-- dump date 20140620_024917 -- class Genbank::Gene -- table gene_note -- id note 14430544 ABC transporter, substrate-binding protein remnant 14430976 plasmid stabilization system protein remnant 14428565 putative major facilitator superfamily (MFS) drug efflux transporter remnant 14431465 putative metalloendopeptidase remnant 14429422 tRNA-pseudogene 14428076 putative transposase remnant 14428077 putative IS481 family transposase remnant 14428082 putative transposase remnant 14430283 conjugal transfer protein G remnant 14430284 putative IS630 family transposase, OrfAB remnant 14431591 NADH-flavin oxidoreductase/NADH oxidase remnant; internal gene fragment; coding sequence disrupted by frameshift(s) 14431631 hypothetical protein remnant; coding sequence disrupted by frameshift(s) 14431638 short-chain dehydrogenase/reductase fragment remnant; 5' gene fragment 14431639 transcriptional regulator remnant, HxlR family; 3' gene fragment 14431654 endoribonuclease L-PSP remnant; 5' fragment of an ORF disrupted by a downstream transposase; the RTCIAT899_PA00370 gene represents the 3' fragment of the original ORF 14431656 endoribonuclease L-PSP remnant; 3' fragment of an ORF disrupted by an upstream transposase; the RTCIAT899_PA00360 gene represents the 5' fragment of the original ORF 14431678 putative IS5 family transposase remnant, IS5 group; 3' gene fragment 14431680 putative IS5 family transposase remnant, IS1031 group; coding sequence disrupted by frameshift(s) 14431681 putative IS5 family transposase remnant, IS903 group; internal gene fragment 14431689 ABC transporter, permease protein remnant 14431697 antirestriction protein remnant; internal gene fragment 14431729 putative IS6 family transposase remnant; internal gene fragments; coding sequence disrupted by frameshift(s) 14431809 filamentation induced by cAMP protein Fic remnant; 3' gene fragment 14431837 arsenical resistance protein ArsH remnant; 3' gene fragment 14431841 argininosuccinate synthase remnant; 3' fragment of an ORF disrupted by the upstream transposase(s); the RTCIAT899_PB00180 gene represents the 3' fragment of the original ORF 14431842 putative ISAs1 family transposase remnant; coding sequence disrupted by frameshift(s) 14431843 argininosuccinate synthase remnant; 5' fragment of an ORF disrupted by the downstream transposase(s); the RTCIAT899_PB00170 gene represents the 3' fragment of the original ORF 14431844 HlyD family type I secretion membrane fusion protein remnant; 3' gene fragment 14431845 putative M10 family peptidase remnant; coding sequence disrupted by frameshift(s) 14431848 putative recombinase/resolvase remnant; 5' gene fragment 14431865 hydroxyacylglutathione hydrolase remnant; internal fragment; coding sequence disrupted by frameshift(s) 14431868 hypothetical protein remnant; 3' fragment of an ORF disrupted by the upstream transposase(s); the RTCIAT899_PB00325 gene represents the 3' fragment of the original ORF 14431872 hypothetical protein remnant; 5' fragment of an ORF disrupted by the downstream transposase(s); the RTCIAT899_PB00305 gene represents the 3' fragment of the original ORF 14431873 putative IS5 family transposase remnant, IS1031 group; coding sequence disrupted by frameshift(s) 14431883 aconitate hydratase remnant; internal fragment; coding sequence disrupted by frameshift(s) 14431899 cytochrome P450-family protein remnant; internal gene fragment 14431903 putative reverse transcriptase remnant; internal gene fragment; coding sequence disrupted by frameshift(s) 14431904 putative aldehyde dehydrogenase remnant; internal gene fragment; coding sequence disrupted by frameshift(s) 14431905 transposase remnant; internal gene fragment; coding sequence disrupted by frameshift(s) 14431914 fatty acid hydroxylase remnant; 5' fragment of an ORF disrupted by the downstream transposase(s); the RTCIAT899_PB00545 gene represents the 3' fragment of the original ORF 14431916 fatty acid hydroxylase remnant; 3' fragment of an ORF disrupted by an upstream transposase(s); the RTCIAT899_PB00535 gene represents the 5' fragment of the original ORF 14431927 putative IS5 family transposase remnant, IS1031 group; 5' fragment of an ORF disrupted by the downstream group II intron; the RTCIAT899_PB00610 gene represents the 3' fragment of the original ORF 14431929 putative IS5 family transposase remnant, IS1031 group; 3' fragment of an ORF disrupted by the upstream group II intron; the RTCIAT899_PB00600 gene represents the 5' fragment of the original ORF 14431930 hypothetical protein remnant; 5' fragment of an ORF disrupted by a downstream transposase(s); the RTCIAT899_PB00635 gene represents the 3' fragment of the original ORF 14431933 putative IS701 family transposase remnant; coding sequence disrupted by frameshift(s) 14431934 hypothetical protein remnant; 3' fragment of an ORF disrupted by an upstream transposase(s); the RTCIAT899_PB00615 gene represents the 5' fragment of the original ORF 14431948 methyl-accepting chemotaxis protein remnant; coding sequence disrupted by frameshift(s) 14431952 ATP pyrophosphatase domain (PP-loop)-containing protein remnant; coding sequence disrupted by frameshift(s) 14431957 DsbA oxidoreductase remnant; 3' fragment of an ORF disrupted by an upstream transposase(s); the RTCIAT899_PB00760 gene represents the 5' fragment of the original ORF 14431959 DsbA oxidoreductase remnant; 5' fragment of an ORF disrupted by a downstream transposase(s); the RTCIAT899_PB00750 gene represents the 3' fragment of the original ORF 14431961 glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein remnant; coding sequence disrupted by frameshift(s) 14431969 putative amine oxidase remnant; 5' gene fragment 14431974 putative aldo/keto reductase remnant; coding sequence disrupted by frameshift(s) 14431976 acetyltransferase remnant, GNAT family; 3' fragment of an ORF disrupted by the upstream transposase(s); the RTCIAT899_PB00860 gene represents the 5' fragment of the original ORF. It has a complete acetyltransferase domain (PFAM Acetyltransf_1) 14431978 acetyltransferase remnant, GNAT family; 5' fragment of an ORF disrupted by the downstream transposase(s); the RTCIAT899_PB00850 gene represents the 3' fragment of the original ORF 14431982 hypothetical protein remnant; coding sequence disrupted by frameshift(s) 14431993 hydrogenase expression/formation protein HupJ remnant; 3' gene fragment 14431994 hydrogenase expression/formation protein HupH remnant; 3' gene fragment 14432006 Omp2b porin remnant; 5' gene fragment of an ORF disrupted by the downstream transposase(s) 14432010 putative IS66 family transposase, OrfC remnant; internal gene fragment of an ORF disrupted by a downstream integrase(s); the RTCIAT899_PB01035 gene represents the 3' fragment of the original ORF. Coding sequence disrupted by frameshift(s) 14432013 putative IS66 family transposase, OrfC remnant; 3' fragment of an ORF disrupted by an upstream integrase(s); the RTCIAT899_PB01020 gene represents an internal fragment of the original ORF 14432023 hypothetical protein remnant; coding sequence disrupted by frameshift(s) 14432032 putative major facilitator superfamily (MFS) drug efflux transporter remmant; coding sequence disrupted by frameshift(s) 14432055 3-oxoacyl-ACP synthase III remnant; internal gene fragment; coding sequence disrupted by frameshift(s) 14432081 putative ribonuclease H remnant; internal gene fragment; coding sequence disrupted by frameshift(s) 14432082 hypothetical protein remnant; coding sequence disrupted by frameshift(s) 14432112 hypothetical protein remnant; coding sequence disrupted by frameshift(s) 14432137 putative IS66 family transposase, OrfB remnant; 3' fragment of an ORF disrupted by an upstream integrase(s); the RTCIAT899_PB01675 gene represents the 5' fragment of the original ORF 14432138 phage integrase family protein remnant; coding sequence disrupted by frameshift(s) 14432141 putative IS66 family transposase, OrfB remnant; 5' fragment of an ORF disrupted by the downstream integrase(s); the RTCIAT899_PB01655 gene represents the 3' fragment of the original ORF 14432145 putative IS21 family transposase IstA protein remnant; coding sequence disrupted by frameshift(s) 14432147 putative IS110 family transposase remnant, IS1111 group; 3' gene fragment 14432150 putative IS66 family transposase, OrfA remnant; 5' gene fragment; coding sequence disrupted by frameshift(s) 14432151 putative IS66 family transposase, OrfC remnant; 3' fragment of an ORF disrupted by an upstream transposase(s); the RTCIAT899_PB01740 gene represents the 5' fragment of the original ORF 14432153 RNA-directed DNA polymerase remnant; 5' gene fragment 14432154 putative IS66 family transposase, OrfC remnant; 5' fragment of an ORF disrupted by the downstream transposase(s); the RTCIAT899_PB01725 gene represents the 3' fragment of the original ORF 14432157 putative IS66 family transposase, OrfC remnant; 3' gene fragment 14432159 putative IS5 family transposase remnant; 5' fragment of an ORF disrupted by the downstream transposase(s); the RTCIAT899_PB01795 gene represents the 3' fragment of the original ORF 14432162 putative IS66 family transposase, OrfC remnant; 5' fragment of an ORF disrupted by the downstream transposase(s); the RTCIAT899_PB01790 gene represents the 3' fragment of the original ORF 14432164 putative IS66 family transposase, OrfC remnant; 3' fragment of an ORF disrupted by an upstream transposase(s); the RTCIAT899_PB01780 gene represents the 5' fragment of the original ORF 14432165 putative IS5 family transposase remnant; 3' fragment of an ORF disrupted by an upstream transposase(s); the RTCIAT899_PB01765 gene represents the 5' fragment of the original ORF 14432195 putative IS701 family transposase remnant; coding sequence disrupted by frameshift(s) 14432197 putative IS66 family transposase remnant; 5' gene fragment; coding sequence disrupted by frameshift(s) 14432201 putative IS5 family transposase, IS427 group, OrfAB remnant; coding sequence disrupted by frameshift(s) 14432206 putative IS66 family transposase, OrfB remnant; 5' fragment of an ORF disrupted by the downstream integrase(s); the RTCIAT899_PB02020 gene represents the 3' fragment of the original ORF 14432207 phage integrase family protein remnant; coding sequence disrupted by frameshift(s) 14432210 putative IS66 family transposase, OrfB remnant; 3' fragment of an ORF disrupted by an upstream integrase(s); the RTCIAT899_PB02000 gene represents the 5' fragment of the original ORF 14432220 putative IS256 family transposase remnant; coding sequence disrupted by frameshift(s) 14432234 putative glutamate dehydrogenase remnant; 3' gene fragment; coding sequence disrupted by frameshift(s) 14432235 succinate-semialdehyde dehydrogenase remnant; coding sequence disrupted by frameshift(s) 14432255 putative transposase remnant; internal gene fragment; coding sequence disrupted by frameshift(s) 14432270 putative IS5 family transposase remnant, IS1031 group; 5' fragment of an ORF disrupted by the downstream group II intron; the RTCIAT899_PB02330 gene represents the 3' fragment of the original ORF 14432272 putative IS5 family transposase remnant, IS1031 group; 3' fragment of an ORF disrupted by an upstream group II intron; the RTCIAT899_PB02320 gene represents the 5' fragment of the original ORF 14432273 putative IS5 family transposase remnant, IS5 group; 3' gene fragment 14432278 hypothetical protein remnant; 3' fragment of an ORF disrupted by an upstream transposase(s); the RTCIAT899_PB02375 gene represents the 5' fragment of the original ORF 14432281 hypothetical protein remnant; 5' fragment of an ORF disrupted by the downstream transposase(s); the RTCIAT899_PB02360 gene represents the 3' fragment of the original ORF 14432284 hypothetical protein remnant; 5' fragment of an ORF disrupted by a downstream transposase(s). The RTCIAT899_PB02420 gene represents the 3' fragment of the original ORF 14432285 putative IS66 family transposase, OrfC remnant; 3' fragment of an ORF disrupted by an upstream transposase(s); the RTCIAT899_PB02405 gene represents the 5' fragment of the original ORF 14432287 putative IS66 family transposase, OrfC remnant; 5' fragment of an ORF disrupted by the downstream transposase(s); the RTCIAT899_PB02395 gene represents the 3' fragment of the original ORF 14432290 hypothetical protein remnant; 3' fragment of an ORF disrupted by an upstream transposase(s); the RTCIAT899_PB02390 gene represents the 5' fragment of the original ORF 14432292 putative IS630 family transposase, OrfAB remnant; 5' fragment with coding sequence disrupted by frameshift(s) of an ORF disrupted by the downstream transposase(s); the RTCIAT899_PB02440 gene represents the 3' fragment of the original ORF 14432294 putative IS630 family transposase, OrfAB remnant; 3' fragment of an ORF disrupted by an upstream transposase(s); the RTCIAT899_PB02430 gene represents the 5' fragment of the original ORF 14432306 putative IS30 family transposase remnant; 5' gene fragment 14432311 putative IS21 family transposase, OrfA remnant; 5' fragment of an ORF disrupted by the downstream transposase(s); the RTCIAT899_PB02545 gene represents the 3' fragment of the original ORF 14432315 putative IS21 family transposase, OrfA remnant; 3' fragment of an ORF disrupted by an upstream transposase(s); the RTCIAT899_PB02525 gene represents the 5' fragment of the original ORF 14432323 putative IS66 family transposase, OrfC remnant; 5' fragment of an ORF disrupted by the downstream transposase(s); the RTCIAT899_PB02595 gene represents the 3' fragment of the original ORF 14432325 putative IS66 family transposase, OrfC remnant; 3' fragment of an ORF disrupted by an upstream transposase(s); the RTCIAT899_PB02585 gene represents the 5' fragment of the original ORF 14432328 putative IS630 family transposase, OrfAB remnant; 5' fragment of an ORF disrupted by the downstream transposase(s); the RTCIAT899_PB02630 gene represents the 3' fragment of the original ORF 14432332 putative IS630 family transposase, OrfAB remnant; 3' fragment of an ORF disrupted by an upstream transposase(s); the RTCIAT899_PB02610 gene represents the 5' fragment of the original ORF 14432341 ATP-dependent DNA ligase remnant; internal gene fragment 14432342 transcriptional regulator protein remnant, GntR family; coding sequence disrupted by frameshift(s) 14432343 DNA polymerase III subunit epsilon remnant; 5' gene fragment 14432356 hypothetical protein remnant; 3' gene fragment; coding sequence disrupted by frameshift(s) 14432357 hypothetical protein remnant; internal gene fragment; coding sequence disrupted by frameshift(s) 14432360 DNA methylase protein remnant; 3' gene fragment 14432362 plasmid partitioning protein remnant; 5' gene fragment; coding sequence disrupted by frameshift(s) 14433606 putative IS6 family transposase remnant; 3' gene fragment 14433637 putative IS6 family transposase remnant; 5' gene fragment; coding sequence disrupted by frameshift(s) 14433656 dihydropyrimidinase remnant; 5' gene fragment 14433657 putative IS6 family transposase remnant; coding sequence disrupted by frameshift(s) 14433723 general L-amino acid ABC transporter, ATP-binding protein fragment 14433727 putative ISL3 family transposase remnant; internal gene fragment; coding sequence disrupted by frameshift(s) 14433746 putative IS630 family transposase remnant; 3' gene fragment 14433795 putative IS6 family transposase remnant; coding sequence disrupted by frameshift(s) 14433799 putative transposase remnant; internal gene fragment; coding sequence disrupted by frameshift(s) 14433828 putative IS6 family transposase remnant; coding sequence disrupted by frameshift(s) 14433839 putative IS6 family transposase remnant; coding sequence disrupted by frameshift(s) 14433967 hypothetical protein remnant; 5' gene fragment 14433121 putative IS3 family transposase, IS51 group, OrfB remnant; coding sequence disrupted by frameshift(s) 14433130 putative IS6 family transposase remnant; 3' gene fragment 14433132 putative ISL3 family transposase remnant; 3' gene fragment 14433272 nudix hydrolase remnant; coding sequence disrupted by frameshift(s) 14433304 hypothetical protein remnant; 5' fragment of an ORF disrupted by a downstream transposase(s); the RTCIAT899_PC03980 gene represents the 3' fragment of the original ORF 14433306 hypothetical protein remnant; 3' fragment of an ORF disrupted by an upstream transposase(s); the RTCIAT899_PC03970 gene represents the 5' fragment of the original ORF 14433486 hypothetical protein remnant; coding sequence disrupted by frameshift(s) 14432434 dTDP-glucose 4,6-dehydratase remnant 14432467 putative IS66 family transposase, OrfC remnant 14432470 putative IS5 family transposase, IS427 group, OrfA remnant 14432475 putative IS3 family transposase, IS51 group, OrfB remnant 14432606 putative ISL3 family transposase remnant 14432717 putative transcriptional regulator remnant, LacI family 14432720 putative transcriptional regulator remnant, LacI family 14432733 succinoglycan biosynthesis succinyltransferase ExoH remnant; 5' gene fragment 14432853 ABC transporter, ATP-binding protein remnant 14434274 HAD family hydrolase remnant