_005475866.1	PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerC
YP_005475867.1	PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA
YP_005475870.1	PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerD
YP_005475871.1	PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ
YP_005475872.1	PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA
YP_005475873.1	PFAM: POTRA domain, FtsQ-type
YP_005475874.1	PFAM: Cell cycle protein; TIGRFAM: cell division protein FtsW
YP_005475875.1	PFAM: Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1; Glycosyl transferase family 4; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase
YP_005475876.1	PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
YP_005475878.1	PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW
YP_005475879.1	PFAM: MraZ protein; TIGRFAM: mraZ protein; manually curated
YP_005475880.1	PFAM: Domain of unknown function (DUF1957); Glycosyl hydrolase family 57
YP_005475885.1	PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN
YP_005475886.1	PFAM: ATP-NAD kinase
YP_005475887.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family
YP_005475888.1	PFAM: CheW-like domain
YP_005475889.1	PFAM: FAD dependent oxidoreductase
YP_005475890.1	PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase
YP_005475891.1	PFAM: Aminotransferase class I and II
YP_005475893.1	PFAM: Patatin-like phospholipase
YP_005475894.1	PFAM: Radical SAM superfamily; B12 binding domain
YP_005475896.1	PFAM: Adenylate kinase, active site lid; Adenylate kinase; TIGRFAM: adenylate kinases
YP_005475897.1	PFAM: Tetratricopeptide repeat
YP_005475901.1	PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold
YP_005475902.1	PFAM: Pyruvate phosphate dikinase, PEP/pyruvate binding domain
YP_005475903.1	PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
YP_005475904.1	PFAM: Sodium/glutamate symporter; TIGRFAM: sodium--glutamate symport carrier (gltS)
YP_005475905.1	PFAM: ABC transporter transmembrane region; ABC transporter
YP_005475908.1	PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A
YP_005475911.1	PFAM: 3'-5' exonuclease; HRDC domain
YP_005475912.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005475913.1	PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005475914.1	PFAM: Glycosyl hydrolase family 1; TIGRFAM: beta-galactosidase
YP_005475915.1	PFAM: ROK family
YP_005475918.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005475919.1	PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005475920.1	PFAM: IMP dehydrogenase / GMP reductase domain; TIGRFAM: guanosine monophosphate reductase, eukaryotic
YP_005475921.1	PFAM: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
YP_005475923.1	PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; PAS fold; TIGRFAM: PAS domain S-box
YP_005475925.1	PFAM: Helix-turn-helix
YP_005475927.1	PFAM: Phosphoribulokinase / Uridine kinase family
YP_005475928.1	PFAM: Carbon-nitrogen hydrolase
YP_005475929.1	PFAM: Methylenetetrahydrofolate reductase
YP_005475930.1	PFAM: Uncharacterised BCR, COG1937
YP_005475931.1	PFAM: Heavy-metal-associated domain
YP_005475932.1	PFAM: Patatin-like phospholipase; manually curated
YP_005475934.1	PFAM: Acetyltransferase (GNAT) family
YP_005475935.1	PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC
YP_005475936.1	PFAM: Branched-chain amino acid transport protein (AzlD)
YP_005475937.1	PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005475939.1	PFAM: Shikimate kinase; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family
YP_005475940.1	PFAM: ABC transporter; ABC transporter transmembrane region
YP_005475941.1	PFAM: ABC transporter transmembrane region; ABC transporter
YP_005475944.1	PFAM: Protein of unknown function, DUF583
YP_005475945.1	PFAM: Prephenate dehydrogenase
YP_005475946.1	PFAM: Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate acetyltransferase
YP_005475947.1	PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase
YP_005475948.1	PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase
YP_005475949.1	PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase
YP_005475950.1	PFAM: Competence protein; TIGRFAM: ComEC/Rec2-related protein
YP_005475952.1	PFAM: PilZ domain
YP_005475953.1	PFAM: CAAX amino terminal protease family
YP_005475954.1	PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit
YP_005475955.1	PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit
YP_005475956.1	PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit
YP_005475957.1	PFAM: Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein
YP_005475958.1	PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ
YP_005475959.1	PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; NAD-dependent DNA ligase C4 zinc finger domain; TIGRFAM: DNA ligase, NAD-dependent
YP_005475960.1	PFAM: Sporulation related domain
YP_005475962.1	PFAM: Transcription termination factor nusG
YP_005475963.1	PFAM: Polysaccharide biosynthesis protein
YP_005475964.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family
YP_005475965.1	PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
YP_005475966.1	PFAM: [2Fe-2S] binding domain
YP_005475967.1	PFAM: FAD binding domain in molybdopterin dehydrogenase
YP_005475968.1	PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc)
YP_005475969.1	PFAM: YGGT family
YP_005475970.1	PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG
YP_005475971.1	PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family
YP_005475973.1	PFAM: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase
YP_005475974.1	PFAM: Imidazoleglycerol-phosphate dehydratase
YP_005475976.1	PFAM: Bacterial transcriptional activator domain
YP_005475977.1	PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; His Kinase A (phosphoacceptor) domain; Bacterial extracellular solute-binding proteins, family 3; PAS fold; TIGRFAM: PAS domain S-box
YP_005475978.1	PFAM: Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase
YP_005475979.1	PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
YP_005475980.1	PFAM: Bacterial regulatory protein, arsR family
YP_005475981.1	PFAM: Sodium:neurotransmitter symporter family
YP_005475982.1	PFAM: Bacterial extracellular solute-binding protein, family 7
YP_005475983.1	PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component
YP_005475984.1	PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit
YP_005475985.1	PFAM: Aminotransferase class I and II
YP_005475986.1	PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: PAS domain S-box
YP_005475987.1	PFAM: Cyclic nucleotide-binding domain
YP_005475989.1	PFAM: Periplasmic binding protein
YP_005475990.1	PFAM: FecCD transport family
YP_005475991.1	PFAM: ABC transporter
YP_005475993.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005475994.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005475995.1	PFAM: Bacterial extracellular solute-binding protein
YP_005475996.1	PFAM: Bacterial regulatory proteins, lacI family
YP_005475997.1	PFAM: Transglycosylase
YP_005475998.1	PFAM: Surface antigen
YP_005475999.1	PFAM: Family of unknown function (DUF490)
YP_005476002.1	PFAM: Major Facilitator Superfamily; PBS lyase HEAT-like repeat
YP_005476003.1	PFAM: CDP-alcohol phosphatidyltransferase
YP_005476004.1	PFAM: Maltose acetyltransferase; Bacterial transferase hexapeptide (three repeats)
YP_005476005.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
YP_005476008.1	PFAM: MarR family
YP_005476009.1	PFAM: Protein of unknown function (DUF1349)
YP_005476011.1	PFAM: haloacid dehalogenase-like hydrolase
YP_005476012.1	PFAM: Alpha amylase, catalytic domain; Domain of unknown function (DUF1939)
YP_005476013.1	PFAM: Domain of unknown function DUF21
YP_005476014.1	PFAM: Transposase, Mutator family
YP_005476017.1	PFAM: SEC-C motif
YP_005476019.1	PFAM: Phage derived protein Gp49-like (DUF891)
YP_005476020.1	PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005476021.1	PFAM: Prismane/CO dehydrogenase family; TIGRFAM: hydroxylamine reductase
YP_005476022.1	PFAM: short chain dehydrogenase
YP_005476023.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III
YP_005476024.1	PFAM: FabA-like domain
YP_005476025.1	PFAM: FabA-like domain
YP_005476026.1	PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain
YP_005476027.1	PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein
YP_005476028.1	PFAM: Acyltransferase
YP_005476029.1	PFAM: 4'-phosphopantetheinyl transferase superfamily
YP_005476030.1	PFAM: Cobalamin-independent synthase, Catalytic domain; Cobalamin-independent synthase, N-terminal domain; TIGRFAM: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
YP_005476031.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005476032.1	PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: L-lactate dehydrogenase
YP_005476033.1	PFAM: Cobalt transport protein
YP_005476034.1	PFAM: ABC transporter
YP_005476035.1	PFAM: ABC-type cobalt transport system, permease component
YP_005476036.1	PFAM: YKOF-related Family
YP_005476037.1	PFAM: Protein of unknown function (DUF454)
YP_005476038.1	PFAM: Amino acid permease
YP_005476039.1	PFAM: Glutamine amidotransferase class-I
YP_005476041.1	PFAM: Methyltransferase domain
YP_005476042.1	PFAM: Radical SAM superfamily; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein
YP_005476043.1	PFAM: ATP cone domain; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase
YP_005476044.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_005476045.1	PFAM: Response regulator receiver domain
YP_005476046.1	PFAM: Protein of unknown function (DUF342)
YP_005476047.1	PFAM: Sulfate transporter family; Cyclic nucleotide-binding domain; STAS domain
YP_005476048.1	PFAM: Rhodanese-like domain
YP_005476051.1	PFAM: Predicted permease
YP_005476052.1	PFAM: ABC transporter
YP_005476053.1	TIGRFAM: RND family efflux transporter, MFP subunit
YP_005476054.1	PFAM: Outer membrane efflux protein
YP_005476055.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_005476056.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005476059.1	PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005476060.1	PFAM: Na+/H+ ion antiporter subunit
YP_005476061.1	PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF)
YP_005476062.1	PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit
YP_005476064.1	PFAM: Domain related to MnhB subunit of Na+/H+ antiporter
YP_005476065.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
YP_005476066.1	PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains
YP_005476067.1	PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains
YP_005476068.1	PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
YP_005476069.1	PFAM: AraC-like ligand binding domain
YP_005476070.1	PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase
YP_005476071.1	PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain
YP_005476072.1	PFAM: Spermine/spermidine synthase
YP_005476073.1	PFAM: Protein of unknown function (DUF2892)
YP_005476074.1	PFAM: Mechanosensitive ion channel
YP_005476075.1	PFAM: UvrD/REP helicase
YP_005476076.1	PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain
YP_005476077.1	PFAM: Biopolymer transport protein ExbD/TolR
YP_005476078.1	PFAM: Biopolymer transport protein ExbD/TolR
YP_005476079.1	PFAM: MotA/TolQ/ExbB proton channel family
YP_005476081.1	PFAM: TonB-dependent Receptor Plug Domain
YP_005476082.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_005476083.1	PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit
YP_005476084.1	PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit
YP_005476085.1	PFAM: Patatin-like phospholipase
YP_005476086.1	PFAM: Alpha amylase, catalytic domain; Domain of unknown function (DUF2223)
YP_005476087.1	PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: pullulanase, type I
YP_005476090.1	PFAM: Alpha amylase, catalytic domain
YP_005476093.1	PFAM: Carbamoyltransferase
YP_005476095.1	PFAM: Alpha amylase, C-terminal all-beta domain; Alpha amylase, catalytic domain
YP_005476096.1	PFAM: Alpha amylase, catalytic domain; Domain of unknown function (DUF1939)
YP_005476099.1	PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
YP_005476100.1	PFAM: Stage II sporulation protein E (SpoIIE)
YP_005476101.1	PFAM: ABC transporter; TOBE domain
YP_005476102.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005476103.1	PFAM: Bacterial extracellular solute-binding protein
YP_005476104.1	PFAM: Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain
YP_005476105.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain
YP_005476106.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit
YP_005476107.1	PFAM: ABC 3 transport family
YP_005476108.1	PFAM: ABC transporter
YP_005476109.1	PFAM: Periplasmic solute binding protein family
YP_005476111.1	PFAM: Protein of unknown function (DUF456)
YP_005476112.1	PFAM: 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; 7TMR-DISM extracellular 2; His Kinase A (phosphoacceptor) domain
YP_005476113.1	PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain
YP_005476115.1	PFAM: Response regulator receiver domain
YP_005476116.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain
YP_005476117.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005476118.1	PFAM: Acetyltransferase (GNAT) family
YP_005476119.1	PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase
YP_005476120.1	PFAM: ABC transporter
YP_005476121.1	PFAM: ABC-2 type transporter; TIGRFAM: ABC-2 type transporter, NodJ family
YP_005476122.1	PFAM: GGDEF domain; Response regulator receiver domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005476123.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005476127.1	PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme
YP_005476128.1	PFAM: short chain dehydrogenase
YP_005476129.1	PFAM: Protein of Unknown function (DUF2784)
YP_005476130.1	PFAM: Beta-galactosidase trimerisation domain; Beta-galactosidase
YP_005476131.1	PFAM: Antibiotic biosynthesis monooxygenase
YP_005476132.1	PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase
YP_005476133.1	PFAM: Galactokinase galactose-binding signature; GHMP kinases N terminal domain
YP_005476134.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005476135.1	PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase, yeast type
YP_005476137.1	PFAM: PHP domain
YP_005476138.1	PFAM: DRTGG domain
YP_005476139.1	PFAM: CBS domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005476140.1	PFAM: DRTGG domain
YP_005476142.1	PFAM: ABC transporter; Binding-protein-dependent transport system inner membrane component
YP_005476143.1	PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit
YP_005476144.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005476146.1	PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; 4Fe-4S binding domain; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain
YP_005476147.1	PFAM: Iron only hydrogenase large subunit, C-terminal domain; 2Fe-2S iron-sulfur cluster binding domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Iron hydrogenase small subunit; TIGRFAM: [FeFe] hydrogenase, group A
YP_005476148.1	PFAM: META domain
YP_005476149.1	PFAM: Aldo/keto reductase family
YP_005476150.1	PFAM: Region found in RelA / SpoT proteins
YP_005476152.1	PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative
YP_005476155.1	PFAM: ATP cone domain; Ribonucleotide reductase, barrel domain
YP_005476156.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005476158.1	PFAM: Radical SAM superfamily; TIGRFAM: pyruvate formate-lyase 1-activating enzyme
YP_005476159.1	PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: formate acetyltransferase 1
YP_005476160.1	PFAM: Fructosamine kinase
YP_005476161.1	PFAM: Low molecular weight phosphotyrosine protein phosphatase
YP_005476163.1	PFAM: Response regulator receiver domain
YP_005476164.1	PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase, putative
YP_005476165.1	PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: TIGR00255 family protein
YP_005476166.1	PFAM: Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate--alanine ligase
YP_005476167.1	PFAM: Domain of unknown function (DUF368)
YP_005476168.1	PFAM: Radical SAM superfamily; TIGRFAM: 23S rRNA m2A2503 methyltransferase
YP_005476169.1	PFAM: Glucose / Sorbosone dehydrogenase
YP_005476170.1	PFAM: Domain of unknown function (DUF374)
YP_005476171.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005476172.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005476173.1	PFAM: Major Facilitator Superfamily
YP_005476174.1	PFAM: Phosphofructokinase
YP_005476176.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: putative bacillithiol system oxidoreductase, YpdA family
YP_005476177.1	PFAM: Thermophilic metalloprotease (M29)
YP_005476178.1	PFAM: SurA N-terminal domain
YP_005476179.1	PFAM: ABC transporter; TIGRFAM: sulfate ABC transporter, ATP-binding protein
YP_005476180.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: sulfate ABC transporter, permease protein CysW; sulfate ABC transporter, permease protein
YP_005476181.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: sulfate ABC transporter, permease protein; sulfate ABC transporter, permease protein CysT
YP_005476182.1	PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: sulfate/thiosulfate-binding protein
YP_005476183.1	PFAM: Bacterial SH3 domain
YP_005476184.1	PFAM: Peptidase family M48
YP_005476185.1	PFAM: Adenylate and Guanylate cyclase catalytic domain; CHASE2 domain
YP_005476186.1	PFAM: Uncharacterized conserved protein (DUF2196); TIGRFAM: conserved hypothetical protein
YP_005476187.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases; cysteine synthase B
YP_005476188.1	PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: O-succinylhomoserine sulfhydrylase
YP_005476189.1	PFAM: Aldehyde dehydrogenase family; Iron-containing alcohol dehydrogenase
YP_005476192.1	PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX; small GTP-binding protein domain
YP_005476195.1	PFAM: 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain; 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase
YP_005476197.1	PFAM: Aminotransferase class I and II
YP_005476199.1	PFAM: ABC transporter; TOBE domain
YP_005476200.1	PFAM: FecR protein
YP_005476203.1	PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain; ACT domain
YP_005476204.1	PFAM: Protein of unknown function (DUF554)
YP_005476205.1	PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005476206.1	PFAM: Receptor family ligand binding region
YP_005476207.1	PFAM: Phosphoribosyl-AMP cyclohydrolase
YP_005476208.1	PFAM: Oxidoreductase FAD-binding domain; Ferric reductase like transmembrane component; Oxidoreductase NAD-binding domain
YP_005476209.1	PFAM: Amidohydrolase family; manually curated
YP_005476210.1	manually curated
YP_005476211.1	PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family
YP_005476212.1	PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit
YP_005476213.1	PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
YP_005476215.1	PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: isoleucyl-tRNA synthetase
YP_005476218.1	PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase
YP_005476219.1	PFAM: Alpha amylase, catalytic domain
YP_005476221.1	PFAM: Cyclic nucleotide-binding domain
YP_005476222.1	PFAM: Serine hydroxymethyltransferase
YP_005476223.1	PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005476224.1	PFAM: IPT/TIG domain; Transglutaminase-like superfamily
YP_005476227.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_005476228.1	PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase
YP_005476230.1	PFAM: Glycosyl hydrolase family 65 central catalytic domain; Glycosyl hydrolase family 65, N-terminal domain
YP_005476231.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005476232.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005476233.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005476234.1	PFAM: Bacterial extracellular solute-binding protein
YP_005476235.1	PFAM: Acetokinase family; TIGRFAM: acetate kinase
YP_005476236.1	PFAM: DJ-1/PfpI family; TIGRFAM: DJ-1 family protein
YP_005476237.1	PFAM: Mechanosensitive ion channel
YP_005476239.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_005476240.1	PFAM: Dehydrogenase E1 component; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; Transketolase, C-terminal domain; Biotin-requiring enzyme; Transketolase, pyrimidine binding domain; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III
YP_005476242.1	PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases
YP_005476244.1	PFAM: Uncharacterized protein family UPF0057
YP_005476248.1	PFAM: Glycerophosphoryl diester phosphodiesterase family
YP_005476249.1	PFAM: Bacterial regulatory proteins, luxR family
YP_005476252.1	PFAM: Bacterial extracellular solute-binding protein
YP_005476253.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005476254.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005476255.1	PFAM: Acetyltransferase (GNAT) family
YP_005476256.1	PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family
YP_005476257.1	PFAM: Alpha amylase, catalytic domain
YP_005476258.1	PFAM: Alpha amylase, catalytic domain
YP_005476259.1	PFAM: Starch binding domain; Alpha amylase, catalytic domain; Domain of unknown function (DUF1939)
YP_005476260.1	PFAM: Acetyltransferase (GNAT) family
YP_005476261.1	PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain
YP_005476262.1	PFAM: EAL domain
YP_005476263.1	PFAM: YceG-like family; TIGRFAM: conserved hypothetical protein, YceG family
YP_005476265.1	PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA
YP_005476266.1	PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1
YP_005476267.1	PFAM: Smr domain
YP_005476269.1	PFAM: Tetratricopeptide repeat
YP_005476270.1	PFAM: von Willebrand factor type A domain
YP_005476271.1	PFAM: von Willebrand factor type A domain
YP_005476273.1	PFAM: Protein of unknown function DUF58
YP_005476274.1	PFAM: ATPase family associated with various cellular activities (AAA)
YP_005476275.1	PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase
YP_005476276.1	PFAM: Protein of unknown function (DUF1007)
YP_005476280.1	PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing)
YP_005476282.1	PFAM: Thioredoxin; TIGRFAM: thioredoxin
YP_005476283.1	PFAM: Aldehyde dehydrogenase family
YP_005476284.1	PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit
YP_005476285.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit
YP_005476286.1	PFAM: Indole-3-glycerol phosphate synthase; N-(5'phosphoribosyl)anthranilate (PRA) isomerase
YP_005476287.1	PFAM: Glycosyl transferase family, a/b domain; Glutamine amidotransferase class-I; Glycosyl transferase family, helical bundle domain; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase; anthranilate phosphoribosyltransferase
YP_005476288.1	PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: anthranilate synthase component I, non-proteobacterial lineages
YP_005476289.1	PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb)
YP_005476290.1	PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial
YP_005476292.1	PFAM: Stress responsive A/B Barrel Domain
YP_005476293.1	PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type
YP_005476295.1	PFAM: ABC transporter
YP_005476296.1	PFAM: Uncharacterised protein family (UPF0014); TIGRFAM: TIGR00245 family protein
YP_005476297.1	PFAM: Peptidase M16C associated; Peptidase M16 inactive domain; Insulinase (Peptidase family M16)
YP_005476298.1	PFAM: Phosphorylase superfamily; TIGRFAM: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
YP_005476299.1	PFAM: Aminotransferase class I and II
YP_005476300.1	PFAM: tRNA synthetases class II (D, K and N)
YP_005476301.1	PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P
YP_005476302.1	PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein
YP_005476303.1	PFAM: Mechanosensitive ion channel
YP_005476304.1	PFAM: Phosphoribosyl transferase domain; Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 2; orotate phosphoribosyltransferase
YP_005476305.1	PFAM: Sir2 family
YP_005476306.1	PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family
YP_005476307.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005476308.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005476309.1	PFAM: Bacterial extracellular solute-binding protein
YP_005476311.1	PFAM: FtsH Extracellular; Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH
YP_005476313.1	PFAM: Chromate transporter
YP_005476314.1	PFAM: Chromate transporter
YP_005476315.1	PFAM: MgtE intracellular N domain; Divalent cation transporter; CBS domain; TIGRFAM: Mg2+ transporter (mgtE)
YP_005476316.1	PFAM: HAMP domain; Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005476317.1	PFAM: Alpha amylase, catalytic domain
YP_005476318.1	PFAM: MatE; TIGRFAM: putative efflux protein, MATE family
YP_005476319.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005476320.1	PFAM: Outer membrane efflux protein
YP_005476321.1	PFAM: AcrB/AcrD/AcrF family
YP_005476322.1	TIGRFAM: RND family efflux transporter, MFP subunit
YP_005476323.1	PFAM: Putative RNA methylase family UPF0020
YP_005476324.1	PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16)
YP_005476325.1	PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases
YP_005476326.1	PFAM: AcrB/AcrD/AcrF family
YP_005476329.1	PFAM: Outer membrane efflux protein
YP_005476330.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB
YP_005476331.1	PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
YP_005476332.1	PFAM: WGR domain
YP_005476334.1	PFAM: Carboxypeptidase Taq (M32) metallopeptidase
YP_005476335.1	PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: threonyl-tRNA synthetase
YP_005476336.1	PFAM: Acetyltransferase (GNAT) family
YP_005476337.1	PFAM: MutS domain V
YP_005476338.1	PFAM: Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); TIGRFAM: glycogen debranching enzyme GlgX
YP_005476340.1	PFAM: Helix-turn-helix
YP_005476342.1	PFAM: ABC transporter; TOBE domain
YP_005476343.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005476344.1	PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: ABC transporter periplasmic binding protein, thiB subfamily
YP_005476345.1	PFAM: Adenylate and Guanylate cyclase catalytic domain; manually curated
YP_005476346.1	PFAM: KaiC; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: DNA repair protein RadA; manually curated
YP_005476348.1	PFAM: Rhodanese-like domain
YP_005476349.1	PFAM: AhpC/TSA family
YP_005476351.1	TIGRFAM: Por secretion system C-terminal sorting domain
YP_005476354.1	PFAM: CotH protein
YP_005476356.1	PFAM: Helicase conserved C-terminal domain; ATP-dependent helicase C-terminal; Helicase associated domain (HA2); DEAD/DEAH box helicase; TIGRFAM: ATP-dependent helicase HrpB
YP_005476357.1	PFAM: Ion transport protein
YP_005476359.1	PFAM: Methyltransferase domain
YP_005476360.1	PFAM: Fatty acid hydroxylase superfamily
YP_005476361.1	PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase
YP_005476363.1	PFAM: N-acetylmuramoyl-L-alanine amidase; Bacterial SH3 domain
YP_005476364.1	PFAM: TatD related DNase
YP_005476365.1	PFAM: ThiF family
YP_005476366.1	PFAM: Cache domain; HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_005476367.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein
YP_005476371.1	PFAM: Thioredoxin; TIGRFAM: thioredoxin
YP_005476372.1	PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain
YP_005476373.1	PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family
YP_005476376.1	PFAM: Prephenate dehydratase; ACT domain; DAHP synthetase I family
YP_005476377.1	PFAM: Transglycosylase SLT domain
YP_005476378.1	PFAM: Macrocin-O-methyltransferase (TylF)
YP_005476379.1	PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_005476380.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005476382.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005476383.1	PFAM: CarD-like/TRCF domain
YP_005476385.1	PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain
YP_005476387.1	TIGRFAM: phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein
YP_005476388.1	PFAM: Cyclic nucleotide-binding domain
YP_005476389.1	PFAM: Predicted membrane protein (DUF2154); Domain of unknown function (DUF1707)
YP_005476391.1	PFAM: tRNA synthetase B5 domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit
YP_005476392.1	PFAM: tRNA synthetases class II core domain (F); TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit
YP_005476393.1	PFAM: Tetratricopeptide repeat
YP_005476394.1	PFAM: Fibronectin type III domain
YP_005476395.1	PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit
YP_005476396.1	PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit
YP_005476397.1	PFAM: LexA DNA binding domain; Peptidase S24-like; TIGRFAM: SOS regulatory protein LexA
YP_005476398.1	PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain
YP_005476399.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_005476401.1	PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family
YP_005476402.1	PFAM: HPr Serine kinase N terminus; HPr Serine kinase C-terminal domain; TIGRFAM: Hpr(Ser) kinase/phosphatase
YP_005476403.1	PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein
YP_005476404.1	PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54 factor, core binding domain; Sigma-54, DNA binding domain; TIGRFAM: RNA polymerase sigma-54 factor
YP_005476405.1	PFAM: ABC transporter
YP_005476407.1	PFAM: Protein of unknown function (DUF1239)
YP_005476408.1	PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase
YP_005476410.1	PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain
YP_005476411.1	PFAM: CheB methylesterase; Response regulator receiver domain
YP_005476412.1	TIGRFAM: metallophosphoesterase, MG_246/BB_0505 family
YP_005476413.1	PFAM: Hsp20/alpha crystallin family
YP_005476414.1	PFAM: MatE; TIGRFAM: putative efflux protein, MATE family
YP_005476415.1	PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005476416.1	PFAM: Sulfite exporter TauE/SafE
YP_005476418.1	PFAM: Predicted periplasmic lipoprotein (DUF2279)
YP_005476419.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_005476420.1	PFAM: Domain of unknown function (DUF389); TIGRFAM: uncharacterized hydrophobic domain; TIGR00341 family protein
YP_005476421.1	PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase
YP_005476422.1	PFAM: Glycerophosphoryl diester phosphodiesterase family
YP_005476423.1	PFAM: YeeE/YedE family (DUF395)
YP_005476424.1	PFAM: YeeE/YedE family (DUF395)
YP_005476425.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: alkyl hydroperoxide reductase, F subunit
YP_005476426.1	PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; TIGRFAM: peroxiredoxin
YP_005476427.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_005476429.1	PFAM: Domain of unknown function DUF302
YP_005476430.1	PFAM: Mechanosensitive ion channel
YP_005476432.1	PFAM: HIT domain
YP_005476433.1	PFAM: Aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase
YP_005476434.1	PFAM: Sugar-specific transcriptional regulator TrmB
YP_005476435.1	PFAM: Citrate synthase
YP_005476436.1	PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type
YP_005476438.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; ACT domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_005476439.1	PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
YP_005476440.1	PFAM: EamA-like transporter family
YP_005476441.1	PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_005476443.1	PFAM: Domain of unknown function (DUF1987)
YP_005476444.1	PFAM: Adenylate and Guanylate cyclase catalytic domain
YP_005476445.1	PFAM: 7TM diverse intracellular signalling; Stage II sporulation protein E (SpoIIE)
YP_005476446.1	PFAM: Sporulation related domain
YP_005476447.1	PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase
YP_005476448.1	PFAM: 5'-3' exonuclease, C-terminal SAM fold; 3'-5' exonuclease; 5'-3' exonuclease, N-terminal resolvase-like domain; DNA polymerase family A; TIGRFAM: DNA polymerase I
YP_005476449.1	PFAM: FlgN protein
YP_005476450.1	PFAM: Flagellar protein FliS; TIGRFAM: flagellar biosynthetic protein FliS
YP_005476451.1	PFAM: Polysaccharide deacetylase
YP_005476453.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_005476454.1	PFAM: PhoH-like protein
YP_005476455.1	PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit
YP_005476457.1	PFAM: Shikimate dehydrogenase substrate binding domain; Type I 3-dehydroquinase; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; 3-dehydroquinate dehydratase, type I
YP_005476459.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
YP_005476460.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
YP_005476461.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005476462.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005476463.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_005476464.1	PFAM: Ftsk gamma domain; FtsK/SpoIIIE family
YP_005476465.1	PFAM: Transglycosylase SLT domain
YP_005476466.1	PFAM: Hsp70 protein
YP_005476467.1	PFAM: Restriction endonuclease
YP_005476468.1	PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
YP_005476469.1	PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A
YP_005476470.1	PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein domain
YP_005476471.1	PFAM: Glycerophosphoryl diester phosphodiesterase family
YP_005476477.1	PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase
YP_005476478.1	PFAM: Peptidase family M20/M25/M40; TIGRFAM: peptidase T
YP_005476479.1	PFAM: Uncharacterized conserved protein (DUF2156)
YP_005476481.1	PFAM: Cobalamin adenosyltransferase; TIGRFAM: ATP:cob(I)alamin adenosyltransferase
YP_005476482.1	PFAM: TraB family; TIGRFAM: pheromone shutdown-related protein TraB
YP_005476483.1	PFAM: DHH family; DHHA1 domain
YP_005476484.1	PFAM: Tetratricopeptide repeat
YP_005476486.1	PFAM: Phosphoglycerate mutase family
YP_005476487.1	PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast
YP_005476488.1	PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase
YP_005476489.1	PFAM: Histidine biosynthesis protein; Phosphoribosyl-ATP pyrophosphohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
YP_005476490.1	PFAM: Amidohydrolase; TIGRFAM: dihydroorotase, homodimeric type
YP_005476491.1	PFAM: Uncharacterised protein family UPF0005
YP_005476493.1	PFAM: HD domain
YP_005476494.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase
YP_005476495.1	PFAM: ACT domain; Amino acid kinase family; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase
YP_005476496.1	PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase
YP_005476497.1	PFAM: DnaJ domain
YP_005476500.1	PFAM: Transcriptional regulatory protein, C terminal
YP_005476501.1	PFAM: PspA/IM30 family
YP_005476502.1	PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_005476503.1	PFAM: short chain dehydrogenase
YP_005476505.1	PFAM: Sigma-54 interaction domain
YP_005476506.1	PFAM: FxsA cytoplasmic membrane protein
YP_005476507.1	PFAM: Glycosyl transferase WecB/TagA/CpsF family; TIGRFAM: bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family
YP_005476508.1	PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family
YP_005476509.1	PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc)
YP_005476510.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_005476511.1	PFAM: Protein of unknown function (DUF342)
YP_005476512.1	PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase
YP_005476513.1	PFAM: Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase
YP_005476514.1	PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28
YP_005476515.1	PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type
YP_005476517.1	PFAM: HD domain; GAF domain
YP_005476518.1	PFAM: NAD(P) transhydrogenase beta subunit
YP_005476520.1	PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: NAD(P) transhydrogenase, alpha subunit
YP_005476521.1	PFAM: MatE; TIGRFAM: putative efflux protein, MATE family
YP_005476522.1	PFAM: Biotin/lipoate A/B protein ligase family
YP_005476523.1	PFAM: Amylo-alpha-1,6-glucosidase
YP_005476524.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005476525.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_005476526.1	PFAM: Bacterial extracellular solute-binding protein
YP_005476527.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_005476528.1	PFAM: Predicted secreted protein (DUF2259)
YP_005476531.1	PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase
YP_005476532.1	PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); Prolyl-tRNA synthetase, C-terminal; TIGRFAM: prolyl-tRNA synthetase, family I
YP_005476534.1	PFAM: Sodium:dicarboxylate symporter family
YP_005476536.1	PFAM: NAD synthase; Carbon-nitrogen hydrolase; TIGRFAM: NAD+ synthetase
YP_005476538.1	PFAM: ApbE family
YP_005476539.1	PFAM: NMT1/THI5 like
YP_005476540.1	PFAM: Protein of unknown function DUF88
YP_005476541.1	PFAM: Integral membrane protein DUF92; TIGRFAM: TIGR00297 family protein
YP_005476542.1	PFAM: CutA1 divalent ion tolerance protein
YP_005476543.1	PFAM: CheW-like domain
YP_005476544.1	PFAM: Thymidylate synthase complementing protein; TIGRFAM: thymidylate synthase, flavin-dependent
YP_005476545.1	PFAM: Bacterial capsule synthesis protein PGA_cap
YP_005476546.1	PFAM: Peptidase family M23
YP_005476547.1	PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1
YP_005476548.1	PFAM: HD domain; Ppx/GppA phosphatase family
YP_005476549.1	PFAM: ROK family
YP_005476550.1	TIGRFAM: nicotinamide-nucleotide adenylyltransferase, NadR type; cytidyltransferase-related domain
YP_005476551.1	PFAM: NfeD-like
YP_005476552.1	PFAM: SPFH domain / Band 7 family
YP_005476553.1	PFAM: SPFH domain / Band 7 family
YP_005476555.1	PFAM: Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain
YP_005476556.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthase (NADPH), homotetrameric
YP_005476557.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain
YP_005476558.1	PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase
YP_005476559.1	PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III
YP_005476560.1	PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase
YP_005476561.1	PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase
YP_005476562.1	PFAM: domain; FAD binding domain
YP_005476563.1	PFAM: Quinolinate synthetase A protein; TIGRFAM: quinolinate synthetase complex, A subunit
YP_005476564.1	PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase
YP_005476567.1	PFAM: Acetyltransferase (GNAT) family; TIGRFAM: diaminobutyrate acetyltransferase
YP_005476568.1	PFAM: Aminotransferase class-III; TIGRFAM: 2,4-diaminobutyrate 4-transaminases; diaminobutyrate--2-oxoglutarate aminotransferase
YP_005476569.1	PFAM: Ectoine synthase
YP_005476570.1	PFAM: Bacterial regulatory proteins, tetR family
YP_005476571.1	PFAM: Outer membrane efflux protein
YP_005476572.1	TIGRFAM: RND family efflux transporter, MFP subunit
YP_005476573.1	PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
YP_005476576.1	PFAM: Calcineurin-like phosphoesterase
YP_005476577.1	PFAM: Protein kinase domain
YP_005476579.1	PFAM: von Willebrand factor type A domain
YP_005476580.1	PFAM: YhhN-like protein
YP_005476581.1	PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, archaeal type
YP_005476582.1	PFAM: GatB/GatE catalytic domain; GatB domain; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit
YP_005476583.1	PFAM: Amidase; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
YP_005476584.1	PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit
YP_005476585.1	PFAM: Trehalase
YP_005476586.1	PFAM: NUDIX domain
YP_005476587.1	PFAM: Malate/L-lactate dehydrogenase
YP_005476588.1	PFAM: Chorismate synthase; TIGRFAM: chorismate synthase
YP_005476589.1	PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: lipoyltransferase and lipoate-protein ligase
YP_005476590.1	PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase
YP_005476591.1	PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR
YP_005476592.1	PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: DNA-binding protein, YbaB/EbfC family
YP_005476593.1	PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III, subunit gamma and tau
YP_005476594.1	PFAM: ParB-like nuclease domain; KorB domain; TIGRFAM: ParB-like partition proteins
YP_005476595.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_005476596.1	PFAM: Adenosine/AMP deaminase; TIGRFAM: adenosine deaminase
YP_005476597.1	PFAM: Uncharacterized protein family UPF0029; Domain of unknown function (DUF1949); TIGRFAM: uncharacterized protein, YigZ family
YP_005476598.1	PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit
YP_005476599.1	PFAM: Toprim domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit; IMG reference gene:2509556089_SP