-- dump date 20140620_023152 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 428406000001 SEQ_END SEQ_END NC_012849.1 273136 273136 DR NC_012849.1; contig end 273136..273136 Ralstonia pickettii 12D 428406000002 SEQ_END SEQ_END NC_012851.1 51398 51398 DR NC_012851.1; contig end 51398..51398 Ralstonia pickettii 12D 428406000003 SEQ_END SEQ_END NC_012855.1 389779 389779 DR NC_012855.1; contig end 389779..389779 Ralstonia pickettii 12D 428406000004 SEQ_END SEQ_END NC_012856.1 3647724 3647724 DR NC_012856.1; contig end 3647724..3647724 Ralstonia pickettii 12D 428406000005 SEQ_END SEQ_END NC_012857.1 1323321 1323321 DR NC_012857.1; contig end 1323321..1323321 Ralstonia pickettii 12D YP_002973576.1 CDS Rpic12D_5098 NC_012849.1 135 1505 R KEGG: rso:RSp0654 two component sensor histidine kinase transcription regulator protein; TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; heavy metal sensor signal transduction histidine kinase complement(135..1505) Ralstonia pickettii 12D 8007882 YP_002973577.1 CDS Rpic12D_5099 NC_012849.1 1505 2191 R KEGG: rso:RSp0655 two component response regulator transcription regulator protein; TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; two component heavy metal response transcriptional regulator, winged helix family complement(1505..2191) Ralstonia pickettii 12D 8007885 YP_002973578.1 CDS Rpic12D_5100 NC_012849.1 2379 4301 D TIGRFAM: copper-resistance protein, CopA family; PFAM: multicopper oxidase type 3; multicopper oxidase type 1; multicopper oxidase type 2; KEGG: rso:RSp0656 copper resistance transmembrane protein; copper-resistance protein, CopA family 2379..4301 Ralstonia pickettii 12D 8007886 YP_002973579.1 CDS Rpic12D_5101 NC_012849.1 4321 5586 D PFAM: copper resistance B precursor; KEGG: rme:Rmet_6113 copper resistance B precursor; copper resistance B precursor 4321..5586 Ralstonia pickettii 12D 8007887 YP_002973580.1 CDS Rpic12D_5102 NC_012849.1 5621 6007 D PFAM: copper resistance protein CopC; KEGG: rme:Rmet_6114 copper resistance protein CopC; copper resistance protein CopC 5621..6007 Ralstonia pickettii 12D 8007888 YP_002973581.1 CDS Rpic12D_5103 NC_012849.1 6012 6941 D PFAM: copper resistance D domain protein; KEGG: rso:RSp0659 copper resistance D transmembrane protein; copper resistance D domain protein 6012..6941 Ralstonia pickettii 12D 8007889 YP_002973582.1 CDS Rpic12D_5104 NC_012849.1 7026 7463 D PFAM: protein of unknown function DUF411; KEGG: bte:BTH_II0365 RC180; hypothetical protein 7026..7463 Ralstonia pickettii 12D 8007890 YP_002973583.1 CDS Rpic12D_5105 NC_012849.1 7854 9119 R KEGG: rme:Rmet_6120 hypothetical protein; hypothetical protein complement(7854..9119) Ralstonia pickettii 12D 8007891 YP_002973584.1 CDS Rpic12D_5106 NC_012849.1 9881 10363 R PFAM: blue (type 1) copper domain protein; KEGG: rme:Rmet_6116 blue (type 1) copper domain; blue (type 1) copper domain protein complement(9881..10363) Ralstonia pickettii 12D 8007892 YP_002973585.1 CDS Rpic12D_5107 NC_012849.1 10740 11147 D hypothetical protein 10740..11147 Ralstonia pickettii 12D 8007893 YP_002973586.1 CDS Rpic12D_5108 NC_012849.1 11200 12102 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bur:Bcep18194_B0394 LysR family transcriptional regulator; LysR family transcriptional regulator complement(11200..12102) Ralstonia pickettii 12D 8007894 YP_002973587.1 CDS Rpic12D_5109 NC_012849.1 12188 13345 D PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: mag:amb1294 cystathionine beta-lyase/cystathionine gamma-synthase; Cys/Met metabolism pyridoxal-phosphate-dependent protein 12188..13345 Ralstonia pickettii 12D 8007895 YP_002973588.1 CDS Rpic12D_5110 NC_012849.1 13389 14276 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: bte:BTH_I1225 glutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein; extracellular solute-binding protein family 3 13389..14276 Ralstonia pickettii 12D 8007896 YP_002973589.1 CDS Rpic12D_5111 NC_012849.1 14305 15042 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cti:RALTA_A0429 glutamate/aspartate transport protein; ABC superfamily, membrane component; polar amino acid ABC transporter, inner membrane subunit 14305..15042 Ralstonia pickettii 12D 8007897 YP_002973590.1 CDS Rpic12D_5112 NC_012849.1 15050 15739 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: met:M446_4545 polar amino acid ABC transporter, inner membrane subunit; polar amino acid ABC transporter, inner membrane subunit 15050..15739 Ralstonia pickettii 12D 8007898 YP_002973591.1 CDS Rpic12D_5113 NC_012849.1 15790 16524 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rso:RSc0484 putative glutamate/aspartate transport ATP-binding ABC transporter protein; ABC transporter 15790..16524 Ralstonia pickettii 12D 8007899 YP_002973592.1 CDS Rpic12D_5114 NC_012849.1 16626 17069 D hypothetical protein 16626..17069 Ralstonia pickettii 12D 8007900 YP_002973593.1 CDS Rpic12D_5115 NC_012849.1 17098 18105 D PFAM: porin Gram-negative type; KEGG: dac:Daci_0724 porin; porin Gram-negative type 17098..18105 Ralstonia pickettii 12D 8007901 YP_002973594.1 CDS Rpic12D_5117 NC_012849.1 18603 18989 D PFAM: copper resistance protein CopC; KEGG: rme:Rmet_6114 copper resistance protein CopC; copper resistance protein CopC 18603..18989 Ralstonia pickettii 12D 8007903 YP_002973595.1 CDS Rpic12D_5118 NC_012849.1 19043 19714 D hypothetical protein 19043..19714 Ralstonia pickettii 12D 8007904 YP_002973596.1 CDS Rpic12D_5120 NC_012849.1 20279 23509 R TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: rme:Rmet_6210 heavy metal efflux pump CzcA; heavy metal efflux pump, CzcA family complement(20279..23509) Ralstonia pickettii 12D 8007906 YP_002973597.1 CDS Rpic12D_5123 NC_012849.1 26755 27297 R KEGG: pna:Pnap_4763 hypothetical protein; hypothetical protein complement(26755..27297) Ralstonia pickettii 12D 8007909 YP_002973598.1 CDS Rpic12D_5124 NC_012849.1 27305 27631 R PFAM: PemK family protein; KEGG: acr:Acry_3598 transcriptional modulator of MazE/toxin, MazF; transcriptional modulator of MazE/toxin, MazF complement(27305..27631) Ralstonia pickettii 12D 8007910 YP_002973599.1 CDS Rpic12D_5125 NC_012849.1 27628 27885 R KEGG: btr:Btr_0446 PemI protein; transcriptional regulator/antitoxin, MazE complement(27628..27885) Ralstonia pickettii 12D 8007883 YP_002973600.1 CDS Rpic12D_5126 NC_012849.1 28046 28639 D PFAM: Resolvase domain; KEGG: xcb:XC_2601 invertase/recombinase protein; Resolvase domain protein 28046..28639 Ralstonia pickettii 12D 8007884 YP_002973601.1 CDS Rpic12D_5127 NC_012849.1 28636 29019 D hypothetical protein 28636..29019 Ralstonia pickettii 12D 8007707 YP_002973602.1 CDS Rpic12D_5128 NC_012849.1 29190 29315 R hypothetical protein complement(29190..29315) Ralstonia pickettii 12D 8007708 YP_002973603.1 CDS Rpic12D_5129 NC_012849.1 29488 29694 D KEGG: nha:Nham_4380 copper-translocating P-type ATPase; hypothetical protein 29488..29694 Ralstonia pickettii 12D 8007709 YP_002973604.1 CDS Rpic12D_5130 NC_012849.1 29703 29897 D hypothetical protein 29703..29897 Ralstonia pickettii 12D 8007710 YP_002973605.1 CDS Rpic12D_5131 NC_012849.1 29870 31123 D KEGG: azo:azo1681 hypothetical protein; hypothetical protein 29870..31123 Ralstonia pickettii 12D 8007711 YP_002973606.1 CDS Rpic12D_5132 NC_012849.1 31174 31443 D hypothetical protein 31174..31443 Ralstonia pickettii 12D 8007712 YP_002973607.1 CDS Rpic12D_5133 NC_012849.1 31383 32102 R PFAM: zinc/iron permease; KEGG: gme:Gmet_0228 hypothetical protein; zinc/iron permease complement(31383..32102) Ralstonia pickettii 12D 8007713 YP_002973608.1 CDS Rpic12D_5134 NC_012849.1 32391 32768 D hypothetical protein 32391..32768 Ralstonia pickettii 12D 8007714 YP_002973609.1 CDS Rpic12D_5135 NC_012849.1 32829 34136 D PFAM: outer membrane efflux protein; KEGG: rme:Rmet_6208 outer membrane efflux protein; outer membrane efflux protein 32829..34136 Ralstonia pickettii 12D 8007715 YP_002973610.1 CDS Rpic12D_5136 NC_012849.1 34133 35326 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rme:Rmet_6209 membrane fusion protein cluster 2; efflux transporter, RND family, MFP subunit 34133..35326 Ralstonia pickettii 12D 8007716 YP_002973611.1 CDS Rpic12D_5137 NC_012849.1 35323 38562 D TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: rme:Rmet_6210 heavy metal efflux pump CzcA; heavy metal efflux pump, CzcA family 35323..38562 Ralstonia pickettii 12D 8007717 YP_002973612.1 CDS Rpic12D_5138 NC_012849.1 38628 39413 D KEGG: pol:Bpro_2506 hypothetical protein; hypothetical protein 38628..39413 Ralstonia pickettii 12D 8007718 YP_002973613.1 CDS Rpic12D_5139 NC_012849.1 39463 39813 D KEGG: pol:Bpro_2507 hypothetical protein; hypothetical protein 39463..39813 Ralstonia pickettii 12D 8007719 YP_002973614.1 CDS Rpic12D_5140 NC_012849.1 39888 41207 D PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_2492 major facilitator superfamily MFS_1; major facilitator superfamily MFS_1 39888..41207 Ralstonia pickettii 12D 8007720 YP_002973615.1 CDS Rpic12D_5141 NC_012849.1 41212 41757 D KEGG: ajs:Ajs_1327 hypothetical protein; hypothetical protein 41212..41757 Ralstonia pickettii 12D 8007721 YP_002973616.1 CDS Rpic12D_5142 NC_012849.1 41754 42152 D KEGG: bid:Bind_3015 integral membrane sensor hybrid histidine kinase; hypothetical protein 41754..42152 Ralstonia pickettii 12D 8007722 YP_002973617.1 CDS Rpic12D_5143 NC_012849.1 42309 42611 D hypothetical protein 42309..42611 Ralstonia pickettii 12D 8007723 YP_002973618.1 CDS Rpic12D_5145 NC_012849.1 43681 44688 D KEGG: pol:Bpro_2486 transposase Tn3; transposase Tn3 43681..44688 Ralstonia pickettii 12D 8007725 YP_002973619.1 CDS Rpic12D_5146 NC_012849.1 44805 47720 R PFAM: transposase Tn3 family protein; KEGG: rme:Rmet_1544 transposase Tn3; transposase Tn3 family protein complement(44805..47720) Ralstonia pickettii 12D 8007726 YP_002973620.1 CDS Rpic12D_5148 NC_012849.1 48338 49645 R PFAM: outer membrane efflux protein; KEGG: rme:Rmet_6208 outer membrane efflux protein; outer membrane efflux protein complement(48338..49645) Ralstonia pickettii 12D 8007728 YP_002973621.1 CDS Rpic12D_5149 NC_012849.1 49813 50091 D PFAM: protein of unknown function DUF156; KEGG: bxe:Bxe_B0049 hypothetical protein; hypothetical protein 49813..50091 Ralstonia pickettii 12D 8007729 YP_002973622.1 CDS Rpic12D_5150 NC_012849.1 50099 51376 D TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bam:Bamb_5056 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 50099..51376 Ralstonia pickettii 12D 8007730 YP_002973623.1 CDS Rpic12D_5151 NC_012849.1 51588 51734 D hypothetical protein 51588..51734 Ralstonia pickettii 12D 8007731 YP_002973624.1 CDS Rpic12D_5152 NC_012849.1 51819 52811 D KEGG: cti:pRALTA_0657 putative cointegrate resolution protein T; putative cointegrate resolution protein T 51819..52811 Ralstonia pickettii 12D 8007732 YP_002973625.1 CDS Rpic12D_5153 NC_012849.1 53252 53830 D TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: rso:RSc2364 hypothetical protein; 2'-5' RNA ligase 53252..53830 Ralstonia pickettii 12D 8007733 YP_002973626.1 CDS Rpic12D_5154 NC_012849.1 53930 54823 R PFAM: integrase family protein; KEGG: cti:pRALTA_0147 integrase/recombinase; integrase family protein complement(53930..54823) Ralstonia pickettii 12D 8007734 YP_002973627.1 CDS Rpic12D_5155 NC_012849.1 55000 55293 R PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS; KEGG: cti:RALTA_B0237 histone-like nucleoid-structuring protein H-NS; histone family protein nucleoid-structuring protein H-NS complement(55000..55293) Ralstonia pickettii 12D 8007735 YP_002973628.1 CDS Rpic12D_5156 NC_012849.1 55594 55692 D hypothetical protein 55594..55692 Ralstonia pickettii 12D 8007736 YP_002973629.1 CDS Rpic12D_5157 NC_012849.1 55878 56399 D hypothetical protein 55878..56399 Ralstonia pickettii 12D 8007737 YP_002973630.1 CDS Rpic12D_5158 NC_012849.1 56482 56775 R PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS; KEGG: rso:RS00711 putative HNS-like transcription regulator protein; histone family protein nucleoid-structuring protein H-NS complement(56482..56775) Ralstonia pickettii 12D 8007738 YP_002973631.1 CDS Rpic12D_5159 NC_012849.1 56888 57988 R KEGG: sbm:Shew185_3893 hypothetical protein; hypothetical protein complement(56888..57988) Ralstonia pickettii 12D 8007739 YP_002973632.1 CDS Rpic12D_5160 NC_012849.1 58083 58991 R KEGG: rpt:Rpal_3157 hypothetical protein; hypothetical protein complement(58083..58991) Ralstonia pickettii 12D 8007740 YP_002973633.1 CDS Rpic12D_5161 NC_012849.1 59222 60115 D KEGG: pna:Pnap_4761 mucin-associated surface protein; mucin-associated surface protein 59222..60115 Ralstonia pickettii 12D 8007741 YP_002973634.1 CDS Rpic12D_5162 NC_012849.1 60220 61170 D KEGG: mmr:Mmar10_3077 GumN family protein; hypothetical protein 60220..61170 Ralstonia pickettii 12D 8007742 YP_002973635.1 CDS Rpic12D_5163 NC_012849.1 61182 62036 D hypothetical protein 61182..62036 Ralstonia pickettii 12D 8007743 YP_002973636.1 CDS Rpic12D_5164 NC_012849.1 62156 62548 D PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: cti:pRALTA_0149 putative histone-like DNA-binding protein; histone family protein DNA-binding protein 62156..62548 Ralstonia pickettii 12D 8007744 YP_002973637.1 CDS Rpic12D_5165 NC_012849.1 62634 63395 D hypothetical protein 62634..63395 Ralstonia pickettii 12D 8007745 YP_002973638.1 CDS Rpic12D_5166 NC_012849.1 63410 63559 R hypothetical protein complement(63410..63559) Ralstonia pickettii 12D 8007746 YP_002973639.1 CDS Rpic12D_5167 NC_012849.1 63540 64265 R KEGG: atc:AGR_pTi_214 hypothetical protein; hypothetical protein complement(63540..64265) Ralstonia pickettii 12D 8007747 YP_002973640.1 CDS Rpic12D_5168 NC_012849.1 64655 67054 R PFAM: restriction endonuclease; KEGG: bcj:BCAS0716 putative restriction endonuclease; restriction endonuclease complement(64655..67054) Ralstonia pickettii 12D 8007748 YP_002973641.1 CDS Rpic12D_5169 NC_012849.1 67071 67925 R hypothetical protein complement(67071..67925) Ralstonia pickettii 12D 8007749 YP_002973642.1 CDS Rpic12D_5170 NC_012849.1 67980 68165 R hypothetical protein complement(67980..68165) Ralstonia pickettii 12D 8007750 YP_002973643.1 CDS Rpic12D_5171 NC_012849.1 68162 68749 R KEGG: vvy:VVA0688 hypothetical protein; hypothetical protein complement(68162..68749) Ralstonia pickettii 12D 8007751 YP_002973644.1 CDS Rpic12D_5172 NC_012849.1 68967 71081 D PFAM: integrase family protein; KEGG: rme:Rmet_6086 phage integrase; integrase family protein 68967..71081 Ralstonia pickettii 12D 8007752 YP_002973645.1 CDS Rpic12D_5173 NC_012849.1 71800 72498 D PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bcm:Bcenmc03_6670 cobyrinic acid ac-diamide synthase; Cobyrinic acid ac-diamide synthase 71800..72498 Ralstonia pickettii 12D 8007753 YP_002973646.1 CDS Rpic12D_5174 NC_012849.1 72491 73567 D KEGG: bam:Bamb_6001 ParB-like partition proteins; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; parB-like partition protein 72491..73567 Ralstonia pickettii 12D 8007754 YP_002973647.1 CDS Rpic12D_5175 NC_012849.1 74537 75844 D KEGG: bmj:BMULJ_05368 replication protein; replication protein 74537..75844 Ralstonia pickettii 12D 8007755 YP_002973648.1 CDS Rpic12D_5176 NC_012849.1 75849 77570 R PFAM: UvrD/REP helicase; KEGG: cti:pRALTA_0230 putative ATP-dependent DNA helicase; UvrD/REP helicase complement(75849..77570) Ralstonia pickettii 12D 8007756 YP_002973649.1 CDS Rpic12D_5177 NC_012849.1 77678 78151 R KEGG: bmu:Bmul_5587 hypothetical protein; hypothetical protein complement(77678..78151) Ralstonia pickettii 12D 8007757 YP_002973650.1 CDS Rpic12D_5178 NC_012849.1 78288 78590 R PFAM: flagellar transcriptional activator; KEGG: rso:RSp1413 transcriptional activator FlhD; flagellar transcriptional activator complement(78288..78590) Ralstonia pickettii 12D 8007758 YP_002973651.1 CDS Rpic12D_5179 NC_012849.1 78739 79605 R KEGG: rme:Rmet_6313 hypothetical protein; hypothetical protein complement(78739..79605) Ralstonia pickettii 12D 8007759 YP_002973652.1 CDS Rpic12D_5180 NC_012849.1 79665 80282 R KEGG: cti:pRALTA_0228 hypothetical protein; hypothetical protein complement(79665..80282) Ralstonia pickettii 12D 8007760 YP_002973653.1 CDS Rpic12D_5181 NC_012849.1 80282 80530 R KEGG: bac:BamMC406_6799 hypothetical protein; hypothetical protein complement(80282..80530) Ralstonia pickettii 12D 8007761 YP_002973654.1 CDS Rpic12D_5182 NC_012849.1 80502 81008 R KEGG: cti:pRALTA_0226 hypothetical protein; hypothetical protein complement(80502..81008) Ralstonia pickettii 12D 8007762 YP_002973655.1 CDS Rpic12D_5183 NC_012849.1 81016 82872 R KEGG: rme:Rmet_6309 hypothetical protein; hypothetical protein complement(81016..82872) Ralstonia pickettii 12D 8007763 YP_002973656.1 CDS Rpic12D_5184 NC_012849.1 82869 84131 R KEGG: cti:pRALTA_0224 type IV secretory pathway, putative conjugative relaxase; type IV secretory pathway, putative conjugative relaxase complement(82869..84131) Ralstonia pickettii 12D 8007764 YP_002973657.1 CDS Rpic12D_5185 NC_012849.1 84136 85206 R PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: cti:pRALTA_0223 type IV secretory pathway, conjugal transfert protein, putative permease; TrbL/VirB6 plasmid conjugal transfer protein complement(84136..85206) Ralstonia pickettii 12D 8007765 YP_002973658.1 CDS Rpic12D_5186 NC_012849.1 85218 86009 R KEGG: cti:pRALTA_0222 type IV secretory pathway, entry exclusion protein A (putative protein precursor); type IV secretory pathway, entry exclusion protein A (putative protein precursor) complement(85218..86009) Ralstonia pickettii 12D 8007766 YP_002973659.1 CDS Rpic12D_5188 NC_012849.1 86702 87034 D PFAM: transposase IS3/IS911 family protein; KEGG: mca:MCA0906 ISMca2, transposase, OrfA; transposase IS3/IS911 family protein 86702..87034 Ralstonia pickettii 12D 8007768 YP_002973660.1 CDS Rpic12D_5189 NC_012849.1 87031 87900 D PFAM: Integrase catalytic region; KEGG: mca:MCA0907 ISMca2, transposase, OrfB; Integrase catalytic region 87031..87900 Ralstonia pickettii 12D 8007769 YP_002973661.1 CDS Rpic12D_5190 NC_012849.1 87990 89039 R PFAM: type II secretion system protein E; KEGG: cti:pRALTA_0218 type IV secretory pathway, conjugal transfert protein; putative chaperonin; type II secretion system protein E complement(87990..89039) Ralstonia pickettii 12D 8007770 YP_002973662.1 CDS Rpic12D_5191 NC_012849.1 89461 90174 D KEGG: cti:pRALTA_0217 type IV secretory pathway, conjugal transfert protein (putative precursor); type IV secretory pathway, conjugal transfert protein (putative precursor) 89461..90174 Ralstonia pickettii 12D 8007771 YP_002973663.1 CDS Rpic12D_5192 NC_012849.1 90171 91052 D PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: rme:Rmet_6300 conjugal transfer protein TrbG/VirB9/CagX; Conjugal transfer protein TrbG/VirB9/CagX 90171..91052 Ralstonia pickettii 12D 8007772 YP_002973664.1 CDS Rpic12D_5193 NC_012849.1 91063 92274 D PFAM: conjugation TrbI family protein; KEGG: cti:pRALTA_0215 type IV secretion system, conjugation efficiency factor; conjugation TrbI family protein 91063..92274 Ralstonia pickettii 12D 8007773 YP_002973665.1 CDS Rpic12D_5194 NC_012849.1 92294 93067 D KEGG: cti:pRALTA_0214 type IV secretory pathway, putative lytic transglycosylase; putative exported protein; type IV secretory pathway, putative lytic transglycosylase; putative exported protein 92294..93067 Ralstonia pickettii 12D 8007774 YP_002973666.1 CDS Rpic12D_5195 NC_012849.1 93064 94314 D KEGG: cti:pRALTA_0213 conserved hypothetical protein; putative PilL-like protein; putative exported protein; PilL protein 93064..94314 Ralstonia pickettii 12D 8007775 YP_002973667.1 CDS Rpic12D_5196 NC_012849.1 94311 94787 D PFAM: Lytic transglycosylase catalytic; KEGG: cti:pRALTA_0212 putative lytic transglycosylase, invasion protein (PilT homolog); Lytic transglycosylase catalytic 94311..94787 Ralstonia pickettii 12D 8007776 YP_002973668.1 CDS Rpic12D_5197 NC_012849.1 94805 95329 D KEGG: cti:pRALTA_0210 conserved hypothetical protein; putative pilus-related protein (BfpG homolog); putative membrane protein; putative pilus-related protein 94805..95329 Ralstonia pickettii 12D 8007777 YP_002973669.1 CDS Rpic12D_5198 NC_012849.1 95326 97017 D KEGG: cti:pRALTA_0209 type IV secretion pathway, outer membrane lipoprotein, putative precursor (PilN homolog); type IV secretion pathway protein 95326..97017 Ralstonia pickettii 12D 8007778 YP_002973670.1 CDS Rpic12D_5199 NC_012849.1 97435 97740 D KEGG: reh:PHG350 hypothetical protein; hypothetical protein 97435..97740 Ralstonia pickettii 12D 8007779 YP_002973671.1 CDS Rpic12D_5200 NC_012849.1 97742 98995 D KEGG: cti:pRALTA_0206 putative type IV pilus biosynthesis protein; putative PilO homolog; putative precursor; putative type IV pilus biosynthesis protein 97742..98995 Ralstonia pickettii 12D 8007780 YP_002973672.1 CDS Rpic12D_5201 NC_012849.1 98997 100583 D PFAM: type II secretion system protein E; KEGG: reh:PHG348 putative traffic warden ATPase; type II secretion system protein E 98997..100583 Ralstonia pickettii 12D 8007781 YP_002973673.1 CDS Rpic12D_5202 NC_012849.1 100580 101653 D PFAM: type II secretion system protein; KEGG: cti:pRALTA_0204 putative type IV secretion apparatus component (PilR homolog); type II secretion system protein 100580..101653 Ralstonia pickettii 12D 8007704 YP_002973674.1 CDS Rpic12D_5203 NC_012849.1 101690 102190 D KEGG: cti:pRALTA_0202 putative prepilin type IV pili (PilS homolog); putative prepilin type IV pili 101690..102190 Ralstonia pickettii 12D 8007705 YP_002973675.1 CDS Rpic12D_5204 NC_012849.1 102213 102689 D KEGG: cti:pRALTA_0201 conserved hypothetical protein; putative exported protein; hypothetical protein 102213..102689 Ralstonia pickettii 12D 8007706 YP_002973676.1 CDS Rpic12D_5205 NC_012849.1 102702 104000 D KEGG: reh:PHG343 putative adhesin precursor; putative adhesin precursor 102702..104000 Ralstonia pickettii 12D 8007990 YP_002973677.1 CDS Rpic12D_5206 NC_012849.1 104013 104654 D KEGG: bac:BamMC406_6557 hypothetical protein; hypothetical protein 104013..104654 Ralstonia pickettii 12D 8007911 YP_002973678.1 CDS Rpic12D_5207 NC_012849.1 104762 105745 R PFAM: SCP-like extracellular; KEGG: bvi:Bcep1808_7071 allergen V5/TPX-1-like protein; SCP-like extracellular complement(104762..105745) Ralstonia pickettii 12D 8007912 YP_002973679.1 CDS Rpic12D_5208 NC_012849.1 105894 106337 R KEGG: bac:BamMC406_6554 hypothetical protein; hypothetical protein complement(105894..106337) Ralstonia pickettii 12D 8007913 YP_002973680.1 CDS Rpic12D_5209 NC_012849.1 106448 106807 R hypothetical protein complement(106448..106807) Ralstonia pickettii 12D 8007914 YP_002973681.1 CDS Rpic12D_5210 NC_012849.1 106954 108135 R KEGG: cti:pRALTA_0193 hypothetical protein; hypothetical protein complement(106954..108135) Ralstonia pickettii 12D 8007915 YP_002973682.1 CDS Rpic12D_5211 NC_012849.1 108186 109310 R KEGG: rme:Rmet_6283 hypothetical protein; hypothetical protein complement(108186..109310) Ralstonia pickettii 12D 8007916 YP_002973683.1 CDS Rpic12D_5212 NC_012849.1 110141 110455 D KEGG: rme:Rmet_6281 hypothetical protein; hypothetical protein 110141..110455 Ralstonia pickettii 12D 8007917 YP_002973684.1 CDS Rpic12D_5213 NC_012849.1 110553 110981 D KEGG: rme:Rmet_6280 hypothetical protein; hypothetical protein 110553..110981 Ralstonia pickettii 12D 8007918 YP_002973685.1 CDS Rpic12D_5214 NC_012849.1 110990 111757 D KEGG: reh:PHG336 hypothetical protein; hypothetical protein 110990..111757 Ralstonia pickettii 12D 8007919 YP_002973686.1 CDS Rpic12D_5215 NC_012849.1 111775 112308 D binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 111775..112308 Ralstonia pickettii 12D 8007920 YP_002973687.1 CDS Rpic12D_5216 NC_012849.1 112546 113622 D PFAM: P4 alpha zinc-binding domain protein; SMART: P4 alpha zinc-binding domain protein; KEGG: cti:pRALTA_0187 putative DNA primase; P4 alpha zinc-binding domain protein 112546..113622 Ralstonia pickettii 12D 8007921 YP_002973688.1 CDS Rpic12D_5217 NC_012849.1 113718 113930 D KEGG: cti:pRALTA_0186 hypothetical protein; hypothetical protein 113718..113930 Ralstonia pickettii 12D 8007922 YP_002973689.1 CDS Rpic12D_5218 NC_012849.1 114012 114149 R hypothetical protein complement(114012..114149) Ralstonia pickettii 12D 8007923 YP_002973690.1 CDS Rpic12D_5219 NC_012849.1 114267 114653 R KEGG: reh:PHG331 hypothetical protein; hypothetical protein complement(114267..114653) Ralstonia pickettii 12D 8007924 YP_002973691.1 CDS Rpic12D_5220 NC_012849.1 114673 115671 R KEGG: reh:PHG330 hypothetical protein; hypothetical protein complement(114673..115671) Ralstonia pickettii 12D 8007925 YP_002973692.1 CDS Rpic12D_5221 NC_012849.1 116851 118038 D PFAM: helix-turn-helix Fis-type; KEGG: rme:Rmet_6273 helix-turn-helix, fis-type; transcriptional regulator, Fis family 116851..118038 Ralstonia pickettii 12D 8007926 YP_002973693.1 CDS Rpic12D_5222 NC_012849.1 118048 119205 D KEGG: bpy:Bphyt_7376 hypothetical protein; hypothetical protein 118048..119205 Ralstonia pickettii 12D 8007927 YP_002973694.1 CDS Rpic12D_5223 NC_012849.1 119285 119407 R hypothetical protein complement(119285..119407) Ralstonia pickettii 12D 8007928 YP_002973695.1 CDS Rpic12D_5224 NC_012849.1 119433 120350 R PFAM: DNA/RNA non-specific endonuclease; SMART: DNA/RNA non-specific endonuclease; KEGG: rme:Rmet_6268 DNA/RNA non-specific endonuclease; DNA/RNA non-specific endonuclease complement(119433..120350) Ralstonia pickettii 12D 8007929 YP_002973696.1 CDS Rpic12D_5225 NC_012849.1 120592 121086 R KEGG: cti:pRALTA_0174 hypothetical protein; hypothetical protein complement(120592..121086) Ralstonia pickettii 12D 8007930 YP_002973697.1 CDS Rpic12D_5226 NC_012849.1 121245 121487 R KEGG: rme:Rmet_6266 hypothetical protein; hypothetical protein complement(121245..121487) Ralstonia pickettii 12D 8007931 YP_002973698.1 CDS Rpic12D_5227 NC_012849.1 121798 122661 R KEGG: rso:RSc1656 hypothetical protein; hypothetical protein complement(121798..122661) Ralstonia pickettii 12D 8007932 YP_002973699.1 CDS Rpic12D_5228 NC_012849.1 122645 122977 R hypothetical protein complement(122645..122977) Ralstonia pickettii 12D 8007933 YP_002973700.1 CDS Rpic12D_5229 NC_012849.1 122977 124884 R hypothetical protein complement(122977..124884) Ralstonia pickettii 12D 8007934 YP_002973701.1 CDS Rpic12D_5230 NC_012849.1 124986 125756 R hypothetical protein complement(124986..125756) Ralstonia pickettii 12D 8007935 YP_002973702.1 CDS Rpic12D_5231 NC_012849.1 125796 127163 R KEGG: amr:AM1_F0154 hypothetical protein; hypothetical protein complement(125796..127163) Ralstonia pickettii 12D 8007936 YP_002973703.1 CDS Rpic12D_5232 NC_012849.1 127163 128383 R KEGG: reh:PHG322 hypothetical protein; hypothetical protein complement(127163..128383) Ralstonia pickettii 12D 8007937 YP_002973704.1 CDS Rpic12D_5233 NC_012849.1 128395 129855 R KEGG: reh:PHG321 putative helicase superfamily I; putative helicase superfamily I complement(128395..129855) Ralstonia pickettii 12D 8007938 YP_002973705.1 CDS Rpic12D_5234 NC_012849.1 129857 130291 R KEGG: cti:pRALTA_0165 hypothetical protein; hypothetical protein complement(129857..130291) Ralstonia pickettii 12D 8007939 YP_002973706.1 CDS Rpic12D_5235 NC_012849.1 130464 130952 D KEGG: rme:Rmet_6246 hypothetical protein; hypothetical protein 130464..130952 Ralstonia pickettii 12D 8007940 YP_002973707.1 CDS Rpic12D_5236 NC_012849.1 131304 131678 D KEGG: reh:PHG316 hypothetical protein; hypothetical protein 131304..131678 Ralstonia pickettii 12D 8007941 YP_002973708.1 CDS Rpic12D_5237 NC_012849.1 131675 132607 D KEGG: rme:Rmet_6243 hypothetical protein; hypothetical protein 131675..132607 Ralstonia pickettii 12D 8007942 YP_002973709.1 CDS Rpic12D_5238 NC_012849.1 132874 134538 D KEGG: rme:Rmet_6241 ParB family protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; parB-like partition protein 132874..134538 Ralstonia pickettii 12D 8007943 YP_002973710.1 CDS Rpic12D_5239 NC_012849.1 134583 135068 D KEGG: rme:Rmet_6240 hypothetical protein; hypothetical protein 134583..135068 Ralstonia pickettii 12D 8007944 YP_002973711.1 CDS Rpic12D_5240 NC_012849.1 135078 135296 D KEGG: bvi:Bcep1808_7095 hypothetical protein; hypothetical protein 135078..135296 Ralstonia pickettii 12D 8007945 YP_002973712.1 CDS Rpic12D_5241 NC_012849.1 135396 136532 D KEGG: reh:PHG309 hypothetical protein; hypothetical protein 135396..136532 Ralstonia pickettii 12D 8007946 YP_002973713.1 CDS Rpic12D_5242 NC_012849.1 136541 137263 D KEGG: rme:Rmet_6237 hypothetical protein; hypothetical protein 136541..137263 Ralstonia pickettii 12D 8007947 YP_002973714.1 CDS Rpic12D_5243 NC_012849.1 137265 137906 D KEGG: reh:PHG307 hypothetical protein; hypothetical protein 137265..137906 Ralstonia pickettii 12D 8007948 YP_002973715.1 CDS Rpic12D_5245 NC_012849.1 138392 138979 R hypothetical protein complement(138392..138979) Ralstonia pickettii 12D 8007950 YP_002973716.1 CDS Rpic12D_5246 NC_012849.1 139440 139634 D hypothetical protein 139440..139634 Ralstonia pickettii 12D 8007951 YP_002973717.1 CDS Rpic12D_5247 NC_012849.1 139886 141961 D PFAM: band 7 protein; KEGG: fps:FP0707 hypothetical protein; band 7 protein 139886..141961 Ralstonia pickettii 12D 8007952 YP_002973718.1 CDS Rpic12D_5248 NC_012849.1 141971 142357 D hypothetical protein 141971..142357 Ralstonia pickettii 12D 8007953 YP_002973719.1 CDS Rpic12D_5249 NC_012849.1 142496 142879 D hypothetical protein 142496..142879 Ralstonia pickettii 12D 8007954 YP_002973720.1 CDS Rpic12D_5250 NC_012849.1 143199 143624 D hypothetical protein 143199..143624 Ralstonia pickettii 12D 8007955 YP_002973721.1 CDS Rpic12D_5251 NC_012849.1 143877 144041 D hypothetical protein 143877..144041 Ralstonia pickettii 12D 8007956 YP_002973722.1 CDS Rpic12D_5252 NC_012849.1 144057 144353 D hypothetical protein 144057..144353 Ralstonia pickettii 12D 8007957 YP_002973723.1 CDS Rpic12D_5253 NC_012849.1 144731 145114 D KEGG: rme:Rmet_6233 putative outer membrane lipoprotein transmembrane; putative outer membrane lipoprotein transmembrane 144731..145114 Ralstonia pickettii 12D 8007958 YP_002973724.1 CDS Rpic12D_5254 NC_012849.1 145185 145421 D hypothetical protein 145185..145421 Ralstonia pickettii 12D 8007959 YP_002973725.1 CDS Rpic12D_5255 NC_012849.1 145432 145665 D KEGG: bvi:Bcep1808_6920 hypothetical protein; hypothetical protein 145432..145665 Ralstonia pickettii 12D 8007960 YP_002973726.1 CDS Rpic12D_5256 NC_012849.1 145847 146227 D KEGG: rme:Rmet_6232 hypothetical protein; hypothetical protein 145847..146227 Ralstonia pickettii 12D 8007961 YP_002973727.1 CDS Rpic12D_5257 NC_012849.1 146240 146710 D KEGG: reh:PHG302 hypothetical protein; hypothetical protein 146240..146710 Ralstonia pickettii 12D 8007962 YP_002973728.1 CDS Rpic12D_5258 NC_012849.1 146713 146808 D hypothetical protein 146713..146808 Ralstonia pickettii 12D 8007963 YP_002973729.1 CDS Rpic12D_5259 NC_012849.1 146928 147437 D KEGG: bch:Bcen2424_6938 hypothetical protein; hypothetical protein 146928..147437 Ralstonia pickettii 12D 8007964 YP_002973730.1 CDS Rpic12D_5260 NC_012849.1 147560 147940 D KEGG: reh:PHG301 hypothetical protein; hypothetical protein 147560..147940 Ralstonia pickettii 12D 8007965 YP_002973731.1 CDS Rpic12D_5261 NC_012849.1 148026 149564 D KEGG: rme:Rmet_6228 hypothetical protein; hypothetical protein 148026..149564 Ralstonia pickettii 12D 8007966 YP_002973732.1 CDS Rpic12D_5262 NC_012849.1 149845 150909 D SMART: AAA ATPase; KEGG: bac:BamMC406_6512 ATPase; AAA ATPase 149845..150909 Ralstonia pickettii 12D 8007967 YP_002973733.1 CDS Rpic12D_5263 NC_012849.1 150986 151909 D KEGG: bac:BamMC406_6511 hypothetical protein; hypothetical protein 150986..151909 Ralstonia pickettii 12D 8007968 YP_002973734.1 CDS Rpic12D_5264 NC_012849.1 151919 153136 D KEGG: bac:BamMC406_6510 hypothetical protein; hypothetical protein 151919..153136 Ralstonia pickettii 12D 8007969 YP_002973735.1 CDS Rpic12D_5265 NC_012849.1 153283 153684 D KEGG: reu:Reut_B3485 hypothetical protein; hypothetical protein 153283..153684 Ralstonia pickettii 12D 8007970 YP_002973736.1 CDS Rpic12D_5266 NC_012849.1 153697 153834 D hypothetical protein 153697..153834 Ralstonia pickettii 12D 8007971 YP_002973737.1 CDS Rpic12D_5267 NC_012849.1 153859 154146 R hypothetical protein complement(153859..154146) Ralstonia pickettii 12D 8007972 YP_002973738.1 CDS Rpic12D_5268 NC_012849.1 154267 154956 R KEGG: bpy:Bphyt_7370 hypothetical protein; hypothetical protein complement(154267..154956) Ralstonia pickettii 12D 8007973 YP_002973739.1 CDS Rpic12D_5269 NC_012849.1 154967 155698 R KEGG: bvi:Bcep1808_6926 hypothetical protein; hypothetical protein complement(154967..155698) Ralstonia pickettii 12D 8007974 YP_002973740.1 CDS Rpic12D_5270 NC_012849.1 155709 155801 R hypothetical protein complement(155709..155801) Ralstonia pickettii 12D 8007975 YP_002973741.1 CDS Rpic12D_5271 NC_012849.1 155858 156241 R PFAM: protein of unknown function DUF583; KEGG: bac:BamMC406_6794 hypothetical protein; hypothetical protein complement(155858..156241) Ralstonia pickettii 12D 8007976 YP_002973742.1 CDS Rpic12D_5272 NC_012849.1 156252 156932 R KEGG:.; hypothetical protein complement(156252..156932) Ralstonia pickettii 12D 8007977 YP_002973743.1 CDS Rpic12D_5273 NC_012849.1 157126 157713 R KEGG: rme:Rmet_6223 hypothetical protein; hypothetical protein complement(157126..157713) Ralstonia pickettii 12D 8007978 YP_002973744.1 CDS Rpic12D_5274 NC_012849.1 158354 158671 D KEGG: rme:Rmet_6222 hypothetical protein; hypothetical protein 158354..158671 Ralstonia pickettii 12D 8007979 YP_002973745.1 CDS Rpic12D_5275 NC_012849.1 158623 159900 D KEGG: reh:PHG292 hypothetical protein; hypothetical protein 158623..159900 Ralstonia pickettii 12D 8007980 YP_002973746.1 CDS Rpic12D_5276 NC_012849.1 160022 161434 D KEGG: rme:Rmet_6220 DNA repair exonuclease-like protein; DNA repair exonuclease-like protein 160022..161434 Ralstonia pickettii 12D 8007981 YP_002973747.1 CDS Rpic12D_5277 NC_012849.1 161579 162091 D KEGG: reh:PHG290 hypothetical protein; hypothetical protein 161579..162091 Ralstonia pickettii 12D 8007982 YP_002973748.1 CDS Rpic12D_5278 NC_012849.1 162073 164397 D KEGG: reh:PHG289 hypothetical protein; hypothetical protein 162073..164397 Ralstonia pickettii 12D 8007983 YP_002973749.1 CDS Rpic12D_5279 NC_012849.1 164490 164735 D KEGG: cti:pRALTA_0151 hypothetical protein; hypothetical protein 164490..164735 Ralstonia pickettii 12D 8007984 YP_002973750.1 CDS Rpic12D_5280 NC_012849.1 164893 167826 D PFAM: transposase Tn3 family protein; KEGG: cti:pRALTA_0655 transposase, Tn3 family; transposase Tn3 family protein 164893..167826 Ralstonia pickettii 12D 8007985 YP_002973751.1 CDS Rpic12D_5281 NC_012849.1 167926 168888 R PFAM: integrase family protein; KEGG: cti:pRALTA_0656 putative cointegrate resolution protein S / recombinase; integrase family protein complement(167926..168888) Ralstonia pickettii 12D 8007986 YP_002973752.1 CDS Rpic12D_5282 NC_012849.1 168913 170841 R PFAM: iron permease FTR1; cytochrome c class I; KEGG: rme:Rmet_5945 iron permease FTR1; iron permease FTR1 complement(168913..170841) Ralstonia pickettii 12D 8007987 YP_002973753.1 CDS Rpic12D_5283 NC_012849.1 170986 171417 R KEGG: grail3.3073000201; .; TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR; transcriptional regulator, MerR family complement(170986..171417) Ralstonia pickettii 12D 8007988 YP_002973754.1 CDS Rpic12D_5284 NC_012849.1 171505 173907 D TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: ajs:Ajs_1242 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 171505..173907 Ralstonia pickettii 12D 8007989 YP_002973755.1 CDS Rpic12D_5285 NC_012849.1 173904 174509 D PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: shn:Shewana3_4320 signal peptidase II; phosphoesterase PA-phosphatase related 173904..174509 Ralstonia pickettii 12D 8007782 YP_002973756.1 CDS Rpic12D_5286 NC_012849.1 174561 174899 R KEGG: rso:RS05404 putative signal peptide protein; putative signal peptide protein complement(174561..174899) Ralstonia pickettii 12D 8007783 YP_002973757.1 CDS Rpic12D_5287 NC_012849.1 174896 178063 R TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: rso:RS05405 cation efflux system transmembrane protein; heavy metal efflux pump, CzcA family complement(174896..178063) Ralstonia pickettii 12D 8007784 YP_002973758.1 CDS Rpic12D_5288 NC_012849.1 178060 179610 R TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: reh:H16_A2186 cobalt-zinc-cadmium resistance membrane-fusion protein; efflux transporter, RND family, MFP subunit complement(178060..179610) Ralstonia pickettii 12D 8007785 YP_002973759.1 CDS Rpic12D_5289 NC_012849.1 179607 180911 R KEGG: rme:Rmet_6134 outer membrane efflux protein; outer membrane efflux protein complement(179607..180911) Ralstonia pickettii 12D 8007786 YP_002973760.1 CDS Rpic12D_5290 NC_012849.1 180983 181276 R KEGG: rso:RS05408 hypothetical protein; hypothetical protein complement(180983..181276) Ralstonia pickettii 12D 8007787 YP_002973761.1 CDS Rpic12D_5291 NC_012849.1 181553 181753 R KEGG: reh:H16_B1270 hypothetical membrane associated protein; hypothetical protein complement(181553..181753) Ralstonia pickettii 12D 8007788 YP_002973762.1 CDS Rpic12D_5292 NC_012849.1 182360 182860 R KEGG: bvi:Bcep1808_7265 hypothetical protein; hypothetical protein complement(182360..182860) Ralstonia pickettii 12D 8007789 YP_002973763.1 CDS Rpic12D_5293 NC_012849.1 183046 185499 D KEGG: reu:Reut_C6196 ATPase, E1-E2 type:copper-translocating P-type ATPase:heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; YHS domain protein; Haloacid dehalogenase domain protein hydrolase; SMART: TRASH domain protein; heavy metal translocating P-type ATPase 183046..185499 Ralstonia pickettii 12D 8007790 YP_002973764.1 CDS Rpic12D_5294 NC_012849.1 185496 185714 D hypothetical protein 185496..185714 Ralstonia pickettii 12D 8007791 YP_002973765.1 CDS Rpic12D_5295 NC_012849.1 185729 186028 D KEGG: bvi:Bcep1808_7285 YHS domain-containing protein; YHS domain-containing protein 185729..186028 Ralstonia pickettii 12D 8007792 YP_002973766.1 CDS Rpic12D_5296 NC_012849.1 186073 186324 D KEGG: reh:H16_A1977 hypothetical protein; hypothetical protein 186073..186324 Ralstonia pickettii 12D 8007793 YP_002973767.1 CDS Rpic12D_5297 NC_012849.1 186327 186989 D KEGG: reh:H16_A1978 hypothetical protein; hypothetical protein 186327..186989 Ralstonia pickettii 12D 8007794 YP_002973768.1 CDS Rpic12D_5298 NC_012849.1 187405 189288 R KEGG: ajs:Ajs_1470 hypothetical protein; hypothetical protein complement(187405..189288) Ralstonia pickettii 12D 8007795 YP_002973769.1 CDS Rpic12D_5299 NC_012849.1 189475 189720 R KEGG: dar:Daro_2269 hypothetical protein; hypothetical protein complement(189475..189720) Ralstonia pickettii 12D 8007796 YP_002973770.1 CDS Rpic12D_5300 NC_012849.1 190211 190435 D KEGG: smd:Smed_0214 hypothetical protein; hypothetical protein 190211..190435 Ralstonia pickettii 12D 8007797 YP_002973771.1 CDS Rpic12D_5301 NC_012849.1 190475 191248 D KEGG: vpa:VPA0557 hypothetical protein; hypothetical protein 190475..191248 Ralstonia pickettii 12D 8007798 YP_002973772.1 CDS Rpic12D_5302 NC_012849.1 191245 191949 D PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pca:Pcar_2375 ABC-type transport system, ATPase component; ABC transporter 191245..191949 Ralstonia pickettii 12D 8007799 YP_002973773.1 CDS Rpic12D_5303 NC_012849.1 191946 194438 D PFAM: protein of unknown function DUF214; KEGG: pca:Pcar_2373 ABC-type transport system, permease component; hypothetical protein 191946..194438 Ralstonia pickettii 12D 8007800 YP_002973774.1 CDS Rpic12D_5304 NC_012849.1 194431 195576 D KEGG: vpa:VPA0561 hypothetical protein; hypothetical protein 194431..195576 Ralstonia pickettii 12D 8007801 YP_002973775.1 CDS Rpic12D_5305 NC_012849.1 195673 197370 D PFAM: ABC-1 domain protein; KEGG: bvi:Bcep1808_7271 2-octaprenylphenol hydroxylase; ABC transporter 195673..197370 Ralstonia pickettii 12D 8007802 YP_002973776.1 CDS Rpic12D_5306 NC_012849.1 197421 198605 R catalyzes the formation of S-adenosylmethionine from methionine and ATP; S-adenosylmethionine synthetase complement(197421..198605) Ralstonia pickettii 12D 8007803 YP_002973777.1 CDS Rpic12D_5307 NC_012849.1 198860 199483 D PFAM: LemA family protein; KEGG: reu:Reut_C6198 hypothetical protein; LemA family protein 198860..199483 Ralstonia pickettii 12D 8007804 YP_002973778.1 CDS Rpic12D_5308 NC_012849.1 199480 200361 D PFAM: protein of unknown function DUF477; KEGG: reh:H16_A2010 beta-propeller domains of methanol dehydrogenase-type (homolog); hypothetical protein 199480..200361 Ralstonia pickettii 12D 8007805 YP_002973779.1 CDS Rpic12D_5309 NC_012849.1 200361 200861 D PFAM: protein of unknown function DUF477; KEGG: reu:Reut_C6200 hypothetical protein; hypothetical protein 200361..200861 Ralstonia pickettii 12D 8007806 YP_002973780.1 CDS Rpic12D_5310 NC_012849.1 200913 201389 D KEGG: ajs:Ajs_1493 hypothetical protein; hypothetical protein 200913..201389 Ralstonia pickettii 12D 8007807 YP_002973781.1 CDS Rpic12D_5311 NC_012849.1 201546 201794 R KEGG: rme:Rmet_0477 hypothetical protein; hypothetical protein complement(201546..201794) Ralstonia pickettii 12D 8007808 YP_002973782.1 CDS Rpic12D_5312 NC_012849.1 202143 203003 D PFAM: protein of unknown function DUF344; KEGG: ajs:Ajs_2697 hypothetical protein; hypothetical protein 202143..203003 Ralstonia pickettii 12D 8007809 YP_002973783.1 CDS Rpic12D_5313 NC_012849.1 203080 203685 D KEGG: ajs:Ajs_2687 hypothetical protein; hypothetical protein 203080..203685 Ralstonia pickettii 12D 8007810 YP_002973784.1 CDS Rpic12D_5314 NC_012849.1 203798 205888 R KEGG: reu:Reut_C6194 FtsH-2 peptidase; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; peptidase M41 FtsH extracellular; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH complement(203798..205888) Ralstonia pickettii 12D 8007811 YP_002973785.1 CDS Rpic12D_5316 NC_012849.1 206271 207164 R PFAM: Integrase catalytic region; KEGG: rme:Rmet_6074 integrase, catalytic region; Integrase catalytic region complement(206271..207164) Ralstonia pickettii 12D 8007813 YP_002973786.1 CDS Rpic12D_5317 NC_012849.1 207161 207457 R PFAM: transposase IS3/IS911 family protein; KEGG: rme:Rmet_6073 transposase IS3/IS911; transposase IS3/IS911 family protein complement(207161..207457) Ralstonia pickettii 12D 8007814 YP_002973787.1 CDS Rpic12D_5318 NC_012849.1 209144 209521 D KEGG: lch:Lcho_0146 hypothetical protein; hypothetical protein 209144..209521 Ralstonia pickettii 12D 8007815 YP_002973788.1 CDS Rpic12D_5319 NC_012849.1 209775 210068 D PFAM: Heavy metal transport/detoxification protein; KEGG: ajs:Ajs_1492 heavy metal transport/detoxification protein; Heavy metal transport/detoxification protein 209775..210068 Ralstonia pickettii 12D 8007816 YP_002973789.1 CDS Rpic12D_5320 NC_012849.1 210142 210456 D KEGG: bph:Bphy_6005 hypothetical protein; hypothetical protein 210142..210456 Ralstonia pickettii 12D 8007817 YP_002973790.1 CDS Rpic12D_5321 NC_012849.1 210480 211145 D KEGG: pzu:PHZ_p0147 protein-S-isoprenylcysteine methyltransferase; protein-S-isoprenylcysteine methyltransferase 210480..211145 Ralstonia pickettii 12D 8007818 YP_002973791.1 CDS Rpic12D_5322 NC_012849.1 211162 212526 D PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: ajs:Ajs_2691 beta-lactamase domain-containing protein; beta-lactamase domain protein 211162..212526 Ralstonia pickettii 12D 8007819 YP_002973792.1 CDS Rpic12D_5323 NC_012849.1 212523 214037 D catalyzes the formation of thymine and 2-deoxy-alpha-D-ribose 1-phosphate from thymidine; thymidine phosphorylase 212523..214037 Ralstonia pickettii 12D 8007820 YP_002973793.1 CDS Rpic12D_5324 NC_012849.1 214034 214939 D Catalyzes the formation of PRPP from ATP and ribose 5-phosphate; phosphoribosylpyrophosphate synthetase 214034..214939 Ralstonia pickettii 12D 8007821 YP_002973794.1 CDS Rpic12D_5325 NC_012849.1 214936 215085 D hypothetical protein 214936..215085 Ralstonia pickettii 12D 8007822 YP_002973795.1 CDS Rpic12D_5327 NC_012849.1 215473 216342 R PFAM: Integrase catalytic region; KEGG: mca:MCA0907 ISMca2, transposase, OrfB; Integrase catalytic region complement(215473..216342) Ralstonia pickettii 12D 8007824 YP_002973796.1 CDS Rpic12D_5328 NC_012849.1 216339 216671 R PFAM: transposase IS3/IS911 family protein; KEGG: mca:MCA0906 ISMca2, transposase, OrfA; transposase IS3/IS911 family protein complement(216339..216671) Ralstonia pickettii 12D 8007825 YP_002973797.1 CDS Rpic12D_5329 NC_012849.1 217736 218386 D KEGG: pna:Pnap_4542 hypothetical protein; hypothetical protein 217736..218386 Ralstonia pickettii 12D 8007826 YP_002973798.1 CDS Rpic12D_5330 NC_012849.1 218383 220827 D TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: rpt:Rpal_1042 copper-translocating P-type ATPase; heavy metal translocating P-type ATPase 218383..220827 Ralstonia pickettii 12D 8007827 YP_002973799.1 CDS Rpic12D_5331 NC_012849.1 220835 222142 D PFAM: major facilitator superfamily MFS_1; KEGG: xau:Xaut_4848 major facilitator transporter; major facilitator superfamily MFS_1 220835..222142 Ralstonia pickettii 12D 8007828 YP_002973800.1 CDS Rpic12D_5332 NC_012849.1 222097 222672 R hypothetical protein complement(222097..222672) Ralstonia pickettii 12D 8007829 YP_002973801.1 CDS Rpic12D_5333 NC_012849.1 223212 223598 D PFAM: copper resistance protein CopC; KEGG: reh:H16_B2183 copper resistance protein C; copper resistance protein CopC 223212..223598 Ralstonia pickettii 12D 8007830 YP_002973802.1 CDS Rpic12D_5334 NC_012849.1 223721 225118 R KEGG: rso:RSp0654 two component sensor histidine kinase transcription regulator protein; TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; heavy metal sensor signal transduction histidine kinase complement(223721..225118) Ralstonia pickettii 12D 8007831 YP_002973803.1 CDS Rpic12D_5335 NC_012849.1 225118 225804 R KEGG: rso:RSp0655 two component response regulator transcription regulator protein; TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; two component heavy metal response transcriptional regulator, winged helix family complement(225118..225804) Ralstonia pickettii 12D 8007832 YP_002973804.1 CDS Rpic12D_5336 NC_012849.1 225976 227871 D TIGRFAM: copper-resistance protein, CopA family; PFAM: multicopper oxidase type 3; multicopper oxidase type 1; multicopper oxidase type 2; KEGG: rso:RSp0656 copper resistance transmembrane protein; copper-resistance protein, CopA family 225976..227871 Ralstonia pickettii 12D 8007833 YP_002973805.1 CDS Rpic12D_5337 NC_012849.1 227871 228845 D PFAM: copper resistance B precursor; KEGG: rso:RSp0657 copper resistance protein B; copper resistance B precursor 227871..228845 Ralstonia pickettii 12D 8007834 YP_002973806.1 CDS Rpic12D_5338 NC_012849.1 228878 229264 D PFAM: copper resistance protein CopC; KEGG: rme:Rmet_6114 copper resistance protein CopC; copper resistance protein CopC 228878..229264 Ralstonia pickettii 12D 8007835 YP_002973807.1 CDS Rpic12D_5339 NC_012849.1 229269 230198 D PFAM: copper resistance D domain protein; KEGG: rso:RSp0659 copper resistance D transmembrane protein; copper resistance D domain protein 229269..230198 Ralstonia pickettii 12D 8007836 YP_002973808.1 CDS Rpic12D_5340 NC_012849.1 230227 230718 D PFAM: protein of unknown function DUF411; KEGG: bps:BPSS2003 periplasmic protein; hypothetical protein 230227..230718 Ralstonia pickettii 12D 8007837 YP_002973809.1 CDS Rpic12D_5341 NC_012849.1 230762 232027 R KEGG: rme:Rmet_6120 hypothetical protein; hypothetical protein complement(230762..232027) Ralstonia pickettii 12D 8007838 YP_002973810.1 CDS Rpic12D_5342 NC_012849.1 232372 233205 R KEGG: cti:pRALTA_0656 putative cointegrate resolution protein S / recombinase; putative cointegrate resolution protein S / recombinase complement(232372..233205) Ralstonia pickettii 12D 8007839 YP_002973811.1 CDS Rpic12D_5343 NC_012849.1 233324 233647 D SMART: regulatory protein ArsR; KEGG: rso:RSp1129 putative arsenical resistance operon repressor transcription regulator protein; putative transcriptional regulator, ArsR family 233324..233647 Ralstonia pickettii 12D 8007840 YP_002973812.1 CDS Rpic12D_5344 NC_012849.1 233661 234143 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: reh:H16_A2179 lactoylglutathione lyase; Glyoxalase/bleomycin resistance protein/dioxygenase 233661..234143 Ralstonia pickettii 12D 8007841 YP_002973813.1 CDS Rpic12D_5345 NC_012849.1 234154 234648 D PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: cti:pRALTA_0651 putative arsenate reductase (arsenical pump modifier)(low molecular weight phosphotyrosine protein phosphatase); Protein-tyrosine phosphatase, low molecular weight 234154..234648 Ralstonia pickettii 12D 8007842 YP_002973814.1 CDS Rpic12D_5346 NC_012849.1 234663 235157 D PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: rso:RSp1128 putative arsenate reductase (arsenical PUMP modifier) protein; Protein-tyrosine phosphatase, low molecular weight 234663..235157 Ralstonia pickettii 12D 8007843 YP_002973815.1 CDS Rpic12D_5347 NC_012849.1 235163 235867 D PFAM: major intrinsic protein; KEGG: rso:RS05492 transmembrane ABC transporter protein; major intrinsic protein 235163..235867 Ralstonia pickettii 12D 8007844 YP_002973816.1 CDS Rpic12D_5348 NC_012849.1 235876 236319 D PFAM: GCN5-related N-acetyltransferase; KEGG: ade:Adeh_1022 tyrosine phosphatase; GCN5-related N-acetyltransferase 235876..236319 Ralstonia pickettii 12D 8007845 YP_002973817.1 CDS Rpic12D_5349 NC_012849.1 236529 237713 D PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: reu:Reut_C6190 major facilitator transporter; major facilitator superfamily MFS_1 236529..237713 Ralstonia pickettii 12D 8007846 YP_002973818.1 CDS Rpic12D_5350 NC_012849.1 237785 239707 R PFAM: iron permease FTR1; cytochrome c class I; KEGG: rme:Rmet_5945 iron permease FTR1; iron permease FTR1 complement(237785..239707) Ralstonia pickettii 12D 8007847 YP_002973819.1 CDS Rpic12D_5351 NC_012849.1 239868 240302 R KEGG: grail3.3073000201; .; TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR; transcriptional regulator, MerR family complement(239868..240302) Ralstonia pickettii 12D 8007848 YP_002973820.1 CDS Rpic12D_5352 NC_012849.1 240388 242787 D TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: rme:Rmet_5947 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 240388..242787 Ralstonia pickettii 12D 8007849 YP_002973821.1 CDS Rpic12D_5353 NC_012849.1 242784 243857 D KEGG: shn:Shewana3_4320 signal peptidase II; TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; lipoprotein signal peptidase 242784..243857 Ralstonia pickettii 12D 8007850 YP_002973822.1 CDS Rpic12D_5354 NC_012849.1 243913 244251 R KEGG: rso:RS05404 putative signal peptide protein; putative signal peptide protein complement(243913..244251) Ralstonia pickettii 12D 8007851 YP_002973823.1 CDS Rpic12D_5355 NC_012849.1 244248 247418 R TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: rso:RS05405 cation efflux system transmembrane protein; heavy metal efflux pump, CzcA family complement(244248..247418) Ralstonia pickettii 12D 8007852 YP_002973824.1 CDS Rpic12D_5356 NC_012849.1 247415 248947 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rso:RS05406 putative cation efflux system transmembrane protein; efflux transporter, RND family, MFP subunit complement(247415..248947) Ralstonia pickettii 12D 8007853 YP_002973825.1 CDS Rpic12D_5357 NC_012849.1 248944 250245 R PFAM: outer membrane efflux protein; KEGG: reh:H16_A2185 cobalt-zinc-cadmium resistance outer membrane porin; outer membrane efflux protein complement(248944..250245) Ralstonia pickettii 12D 8007854 YP_002973826.1 CDS Rpic12D_5358 NC_012849.1 250316 250603 R KEGG: reh:H16_A2184 hypothetical membrane protein; hypothetical protein complement(250316..250603) Ralstonia pickettii 12D 8007855 YP_002973827.1 CDS Rpic12D_5359 NC_012849.1 250966 251394 D KEGG: mpo:Mpop_2538 transcriptional regulator, MerR family; TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR; transcriptional regulator, MerR family 250966..251394 Ralstonia pickettii 12D 8007856 YP_002973828.1 CDS Rpic12D_5360 NC_012849.1 251407 253800 D KEGG: rme:Rmet_6119 heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; YHS domain protein; Haloacid dehalogenase domain protein hydrolase; SMART: TRASH domain protein; heavy metal translocating P-type ATPase 251407..253800 Ralstonia pickettii 12D 8007857 YP_002973829.1 CDS Rpic12D_5361 NC_012849.1 254424 254654 D KEGG: azo:azo3114 hypothetical secreted protein; hypothetical protein 254424..254654 Ralstonia pickettii 12D 8007858 YP_002973830.1 CDS Rpic12D_5362 NC_012849.1 254788 255093 D KEGG: bpt:Bpet4577 hypothetical protein; hypothetical protein 254788..255093 Ralstonia pickettii 12D 8007859 YP_002973831.1 CDS Rpic12D_5363 NC_012849.1 255142 255387 D KEGG: bpt:Bpet4578 hypothetical protein; hypothetical protein 255142..255387 Ralstonia pickettii 12D 8007860 YP_002973832.1 CDS Rpic12D_5364 NC_012849.1 255546 256208 D PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: nha:Nham_4413 hypothetical protein; Isoprenylcysteine carboxyl methyltransferase 255546..256208 Ralstonia pickettii 12D 8007861 YP_002973833.1 CDS Rpic12D_5365 NC_012849.1 256267 256596 D PFAM: nitrogen regulatory protein P-II; KEGG: pol:Bpro_3498 nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 256267..256596 Ralstonia pickettii 12D 8007862 YP_002973834.1 CDS Rpic12D_5366 NC_012849.1 256737 258683 D PFAM: Thioredoxin domain; KEGG: reh:H16_A3455 thiol:disulfide interchange protein; Protein-disulfide reductase 256737..258683 Ralstonia pickettii 12D 8007863 YP_002973835.1 CDS Rpic12D_5367 NC_012849.1 258763 259437 R PFAM: cytochrome c class I; KEGG: pol:Bpro_3501 cytochrome c, class I; cytochrome c class I complement(258763..259437) Ralstonia pickettii 12D 8007864 YP_002973836.1 CDS Rpic12D_5368 NC_012849.1 259484 259846 R PFAM: Secreted repeat of unknown function; KEGG: bac:BamMC406_0743 hypothetical protein; hypothetical protein complement(259484..259846) Ralstonia pickettii 12D 8007865 YP_002973837.1 CDS Rpic12D_5369 NC_012849.1 260010 260348 D hypothetical protein 260010..260348 Ralstonia pickettii 12D 8007866 YP_002973838.1 CDS Rpic12D_5370 NC_012849.1 261262 262128 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rme:Rmet_6131 methyltransferase type 11; Methyltransferase type 11 261262..262128 Ralstonia pickettii 12D 8007867 YP_002973839.1 CDS Rpic12D_5371 NC_012849.1 262197 262592 D PFAM: GtrA family protein; KEGG: rme:Rmet_6129 GtrA-like protein; GtrA family protein 262197..262592 Ralstonia pickettii 12D 8007868 YP_002973840.1 CDS Rpic12D_5372 NC_012849.1 262670 263077 D hypothetical protein 262670..263077 Ralstonia pickettii 12D 8007869 YP_002973841.1 CDS Rpic12D_5373 NC_012849.1 263223 263477 D hypothetical protein 263223..263477 Ralstonia pickettii 12D 8007870 YP_002973842.1 CDS Rpic12D_5374 NC_012849.1 263494 263907 R KEGG: rme:Rmet_5976 hypothetical protein; hypothetical protein complement(263494..263907) Ralstonia pickettii 12D 8007871 YP_002973843.1 CDS Rpic12D_5375 NC_012849.1 264055 264975 R PFAM: copper resistance B precursor; KEGG: tbd:Tbd_1325 copper resistance protein B; copper resistance B precursor complement(264055..264975) Ralstonia pickettii 12D 8007872 YP_002973844.1 CDS Rpic12D_5377 NC_012849.1 266864 266986 R hypothetical protein complement(266864..266986) Ralstonia pickettii 12D 8007874 YP_002973845.1 CDS Rpic12D_5378 NC_012849.1 267063 269348 D TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: bac:BamMC406_3390 heavy metal translocating P-type ATPase; heavy metal translocating P-type ATPase 267063..269348 Ralstonia pickettii 12D 8007875 YP_002973846.1 CDS Rpic12D_5379 NC_012849.1 269432 270340 D KEGG: bid:Bind_3435 hypothetical protein; hypothetical protein 269432..270340 Ralstonia pickettii 12D 8007876 YP_002973847.1 CDS Rpic12D_5380 NC_012849.1 270368 270889 D PFAM: FMN-binding domain protein; KEGG: reu:Reut_A1179 FMN-binding; FMN-binding domain protein 270368..270889 Ralstonia pickettii 12D 8007877 YP_002973848.1 CDS Rpic12D_5381 NC_012849.1 270886 271734 D PFAM: ApbE family lipoprotein; KEGG: reu:Reut_A1180 ApbE-like lipoprotein; ApbE family lipoprotein 270886..271734 Ralstonia pickettii 12D 8007878 YP_002973849.1 CDS Rpic12D_5382 NC_012849.1 271731 272222 D KEGG: rso:RSc0612 hypothetical protein; hypothetical protein 271731..272222 Ralstonia pickettii 12D 8007879 YP_002973850.1 CDS Rpic12D_5383 NC_012849.1 272353 272586 R KEGG: rme:Rmet_6121 hypothetical protein; hypothetical protein complement(272353..272586) Ralstonia pickettii 12D 8007880 YP_002973851.1 CDS Rpic12D_5384 NC_012849.1 272718 273044 R PFAM: protein of unknown function DUF326; KEGG: azo:azo1773 hypothetical protein; hypothetical protein complement(272718..273044) Ralstonia pickettii 12D 8007881 YP_002978417.1 CDS Rpic12D_5385 NC_012851.1 14 397 R KEGG: xac:XAC2421 hypothetical protein; hypothetical protein complement(14..397) Ralstonia pickettii 12D 8016025 YP_002978418.1 CDS Rpic12D_5386 NC_012851.1 459 656 R hypothetical protein complement(459..656) Ralstonia pickettii 12D 8015958 YP_002978419.1 CDS Rpic12D_5387 NC_012851.1 707 1012 R KEGG: bpy:Bphyt_7294 hypothetical protein; hypothetical protein complement(707..1012) Ralstonia pickettii 12D 8015959 YP_002978420.1 CDS Rpic12D_5388 NC_012851.1 1064 1303 R KEGG: bac:BamMC406_6355 hypothetical protein; hypothetical protein complement(1064..1303) Ralstonia pickettii 12D 8015960 YP_002978421.1 CDS Rpic12D_5389 NC_012851.1 1343 1984 R KEGG: sgl:SG0619 hypothetical protein; hypothetical protein complement(1343..1984) Ralstonia pickettii 12D 8015961 YP_002978422.1 CDS Rpic12D_5390 NC_012851.1 2155 2808 R KEGG: swi:Swit_5119 hypothetical protein; hypothetical protein complement(2155..2808) Ralstonia pickettii 12D 8015962 YP_002978423.1 CDS Rpic12D_5391 NC_012851.1 3587 4342 D PFAM: initiator RepB protein; KEGG: ppd:Ppro_3857 initiator RepB protein; initiator RepB protein 3587..4342 Ralstonia pickettii 12D 8015963 YP_002978424.1 CDS Rpic12D_5392 NC_012851.1 4753 5175 R hypothetical protein complement(4753..5175) Ralstonia pickettii 12D 8015964 YP_002978425.1 CDS Rpic12D_5393 NC_012851.1 5153 5881 R KEGG: bch:Bcen2424_0451 hypothetical protein; hypothetical protein complement(5153..5881) Ralstonia pickettii 12D 8015965 YP_002978426.1 CDS Rpic12D_5394 NC_012851.1 7806 9545 D KEGG: kpe:KPK_1773 type IV conjugative transfer system coupling protein TraD; Type IV secretory pathway VirB4 protein-like protein 7806..9545 Ralstonia pickettii 12D 8015966 YP_002978427.1 CDS Rpic12D_5395 NC_012851.1 9571 9726 D hypothetical protein 9571..9726 Ralstonia pickettii 12D 8015967 YP_002978428.1 CDS Rpic12D_5396 NC_012851.1 10019 10822 R KEGG: bte:BTH_I2729 hypothetical protein; hypothetical protein complement(10019..10822) Ralstonia pickettii 12D 8015968 YP_002978429.1 CDS Rpic12D_5397 NC_012851.1 10834 11058 R hypothetical protein complement(10834..11058) Ralstonia pickettii 12D 8015969 YP_002978430.1 CDS Rpic12D_5398 NC_012851.1 11122 11355 R KEGG: ajs:Ajs_4207 hypothetical protein; hypothetical protein complement(11122..11355) Ralstonia pickettii 12D 8015970 YP_002978431.1 CDS Rpic12D_5399 NC_012851.1 11453 13324 R PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; KEGG: aav:Aave_0680 ParB domain protein nuclease; ParB domain protein nuclease complement(11453..13324) Ralstonia pickettii 12D 8015971 YP_002978432.1 CDS Rpic12D_5400 NC_012851.1 13390 14217 R PFAM: protein of unknown function DUF932; KEGG: ajs:Ajs_4210 hypothetical protein; hypothetical protein complement(13390..14217) Ralstonia pickettii 12D 8015972 YP_002978433.1 CDS Rpic12D_5401 NC_012851.1 14413 14976 R hypothetical protein complement(14413..14976) Ralstonia pickettii 12D 8015973 YP_002978434.1 CDS Rpic12D_5402 NC_012851.1 14973 15569 R hypothetical protein complement(14973..15569) Ralstonia pickettii 12D 8015974 YP_002978435.1 CDS Rpic12D_5403 NC_012851.1 15626 15832 D KEGG: mpt:Mpe_A2348 hypothetical protein; hypothetical protein 15626..15832 Ralstonia pickettii 12D 8015975 YP_002978436.1 CDS Rpic12D_5404 NC_012851.1 15937 16284 R KEGG: ngk:NGK_p0010 protein A; hypothetical protein complement(15937..16284) Ralstonia pickettii 12D 8015976 YP_002978437.1 CDS Rpic12D_5405 NC_012851.1 16310 16543 R hypothetical protein complement(16310..16543) Ralstonia pickettii 12D 8015977 YP_002978438.1 CDS Rpic12D_5406 NC_012851.1 16600 16809 R KEGG: bph:Bphy_7555 hypothetical protein; hypothetical protein complement(16600..16809) Ralstonia pickettii 12D 8015978 YP_002978439.1 CDS Rpic12D_5407 NC_012851.1 17119 17685 R KEGG: afe:Lferr_1736 phosphatidylserine/phosphatidylglycerophosphate/cardioli pin synthase and related enzyme; phosphatidylserine/phosphatidylglycerophosphate/ cardioli pin synthase and related enzyme complement(17119..17685) Ralstonia pickettii 12D 8015979 YP_002978440.1 CDS Rpic12D_5408 NC_012851.1 17682 17876 R hypothetical protein complement(17682..17876) Ralstonia pickettii 12D 8015980 YP_002978441.1 CDS Rpic12D_5409 NC_012851.1 17929 18177 R hypothetical protein complement(17929..18177) Ralstonia pickettii 12D 8015981 YP_002978442.1 CDS Rpic12D_5410 NC_012851.1 18174 19427 R PFAM: TraB family protein; KEGG: nha:Nham_4542 hypothetical protein; conjugal transfer protein TraB complement(18174..19427) Ralstonia pickettii 12D 8015982 YP_002978443.1 CDS Rpic12D_5412 NC_012851.1 19841 21184 R PFAM: conjugation TrbI family protein; KEGG: rme:Rmet_6299 conjugation TrbI-like protein; conjugation TrbI family protein complement(19841..21184) Ralstonia pickettii 12D 8015984 YP_002978444.1 CDS Rpic12D_5413 NC_012851.1 21184 22137 R PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: pol:Bpro_5236 conjugal transfer protein TrbG/VirB9/CagX; Conjugal transfer protein TrbG/VirB9/CagX complement(21184..22137) Ralstonia pickettii 12D 8015985 YP_002978445.1 CDS Rpic12D_5414 NC_012851.1 22134 22862 R KEGG: rfr:Rfer_4254 type IV secretory pathway component VirB8-like; hypothetical protein complement(22134..22862) Ralstonia pickettii 12D 8015986 YP_002978446.1 CDS Rpic12D_5415 NC_012851.1 22862 23878 R PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: pol:Bpro_5231 TrbL/VirB6 plasmid conjugal transfer protein; TrbL/VirB6 plasmid conjugal transfer protein complement(22862..23878) Ralstonia pickettii 12D 8015987 YP_002978447.1 CDS Rpic12D_5416 NC_012851.1 23883 24215 R hypothetical protein complement(23883..24215) Ralstonia pickettii 12D 8015988 YP_002978448.1 CDS Rpic12D_5417 NC_012851.1 24251 25162 R KEGG: tbd:Tbd_1819 hypothetical protein; hypothetical protein complement(24251..25162) Ralstonia pickettii 12D 8015989 YP_002978449.1 CDS Rpic12D_5418 NC_012851.1 25155 27833 R KEGG: rme:Rmet_6305 type IV secretory pathway VirB4 components-like protein; Type IV secretory pathway VirB4 protein-like protein complement(25155..27833) Ralstonia pickettii 12D 8015990 YP_002978450.1 CDS Rpic12D_5419 NC_012851.1 27827 28183 R PFAM: type IV secretory pathway VirB3 family protein; KEGG: rfr:Rfer_4261 hypothetical protein; type IV secretory pathway VirB3 family protein complement(27827..28183) Ralstonia pickettii 12D 8015991 YP_002978451.1 CDS Rpic12D_5420 NC_012851.1 28189 28605 R hypothetical protein complement(28189..28605) Ralstonia pickettii 12D 8015992 YP_002978452.1 CDS Rpic12D_5421 NC_012851.1 28623 29654 R PFAM: type II secretion system protein E; KEGG: rme:Rmet_6302 type II secretion system protein E; type II secretion system protein E complement(28623..29654) Ralstonia pickettii 12D 8015993 YP_002978453.1 CDS Rpic12D_5422 NC_012851.1 29647 30198 R PFAM: Lytic transglycosylase catalytic; KEGG: bvi:Bcep1808_1339 lytic transglycosylase, catalytic; Lytic transglycosylase catalytic complement(29647..30198) Ralstonia pickettii 12D 8015994 YP_002978454.1 CDS Rpic12D_5423 NC_012851.1 30195 30548 R hypothetical protein complement(30195..30548) Ralstonia pickettii 12D 8015995 YP_002978455.1 CDS Rpic12D_5424 NC_012851.1 30569 30961 R TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: rso:RSc0422 single-strand DNA-binding protein; single-strand binding protein complement(30569..30961) Ralstonia pickettii 12D 8015996 YP_002978456.1 CDS Rpic12D_5425 NC_012851.1 30998 31210 R hypothetical protein complement(30998..31210) Ralstonia pickettii 12D 8015997 YP_002978457.1 CDS Rpic12D_5426 NC_012851.1 31240 31473 R hypothetical protein complement(31240..31473) Ralstonia pickettii 12D 8015998 YP_002978458.1 CDS Rpic12D_5427 NC_012851.1 31631 32656 R PFAM: SCP-like extracellular; KEGG: bac:BamMC406_6555 SCP-like extracellular; SCP-like extracellular complement(31631..32656) Ralstonia pickettii 12D 8015999 YP_002978459.1 CDS Rpic12D_5428 NC_012851.1 32777 32938 D hypothetical protein 32777..32938 Ralstonia pickettii 12D 8016000 YP_002978460.1 CDS Rpic12D_5429 NC_012851.1 32962 33567 R KEGG: cti:pRALTA_0198 hypothetical protein; hypothetical protein complement(32962..33567) Ralstonia pickettii 12D 8016001 YP_002978461.1 CDS Rpic12D_5430 NC_012851.1 33591 34829 R KEGG: reh:PHG343 putative adhesin precursor; putative adhesin precursor complement(33591..34829) Ralstonia pickettii 12D 8016002 YP_002978462.1 CDS Rpic12D_5431 NC_012851.1 34841 35320 R KEGG: reh:PHG344 hypothetical protein; hypothetical protein complement(34841..35320) Ralstonia pickettii 12D 8016003 YP_002978463.1 CDS Rpic12D_5432 NC_012851.1 35352 35852 R KEGG: cti:pRALTA_0202 putative prepilin type IV pili (PilS homolog); putative prepilin type IV pili complement(35352..35852) Ralstonia pickettii 12D 8016004 YP_002978464.1 CDS Rpic12D_5433 NC_012851.1 35888 36928 R PFAM: type II secretion system protein; KEGG: reh:PHG347 putative component of type II secretion apparatus; type II secretion system protein complement(35888..36928) Ralstonia pickettii 12D 8016005 YP_002978465.1 CDS Rpic12D_5434 NC_012851.1 36925 38754 R PFAM: type II secretion system protein E; KEGG: cti:pRALTA_0205 putative type IV secretion apparatus, ATPase component (PilQ homolog); type II secretion system protein E complement(36925..38754) Ralstonia pickettii 12D 8016006 YP_002978466.1 CDS Rpic12D_5435 NC_012851.1 38754 40013 R KEGG: reh:PHG349 putative component of type II secretion apparatus; putative component of type II secretion apparatus complement(38754..40013) Ralstonia pickettii 12D 8016007 YP_002978467.1 CDS Rpic12D_5436 NC_012851.1 40016 40582 R TIGRFAM: type IV pilus biogenesis protein PilP; KEGG: cti:pRALTA_0207 conserved hypothetical protein; putative exported protein; type IV pilus biogenesis protein PilP complement(40016..40582) Ralstonia pickettii 12D 8016008 YP_002978468.1 CDS Rpic12D_5437 NC_012851.1 40600 42285 R KEGG: cti:pRALTA_0209 type IV secretion pathway, outer membrane lipoprotein, putative precursor (PilN homolog); type IV secretion pathway protein complement(40600..42285) Ralstonia pickettii 12D 8016009 YP_002978469.1 CDS Rpic12D_5438 NC_012851.1 42282 42506 R KEGG: cti:pRALTA_0210 conserved hypothetical protein; putative pilus-related protein (BfpG homolog); putative membrane protein; putative pilus-related protein complement(42282..42506) Ralstonia pickettii 12D 8016010 YP_002978470.1 CDS Rpic12D_5439 NC_012851.1 42911 43348 R PFAM: Lytic transglycosylase catalytic; KEGG: reh:PHG353 putative transglycosylase; Lytic transglycosylase catalytic complement(42911..43348) Ralstonia pickettii 12D 8016011 YP_002978471.1 CDS Rpic12D_5440 NC_012851.1 43345 43836 R KEGG: reh:PHG354 putative PilL-like protein; putative PilL-like protein complement(43345..43836) Ralstonia pickettii 12D 8016012 YP_002978472.1 CDS Rpic12D_5441 NC_012851.1 44358 44627 R KEGG: bph:Bphy_7127 hypothetical protein; hypothetical protein complement(44358..44627) Ralstonia pickettii 12D 8016013 YP_002978473.1 CDS Rpic12D_5442 NC_012851.1 44698 45111 D KEGG: psp:PSPPH_1393 repressor protein C2, putative; hypothetical protein 44698..45111 Ralstonia pickettii 12D 8016014 YP_002978474.1 CDS Rpic12D_5443 NC_012851.1 45283 45654 D KEGG: reu:Reut_A2380 peptidase S24, S26A and S26B; hypothetical protein 45283..45654 Ralstonia pickettii 12D 8016015 YP_002978475.1 CDS Rpic12D_5444 NC_012851.1 46079 46306 D hypothetical protein 46079..46306 Ralstonia pickettii 12D 8016016 YP_002978476.1 CDS Rpic12D_5445 NC_012851.1 46345 46584 R hypothetical protein complement(46345..46584) Ralstonia pickettii 12D 8016017 YP_002978477.1 CDS Rpic12D_5446 NC_012851.1 46581 46952 R KEGG: cti:RALTA_B1560 putative toxin of a toxin/antitoxin system, PemK-like; transcriptional modulator of MazE/toxin, MazF complement(46581..46952) Ralstonia pickettii 12D 8016018 YP_002978478.1 CDS Rpic12D_5447 NC_012851.1 46939 47169 R KEGG: cti:RALTA_B1559 putative antitoxin protein of the toxin/antitoxin system; putative antitoxin protein of the toxin/antitoxin system complement(46939..47169) Ralstonia pickettii 12D 8016019 YP_002978479.1 CDS Rpic12D_5448 NC_012851.1 47606 49339 D PFAM: integrase family protein; KEGG: bcj:pBCA090 putative integrase; integrase family protein 47606..49339 Ralstonia pickettii 12D 8016020 YP_002978480.1 CDS Rpic12D_5449 NC_012851.1 49643 50092 R hypothetical protein complement(49643..50092) Ralstonia pickettii 12D 8016021 YP_002978481.1 CDS Rpic12D_5450 NC_012851.1 50183 50482 R hypothetical protein complement(50183..50482) Ralstonia pickettii 12D 8016022 YP_002978482.1 CDS Rpic12D_5451 NC_012851.1 50610 50867 R hypothetical protein complement(50610..50867) Ralstonia pickettii 12D 8016023 YP_002978483.1 CDS Rpic12D_5452 NC_012851.1 50905 51333 R hypothetical protein complement(50905..51333) Ralstonia pickettii 12D 8016024 YP_002979559.1 CDS Rpic12D_4666 NC_012855.1 251 517 D hypothetical protein 251..517 Ralstonia pickettii 12D 8017392 YP_002979560.1 CDS Rpic12D_4667 NC_012855.1 514 1140 D hypothetical protein 514..1140 Ralstonia pickettii 12D 8017246 YP_002979561.1 CDS Rpic12D_4668 NC_012855.1 1197 2318 D PFAM: ATPase associated with various cellular activities AAA_5; KEGG: pol:Bpro_5501 ATPase associated with various cellular activities, AAA_5; ATPase associated with various cellular activities AAA_5 1197..2318 Ralstonia pickettii 12D 8017247 YP_002979562.1 CDS Rpic12D_4669 NC_012855.1 2429 2926 D hypothetical protein 2429..2926 Ralstonia pickettii 12D 8017248 YP_002979563.1 CDS Rpic12D_4670 NC_012855.1 2939 3994 D KEGG: pol:Bpro_5081 hypothetical protein; hypothetical protein 2939..3994 Ralstonia pickettii 12D 8017249 YP_002979564.1 CDS Rpic12D_4671 NC_012855.1 4010 4486 D TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: kpe:KPK_5229 single-stranded DNA-binding protein; single-strand binding protein 4010..4486 Ralstonia pickettii 12D 8017250 YP_002979565.1 CDS Rpic12D_4672 NC_012855.1 4596 4823 D hypothetical protein 4596..4823 Ralstonia pickettii 12D 8017251 YP_002979566.1 CDS Rpic12D_4673 NC_012855.1 5226 8075 D KEGG: rso:RSc2805 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; PFAM: ribonucleotide reductase large subunit; ATP-cone domain protein; Ribonucleotide reductase large subunit domain protein; ribonucleoside-diphosphate reductase, alpha subunit 5226..8075 Ralstonia pickettii 12D 8017252 YP_002979567.1 CDS Rpic12D_4674 NC_012855.1 8155 9141 D Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta 8155..9141 Ralstonia pickettii 12D 8017253 YP_002979568.1 CDS Rpic12D_4675 NC_012855.1 9659 9913 D KEGG: rme:Rmet_5461 hypothetical protein; hypothetical protein 9659..9913 Ralstonia pickettii 12D 8017254 YP_002979569.1 CDS Rpic12D_4676 NC_012855.1 9977 10630 D KEGG: mms:mma_1737 hypothetical protein; hypothetical protein 9977..10630 Ralstonia pickettii 12D 8017255 YP_002979570.1 CDS Rpic12D_4677 NC_012855.1 11281 11643 D SMART: helix-turn-helix domain protein; KEGG: hsm:HSM_0248 DNA-binding protein; XRE family transcriptional regulator 11281..11643 Ralstonia pickettii 12D 8017256 YP_002979571.1 CDS Rpic12D_4678 NC_012855.1 11640 12194 D PFAM: protein of unknown function DUF955; KEGG: par:Psyc_0986 neutral zinc metallopeptidase; hypothetical protein 11640..12194 Ralstonia pickettii 12D 8017257 YP_002979572.1 CDS Rpic12D_4679 NC_012855.1 12367 12495 D hypothetical protein 12367..12495 Ralstonia pickettii 12D 8017258 YP_002979573.1 CDS Rpic12D_4680 NC_012855.1 13043 13807 D hypothetical protein 13043..13807 Ralstonia pickettii 12D 8017259 YP_002979574.1 CDS Rpic12D_4681 NC_012855.1 14166 15182 D KEGG: net:Neut_1485 SppA protein; hypothetical protein 14166..15182 Ralstonia pickettii 12D 8017260 YP_002979575.1 CDS Rpic12D_4683 NC_012855.1 15859 15966 D hypothetical protein 15859..15966 Ralstonia pickettii 12D 8017387 YP_002979576.1 CDS Rpic12D_4684 NC_012855.1 16042 16266 R hypothetical protein complement(16042..16266) Ralstonia pickettii 12D 8017262 YP_002979577.1 CDS Rpic12D_4685 NC_012855.1 16424 16786 D KEGG: nha:Nham_4354 transposase IS3/IS911; transposase IS3/IS911 16424..16786 Ralstonia pickettii 12D 8017263 YP_002979578.1 CDS Rpic12D_4686 NC_012855.1 16783 17583 D PFAM: Integrase catalytic region; KEGG: gvi:gll2675 putative transposase; Integrase catalytic region 16783..17583 Ralstonia pickettii 12D 8017264 YP_002979579.1 CDS Rpic12D_4687 NC_012855.1 17660 18445 R PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: rme:Rmet_3364 IstB-like ATP-binding protein; IstB domain protein ATP-binding protein complement(17660..18445) Ralstonia pickettii 12D 8017265 YP_002979580.1 CDS Rpic12D_4688 NC_012855.1 18435 19961 R PFAM: Integrase catalytic region; KEGG: rme:Rmet_3365 integrase, catalytic region; Integrase catalytic region complement(18435..19961) Ralstonia pickettii 12D 8017266 YP_002979581.1 CDS Rpic12D_4689 NC_012855.1 20038 20316 D PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS; KEGG: rso:RS00711 putative HNS-like transcription regulator protein; histone family protein nucleoid-structuring protein H-NS 20038..20316 Ralstonia pickettii 12D 8017267 YP_002979582.1 CDS Rpic12D_4690 NC_012855.1 21919 22623 R KEGG: pol:Bpro_3832 lipid-transfer protein; Propanoyl-CoA C-acyltransferase complement(21919..22623) Ralstonia pickettii 12D 8017268 YP_002979583.1 CDS Rpic12D_4691 NC_012855.1 22649 24157 R PFAM: AMP-dependent synthetase and ligase; KEGG: rpd:RPD_3816 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(22649..24157) Ralstonia pickettii 12D 8017269 YP_002979584.1 CDS Rpic12D_4692 NC_012855.1 24161 24745 D PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: ppw:PputW619_3351 AraC family transcriptional regulator; AraC family transcriptional regulator 24161..24745 Ralstonia pickettii 12D 8017270 YP_002979585.1 CDS Rpic12D_4693 NC_012855.1 25515 25943 R PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bpy:Bphyt_1443 biopolymer transport protein ExbD/TolR; Biopolymer transport protein ExbD/TolR complement(25515..25943) Ralstonia pickettii 12D 8017271 YP_002979586.1 CDS Rpic12D_4694 NC_012855.1 25954 26379 R PFAM: Biopolymer transport protein ExbD/TolR; KEGG: bxe:Bxe_A2998 biopolymer transport protein ExbD/TolR; Biopolymer transport protein ExbD/TolR complement(25954..26379) Ralstonia pickettii 12D 8017272 YP_002979587.1 CDS Rpic12D_4695 NC_012855.1 26383 27294 R PFAM: MotA/TolQ/ExbB proton channel; KEGG: bxe:Bxe_A2999 biopolymer transport transmembrane protein, ExbB/TolQ; MotA/TolQ/ExbB proton channel complement(26383..27294) Ralstonia pickettii 12D 8017273 YP_002979588.1 CDS Rpic12D_4696 NC_012855.1 27374 28084 R TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: bxe:Bxe_A3000 TonB protein; TonB family protein complement(27374..28084) Ralstonia pickettii 12D 8017274 YP_002979589.1 CDS Rpic12D_4697 NC_012855.1 28283 28438 R KEGG: bpl:BURPS1106A_0312 hypothetical protein; hypothetical protein complement(28283..28438) Ralstonia pickettii 12D 8017275 YP_002979590.1 CDS Rpic12D_4698 NC_012855.1 29091 31772 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bcm:Bcenmc03_1726 TonB-dependent receptor; TonB-dependent receptor 29091..31772 Ralstonia pickettii 12D 8017276 YP_002979591.1 CDS Rpic12D_4699 NC_012855.1 32248 33585 R PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rca:Rcas_2074 amine oxidase; amine oxidase complement(32248..33585) Ralstonia pickettii 12D 8017277 YP_002979592.1 CDS Rpic12D_4700 NC_012855.1 33715 33849 D hypothetical protein 33715..33849 Ralstonia pickettii 12D 8017278 YP_002979593.1 CDS Rpic12D_4701 NC_012855.1 34151 35566 R PFAM: Chloride channel core; KEGG: rso:RS01992 putative voltage-gated ClC-type chloride channel ClcB; Chloride channel core complement(34151..35566) Ralstonia pickettii 12D 8017279 YP_002979594.1 CDS Rpic12D_4702 NC_012855.1 35709 37964 D KEGG: bbr:BB3138 hypothetical protein; hypothetical protein 35709..37964 Ralstonia pickettii 12D 8017280 YP_002979595.1 CDS Rpic12D_4703 NC_012855.1 38066 39493 D PFAM: Aldehyde Dehydrogenase; KEGG: bbr:BB0040 putative aldehyde dehydrogenase; Aldehyde Dehydrogenase 38066..39493 Ralstonia pickettii 12D 8017281 YP_002979596.1 CDS Rpic12D_4704 NC_012855.1 39751 41367 D PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: atc:AGR_pTi_129 dehydrogenase; glucose-methanol-choline oxidoreductase 39751..41367 Ralstonia pickettii 12D 8017282 YP_002979597.1 CDS Rpic12D_4705 NC_012855.1 41658 42962 D PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: rme:Rmet_0776 major facilitator superfamily MFS_1; major facilitator superfamily MFS_1 41658..42962 Ralstonia pickettii 12D 8017283 YP_002979598.1 CDS Rpic12D_4706 NC_012855.1 43085 43378 R hypothetical protein complement(43085..43378) Ralstonia pickettii 12D 8017284 YP_002979599.1 CDS Rpic12D_4707 NC_012855.1 43510 44421 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pna:Pnap_3436 transcriptional regulator, LysR family; LysR family transcriptional regulator 43510..44421 Ralstonia pickettii 12D 8017285 YP_002979600.1 CDS Rpic12D_4708 NC_012855.1 44439 45569 R KEGG: cbc:CbuK_1445 hypothetical protein; hypothetical protein complement(44439..45569) Ralstonia pickettii 12D 8017286 YP_002979601.1 CDS Rpic12D_4710 NC_012855.1 46367 47812 R PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: hau:Haur_1319 amine oxidase; amine oxidase complement(46367..47812) Ralstonia pickettii 12D 8017388 YP_002979602.1 CDS flgK NC_012855.1 48021 49946 R with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK complement(48021..49946) Ralstonia pickettii 12D 8017288 YP_002979603.1 CDS Rpic12D_4712 NC_012855.1 49989 50774 R TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: rso:RSp0347 flagellar basal-body rod protein FlgG; flagellar basal-body rod protein FlgG complement(49989..50774) Ralstonia pickettii 12D 8017289 YP_002979604.1 CDS flgE NC_012855.1 50821 52026 R the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE complement(50821..52026) Ralstonia pickettii 12D 8017290 YP_002979605.1 CDS Rpic12D_4714 NC_012855.1 52384 53205 R PFAM: flagellin domain protein; KEGG: rso:RSp0382 flagellin protein; flagellin domain protein complement(52384..53205) Ralstonia pickettii 12D 8017291 YP_002979606.1 CDS Rpic12D_4715 NC_012855.1 54193 55593 D PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: hau:Haur_1319 amine oxidase; amine oxidase 54193..55593 Ralstonia pickettii 12D 8017292 YP_002979607.1 CDS Rpic12D_4716 NC_012855.1 56084 57097 R KEGG: bac:BamMC406_6773 hemolysin-type calcium binding domain-containing protein; hypothetical protein complement(56084..57097) Ralstonia pickettii 12D 8017293 YP_002979608.1 CDS Rpic12D_4717 NC_012855.1 58495 58998 R PFAM: protein of unknown function DUF159; KEGG: bvi:Bcep1808_1205 hypothetical protein; hypothetical protein complement(58495..58998) Ralstonia pickettii 12D 8017294 YP_002979609.1 CDS Rpic12D_4718 NC_012855.1 58995 59339 R KEGG: bpt:Bpet1136 hypothetical protein; hypothetical protein complement(58995..59339) Ralstonia pickettii 12D 8017295 YP_002979610.1 CDS Rpic12D_4719 NC_012855.1 60536 61306 D KEGG: abc:ACICU_00694 hypothetical protein; hypothetical protein 60536..61306 Ralstonia pickettii 12D 8017296 YP_002979611.1 CDS Rpic12D_4720 NC_012855.1 61465 63477 D PFAM: Integrase catalytic region; KEGG: abc:ACICU_00693 transposase; Integrase catalytic region 61465..63477 Ralstonia pickettii 12D 8017297 YP_002979612.1 CDS Rpic12D_4721 NC_012855.1 63487 64470 D SMART: AAA ATPase; KEGG: mms:mma_0806 hypothetical protein; AAA ATPase 63487..64470 Ralstonia pickettii 12D 8017298 YP_002979613.1 CDS Rpic12D_4722 NC_012855.1 64472 66556 D KEGG: abc:ACICU_00691 hypothetical protein; hypothetical protein 64472..66556 Ralstonia pickettii 12D 8017299 YP_002979614.1 CDS Rpic12D_4723 NC_012855.1 67156 67617 R KEGG: shw:Sputw3181_3990 hypothetical protein; hypothetical protein complement(67156..67617) Ralstonia pickettii 12D 8017300 YP_002979615.1 CDS Rpic12D_4724 NC_012855.1 67607 68809 R PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: mms:mma_3463 hypothetical protein; hypothetical protein complement(67607..68809) Ralstonia pickettii 12D 8017301 YP_002979616.1 CDS Rpic12D_4725 NC_012855.1 68784 69041 R hypothetical protein complement(68784..69041) Ralstonia pickettii 12D 8017302 YP_002979617.1 CDS Rpic12D_4726 NC_012855.1 69170 70006 D KEGG: eba:ebA5936 hypothetical protein; hypothetical protein 69170..70006 Ralstonia pickettii 12D 8017303 YP_002979618.1 CDS Rpic12D_4727 NC_012855.1 70003 70686 D hypothetical protein 70003..70686 Ralstonia pickettii 12D 8017304 YP_002979619.1 CDS Rpic12D_4728 NC_012855.1 70752 71378 D KEGG: rpd:RPD_2231 hypothetical protein; hypothetical protein 70752..71378 Ralstonia pickettii 12D 8017305 YP_002979620.1 CDS Rpic12D_4729 NC_012855.1 71710 72123 R KEGG: pol:Bpro_2508 hypothetical protein; hypothetical protein complement(71710..72123) Ralstonia pickettii 12D 8017306 YP_002979621.1 CDS Rpic12D_4731 NC_012855.1 73707 75035 D KEGG: bph:Bphy_3305 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Ribonucleotide reductase alpha subunit-like protein 73707..75035 Ralstonia pickettii 12D 8017389 YP_002979622.1 CDS Rpic12D_4732 NC_012855.1 75254 76363 D KEGG: dvl:Dvul_2612 hypothetical protein; hypothetical protein 75254..76363 Ralstonia pickettii 12D 8017308 YP_002979623.1 CDS Rpic12D_4733 NC_012855.1 76420 78510 D PFAM: von Willebrand factor type A; KEGG: pol:Bpro_5495 von Willebrand factor, type A; von Willebrand factor type A 76420..78510 Ralstonia pickettii 12D 8017309 YP_002979624.1 CDS Rpic12D_4734 NC_012855.1 78573 79640 D PFAM: P4 alpha zinc-binding domain protein; SMART: P4 alpha zinc-binding domain protein; KEGG: dar:Daro_2291 hypothetical protein; P4 alpha zinc-binding domain protein 78573..79640 Ralstonia pickettii 12D 8017310 YP_002979625.1 CDS Rpic12D_4735 NC_012855.1 79783 80487 D KEGG: pmr:PMI2437 plasmid-related protein; hypothetical protein 79783..80487 Ralstonia pickettii 12D 8017311 YP_002979626.1 CDS Rpic12D_4737 NC_012855.1 81596 81790 D hypothetical protein 81596..81790 Ralstonia pickettii 12D 8017390 YP_002979627.1 CDS Rpic12D_4738 NC_012855.1 81793 82350 D PFAM: flagellar transcriptional activator FlhC; KEGG: ent:Ent638_2469 transcriptional activator FlhC; flagellar transcriptional activator FlhC 81793..82350 Ralstonia pickettii 12D 8017313 YP_002979628.1 CDS Rpic12D_4739 NC_012855.1 82427 83299 D hypothetical protein 82427..83299 Ralstonia pickettii 12D 8017314 YP_002979629.1 CDS Rpic12D_4740 NC_012855.1 83470 85635 D PFAM: Relaxase; KEGG: pol:Bpro_5472 hypothetical protein; Relaxase 83470..85635 Ralstonia pickettii 12D 8017315 YP_002979630.1 CDS Rpic12D_4741 NC_012855.1 85632 87521 D KEGG: pol:Bpro_5224 hypothetical protein; hypothetical protein 85632..87521 Ralstonia pickettii 12D 8017316 YP_002979631.1 CDS Rpic12D_4742 NC_012855.1 87564 88190 D KEGG: bac:BamMC406_6800 hypothetical protein; hypothetical protein 87564..88190 Ralstonia pickettii 12D 8017317 YP_002979632.1 CDS Rpic12D_4743 NC_012855.1 88187 88825 D KEGG: pol:Bpro_5469 hypothetical protein; hypothetical protein 88187..88825 Ralstonia pickettii 12D 8017318 YP_002979633.1 CDS Rpic12D_4744 NC_012855.1 88937 89986 D PFAM: type II secretion system protein E; KEGG: pol:Bpro_5226 type II secretion system protein E; type II secretion system protein E 88937..89986 Ralstonia pickettii 12D 8017319 YP_002979634.1 CDS Rpic12D_4745 NC_012855.1 89928 90287 D PFAM: Conjugal transfer protein TrbC; KEGG: cak:Caul_5223 conjugal transfer protein TrbC; Conjugal transfer protein TrbC 89928..90287 Ralstonia pickettii 12D 8017320 YP_002979635.1 CDS Rpic12D_4746 NC_012855.1 90303 90623 D PFAM: type IV secretory pathway VirB3 family protein; KEGG: rfr:Rfer_4261 hypothetical protein; type IV secretory pathway VirB3 family protein 90303..90623 Ralstonia pickettii 12D 8017321 YP_002979636.1 CDS Rpic12D_4747 NC_012855.1 90617 93151 D KEGG: rfr:Rfer_4260 type IV secretory pathway VirB4 components-like; type IV secretory pathway VirB4 components-like protein 90617..93151 Ralstonia pickettii 12D 8017322 YP_002979637.1 CDS Rpic12D_4748 NC_012855.1 93144 93905 D KEGG: pol:Bpro_5230 hypothetical protein; hypothetical protein 93144..93905 Ralstonia pickettii 12D 8017323 YP_002979638.1 CDS Rpic12D_4749 NC_012855.1 93936 94709 D KEGG: pol:Bpro_5464 hypothetical protein; hypothetical protein 93936..94709 Ralstonia pickettii 12D 8017324 YP_002979639.1 CDS Rpic12D_4750 NC_012855.1 94827 96149 D KEGG: pol:Bpro_5231 TrbL/VirB6 plasmid conjugal transfer protein; hypothetical protein 94827..96149 Ralstonia pickettii 12D 8017462 YP_002979640.1 CDS Rpic12D_4751 NC_012855.1 96202 96492 D hypothetical protein 96202..96492 Ralstonia pickettii 12D 8017463 YP_002979641.1 CDS Rpic12D_4752 NC_012855.1 96566 96724 D hypothetical protein 96566..96724 Ralstonia pickettii 12D 8017464 YP_002979642.1 CDS Rpic12D_4753 NC_012855.1 96721 98661 D PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: pol:Bpro_5232 AAA ATPase, central region; AAA ATPase central domain protein 96721..98661 Ralstonia pickettii 12D 8017465 YP_002979643.1 CDS Rpic12D_4754 NC_012855.1 98861 99559 D KEGG: pol:Bpro_5235 type IV secretory pathway component VirB8-like; hypothetical protein 98861..99559 Ralstonia pickettii 12D 8017466 YP_002979644.1 CDS Rpic12D_4755 NC_012855.1 99559 100326 D PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: pol:Bpro_5236 conjugal transfer protein TrbG/VirB9/CagX; Conjugal transfer protein TrbG/VirB9/CagX 99559..100326 Ralstonia pickettii 12D 8017467 YP_002979645.1 CDS Rpic12D_4756 NC_012855.1 100323 101657 D PFAM: conjugation TrbI family protein; KEGG: pol:Bpro_5237 conjugation TrbI-like protein; conjugation TrbI family protein 100323..101657 Ralstonia pickettii 12D 8017468 YP_002979646.1 CDS Rpic12D_4757 NC_012855.1 101663 103183 D KEGG: pol:Bpro_5238 hypothetical protein; hypothetical protein 101663..103183 Ralstonia pickettii 12D 8017469 YP_002979647.1 CDS Rpic12D_4758 NC_012855.1 103180 103623 D KEGG: rme:Rmet_6295 hypothetical protein; hypothetical protein 103180..103623 Ralstonia pickettii 12D 8017470 YP_002979648.1 CDS Rpic12D_4759 NC_012855.1 103927 105717 D KEGG: bpy:Bphyt_7243 hypothetical protein; hypothetical protein 103927..105717 Ralstonia pickettii 12D 8017471 YP_002979649.1 CDS Rpic12D_4760 NC_012855.1 105714 107015 D KEGG: rme:Rmet_6293 hypothetical protein; hypothetical protein 105714..107015 Ralstonia pickettii 12D 8017472 YP_002979650.1 CDS Rpic12D_4761 NC_012855.1 107020 107595 D KEGG: rme:Rmet_6292 hypothetical protein; hypothetical protein 107020..107595 Ralstonia pickettii 12D 8017473 YP_002979651.1 CDS Rpic12D_4762 NC_012855.1 107596 109521 D PFAM: type II secretion system protein E; KEGG: rme:Rmet_6291 type II secretion system protein E; type II secretion system protein E 107596..109521 Ralstonia pickettii 12D 8017474 YP_002979652.1 CDS Rpic12D_4763 NC_012855.1 109518 110672 D KEGG: bpy:Bphyt_7247 type II secretory pathway component PulF-like protein; type II secretory pathway component PulF-like protein 109518..110672 Ralstonia pickettii 12D 8017475 YP_002979653.1 CDS Rpic12D_4764 NC_012855.1 110882 111484 D KEGG: rme:Rmet_6289 hypothetical protein; hypothetical protein 110882..111484 Ralstonia pickettii 12D 8017476 YP_002979654.1 CDS Rpic12D_4765 NC_012855.1 111640 113055 D KEGG: bpy:Bphyt_7249 hypothetical protein; hypothetical protein 111640..113055 Ralstonia pickettii 12D 8017477 YP_002979655.1 CDS Rpic12D_4766 NC_012855.1 113224 113709 R PFAM: Lytic transglycosylase catalytic; KEGG: rso:RSc2896 hypothetical protein; Lytic transglycosylase catalytic complement(113224..113709) Ralstonia pickettii 12D 8017478 YP_002979656.1 CDS Rpic12D_4767 NC_012855.1 113702 114055 R hypothetical protein complement(113702..114055) Ralstonia pickettii 12D 8017479 YP_002979657.1 CDS Rpic12D_4768 NC_012855.1 114121 114570 R KEGG: ajs:Ajs_0364 methyl-accepting chemotaxis sensory transducer; hypothetical protein complement(114121..114570) Ralstonia pickettii 12D 8017480 YP_002979658.1 CDS Rpic12D_4769 NC_012855.1 114580 115632 R KEGG: pol:Bpro_4960 hypothetical protein; hypothetical protein complement(114580..115632) Ralstonia pickettii 12D 8017481 YP_002979659.1 CDS Rpic12D_4770 NC_012855.1 117216 118682 D KEGG: dar:Daro_2218 hypothetical protein; hypothetical protein 117216..118682 Ralstonia pickettii 12D 8017482 YP_002979660.1 CDS Rpic12D_4771 NC_012855.1 118672 118794 D hypothetical protein 118672..118794 Ralstonia pickettii 12D 8017483 YP_002979661.1 CDS Rpic12D_4772 NC_012855.1 118791 120293 D KEGG: dps:DP1991 hypothetical protein; hypothetical protein 118791..120293 Ralstonia pickettii 12D 8017484 YP_002979662.1 CDS Rpic12D_4773 NC_012855.1 120641 121177 D hypothetical protein 120641..121177 Ralstonia pickettii 12D 8017485 YP_002979663.1 CDS Rpic12D_4774 NC_012855.1 121281 122276 D KEGG: rfr:Rfer_4473 hypothetical protein; hypothetical protein 121281..122276 Ralstonia pickettii 12D 8017486 YP_002979664.1 CDS Rpic12D_4775 NC_012855.1 122315 122821 D hypothetical protein 122315..122821 Ralstonia pickettii 12D 8017487 YP_002979665.1 CDS Rpic12D_4776 NC_012855.1 122956 123228 D hypothetical protein 122956..123228 Ralstonia pickettii 12D 8017488 YP_002979666.1 CDS Rpic12D_4777 NC_012855.1 123307 124851 D KEGG: amr:AM1_C0038 hypothetical protein; hypothetical protein 123307..124851 Ralstonia pickettii 12D 8017489 YP_002979667.1 CDS Rpic12D_4778 NC_012855.1 124848 125234 D hypothetical protein 124848..125234 Ralstonia pickettii 12D 8017490 YP_002979668.1 CDS Rpic12D_4779 NC_012855.1 125444 125698 R KEGG: vei:Veis_5042 hypothetical protein; hypothetical protein complement(125444..125698) Ralstonia pickettii 12D 8017491 YP_002979669.1 CDS Rpic12D_4780 NC_012855.1 125695 126201 R KEGG: mfa:Mfla_0465 hypothetical protein; hypothetical protein complement(125695..126201) Ralstonia pickettii 12D 8017492 YP_002979670.1 CDS Rpic12D_4781 NC_012855.1 126987 127379 D hypothetical protein 126987..127379 Ralstonia pickettii 12D 8017493 YP_002979671.1 CDS Rpic12D_4782 NC_012855.1 127422 127607 D hypothetical protein 127422..127607 Ralstonia pickettii 12D 8017494 YP_002979672.1 CDS Rpic12D_4783 NC_012855.1 127660 128070 D hypothetical protein 127660..128070 Ralstonia pickettii 12D 8017495 YP_002979673.1 CDS Rpic12D_4784 NC_012855.1 128179 128499 D hypothetical protein 128179..128499 Ralstonia pickettii 12D 8017496 YP_002979674.1 CDS Rpic12D_4785 NC_012855.1 128506 128820 D hypothetical protein 128506..128820 Ralstonia pickettii 12D 8017497 YP_002979675.1 CDS Rpic12D_4786 NC_012855.1 128831 128989 D hypothetical protein 128831..128989 Ralstonia pickettii 12D 8017498 YP_002979676.1 CDS Rpic12D_4787 NC_012855.1 129014 129253 D hypothetical protein 129014..129253 Ralstonia pickettii 12D 8017499 YP_002979677.1 CDS Rpic12D_4788 NC_012855.1 129265 129726 D hypothetical protein 129265..129726 Ralstonia pickettii 12D 8017500 YP_002979678.1 CDS Rpic12D_4789 NC_012855.1 129754 130248 D hypothetical protein 129754..130248 Ralstonia pickettii 12D 8017501 YP_002979679.1 CDS Rpic12D_4790 NC_012855.1 130354 130584 D hypothetical protein 130354..130584 Ralstonia pickettii 12D 8017502 YP_002979680.1 CDS Rpic12D_4791 NC_012855.1 130686 130892 D hypothetical protein 130686..130892 Ralstonia pickettii 12D 8017503 YP_002979681.1 CDS Rpic12D_4792 NC_012855.1 130992 131342 D KEGG: bvi:Bcep1808_7442 hypothetical protein; hypothetical protein 130992..131342 Ralstonia pickettii 12D 8017504 YP_002979682.1 CDS Rpic12D_4793 NC_012855.1 131780 132160 D hypothetical protein 131780..132160 Ralstonia pickettii 12D 8017505 YP_002979683.1 CDS Rpic12D_4794 NC_012855.1 132217 132474 D hypothetical protein 132217..132474 Ralstonia pickettii 12D 8017506 YP_002979684.1 CDS Rpic12D_4795 NC_012855.1 132687 132917 D hypothetical protein 132687..132917 Ralstonia pickettii 12D 8017507 YP_002979685.1 CDS Rpic12D_4796 NC_012855.1 133227 133505 D hypothetical protein 133227..133505 Ralstonia pickettii 12D 8017508 YP_002979686.1 CDS Rpic12D_4797 NC_012855.1 133517 133942 D hypothetical protein 133517..133942 Ralstonia pickettii 12D 8017509 YP_002979687.1 CDS Rpic12D_4798 NC_012855.1 133954 134946 D PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: ajs:Ajs_4217 exonuclease, RNase T and DNA polymerase III; Exonuclease RNase T and DNA polymerase III 133954..134946 Ralstonia pickettii 12D 8017510 YP_002979688.1 CDS Rpic12D_4799 NC_012855.1 135128 135520 R hypothetical protein complement(135128..135520) Ralstonia pickettii 12D 8017511 YP_002979689.1 CDS Rpic12D_4800 NC_012855.1 135609 136970 R TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; KEGG: bpt:Bpet2255 hypothetical protein; HipA N-terminal domain protein complement(135609..136970) Ralstonia pickettii 12D 8017512 YP_002979690.1 CDS Rpic12D_4801 NC_012855.1 136970 137353 R SMART: helix-turn-helix domain protein; KEGG: bpt:Bpet2254 transcriptional regulator; helix-turn-helix domain protein complement(136970..137353) Ralstonia pickettii 12D 8017513 YP_002979691.1 CDS Rpic12D_4802 NC_012855.1 137638 138375 R hypothetical protein complement(137638..138375) Ralstonia pickettii 12D 8017514 YP_002979692.1 CDS Rpic12D_4803 NC_012855.1 138798 139307 R hypothetical protein complement(138798..139307) Ralstonia pickettii 12D 8017515 YP_002979693.1 CDS Rpic12D_4804 NC_012855.1 139310 139933 R PFAM: conserved hypothetical protein; KEGG: mpt:Mpe_B0288 hypothetical protein; hypothetical protein complement(139310..139933) Ralstonia pickettii 12D 8017516 YP_002979694.1 CDS Rpic12D_4805 NC_012855.1 139948 140190 R KEGG: vei:Veis_5042 hypothetical protein; hypothetical protein complement(139948..140190) Ralstonia pickettii 12D 8017517 YP_002979695.1 CDS Rpic12D_4806 NC_012855.1 140190 140579 R hypothetical protein complement(140190..140579) Ralstonia pickettii 12D 8017518 YP_002979696.1 CDS Rpic12D_4807 NC_012855.1 140627 140848 R hypothetical protein complement(140627..140848) Ralstonia pickettii 12D 8017519 YP_002979697.1 CDS Rpic12D_4808 NC_012855.1 140858 141160 R hypothetical protein complement(140858..141160) Ralstonia pickettii 12D 8017520 YP_002979698.1 CDS Rpic12D_4809 NC_012855.1 141171 141500 R hypothetical protein complement(141171..141500) Ralstonia pickettii 12D 8017521 YP_002979699.1 CDS Rpic12D_4810 NC_012855.1 141517 141789 R hypothetical protein complement(141517..141789) Ralstonia pickettii 12D 8017522 YP_002979700.1 CDS Rpic12D_4811 NC_012855.1 142145 142489 D hypothetical protein 142145..142489 Ralstonia pickettii 12D 8017523 YP_002979701.1 CDS Rpic12D_4812 NC_012855.1 142658 142933 D hypothetical protein 142658..142933 Ralstonia pickettii 12D 8017524 YP_002979702.1 CDS Rpic12D_4813 NC_012855.1 143199 143903 D KEGG: rme:Rmet_6025 hypothetical protein; hypothetical protein 143199..143903 Ralstonia pickettii 12D 8017525 YP_002979703.1 CDS Rpic12D_4814 NC_012855.1 145262 145636 D hypothetical protein 145262..145636 Ralstonia pickettii 12D 8017526 YP_002979704.1 CDS Rpic12D_4815 NC_012855.1 145696 146097 D hypothetical protein 145696..146097 Ralstonia pickettii 12D 8017527 YP_002979705.1 CDS Rpic12D_4816 NC_012855.1 146066 146401 D hypothetical protein 146066..146401 Ralstonia pickettii 12D 8017528 YP_002979706.1 CDS Rpic12D_4817 NC_012855.1 146465 146734 D hypothetical protein 146465..146734 Ralstonia pickettii 12D 8017529 YP_002979707.1 CDS Rpic12D_4818 NC_012855.1 146750 146962 D KEGG: asa:ASA_P4G153 hypothetical protein; hypothetical protein 146750..146962 Ralstonia pickettii 12D 8017530 YP_002979708.1 CDS Rpic12D_4819 NC_012855.1 146984 147427 D KEGG: bvi:Bcep1808_7513 hypothetical protein; hypothetical protein 146984..147427 Ralstonia pickettii 12D 8017531 YP_002979709.1 CDS Rpic12D_4820 NC_012855.1 147439 147681 D hypothetical protein 147439..147681 Ralstonia pickettii 12D 8017532 YP_002979710.1 CDS Rpic12D_4821 NC_012855.1 147720 148076 D KEGG: bac:BamMC406_6738 hypothetical protein; hypothetical protein 147720..148076 Ralstonia pickettii 12D 8017533 YP_002979711.1 CDS Rpic12D_4822 NC_012855.1 148197 148391 D hypothetical protein 148197..148391 Ralstonia pickettii 12D 8017534 YP_002979712.1 CDS Rpic12D_4823 NC_012855.1 148409 148762 D hypothetical protein 148409..148762 Ralstonia pickettii 12D 8017535 YP_002979713.1 CDS Rpic12D_4824 NC_012855.1 148755 149015 D hypothetical protein 148755..149015 Ralstonia pickettii 12D 8017536 YP_002979714.1 CDS Rpic12D_4825 NC_012855.1 149031 149213 D hypothetical protein 149031..149213 Ralstonia pickettii 12D 8017537 YP_002979715.1 CDS Rpic12D_4826 NC_012855.1 149274 149615 D hypothetical protein 149274..149615 Ralstonia pickettii 12D 8017538 YP_002979716.1 CDS Rpic12D_4827 NC_012855.1 149986 152700 R hypothetical protein complement(149986..152700) Ralstonia pickettii 12D 8017539 YP_002979717.1 CDS Rpic12D_4828 NC_012855.1 153395 154927 D hypothetical protein 153395..154927 Ralstonia pickettii 12D 8017542 YP_002979718.1 CDS Rpic12D_4829 NC_012855.1 155012 155245 D hypothetical protein 155012..155245 Ralstonia pickettii 12D 8017545 YP_002979719.1 CDS Rpic12D_4830 NC_012855.1 155293 155877 D KEGG: mgi:Mflv_5483 hypothetical protein; hypothetical protein 155293..155877 Ralstonia pickettii 12D 8017546 YP_002979720.1 CDS Rpic12D_4831 NC_012855.1 156263 156520 D hypothetical protein 156263..156520 Ralstonia pickettii 12D 8017547 YP_002979721.1 CDS Rpic12D_4832 NC_012855.1 156603 156908 D hypothetical protein 156603..156908 Ralstonia pickettii 12D 8017548 YP_002979722.1 CDS Rpic12D_4833 NC_012855.1 157188 157574 D hypothetical protein 157188..157574 Ralstonia pickettii 12D 8017549 YP_002979723.1 CDS Rpic12D_4834 NC_012855.1 157610 158035 D KEGG: rme:Rmet_6046 hypothetical protein; hypothetical protein 157610..158035 Ralstonia pickettii 12D 8017550 YP_002979724.1 CDS Rpic12D_4836 NC_012855.1 158814 159101 D hypothetical protein 158814..159101 Ralstonia pickettii 12D 8017391 YP_002979725.1 CDS Rpic12D_4837 NC_012855.1 159144 159479 D hypothetical protein 159144..159479 Ralstonia pickettii 12D 8017552 YP_002979726.1 CDS Rpic12D_4838 NC_012855.1 159520 159777 D hypothetical protein 159520..159777 Ralstonia pickettii 12D 8017553 YP_002979727.1 CDS Rpic12D_4839 NC_012855.1 160158 160361 D KEGG: maq:Maqu_4222 hypothetical protein; hypothetical protein 160158..160361 Ralstonia pickettii 12D 8017554 YP_002979728.1 CDS Rpic12D_4840 NC_012855.1 160381 160776 D KEGG: pol:Bpro_5378 hypothetical protein; hypothetical protein 160381..160776 Ralstonia pickettii 12D 8017555 YP_002979729.1 CDS Rpic12D_4841 NC_012855.1 160786 161001 D hypothetical protein 160786..161001 Ralstonia pickettii 12D 8017556 YP_002979730.1 CDS Rpic12D_4842 NC_012855.1 161081 161377 D KEGG: bvi:Bcep1808_6855 hypothetical protein; hypothetical protein 161081..161377 Ralstonia pickettii 12D 8017557 YP_002979731.1 CDS Rpic12D_4843 NC_012855.1 161880 162035 D KEGG: bac:BamMC406_6705 hypothetical protein; hypothetical protein 161880..162035 Ralstonia pickettii 12D 8017558 YP_002979732.1 CDS Rpic12D_4844 NC_012855.1 162070 162399 D KEGG: eta:ETA_pET350160 hypothetical protein; hypothetical protein 162070..162399 Ralstonia pickettii 12D 8017559 YP_002979733.1 CDS Rpic12D_4845 NC_012855.1 162569 162790 D hypothetical protein 162569..162790 Ralstonia pickettii 12D 8017560 YP_002979734.1 CDS Rpic12D_4846 NC_012855.1 162874 163176 D hypothetical protein 162874..163176 Ralstonia pickettii 12D 8017561 YP_002979735.1 CDS Rpic12D_4847 NC_012855.1 163377 163655 D KEGG: bpy:Bphyt_6520 hypothetical protein; hypothetical protein 163377..163655 Ralstonia pickettii 12D 8017562 YP_002979736.1 CDS Rpic12D_4848 NC_012855.1 163663 163974 D hypothetical protein 163663..163974 Ralstonia pickettii 12D 8017563 YP_002979737.1 CDS Rpic12D_4849 NC_012855.1 163971 164414 D KEGG: sty:HCM1.197c hypothetical protein; hypothetical protein 163971..164414 Ralstonia pickettii 12D 8017564 YP_002979738.1 CDS Rpic12D_4850 NC_012855.1 164589 164924 D hypothetical protein 164589..164924 Ralstonia pickettii 12D 8017565 YP_002979739.1 CDS Rpic12D_4851 NC_012855.1 165369 165767 D hypothetical protein 165369..165767 Ralstonia pickettii 12D 8017566 YP_002979740.1 CDS Rpic12D_4852 NC_012855.1 166080 166946 D KEGG: hypothetical protein LOC100021983; hypothetical protein 166080..166946 Ralstonia pickettii 12D 8017567 YP_002979741.1 CDS Rpic12D_4853 NC_012855.1 167303 167908 D KEGG: GG12928 gene product from transcript GG12928-RA; hypothetical protein 167303..167908 Ralstonia pickettii 12D 8017568 YP_002979742.1 CDS Rpic12D_4854 NC_012855.1 167917 168714 D KEGG: rle:pRL120089 hypothetical protein; hypothetical protein 167917..168714 Ralstonia pickettii 12D 8017569 YP_002979743.1 CDS Rpic12D_4855 NC_012855.1 168759 169514 D KEGG: alpha/beta hydrolase fold-1 domain-containing protein; hypothetical protein 168759..169514 Ralstonia pickettii 12D 8017570 YP_002979744.1 CDS Rpic12D_4856 NC_012855.1 169728 169934 D hypothetical protein 169728..169934 Ralstonia pickettii 12D 8017571 YP_002979745.1 CDS Rpic12D_4857 NC_012855.1 169931 170647 D KEGG: bvi:Bcep1808_7333 hypothetical protein; hypothetical protein 169931..170647 Ralstonia pickettii 12D 8017572 YP_002979746.1 CDS Rpic12D_4858 NC_012855.1 170730 171203 D KEGG: asa:ASA_P4G035 hypothetical protein; hypothetical protein 170730..171203 Ralstonia pickettii 12D 8017573 YP_002979747.1 CDS Rpic12D_4859 NC_012855.1 171224 171532 D hypothetical protein 171224..171532 Ralstonia pickettii 12D 8017574 YP_002979748.1 CDS Rpic12D_4860 NC_012855.1 171761 172048 D hypothetical protein 171761..172048 Ralstonia pickettii 12D 8017575 YP_002979749.1 CDS Rpic12D_4861 NC_012855.1 172266 172640 D KEGG: bvi:Bcep1808_7312 hypothetical protein; hypothetical protein 172266..172640 Ralstonia pickettii 12D 8017576 YP_002979750.1 CDS Rpic12D_4862 NC_012855.1 172672 172881 D hypothetical protein 172672..172881 Ralstonia pickettii 12D 8017577 YP_002979751.1 CDS Rpic12D_4863 NC_012855.1 173033 173689 D hypothetical protein 173033..173689 Ralstonia pickettii 12D 8017578 YP_002979752.1 CDS Rpic12D_4864 NC_012855.1 173752 173970 D hypothetical protein 173752..173970 Ralstonia pickettii 12D 8017579 YP_002979753.1 CDS Rpic12D_4865 NC_012855.1 174024 174212 D hypothetical protein 174024..174212 Ralstonia pickettii 12D 8017580 YP_002979754.1 CDS Rpic12D_4866 NC_012855.1 174215 174580 D hypothetical protein 174215..174580 Ralstonia pickettii 12D 8017581 YP_002979755.1 CDS Rpic12D_4867 NC_012855.1 174621 174821 D hypothetical protein 174621..174821 Ralstonia pickettii 12D 8017582 YP_002979756.1 CDS Rpic12D_4868 NC_012855.1 174825 175283 D hypothetical protein 174825..175283 Ralstonia pickettii 12D 8017583 YP_002979757.1 CDS Rpic12D_4869 NC_012855.1 175359 175961 D KEGG: rfr:Rfer_4442 hypothetical protein; hypothetical protein 175359..175961 Ralstonia pickettii 12D 8017584 YP_002979758.1 CDS Rpic12D_4870 NC_012855.1 175981 176898 R KEGG: cti:RALTA_B2256 hypothetical protein; hypothetical protein complement(175981..176898) Ralstonia pickettii 12D 8017585 YP_002979759.1 CDS Rpic12D_4871 NC_012855.1 176902 177957 R KEGG: psp:PSPPH_0985 hypothetical protein; hypothetical protein complement(176902..177957) Ralstonia pickettii 12D 8017586 YP_002979760.1 CDS Rpic12D_4872 NC_012855.1 179519 180508 D hypothetical protein 179519..180508 Ralstonia pickettii 12D 8017587 YP_002979761.1 CDS Rpic12D_4873 NC_012855.1 180502 181833 D hypothetical protein 180502..181833 Ralstonia pickettii 12D 8017588 YP_002979762.1 CDS Rpic12D_4874 NC_012855.1 181827 183317 D KEGG: bvi:Bcep1808_6902 hypothetical protein; hypothetical protein 181827..183317 Ralstonia pickettii 12D 8017589 YP_002979763.1 CDS Rpic12D_4875 NC_012855.1 183345 184823 D KEGG: spe:Spro_4935 hypothetical protein; hypothetical protein 183345..184823 Ralstonia pickettii 12D 8017590 YP_002979764.1 CDS Rpic12D_4876 NC_012855.1 185048 187072 D KEGG: xcv:XCVd0061 hypothetical protein; hypothetical protein 185048..187072 Ralstonia pickettii 12D 8017591 YP_002979765.1 CDS Rpic12D_4877 NC_012855.1 187324 188769 D KEGG: mpt:Mpe_B0098 hypothetical protein; hypothetical protein 187324..188769 Ralstonia pickettii 12D 8017592 YP_002979766.1 CDS Rpic12D_4878 NC_012855.1 188785 189291 D hypothetical protein 188785..189291 Ralstonia pickettii 12D 8017593 YP_002979767.1 CDS Rpic12D_4879 NC_012855.1 189380 189535 D hypothetical protein 189380..189535 Ralstonia pickettii 12D 8017594 YP_002979768.1 CDS Rpic12D_4880 NC_012855.1 189900 190106 D hypothetical protein 189900..190106 Ralstonia pickettii 12D 8017595 YP_002979769.1 CDS Rpic12D_4881 NC_012855.1 190186 190434 D hypothetical protein 190186..190434 Ralstonia pickettii 12D 8017596 YP_002979770.1 CDS Rpic12D_4882 NC_012855.1 190794 191252 D hypothetical protein 190794..191252 Ralstonia pickettii 12D 8017597 YP_002979771.1 CDS Rpic12D_4883 NC_012855.1 191293 191484 D hypothetical protein 191293..191484 Ralstonia pickettii 12D 8017598 YP_002979772.1 CDS Rpic12D_4884 NC_012855.1 191590 191727 D hypothetical protein 191590..191727 Ralstonia pickettii 12D 8017599 YP_002979773.1 CDS Rpic12D_4885 NC_012855.1 192431 192838 D hypothetical protein 192431..192838 Ralstonia pickettii 12D 8017600 YP_002979774.1 CDS Rpic12D_4886 NC_012855.1 192977 194332 D KEGG:.; hypothetical protein 192977..194332 Ralstonia pickettii 12D 8017601 YP_002979775.1 CDS Rpic12D_4887 NC_012855.1 194657 194938 D hypothetical protein 194657..194938 Ralstonia pickettii 12D 8017602 YP_002979776.1 CDS Rpic12D_4888 NC_012855.1 195062 196177 D hypothetical protein 195062..196177 Ralstonia pickettii 12D 8017603 YP_002979777.1 CDS Rpic12D_4889 NC_012855.1 196494 196733 D hypothetical protein 196494..196733 Ralstonia pickettii 12D 8017604 YP_002979778.1 CDS Rpic12D_4890 NC_012855.1 196914 197963 D KEGG: bvi:Bcep1808_7008 hypothetical protein; hypothetical protein 196914..197963 Ralstonia pickettii 12D 8017605 YP_002979779.1 CDS Rpic12D_4891 NC_012855.1 198303 199136 D KEGG: rme:Rmet_6164 hypothetical protein; hypothetical protein 198303..199136 Ralstonia pickettii 12D 8017606 YP_002979780.1 CDS Rpic12D_4892 NC_012855.1 199457 199783 D KEGG: bpy:Bphyt_7284 hypothetical protein; hypothetical protein 199457..199783 Ralstonia pickettii 12D 8017607 YP_002979781.1 CDS Rpic12D_4893 NC_012855.1 199797 200150 D KEGG: bvi:Bcep1808_7401 hypothetical protein; hypothetical protein 199797..200150 Ralstonia pickettii 12D 8017608 YP_002979782.1 CDS Rpic12D_4894 NC_012855.1 200320 200682 D hypothetical protein 200320..200682 Ralstonia pickettii 12D 8017609 YP_002979783.1 CDS Rpic12D_4895 NC_012855.1 200797 201228 D KEGG: pol:Bpro_5371 hypothetical protein; hypothetical protein 200797..201228 Ralstonia pickettii 12D 8017610 YP_002979784.1 CDS Rpic12D_4896 NC_012855.1 201526 202452 D hypothetical protein 201526..202452 Ralstonia pickettii 12D 8017611 YP_002979785.1 CDS Rpic12D_4897 NC_012855.1 202624 204195 D KEGG: bvi:Bcep1808_7344 hypothetical protein; hypothetical protein 202624..204195 Ralstonia pickettii 12D 8017612 YP_002979786.1 CDS Rpic12D_4898 NC_012855.1 204571 204801 D KEGG: bpy:Bphyt_7330 hypothetical protein; hypothetical protein 204571..204801 Ralstonia pickettii 12D 8017613 YP_002979787.1 CDS Rpic12D_4899 NC_012855.1 205001 205342 D hypothetical protein 205001..205342 Ralstonia pickettii 12D 8017614 YP_002979788.1 CDS Rpic12D_4900 NC_012855.1 205353 205703 D hypothetical protein 205353..205703 Ralstonia pickettii 12D 8017615 YP_002979789.1 CDS Rpic12D_4901 NC_012855.1 205737 206699 D PFAM: protein of unknown function DUF159; KEGG: bpy:Bphyt_0216 putative uncharacterized conserved protein; hypothetical protein 205737..206699 Ralstonia pickettii 12D 8017616 YP_002979790.1 CDS Rpic12D_4902 NC_012855.1 206893 207513 D hypothetical protein 206893..207513 Ralstonia pickettii 12D 8017617 YP_002979791.1 CDS Rpic12D_4903 NC_012855.1 207525 208601 D KEGG: rpc:RPC_3657 periplasmic protein-like; periplasmic protein-like protein 207525..208601 Ralstonia pickettii 12D 8017618 YP_002979792.1 CDS Rpic12D_4904 NC_012855.1 208622 209152 D KEGG: kpe:KPK_4141 putative phage head morphogenesis protein; hypothetical protein 208622..209152 Ralstonia pickettii 12D 8017619 YP_002979793.1 CDS Rpic12D_4905 NC_012855.1 209337 209939 D hypothetical protein 209337..209939 Ralstonia pickettii 12D 8017620 YP_002979794.1 CDS Rpic12D_4906 NC_012855.1 209967 210539 D KEGG: syx:SynWH7803_1906 predicted membrane-associated Zn-dependent protease; hypothetical protein 209967..210539 Ralstonia pickettii 12D 8017621 YP_002979795.1 CDS Rpic12D_4907 NC_012855.1 211006 211203 D hypothetical protein 211006..211203 Ralstonia pickettii 12D 8017622 YP_002979796.1 CDS Rpic12D_4908 NC_012855.1 211647 211865 D hypothetical protein 211647..211865 Ralstonia pickettii 12D 8017623 YP_002979797.1 CDS Rpic12D_4909 NC_012855.1 211914 212129 D hypothetical protein 211914..212129 Ralstonia pickettii 12D 8017541 YP_002979798.1 CDS Rpic12D_4910 NC_012855.1 212413 213027 R hypothetical protein complement(212413..213027) Ralstonia pickettii 12D 8017543 YP_002979799.1 CDS Rpic12D_4911 NC_012855.1 213177 213641 D hypothetical protein 213177..213641 Ralstonia pickettii 12D 8017192 YP_002979800.1 CDS Rpic12D_4912 NC_012855.1 213931 214122 D hypothetical protein 213931..214122 Ralstonia pickettii 12D 8017193 YP_002979801.1 CDS Rpic12D_4913 NC_012855.1 214297 214764 D hypothetical protein 214297..214764 Ralstonia pickettii 12D 8017194 YP_002979802.1 CDS Rpic12D_4914 NC_012855.1 214816 215061 D KEGG: bch:Bcen2424_6887 hypothetical protein; hypothetical protein 214816..215061 Ralstonia pickettii 12D 8017195 YP_002979803.1 CDS Rpic12D_4915 NC_012855.1 215100 215381 D hypothetical protein 215100..215381 Ralstonia pickettii 12D 8017196 YP_002979804.1 CDS Rpic12D_4916 NC_012855.1 215482 215691 D hypothetical protein 215482..215691 Ralstonia pickettii 12D 8017197 YP_002979805.1 CDS Rpic12D_4917 NC_012855.1 215786 216379 D KEGG: sbn:Sbal195_3747 nodulation protein L; Acetyltransferase (isoleucine patch superfamily)-like protein 215786..216379 Ralstonia pickettii 12D 8017198 YP_002979806.1 CDS Rpic12D_4918 NC_012855.1 216452 217183 D KEGG: amr:AM1_0115 hypothetical protein; hypothetical protein 216452..217183 Ralstonia pickettii 12D 8017199 YP_002979807.1 CDS Rpic12D_4919 NC_012855.1 217843 218424 D KEGG: bvi:Bcep1808_7648 hypothetical protein; hypothetical protein 217843..218424 Ralstonia pickettii 12D 8017200 YP_002979808.1 CDS Rpic12D_4920 NC_012855.1 218609 218998 D KEGG: mes:Meso_3813 hypothetical protein; hypothetical protein 218609..218998 Ralstonia pickettii 12D 8017201 YP_002979809.1 CDS Rpic12D_4921 NC_012855.1 219022 219564 D KEGG: swi:Swit_4944 hypothetical protein; hypothetical protein 219022..219564 Ralstonia pickettii 12D 8017202 YP_002979810.1 CDS Rpic12D_4922 NC_012855.1 219634 220827 D KEGG: rme:Rmet_6043 hypothetical protein; hypothetical protein 219634..220827 Ralstonia pickettii 12D 8017203 YP_002979811.1 CDS Rpic12D_4923 NC_012855.1 220839 221255 D hypothetical protein 220839..221255 Ralstonia pickettii 12D 8017204 YP_002979812.1 CDS Rpic12D_4924 NC_012855.1 221263 222270 D KEGG: dsh:Dshi_1909 hypothetical protein; hypothetical protein 221263..222270 Ralstonia pickettii 12D 8017205 YP_002979813.1 CDS Rpic12D_4925 NC_012855.1 222292 223389 D KEGG: bvi:Bcep1808_7249 hypothetical protein; hypothetical protein 222292..223389 Ralstonia pickettii 12D 8017206 YP_002979814.1 CDS Rpic12D_4926 NC_012855.1 223953 224486 D KEGG: eba:p1B216 hypothetical protein; putative transcriptional regulator, AsnC family 223953..224486 Ralstonia pickettii 12D 8017207 YP_002979815.1 CDS Rpic12D_4927 NC_012855.1 224499 224786 D hypothetical protein 224499..224786 Ralstonia pickettii 12D 8017208 YP_002979816.1 CDS Rpic12D_4928 NC_012855.1 224798 225265 D KEGG: amr:AM1_A0326 hypothetical protein; hypothetical protein 224798..225265 Ralstonia pickettii 12D 8017209 YP_002979817.1 CDS Rpic12D_4929 NC_012855.1 225285 225620 D hypothetical protein 225285..225620 Ralstonia pickettii 12D 8017210 YP_002979818.1 CDS Rpic12D_4930 NC_012855.1 225630 226112 D hypothetical protein 225630..226112 Ralstonia pickettii 12D 8017211 YP_002979819.1 CDS Rpic12D_4931 NC_012855.1 226194 226844 D hypothetical protein 226194..226844 Ralstonia pickettii 12D 8017212 YP_002979820.1 CDS Rpic12D_4932 NC_012855.1 227867 229240 D Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 227867..229240 Ralstonia pickettii 12D 8017213 YP_002979821.1 CDS Rpic12D_4933 NC_012855.1 229472 230341 D hypothetical protein 229472..230341 Ralstonia pickettii 12D 8017214 YP_002979822.1 CDS Rpic12D_4934 NC_012855.1 230431 230742 D PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS; KEGG: rso:RS02604 putative HNS-like transcription regulator protein; histone family protein nucleoid-structuring protein H-NS 230431..230742 Ralstonia pickettii 12D 8017215 YP_002979823.1 CDS Rpic12D_4935 NC_012855.1 230928 231176 D hypothetical protein 230928..231176 Ralstonia pickettii 12D 8017216 YP_002979824.1 CDS Rpic12D_4936 NC_012855.1 231243 231470 D hypothetical protein 231243..231470 Ralstonia pickettii 12D 8017217 YP_002979825.1 CDS Rpic12D_4937 NC_012855.1 231634 232008 D KEGG: bpm:BURPS1710b_A1045 hypothetical protein; hypothetical protein 231634..232008 Ralstonia pickettii 12D 8017218 YP_002979826.1 CDS Rpic12D_4938 NC_012855.1 232541 233317 D hypothetical protein 232541..233317 Ralstonia pickettii 12D 8017219 YP_002979827.1 CDS Rpic12D_4939 NC_012855.1 233434 234069 D hypothetical protein 233434..234069 Ralstonia pickettii 12D 8017220 YP_002979828.1 CDS Rpic12D_4940 NC_012855.1 234287 234658 D hypothetical protein 234287..234658 Ralstonia pickettii 12D 8017221 YP_002979829.1 CDS Rpic12D_4941 NC_012855.1 234676 235188 D hypothetical protein 234676..235188 Ralstonia pickettii 12D 8017222 YP_002979830.1 CDS Rpic12D_4942 NC_012855.1 235407 235781 D PFAM: protein of unknown function DUF1294; KEGG: maq:Maqu_2966 hypothetical protein; hypothetical protein 235407..235781 Ralstonia pickettii 12D 8017223 YP_002979831.1 CDS Rpic12D_4943 NC_012855.1 235935 236129 D hypothetical protein 235935..236129 Ralstonia pickettii 12D 8017224 YP_002979832.1 CDS Rpic12D_4944 NC_012855.1 236182 236877 D hypothetical protein 236182..236877 Ralstonia pickettii 12D 8017225 YP_002979833.1 CDS Rpic12D_4945 NC_012855.1 236998 237174 D hypothetical protein 236998..237174 Ralstonia pickettii 12D 8017226 YP_002979834.1 CDS Rpic12D_4946 NC_012855.1 237468 237683 D hypothetical protein 237468..237683 Ralstonia pickettii 12D 8017227 YP_002979835.1 CDS Rpic12D_4947 NC_012855.1 237930 238364 D hypothetical protein 237930..238364 Ralstonia pickettii 12D 8017228 YP_002979836.1 CDS Rpic12D_4948 NC_012855.1 238425 239693 D KEGG: amr:AM1_F0154 hypothetical protein; hypothetical protein 238425..239693 Ralstonia pickettii 12D 8017229 YP_002979837.1 CDS Rpic12D_4949 NC_012855.1 239744 240094 D hypothetical protein 239744..240094 Ralstonia pickettii 12D 8017230 YP_002979838.1 CDS Rpic12D_4950 NC_012855.1 240160 240720 D hypothetical protein 240160..240720 Ralstonia pickettii 12D 8017231 YP_002979839.1 CDS Rpic12D_4951 NC_012855.1 240868 241236 D hypothetical protein 240868..241236 Ralstonia pickettii 12D 8017232 YP_002979840.1 CDS Rpic12D_4952 NC_012855.1 241392 241619 D hypothetical protein 241392..241619 Ralstonia pickettii 12D 8017233 YP_002979841.1 CDS Rpic12D_4953 NC_012855.1 241789 242562 D KEGG: mpt:Mpe_B0331 hypothetical protein; hypothetical protein 241789..242562 Ralstonia pickettii 12D 8017234 YP_002979842.1 CDS Rpic12D_4954 NC_012855.1 242642 244063 D KEGG: bpy:Bphyt_7324 integrase family protein; integrase family protein 242642..244063 Ralstonia pickettii 12D 8017235 YP_002979843.1 CDS Rpic12D_4955 NC_012855.1 244111 245928 D KEGG: reh:PHG054 hypothetical protein; hypothetical protein 244111..245928 Ralstonia pickettii 12D 8017236 YP_002979844.1 CDS Rpic12D_4956 NC_012855.1 246145 248004 D KEGG: bph:Bphy_7605 hypothetical protein; hypothetical protein 246145..248004 Ralstonia pickettii 12D 8017237 YP_002979845.1 CDS Rpic12D_4957 NC_012855.1 248001 248378 D KEGG: reh:PHG052 hypothetical protein; hypothetical protein 248001..248378 Ralstonia pickettii 12D 8017238 YP_002979846.1 CDS Rpic12D_4958 NC_012855.1 249112 250443 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: bmj:BMULJ_03712 phthalate dioxygenase oxygenase; Rieske (2Fe-2S) domain protein 249112..250443 Ralstonia pickettii 12D 8017239 YP_002979847.1 CDS Rpic12D_4959 NC_012855.1 250447 251634 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bmj:BMULJ_03711 cis-phthalate dihydrodiol dehydrogenase; oxidoreductase domain protein 250447..251634 Ralstonia pickettii 12D 8017240 YP_002979848.1 CDS Rpic12D_4960 NC_012855.1 251725 252570 R KEGG: bmu:Bmul_4808 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase complement(251725..252570) Ralstonia pickettii 12D 8017241 YP_002979849.1 CDS Rpic12D_4961 NC_012855.1 252694 253272 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bmj:BMULJ_03708 MarR family transcriptional regulator; transcriptional regulator, MarR family complement(252694..253272) Ralstonia pickettii 12D 8017242 YP_002979850.1 CDS Rpic12D_4962 NC_012855.1 253368 254432 R PFAM: porin Gram-negative type; KEGG: bmj:BMULJ_03732 outer membrane porin; porin Gram-negative type complement(253368..254432) Ralstonia pickettii 12D 8017243 YP_002979851.1 CDS Rpic12D_4963 NC_012855.1 254538 255530 R KEGG: bmj:BMULJ_03707 4,5-dihydroxyphthalate decarboxylase; 4,5-dihydroxyphthalate decarboxylase complement(254538..255530) Ralstonia pickettii 12D 8017244 YP_002979852.1 CDS Rpic12D_4964 NC_012855.1 255576 256922 R TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_4267 D-galactonate transporter; d-galactonate transporter complement(255576..256922) Ralstonia pickettii 12D 8017245 YP_002979853.1 CDS Rpic12D_4965 NC_012855.1 257188 258150 D PFAM: ferredoxin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: bmj:BMULJ_03705 FAD/NAD(P)-binding oxidoreductase; ferredoxin 257188..258150 Ralstonia pickettii 12D 8017540 YP_002979854.1 CDS Rpic12D_4966 NC_012855.1 258194 258691 D TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: bxe:Bxe_A3521 hypothetical protein; hemerythrin-like metal-binding protein 258194..258691 Ralstonia pickettii 12D 8017393 YP_002979855.1 CDS Rpic12D_4967 NC_012855.1 259099 259611 R KEGG: bac:BamMC406_6697 hypothetical protein; hypothetical protein complement(259099..259611) Ralstonia pickettii 12D 8017394 YP_002979856.1 CDS Rpic12D_4968 NC_012855.1 259622 260128 R KEGG: bsu:BSU20890 hypothetical protein; hypothetical protein complement(259622..260128) Ralstonia pickettii 12D 8017395 YP_002979857.1 CDS Rpic12D_4969 NC_012855.1 260149 260298 R hypothetical protein complement(260149..260298) Ralstonia pickettii 12D 8017396 YP_002979858.1 CDS Rpic12D_4970 NC_012855.1 260586 262619 D KEGG: bch:Bcen2424_0206 ATP-dependent OLD family endonuclease; ATP-dependent OLD family endonuclease 260586..262619 Ralstonia pickettii 12D 8017397 YP_002979859.1 CDS Rpic12D_4971 NC_012855.1 262601 264358 D KEGG: gbe:GbCGDNIH1_1179 DNA helicase II; DNA helicase II 262601..264358 Ralstonia pickettii 12D 8017398 YP_002979860.1 CDS Rpic12D_4972 NC_012855.1 264604 264831 D KEGG: mpt:Mpe_B0331 hypothetical protein; hypothetical protein 264604..264831 Ralstonia pickettii 12D 8017399 YP_002979861.1 CDS Rpic12D_4973 NC_012855.1 264957 265472 D KEGG: mpt:Mpe_B0341 hypothetical protein; hypothetical protein 264957..265472 Ralstonia pickettii 12D 8017400 YP_002979862.1 CDS Rpic12D_4974 NC_012855.1 265651 265929 D hypothetical protein 265651..265929 Ralstonia pickettii 12D 8017401 YP_002979863.1 CDS Rpic12D_4975 NC_012855.1 265926 266210 D hypothetical protein 265926..266210 Ralstonia pickettii 12D 8017402 YP_002979864.1 CDS Rpic12D_4976 NC_012855.1 266332 266682 D KEGG: mpt:Mpe_B0225 hypothetical protein; hypothetical protein 266332..266682 Ralstonia pickettii 12D 8017403 YP_002979865.1 CDS Rpic12D_4977 NC_012855.1 266786 266971 D KEGG: ajs:Ajs_4203 hypothetical protein; hypothetical protein 266786..266971 Ralstonia pickettii 12D 8017404 YP_002979866.1 CDS Rpic12D_4978 NC_012855.1 267252 267470 D KEGG: bvi:Bcep1808_6947 hypothetical protein; hypothetical protein 267252..267470 Ralstonia pickettii 12D 8017405 YP_002979867.1 CDS Rpic12D_4979 NC_012855.1 267647 268102 D KEGG: xcv:XCVd0146 hypothetical protein; hypothetical protein 267647..268102 Ralstonia pickettii 12D 8017406 YP_002979868.1 CDS Rpic12D_4980 NC_012855.1 268248 270062 D KEGG: bac:BamMC406_6782 hypothetical protein; hypothetical protein 268248..270062 Ralstonia pickettii 12D 8017407 YP_002979869.1 CDS Rpic12D_4981 NC_012855.1 270376 272004 D KEGG: dar:Daro_2290 ATP-binding region, ATPase-like; hypothetical protein 270376..272004 Ralstonia pickettii 12D 8017408 YP_002979870.1 CDS Rpic12D_4982 NC_012855.1 272214 272972 D KEGG: ajs:Ajs_4213 phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases like enzyme; Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase-like protein 272214..272972 Ralstonia pickettii 12D 8017409 YP_002979871.1 CDS Rpic12D_4983 NC_012855.1 273116 273805 D hypothetical protein 273116..273805 Ralstonia pickettii 12D 8017410 YP_002979872.1 CDS Rpic12D_4984 NC_012855.1 274062 275300 D PFAM: DNA methylase N-4/N-6 domain protein; KEGG: cti:pRALTA_0172 putative DNA methyltransferase, modification methylase; DNA methylase N-4/N-6 domain protein 274062..275300 Ralstonia pickettii 12D 8017411 YP_002979873.1 CDS Rpic12D_4985 NC_012855.1 275310 277409 D KEGG: bpy:Bphyt_5894 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; MHYT domain protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase with MHYT sensor 275310..277409 Ralstonia pickettii 12D 8017412 YP_002979874.1 CDS Rpic12D_4986 NC_012855.1 277542 278111 D hypothetical protein 277542..278111 Ralstonia pickettii 12D 8017413 YP_002979875.1 CDS Rpic12D_4987 NC_012855.1 278193 279695 D KEGG: reh:PHG321 putative helicase superfamily I; putative helicase superfamily I 278193..279695 Ralstonia pickettii 12D 8017414 YP_002979876.1 CDS Rpic12D_4988 NC_012855.1 279762 280646 D PFAM: Gp37Gp68 family protein; KEGG: oca:OCAR_5537 phage Gp37Gp68; Gp37Gp68 family protein 279762..280646 Ralstonia pickettii 12D 8017415 YP_002979877.1 CDS Rpic12D_4989 NC_012855.1 280697 281131 D hypothetical protein 280697..281131 Ralstonia pickettii 12D 8017416 YP_002979878.1 CDS Rpic12D_4990 NC_012855.1 281244 282398 D KEGG: bpy:Bphyt_7275 hypothetical protein; hypothetical protein 281244..282398 Ralstonia pickettii 12D 8017417 YP_002979879.1 CDS Rpic12D_4991 NC_012855.1 282573 283121 D PFAM: protein of unknown function DUF1643; KEGG: npu:Npun_R6263 hypothetical protein; hypothetical protein 282573..283121 Ralstonia pickettii 12D 8017418 YP_002979880.1 CDS Rpic12D_4992 NC_012855.1 283131 283556 D hypothetical protein 283131..283556 Ralstonia pickettii 12D 8017419 YP_002979881.1 CDS Rpic12D_4993 NC_012855.1 283592 284083 D KEGG: swd:Swoo_1011 methyl-accepting chemotaxis sensory transducer; hypothetical protein 283592..284083 Ralstonia pickettii 12D 8017420 YP_002979882.1 CDS Rpic12D_4994 NC_012855.1 284188 285048 D KEGG: bvi:Bcep1808_6883 hypothetical protein; hypothetical protein 284188..285048 Ralstonia pickettii 12D 8017421 YP_002979883.1 CDS Rpic12D_4995 NC_012855.1 285651 286595 D KEGG: eba:p1B250 hypothetical protein; hypothetical protein 285651..286595 Ralstonia pickettii 12D 8017422 YP_002979884.1 CDS Rpic12D_4996 NC_012855.1 286804 287280 D KEGG: rme:Rmet_6080 hypothetical protein; hypothetical protein 286804..287280 Ralstonia pickettii 12D 8017423 YP_002979885.1 CDS Rpic12D_4997 NC_012855.1 287446 287628 D hypothetical protein 287446..287628 Ralstonia pickettii 12D 8017424 YP_002979886.1 CDS Rpic12D_4998 NC_012855.1 288078 288323 D hypothetical protein 288078..288323 Ralstonia pickettii 12D 8017425 YP_002979887.1 CDS Rpic12D_4999 NC_012855.1 288424 288930 D KEGG: pmy:Pmen_1440 17 kDa surface antigen; hypothetical protein 288424..288930 Ralstonia pickettii 12D 8017426 YP_002979888.1 CDS Rpic12D_5000 NC_012855.1 289058 289177 D hypothetical protein 289058..289177 Ralstonia pickettii 12D 8017427 YP_002979889.1 CDS Rpic12D_5001 NC_012855.1 289174 289395 D KEGG: rfr:Rfer_4424 hypothetical protein; hypothetical protein 289174..289395 Ralstonia pickettii 12D 8017428 YP_002979890.1 CDS Rpic12D_5002 NC_012855.1 289781 290062 D hypothetical protein 289781..290062 Ralstonia pickettii 12D 8017429 YP_002979891.1 CDS Rpic12D_5003 NC_012855.1 290055 290573 D PFAM: conserved hypothetical protein; KEGG: bac:BamMC406_6789 hypothetical protein; hypothetical protein 290055..290573 Ralstonia pickettii 12D 8017430 YP_002979892.1 CDS Rpic12D_5004 NC_012855.1 290678 291718 D PFAM: phosphoadenosine phosphosulfate reductase; KEGG: mpt:Mpe_B0336 hypothetical protein; phosphoadenosine phosphosulfate reductase 290678..291718 Ralstonia pickettii 12D 8017431 YP_002979893.1 CDS Rpic12D_5005 NC_012855.1 291832 292506 D KEGG: maq:Maqu_4315 hypothetical protein; hypothetical protein 291832..292506 Ralstonia pickettii 12D 8017432 YP_002979894.1 CDS Rpic12D_5006 NC_012855.1 292651 293031 D hypothetical protein 292651..293031 Ralstonia pickettii 12D 8017433 YP_002979895.1 CDS Rpic12D_5007 NC_012855.1 293431 293958 D hypothetical protein 293431..293958 Ralstonia pickettii 12D 8017434 YP_002979896.1 CDS Rpic12D_5008 NC_012855.1 294036 294173 D hypothetical protein 294036..294173 Ralstonia pickettii 12D 8017435 YP_002979897.1 CDS Rpic12D_5009 NC_012855.1 294431 295825 R hypothetical protein complement(294431..295825) Ralstonia pickettii 12D 8017436 YP_002979898.1 CDS Rpic12D_5010 NC_012855.1 296029 296244 R hypothetical protein complement(296029..296244) Ralstonia pickettii 12D 8017437 YP_002979899.1 CDS Rpic12D_5011 NC_012855.1 296631 296894 R KEGG: reh:PHG313 hypothetical protein; hypothetical protein complement(296631..296894) Ralstonia pickettii 12D 8017438 YP_002979900.1 CDS Rpic12D_5012 NC_012855.1 296869 300036 R PFAM: helicase domain protein; SMART: helicase domain protein; KEGG: reh:PHG314 putative helicase superfamily II; helicase domain protein complement(296869..300036) Ralstonia pickettii 12D 8017439 YP_002979901.1 CDS Rpic12D_5013 NC_012855.1 300033 300854 R KEGG: cti:pRALTA_0159 hypothetical protein; hypothetical protein complement(300033..300854) Ralstonia pickettii 12D 8017440 YP_002979902.1 CDS Rpic12D_5014 NC_012855.1 300966 301787 R KEGG: cti:pRALTA_0159 hypothetical protein; hypothetical protein complement(300966..301787) Ralstonia pickettii 12D 8017441 YP_002979903.1 CDS Rpic12D_5015 NC_012855.1 302015 302785 D hypothetical protein 302015..302785 Ralstonia pickettii 12D 8017442 YP_002979904.1 CDS Rpic12D_5016 NC_012855.1 302858 303037 D hypothetical protein 302858..303037 Ralstonia pickettii 12D 8017443 YP_002979905.1 CDS Rpic12D_5017 NC_012855.1 303039 303872 D hypothetical protein 303039..303872 Ralstonia pickettii 12D 8017444 YP_002979906.1 CDS Rpic12D_5018 NC_012855.1 303926 304252 D hypothetical protein 303926..304252 Ralstonia pickettii 12D 8017445 YP_002979907.1 CDS Rpic12D_5019 NC_012855.1 304274 305014 D PFAM: peptidase A24A prepilin type IV; KEGG: pau:PA14_58770 type 4 prepilin peptidase PilD; peptidase A24A prepilin type IV 304274..305014 Ralstonia pickettii 12D 8017446 YP_002979908.1 CDS Rpic12D_5020 NC_012855.1 305191 306966 D KEGG: reh:PHG312 putative partitioning protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; parB-like partition protein 305191..306966 Ralstonia pickettii 12D 8017447 YP_002979909.1 CDS Rpic12D_5021 NC_012855.1 307084 307587 D KEGG: ajs:Ajs_1592 hypothetical protein; hypothetical protein 307084..307587 Ralstonia pickettii 12D 8017448 YP_002979910.1 CDS Rpic12D_5022 NC_012855.1 307600 307812 D KEGG: reh:PHG310 hypothetical protein; hypothetical protein 307600..307812 Ralstonia pickettii 12D 8017449 YP_002979911.1 CDS Rpic12D_5023 NC_012855.1 307944 309083 D hypothetical protein 307944..309083 Ralstonia pickettii 12D 8017450 YP_002979912.1 CDS Rpic12D_5024 NC_012855.1 309073 309816 D KEGG: eba:p1B75 hypothetical protein; hypothetical protein 309073..309816 Ralstonia pickettii 12D 8017451 YP_002979913.1 CDS Rpic12D_5025 NC_012855.1 309816 310454 D KEGG: eba:p1B74 hypothetical protein; hypothetical protein 309816..310454 Ralstonia pickettii 12D 8017452 YP_002979914.1 CDS Rpic12D_5026 NC_012855.1 310444 311214 D PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: bac:BamMC406_6523 UBA/ThiF-type NAD/FAD binding protein; UBA/THIF-type NAD/FAD binding protein 310444..311214 Ralstonia pickettii 12D 8017453 YP_002979915.1 CDS Rpic12D_5027 NC_012855.1 311402 311629 D hypothetical protein 311402..311629 Ralstonia pickettii 12D 8017454 YP_002979916.1 CDS Rpic12D_5028 NC_012855.1 311815 312963 D KEGG: dac:Daci_1708 hypothetical protein; hypothetical protein 311815..312963 Ralstonia pickettii 12D 8017455 YP_002979917.1 CDS Rpic12D_5029 NC_012855.1 313033 313731 R KEGG: vei:Veis_4124 hypothetical protein; hypothetical protein complement(313033..313731) Ralstonia pickettii 12D 8017456 YP_002979918.1 CDS Rpic12D_5030 NC_012855.1 314029 315354 R PFAM: protein of unknown function DUF1173; KEGG: pol:Bpro_5361 hypothetical protein; hypothetical protein complement(314029..315354) Ralstonia pickettii 12D 8017457 YP_002979919.1 CDS Rpic12D_5031 NC_012855.1 315434 315949 R hypothetical protein complement(315434..315949) Ralstonia pickettii 12D 8017458 YP_002979920.1 CDS Rpic12D_5032 NC_012855.1 317311 317889 D KEGG: rme:Rmet_6003 hypothetical protein; hypothetical protein 317311..317889 Ralstonia pickettii 12D 8017459 YP_002979921.1 CDS Rpic12D_5033 NC_012855.1 318115 318378 D hypothetical protein 318115..318378 Ralstonia pickettii 12D 8017460 YP_002979922.1 CDS Rpic12D_5034 NC_012855.1 318378 318794 D hypothetical protein 318378..318794 Ralstonia pickettii 12D 8017461 YP_002979923.1 CDS Rpic12D_5035 NC_012855.1 318791 319081 D KEGG: pol:Bpro_5355 hypothetical protein; hypothetical protein 318791..319081 Ralstonia pickettii 12D 8017544 YP_002979924.1 CDS Rpic12D_5036 NC_012855.1 319160 319258 D hypothetical protein 319160..319258 Ralstonia pickettii 12D 8017325 YP_002979925.1 CDS Rpic12D_5037 NC_012855.1 319319 320077 D KEGG: asa:ASA_P4G124 NgrC; hypothetical protein 319319..320077 Ralstonia pickettii 12D 8017326 YP_002979926.1 CDS Rpic12D_5038 NC_012855.1 320398 321039 D hypothetical protein 320398..321039 Ralstonia pickettii 12D 8017327 YP_002979927.1 CDS Rpic12D_5039 NC_012855.1 321062 321346 R PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: sse:Ssed_0600 histone family protein DNA-binding protein; histone family protein DNA-binding protein complement(321062..321346) Ralstonia pickettii 12D 8017328 YP_002979928.1 CDS Rpic12D_5040 NC_012855.1 321743 322282 D KEGG: pfl:PFL_4660 hypothetical protein; hypothetical protein 321743..322282 Ralstonia pickettii 12D 8017329 YP_002979929.1 CDS Rpic12D_5041 NC_012855.1 322740 323726 D KEGG: bvi:Bcep1808_5494 phage integrase family protein; hypothetical protein 322740..323726 Ralstonia pickettii 12D 8017330 YP_002979930.1 CDS Rpic12D_5042 NC_012855.1 323962 324666 R KEGG: xau:Xaut_3691 XRE family transcriptional regulator; hypothetical protein complement(323962..324666) Ralstonia pickettii 12D 8017331 YP_002979931.1 CDS Rpic12D_5043 NC_012855.1 324861 325898 R KEGG: reh:PHG105 putative KfrA protein; putative KfrA protein complement(324861..325898) Ralstonia pickettii 12D 8017332 YP_002979932.1 CDS Rpic12D_5044 NC_012855.1 326112 326843 D KEGG: gvi:gll4023 unknown protein; hypothetical protein 326112..326843 Ralstonia pickettii 12D 8017333 YP_002979933.1 CDS Rpic12D_5045 NC_012855.1 326895 327158 D PFAM: CopG domain protein DNA-binding domain protein; KEGG: smd:Smed_6450 transcriptional regulator, CopG family; transcriptional regulator, CopG family 326895..327158 Ralstonia pickettii 12D 8017334 YP_002979934.1 CDS Rpic12D_5046 NC_012855.1 327158 327433 D PFAM: plasmid stabilization system; KEGG: sfl:CP0218 hypothetical protein; plasmid stabilization system 327158..327433 Ralstonia pickettii 12D 8017335 YP_002979935.1 CDS Rpic12D_5047 NC_012855.1 327448 328089 D KEGG: kpn:KPN_pKPN3p05907 hypothetical protein; hypothetical protein 327448..328089 Ralstonia pickettii 12D 8017336 YP_002979936.1 CDS Rpic12D_5048 NC_012855.1 328124 329317 D PFAM: integrase family protein; KEGG: bmu:Bmul_5789 integrase family protein; integrase family protein 328124..329317 Ralstonia pickettii 12D 8017337 YP_002979937.1 CDS Rpic12D_5049 NC_012855.1 329483 329818 R KEGG: bvi:Bcep1808_7205 TnpC; TnpC complement(329483..329818) Ralstonia pickettii 12D 8017338 YP_002979938.1 CDS Rpic12D_5050 NC_012855.1 329811 332810 R PFAM: transposase Tn3 family protein; KEGG: bvi:Bcep1808_7171 transposase Tn3 family protein; transposase Tn3 family protein complement(329811..332810) Ralstonia pickettii 12D 8017339 YP_002979939.1 CDS Rpic12D_5051 NC_012855.1 333319 334209 D KEGG: pna:Pnap_4981 mucin-associated surface protein; mucin-associated surface protein 333319..334209 Ralstonia pickettii 12D 8017340 YP_002979940.1 CDS Rpic12D_5052 NC_012855.1 334235 335707 R PFAM: protein of unknown function DUF746; KEGG: rso:RSc0889 hypothetical protein; hypothetical protein complement(334235..335707) Ralstonia pickettii 12D 8017341 YP_002979941.1 CDS Rpic12D_5053 NC_012855.1 335749 336117 R hypothetical protein complement(335749..336117) Ralstonia pickettii 12D 8017342 YP_002979942.1 CDS Rpic12D_5054 NC_012855.1 336320 337156 R PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: rso:RS04811 signal peptide protein; PpiC-type peptidyl-prolyl cis-trans isomerase complement(336320..337156) Ralstonia pickettii 12D 8017343 YP_002979943.1 CDS Rpic12D_5055 NC_012855.1 337168 338895 R PFAM: Polypeptide-transport-associated domain protein ShlB-type; Hemolysin activator HlyB domain protein; KEGG: rso:RSc3182 activation/secretion signal peptide protein; Polypeptide-transport-associated domain protein ShlB-type complement(337168..338895) Ralstonia pickettii 12D 8017344 YP_002979944.1 CDS Rpic12D_5056 NC_012855.1 338907 341450 R TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: filamentous haemagglutinin domain protein; Haemagluttinin repeat-containing protein; KEGG: rso:RS04813 hemagglutinin-like signal peptide protein; filamentous hemagglutinin family outer membrane protein complement(338907..341450) Ralstonia pickettii 12D 8017345 YP_002979945.1 CDS Rpic12D_5057 NC_012855.1 341833 342276 R hypothetical protein complement(341833..342276) Ralstonia pickettii 12D 8017346 YP_002979946.1 CDS Rpic12D_5058 NC_012855.1 342273 350633 R TIGRFAM: filamentous haemagglutinin family outer membrane protein; adhesin HecA family; PFAM: filamentous haemagglutinin domain protein; Haemagluttinin repeat-containing protein; protein of unknown function DUF637 hemagglutinin putative; KEGG: rso:RSc3188 putative hemagglutinin-related protein; filamentous hemagglutinin family outer membrane protein complement(342273..350633) Ralstonia pickettii 12D 8017347 YP_002979947.1 CDS Rpic12D_5059 NC_012855.1 351452 353977 D PFAM: ATP-binding region ATPase domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; response regulator receiver; KEGG: bpy:Bphyt_4754 integral membrane sensor hybrid histidine kinase; Hpt sensor hybrid histidine kinase 351452..353977 Ralstonia pickettii 12D 8017348 YP_002979948.1 CDS Rpic12D_5060 NC_012855.1 354076 354279 D hypothetical protein 354076..354279 Ralstonia pickettii 12D 8017349 YP_002979949.1 CDS Rpic12D_5061 NC_012855.1 354339 354680 D hypothetical protein 354339..354680 Ralstonia pickettii 12D 8017350 YP_002979950.1 CDS Rpic12D_5062 NC_012855.1 354737 355393 D KEGG: xfa:XF1918 hypothetical protein; putative transcriptional activator, TenA family 354737..355393 Ralstonia pickettii 12D 8017351 YP_002979951.1 CDS Rpic12D_5063 NC_012855.1 355466 355846 R hypothetical protein complement(355466..355846) Ralstonia pickettii 12D 8017352 YP_002979952.1 CDS Rpic12D_5064 NC_012855.1 355843 356130 R KEGG: cti:pRALTA_0666 hypothetical protein; hypothetical protein complement(355843..356130) Ralstonia pickettii 12D 8017353 YP_002979953.1 CDS Rpic12D_5065 NC_012855.1 356339 356551 R KEGG: reu:Reut_C6073 hypothetical protein; hypothetical protein complement(356339..356551) Ralstonia pickettii 12D 8017354 YP_002979954.1 CDS Rpic12D_5066 NC_012855.1 357028 357480 D KEGG: mxa:MXAN_7420 response regulator; response regulator receiver protein 357028..357480 Ralstonia pickettii 12D 8017355 YP_002979955.1 CDS Rpic12D_5067 NC_012855.1 358030 358869 R KEGG: asa:ASA_P4G069 hypothetical protein; hypothetical protein complement(358030..358869) Ralstonia pickettii 12D 8017356 YP_002979956.1 CDS Rpic12D_5068 NC_012855.1 359049 359456 R PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: cti:pRALTA_0149 putative histone-like DNA-binding protein; histone family protein DNA-binding protein complement(359049..359456) Ralstonia pickettii 12D 8017357 YP_002979957.1 CDS Rpic12D_5069 NC_012855.1 359993 360769 R hypothetical protein complement(359993..360769) Ralstonia pickettii 12D 8017358 YP_002979958.1 CDS Rpic12D_5070 NC_012855.1 361779 361877 D hypothetical protein 361779..361877 Ralstonia pickettii 12D 8017359 YP_002979959.1 CDS Rpic12D_5071 NC_012855.1 362032 362442 D PFAM: PAAR repeat-containing protein; KEGG: cti:RALTA_A2676 hypothetical protein; PAAR repeat-containing protein 362032..362442 Ralstonia pickettii 12D 8017360 YP_002979960.1 CDS Rpic12D_5072 NC_012855.1 362445 362948 D KEGG: cti:RALTA_A2675 hypothetical protein; hypothetical protein 362445..362948 Ralstonia pickettii 12D 8017361 YP_002979961.1 CDS Rpic12D_5073 NC_012855.1 362935 363282 D KEGG: cti:RALTA_A2674 hypothetical protein; hypothetical protein 362935..363282 Ralstonia pickettii 12D 8017362 YP_002979962.1 CDS Rpic12D_5074 NC_012855.1 363282 363869 D KEGG: cti:RALTA_A2673 hypothetical protein; hypothetical protein 363282..363869 Ralstonia pickettii 12D 8017363 YP_002979963.1 CDS Rpic12D_5075 NC_012855.1 363872 364591 D KEGG: bte:BTH_II2326 hypothetical protein; hypothetical protein 363872..364591 Ralstonia pickettii 12D 8017364 YP_002979964.1 CDS Rpic12D_5076 NC_012855.1 365755 367956 D PFAM: integrase family protein; KEGG: bvi:Bcep1808_7050 phage integrase family protein; integrase family protein 365755..367956 Ralstonia pickettii 12D 8017365 YP_002979965.1 CDS Rpic12D_5077 NC_012855.1 369700 370704 D PFAM: plasmid encoded RepA protein; KEGG: rso:RSp0001 RepA replicase protein; plasmid encoded RepA protein 369700..370704 Ralstonia pickettii 12D 8017366 YP_002979966.1 CDS Rpic12D_5078 NC_012855.1 371232 371522 D hypothetical protein 371232..371522 Ralstonia pickettii 12D 8017367 YP_002979967.1 CDS Rpic12D_5079 NC_012855.1 371727 371948 D KEGG: rme:Rmet_6245 hypothetical protein; hypothetical protein 371727..371948 Ralstonia pickettii 12D 8017368 YP_002979968.1 CDS Rpic12D_5080 NC_012855.1 372019 372273 R hypothetical protein complement(372019..372273) Ralstonia pickettii 12D 8017369 YP_002979969.1 CDS Rpic12D_5081 NC_012855.1 372433 373470 R TIGRFAM: parB-like partition protein; KEGG: bvi:Bcep1808_7053 ParB-like partition protein; parB-like partition protein complement(372433..373470) Ralstonia pickettii 12D 8017370 YP_002979970.1 CDS Rpic12D_5082 NC_012855.1 373463 374146 R PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bvi:Bcep1808_7052 cobyrinic acid a,c-diamide synthase; Cobyrinic acid ac-diamide synthase complement(373463..374146) Ralstonia pickettii 12D 8017371 YP_002979971.1 CDS Rpic12D_5083 NC_012855.1 374469 374579 D hypothetical protein 374469..374579 Ralstonia pickettii 12D 8017372 YP_002979972.1 CDS Rpic12D_5084 NC_012855.1 375572 376831 R PFAM: initiator RepB protein; KEGG: bac:BamMC406_5756 hypothetical protein; initiator RepB protein complement(375572..376831) Ralstonia pickettii 12D 8017373 YP_002979973.1 CDS Rpic12D_5085 NC_012855.1 378056 378256 D hypothetical protein 378056..378256 Ralstonia pickettii 12D 8017374 YP_002979974.1 CDS Rpic12D_5086 NC_012855.1 378397 378981 D PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: vei:Veis_3688 protein of unknown function DUF882; hypothetical protein 378397..378981 Ralstonia pickettii 12D 8017375 YP_002979975.1 CDS Rpic12D_5087 NC_012855.1 378978 379883 R KEGG: pol:Bpro_5046 hypothetical protein; hypothetical protein complement(378978..379883) Ralstonia pickettii 12D 8017376 YP_002979976.1 CDS Rpic12D_5088 NC_012855.1 379984 380409 D hypothetical protein 379984..380409 Ralstonia pickettii 12D 8017377 YP_002979977.1 CDS Rpic12D_5089 NC_012855.1 380411 381172 D hypothetical protein 380411..381172 Ralstonia pickettii 12D 8017378 YP_002979978.1 CDS Rpic12D_5090 NC_012855.1 381239 382510 D KEGG: pol:Bpro_5360 hypothetical protein; hypothetical protein 381239..382510 Ralstonia pickettii 12D 8017379 YP_002979979.1 CDS Rpic12D_5091 NC_012855.1 382529 383410 D KEGG: bxe:Bxe_A1062 ribonuclease E; hypothetical protein 382529..383410 Ralstonia pickettii 12D 8017380 YP_002979980.1 CDS Rpic12D_5092 NC_012855.1 383407 384027 D KEGG: rfr:Rfer_4315 hypothetical protein; hypothetical protein 383407..384027 Ralstonia pickettii 12D 8017381 YP_002979981.1 CDS Rpic12D_5093 NC_012855.1 384096 385343 D PFAM: TraB family protein; KEGG: pol:Bpro_5052 hypothetical protein; conjugal transfer protein TraB 384096..385343 Ralstonia pickettii 12D 8017382 YP_002979982.1 CDS Rpic12D_5094 NC_012855.1 385430 386218 R hypothetical protein complement(385430..386218) Ralstonia pickettii 12D 8017383 YP_002979983.1 CDS Rpic12D_5095 NC_012855.1 386310 386720 R hypothetical protein complement(386310..386720) Ralstonia pickettii 12D 8017384 YP_002979984.1 CDS Rpic12D_5096 NC_012855.1 386747 388588 R PFAM: UvrD/REP helicase; KEGG: pol:Bpro_5077 UvrD/REP helicase; UvrD/REP helicase complement(386747..388588) Ralstonia pickettii 12D 8017385 YP_002979985.1 CDS Rpic12D_5097 NC_012855.1 388592 389362 R KEGG: ajs:Ajs_1561 hypothetical protein; hypothetical protein complement(388592..389362) Ralstonia pickettii 12D 8017386 YP_002979986.1 CDS dnaA NC_012856.1 613 2202 D binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 613..2202 Ralstonia pickettii 12D 8021147 YP_002979987.1 CDS Rpic12D_0002 NC_012856.1 2479 3594 D binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 2479..3594 Ralstonia pickettii 12D 8017625 YP_002979988.1 CDS gyrB NC_012856.1 3723 6251 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 3723..6251 Ralstonia pickettii 12D 8017626 YP_002979989.1 CDS Rpic12D_0004 NC_012856.1 6417 7163 D KEGG: hip:CGSHiEE_08925 hypothetical protein; hypothetical protein 6417..7163 Ralstonia pickettii 12D 8017627 YP_002979990.1 CDS Rpic12D_0006 NC_012856.1 7604 9472 D KEGG: ecp:ECP_1910 hypothetical protein; hypothetical protein 7604..9472 Ralstonia pickettii 12D 8017629 YP_002979991.1 CDS Rpic12D_0007 NC_012856.1 9627 10877 R PFAM: transposase mutator type; KEGG: rso:RSp0478 ISRSO7-transposase protein; transposase mutator type complement(9627..10877) Ralstonia pickettii 12D 8017630 YP_002979992.1 CDS Rpic12D_0008 NC_012856.1 10937 12040 R hypothetical protein complement(10937..12040) Ralstonia pickettii 12D 8017631 YP_002979993.1 CDS Rpic12D_0009 NC_012856.1 12433 12801 D KEGG: rso:RSc3434 hypothetical protein; hypothetical protein 12433..12801 Ralstonia pickettii 12D 8017632 YP_002979994.1 CDS Rpic12D_0010 NC_012856.1 13272 14231 D PFAM: fimbrial protein; KEGG: pae:PA5284 hypothetical protein; fimbrial protein 13272..14231 Ralstonia pickettii 12D 8017633 YP_002979995.1 CDS Rpic12D_0011 NC_012856.1 14723 15487 D PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: rso:RSc2102 transcription regulator protein; GntR family transcriptional regulator 14723..15487 Ralstonia pickettii 12D 8017634 YP_002979996.1 CDS Rpic12D_0012 NC_012856.1 15515 16342 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: rso:RSc2103 amino-acid-binding periplasmic (PBP) ABC transporter protein; family 3 extracellular solute-binding protein 15515..16342 Ralstonia pickettii 12D 8017635 YP_002979997.1 CDS Rpic12D_0013 NC_012856.1 16501 17235 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc2104 amino-acid transmembrane ABC transporter protein; polar amino acid ABC transporter permease 16501..17235 Ralstonia pickettii 12D 8017636 YP_002979998.1 CDS Rpic12D_0014 NC_012856.1 17232 17885 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc2105 amino-acid transmembrane ABC transporter protein; polar amino acid ABC transporter permease 17232..17885 Ralstonia pickettii 12D 8017637 YP_002979999.1 CDS Rpic12D_0015 NC_012856.1 17872 18609 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RSc2106 amino-acid ATP-binding ABC transporter protein; ABC transporter 17872..18609 Ralstonia pickettii 12D 8017638 YP_002980000.1 CDS Rpic12D_0016 NC_012856.1 18693 19640 D PFAM: protein of unknown function UPF0187; KEGG: rso:RSc3414 hypothetical protein; hypothetical protein 18693..19640 Ralstonia pickettii 12D 8017639 YP_002980001.1 CDS Rpic12D_0017 NC_012856.1 19663 20334 R KEGG: reu:Reut_B4310 hypothetical protein; hypothetical protein complement(19663..20334) Ralstonia pickettii 12D 8017640 YP_002980002.1 CDS Rpic12D_0018 NC_012856.1 20437 21135 R PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; KEGG: reh:H16_B1147 cNMP regulatory protein; Crp/Fnr family transcriptional regulator complement(20437..21135) Ralstonia pickettii 12D 8017641 YP_002980003.1 CDS Rpic12D_0019 NC_012856.1 21329 22963 D activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 21329..22963 Ralstonia pickettii 12D 8017642 YP_002980004.1 CDS Rpic12D_0020 NC_012856.1 23072 24637 R TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: rso:RSc0127 hemagglutinin-related protein; 40-residue YVTN family beta-propeller repeat-containing protein complement(23072..24637) Ralstonia pickettii 12D 8017643 YP_002980005.1 CDS Rpic12D_0021 NC_012856.1 24853 25398 D PFAM: GCN5-related N-acetyltransferase; KEGG: bte:BTH_II0494 acetyltransferase; N-acetyltransferase GCN5 24853..25398 Ralstonia pickettii 12D 8017644 YP_002980006.1 CDS Rpic12D_0022 NC_012856.1 25484 25954 R TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase; KEGG: bte:BTH_I0996 carboxymuconolactone decarboxylase family protein; alkylhydroperoxidase complement(25484..25954) Ralstonia pickettii 12D 8017645 YP_002980007.1 CDS Rpic12D_0023 NC_012856.1 26093 27004 R TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: bte:BTH_I0997 ECF subfamily RNA polymerase sigma factor; ECF subfamily RNA polymerase sigma-24 subunit complement(26093..27004) Ralstonia pickettii 12D 8017646 YP_002980008.1 CDS Rpic12D_0024 NC_012856.1 27076 29280 R KEGG: bvi:Bcep1808_3441 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; response regulator receiver; PAS/PAC sensor hybrid histidine kinase complement(27076..29280) Ralstonia pickettii 12D 8017647 YP_002980009.1 CDS Rpic12D_0025 NC_012856.1 29521 30135 D PFAM: Glutathione S-transferase domain; KEGG: rso:RSc0129 hypothetical protein; glutathione S-transferase 29521..30135 Ralstonia pickettii 12D 8017648 YP_002980010.1 CDS Rpic12D_0026 NC_012856.1 30143 31291 R PFAM: HPP family protein; CBS domain containing protein; SMART: CBS domain containing protein; KEGG: rso:RSc0130 hypothetical protein; hypothetical protein complement(30143..31291) Ralstonia pickettii 12D 8017649 YP_002980011.1 CDS Rpic12D_0027 NC_012856.1 31524 33509 D KEGG: rso:RSc0131 lipoprotein; TIGRFAM: autotransporter-associated beta strand repeat protein; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; autotransporter-associated beta strand repeat-containing protein 31524..33509 Ralstonia pickettii 12D 8017650 YP_002980012.1 CDS Rpic12D_0028 NC_012856.1 33530 34369 R PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rso:RSc0132 transcription regulator protein; AraC family transcriptional regulator complement(33530..34369) Ralstonia pickettii 12D 8017651 YP_002980013.1 CDS Rpic12D_0029 NC_012856.1 34681 34974 D PFAM: GYD family protein; KEGG: rso:RSc0133 hypothetical protein; GYD family protein 34681..34974 Ralstonia pickettii 12D 8017652 YP_002980014.1 CDS Rpic12D_0030 NC_012856.1 35045 36235 R catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase complement(35045..36235) Ralstonia pickettii 12D 8017653 YP_002980015.1 CDS Rpic12D_0031 NC_012856.1 36475 37323 D Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase 36475..37323 Ralstonia pickettii 12D 8017654 YP_002980016.1 CDS Rpic12D_0032 NC_012856.1 37337 38230 D Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase 37337..38230 Ralstonia pickettii 12D 8017655 YP_002980017.1 CDS dapF NC_012856.1 38320 39198 D involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 38320..39198 Ralstonia pickettii 12D 8017656 YP_002980018.1 CDS Rpic12D_0034 NC_012856.1 39246 40073 D PFAM: protein of unknown function DUF344; KEGG: rso:RSc0138 hypothetical protein; hypothetical protein 39246..40073 Ralstonia pickettii 12D 8017657 YP_002980019.1 CDS pyrE NC_012856.1 40199 40876 R involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase complement(40199..40876) Ralstonia pickettii 12D 8017658 YP_002980020.1 CDS Rpic12D_0036 NC_012856.1 40910 41695 D KEGG: rso:RSc0140 exodeoxyribonuclease III protein; TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III Xth 40910..41695 Ralstonia pickettii 12D 8017659 YP_002980021.1 CDS Rpic12D_0037 NC_012856.1 41823 42836 D catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; N-acetyl-gamma-glutamyl-phosphate reductase 41823..42836 Ralstonia pickettii 12D 8017660 YP_002980022.1 CDS Rpic12D_0038 NC_012856.1 42908 43816 R PFAM: band 7 protein; KEGG: rso:RSc0145 transmembrane protein; hypothetical protein complement(42908..43816) Ralstonia pickettii 12D 8017661 YP_002980023.1 CDS Rpic12D_0039 NC_012856.1 44125 44880 R PFAM: protein of unknown function DUF218; KEGG: rso:RSc0146 lipoprotein transmembrane; hypothetical protein complement(44125..44880) Ralstonia pickettii 12D 8017662 YP_002980024.1 CDS Rpic12D_0040 NC_012856.1 45002 45607 R KEGG: rso:RSc0148 hypothetical protein; hypothetical protein complement(45002..45607) Ralstonia pickettii 12D 8017663 YP_002980025.1 CDS Rpic12D_0041 NC_012856.1 45633 46145 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rso:RSc0149 transcription regulator protein; MarR family transcriptional regulator complement(45633..46145) Ralstonia pickettii 12D 8017664 YP_002980026.1 CDS Rpic12D_0042 NC_012856.1 46363 47271 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RSc0151 transmembrane protein; hypothetical protein 46363..47271 Ralstonia pickettii 12D 8017665 YP_002980027.1 CDS Rpic12D_0043 NC_012856.1 47280 48224 R PFAM: peptidase M48 Ste24p; KEGG: rso:RSc0153 signal peptide protein; peptidase M48 Ste24p complement(47280..48224) Ralstonia pickettii 12D 8017666 YP_002980028.1 CDS ampG NC_012856.1 48322 49611 D PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc0154 muropeptide transporter; muropeptide transporter 48322..49611 Ralstonia pickettii 12D 8017667 YP_002980029.1 CDS Rpic12D_0045 NC_012856.1 49616 50809 R PFAM: protein of unknown function DUF185; KEGG: rso:RSc0155 hypothetical protein; hypothetical protein complement(49616..50809) Ralstonia pickettii 12D 8017668 YP_002980030.1 CDS Rpic12D_0046 NC_012856.1 50826 51644 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rso:RSc0156 short chain dehydrogenase; short chain dehydrogenase 50826..51644 Ralstonia pickettii 12D 8017669 YP_002980031.1 CDS Rpic12D_0047 NC_012856.1 51664 52062 D PFAM: dihydroneopterin aldolase; KEGG: rso:RSc0157 hypothetical protein; dihydroneopterin aldolase 51664..52062 Ralstonia pickettii 12D 8017670 YP_002980032.1 CDS Rpic12D_0048 NC_012856.1 52342 53271 R PFAM: arginase/agmatinase/formiminoglutamase; KEGG: rso:RSc0158 arginase; arginase/agmatinase/formiminoglutamase complement(52342..53271) Ralstonia pickettii 12D 8017671 YP_002980033.1 CDS Rpic12D_0049 NC_012856.1 53297 54523 R TIGRFAM: ornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: rso:RSc0159 acetylornithine aminotransferase protein; ornithine aminotransferase complement(53297..54523) Ralstonia pickettii 12D 8017672 YP_002980034.1 CDS Rpic12D_0050 NC_012856.1 54653 55576 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc0160 transcription regulator protein; LysR family transcriptional regulator 54653..55576 Ralstonia pickettii 12D 8017673 YP_002980035.1 CDS Rpic12D_0051 NC_012856.1 55663 56415 D PFAM: regulatory protein TetR; KEGG: rso:RSc0162 transcription regulator protein; TetR family transcriptional regulator 55663..56415 Ralstonia pickettii 12D 8017674 YP_002980036.1 CDS Rpic12D_0052 NC_012856.1 56464 57438 D PFAM: secretion protein HlyD family protein; KEGG: rso:RSc0163 lipoprotein; secretion protein HlyD family protein 56464..57438 Ralstonia pickettii 12D 8017675 YP_002980037.1 CDS Rpic12D_0053 NC_012856.1 57435 58415 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RSc0164 ABC transporter ATP-binding protein; ABC transporter 57435..58415 Ralstonia pickettii 12D 8017676 YP_002980038.1 CDS Rpic12D_0054 NC_012856.1 58412 59578 D PFAM: ABC transporter; KEGG: rso:RSc0165 hypothetical protein; ABC transporter 58412..59578 Ralstonia pickettii 12D 8017677 YP_002980039.1 CDS Rpic12D_0055 NC_012856.1 59586 61325 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rso:RSc0166 outer membrane channel lipoprotein; NodT family RND efflux system outer membrane lipoprotein 59586..61325 Ralstonia pickettii 12D 8017678 YP_002980040.1 CDS Rpic12D_0056 NC_012856.1 61347 61613 R PFAM: PAAR repeat-containing protein; KEGG: bam:Bamb_0211 PaaR repeat-containing protein; PAAR repeat-containing protein complement(61347..61613) Ralstonia pickettii 12D 8017679 YP_002980041.1 CDS Rpic12D_0057 NC_012856.1 61619 62281 R KEGG: reh:H16_B0856 hypothetical protein; hypothetical protein complement(61619..62281) Ralstonia pickettii 12D 8017680 YP_002980042.1 CDS Rpic12D_0058 NC_012856.1 62278 63408 R KEGG: reh:H16_B0855 hypothetical protein; hypothetical protein complement(62278..63408) Ralstonia pickettii 12D 8017681 YP_002980043.1 CDS Rpic12D_0059 NC_012856.1 63405 63587 R KEGG: reh:H16_B0854 hypothetical protein; hypothetical protein complement(63405..63587) Ralstonia pickettii 12D 8017682 YP_002980044.1 CDS Rpic12D_0060 NC_012856.1 63584 64723 R KEGG: reh:H16_B0855 hypothetical protein; hypothetical protein complement(63584..64723) Ralstonia pickettii 12D 8017683 YP_002980045.1 CDS Rpic12D_0061 NC_012856.1 64720 64902 R KEGG: reh:H16_B0854 hypothetical protein; hypothetical protein complement(64720..64902) Ralstonia pickettii 12D 8017684 YP_002980046.1 CDS Rpic12D_0062 NC_012856.1 64899 66029 R KEGG: reh:H16_B0855 hypothetical protein; hypothetical protein complement(64899..66029) Ralstonia pickettii 12D 8017685 YP_002980047.1 CDS Rpic12D_0063 NC_012856.1 66026 68614 R KEGG: reh:H16_A0029 hypothetical membrane anchored protein; hypothetical protein complement(66026..68614) Ralstonia pickettii 12D 8017686 YP_002980048.1 CDS Rpic12D_0064 NC_012856.1 68619 69515 R KEGG: reh:H16_A0028 hypothetical protein; hypothetical protein complement(68619..69515) Ralstonia pickettii 12D 8017687 YP_002980049.1 CDS Rpic12D_0065 NC_012856.1 69524 71992 R TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: reh:H16_A0626 VgrG protein, uncharacterized protein conserved in bacteria; ImpA family type VI secretion-associated protein complement(69524..71992) Ralstonia pickettii 12D 8017688 YP_002980050.1 CDS Rpic12D_0066 NC_012856.1 72152 72316 D KEGG: rso:RSc0166 outer membrane channel lipoprotein; outer membrane channel lipoprotein 72152..72316 Ralstonia pickettii 12D 8017689 YP_002980051.1 CDS Rpic12D_0067 NC_012856.1 72598 73563 R KEGG: rso:RSc0174 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein; 2-dehydropantoate 2-reductase complement(72598..73563) Ralstonia pickettii 12D 8017690 YP_002980052.1 CDS Rpic12D_0068 NC_012856.1 73718 74665 D TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase 73718..74665 Ralstonia pickettii 12D 8017691 YP_002980053.1 CDS Rpic12D_0069 NC_012856.1 75003 76370 D TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: rso:RSc0177 UDP-N-acetylglucosamine pyrophosphorylase protein; UDP-N-acetylglucosamine pyrophosphorylase 75003..76370 Ralstonia pickettii 12D 8017692 YP_002980054.1 CDS Rpic12D_0070 NC_012856.1 76487 78325 D Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 76487..78325 Ralstonia pickettii 12D 8017693 YP_002980055.1 CDS Rpic12D_0072 NC_012856.1 78884 79156 D hypothetical protein 78884..79156 Ralstonia pickettii 12D 8017695 YP_002980056.1 CDS Rpic12D_0073 NC_012856.1 79265 80185 D PFAM: Patatin; KEGG: rso:RSc0221 hypothetical protein; patatin 79265..80185 Ralstonia pickettii 12D 8017696 YP_002980057.1 CDS Rpic12D_0074 NC_012856.1 80300 81313 D TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: bte:BTH_II1160 alcohol dehydrogenase, zinc-containing; zinc-binding alcohol dehydrogenase family protein 80300..81313 Ralstonia pickettii 12D 8017697 YP_002980058.1 CDS Rpic12D_0075 NC_012856.1 81315 82229 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bte:BTH_II1158 LysR family transcriptional regulator; LysR family transcriptional regulator complement(81315..82229) Ralstonia pickettii 12D 8017698 YP_002980059.1 CDS Rpic12D_0076 NC_012856.1 82396 84186 R PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: bcm:Bcenmc03_6147 thiamine pyrophosphate binding domain-containing protein; thiamine pyrophosphate protein TPP binding domain-containing protein complement(82396..84186) Ralstonia pickettii 12D 8017699 YP_002980060.1 CDS Rpic12D_0077 NC_012856.1 84239 84715 R PFAM: hemerythrin HHE cation-binding protein; KEGG: azo:azo0331 hypothetical protein; hemerythrin HHE cation binding domain-containing protein complement(84239..84715) Ralstonia pickettii 12D 8017700 YP_002980061.1 CDS Rpic12D_0078 NC_012856.1 84912 85382 D PFAM: PRC-barrel domain protein; KEGG: bac:BamMC406_6353 PRC-barrel domain-containing protein; PRC-barrel domain-containing protein 84912..85382 Ralstonia pickettii 12D 8017701 YP_002980062.1 CDS Rpic12D_0079 NC_012856.1 85444 85632 D KEGG: bxe:Bxe_B1328 hypothetical protein; hypothetical protein 85444..85632 Ralstonia pickettii 12D 8017702 YP_002980063.1 CDS Rpic12D_0080 NC_012856.1 85700 86053 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sme:SMc01667 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase complement(85700..86053) Ralstonia pickettii 12D 8017703 YP_002980064.1 CDS Rpic12D_0081 NC_012856.1 86180 87388 D PFAM: aminotransferase class I and II; KEGG: rso:RSc0229 amino transferase protein; GntR family transcriptional regulator 86180..87388 Ralstonia pickettii 12D 8017704 YP_002980065.1 CDS Rpic12D_0082 NC_012856.1 87407 87913 D PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bpy:Bphyt_0841 transcriptional regulator, AraC family; AraC family transcriptional regulator 87407..87913 Ralstonia pickettii 12D 8017705 YP_002980066.1 CDS Rpic12D_0083 NC_012856.1 87913 88329 D PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_A1507 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 87913..88329 Ralstonia pickettii 12D 8017706 YP_002980067.1 CDS Rpic12D_0084 NC_012856.1 88326 88580 D KEGG: mes:Meso_0629 hypothetical protein; hypothetical protein 88326..88580 Ralstonia pickettii 12D 8017707 YP_002980068.1 CDS Rpic12D_0085 NC_012856.1 89056 90252 R PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_6200 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(89056..90252) Ralstonia pickettii 12D 8017708 YP_002980069.1 CDS Rpic12D_0086 NC_012856.1 90315 90740 R PFAM: Glutathione S-transferase domain; KEGG: bbr:BB2888 glutathione transferase; glutathione S-transferase complement(90315..90740) Ralstonia pickettii 12D 8017709 YP_002980070.1 CDS Rpic12D_0088 NC_012856.1 91610 92257 R PFAM: lysine exporter protein (LYSE/YGGA); KEGG: rso:RSc0231 (homoserine/homoserine lactone) efflux transmembrane protein; Lysine exporter protein LysE/YggA complement(91610..92257) Ralstonia pickettii 12D 8017711 YP_002980071.1 CDS Rpic12D_0089 NC_012856.1 92560 93810 R PFAM: transposase mutator type; KEGG: rso:RSp0478 ISRSO7-transposase protein; transposase mutator type complement(92560..93810) Ralstonia pickettii 12D 8017712 YP_002980072.1 CDS Rpic12D_0090 NC_012856.1 94253 95233 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RSc0233 integral membrane transmembrane protein; hypothetical protein complement(94253..95233) Ralstonia pickettii 12D 8017713 YP_002980073.1 CDS Rpic12D_0091 NC_012856.1 95340 96062 R PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rso:RSc0234 transcription regulator protein; AraC family transcriptional regulator complement(95340..96062) Ralstonia pickettii 12D 8017714 YP_002980074.1 CDS Rpic12D_0092 NC_012856.1 96226 96582 R PFAM: protein of unknown function DUF427; KEGG: rso:RSc0235 hypothetical protein; hypothetical protein complement(96226..96582) Ralstonia pickettii 12D 8017715 YP_002980075.1 CDS Rpic12D_0093 NC_012856.1 96662 97864 R PFAM: Rh family protein/ammonium transporter; KEGG: rme:Rmet_4750 Rh-like protein/ammonium transporter; Rh family protein/ammonium transporter complement(96662..97864) Ralstonia pickettii 12D 8017716 YP_002980076.1 CDS Rpic12D_0094 NC_012856.1 98122 99135 R KEGG: rso:RSc0236 hypothetical protein; hypothetical protein complement(98122..99135) Ralstonia pickettii 12D 8017717 YP_002980077.1 CDS Rpic12D_0095 NC_012856.1 99477 102764 D KEGG: rso:RSc0237 methylmalonyl-CoA mutase protein; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein; ArgK protein; methylmalonyl-CoA mutase large subunit 99477..102764 Ralstonia pickettii 12D 8017718 YP_002980078.1 CDS Rpic12D_0096 NC_012856.1 103472 104326 D converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; 3-hydroxybutyryl-CoA dehydrogenase 103472..104326 Ralstonia pickettii 12D 8017719 YP_002980079.1 CDS Rpic12D_0097 NC_012856.1 104482 105339 D TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: rso:RSc0253 hypothetical protein; phenazine biosynthesis protein PhzF family 104482..105339 Ralstonia pickettii 12D 8017720 YP_002980080.1 CDS Rpic12D_0098 NC_012856.1 105348 105896 R PFAM: GCN5-related N-acetyltransferase; KEGG: bpl:BURPS1106A_3175 acetyltransferase; N-acetyltransferase GCN5 complement(105348..105896) Ralstonia pickettii 12D 8017721 YP_002980081.1 CDS Rpic12D_0099 NC_012856.1 105896 106480 R PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bph:Bphy_4180 XRE family transcriptional regulator; XRE family transcriptional regulator complement(105896..106480) Ralstonia pickettii 12D 8017722 YP_002980082.1 CDS Rpic12D_0100 NC_012856.1 106648 107550 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bur:Bcep18194_B0171 LysR family transcriptional regulator; LysR family transcriptional regulator complement(106648..107550) Ralstonia pickettii 12D 8017723 YP_002980083.1 CDS Rpic12D_0101 NC_012856.1 107783 108325 D KEGG: bur:Bcep18194_B0172 hypothetical protein; hypothetical protein 107783..108325 Ralstonia pickettii 12D 8017724 YP_002980084.1 CDS Rpic12D_0102 NC_012856.1 108395 109858 R PFAM: protein of unknown function DUF1254; protein of unknown function DUF1214; KEGG: rso:RSc0254 hypothetical protein; hypothetical protein complement(108395..109858) Ralstonia pickettii 12D 8017725 YP_002980085.1 CDS Rpic12D_0103 NC_012856.1 110070 111053 R PFAM: 2-nitropropane dioxygenase NPD; KEGG: rso:RSc0255 hypothetical protein; 2-nitropropane dioxygenase complement(110070..111053) Ralstonia pickettii 12D 8017726 YP_002980086.1 CDS Rpic12D_0104 NC_012856.1 111154 111702 R TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: bxe:Bxe_B1164 peptidase C56, PfpI; PfpI family intracellular protease complement(111154..111702) Ralstonia pickettii 12D 8017727 YP_002980087.1 CDS Rpic12D_0105 NC_012856.1 111839 112765 D PFAM: alpha/beta hydrolase fold; KEGG: rso:RSc0256 haloacetate dehalogenase H-1 protein; alpha/beta hydrolase fold protein 111839..112765 Ralstonia pickettii 12D 8017728 YP_002980088.1 CDS Rpic12D_0106 NC_012856.1 112775 113458 R PFAM: 2OG-Fe(II) oxygenase; SMART: prolyl 4-hydroxylase alpha subunit; KEGG: bpm:BURPS1710b_A0200 hydroxylase; 2OG-Fe(II) oxygenase complement(112775..113458) Ralstonia pickettii 12D 8017729 YP_002980089.1 CDS Rpic12D_0107 NC_012856.1 113449 114210 R PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; KEGG: bxe:Bxe_B0793 hypothetical protein; Sel1 domain-containing protein repeat-containing protein complement(113449..114210) Ralstonia pickettii 12D 8017730 YP_002980090.1 CDS Rpic12D_0108 NC_012856.1 114210 116489 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bxe:Bxe_B0794 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor complement(114210..116489) Ralstonia pickettii 12D 8017731 YP_002980091.1 CDS Rpic12D_0109 NC_012856.1 116763 117542 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 116763..117542 Ralstonia pickettii 12D 8017732 YP_002980092.1 CDS Rpic12D_0110 NC_012856.1 117544 119316 D PFAM: protein of unknown function DUF1446; KEGG: cti:RALTA_B0801 conserved hypothetical protein; DUF1446; hypothetical protein 117544..119316 Ralstonia pickettii 12D 8017733 YP_002980093.1 CDS Rpic12D_0111 NC_012856.1 119331 120485 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: reu:Reut_B5206 acyl-CoA dehydrogenase, C-terminal:acyl-CoA dehydrogenase, central region:acyl-CoA dehydrogenase, N-terminal; acyl-CoA dehydrogenase domain-containing protein 119331..120485 Ralstonia pickettii 12D 8017734 YP_002980094.1 CDS Rpic12D_0112 NC_012856.1 120507 121394 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rfr:Rfer_3507 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 120507..121394 Ralstonia pickettii 12D 8017735 YP_002980095.1 CDS Rpic12D_0113 NC_012856.1 121381 123000 D PFAM: carboxyl transferase; KEGG: bps:BPSS2031 acetyl-CoA carboxylase carboxyltransferase; carboxyl transferase 121381..123000 Ralstonia pickettii 12D 8017736 YP_002980096.1 CDS Rpic12D_0114 NC_012856.1 123061 124218 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: vei:Veis_1896 acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase domain-containing protein 123061..124218 Ralstonia pickettii 12D 8017737 YP_002980097.1 CDS Rpic12D_0115 NC_012856.1 124222 126216 D PFAM: carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; biotin/lipoyl attachment domain-containing protein; carbamoyl-phosphate synthetase large chain domain protein; KEGG: reu:Reut_B4460 carbamoyl-phosphate synthase subunit L; carbamoyl-phosphate synthase L chain ATP-binding 124222..126216 Ralstonia pickettii 12D 8017738 YP_002980098.1 CDS Rpic12D_0116 NC_012856.1 126302 127888 D PFAM: AMP-dependent synthetase and ligase; KEGG: rpb:RPB_3261 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 126302..127888 Ralstonia pickettii 12D 8017739 YP_002980099.1 CDS Rpic12D_0117 NC_012856.1 127895 128572 R PFAM: regulatory protein TetR; KEGG: bpd:BURPS668_A2924 TetR family transcriptional regulator; TetR family transcriptional regulator complement(127895..128572) Ralstonia pickettii 12D 8017740 YP_002980100.1 CDS Rpic12D_0118 NC_012856.1 128634 129587 R PFAM: beta-lactamase domain protein; KEGG: rso:RSc0258 beta lactamase protein; beta-lactamase domain-containing protein complement(128634..129587) Ralstonia pickettii 12D 8017741 YP_002980101.1 CDS Rpic12D_0119 NC_012856.1 129600 129866 R PFAM: protein of unknown function DUF1289; KEGG: rso:RSc0259 hypothetical protein; hypothetical protein complement(129600..129866) Ralstonia pickettii 12D 8017742 YP_002980102.1 CDS Rpic12D_0120 NC_012856.1 129877 130377 R PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: rso:RSc0260 hypothetical protein; YbaK/prolyl-tRNA synthetase associated domain-containing protein complement(129877..130377) Ralstonia pickettii 12D 8017743 YP_002980103.1 CDS Rpic12D_0121 NC_012856.1 130399 131328 R catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA; hydroxymethylglutaryl-CoA lyase complement(130399..131328) Ralstonia pickettii 12D 8017744 YP_002980104.1 CDS Rpic12D_0122 NC_012856.1 131330 132271 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: rso:RSc0262 2-hydroxyacid dehydrogenase oxidoreductase protein; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase complement(131330..132271) Ralstonia pickettii 12D 8017745 YP_002980105.1 CDS Rpic12D_0123 NC_012856.1 132358 134382 R PFAM: carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; phosphoribosylglycinamide synthetase; biotin/lipoyl attachment domain-containing protein; carbamoyl-phosphate synthetase large chain domain protein; KEGG: rso:RSc0265 acyl-CoA carboxylase subunit alpha; carbamoyl-phosphate synthase L chain ATP-binding complement(132358..134382) Ralstonia pickettii 12D 8017746 YP_002980106.1 CDS Rpic12D_0124 NC_012856.1 134510 135067 D KEGG:.; hypothetical protein 134510..135067 Ralstonia pickettii 12D 8017747 YP_002980107.1 CDS Rpic12D_0125 NC_012856.1 135051 136139 R KEGG: rso:RSc0266 biotin synthase protein; TIGRFAM: biotin synthase; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; biotin synthase complement(135051..136139) Ralstonia pickettii 12D 8017748 YP_002980108.1 CDS Rpic12D_0126 NC_012856.1 136183 136977 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(136183..136977) Ralstonia pickettii 12D 8017749 YP_002980109.1 CDS Rpic12D_0127 NC_012856.1 136974 137909 R KEGG: rso:RSc0268 signal peptide protein; signal peptide protein complement(136974..137909) Ralstonia pickettii 12D 8017750 YP_002980110.1 CDS Rpic12D_0128 NC_012856.1 137939 139546 R PFAM: carboxyl transferase; KEGG: rso:RSc0269 propionyl-CoA carboxylase (beta subunit) protein; propionyl-CoA carboxylase complement(137939..139546) Ralstonia pickettii 12D 8017751 YP_002980111.1 CDS Rpic12D_0129 NC_012856.1 139575 140015 R KEGG: rso:RSc0270 hypothetical protein; hypothetical protein complement(139575..140015) Ralstonia pickettii 12D 8017752 YP_002980112.1 CDS Rpic12D_0130 NC_012856.1 140015 140713 R TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rso:RSc0271 hypothetical protein; HAD-superfamily hydrolase complement(140015..140713) Ralstonia pickettii 12D 8017753 YP_002980113.1 CDS Rpic12D_0131 NC_012856.1 140777 141382 R PFAM: DSBA oxidoreductase; KEGG: rso:RSc0273 2-hydroxychromene-2-carboxylate isomerase protein; DSBA oxidoreductase complement(140777..141382) Ralstonia pickettii 12D 8017754 YP_002980114.1 CDS Rpic12D_0132 NC_012856.1 141425 142555 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rso:RSc0274 acyl CoA dehydrogenase oxidoreductase protein; acyl-CoA dehydrogenase domain-containing protein complement(141425..142555) Ralstonia pickettii 12D 8017755 YP_002980115.1 CDS Rpic12D_0133 NC_012856.1 142566 143279 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rso:RSc0275 short chain dehydrogenase; short chain dehydrogenase complement(142566..143279) Ralstonia pickettii 12D 8017756 YP_002980116.1 CDS Rpic12D_0134 NC_012856.1 143289 144470 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(143289..144470) Ralstonia pickettii 12D 8017757 YP_002980117.1 CDS Rpic12D_0135 NC_012856.1 145158 145838 R PFAM: carbonic anhydrase; KEGG: rso:RSc0277 carbonic anhydrase protein; carbonate dehydratase complement(145158..145838) Ralstonia pickettii 12D 8017758 YP_002980118.1 CDS aceK NC_012856.1 145862 147697 R catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol; bifunctional isocitrate dehydrogenase kinase/phosphatase protein complement(145862..147697) Ralstonia pickettii 12D 8017759 YP_002980119.1 CDS Rpic12D_0137 NC_012856.1 147853 149034 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: cti:RALTA_A0110 acyl-CoA dehydrogenase oxidoreductase; acyl-CoA dehydrogenase domain-containing protein complement(147853..149034) Ralstonia pickettii 12D 8017760 YP_002980120.1 CDS Rpic12D_0138 NC_012856.1 149212 149709 R PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR; KEGG: rso:RSc0280 transcription regulator protein; MerR family transcriptional regulator complement(149212..149709) Ralstonia pickettii 12D 8017761 YP_002980121.1 CDS Rpic12D_0139 NC_012856.1 149894 150973 D PFAM: beta-lactamase domain protein; KEGG: rso:RSc0281 hypothetical protein; beta-lactamase domain-containing protein 149894..150973 Ralstonia pickettii 12D 8017762 YP_002980122.1 CDS Rpic12D_0140 NC_012856.1 151007 151393 D PFAM: antibiotic biosynthesis monooxygenase; KEGG: rso:RSc0282 hypothetical protein; antibiotic biosynthesis monooxygenase 151007..151393 Ralstonia pickettii 12D 8017763 YP_002980123.1 CDS Rpic12D_0141 NC_012856.1 151459 152304 R KEGG: rso:RSc0283 hypothetical protein; hypothetical protein complement(151459..152304) Ralstonia pickettii 12D 8017764 YP_002980124.1 CDS Rpic12D_0142 NC_012856.1 152301 153101 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rso:RSc0284 short chain dehydrogenase; short chain dehydrogenase complement(152301..153101) Ralstonia pickettii 12D 8017765 YP_002980125.1 CDS Rpic12D_0143 NC_012856.1 153214 153870 R PFAM: DSBA oxidoreductase; KEGG: rso:RSc0285 thiol:disulfide interchange signal peptide protein; DSBA oxidoreductase complement(153214..153870) Ralstonia pickettii 12D 8017766 YP_002980126.1 CDS Rpic12D_0144 NC_012856.1 154031 154741 R PFAM: sporulation protein; KEGG: rso:RSc0286 hypothetical protein; sporulation domain-containing protein complement(154031..154741) Ralstonia pickettii 12D 8017767 YP_002980127.1 CDS argS NC_012856.1 154802 156592 R catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase complement(154802..156592) Ralstonia pickettii 12D 8017768 YP_002980128.1 CDS Rpic12D_0146 NC_012856.1 156767 157090 D PFAM: Domain of unknown function DUF1840; KEGG: rso:RSc0288 hypothetical protein; hypothetical protein 156767..157090 Ralstonia pickettii 12D 8017769 YP_002980129.1 CDS Rpic12D_0147 NC_012856.1 157220 157777 R PFAM: Ferritin Dps family protein; Rubrerythrin; KEGG: cti:RALTA_A1787 bacterioferritin; ferritin Dps family protein complement(157220..157777) Ralstonia pickettii 12D 8017770 YP_002980130.1 CDS Rpic12D_0148 NC_012856.1 157810 158235 R PFAM: protein of unknown function DUF883 ElaB; KEGG: reu:Reut_A0125 hypothetical protein; hypothetical protein complement(157810..158235) Ralstonia pickettii 12D 8017771 YP_002980131.1 CDS Rpic12D_0149 NC_012856.1 158381 158554 R PFAM: protein of unknown function DUF1328; KEGG: cak:Caul_4145 hypothetical protein; hypothetical protein complement(158381..158554) Ralstonia pickettii 12D 8017772 YP_002980132.1 CDS Rpic12D_0150 NC_012856.1 158738 160195 D PFAM: CHASE3 domain protein; histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: rso:RSc0289 transmembrane sensor kinase VsrA transcription regulator protein; histidine kinase 158738..160195 Ralstonia pickettii 12D 8017773 YP_002980133.1 CDS Rpic12D_0151 NC_012856.1 160277 160417 R PFAM: entericidin EcnAB; KEGG: rso:RSc0290 entericidin precursor lipoprotein; entericidin EcnAB complement(160277..160417) Ralstonia pickettii 12D 8017774 YP_002980134.1 CDS Rpic12D_0152 NC_012856.1 160490 160930 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: rso:RSc0291 transcription regulator protein; response regulator receiver protein complement(160490..160930) Ralstonia pickettii 12D 8017775 YP_002980135.1 CDS Rpic12D_0153 NC_012856.1 161033 161665 R PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: rso:RSc0292 response regulator transcription regulator protein; two component LuxR family transcriptional regulator complement(161033..161665) Ralstonia pickettii 12D 8017776 YP_002980136.1 CDS Rpic12D_0154 NC_012856.1 161965 162390 R KEGG: rso:RSc0293 signal peptide protein; signal peptide protein complement(161965..162390) Ralstonia pickettii 12D 8017777 YP_002980137.1 CDS Rpic12D_0155 NC_012856.1 162631 165348 R KEGG: rso:RSc0294 5-methyltetrahydrofolate--homocysteine methyltransferase; TIGRFAM: methionine synthase; PFAM: dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; Vitamin B12 dependent methionine synthase activation region; methionine synthase complement(162631..165348) Ralstonia pickettii 12D 8017778 YP_002980138.1 CDS Rpic12D_0156 NC_012856.1 165399 166439 R PFAM: homocysteine S-methyltransferase; KEGG: rso:RSc0295 5-methyltetrahydrofolate--homocysteine methyltransferase; homocysteine S-methyltransferase complement(165399..166439) Ralstonia pickettii 12D 8017779 YP_002980139.1 CDS Rpic12D_0157 NC_012856.1 166591 166983 D PFAM: rhodanese; SMART: rhodanese; KEGG: rso:RSc0296 hypothetical protein; rhodanese domain-containing protein 166591..166983 Ralstonia pickettii 12D 8017780 YP_002980140.1 CDS Rpic12D_0158 NC_012856.1 167096 167353 R KEGG: rso:RSc0297 hypothetical protein; hypothetical protein complement(167096..167353) Ralstonia pickettii 12D 8017781 YP_002980141.1 CDS Rpic12D_0159 NC_012856.1 167673 168512 R PFAM: alpha/beta hydrolase fold; KEGG: rso:RSc0298 B-ketoadipate enol-lactone hydrolase protein; alpha/beta hydrolase fold protein complement(167673..168512) Ralstonia pickettii 12D 8017782 YP_002980142.1 CDS Rpic12D_0160 NC_012856.1 168514 169548 R KEGG: rso:RSc0299 prolin-rich signal peptide protein; prolin-rich signal peptide protein complement(168514..169548) Ralstonia pickettii 12D 8017783 YP_002980143.1 CDS Rpic12D_0161 NC_012856.1 169613 170485 R PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: rso:RSc0300 transcription regulator protein; IclR family transcriptional regulator complement(169613..170485) Ralstonia pickettii 12D 8017784 YP_002980144.1 CDS Rpic12D_0162 NC_012856.1 170568 171560 D PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rso:RSc0301 hypothetical protein; fumarylacetoacetate (FAA) hydrolase 170568..171560 Ralstonia pickettii 12D 8017785 YP_002980145.1 CDS Rpic12D_0163 NC_012856.1 171570 172478 R PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: rso:RSc0302 transcription regulator protein; IclR family transcriptional regulator complement(171570..172478) Ralstonia pickettii 12D 8017786 YP_002980146.1 CDS Rpic12D_0164 NC_012856.1 172585 173589 D PFAM: Luciferase-like monooxygenase; KEGG: sso:SSO1532 hypothetical protein; luciferase-like monooxygenase 172585..173589 Ralstonia pickettii 12D 8017787 YP_002980147.1 CDS Rpic12D_0165 NC_012856.1 173674 174837 D PFAM: extracellular ligand-binding receptor; KEGG: bxe:Bxe_A4234 branched chain amino acid ABC transporter periplasmic ligand-binding protein; extracellular ligand-binding receptor 173674..174837 Ralstonia pickettii 12D 8017788 YP_002980148.1 CDS Rpic12D_0166 NC_012856.1 174906 175724 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 174906..175724 Ralstonia pickettii 12D 8017789 YP_002980149.1 CDS Rpic12D_0167 NC_012856.1 175781 176668 D KEGG: rso:RSc0305 hypothetical protein; hypothetical protein 175781..176668 Ralstonia pickettii 12D 8017790 YP_002980150.1 CDS Rpic12D_0168 NC_012856.1 176672 177856 D PFAM: Patatin; KEGG: rso:RSc0306 hypothetical protein; patatin 176672..177856 Ralstonia pickettii 12D 8017791 YP_002980151.1 CDS Rpic12D_0169 NC_012856.1 177857 178552 R PFAM: glutathione peroxidase; KEGG: rso:RSc0307 glutathione peroxidase transmembrane protein; glutathione peroxidase complement(177857..178552) Ralstonia pickettii 12D 8017792 YP_002980152.1 CDS Rpic12D_0170 NC_012856.1 178958 179812 D KEGG: rso:RSc0308 hypothetical protein; hypothetical protein 178958..179812 Ralstonia pickettii 12D 8017793 YP_002980153.1 CDS Rpic12D_0171 NC_012856.1 179848 180384 D TIGRFAM: rfaE bifunctional protein; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; KEGG: rso:RSc0309 transferase protein; bifunctional protein RfaE 179848..180384 Ralstonia pickettii 12D 8017794 YP_002980154.1 CDS Rpic12D_0172 NC_012856.1 180389 181168 R PFAM: sporulation protein; KEGG: rso:RSc0310 signal peptide protein; sporulation domain-containing protein complement(180389..181168) Ralstonia pickettii 12D 8017795 YP_002980155.1 CDS Rpic12D_0173 NC_012856.1 181270 182151 R type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase complement(181270..182151) Ralstonia pickettii 12D 8017796 YP_002980156.1 CDS Rpic12D_0174 NC_012856.1 182148 183029 R catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase complement(182148..183029) Ralstonia pickettii 12D 8017797 YP_002980157.1 CDS Rpic12D_0175 NC_012856.1 183216 184340 D PFAM: protein of unknown function DUF140; KEGG: rso:RSc0313 hypothetical protein; hypothetical protein 183216..184340 Ralstonia pickettii 12D 8017798 YP_002980158.1 CDS Rpic12D_0176 NC_012856.1 184337 185215 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RSc0314 ABC transporter ATP-binding protein; ABC transporter 184337..185215 Ralstonia pickettii 12D 8017799 YP_002980159.1 CDS Rpic12D_0177 NC_012856.1 185215 186183 D PFAM: mammalian cell entry related domain protein; KEGG: rso:RSc0315 signal peptide protein; mammalian cell entry domain-containing protein 185215..186183 Ralstonia pickettii 12D 8017800 YP_002980160.1 CDS Rpic12D_0178 NC_012856.1 186193 186858 D PFAM: protein of unknown function DUF330; KEGG: rso:RSc0316 lipoprotein; hypothetical protein 186193..186858 Ralstonia pickettii 12D 8017801 YP_002980161.1 CDS Rpic12D_0179 NC_012856.1 186897 188162 D PFAM: VanZ family protein; KEGG: rso:RSc0317 hypothetical protein; VanZ family protein 186897..188162 Ralstonia pickettii 12D 8017802 YP_002980162.1 CDS Rpic12D_0180 NC_012856.1 188150 189394 R PFAM: major facilitator superfamily MFS_1; KEGG: reu:Reut_B3681 major facilitator transporter; major facilitator superfamily protein complement(188150..189394) Ralstonia pickettii 12D 8017803 YP_002980163.1 CDS Rpic12D_0181 NC_012856.1 189391 191358 R PFAM: IucA/IucC family protein; KEGG: bbt:BBta_0635 siderophore biosynthesis protein; IucA/IucC family protein complement(189391..191358) Ralstonia pickettii 12D 8017804 YP_002980164.1 CDS Rpic12D_0182 NC_012856.1 191966 194068 D KEGG: rso:RSc0319 non-hemolytic phospholipase C signal peptide protein; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756; phosphocholine-specific phospholipase C 191966..194068 Ralstonia pickettii 12D 8017805 YP_002980165.1 CDS Rpic12D_0183 NC_012856.1 194451 194912 D KEGG: rso:RSc0320 hypothetical protein; hypothetical protein 194451..194912 Ralstonia pickettii 12D 8017806 YP_002980166.1 CDS Rpic12D_0184 NC_012856.1 194989 195990 R catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase complement(194989..195990) Ralstonia pickettii 12D 8017807 YP_002980167.1 CDS Rpic12D_0185 NC_012856.1 196033 196722 R lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B complement(196033..196722) Ralstonia pickettii 12D 8017808 YP_002980168.1 CDS Rpic12D_0186 NC_012856.1 196883 197242 R KEGG: rso:RSc0324 hypothetical protein; hypothetical protein complement(196883..197242) Ralstonia pickettii 12D 8017809 YP_002980169.1 CDS Rpic12D_0187 NC_012856.1 197393 198355 D glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; DNA-binding transcriptional activator GcvA 197393..198355 Ralstonia pickettii 12D 8017810 YP_002980170.1 CDS Rpic12D_0188 NC_012856.1 198427 198726 R PFAM: protein of unknown function DUF493; KEGG: rso:RSc0326 hypothetical protein; hypothetical protein complement(198427..198726) Ralstonia pickettii 12D 8017811 YP_002980171.1 CDS Rpic12D_0189 NC_012856.1 198747 199949 R PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; beta-lactamase; Penicillin-binding protein 5 domain protein; KEGG: rso:RSc0327 penicillin-binding transmembrane protein; serine-type D-Ala-D-Ala carboxypeptidase complement(198747..199949) Ralstonia pickettii 12D 8017812 YP_002980172.1 CDS Rpic12D_0190 NC_012856.1 200040 200687 R KEGG: rso:RSc0328 hypothetical protein; hypothetical protein complement(200040..200687) Ralstonia pickettii 12D 8017813 YP_002980173.1 CDS Rpic12D_0191 NC_012856.1 200723 201052 R KEGG: rso:RSc0329 ferredoxin 2Fe-2S protein; ferredoxin 2Fe-2S protein complement(200723..201052) Ralstonia pickettii 12D 8017814 YP_002980174.1 CDS Rpic12D_0192 NC_012856.1 201505 202794 D involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA 201505..202794 Ralstonia pickettii 12D 8017815 YP_002980175.1 CDS Rpic12D_0193 NC_012856.1 202896 204908 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rso:RSc0331 C4-dicarboxylate transport sensor kinase transcription regulator protein; histidine kinase 202896..204908 Ralstonia pickettii 12D 8017816 YP_002980176.1 CDS Rpic12D_0194 NC_012856.1 204934 206250 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: rso:RSc0332 C4-dicarboxylate transport response regulator transcription regulator protein; Fis family two component sigma-54 specific transcriptional regulator 204934..206250 Ralstonia pickettii 12D 8017817 YP_002980177.1 CDS Rpic12D_0195 NC_012856.1 206319 207056 R KEGG: bph:Bphy_5207 hypothetical protein; hypothetical protein complement(206319..207056) Ralstonia pickettii 12D 8017818 YP_002980178.1 CDS Rpic12D_0196 NC_012856.1 207194 207751 R PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: rso:RSc0333 transmembrane protein; redoxin domain-containing protein complement(207194..207751) Ralstonia pickettii 12D 8017819 YP_002980179.1 CDS Rpic12D_0197 NC_012856.1 207854 208369 R PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein; KEGG: rso:RSc0334 hypothetical protein; hypothetical protein complement(207854..208369) Ralstonia pickettii 12D 8017820 YP_002980180.1 CDS Rpic12D_0198 NC_012856.1 208489 209028 D KEGG: rso:RSc0335 transmembrane protein; hypothetical protein 208489..209028 Ralstonia pickettii 12D 8017821 YP_002980181.1 CDS Rpic12D_0199 NC_012856.1 209129 209770 D PFAM: lysine exporter protein (LYSE/YGGA); KEGG: reu:Reut_A0287 lysine exporter protein LysE/YggA; Lysine exporter protein LysE/YggA 209129..209770 Ralstonia pickettii 12D 8017822 YP_002980182.1 CDS Rpic12D_0201 NC_012856.1 210636 211307 D PFAM: TnsA endonuclease; KEGG: afe:Lferr_2137 TnsA endonuclease; TnsA endonuclease 210636..211307 Ralstonia pickettii 12D 8017824 YP_002980183.1 CDS Rpic12D_0202 NC_012856.1 211342 213234 D PFAM: integrase catalytic region; KEGG: pst:PSPTO_0058 transposase; Integrase catalytic subunit 211342..213234 Ralstonia pickettii 12D 8017825 YP_002980184.1 CDS Rpic12D_0203 NC_012856.1 213242 214132 D PFAM: TniB family protein; KEGG: msu:MS2015 hypothetical protein; TniB family protein 213242..214132 Ralstonia pickettii 12D 8017826 YP_002980185.1 CDS Rpic12D_0204 NC_012856.1 214129 215235 D KEGG: afe:Lferr_2128 hypothetical protein; hypothetical protein 214129..215235 Ralstonia pickettii 12D 8017827 YP_002980186.1 CDS Rpic12D_0205 NC_012856.1 215235 216665 D KEGG: afe:Lferr_2127 hypothetical protein; hypothetical protein 215235..216665 Ralstonia pickettii 12D 8017828 YP_002980187.1 CDS Rpic12D_0206 NC_012856.1 216728 217924 D TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; KEGG: dvu:DVU1746 C-5 cytosine-specific DNA methylase family protein; DNA-cytosine methyltransferase 216728..217924 Ralstonia pickettii 12D 8017829 YP_002980188.1 CDS Rpic12D_0207 NC_012856.1 218003 220915 R PFAM: UvrD/REP helicase; KEGG: paa:Paes_2313 UvrD/REP helicase; UvrD/REP helicase complement(218003..220915) Ralstonia pickettii 12D 8017830 YP_002980189.1 CDS Rpic12D_0208 NC_012856.1 221352 221747 R TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr; KEGG: gdj:Gdia_2656 DNA mismatch endonuclease Vsr; DNA mismatch endonuclease Vsr complement(221352..221747) Ralstonia pickettii 12D 8017831 YP_002980190.1 CDS Rpic12D_0209 NC_012856.1 221844 222791 R KEGG: dac:Daci_4706 hypothetical protein; hypothetical protein complement(221844..222791) Ralstonia pickettii 12D 8017832 YP_002980191.1 CDS Rpic12D_0210 NC_012856.1 222960 224780 R KEGG: bxe:Bxe_A1802 hypothetical protein; hypothetical protein complement(222960..224780) Ralstonia pickettii 12D 8017833 YP_002980192.1 CDS Rpic12D_0211 NC_012856.1 225020 226780 D KEGG: btk:BT9727_0843 ATPase; ATPase 225020..226780 Ralstonia pickettii 12D 8017834 YP_002980193.1 CDS Rpic12D_0212 NC_012856.1 226908 227342 R KEGG: rme:Rmet_2844 hypothetical protein; hypothetical protein complement(226908..227342) Ralstonia pickettii 12D 8017835 YP_002980194.1 CDS Rpic12D_0214 NC_012856.1 228787 229299 R KEGG: rso:RSc0339 hypothetical protein; hypothetical protein complement(228787..229299) Ralstonia pickettii 12D 8017837 YP_002980195.1 CDS Rpic12D_0215 NC_012856.1 229467 229724 R PFAM: protein of unknown function DUF526; KEGG: rso:RSc0340 hypothetical protein; hypothetical protein complement(229467..229724) Ralstonia pickettii 12D 8017838 YP_002980196.1 CDS Rpic12D_0216 NC_012856.1 230258 231073 D KEGG: rso:RSc0341 signal peptide protein; signal peptide protein 230258..231073 Ralstonia pickettii 12D 8017839 YP_002980197.1 CDS Rpic12D_0217 NC_012856.1 231120 231458 D PFAM: nitrogen regulatory protein P-II; KEGG: rso:RSc0342 nitrogen regulatory P-II transcription regulator protein; nitrogen regulatory protein P-II 231120..231458 Ralstonia pickettii 12D 8017840 YP_002980198.1 CDS Rpic12D_0218 NC_012856.1 231489 233063 D TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: reu:Reut_A0292 ammonium transporter; ammonium transporter 231489..233063 Ralstonia pickettii 12D 8017841 YP_002980199.1 CDS Rpic12D_0219 NC_012856.1 233432 234727 D TIGRFAM: glutamate/cysteine ligase; PFAM: glutamate--cysteine ligase GshA; KEGG: rso:RSc0344 hypothetical protein; glutamate/cysteine ligase 233432..234727 Ralstonia pickettii 12D 8017842 YP_002980200.1 CDS Rpic12D_0220 NC_012856.1 234760 235731 D catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 234760..235731 Ralstonia pickettii 12D 8017843 YP_002980201.1 CDS Rpic12D_0221 NC_012856.1 235850 236305 D PFAM: PTS system fructose subfamily IIA component; KEGG: rso:RSc0346 hypothetical protein; PTS system fructose subfamily transporter subunit IIA 235850..236305 Ralstonia pickettii 12D 8017844 YP_002980202.1 CDS Rpic12D_0222 NC_012856.1 236274 236543 D TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: rso:RSc0347 phosphohistidinoprotein-hexose phosphotransferase; phosphotransferase system, phosphocarrier protein HPr 236274..236543 Ralstonia pickettii 12D 8017845 YP_002980203.1 CDS Rpic12D_0223 NC_012856.1 236588 238339 D TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region; KEGG: rso:RSc0348 phosphoenolpyruvate-protein phosphotransferase transmembrane; phosphoenolpyruvate-protein phosphotransferase 236588..238339 Ralstonia pickettii 12D 8017846 YP_002980204.1 CDS Rpic12D_0224 NC_012856.1 238571 238846 D PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: rso:RSc0349 bacterioferritin-associated ferredoxin protein; BFD (2Fe-2S)-binding domain-containing protein 238571..238846 Ralstonia pickettii 12D 8017847 YP_002980205.1 CDS Rpic12D_0225 NC_012856.1 238996 239475 D TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; KEGG: rso:RSc0350 bacterioferritin; bacterioferritin 238996..239475 Ralstonia pickettii 12D 8017848 YP_002980206.1 CDS Rpic12D_0226 NC_012856.1 239541 240290 R PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: rso:RSc0351 molybdopterin biosynthesis protein MoeB; UBA/THIF-type NAD/FAD binding protein complement(239541..240290) Ralstonia pickettii 12D 8017849 YP_002980207.1 CDS Rpic12D_0227 NC_012856.1 240361 242013 R KEGG: rso:RSc0352 carboxy-terminal processing protease transmembrane protein; TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; carboxyl-terminal protease complement(240361..242013) Ralstonia pickettii 12D 8017850 YP_002980208.1 CDS gpmA NC_012856.1 242096 242851 R 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase complement(242096..242851) Ralstonia pickettii 12D 8017851 YP_002980209.1 CDS Rpic12D_0229 NC_012856.1 243020 243442 D PFAM: rhodanese; SMART: rhodanese; KEGG: rso:RSc0354 hypothetical protein; rhodanese domain-containing protein 243020..243442 Ralstonia pickettii 12D 8017852 YP_002980210.1 CDS Rpic12D_0230 NC_012856.1 243461 243718 D TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: rso:RSc0355 glutaredoxin 3 (GRX3) protein; glutaredoxin 3 243461..243718 Ralstonia pickettii 12D 8017853 YP_002980211.1 CDS Rpic12D_0231 NC_012856.1 243879 244397 D molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 243879..244397 Ralstonia pickettii 12D 8017854 YP_002980212.1 CDS gpsA NC_012856.1 244489 245520 D catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 244489..245520 Ralstonia pickettii 12D 8017855 YP_002980213.1 CDS Rpic12D_0233 NC_012856.1 245550 246020 R TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: rso:RSc0358 tRNA/rRNA methyltransferase protein; TrmH family RNA methyltransferase complement(245550..246020) Ralstonia pickettii 12D 8017856 YP_002980214.1 CDS Rpic12D_0234 NC_012856.1 246132 246854 R KEGG: rso:RSc0359 competence protein F-related protein; putative competence protein F-like protein complement(246132..246854) Ralstonia pickettii 12D 8017857 YP_002980215.1 CDS Rpic12D_0235 NC_012856.1 246963 247904 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rso:RSc0360 biotin synthesis protein (methyltransferase); type 11 methyltransferase 246963..247904 Ralstonia pickettii 12D 8017858 YP_002980216.1 CDS Rpic12D_0236 NC_012856.1 248097 248279 D KEGG: rso:RSc0361 hypothetical protein; hypothetical protein 248097..248279 Ralstonia pickettii 12D 8017859 YP_002980217.1 CDS Rpic12D_0237 NC_012856.1 248525 249781 D TIGRFAM: cytochrome C oxidase, subunit II; PFAM: cytochrome C oxidase subunit II; cytochrome C oxidase subunit II transmembrane region; cytochrome C class I; KEGG: rso:RSc0362 cytochrome C oxidase polypeptide II precursor (cytochrome AA3 subunit 2) transmembrane protein; cytochrome c oxidase subunit II 248525..249781 Ralstonia pickettii 12D 8017860 YP_002980218.1 CDS Rpic12D_0238 NC_012856.1 249822 251426 D KEGG: rso:RSc0363 cytochrome C oxidase polypeptide I; TIGRFAM: cytochrome C oxidase, subunit I; PFAM: cytochrome C oxidase subunit I; cytochrome c oxidase subunit I 249822..251426 Ralstonia pickettii 12D 8017861 YP_002980219.1 CDS Rpic12D_0239 NC_012856.1 251479 251610 D KEGG: rso:RSc0364 hypothetical protein; hypothetical protein 251479..251610 Ralstonia pickettii 12D 8017862 YP_002980220.1 CDS Rpic12D_0240 NC_012856.1 251660 252268 D involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein 251660..252268 Ralstonia pickettii 12D 8017863 YP_002980221.1 CDS Rpic12D_0241 NC_012856.1 252273 252485 D KEGG: rso:RSc0366 hypothetical protein; hypothetical protein 252273..252485 Ralstonia pickettii 12D 8017864 YP_002980222.1 CDS Rpic12D_0242 NC_012856.1 252574 253434 D PFAM: cytochrome C oxidase subunit III; KEGG: rso:RSc0367 cytochrome C oxidase subunit III transmembrane protein; cytochrome C oxidase subunit III 252574..253434 Ralstonia pickettii 12D 8017865 YP_002980223.1 CDS Rpic12D_0243 NC_012856.1 253561 253770 R KEGG: rso:RSc0368 hypothetical protein; hypothetical protein complement(253561..253770) Ralstonia pickettii 12D 8017866 YP_002980224.1 CDS Rpic12D_0244 NC_012856.1 253840 254610 D KEGG: rso:RSc0369 transmembrane cytochrome Oxidase complex biogenesis factor transmembrane protein; transmembrane cytochrome Oxidase complex biogenesis factor transmembrane protein 253840..254610 Ralstonia pickettii 12D 8017867 YP_002980225.1 CDS Rpic12D_0245 NC_012856.1 254663 255319 D KEGG: rso:RSc0370 hypothetical protein; hypothetical protein 254663..255319 Ralstonia pickettii 12D 8017868 YP_002980226.1 CDS Rpic12D_0246 NC_012856.1 255323 256414 D PFAM: cytochrome Oxidase assembly; KEGG: rso:RSc0371 heme O oxygenase (cytochrome aa3-controlling) transmembrane protein; cytochrome Oxidase assembly 255323..256414 Ralstonia pickettii 12D 8017869 YP_002980227.1 CDS Rpic12D_0247 NC_012856.1 256435 257376 D converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 256435..257376 Ralstonia pickettii 12D 8017870 YP_002980228.1 CDS Rpic12D_0248 NC_012856.1 257440 258051 D PFAM: electron transport protein SCO1/SenC; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: rso:RSc0373 lipoprotein; electron transport protein SCO1/SenC 257440..258051 Ralstonia pickettii 12D 8017871 YP_002980229.1 CDS Rpic12D_0249 NC_012856.1 258118 259047 R binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 complement(258118..259047) Ralstonia pickettii 12D 8017872 YP_002980230.1 CDS Rpic12D_0250 NC_012856.1 259246 262164 R KEGG: rso:RSc0375 hypothetical protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: GGDEF domain containing protein; PAS domain containing protein; PAS/PAC sensor containing diguanylate cyclase complement(259246..262164) Ralstonia pickettii 12D 8017873 YP_002980231.1 CDS Rpic12D_0251 NC_012856.1 262406 262810 D PFAM: OsmC family protein; KEGG: rso:RSc0376 hypothetical protein; OsmC family protein 262406..262810 Ralstonia pickettii 12D 8017874 YP_002980232.1 CDS Rpic12D_0252 NC_012856.1 262824 263693 D PFAM: pirin; KEGG: rso:RSc0377 pirin-like protein; Pirin domain-containing protein 262824..263693 Ralstonia pickettii 12D 8017875 YP_002980233.1 CDS Rpic12D_0253 NC_012856.1 263708 264718 R PFAM: glycosyl transferase, family 3-like; KEGG: rso:RSc0378 hypothetical protein; glycosyl transferase family protein complement(263708..264718) Ralstonia pickettii 12D 8017876 YP_002980234.1 CDS Rpic12D_0255 NC_012856.1 266161 267411 D PFAM: transposase mutator type; KEGG: rso:RSp0478 ISRSO7-transposase protein; transposase mutator type 266161..267411 Ralstonia pickettii 12D 8017878 YP_002980235.1 CDS Rpic12D_0256 NC_012856.1 268148 268951 R KEGG: rso:RSc0379 nitrate ATP-binding ABC transporter protein; TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter; SMART: AAA ATPase; nitrate ABC transporter ATPases C and D complement(268148..268951) Ralstonia pickettii 12D 8017879 YP_002980236.1 CDS Rpic12D_0257 NC_012856.1 268970 269821 R TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc0380 nitrate transmembrane ABC transporter protein; nitrate ABC transporter permease complement(268970..269821) Ralstonia pickettii 12D 8017880 YP_002980237.1 CDS Rpic12D_0258 NC_012856.1 269877 271157 R KEGG: rso:RSc0381 nitrate transporter protein; nitrate transporter protein complement(269877..271157) Ralstonia pickettii 12D 8017881 YP_002980238.1 CDS Rpic12D_0259 NC_012856.1 271645 272283 R PFAM: ANTAR domain protein; KEGG: rso:RSc0382 response regulator transcription regulator protein; response regulator receiver and ANTAR domain-containing protein complement(271645..272283) Ralstonia pickettii 12D 8017882 YP_002980239.1 CDS Rpic12D_0260 NC_012856.1 272431 273132 D PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rso:RSc0383 hypothetical protein; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase 272431..273132 Ralstonia pickettii 12D 8017883 YP_002980240.1 CDS Rpic12D_0261 NC_012856.1 273159 273803 D TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: rso:RSc0384 maleylacetoacetate isomerase (glutathione transferase zeta 1) protein; maleylacetoacetate isomerase 273159..273803 Ralstonia pickettii 12D 8017884 YP_002980241.1 CDS Rpic12D_0262 NC_012856.1 273880 274410 R KEGG: sml:Smlt0450 hypothetical protein; hypothetical protein complement(273880..274410) Ralstonia pickettii 12D 8017885 YP_002980242.1 CDS Rpic12D_0263 NC_012856.1 275007 275333 R hypothetical protein complement(275007..275333) Ralstonia pickettii 12D 8017886 YP_002980243.1 CDS Rpic12D_0264 NC_012856.1 276117 276659 R KEGG: reh:H16_A0021 hypothetical protein; hypothetical protein complement(276117..276659) Ralstonia pickettii 12D 8017887 YP_002980244.1 CDS Rpic12D_0265 NC_012856.1 276656 277279 R KEGG: reh:H16_A0022 hypothetical protein; hypothetical protein complement(276656..277279) Ralstonia pickettii 12D 8017888 YP_002980245.1 CDS Rpic12D_0266 NC_012856.1 277276 277887 R KEGG: reh:H16_A0023 hypothetical protein; hypothetical protein complement(277276..277887) Ralstonia pickettii 12D 8017889 YP_002980246.1 CDS Rpic12D_0267 NC_012856.1 277899 278261 R KEGG: reh:H16_B0505 hypothetical protein; hypothetical protein complement(277899..278261) Ralstonia pickettii 12D 8017890 YP_002980247.1 CDS Rpic12D_0268 NC_012856.1 278529 279725 R KEGG: rso:RSc0386 cell division protein; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle-docking protein FtsY complement(278529..279725) Ralstonia pickettii 12D 8017891 YP_002980248.1 CDS Rpic12D_0269 NC_012856.1 279798 281282 D PFAM: peptidase M16 domain protein; KEGG: rso:RSc0387 zinc protease protein; peptidase M16 domain-containing protein 279798..281282 Ralstonia pickettii 12D 8017892 YP_002980249.1 CDS Rpic12D_0270 NC_012856.1 281282 282634 D PFAM: peptidase M16 domain protein; KEGG: rso:RSc0388 zinc protease-like signal peptide protein; peptidase M16 domain-containing protein 281282..282634 Ralstonia pickettii 12D 8017893 YP_002980250.1 CDS Rpic12D_0271 NC_012856.1 282729 283385 D TIGRFAM: methyltransferase; PFAM: protein of unknown function methylase KEGG: rso:RSc0389 hypothetical protein; methyltransferase 282729..283385 Ralstonia pickettii 12D 8017894 YP_002980251.1 CDS coaD NC_012856.1 283583 284086 D Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 283583..284086 Ralstonia pickettii 12D 8017895 YP_002980252.1 CDS Rpic12D_0273 NC_012856.1 284138 284401 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rso:RSc0391 ferredoxin protein; 4Fe-4S ferredoxin 284138..284401 Ralstonia pickettii 12D 8017896 YP_002980253.1 CDS Rpic12D_0274 NC_012856.1 284471 285109 R KEGG: rso:RSc0392 prolin-rich transmembrane protein; prolin-rich transmembrane protein complement(284471..285109) Ralstonia pickettii 12D 8017897 YP_002980254.1 CDS Rpic12D_0275 NC_012856.1 285134 285736 R Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase complement(285134..285736) Ralstonia pickettii 12D 8017898 YP_002980255.1 CDS Rpic12D_0276 NC_012856.1 285907 286533 R the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc complement(285907..286533) Ralstonia pickettii 12D 8017899 YP_002980256.1 CDS Rpic12D_0277 NC_012856.1 286686 287636 R catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase complement(286686..287636) Ralstonia pickettii 12D 8017900 YP_002980257.1 CDS ipk NC_012856.1 287842 288711 R An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase complement(287842..288711) Ralstonia pickettii 12D 8017902 YP_002980258.1 CDS lolB NC_012856.1 288726 289349 R Incorporates lipoproteins in the outer membrane after they are released by the LolA protein; outer membrane lipoprotein LolB complement(288726..289349) Ralstonia pickettii 12D 8017903 YP_002980259.1 CDS Rpic12D_0280 NC_012856.1 289349 291286 R SMART: Tetratricopeptide domain protein; KEGG: rso:RSc0398 hypothetical protein; hypothetical protein complement(289349..291286) Ralstonia pickettii 12D 8017904 YP_002980260.1 CDS Rpic12D_0281 NC_012856.1 291388 292263 D Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 291388..292263 Ralstonia pickettii 12D 8017905 YP_002980261.1 CDS Rpic12D_0282 NC_012856.1 292549 294495 D KEGG: rso:RSc0400 hypothetical protein; hypothetical protein 292549..294495 Ralstonia pickettii 12D 8017906 YP_002980262.1 CDS Rpic12D_0283 NC_012856.1 294599 295747 D KEGG: rso:RSc0401 A/G-specific adenine glycosylase protein; TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; NUDIX hydrolase; SMART: HhH-GPD family protein; A/G-specific adenine glycosylase 294599..295747 Ralstonia pickettii 12D 8017907 YP_002980263.1 CDS Rpic12D_0284 NC_012856.1 295778 296431 R PFAM: peptidase S16 lon domain protein; SMART: peptidase S16 lon domain protein; KEGG: rso:RSc0402 hypothetical protein; peptidase S16 lon domain-containing protein complement(295778..296431) Ralstonia pickettii 12D 8017908 YP_002980264.1 CDS Rpic12D_0285 NC_012856.1 296534 297427 R PFAM: conserved hypothetical protein; KEGG: rso:RSc0403 hypothetical protein; hypothetical protein complement(296534..297427) Ralstonia pickettii 12D 8017909 YP_002980265.1 CDS Rpic12D_0286 NC_012856.1 297522 297851 R PFAM: PsiF repeat protein; KEGG: rso:RSc0404 signal peptide protein; PsiF repeat-containing protein complement(297522..297851) Ralstonia pickettii 12D 8017910 YP_002980266.1 CDS Rpic12D_0287 NC_012856.1 298034 299008 R catalyzes the phosphorylation of the phosphocarrier protein HPr of the bacterial phosphotransferase system; HPr kinase/phosphorylase complement(298034..299008) Ralstonia pickettii 12D 8017911 YP_002980267.1 CDS Rpic12D_0288 NC_012856.1 299082 299537 R TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: rso:RSc0406 nitrogen regulatory IIA (enzyme IIA-Ntr) (phosphotransferase enzyme II, A component) transcription regulator protein; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN complement(299082..299537) Ralstonia pickettii 12D 8017912 YP_002980268.1 CDS Rpic12D_0289 NC_012856.1 299884 300237 R TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: rso:RSc0407 sigma-54 modulation protein; sigma 54 modulation protein/ribosomal protein S30EA complement(299884..300237) Ralstonia pickettii 12D 8017913 YP_002980269.1 CDS Rpic12D_0290 NC_012856.1 300288 301799 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 complement(300288..301799) Ralstonia pickettii 12D 8017914 YP_002980270.1 CDS Rpic12D_0291 NC_012856.1 301896 302684 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RSc0409 ABC transporter ATP-binding protein; ABC transporter complement(301896..302684) Ralstonia pickettii 12D 8017915 YP_002980271.1 CDS Rpic12D_0292 NC_012856.1 302715 303302 R TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein; KEGG: rso:RSc0410 signal peptide protein; lipopolysaccharide transport periplasmic protein LptA complement(302715..303302) Ralstonia pickettii 12D 8017916 YP_002980272.1 CDS Rpic12D_0293 NC_012856.1 303362 303994 R PFAM: protein of unknown function DUF1239; KEGG: rso:RSc0411 hypothetical protein; hypothetical protein complement(303362..303994) Ralstonia pickettii 12D 8017917 YP_002980273.1 CDS Rpic12D_0294 NC_012856.1 303999 304583 R TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: rso:RSc0412 hypothetical protein; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase complement(303999..304583) Ralstonia pickettii 12D 8017918 YP_002980274.1 CDS Rpic12D_0295 NC_012856.1 304600 305583 R KEGG: rso:RSc0413 hypothetical protein; TIGRFAM: KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein; SMART: CBS domain containing protein; KpsF/GutQ family protein complement(304600..305583) Ralstonia pickettii 12D 8017919 YP_002980275.1 CDS Rpic12D_0296 NC_012856.1 305893 307872 D PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; TrkA-C domain protein; KEGG: rso:RSc0414 glutathione-regulated potassium-efflux system K+/H+ antiporter transmembrane protein; sodium/hydrogen exchanger 305893..307872 Ralstonia pickettii 12D 8017920 YP_002980276.1 CDS Rpic12D_0297 NC_012856.1 307882 308286 R KEGG: rso:RSc0415 hypothetical protein; hypothetical protein complement(307882..308286) Ralstonia pickettii 12D 8017921 YP_002980277.1 CDS Rpic12D_0298 NC_012856.1 308327 308905 R TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: rso:RSc0416 hypothetical protein; PfpI family intracellular protease complement(308327..308905) Ralstonia pickettii 12D 8017922 YP_002980278.1 CDS Rpic12D_0299 NC_012856.1 309014 309622 D catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 309014..309622 Ralstonia pickettii 12D 8017923 YP_002980279.1 CDS Rpic12D_0300 NC_012856.1 309747 310367 D PFAM: lysine exporter protein (LYSE/YGGA); KEGG: rso:RSc0418 transport transmembrane protein; Lysine exporter protein LysE/YggA 309747..310367 Ralstonia pickettii 12D 8017924 YP_002980280.1 CDS Rpic12D_0301 NC_012856.1 310398 310883 R PFAM: protein of unknown function DUF355; KEGG: rso:RSc0419 hypothetical protein; hypothetical protein complement(310398..310883) Ralstonia pickettii 12D 8017925 YP_002980281.1 CDS Rpic12D_0302 NC_012856.1 310964 313828 R TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter; KEGG: rso:RSc0420 excinuclease ABC subunit A; excinuclease ABC subunit A complement(310964..313828) Ralstonia pickettii 12D 8017926 YP_002980282.1 CDS Rpic12D_0303 NC_012856.1 314050 315234 D PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc0421 multidrug-efflux transporter transmembrane protein; major facilitator superfamily protein 314050..315234 Ralstonia pickettii 12D 8017927 YP_002980283.1 CDS Rpic12D_0304 NC_012856.1 315282 315839 D binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 315282..315839 Ralstonia pickettii 12D 8017928 YP_002980284.1 CDS Rpic12D_0306 NC_012856.1 316530 318026 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pol:Bpro_0544 periplasmic sensor signal transduction histidine kinase; histidine kinase complement(316530..318026) Ralstonia pickettii 12D 8017930 YP_002980285.1 CDS Rpic12D_0307 NC_012856.1 318023 318751 R PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: pol:Bpro_0543 two component transcriptional regulator, winged helix family; winged helix family two component transcriptional regulator complement(318023..318751) Ralstonia pickettii 12D 8017931 YP_002980286.1 CDS Rpic12D_0308 NC_012856.1 318884 319558 D KEGG: dac:Daci_3135 thiosulfate reductase cytochrome b subunit (membrane anchoring protein); thiosulfate reductase cytochrome subunit B 318884..319558 Ralstonia pickettii 12D 8017932 YP_002980287.1 CDS Rpic12D_0309 NC_012856.1 319567 320358 D PFAM: oxidoreductase molybdopterin binding; KEGG: dac:Daci_3134 oxidoreductase molybdopterin binding; oxidoreductase molybdopterin binding 319567..320358 Ralstonia pickettii 12D 8017933 YP_002980288.1 CDS Rpic12D_0310 NC_012856.1 320479 320808 D TIGRFAM: pentapeptide MXKDX repeat protein; KEGG: dac:Daci_3133 pentapeptide MXKDX repeat-containing protein; pentapeptide MXKDX repeat-containing protein 320479..320808 Ralstonia pickettii 12D 8017934 YP_002980289.1 CDS Rpic12D_0311 NC_012856.1 320854 322254 D PFAM: cytochrome C biogenesis protein transmembrane region; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pol:Bpro_0539 cytochrome C biogenesis protein, transmembrane region; cytochrome C biogenesis protein transmembrane region 320854..322254 Ralstonia pickettii 12D 8017935 YP_002980290.1 CDS Rpic12D_0312 NC_012856.1 322508 322768 R KEGG: rso:RSc0424 signal peptide protein; signal peptide protein complement(322508..322768) Ralstonia pickettii 12D 8017936 YP_002980291.1 CDS Rpic12D_0313 NC_012856.1 322793 323254 R KEGG: rso:RSc0425 hypothetical protein; hypothetical protein complement(322793..323254) Ralstonia pickettii 12D 8017937 YP_002980292.1 CDS Rpic12D_0314 NC_012856.1 323251 324054 R KEGG: bur:Bcep18194_A6097 hypothetical protein; hypothetical protein complement(323251..324054) Ralstonia pickettii 12D 8017938 YP_002980293.1 CDS Rpic12D_0315 NC_012856.1 324051 325268 R FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase complement(324051..325268) Ralstonia pickettii 12D 8017939 YP_002980294.1 CDS Rpic12D_0316 NC_012856.1 325342 326205 R PFAM: polysaccharide deacetylase; KEGG: bac:BamMC406_2684 polysaccharide deacetylase; polysaccharide deacetylase complement(325342..326205) Ralstonia pickettii 12D 8017940 YP_002980295.1 CDS Rpic12D_0317 NC_012856.1 326202 328622 R PFAM: MMPL domain protein; KEGG: bch:Bcen2424_2764 exporter-like protein; MMPL domain-containing protein complement(326202..328622) Ralstonia pickettii 12D 8017941 YP_002980296.1 CDS Rpic12D_0318 NC_012856.1 328636 329232 R KEGG: bac:BamMC406_2682 hypothetical protein; hypothetical protein complement(328636..329232) Ralstonia pickettii 12D 8017942 YP_002980297.1 CDS Rpic12D_0319 NC_012856.1 329229 330191 R PFAM: lipid A biosynthesis acyltransferase; KEGG: rso:RSc0431 hypothetical protein; lipid A biosynthesis acyltransferase complement(329229..330191) Ralstonia pickettii 12D 8017943 YP_002980298.1 CDS Rpic12D_0320 NC_012856.1 330188 331885 R PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: rso:RSc0432 hypothetical protein; 3-hydroxyacyl-ACP dehydratase complement(330188..331885) Ralstonia pickettii 12D 8017944 YP_002980299.1 CDS Rpic12D_0321 NC_012856.1 331911 332585 R KEGG: rso:RSc0433 hypothetical protein; hypothetical protein complement(331911..332585) Ralstonia pickettii 12D 8017945 YP_002980300.1 CDS Rpic12D_0322 NC_012856.1 332998 333258 D Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides; acyl carrier protein 332998..333258 Ralstonia pickettii 12D 8017946 YP_002980301.1 CDS Rpic12D_0323 NC_012856.1 333313 334083 D PFAM: glycosyl transferase family 2; KEGG: rso:RSc0436 hypothetical protein; family 2 glycosyl transferase 333313..334083 Ralstonia pickettii 12D 8017947 YP_002980302.1 CDS Rpic12D_0324 NC_012856.1 334100 334678 R PFAM: regulatory protein TetR; KEGG: bur:Bcep18194_C6808 TetR family transcriptional regulator; TetR family transcriptional regulator complement(334100..334678) Ralstonia pickettii 12D 8017948 YP_002980303.1 CDS Rpic12D_0325 NC_012856.1 335004 335585 D PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; KEGG: bam:Bamb_5148 Sel1 domain-containing protein; Sel1 domain-containing protein repeat-containing protein 335004..335585 Ralstonia pickettii 12D 8017949 YP_002980304.1 CDS Rpic12D_0326 NC_012856.1 335737 336570 D KEGG: bcj:BCAS0626 lipoprotein; lipoprotein 335737..336570 Ralstonia pickettii 12D 8017950 YP_002980305.1 CDS Rpic12D_0327 NC_012856.1 336655 337464 R PFAM: cytochrome C class I; KEGG: rme:Rmet_5347 cytochrome C, class I; class I cytochrome c complement(336655..337464) Ralstonia pickettii 12D 8017951 YP_002980306.1 CDS Rpic12D_0328 NC_012856.1 337515 337928 R PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: rso:RSc0437 hypothetical protein; hypothetical protein complement(337515..337928) Ralstonia pickettii 12D 8017952 YP_002980307.1 CDS Rpic12D_0329 NC_012856.1 337930 338364 R PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: rso:RSc0438 hypothetical protein; hypothetical protein complement(337930..338364) Ralstonia pickettii 12D 8017953 YP_002980308.1 CDS Rpic12D_0330 NC_012856.1 338697 339668 D PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: rso:RSc0439 lipase/esterase protein; alpha/beta hydrolase 338697..339668 Ralstonia pickettii 12D 8017954 YP_002980309.1 CDS Rpic12D_0331 NC_012856.1 339727 340521 D KEGG: rso:RSc0440 signal peptide protein; signal peptide protein 339727..340521 Ralstonia pickettii 12D 8017955 YP_002980310.1 CDS Rpic12D_0332 NC_012856.1 340541 341050 R KEGG: rso:RSc0441 thermoresistant gluconokinase (gluconate kinase 2) protein; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; thermoresistant glucokinase family carbohydrate kinase complement(340541..341050) Ralstonia pickettii 12D 8017956 YP_002980311.1 CDS Rpic12D_0333 NC_012856.1 341283 342998 D PFAM: AMP-dependent synthetase and ligase; KEGG: rso:RSc0442 acyl-CoA synthetase; AMP-binding domain-containing protein 341283..342998 Ralstonia pickettii 12D 8017957 YP_002980312.1 CDS Rpic12D_0334 NC_012856.1 343700 344974 D KEGG: rso:RSc0443 glycin-rich signal peptide protein; glycine-rich signal peptide protein 343700..344974 Ralstonia pickettii 12D 8017958 YP_002980313.1 CDS Rpic12D_0335 NC_012856.1 345099 345533 D KEGG: rso:RSc0444 signal peptide protein; signal peptide protein 345099..345533 Ralstonia pickettii 12D 8017959 YP_002980314.1 CDS Rpic12D_0336 NC_012856.1 345550 346233 D PFAM: peptidase C39 bacteriocin processing; KEGG: rso:RSc0445 signal peptide protein; peptidase C39 bacteriocin processing 345550..346233 Ralstonia pickettii 12D 8017960 YP_002980315.1 CDS Rpic12D_0337 NC_012856.1 346279 346815 D KEGG: rso:RSc0446 lipoprotein; lipoprotein 346279..346815 Ralstonia pickettii 12D 8017961 YP_002980316.1 CDS Rpic12D_0338 NC_012856.1 346817 348127 R KEGG: rso:RSc0447 hypothetical protein; hypothetical protein complement(346817..348127) Ralstonia pickettii 12D 8017962 YP_002980317.1 CDS queF NC_012856.1 348351 349187 R catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase complement(348351..349187) Ralstonia pickettii 12D 8017963 YP_002980318.1 CDS Rpic12D_0340 NC_012856.1 349187 350707 R threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase complement(349187..350707) Ralstonia pickettii 12D 8017964 YP_002980319.1 CDS Rpic12D_0341 NC_012856.1 350851 351768 D PFAM: K channel inward rectifier conserved region 2 domain protein; Ion transport 2 domain protein; KEGG: rso:RSc0450 ATP-sensitive inward rectifier potassium channel related transmembrane protein; K channel inward rectifier domain-containing protein 350851..351768 Ralstonia pickettii 12D 8017965 YP_002980320.1 CDS Rpic12D_0342 NC_012856.1 351800 353047 D PFAM: nucleoside recognition domain protein; KEGG: rso:RSc0452 transmembrane protein; nucleoside recognition domain-containing protein 351800..353047 Ralstonia pickettii 12D 8017966 YP_002980321.1 CDS Rpic12D_0343 NC_012856.1 353105 353686 D KEGG: rso:RSc0453 hypothetical protein; hypothetical protein 353105..353686 Ralstonia pickettii 12D 8017967 YP_002980322.1 CDS Rpic12D_0344 NC_012856.1 353888 357925 D PFAM: FAD linked oxidase domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: rso:RSc0454 oxidoreductase protein; FAD linked oxidase domain-containing protein 353888..357925 Ralstonia pickettii 12D 8017968 YP_002980323.1 CDS Rpic12D_0345 NC_012856.1 357922 358374 D PFAM: histidine triad (HIT) protein; KEGG: rso:RSc0455 hypothetical protein; histidine triad (HIT) protein 357922..358374 Ralstonia pickettii 12D 8017969 YP_002980324.1 CDS Rpic12D_0346 NC_012856.1 358489 360333 D PFAM: ABC transporter; ABC transporter; SbmABacA family protein; SMART: AAA ATPase; KEGG: rso:RSc0456 ATP-binding transport ABC transporter protein; ABC transporter 358489..360333 Ralstonia pickettii 12D 8017970 YP_002980325.1 CDS Rpic12D_0347 NC_012856.1 360365 360781 D PFAM: protein of unknown function DUF971; KEGG: rso:RSc0457 hypothetical protein; hypothetical protein 360365..360781 Ralstonia pickettii 12D 8017971 YP_002980326.1 CDS ubiE NC_012856.1 360834 361565 D Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 360834..361565 Ralstonia pickettii 12D 8017972 YP_002980327.1 CDS Rpic12D_0349 NC_012856.1 361720 362739 D PFAM: import inner membrane translocase subunit Tim44; KEGG: rso:RSc0459 hypothetical protein; import inner membrane translocase subunit Tim44 361720..362739 Ralstonia pickettii 12D 8017973 YP_002980328.1 CDS Rpic12D_0350 NC_012856.1 362885 363547 D PFAM: Sterol-binding domain protein; KEGG: rso:RSc0460 hypothetical protein; Sterol-binding domain-containing protein 362885..363547 Ralstonia pickettii 12D 8017974 YP_002980329.1 CDS ubiB NC_012856.1 363544 365121 D an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions; ubiquinone biosynthesis protein UbiB 363544..365121 Ralstonia pickettii 12D 8017975 YP_002980330.1 CDS Rpic12D_0352 NC_012856.1 365145 365774 D PFAM: thiopurine S-methyltransferase; Methyltransferase type 12; KEGG: rso:RSc0462 hypothetical protein; thiopurine S-methyltransferase 365145..365774 Ralstonia pickettii 12D 8017976 YP_002980331.1 CDS Rpic12D_0353 NC_012856.1 366006 367445 D PFAM: Na+/solute symporter; KEGG: rso:RSc0463 sodium/solute symporter transmembrane protein; Na+/solute symporter 366006..367445 Ralstonia pickettii 12D 8017977 YP_002980332.1 CDS Rpic12D_0354 NC_012856.1 367696 368037 D TIGRFAM: regulatory protein, FmdB family; KEGG: rso:RSc0464 hypothetical protein; FmdB family regulatory protein 367696..368037 Ralstonia pickettii 12D 8017978 YP_002980333.1 CDS Rpic12D_0355 NC_012856.1 368068 368805 D PFAM: protein of unknown function DUF502; KEGG: rso:RSc0465 hypothetical protein; hypothetical protein 368068..368805 Ralstonia pickettii 12D 8017979 YP_002980334.1 CDS aspS NC_012856.1 368860 370731 D catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 368860..370731 Ralstonia pickettii 12D 8017980 YP_002980335.1 CDS Rpic12D_0357 NC_012856.1 370879 371739 D KEGG: rso:RSc0467 hypothetical protein; hypothetical protein 370879..371739 Ralstonia pickettii 12D 8017981 YP_002980336.1 CDS ntpA NC_012856.1 371847 372332 D converts dATP to dAMP and pyrophosphate; dATP pyrophosphohydrolase 371847..372332 Ralstonia pickettii 12D 8017982 YP_002980337.1 CDS Rpic12D_0359 NC_012856.1 372334 373080 D PFAM: endonuclease/exonuclease/phosphatase; KEGG: rso:RSc0469 hypothetical protein; endonuclease/exonuclease/phosphatase 372334..373080 Ralstonia pickettii 12D 8017983 YP_002980338.1 CDS Rpic12D_0360 NC_012856.1 373077 374345 D PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; KEGG: rso:RSc0470 hypothetical protein; phospholipase D/transphosphatidylase 373077..374345 Ralstonia pickettii 12D 8017984 YP_002980339.1 CDS Rpic12D_0361 NC_012856.1 374385 376049 D PFAM: coenzyme A transferase; KEGG: rso:RSc0471 transferase protein; coenzyme A transferase 374385..376049 Ralstonia pickettii 12D 8017985 YP_002980340.1 CDS Rpic12D_0362 NC_012856.1 376403 377044 D PFAM: regulatory protein TetR; KEGG: rso:RSc0472 transcription regulator protein; TetR family transcriptional regulator 376403..377044 Ralstonia pickettii 12D 8017986 YP_002980341.1 CDS Rpic12D_0363 NC_012856.1 377096 378883 D PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rso:RSc0473 acyl-CoA dehydrogenase oxidoreductase protein; acyl-CoA dehydrogenase domain-containing protein 377096..378883 Ralstonia pickettii 12D 8017987 YP_002980342.1 CDS Rpic12D_0364 NC_012856.1 378959 381439 D PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: rso:RSc0474 3-hydroxyacyl-CoA dehydrogenase oxidoreductase protein; NAD-binding 3-hydroxyacyl-CoA dehydrogenase 378959..381439 Ralstonia pickettii 12D 8017988 YP_002980343.1 CDS Rpic12D_0365 NC_012856.1 381473 382672 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 381473..382672 Ralstonia pickettii 12D 8017989 YP_002980344.1 CDS Rpic12D_0366 NC_012856.1 382891 383856 D TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: reu:Reut_A0449 hypothetical protein; degV family protein 382891..383856 Ralstonia pickettii 12D 8017990 YP_002980345.1 CDS Rpic12D_0367 NC_012856.1 383883 384647 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 383883..384647 Ralstonia pickettii 12D 8017991 YP_002980346.1 CDS Rpic12D_0368 NC_012856.1 384711 385148 R PFAM: thioesterase superfamily protein; KEGG: rso:RSc0477 hypothetical protein; thioesterase superfamily protein complement(384711..385148) Ralstonia pickettii 12D 8017992 YP_002980347.1 CDS Rpic12D_0369 NC_012856.1 385239 387077 D PFAM: ABC transporter; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: rso:RSc0478 ABC transporter ATP-binding protein; ABC transporter 385239..387077 Ralstonia pickettii 12D 8017993 YP_002980348.1 CDS Rpic12D_0370 NC_012856.1 387094 388038 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc0479 transcription regulator protein; LysR family transcriptional regulator 387094..388038 Ralstonia pickettii 12D 8017994 YP_002980349.1 CDS Rpic12D_0371 NC_012856.1 388190 389491 D PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: rso:RSc0480 glutamate dehydrogenase (NAD(P)+) oxidoreductase protein; Glu/Leu/Phe/Val dehydrogenase 388190..389491 Ralstonia pickettii 12D 8017995 YP_002980350.1 CDS Rpic12D_0372 NC_012856.1 390014 390922 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: rso:RSc0481 amino-acid-binding periplasmic (PBP) ABC transporter protein; family 3 extracellular solute-binding protein 390014..390922 Ralstonia pickettii 12D 8017996 YP_002980351.1 CDS Rpic12D_0373 NC_012856.1 391022 391750 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc0482 glutamate/aspartate transmembrane ABC transporter protein; polar amino acid ABC transporter permease 391022..391750 Ralstonia pickettii 12D 8017997 YP_002980352.1 CDS Rpic12D_0374 NC_012856.1 391768 392451 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc0483 glutamate/aspartate transmembrane ABC transporter protein; polar amino acid ABC transporter permease 391768..392451 Ralstonia pickettii 12D 8017998 YP_002980353.1 CDS Rpic12D_0375 NC_012856.1 392448 393182 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RSc0484 glutamate/aspartate transport ATP-binding ABC transporter protein; ABC transporter 392448..393182 Ralstonia pickettii 12D 8017999 YP_002980354.1 CDS Rpic12D_0376 NC_012856.1 393372 394202 R PFAM: glutamine amidotransferase class-II; KEGG: rso:RSc0485 hypothetical protein; glutamine amidotransferase complement(393372..394202) Ralstonia pickettii 12D 8018000 YP_002980355.1 CDS Rpic12D_0377 NC_012856.1 394359 395657 D PFAM: MOFRL domain protein; KEGG: rso:RSc0486 hydroxypyruvate reductase oxidoreductase protein; hydroxypyruvate reductase 394359..395657 Ralstonia pickettii 12D 8018001 YP_002980356.1 CDS Rpic12D_0378 NC_012856.1 395691 396725 D catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 395691..396725 Ralstonia pickettii 12D 8018002 YP_002980357.1 CDS Rpic12D_0379 NC_012856.1 396733 397530 D KEGG: rso:RSc0488 transmembrane protein; hypothetical protein 396733..397530 Ralstonia pickettii 12D 8018003 YP_002980358.1 CDS Rpic12D_0380 NC_012856.1 397887 398333 R PFAM: OsmC family protein; KEGG: rso:RSc0489 hypothetical protein; OsmC family protein complement(397887..398333) Ralstonia pickettii 12D 8018005 YP_002980359.1 CDS rplM NC_012856.1 399034 399462 D in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 399034..399462 Ralstonia pickettii 12D 8018006 YP_002980360.1 CDS rpsI NC_012856.1 399475 399867 D forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 399475..399867 Ralstonia pickettii 12D 8018007 YP_002980361.1 CDS Rpic12D_0383 NC_012856.1 400098 400853 D KEGG: rso:RSc0492 hypothetical protein; hypothetical protein 400098..400853 Ralstonia pickettii 12D 8018008 YP_002980362.1 CDS Rpic12D_0384 NC_012856.1 400897 401301 D PFAM: protein of unknown function DUF583; KEGG: rso:RSc0493 hypothetical protein; hypothetical protein 400897..401301 Ralstonia pickettii 12D 8018009 YP_002980363.1 CDS Rpic12D_0385 NC_012856.1 401428 401802 D essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors; iron-sulfur cluster insertion protein ErpA 401428..401802 Ralstonia pickettii 12D 8018010 YP_002980364.1 CDS anmK NC_012856.1 401868 403022 R catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase complement(401868..403022) Ralstonia pickettii 12D 8018011 YP_002980365.1 CDS Rpic12D_0387 NC_012856.1 403198 404463 D catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 403198..404463 Ralstonia pickettii 12D 8018012 YP_002980366.1 CDS Rpic12D_0388 NC_012856.1 404460 404972 D hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 404460..404972 Ralstonia pickettii 12D 8018013 YP_002980367.1 CDS Rpic12D_0389 NC_012856.1 404992 405672 D PFAM: phosphoglycerate mutase; KEGG: rso:RSc0499 phosphoglycerate mutase 2 protein; phosphoglycerate mutase 404992..405672 Ralstonia pickettii 12D 8018014 YP_002980368.1 CDS Rpic12D_0390 NC_012856.1 405669 406385 R TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF165; KEGG: cti:RALTA_A0450 membrane lipoprotein, DUF165; hypothetical protein complement(405669..406385) Ralstonia pickettii 12D 8018015 YP_002980369.1 CDS ruvB NC_012856.1 406403 407476 R promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB complement(406403..407476) Ralstonia pickettii 12D 8018016 YP_002980370.1 CDS ruvA NC_012856.1 407541 408122 R plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA complement(407541..408122) Ralstonia pickettii 12D 8018017 YP_002980371.1 CDS Rpic12D_0393 NC_012856.1 408223 409362 R PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: rso:RSc0502 glycerophosphoryl diester phosphodiesterase, periplasmic precursor protein; glycerophosphoryl diester phosphodiesterase complement(408223..409362) Ralstonia pickettii 12D 8018018 YP_002980372.1 CDS ruvC NC_012856.1 409442 409987 R endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase complement(409442..409987) Ralstonia pickettii 12D 8018019 YP_002980373.1 CDS purH NC_012856.1 410071 411645 R involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(410071..411645) Ralstonia pickettii 12D 8018020 YP_002980374.1 CDS Rpic12D_0396 NC_012856.1 411742 411975 R PFAM: helix-turn-helix Fis-type; KEGG: rso:RSc0505 DNA-binding protein fis; DNA-binding protein Fis complement(411742..411975) Ralstonia pickettii 12D 8018021 YP_002980375.1 CDS Rpic12D_0397 NC_012856.1 411972 413039 R TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; KEGG: rso:RSc0506 NifR3-like protein; nifR3 family TIM-barrel protein complement(411972..413039) Ralstonia pickettii 12D 8018022 YP_002980376.1 CDS Rpic12D_0398 NC_012856.1 413235 414518 R PFAM: FAD dependent oxidoreductase; KEGG: rso:RSc0507 amino acid dehydrogenase transmembrane protein; FAD dependent oxidoreductase complement(413235..414518) Ralstonia pickettii 12D 8018023 YP_002980377.1 CDS Rpic12D_0399 NC_012856.1 414522 415757 R TIGRFAM: 2-polyprenyl-6-methoxyphenol 4-hydroxylase; Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; KEGG: rso:RSc0508 hypothetical protein; hypothetical protein complement(414522..415757) Ralstonia pickettii 12D 8018024 YP_002980378.1 CDS Rpic12D_0400 NC_012856.1 415754 417142 R PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: rso:RSc0509 Xaa-Pro aminopeptidase; peptidase M24 complement(415754..417142) Ralstonia pickettii 12D 8018025 YP_002980379.1 CDS Rpic12D_0401 NC_012856.1 417368 419431 D KEGG: rso:RSc0510 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; MHYT domain protein; SMART: EAL domain protein; GGDEF domain containing protein; MHYT sensor-containing diguanylate cyclase/phosphodiesterase 417368..419431 Ralstonia pickettii 12D 8018026 YP_002980380.1 CDS Rpic12D_0402 NC_012856.1 419436 420140 R PFAM: Nucleotidyl transferase; KEGG: rso:RSc0511 mannose-1-phosphate guanyltransferase-related protein; nucleotidyl transferase complement(419436..420140) Ralstonia pickettii 12D 8018027 YP_002980381.1 CDS Rpic12D_0403 NC_012856.1 420146 420472 R PFAM: branched-chain amino acid transport; KEGG: rso:RSc0512 hypothetical protein; branched-chain amino acid transport complement(420146..420472) Ralstonia pickettii 12D 8018028 YP_002980382.1 CDS Rpic12D_0404 NC_012856.1 420469 421197 R PFAM: AzlC family protein; KEGG: rso:RSc0513 hypothetical protein; AzlC family protein complement(420469..421197) Ralstonia pickettii 12D 8018029 YP_002980383.1 CDS Rpic12D_0405 NC_012856.1 421197 422270 R PFAM: aminoglycoside phosphotransferase; KEGG: rso:RSc0514 hypothetical protein; aminoglycoside phosphotransferase complement(421197..422270) Ralstonia pickettii 12D 8018030 YP_002980384.1 CDS Rpic12D_0406 NC_012856.1 422447 424888 D PFAM: organic solvent tolerance protein; OstA family protein; KEGG: rso:RSc0515 organic solvent tolerance transmembrane protein; organic solvent tolerance protein 422447..424888 Ralstonia pickettii 12D 8018031 YP_002980385.1 CDS Rpic12D_0407 NC_012856.1 424881 426383 D PFAM: SurA domain; PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: rso:RSc0516 peptidyl-prolyl cis-trans isomerase; SurA domain-containing protein 424881..426383 Ralstonia pickettii 12D 8018032 YP_002980386.1 CDS pdxA NC_012856.1 426472 427488 D catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 426472..427488 Ralstonia pickettii 12D 8018033 YP_002980387.1 CDS ksgA NC_012856.1 427520 428365 D catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 427520..428365 Ralstonia pickettii 12D 8018034 YP_002980388.1 CDS Rpic12D_0410 NC_012856.1 428352 429257 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RSc0519 hypothetical protein; hypothetical protein complement(428352..429257) Ralstonia pickettii 12D 8018035 YP_002980389.1 CDS Rpic12D_0411 NC_012856.1 429241 429648 R KEGG: rso:RSc0520 lactoylglutathione lyase; TIGRFAM: lactoylglutathione lyase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; lactoylglutathione lyase complement(429241..429648) Ralstonia pickettii 12D 8018036 YP_002980390.1 CDS Rpic12D_0412 NC_012856.1 429768 430646 R PFAM: protein of unknown function DUF45; KEGG: rso:RSc0521 hypothetical protein; hypothetical protein complement(429768..430646) Ralstonia pickettii 12D 8018037 YP_002980391.1 CDS Rpic12D_0413 NC_012856.1 430643 431395 R PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: rso:RSc0522 acyltransferase transmembrane protein; phospholipid/glycerol acyltransferase complement(430643..431395) Ralstonia pickettii 12D 8018038 YP_002980392.1 CDS Rpic12D_0414 NC_012856.1 431407 431985 R Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate; D,D-heptose 1,7-bisphosphate phosphatase complement(431407..431985) Ralstonia pickettii 12D 8018039 YP_002980393.1 CDS glyS NC_012856.1 432017 434110 R glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta complement(432017..434110) Ralstonia pickettii 12D 8018040 YP_002980394.1 CDS Rpic12D_0416 NC_012856.1 434197 434856 R KEGG: rso:RSc0525 signal peptide protein; signal peptide protein complement(434197..434856) Ralstonia pickettii 12D 8018041 YP_002980395.1 CDS glyQ NC_012856.1 434853 435839 R glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha complement(434853..435839) Ralstonia pickettii 12D 8018042 YP_002980396.1 CDS lnt NC_012856.1 436009 437520 R Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase complement(436009..437520) Ralstonia pickettii 12D 8018043 YP_002980397.1 CDS Rpic12D_0419 NC_012856.1 437585 438514 R PFAM: CBS domain containing protein; transporter-associated region; KEGG: rso:RSc0528 hypothetical protein; hypothetical protein complement(437585..438514) Ralstonia pickettii 12D 8018044 YP_002980398.1 CDS Rpic12D_0420 NC_012856.1 438683 439504 D KEGG: hypothetical protein LOC769970; hypothetical protein 438683..439504 Ralstonia pickettii 12D 8018045 YP_002980399.1 CDS Rpic12D_0421 NC_012856.1 440485 441297 R contains unknown N-terminal domain/ metalloprotease C-terminal domain; unkown domain/ metalloprotease fusion protein complement(440485..441297) Ralstonia pickettii 12D 8018046 YP_002980400.1 CDS Rpic12D_0422 NC_012856.1 441310 442302 R PFAM: PhoH family protein; KEGG: rme:Rmet_0452 PhoH-like protein; PhoH family protein complement(441310..442302) Ralstonia pickettii 12D 8018047 YP_002980401.1 CDS Rpic12D_0423 NC_012856.1 442324 443694 R catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase complement(442324..443694) Ralstonia pickettii 12D 8018048 YP_002980402.1 CDS Rpic12D_0424 NC_012856.1 443747 444160 R KEGG: rso:RSc0532 hypothetical protein; hypothetical protein complement(443747..444160) Ralstonia pickettii 12D 8018049 YP_002980403.1 CDS Rpic12D_0425 NC_012856.1 444251 445318 R KEGG: rso:RSc0533 transmembrane protein; hypothetical protein complement(444251..445318) Ralstonia pickettii 12D 8018050 YP_002980404.1 CDS Rpic12D_0426 NC_012856.1 445389 446309 R PFAM: OmpW family protein; KEGG: bpd:BURPS668_3797 OmpW family protein; OmpW family protein complement(445389..446309) Ralstonia pickettii 12D 8018051 YP_002980405.1 CDS Rpic12D_0427 NC_012856.1 446521 447438 R KEGG: rso:RSc0534 lipoprotein transmembrane; lipoprotein transmembrane complement(446521..447438) Ralstonia pickettii 12D 8018052 YP_002980406.1 CDS Rpic12D_0428 NC_012856.1 447459 449198 R PFAM: AMP-dependent synthetase and ligase; KEGG: bph:Bphy_1704 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase complement(447459..449198) Ralstonia pickettii 12D 8018053 YP_002980407.1 CDS Rpic12D_0429 NC_012856.1 449299 450618 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(449299..450618) Ralstonia pickettii 12D 8018054 YP_002980408.1 CDS Rpic12D_0430 NC_012856.1 450623 451543 R PFAM: MaoC domain protein dehydratase; KEGG: pfl:PFL_2941 MaoC-like domain-containing protein; MaoC domain-containing protein dehydratase complement(450623..451543) Ralstonia pickettii 12D 8018055 YP_002980409.1 CDS fabG NC_012856.1 451550 452962 R Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase complement(451550..452962) Ralstonia pickettii 12D 8018056 YP_002980410.1 CDS Rpic12D_0432 NC_012856.1 452995 455505 R functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase complement(452995..455505) Ralstonia pickettii 12D 8018057 YP_002980411.1 CDS Rpic12D_0433 NC_012856.1 455623 456687 R PFAM: regulatory protein TetR; KEGG: rso:RSc0538 transcription regulator protein; TetR family transcriptional regulator complement(455623..456687) Ralstonia pickettii 12D 8018058 YP_002980412.1 CDS Rpic12D_0434 NC_012856.1 457335 459032 D PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicases ; helicase domain protein; KEGG: rso:RSc0539 ATP-dependent RNA helicase protein; DEAD/DEAH box helicase 457335..459032 Ralstonia pickettii 12D 8018059 YP_002980413.1 CDS Rpic12D_0435 NC_012856.1 459038 460090 D catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages; serine/threonine protein kinase 459038..460090 Ralstonia pickettii 12D 8018060 YP_002980414.1 CDS Rpic12D_0436 NC_012856.1 460124 461020 R PFAM: pirin; KEGG: rso:RSc0541 pirin-like protein; Pirin domain-containing protein complement(460124..461020) Ralstonia pickettii 12D 8018061 YP_002980415.1 CDS Rpic12D_0437 NC_012856.1 461170 462087 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RSc0542 transcription regulator protein; LysR family transcriptional regulator 461170..462087 Ralstonia pickettii 12D 8018062 YP_002980416.1 CDS Rpic12D_0438 NC_012856.1 462543 463283 D PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: rso:RSc0543 response regulator transcription regulator protein; winged helix family two component transcriptional regulator 462543..463283 Ralstonia pickettii 12D 8018063 YP_002980417.1 CDS Rpic12D_0439 NC_012856.1 463362 463694 D PFAM: cupin; KEGG: spe:Spro_2546 cupin 2 domain-containing protein; cupin 463362..463694 Ralstonia pickettii 12D 8018064 YP_002980418.1 CDS Rpic12D_0440 NC_012856.1 463740 464900 R PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: rso:RSc0545 oxidoreductase protein; monooxygenase FAD-binding complement(463740..464900) Ralstonia pickettii 12D 8018065 YP_002980419.1 CDS Rpic12D_0441 NC_012856.1 465022 465945 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bcj:BCAS0107 LysR family regulatory protein; LysR family transcriptional regulator 465022..465945 Ralstonia pickettii 12D 8018066 YP_002980420.1 CDS Rpic12D_0442 NC_012856.1 466085 467419 D PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: bur:Bcep18194_C7600 major facilitator transporter; major facilitator superfamily protein 466085..467419 Ralstonia pickettii 12D 8018067 YP_002980421.1 CDS Rpic12D_0443 NC_012856.1 467451 468437 D PFAM: succinylglutamate desuccinylase/aspartoacylase; KEGG: bur:Bcep18194_C7599 succinylglutamate desuccinylase/aspartoacylase; succinylglutamate desuccinylase/aspartoacylase 467451..468437 Ralstonia pickettii 12D 8018068 YP_002980422.1 CDS Rpic12D_0444 NC_012856.1 468434 469102 R PFAM: regulatory protein TetR; KEGG: bte:BTH_II0405 TetR family transcriptional regulator; TetR family transcriptional regulator complement(468434..469102) Ralstonia pickettii 12D 8018069 YP_002980423.1 CDS Rpic12D_0445 NC_012856.1 469211 470761 D PFAM: FAD dependent oxidoreductase; KEGG: bpd:BURPS668_A2821 arylesterase/monoxygenase; FAD dependent oxidoreductase 469211..470761 Ralstonia pickettii 12D 8018070 YP_002980424.1 CDS Rpic12D_0446 NC_012856.1 470785 471741 D PFAM: alpha/beta hydrolase fold; KEGG: bte:BTH_II0402 alpha/beta fold family hydrolase; alpha/beta hydrolase fold protein 470785..471741 Ralstonia pickettii 12D 8018071 YP_002980425.1 CDS Rpic12D_0447 NC_012856.1 471941 473644 R PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: rso:RSc0547 sugar transporter transmembrane protein; major facilitator superfamily protein complement(471941..473644) Ralstonia pickettii 12D 8018073 YP_002980426.1 CDS Rpic12D_0448 NC_012856.1 474169 474477 D PFAM: protein of unknown function DUF485; KEGG: bur:Bcep18194_B1981 hypothetical protein; hypothetical protein 474169..474477 Ralstonia pickettii 12D 8018074 YP_002980427.1 CDS Rpic12D_0449 NC_012856.1 474474 476204 D TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: bur:Bcep18194_B1980 Na+/solute symporter; SSS sodium solute transporter superfamily protein 474474..476204 Ralstonia pickettii 12D 8018075 YP_002980428.1 CDS Rpic12D_0450 NC_012856.1 476268 478094 D PFAM: protein of unknown function DUF294 nucleotidyltransferase ; CBS domain containing protein; cyclic nucleotide-binding; SMART: CBS domain containing protein; KEGG: pna:Pnap_0480 cyclic nucleotide-binding protein; CBS domain and cyclic nucleotide-regulated nucleotidyltransferase 476268..478094 Ralstonia pickettii 12D 8018076 YP_002980429.1 CDS Rpic12D_0451 NC_012856.1 478097 478747 D 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 478097..478747 Ralstonia pickettii 12D 8018077 YP_002980430.1 CDS Rpic12D_0452 NC_012856.1 478757 479068 R KEGG: rso:RSc0548 hypothetical protein; hypothetical protein complement(478757..479068) Ralstonia pickettii 12D 8018078 YP_002980431.1 CDS Rpic12D_0453 NC_012856.1 479065 480645 R PFAM: Two-component sensor kinase domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rso:RSc0549 transmembrane sensor histidine kinase transcription regulator protein; histidine kinase complement(479065..480645) Ralstonia pickettii 12D 8018079 YP_002980432.1 CDS Rpic12D_0454 NC_012856.1 480638 481345 R PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: rso:RSc0550 response regulator transcription regulator protein; winged helix family two component transcriptional regulator complement(480638..481345) Ralstonia pickettii 12D 8018080 YP_002980433.1 CDS recA NC_012856.1 481611 482669 D catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 481611..482669 Ralstonia pickettii 12D 8018081 YP_002980434.1 CDS recX NC_012856.1 482780 483259 D binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 482780..483259 Ralstonia pickettii 12D 8018082 YP_002980435.1 CDS Rpic12D_0457 NC_012856.1 483546 484172 D KEGG: rso:RSc0553 hypothetical protein; hypothetical protein 483546..484172 Ralstonia pickettii 12D 8018083 YP_002980436.1 CDS sucC NC_012856.1 484239 485405 D catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 484239..485405 Ralstonia pickettii 12D 8018084 YP_002980437.1 CDS Rpic12D_0459 NC_012856.1 485494 486375 D Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 485494..486375 Ralstonia pickettii 12D 8018085 YP_002980438.1 CDS Rpic12D_0460 NC_012856.1 486524 487219 D PFAM: integral membrane protein TerC; KEGG: rso:RSc0556 hypothetical protein; integral membrane protein TerC 486524..487219 Ralstonia pickettii 12D 8018086 YP_002980439.1 CDS Rpic12D_0461 NC_012856.1 487403 487906 D KEGG: eba:ebB136 fimbrial protein precursor PilE (MS11 antigen); fimbrial protein PilE 487403..487906 Ralstonia pickettii 12D 8018087 YP_002980440.1 CDS Rpic12D_0462 NC_012856.1 487897 487995 R hypothetical protein complement(487897..487995) Ralstonia pickettii 12D 8018088 YP_002980441.1 CDS Rpic12D_0463 NC_012856.1 488360 488863 D KEGG: rso:RSc0558 type 4 fimbrial pilin signal peptide protein; type 4 fimbrial pilin signal peptide protein 488360..488863 Ralstonia pickettii 12D 8018089 YP_002980442.1 CDS Rpic12D_0464 NC_012856.1 489060 490832 D PFAM: O-antigen polymerase; KEGG: rso:RSc0559 hypothetical protein; O-antigen polymerase 489060..490832 Ralstonia pickettii 12D 8018090 YP_002980443.1 CDS Rpic12D_0465 NC_012856.1 490829 490936 D hypothetical protein 490829..490936 Ralstonia pickettii 12D 8018091 YP_002980444.1 CDS Rpic12D_0466 NC_012856.1 491010 492779 D PFAM: O-antigen polymerase; KEGG: rso:RSc0559 hypothetical protein; O-antigen polymerase 491010..492779 Ralstonia pickettii 12D 8018092 YP_002980445.1 CDS Rpic12D_0467 NC_012856.1 492951 493466 D KEGG: rso:RSc0558 type 4 fimbrial pilin signal peptide protein; type 4 fimbrial pilin signal peptide protein 492951..493466 Ralstonia pickettii 12D 8018093 YP_002980446.1 CDS moaC NC_012856.1 493532 494008 R MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC complement(493532..494008) Ralstonia pickettii 12D 8018094 YP_002980447.1 CDS Rpic12D_0469 NC_012856.1 494114 495817 D PFAM: peptidase M48 Ste24p; Tetratricopeptide TPR_2 repeat protein; KEGG: rso:RSc0561 signal peptide protein; peptidase M48 Ste24p 494114..495817 Ralstonia pickettii 12D 8018095 YP_002980448.1 CDS Rpic12D_0470 NC_012856.1 495838 496419 R KEGG: rso:RSc0562 hypothetical protein; hypothetical protein complement(495838..496419) Ralstonia pickettii 12D 8018096 YP_002980449.1 CDS Rpic12D_0471 NC_012856.1 496412 497488 R PFAM: alpha/beta hydrolase fold; KEGG: rso:RSc0563 hypothetical protein; alpha/beta hydrolase fold protein complement(496412..497488) Ralstonia pickettii 12D 8018097 YP_002980450.1 CDS Rpic12D_0472 NC_012856.1 497523 497963 R KEGG: rso:RSc0564 hypothetical protein; hypothetical protein complement(497523..497963) Ralstonia pickettii 12D 8018098 YP_002980451.1 CDS Rpic12D_0473 NC_012856.1 497989 499014 R TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9; KEGG: rso:RSc0565 ADP-heptose--lipopolysaccharide heptosyltransferase II protein; lipopolysaccharide heptosyltransferase II complement(497989..499014) Ralstonia pickettii 12D 8018099 YP_002980452.1 CDS Rpic12D_0474 NC_012856.1 499064 499261 R KEGG: rso:RSc0566 hypothetical protein; hypothetical protein complement(499064..499261) Ralstonia pickettii 12D 8018100 YP_002980453.1 CDS Rpic12D_0475 NC_012856.1 499589 500383 D PFAM: AzlC family protein; KEGG: rso:RSc0568 hypothetical protein; AzlC family protein 499589..500383 Ralstonia pickettii 12D 8018101 YP_002980454.1 CDS Rpic12D_0476 NC_012856.1 500380 500703 D PFAM: branched-chain amino acid transport; KEGG: rso:RSc0569 hypothetical protein; branched-chain amino acid transport 500380..500703 Ralstonia pickettii 12D 8018102 YP_002980455.1 CDS Rpic12D_0477 NC_012856.1 500706 501602 D TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RSc0570 hypothetical protein; RarD protein, DMT superfamily transporter 500706..501602 Ralstonia pickettii 12D 8018103 YP_002980456.1 CDS pgk NC_012856.1 501722 502933 D Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 501722..502933 Ralstonia pickettii 12D 8018104 YP_002980457.1 CDS Rpic12D_0479 NC_012856.1 502982 504421 D catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 502982..504421 Ralstonia pickettii 12D 8018105 YP_002980458.1 CDS Rpic12D_0480 NC_012856.1 504509 505573 D class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase 504509..505573 Ralstonia pickettii 12D 8018106 YP_002980459.1 CDS Rpic12D_0481 NC_012856.1 505710 506633 D catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 505710..506633 Ralstonia pickettii 12D 8018107 YP_002980460.1 CDS Rpic12D_0482 NC_012856.1 506649 507158 D KEGG: rso:RSc0575 phosphoribosylaminoimidazole carboxylase catalytic subunit protein; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 506649..507158 Ralstonia pickettii 12D 8018108 YP_002980461.1 CDS Rpic12D_0483 NC_012856.1 507178 508413 D With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase 507178..508413 Ralstonia pickettii 12D 8018109 YP_002980462.1 CDS Rpic12D_0484 NC_012856.1 508427 509440 D TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; SUA5 domain protein; KEGG: rso:RSc0577 hypothetical protein; Sua5/YciO/YrdC/YwlC family protein 508427..509440 Ralstonia pickettii 12D 8018110 YP_002980463.1 CDS Rpic12D_0485 NC_012856.1 509586 510629 D PFAM: lipolytic protein G-D-S-L family; KEGG: rso:RSc0580 lipase / esterase protein; G-D-S-L family lipolytic protein 509586..510629 Ralstonia pickettii 12D 8018111 YP_002980464.1 CDS Rpic12D_0486 NC_012856.1 510981 511508 R TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: rso:RSc0583 molybdopterin-guanine dinucleotide biosynthesis protein B; molybdopterin-guanine dinucleotide biosynthesis protein B complement(510981..511508) Ralstonia pickettii 12D 8018112 YP_002980465.1 CDS Rpic12D_0487 NC_012856.1 511505 513043 R KEGG: rso:RSc0584 D-alanyl-D-alanine carboxypeptidase; TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase complement(511505..513043) Ralstonia pickettii 12D 8018113 YP_002980466.1 CDS Rpic12D_0488 NC_012856.1 513184 515787 R TIGRFAM: DNA ligase D; DNA polymerase LigD, ligase domain protein; DNA polymerase LigD, polymerase domain protein; DNA ligase D, 3'-phosphoesterase domain protein; PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; DNA primase small subunit; KEGG: psb:Psyr_3245 ATP-dependent DNA ligase; DNA ligase D complement(513184..515787) Ralstonia pickettii 12D 8018114 YP_002980467.1 CDS Rpic12D_0489 NC_012856.1 515806 516720 R KEGG: bph:Bphy_0980 Ku protein; TIGRFAM: Ku protein; PFAM: Ku domain protein; SMART: Ku domain protein; Ku protein complement(515806..516720) Ralstonia pickettii 12D 8018115 YP_002980468.1 CDS Rpic12D_0490 NC_012856.1 516912 518063 D PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc0585 transport transmembrane protein; major facilitator superfamily protein 516912..518063 Ralstonia pickettii 12D 8018116 YP_002980469.1 CDS Rpic12D_0491 NC_012856.1 518276 518665 D KEGG: rso:RSc0586 hypothetical protein; hypothetical protein 518276..518665 Ralstonia pickettii 12D 8018117 YP_002980470.1 CDS Rpic12D_0492 NC_012856.1 518685 519497 D KEGG: rso:RSc0587 hypothetical protein; hypothetical protein 518685..519497 Ralstonia pickettii 12D 8018118 YP_002980471.1 CDS Rpic12D_0493 NC_012856.1 519487 520275 R PFAM: protein of unknown function DUF1045; KEGG: reh:H16_B1290 hypothetical protein; hypothetical protein complement(519487..520275) Ralstonia pickettii 12D 8018119 YP_002980472.1 CDS Rpic12D_0494 NC_012856.1 520284 521459 R PFAM: amidohydrolase; amidohydrolase; KEGG: reu:Reut_B4184 amidohydrolase:amidohydrolase-like; amidohydrolase complement(520284..521459) Ralstonia pickettii 12D 8018120 YP_002980473.1 CDS Rpic12D_0495 NC_012856.1 521630 524353 D KEGG: rso:RSc0588 hypothetical protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; GAF domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; GAF domain protein; PAS domain containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 521630..524353 Ralstonia pickettii 12D 8018121 YP_002980474.1 CDS Rpic12D_0496 NC_012856.1 524503 525915 D PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: bph:Bphy_1275 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 524503..525915 Ralstonia pickettii 12D 8018122 YP_002980475.1 CDS Rpic12D_0497 NC_012856.1 526264 527586 R PFAM: major facilitator superfamily MFS_1; KEGG: rme:Rmet_1926 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(526264..527586) Ralstonia pickettii 12D 8018123 YP_002980476.1 CDS Rpic12D_0498 NC_012856.1 527756 529117 R catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase complement(527756..529117) Ralstonia pickettii 12D 8018124 YP_002980477.1 CDS Rpic12D_0499 NC_012856.1 529145 529822 R KEGG: rme:Rmet_1928 hypothetical protein; hypothetical protein complement(529145..529822) Ralstonia pickettii 12D 8018125 YP_002980478.1 CDS Rpic12D_0500 NC_012856.1 529869 530591 R PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: rme:Rmet_1929 transcriptional regulator, GntR family; GntR family transcriptional regulator complement(529869..530591) Ralstonia pickettii 12D 8018126 YP_002980479.1 CDS Rpic12D_0501 NC_012856.1 530768 532033 D PFAM: monooxygenase FAD-binding; KEGG: cti:RALTA_A0534 salicylate 1-monooxygenase; hypothetical protein 530768..532033 Ralstonia pickettii 12D 8018127 YP_002980480.1 CDS Rpic12D_0502 NC_012856.1 532079 533212 D PFAM: extracellular ligand-binding receptor; KEGG: reh:H16_A0577 ABC-type transporter, periplasmic component: HAAT family; extracellular ligand-binding receptor 532079..533212 Ralstonia pickettii 12D 8018128 YP_002980481.1 CDS Rpic12D_0503 NC_012856.1 533286 533801 D PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rso:RSc0590 transcription regulator protein; MarR family transcriptional regulator 533286..533801 Ralstonia pickettii 12D 8018129 YP_002980482.1 CDS Rpic12D_0504 NC_012856.1 533877 534218 R KEGG: rso:RSc0591 hypothetical protein; hypothetical protein complement(533877..534218) Ralstonia pickettii 12D 8018130 YP_002980483.1 CDS Rpic12D_0505 NC_012856.1 534562 535776 D KEGG: rso:RSc0592 hypothetical protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 534562..535776 Ralstonia pickettii 12D 8018131 YP_002980484.1 CDS Rpic12D_0506 NC_012856.1 535804 535977 R hypothetical protein complement(535804..535977) Ralstonia pickettii 12D 8018132 YP_002980485.1 CDS Rpic12D_0507 NC_012856.1 536210 537196 D KEGG: rso:RSc0593 hypothetical protein; hypothetical protein 536210..537196 Ralstonia pickettii 12D 8018133 YP_002980486.1 CDS Rpic12D_0508 NC_012856.1 537396 537716 D KEGG: rso:RSc0594 hypothetical protein; hypothetical protein 537396..537716 Ralstonia pickettii 12D 8018134 YP_002980487.1 CDS Rpic12D_0509 NC_012856.1 537756 539987 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rso:RSc0595 outer membrane receptor signal peptide protein; TonB-dependent receptor 537756..539987 Ralstonia pickettii 12D 8018135 YP_002980488.1 CDS Rpic12D_0510 NC_012856.1 540042 540677 R KEGG: bpy:Bphyt_4932 hypothetical protein; hypothetical protein complement(540042..540677) Ralstonia pickettii 12D 8018136 YP_002980489.1 CDS Rpic12D_0511 NC_012856.1 540815 541402 R KEGG: bcn:Bcen_1390 hypothetical protein; hypothetical protein complement(540815..541402) Ralstonia pickettii 12D 8018137 YP_002980490.1 CDS Rpic12D_0512 NC_012856.1 541575 541880 D KEGG: rso:RSc0596 hypothetical protein; hypothetical protein 541575..541880 Ralstonia pickettii 12D 8018138 YP_002980491.1 CDS Rpic12D_0513 NC_012856.1 541877 542080 D KEGG: rso:RSc0597 hypothetical protein; hypothetical protein 541877..542080 Ralstonia pickettii 12D 8018139 YP_002980492.1 CDS Rpic12D_0514 NC_012856.1 542099 542440 R KEGG: rso:RSc0598 hypothetical protein; hypothetical protein complement(542099..542440) Ralstonia pickettii 12D 8018140 YP_002980493.1 CDS Rpic12D_0515 NC_012856.1 542645 544108 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: rso:RSc0599 transcription regulator protein; GntR family transcriptional regulator 542645..544108 Ralstonia pickettii 12D 8018141 YP_002980494.1 CDS Rpic12D_0516 NC_012856.1 544118 544786 R PFAM: protein of unknown function DUF330; KEGG: rso:RSc0600 hypothetical protein; hypothetical protein complement(544118..544786) Ralstonia pickettii 12D 8018142 YP_002980495.1 CDS Rpic12D_0517 NC_012856.1 544783 546426 R PFAM: mammalian cell entry related domain protein; KEGG: rso:RSc0601 hypothetical protein; mammalian cell entry domain-containing protein complement(544783..546426) Ralstonia pickettii 12D 8018143 YP_002980496.1 CDS Rpic12D_0518 NC_012856.1 546423 547160 R PFAM: Paraquat-inducible protein A; KEGG: rso:RSc0602 hypothetical protein; Paraquat-inducible protein A complement(546423..547160) Ralstonia pickettii 12D 8018144 YP_002980497.1 CDS Rpic12D_0519 NC_012856.1 547157 547936 R PFAM: Paraquat-inducible protein A; KEGG: rso:RSc0603 hypothetical protein; Paraquat-inducible protein A complement(547157..547936) Ralstonia pickettii 12D 8018145 YP_002980498.1 CDS Rpic12D_0520 NC_012856.1 548173 548682 D KEGG: mgi:Mflv_5091 triple helix repeat-containing collagen; hypothetical protein 548173..548682 Ralstonia pickettii 12D 8018146 YP_002980499.1 CDS Rpic12D_0521 NC_012856.1 548701 549564 R KEGG: rso:RSc0604 hydrolase oxidoreductase protein; TIGRFAM: S-formylglutathione hydrolase; PFAM: esterase; S-formylglutathione hydrolase complement(548701..549564) Ralstonia pickettii 12D 8018147 YP_002980500.1 CDS Rpic12D_0522 NC_012856.1 549587 550693 R TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: rso:RSp0069 bifunctional: glutathione-dependent formaldehyde dehydrogenase/alcohol dehydrogenase class III; S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase complement(549587..550693) Ralstonia pickettii 12D 8018148 YP_002980501.1 CDS Rpic12D_0523 NC_012856.1 550897 552723 D PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: rso:RSc0606 methyl-accepting chemotaxis transmembrane protein; Cache sensor-containing methyl-accepting chemotaxis sensory transducer 550897..552723 Ralstonia pickettii 12D 8018149 YP_002980502.1 CDS Rpic12D_0524 NC_012856.1 552751 553419 R PFAM: Glutathione S-transferase domain; KEGG: bac:BamMC406_3382 glutathione S-transferase domain-containing protein; glutathione S-transferase complement(552751..553419) Ralstonia pickettii 12D 8018150 YP_002980503.1 CDS Rpic12D_0525 NC_012856.1 553604 555361 R KEGG: bxe:Bxe_B2626 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(553604..555361) Ralstonia pickettii 12D 8018151 YP_002980504.1 CDS Rpic12D_0526 NC_012856.1 555709 555990 R PFAM: antibiotic biosynthesis monooxygenase; KEGG: bac:BamMC406_5978 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase complement(555709..555990) Ralstonia pickettii 12D 8018152 YP_002980505.1 CDS Rpic12D_0528 NC_012856.1 557325 558569 R PFAM: saccharopine dehydrogenase; KEGG: bur:Bcep18194_C7476 saccharopine dehydrogenase; saccharopine dehydrogenase complement(557325..558569) Ralstonia pickettii 12D 8018154 YP_002980506.1 CDS Rpic12D_0529 NC_012856.1 559016 560602 D Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates; isocitrate lyase 559016..560602 Ralstonia pickettii 12D 8018155 YP_002980507.1 CDS Rpic12D_0530 NC_012856.1 560872 562167 D TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_6665 major facilitator superfamily metabolite/H(+) symporter; major facilitator superfamily metabolite/H+ symporter 560872..562167 Ralstonia pickettii 12D 8018156 YP_002980508.1 CDS Rpic12D_0531 NC_012856.1 562230 563012 D KEGG: bcm:Bcenmc03_6262 extracellular solute-binding protein; extracellular solute-binding protein 562230..563012 Ralstonia pickettii 12D 8018157 YP_002980509.1 CDS Rpic12D_0532 NC_012856.1 563049 563966 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bam:Bamb_5626 LysR family transcriptional regulator; LysR family transcriptional regulator complement(563049..563966) Ralstonia pickettii 12D 8018158 YP_002980510.1 CDS Rpic12D_0533 NC_012856.1 564165 565607 R KEGG: bph:Bphy_5179 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(564165..565607) Ralstonia pickettii 12D 8018159 YP_002980511.1 CDS groES NC_012856.1 565718 566008 D 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 565718..566008 Ralstonia pickettii 12D 8018160 YP_002980512.1 CDS groEL NC_012856.1 566110 567753 D 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 566110..567753 Ralstonia pickettii 12D 8018161 YP_002980513.1 CDS Rpic12D_0536 NC_012856.1 567984 569066 D PFAM: protein of unknown function DUF898 transmembrane; KEGG: rso:RSc0643 hypothetical protein; hypothetical protein 567984..569066 Ralstonia pickettii 12D 8018162 YP_002980514.1 CDS Rpic12D_0537 NC_012856.1 569095 570189 D PFAM: peptidase M48 Ste24p; KEGG: rso:RSc0644 transmembrane protein; peptidase M48 Ste24p 569095..570189 Ralstonia pickettii 12D 8018163 YP_002980515.1 CDS Rpic12D_0538 NC_012856.1 570209 570637 R PFAM: GtrA family protein; KEGG: rme:Rmet_0658 GtrA-like protein; GtrA family protein complement(570209..570637) Ralstonia pickettii 12D 8018164 YP_002980516.1 CDS Rpic12D_0539 NC_012856.1 570657 571730 R PFAM: glycosyl transferase family 2; KEGG: rme:Rmet_0656 glycosyl transferase, family 2; family 2 glycosyl transferase complement(570657..571730) Ralstonia pickettii 12D 8018165 YP_002980517.1 CDS Rpic12D_0540 NC_012856.1 571787 573103 R KEGG: rme:Rmet_0654 hypothetical protein; hypothetical protein complement(571787..573103) Ralstonia pickettii 12D 8018166 YP_002980518.1 CDS Rpic12D_0541 NC_012856.1 573108 574142 R KEGG: rso:RSc0648 transmembrane protein; hypothetical protein complement(573108..574142) Ralstonia pickettii 12D 8018167 YP_002980519.1 CDS Rpic12D_0542 NC_012856.1 574181 574654 R PFAM: TadE family protein; KEGG: rso:RSc0649 transmembrane protein; TadE family protein complement(574181..574654) Ralstonia pickettii 12D 8018168 YP_002980520.1 CDS Rpic12D_0543 NC_012856.1 574679 575620 R PFAM: type II secretion system protein; KEGG: rso:RSc0650 tight adherence TadC-related transmembrane protein; type II secretion system protein complement(574679..575620) Ralstonia pickettii 12D 8018169 YP_002980521.1 CDS Rpic12D_0544 NC_012856.1 575671 576648 R PFAM: type II secretion system protein; KEGG: rso:RSc0651 tight adherence TadB-related transmembrane protein; type II secretion system protein complement(575671..576648) Ralstonia pickettii 12D 8018170 YP_002980522.1 CDS Rpic12D_0545 NC_012856.1 576660 578024 R PFAM: type II secretion system protein E; SMART: AAA ATPase; KEGG: rso:RSc0652 secretion ATPase protein; type II secretion system protein E complement(576660..578024) Ralstonia pickettii 12D 8018171 YP_002980523.1 CDS Rpic12D_0546 NC_012856.1 578066 579259 R KEGG: rso:RSc0653 pilus assembly protein; response regulator receiver protein complement(578066..579259) Ralstonia pickettii 12D 8018172 YP_002980524.1 CDS Rpic12D_0547 NC_012856.1 579319 579627 R KEGG: rso:RSc0654 lipoprotein; lipoprotein complement(579319..579627) Ralstonia pickettii 12D 8018173 YP_002980525.1 CDS Rpic12D_0548 NC_012856.1 579660 581471 R PFAM: type II and III secretion system protein; transport-associated; KEGG: rso:RSc0655 outer membrane channel protein; type II and III secretion system protein complement(579660..581471) Ralstonia pickettii 12D 8018174 YP_002980526.1 CDS Rpic12D_0549 NC_012856.1 581590 582441 R TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: rso:RSc0656 pilus assembly transmembrane protein; Flp pilus assembly protein CpaB complement(581590..582441) Ralstonia pickettii 12D 8018175 YP_002980527.1 CDS Rpic12D_0550 NC_012856.1 582799 583338 R PFAM: peptidase A24A prepilin type IV; KEGG: rso:RSc0657 prepilin peptidase transmembrane protein; peptidase A24A prepilin type IV complement(582799..583338) Ralstonia pickettii 12D 8018176 YP_002980528.1 CDS Rpic12D_0551 NC_012856.1 583467 583643 R PFAM: Flp/Fap pilin component; KEGG: rso:RSc0660 pilin transmembrane protein; Flp/Fap pilin component complement(583467..583643) Ralstonia pickettii 12D 8018177 YP_002980529.1 CDS Rpic12D_0552 NC_012856.1 584120 584233 R hypothetical protein complement(584120..584233) Ralstonia pickettii 12D 8018178 YP_002980530.1 CDS Rpic12D_0553 NC_012856.1 585060 585584 R PFAM: protein of unknown function DUF477; KEGG: rso:RSc0662 hypothetical protein; hypothetical protein complement(585060..585584) Ralstonia pickettii 12D 8018179 YP_002980531.1 CDS Rpic12D_0554 NC_012856.1 585600 586463 R PFAM: protein of unknown function DUF477; KEGG: rso:RSc0663 glycine rich transmembrane protein; hypothetical protein complement(585600..586463) Ralstonia pickettii 12D 8018180 YP_002980532.1 CDS Rpic12D_0555 NC_012856.1 586477 587103 R PFAM: LemA family protein; KEGG: rso:RSc0664 lipoprotein; LemA family protein complement(586477..587103) Ralstonia pickettii 12D 8018181 YP_002980533.1 CDS Rpic12D_0556 NC_012856.1 587210 587413 R hypothetical protein complement(587210..587413) Ralstonia pickettii 12D 8018182 YP_002980534.1 CDS Rpic12D_0557 NC_012856.1 587506 588414 D TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: rso:RSc0665 dihydrodipicolinate synthase-like transmembrane protein; dihydrodipicolinate synthase 587506..588414 Ralstonia pickettii 12D 8018183 YP_002980535.1 CDS Rpic12D_0558 NC_012856.1 588507 589808 R Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase complement(588507..589808) Ralstonia pickettii 12D 8018184 YP_002980536.1 CDS Rpic12D_0559 NC_012856.1 590024 590206 D PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: rso:RSc0667 rubredoxin protein; rubredoxin-type Fe(Cys)4 protein 590024..590206 Ralstonia pickettii 12D 8018185 YP_002980537.1 CDS Rpic12D_0560 NC_012856.1 590499 590996 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: rso:RSc0668 twitching motility two-component response regulator transcription regulator protein; response regulator receiver protein 590499..590996 Ralstonia pickettii 12D 8018186 YP_002980538.1 CDS Rpic12D_0561 NC_012856.1 591027 591395 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: rso:RSc0669 twitching motility two-component response regulator transcription regulator protein; response regulator receiver protein 591027..591395 Ralstonia pickettii 12D 8018187 YP_002980539.1 CDS Rpic12D_0562 NC_012856.1 591472 592017 D PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: rso:RSc0670 twitching motility protein; CheW protein 591472..592017 Ralstonia pickettii 12D 8018188 YP_002980540.1 CDS Rpic12D_0563 NC_012856.1 592280 594517 D PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: rso:RSc0671 twitching motility transmembrane protein; methyl-accepting chemotaxis sensory transducer 592280..594517 Ralstonia pickettii 12D 8018189 YP_002980541.1 CDS Rpic12D_0564 NC_012856.1 594607 600645 D PFAM: response regulator receiver; CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; SMART: response regulator receiver; Hpt domain protein; CheW domain protein; ATP-binding region ATPase domain protein; KEGG: rso:RSc0672 composite two component regulatory (sensor histidine kinase and response regulator hybrid) transcription regulator protein; CheA signal transduction histidine kinase 594607..600645 Ralstonia pickettii 12D 8018190 YP_002980542.1 CDS Rpic12D_0565 NC_012856.1 600715 602271 R PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: cti:RALTA_A2399 deoxyribodipyrimidine photolyase (photoreactivation), FAD-binding; deoxyribodipyrimidine photo-lyase complement(600715..602271) Ralstonia pickettii 12D 8018191 YP_002980543.1 CDS Rpic12D_0566 NC_012856.1 602351 603097 D PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: rso:RSc0674 ribosomal small subunit pseudouridine synthase A protein; pseudouridine synthase 602351..603097 Ralstonia pickettii 12D 8018192 YP_002980544.1 CDS Rpic12D_0567 NC_012856.1 603194 603766 D PFAM: protein of unknown function DUF179; KEGG: rso:RSc0675 hypothetical protein; hypothetical protein 603194..603766 Ralstonia pickettii 12D 8018193 YP_002980545.1 CDS Rpic12D_0568 NC_012856.1 603759 604190 D similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 603759..604190 Ralstonia pickettii 12D 8018194 YP_002980546.1 CDS Rpic12D_0569 NC_012856.1 604187 604705 D regulates pyrimidine biosynthesis by binding to the mRNA of the pyr genes, also has been shown to have uracil phosphoribosyltransferase activity; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase 604187..604705 Ralstonia pickettii 12D 8018195 YP_002980547.1 CDS pyrB NC_012856.1 604767 605738 D catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 604767..605738 Ralstonia pickettii 12D 8018196 YP_002980548.1 CDS Rpic12D_0571 NC_012856.1 605747 607024 D Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 605747..607024 Ralstonia pickettii 12D 8018197 YP_002980549.1 CDS Rpic12D_0572 NC_012856.1 607011 607808 D PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: rso:RSc0680 1-acyl-sn-glycerol-3-phosphate acyltransferase transmembrane protein; phospholipid/glycerol acyltransferase 607011..607808 Ralstonia pickettii 12D 8018198 YP_002980550.1 CDS apaH NC_012856.1 607818 608708 R hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase complement(607818..608708) Ralstonia pickettii 12D 8018199 YP_002980551.1 CDS Rpic12D_0574 NC_012856.1 608829 609893 D TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: reu:Reut_A0712 dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 608829..609893 Ralstonia pickettii 12D 8018200 YP_002980552.1 CDS Rpic12D_0575 NC_012856.1 609883 610800 D KEGG: cti:RALTA_A2389 TDP-rhamnose synthetase, NAD(P)-binding; TIGRFAM: dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase 609883..610800 Ralstonia pickettii 12D 8018201 YP_002980553.1 CDS Rpic12D_0576 NC_012856.1 610811 611362 D KEGG: rso:RSc0685 dTDP-4-dehydrorhamnose 3,5-epimerase protein; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 610811..611362 Ralstonia pickettii 12D 8018202 YP_002980554.1 CDS Rpic12D_0577 NC_012856.1 611443 613326 D PFAM: polysaccharide biosynthesis protein CapD; Male sterility domain; dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase; KEGG: cvi:CV_4115 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein CapD 611443..613326 Ralstonia pickettii 12D 8018203 YP_002980555.1 CDS Rpic12D_0578 NC_012856.1 613674 615035 D KEGG: reu:Reut_A2565 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase 613674..615035 Ralstonia pickettii 12D 8018204 YP_002980556.1 CDS Rpic12D_0579 NC_012856.1 615050 616000 D PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; dTDP-4-dehydrorhamnose reductase; KEGG: hya:HY04AAS1_1611 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 615050..616000 Ralstonia pickettii 12D 8018205 YP_002980557.1 CDS Rpic12D_0580 NC_012856.1 616034 617035 D PFAM: polysaccharide biosynthesis protein CapD; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; dTDP-4-dehydrorhamnose reductase; short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: pde:Pden_3558 polysaccharide biosynthesis protein CapD; polysaccharide biosynthesis protein CapD 616034..617035 Ralstonia pickettii 12D 8018206 YP_002980558.1 CDS Rpic12D_0581 NC_012856.1 617032 618180 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: bpt:Bpet2303 sugar aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase 617032..618180 Ralstonia pickettii 12D 8018207 YP_002980559.1 CDS Rpic12D_0582 NC_012856.1 618177 619070 D PFAM: aldo/keto reductase; KEGG: lbf:LBF_1982 aryl-alcohol dehydrogenase-related oxidoreductase; aldo/keto reductase 618177..619070 Ralstonia pickettii 12D 8018208 YP_002980560.1 CDS Rpic12D_0583 NC_012856.1 619070 619840 D PFAM: acylneuraminate cytidylyltransferase; KEGG: cak:Caul_2891 acylneuraminate cytidylyltransferase; acylneuraminate cytidylyltransferase 619070..619840 Ralstonia pickettii 12D 8018209 YP_002980561.1 CDS Rpic12D_0584 NC_012856.1 619846 621135 D PFAM: aminotransferase class-III; KEGG: swo:Swol_0203 aminotransferase, class III pyridoxal-phosphate dependent; class III aminotransferase 619846..621135 Ralstonia pickettii 12D 8018210 YP_002980562.1 CDS Rpic12D_0585 NC_012856.1 621140 622213 D PFAM: glycosyltransferase 28 domain; KEGG: har:HEAR1124 polysaccharide biosynthesis protein; Glycosyltransferase 28 domain-containing protein 621140..622213 Ralstonia pickettii 12D 8018211 YP_002980563.1 CDS Rpic12D_0586 NC_012856.1 622220 622786 D PFAM: GCN5-related N-acetyltransferase; KEGG: psa:PST_3836 flagellin modification protein FlmH; N-acetyltransferase GCN5 622220..622786 Ralstonia pickettii 12D 8018212 YP_002980564.1 CDS Rpic12D_0587 NC_012856.1 622783 623832 D PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; KEGG: har:HEAR1126 N-acetylneuraminate synthase; N-acylneuraminate-9-phosphate synthase 622783..623832 Ralstonia pickettii 12D 8018213 YP_002980565.1 CDS Rpic12D_0588 NC_012856.1 624075 624191 R hypothetical protein complement(624075..624191) Ralstonia pickettii 12D 8018214 YP_002980566.1 CDS Rpic12D_0589 NC_012856.1 624350 625447 D hypothetical protein 624350..625447 Ralstonia pickettii 12D 8018215 YP_002980567.1 CDS Rpic12D_0590 NC_012856.1 625481 626419 D KEGG: amr:AM1_3974 hypothetical protein; hypothetical protein 625481..626419 Ralstonia pickettii 12D 8018216 YP_002980568.1 CDS Rpic12D_0591 NC_012856.1 626503 627741 D KEGG: mex:Mext_4583 polysaccharide biosynthesis protein; hypothetical protein 626503..627741 Ralstonia pickettii 12D 8018217 YP_002980569.1 CDS Rpic12D_0592 NC_012856.1 627743 628369 D KEGG: lbf:LBF_1966 acetyltransferase (isoleucine patch superfamily); acetyltransferase (isoleucine patch superfamily)-like protein 627743..628369 Ralstonia pickettii 12D 8018218 YP_002980570.1 CDS Rpic12D_0593 NC_012856.1 628366 629562 D hypothetical protein 628366..629562 Ralstonia pickettii 12D 8018219 YP_002980571.1 CDS Rpic12D_0594 NC_012856.1 629559 630794 D PFAM: glycosyl transferase group 1; KEGG: mes:Meso_0492 glycosyl transferase, group 1; group1 glycosyl transferase 629559..630794 Ralstonia pickettii 12D 8018220 YP_002980572.1 CDS Rpic12D_0595 NC_012856.1 630804 631448 D KEGG: cvi:CV_4122 hypothetical protein; hypothetical protein 630804..631448 Ralstonia pickettii 12D 8018221 YP_002980573.1 CDS Rpic12D_0596 NC_012856.1 631530 632684 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: mpt:Mpe_A0607 lipopolysaccharide biosynthesis protein; DegT/DnrJ/EryC1/StrS aminotransferase 631530..632684 Ralstonia pickettii 12D 8018222 YP_002980574.1 CDS Rpic12D_0597 NC_012856.1 632684 633280 D PFAM: sugar transferase; KEGG: bav:BAV0093 sugar transferase; sugar transferase 632684..633280 Ralstonia pickettii 12D 8018223 YP_002980575.1 CDS Rpic12D_0598 NC_012856.1 633609 634280 D PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sye:Syncc9902_0043 methylase involved in ubiquinone/menaquinone biosynthesis-like; type 11 methyltransferase 633609..634280 Ralstonia pickettii 12D 8018224 YP_002980576.1 CDS Rpic12D_0599 NC_012856.1 634373 635173 R PFAM: lipopolysaccharide biosynthesis protein; KEGG: rme:Rmet_2722 lipopolysaccharide biosynthesis; lipopolysaccharide biosynthesis protein complement(634373..635173) Ralstonia pickettii 12D 8018225 YP_002980577.1 CDS Rpic12D_0600 NC_012856.1 635444 636832 D PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: rso:RSc0691 phosphomannomutase or phosphoglucomutase protein; phosphomannomutase 635444..636832 Ralstonia pickettii 12D 8018226 YP_002980578.1 CDS Rpic12D_0601 NC_012856.1 636876 637874 D TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9; KEGG: rso:RSc0692 lipopolysaccharide heptosyltransferase protein; lipopolysaccharide heptosyltransferase 636876..637874 Ralstonia pickettii 12D 8018227 YP_002980579.1 CDS Rpic12D_0602 NC_012856.1 637874 639190 D catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase 637874..639190 Ralstonia pickettii 12D 8018228 YP_002980580.1 CDS Rpic12D_0603 NC_012856.1 639303 639965 D PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: rso:RSc0694 hypothetical protein; hypothetical protein 639303..639965 Ralstonia pickettii 12D 8018229 YP_002980581.1 CDS Rpic12D_0604 NC_012856.1 639966 641402 R TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: rso:RSc0695 porin (omp) ABC transporter protein; TolC family type I secretion outer membrane protein complement(639966..641402) Ralstonia pickettii 12D 8018230 YP_002980582.1 CDS Rpic12D_0605 NC_012856.1 641548 641880 R SMART: rhodanese; KEGG: rso:RSc0696 hypothetical protein; rhodanese domain-containing protein complement(641548..641880) Ralstonia pickettii 12D 8018231 YP_002980583.1 CDS Rpic12D_0606 NC_012856.1 641903 642613 R PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; Methyltransferase type 11; methyltransferase small; KEGG: rso:RSc0697 protein-L-isoaspartate O-methyltransferase; protein-L-isoaspartate(D-aspartate) O-methyltransferase complement(641903..642613) Ralstonia pickettii 12D 8018232 YP_002980584.1 CDS Rpic12D_0607 NC_012856.1 642649 643416 R PFAM: regulatory protein TetR; KEGG: rso:RSc0698 transcription regulator protein; TetR family transcriptional regulator complement(642649..643416) Ralstonia pickettii 12D 8018233 YP_002980585.1 CDS Rpic12D_0608 NC_012856.1 643573 643830 D PFAM: protein of unknown function UPF0153; KEGG: azo:azo0713 hypothetical protein; hypothetical protein 643573..643830 Ralstonia pickettii 12D 8018234 YP_002980586.1 CDS Rpic12D_0609 NC_012856.1 643837 644430 D KEGG: rso:RSc0700 hypothetical protein; hypothetical protein 643837..644430 Ralstonia pickettii 12D 8018235 YP_002980587.1 CDS Rpic12D_0610 NC_012856.1 644482 645363 D BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; UDP pyrophosphate phosphatase 644482..645363 Ralstonia pickettii 12D 8018236 YP_002980588.1 CDS Rpic12D_0611 NC_012856.1 645483 646595 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: rso:RSc0702 NADH-dependent flavin oxidoreductase oxidoreductase protein; NADH:flavin oxidoreductase 645483..646595 Ralstonia pickettii 12D 8018237 YP_002980589.1 CDS trmB NC_012856.1 646621 647394 R tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase complement(646621..647394) Ralstonia pickettii 12D 8018238 YP_002980590.1 CDS Rpic12D_0613 NC_012856.1 647666 648574 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mpt:Mpe_A2328 LysR family transcriptional regulator; LysR family transcriptional regulator complement(647666..648574) Ralstonia pickettii 12D 8018239 YP_002980591.1 CDS Rpic12D_0614 NC_012856.1 648807 649958 R KEGG: bmj:BMULJ_00932 trypsin-like serine protease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; 2-alkenal reductase complement(648807..649958) Ralstonia pickettii 12D 8018240 YP_002980592.1 CDS Rpic12D_0615 NC_012856.1 649983 650948 R PFAM: peptidase M48 Ste24p; KEGG: dde:Dde_3419 M48 family peptidase; peptidase M48 Ste24p complement(649983..650948) Ralstonia pickettii 12D 8018241 YP_002980593.1 CDS Rpic12D_0616 NC_012856.1 650926 651423 R KEGG: bmj:BMULJ_00934 hypothetical protein; hypothetical protein complement(650926..651423) Ralstonia pickettii 12D 8018242 YP_002980594.1 CDS Rpic12D_0617 NC_012856.1 651420 653135 R PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; KEGG: bbt:BBta_7792 glutathione-regulated potassium-efflux system protein KefC (K(+)/H(+) antiporter); sodium/hydrogen exchanger complement(651420..653135) Ralstonia pickettii 12D 8018243 YP_002980595.1 CDS Rpic12D_0618 NC_012856.1 653139 653579 R TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: bmj:BMULJ_00936 thioredoxin 2; thioredoxin complement(653139..653579) Ralstonia pickettii 12D 8018244 YP_002980596.1 CDS Rpic12D_0619 NC_012856.1 653569 654714 R KEGG: bmu:Bmul_2303 hypothetical protein; hypothetical protein complement(653569..654714) Ralstonia pickettii 12D 8018245 YP_002980597.1 CDS Rpic12D_0620 NC_012856.1 654794 655405 R KEGG: mfa:Mfla_1163 hypothetical protein; hypothetical protein complement(654794..655405) Ralstonia pickettii 12D 8018246 YP_002980598.1 CDS Rpic12D_0621 NC_012856.1 655502 656389 R KEGG: oan:Oant_4474 hypothetical protein; hypothetical protein complement(655502..656389) Ralstonia pickettii 12D 8018247 YP_002980599.1 CDS Rpic12D_0622 NC_012856.1 656492 657406 R KEGG: oan:Oant_4473 hypothetical protein; hypothetical protein complement(656492..657406) Ralstonia pickettii 12D 8018248 YP_002980600.1 CDS Rpic12D_0623 NC_012856.1 657429 657887 R PFAM: heat shock protein Hsp20; KEGG: bmu:Bmul_2294 hypothetical protein; heat shock protein Hsp20 complement(657429..657887) Ralstonia pickettii 12D 8018249 YP_002980601.1 CDS Rpic12D_0624 NC_012856.1 657975 659792 R KEGG: mfa:Mfla_1168 FtsH-2 peptidase; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: ATPase AAA; peptidase M41; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH complement(657975..659792) Ralstonia pickettii 12D 8018250 YP_002980602.1 CDS Rpic12D_0625 NC_012856.1 659820 661250 R PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; KEGG: mfa:Mfla_1169 cardiolipin synthetase 2; phospholipase D/transphosphatidylase complement(659820..661250) Ralstonia pickettii 12D 8018251 YP_002980603.1 CDS Rpic12D_0627 NC_012856.1 662905 663237 D PFAM: transposase IS3/IS911 family protein; KEGG: mca:MCA0906 ISMca2, transposase, OrfA; transposase IS3/IS911 family protein 662905..663237 Ralstonia pickettii 12D 8018253 YP_002980604.1 CDS Rpic12D_0628 NC_012856.1 663234 664103 D PFAM: integrase catalytic region; KEGG: mca:MCA0907 ISMca2, transposase, OrfB; Integrase catalytic subunit 663234..664103 Ralstonia pickettii 12D 8018254 YP_002980605.1 CDS Rpic12D_0629 NC_012856.1 665517 666086 R PFAM: heat shock protein Hsp20; KEGG: mfa:Mfla_1171 heat shock protein HSP20; heat shock protein Hsp20 complement(665517..666086) Ralstonia pickettii 12D 8018255 YP_002980606.1 CDS Rpic12D_0630 NC_012856.1 666122 666403 R TIGRFAM: DNA binding domain protein, excisionase family; KEGG: bmu:Bmul_2286 DNA binding domain-containing protein; excisionase family DNA binding domain-containing protein complement(666122..666403) Ralstonia pickettii 12D 8018256 YP_002980607.1 CDS Rpic12D_0633 NC_012856.1 667672 668580 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mpt:Mpe_A2330 LysR family transcriptional regulator; LysR family transcriptional regulator 667672..668580 Ralstonia pickettii 12D 8018259 YP_002980608.1 CDS Rpic12D_0634 NC_012856.1 669120 669878 D KEGG: mpt:Mpe_A2331 hypothetical protein; hypothetical protein 669120..669878 Ralstonia pickettii 12D 8018260 YP_002980609.1 CDS Rpic12D_0635 NC_012856.1 670020 670238 D PFAM: Prophage CP4-57 regulatory; KEGG: mpt:Mpe_A2332 phage transcriptional regulator, AlpA; phage transcriptional regulator AlpA 670020..670238 Ralstonia pickettii 12D 8018261 YP_002980610.1 CDS Rpic12D_0636 NC_012856.1 670279 671145 D PFAM: cobyrinic acid ac-diamide synthase; KEGG: mpt:Mpe_A2333 chromosome partitioning protein; cobyrinic acid ac-diamide synthase 670279..671145 Ralstonia pickettii 12D 8018262 YP_002980611.1 CDS Rpic12D_0637 NC_012856.1 671129 671386 D KEGG: bpt:Bpet1441 hypothetical protein; hypothetical protein 671129..671386 Ralstonia pickettii 12D 8018263 YP_002980612.1 CDS Rpic12D_0638 NC_012856.1 671379 673058 D KEGG: mpt:Mpe_A2334 hypothetical protein; hypothetical protein 671379..673058 Ralstonia pickettii 12D 8018264 YP_002980613.1 CDS Rpic12D_0639 NC_012856.1 673072 673632 D KEGG: mpt:Mpe_A2335 hypothetical protein; hypothetical protein 673072..673632 Ralstonia pickettii 12D 8018265 YP_002980614.1 CDS Rpic12D_0640 NC_012856.1 673636 674895 D KEGG: eba:ebA2465 hypothetical protein; hypothetical protein 673636..674895 Ralstonia pickettii 12D 8018266 YP_002980615.1 CDS Rpic12D_0641 NC_012856.1 675125 675904 D PFAM: Domain of unknown function DUF1845; KEGG: eba:ebA2462 hypothetical protein; hypothetical protein 675125..675904 Ralstonia pickettii 12D 8018267 YP_002980616.1 CDS Rpic12D_0642 NC_012856.1 675901 676452 D KEGG: ajs:Ajs_2235 hypothetical protein; hypothetical protein 675901..676452 Ralstonia pickettii 12D 8018268 YP_002980617.1 CDS Rpic12D_0643 NC_012856.1 676449 676898 D binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 676449..676898 Ralstonia pickettii 12D 8018269 YP_002980618.1 CDS Rpic12D_0645 NC_012856.1 678981 681893 D PFAM: transposase Tn3 family protein; KEGG: rme:Rmet_1544 transposase Tn3; transposase Tn3 family protein 678981..681893 Ralstonia pickettii 12D 8018271 YP_002980619.1 CDS Rpic12D_0646 NC_012856.1 682926 683663 R TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: bmj:BMULJ_00927 NADPH-dependent FMN reductase; arsenical resistance protein ArsH complement(682926..683663) Ralstonia pickettii 12D 8018272 YP_002980620.1 CDS Rpic12D_0647 NC_012856.1 683641 684063 R TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: har:HEAR1960 arsenate reductase (glutaredoxin); arsenate reductase complement(683641..684063) Ralstonia pickettii 12D 8018273 YP_002980621.1 CDS Rpic12D_0648 NC_012856.1 684060 685292 R PFAM: major facilitator superfamily MFS_1; KEGG: har:HEAR1961 major facilitator superfamily transporter transmembrane protein; major facilitator superfamily protein complement(684060..685292) Ralstonia pickettii 12D 8018274 YP_002980622.1 CDS Rpic12D_0649 NC_012856.1 685295 686341 R TIGRFAM: arsenical-resistance protein; PFAM: bile acid:sodium symporter; KEGG: bmj:BMULJ_00925 ACR3 family arsenite transporter; arsenical-resistance protein complement(685295..686341) Ralstonia pickettii 12D 8018275 YP_002980623.1 CDS Rpic12D_0650 NC_012856.1 686338 688104 R KEGG: psa:PST_0237 arsenical pump-driving ATPase; TIGRFAM: arsenite-activated ATPase ArsA; PFAM: Anion-transporting ATPase; SMART: AAA ATPase; arsenite-activated ATPase ArsA complement(686338..688104) Ralstonia pickettii 12D 8018276 YP_002980624.1 CDS Rpic12D_0651 NC_012856.1 688117 688476 R PFAM: arsenic resistance operon trans-acting repressor ArsD; KEGG: psa:PST_0238 arsenic operon regulator; arsenic resistance operon trans-acting repressor ArsD complement(688117..688476) Ralstonia pickettii 12D 8018277 YP_002980625.1 CDS Rpic12D_0652 NC_012856.1 688519 689016 R PFAM: protein-tyrosine phosphatase, low molecular weight; SMART: protein-tyrosine phosphatase, low molecular weight; KEGG: dac:Daci_0489 protein tyrosine phosphatase; protein-tyrosine phosphatase, low molecular weight complement(688519..689016) Ralstonia pickettii 12D 8018278 YP_002980626.1 CDS Rpic12D_0653 NC_012856.1 689029 689472 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dac:Daci_0488 glyoxalase/bleomycin resistance protein/dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(689029..689472) Ralstonia pickettii 12D 8018279 YP_002980627.1 CDS Rpic12D_0654 NC_012856.1 689484 689813 R SMART: regulatory protein ArsR; KEGG: mpt:Mpe_A2347 ArsR family transcriptional regulator; putative ArsR family transcriptional regulator complement(689484..689813) Ralstonia pickettii 12D 8018280 YP_002980628.1 CDS Rpic12D_0655 NC_012856.1 690143 690394 D KEGG: aav:Aave_0554 hypothetical protein; hypothetical protein 690143..690394 Ralstonia pickettii 12D 8018281 YP_002980629.1 CDS Rpic12D_0656 NC_012856.1 690420 690812 D KEGG: mpt:Mpe_A2349 hypothetical protein; hypothetical protein 690420..690812 Ralstonia pickettii 12D 8018282 YP_002980630.1 CDS Rpic12D_0657 NC_012856.1 690990 691709 D KEGG: bpt:Bpet1047 hypothetical protein; hypothetical protein 690990..691709 Ralstonia pickettii 12D 8018283 YP_002980631.1 CDS Rpic12D_0658 NC_012856.1 691789 692505 D KEGG: ajs:Ajs_2229 hypothetical protein; hypothetical protein 691789..692505 Ralstonia pickettii 12D 8018284 YP_002980632.1 CDS Rpic12D_0659 NC_012856.1 692798 693595 D KEGG: ajs:Ajs_2228 hypothetical protein; hypothetical protein 692798..693595 Ralstonia pickettii 12D 8018285 YP_002980633.1 CDS Rpic12D_0660 NC_012856.1 693672 694037 D KEGG: ajs:Ajs_2227 hypothetical protein; hypothetical protein 693672..694037 Ralstonia pickettii 12D 8018286 YP_002980634.1 CDS Rpic12D_0661 NC_012856.1 694175 695017 D KEGG: bpt:Bpet1466 hypothetical protein; hypothetical protein 694175..695017 Ralstonia pickettii 12D 8018287 YP_002980635.1 CDS Rpic12D_0662 NC_012856.1 695336 695890 D KEGG: mpt:Mpe_A2362 hypothetical protein; hypothetical protein 695336..695890 Ralstonia pickettii 12D 8018288 YP_002980636.1 CDS Rpic12D_0663 NC_012856.1 696002 696631 D KEGG: eba:ebA2436 hypothetical protein; hypothetical protein 696002..696631 Ralstonia pickettii 12D 8018289 YP_002980637.1 CDS Rpic12D_0664 NC_012856.1 696725 697552 D PFAM: protein of unknown function DUF932; KEGG: bpt:Bpet1317 hypothetical protein; hypothetical protein 696725..697552 Ralstonia pickettii 12D 8018290 YP_002980638.1 CDS Rpic12D_0665 NC_012856.1 697860 698516 D KEGG: eba:ebA2434 hypothetical protein; hypothetical protein 697860..698516 Ralstonia pickettii 12D 8018291 YP_002980639.1 CDS Rpic12D_0666 NC_012856.1 698584 699702 D KEGG: mpt:Mpe_A2366 hypothetical protein; hypothetical protein 698584..699702 Ralstonia pickettii 12D 8018292 YP_002980640.1 CDS Rpic12D_0667 NC_012856.1 699835 702117 D SMART: DEAD-like helicases; KEGG: mpt:Mpe_A2368 plasmid-related protein; DEAD/DEAH box helicase 699835..702117 Ralstonia pickettii 12D 8018293 YP_002980641.1 CDS Rpic12D_0668 NC_012856.1 702265 702861 D KEGG: mpt:Mpe_A2375 hypothetical protein; hypothetical protein 702265..702861 Ralstonia pickettii 12D 8018294 YP_002980642.1 CDS Rpic12D_0669 NC_012856.1 702858 703502 D KEGG: mpt:Mpe_A2376 hypothetical protein; hypothetical protein 702858..703502 Ralstonia pickettii 12D 8018295 YP_002980643.1 CDS Rpic12D_0670 NC_012856.1 703512 704234 D KEGG: ajs:Ajs_2211 secreted protein; hypothetical protein 703512..704234 Ralstonia pickettii 12D 8018296 YP_002980644.1 CDS Rpic12D_0671 NC_012856.1 704219 704803 D PFAM: Lytic transglycosylase catalytic; KEGG: mpt:Mpe_A2378 hypothetical protein; lytic transglycosylase catalytic subunit 704219..704803 Ralstonia pickettii 12D 8018297 YP_002980645.1 CDS Rpic12D_0672 NC_012856.1 704800 705354 D KEGG: eba:ebA2423 hypothetical protein; hypothetical protein 704800..705354 Ralstonia pickettii 12D 8018298 YP_002980646.1 CDS Rpic12D_0673 NC_012856.1 705383 707542 D KEGG: mpt:Mpe_A2380 hypothetical protein; hypothetical protein 705383..707542 Ralstonia pickettii 12D 8018299 YP_002980647.1 CDS Rpic12D_0674 NC_012856.1 707539 708288 D KEGG: mpt:Mpe_A2381 hypothetical protein; hypothetical protein 707539..708288 Ralstonia pickettii 12D 8018300 YP_002980648.1 CDS Rpic12D_0675 NC_012856.1 708403 708789 D KEGG: ajs:Ajs_2194 hypothetical protein; hypothetical protein 708403..708789 Ralstonia pickettii 12D 8018301 YP_002980649.1 CDS Rpic12D_0676 NC_012856.1 708786 709025 D KEGG: mpt:Mpe_A2387 hypothetical protein; hypothetical protein 708786..709025 Ralstonia pickettii 12D 8018302 YP_002980650.1 CDS Rpic12D_0677 NC_012856.1 709049 709414 D KEGG: eba:ebB70 hypothetical protein; hypothetical protein 709049..709414 Ralstonia pickettii 12D 8018303 YP_002980651.1 CDS Rpic12D_0678 NC_012856.1 709427 709855 D KEGG: eba:ebB69 hypothetical protein; hypothetical protein 709427..709855 Ralstonia pickettii 12D 8018304 YP_002980652.1 CDS Rpic12D_0679 NC_012856.1 709852 710544 D KEGG: mpt:Mpe_A2390 hypothetical protein; hypothetical protein 709852..710544 Ralstonia pickettii 12D 8018305 YP_002980653.1 CDS Rpic12D_0680 NC_012856.1 710541 711458 D KEGG: eba:ebA2409 hypothetical protein; hypothetical protein 710541..711458 Ralstonia pickettii 12D 8018306 YP_002980654.1 CDS Rpic12D_0681 NC_012856.1 711448 712917 D KEGG: eba:ebA2408 hypothetical protein; hypothetical protein 711448..712917 Ralstonia pickettii 12D 8018307 YP_002980655.1 CDS Rpic12D_0682 NC_012856.1 712898 713332 D KEGG: eba:ebA2407 hypothetical protein; hypothetical protein 712898..713332 Ralstonia pickettii 12D 8018308 YP_002980656.1 CDS Rpic12D_0683 NC_012856.1 713332 716214 D KEGG: ajs:Ajs_2186 hypothetical protein; hypothetical protein 713332..716214 Ralstonia pickettii 12D 8018309 YP_002980657.1 CDS Rpic12D_0684 NC_012856.1 716228 716974 D PFAM: DSBA oxidoreductase; KEGG: mpt:Mpe_A2395 hypothetical protein; DSBA oxidoreductase 716228..716974 Ralstonia pickettii 12D 8018310 YP_002980658.1 CDS Rpic12D_0685 NC_012856.1 717169 717663 D TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; KEGG: ajs:Ajs_2184 DNA repair protein RadC; DNA repair protein RadC 717169..717663 Ralstonia pickettii 12D 8018311 YP_002980659.1 CDS Rpic12D_0686 NC_012856.1 717821 718267 D PFAM: protein of unknown function DUF1525; KEGG: ajs:Ajs_2183 hypothetical protein; hypothetical protein 717821..718267 Ralstonia pickettii 12D 8018312 YP_002980660.1 CDS Rpic12D_0687 NC_012856.1 718264 719214 D PFAM: protein of unknown function DUF1527; KEGG: eba:ebA2511 hypothetical protein; hypothetical protein 718264..719214 Ralstonia pickettii 12D 8018313 YP_002980661.1 CDS Rpic12D_0688 NC_012856.1 719224 720627 D KEGG: eba:ebA2397 hypothetical protein; hypothetical protein 719224..720627 Ralstonia pickettii 12D 8018314 YP_002980662.1 CDS Rpic12D_0689 NC_012856.1 720624 720977 D KEGG: eba:ebA2396 hypothetical protein; hypothetical protein 720624..720977 Ralstonia pickettii 12D 8018315 YP_002980663.1 CDS Rpic12D_0690 NC_012856.1 720993 722510 D KEGG: eba:ebA2395 hypothetical protein; hypothetical protein 720993..722510 Ralstonia pickettii 12D 8018316 YP_002980664.1 CDS Rpic12D_0691 NC_012856.1 722516 722887 R KEGG: eba:ebB78 hypothetical protein; hypothetical protein complement(722516..722887) Ralstonia pickettii 12D 8018317 YP_002980665.1 CDS Rpic12D_0692 NC_012856.1 722974 723438 R KEGG: pla:Plav_3433 hypothetical protein; hypothetical protein complement(722974..723438) Ralstonia pickettii 12D 8018318 YP_002980666.1 CDS Rpic12D_0693 NC_012856.1 723438 723755 R TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: pla:Plav_3434 AbrB family transcriptional regulator; AbrB family transcriptional regulator complement(723438..723755) Ralstonia pickettii 12D 8018319 YP_002980667.1 CDS Rpic12D_0694 NC_012856.1 724069 725916 D PFAM: Relaxase; protein of unknown function DUF1528; KEGG: mpt:Mpe_A2405 hypothetical protein; Relaxase 724069..725916 Ralstonia pickettii 12D 8018320 YP_002980668.1 CDS Rpic12D_0695 NC_012856.1 725943 726248 R PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: mpt:Mpe_A2406 hypothetical protein; XRE family transcriptional regulator complement(725943..726248) Ralstonia pickettii 12D 8018321 YP_002980669.1 CDS Rpic12D_0696 NC_012856.1 726353 726979 D PFAM: LysR substrate-binding; KEGG: eba:ebA2490 transcriptional regulator; LysR family transcriptional regulator 726353..726979 Ralstonia pickettii 12D 8018322 YP_002980670.1 CDS Rpic12D_0697 NC_012856.1 727012 728868 R PFAM: integrase family protein; KEGG: ajs:Ajs_1977 phage integrase family protein; integrase family protein complement(727012..728868) Ralstonia pickettii 12D 8018323 YP_002980671.1 CDS Rpic12D_0698 NC_012856.1 729239 729952 R KEGG: rso:RSc0707 hypothetical protein; hypothetical protein complement(729239..729952) Ralstonia pickettii 12D 8018325 YP_002980672.1 CDS Rpic12D_0699 NC_012856.1 730083 732137 R AcsA; in Sinorhizobium meliloti this enzyme is required for acetoacetate activation; similar to acetyl-CoA synthase; acetoacetyl-CoA synthetase complement(730083..732137) Ralstonia pickettii 12D 8018326 YP_002980673.1 CDS Rpic12D_0700 NC_012856.1 732218 733729 R TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde Dehydrogenase; KEGG: mms:mma_2905 succinate-semialdehyde dehydrogenase (NADP+); succinate-semialdehyde dehydrogenase complement(732218..733729) Ralstonia pickettii 12D 8018327 YP_002980674.1 CDS Rpic12D_0701 NC_012856.1 733859 735370 R TIGRFAM: UbiD family decarboxylase; PFAM: carboxylyase-related protein; KEGG: rso:RSc0708 hypothetical protein; UbiD family decarboxylase complement(733859..735370) Ralstonia pickettii 12D 8018328 YP_002980675.1 CDS Rpic12D_0702 NC_012856.1 735908 737092 D PFAM: Lytic transglycosylase catalytic; KEGG: rso:RSc0709 hypothetical protein; lytic transglycosylase catalytic subunit 735908..737092 Ralstonia pickettii 12D 8018329 YP_002980676.1 CDS Rpic12D_0703 NC_012856.1 737170 738354 R PFAM: aminotransferase class I and II; KEGG: rso:RSc0710 aminotransferase; aminotransferase complement(737170..738354) Ralstonia pickettii 12D 8018330 YP_002980677.1 CDS nusB NC_012856.1 738398 738865 R Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB complement(738398..738865) Ralstonia pickettii 12D 8018331 YP_002980678.1 CDS ribH NC_012856.1 738893 739393 R RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase complement(738893..739393) Ralstonia pickettii 12D 8018332 YP_002980679.1 CDS Rpic12D_0706 NC_012856.1 739475 740614 R bifunctional enzyme DHBP synthase/GTP cyclohydrolase II-like protein; functions in riboflavin synthesis; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein complement(739475..740614) Ralstonia pickettii 12D 8018333 YP_002980680.1 CDS Rpic12D_0707 NC_012856.1 740742 741395 R catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha complement(740742..741395) Ralstonia pickettii 12D 8018334 YP_002980681.1 CDS Rpic12D_0708 NC_012856.1 741402 742514 R KEGG: rso:RSc0715 diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding; riboflavin biosynthesis protein RibD complement(741402..742514) Ralstonia pickettii 12D 8018335 YP_002980682.1 CDS Rpic12D_0709 NC_012856.1 742538 743110 R KEGG: rso:RSc0716 type 4 fimbrial pilin related transmembrane protein; type 4 fimbrial pilin related transmembrane protein complement(742538..743110) Ralstonia pickettii 12D 8018336 YP_002980683.1 CDS Rpic12D_0710 NC_012856.1 743107 743511 R KEGG: rso:RSc0717 type-4 frimbrial pilin-related signal peptide protein; type-4 frimbrial pilin-like signal peptide protein complement(743107..743511) Ralstonia pickettii 12D 8018337 YP_002980684.1 CDS Rpic12D_0711 NC_012856.1 743508 744299 R KEGG: rso:RSc0719 signal peptide protein; Tfp pilus assembly protein PilX-like protein complement(743508..744299) Ralstonia pickettii 12D 8018338 YP_002980685.1 CDS Rpic12D_0712 NC_012856.1 744293 745225 R KEGG: rso:RSc0720 hypothetical protein; hypothetical protein complement(744293..745225) Ralstonia pickettii 12D 8018339 YP_002980686.1 CDS Rpic12D_0713 NC_012856.1 745870 746514 D KEGG: xfm:Xfasm12_1769 fimbrial protein FimT; Tfp pilus assembly protein FimT-like protein 745870..746514 Ralstonia pickettii 12D 8018340 YP_002980687.1 CDS Rpic12D_0714 NC_012856.1 746511 747014 D TIGRFAM: type IV pilus modification protein PilV; KEGG: cvi:CV_0479 type-4 fimbrial biogenesis protein; type IV pilus modification protein PilV 746511..747014 Ralstonia pickettii 12D 8018341 YP_002980688.1 CDS Rpic12D_0715 NC_012856.1 747011 748045 D KEGG: noc:Noc_2272 type IV pilus assembly protein PilW; type IV pilus assembly protein PilW 747011..748045 Ralstonia pickettii 12D 8018342 YP_002980689.1 CDS Rpic12D_0716 NC_012856.1 748045 748611 D KEGG: pca:Pcar_2156 Tfp pilus assembly protein PilX; Tfp pilus assembly protein PilX 748045..748611 Ralstonia pickettii 12D 8018343 YP_002980690.1 CDS Rpic12D_0717 NC_012856.1 748616 751984 D KEGG: noc:Noc_2274 fimbrial assembly protein; Tfp pilus assembly protein tip-associated adhesin PilY1-like protein 748616..751984 Ralstonia pickettii 12D 8018344 YP_002980691.1 CDS Rpic12D_0718 NC_012856.1 751996 752355 D hypothetical protein 751996..752355 Ralstonia pickettii 12D 8018345 YP_002980692.1 CDS Rpic12D_0719 NC_012856.1 752352 752786 D KEGG: xoo:XOO3195 type IV pilin; type IV pilin 752352..752786 Ralstonia pickettii 12D 8018346 YP_002980693.1 CDS Rpic12D_0720 NC_012856.1 752879 754129 R PFAM: transposase mutator type; KEGG: rso:RSp0478 ISRSO7-transposase protein; transposase mutator type complement(752879..754129) Ralstonia pickettii 12D 8018347 YP_002980694.1 CDS nrdR NC_012856.1 754184 754648 R PFAM: ATP-cone domain protein; KEGG: rso:RSc0728 transcriptional regulator NrdR; NrdR family transcriptional regulator complement(754184..754648) Ralstonia pickettii 12D 8018348 YP_002980695.1 CDS glyA NC_012856.1 754783 756093 R catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase complement(754783..756093) Ralstonia pickettii 12D 8018349 YP_002980696.1 CDS Rpic12D_0723 NC_012856.1 756432 757184 D PFAM: short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: rso:RSc0730 oxidoreductase protein; short-chain dehydrogenase/reductase SDR 756432..757184 Ralstonia pickettii 12D 8018350 YP_002980697.1 CDS Rpic12D_0724 NC_012856.1 757254 757658 D TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: rso:RSc0731 thioesterase protein; tol-pal system-associated acyl-CoA thioesterase 757254..757658 Ralstonia pickettii 12D 8018351 YP_002980698.1 CDS Rpic12D_0725 NC_012856.1 757655 758347 D TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: rso:RSc0732 TolQ-like transport transmembrane protein; protein TolQ 757655..758347 Ralstonia pickettii 12D 8018352 YP_002980699.1 CDS Rpic12D_0726 NC_012856.1 758360 758794 D TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: rso:RSc0733 TolR-related transport transmembrane protein; protein TolR 758360..758794 Ralstonia pickettii 12D 8018353 YP_002980700.1 CDS Rpic12D_0727 NC_012856.1 758847 759875 D TIGRFAM: protein TolA; TonB family protein; PFAM: Tol-Pal system TolA; KEGG: rso:RSc0734 TolA-like transport transmembrane protein; protein TolA 758847..759875 Ralstonia pickettii 12D 8018354 YP_002980701.1 CDS tolB NC_012856.1 759942 761246 D forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 759942..761246 Ralstonia pickettii 12D 8018355 YP_002980702.1 CDS Rpic12D_0729 NC_012856.1 761276 761797 D TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: rso:RSc0736 peptidoglycan-associated lipoprotein precursor; peptidoglycan-associated lipoprotein 761276..761797 Ralstonia pickettii 12D 8018356 YP_002980703.1 CDS Rpic12D_0730 NC_012856.1 761866 762651 D TIGRFAM: tol-pal system protein YbgF; KEGG: rso:RSc0737 hypothetical protein; tol-pal system protein YbgF 761866..762651 Ralstonia pickettii 12D 8018357 YP_002980704.1 CDS Rpic12D_0731 NC_012856.1 762815 763489 D TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: rso:RSc0738 signal peptide protein; exsB protein 762815..763489 Ralstonia pickettii 12D 8018358 YP_002980705.1 CDS Rpic12D_0732 NC_012856.1 763496 764611 D PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: rso:RSc0739 hypothetical protein; hypothetical protein 763496..764611 Ralstonia pickettii 12D 8018359 YP_002980706.1 CDS Rpic12D_0733 NC_012856.1 766719 767234 D KEGG: bvi:Bcep1808_2268 hypothetical protein; hypothetical protein 766719..767234 Ralstonia pickettii 12D 8018361 YP_002980707.1 CDS Rpic12D_0734 NC_012856.1 767371 767586 D hypothetical protein 767371..767586 Ralstonia pickettii 12D 8018362 YP_002980708.1 CDS Rpic12D_0735 NC_012856.1 767657 768097 R hypothetical protein complement(767657..768097) Ralstonia pickettii 12D 8018363 YP_002980709.1 CDS Rpic12D_0736 NC_012856.1 768235 769530 D PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: ajs:Ajs_2101 transposase, IS204/IS1001/IS1096/IS1165 family protein; transposase IS204/IS1001/IS1096/IS1165 family protein 768235..769530 Ralstonia pickettii 12D 8018364 YP_002980710.1 CDS Rpic12D_0737 NC_012856.1 770223 770738 D KEGG: bvi:Bcep1808_2268 hypothetical protein; hypothetical protein 770223..770738 Ralstonia pickettii 12D 8018365 YP_002980711.1 CDS Rpic12D_0738 NC_012856.1 771323 771691 D hypothetical protein 771323..771691 Ralstonia pickettii 12D 8018366 YP_002980712.1 CDS Rpic12D_0739 NC_012856.1 771705 772034 D PFAM: transposase IS3/IS911 family protein; KEGG: rme:Rmet_6068 transposase IS3/IS911; transposase IS3/IS911 family protein 771705..772034 Ralstonia pickettii 12D 8018367 YP_002980713.1 CDS Rpic12D_0740 NC_012856.1 772088 772945 D PFAM: integrase catalytic region; KEGG: fgenesh4_pg.C_scaffold_13109000001.; Integrase catalytic subunit 772088..772945 Ralstonia pickettii 12D 8018368 YP_002980714.1 CDS Rpic12D_0741 NC_012856.1 773250 773519 D hypothetical protein 773250..773519 Ralstonia pickettii 12D 8018369 YP_002980715.1 CDS Rpic12D_0742 NC_012856.1 773591 774256 D KEGG: bph:Bphy_1899 metallophosphoesterase; hypothetical protein 773591..774256 Ralstonia pickettii 12D 8018370 YP_002980716.1 CDS Rpic12D_0743 NC_012856.1 774384 775526 R KEGG: mba:Mbar_A2778 H(+)-transporting ATPase; hypothetical protein complement(774384..775526) Ralstonia pickettii 12D 8018371 YP_002980717.1 CDS Rpic12D_0744 NC_012856.1 775882 776052 R hypothetical protein complement(775882..776052) Ralstonia pickettii 12D 8018372 YP_002980718.1 CDS Rpic12D_0745 NC_012856.1 776119 777072 R KEGG: bvi:Bcep1808_2268 hypothetical protein; hypothetical protein complement(776119..777072) Ralstonia pickettii 12D 8018373 YP_002980719.1 CDS Rpic12D_0746 NC_012856.1 777122 777343 R hypothetical protein complement(777122..777343) Ralstonia pickettii 12D 8018374 YP_002980720.1 CDS Rpic12D_0747 NC_012856.1 777398 778051 R hypothetical protein complement(777398..778051) Ralstonia pickettii 12D 8018375 YP_002980721.1 CDS Rpic12D_0748 NC_012856.1 778078 778893 R hypothetical protein complement(778078..778893) Ralstonia pickettii 12D 8018376 YP_002980722.1 CDS Rpic12D_0749 NC_012856.1 779111 780325 R KEGG: hypothetical protein; hypothetical protein complement(779111..780325) Ralstonia pickettii 12D 8018377 YP_002980723.1 CDS Rpic12D_0750 NC_012856.1 780435 781391 R KEGG: bvi:Bcep1808_7562 hypothetical protein; hypothetical protein complement(780435..781391) Ralstonia pickettii 12D 8018378 YP_002980724.1 CDS Rpic12D_0751 NC_012856.1 781528 781842 R hypothetical protein complement(781528..781842) Ralstonia pickettii 12D 8018379 YP_002980725.1 CDS Rpic12D_0752 NC_012856.1 781987 783426 R PFAM: peptidase C14 caspase catalytic subunit p20; Sel1 domain protein repeat-containing protein; KEGG: bvi:Bcep1808_2031 peptidase C14, caspase catalytic subunit P20; peptidase C14 caspase catalytic subunit p20 complement(781987..783426) Ralstonia pickettii 12D 8018380 YP_002980726.1 CDS Rpic12D_0753 NC_012856.1 783435 784076 R hypothetical protein complement(783435..784076) Ralstonia pickettii 12D 8018381 YP_002980727.1 CDS Rpic12D_0754 NC_012856.1 784069 784749 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; KEGG: rde:RD1_3999 RNA polymerase ECF-type sigma factor; ECF subfamily RNA polymerase sigma-24 subunit complement(784069..784749) Ralstonia pickettii 12D 8018382 YP_002980728.1 CDS Rpic12D_0755 NC_012856.1 785809 786579 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: bmj:BMULJ_01717 hypothetical protein; xylose isomerase domain-containing protein TIM barrel 785809..786579 Ralstonia pickettii 12D 8018384 YP_002980729.1 CDS Rpic12D_0756 NC_012856.1 786609 787598 D PFAM: PfkB domain protein; KEGG: bur:Bcep18194_A5029 ribokinase family sugar kinase; PfkB domain-containing protein 786609..787598 Ralstonia pickettii 12D 8018385 YP_002980730.1 CDS Rpic12D_0757 NC_012856.1 787657 788937 D PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: bmj:BMULJ_01715 permease of the major facilitator superfamily; major facilitator superfamily protein 787657..788937 Ralstonia pickettii 12D 8018386 YP_002980731.1 CDS Rpic12D_0758 NC_012856.1 788942 789916 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: bmj:BMULJ_01714 gluconate 2-dehydrogenase; gluconate 2-dehydrogenase 788942..789916 Ralstonia pickettii 12D 8018387 YP_002980732.1 CDS Rpic12D_0759 NC_012856.1 789996 791060 D PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: bch:Bcen2424_1729 LacI family transcription regulator; LacI family transcriptional regulator 789996..791060 Ralstonia pickettii 12D 8018388 YP_002980733.1 CDS Rpic12D_0760 NC_012856.1 791057 791542 D PFAM: nucleoside 2-deoxyribosyltransferase; KEGG: rso:RSc0745 hypothetical protein; nucleoside 2-deoxyribosyltransferase 791057..791542 Ralstonia pickettii 12D 8018389 YP_002980734.1 CDS Rpic12D_0761 NC_012856.1 791644 792816 D PFAM: Acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase domain protein; KEGG: bpl:BURPS1106A_A0453 acyl-CoA dehydrogenase domain-containing protein; acyl-CoA dehydrogenase type 2 domain-containing protein 791644..792816 Ralstonia pickettii 12D 8018390 YP_002980735.1 CDS Rpic12D_0762 NC_012856.1 792906 793808 D PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: rso:RSc0746 alpha-ketoglutarate-dependent taurine dioxygenase oxidoreductase protein; taurine dioxygenase 792906..793808 Ralstonia pickettii 12D 8018391 YP_002980736.1 CDS Rpic12D_0763 NC_012856.1 793820 794281 R PFAM: NUDIX hydrolase; KEGG: rso:RSc0747 hypothetical protein; NUDIX hydrolase complement(793820..794281) Ralstonia pickettii 12D 8018392 YP_002980737.1 CDS Rpic12D_0764 NC_012856.1 794283 795092 R PFAM: conserved hypothetical protein; KEGG: rso:RSc0748 hypothetical protein; hypothetical protein complement(794283..795092) Ralstonia pickettii 12D 8018393 YP_002980738.1 CDS Rpic12D_0765 NC_012856.1 795089 795763 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RSc0749 ABC transporter ATP-binding protein; ABC transporter complement(795089..795763) Ralstonia pickettii 12D 8018394 YP_002980739.1 CDS Rpic12D_0766 NC_012856.1 796074 796439 D KEGG: rso:RSc0750 hypothetical protein; hypothetical protein 796074..796439 Ralstonia pickettii 12D 8018395 YP_002980740.1 CDS Rpic12D_0767 NC_012856.1 796501 797028 R KEGG: rso:RSc0751 hypothetical protein; hypothetical protein complement(796501..797028) Ralstonia pickettii 12D 8018396 YP_002980741.1 CDS Rpic12D_0768 NC_012856.1 797025 797402 R KEGG: rso:RSc0752 hypothetical protein; hypothetical protein complement(797025..797402) Ralstonia pickettii 12D 8018397 YP_002980742.1 CDS Rpic12D_0769 NC_012856.1 797543 797935 R PFAM: protein of unknown function DUF883 ElaB; KEGG: rso:RSc0753 hypothetical protein; hypothetical protein complement(797543..797935) Ralstonia pickettii 12D 8018398 YP_002980743.1 CDS Rpic12D_0770 NC_012856.1 798152 798790 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rso:RSc0754 antioxidant oxidoreductase protein; peroxidase 798152..798790 Ralstonia pickettii 12D 8018399 YP_002980744.1 CDS Rpic12D_0771 NC_012856.1 798922 800304 R PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: rso:RSc0755 hypothetical protein; xanthine/uracil/vitamin C permease complement(798922..800304) Ralstonia pickettii 12D 8018400 YP_002980745.1 CDS Rpic12D_0772 NC_012856.1 800715 801908 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rso:RSc0756 glutaryl-CoA dehydrogenase oxidoreductase; acyl-CoA dehydrogenase domain-containing protein complement(800715..801908) Ralstonia pickettii 12D 8018401 YP_002980746.1 CDS Rpic12D_0773 NC_012856.1 802012 802839 D PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: rso:RSc0757 transcription regulator protein; IclR family transcriptional regulator 802012..802839 Ralstonia pickettii 12D 8018402 YP_002980747.1 CDS Rpic12D_0774 NC_012856.1 803126 804001 R TIGRFAM: tryptophan 2,3-dioxygenase; PFAM: tryptophan 23-dioxygenase; KEGG: rso:RSc0758 oxygenase oxidoreductase protein; tryptophan 2,3-dioxygenase complement(803126..804001) Ralstonia pickettii 12D 8018403 YP_002980748.1 CDS Rpic12D_0775 NC_012856.1 804003 805256 R TIGRFAM: kynureninase; PFAM: aminotransferase class V; KEGG: rso:RSc0759 hydrolase protein; kynureninase complement(804003..805256) Ralstonia pickettii 12D 8018404 YP_002980749.1 CDS Rpic12D_0776 NC_012856.1 805302 805931 R TIGRFAM: arylformamidase; PFAM: cyclase family protein; KEGG: rso:RSc0760 hypothetical protein; arylformamidase complement(805302..805931) Ralstonia pickettii 12D 8018405 YP_002980750.1 CDS Rpic12D_0777 NC_012856.1 806080 806607 D PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: rso:RSc0761 transcription regulator protein; AsnC family transcriptional regulator 806080..806607 Ralstonia pickettii 12D 8018406 YP_002980751.1 CDS Rpic12D_0778 NC_012856.1 806696 806902 D KEGG: rso:RSc0762 hypothetical protein; hypothetical protein 806696..806902 Ralstonia pickettii 12D 8018407 YP_002980752.1 CDS Rpic12D_0779 NC_012856.1 806916 807494 R PFAM: flavin reductase domain protein FMN-binding; KEGG: rso:RSc0763 monooxygenase oxidoreductase protein; flavin reductase domain-containing protein complement(806916..807494) Ralstonia pickettii 12D 8018408 YP_002980753.1 CDS Rpic12D_0780 NC_012856.1 808118 808564 R PFAM: transcriptional regulator TrmB; KEGG: cyt:cce_5301 hypothetical protein; TrmB family transcriptional regulator complement(808118..808564) Ralstonia pickettii 12D 8018409 YP_002980754.1 CDS Rpic12D_0781 NC_012856.1 808853 810343 R PFAM: Relaxase/mobilization nuclease family protein; KEGG: mms:mma_2529 hypothetical protein; relaxase/mobilization nuclease complement(808853..810343) Ralstonia pickettii 12D 8018410 YP_002980755.1 CDS Rpic12D_0782 NC_012856.1 810340 810663 R PFAM: mobilisation protein; KEGG: mms:mma_2528 hypothetical protein; mobilisation protein complement(810340..810663) Ralstonia pickettii 12D 8018411 YP_002980756.1 CDS Rpic12D_0783 NC_012856.1 810961 812358 R PFAM: integrase family protein; KEGG: bvi:Bcep1808_2666 phage integrase family protein; integrase family protein complement(810961..812358) Ralstonia pickettii 12D 8018412 YP_002980757.1 CDS Rpic12D_0784 NC_012856.1 812454 813041 D this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 812454..813041 Ralstonia pickettii 12D 8018413 YP_002980758.1 CDS Rpic12D_0785 NC_012856.1 813057 814142 R PFAM: protein of unknown function DUF72; KEGG: rso:RSc0765 hypothetical protein; hypothetical protein complement(813057..814142) Ralstonia pickettii 12D 8018414 YP_002980759.1 CDS Rpic12D_0786 NC_012856.1 814147 815367 R PFAM: cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rso:RSc0766 cyclopropane-fatty-acyl-phospholipid synthase protein; cyclopropane-fatty-acyl-phospholipid synthase complement(814147..815367) Ralstonia pickettii 12D 8018415 YP_002980760.1 CDS Rpic12D_0787 NC_012856.1 815566 816204 R catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; pyridoxamine 5'-phosphate oxidase complement(815566..816204) Ralstonia pickettii 12D 8018416 YP_002980761.1 CDS Rpic12D_0788 NC_012856.1 816410 816895 D KEGG: rso:RSc0770 transmembrane dehydrogenase (small subunit) oxidoreductase protein; transmembrane dehydrogenase (small subunit) oxidoreductase protein 816410..816895 Ralstonia pickettii 12D 8018417 YP_002980762.1 CDS Rpic12D_0789 NC_012856.1 816895 818517 D PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; KEGG: rso:RSc0771 transmembrane dehydrogenase (large subunit) oxidoreductase protein; glucose-methanol-choline oxidoreductase 816895..818517 Ralstonia pickettii 12D 8018418 YP_002980763.1 CDS Rpic12D_0790 NC_012856.1 818519 819802 D PFAM: cytochrome C class I; KEGG: rso:RSc0772 oxidoreductase dehydrogenase (cytochrome C subunit) signal peptide protein; gluconate 2-dehydrogenase 818519..819802 Ralstonia pickettii 12D 8018419 YP_002980764.1 CDS Rpic12D_0791 NC_012856.1 819825 822122 R PFAM: AsmA family protein; KEGG: rso:RSc0773 hypothetical protein; AsmA family protein complement(819825..822122) Ralstonia pickettii 12D 8018420 YP_002980765.1 CDS Rpic12D_0792 NC_012856.1 822204 823106 D PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: rso:RSc0774 hypothetical protein; UBA/THIF-type NAD/FAD binding protein 822204..823106 Ralstonia pickettii 12D 8018421 YP_002980766.1 CDS Rpic12D_0793 NC_012856.1 823074 823442 R PFAM: Thioredoxin domain; KEGG: bvi:Bcep1808_2659 thioredoxin; thioredoxin domain-containing protein complement(823074..823442) Ralstonia pickettii 12D 8018422 YP_002980767.1 CDS Rpic12D_0794 NC_012856.1 823540 823956 R TIGRFAM: hemerythrin-like metal-binding protein; PFAM: hemerythrin HHE cation-binding protein; KEGG: rso:RSc0777 hypothetical protein; cation-binding hemerythrin HHE family protein complement(823540..823956) Ralstonia pickettii 12D 8018423 YP_002980768.1 CDS Rpic12D_0795 NC_012856.1 824038 824703 R PFAM: DSBA oxidoreductase; KEGG: rso:RSc0778 hypothetical protein; DSBA oxidoreductase complement(824038..824703) Ralstonia pickettii 12D 8018424 YP_002980769.1 CDS Rpic12D_0796 NC_012856.1 824714 825559 R KEGG: rso:RSc0779 thioredoxin protein; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; thioredoxin complement(824714..825559) Ralstonia pickettii 12D 8018425 YP_002980770.1 CDS Rpic12D_0797 NC_012856.1 825768 827474 D activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 825768..827474 Ralstonia pickettii 12D 8018426 YP_002980771.1 CDS Rpic12D_0798 NC_012856.1 827514 828308 R KEGG: rso:RSc0781 aankyrin repeat-containing protein; ankyrin complement(827514..828308) Ralstonia pickettii 12D 8018427 YP_002980772.1 CDS Rpic12D_0799 NC_012856.1 828320 829069 R PFAM: ChaC family protein; KEGG: rso:RSc0782 hypothetical protein; ChaC family protein complement(828320..829069) Ralstonia pickettii 12D 8018428 YP_002980773.1 CDS Rpic12D_0800 NC_012856.1 829345 829698 R PFAM: peptidylprolyl isomerase FKBP-type; KEGG: rso:RSc0784 FKBP-type peptidyl-prolyl cis-trans isomerase; FKBP-type peptidylprolyl isomerase complement(829345..829698) Ralstonia pickettii 12D 8018430 YP_002980774.1 CDS Rpic12D_0801 NC_012856.1 829740 830291 R PFAM: YaeQ family protein; KEGG: rso:RSc0785 hypothetical protein; YaeQ family protein complement(829740..830291) Ralstonia pickettii 12D 8018431 YP_002980775.1 CDS Rpic12D_0802 NC_012856.1 830464 833337 D KEGG: rso:RSc0786 hypothetical protein; hypothetical protein 830464..833337 Ralstonia pickettii 12D 8018432 YP_002980776.1 CDS Rpic12D_0803 NC_012856.1 833334 834656 D KEGG: rso:RSc0787 hypothetical protein; hypothetical protein 833334..834656 Ralstonia pickettii 12D 8018433 YP_002980777.1 CDS Rpic12D_0804 NC_012856.1 834719 835102 R KEGG: rso:RSc0788 hypothetical protein; hypothetical protein complement(834719..835102) Ralstonia pickettii 12D 8018434 YP_002980778.1 CDS Rpic12D_0805 NC_012856.1 835179 835400 R KEGG: rso:RSc0789 hypothetical protein; hypothetical protein complement(835179..835400) Ralstonia pickettii 12D 8018435 YP_002980779.1 CDS Rpic12D_0806 NC_012856.1 835417 835980 R PFAM: YceI family protein; KEGG: rso:RSc0790 signal peptide protein; hypothetical protein complement(835417..835980) Ralstonia pickettii 12D 8018436 YP_002980780.1 CDS Rpic12D_0807 NC_012856.1 836026 837756 R catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase complement(836026..837756) Ralstonia pickettii 12D 8018437 YP_002980781.1 CDS Rpic12D_0808 NC_012856.1 837819 838841 R PFAM: lipase chaperone; KEGG: rme:Rmet_3795 lipase chaperone; lipase chaperone complement(837819..838841) Ralstonia pickettii 12D 8018438 YP_002980782.1 CDS Rpic12D_0809 NC_012856.1 838902 839900 R PFAM: alpha/beta hydrolase fold; protein of unknown function DUF676 hydrolase domain protein; PGAP1 family protein; KEGG: bte:BTH_II0639 lipase; triacylglycerol lipase complement(838902..839900) Ralstonia pickettii 12D 8018439 YP_002980783.1 CDS Rpic12D_0810 NC_012856.1 840092 841594 R PFAM: protein of unknown function DUF112 transmembrane; KEGG: rso:RSc0793 hypothetical protein; hypothetical protein complement(840092..841594) Ralstonia pickettii 12D 8018440 YP_002980784.1 CDS Rpic12D_0811 NC_012856.1 841614 842099 R PFAM: protein of unknown function DUF1468; KEGG: rso:RSc0794 hypothetical protein; hypothetical protein complement(841614..842099) Ralstonia pickettii 12D 8018441 YP_002980785.1 CDS Rpic12D_0812 NC_012856.1 842330 842782 R KEGG: rso:RSc0795 hypothetical protein; hypothetical protein complement(842330..842782) Ralstonia pickettii 12D 8018442 YP_002980786.1 CDS Rpic12D_0813 NC_012856.1 842831 844051 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rso:RSc0796 transmembrane protein; L-carnitine dehydratase/bile acid-inducible protein F complement(842831..844051) Ralstonia pickettii 12D 8018443 YP_002980787.1 CDS alaS NC_012856.1 844219 846900 D Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 844219..846900 Ralstonia pickettii 12D 8018444 YP_002980788.1 CDS Rpic12D_0815 NC_012856.1 847205 848320 D PFAM: purine nucleoside permease; KEGG: rso:RSc0798 purine nucleoside permease protein; purine nucleoside permease 847205..848320 Ralstonia pickettii 12D 8018445 YP_002980789.1 CDS Rpic12D_0816 NC_012856.1 848317 849366 D PFAM: purine nucleoside permease; KEGG: rso:RSc0799 purine nucleoside permease protein; purine nucleoside permease 848317..849366 Ralstonia pickettii 12D 8018446 YP_002980790.1 CDS Rpic12D_0817 NC_012856.1 849599 851707 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rso:RSc0800 ferrisiderophore receptor signal peptide protein; TonB-dependent siderophore receptor 849599..851707 Ralstonia pickettii 12D 8018447 YP_002980791.1 CDS Rpic12D_0818 NC_012856.1 851714 852472 R PFAM: band 7 protein; SMART: band 7 protein; KEGG: rso:RSc0802 stomatin-like transmembrane protein; hypothetical protein complement(851714..852472) Ralstonia pickettii 12D 8018448 YP_002980792.1 CDS Rpic12D_0819 NC_012856.1 852484 853872 R PFAM: protein of unknown function DUF107; KEGG: rso:RSc0803 hypothetical protein; hypothetical protein complement(852484..853872) Ralstonia pickettii 12D 8018449 YP_002980793.1 CDS Rpic12D_0820 NC_012856.1 853954 854862 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RSc0804 transcription regulator protein; LysR family transcriptional regulator complement(853954..854862) Ralstonia pickettii 12D 8018450 YP_002980794.1 CDS Rpic12D_0821 NC_012856.1 854965 856179 D PFAM: protein of unknown function DUF1228; major facilitator superfamily MFS_1; KEGG: rso:RSc0805 hypothetical protein; hypothetical protein 854965..856179 Ralstonia pickettii 12D 8018451 YP_002980795.1 CDS Rpic12D_0822 NC_012856.1 856255 857040 D PFAM: class II aldolase/adducin family protein; KEGG: rso:RSc0806 hypothetical protein; aldolase II superfamily protein 856255..857040 Ralstonia pickettii 12D 8018452 YP_002980796.1 CDS Rpic12D_0823 NC_012856.1 857096 857284 D 4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown; 4-oxalocrotonate tautomerase 857096..857284 Ralstonia pickettii 12D 8018453 YP_002980797.1 CDS Rpic12D_0824 NC_012856.1 857319 858365 D PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class V; KEGG: rso:RSc0808 low specificity L-threonine aldolase protein; threonine aldolase 857319..858365 Ralstonia pickettii 12D 8018454 YP_002980798.1 CDS Rpic12D_0825 NC_012856.1 858380 858961 D PFAM: NUDIX hydrolase; KEGG: rso:RSc0809 hypothetical protein; NUDIX hydrolase 858380..858961 Ralstonia pickettii 12D 8018455 YP_002980799.1 CDS Rpic12D_0826 NC_012856.1 859009 859236 D PFAM: SirA family protein; KEGG: rso:RSc0810 hypothetical protein; SirA family protein 859009..859236 Ralstonia pickettii 12D 8018456 YP_002980800.1 CDS Rpic12D_0827 NC_012856.1 859329 859961 R PFAM: lysine exporter protein (LYSE/YGGA); KEGG: rso:RSc0814 hypothetical protein; Lysine exporter protein LysE/YggA complement(859329..859961) Ralstonia pickettii 12D 8018457 YP_002980801.1 CDS Rpic12D_0828 NC_012856.1 860250 862706 D PFAM: endonuclease/exonuclease/phosphatase; KEGG: rme:Rmet_4989 endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 860250..862706 Ralstonia pickettii 12D 8018458 YP_002980802.1 CDS Rpic12D_0829 NC_012856.1 862916 865354 D KEGG: bcj:BCAM2757 two-component regulatory system, sensor kinase protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; Hpt domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; histidine kinase A domain protein; Hpt sensor hybrid histidine kinase 862916..865354 Ralstonia pickettii 12D 8018459 YP_002980803.1 CDS Rpic12D_0830 NC_012856.1 865694 866281 D PFAM: fimbrial protein; KEGG: pfl:PFL_3922 type I pilus biogenesis protein; fimbrial protein 865694..866281 Ralstonia pickettii 12D 8018460 YP_002980804.1 CDS Rpic12D_0831 NC_012856.1 866373 867119 D PFAM: Pilus assembly chaperone protein; Pili assembly chaperone, C-terminal; KEGG: pfo:Pfl01_3043 pili assembly chaperone; Pilus assembly chaperone protein 866373..867119 Ralstonia pickettii 12D 8018461 YP_002980805.1 CDS Rpic12D_0832 NC_012856.1 867245 869806 D PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: pfo:Pfl01_3044 fimbrial biogenesis outer membrane usher protein; fimbrial biogenesis outer membrane usher protein 867245..869806 Ralstonia pickettii 12D 8018462 YP_002980806.1 CDS Rpic12D_0833 NC_012856.1 870034 871563 R PFAM: transposase IS66; KEGG: bcm:Bcenmc03_6939 transposase IS66; transposase IS66 complement(870034..871563) Ralstonia pickettii 12D 8018463 YP_002980807.1 CDS Rpic12D_0834 NC_012856.1 871626 871916 R PFAM: IS66 Orf2 family protein; KEGG: ajs:Ajs_2917 IS66 Orf2 family protein; IS66 Orf2 family protein complement(871626..871916) Ralstonia pickettii 12D 8018464 YP_002980808.1 CDS Rpic12D_0835 NC_012856.1 871958 872329 R PFAM: transposase IS3/IS911 family protein; KEGG: bxe:Bxe_B1867 hypothetical protein; transposase IS3/IS911 family protein complement(871958..872329) Ralstonia pickettii 12D 8018465 YP_002980809.1 CDS Rpic12D_0836 NC_012856.1 872409 873305 D PFAM: fimbrial protein; KEGG: pfo:Pfl01_3037 fimbrial protein; fimbrial protein 872409..873305 Ralstonia pickettii 12D 8018466 YP_002980810.1 CDS Rpic12D_0837 NC_012856.1 873891 877691 R PFAM: protein of unknown function DUF748; KEGG: rso:RSc0896 transmembrane protein; hypothetical protein complement(873891..877691) Ralstonia pickettii 12D 8018468 YP_002980811.1 CDS Rpic12D_0838 NC_012856.1 877791 878477 R KEGG: rso:RSc0897 hydrolase protein; TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; phosphoglycolate phosphatase complement(877791..878477) Ralstonia pickettii 12D 8018469 YP_002980812.1 CDS Rpic12D_0839 NC_012856.1 878477 879193 R Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase complement(878477..879193) Ralstonia pickettii 12D 8018470 YP_002980813.1 CDS Rpic12D_0840 NC_012856.1 879353 879859 D PFAM: 17 kDa surface antigen; KEGG: rso:RSc0899 outer membrane lipoprotein transmembrane; 17 kDa surface antigen 879353..879859 Ralstonia pickettii 12D 8018471 YP_002980814.1 CDS Rpic12D_0841 NC_012856.1 880040 880696 R PFAM: OmpA/MotB domain protein; KEGG: rso:RSc0900 signal peptide protein; OmpA/MotB domain-containing protein complement(880040..880696) Ralstonia pickettii 12D 8018472 YP_002980815.1 CDS Rpic12D_0842 NC_012856.1 881128 883797 D negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 881128..883797 Ralstonia pickettii 12D 8018473 YP_002980816.1 CDS Rpic12D_0843 NC_012856.1 883926 884486 D KEGG: rso:RSc0902 signal peptide protein; signal peptide protein 883926..884486 Ralstonia pickettii 12D 8018474 YP_002980817.1 CDS Rpic12D_0844 NC_012856.1 884600 885736 D catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 884600..885736 Ralstonia pickettii 12D 8018475 YP_002980818.1 CDS Rpic12D_0845 NC_012856.1 885824 886939 D TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; Chorismate mutase; KEGG: rso:RSc0904 bifunctional chorismate mutase/prephenate dehydratase; chorismate mutase 885824..886939 Ralstonia pickettii 12D 8018476 YP_002980819.1 CDS Rpic12D_0846 NC_012856.1 886992 888116 D catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 886992..888116 Ralstonia pickettii 12D 8018477 YP_002980820.1 CDS Rpic12D_0847 NC_012856.1 888244 889122 D PFAM: prephenate dehydrogenase; KEGG: rso:RSc0906 prephenate dehydrogenase oxidoreductase protein; prephenate dehydrogenase 888244..889122 Ralstonia pickettii 12D 8018478 YP_002980821.1 CDS Rpic12D_0848 NC_012856.1 889144 890448 D catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 889144..890448 Ralstonia pickettii 12D 8018479 YP_002980822.1 CDS cmk NC_012856.1 890476 891171 D Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 890476..891171 Ralstonia pickettii 12D 8018480 YP_002980823.1 CDS rpsA NC_012856.1 891307 892995 D in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 891307..892995 Ralstonia pickettii 12D 8018481 YP_002980824.1 CDS ihfB NC_012856.1 893041 893469 D This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta 893041..893469 Ralstonia pickettii 12D 8018482 YP_002980825.1 CDS Rpic12D_0852 NC_012856.1 893663 893986 D KEGG: rso:RSc0911 hypothetical protein; hypothetical protein 893663..893986 Ralstonia pickettii 12D 8018483 YP_002980826.1 CDS Rpic12D_0853 NC_012856.1 893990 895264 D PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: rso:RSc0912 hypothetical protein; hypothetical protein 893990..895264 Ralstonia pickettii 12D 8018484 YP_002980827.1 CDS Rpic12D_0854 NC_012856.1 895329 896693 D KEGG: rso:RSc0913 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase ; Ketopantoate reductase ApbA/PanE domain protein; nucleotide sugar dehydrogenase 895329..896693 Ralstonia pickettii 12D 8018485 YP_002980828.1 CDS Rpic12D_0855 NC_012856.1 896732 897664 D TIGRFAM: rfaE bifunctional protein; PFAM: PfkB domain protein; KEGG: rso:RSc0914 ADP-heptose synthase protein; bifunctional protein RfaE 896732..897664 Ralstonia pickettii 12D 8018486 YP_002980829.1 CDS Rpic12D_0856 NC_012856.1 897683 898678 D TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: rso:RSc0915 ADP-L-glycero-D-manno-heptose-6-epimerase protein; ADP-L-glycero-D-manno-heptose-6-epimerase 897683..898678 Ralstonia pickettii 12D 8018487 YP_002980830.1 CDS Rpic12D_0857 NC_012856.1 898817 899131 D KEGG: rso:RSc0916 ComEA-related signal peptide protein; ComEA-like signal peptide protein 898817..899131 Ralstonia pickettii 12D 8018488 YP_002980831.1 CDS cysM NC_012856.1 899242 900144 D catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; cysteine synthase B 899242..900144 Ralstonia pickettii 12D 8018489 YP_002980832.1 CDS Rpic12D_0859 NC_012856.1 900213 901337 R TIGRFAM: lytic murein transglycosylase B; KEGG: rso:RSc0918 membrane-bound lytic murein transglycosylase B protein; lytic murein transglycosylase B complement(900213..901337) Ralstonia pickettii 12D 8018490 YP_002980833.1 CDS Rpic12D_0860 NC_012856.1 901469 902392 D PFAM: histone deacetylase superfamily; KEGG: rso:RSc0919 hypothetical protein; histone deacetylase superfamily protein 901469..902392 Ralstonia pickettii 12D 8018491 YP_002980834.1 CDS metN NC_012856.1 902557 903606 D part of the metNIQ transport system for methionine; DL-methionine transporter ATP-binding subunit 902557..903606 Ralstonia pickettii 12D 8018492 YP_002980835.1 CDS Rpic12D_0862 NC_012856.1 903596 904249 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc0921 transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein 903596..904249 Ralstonia pickettii 12D 8018493 YP_002980836.1 CDS Rpic12D_0863 NC_012856.1 904282 905082 D TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: rso:RSc0922 signal peptide protein; lipoprotein 904282..905082 Ralstonia pickettii 12D 8018494 YP_002980837.1 CDS Rpic12D_0864 NC_012856.1 905272 906021 D PFAM: electron transfer flavoprotein alpha/beta-subunit; KEGG: rso:RSc0923 electron transfer flavoprotein subunit beta; electron transfer flavoprotein alpha/beta-subunit 905272..906021 Ralstonia pickettii 12D 8018495 YP_002980838.1 CDS Rpic12D_0865 NC_012856.1 906087 907022 D PFAM: electron transfer flavoprotein alpha subunit ; electron transfer flavoprotein alpha/beta-subunit; KEGG: rso:RSc0924 electron transfer flavoprotein subunit alpha; electron transfer flavoprotein subunit alpha 906087..907022 Ralstonia pickettii 12D 8018496 YP_002980839.1 CDS Rpic12D_0866 NC_012856.1 907191 908975 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rso:RSc0925 acyl-CoA dehydrogenase oxidoreductase protein; acyl-CoA dehydrogenase domain-containing protein 907191..908975 Ralstonia pickettii 12D 8018497 YP_002980840.1 CDS Rpic12D_0867 NC_012856.1 909041 910330 R catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit complement(909041..910330) Ralstonia pickettii 12D 8018498 YP_002980841.1 CDS Rpic12D_0868 NC_012856.1 910453 910950 D PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: rso:RSc0927 leucine-responsive regulatory DNA-binding transcription regulator protein; AsnC family transcriptional regulator 910453..910950 Ralstonia pickettii 12D 8018499 YP_002980842.1 CDS Rpic12D_0869 NC_012856.1 911015 912634 D KEGG: vei:Veis_2978 alkaline phosphatase; alkaline phosphatase 911015..912634 Ralstonia pickettii 12D 8018500 YP_002980843.1 CDS Rpic12D_0870 NC_012856.1 912717 913841 D PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rso:RSc0928 hypothetical protein; radical SAM protein 912717..913841 Ralstonia pickettii 12D 8018501 YP_002980844.1 CDS Rpic12D_0871 NC_012856.1 913842 914297 R KEGG: rso:RSc0929 hypothetical protein; hypothetical protein complement(913842..914297) Ralstonia pickettii 12D 8018502 YP_002980845.1 CDS Rpic12D_0872 NC_012856.1 914488 914661 R KEGG: rso:RSc0930 hypothetical protein; hypothetical protein complement(914488..914661) Ralstonia pickettii 12D 8018503 YP_002980846.1 CDS Rpic12D_0873 NC_012856.1 914788 915177 R KEGG: rso:RSc0931 signal peptide protein; signal peptide protein complement(914788..915177) Ralstonia pickettii 12D 8018504 YP_002980847.1 CDS Rpic12D_0874 NC_012856.1 915371 916444 R KEGG: rso:RSc0932 membrane-bound dehydrogenase oxidoreductase protein; membrane-bound dehydrogenase oxidoreductase protein complement(915371..916444) Ralstonia pickettii 12D 8018505 YP_002980848.1 CDS rpsP NC_012856.1 916590 916844 D binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 916590..916844 Ralstonia pickettii 12D 8018506 YP_002980849.1 CDS rimM NC_012856.1 916978 917532 D Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 916978..917532 Ralstonia pickettii 12D 8018507 YP_002980850.1 CDS trmD NC_012856.1 917556 918344 D methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 917556..918344 Ralstonia pickettii 12D 8018508 YP_002980851.1 CDS rplS NC_012856.1 918418 918804 D this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 918418..918804 Ralstonia pickettii 12D 8018509 YP_002980852.1 CDS Rpic12D_0879 NC_012856.1 918910 919614 D PFAM: NUDIX hydrolase; KEGG: rso:RSc0937 hypothetical protein; NUDIX hydrolase 918910..919614 Ralstonia pickettii 12D 8018510 YP_002980853.1 CDS Rpic12D_0880 NC_012856.1 919722 920663 D PFAM: cobalamin biosynthesis protein CbiB; KEGG: rso:RSc0938 adenosylcobinamide-phosphate synthase; CobD/CbiB family protein 919722..920663 Ralstonia pickettii 12D 8018511 YP_002980854.1 CDS Rpic12D_0881 NC_012856.1 920696 921010 R KEGG: rso:RSc0939 hypothetical protein; hypothetical protein complement(920696..921010) Ralstonia pickettii 12D 8018512 YP_002980855.1 CDS Rpic12D_0882 NC_012856.1 921041 921988 R EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase complement(921041..921988) Ralstonia pickettii 12D 8018513 YP_002980856.1 CDS Rpic12D_0883 NC_012856.1 921985 923253 R PFAM: peptidase M48 Ste24p; KEGG: rso:RSc0941 integral membrane protease transmembrane protein; Ste24 endopeptidase complement(921985..923253) Ralstonia pickettii 12D 8018514 YP_002980857.1 CDS Rpic12D_0884 NC_012856.1 923330 923977 D 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease 923330..923977 Ralstonia pickettii 12D 8018515 YP_002980858.1 CDS mogA NC_012856.1 923981 924628 R forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA complement(923981..924628) Ralstonia pickettii 12D 8018516 YP_002980859.1 CDS Rpic12D_0886 NC_012856.1 924625 925251 R PFAM: protein of unknown function DUF615; KEGG: rso:RSc0944 hypothetical protein; hypothetical protein complement(924625..925251) Ralstonia pickettii 12D 8018517 YP_002980860.1 CDS Rpic12D_0887 NC_012856.1 925336 926709 D PFAM: peptidase U62 modulator of DNA gyrase; KEGG: rso:RSc0945 PmbA protein (TldE protein); peptidase U62 modulator of DNA gyrase 925336..926709 Ralstonia pickettii 12D 8018518 YP_002980861.1 CDS Rpic12D_0888 NC_012856.1 926773 927276 R PFAM: dihydrofolate reductase region; KEGG: rso:RSc0946 dihydrofolate reductase oxidoreductase protein; dihydrofolate reductase complement(926773..927276) Ralstonia pickettii 12D 8018519 YP_002980862.1 CDS thyA NC_012856.1 927281 928123 R ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase complement(927281..928123) Ralstonia pickettii 12D 8018520 YP_002980863.1 CDS Rpic12D_0890 NC_012856.1 928291 929292 D PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: rso:RSc0948 hypothetical protein; hypothetical protein 928291..929292 Ralstonia pickettii 12D 8018521 YP_002980864.1 CDS Rpic12D_0891 NC_012856.1 929289 929981 R PFAM: integral membrane protein TerC; KEGG: rso:RSc0949 hypothetical protein; integral membrane protein TerC complement(929289..929981) Ralstonia pickettii 12D 8018522 YP_002980865.1 CDS Rpic12D_0892 NC_012856.1 930498 931544 D TIGRFAM: methyltransferase; KEGG: rso:RSc0950 hypothetical protein; methyltransferase 930498..931544 Ralstonia pickettii 12D 8018523 YP_002980866.1 CDS Rpic12D_0893 NC_012856.1 931612 932910 D PFAM: protein of unknown function DUF323; KEGG: rso:RSc0951 hypothetical protein; hypothetical protein 931612..932910 Ralstonia pickettii 12D 8018524 YP_002980867.1 CDS Rpic12D_0894 NC_012856.1 933048 934931 R PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicases ; helicase domain protein; KEGG: rso:RSc0952 ATP-dependent RNA helicase protein; DEAD/DEAH box helicase complement(933048..934931) Ralstonia pickettii 12D 8018525 YP_002980868.1 CDS Rpic12D_0895 NC_012856.1 935431 935619 D KEGG: rso:RSc0953 hypothetical protein; hypothetical protein 935431..935619 Ralstonia pickettii 12D 8018526 YP_002980869.1 CDS Rpic12D_0896 NC_012856.1 936116 936331 D KEGG: rso:RSc0971 hypothetical protein; hypothetical protein 936116..936331 Ralstonia pickettii 12D 8018528 YP_002980870.1 CDS Rpic12D_0897 NC_012856.1 936412 937323 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: rso:RSc0973 amino-acid-binding periplasmic (PBP) ABC transporter protein; family 3 extracellular solute-binding protein complement(936412..937323) Ralstonia pickettii 12D 8018529 YP_002980871.1 CDS Rpic12D_0898 NC_012856.1 937794 938000 R KEGG: rso:RSc0974 hypothetical protein; hypothetical protein complement(937794..938000) Ralstonia pickettii 12D 8018530 YP_002980872.1 CDS Rpic12D_0899 NC_012856.1 938093 940084 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RSc0975 ABC transporter ATP-binding protein; ABC transporter 938093..940084 Ralstonia pickettii 12D 8018531 YP_002980873.1 CDS Rpic12D_0900 NC_012856.1 940257 942242 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 940257..942242 Ralstonia pickettii 12D 8018532 YP_002980874.1 CDS Rpic12D_0901 NC_012856.1 942259 943149 D PFAM: Lytic transglycosylase catalytic; Transglycosylase domain protein; KEGG: rso:RSc0977 transglycosylase signal peptide protein; lytic transglycosylase catalytic subunit 942259..943149 Ralstonia pickettii 12D 8018533 YP_002980875.1 CDS Rpic12D_0902 NC_012856.1 943199 945541 D decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 943199..945541 Ralstonia pickettii 12D 8018534 YP_002980876.1 CDS Rpic12D_0903 NC_012856.1 945546 946124 D PFAM: chromate transporter; KEGG: rso:RSc0979 hypothetical protein; chromate transporter 945546..946124 Ralstonia pickettii 12D 8018535 YP_002980877.1 CDS Rpic12D_0904 NC_012856.1 946121 946651 D PFAM: chromate transporter; KEGG: rso:RSc0980 hypothetical protein; chromate transporter 946121..946651 Ralstonia pickettii 12D 8018536 YP_002980878.1 CDS Rpic12D_0905 NC_012856.1 946889 948271 D PFAM: amino acid permease-associated region; KEGG: rme:Rmet_5046 amino acid permease-associated region; amino acid permease-associated protein 946889..948271 Ralstonia pickettii 12D 8018537 YP_002980879.1 CDS Rpic12D_0906 NC_012856.1 948321 949640 D PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: cti:RALTA_A0653 histidine permease; major facilitator superfamily protein 948321..949640 Ralstonia pickettii 12D 8018538 YP_002980880.1 CDS Rpic12D_0907 NC_012856.1 949644 951476 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: reh:H16_A2666 ABC-type transporter, ATPase and permease components: LipidE family; ABC transporter complement(949644..951476) Ralstonia pickettii 12D 8018539 YP_002980881.1 CDS Rpic12D_0908 NC_012856.1 952210 953886 R TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: rso:RSc0981 L-lactate permease transmembrane protein; L-lactate transport complement(952210..953886) Ralstonia pickettii 12D 8018540 YP_002980882.1 CDS Rpic12D_0910 NC_012856.1 956669 957850 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bcj:BCAL1674 multidrug efflux system AmrA protein; RND family efflux transporter MFP subunit 956669..957850 Ralstonia pickettii 12D 8018542 YP_002980883.1 CDS Rpic12D_0911 NC_012856.1 957853 961008 D TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: pae:PA2018 multidrug efflux protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 957853..961008 Ralstonia pickettii 12D 8018543 YP_002980884.1 CDS Rpic12D_0912 NC_012856.1 961021 961845 R KEGG: bps:BPSS0716 hypothetical protein; hypothetical protein complement(961021..961845) Ralstonia pickettii 12D 8018544 YP_002980885.1 CDS Rpic12D_0913 NC_012856.1 961842 963128 R PFAM: MASE1 domain protein; PAS fold-3 domain protein; KEGG: rso:RSc0982 hypothetical protein; PAS/PAC sensor protein complement(961842..963128) Ralstonia pickettii 12D 8018545 YP_002980886.1 CDS Rpic12D_0914 NC_012856.1 963218 963859 R PFAM: Glutathione S-transferase domain; KEGG: rso:RSc0984 gst-related protein; glutathione S-transferase complement(963218..963859) Ralstonia pickettii 12D 8018546 YP_002980887.1 CDS Rpic12D_0915 NC_012856.1 963907 965097 R PFAM: aminotransferase class I and II; KEGG: rso:RSc0985 aminotransferase protein; GntR family transcriptional regulator complement(963907..965097) Ralstonia pickettii 12D 8018547 YP_002980888.1 CDS Rpic12D_0916 NC_012856.1 965229 965699 R PFAM: endoribonuclease L-PSP; KEGG: rso:RSc0986 hypothetical protein; endoribonuclease L-PSP complement(965229..965699) Ralstonia pickettii 12D 8018548 YP_002980889.1 CDS Rpic12D_0917 NC_012856.1 965745 966683 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RSc0987 hypothetical protein; hypothetical protein complement(965745..966683) Ralstonia pickettii 12D 8018549 YP_002980890.1 CDS Rpic12D_0918 NC_012856.1 966693 967412 R PFAM: threonyl/alanyl tRNA synthetase SAD; KEGG: rso:RSc0988 hypothetical protein; threonyl/alanyl tRNA synthetase SAD complement(966693..967412) Ralstonia pickettii 12D 8018550 YP_002980891.1 CDS Rpic12D_0919 NC_012856.1 967468 969021 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: rso:RSc0989 transcription regulator protein; GntR family transcriptional regulator 967468..969021 Ralstonia pickettii 12D 8018551 YP_002980892.1 CDS Rpic12D_0920 NC_012856.1 969117 971048 D molecular chaperone; heat shock protein 90 969117..971048 Ralstonia pickettii 12D 8018552 YP_002980893.1 CDS Rpic12D_0921 NC_012856.1 971057 971554 D PFAM: uracil-DNA glycosylase superfamily; KEGG: reh:H16_A2653 G:T/U mismatch-specific DNA glycosylase; uracil-DNA glycosylase 971057..971554 Ralstonia pickettii 12D 8018553 YP_002980894.1 CDS Rpic12D_0922 NC_012856.1 971603 972334 R KEGG: reh:H16_A2651 methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein complement(971603..972334) Ralstonia pickettii 12D 8018554 YP_002980895.1 CDS Rpic12D_0923 NC_012856.1 972766 973275 D KEGG: rso:RS02104 hypothetical protein; hypothetical protein 972766..973275 Ralstonia pickettii 12D 8018555 YP_002980896.1 CDS Rpic12D_0924 NC_012856.1 973454 974212 D PFAM: Tetratricopeptide TPR_4; KEGG: rso:RSc0994 hypothetical protein; hypothetical protein 973454..974212 Ralstonia pickettii 12D 8018556 YP_002980897.1 CDS Rpic12D_0925 NC_012856.1 974221 975096 D KEGG: rso:RSc0995 hypothetical protein; hypothetical protein 974221..975096 Ralstonia pickettii 12D 8018557 YP_002980898.1 CDS Rpic12D_0926 NC_012856.1 975164 975562 R KEGG: reu:Reut_A2665 hypothetical protein; hypothetical protein complement(975164..975562) Ralstonia pickettii 12D 8018558 YP_002980899.1 CDS Rpic12D_0927 NC_012856.1 975711 976886 R KEGG: rso:RSc0996 hypothetical protein; hypothetical protein complement(975711..976886) Ralstonia pickettii 12D 8018559 YP_002980900.1 CDS Rpic12D_0928 NC_012856.1 976903 977511 R KEGG: rso:RSc0997 hypothetical protein; hypothetical protein complement(976903..977511) Ralstonia pickettii 12D 8018560 YP_002980901.1 CDS Rpic12D_0929 NC_012856.1 977525 978406 R PFAM: ATPase AAA; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rso:RSc0998 hypothetical protein; ATPase AAA complement(977525..978406) Ralstonia pickettii 12D 8018561 YP_002980902.1 CDS Rpic12D_0930 NC_012856.1 978707 979075 D PFAM: cytochrome C class I; KEGG: rso:RSc0999 periplasmic cytochrome type-c oxidoreductase signal peptide protein; class I cytochrome c 978707..979075 Ralstonia pickettii 12D 8018562 YP_002980903.1 CDS Rpic12D_0931 NC_012856.1 979087 979485 D KEGG: rso:RSc1000 periplasmic cytochrome type-c oxidoreductase signal peptide protein; periplasmic cytochrome type-c oxidoreductase signal peptide protein 979087..979485 Ralstonia pickettii 12D 8018563 YP_002980904.1 CDS Rpic12D_0932 NC_012856.1 979545 979979 R PFAM: Domain of unknown function DUF1841; KEGG: rso:RSc1001 hypothetical protein; hypothetical protein complement(979545..979979) Ralstonia pickettii 12D 8018564 YP_002980905.1 CDS Rpic12D_0933 NC_012856.1 980094 981029 D PFAM: protein of unknown function DUF6 transmembrane; protein of unknown function DUF250; KEGG: rso:RSc1002 hypothetical protein; hypothetical protein 980094..981029 Ralstonia pickettii 12D 8018565 YP_002980906.1 CDS Rpic12D_0934 NC_012856.1 981101 982942 R PFAM: peptidase S10 serine carboxypeptidase; KEGG: bcm:Bcenmc03_0813 peptidase S10 serine carboxypeptidase; peptidase S10 serine carboxypeptidase complement(981101..982942) Ralstonia pickettii 12D 8018566 YP_002980907.1 CDS Rpic12D_0935 NC_012856.1 983515 984102 D PFAM: nitroreductase; KEGG: rso:RSc1004 hypothetical protein; hypothetical protein 983515..984102 Ralstonia pickettii 12D 8018567 YP_002980908.1 CDS Rpic12D_0936 NC_012856.1 984163 984807 R KEGG: rso:RSc1005 endonuclease III protein; TIGRFAM: endonuclease III; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; SMART: HhH-GPD family protein; endonuclease III complement(984163..984807) Ralstonia pickettii 12D 8018568 YP_002980909.1 CDS Rpic12D_0937 NC_012856.1 984821 985651 R Involved in the electron transport chain; ferredoxin complement(984821..985651) Ralstonia pickettii 12D 8018569 YP_002980910.1 CDS Rpic12D_0938 NC_012856.1 985792 986487 D PFAM: regulatory protein TetR; KEGG: rso:RSc1007 transcription regulator protein; TetR family transcriptional regulator 985792..986487 Ralstonia pickettii 12D 8018570 YP_002980911.1 CDS Rpic12D_0939 NC_012856.1 986558 987829 R TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: rso:RSc1008 poly[D(-)-3-hydroxybutyrate] depolymerase protein; polyhydroxyalkanoate depolymerase complement(986558..987829) Ralstonia pickettii 12D 8018571 YP_002980912.1 CDS Rpic12D_0940 NC_012856.1 988035 989231 R catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase complement(988035..989231) Ralstonia pickettii 12D 8018572 YP_002980913.1 CDS Rpic12D_0941 NC_012856.1 989568 991658 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 989568..991658 Ralstonia pickettii 12D 8018573 YP_002980914.1 CDS Rpic12D_0942 NC_012856.1 991822 993906 D KEGG: rso:RSc1012 site-specific recombinase transmembrane protein; site-specific recombinase transmembrane protein 991822..993906 Ralstonia pickettii 12D 8018574 YP_002980915.1 CDS Rpic12D_0943 NC_012856.1 993903 994868 R TIGRFAM: ribokinase; PFAM: PfkB domain protein; KEGG: rso:RSc1013 ribokinase protein; ribokinase complement(993903..994868) Ralstonia pickettii 12D 8018575 YP_002980916.1 CDS Rpic12D_0944 NC_012856.1 994906 995946 R PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: rso:RSc1014 transcriptional regulatory DNA-binding repressor transcription regulator protein; LacI family transcriptional regulator complement(994906..995946) Ralstonia pickettii 12D 8018576 YP_002980917.1 CDS Rpic12D_0945 NC_012856.1 995965 996972 R PFAM: inner-membrane translocator; KEGG: rso:RSc1015 transmembrane ABC transporter protein; monosaccharide-transporting ATPase complement(995965..996972) Ralstonia pickettii 12D 8018577 YP_002980918.1 CDS Rpic12D_0946 NC_012856.1 996962 998542 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RSc1016 ABC transporter ATP-binding protein; ABC transporter complement(996962..998542) Ralstonia pickettii 12D 8018578 YP_002980919.1 CDS Rpic12D_0947 NC_012856.1 998572 999531 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rso:RSc1017 sugar-binding periplasmic (PBP) ABC transporter protein; LacI family transcriptional regulator complement(998572..999531) Ralstonia pickettii 12D 8018579 YP_002980920.1 CDS Rpic12D_0948 NC_012856.1 999955 1000548 D TIGRFAM: iron-sulfur cluster assembly transcription factor IscR; transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: rso:RSc1018 hypothetical protein; BadM/Rrf2 family transcriptional regulator 999955..1000548 Ralstonia pickettii 12D 8018580 YP_002980921.1 CDS Rpic12D_0949 NC_012856.1 1000622 1001839 D TIGRFAM: cysteine desulfurase IscS; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rso:RSc1019 pyridoxal-phosphate-dependent aminotransferase (NifS protein); cysteine desulfurase IscS 1000622..1001839 Ralstonia pickettii 12D 8018581 YP_002980922.1 CDS Rpic12D_0950 NC_012856.1 1001899 1002300 D TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein; KEGG: rso:RSc1020 scaffold protein; scaffold protein 1001899..1002300 Ralstonia pickettii 12D 8018582 YP_002980923.1 CDS Rpic12D_0951 NC_012856.1 1002327 1002647 D TIGRFAM: iron-sulfur cluster assembly protein IscA; iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: rso:RSc1021 hypothetical protein; iron-sulfur cluster assembly protein IscA 1002327..1002647 Ralstonia pickettii 12D 8018583 YP_002980924.1 CDS Rpic12D_0952 NC_012856.1 1002658 1002858 D KEGG: rso:RSc1022 hypothetical protein; hypothetical protein 1002658..1002858 Ralstonia pickettii 12D 8018584 YP_002980925.1 CDS hscB NC_012856.1 1002903 1003442 D J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins; co-chaperone HscB 1002903..1003442 Ralstonia pickettii 12D 8018585 YP_002980926.1 CDS hscA NC_012856.1 1003512 1005377 D involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA 1003512..1005377 Ralstonia pickettii 12D 8018586 YP_002980927.1 CDS Rpic12D_0955 NC_012856.1 1005424 1005762 D TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin; KEGG: rso:RSc1025 ferredoxin [2Fe-2S] protein; ferredoxin, 2Fe-2S type, ISC system 1005424..1005762 Ralstonia pickettii 12D 8018587 YP_002980928.1 CDS Rpic12D_0956 NC_012856.1 1005794 1005988 D TIGRFAM: FeS assembly protein IscX; PFAM: protein of unknown function DUF528; KEGG: rso:RSc1026 hypothetical protein; FeS assembly protein IscX 1005794..1005988 Ralstonia pickettii 12D 8018588 YP_002980929.1 CDS Rpic12D_0957 NC_012856.1 1006086 1006829 R PFAM: 17 kDa surface antigen; KEGG: rso:RSc1027 hypothetical protein; 17 kDa surface antigen complement(1006086..1006829) Ralstonia pickettii 12D 8018589 YP_002980930.1 CDS lysS NC_012856.1 1007095 1008639 R class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase complement(1007095..1008639) Ralstonia pickettii 12D 8018590 YP_002980931.1 CDS Rpic12D_0959 NC_012856.1 1008664 1009404 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rso:RSc1029 short chain dehydrogenase; short chain dehydrogenase complement(1008664..1009404) Ralstonia pickettii 12D 8018591 YP_002980932.1 CDS Rpic12D_0960 NC_012856.1 1009430 1010534 R KEGG: bpm:BURPS1710b_3602 hypothetical protein; hypothetical protein complement(join(1009430..1010452,1010454..1010534)) Ralstonia pickettii 12D 8018592 YP_002980933.1 CDS Rpic12D_0961 NC_012856.1 1010716 1011885 D catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 1010716..1011885 Ralstonia pickettii 12D 8018593 YP_002980934.1 CDS Rpic12D_0962 NC_012856.1 1011975 1012694 D PFAM: protein of unknown function DUF162; KEGG: rso:RSc1032 transmembrane protein; hypothetical protein 1011975..1012694 Ralstonia pickettii 12D 8018594 YP_002980935.1 CDS Rpic12D_0963 NC_012856.1 1012834 1014243 D KEGG: rso:RSc1033 hypothetical protein; hypothetical protein 1012834..1014243 Ralstonia pickettii 12D 8018595 YP_002980936.1 CDS Rpic12D_0964 NC_012856.1 1014263 1015264 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: rso:RSc1034 2-hydroxyacid dehydrogenase; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 1014263..1015264 Ralstonia pickettii 12D 8018596 YP_002980937.1 CDS Rpic12D_0965 NC_012856.1 1015277 1016749 D PFAM: protein of unknown function DUF195; KEGG: rso:RSc1035 hypothetical protein; hypothetical protein 1015277..1016749 Ralstonia pickettii 12D 8018597 YP_002980938.1 CDS Rpic12D_0966 NC_012856.1 1016834 1017112 R KEGG: rso:RSc1036 hypothetical protein; hypothetical protein complement(1016834..1017112) Ralstonia pickettii 12D 8018598 YP_002980939.1 CDS Rpic12D_0967 NC_012856.1 1017264 1018544 R TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; MoeA domain protein domain IV; molybdopterin binding domain; KEGG: rso:RSc1037 molybdopterin biosynthesis MoeA protein; molybdenum cofactor synthesis domain-containing protein complement(1017264..1018544) Ralstonia pickettii 12D 8018599 YP_002980940.1 CDS mobA NC_012856.1 1018577 1019191 R in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA complement(1018577..1019191) Ralstonia pickettii 12D 8018600 YP_002980941.1 CDS moaA NC_012856.1 1019212 1020333 R together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A complement(1019212..1020333) Ralstonia pickettii 12D 8018601 YP_002980942.1 CDS Rpic12D_0970 NC_012856.1 1020517 1023543 R KEGG: rso:RSc1040 ribonuclease E protein; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; SMART: RNA binding S1 domain protein; ribonuclease, Rne/Rng family complement(1020517..1023543) Ralstonia pickettii 12D 8018602 YP_002980943.1 CDS Rpic12D_0971 NC_012856.1 1024283 1025317 D KEGG: rso:RSc1041 ribosomal large subunit pseudouridine synthase C protein; TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; pseudouridine synthase 1024283..1025317 Ralstonia pickettii 12D 8018603 YP_002980944.1 CDS Rpic12D_0972 NC_012856.1 1025298 1025957 D TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rso:RSc1042 phosphoglycolate phosphatase protein; HAD-superfamily hydrolase 1025298..1025957 Ralstonia pickettii 12D 8018604 YP_002980945.1 CDS Rpic12D_0973 NC_012856.1 1025959 1026351 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: rso:RSc1043 hypothetical protein; Rieske (2Fe-2S) domain-containing protein 1025959..1026351 Ralstonia pickettii 12D 8018605 YP_002980946.1 CDS Rpic12D_0974 NC_012856.1 1026390 1027484 D PFAM: peptidase S49; KEGG: rso:RSc1044 protease transmembrane protein; peptidase S49 1026390..1027484 Ralstonia pickettii 12D 8018606 YP_002980947.1 CDS Rpic12D_0975 NC_012856.1 1027501 1028232 R PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rso:RSc1045 hypothetical protein; uroporphyrin-III C/tetrapyrrole methyltransferase complement(1027501..1028232) Ralstonia pickettii 12D 8018607 YP_002980948.1 CDS Rpic12D_0976 NC_012856.1 1028236 1028832 R Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein complement(1028236..1028832) Ralstonia pickettii 12D 8018608 YP_002980949.1 CDS Rpic12D_0977 NC_012856.1 1029027 1029563 D PFAM: protein of unknown function DUF177; KEGG: rso:RSc1047 hypothetical protein; hypothetical protein 1029027..1029563 Ralstonia pickettii 12D 8018609 YP_002980950.1 CDS rpmF NC_012856.1 1029679 1029858 D some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 1029679..1029858 Ralstonia pickettii 12D 8018610 YP_002980951.1 CDS Rpic12D_0979 NC_012856.1 1030049 1031110 D involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 1030049..1031110 Ralstonia pickettii 12D 8018611 YP_002980952.1 CDS Rpic12D_0980 NC_012856.1 1031147 1032127 D FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 1031147..1032127 Ralstonia pickettii 12D 8018612 YP_002980953.1 CDS Rpic12D_0981 NC_012856.1 1032160 1033089 D TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: rso:RSc1051 acyl-carrier-protein S-malonyltransferase; cyclic nucleotide-binding protein 1032160..1033089 Ralstonia pickettii 12D 8018613 YP_002980954.1 CDS fabG NC_012856.1 1033104 1033853 D catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 1033104..1033853 Ralstonia pickettii 12D 8018614 YP_002980955.1 CDS acpP NC_012856.1 1034040 1034279 D carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 1034040..1034279 Ralstonia pickettii 12D 8018615 YP_002980956.1 CDS Rpic12D_0984 NC_012856.1 1034393 1035625 D FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II 1034393..1035625 Ralstonia pickettii 12D 8018616 YP_002980957.1 CDS Rpic12D_0985 NC_012856.1 1036226 1036825 D Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE 1036226..1036825 Ralstonia pickettii 12D 8018617 YP_002980958.1 CDS Rpic12D_0986 NC_012856.1 1036933 1037565 D PFAM: Anti sigma-E protein RseA family protein; KEGG: rso:RSc1056 transmembrane sigma-E factor negative regulatory transcription regulator protein; anti sigma-E protein, RseA 1036933..1037565 Ralstonia pickettii 12D 8018618 YP_002980959.1 CDS Rpic12D_0987 NC_012856.1 1037565 1038674 D KEGG: rso:RSc1057 sigma-E factor regulatory (negative regulator) transcription regulator protein; putative sigma E regulatory protein MucB/RseB 1037565..1038674 Ralstonia pickettii 12D 8018619 YP_002980960.1 CDS Rpic12D_0988 NC_012856.1 1038757 1040268 D KEGG: rso:RSc1058 periplasmic protease signal peptide protein; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; protease Do 1038757..1040268 Ralstonia pickettii 12D 8018620 YP_002980961.1 CDS Rpic12D_0989 NC_012856.1 1040265 1040540 D PFAM: glutaredoxin 2; KEGG: rso:RSc1059 hypothetical protein; glutaredoxin 1040265..1040540 Ralstonia pickettii 12D 8018621 YP_002980962.1 CDS Rpic12D_0990 NC_012856.1 1040757 1042556 D binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 1040757..1042556 Ralstonia pickettii 12D 8018622 YP_002980963.1 CDS Rpic12D_0991 NC_012856.1 1042587 1043480 D KEGG: rso:RSc1061 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; signal peptidase I 1042587..1043480 Ralstonia pickettii 12D 8018623 YP_002980964.1 CDS Rpic12D_0992 NC_012856.1 1043543 1043911 D KEGG: rso:RSc1062 hypothetical protein; hypothetical protein 1043543..1043911 Ralstonia pickettii 12D 8018624 YP_002980965.1 CDS rnc NC_012856.1 1043913 1044683 D cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 1043913..1044683 Ralstonia pickettii 12D 8018625 YP_002980966.1 CDS era NC_012856.1 1044692 1045630 D Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 1044692..1045630 Ralstonia pickettii 12D 8018626 YP_002980967.1 CDS recO NC_012856.1 1045664 1046485 D involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 1045664..1046485 Ralstonia pickettii 12D 8018627 YP_002980968.1 CDS Rpic12D_0996 NC_012856.1 1046482 1047273 D involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 1046482..1047273 Ralstonia pickettii 12D 8018628 YP_002980969.1 CDS acpS NC_012856.1 1047297 1047713 D Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 1047297..1047713 Ralstonia pickettii 12D 8018629 YP_002980970.1 CDS Rpic12D_0998 NC_012856.1 1047710 1048759 D hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase 1047710..1048759 Ralstonia pickettii 12D 8018630 YP_002980971.1 CDS Rpic12D_0999 NC_012856.1 1048836 1049411 R Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P complement(1048836..1049411) Ralstonia pickettii 12D 8018631 YP_002980972.1 CDS Rpic12D_1000 NC_012856.1 1049528 1050721 R KEGG: rso:RSc1070 hypothetical protein; hypothetical protein complement(1049528..1050721) Ralstonia pickettii 12D 8018632 YP_002980973.1 CDS uvrC NC_012856.1 1050813 1052786 D The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 1050813..1052786 Ralstonia pickettii 12D 8018633 YP_002980974.1 CDS Rpic12D_1002 NC_012856.1 1052854 1053429 D KEGG: rso:RSc1072 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase transmembrane protein; TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase 1052854..1053429 Ralstonia pickettii 12D 8018634 YP_002980975.1 CDS Rpic12D_1004 NC_012856.1 1055803 1056516 D PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: rso:RSc1073 two-component system response regulator transcription regulator protein; winged helix family two component transcriptional regulator 1055803..1056516 Ralstonia pickettii 12D 8018639 YP_002980976.1 CDS Rpic12D_1005 NC_012856.1 1056500 1058179 D PFAM: peptidoglycan-binding LysM; FecR protein; SMART: peptidoglycan-binding LysM; KEGG: rso:RSc1074 signal peptide protein; peptidoglycan-binding LysM 1056500..1058179 Ralstonia pickettii 12D 8018640 YP_002980977.1 CDS Rpic12D_1006 NC_012856.1 1058172 1060505 D PFAM: CHASE2 domain protein; PAS fold-4 domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: rso:RSc1075 two-component system sensor histidine kinase transcription regulator protein; PAS/PAC sensor signal transduction histidine kinase 1058172..1060505 Ralstonia pickettii 12D 8018641 YP_002980978.1 CDS Rpic12D_1007 NC_012856.1 1060683 1060883 D hypothetical protein 1060683..1060883 Ralstonia pickettii 12D 8018642 YP_002980979.1 CDS Rpic12D_1008 NC_012856.1 1060918 1061625 D PFAM: transcriptional regulator domain protein; KEGG: rso:RSc1076 two-component system response regulator transcription regulator protein; winged helix family two component transcriptional regulator 1060918..1061625 Ralstonia pickettii 12D 8018643 YP_002980980.1 CDS Rpic12D_1009 NC_012856.1 1061653 1061904 D KEGG: rso:RSc1077 hypothetical protein; hypothetical protein 1061653..1061904 Ralstonia pickettii 12D 8018644 YP_002980981.1 CDS Rpic12D_1010 NC_012856.1 1062211 1062966 R PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: rso:RSc1078 transcriptional regulatory DNA-binding transcription regulator protein; GntR family transcriptional regulator complement(1062211..1062966) Ralstonia pickettii 12D 8018645 YP_002980982.1 CDS Rpic12D_1011 NC_012856.1 1063053 1064423 D KEGG: rso:RSc1079 glucarate dehydratase protein; TIGRFAM: glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing protein; glucarate dehydratase 1063053..1064423 Ralstonia pickettii 12D 8018646 YP_002980983.1 CDS Rpic12D_1012 NC_012856.1 1064518 1065810 D PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc1080 hexuronate transporter transmembrane protein; major facilitator superfamily protein 1064518..1065810 Ralstonia pickettii 12D 8018647 YP_002980984.1 CDS Rpic12D_1013 NC_012856.1 1065821 1068232 D PFAM: glycoside hydrolase family 31; KEGG: rso:RSc1081 glucosidase protein; glycoside hydrolase family protein 1065821..1068232 Ralstonia pickettii 12D 8018648 YP_002980985.1 CDS Rpic12D_1014 NC_012856.1 1068326 1069534 D PFAM: porin Gram-negative type; KEGG: rso:RSc1082 porin transmembrane protein; porin 1068326..1069534 Ralstonia pickettii 12D 8018649 YP_002980986.1 CDS Rpic12D_1015 NC_012856.1 1069534 1070469 D PFAM: aldose 1-epimerase; KEGG: rso:RSc1083 hypothetical protein; aldose 1-epimerase 1069534..1070469 Ralstonia pickettii 12D 8018650 YP_002980987.1 CDS Rpic12D_1016 NC_012856.1 1070984 1072222 D PFAM: integrase family protein; KEGG: eba:ebA1360 hypothetical protein; integrase family protein 1070984..1072222 Ralstonia pickettii 12D 8018651 YP_002980988.1 CDS Rpic12D_1017 NC_012856.1 1072826 1073128 D KEGG: bxe:Bxe_A2408 hypothetical protein; hypothetical protein 1072826..1073128 Ralstonia pickettii 12D 8018652 YP_002980989.1 CDS Rpic12D_1018 NC_012856.1 1073128 1073796 D KEGG: bch:Bcen2424_0199 hypothetical protein; hypothetical protein 1073128..1073796 Ralstonia pickettii 12D 8018653 YP_002980990.1 CDS Rpic12D_1019 NC_012856.1 1073797 1074120 R PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bte:BTH_I0107 XRE family transcriptional regulator; XRE family transcriptional regulator complement(1073797..1074120) Ralstonia pickettii 12D 8018654 YP_002980991.1 CDS Rpic12D_1020 NC_012856.1 1074225 1075103 D KEGG: aau:AAur_1713 cell division protein FtsZ; hypothetical protein 1074225..1075103 Ralstonia pickettii 12D 8018655 YP_002980992.1 CDS Rpic12D_1021 NC_012856.1 1075149 1075859 D KEGG: bxe:Bxe_A2401 hypothetical protein; hypothetical protein 1075149..1075859 Ralstonia pickettii 12D 8018656 YP_002980993.1 CDS Rpic12D_1022 NC_012856.1 1075908 1077338 D KEGG: oan:Oant_1303 hypothetical protein; hypothetical protein 1075908..1077338 Ralstonia pickettii 12D 8018657 YP_002980994.1 CDS Rpic12D_1026 NC_012856.1 1078185 1078856 R hypothetical protein complement(1078185..1078856) Ralstonia pickettii 12D 8018661 YP_002980995.1 CDS Rpic12D_1027 NC_012856.1 1079471 1079713 R hypothetical protein complement(1079471..1079713) Ralstonia pickettii 12D 8018662 YP_002980996.1 CDS Rpic12D_1028 NC_012856.1 1080134 1080964 R PFAM: integrase catalytic region; KEGG: mex:Mext_3531 integrase catalytic region; Integrase catalytic subunit complement(1080134..1080964) Ralstonia pickettii 12D 8018663 YP_002980997.1 CDS Rpic12D_1031 NC_012856.1 1082224 1082787 R PFAM: protein of unknown function DUF924; KEGG: bur:Bcep18194_A4367 hypothetical protein; hypothetical protein complement(1082224..1082787) Ralstonia pickettii 12D 8018666 YP_002980998.1 CDS Rpic12D_1032 NC_012856.1 1082829 1083098 R KEGG: pap:PSPA7_2235 hypothetical protein; hypothetical protein complement(1082829..1083098) Ralstonia pickettii 12D 8018667 YP_002980999.1 CDS Rpic12D_1033 NC_012856.1 1083131 1084507 R PFAM: aldehyde Dehydrogenase; KEGG: lsp:Bsph_1280 aldehyde dehydrogenase; aldehyde dehydrogenase complement(1083131..1084507) Ralstonia pickettii 12D 8018668 YP_002981000.1 CDS Rpic12D_1034 NC_012856.1 1084573 1085346 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bte:BTH_I2817 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(1084573..1085346) Ralstonia pickettii 12D 8018669 YP_002981001.1 CDS Rpic12D_1035 NC_012856.1 1085459 1086370 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pau:PA14_26880 LysR family transcriptional regulator; LysR family transcriptional regulator 1085459..1086370 Ralstonia pickettii 12D 8018670 YP_002981002.1 CDS Rpic12D_1037 NC_012856.1 1087131 1088168 D PFAM: transposase IS116/IS110/IS902 family protein; transposase IS111A/IS1328/IS1533; KEGG: bja:blr5195 transposase; transposase IS116/IS110/IS902 family protein 1087131..1088168 Ralstonia pickettii 12D 8018672 YP_002981003.1 CDS Rpic12D_1038 NC_012856.1 1089023 1089931 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bmj:BMULJ_03358 LysR family transcriptional regulator; LysR family transcriptional regulator 1089023..1089931 Ralstonia pickettii 12D 8018673 YP_002981004.1 CDS Rpic12D_1039 NC_012856.1 1090314 1091294 D PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: xfa:XF1743 esterase; alpha/beta hydrolase 1090314..1091294 Ralstonia pickettii 12D 8018674 YP_002981005.1 CDS Rpic12D_1040 NC_012856.1 1091343 1092491 D PFAM: extracellular ligand-binding receptor; KEGG: rso:RSc1879 amino acids-binding transmembrane protein; extracellular ligand-binding receptor 1091343..1092491 Ralstonia pickettii 12D 8018675 YP_002981006.1 CDS Rpic12D_1041 NC_012856.1 1092563 1093348 R PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; KEGG: rme:Rmet_3364 IstB-like ATP-binding protein; IstB domain-containing protein ATP-binding protein complement(1092563..1093348) Ralstonia pickettii 12D 8018676 YP_002981007.1 CDS Rpic12D_1042 NC_012856.1 1093338 1094864 R PFAM: integrase catalytic region; KEGG: rme:Rmet_3365 integrase, catalytic region; Integrase catalytic subunit complement(1093338..1094864) Ralstonia pickettii 12D 8018677 YP_002981008.1 CDS Rpic12D_1043 NC_012856.1 1095034 1095315 D hypothetical protein 1095034..1095315 Ralstonia pickettii 12D 8018678 YP_002981009.1 CDS Rpic12D_1045 NC_012856.1 1096679 1098442 R PFAM: UvrD/REP helicase; KEGG: saq:Sare_4120 UvrD/REP helicase; UvrD/REP helicase complement(1096679..1098442) Ralstonia pickettii 12D 8018680 YP_002981010.1 CDS Rpic12D_1046 NC_012856.1 1098686 1099552 R hypothetical protein complement(1098686..1099552) Ralstonia pickettii 12D 8018681 YP_002981011.1 CDS Rpic12D_1047 NC_012856.1 1099741 1100772 R hypothetical protein complement(1099741..1100772) Ralstonia pickettii 12D 8018682 YP_002981012.1 CDS Rpic12D_1048 NC_012856.1 1100810 1101046 R KEGG: glo:Glov_1426 hypothetical protein; hypothetical protein complement(1100810..1101046) Ralstonia pickettii 12D 8018683 YP_002981013.1 CDS Rpic12D_1049 NC_012856.1 1101959 1102999 R KEGG: dps:DP1078 hypothetical protein; hypothetical protein complement(1101959..1102999) Ralstonia pickettii 12D 8018684 YP_002981014.1 CDS Rpic12D_1050 NC_012856.1 1103234 1104160 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RSc1110 transcriptional regulatory DNA-binding transcription regulator protein; LysR family transcriptional regulator complement(1103234..1104160) Ralstonia pickettii 12D 8018686 YP_002981015.1 CDS Rpic12D_1051 NC_012856.1 1104253 1105356 D PFAM: conserved hypothetical protein; KEGG: rso:RSc1111 hypothetical protein; hypothetical protein 1104253..1105356 Ralstonia pickettii 12D 8018687 YP_002981016.1 CDS Rpic12D_1052 NC_012856.1 1105504 1106238 D PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: rso:RSc1113 hypothetical protein; hypothetical protein 1105504..1106238 Ralstonia pickettii 12D 8018688 YP_002981017.1 CDS Rpic12D_1053 NC_012856.1 1106634 1106963 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rso:RSc1114 ferredoxin protein; 4Fe-4S ferredoxin complement(1106634..1106963) Ralstonia pickettii 12D 8018691 YP_002981018.1 CDS Rpic12D_1054 NC_012856.1 1107142 1108836 R TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: rso:RSc1115 single-stranded-DNA-specific exonuclease protein; single-stranded-DNA-specific exonuclease RecJ complement(1107142..1108836) Ralstonia pickettii 12D 8018692 YP_002981019.1 CDS Rpic12D_1055 NC_012856.1 1108849 1109928 R KEGG: rso:RSc1116 signal peptide protein; signal peptide protein complement(1108849..1109928) Ralstonia pickettii 12D 8018693 YP_002981020.1 CDS Rpic12D_1056 NC_012856.1 1110000 1111250 D TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: rso:RSc1117 lipoprotein releasing system transmembrane; lipoprotein releasing system transmembrane protein LolC/E family 1110000..1111250 Ralstonia pickettii 12D 8018694 YP_002981021.1 CDS Rpic12D_1057 NC_012856.1 1111243 1111971 D KEGG: rso:RSc1118 lipoprotein releasing system ATP-binding ABC transporter; TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter; SMART: AAA ATPase; lipoprotein releasing system, ATP-binding protein 1111243..1111971 Ralstonia pickettii 12D 8018695 YP_002981022.1 CDS Rpic12D_1058 NC_012856.1 1112056 1112868 D PFAM: TatD-related deoxyribonuclease; KEGG: rso:RSc1119 deoxyribonuclease protein; TatD-like deoxyribonuclease 1112056..1112868 Ralstonia pickettii 12D 8018696 YP_002981023.1 CDS Rpic12D_1059 NC_012856.1 1112878 1115397 D TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; beta-lactamase domain protein; KEGG: rso:RSc1120 transporter DNA uptake transmembrane protein; DNA internalization-like competence protein ComEC/Rec2 1112878..1115397 Ralstonia pickettii 12D 8018697 YP_002981024.1 CDS Rpic12D_1060 NC_012856.1 1115502 1116986 D PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: rso:RSc1121 hypothetical protein; hypothetical protein 1115502..1116986 Ralstonia pickettii 12D 8018698 YP_002981025.1 CDS Rpic12D_1061 NC_012856.1 1117061 1118011 D PFAM: protein of unknown function DUF403; KEGG: rso:RSc1122 hypothetical protein; hypothetical protein 1117061..1118011 Ralstonia pickettii 12D 8018699 YP_002981026.1 CDS Rpic12D_1062 NC_012856.1 1118069 1118914 D PFAM: transglutaminase domain protein; transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: rso:RSc1123 hypothetical protein; transglutaminase domain-containing protein 1118069..1118914 Ralstonia pickettii 12D 8018700 YP_002981027.1 CDS Rpic12D_1063 NC_012856.1 1119002 1119904 D KEGG: rso:RSc1124 hypothetical protein; hypothetical protein 1119002..1119904 Ralstonia pickettii 12D 8018701 YP_002981028.1 CDS Rpic12D_1064 NC_012856.1 1119922 1120743 D PFAM: alpha/beta hydrolase fold; KEGG: rso:RSc1125 hydrolase protein; alpha/beta hydrolase fold protein 1119922..1120743 Ralstonia pickettii 12D 8018702 YP_002981029.1 CDS pyrG NC_012856.1 1120834 1122495 D CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 1120834..1122495 Ralstonia pickettii 12D 8018703 YP_002981030.1 CDS Rpic12D_1066 NC_012856.1 1122517 1123371 D catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 1122517..1123371 Ralstonia pickettii 12D 8018704 YP_002981031.1 CDS Rpic12D_1067 NC_012856.1 1123462 1123752 D PFAM: protein of unknown function DUF1330; KEGG: rso:RSc1128 hypothetical protein; hypothetical protein 1123462..1123752 Ralstonia pickettii 12D 8018705 YP_002981032.1 CDS eno NC_012856.1 1123807 1125090 D enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 1123807..1125090 Ralstonia pickettii 12D 8018706 YP_002981033.1 CDS ftsB NC_012856.1 1125143 1125517 D forms a complex with FtsL and FtsQ; colocalizes to the septal region of the dividing cell; membrane protein; cell division protein FtsB 1125143..1125517 Ralstonia pickettii 12D 8018707 YP_002981034.1 CDS Rpic12D_1070 NC_012856.1 1125574 1125987 R KEGG: rso:RSc1131 hypothetical protein; hypothetical protein complement(1125574..1125987) Ralstonia pickettii 12D 8018708 YP_002981035.1 CDS Rpic12D_1071 NC_012856.1 1126093 1127106 R PFAM: Hsp33 protein; KEGG: rso:RSc1132 redox regulated molecular chaperone heat-shock-like protein; Hsp33 protein complement(1126093..1127106) Ralstonia pickettii 12D 8018709 YP_002981036.1 CDS Rpic12D_1072 NC_012856.1 1127103 1127630 R KEGG: rso:RSc1133 hypothetical protein; hypothetical protein complement(1127103..1127630) Ralstonia pickettii 12D 8018710 YP_002981037.1 CDS Rpic12D_1073 NC_012856.1 1127704 1128588 D PFAM: protein of unknown function DUF455; KEGG: rso:RSc1134 hypothetical protein; hypothetical protein 1127704..1128588 Ralstonia pickettii 12D 8018711 YP_002981038.1 CDS Rpic12D_1074 NC_012856.1 1128668 1129585 D PFAM: alpha/beta hydrolase fold; KEGG: rso:RSc1135 hydrolase protein; alpha/beta hydrolase fold protein 1128668..1129585 Ralstonia pickettii 12D 8018712 YP_002981039.1 CDS Rpic12D_1075 NC_012856.1 1129594 1129983 R PFAM: thiol-disulphide oxidoreductase DCC; KEGG: rso:RSc1136 hypothetical protein; putative thiol-disulfide oxidoreductase DCC complement(1129594..1129983) Ralstonia pickettii 12D 8018713 YP_002981040.1 CDS Rpic12D_1076 NC_012856.1 1129980 1130525 R KEGG: rso:RSc1137 hypothetical protein; hypothetical protein complement(1129980..1130525) Ralstonia pickettii 12D 8018714 YP_002981041.1 CDS Rpic12D_1077 NC_012856.1 1130533 1131612 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rso:RSc1139 thioredoxin reductase oxidoreductase protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(1130533..1131612) Ralstonia pickettii 12D 8018715 YP_002981042.1 CDS Rpic12D_1078 NC_012856.1 1131763 1132623 D PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: rso:RSc1140 hypothetical protein; PHP domain-containing protein 1131763..1132623 Ralstonia pickettii 12D 8018716 YP_002981043.1 CDS Rpic12D_1079 NC_012856.1 1132637 1133260 D TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: rso:RSc1141 hypothetical protein; Sua5/YciO/YrdC/YwlC family protein 1132637..1133260 Ralstonia pickettii 12D 8018717 YP_002981044.1 CDS Rpic12D_1080 NC_012856.1 1133327 1133992 D PFAM: peptidase M50; KEGG: reu:Reut_A1102 peptidase M50; peptidase M50 1133327..1133992 Ralstonia pickettii 12D 8018718 YP_002981045.1 CDS Rpic12D_1081 NC_012856.1 1134014 1135216 D catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 1134014..1135216 Ralstonia pickettii 12D 8018719 YP_002981046.1 CDS Rpic12D_1082 NC_012856.1 1135227 1135793 D PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: rso:RSc1144 hypothetical protein; type 12 methyltransferase 1135227..1135793 Ralstonia pickettii 12D 8018720 YP_002981047.1 CDS Rpic12D_1083 NC_012856.1 1135912 1136796 D catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 1135912..1136796 Ralstonia pickettii 12D 8018721 YP_002981048.1 CDS Rpic12D_1084 NC_012856.1 1136858 1138054 D PFAM: NlpBDapX family lipoprotein; KEGG: rso:RSc1146 hypothetical protein; NlpBDapX family lipoprotein 1136858..1138054 Ralstonia pickettii 12D 8018722 YP_002981049.1 CDS Rpic12D_1085 NC_012856.1 1138089 1138874 D PFAM: beta-lactamase domain protein; KEGG: rso:RSc1147 hypothetical protein; beta-lactamase domain-containing protein 1138089..1138874 Ralstonia pickettii 12D 8018723 YP_002981050.1 CDS Rpic12D_1086 NC_012856.1 1139514 1140743 R PFAM: cupin; SMART: transcription factor jumonji jmjC domain protein; KEGG: rso:RSc1148 hypothetical protein; cupin complement(1139514..1140743) Ralstonia pickettii 12D 8018724 YP_002981051.1 CDS Rpic12D_1087 NC_012856.1 1140755 1141282 D KEGG: rso:RSc1149 fkbp-type peptidyl-prolyl cis-trans isomerase (rotamase) protein; fkbp-type peptidyl-prolyl cis-trans isomerase 1140755..1141282 Ralstonia pickettii 12D 8018725 YP_002981052.1 CDS Rpic12D_1088 NC_012856.1 1141330 1142406 R KEGG: rso:RSc1150 hypothetical protein; hypothetical protein complement(1141330..1142406) Ralstonia pickettii 12D 8018726 YP_002981053.1 CDS Rpic12D_1089 NC_012856.1 1142412 1145060 R This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS complement(1142412..1145060) Ralstonia pickettii 12D 8018727 YP_002981054.1 CDS Rpic12D_1090 NC_012856.1 1145158 1146054 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RSc1152 transcription regulator protein; LysR family transcriptional regulator complement(1145158..1146054) Ralstonia pickettii 12D 8018728 YP_002981055.1 CDS Rpic12D_1091 NC_012856.1 1146293 1148149 D PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; SMART: chemotaxis sensory transducer; KEGG: rso:RSc1155 methyl-accepting chemotaxis transducer transmembrane protein; Cache sensor-containing methyl-accepting chemotaxis sensory transducer 1146293..1148149 Ralstonia pickettii 12D 8018729 YP_002981056.1 CDS Rpic12D_1092 NC_012856.1 1148170 1149987 D PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: rso:RSc1156 methyl-accepting chemotaxis transducer transmembrane protein; methyl-accepting chemotaxis sensory transducer 1148170..1149987 Ralstonia pickettii 12D 8018730 YP_002981057.1 CDS Rpic12D_1093 NC_012856.1 1150000 1150704 R PFAM: MOSC domain containing protein; 3-alpha domain protein; KEGG: rso:RSc1157 hypothetical protein; MOSC domain-containing protein complement(1150000..1150704) Ralstonia pickettii 12D 8018731 YP_002981058.1 CDS Rpic12D_1094 NC_012856.1 1150701 1151405 R Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; glutamine amidotransferase complement(1150701..1151405) Ralstonia pickettii 12D 8018732 YP_002981059.1 CDS Rpic12D_1095 NC_012856.1 1151722 1152534 R PFAM: inositol monophosphatase; KEGG: rso:RSc1160 inositol monophosphatase; inositol-phosphate phosphatase complement(1151722..1152534) Ralstonia pickettii 12D 8018733 YP_002981060.1 CDS Rpic12D_1096 NC_012856.1 1152668 1153552 D TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: rso:RSc1161 tRNA/rRNA methyltransferase protein; TrmH family RNA methyltransferase 1152668..1153552 Ralstonia pickettii 12D 8018734 YP_002981061.1 CDS Rpic12D_1097 NC_012856.1 1153700 1154446 D TIGRFAM: serine O-acetyltransferase; KEGG: rso:RSc1162 O-acetylserine synthase; serine O-acetyltransferase 1153700..1154446 Ralstonia pickettii 12D 8018735 YP_002981062.1 CDS Rpic12D_1098 NC_012856.1 1154469 1155287 R catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine; UDP-2,3-diacylglucosamine hydrolase complement(1154469..1155287) Ralstonia pickettii 12D 8018736 YP_002981063.1 CDS Rpic12D_1099 NC_012856.1 1155284 1155790 R PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: rso:RSc1164 peptidyl-prolyl cis-trans isomerase B; cyclophilin type peptidyl-prolyl cis-trans isomerase complement(1155284..1155790) Ralstonia pickettii 12D 8018737 YP_002981064.1 CDS Rpic12D_1100 NC_012856.1 1155821 1156402 R PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: rso:RSc1165 peptidyl-prolyl cis-trans isomerase A; cyclophilin type peptidyl-prolyl cis-trans isomerase complement(1155821..1156402) Ralstonia pickettii 12D 8018738 YP_002981065.1 CDS Rpic12D_1101 NC_012856.1 1156455 1157105 R SMART: Tetratricopeptide domain protein; KEGG: rso:RSc1166 signal peptide protein; hypothetical protein complement(1156455..1157105) Ralstonia pickettii 12D 8018739 YP_002981066.1 CDS cysS NC_012856.1 1157359 1158750 D catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 1157359..1158750 Ralstonia pickettii 12D 8018740 YP_002981067.1 CDS Rpic12D_1103 NC_012856.1 1158747 1159619 D PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein; KEGG: rso:RSc1168 hypothetical protein; HhH-GPD family protein 1158747..1159619 Ralstonia pickettii 12D 8018741 YP_002981068.1 CDS Rpic12D_1104 NC_012856.1 1159706 1160674 D catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 1159706..1160674 Ralstonia pickettii 12D 8018742 YP_002981069.1 CDS Rpic12D_1105 NC_012856.1 1160643 1162061 D TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; protein of unkown function DUF1946 PP-loop ATpase; KEGG: rso:RSc1170 cell cycle protein; tRNA(Ile)-lysidine synthetase 1160643..1162061 Ralstonia pickettii 12D 8018743 YP_002981070.1 CDS Rpic12D_1106 NC_012856.1 1162158 1163408 D catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 1162158..1163408 Ralstonia pickettii 12D 8018744 YP_002981071.1 CDS Rpic12D_1107 NC_012856.1 1163839 1164633 R Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase complement(1163839..1164633) Ralstonia pickettii 12D 8018746 YP_002981072.1 CDS Rpic12D_1108 NC_012856.1 1164943 1166829 D PFAM: extracellular solute-binding protein family 5; KEGG: rso:RSc1173 substrate-binding periplasmic (PBP) ABC transporter protein; family 5 extracellular solute-binding protein 1164943..1166829 Ralstonia pickettii 12D 8018747 YP_002981073.1 CDS Rpic12D_1109 NC_012856.1 1166846 1167898 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc1174 transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein 1166846..1167898 Ralstonia pickettii 12D 8018748 YP_002981074.1 CDS Rpic12D_1110 NC_012856.1 1167913 1169037 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc1175 transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein 1167913..1169037 Ralstonia pickettii 12D 8018749 YP_002981075.1 CDS Rpic12D_1111 NC_012856.1 1169034 1170689 D PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter; SMART: AAA ATPase; KEGG: rso:RSc1176 ABC transporter ATP-binding protein; ABC transporter 1169034..1170689 Ralstonia pickettii 12D 8018750 YP_002981076.1 CDS Rpic12D_1112 NC_012856.1 1170931 1171578 D PFAM: NLP/P60 protein; KEGG: rso:RSc1177 transmembrane protein; NLP/P60 protein 1170931..1171578 Ralstonia pickettii 12D 8018751 YP_002981077.1 CDS Rpic12D_1113 NC_012856.1 1171654 1172610 R PFAM: Patatin; KEGG: rso:RSc1178 lipoprotein transmembrane; patatin complement(1171654..1172610) Ralstonia pickettii 12D 8018752 YP_002981078.1 CDS gltX NC_012856.1 1172816 1174213 D Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 1172816..1174213 Ralstonia pickettii 12D 8018753 YP_002981079.1 CDS Rpic12D_1115 NC_012856.1 1174856 1176202 R TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: rso:RSc1180 inner membrane transmembrane protein; MATE efflux family protein complement(1174856..1176202) Ralstonia pickettii 12D 8018757 YP_002981080.1 CDS Rpic12D_1116 NC_012856.1 1176222 1178012 R KEGG: rso:RSc1181 inner membrane transmembrane protein; inner membrane transmembrane protein complement(1176222..1178012) Ralstonia pickettii 12D 8018758 YP_002981081.1 CDS rpmE2 NC_012856.1 1178183 1178443 R RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 complement(1178183..1178443) Ralstonia pickettii 12D 8018759 YP_002981082.1 CDS Rpic12D_1118 NC_012856.1 1178647 1179204 R KEGG: rso:RSc1183 signal peptide protein; signal peptide protein complement(1178647..1179204) Ralstonia pickettii 12D 8018760 YP_002981083.1 CDS Rpic12D_1119 NC_012856.1 1179201 1180067 R PFAM: protein of unknown function DUF980; KEGG: rso:RSc1184 hypothetical protein; hypothetical protein complement(1179201..1180067) Ralstonia pickettii 12D 8018761 YP_002981084.1 CDS Rpic12D_1120 NC_012856.1 1180129 1180788 R PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: rso:RSc1185 transcription regulator protein; two component LuxR family transcriptional regulator complement(1180129..1180788) Ralstonia pickettii 12D 8018762 YP_002981085.1 CDS Rpic12D_1121 NC_012856.1 1181167 1181790 D hypothetical protein 1181167..1181790 Ralstonia pickettii 12D 8018763 YP_002981086.1 CDS Rpic12D_1122 NC_012856.1 1181877 1183250 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: rso:RSc1186 sigma-54 interacting transcription regulator protein; Fis family sigma-54 specific transcriptional regulator complement(1181877..1183250) Ralstonia pickettii 12D 8018764 YP_002981087.1 CDS rho NC_012856.1 1183518 1184780 R An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho complement(1183518..1184780) Ralstonia pickettii 12D 8018765 YP_002981088.1 CDS Rpic12D_1124 NC_012856.1 1184970 1185296 R TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: rso:RSc1188 thioredoxin 1 (redox factor) protein; thioredoxin complement(1184970..1185296) Ralstonia pickettii 12D 8018766 YP_002981089.1 CDS Rpic12D_1125 NC_012856.1 1185514 1188357 D KEGG: rso:RSc1189 hypothetical protein; hypothetical protein 1185514..1188357 Ralstonia pickettii 12D 8018767 YP_002981090.1 CDS Rpic12D_1126 NC_012856.1 1188354 1191875 D PFAM: UvrD/REP helicase; KEGG: rso:RSc1190 hypothetical protein; UvrD/REP helicase 1188354..1191875 Ralstonia pickettii 12D 8018768 YP_002981091.1 CDS Rpic12D_1127 NC_012856.1 1192153 1194354 D catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 1192153..1194354 Ralstonia pickettii 12D 8018770 YP_002981092.1 CDS Rpic12D_1128 NC_012856.1 1194440 1194787 D PFAM: conserved hypothetical protein; KEGG: rso:RSc1192 hypothetical protein; hypothetical protein 1194440..1194787 Ralstonia pickettii 12D 8018771 YP_002981093.1 CDS Rpic12D_1129 NC_012856.1 1194811 1195110 D PFAM: antibiotic biosynthesis monooxygenase; KEGG: kra:Krad_2675 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 1194811..1195110 Ralstonia pickettii 12D 8018772 YP_002981094.1 CDS recR NC_012856.1 1195110 1195730 D involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 1195110..1195730 Ralstonia pickettii 12D 8018773 YP_002981095.1 CDS Rpic12D_1131 NC_012856.1 1195745 1197085 R PFAM: carbohydrate-selective porin OprB; KEGG: rso:RSc1195 hypothetical protein; carbohydrate-selective porin OprB complement(1195745..1197085) Ralstonia pickettii 12D 8018774 YP_002981096.1 CDS Rpic12D_1132 NC_012856.1 1197297 1198211 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RSc1196 DNA-binding transcriptional regulatory transcription regulator protein; LysR family transcriptional regulator 1197297..1198211 Ralstonia pickettii 12D 8018775 YP_002981097.1 CDS Rpic12D_1133 NC_012856.1 1198240 1199448 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rso:RSc1197 hypothetical protein; formyl-CoA transferase 1198240..1199448 Ralstonia pickettii 12D 8018776 YP_002981098.1 CDS Rpic12D_1134 NC_012856.1 1199538 1200587 D PFAM: NMT1/THI5 like domain protein; SMART: extracellular solute-binding protein family 3; KEGG: rso:RSc1198 signal peptide protein; NMT1/THI5 like domain-containing protein 1199538..1200587 Ralstonia pickettii 12D 8018777 YP_002981099.1 CDS Rpic12D_1135 NC_012856.1 1200652 1201464 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RSc1199 ABC transporter ATP-binding protein; ABC transporter 1200652..1201464 Ralstonia pickettii 12D 8018778 YP_002981100.1 CDS Rpic12D_1136 NC_012856.1 1201488 1202279 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc1200 transmembrane permease ABC transporter protein; binding-protein-dependent transport system inner membrane protein 1201488..1202279 Ralstonia pickettii 12D 8018779 YP_002981101.1 CDS Rpic12D_1137 NC_012856.1 1202371 1203000 D PFAM: regulatory protein TetR; KEGG: rso:RSc1201 transcription regulator protein; TetR family transcriptional regulator 1202371..1203000 Ralstonia pickettii 12D 8018780 YP_002981102.1 CDS Rpic12D_1138 NC_012856.1 1203101 1204207 D PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: rso:RSc1202 flavoprotein NADH-dependent oxidoreductase; NADH:flavin oxidoreductase 1203101..1204207 Ralstonia pickettii 12D 8018781 YP_002981103.1 CDS Rpic12D_1139 NC_012856.1 1204282 1205256 R PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: rso:RSc1203 oxidoreductase protein; alcohol dehydrogenase zinc-binding domain-containing protein complement(1204282..1205256) Ralstonia pickettii 12D 8018782 YP_002981104.1 CDS surE NC_012856.1 1205468 1206223 D catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 1205468..1206223 Ralstonia pickettii 12D 8018783 YP_002981105.1 CDS Rpic12D_1141 NC_012856.1 1206239 1207183 D KEGG: rso:RSc1205 hypothetical protein; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 1206239..1207183 Ralstonia pickettii 12D 8018784 YP_002981106.1 CDS Rpic12D_1142 NC_012856.1 1207185 1208009 D PFAM: peptidase M23; peptidoglycan-binding LysM; SMART: peptidoglycan-binding LysM; KEGG: rso:RSc1206 lipoprotein NlpD/LppB-like protein; peptidase M23 1207185..1208009 Ralstonia pickettii 12D 8018785 YP_002981107.1 CDS Rpic12D_1143 NC_012856.1 1208018 1209154 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls a regulon of genes required for protection against external stresses; RNA polymerase sigma factor RpoS 1208018..1209154 Ralstonia pickettii 12D 8018786 YP_002981108.1 CDS Rpic12D_1144 NC_012856.1 1209187 1210050 R PFAM: endonuclease/exonuclease/phosphatase; KEGG: rso:RSc1208 hypothetical protein; endonuclease/exonuclease/phosphatase complement(1209187..1210050) Ralstonia pickettii 12D 8018787 YP_002981109.1 CDS rumA NC_012856.1 1210073 1211563 D in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; 23S rRNA 5-methyluridine methyltransferase 1210073..1211563 Ralstonia pickettii 12D 8018788 YP_002981110.1 CDS Rpic12D_1146 NC_012856.1 1211658 1212359 R PFAM: protein of unknown function UPF0005; KEGG: rso:RSc1210 hypothetical protein; hypothetical protein complement(1211658..1212359) Ralstonia pickettii 12D 8018789 YP_002981111.1 CDS ndk NC_012856.1 1212729 1213154 D catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 1212729..1213154 Ralstonia pickettii 12D 8018790 YP_002981112.1 CDS Rpic12D_1148 NC_012856.1 1213197 1214348 D TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: rso:RSc1212 hypothetical protein; radical SAM enzyme, Cfr family 1213197..1214348 Ralstonia pickettii 12D 8018791 YP_002981113.1 CDS Rpic12D_1149 NC_012856.1 1214345 1215142 D KEGG: rso:RSc1213 type 4 fimbrial biogenesis protein; TIGRFAM: type IV pilus biogenesis/stability protein PilW; PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; type IV pilus biogenesis/stability protein PilW 1214345..1215142 Ralstonia pickettii 12D 8018792 YP_002981114.1 CDS Rpic12D_1150 NC_012856.1 1215135 1216217 D SMART: helix-turn-helix domain protein; KEGG: rso:RSc1214 hypothetical protein; XRE family transcriptional regulator 1215135..1216217 Ralstonia pickettii 12D 8018793 YP_002981115.1 CDS ispG NC_012856.1 1216268 1217554 D catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1216268..1217554 Ralstonia pickettii 12D 8018794 YP_002981116.1 CDS hisS NC_012856.1 1217622 1218974 D catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 1217622..1218974 Ralstonia pickettii 12D 8018795 YP_002981117.1 CDS Rpic12D_1153 NC_012856.1 1219041 1219676 D KEGG: rso:RSc1217 hypothetical protein; hypothetical protein 1219041..1219676 Ralstonia pickettii 12D 8018796 YP_002981118.1 CDS Rpic12D_1154 NC_012856.1 1219726 1220904 D KEGG: rso:RSc1218 lipoprotein transmembrane; TIGRFAM: outer membrane assembly lipoprotein YfgL; PFAM: Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone; outer membrane assembly lipoprotein YfgL 1219726..1220904 Ralstonia pickettii 12D 8018797 YP_002981119.1 CDS engA NC_012856.1 1221099 1222442 D EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 1221099..1222442 Ralstonia pickettii 12D 8018798 YP_002981120.1 CDS hfq NC_012856.1 1222742 1222981 D Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq 1222742..1222981 Ralstonia pickettii 12D 8018799 YP_002981121.1 CDS Rpic12D_1157 NC_012856.1 1223055 1224308 D TIGRFAM: GTP-binding proten HflX; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: rso:RSc1221 hypothetical protein; GTP-binding proten HflX 1223055..1224308 Ralstonia pickettii 12D 8018800 YP_002981122.1 CDS Rpic12D_1158 NC_012856.1 1224313 1225740 D KEGG: rso:RSc1222 hypothetical protein; TIGRFAM: HflK protein; PFAM: band 7 protein; SMART: band 7 protein; HflK protein 1224313..1225740 Ralstonia pickettii 12D 8018801 YP_002981123.1 CDS Rpic12D_1159 NC_012856.1 1225753 1226667 D KEGG: rso:RSc1223 serine protease transmembrane protein; TIGRFAM: HflC protein; PFAM: band 7 protein; SMART: band 7 protein; HflC protein 1225753..1226667 Ralstonia pickettii 12D 8018802 YP_002981124.1 CDS Rpic12D_1160 NC_012856.1 1226743 1226943 D KEGG: rso:RSc1224 hypothetical protein; hypothetical protein 1226743..1226943 Ralstonia pickettii 12D 8018803 YP_002981125.1 CDS hisZ NC_012856.1 1227002 1228165 D May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase regulatory subunit 1227002..1228165 Ralstonia pickettii 12D 8018804 YP_002981126.1 CDS Rpic12D_1162 NC_012856.1 1228261 1229601 D catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 1228261..1229601 Ralstonia pickettii 12D 8018805 YP_002981127.1 CDS Rpic12D_1163 NC_012856.1 1229719 1230291 D PFAM: phosphoribosyltransferase; KEGG: rso:RSc1227 nucleotide phosphoribosyltransferase protein; phosphoribosyltransferase 1229719..1230291 Ralstonia pickettii 12D 8018806 YP_002981128.1 CDS Rpic12D_1164 NC_012856.1 1230867 1233413 D KEGG: rso:RSc1228 exoribonuclease RNase R; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; PFAM: ribonuclease II; Ribonuclease B OB region domain; RNA binding S1 domain protein; SMART: RNA binding S1 domain protein; Cold shock protein; ribonuclease R 1230867..1233413 Ralstonia pickettii 12D 8018808 YP_002981129.1 CDS Rpic12D_1165 NC_012856.1 1233462 1234214 D TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: rso:RSc1229 tRNA/rRNA methyltransferase protein; TrmH family RNA methyltransferase 1233462..1234214 Ralstonia pickettii 12D 8018809 YP_002981130.1 CDS Rpic12D_1166 NC_012856.1 1234214 1234963 D PFAM: Silent information regulator protein Sir2; KEGG: rso:RSc1230 hypothetical protein; silent information regulator protein Sir2 1234214..1234963 Ralstonia pickettii 12D 8018810 YP_002981131.1 CDS Rpic12D_1167 NC_012856.1 1234976 1235935 R KEGG: rso:RSc1231 transaldolase B; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase B complement(1234976..1235935) Ralstonia pickettii 12D 8018811 YP_002981132.1 CDS Rpic12D_1168 NC_012856.1 1236086 1236772 D Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 1236086..1236772 Ralstonia pickettii 12D 8018812 YP_002981133.1 CDS Rpic12D_1169 NC_012856.1 1236914 1237189 R PFAM: Fe(II) trafficking protein YggX; KEGG: rso:RSc1235 hypothetical protein; hypothetical protein complement(1236914..1237189) Ralstonia pickettii 12D 8018813 YP_002981134.1 CDS Rpic12D_1170 NC_012856.1 1237297 1238694 R catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase complement(1237297..1238694) Ralstonia pickettii 12D 8018814 YP_002981135.1 CDS Rpic12D_1171 NC_012856.1 1238835 1242767 D KEGG: rso:RSc1251 ATP-dependent RNA helicase protein; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase-associated domain protein; protein of unknown function DUF1605; helicase domain protein; SMART: DEAD-like helicases ; helicase domain protein; AAA ATPase; ATP-dependent helicase HrpA 1238835..1242767 Ralstonia pickettii 12D 8018815 YP_002981136.1 CDS Rpic12D_1172 NC_012856.1 1242884 1243879 D PFAM: cytochrome d1 heme region; KEGG: rso:RSc1252 signal peptide protein; cytochrome d1 heme subunit 1242884..1243879 Ralstonia pickettii 12D 8018816 YP_002981137.1 CDS Rpic12D_1173 NC_012856.1 1243896 1244726 D PFAM: polysaccharide deacetylase; KEGG: rso:RSc1253 lipoprotein signal peptide; polysaccharide deacetylase 1243896..1244726 Ralstonia pickettii 12D 8018817 YP_002981138.1 CDS Rpic12D_1174 NC_012856.1 1244728 1245702 D PFAM: fatty acid hydroxylase; KEGG: rso:RSc1254 hypothetical protein; fatty acid hydroxylase 1244728..1245702 Ralstonia pickettii 12D 8018818 YP_002981139.1 CDS Rpic12D_1175 NC_012856.1 1245780 1246637 D KEGG: rso:RSc1255 hypothetical protein; hypothetical protein 1245780..1246637 Ralstonia pickettii 12D 8018819 YP_002981140.1 CDS Rpic12D_1176 NC_012856.1 1246659 1247477 D PFAM: molybdopterin binding domain; KEGG: rso:RSc1256 hypothetical protein; molybdopterin binding domain-containing protein 1246659..1247477 Ralstonia pickettii 12D 8018820 YP_002981141.1 CDS Rpic12D_1177 NC_012856.1 1247494 1247970 R SMART: rhodanese; KEGG: rso:RSc1257 hypothetical protein; rhodanese domain-containing protein complement(1247494..1247970) Ralstonia pickettii 12D 8018821 YP_002981142.1 CDS Rpic12D_1178 NC_012856.1 1248106 1248210 R hypothetical protein complement(1248106..1248210) Ralstonia pickettii 12D 8018822 YP_002981143.1 CDS Rpic12D_1179 NC_012856.1 1248444 1249859 D TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: cti:RALTA_A1880 glutamine synthetase; glutamine synthetase 1248444..1249859 Ralstonia pickettii 12D 8018823 YP_002981144.1 CDS Rpic12D_1180 NC_012856.1 1250018 1250542 D KEGG: rso:RSc1259 signal peptide protein; signal peptide protein 1250018..1250542 Ralstonia pickettii 12D 8018824 YP_002981145.1 CDS Rpic12D_1181 NC_012856.1 1250550 1251749 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; KEGG: rso:RSc1260 nitrogen regulation(sensor protein kinase transcription regulator; signal transduction histidine kinase, nitrogen specific, NtrB 1250550..1251749 Ralstonia pickettii 12D 8018825 YP_002981146.1 CDS Rpic12D_1182 NC_012856.1 1251820 1253328 D KEGG: rso:RSc1261 nitrogen assimilation regulatory response regulator transcription regulator protein; TIGRFAM: nitrogen regulation protein NR(I); PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; nitrogen metabolism transcriptional regulator NtrC 1251820..1253328 Ralstonia pickettii 12D 8018826 YP_002981147.1 CDS Rpic12D_1183 NC_012856.1 1253443 1253772 R KEGG: rso:RSc1262 hypothetical protein; hypothetical protein complement(1253443..1253772) Ralstonia pickettii 12D 8018827 YP_002981148.1 CDS Rpic12D_1184 NC_012856.1 1253941 1254834 R TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; sucrose-6F-phosphate phosphohydrolase; KEGG: rso:RSc1263 hypothetical protein; HAD-superfamily hydrolase complement(1253941..1254834) Ralstonia pickettii 12D 8018828 YP_002981149.1 CDS Rpic12D_1185 NC_012856.1 1255032 1256348 D PFAM: extracellular solute-binding protein family 1; KEGG: rso:RSc1264 glycerol-3-phosphate-binding periplasmic lipoprotein signal peptide; family 1 extracellular solute-binding protein 1255032..1256348 Ralstonia pickettii 12D 8018829 YP_002981150.1 CDS Rpic12D_1186 NC_012856.1 1256425 1257306 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc1265 sn-glycerol-3-phosphate transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein 1256425..1257306 Ralstonia pickettii 12D 8018830 YP_002981151.1 CDS Rpic12D_1187 NC_012856.1 1257325 1258173 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc1266 sn-glycerol-3-phosphate transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein 1257325..1258173 Ralstonia pickettii 12D 8018831 YP_002981152.1 CDS ugpC NC_012856.1 1258184 1259281 D part of the UgpABCE glycerol-3-phosphate uptake system; glycerol-3-phosphate transporter ATP-binding subunit 1258184..1259281 Ralstonia pickettii 12D 8018832 YP_002981153.1 CDS ugpQ NC_012856.1 1259278 1260030 D hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol; induced when cells are starved for inorganic phosphate; glycerophosphodiester phosphodiesterase 1259278..1260030 Ralstonia pickettii 12D 8018833 YP_002981154.1 CDS sucA NC_012856.1 1260322 1263186 D SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 1260322..1263186 Ralstonia pickettii 12D 8018834 YP_002981155.1 CDS Rpic12D_1191 NC_012856.1 1263321 1264574 D component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase 1263321..1264574 Ralstonia pickettii 12D 8018835 YP_002981156.1 CDS Rpic12D_1192 NC_012856.1 1264642 1266078 D E3 component of 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 1264642..1266078 Ralstonia pickettii 12D 8018836 YP_002981157.1 CDS Rpic12D_1193 NC_012856.1 1266180 1267277 D PFAM: AFG1-family ATPase; KEGG: rso:RSc1272 hypothetical protein; AFG1 family ATPase 1266180..1267277 Ralstonia pickettii 12D 8018837 YP_002981158.1 CDS Rpic12D_1194 NC_012856.1 1267298 1268140 R KEGG: rso:RSc1273 lipoprotein; lipoprotein complement(1267298..1268140) Ralstonia pickettii 12D 8018838 YP_002981159.1 CDS Rpic12D_1195 NC_012856.1 1268317 1270860 D TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: rso:RSc1274 cation-transporting ATPase lipoprotein transmembrane; heavy metal translocating P-type ATPase 1268317..1270860 Ralstonia pickettii 12D 8018839 YP_002981160.1 CDS Rpic12D_1196 NC_012856.1 1270871 1271050 D TIGRFAM: cytochrome Oxidase maturation protein, cbb3-type; PFAM: cytochrome Oxidase maturation protein cbb3-type; KEGG: rso:RSc1275 signal peptide protein; cbb3-type cytochrome oxidase maturation protein 1270871..1271050 Ralstonia pickettii 12D 8018840 YP_002981161.1 CDS Rpic12D_1197 NC_012856.1 1271146 1272603 D CcoN; FixN; cbb3-type cytochrome C oxidase subunit I 1271146..1272603 Ralstonia pickettii 12D 8018841 YP_002981162.1 CDS Rpic12D_1198 NC_012856.1 1272614 1273297 D CcoO; FixO; cbb3-type cytochrome C oxidase subunit II 1272614..1273297 Ralstonia pickettii 12D 8018842 YP_002981163.1 CDS Rpic12D_1199 NC_012856.1 1273301 1273483 D KEGG: rso:RSc1278 signal peptide protein; signal peptide protein 1273301..1273483 Ralstonia pickettii 12D 8018843 YP_002981164.1 CDS Rpic12D_1200 NC_012856.1 1273496 1274419 D TIGRFAM: cytochrome C oxidase, cbb3-type, subunit III; PFAM: cytochrome C class I; KEGG: rso:RSc1279 cytochrome C oxidase subunit III; cbb3-type cytochrome c oxidase subunit III 1273496..1274419 Ralstonia pickettii 12D 8018844 YP_002981165.1 CDS Rpic12D_1201 NC_012856.1 1274416 1275879 D TIGRFAM: cytochrome C oxidase accessory protein CcoG; KEGG: rso:RSc1280 iron-sulfur 4Fe-4S ferredoxin transmembrane protein; cytochrome C oxidase accessory protein CcoG 1274416..1275879 Ralstonia pickettii 12D 8018845 YP_002981166.1 CDS Rpic12D_1202 NC_012856.1 1275906 1276133 D KEGG: rso:RSc1281 lipoprotein transmembrane; lipoprotein transmembrane 1275906..1276133 Ralstonia pickettii 12D 8018846 YP_002981167.1 CDS Rpic12D_1203 NC_012856.1 1276130 1276384 D KEGG: rso:RSc1282 hypothetical protein; hypothetical protein 1276130..1276384 Ralstonia pickettii 12D 8018847 YP_002981168.1 CDS Rpic12D_1204 NC_012856.1 1276406 1277134 R PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; cyclic nucleotide-binding; KEGG: rso:RSc1283 fumarate and nitrate reduction regulatory transcription regulator protein; Crp/Fnr family transcriptional regulator complement(1276406..1277134) Ralstonia pickettii 12D 8018848 YP_002981169.1 CDS Rpic12D_1205 NC_012856.1 1277314 1278057 D KEGG: rso:RSc1284 hypothetical protein; hypothetical protein 1277314..1278057 Ralstonia pickettii 12D 8018849 YP_002981170.1 CDS Rpic12D_1206 NC_012856.1 1278210 1279379 D TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: rso:RSc1285 hypothetical protein; chromosome segregation and condensation protein ScpB 1278210..1279379 Ralstonia pickettii 12D 8018850 YP_002981171.1 CDS Rpic12D_1207 NC_012856.1 1279470 1281254 D PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: rso:RSc1286 hypothetical protein; pseudouridine synthase 1279470..1281254 Ralstonia pickettii 12D 8018851 YP_002981172.1 CDS Rpic12D_1208 NC_012856.1 1281461 1281949 D in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 1281461..1281949 Ralstonia pickettii 12D 8018852 YP_002981173.1 CDS nusA NC_012856.1 1281946 1283421 D modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 1281946..1283421 Ralstonia pickettii 12D 8018853 YP_002981174.1 CDS infB NC_012856.1 1283484 1286378 D protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 1283484..1286378 Ralstonia pickettii 12D 8018854 YP_002981175.1 CDS rbfA NC_012856.1 1286506 1286877 D associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 1286506..1286877 Ralstonia pickettii 12D 8018855 YP_002981176.1 CDS truB NC_012856.1 1286879 1287835 D catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 1286879..1287835 Ralstonia pickettii 12D 8018856 YP_002981177.1 CDS Rpic12D_1213 NC_012856.1 1287901 1289457 R TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc1292 multidrug resistance B (translocase) transmembrane protein; EmrB/QacA subfamily drug resistance transporter complement(1287901..1289457) Ralstonia pickettii 12D 8018857 YP_002981178.1 CDS Rpic12D_1214 NC_012856.1 1289461 1290750 R PFAM: secretion protein HlyD family protein; KEGG: rso:RSc1293 multidrug resistance A (translocase) transmembrane protein; secretion protein HlyD family protein complement(1289461..1290750) Ralstonia pickettii 12D 8018858 YP_002981179.1 CDS Rpic12D_1215 NC_012856.1 1290812 1292341 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rso:RSc1294 outer membrane channel lipoprotein; NodT family RND efflux system outer membrane lipoprotein complement(1290812..1292341) Ralstonia pickettii 12D 8018859 YP_002981180.1 CDS Rpic12D_1216 NC_012856.1 1292410 1292859 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rso:RSc1295 transcription regulator protein; MarR family transcriptional regulator complement(1292410..1292859) Ralstonia pickettii 12D 8018860 YP_002981181.1 CDS Rpic12D_1217 NC_012856.1 1293179 1294999 D TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: rso:RSc1296 GTP-binding elongation factor protein; GTP-binding protein TypA 1293179..1294999 Ralstonia pickettii 12D 8018861 YP_002981182.1 CDS Rpic12D_1219 NC_012856.1 1295326 1296915 R SMART: rhodanese; KEGG: pol:Bpro_2041 rhodanese-like; rhodanese domain-containing protein complement(1295326..1296915) Ralstonia pickettii 12D 8018863 YP_002981183.1 CDS Rpic12D_1220 NC_012856.1 1297169 1298038 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bbr:BB1539 LysR family transcriptional regulator; LysR family transcriptional regulator 1297169..1298038 Ralstonia pickettii 12D 8018864 YP_002981184.1 CDS Rpic12D_1221 NC_012856.1 1298031 1298936 R PFAM: fatty acid hydroxylase; KEGG: reh:H16_A2293 C-5 sterol desaturase; fatty acid hydroxylase complement(1298031..1298936) Ralstonia pickettii 12D 8018865 YP_002981185.1 CDS Rpic12D_1222 NC_012856.1 1299083 1300192 D catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA; 3-hydroxyisobutyryl-CoA hydrolase 1299083..1300192 Ralstonia pickettii 12D 8018866 YP_002981186.1 CDS Rpic12D_1223 NC_012856.1 1300287 1300685 D KEGG: bvi:Bcep1808_7770 hypothetical protein; hypothetical protein 1300287..1300685 Ralstonia pickettii 12D 8018867 YP_002981187.1 CDS Rpic12D_1224 NC_012856.1 1300804 1301037 D hypothetical protein 1300804..1301037 Ralstonia pickettii 12D 8018868 YP_002981188.1 CDS Rpic12D_1227 NC_012856.1 1302045 1303208 R PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_B2696 hydrolase; alpha/beta hydrolase fold protein complement(1302045..1303208) Ralstonia pickettii 12D 8018871 YP_002981189.1 CDS Rpic12D_1228 NC_012856.1 1303323 1304240 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bxe:Bxe_C1390 LysR family transcriptional regulator; LysR family transcriptional regulator 1303323..1304240 Ralstonia pickettii 12D 8018872 YP_002981190.1 CDS Rpic12D_1229 NC_012856.1 1304662 1304934 D KEGG: rso:RS00827 hypothetical protein; hypothetical protein 1304662..1304934 Ralstonia pickettii 12D 8018873 YP_002981191.1 CDS Rpic12D_1230 NC_012856.1 1304941 1305879 R PFAM: protein of unknown function DUF159; KEGG: mpt:Mpe_A1934 hypothetical protein; hypothetical protein complement(1304941..1305879) Ralstonia pickettii 12D 8018874 YP_002981192.1 CDS Rpic12D_1231 NC_012856.1 1305929 1306177 R hypothetical protein complement(1305929..1306177) Ralstonia pickettii 12D 8018875 YP_002981193.1 CDS Rpic12D_1232 NC_012856.1 1306178 1307428 R KEGG: pst:PSPTO_1346 sensory box protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC sensor containing diguanylate cyclase complement(1306178..1307428) Ralstonia pickettii 12D 8018876 YP_002981194.1 CDS Rpic12D_1233 NC_012856.1 1307559 1308335 R PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: bav:BAV0352 signaling protein; diguanylate phosphodiesterase complement(1307559..1308335) Ralstonia pickettii 12D 8018877 YP_002981195.1 CDS Rpic12D_1234 NC_012856.1 1308824 1309135 R KEGG: bbt:BBta_3455 integrase/recombinase; integrase/recombinase complement(1308824..1309135) Ralstonia pickettii 12D 8018878 YP_002981196.1 CDS Rpic12D_1235 NC_012856.1 1309234 1310274 D TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase DuS; KEGG: rso:RSc1299 tRNA-dihydrouridine synthase A; tRNA-dihydrouridine synthase A 1309234..1310274 Ralstonia pickettii 12D 8018879 YP_002981197.1 CDS Rpic12D_1236 NC_012856.1 1310513 1310908 R KEGG: rso:RSc1301 hypothetical protein; hypothetical protein complement(1310513..1310908) Ralstonia pickettii 12D 8018881 YP_002981198.1 CDS Rpic12D_1237 NC_012856.1 1311040 1312770 D TIGRFAM: dipeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rso:RSc1302 hypothetical protein; hypothetical protein 1311040..1312770 Ralstonia pickettii 12D 8018882 YP_002981199.1 CDS Rpic12D_1238 NC_012856.1 1312793 1313104 D PFAM: cupin; KEGG: bxe:Bxe_C0481 hypothetical protein; cyclic nucleotide-binding protein 1312793..1313104 Ralstonia pickettii 12D 8018883 YP_002981200.1 CDS Rpic12D_1239 NC_012856.1 1313449 1313634 R KEGG: rso:RSc1303 hypothetical protein; hypothetical protein complement(1313449..1313634) Ralstonia pickettii 12D 8018884 YP_002981201.1 CDS Rpic12D_1240 NC_012856.1 1313754 1314404 R Represses a number of genes involved in the response to DNA damage; LexA repressor complement(1313754..1314404) Ralstonia pickettii 12D 8018885 YP_002981202.1 CDS Rpic12D_1241 NC_012856.1 1314658 1315434 D PFAM: oxidoreductase FAD-binding protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: rso:RSc1305 ferredoxin--NADP reductase; oxidoreductase FAD-binding domain-containing protein 1314658..1315434 Ralstonia pickettii 12D 8018886 YP_002981203.1 CDS Rpic12D_1242 NC_012856.1 1315572 1316564 D PFAM: Asparaginase/glutaminase; KEGG: rso:RSc1306 L-asparaginase II precursor signal peptide protein; asparaginase 1315572..1316564 Ralstonia pickettii 12D 8018887 YP_002981204.1 CDS rpsF NC_012856.1 1316658 1317026 D binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 1316658..1317026 Ralstonia pickettii 12D 8018888 YP_002981205.1 CDS Rpic12D_1244 NC_012856.1 1317068 1317394 D KEGG: rso:RSc1308 hypothetical protein; hypothetical protein 1317068..1317394 Ralstonia pickettii 12D 8018889 YP_002981206.1 CDS rpsR NC_012856.1 1317398 1317685 D binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 1317398..1317685 Ralstonia pickettii 12D 8018890 YP_002981207.1 CDS rplI NC_012856.1 1317710 1318162 D in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 1317710..1318162 Ralstonia pickettii 12D 8018891 YP_002981208.1 CDS Rpic12D_1247 NC_012856.1 1318304 1319692 D unwinds double stranded DNA; replicative DNA helicase 1318304..1319692 Ralstonia pickettii 12D 8018892 YP_002981209.1 CDS Rpic12D_1248 NC_012856.1 1319843 1320469 D PFAM: protein of unknown function DUF47; KEGG: rso:RSc1312 hypothetical protein; hypothetical protein 1319843..1320469 Ralstonia pickettii 12D 8018893 YP_002981210.1 CDS Rpic12D_1249 NC_012856.1 1320484 1321494 D PFAM: phosphate transporter; KEGG: rso:RSc1313 inorganic phosphate transporter; phosphate transporter 1320484..1321494 Ralstonia pickettii 12D 8018894 YP_002981211.1 CDS Rpic12D_1250 NC_012856.1 1321578 1322324 R PFAM: NLP/P60 protein; KEGG: rso:RSc1314 lipoprotein transmembrane; NLP/P60 protein complement(1321578..1322324) Ralstonia pickettii 12D 8018895 YP_002981212.1 CDS Rpic12D_1251 NC_012856.1 1322466 1322891 R KEGG: rso:RSc1315 signal peptide protein; signal peptide protein complement(1322466..1322891) Ralstonia pickettii 12D 8018896 YP_002981213.1 CDS Rpic12D_1252 NC_012856.1 1323014 1324741 R PFAM: PhoH family protein; SMART: nucleotide binding protein PINc; KEGG: rso:RSc1316 hypothetical protein; PhoH family protein complement(1323014..1324741) Ralstonia pickettii 12D 8018897 YP_002981214.1 CDS Rpic12D_1253 NC_012856.1 1325207 1325671 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rso:RSc1317 bacterioferritin comigratory oxidoreductase protein; alkyl hydroperoxide reductase complement(1325207..1325671) Ralstonia pickettii 12D 8018898 YP_002981215.1 CDS Rpic12D_1254 NC_012856.1 1325767 1326660 R PFAM: polysaccharide deacetylase; KEGG: rso:RSc1318 hypothetical protein; polysaccharide deacetylase complement(1325767..1326660) Ralstonia pickettii 12D 8018899 YP_002981216.1 CDS Rpic12D_1255 NC_012856.1 1326696 1327754 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: rso:RSc1319 hypothetical protein; NAD-dependent epimerase/dehydratase family protein complement(1326696..1327754) Ralstonia pickettii 12D 8018900 YP_002981217.1 CDS Rpic12D_1256 NC_012856.1 1327771 1328712 R PFAM: formyl transferase domain protein; KEGG: rso:RSc1320 hypothetical protein; formyltransferase complement(1327771..1328712) Ralstonia pickettii 12D 8018901 YP_002981218.1 CDS Rpic12D_1257 NC_012856.1 1328709 1329704 R PFAM: glycosyl transferase family 2; KEGG: rso:RSc1321 polymixin resistance glycosyltransferase transmembrane protein; family 2 glycosyl transferase complement(1328709..1329704) Ralstonia pickettii 12D 8018902 YP_002981219.1 CDS Rpic12D_1258 NC_012856.1 1329712 1330872 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rso:RSc1322 aminotransferase protein; glutamine--scyllo-inositol transaminase complement(1329712..1330872) Ralstonia pickettii 12D 8018903 YP_002981220.1 CDS Rpic12D_1259 NC_012856.1 1330913 1331284 R KEGG: rso:RSc1323 small multidrug resistance transmembrane protein; small multidrug resistance transmembrane protein complement(1330913..1331284) Ralstonia pickettii 12D 8018904 YP_002981221.1 CDS Rpic12D_1260 NC_012856.1 1331411 1333081 R PFAM: glycosyl transferase family 39; KEGG: rso:RSc1324 hypothetical protein; glycosyl transferase family protein complement(1331411..1333081) Ralstonia pickettii 12D 8018905 YP_002981222.1 CDS Rpic12D_1261 NC_012856.1 1333086 1333493 R PFAM: protein of unknown function DUF498; KEGG: rso:RSc1325 hypothetical protein; hypothetical protein complement(1333086..1333493) Ralstonia pickettii 12D 8018906 YP_002981223.1 CDS Rpic12D_1262 NC_012856.1 1333720 1335009 D broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase AlaT 1333720..1335009 Ralstonia pickettii 12D 8018907 YP_002981224.1 CDS Rpic12D_1263 NC_012856.1 1335108 1336427 D catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 1335108..1336427 Ralstonia pickettii 12D 8018908 YP_002981225.1 CDS Rpic12D_1264 NC_012856.1 1336443 1337888 D catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 1336443..1337888 Ralstonia pickettii 12D 8018909 YP_002981226.1 CDS Rpic12D_1265 NC_012856.1 1337893 1338510 D PFAM: uracil-DNA glycosylase superfamily; KEGG: rso:RSc1329 hypothetical protein; uracil-DNA glycosylase 1337893..1338510 Ralstonia pickettii 12D 8018910 YP_002981227.1 CDS Rpic12D_1266 NC_012856.1 1338592 1339851 D TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; MoeA domain protein domain IV; molybdopterin binding domain; KEGG: rso:RSc1330 molybdopterin biosynthesis MoeA protein; molybdenum cofactor synthesis domain-containing protein 1338592..1339851 Ralstonia pickettii 12D 8018911 YP_002981228.1 CDS Rpic12D_1267 NC_012856.1 1339864 1340121 D TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: rso:RSc1331 molybdopterin MPT converting factor subunit 1; molybdopterin converting factor subunit 1 1339864..1340121 Ralstonia pickettii 12D 8018912 YP_002981229.1 CDS Rpic12D_1268 NC_012856.1 1340138 1340659 D PFAM: molybdopterin biosynthesis MoaE protein; KEGG: rso:RSc1332 molybdopterin MPT converting factor subunit 2; molybdopterin biosynthesis MoaE protein 1340138..1340659 Ralstonia pickettii 12D 8018913 YP_002981230.1 CDS Rpic12D_1269 NC_012856.1 1340675 1341055 D may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 1340675..1341055 Ralstonia pickettii 12D 8018914 YP_002981231.1 CDS Rpic12D_1270 NC_012856.1 1341223 1343400 D KEGG: rso:RSc1334 D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane; D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane 1341223..1343400 Ralstonia pickettii 12D 8018915 YP_002981232.1 CDS Rpic12D_1271 NC_012856.1 1343571 1346159 D KEGG: rso:RSc1335 ATP-dependent protease; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; ATPase AAA; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; ATP-dependent chaperone ClpB 1343571..1346159 Ralstonia pickettii 12D 8018916 YP_002981233.1 CDS Rpic12D_1272 NC_012856.1 1346766 1348016 R PFAM: transposase mutator type; KEGG: rso:RSp0478 ISRSO7-transposase protein; transposase mutator type complement(1346766..1348016) Ralstonia pickettii 12D 8018917 YP_002981234.1 CDS Rpic12D_1273 NC_012856.1 1348034 1348594 D K02885 large subunit ribosomal protein L19; KEGG: 60S ribosomal protein L19 ; K02885 large subunit ribosomal protein L19e; 50S ribosomal protein L19 1348034..1348594 Ralstonia pickettii 12D 8018918 YP_002981235.1 CDS Rpic12D_1274 NC_012856.1 1348690 1349709 D TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: rso:RSc1336 sulfate-binding precursor signal peptide protein; sulfate ABC transporter substrate-binding protein 1348690..1349709 Ralstonia pickettii 12D 8018919 YP_002981236.1 CDS Rpic12D_1275 NC_012856.1 1349748 1350371 D PFAM: NADPH-dependent FMN reductase; NAD(P)H dehydrogenase (quinone); KEGG: rso:RSc1337 NADPH-dependent FMN reductase oxidoreductase protein; NADPH-dependent FMN reductase 1349748..1350371 Ralstonia pickettii 12D 8018920 YP_002981237.1 CDS Rpic12D_1276 NC_012856.1 1350489 1351481 D KEGG: cti:RALTA_A1784 alkanesulfonate transport protein; ABC superfamily, substrate binding unit; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3; aliphatic sulfonate ABC transporter substrate-binding protein 1350489..1351481 Ralstonia pickettii 12D 8018921 YP_002981238.1 CDS Rpic12D_1277 NC_012856.1 1351487 1352518 D TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: rso:RSc1338 alkanesulfonates binding precursor signal peptide protein; aliphatic sulfonate ABC transporter substrate-binding protein 1351487..1352518 Ralstonia pickettii 12D 8018922 YP_002981239.1 CDS Rpic12D_1278 NC_012856.1 1352562 1353725 D catalyzes the release of sulfite from alkanesulfonates; alkanesulfonate monooxygenase 1352562..1353725 Ralstonia pickettii 12D 8018923 YP_002981240.1 CDS Rpic12D_1279 NC_012856.1 1353744 1354562 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc1340 aliphatic sulfonate ABC transporter transmembrane protein; binding-protein-dependent transport system inner membrane protein 1353744..1354562 Ralstonia pickettii 12D 8018924 YP_002981241.1 CDS Rpic12D_1280 NC_012856.1 1354582 1355421 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RSc1341 aliphatic sulfonate ABC transporter ATP-binding protein; ABC transporter 1354582..1355421 Ralstonia pickettii 12D 8018925 YP_002981242.1 CDS Rpic12D_1281 NC_012856.1 1355492 1355707 D PFAM: TOBE domain protein; KEGG: rso:RSc1342 molybdopterin-binding protein; TOBE domain-containing protein 1355492..1355707 Ralstonia pickettii 12D 8018926 YP_002981243.1 CDS Rpic12D_1282 NC_012856.1 1355748 1356632 D PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: rso:RSc1343 hypothetical protein; diguanylate phosphodiesterase 1355748..1356632 Ralstonia pickettii 12D 8018927 YP_002981244.1 CDS Rpic12D_1283 NC_012856.1 1356643 1357317 D PFAM: protein of unknown function DUF1234; KEGG: rso:RSc1344 hypothetical protein; hypothetical protein 1356643..1357317 Ralstonia pickettii 12D 8018928 YP_002981245.1 CDS Rpic12D_1284 NC_012856.1 1357432 1358346 D TIGRFAM: sulfate ABC transporter, inner membrane subunit CysT; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc1345 sulfate transport ABC transporter protein; sulfate ABC transporter permease 1357432..1358346 Ralstonia pickettii 12D 8018929 YP_002981246.1 CDS Rpic12D_1285 NC_012856.1 1358348 1359334 D TIGRFAM: sulfate ABC transporter, inner membrane subunit CysW; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc1346 sulfate transport ABC transporter protein; sulfate ABC transporter permease 1358348..1359334 Ralstonia pickettii 12D 8018930 YP_002981247.1 CDS Rpic12D_1286 NC_012856.1 1359331 1360440 D KEGG: rso:RSc1347 sulfate transport ATP-binding ABC transporter protein; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter; Transport-associated OB domain protein; SMART: AAA ATPase; sulfate ABC transporter ATPase 1359331..1360440 Ralstonia pickettii 12D 8018931 YP_002981248.1 CDS Rpic12D_1287 NC_012856.1 1360482 1361441 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RSc1348 transcriptional regulator CysB-like protein; CysB family transcriptional regulator 1360482..1361441 Ralstonia pickettii 12D 8018932 YP_002981249.1 CDS Rpic12D_1288 NC_012856.1 1361570 1361881 D KEGG: rso:RSc1350 hypothetical protein; hypothetical protein 1361570..1361881 Ralstonia pickettii 12D 8018933 YP_002981250.1 CDS Rpic12D_1289 NC_012856.1 1361881 1363143 D PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: rso:RSc1351 transmembrane sensor histidine kinase transcription regulator protein; histidine kinase 1361881..1363143 Ralstonia pickettii 12D 8018934 YP_002981251.1 CDS Rpic12D_1290 NC_012856.1 1363147 1363980 D PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; KEGG: rso:RSc1352 two-component response regulator transcription regulator protein; LytTR family two component transcriptional regulator 1363147..1363980 Ralstonia pickettii 12D 8018935 YP_002981252.1 CDS Rpic12D_1291 NC_012856.1 1364049 1365776 D PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: rso:RSc1353 acetolactate synthase 2 catalytic subunit; thiamine pyrophosphate protein 1364049..1365776 Ralstonia pickettii 12D 8018936 YP_002981253.1 CDS Rpic12D_1292 NC_012856.1 1365837 1366334 D regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA 1365837..1366334 Ralstonia pickettii 12D 8018937 YP_002981254.1 CDS Rpic12D_1293 NC_012856.1 1366331 1366750 D PFAM: AIG2 family protein; KEGG: rso:RSc1355 hypothetical protein; AIG2 family protein 1366331..1366750 Ralstonia pickettii 12D 8018938 YP_002981255.1 CDS Rpic12D_1294 NC_012856.1 1367095 1367358 D KEGG: rso:RSc3434 hypothetical protein; hypothetical protein 1367095..1367358 Ralstonia pickettii 12D 8018939 YP_002981256.1 CDS Rpic12D_1295 NC_012856.1 1367754 1369058 D TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; KEGG: rso:RSc1358 isocitrate lyase; isocitrate lyase 1367754..1369058 Ralstonia pickettii 12D 8018940 YP_002981257.1 CDS Rpic12D_1296 NC_012856.1 1369191 1369892 R PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: reh:H16_B2484 transcriptional regulator, GntR-family; GntR family transcriptional regulator complement(1369191..1369892) Ralstonia pickettii 12D 8018941 YP_002981258.1 CDS Rpic12D_1297 NC_012856.1 1369960 1370694 R PFAM: Asp/Glu/hydantoin racemase; KEGG: reh:H16_B2482 hydantoin racemase; Asp/Glu/hydantoin racemase complement(1369960..1370694) Ralstonia pickettii 12D 8018942 YP_002981259.1 CDS Rpic12D_1298 NC_012856.1 1370720 1372210 R PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: vei:Veis_3810 permease for cytosine/purines, uracil, thiamine, allantoin; cytosine/purines uracil thiamine allantoin permease complement(1370720..1372210) Ralstonia pickettii 12D 8018943 YP_002981260.1 CDS Rpic12D_1299 NC_012856.1 1372385 1372819 R PFAM: UspA domain protein; KEGG: rso:RSc1359 hypothetical protein; UspA domain-containing protein complement(1372385..1372819) Ralstonia pickettii 12D 8018944 YP_002981261.1 CDS Rpic12D_1300 NC_012856.1 1372903 1373832 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RSc1360 transcription regulator protein; LysR family transcriptional regulator complement(1372903..1373832) Ralstonia pickettii 12D 8018945 YP_002981262.1 CDS Rpic12D_1301 NC_012856.1 1374051 1374749 D KEGG: rso:RSc1362 2-haloalkanoic acid dehalogenase protein; TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; haloacid dehalogenase I 1374051..1374749 Ralstonia pickettii 12D 8018946 YP_002981263.1 CDS Rpic12D_1302 NC_012856.1 1374835 1376415 D Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle; malate synthase 1374835..1376415 Ralstonia pickettii 12D 8018947 YP_002981264.1 CDS Rpic12D_1303 NC_012856.1 1376657 1377127 D PFAM: Domain of unknown function DUF1857; KEGG: rso:RSc1364 hypothetical protein; hypothetical protein 1376657..1377127 Ralstonia pickettii 12D 8018948 YP_002981265.1 CDS Rpic12D_1304 NC_012856.1 1377218 1378675 D TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc1365 multidrug resistance-like efflux transmembrane protein; EmrB/QacA subfamily drug resistance transporter 1377218..1378675 Ralstonia pickettii 12D 8018949 YP_002981266.1 CDS Rpic12D_1305 NC_012856.1 1378720 1378989 R PFAM: acyl-coA-binding protein ACBP; KEGG: rso:RSc1366 acyl-CoA-binding protein; acyl-coA-binding protein ACBP complement(1378720..1378989) Ralstonia pickettii 12D 8018950 YP_002981267.1 CDS Rpic12D_1306 NC_012856.1 1379163 1379903 D PFAM: peptidase M22 glycoprotease; KEGG: rso:RSc1367 transmembrane protein; peptidase M22 glycoprotease 1379163..1379903 Ralstonia pickettii 12D 8018951 YP_002981268.1 CDS Rpic12D_1307 NC_012856.1 1379900 1380427 D TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: rso:RSc1368 acyltransferase protein; ribosomal-protein-alanine acetyltransferase 1379900..1380427 Ralstonia pickettii 12D 8018952 YP_002981269.1 CDS Rpic12D_1308 NC_012856.1 1380424 1381218 D TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: uracil-DNA glycosylase superfamily; KEGG: rso:RSc1369 DNA polymerase-related protein, bacteriophage-type; phage SPO1 DNA polymerase-like protein 1380424..1381218 Ralstonia pickettii 12D 8018953 YP_002981270.1 CDS Rpic12D_1309 NC_012856.1 1381249 1382628 R PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc1370 hypothetical protein; lysophospholipid transporter LplT complement(1381249..1382628) Ralstonia pickettii 12D 8018954 YP_002981271.1 CDS alr NC_012856.1 1383210 1384334 D converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 1383210..1384334 Ralstonia pickettii 12D 8018955 YP_002981272.1 CDS Rpic12D_1311 NC_012856.1 1384403 1385773 D Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 1384403..1385773 Ralstonia pickettii 12D 8018956 YP_002981273.1 CDS Rpic12D_1312 NC_012856.1 1385884 1386363 D disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein; disulfide bond formation protein B 1385884..1386363 Ralstonia pickettii 12D 8018957 YP_002981274.1 CDS Rpic12D_1313 NC_012856.1 1386380 1386907 D PFAM: protein of unknown function DUF523; KEGG: rso:RSc1374 hypothetical protein; hypothetical protein 1386380..1386907 Ralstonia pickettii 12D 8018958 YP_002981275.1 CDS Rpic12D_1314 NC_012856.1 1386890 1387996 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rso:RSc1375 racemase transmembrane protein; L-carnitine dehydratase/bile acid-inducible protein F complement(1386890..1387996) Ralstonia pickettii 12D 8018959 YP_002981276.1 CDS Rpic12D_1315 NC_012856.1 1388028 1390106 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RSc1376 ABC transporter ATP-binding protein; ABC transporter complement(1388028..1390106) Ralstonia pickettii 12D 8018960 YP_002981277.1 CDS Rpic12D_1316 NC_012856.1 1390199 1391194 D PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: rso:RSc1377 hypothetical protein; RpiR family transcriptional regulator 1390199..1391194 Ralstonia pickettii 12D 8018961 YP_002981278.1 CDS Rpic12D_1317 NC_012856.1 1391212 1392174 D PFAM: peptidase T2 asparaginase 2; KEGG: rso:RSc1378 L-asparaginase precursor protein; peptidase T2 asparaginase 2 1391212..1392174 Ralstonia pickettii 12D 8018962 YP_002981279.1 CDS Rpic12D_1318 NC_012856.1 1392208 1394097 D KEGG: rso:RSc1379 ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter; SMART: AAA ATPase; peptide ABC transporter ATPase 1392208..1394097 Ralstonia pickettii 12D 8018963 YP_002981280.1 CDS Rpic12D_1319 NC_012856.1 1394147 1395712 D PFAM: extracellular solute-binding protein family 5; KEGG: rso:RSc1380 substrate-binding periplasmic (PBP) ABC transporter protein; family 5 extracellular solute-binding protein 1394147..1395712 Ralstonia pickettii 12D 8018964 YP_002981281.1 CDS Rpic12D_1320 NC_012856.1 1395783 1396706 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc1381 transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein 1395783..1396706 Ralstonia pickettii 12D 8018965 YP_002981282.1 CDS Rpic12D_1321 NC_012856.1 1396717 1397616 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc1382 transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein 1396717..1397616 Ralstonia pickettii 12D 8018966 YP_002981283.1 CDS Rpic12D_1322 NC_012856.1 1397626 1398651 D PFAM: peptidase S58 DmpA; KEGG: rso:RSc1383 D-aminopeptidase protein; peptidase S58 DmpA 1397626..1398651 Ralstonia pickettii 12D 8018967 YP_002981284.1 CDS Rpic12D_1323 NC_012856.1 1398661 1399476 D PFAM: peptidase M55 D-aminopeptidase; KEGG: rso:RSc1384 hypothetical protein; peptidase M55 D-aminopeptidase 1398661..1399476 Ralstonia pickettii 12D 8018968 YP_002981285.1 CDS Rpic12D_1324 NC_012856.1 1399803 1400171 D KEGG: rso:RSc1385 lipoprotein transmembrane; lipoprotein transmembrane 1399803..1400171 Ralstonia pickettii 12D 8018969 YP_002981286.1 CDS Rpic12D_1325 NC_012856.1 1400492 1401394 R involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase complement(1400492..1401394) Ralstonia pickettii 12D 8018970 YP_002981287.1 CDS Rpic12D_1326 NC_012856.1 1401402 1401920 R PFAM: adenylate cyclase; KEGG: rso:RSc1389 hypothetical protein; adenylate cyclase complement(1401402..1401920) Ralstonia pickettii 12D 8018971 YP_002981288.1 CDS Rpic12D_1327 NC_012856.1 1401929 1403080 R dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase complement(1401929..1403080) Ralstonia pickettii 12D 8018972 YP_002981289.1 CDS Rpic12D_1328 NC_012856.1 1403106 1403450 R PFAM: arsenate reductase and related; KEGG: rso:RSc1391 hypothetical protein; arsenate reductase-like protein complement(1403106..1403450) Ralstonia pickettii 12D 8018973 YP_002981290.1 CDS Rpic12D_1329 NC_012856.1 1403465 1403878 R KEGG: rso:RSc1392 transmembrane protein; hypothetical protein complement(1403465..1403878) Ralstonia pickettii 12D 8018974 YP_002981291.1 CDS dapD NC_012856.1 1403939 1404766 R catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase complement(1403939..1404766) Ralstonia pickettii 12D 8018975 YP_002981292.1 CDS Rpic12D_1331 NC_012856.1 1404812 1406011 R catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate; succinyldiaminopimelate transaminase complement(1404812..1406011) Ralstonia pickettii 12D 8018976 YP_002981293.1 CDS Rpic12D_1332 NC_012856.1 1406153 1407073 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RSc1395 hypothetical protein; hypothetical protein 1406153..1407073 Ralstonia pickettii 12D 8018977 YP_002981294.1 CDS Rpic12D_1333 NC_012856.1 1407107 1408153 D PFAM: alpha/beta hydrolase fold; KEGG: rso:RSc1396 transmembrane protein; alpha/beta hydrolase fold protein 1407107..1408153 Ralstonia pickettii 12D 8018978 YP_002981295.1 CDS Rpic12D_1334 NC_012856.1 1408406 1411921 D TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: reu:Reut_A1888 chromosome segregation protein SMC; chromosome segregation protein SMC 1408406..1411921 Ralstonia pickettii 12D 8018979 YP_002981296.1 CDS Rpic12D_1335 NC_012856.1 1411922 1413136 D SMART: ZipA FtsZ-binding region; KEGG: rso:RSc1397 hypothetical protein; ZipA FtsZ-binding region 1411922..1413136 Ralstonia pickettii 12D 8018980 YP_002981297.1 CDS Rpic12D_1336 NC_012856.1 1413147 1415588 D KEGG: rso:RSc1398 DNA ligase (polydeoxyribonucleotide synthase [NAD+]) protein; TIGRFAM: DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; SMART: NAD-dependent DNA ligase ; BRCT domain protein; Helix-hairpin-helix DNA-binding class 1; DNA ligase 1413147..1415588 Ralstonia pickettii 12D 8018981 YP_002981298.1 CDS Rpic12D_1337 NC_012856.1 1415585 1416118 D cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 1415585..1416118 Ralstonia pickettii 12D 8018982 YP_002981299.1 CDS Rpic12D_1338 NC_012856.1 1416187 1417308 D KEGG: rso:RSc1400 transmembrane protein; hypothetical protein 1416187..1417308 Ralstonia pickettii 12D 8018983 YP_002981300.1 CDS Rpic12D_1339 NC_012856.1 1417382 1419265 R PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein; KEGG: rso:RSc1401 hypothetical protein; RNA-binding S4 domain-containing protein complement(1417382..1419265) Ralstonia pickettii 12D 8018984 YP_002981301.1 CDS Rpic12D_1340 NC_012856.1 1419249 1421837 R catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase complement(1419249..1421837) Ralstonia pickettii 12D 8018985 YP_002981302.1 CDS Rpic12D_1341 NC_012856.1 1421956 1422780 R catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase complement(1421956..1422780) Ralstonia pickettii 12D 8018986 YP_002981303.1 CDS rpsB NC_012856.1 1423085 1423828 D one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 1423085..1423828 Ralstonia pickettii 12D 8018987 YP_002981304.1 CDS tsf NC_012856.1 1424082 1424972 D EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 1424082..1424972 Ralstonia pickettii 12D 8018988 YP_002981305.1 CDS pyrH NC_012856.1 1425264 1425974 D Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 1425264..1425974 Ralstonia pickettii 12D 8018989 YP_002981306.1 CDS frr NC_012856.1 1426151 1426711 D Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 1426151..1426711 Ralstonia pickettii 12D 8018990 YP_002981307.1 CDS Rpic12D_1346 NC_012856.1 1426764 1427540 D KEGG: rso:RSc1408 undecaprenyl pyrophosphate synthetase protein; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; UDP diphosphate synthase 1426764..1427540 Ralstonia pickettii 12D 8018991 YP_002981308.1 CDS Rpic12D_1347 NC_012856.1 1427544 1428362 D PFAM: phosphatidate cytidylyltransferase; KEGG: rso:RSc1409 phosphatidate cytidylyltransferase transmembrane protein; phosphatidate cytidylyltransferase 1427544..1428362 Ralstonia pickettii 12D 8018992 YP_002981309.1 CDS Rpic12D_1348 NC_012856.1 1428374 1429564 D catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1428374..1429564 Ralstonia pickettii 12D 8018993 YP_002981310.1 CDS Rpic12D_1349 NC_012856.1 1429651 1431039 D KEGG: rso:RSc1411 hypothetical protein; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; membrane-associated zinc metalloprotease 1429651..1431039 Ralstonia pickettii 12D 8018994 YP_002981311.1 CDS Rpic12D_1350 NC_012856.1 1431200 1433452 D TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: rso:RSc1412 outer membrane signal peptide protein; outer membrane protein assembly complex, YaeT protein 1431200..1433452 Ralstonia pickettii 12D 8018995 YP_002981312.1 CDS Rpic12D_1351 NC_012856.1 1433452 1434003 D PFAM: outer membrane chaperone Skp (OmpH); KEGG: rso:RSc1413 hypothetical protein; outer membrane chaperone Skp 1433452..1434003 Ralstonia pickettii 12D 8018996 YP_002981313.1 CDS lpxD NC_012856.1 1434014 1435087 D adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 1434014..1435087 Ralstonia pickettii 12D 8018997 YP_002981314.1 CDS fabZ NC_012856.1 1435084 1435587 D in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 1435084..1435587 Ralstonia pickettii 12D 8018998 YP_002981315.1 CDS Rpic12D_1354 NC_012856.1 1435584 1436399 D catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 1435584..1436399 Ralstonia pickettii 12D 8018999 YP_002981316.1 CDS lpxB NC_012856.1 1436441 1437574 D catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 1436441..1437574 Ralstonia pickettii 12D 8019000 YP_002981317.1 CDS rnhB NC_012856.1 1437579 1438277 D RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 1437579..1438277 Ralstonia pickettii 12D 8019001 YP_002981318.1 CDS Rpic12D_1357 NC_012856.1 1438300 1439082 D PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: rso:RSc1419 tRNA/rRNA methyltransferase protein; tRNA/rRNA methyltransferase SpoU 1438300..1439082 Ralstonia pickettii 12D 8019002 YP_002981319.1 CDS Rpic12D_1358 NC_012856.1 1439225 1440100 D KEGG: bcj:BCAM2201 hypothetical protein; hypothetical protein 1439225..1440100 Ralstonia pickettii 12D 8019003 YP_002981320.1 CDS Rpic12D_1359 NC_012856.1 1440118 1441926 D PFAM: short-chain dehydrogenase/reductase SDR; alpha/beta hydrolase fold; KR domain protein; KEGG: bur:Bcep18194_B0709 short chain dehydrogenase; short chain dehydrogenase 1440118..1441926 Ralstonia pickettii 12D 8019004 YP_002981321.1 CDS Rpic12D_1360 NC_012856.1 1441959 1442855 D KEGG: bch:Bcen2424_4970 metal-dependent hydrolase; metal-dependent hydrolase 1441959..1442855 Ralstonia pickettii 12D 8019005 YP_002981322.1 CDS Rpic12D_1361 NC_012856.1 1442930 1443781 R PFAM: protein of unknown function DUF299; KEGG: rso:RSc1420 hypothetical protein; hypothetical protein complement(1442930..1443781) Ralstonia pickettii 12D 8019006 YP_002981323.1 CDS Rpic12D_1362 NC_012856.1 1444012 1446399 D catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase 1444012..1446399 Ralstonia pickettii 12D 8019007 YP_002981324.1 CDS Rpic12D_1363 NC_012856.1 1446577 1447002 D PFAM: protein of unknown function DUF107; KEGG: rso:RSc1422 hypothetical protein; hypothetical protein 1446577..1447002 Ralstonia pickettii 12D 8019008 YP_002981325.1 CDS Rpic12D_1364 NC_012856.1 1447052 1447981 D PFAM: band 7 protein; SMART: band 7 protein; KEGG: rso:RSc1423 transmembrane protein; hypothetical protein 1447052..1447981 Ralstonia pickettii 12D 8019009 YP_002981326.1 CDS smpB NC_012856.1 1448002 1448448 R binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein complement(1448002..1448448) Ralstonia pickettii 12D 8019010 YP_002981327.1 CDS Rpic12D_1366 NC_012856.1 1448574 1449011 D PFAM: cyclase/dehydrase; KEGG: rso:RSc1425 hypothetical protein; cyclase/dehydrase 1448574..1449011 Ralstonia pickettii 12D 8019011 YP_002981328.1 CDS Rpic12D_1367 NC_012856.1 1448998 1449363 D PFAM: protein of unknown function UPF0125; KEGG: rso:RSc1426 hypothetical protein; hypothetical protein 1448998..1449363 Ralstonia pickettii 12D 8019012 YP_002981329.1 CDS Rpic12D_1368 NC_012856.1 1449371 1449910 R KEGG: rso:RSc1427 hypothetical protein; hypothetical protein complement(1449371..1449910) Ralstonia pickettii 12D 8019013 YP_002981330.1 CDS Rpic12D_1369 NC_012856.1 1450065 1451009 R KEGG: rso:RSc1428 hypothetical protein; hypothetical protein complement(1450065..1451009) Ralstonia pickettii 12D 8019014 YP_002981331.1 CDS Rpic12D_1370 NC_012856.1 1451164 1452627 D catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 1451164..1452627 Ralstonia pickettii 12D 8019015 YP_002981332.1 CDS Rpic12D_1371 NC_012856.1 1452751 1453329 D KEGG: rso:RSc1430 hypothetical protein; hypothetical protein 1452751..1453329 Ralstonia pickettii 12D 8019016 YP_002981333.1 CDS guaA NC_012856.1 1453304 1454923 D contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 1453304..1454923 Ralstonia pickettii 12D 8019017 YP_002981334.1 CDS Rpic12D_1373 NC_012856.1 1455025 1455237 R KEGG: rso:RSc2704 hypothetical protein; hypothetical protein complement(1455025..1455237) Ralstonia pickettii 12D 8019018 YP_002981335.1 CDS Rpic12D_1374 NC_012856.1 1455505 1455708 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: reh:H16_B1929 cold shock protein, DNA-binding; cold-shock DNA-binding domain-containing protein 1455505..1455708 Ralstonia pickettii 12D 8019019 YP_002981336.1 CDS Rpic12D_1375 NC_012856.1 1455878 1456522 R KEGG: reu:Reut_A3203 hypothetical protein; hypothetical protein complement(1455878..1456522) Ralstonia pickettii 12D 8019020 YP_002981337.1 CDS Rpic12D_1376 NC_012856.1 1456559 1457779 R KEGG: bpy:Bphyt_4115 hypothetical protein; hypothetical protein complement(1456559..1457779) Ralstonia pickettii 12D 8019021 YP_002981338.1 CDS Rpic12D_1377 NC_012856.1 1457866 1458636 D PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: bac:BamMC406_1895 protein of unknown function DUF899 thioredoxin family protein; hypothetical protein 1457866..1458636 Ralstonia pickettii 12D 8019022 YP_002981339.1 CDS Rpic12D_1378 NC_012856.1 1458611 1459384 D KEGG: reh:H16_B0829 hypothetical protein; hypothetical protein 1458611..1459384 Ralstonia pickettii 12D 8019023 YP_002981340.1 CDS Rpic12D_1380 NC_012856.1 1459775 1461163 D PFAM: sodium:dicarboxylate symporter; KEGG: eca:ECA2410 sodium:dicarboxylate symporter; sodium:dicarboxylate symporter 1459775..1461163 Ralstonia pickettii 12D 8019025 YP_002981341.1 CDS Rpic12D_1381 NC_012856.1 1461228 1462172 R TIGRFAM: pca operon transcription factor PcaQ; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RSc1440 transcriptional regulatory DNA-binding transcription regulator protein; LysR family transcriptional regulator complement(1461228..1462172) Ralstonia pickettii 12D 8019026 YP_002981342.1 CDS Rpic12D_1382 NC_012856.1 1462266 1463015 D TIGRFAM: protocatechuate 3,4-dioxygenase, beta subunit; PFAM: intradiol ring-cleavage dioxygenase; KEGG: rso:RSc1441 protocatechuate 3,4-dioxygenase subunit beta oxidoreductase protein; protocatechuate 3,4-dioxygenase subunit beta 1462266..1463015 Ralstonia pickettii 12D 8019027 YP_002981343.1 CDS Rpic12D_1383 NC_012856.1 1463015 1463710 D KEGG: rso:RSc1442 protocatechuate 3,4-dioxygenase alpha chain oxidoreductase protein; TIGRFAM: protocatechuate 3,4-dioxygenase, alpha subunit; PFAM: intradiol ring-cleavage dioxygenase; protocatechuate 3,4-dioxygenase subunit alpha 1463015..1463710 Ralstonia pickettii 12D 8019028 YP_002981344.1 CDS Rpic12D_1384 NC_012856.1 1463772 1464440 D TIGRFAM: 2'-5' RNA ligase; PFAM: phosphoesterase HXTX; KEGG: rso:RSc1443 ligase protein; 2'-5' RNA ligase 1463772..1464440 Ralstonia pickettii 12D 8019029 YP_002981345.1 CDS Rpic12D_1385 NC_012856.1 1464452 1465147 R KEGG: rso:RSc1444 hypothetical protein; hypothetical protein complement(1464452..1465147) Ralstonia pickettii 12D 8019030 YP_002981346.1 CDS Rpic12D_1386 NC_012856.1 1465173 1466054 R PFAM: beta-lactamase domain protein; KEGG: psb:Psyr_2218 beta-lactamase-like; beta-lactamase domain-containing protein complement(1465173..1466054) Ralstonia pickettii 12D 8019031 YP_002981347.1 CDS Rpic12D_1387 NC_012856.1 1466164 1467066 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: yen:YE3335 LysR family transcriptional regulator; LysR family transcriptional regulator 1466164..1467066 Ralstonia pickettii 12D 8019032 YP_002981348.1 CDS Rpic12D_1388 NC_012856.1 1467059 1468270 R PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc1445 hypothetical protein; major facilitator superfamily protein complement(1467059..1468270) Ralstonia pickettii 12D 8019033 YP_002981349.1 CDS Rpic12D_1389 NC_012856.1 1468299 1469126 R KEGG: rso:RSc1448 hypothetical protein; hypothetical protein complement(1468299..1469126) Ralstonia pickettii 12D 8019034 YP_002981350.1 CDS Rpic12D_1390 NC_012856.1 1469130 1469828 R PFAM: DSBA oxidoreductase; KEGG: mpt:Mpe_A0744 2-hydroxychromene-2-carboxylate isomerase family protein; DSBA oxidoreductase complement(1469130..1469828) Ralstonia pickettii 12D 8019035 YP_002981351.1 CDS Rpic12D_1391 NC_012856.1 1469894 1470838 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mpt:Mpe_A0745 LysR family transcriptional regulator; LysR family transcriptional regulator complement(1469894..1470838) Ralstonia pickettii 12D 8019036 YP_002981352.1 CDS Rpic12D_1392 NC_012856.1 1470988 1472205 D PFAM: major facilitator superfamily MFS_1; KEGG: bmj:BMULJ_02164 permease of the major facilitator superfamily; major facilitator superfamily protein 1470988..1472205 Ralstonia pickettii 12D 8019037 YP_002981353.1 CDS Rpic12D_1393 NC_012856.1 1472226 1472330 D hypothetical protein 1472226..1472330 Ralstonia pickettii 12D 8019038 YP_002981354.1 CDS Rpic12D_1394 NC_012856.1 1472452 1473090 D KEGG: rso:RSc1449 hypothetical protein; hypothetical protein 1472452..1473090 Ralstonia pickettii 12D 8019039 YP_002981355.1 CDS Rpic12D_1395 NC_012856.1 1473169 1473645 D PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: rso:RSc1450 6-pyruvoyl tetrahydrobiopterin synthase protein; hypothetical protein 1473169..1473645 Ralstonia pickettii 12D 8019040 YP_002981356.1 CDS Rpic12D_1396 NC_012856.1 1473665 1474213 D PFAM: CMP/dCMP deaminase zinc-binding; KEGG: rso:RSc1451 hydrolase protein; zinc-binding CMP/dCMP deaminase 1473665..1474213 Ralstonia pickettii 12D 8019041 YP_002981357.1 CDS ldcA NC_012856.1 1474210 1475136 D catalyzes the release of D-alanine from L-alanyl-D-glutamyl-meso-diaminopimelyl-D-alanine; L,D-carboxypeptidase A 1474210..1475136 Ralstonia pickettii 12D 8019042 YP_002981358.1 CDS Rpic12D_1398 NC_012856.1 1475248 1476870 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RSc1453 ABC transporter ATP-binding protein; ABC transporter 1475248..1476870 Ralstonia pickettii 12D 8019043 YP_002981359.1 CDS Rpic12D_1399 NC_012856.1 1477112 1477735 D KEGG: met:M446_1268 hypothetical protein; hypothetical protein 1477112..1477735 Ralstonia pickettii 12D 8019044 YP_002981360.1 CDS Rpic12D_1400 NC_012856.1 1478058 1479605 D KEGG: reu:Reut_A1290 acetyl-CoA hydrolase; TIGRFAM: succinate CoA transferase; PFAM: acetyl-CoA hydrolase/transferase; succinate CoA transferase 1478058..1479605 Ralstonia pickettii 12D 8019045 YP_002981361.1 CDS Rpic12D_1401 NC_012856.1 1479625 1480518 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rme:Rmet_1795 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1479625..1480518) Ralstonia pickettii 12D 8019046 YP_002981362.1 CDS Rpic12D_1402 NC_012856.1 1480646 1481182 R KEGG: rso:RSc1455 hypothetical protein; hypothetical protein complement(1480646..1481182) Ralstonia pickettii 12D 8019047 YP_002981363.1 CDS Rpic12D_1403 NC_012856.1 1481335 1482771 D PFAM: aldehyde Dehydrogenase; KEGG: rso:RSc1456 betaine aldehyde dehydrogenase (BADH) oxidoreductase protein; aldehyde dehydrogenase 1481335..1482771 Ralstonia pickettii 12D 8019048 YP_002981364.1 CDS Rpic12D_1404 NC_012856.1 1482840 1483100 R PFAM: protein of unknown function DUF1289; KEGG: rso:RSc1457 hypothetical protein; hypothetical protein complement(1482840..1483100) Ralstonia pickettii 12D 8019049 YP_002981365.1 CDS Rpic12D_1405 NC_012856.1 1483142 1485013 R PFAM: glycoside hydrolase 15-related; KEGG: rso:RSc1458 hypothetical protein; glycoside hydrolase 15-like protein complement(1483142..1485013) Ralstonia pickettii 12D 8019050 YP_002981366.1 CDS Rpic12D_1406 NC_012856.1 1485051 1486277 D KEGG: rso:RSc1459 hypothetical protein; hypothetical protein 1485051..1486277 Ralstonia pickettii 12D 8019051 YP_002981367.1 CDS Rpic12D_1407 NC_012856.1 1486355 1487485 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 1486355..1487485 Ralstonia pickettii 12D 8019052 YP_002981368.1 CDS Rpic12D_1408 NC_012856.1 1487814 1489355 D PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: rso:RSc1460 methyl-accepting chemotaxis transducer transmembrane protein; methyl-accepting chemotaxis sensory transducer 1487814..1489355 Ralstonia pickettii 12D 8019053 YP_002981369.1 CDS Rpic12D_1409 NC_012856.1 1489455 1489922 D KEGG: reu:Reut_B5305 hypothetical protein; hypothetical protein 1489455..1489922 Ralstonia pickettii 12D 8019054 YP_002981370.1 CDS Rpic12D_1410 NC_012856.1 1489944 1490666 R PFAM: MgtC/SapB transporter; KEGG: rso:RSc1461 transporter transmembrane protein; MgtC/SapB transporter complement(1489944..1490666) Ralstonia pickettii 12D 8019055 YP_002981371.1 CDS Rpic12D_1411 NC_012856.1 1490766 1491869 R PFAM: Male sterility domain; NAD-dependent epimerase/dehydratase; KEGG: rso:RSc1462 signal peptide protein; hypothetical protein complement(1490766..1491869) Ralstonia pickettii 12D 8019056 YP_002981372.1 CDS Rpic12D_1412 NC_012856.1 1492120 1493151 R PFAM: protein of unknown function DUF182; KEGG: rso:RSc1463 hypothetical protein; hypothetical protein complement(1492120..1493151) Ralstonia pickettii 12D 8019057 YP_002981373.1 CDS Rpic12D_1413 NC_012856.1 1493208 1493882 R PFAM: carbon monoxide dehydrogenase subunit G; KEGG: rso:RSc1464 hypothetical protein; carbon monoxide dehydrogenase subunit G complement(1493208..1493882) Ralstonia pickettii 12D 8019058 YP_002981374.1 CDS Rpic12D_1414 NC_012856.1 1493873 1495105 R PFAM: VWA containing CoxE family protein; SMART: von Willebrand factor type A; KEGG: rso:RSc1465 hypothetical protein; VWA containing CoxE family protein complement(1493873..1495105) Ralstonia pickettii 12D 8019059 YP_002981375.1 CDS Rpic12D_1415 NC_012856.1 1495109 1496005 R PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rso:RSc1466 hypothetical protein; ATPase complement(1495109..1496005) Ralstonia pickettii 12D 8019060 YP_002981376.1 CDS Rpic12D_1416 NC_012856.1 1496026 1496832 R PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: rso:RSc1467 oxidoreductase protein; molybdopterin dehydrogenase FAD-binding complement(1496026..1496832) Ralstonia pickettii 12D 8019061 YP_002981377.1 CDS Rpic12D_1417 NC_012856.1 1496847 1499225 R PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: rso:RSc1468 oxidoreductase protein; molybdopterin-binding aldehyde oxidase and xanthine dehydrogenase complement(1496847..1499225) Ralstonia pickettii 12D 8019062 YP_002981378.1 CDS Rpic12D_1418 NC_012856.1 1499245 1499772 R PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: rso:RSc1469 dehydrogenase oxidoreductase protein; (2Fe-2S)-binding domain-containing protein complement(1499245..1499772) Ralstonia pickettii 12D 8019063 YP_002981379.1 CDS Rpic12D_1419 NC_012856.1 1500142 1500318 R KEGG: rso:RSc1470 hypothetical protein; hypothetical protein complement(1500142..1500318) Ralstonia pickettii 12D 8019064 YP_002981380.1 CDS Rpic12D_1420 NC_012856.1 1500502 1500981 R PFAM: CreA family protein; KEGG: rso:RSc1471 CreA signal peptide protein; CreA family protein complement(1500502..1500981) Ralstonia pickettii 12D 8019065 YP_002981381.1 CDS Rpic12D_1421 NC_012856.1 1501014 1501979 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RSc1472 transcription regulator protein; LysR family transcriptional regulator complement(1501014..1501979) Ralstonia pickettii 12D 8019066 YP_002981382.1 CDS Rpic12D_1422 NC_012856.1 1502044 1503597 D PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc1473 multidrug resistance-like transmembrane protein; major facilitator superfamily protein 1502044..1503597 Ralstonia pickettii 12D 8019067 YP_002981383.1 CDS Rpic12D_1423 NC_012856.1 1503601 1506636 R PFAM: glycosyl transferase family 51; KEGG: rso:RSc1476 hypothetical protein; glycosyl transferase family protein complement(1503601..1506636) Ralstonia pickettii 12D 8019068 YP_002981384.1 CDS Rpic12D_1424 NC_012856.1 1506740 1507651 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bvi:Bcep1808_4117 LysR family transcriptional regulator; LysR family transcriptional regulator complement(1506740..1507651) Ralstonia pickettii 12D 8019069 YP_002981385.1 CDS Rpic12D_1425 NC_012856.1 1507763 1508872 D TIGRFAM: muconate and chloromuconate cycloisomerase; PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bmj:BMULJ_03554 muconate cycloisomerase; muconate and chloromuconate cycloisomerase 1507763..1508872 Ralstonia pickettii 12D 8019070 YP_002981386.1 CDS Rpic12D_1426 NC_012856.1 1508909 1509199 D KEGG: bam:Bamb_6586 muconolactone delta-isomerase; TIGRFAM: muconolactone delta-isomerase; PFAM: Muconolactone delta-isomerase; muconolactone delta-isomerase 1508909..1509199 Ralstonia pickettii 12D 8019071 YP_002981387.1 CDS Rpic12D_1427 NC_012856.1 1509235 1510170 D TIGRFAM: catechol 1,2-dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: bmj:BMULJ_05288 catechol 1,2-dioxygenase; catechol 1,2-dioxygenase 1509235..1510170 Ralstonia pickettii 12D 8019072 YP_002981388.1 CDS Rpic12D_1428 NC_012856.1 1510199 1511557 D PFAM: Rieske [2Fe-2S] domain protein; Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like; KEGG: bur:Bcep18194_C7046 ring hydroxylating dioxygenase, alpha subunit; Rieske (2Fe-2S) domain-containing protein 1510199..1511557 Ralstonia pickettii 12D 8019073 YP_002981389.1 CDS Rpic12D_1429 NC_012856.1 1511554 1512042 D KEGG: bch:Bcen2424_6525 2-chlorobenzoate 1,2-dioxygenase; TIGRFAM: benzoate 1,2-dioxygenase, small subunit; PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; benzoate 1,2-dioxygenase small subunit 1511554..1512042 Ralstonia pickettii 12D 8019074 YP_002981390.1 CDS Rpic12D_1430 NC_012856.1 1512089 1513117 D PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; oxidoreductase FAD-binding protein; ferredoxin; FAD-binding 9 siderophore-interacting domain protein; KEGG: bmj:BMULJ_05285 benzoate 1,2-dioxygenase electron transfer component; oxidoreductase FAD/NAD(P)-binding domain-containing protein 1512089..1513117 Ralstonia pickettii 12D 8019075 YP_002981391.1 CDS benD NC_012856.1 1513114 1513896 D catalyzes the degradation of 2-hydro-1,2-dihydroxy benzoate to catechol; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase 1513114..1513896 Ralstonia pickettii 12D 8019076 YP_002981392.1 CDS Rpic12D_1432 NC_012856.1 1513996 1515315 D PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: reh:H16_B1919 MFS transporter, AAHS family; major facilitator superfamily protein 1513996..1515315 Ralstonia pickettii 12D 8019077 YP_002981393.1 CDS Rpic12D_1434 NC_012856.1 1515663 1515830 R hypothetical protein complement(1515663..1515830) Ralstonia pickettii 12D 8019079 YP_002981394.1 CDS Rpic12D_1435 NC_012856.1 1516225 1517631 D catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 1516225..1517631 Ralstonia pickettii 12D 8019080 YP_002981395.1 CDS Rpic12D_1436 NC_012856.1 1517618 1518865 D catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase 1517618..1518865 Ralstonia pickettii 12D 8019081 YP_002981396.1 CDS bioD NC_012856.1 1518867 1519574 D DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase 1518867..1519574 Ralstonia pickettii 12D 8019082 YP_002981397.1 CDS Rpic12D_1438 NC_012856.1 1519612 1520130 D KEGG: rso:RSc1480 lipoprotein transmembrane; lipoprotein transmembrane 1519612..1520130 Ralstonia pickettii 12D 8019083 YP_002981398.1 CDS Rpic12D_1439 NC_012856.1 1520296 1520820 D KEGG: rso:RSc1481 hypothetical protein; hypothetical protein 1520296..1520820 Ralstonia pickettii 12D 8019084 YP_002981399.1 CDS Rpic12D_1440 NC_012856.1 1520904 1521113 R PFAM: protein of unknown function DUF1653; KEGG: rso:RSc1482 hypothetical protein; hypothetical protein complement(1520904..1521113) Ralstonia pickettii 12D 8019085 YP_002981400.1 CDS Rpic12D_1441 NC_012856.1 1521121 1521468 R KEGG: rso:RSc1483 hypothetical protein; hypothetical protein complement(1521121..1521468) Ralstonia pickettii 12D 8019086 YP_002981401.1 CDS Rpic12D_1442 NC_012856.1 1521550 1522545 R PFAM: pyruvate carboxyltransferase; KEGG: aav:Aave_1652 hydroxymethylglutaryl-CoA lyase; pyruvate carboxyltransferase complement(1521550..1522545) Ralstonia pickettii 12D 8019087 YP_002981402.1 CDS Rpic12D_1443 NC_012856.1 1522633 1523532 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dac:Daci_5234 LysR family transcriptional regulator; LysR family transcriptional regulator complement(1522633..1523532) Ralstonia pickettii 12D 8019088 YP_002981403.1 CDS Rpic12D_1444 NC_012856.1 1523688 1524893 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: reh:H16_A1234 predicted acyl-CoA transferase/carnitine dehydratase; L-carnitine dehydratase/bile acid-inducible protein F 1523688..1524893 Ralstonia pickettii 12D 8019089 YP_002981404.1 CDS Rpic12D_1445 NC_012856.1 1524908 1526350 D KEGG: ppf:Pput_5022 3-isopropylmalate dehydratase, large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain protein; 3-isopropylmalate dehydratase large subunit 1524908..1526350 Ralstonia pickettii 12D 8019090 YP_002981405.1 CDS Rpic12D_1446 NC_012856.1 1526337 1526984 D KEGG: cti:RALTA_A0673 3-isopropylmalate isomerase, subunit with LeuC; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; 3-isopropylmalate dehydratase small subunit 1526337..1526984 Ralstonia pickettii 12D 8019091 YP_002981406.1 CDS Rpic12D_1447 NC_012856.1 1527041 1528378 D PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: met:M446_5703 major facilitator transporter; major facilitator superfamily protein 1527041..1528378 Ralstonia pickettii 12D 8019092 YP_002981407.1 CDS Rpic12D_1448 NC_012856.1 1528966 1530177 R PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B2563 major facilitator transporter; major facilitator superfamily protein complement(1528966..1530177) Ralstonia pickettii 12D 8019093 YP_002981408.1 CDS Rpic12D_1449 NC_012856.1 1530297 1531259 D PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bac:BamMC406_3471 AraC family transcriptional regulator; AraC family transcriptional regulator 1530297..1531259 Ralstonia pickettii 12D 8019094 YP_002981409.1 CDS Rpic12D_1450 NC_012856.1 1531263 1532180 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rme:Rmet_4505 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(1531263..1532180) Ralstonia pickettii 12D 8019095 YP_002981410.1 CDS Rpic12D_1451 NC_012856.1 1532398 1533702 D PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: rme:Rmet_4506 major facilitator superfamily MFS_1; major facilitator superfamily protein 1532398..1533702 Ralstonia pickettii 12D 8019096 YP_002981411.1 CDS Rpic12D_1452 NC_012856.1 1533745 1534959 D KEGG: rme:Rmet_4507 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 1533745..1534959 Ralstonia pickettii 12D 8019097 YP_002981412.1 CDS Rpic12D_1453 NC_012856.1 1534980 1536464 D PFAM: amidase; KEGG: pap:PSPA7_4912 amidase; amidase 1534980..1536464 Ralstonia pickettii 12D 8019098 YP_002981413.1 CDS Rpic12D_1454 NC_012856.1 1536453 1537256 R PFAM: LysR substrate-binding; KEGG: mex:Mext_1680 LysR substrate-binding; LysR family transcriptional regulator complement(1536453..1537256) Ralstonia pickettii 12D 8019099 YP_002981414.1 CDS Rpic12D_1455 NC_012856.1 1537445 1538299 R PFAM: metallophosphoesterase; KEGG: rso:RSc1795 hypothetical protein; metallophosphoesterase complement(1537445..1538299) Ralstonia pickettii 12D 8019100 YP_002981415.1 CDS Rpic12D_1456 NC_012856.1 1538299 1539360 R PFAM: ABC transporter; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rso:RSc1794 ABC transporter ATP-binding protein; ABC transporter complement(1538299..1539360) Ralstonia pickettii 12D 8019101 YP_002981416.1 CDS Rpic12D_1457 NC_012856.1 1539357 1540154 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc1793 ABC transporter permease; binding-protein-dependent transport system inner membrane protein complement(1539357..1540154) Ralstonia pickettii 12D 8019102 YP_002981417.1 CDS Rpic12D_1458 NC_012856.1 1540151 1541002 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc1792 transport system permease transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein complement(1540151..1541002) Ralstonia pickettii 12D 8019103 YP_002981418.1 CDS Rpic12D_1459 NC_012856.1 1541005 1542036 R PFAM: extracellular solute-binding protein family 1; KEGG: rso:RSc1791 solute-binding periplasmic (PBP) ABC transporter protein; family 1 extracellular solute-binding protein complement(1541005..1542036) Ralstonia pickettii 12D 8019104 YP_002981419.1 CDS Rpic12D_1460 NC_012856.1 1542033 1543103 R PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: rso:RSc1790 transcription regulator protein; LacI family transcriptional regulator complement(1542033..1543103) Ralstonia pickettii 12D 8019105 YP_002981420.1 CDS Rpic12D_1461 NC_012856.1 1543344 1544648 D PFAM: protein of unknown function DUF323; KEGG: rso:RSc1789 hypothetical protein; hypothetical protein 1543344..1544648 Ralstonia pickettii 12D 8019106 YP_002981421.1 CDS Rpic12D_1462 NC_012856.1 1544700 1545554 R SMART: ankyrin; KEGG: rso:RSc1788 aankyrin repeat-containing protein; ankyrin complement(1544700..1545554) Ralstonia pickettii 12D 8019107 YP_002981422.1 CDS Rpic12D_1463 NC_012856.1 1545538 1546341 R TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: rso:RSc1787 hypothetical protein; TatD family hydrolase complement(1545538..1546341) Ralstonia pickettii 12D 8019108 YP_002981423.1 CDS Rpic12D_1464 NC_012856.1 1546394 1546813 R PFAM: type IV pilus assembly PilZ; KEGG: rso:RSc1786 type 4 fimbrial biogenesis protein; type IV pilus assembly PilZ complement(1546394..1546813) Ralstonia pickettii 12D 8019109 YP_002981424.1 CDS Rpic12D_1465 NC_012856.1 1546856 1547866 R catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' complement(1546856..1547866) Ralstonia pickettii 12D 8019110 YP_002981425.1 CDS tmk NC_012856.1 1547948 1548565 R catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase complement(1547948..1548565) Ralstonia pickettii 12D 8019111 YP_002981426.1 CDS Rpic12D_1467 NC_012856.1 1548562 1549560 R PFAM: aminodeoxychorismate lyase; KEGG: rso:RSc1783 hypothetical protein; aminodeoxychorismate lyase complement(1548562..1549560) Ralstonia pickettii 12D 8019112 YP_002981427.1 CDS Rpic12D_1468 NC_012856.1 1549693 1550733 D TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: rso:RSc1782 hypothetical protein; folate-binding protein YgfZ 1549693..1550733 Ralstonia pickettii 12D 8019113 YP_002981428.1 CDS Rpic12D_1469 NC_012856.1 1550747 1551037 D KEGG: rso:RSc1781 hypothetical protein; hypothetical protein 1550747..1551037 Ralstonia pickettii 12D 8019114 YP_002981429.1 CDS Rpic12D_1470 NC_012856.1 1551166 1551981 D PFAM: protein of unknown function DUF833; KEGG: rso:RSc1780 signal peptide protein; hypothetical protein 1551166..1551981 Ralstonia pickettii 12D 8019115 YP_002981430.1 CDS Rpic12D_1471 NC_012856.1 1551993 1552895 R PFAM: fatty acid hydroxylase; KEGG: reu:Reut_A2772 sterol desaturase; fatty acid hydroxylase complement(1551993..1552895) Ralstonia pickettii 12D 8019116 YP_002981431.1 CDS Rpic12D_1472 NC_012856.1 1552996 1553901 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: reu:Reut_A2771 LysR family transcriptional regulator; LysR family transcriptional regulator 1552996..1553901 Ralstonia pickettii 12D 8019117 YP_002981432.1 CDS Rpic12D_1473 NC_012856.1 1553891 1554343 R PFAM: GCN5-related N-acetyltransferase; KEGG: rso:RSc1774 hypothetical protein; N-acetyltransferase GCN5 complement(1553891..1554343) Ralstonia pickettii 12D 8019118 YP_002981433.1 CDS Rpic12D_1474 NC_012856.1 1554353 1554802 R PFAM: thioesterase superfamily protein; KEGG: rso:RSc1773 thioesterase protein; thioesterase superfamily protein complement(1554353..1554802) Ralstonia pickettii 12D 8019119 YP_002981434.1 CDS Rpic12D_1475 NC_012856.1 1554825 1555805 R PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: rso:RSc1772 esterase/lipase protein; alpha/beta hydrolase complement(1554825..1555805) Ralstonia pickettii 12D 8019120 YP_002981435.1 CDS Rpic12D_1476 NC_012856.1 1555915 1557063 D PFAM: iron-containing alcohol dehydrogenase; KEGG: rso:RSc1771 NAD-dependent 4-hydroxybutyrate dehydrogenase oxidoreductase protein; alcohol dehydrogenase 1555915..1557063 Ralstonia pickettii 12D 8019121 YP_002981436.1 CDS Rpic12D_1477 NC_012856.1 1557073 1557999 R PFAM: alpha/beta hydrolase fold; KEGG: rso:RSc1770 hydrolase protein; alpha/beta hydrolase fold protein complement(1557073..1557999) Ralstonia pickettii 12D 8019122 YP_002981437.1 CDS Rpic12D_1478 NC_012856.1 1558036 1558938 R probable dehydrogenase; hypothetical protein complement(1558036..1558938) Ralstonia pickettii 12D 8019123 YP_002981438.1 CDS Rpic12D_1479 NC_012856.1 1558995 1559951 R PFAM: Glutathione S-transferase domain; KEGG: rso:RSc1768 glutathione S-transferase-related protein; glutathione S-transferase complement(1558995..1559951) Ralstonia pickettii 12D 8019124 YP_002981439.1 CDS Rpic12D_1480 NC_012856.1 1559979 1560827 R PFAM: class II aldolase/adducin family protein; KEGG: rme:Rmet_1848 hypothetical protein; hypothetical protein complement(1559979..1560827) Ralstonia pickettii 12D 8019125 YP_002981440.1 CDS Rpic12D_1481 NC_012856.1 1560925 1561935 R PFAM: alcohol dehydrogenase zinc-binding domain protein; KEGG: rso:RSc1766 NADP-dependent oxidoreductase oxidoreductase protein; alcohol dehydrogenase zinc-binding domain-containing protein complement(1560925..1561935) Ralstonia pickettii 12D 8019126 YP_002981441.1 CDS Rpic12D_1482 NC_012856.1 1561980 1563383 R PFAM: beta-lactamase; KEGG: rso:RSc1765 6-aminohexanoate-dimer hydrolase lipoprotein; 6-aminohexanoate-dimer hydrolase complement(1561980..1563383) Ralstonia pickettii 12D 8019127 YP_002981442.1 CDS Rpic12D_1483 NC_012856.1 1563473 1563907 R PFAM: thioesterase superfamily protein; KEGG: rso:RSc1764 hypothetical protein; thioesterase superfamily protein complement(1563473..1563907) Ralstonia pickettii 12D 8019128 YP_002981443.1 CDS Rpic12D_1484 NC_012856.1 1563940 1564722 R Involved in the nonphosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate; gluconate 5-dehydrogenase complement(1563940..1564722) Ralstonia pickettii 12D 8019129 YP_002981444.1 CDS Rpic12D_1485 NC_012856.1 1564748 1566616 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rso:RSc1762 acyl-CoA dehydrogenase oxidoreductase protein; acyl-CoA dehydrogenase domain-containing protein complement(1564748..1566616) Ralstonia pickettii 12D 8019130 YP_002981445.1 CDS Rpic12D_1486 NC_012856.1 1566932 1568110 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase complement(1566932..1568110) Ralstonia pickettii 12D 8019131 YP_002981446.1 CDS Rpic12D_1487 NC_012856.1 1568171 1568812 R PFAM: isochorismatase hydrolase; KEGG: rso:RSc1760 bifunctional pyrazinamidase/nicotinamidase hydrolase; nicotinamidase complement(1568171..1568812) Ralstonia pickettii 12D 8019132 YP_002981447.1 CDS Rpic12D_1488 NC_012856.1 1568852 1570933 R PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: rso:RSc1759 trifunctonal enoyl-CoA hydratase/delta3-cis-delta2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase; NAD-binding 3-hydroxyacyl-CoA dehydrogenase complement(1568852..1570933) Ralstonia pickettii 12D 8019133 YP_002981448.1 CDS Rpic12D_1489 NC_012856.1 1571291 1572826 D PFAM: amino acid permease-associated region; KEGG: rso:RSc1758 lysine-specific permease transmembrane protein; amino acid permease-associated protein 1571291..1572826 Ralstonia pickettii 12D 8019134 YP_002981449.1 CDS Rpic12D_1490 NC_012856.1 1572906 1574429 D PFAM: amino acid permease-associated region; KEGG: rso:RSc1757 lysine-specific permease transmembrane protein; amino acid permease-associated protein 1572906..1574429 Ralstonia pickettii 12D 8019135 YP_002981450.1 CDS Rpic12D_1491 NC_012856.1 1574499 1575218 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RSc1754 amino-acid ATP-binding ABC transporter protein; ABC transporter complement(1574499..1575218) Ralstonia pickettii 12D 8019136 YP_002981451.1 CDS Rpic12D_1492 NC_012856.1 1575218 1576006 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RSc1753 amino-acid ATP-binding ABC transporter protein; ABC transporter complement(1575218..1576006) Ralstonia pickettii 12D 8019137 YP_002981452.1 CDS Rpic12D_1493 NC_012856.1 1576003 1577337 R PFAM: inner-membrane translocator; KEGG: rso:RSc1752 amino acid ABC transporter permease; inner-membrane translocator complement(1576003..1577337) Ralstonia pickettii 12D 8019138 YP_002981453.1 CDS Rpic12D_1494 NC_012856.1 1577338 1578330 R PFAM: inner-membrane translocator; KEGG: rso:RSc1751 amino acid transmembrane transmembrane protein; inner-membrane translocator complement(1577338..1578330) Ralstonia pickettii 12D 8019139 YP_002981454.1 CDS Rpic12D_1495 NC_012856.1 1578412 1579668 R PFAM: extracellular ligand-binding receptor; KEGG: rso:RSc1750 Leu/Ile/Val-binding precursor signal peptide protein; extracellular ligand-binding receptor complement(1578412..1579668) Ralstonia pickettii 12D 8019140 YP_002981455.1 CDS Rpic12D_1496 NC_012856.1 1579888 1581516 R activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase complement(1579888..1581516) Ralstonia pickettii 12D 8019141 YP_002981456.1 CDS Rpic12D_1497 NC_012856.1 1581861 1583450 D PFAM: protein of unknown function UPF0061; KEGG: rso:RSc1748 hypothetical protein; hypothetical protein 1581861..1583450 Ralstonia pickettii 12D 8019142 YP_002981457.1 CDS Rpic12D_1498 NC_012856.1 1583579 1583965 D this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B 1583579..1583965 Ralstonia pickettii 12D 8019143 YP_002981458.1 CDS Rpic12D_1499 NC_012856.1 1584014 1584586 D Involved in cell division; probably involved in intracellular septation; intracellular septation protein A 1584014..1584586 Ralstonia pickettii 12D 8019144 YP_002981459.1 CDS Rpic12D_1500 NC_012856.1 1584586 1584858 D PFAM: BolA family protein; KEGG: rso:RSc1745 hypothetical protein; BolA family protein 1584586..1584858 Ralstonia pickettii 12D 8019145 YP_002981460.1 CDS Rpic12D_1501 NC_012856.1 1584901 1585698 D PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: rso:RSc1744 isomerase rotamase signal peptide protein; PpiC-type peptidyl-prolyl cis-trans isomerase 1584901..1585698 Ralstonia pickettii 12D 8019146 YP_002981461.1 CDS Rpic12D_1502 NC_012856.1 1585989 1586969 D PFAM: protein of unknown function DUF534; KEGG: rso:RSc1740 signal peptide protein; hypothetical protein 1585989..1586969 Ralstonia pickettii 12D 8019147 YP_002981462.1 CDS Rpic12D_1503 NC_012856.1 1587145 1588053 D PFAM: inner-membrane translocator; KEGG: rso:RSc1739 transmembrane ABC transporter protein; inner-membrane translocator 1587145..1588053 Ralstonia pickettii 12D 8019148 YP_002981463.1 CDS Rpic12D_1504 NC_012856.1 1588055 1588849 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RSc1738 ABC transporter ATP-binding protein; ABC transporter 1588055..1588849 Ralstonia pickettii 12D 8019149 YP_002981464.1 CDS Rpic12D_1505 NC_012856.1 1589093 1591573 D TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: reh:H16_A2226 two domain protein VgrG; ImpA family type VI secretion-associated protein 1589093..1591573 Ralstonia pickettii 12D 8019150 YP_002981465.1 CDS Rpic12D_1506 NC_012856.1 1591612 1592085 D PFAM: YiaAB two helix domain protein; KEGG: rso:RSc0141 hypothetical protein; YiaAB two helix domain-containing protein 1591612..1592085 Ralstonia pickettii 12D 8019151 YP_002981466.1 CDS Rpic12D_1507 NC_012856.1 1592168 1593025 D KEGG: reh:H16_B1133 hypothetical protein; hypothetical protein 1592168..1593025 Ralstonia pickettii 12D 8019152 YP_002981467.1 CDS Rpic12D_1508 NC_012856.1 1593121 1593774 D KEGG: reh:H16_A2223 hypothetical protein; hypothetical protein 1593121..1593774 Ralstonia pickettii 12D 8019153 YP_002981468.1 CDS Rpic12D_1509 NC_012856.1 1593833 1594486 D KEGG: reh:H16_A2223 hypothetical protein; hypothetical protein 1593833..1594486 Ralstonia pickettii 12D 8019154 YP_002981469.1 CDS Rpic12D_1510 NC_012856.1 1594544 1595197 D KEGG: reh:H16_A2223 hypothetical protein; hypothetical protein 1594544..1595197 Ralstonia pickettii 12D 8019155 YP_002981470.1 CDS Rpic12D_1511 NC_012856.1 1595256 1595909 D KEGG: reh:H16_A2223 hypothetical protein; hypothetical protein 1595256..1595909 Ralstonia pickettii 12D 8019156 YP_002981471.1 CDS Rpic12D_1512 NC_012856.1 1595906 1598212 D KEGG: reh:H16_B1136 hypothetical protein; hypothetical protein 1595906..1598212 Ralstonia pickettii 12D 8019157 YP_002981472.1 CDS Rpic12D_1513 NC_012856.1 1598215 1598499 D PFAM: PAAR repeat-containing protein; KEGG: bam:Bamb_3483 PaaR repeat-containing protein; PAAR repeat-containing protein 1598215..1598499 Ralstonia pickettii 12D 8019158 YP_002981473.1 CDS Rpic12D_1514 NC_012856.1 1598492 1599475 D TIGRFAM: type IV / VI secretion system protein, DotU family; KEGG: bph:Bphy_7017 DotU family type IV/VI secretion system protein; DotU family type IV / VI secretion system protein 1598492..1599475 Ralstonia pickettii 12D 8019159 YP_002981474.1 CDS Rpic12D_1515 NC_012856.1 1599571 1600671 D PFAM: heat shock protein DnaJ domain protein; KEGG: bur:Bcep18194_B3003 hypothetical protein; heat shock protein DnaJ domain-containing protein 1599571..1600671 Ralstonia pickettii 12D 8019160 YP_002981475.1 CDS Rpic12D_1517 NC_012856.1 1601329 1602648 D PFAM: Two-component sensor kinase domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rso:RSc1735 two-component transmembrane sensor kinase transcription regulator protein; histidine kinase 1601329..1602648 Ralstonia pickettii 12D 8019162 YP_002981476.1 CDS Rpic12D_1518 NC_012856.1 1603170 1604258 D KEGG: rso:RSc1734 ABC transporter ATP-binding protein; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter; Transport-associated OB domain protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase 1603170..1604258 Ralstonia pickettii 12D 8019163 YP_002981477.1 CDS Rpic12D_1519 NC_012856.1 1604330 1605370 D PFAM: extracellular solute-binding protein family 1; KEGG: rso:RSc1733 lipoprotein signal peptide; family 1 extracellular solute-binding protein 1604330..1605370 Ralstonia pickettii 12D 8019164 YP_002981478.1 CDS Rpic12D_1520 NC_012856.1 1605474 1606742 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc1732 transport system permease transmembrane protein; binding-protein-dependent transport system inner membrane protein 1605474..1606742 Ralstonia pickettii 12D 8019165 YP_002981479.1 CDS Rpic12D_1521 NC_012856.1 1606758 1607594 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc1731 transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein 1606758..1607594 Ralstonia pickettii 12D 8019166 YP_002981480.1 CDS Rpic12D_1522 NC_012856.1 1608554 1609318 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rso:RSc1730 dehydrogenase/reductase oxidoreductase protein; short-chain dehydrogenase/reductase SDR complement(1608554..1609318) Ralstonia pickettii 12D 8019167 YP_002981481.1 CDS Rpic12D_1523 NC_012856.1 1609451 1610377 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RSc1729 transcription regulator protein; LysR family transcriptional regulator 1609451..1610377 Ralstonia pickettii 12D 8019168 YP_002981482.1 CDS Rpic12D_1524 NC_012856.1 1610472 1611686 D PFAM: beta-lactamase; KEGG: azc:AZC_0974 beta-lactamase class C; beta-lactamase 1610472..1611686 Ralstonia pickettii 12D 8019169 YP_002981483.1 CDS Rpic12D_1525 NC_012856.1 1611766 1615872 R catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase complement(1611766..1615872) Ralstonia pickettii 12D 8019170 YP_002981484.1 CDS Rpic12D_1526 NC_012856.1 1616021 1616590 R KEGG: rso:RSc1721 hypothetical protein; transcriptional regulator complement(1616021..1616590) Ralstonia pickettii 12D 8019171 YP_002981485.1 CDS Rpic12D_1527 NC_012856.1 1616677 1618272 D TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: YjeF-family domain protein; protein of unknown function UPF0031; KEGG: rso:RSc1720 hypothetical protein; carbohydrate kinase 1616677..1618272 Ralstonia pickettii 12D 8019172 YP_002981486.1 CDS pgi NC_012856.1 1618344 1619963 D functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 1618344..1619963 Ralstonia pickettii 12D 8019173 YP_002981487.1 CDS Rpic12D_1529 NC_012856.1 1619973 1620683 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RSc1718 ABC transporter ATP-binding protein; ABC transporter complement(1619973..1620683) Ralstonia pickettii 12D 8019174 YP_002981488.1 CDS Rpic12D_1530 NC_012856.1 1620757 1621365 D PFAM: lipolytic protein G-D-S-L family; KEGG: rso:RSc1717 esterase signal peptide protein; lysophospholipase 1620757..1621365 Ralstonia pickettii 12D 8019175 YP_002981489.1 CDS Rpic12D_1531 NC_012856.1 1621450 1622142 D KEGG: rso:RSc1716 signal peptidase I (SPase I) protein; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; signal peptidase I 1621450..1622142 Ralstonia pickettii 12D 8019176 YP_002981490.1 CDS Rpic12D_1532 NC_012856.1 1622227 1624167 R PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: rso:RSc1715 peptidyl-prolyl cis-trans isomerase transmembrane protein; PpiC-type peptidyl-prolyl cis-trans isomerase complement(1622227..1624167) Ralstonia pickettii 12D 8019177 YP_002981491.1 CDS Rpic12D_1533 NC_012856.1 1624589 1624861 R PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: rso:RSc1714 DNA-binding protein HU-beta; histone family protein DNA-binding protein complement(1624589..1624861) Ralstonia pickettii 12D 8019180 YP_002981492.1 CDS Rpic12D_1534 NC_012856.1 1625018 1627432 R KEGG: rso:RSc1713 ATP-dependent protease La protein; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; ATPase AAA; ATPase associated with various cellular activities AAA_5; SMART: peptidase S16 lon domain protein; AAA ATPase; ATP-dependent protease La complement(1625018..1627432) Ralstonia pickettii 12D 8019181 YP_002981493.1 CDS clpX NC_012856.1 1627602 1628876 R binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX complement(1627602..1628876) Ralstonia pickettii 12D 8019182 YP_002981494.1 CDS clpP NC_012856.1 1629073 1629720 R hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit complement(1629073..1629720) Ralstonia pickettii 12D 8019183 YP_002981495.1 CDS tig NC_012856.1 1629762 1631105 R Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor complement(1629762..1631105) Ralstonia pickettii 12D 8019184 YP_002981496.1 CDS mnmC NC_012856.1 1631350 1633368 R catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules; 5-methylaminomethyl-2-thiouridine methyltransferase complement(1631350..1633368) Ralstonia pickettii 12D 8019185 YP_002981497.1 CDS Rpic12D_1539 NC_012856.1 1633626 1633820 R KEGG: rso:RSc1708 hypothetical protein; hypothetical protein complement(1633626..1633820) Ralstonia pickettii 12D 8019186 YP_002981498.1 CDS Rpic12D_1540 NC_012856.1 1633922 1635328 R PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: pap:PSPA7_1545 MFS family transporter; major facilitator superfamily protein complement(1633922..1635328) Ralstonia pickettii 12D 8019187 YP_002981499.1 CDS Rpic12D_1541 NC_012856.1 1635409 1636596 R PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bxe:Bxe_A3005 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F complement(1635409..1636596) Ralstonia pickettii 12D 8019188 YP_002981500.1 CDS Rpic12D_1542 NC_012856.1 1636593 1638356 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bxe:Bxe_A3006 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(1636593..1638356) Ralstonia pickettii 12D 8019189 YP_002981501.1 CDS Rpic12D_1543 NC_012856.1 1638474 1639370 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bxe:Bxe_A3007 LysR family transcriptional regulator; LysR family transcriptional regulator 1638474..1639370 Ralstonia pickettii 12D 8019190 YP_002981502.1 CDS Rpic12D_1544 NC_012856.1 1639380 1639805 R PFAM: GCN5-related N-acetyltransferase; KEGG: cvi:CV_2792 acetyltransferase; N-acetyltransferase GCN5 complement(1639380..1639805) Ralstonia pickettii 12D 8019191 YP_002981503.1 CDS Rpic12D_1545 NC_012856.1 1639821 1640246 R TIGRFAM: cytochrome O ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: rme:Rmet_5611 cytochrome C oxidase subunit IV; cytochrome O ubiquinol oxidase subunit IV complement(1639821..1640246) Ralstonia pickettii 12D 8019192 YP_002981504.1 CDS Rpic12D_1546 NC_012856.1 1640243 1640908 R TIGRFAM: cytochrome O ubiquinol oxidase, subunit III; PFAM: cytochrome C oxidase subunit III; KEGG: rme:Rmet_5610 cytochrome C oxidase, subunit III; cytochrome o ubiquinol oxidase subunit III complement(1640243..1640908) Ralstonia pickettii 12D 8019193 YP_002981505.1 CDS Rpic12D_1547 NC_012856.1 1640901 1642904 R KEGG: rme:Rmet_5609 cytochrome C oxidase, subunit I; TIGRFAM: cytochrome O ubiquinol oxidase, subunit I; PFAM: cytochrome C oxidase subunit I; cytochrome o ubiquinol oxidase subunit I complement(1640901..1642904) Ralstonia pickettii 12D 8019194 YP_002981506.1 CDS Rpic12D_1548 NC_012856.1 1643008 1644060 R TIGRFAM: ubiquinol oxidase, subunit II; PFAM: COX aromatic rich domain protein; cytochrome C oxidase subunit II; KEGG: rme:Rmet_5608 ubiquinol oxidase, subunit II; ubiquinol oxidase subunit II complement(1643008..1644060) Ralstonia pickettii 12D 8019195 YP_002981507.1 CDS Rpic12D_1549 NC_012856.1 1644218 1645537 D PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: rme:Rmet_5607 major facilitator superfamily MFS_1; general substrate transporter 1644218..1645537 Ralstonia pickettii 12D 8019196 YP_002981508.1 CDS Rpic12D_1550 NC_012856.1 1645622 1645810 D PFAM: CsbD family protein; KEGG: bph:Bphy_5331 CsbD family protein; CsbD family protein 1645622..1645810 Ralstonia pickettii 12D 8019197 YP_002981509.1 CDS Rpic12D_1552 NC_012856.1 1646649 1647401 R PFAM: Asp/Glu/hydantoin racemase; KEGG: har:HEAR1463 maleate cis-trans isomerase protein; Asp/Glu/hydantoin racemase complement(1646649..1647401) Ralstonia pickettii 12D 8019199 YP_002981510.1 CDS Rpic12D_1553 NC_012856.1 1647428 1648747 R PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: hya:HY04AAS1_1460 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(1647428..1648747) Ralstonia pickettii 12D 8019200 YP_002981511.1 CDS Rpic12D_1554 NC_012856.1 1648961 1649890 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: reh:H16_A1233 transcriptional regulator, LysR-family; LysR family transcriptional regulator 1648961..1649890 Ralstonia pickettii 12D 8019201 YP_002981512.1 CDS Rpic12D_1555 NC_012856.1 1649920 1650261 D hypothetical protein 1649920..1650261 Ralstonia pickettii 12D 8019202 YP_002981513.1 CDS Rpic12D_1556 NC_012856.1 1650368 1650835 R KEGG: rso:RS01728 hypothetical protein; hypothetical protein complement(1650368..1650835) Ralstonia pickettii 12D 8019203 YP_002981514.1 CDS Rpic12D_1557 NC_012856.1 1650853 1651632 R PFAM: ApbE family lipoprotein; KEGG: bbt:BBta_2627 thiamine biosynthesis lipoprotein ApbE transmembrane; ApbE family lipoprotein complement(1650853..1651632) Ralstonia pickettii 12D 8019204 YP_002981515.1 CDS Rpic12D_1558 NC_012856.1 1651632 1652192 R PFAM: FMN-binding domain protein; KEGG: rso:RS01729 signal peptide protein; FMN-binding domain-containing protein complement(1651632..1652192) Ralstonia pickettii 12D 8019205 YP_002981516.1 CDS Rpic12D_1559 NC_012856.1 1652228 1653604 R PFAM: phosphate-selective porin O and P; KEGG: rso:RS01730 signal peptide protein; phosphate-selective porin O and P complement(1652228..1653604) Ralstonia pickettii 12D 8019206 YP_002981517.1 CDS Rpic12D_1560 NC_012856.1 1653642 1654883 R PFAM: Di-haem cytochrome C peroxidase; KEGG: rso:RS01731 lipoprotein; Di-heme cytochrome C peroxidase complement(1653642..1654883) Ralstonia pickettii 12D 8019207 YP_002981518.1 CDS Rpic12D_1561 NC_012856.1 1655301 1655414 R hypothetical protein complement(1655301..1655414) Ralstonia pickettii 12D 8019208 YP_002981519.1 CDS Rpic12D_1563 NC_012856.1 1656268 1659387 R PFAM: acriflavin resistance protein; KEGG: rso:RSc1654 transmembrane drug efflux protein; acriflavin resistance protein complement(1656268..1659387) Ralstonia pickettii 12D 8019211 YP_002981520.1 CDS Rpic12D_1564 NC_012856.1 1659430 1660638 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rso:RSc1653 transport/efflux transmembrane protein; RND family efflux transporter MFP subunit complement(1659430..1660638) Ralstonia pickettii 12D 8019212 YP_002981521.1 CDS Rpic12D_1565 NC_012856.1 1660824 1661657 D TIGRFAM: squalene synthase HpnD; PFAM: Squalene/phytoene synthase; KEGG: rso:RSc1652 phytoene synthase protein; squalene synthase 1660824..1661657 Ralstonia pickettii 12D 8019213 YP_002981522.1 CDS Rpic12D_1566 NC_012856.1 1661658 1662842 R PFAM: protein of unknown function DUF1501; KEGG: rso:RSc1651 hypothetical protein; hypothetical protein complement(1661658..1662842) Ralstonia pickettii 12D 8019214 YP_002981523.1 CDS Rpic12D_1567 NC_012856.1 1662868 1664505 R PFAM: protein of unknown function DUF1800; KEGG: rso:RSc1650 signal peptide protein; hypothetical protein complement(1662868..1664505) Ralstonia pickettii 12D 8019215 YP_002981524.1 CDS Rpic12D_1568 NC_012856.1 1664575 1665021 R KEGG: rso:RSc1649 transmembrane protein; hypothetical protein complement(1664575..1665021) Ralstonia pickettii 12D 8019216 YP_002981525.1 CDS ompR NC_012856.1 1665212 1665934 D part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; osmolarity response regulator 1665212..1665934 Ralstonia pickettii 12D 8019217 YP_002981526.1 CDS Rpic12D_1570 NC_012856.1 1665968 1667329 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: rso:RSc1647 oxidative stress resistance two-component transmembrane sensor histidine kinase transcription regulator protein; histidine kinase 1665968..1667329 Ralstonia pickettii 12D 8019218 YP_002981527.1 CDS Rpic12D_1571 NC_012856.1 1667613 1668161 D PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rso:RSc1646 alkyl hydroperoxide reductase (subunit C) oxidoreductase protein; alkyl hydroperoxide reductase 1667613..1668161 Ralstonia pickettii 12D 8019219 YP_002981528.1 CDS Rpic12D_1572 NC_012856.1 1668242 1668763 D PFAM: carboxymuconolactone decarboxylase; KEGG: rme:Rmet_1951 alkylhydroperoxidase AhpD core; carboxymuconolactone decarboxylase 1668242..1668763 Ralstonia pickettii 12D 8019220 YP_002981529.1 CDS ispF NC_012856.1 1668846 1669352 R catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(1668846..1669352) Ralstonia pickettii 12D 8019221 YP_002981530.1 CDS ispD NC_012856.1 1669349 1670107 R 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase complement(1669349..1670107) Ralstonia pickettii 12D 8019222 YP_002981531.1 CDS Rpic12D_1575 NC_012856.1 1670280 1673711 D KEGG: rso:RSc1642 transcription-repair coupling factor protein; TIGRFAM: transcription-repair coupling factor; PFAM: transcription factor CarD; helicase domain protein; TRCF domain protein; DEAD/DEAH box helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases ; helicase domain protein; transcription-repair coupling factor 1670280..1673711 Ralstonia pickettii 12D 8019223 YP_002981532.1 CDS Rpic12D_1576 NC_012856.1 1673749 1674942 D catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine; acetylornithine deacetylase 1673749..1674942 Ralstonia pickettii 12D 8019224 YP_002981533.1 CDS Rpic12D_1577 NC_012856.1 1675056 1675913 D KEGG: rso:RSc1640 phosphoserine phosphatase protein; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; Haloacid dehalogenase domain protein hydrolase type 3; phosphoserine phosphatase SerB 1675056..1675913 Ralstonia pickettii 12D 8019225 YP_002981534.1 CDS Rpic12D_1578 NC_012856.1 1675920 1676981 D PFAM: protein of unknown function DUF1016; KEGG: vei:Veis_1183 protein of unknown function DUF1016; hypothetical protein 1675920..1676981 Ralstonia pickettii 12D 8019226 YP_002981535.1 CDS Rpic12D_1579 NC_012856.1 1677056 1678267 R catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase complement(1677056..1678267) Ralstonia pickettii 12D 8019227 YP_002981536.1 CDS Rpic12D_1580 NC_012856.1 1678309 1679052 R KEGG: rso:RSc1638 signal peptide protein; signal peptide protein complement(1678309..1679052) Ralstonia pickettii 12D 8019228 YP_002981537.1 CDS Rpic12D_1581 NC_012856.1 1679027 1680211 R catalyzes the formation of beta-ketovaleryl-CoA from acetyl-CoA and propionyl-CoA; beta-ketothiolase complement(1679027..1680211) Ralstonia pickettii 12D 8019229 YP_002981538.1 CDS rimO NC_012856.1 1680299 1681660 R catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; ribosomal protein S12 methylthiotransferase complement(1680299..1681660) Ralstonia pickettii 12D 8019230 YP_002981539.1 CDS Rpic12D_1583 NC_012856.1 1681727 1682707 R PFAM: dihydrouridine synthase DuS; KEGG: rso:RSc1635 hypothetical protein; dihydrouridine synthase DuS complement(1681727..1682707) Ralstonia pickettii 12D 8019231 YP_002981540.1 CDS Rpic12D_1584 NC_012856.1 1682906 1683460 R TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHA accumulation regulator DNA-binding protein; PHB accumulation regulatory domain protein; KEGG: rso:RSc1634 hypothetical protein; polyhydroxyalkonate synthesis repressor PhaR complement(1682906..1683460) Ralstonia pickettii 12D 8019232 YP_002981541.1 CDS Rpic12D_1585 NC_012856.1 1683865 1684605 R catalyzes the formation of 3-hydroxybutyryl-CoA from acetoacetyl-CoA in polyhydroxyalkanoate synthesis; acetyacetyl-CoA reductase complement(1683865..1684605) Ralstonia pickettii 12D 8019233 YP_002981542.1 CDS Rpic12D_1586 NC_012856.1 1684614 1684706 R hypothetical protein complement(1684614..1684706) Ralstonia pickettii 12D 8019234 YP_002981543.1 CDS Rpic12D_1587 NC_012856.1 1684726 1685907 R Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase complement(1684726..1685907) Ralstonia pickettii 12D 8019235 YP_002981544.1 CDS Rpic12D_1588 NC_012856.1 1685996 1687789 R TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: Poly-beta-hydroxybutyrate polymerase domain protein; alpha/beta hydrolase fold; KEGG: rso:RSc1631 poly-beta-hydroxybutyrate polymerase transmembrane protein; poly(R)-hydroxyalkanoic acid synthase complement(1685996..1687789) Ralstonia pickettii 12D 8019236 YP_002981545.1 CDS Rpic12D_1589 NC_012856.1 1688060 1688296 D KEGG: rso:RSc1630 hypothetical protein; hypothetical protein 1688060..1688296 Ralstonia pickettii 12D 8019237 YP_002981546.1 CDS Rpic12D_1590 NC_012856.1 1688301 1689110 R PFAM: protein of unknown function DUF152; KEGG: rso:RSc1629 hypothetical protein; hypothetical protein complement(1688301..1689110) Ralstonia pickettii 12D 8019238 YP_002981547.1 CDS Rpic12D_1591 NC_012856.1 1689094 1690206 R KEGG: rso:RSc1628 ribosomal large subunit pseudouridine synthase D protein; TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; pseudouridine synthase complement(1689094..1690206) Ralstonia pickettii 12D 8019239 YP_002981548.1 CDS Rpic12D_1592 NC_012856.1 1690222 1691079 D TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: rso:RSc1627 hypothetical protein; outer membrane assembly lipoprotein YfiO 1690222..1691079 Ralstonia pickettii 12D 8019240 YP_002981549.1 CDS Rpic12D_1593 NC_012856.1 1691148 1693325 R SMART: helicase c2; KEGG: rso:RSc1626 ATP-dependent DNA helicase-related protein; helicase c2 complement(1691148..1693325) Ralstonia pickettii 12D 8019241 YP_002981550.1 CDS Rpic12D_1594 NC_012856.1 1693374 1693577 R KEGG: rso:RSc1625 hypothetical protein; hypothetical protein complement(1693374..1693577) Ralstonia pickettii 12D 8019242 YP_002981551.1 CDS Rpic12D_1595 NC_012856.1 1693613 1694377 R KEGG: rso:RSc1624 hypothetical protein; hypothetical protein complement(1693613..1694377) Ralstonia pickettii 12D 8019243 YP_002981552.1 CDS Rpic12D_1596 NC_012856.1 1694455 1696821 D PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; RNA binding S1 domain protein; KEGG: rso:RSc1623 transcription accessory protein; RNA binding S1 domain-containing protein 1694455..1696821 Ralstonia pickettii 12D 8019244 YP_002981553.1 CDS Rpic12D_1597 NC_012856.1 1697007 1697447 D KEGG: rso:RSc1622 hypothetical protein; hypothetical protein 1697007..1697447 Ralstonia pickettii 12D 8019245 YP_002981554.1 CDS Rpic12D_1598 NC_012856.1 1697528 1699429 R PFAM: potassium transporter; KEGG: rso:RSc1621 potassium uptake transmembrane protein; potassium transporter complement(1697528..1699429) Ralstonia pickettii 12D 8019246 YP_002981555.1 CDS Rpic12D_1599 NC_012856.1 1699820 1700059 D KEGG: rso:RSc1620 hypothetical protein; hypothetical protein 1699820..1700059 Ralstonia pickettii 12D 8019247 YP_002981556.1 CDS Rpic12D_1600 NC_012856.1 1700085 1701182 R catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 complement(1700085..1701182) Ralstonia pickettii 12D 8019248 YP_002981557.1 CDS Rpic12D_1601 NC_012856.1 1701723 1702310 D PFAM: NUDIX hydrolase; KEGG: rso:RSc1618 hypothetical protein; NUDIX hydrolase 1701723..1702310 Ralstonia pickettii 12D 8019251 YP_002981558.1 CDS aat NC_012856.1 1702335 1703081 D leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 1702335..1703081 Ralstonia pickettii 12D 8019252 YP_002981559.1 CDS Rpic12D_1603 NC_012856.1 1703068 1703832 D Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 1703068..1703832 Ralstonia pickettii 12D 8019253 YP_002981560.1 CDS Rpic12D_1604 NC_012856.1 1704015 1704329 R PFAM: TM2 domain containing protein; KEGG: rso:RSc1614 hypothetical protein; hypothetical protein complement(1704015..1704329) Ralstonia pickettii 12D 8019254 YP_002981561.1 CDS Rpic12D_1605 NC_012856.1 1704399 1704680 R KEGG: rso:RSc1613 hypothetical protein; hypothetical protein complement(1704399..1704680) Ralstonia pickettii 12D 8019255 YP_002981562.1 CDS Rpic12D_1606 NC_012856.1 1704677 1706086 R PFAM: protein of unknown function DUF162; KEGG: rso:RSc1612 iron-sulfur binding protein; hypothetical protein complement(1704677..1706086) Ralstonia pickettii 12D 8019256 YP_002981563.1 CDS Rpic12D_1607 NC_012856.1 1706123 1706848 R PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: rso:RSc1611 hypothetical protein; hypothetical protein complement(1706123..1706848) Ralstonia pickettii 12D 8019257 YP_002981564.1 CDS Rpic12D_1608 NC_012856.1 1707089 1707886 D PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: rso:RSc1610 transcription regulator protein; IclR family transcriptional regulator 1707089..1707886 Ralstonia pickettii 12D 8019258 YP_002981565.1 CDS Rpic12D_1609 NC_012856.1 1707954 1709093 R PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: rso:RSc1609 D-alanyl-D-alanine-endopeptidase (penicillin-binding protein); peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 complement(1707954..1709093) Ralstonia pickettii 12D 8019259 YP_002981566.1 CDS Rpic12D_1610 NC_012856.1 1709582 1710289 R PFAM: nitroreductase; KEGG: rso:RSc1608 oxidoreductase protein; nitroreductase complement(1709582..1710289) Ralstonia pickettii 12D 8019260 YP_002981567.1 CDS Rpic12D_1611 NC_012856.1 1710306 1710749 R PFAM: thioesterase superfamily protein; KEGG: bvi:Bcep1808_1377 thioesterase superfamily protein; thioesterase superfamily protein complement(1710306..1710749) Ralstonia pickettii 12D 8019261 YP_002981568.1 CDS Rpic12D_1612 NC_012856.1 1710808 1711725 R PFAM: protein of unknown function DUF6 transmembrane; protein of unknown function DUF250; KEGG: rso:RSc1607 hypothetical protein; hypothetical protein complement(1710808..1711725) Ralstonia pickettii 12D 8019262 YP_002981569.1 CDS Rpic12D_1613 NC_012856.1 1711722 1712729 R PFAM: histone deacetylase superfamily; KEGG: rso:RSc1606 hypothetical protein; histone deacetylase superfamily protein complement(1711722..1712729) Ralstonia pickettii 12D 8019263 YP_002981570.1 CDS Rpic12D_1614 NC_012856.1 1713086 1713667 D TIGRFAM: phasin family protein; KEGG: rso:RSc1605 hypothetical protein; phasin family protein 1713086..1713667 Ralstonia pickettii 12D 8019264 YP_002981571.1 CDS Rpic12D_1615 NC_012856.1 1714008 1714568 D KEGG: rso:RSc1604 hypothetical protein; hypothetical protein 1714008..1714568 Ralstonia pickettii 12D 8019265 YP_002981572.1 CDS Rpic12D_1616 NC_012856.1 1714671 1716452 R TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; biotin/lipoyl attachment domain-containing protein; KEGG: rso:RSc1603 dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase complement(1714671..1716452) Ralstonia pickettii 12D 8019266 YP_002981573.1 CDS Rpic12D_1617 NC_012856.1 1716511 1717083 R PFAM: 20S proteasome A and B subunits; KEGG: rso:RSc1602 hypothetical protein; 20S proteasome subunits A and B complement(1716511..1717083) Ralstonia pickettii 12D 8019267 YP_002981574.1 CDS Rpic12D_1618 NC_012856.1 1717189 1718874 R TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: rso:RSc1601 dihydrolipoamide acetyltransferase; dihydrolipoamide acetyltransferase complement(1717189..1718874) Ralstonia pickettii 12D 8019268 YP_002981575.1 CDS aceE NC_012856.1 1719027 1721717 R E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 complement(1719027..1721717) Ralstonia pickettii 12D 8019269 YP_002981576.1 CDS Rpic12D_1620 NC_012856.1 1722078 1724606 D KEGG: rso:RSc1598 two-component transmembrane sensor histidine kinase transcription regulator protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; PAS fold-3 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; PAC repeat-containing protein; histidine kinase A domain protein; PAS/PAC sensor signal transduction histidine kinase 1722078..1724606 Ralstonia pickettii 12D 8019270 YP_002981577.1 CDS Rpic12D_1621 NC_012856.1 1724647 1725282 D PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: rso:RSc1597 response regulator transcription regulator protein; two component LuxR family transcriptional regulator 1724647..1725282 Ralstonia pickettii 12D 8019271 YP_002981578.1 CDS Rpic12D_1622 NC_012856.1 1725378 1726247 D catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 1725378..1726247 Ralstonia pickettii 12D 8019272 YP_002981579.1 CDS Rpic12D_1623 NC_012856.1 1726342 1728456 D PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: rso:RSc1595 oligopeptidase A; oligopeptidase A 1726342..1728456 Ralstonia pickettii 12D 8019273 YP_002981580.1 CDS Rpic12D_1624 NC_012856.1 1728607 1729416 D TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: endonuclease/exonuclease/phosphatase; KEGG: rso:RSc1593 exodeoxyribonuclease III protein; exodeoxyribonuclease III Xth 1728607..1729416 Ralstonia pickettii 12D 8019274 YP_002981581.1 CDS Rpic12D_1625 NC_012856.1 1729429 1729893 D KEGG: rso:RSc1592 transcription regulator protein; TIGRFAM: homoprotocatechuate degradation operon regulator, HpaR; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; MarR family transcriptional regulator 1729429..1729893 Ralstonia pickettii 12D 8019275 YP_002981582.1 CDS Rpic12D_1626 NC_012856.1 1729900 1730706 R KEGG: rso:RSc1591 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase oxidoreductase protein; TIGRFAM: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PFAM: HpcH/HpaI aldolase; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase complement(1729900..1730706) Ralstonia pickettii 12D 8019276 YP_002981583.1 CDS Rpic12D_1627 NC_012856.1 1730736 1731539 R KEGG: bur:Bcep18194_B1778 4-oxalocrotonate decarboxylase; TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; PFAM: fumarylacetoacetate (FAA) hydrolase; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase complement(1730736..1731539) Ralstonia pickettii 12D 8019277 YP_002981584.1 CDS Rpic12D_1628 NC_012856.1 1731543 1731932 R PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: bur:Bcep18194_B1779 5-carboxymethyl-2-hydroxymuconate isomerase; 5-carboxymethyl-2-hydroxymuconate isomerase complement(1731543..1731932) Ralstonia pickettii 12D 8019278 YP_002981585.1 CDS Rpic12D_1629 NC_012856.1 1731943 1732812 R KEGG: bcm:Bcenmc03_3283 3,4-dihydroxyphenylacetate 2,3-dioxygenase; TIGRFAM: 3,4-dihydroxyphenylacetate 2,3-dioxygenase; PFAM: extradiol ring-cleavage dioxygenase class III protein subunit B; 3,4-dihydroxyphenylacetate 2,3-dioxygenase complement(1731943..1732812) Ralstonia pickettii 12D 8019279 YP_002981586.1 CDS Rpic12D_1630 NC_012856.1 1732855 1734336 R TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: aldehyde Dehydrogenase; KEGG: bur:Bcep18194_B1781 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase complement(1732855..1734336) Ralstonia pickettii 12D 8019280 YP_002981587.1 CDS Rpic12D_1631 NC_012856.1 1734333 1735103 R KEGG: bur:Bcep18194_B1782 5-carboxymethyl-2-hydroxymuconate delta-isomerase; TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit; PFAM: fumarylacetoacetate (FAA) hydrolase; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase subunit HpaG2 complement(1734333..1735103) Ralstonia pickettii 12D 8019281 YP_002981588.1 CDS Rpic12D_1632 NC_012856.1 1735100 1735852 R KEGG: bpd:BURPS668_A1023 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit; TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG1 subunit; PFAM: fumarylacetoacetate (FAA) hydrolase; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase subunit HpaG1 complement(1735100..1735852) Ralstonia pickettii 12D 8019282 YP_002981589.1 CDS Rpic12D_1633 NC_012856.1 1736042 1736332 R PFAM: protein of unknown function DUF1488; KEGG: rso:RSc1590 hypothetical protein; hypothetical protein complement(1736042..1736332) Ralstonia pickettii 12D 8019283 YP_002981590.1 CDS Rpic12D_1634 NC_012856.1 1736865 1738295 R PFAM: amino acid permease-associated region; KEGG: rso:RSc1588 amino-acid transporter transmembrane protein; amino acid permease-associated protein complement(1736865..1738295) Ralstonia pickettii 12D 8019284 YP_002981591.1 CDS Rpic12D_1635 NC_012856.1 1738487 1739560 R involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV complement(1738487..1739560) Ralstonia pickettii 12D 8019285 YP_002981592.1 CDS Rpic12D_1636 NC_012856.1 1739736 1740113 R KEGG: rso:RSc1586 lipoprotein; lipoprotein complement(1739736..1740113) Ralstonia pickettii 12D 8019286 YP_002981593.1 CDS Rpic12D_1637 NC_012856.1 1740429 1741367 D PFAM: aldose 1-epimerase; KEGG: rso:RSc1585 hypothetical protein; aldose 1-epimerase 1740429..1741367 Ralstonia pickettii 12D 8019287 YP_002981594.1 CDS Rpic12D_1638 NC_012856.1 1741377 1741712 R TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase; KEGG: smt:Smal_1372 alkylhydroperoxidase like protein, AhpD family; alkylhydroperoxidase complement(1741377..1741712) Ralstonia pickettii 12D 8019288 YP_002981595.1 CDS Rpic12D_1639 NC_012856.1 1741827 1742750 D PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bpy:Bphyt_5450 transcriptional regulator, AraC family; AraC family transcriptional regulator 1741827..1742750 Ralstonia pickettii 12D 8019289 YP_002981596.1 CDS Rpic12D_1640 NC_012856.1 1743244 1743675 R PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: rso:RSc1584 transcription regulator protein; MerR family transcriptional regulator complement(1743244..1743675) Ralstonia pickettii 12D 8019291 YP_002981597.1 CDS ihfA NC_012856.1 1743747 1744163 R This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha complement(1743747..1744163) Ralstonia pickettii 12D 8019292 YP_002981598.1 CDS pheT NC_012856.1 1744242 1746671 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta complement(1744242..1746671) Ralstonia pickettii 12D 8019293 YP_002981599.1 CDS pheS NC_012856.1 1746735 1747769 R catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha complement(1746735..1747769) Ralstonia pickettii 12D 8019294 YP_002981600.1 CDS rplT NC_012856.1 1747912 1748268 R binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 complement(1747912..1748268) Ralstonia pickettii 12D 8019295 YP_002981601.1 CDS rpmI NC_012856.1 1748297 1748494 R TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; KEGG: rso:RSc1579 50S ribosomal protein L35; 50S ribosomal protein L35 complement(1748297..1748494) Ralstonia pickettii 12D 8019296 YP_002981602.1 CDS thrS NC_012856.1 1749226 1751133 R catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase complement(1749226..1751133) Ralstonia pickettii 12D 8019298 YP_002981603.1 CDS Rpic12D_1648 NC_012856.1 1751606 1753831 R KEGG: rso:RSc1576 GTP pyrophosphokinase; TIGRFAM: RelA/SpoT family protein; PFAM: RelA/SpoT domain protein; TGS domain protein; amino acid-binding ACT domain protein; (p)ppGpp synthetase I SpoT/RelA complement(1751606..1753831) Ralstonia pickettii 12D 8019300 YP_002981604.1 CDS Rpic12D_1649 NC_012856.1 1753871 1754239 R PFAM: endoribonuclease L-PSP; KEGG: rso:RSc1575 hypothetical protein; endoribonuclease L-PSP complement(1753871..1754239) Ralstonia pickettii 12D 8019301 YP_002981605.1 CDS Rpic12D_1650 NC_012856.1 1754270 1755139 R PFAM: alpha/beta hydrolase fold; KEGG: rso:RSc1574 hydrolase protein; alpha/beta hydrolase fold protein complement(1754270..1755139) Ralstonia pickettii 12D 8019302 YP_002981606.1 CDS Rpic12D_1651 NC_012856.1 1755285 1756064 R catalyzes the formation of acetoacetate from 3-hydroxybutyrate; 3-hydroxybutyrate dehydrogenase complement(1755285..1756064) Ralstonia pickettii 12D 8019303 YP_002981607.1 CDS Rpic12D_1652 NC_012856.1 1756087 1756722 R KEGG: dac:Daci_4265 3-oxoacid CoA-transferase, B subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B complement(1756087..1756722) Ralstonia pickettii 12D 8019304 YP_002981608.1 CDS Rpic12D_1653 NC_012856.1 1756733 1757434 R KEGG: pol:Bpro_1905 3-oxoacid CoA-transferase, subunit A; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A complement(1756733..1757434) Ralstonia pickettii 12D 8019305 YP_002981609.1 CDS Rpic12D_1654 NC_012856.1 1757587 1758132 D KEGG: rso:RSc1569 transcription regulator protein; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; PAS fold domain protein; SMART: regulatory protein LuxR; PAS domain containing protein; LuxR family transcriptional regulator 1757587..1758132 Ralstonia pickettii 12D 8019306 YP_002981610.1 CDS Rpic12D_1655 NC_012856.1 1758144 1758929 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: rso:RSc1568 short chain dehydrogenase; short chain dehydrogenase complement(1758144..1758929) Ralstonia pickettii 12D 8019307 YP_002981611.1 CDS Rpic12D_1656 NC_012856.1 1759153 1760838 D PFAM: electron transfer flavoprotein-ubiquinone oxidoreductase; FAD dependent oxidoreductase; KEGG: rso:RSc1567 electron transfer flavoprotein-ubiquinone oxidoreductase; electron-transferring-flavoprotein dehydrogenase 1759153..1760838 Ralstonia pickettii 12D 8019308 YP_002981612.1 CDS Rpic12D_1657 NC_012856.1 1760907 1762007 R catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase complement(1760907..1762007) Ralstonia pickettii 12D 8019309 YP_002981613.1 CDS Rpic12D_1658 NC_012856.1 1762093 1762506 R PFAM: peptidylprolyl isomerase FKBP-type; KEGG: rso:RSc1565 FKBP-type peptidyl-prolyl cis-trans isomerase signal peptide protein; peptidyl-prolyl isomerase complement(1762093..1762506) Ralstonia pickettii 12D 8019310 YP_002981614.1 CDS Rpic12D_1659 NC_012856.1 1762601 1764508 R PFAM: phospholipid/glycerol acyltransferase; major facilitator superfamily MFS_1; SMART: phospholipid/glycerol acyltransferase; KEGG: rso:RSc1564 hypothetical protein; phospholipid/glycerol acyltransferase complement(1762601..1764508) Ralstonia pickettii 12D 8019311 YP_002981615.1 CDS Rpic12D_1660 NC_012856.1 1764591 1765046 R PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: rso:RSc1563 hypothetical protein; hypothetical protein complement(1764591..1765046) Ralstonia pickettii 12D 8019312 YP_002981616.1 CDS Rpic12D_1661 NC_012856.1 1765238 1766620 D catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; O-acetylhomoserine aminocarboxypropyltransferase 1765238..1766620 Ralstonia pickettii 12D 8019313 YP_002981617.1 CDS Rpic12D_1662 NC_012856.1 1766620 1767444 D PFAM: alpha/beta hydrolase fold; Thioesterase; KEGG: rso:RSc1561 hydrolase protein; alpha/beta hydrolase fold protein 1766620..1767444 Ralstonia pickettii 12D 8019314 YP_002981618.1 CDS Rpic12D_1663 NC_012856.1 1767466 1767783 D KEGG: rso:RSc1560 transmembrane protein; hypothetical protein 1767466..1767783 Ralstonia pickettii 12D 8019315 YP_002981619.1 CDS Rpic12D_1664 NC_012856.1 1767788 1769119 R TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; KEGG: rso:RSc1559 ribonuclease BN transmembrane protein; ribonuclease BN complement(1767788..1769119) Ralstonia pickettii 12D 8019316 YP_002981620.1 CDS Rpic12D_1665 NC_012856.1 1769188 1769781 D TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase; NADPH-dependent FMN reductase; KEGG: rso:RSc1558 TRP repressor binding protein; flavoprotein WrbA 1769188..1769781 Ralstonia pickettii 12D 8019317 YP_002981621.1 CDS Rpic12D_1666 NC_012856.1 1769778 1770170 D KEGG: rso:RSc1557 hypothetical protein; hypothetical protein 1769778..1770170 Ralstonia pickettii 12D 8019318 YP_002981622.1 CDS Rpic12D_1667 NC_012856.1 1770177 1771589 D PFAM: FAD linked oxidase domain protein; KEGG: rso:RSc1556 oxidoreductase protein; FAD linked oxidase domain-containing protein 1770177..1771589 Ralstonia pickettii 12D 8019319 YP_002981623.1 CDS Rpic12D_1668 NC_012856.1 1771607 1771810 R KEGG: rso:RSc1555 hypothetical protein; hypothetical protein complement(1771607..1771810) Ralstonia pickettii 12D 8019320 YP_002981624.1 CDS Rpic12D_1669 NC_012856.1 1772183 1772380 D KEGG: hypothetical protein; hypothetical protein 1772183..1772380 Ralstonia pickettii 12D 8019321 YP_002981625.1 CDS Rpic12D_1670 NC_012856.1 1772837 1773679 R KEGG: dps:DP2557 hypothetical protein; hypothetical protein complement(1772837..1773679) Ralstonia pickettii 12D 8019323 YP_002981626.1 CDS Rpic12D_1671 NC_012856.1 1773666 1773965 R KEGG: pfl:PFL_5241 hypothetical protein; hypothetical protein complement(1773666..1773965) Ralstonia pickettii 12D 8019324 YP_002981627.1 CDS Rpic12D_1672 NC_012856.1 1774621 1775916 R PFAM: OmpA/MotB domain protein; KEGG: bma:BMAA1914 hypothetical protein; OmpA/MotB domain-containing protein complement(1774621..1775916) Ralstonia pickettii 12D 8019325 YP_002981628.1 CDS Rpic12D_1673 NC_012856.1 1775916 1779722 R TIGRFAM: type VI secretion protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: cti:RALTA_A0621 replication related protein; type VI secretion protein IcmF complement(1775916..1779722) Ralstonia pickettii 12D 8019326 YP_002981629.1 CDS Rpic12D_1674 NC_012856.1 1779735 1780982 R TIGRFAM: type VI secretion system OmpA/MotB family protein; type IV / VI secretion system protein, DotU family; PFAM: OmpA/MotB domain protein; KEGG: reh:H16_A0662 outer membrane protein; type VI secretion system OmpA/MotB family protein complement(1779735..1780982) Ralstonia pickettii 12D 8019327 YP_002981630.1 CDS Rpic12D_1675 NC_012856.1 1781021 1782364 R TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; KEGG: reh:H16_A0661 bacterial protein of unknown function; type VI secretion protein complement(1781021..1782364) Ralstonia pickettii 12D 8019328 YP_002981631.1 CDS Rpic12D_1676 NC_012856.1 1782373 1782891 R TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: reh:H16_A0660 hypothetical protein; type VI secretion lipoprotein complement(1782373..1782891) Ralstonia pickettii 12D 8019329 YP_002981632.1 CDS Rpic12D_1677 NC_012856.1 1782894 1783169 R PFAM: PAAR repeat-containing protein; KEGG: bph:Bphy_7018 PaaR repeat-containing protein; PAAR repeat-containing protein complement(1782894..1783169) Ralstonia pickettii 12D 8019330 YP_002981633.1 CDS Rpic12D_1678 NC_012856.1 1783321 1783587 R KEGG: bpt:Bpet2500 hypothetical protein; hypothetical protein complement(1783321..1783587) Ralstonia pickettii 12D 8019331 YP_002981634.1 CDS Rpic12D_1679 NC_012856.1 1783898 1787044 R TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: cti:RALTA_A0611 replication/virulence associated protein; Vgr-related; ImpA family type VI secretion-associated protein complement(1783898..1787044) Ralstonia pickettii 12D 8019332 YP_002981635.1 CDS Rpic12D_1680 NC_012856.1 1787178 1787822 R KEGG: dar:Daro_0088 hypothetical protein; hypothetical protein complement(1787178..1787822) Ralstonia pickettii 12D 8019333 YP_002981636.1 CDS Rpic12D_1681 NC_012856.1 1787905 1788390 R TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: reh:H16_A0654 hemolysin-coregulated protein; type VI secretion system effector complement(1787905..1788390) Ralstonia pickettii 12D 8019334 YP_002981637.1 CDS Rpic12D_1682 NC_012856.1 1788527 1790020 R TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: cti:RALTA_A0609 replication/virulence associated protein; DUF877; EvpB type VI secretion protein complement(1788527..1790020) Ralstonia pickettii 12D 8019335 YP_002981638.1 CDS Rpic12D_1683 NC_012856.1 1790070 1790609 R TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: cti:RALTA_A0608 replication/virulence associated protein; DUF770; type VI secretion protein complement(1790070..1790609) Ralstonia pickettii 12D 8019336 YP_002981639.1 CDS Rpic12D_1684 NC_012856.1 1790661 1793357 R KEGG: reh:H16_A0651 ATP-dependent protease Clp, ATPase subunit; TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA-2 domain protein; ATPase AAA; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; type VI secretion ATPase, ClpV1 family complement(1790661..1793357) Ralstonia pickettii 12D 8019337 YP_002981640.1 CDS Rpic12D_1685 NC_012856.1 1793799 1794401 D KEGG: reh:H16_A0650 hypothetical protein; hypothetical protein 1793799..1794401 Ralstonia pickettii 12D 8019338 YP_002981641.1 CDS Rpic12D_1686 NC_012856.1 1794391 1795218 D PFAM: virulence protein SciE type; KEGG: reh:H16_A0649 ImpE family protein; virulence protein SciE type 1794391..1795218 Ralstonia pickettii 12D 8019339 YP_002981642.1 CDS Rpic12D_1687 NC_012856.1 1795420 1797642 D KEGG: cti:RALTA_A0612 conserved hypothetical protein; type V secretory pathway, adhesin AidA; ribonucleases G and E; ribonuclease G and E 1795420..1797642 Ralstonia pickettii 12D 8019340 YP_002981643.1 CDS Rpic12D_1688 NC_012856.1 1797647 1799224 D KEGG: reh:H16_A0659 hypothetical protein; hypothetical protein 1797647..1799224 Ralstonia pickettii 12D 8019341 YP_002981644.1 CDS Rpic12D_1689 NC_012856.1 1799230 1799751 D TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; KEGG: reh:H16_A0648 hypothetical protein; type VI secretion system lysozyme-like protein 1799230..1799751 Ralstonia pickettii 12D 8019342 YP_002981645.1 CDS Rpic12D_1690 NC_012856.1 1799756 1801636 D TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; KEGG: cti:RALTA_A0604 replication/virulence associated protein; DUF879; type VI secretion protein 1799756..1801636 Ralstonia pickettii 12D 8019343 YP_002981646.1 CDS Rpic12D_1691 NC_012856.1 1801639 1802679 D TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; KEGG: reh:H16_A0646 hypothetical protein; type VI secretion protein 1801639..1802679 Ralstonia pickettii 12D 8019344 YP_002981647.1 CDS Rpic12D_1692 NC_012856.1 1802666 1803748 D TIGRFAM: type VI secretion-associated protein, ImpA family; PFAM: ImpA domain protein; KEGG: reh:H16_A0645 uncharacterized protein conserved in bacteria,ImpA-related; type VI secretion-associated protein, ImpA family 1802666..1803748 Ralstonia pickettii 12D 8019345 YP_002981648.1 CDS Rpic12D_1693 NC_012856.1 1803829 1804104 D KEGG: bvi:Bcep1808_6345 diguanylate cyclase; response regulator receiver protein 1803829..1804104 Ralstonia pickettii 12D 8019346 YP_002981649.1 CDS Rpic12D_1694 NC_012856.1 1804157 1804627 R PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: bmj:BMULJ_01148 Lrp/AsnC family transcriptional regulator; AsnC family transcriptional regulator complement(1804157..1804627) Ralstonia pickettii 12D 8019347 YP_002981650.1 CDS Rpic12D_1695 NC_012856.1 1804773 1806251 D PFAM: aminotransferase class V; protein of unknown function DUF442; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: bam:Bamb_5203 aminotransferase, class V; class V aminotransferase 1804773..1806251 Ralstonia pickettii 12D 8019348 YP_002981651.1 CDS Rpic12D_1696 NC_012856.1 1806270 1806791 R PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: rso:RS05577 transcription regulator protein; AsnC family transcriptional regulator complement(1806270..1806791) Ralstonia pickettii 12D 8019349 YP_002981652.1 CDS Rpic12D_1697 NC_012856.1 1806937 1807953 D catalyzes conversion of 1-aminocyclopropane-1-carboxylate to ammonia and alpha-ketobutyrate; 1-aminocyclopropane-1-carboxylate deaminase 1806937..1807953 Ralstonia pickettii 12D 8019350 YP_002981653.1 CDS Rpic12D_1698 NC_012856.1 1808261 1808680 D KEGG: cti:RALTA_A2660 lipoprotein; lipoprotein 1808261..1808680 Ralstonia pickettii 12D 8019351 YP_002981654.1 CDS Rpic12D_1699 NC_012856.1 1808685 1809518 R PFAM: aldo/keto reductase; KEGG: reu:Reut_A2881 aldo/keto reductase; aldo/keto reductase complement(1808685..1809518) Ralstonia pickettii 12D 8019352 YP_002981655.1 CDS Rpic12D_1700 NC_012856.1 1809608 1810843 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: rme:Rmet_4091 NADH:flavin oxidoreductase/NADH oxidase; NADH:flavin oxidoreductase complement(1809608..1810843) Ralstonia pickettii 12D 8019353 YP_002981656.1 CDS Rpic12D_1701 NC_012856.1 1810932 1811390 D PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR; KEGG: rso:RS02983 transcription regulator protein; MerR family transcriptional regulator 1810932..1811390 Ralstonia pickettii 12D 8019354 YP_002981657.1 CDS Rpic12D_1702 NC_012856.1 1811636 1811785 D KEGG: reh:H16_B2022 hypothetical protein; hypothetical protein 1811636..1811785 Ralstonia pickettii 12D 8019355 YP_002981658.1 CDS Rpic12D_1703 NC_012856.1 1811803 1812444 R PFAM: lysine exporter protein (LYSE/YGGA); KEGG: reu:Reut_B3694 lysine exporter protein LysE/YggA; Lysine exporter protein LysE/YggA complement(1811803..1812444) Ralstonia pickettii 12D 8019356 YP_002981659.1 CDS Rpic12D_1704 NC_012856.1 1812519 1813415 D specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein 1812519..1813415 Ralstonia pickettii 12D 8019357 YP_002981660.1 CDS Rpic12D_1705 NC_012856.1 1813420 1814280 R PFAM: beta-lactamase domain protein; KEGG: rso:RSc1544 hypothetical protein; beta-lactamase domain-containing protein complement(1813420..1814280) Ralstonia pickettii 12D 8019358 YP_002981661.1 CDS Rpic12D_1706 NC_012856.1 1814382 1814747 D PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: rso:RSc1543 transcription regulator protein; ArsR family transcriptional regulator 1814382..1814747 Ralstonia pickettii 12D 8019359 YP_002981662.1 CDS Rpic12D_1707 NC_012856.1 1814750 1815571 D PFAM: protein of unknown function DUF81; KEGG: rso:RSc1541 hypothetical protein; hypothetical protein 1814750..1815571 Ralstonia pickettii 12D 8019360 YP_002981663.1 CDS Rpic12D_1708 NC_012856.1 1815805 1816296 D TIGRFAM: phosphohistidine phosphatase SixA; PFAM: phosphoglycerate mutase; KEGG: rso:RSc1539 hydrolase protein; phosphohistidine phosphatase SixA 1815805..1816296 Ralstonia pickettii 12D 8019362 YP_002981664.1 CDS Rpic12D_1709 NC_012856.1 1816425 1817258 D KEGG: rso:RSc1538 hypothetical protein; hypothetical protein 1816425..1817258 Ralstonia pickettii 12D 8019363 YP_002981665.1 CDS Rpic12D_1710 NC_012856.1 1817339 1818877 R PFAM: Ppx/GppA phosphatase; KEGG: rso:RSc1537 exopolyphosphatase protein; Ppx/GppA phosphatase complement(1817339..1818877) Ralstonia pickettii 12D 8019364 YP_002981666.1 CDS Rpic12D_1711 NC_012856.1 1819008 1821218 D catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 1819008..1821218 Ralstonia pickettii 12D 8019365 YP_002981667.1 CDS Rpic12D_1712 NC_012856.1 1821295 1822623 R KEGG: rso:RSc1535 phosphate regulon two-component sensor kinase transcription regulator protein; TIGRFAM: phosphate regulon sensor kinase PhoR; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase complement(1821295..1822623) Ralstonia pickettii 12D 8019366 YP_002981668.1 CDS Rpic12D_1713 NC_012856.1 1822718 1823431 R KEGG: rso:RSc1534 phosphate regulon two-component response regulator transcription regulator protein; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; two component transcriptional regulator PhoB complement(1822718..1823431) Ralstonia pickettii 12D 8019367 YP_002981669.1 CDS Rpic12D_1714 NC_012856.1 1823456 1824169 R TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: rso:RSc1533 phosphate transporter PhoU; phosphate uptake regulator PhoU complement(1823456..1824169) Ralstonia pickettii 12D 8019368 YP_002981670.1 CDS pstB NC_012856.1 1824210 1825001 R ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein complement(1824210..1825001) Ralstonia pickettii 12D 8019369 YP_002981671.1 CDS pstA NC_012856.1 1824998 1825882 R Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PtsA complement(1824998..1825882) Ralstonia pickettii 12D 8019370 YP_002981672.1 CDS pstC NC_012856.1 1825921 1826859 R part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PstC complement(1825921..1826859) Ralstonia pickettii 12D 8019371 YP_002981673.1 CDS Rpic12D_1718 NC_012856.1 1827016 1828047 R TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: rso:RSc1529 phosphate ABC transporter phosphate-binding protein; phosphate ABC transporter substrate-binding protein complement(1827016..1828047) Ralstonia pickettii 12D 8019372 YP_002981674.1 CDS glmM NC_012856.1 1828239 1829582 R catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase complement(1828239..1829582) Ralstonia pickettii 12D 8019373 YP_002981675.1 CDS Rpic12D_1720 NC_012856.1 1829692 1830489 R KEGG: rso:RSc1527 7,8-dihydropteroate synthase protein; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; dihydropteroate synthase complement(1829692..1830489) Ralstonia pickettii 12D 8019374 YP_002981676.1 CDS Rpic12D_1721 NC_012856.1 1830708 1832594 R KEGG: rso:RSc1526 ATP-dependent zinc metallopeptidase; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; peptidase M41 FtsH extracellular; ATPase AAA; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATP-dependent metalloprotease FtsH complement(1830708..1832594) Ralstonia pickettii 12D 8019375 YP_002981677.1 CDS Rpic12D_1722 NC_012856.1 1832726 1833391 R PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: rso:RSc1525 ribosomal RNA large subunit methyltransferase J; ribosomal RNA methyltransferase RrmJ/FtsJ complement(1832726..1833391) Ralstonia pickettii 12D 8019376 YP_002981678.1 CDS Rpic12D_1723 NC_012856.1 1833500 1834000 D PFAM: protein of unknown function UPF0044; KEGG: rso:RSc1524 hypothetical protein; hypothetical protein 1833500..1834000 Ralstonia pickettii 12D 8019377 YP_002981679.1 CDS Rpic12D_1724 NC_012856.1 1834062 1834529 R KEGG: rso:RSc1523 hypothetical protein; hypothetical protein complement(1834062..1834529) Ralstonia pickettii 12D 8019378 YP_002981680.1 CDS greA NC_012856.1 1834550 1835026 R necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA complement(1834550..1835026) Ralstonia pickettii 12D 8019379 YP_002981681.1 CDS carb NC_012856.1 1835222 1838467 R four carb-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; carb is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit complement(1835222..1838467) Ralstonia pickettii 12D 8019380 YP_002981682.1 CDS Rpic12D_1727 NC_012856.1 1838484 1839158 R PFAM: lysine exporter protein (LYSE/YGGA); KEGG: rso:RSc1520 leucine export protein LeuE; leucine export protein LeuE complement(1838484..1839158) Ralstonia pickettii 12D 8019381 YP_002981683.1 CDS Rpic12D_1728 NC_012856.1 1839180 1840316 R catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit complement(1839180..1840316) Ralstonia pickettii 12D 8019382 YP_002981684.1 CDS prpE NC_012856.1 1840662 1842563 R catalyzes the formation of propionyl-CoA using propionate as a substrate; PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A; not expressed in Escherichia coli when grown on propionate/minimal media; ATP-dependent; propionyl-CoA synthetase complement(1840662..1842563) Ralstonia pickettii 12D 8019383 YP_002981685.1 CDS Rpic12D_1730 NC_012856.1 1842707 1844257 R PFAM: MLTD_N domain protein; peptidoglycan-binding LysM; Lytic transglycosylase catalytic; SMART: peptidoglycan-binding LysM; KEGG: rso:RSc1516 membrane-bound lytic murein transglycosylase-like lipoprotein; MLTD_N domain-containing protein complement(1842707..1844257) Ralstonia pickettii 12D 8019384 YP_002981686.1 CDS Rpic12D_1731 NC_012856.1 1844396 1845235 R KEGG: rso:RSc1515 hydroxyacylglutathione hydrolase protein; TIGRFAM: hydroxyacylglutathione hydrolase; PFAM: beta-lactamase domain protein; hydroxyacylglutathione hydrolase complement(1844396..1845235) Ralstonia pickettii 12D 8019385 YP_002981687.1 CDS Rpic12D_1732 NC_012856.1 1845351 1846139 D PFAM: Methyltransferase type 11; KEGG: rso:RSc1514 hypothetical protein; type 11 methyltransferase 1845351..1846139 Ralstonia pickettii 12D 8019386 YP_002981688.1 CDS rnhA NC_012856.1 1846179 1846625 D An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 1846179..1846625 Ralstonia pickettii 12D 8019387 YP_002981689.1 CDS Rpic12D_1734 NC_012856.1 1846643 1847152 R KEGG: cvi:CV_1202 ribonuclease precursor; hypothetical protein complement(1846643..1847152) Ralstonia pickettii 12D 8019388 YP_002981690.1 CDS Rpic12D_1735 NC_012856.1 1847188 1847640 R PFAM: glycoside hydrolase family 24; KEGG: bac:BamMC406_4784 lysozyme; lysozyme complement(1847188..1847640) Ralstonia pickettii 12D 8019389 YP_002981691.1 CDS Rpic12D_1736 NC_012856.1 1847630 1848217 R KEGG: bac:BamMC406_4783 hypothetical protein; hypothetical protein complement(1847630..1848217) Ralstonia pickettii 12D 8019390 YP_002981692.1 CDS Rpic12D_1737 NC_012856.1 1848498 1849166 R KEGG: bac:BamMC406_4782 hypothetical protein; hypothetical protein complement(1848498..1849166) Ralstonia pickettii 12D 8019391 YP_002981693.1 CDS Rpic12D_1738 NC_012856.1 1849415 1850074 D PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; KEGG: bac:BamMC406_4781 LuxR family transcriptional regulator; two component LuxR family transcriptional regulator 1849415..1850074 Ralstonia pickettii 12D 8019392 YP_002981694.1 CDS Rpic12D_1739 NC_012856.1 1850247 1850525 D PFAM: protein of unknown function DUF1488; KEGG: rso:RSc1512 hypothetical protein; hypothetical protein 1850247..1850525 Ralstonia pickettii 12D 8019393 YP_002981695.1 CDS Rpic12D_1740 NC_012856.1 1850616 1852124 R PFAM: SpoVR family protein; KEGG: rme:Rmet_3906 hypothetical protein; SpoVR family protein complement(1850616..1852124) Ralstonia pickettii 12D 8019394 YP_002981696.1 CDS Rpic12D_1741 NC_012856.1 1852242 1853504 R PFAM: protein of unknown function DUF444; KEGG: reu:Reut_B3554 hypothetical protein; hypothetical protein complement(1852242..1853504) Ralstonia pickettii 12D 8019395 YP_002981697.1 CDS Rpic12D_1742 NC_012856.1 1853560 1855482 R PFAM: PrkA AAA domain protein; PrkA serine kinase; SMART: PrkA AAA domain protein; KEGG: cti:RALTA_B0548 conserved hypothetical protein, PrkA serine protein kinase domain; putative serine protein kinase PrkA complement(1853560..1855482) Ralstonia pickettii 12D 8019396 YP_002981698.1 CDS Rpic12D_1743 NC_012856.1 1856349 1857251 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: reh:H16_A1704 transcriptional regulator, LysR-family; LysR family transcriptional regulator complement(1856349..1857251) Ralstonia pickettii 12D 8019397 YP_002981699.1 CDS Rpic12D_1744 NC_012856.1 1857530 1860565 D PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; carbon monoxide dehydrogenase subunit G; cyclase/dehydrase; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; Activator of Hsp90 ATPase 1 family protein; KEGG: reu:Reut_C5890 xanthine dehydrogenase, molybdenum binding subunit apoprotein; molybdopterin-binding aldehyde oxidase and xanthine dehydrogenase 1857530..1860565 Ralstonia pickettii 12D 8019398 YP_002981700.1 CDS Rpic12D_1745 NC_012856.1 1860562 1861377 D PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: reh:H16_A1702 FAD binding domain in molybdopterin dehydrogenase; carbon-monoxide dehydrogenase 1860562..1861377 Ralstonia pickettii 12D 8019399 YP_002981701.1 CDS Rpic12D_1746 NC_012856.1 1861374 1861949 D PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: reh:H16_A1701 aerobic-type carbon monoxide dehydrogenase homolog, 2Fe-2S iron-sulfur subunit; (2Fe-2S)-binding domain-containing protein 1861374..1861949 Ralstonia pickettii 12D 8019400 YP_002981702.1 CDS Rpic12D_1747 NC_012856.1 1861942 1863495 D PFAM: AMP-dependent synthetase and ligase; KEGG: reu:Reut_C5887 AMP-dependent synthetase and ligase; AMP-dependent synthetase and ligase 1861942..1863495 Ralstonia pickettii 12D 8019401 YP_002981703.1 CDS Rpic12D_1748 NC_012856.1 1863500 1864321 D PFAM: enoyl-CoA hydratase/isomerase; KEGG: reu:Reut_C5886 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 1863500..1864321 Ralstonia pickettii 12D 8019402 YP_002981704.1 CDS Rpic12D_1750 NC_012856.1 1866012 1866233 D hypothetical protein 1866012..1866233 Ralstonia pickettii 12D 8019404 YP_002981705.1 CDS Rpic12D_1751 NC_012856.1 1866491 1867219 R 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon complement(1866491..1867219) Ralstonia pickettii 12D 8019406 YP_002981706.1 CDS purU NC_012856.1 1867245 1868111 R produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase complement(1867245..1868111) Ralstonia pickettii 12D 8019407 YP_002981707.1 CDS Rpic12D_1753 NC_012856.1 1868120 1868974 R PFAM: NUDIX hydrolase; KEGG: rso:RSc1874 hypothetical protein; NUDIX hydrolase complement(1868120..1868974) Ralstonia pickettii 12D 8019408 YP_002981708.1 CDS Rpic12D_1754 NC_012856.1 1869079 1869474 D KEGG: rso:RSc1875 hypothetical protein; hypothetical protein 1869079..1869474 Ralstonia pickettii 12D 8019409 YP_002981709.1 CDS Rpic12D_1755 NC_012856.1 1869503 1870060 R KEGG: rso:RSc1876 hypothetical protein; hypothetical protein complement(1869503..1870060) Ralstonia pickettii 12D 8019410 YP_002981710.1 CDS Rpic12D_1756 NC_012856.1 1870321 1871223 D PFAM: aspartyl/Asparaginyl beta-hydroxylase; KEGG: rso:RSc1877 aspartyl/asparaginyl beta-hydroxylase transmembrane protein; aspartyl/asparaginyl beta-hydroxylase 1870321..1871223 Ralstonia pickettii 12D 8019411 YP_002981711.1 CDS Rpic12D_1757 NC_012856.1 1871533 1872150 D KEGG: rso:RSc1878 lipoprotein; lipoprotein 1871533..1872150 Ralstonia pickettii 12D 8019412 YP_002981712.1 CDS Rpic12D_1758 NC_012856.1 1872575 1873549 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RSc1880 transcription regulator protein; LysR family transcriptional regulator 1872575..1873549 Ralstonia pickettii 12D 8019413 YP_002981713.1 CDS Rpic12D_1759 NC_012856.1 1873546 1875045 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rso:RSc1881 transmembrane oxidoreductase protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1873546..1875045 Ralstonia pickettii 12D 8019414 YP_002981714.1 CDS Rpic12D_1760 NC_012856.1 1875042 1876025 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc1882 peptide ABC transporter transmembrane protein; binding-protein-dependent transport system inner membrane protein 1875042..1876025 Ralstonia pickettii 12D 8019415 YP_002981715.1 CDS Rpic12D_1761 NC_012856.1 1876022 1876951 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc1883 peptide ABC transporter transmembrane protein; binding-protein-dependent transport system inner membrane protein 1876022..1876951 Ralstonia pickettii 12D 8019416 YP_002981716.1 CDS Rpic12D_1762 NC_012856.1 1876948 1877952 D KEGG: rso:RSc1884 oligopeptide ATP-binding ABC transporter protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter; SMART: AAA ATPase; peptide ABC transporter ATPase 1876948..1877952 Ralstonia pickettii 12D 8019417 YP_002981717.1 CDS Rpic12D_1763 NC_012856.1 1877949 1878950 D KEGG: rso:RSc1885 oligopeptide ATP-binding ABC transporter protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter; SMART: AAA ATPase; peptide ABC transporter ATPase 1877949..1878950 Ralstonia pickettii 12D 8019418 YP_002981718.1 CDS Rpic12D_1764 NC_012856.1 1878988 1880568 D PFAM: extracellular solute-binding protein family 5; KEGG: rso:RSc1886 periplasmic dipeptide transport protein precursor; family 5 extracellular solute-binding protein 1878988..1880568 Ralstonia pickettii 12D 8019419 YP_002981719.1 CDS Rpic12D_1765 NC_012856.1 1880574 1882466 D PFAM: BAAT/Acyl-CoA thioester hydrolase; acyl-CoA thioester hydrolase/bile acid-CoA amino acid N-acetyltransferase; KEGG: rso:RSc1887 acyl coenzyme A thioester hydrolase protein; bile acid-CoA:amino acid N-acyltransferase 1880574..1882466 Ralstonia pickettii 12D 8019420 YP_002981720.1 CDS Rpic12D_1766 NC_012856.1 1882463 1883053 D TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase; KEGG: rso:RSc1888 hypothetical protein; peroxidase-like protein 1882463..1883053 Ralstonia pickettii 12D 8019421 YP_002981721.1 CDS Rpic12D_1767 NC_012856.1 1883125 1885422 R PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: cti:RALTA_B0461 transmembrane isoquinoline 1-oxidoreductase (beta subunit) oxidoreductase protein; molybdopterin-binding aldehyde oxidase and xanthine dehydrogenase complement(1883125..1885422) Ralstonia pickettii 12D 8019422 YP_002981722.1 CDS Rpic12D_1768 NC_012856.1 1885419 1885886 R PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: rso:RSc1890 isoquinoline 1-oxidoreductase alpha subunit; (2Fe-2S)-binding domain-containing protein complement(1885419..1885886) Ralstonia pickettii 12D 8019423 YP_002981723.1 CDS Rpic12D_1769 NC_012856.1 1886260 1886541 R KEGG: rso:RSc1891 hypothetical protein; hypothetical protein complement(1886260..1886541) Ralstonia pickettii 12D 8019425 YP_002981724.1 CDS Rpic12D_1770 NC_012856.1 1887067 1889073 D PFAM: peptidase S15; X-Pro dipeptidyl-peptidase domain protein; KEGG: rha:RHA1_ro04896 hypothetical protein; peptidase S15 1887067..1889073 Ralstonia pickettii 12D 8019426 YP_002981725.1 CDS Rpic12D_1771 NC_012856.1 1889598 1891160 D PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: bpy:Bphyt_0409 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 1889598..1891160 Ralstonia pickettii 12D 8019427 YP_002981726.1 CDS Rpic12D_1772 NC_012856.1 1891465 1892481 D KEGG: bac:BamMC406_4780 hypothetical protein; hypothetical protein 1891465..1892481 Ralstonia pickettii 12D 8019428 YP_002981727.1 CDS Rpic12D_1773 NC_012856.1 1892486 1893289 D KEGG: cti:RALTA_A2224 hypothetical protein; hypothetical protein 1892486..1893289 Ralstonia pickettii 12D 8019429 YP_002981728.1 CDS Rpic12D_1774 NC_012856.1 1893414 1895477 R PFAM: Na+/solute symporter; KEGG: rso:RSc1951 solute:Na+ symporter permease transmembrane protein; Na+/solute symporter complement(1893414..1895477) Ralstonia pickettii 12D 8019430 YP_002981729.1 CDS Rpic12D_1775 NC_012856.1 1895500 1897482 R Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase complement(1895500..1897482) Ralstonia pickettii 12D 8019431 YP_002981730.1 CDS Rpic12D_1776 NC_012856.1 1897719 1898645 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RSc1953 hypothetical protein; hypothetical protein 1897719..1898645 Ralstonia pickettii 12D 8019432 YP_002981731.1 CDS Rpic12D_1777 NC_012856.1 1898734 1899273 D PFAM: conserved hypothetical protein; KEGG: rso:RSc1954 hypothetical protein; hypothetical protein 1898734..1899273 Ralstonia pickettii 12D 8019433 YP_002981732.1 CDS Rpic12D_1778 NC_012856.1 1899463 1900998 D TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: rso:RSc1955 fumarate hydratase protein; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha 1899463..1900998 Ralstonia pickettii 12D 8019434 YP_002981733.1 CDS Rpic12D_1779 NC_012856.1 1901019 1901861 D converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 1901019..1901861 Ralstonia pickettii 12D 8019435 YP_002981734.1 CDS Rpic12D_1780 NC_012856.1 1901906 1903174 R PFAM: sodium:dicarboxylate symporter; KEGG: rso:RSc1957 glutamate symport transmembrane protein; sodium:dicarboxylate symporter complement(1901906..1903174) Ralstonia pickettii 12D 8019436 YP_002981735.1 CDS Rpic12D_1781 NC_012856.1 1903543 1903884 D KEGG: rso:RSc1958 hypothetical protein; hypothetical protein 1903543..1903884 Ralstonia pickettii 12D 8019437 YP_002981736.1 CDS Rpic12D_1782 NC_012856.1 1904021 1906084 D Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 1904021..1906084 Ralstonia pickettii 12D 8019438 YP_002981737.1 CDS Rpic12D_1783 NC_012856.1 1906081 1906257 D KEGG: rso:RS02295 hypothetical protein; hypothetical protein 1906081..1906257 Ralstonia pickettii 12D 8019439 YP_002981738.1 CDS Rpic12D_1784 NC_012856.1 1906220 1906933 D TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM domain protein; KEGG: rso:RSp0965 ribonucleotide reductase activating transmembrane protein; anaerobic ribonucleoside-triphosphate reductase activating protein 1906220..1906933 Ralstonia pickettii 12D 8019440 YP_002981739.1 CDS Rpic12D_1785 NC_012856.1 1906938 1907615 D PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: rso:RS02297 transcription regulator protein; Crp/Fnr family transcriptional regulator 1906938..1907615 Ralstonia pickettii 12D 8019441 YP_002981740.1 CDS Rpic12D_1786 NC_012856.1 1907636 1908025 R PFAM: DGC domain protein; KEGG: rso:RS02298 lipoprotein; DGC domain-containing protein complement(1907636..1908025) Ralstonia pickettii 12D 8019442 YP_002981741.1 CDS Rpic12D_1787 NC_012856.1 1908039 1908464 R KEGG: rso:RS02299 hypothetical protein; hypothetical protein complement(1908039..1908464) Ralstonia pickettii 12D 8019443 YP_002981742.1 CDS Rpic12D_1788 NC_012856.1 1908461 1909345 R PFAM: peptidase U32; KEGG: rso:RS02300 hypothetical protein; peptidase U32 complement(1908461..1909345) Ralstonia pickettii 12D 8019444 YP_002981743.1 CDS Rpic12D_1789 NC_012856.1 1909356 1910372 R PFAM: peptidase U32; KEGG: rso:RS02301 protease protein; peptidase U32 complement(1909356..1910372) Ralstonia pickettii 12D 8019445 YP_002981744.1 CDS Rpic12D_1790 NC_012856.1 1910418 1911698 R KEGG: rso:RS02303 hypothetical protein; hypothetical protein complement(1910418..1911698) Ralstonia pickettii 12D 8019446 YP_002981745.1 CDS Rpic12D_1791 NC_012856.1 1911774 1914095 R PFAM: ATPase AAA; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: rso:RSc1961 ATPase protein; ATPase AAA complement(1911774..1914095) Ralstonia pickettii 12D 8019447 YP_002981746.1 CDS Rpic12D_1792 NC_012856.1 1914611 1915267 D TIGRFAM: TonB family protein; PFAM: Gram-negative tonB protein; KEGG: rso:RSc1963 TonB transmembrane protein; TonB family protein 1914611..1915267 Ralstonia pickettii 12D 8019448 YP_002981747.1 CDS Rpic12D_1793 NC_012856.1 1915317 1916045 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: rso:RSc1964 biopolymer transport transmembrane protein; MotA/TolQ/ExbB proton channel 1915317..1916045 Ralstonia pickettii 12D 8019449 YP_002981748.1 CDS Rpic12D_1794 NC_012856.1 1916055 1916465 D PFAM: Biopolymer transport protein ExbD/TolR; KEGG: rso:RSc1965 biopolymer transport transmembrane protein; biopolymer transport protein ExbD/TolR 1916055..1916465 Ralstonia pickettii 12D 8019450 YP_002981749.1 CDS Rpic12D_1795 NC_012856.1 1916709 1916990 D KEGG: rso:RSc1966 hemin uptake protein; hemin uptake protein 1916709..1916990 Ralstonia pickettii 12D 8019451 YP_002981750.1 CDS Rpic12D_1796 NC_012856.1 1917183 1917596 R PFAM: protein of unknown function DUF336; KEGG: rso:RSc1967 GlcG protein; hypothetical protein complement(1917183..1917596) Ralstonia pickettii 12D 8019452 YP_002981751.1 CDS Rpic12D_1797 NC_012856.1 1917906 1918157 R KEGG: reh:H16_A2537 hypothetical membrane associated protein; hypothetical protein complement(1917906..1918157) Ralstonia pickettii 12D 8019453 YP_002981752.1 CDS Rpic12D_1798 NC_012856.1 1918172 1918315 R hypothetical protein complement(1918172..1918315) Ralstonia pickettii 12D 8019454 YP_002981753.1 CDS Rpic12D_1799 NC_012856.1 1918406 1918732 R KEGG: rso:RSc1969 hypothetical protein; hypothetical protein complement(1918406..1918732) Ralstonia pickettii 12D 8019455 YP_002981754.1 CDS Rpic12D_1800 NC_012856.1 1918883 1919122 R KEGG: rso:RSc1970 hypothetical protein; hypothetical protein complement(1918883..1919122) Ralstonia pickettii 12D 8019456 YP_002981755.1 CDS Rpic12D_1801 NC_012856.1 1919385 1919894 R TIGRFAM: phasin family protein; KEGG: rso:RSc1972 phasin protein; phasin family protein complement(1919385..1919894) Ralstonia pickettii 12D 8019457 YP_002981756.1 CDS Rpic12D_1802 NC_012856.1 1920085 1920495 D PFAM: PRC-barrel domain protein; KEGG: dac:Daci_4398 PRC-barrel domain-containing protein; PRC-barrel domain-containing protein 1920085..1920495 Ralstonia pickettii 12D 8019458 YP_002981757.1 CDS Rpic12D_1803 NC_012856.1 1920635 1920835 D KEGG: rso:RSc1973 osmotically inducible lipoprotein B1 transmembrane; osmotically inducible lipoprotein B1 transmembrane 1920635..1920835 Ralstonia pickettii 12D 8019459 YP_002981758.1 CDS Rpic12D_1804 NC_012856.1 1920988 1921950 D involved in the export of lipooligosaccharides during nodulation; nodulation ABC transporter NodI 1920988..1921950 Ralstonia pickettii 12D 8019460 YP_002981759.1 CDS Rpic12D_1805 NC_012856.1 1921962 1922783 D TIGRFAM: ABC transporter, NodJ family; PFAM: ABC transporter; KEGG: rso:RSc1975 transmembrane permease ABC transporter protein; NodJ family ABC-2 type transporter 1921962..1922783 Ralstonia pickettii 12D 8019461 YP_002981760.1 CDS Rpic12D_1806 NC_012856.1 1922853 1924388 R Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase complement(1922853..1924388) Ralstonia pickettii 12D 8019462 YP_002981761.1 CDS Rpic12D_1807 NC_012856.1 1924486 1924983 R PFAM: Colicin V production protein; KEGG: rso:RSc1977 colicin V production transmembrane protein; colicin V production protein complement(1924486..1924983) Ralstonia pickettii 12D 8019463 YP_002981762.1 CDS Rpic12D_1808 NC_012856.1 1925074 1925940 R PFAM: sporulation protein; KEGG: rso:RSc1978 hypothetical protein; sporulation domain-containing protein complement(1925074..1925940) Ralstonia pickettii 12D 8019464 YP_002981763.1 CDS Rpic12D_1809 NC_012856.1 1925955 1927253 R TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: rso:RSc1979 bifunctional folylpolyglutamate synthase/dihydrofolate synthase; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase complement(1925955..1927253) Ralstonia pickettii 12D 8019465 YP_002981764.1 CDS Rpic12D_1810 NC_012856.1 1927347 1928219 R catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta complement(1927347..1928219) Ralstonia pickettii 12D 8019466 YP_002981765.1 CDS trpA NC_012856.1 1928250 1929047 R catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha complement(1928250..1929047) Ralstonia pickettii 12D 8019467 YP_002981766.1 CDS Rpic12D_1812 NC_012856.1 1929062 1929883 R PFAM: DNA methylase N-4/N-6 domain protein; KEGG: rso:RSc1982 DNA-methyltransferase (DNA-modification methylase) protein; DNA methylase N-4/N-6 domain-containing protein complement(1929062..1929883) Ralstonia pickettii 12D 8019468 YP_002981767.1 CDS Rpic12D_1813 NC_012856.1 1929900 1931093 R catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta complement(1929900..1931093) Ralstonia pickettii 12D 8019469 YP_002981768.1 CDS Rpic12D_1814 NC_012856.1 1931190 1931891 R catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase complement(1931190..1931891) Ralstonia pickettii 12D 8019470 YP_002981769.1 CDS truA NC_012856.1 1931906 1932730 R mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A complement(1931906..1932730) Ralstonia pickettii 12D 8019471 YP_002981770.1 CDS Rpic12D_1816 NC_012856.1 1932814 1935723 R KEGG: rso:RSc1986 hypothetical protein; hypothetical protein complement(1932814..1935723) Ralstonia pickettii 12D 8019472 YP_002981771.1 CDS Rpic12D_1817 NC_012856.1 1936110 1937213 R catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase complement(1936110..1937213) Ralstonia pickettii 12D 8019473 YP_002981772.1 CDS Rpic12D_1818 NC_012856.1 1937296 1937442 R hypothetical protein complement(1937296..1937442) Ralstonia pickettii 12D 8019474 YP_002981773.1 CDS Rpic12D_1819 NC_012856.1 1937552 1938622 R catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase complement(1937552..1938622) Ralstonia pickettii 12D 8019475 YP_002981774.1 CDS leuD NC_012856.1 1938652 1939302 R catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit complement(1938652..1939302) Ralstonia pickettii 12D 8019476 YP_002981775.1 CDS Rpic12D_1821 NC_012856.1 1939326 1940735 R dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit complement(1939326..1940735) Ralstonia pickettii 12D 8019477 YP_002981776.1 CDS gltA NC_012856.1 1940958 1942259 R type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase complement(1940958..1942259) Ralstonia pickettii 12D 8019478 YP_002981777.1 CDS Rpic12D_1823 NC_012856.1 1942381 1942668 R PFAM: protein of unknown function DUF339; KEGG: rso:RSc1992 hypothetical protein; hypothetical protein complement(1942381..1942668) Ralstonia pickettii 12D 8019479 YP_002981778.1 CDS sdhB NC_012856.1 1942740 1943441 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit complement(1942740..1943441) Ralstonia pickettii 12D 8019480 YP_002981779.1 CDS sdhA NC_012856.1 1943464 1945242 R part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit complement(1943464..1945242) Ralstonia pickettii 12D 8019481 YP_002981780.1 CDS Rpic12D_1826 NC_012856.1 1945246 1945611 R TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; KEGG: rso:RSc1995 transmembrane succinate dehydrogenase (hydrophobic membrane anchor subunit) oxidoreductase protein; succinate dehydrogenase, hydrophobic membrane anchor protein complement(1945246..1945611) Ralstonia pickettii 12D 8019482 YP_002981781.1 CDS Rpic12D_1827 NC_012856.1 1945622 1946032 R TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: rso:RSc1996 transmembrane succinate dehydrogenase (cytochrome b-556 subunit) oxidoreductase protein; succinate dehydrogenase, cytochrome b556 subunit complement(1945622..1946032) Ralstonia pickettii 12D 8019483 YP_002981782.1 CDS Rpic12D_1828 NC_012856.1 1946306 1947082 R PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: rso:RSc1997 transcription regulator protein; GntR family transcriptional regulator complement(1946306..1947082) Ralstonia pickettii 12D 8019484 YP_002981783.1 CDS Rpic12D_1829 NC_012856.1 1947468 1948454 D catalyzes the oxidation of malate to oxaloacetate; malate dehydrogenase 1947468..1948454 Ralstonia pickettii 12D 8019485 YP_002981784.1 CDS Rpic12D_1830 NC_012856.1 1948573 1949553 D PFAM: HpcH/HpaI aldolase; KEGG: rso:RSc1999 lyase protein; HpcH/HpaI aldolase 1948573..1949553 Ralstonia pickettii 12D 8019486 YP_002981785.1 CDS prpB NC_012856.1 1949577 1950473 D catalyzes the formation of pyruvate and succinate from 2-methylisocitrate; 2-methylisocitrate lyase 1949577..1950473 Ralstonia pickettii 12D 8019487 YP_002981786.1 CDS Rpic12D_1832 NC_012856.1 1950753 1951295 D KEGG: rso:RSc2001 signal peptide protein; signal peptide protein 1950753..1951295 Ralstonia pickettii 12D 8019488 YP_002981787.1 CDS acnA NC_012856.1 1951807 1954512 D catalyzes the conversion of citrate to isocitrate; aconitate hydratase 1951807..1954512 Ralstonia pickettii 12D 8019490 YP_002981788.1 CDS Rpic12D_1835 NC_012856.1 1954724 1955011 D KEGG: rso:RSc2004 signal peptide protein; signal peptide protein 1954724..1955011 Ralstonia pickettii 12D 8019491 YP_002981789.1 CDS Rpic12D_1836 NC_012856.1 1955109 1956320 D KEGG: rso:RSc2005 hypothetical protein; hypothetical protein 1955109..1956320 Ralstonia pickettii 12D 8019492 YP_002981790.1 CDS Rpic12D_1837 NC_012856.1 1956482 1958080 D PFAM: extracellular solute-binding protein family 5; KEGG: rso:RSc2006 transport binding transmembrane protein; family 5 extracellular solute-binding protein 1956482..1958080 Ralstonia pickettii 12D 8019493 YP_002981791.1 CDS Rpic12D_1838 NC_012856.1 1958237 1959073 D KEGG: rso:RSc2007 lipoprotein transmembrane; lipoprotein transmembrane 1958237..1959073 Ralstonia pickettii 12D 8019494 YP_002981792.1 CDS Rpic12D_1839 NC_012856.1 1959114 1960259 R PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; KEGG: rso:RSc2008 hypothetical protein; peptidase M14 carboxypeptidase A complement(1959114..1960259) Ralstonia pickettii 12D 8019495 YP_002981793.1 CDS Rpic12D_1840 NC_012856.1 1960274 1961047 R PFAM: protein of unknown function DUF328; KEGG: rso:RSc2009 hypothetical protein; hypothetical protein complement(1960274..1961047) Ralstonia pickettii 12D 8019496 YP_002981794.1 CDS Rpic12D_1841 NC_012856.1 1961085 1961609 D SMART: nucleotide binding protein PINc; KEGG: rso:RSc2010 hypothetical protein; nucleotide binding protein PINc 1961085..1961609 Ralstonia pickettii 12D 8019497 YP_002981795.1 CDS Rpic12D_1842 NC_012856.1 1961622 1962794 D catalyzes the transfer of an amino moiety; aminotransferase 1961622..1962794 Ralstonia pickettii 12D 8019498 YP_002981796.1 CDS Rpic12D_1843 NC_012856.1 1962815 1963468 R PFAM: Glutathione S-transferase domain; KEGG: rso:RSc2012 gst-related protein; glutathione S-transferase complement(1962815..1963468) Ralstonia pickettii 12D 8019499 YP_002981797.1 CDS Rpic12D_1844 NC_012856.1 1963578 1965086 D converts 3-hydroxyadipyl-CoA to beta-ketoadipyl-CoA in phenylacetate degradation; 3-hydroxyacyl-CoA dehydrogenase 1963578..1965086 Ralstonia pickettii 12D 8019500 YP_002981798.1 CDS Rpic12D_1845 NC_012856.1 1965113 1965892 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1965113..1965892 Ralstonia pickettii 12D 8019501 YP_002981799.1 CDS Rpic12D_1846 NC_012856.1 1965905 1966639 D PFAM: phosphoglycerate mutase; KEGG: rso:RSc2015 phosphoglycerate mutase protein; phosphoglycerate mutase 1965905..1966639 Ralstonia pickettii 12D 8019502 YP_002981800.1 CDS Rpic12D_1847 NC_012856.1 1966687 1967775 D PFAM: aminoglycoside phosphotransferase; KEGG: rso:RSc2016 hypothetical protein; aminoglycoside phosphotransferase 1966687..1967775 Ralstonia pickettii 12D 8019503 YP_002981801.1 CDS Rpic12D_1848 NC_012856.1 1967789 1968190 R KEGG: rso:RSc2017 hypothetical protein; hypothetical protein complement(1967789..1968190) Ralstonia pickettii 12D 8019504 YP_002981802.1 CDS Rpic12D_1849 NC_012856.1 1968187 1968900 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cvi:CV_2810 oxidoreductase; short-chain dehydrogenase/reductase SDR complement(1968187..1968900) Ralstonia pickettii 12D 8019505 YP_002981803.1 CDS Rpic12D_1850 NC_012856.1 1969025 1970020 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sbm:Shew185_0453 LysR family transcriptional regulator; LysR family transcriptional regulator 1969025..1970020 Ralstonia pickettii 12D 8019506 YP_002981804.1 CDS Rpic12D_1851 NC_012856.1 1970027 1971055 R PFAM: Mg2 transporter protein CorA family protein; KEGG: bmj:BMULJ_00330 MIT family metal ion transporter; Mg2 transporter protein CorA family protein complement(1970027..1971055) Ralstonia pickettii 12D 8019507 YP_002981805.1 CDS Rpic12D_1852 NC_012856.1 1971196 1972140 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RSc2018 transcription regulator protein; LysR family transcriptional regulator complement(1971196..1972140) Ralstonia pickettii 12D 8019508 YP_002981806.1 CDS Rpic12D_1853 NC_012856.1 1972234 1972671 D PFAM: thioesterase superfamily protein; KEGG: rso:RSc2019 signal peptide protein; thioesterase superfamily protein 1972234..1972671 Ralstonia pickettii 12D 8019509 YP_002981807.1 CDS Rpic12D_1854 NC_012856.1 1972752 1974011 D PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rso:RSc2020 acyl-CoA dehydrogenase oxidoreductase protein; acyl-CoA dehydrogenase domain-containing protein 1972752..1974011 Ralstonia pickettii 12D 8019510 YP_002981808.1 CDS Rpic12D_1855 NC_012856.1 1974182 1974874 D PFAM: Glutathione S-transferase domain; KEGG: rso:RSc2021 GST-related protein; glutathione S-transferase 1974182..1974874 Ralstonia pickettii 12D 8019511 YP_002981809.1 CDS Rpic12D_1856 NC_012856.1 1975003 1975662 D PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: rso:RSc2022 hypothetical protein; isoprenylcysteine carboxyl methyltransferase 1975003..1975662 Ralstonia pickettii 12D 8019512 YP_002981810.1 CDS Rpic12D_1857 NC_012856.1 1975735 1976064 R hypothetical protein complement(1975735..1976064) Ralstonia pickettii 12D 8019513 YP_002981811.1 CDS Rpic12D_1858 NC_012856.1 1976131 1976757 R TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: rso:RSc2029 urease accessory protein; urease accessory protein UreG complement(1976131..1976757) Ralstonia pickettii 12D 8019514 YP_002981812.1 CDS Rpic12D_1859 NC_012856.1 1976769 1977458 R PFAM: urease accessory protein UreF; KEGG: rso:RSc2030 urease accessory protein UreF; urease accessory protein UreF complement(1976769..1977458) Ralstonia pickettii 12D 8019515 YP_002981813.1 CDS ureE NC_012856.1 1977451 1978095 R involved in the assembly of the urease metallocenter; possible nickel donor; urease accessory protein UreE complement(1977451..1978095) Ralstonia pickettii 12D 8019516 YP_002981814.1 CDS ureC NC_012856.1 1978762 1980480 R ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; urease subunit alpha complement(1978762..1980480) Ralstonia pickettii 12D 8019517 YP_002981815.1 CDS Rpic12D_1862 NC_012856.1 1980503 1980808 R KEGG: rso:RSc2033 urease subunit beta protein; TIGRFAM: urease, beta subunit; PFAM: urease beta subunit; urease subunit beta complement(1980503..1980808) Ralstonia pickettii 12D 8019518 YP_002981816.1 CDS Rpic12D_1863 NC_012856.1 1980822 1981439 R PFAM: HupE/UreJ protein; KEGG: rso:RSc2034 urease accessory UreJ transmembrane protein; HupE/UreJ protein complement(1980822..1981439) Ralstonia pickettii 12D 8019519 YP_002981817.1 CDS ureA NC_012856.1 1981488 1981790 R UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; urease subunit gamma complement(1981488..1981790) Ralstonia pickettii 12D 8019520 YP_002981818.1 CDS Rpic12D_1865 NC_012856.1 1981881 1982768 R PFAM: urease accessory protein UreD; KEGG: rso:RSc2036 urease accessory protein UreD; urease accessory protein UreD complement(1981881..1982768) Ralstonia pickettii 12D 8019521 YP_002981819.1 CDS Rpic12D_1866 NC_012856.1 1982871 1983563 R KEGG: rso:RSc2037 ABC transporter ATP-binding protein; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter; SMART: AAA ATPase; urea ABC transporter ATP-binding protein UrtE complement(1982871..1983563) Ralstonia pickettii 12D 8019522 YP_002981820.1 CDS Rpic12D_1867 NC_012856.1 1983565 1984416 R TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter; KEGG: rso:RSc2038 ABC transporter ATP-binding protein; urea ABC transporter ATP-binding protein UrtD complement(1983565..1984416) Ralstonia pickettii 12D 8019523 YP_002981821.1 CDS Rpic12D_1868 NC_012856.1 1984413 1985582 R TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: rso:RSc2039 ABC transporter permease; urea ABC transporter permease protein UrtC complement(1984413..1985582) Ralstonia pickettii 12D 8019524 YP_002981822.1 CDS Rpic12D_1869 NC_012856.1 1985584 1987215 R TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; KEGG: rso:RSc2040 ABC transporter permease; urea ABC transporter permease protein UrtB complement(1985584..1987215) Ralstonia pickettii 12D 8019525 YP_002981823.1 CDS Rpic12D_1870 NC_012856.1 1987316 1988572 R TIGRFAM: urea ABC transporter, urea binding protein; PFAM: extracellular ligand-binding receptor; KEGG: rso:RSc2041 UreA/short-chain amide-binding signal peptide protein; urea ABC transporter urea binding protein complement(1987316..1988572) Ralstonia pickettii 12D 8019526 YP_002981824.1 CDS Rpic12D_1871 NC_012856.1 1988837 1989316 R PFAM: MaoC domain protein dehydratase; KEGG: rso:RSc2042 hypothetical protein; MaoC domain-containing protein dehydratase complement(1988837..1989316) Ralstonia pickettii 12D 8019527 YP_002981825.1 CDS Rpic12D_1872 NC_012856.1 1989354 1989839 R PFAM: MaoC domain protein dehydratase; KEGG: rso:RSc2043 hypothetical protein; MaoC domain-containing protein dehydratase complement(1989354..1989839) Ralstonia pickettii 12D 8019528 YP_002981826.1 CDS Rpic12D_1873 NC_012856.1 1989896 1991026 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rso:RSc2044 acyl-CoA dehydrogenase oxidoreductase protein; acyl-CoA dehydrogenase domain-containing protein complement(1989896..1991026) Ralstonia pickettii 12D 8019529 YP_002981827.1 CDS Rpic12D_1874 NC_012856.1 1991062 1992258 R PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rso:RSc2045 acyl-CoA dehydrogenase oxidoreductase protein; acyl-CoA dehydrogenase domain-containing protein complement(1991062..1992258) Ralstonia pickettii 12D 8019530 YP_002981828.1 CDS Rpic12D_1875 NC_012856.1 1992343 1992804 R PFAM: protein of unknown function DUF1178; KEGG: rso:RSc2046 hypothetical protein; hypothetical protein complement(1992343..1992804) Ralstonia pickettii 12D 8019531 YP_002981829.1 CDS Rpic12D_1876 NC_012856.1 1992942 1993553 R PFAM: NUDIX hydrolase; KEGG: rso:RSc2047 hypothetical protein; NUDIX hydrolase complement(1992942..1993553) Ralstonia pickettii 12D 8019532 YP_002981830.1 CDS Rpic12D_1877 NC_012856.1 1993598 1993912 R KEGG: rso:RSc2048 hypothetical protein; hypothetical protein complement(1993598..1993912) Ralstonia pickettii 12D 8019533 YP_002981831.1 CDS Rpic12D_1878 NC_012856.1 1993926 1995401 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N complement(1993926..1995401) Ralstonia pickettii 12D 8019534 YP_002981832.1 CDS Rpic12D_1879 NC_012856.1 1995418 1996884 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M complement(1995418..1996884) Ralstonia pickettii 12D 8019535 YP_002981833.1 CDS Rpic12D_1880 NC_012856.1 1996897 1998957 R Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L complement(1996897..1998957) Ralstonia pickettii 12D 8019536 YP_002981834.1 CDS Rpic12D_1881 NC_012856.1 1998988 1999299 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K complement(1998988..1999299) Ralstonia pickettii 12D 8019537 YP_002981835.1 CDS Rpic12D_1882 NC_012856.1 1999317 1999949 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J complement(1999317..1999949) Ralstonia pickettii 12D 8019538 YP_002981836.1 CDS Rpic12D_1883 NC_012856.1 2000096 2000587 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I complement(2000096..2000587) Ralstonia pickettii 12D 8019539 YP_002981837.1 CDS Rpic12D_1884 NC_012856.1 2000608 2001672 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H complement(2000608..2001672) Ralstonia pickettii 12D 8019540 YP_002981838.1 CDS Rpic12D_1885 NC_012856.1 2001681 2004032 R Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit G complement(2001681..2004032) Ralstonia pickettii 12D 8019541 YP_002981839.1 CDS Rpic12D_1886 NC_012856.1 2004045 2005340 R KEGG: rso:RSc2057 NADH dehydrogenase I chain F; TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH-quinone oxidoreductase subunit F complement(2004045..2005340) Ralstonia pickettii 12D 8019542 YP_002981840.1 CDS Rpic12D_1887 NC_012856.1 2005341 2005844 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E complement(2005341..2005844) Ralstonia pickettii 12D 8019543 YP_002981841.1 CDS Rpic12D_1888 NC_012856.1 2005960 2007213 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D complement(2005960..2007213) Ralstonia pickettii 12D 8019544 YP_002981842.1 CDS Rpic12D_1889 NC_012856.1 2007227 2007829 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit C complement(2007227..2007829) Ralstonia pickettii 12D 8019545 YP_002981843.1 CDS Rpic12D_1890 NC_012856.1 2007831 2008313 R The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B complement(2007831..2008313) Ralstonia pickettii 12D 8019546 YP_002981844.1 CDS Rpic12D_1891 NC_012856.1 2008320 2008679 R Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A complement(2008320..2008679) Ralstonia pickettii 12D 8019547 YP_002981845.1 CDS secG NC_012856.1 2009107 2009469 R TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: rso:RSc2063 preprotein translocase subunit SecG; preprotein translocase subunit SecG complement(2009107..2009469) Ralstonia pickettii 12D 8019549 YP_002981846.1 CDS tpiA NC_012856.1 2009532 2010278 R Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase complement(2009532..2010278) Ralstonia pickettii 12D 8019550 YP_002981847.1 CDS Rpic12D_1894 NC_012856.1 2010358 2011362 R TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: rso:RSc2065 NADPH quinone oxidoreductase oxidoreductase protein; NAD(P)H quinone oxidoreductase complement(2010358..2011362) Ralstonia pickettii 12D 8019551 YP_002981848.1 CDS Rpic12D_1895 NC_012856.1 2011401 2012354 R KEGG: rso:RSc2066 hypothetical protein; hypothetical protein complement(2011401..2012354) Ralstonia pickettii 12D 8019552 YP_002981849.1 CDS Rpic12D_1896 NC_012856.1 2012457 2014631 R KEGG: rso:RSc2067 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; Exoribonuclease, phosphorolytic domain 2; KH type 1 domain protein; SMART: RNA binding S1 domain protein; KH domain protein; polynucleotide phosphorylase/polyadenylase complement(2012457..2014631) Ralstonia pickettii 12D 8019553 YP_002981850.1 CDS rpsO NC_012856.1 2014950 2015219 R primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 complement(2014950..2015219) Ralstonia pickettii 12D 8019554 YP_002981851.1 CDS Rpic12D_1898 NC_012856.1 2015379 2016638 R KEGG: rso:RSc2070 transporter signal peptide protein; transporter signal peptide protein complement(2015379..2016638) Ralstonia pickettii 12D 8019555 YP_002981852.1 CDS Rpic12D_1899 NC_012856.1 2016661 2017266 D KEGG: rso:RSc2071 hypothetical protein; hypothetical protein 2016661..2017266 Ralstonia pickettii 12D 8019556 YP_002981853.1 CDS Rpic12D_1900 NC_012856.1 2017511 2019052 R catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase complement(2017511..2019052) Ralstonia pickettii 12D 8019557 YP_002981854.1 CDS Rpic12D_1901 NC_012856.1 2019368 2020240 R KEGG: rso:RSc2073 CDP-diacylglycerol--serine O-phosphatidyltransferase protein; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/serine O-phosphatidyltransferase complement(2019368..2020240) Ralstonia pickettii 12D 8019558 YP_002981855.1 CDS Rpic12D_1902 NC_012856.1 2020254 2020901 R catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase complement(2020254..2020901) Ralstonia pickettii 12D 8019559 YP_002981856.1 CDS Rpic12D_1903 NC_012856.1 2021047 2022063 R catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase complement(2021047..2022063) Ralstonia pickettii 12D 8019560 YP_002981857.1 CDS ilvH NC_012856.1 2022139 2022630 R with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit complement(2022139..2022630) Ralstonia pickettii 12D 8019561 YP_002981858.1 CDS Rpic12D_1905 NC_012856.1 2022630 2024387 R acetolactate synthase large subunit; catalyzes the formation of 2-acetolactate from pyruvate; acetolactate synthase 3 catalytic subunit complement(2022630..2024387) Ralstonia pickettii 12D 8019562 YP_002981859.1 CDS Rpic12D_1906 NC_012856.1 2024747 2025313 D DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; RNA polymerase factor sigma-70 2024747..2025313 Ralstonia pickettii 12D 8019563 YP_002981860.1 CDS Rpic12D_1907 NC_012856.1 2025310 2025750 D KEGG: rso:RSc2079 hypothetical protein; hypothetical protein 2025310..2025750 Ralstonia pickettii 12D 8019564 YP_002981861.1 CDS Rpic12D_1908 NC_012856.1 2025762 2026610 D KEGG: rso:RSc2080 hypothetical protein; hypothetical protein 2025762..2026610 Ralstonia pickettii 12D 8019565 YP_002981862.1 CDS Rpic12D_1909 NC_012856.1 2026789 2027229 D PFAM: RDD domain containing protein; KEGG: rso:RSc2081 hypothetical protein; RDD domain-containing protein 2026789..2027229 Ralstonia pickettii 12D 8019566 YP_002981863.1 CDS Rpic12D_1910 NC_012856.1 2027260 2028276 D PFAM: PGAP1 family protein; KEGG: rso:RSc2082 lipase transmembrane protein; PGAP1 family protein 2027260..2028276 Ralstonia pickettii 12D 8019567 YP_002981864.1 CDS Rpic12D_1911 NC_012856.1 2028520 2029470 D PFAM: metallophosphoesterase; KEGG: rso:RSc2083 hypothetical protein; metallophosphoesterase 2028520..2029470 Ralstonia pickettii 12D 8019568 YP_002981865.1 CDS Rpic12D_1912 NC_012856.1 2029548 2030600 D PFAM: glycosyl transferase group 1; KEGG: rso:RSc2084 hypothetical protein; group1 glycosyl transferase 2029548..2030600 Ralstonia pickettii 12D 8019569 YP_002981866.1 CDS Rpic12D_1913 NC_012856.1 2030613 2031077 D PFAM: diacylglycerol kinase; KEGG: rso:RSc2085 diacylglycerol kinase transmembrane protein; diacylglycerol kinase 2030613..2031077 Ralstonia pickettii 12D 8019570 YP_002981867.1 CDS Rpic12D_1914 NC_012856.1 2031216 2031935 D PFAM: regulatory protein TetR; KEGG: rso:RSc2086 transcription regulator protein; TetR family transcriptional regulator 2031216..2031935 Ralstonia pickettii 12D 8019571 YP_002981868.1 CDS Rpic12D_1915 NC_012856.1 2031932 2032516 D PFAM: conserved hypothetical protein; KEGG: rso:RSc2087 hypothetical protein; hypothetical protein 2031932..2032516 Ralstonia pickettii 12D 8019572 YP_002981869.1 CDS Rpic12D_1916 NC_012856.1 2032530 2033108 R PFAM: protein of unknown function DUF924; KEGG: rso:RSc2089 transmembrane protein; hypothetical protein complement(2032530..2033108) Ralstonia pickettii 12D 8019573 YP_002981870.1 CDS Rpic12D_1917 NC_012856.1 2033158 2033562 R PFAM: globin; KEGG: rso:RSc2090 oxygen-binding protein (globin); globin complement(2033158..2033562) Ralstonia pickettii 12D 8019574 YP_002981871.1 CDS Rpic12D_1918 NC_012856.1 2033596 2036130 R PFAM: protein of unknown function DUF214; KEGG: rso:RSc2091 hypothetical protein; hypothetical protein complement(2033596..2036130) Ralstonia pickettii 12D 8019575 YP_002981872.1 CDS Rpic12D_1919 NC_012856.1 2036187 2037287 R PFAM: regulatory protein LysR; KEGG: rso:RSc2092 hypothetical protein; LysR family transcriptional regulator complement(2036187..2037287) Ralstonia pickettii 12D 8019576 YP_002981873.1 CDS Rpic12D_1920 NC_012856.1 2037446 2038294 D PFAM: extracellular solute-binding protein family 1; KEGG: rso:RSc2093 signal peptide protein; family 1 extracellular solute-binding protein 2037446..2038294 Ralstonia pickettii 12D 8019577 YP_002981874.1 CDS Rpic12D_1921 NC_012856.1 2038339 2039286 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RSc2094 transcription regulator protein; LysR family transcriptional regulator complement(2038339..2039286) Ralstonia pickettii 12D 8019578 YP_002981875.1 CDS Rpic12D_1922 NC_012856.1 2039500 2041014 D TIGRFAM: xanthine dehydrogenase, small subunit; PFAM: molybdopterin dehydrogenase FAD-binding; [2Fe-2S]-binding domain protein; CO dehydrogenase flavoprotein domain protein; ferredoxin; KEGG: rso:RSc2095 xanthine dehydrogenase (subunit A) oxidoreductase protein; xanthine dehydrogenase small subunit 2039500..2041014 Ralstonia pickettii 12D 8019579 YP_002981876.1 CDS Rpic12D_1923 NC_012856.1 2041019 2043385 D KEGG: rso:RSc2096 xanthine dehydrogenase subunit B; TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; xanthine dehydrogenase, molybdopterin binding subunit 2041019..2043385 Ralstonia pickettii 12D 8019580 YP_002981877.1 CDS Rpic12D_1924 NC_012856.1 2043402 2044436 D TIGRFAM: xanthine dehydrogenase accessory protein XdhC; PFAM: protein of unknown function DUF182; KEGG: rso:RSc2097 xanthine dehydrogenase protein; xanthine dehydrogenase accessory protein XdhC 2043402..2044436 Ralstonia pickettii 12D 8019581 YP_002981878.1 CDS Rpic12D_1925 NC_012856.1 2044439 2045476 D catalyzes the formation of inosine from adenosine; adenosine deaminase 2044439..2045476 Ralstonia pickettii 12D 8019582 YP_002981879.1 CDS Rpic12D_1926 NC_012856.1 2045492 2046826 D Catalyzes the deamination of guanine; guanine deaminase 2045492..2046826 Ralstonia pickettii 12D 8019583 YP_002981880.1 CDS Rpic12D_1927 NC_012856.1 2047064 2047636 D PFAM: protein of unknown function UPF0016; KEGG: rso:RSc2100 hypothetical protein; hypothetical protein 2047064..2047636 Ralstonia pickettii 12D 8019584 YP_002981881.1 CDS Rpic12D_1928 NC_012856.1 2047680 2049275 R KEGG: reh:H16_A0659 hypothetical protein; hypothetical protein complement(2047680..2049275) Ralstonia pickettii 12D 8019585 YP_002981882.1 CDS Rpic12D_1929 NC_012856.1 2049286 2051610 R KEGG: cti:RALTA_A0612 conserved hypothetical protein; type V secretory pathway, adhesin AidA; ribonucleases G and E; ribonuclease G and E complement(2049286..2051610) Ralstonia pickettii 12D 8019586 YP_002981883.1 CDS Rpic12D_1930 NC_012856.1 2051641 2054229 R TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: reh:H16_A0656 hypothetical protein; ImpA family type VI secretion-associated protein complement(2051641..2054229) Ralstonia pickettii 12D 8019587 YP_002981884.1 CDS Rpic12D_1931 NC_012856.1 2054370 2054612 R hypothetical protein complement(2054370..2054612) Ralstonia pickettii 12D 8019588 YP_002981885.1 CDS Rpic12D_1932 NC_012856.1 2055164 2056441 R PFAM: protein of unknown function DUF989; KEGG: rso:RSc2115 hypothetical protein; hypothetical protein complement(2055164..2056441) Ralstonia pickettii 12D 8019589 YP_002981886.1 CDS Rpic12D_1933 NC_012856.1 2056459 2056812 R TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin; KEGG: rso:RSc2116 transthyretin-like protein precursor; hydroxyisourate hydrolase complement(2056459..2056812) Ralstonia pickettii 12D 8019590 YP_002981887.1 CDS Rpic12D_1934 NC_012856.1 2057190 2057948 D PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: rso:RSc2117 transcription regulator protein; GntR family transcriptional regulator 2057190..2057948 Ralstonia pickettii 12D 8019591 YP_002981888.1 CDS Rpic12D_1935 NC_012856.1 2058164 2059573 D TIGRFAM: xanthine permease; uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: rso:RSc2118 xanthine permease transmembrane protein; xanthine permease 2058164..2059573 Ralstonia pickettii 12D 8019592 YP_002981889.1 CDS Rpic12D_1936 NC_012856.1 2059578 2060996 D catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway.; hydroxydechloroatrazine ethylaminohydrolase 2059578..2060996 Ralstonia pickettii 12D 8019593 YP_002981890.1 CDS Rpic12D_1937 NC_012856.1 2061108 2062070 D KEGG: rso:RSc2120 hypothetical protein; TIGRFAM: urate catabolism protein; PFAM: polysaccharide deacetylase; urate catabolism protein 2061108..2062070 Ralstonia pickettii 12D 8019594 YP_002981891.1 CDS Rpic12D_1938 NC_012856.1 2062067 2062591 D TIGRFAM: OHCU decarboxylase; KEGG: rso:RSc2121 hypothetical protein; OHCU decarboxylase 2062067..2062591 Ralstonia pickettii 12D 8019595 YP_002981892.1 CDS Rpic12D_1939 NC_012856.1 2062743 2063813 D PFAM: porin Gram-negative type; KEGG: rso:RS00714 porin precursor transmembrane protein; porin 2062743..2063813 Ralstonia pickettii 12D 8019596 YP_002981893.1 CDS Rpic12D_1940 NC_012856.1 2063912 2066233 R NAD-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; does not decarboxylate oxaloacetate; malic enzyme complement(2063912..2066233) Ralstonia pickettii 12D 8019597 YP_002981894.1 CDS Rpic12D_1941 NC_012856.1 2066529 2067197 R KEGG: rso:RSc2124 lipoprotein transmembrane; lipoprotein transmembrane complement(2066529..2067197) Ralstonia pickettii 12D 8019598 YP_002981895.1 CDS pepN NC_012856.1 2067351 2070053 D TIGRFAM: aminopeptidase N; PFAM: peptidase M1 membrane alanine aminopeptidase; KEGG: rso:RSc2125 aminopeptidase N; aminopeptidase N 2067351..2070053 Ralstonia pickettii 12D 8019599 YP_002981896.1 CDS Rpic12D_1943 NC_012856.1 2070100 2071116 D catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 2070100..2071116 Ralstonia pickettii 12D 8019600 YP_002981897.1 CDS Rpic12D_1944 NC_012856.1 2071337 2071822 R PFAM: peptidoglycan-binding LysM; transport-associated; SMART: peptidoglycan-binding LysM; KEGG: rso:RSc2148 hypothetical protein; LysM domain/BON superfamily protein complement(2071337..2071822) Ralstonia pickettii 12D 8019602 YP_002981898.1 CDS Rpic12D_1945 NC_012856.1 2072123 2073157 D TIGRFAM: esterase, PHB depolymerase family; KEGG: rso:RSc2149 hypothetical protein; esterase, PHB depolymerase family 2072123..2073157 Ralstonia pickettii 12D 8019603 YP_002981899.1 CDS Rpic12D_1946 NC_012856.1 2073165 2073470 R KEGG: rso:RSc2150 hypothetical protein; hypothetical protein complement(2073165..2073470) Ralstonia pickettii 12D 8019604 YP_002981900.1 CDS Rpic12D_1947 NC_012856.1 2073576 2074013 R KEGG: rso:RSc2151 signal peptide protein; signal peptide protein complement(2073576..2074013) Ralstonia pickettii 12D 8019605 YP_002981901.1 CDS Rpic12D_1948 NC_012856.1 2074088 2075023 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mrd:Mrad2831_4415 LysR family transcriptional regulator; LysR family transcriptional regulator complement(2074088..2075023) Ralstonia pickettii 12D 8019606 YP_002981902.1 CDS Rpic12D_1949 NC_012856.1 2075172 2076005 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: mms:mma_0404 transporter of the DMT superfamily; hypothetical protein 2075172..2076005 Ralstonia pickettii 12D 8019607 YP_002981903.1 CDS greB NC_012856.1 2076015 2076578 R necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreB complement(2076015..2076578) Ralstonia pickettii 12D 8019608 YP_002981904.1 CDS Rpic12D_1951 NC_012856.1 2076991 2077389 D KEGG: pol:Bpro_1225 ISPsy11, transposase OrfA; ISPsy11, transposase OrfA 2076991..2077389 Ralstonia pickettii 12D 8019610 YP_002981905.1 CDS Rpic12D_1953 NC_012856.1 2078256 2080538 R KEGG: rso:RSc2153 bifunctional (P)ppGpp synthetase II/guanosine-3',5'-bisdiphosphate 3'-pyrophosphohydrolase; TIGRFAM: RelA/SpoT family protein; PFAM: RelA/SpoT domain protein; TGS domain protein; amino acid-binding ACT domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; (p)ppGpp synthetase I SpoT/RelA complement(2078256..2080538) Ralstonia pickettii 12D 8019612 YP_002981906.1 CDS Rpic12D_1954 NC_012856.1 2080675 2080893 D hypothetical protein 2080675..2080893 Ralstonia pickettii 12D 8019613 YP_002981907.1 CDS Rpic12D_1955 NC_012856.1 2080941 2081144 R Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega complement(2080941..2081144) Ralstonia pickettii 12D 8019614 YP_002981908.1 CDS gmk NC_012856.1 2081281 2081946 R Essential for recycling GMP and indirectly, cGMP; guanylate kinase complement(2081281..2081946) Ralstonia pickettii 12D 8019615 YP_002981909.1 CDS Rpic12D_1957 NC_012856.1 2081969 2082904 R PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: rso:RSc2156 hypothetical protein; hypothetical protein complement(2081969..2082904) Ralstonia pickettii 12D 8019616 YP_002981910.1 CDS Rpic12D_1958 NC_012856.1 2083055 2084080 D PFAM: serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: rso:RSc2157 protein kinase; serine/threonine protein kinase 2083055..2084080 Ralstonia pickettii 12D 8019617 YP_002981911.1 CDS Rpic12D_1959 NC_012856.1 2084186 2085100 D PFAM: protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: rso:RSc2158 hypothetical protein; protein serine/threonine phosphatase 2084186..2085100 Ralstonia pickettii 12D 8019618 YP_002981912.1 CDS rph NC_012856.1 2085195 2085911 D RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 2085195..2085911 Ralstonia pickettii 12D 8019619 YP_002981913.1 CDS Rpic12D_1961 NC_012856.1 2085923 2086528 D HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase 2085923..2086528 Ralstonia pickettii 12D 8019620 YP_002981914.1 CDS Rpic12D_1962 NC_012856.1 2086536 2087804 D catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 2086536..2087804 Ralstonia pickettii 12D 8019621 YP_002981915.1 CDS Rpic12D_1963 NC_012856.1 2088029 2088478 R hypothetical protein complement(2088029..2088478) Ralstonia pickettii 12D 8019623 YP_002981916.1 CDS Rpic12D_1964 NC_012856.1 2089136 2089720 D KEGG: reh:H16_B0962 ligand binding (PAS) regulator with LuxR-type HTH-motif; TIGRFAM: PAS sensor protein; PFAM: PAS fold domain protein; PAS fold-3 domain protein; regulatory protein LuxR; PAS fold-4 domain protein; SMART: PAS domain containing protein; regulatory protein LuxR; LuxR family transcriptional regulator 2089136..2089720 Ralstonia pickettii 12D 8019624 YP_002981917.1 CDS Rpic12D_1965 NC_012856.1 2090129 2090536 D hypothetical protein 2090129..2090536 Ralstonia pickettii 12D 8019625 YP_002981918.1 CDS Rpic12D_1966 NC_012856.1 2090572 2091204 D KEGG: rso:RSc2164 signal peptide protein; signal peptide protein 2090572..2091204 Ralstonia pickettii 12D 8019626 YP_002981919.1 CDS Rpic12D_1967 NC_012856.1 2091591 2092127 D KEGG: rde:RD1_2267 ribonuclease E; ribonuclease E 2091591..2092127 Ralstonia pickettii 12D 8019627 YP_002981920.1 CDS Rpic12D_1968 NC_012856.1 2092153 2092800 R catalyzes the removal of 5-oxoproline from various penultimate amino acid residues except L-proline; pyrrolidone-carboxylate peptidase complement(2092153..2092800) Ralstonia pickettii 12D 8019628 YP_002981921.1 CDS Rpic12D_1969 NC_012856.1 2092879 2093874 R PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: rso:RSc2166 signal peptide protein; TRAP dicarboxylate transporter subunit DctP complement(2092879..2093874) Ralstonia pickettii 12D 8019629 YP_002981922.1 CDS Rpic12D_1970 NC_012856.1 2094046 2095002 R PFAM: protein of unknown function DUF979; KEGG: rso:RSc2167 hypothetical protein; hypothetical protein complement(2094046..2095002) Ralstonia pickettii 12D 8019630 YP_002981923.1 CDS Rpic12D_1971 NC_012856.1 2095006 2095731 R PFAM: protein of unknown function DUF969; KEGG: rso:RSc2168 hypothetical protein; hypothetical protein complement(2095006..2095731) Ralstonia pickettii 12D 8019631 YP_002981924.1 CDS Rpic12D_1972 NC_012856.1 2095787 2096557 R PFAM: LamB/YcsF family protein; KEGG: rso:RSc2169 hypothetical protein; LamB/YcsF family protein complement(2095787..2096557) Ralstonia pickettii 12D 8019632 YP_002981925.1 CDS Rpic12D_1973 NC_012856.1 2096550 2097596 R KEGG: rso:RSc2170 hypothetical protein; TIGRFAM: urea amidolyase related protein; PFAM: allophanate hydrolase subunit 2; SMART: allophanate hydrolase subunit 2; urea amidolyase-like protein complement(2096550..2097596) Ralstonia pickettii 12D 8019633 YP_002981926.1 CDS Rpic12D_1974 NC_012856.1 2097593 2098240 R PFAM: allophanate hydrolase subunit 1; SMART: allophanate hydrolase subunit 1; KEGG: rso:RSc2171 hypothetical protein; allophanate hydrolase subunit 1 complement(2097593..2098240) Ralstonia pickettii 12D 8019634 YP_002981927.1 CDS Rpic12D_1975 NC_012856.1 2098516 2099700 R TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc2172 drug transport transmembrane protein; Bcr/CflA subfamily drug resistance transporter complement(2098516..2099700) Ralstonia pickettii 12D 8019635 YP_002981928.1 CDS Rpic12D_1976 NC_012856.1 2100178 2101728 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RSc2173 sugar ATP binding ABC transporter protein; ABC transporter 2100178..2101728 Ralstonia pickettii 12D 8019636 YP_002981929.1 CDS Rpic12D_1977 NC_012856.1 2101721 2102830 D PFAM: inner-membrane translocator; KEGG: rso:RSc2174 transmembrane ABC transporter protein; inner-membrane translocator 2101721..2102830 Ralstonia pickettii 12D 8019637 YP_002981930.1 CDS Rpic12D_1978 NC_012856.1 2102844 2103764 D PFAM: inner-membrane translocator; KEGG: rso:RSc2175 transmembrane ABC transporter protein; inner-membrane translocator 2102844..2103764 Ralstonia pickettii 12D 8019638 YP_002981931.1 CDS Rpic12D_1979 NC_012856.1 2103844 2105001 D PFAM: basic membrane lipoprotein; KEGG: rso:RSc2177 lipoprotein; basic membrane lipoprotein 2103844..2105001 Ralstonia pickettii 12D 8019639 YP_002981932.1 CDS Rpic12D_1980 NC_012856.1 2105166 2105462 D PFAM: protein of unknown function DUF1232; KEGG: rso:RSc2183 hypothetical protein; hypothetical protein 2105166..2105462 Ralstonia pickettii 12D 8019640 YP_002981933.1 CDS Rpic12D_1981 NC_012856.1 2105472 2106452 R PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: rso:RSc2184 NADPH:quinone reductase, zeta-crystallin homolog oxidoreductase protein; alcohol dehydrogenase zinc-binding domain-containing protein complement(2105472..2106452) Ralstonia pickettii 12D 8019641 YP_002981934.1 CDS mgsA NC_012856.1 2106449 2106880 R catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase complement(2106449..2106880) Ralstonia pickettii 12D 8019642 YP_002981935.1 CDS Rpic12D_1983 NC_012856.1 2106891 2107682 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rso:RSc2186 dehydrogenase/reductase oxidoreductase protein; short-chain dehydrogenase/reductase SDR complement(2106891..2107682) Ralstonia pickettii 12D 8019643 YP_002981936.1 CDS Rpic12D_1984 NC_012856.1 2107733 2108650 R PFAM: protein of unknown function DUF6 transmembrane; protein of unknown function DUF250; KEGG: rso:RSc2187 hypothetical protein; hypothetical protein complement(2107733..2108650) Ralstonia pickettii 12D 8019644 YP_002981937.1 CDS Rpic12D_1985 NC_012856.1 2108761 2110314 D TIGRFAM: NCS1 nucleoside transporter family; PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: amc:MADE_00768 cytosine/purines, uracil, thiamine, allantoin transporter; NCS1 nucleoside transporter family 2108761..2110314 Ralstonia pickettii 12D 8019645 YP_002981938.1 CDS upp NC_012856.1 2110381 2111031 D Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 2110381..2111031 Ralstonia pickettii 12D 8019646 YP_002981939.1 CDS Rpic12D_1987 NC_012856.1 2111101 2112663 R PFAM: protein of unknown function DUF853 NPT hydrolase KEGG: rso:RSc2189 hypothetical protein; hypothetical protein complement(2111101..2112663) Ralstonia pickettii 12D 8019647 YP_002981940.1 CDS Rpic12D_1988 NC_012856.1 2112837 2113562 D PFAM: protein of unknown function DUF28; KEGG: rso:RSc2190 hypothetical protein; hypothetical protein 2112837..2113562 Ralstonia pickettii 12D 8019648 YP_002981941.1 CDS Rpic12D_1989 NC_012856.1 2113658 2114926 D catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 2113658..2114926 Ralstonia pickettii 12D 8019649 YP_002981942.1 CDS Rpic12D_1990 NC_012856.1 2115081 2115989 D catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 2115081..2115989 Ralstonia pickettii 12D 8019650 YP_002981943.1 CDS Rpic12D_1991 NC_012856.1 2115986 2116696 D catalyzes the formation of deamido-NAD(+) from nicotinate ribonucleotide and ATP; nicotinic acid mononucleotide adenylyltransferase 2115986..2116696 Ralstonia pickettii 12D 8019651 YP_002981944.1 CDS Rpic12D_1992 NC_012856.1 2116768 2117409 D TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: rso:RSc2194 hypothetical protein; iojap family protein 2116768..2117409 Ralstonia pickettii 12D 8019652 YP_002981945.1 CDS Rpic12D_1993 NC_012856.1 2117431 2117901 D SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 2117431..2117901 Ralstonia pickettii 12D 8019653 YP_002981946.1 CDS Rpic12D_1994 NC_012856.1 2117898 2118521 D Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 2117898..2118521 Ralstonia pickettii 12D 8019654 YP_002981947.1 CDS Rpic12D_1995 NC_012856.1 2118663 2120132 D KEGG: rso:RSc2197 ribonuclease G; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA binding S1 domain protein; SMART: RNA binding S1 domain protein; ribonuclease, Rne/Rng family 2118663..2120132 Ralstonia pickettii 12D 8019655 YP_002981948.1 CDS Rpic12D_1996 NC_012856.1 2120154 2121611 R PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: bcm:Bcenmc03_2604 major facilitator transporter; major facilitator superfamily protein complement(2120154..2121611) Ralstonia pickettii 12D 8019656 YP_002981949.1 CDS Rpic12D_1997 NC_012856.1 2121692 2122639 R KEGG: bte:BTH_I0707 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein; 2-dehydropantoate 2-reductase complement(2121692..2122639) Ralstonia pickettii 12D 8019657 YP_002981950.1 CDS Rpic12D_1998 NC_012856.1 2122646 2124130 R PFAM: aldehyde Dehydrogenase; KEGG: bte:BTH_I0706 aldehyde dehydrogenase family protein; aldehyde dehydrogenase complement(2122646..2124130) Ralstonia pickettii 12D 8019658 YP_002981951.1 CDS Rpic12D_1999 NC_012856.1 2124130 2125719 R catalyzes the formation of benzaldehyde from benzoylformate; benzoylformate decarboxylase complement(2124130..2125719) Ralstonia pickettii 12D 8019659 YP_002981952.1 CDS Rpic12D_2000 NC_012856.1 2125812 2126711 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bcj:BCAL2797 LysR family regulatory protein; LysR family transcriptional regulator 2125812..2126711 Ralstonia pickettii 12D 8019660 YP_002981953.1 CDS Rpic12D_2001 NC_012856.1 2126722 2127318 R TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase; KEGG: rso:RSc2199 hypothetical protein; peroxidase-like protein complement(2126722..2127318) Ralstonia pickettii 12D 8019661 YP_002981954.1 CDS Rpic12D_2002 NC_012856.1 2127370 2129094 R KEGG: rso:RSc2200 ABC transporter ATP-binding protein; TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter; ABC transporter transmembrane region; SMART: AAA ATPase; lipid ABC transporter ATPase/inner membrane protein complement(2127370..2129094) Ralstonia pickettii 12D 8019662 YP_002981955.1 CDS Rpic12D_2003 NC_012856.1 2129327 2130109 D PFAM: glycosyl transferase family 25; KEGG: cti:RALTA_A0814 glycosyl transferase; glycosyl transferase family protein 2129327..2130109 Ralstonia pickettii 12D 8019663 YP_002981956.1 CDS Rpic12D_2004 NC_012856.1 2130125 2130967 R PFAM: glycosyl transferase family 2; KEGG: pna:Pnap_2051 glycosyl transferase, family 2; family 2 glycosyl transferase complement(2130125..2130967) Ralstonia pickettii 12D 8019664 YP_002981957.1 CDS Rpic12D_2005 NC_012856.1 2130954 2131727 R PFAM: glycosyl transferase family 2; KEGG: pna:Pnap_2052 glycosyl transferase, family 2; family 2 glycosyl transferase complement(2130954..2131727) Ralstonia pickettii 12D 8019665 YP_002981958.1 CDS Rpic12D_2006 NC_012856.1 2131740 2133020 R PFAM: O-antigen polymerase; KEGG: cti:RALTA_A2359 lipopolysaccharide O-antigen ligase transmembrane protein; O-antigen polymerase complement(2131740..2133020) Ralstonia pickettii 12D 8019666 YP_002981959.1 CDS Rpic12D_2007 NC_012856.1 2133017 2134084 R PFAM: glycosyl transferase group 1; KEGG: bxe:Bxe_A3289 LPS biosynthesis-related protein; group1 glycosyl transferase complement(2133017..2134084) Ralstonia pickettii 12D 8019667 YP_002981960.1 CDS dnaE NC_012856.1 2134168 2137686 R catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha complement(2134168..2137686) Ralstonia pickettii 12D 8019668 YP_002981961.1 CDS Rpic12D_2009 NC_012856.1 2137822 2138685 D PFAM: rhodanese; SMART: rhodanese; KEGG: rso:RSc2206 hypothetical protein; rhodanese superfamily protein 2137822..2138685 Ralstonia pickettii 12D 8019669 YP_002981962.1 CDS Rpic12D_2010 NC_012856.1 2138682 2138807 D hypothetical protein 2138682..2138807 Ralstonia pickettii 12D 8019670 YP_002981963.1 CDS Rpic12D_2011 NC_012856.1 2138870 2139442 R PFAM: flavodoxin/nitric oxide synthase; KEGG: rso:RSc2207 TRP repressor binding protein; flavodoxin/nitric oxide synthase complement(2138870..2139442) Ralstonia pickettii 12D 8019671 YP_002981964.1 CDS Rpic12D_2012 NC_012856.1 2139522 2140220 R PFAM: pirin; KEGG: rso:RSc2208 pirin-like protein; Pirin domain-containing protein complement(2139522..2140220) Ralstonia pickettii 12D 8019672 YP_002981965.1 CDS Rpic12D_2013 NC_012856.1 2140327 2141229 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RSc2209 transcriptional regulator transcription regulator protein; LysR family transcriptional regulator 2140327..2141229 Ralstonia pickettii 12D 8019673 YP_002981966.1 CDS Rpic12D_2014 NC_012856.1 2141292 2142227 D this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu; glutamyl-Q tRNA(Asp) synthetase 2141292..2142227 Ralstonia pickettii 12D 8019674 YP_002981967.1 CDS Rpic12D_2015 NC_012856.1 2142275 2143756 R PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicases ; helicase domain protein; KEGG: rso:RSc2211 ATP-dependent RNA helicase protein; DEAD/DEAH box helicase complement(2142275..2143756) Ralstonia pickettii 12D 8019675 YP_002981968.1 CDS Rpic12D_2016 NC_012856.1 2144011 2144826 D PFAM: beta-lactamase domain protein; KEGG: rso:RSc2212 hypothetical protein; beta-lactamase domain-containing protein 2144011..2144826 Ralstonia pickettii 12D 8019676 YP_002981969.1 CDS Rpic12D_2017 NC_012856.1 2144810 2145520 R PFAM: regulatory protein TetR; KEGG: rso:RSc2213 transcription regulator transcription regulator protein; TetR family transcriptional regulator complement(2144810..2145520) Ralstonia pickettii 12D 8019677 YP_002981970.1 CDS Rpic12D_2018 NC_012856.1 2145722 2146024 D hypothetical protein 2145722..2146024 Ralstonia pickettii 12D 8019678 YP_002981971.1 CDS Rpic12D_2019 NC_012856.1 2146038 2149349 D PFAM: carbamoyl-phosphate synthase L chain ATP-binding; biotin carboxylase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; carboxyl transferase; biotin/lipoyl attachment domain-containing protein; carbamoyl-phosphate synthetase large chain domain protein; KEGG: reh:H16_A3290 biotin carboxylase; carbamoyl-phosphate synthase L chain ATP-binding 2146038..2149349 Ralstonia pickettii 12D 8019679 YP_002981972.1 CDS Rpic12D_2021 NC_012856.1 2149653 2150657 R PFAM: beta-lactamase domain protein; KEGG: rso:RSc2214 hypothetical protein; beta-lactamase domain-containing protein complement(2149653..2150657) Ralstonia pickettii 12D 8019681 YP_002981973.1 CDS Rpic12D_2022 NC_012856.1 2150868 2151359 R KEGG: bch:Bcen2424_5102 hypothetical protein; hypothetical protein complement(2150868..2151359) Ralstonia pickettii 12D 8019682 YP_002981974.1 CDS Rpic12D_2023 NC_012856.1 2151472 2152296 R PFAM: OmpW family protein; KEGG: bmv:BMASAVP1_A0901 OmpW family outer membrane protein; OmpW family protein complement(2151472..2152296) Ralstonia pickettii 12D 8019683 YP_002981975.1 CDS Rpic12D_2024 NC_012856.1 2152371 2153630 R KEGG: bpd:BURPS668_3132 lipoprotein; lipoprotein complement(2152371..2153630) Ralstonia pickettii 12D 8019684 YP_002981976.1 CDS Rpic12D_2025 NC_012856.1 2153722 2155317 R KEGG: bur:Bcep18194_B0544 hypothetical protein; hypothetical protein complement(2153722..2155317) Ralstonia pickettii 12D 8019685 YP_002981977.1 CDS Rpic12D_2026 NC_012856.1 2155548 2155661 D hypothetical protein 2155548..2155661 Ralstonia pickettii 12D 8019686 YP_002981978.1 CDS Rpic12D_2027 NC_012856.1 2156253 2158718 R sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD complement(2156253..2158718) Ralstonia pickettii 12D 8019688 YP_002981979.1 CDS dnaG NC_012856.1 2159056 2160867 R synthesizes RNA primers at the replication forks; DNA primase complement(2159056..2160867) Ralstonia pickettii 12D 8019689 YP_002981980.1 CDS Rpic12D_2029 NC_012856.1 2160905 2161363 R KEGG: rso:RSc2217 hypothetical protein; hypothetical protein complement(2160905..2161363) Ralstonia pickettii 12D 8019690 YP_002981981.1 CDS Rpic12D_2030 NC_012856.1 2161485 2162708 R PFAM: HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rso:RSc2218 transmembrane protein; hypothetical protein complement(2161485..2162708) Ralstonia pickettii 12D 8019691 YP_002981982.1 CDS Rpic12D_2031 NC_012856.1 2162804 2163847 D in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 2162804..2163847 Ralstonia pickettii 12D 8019692 YP_002981983.1 CDS Rpic12D_2032 NC_012856.1 2163894 2164700 R similar protein in Methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis; GTP cyclohydrolase complement(2163894..2164700) Ralstonia pickettii 12D 8019693 YP_002981984.1 CDS Rpic12D_2033 NC_012856.1 2164950 2166860 R catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase complement(2164950..2166860) Ralstonia pickettii 12D 8019694 YP_002981985.1 CDS Rpic12D_2034 NC_012856.1 2166917 2167828 R PFAM: Polyprenyl synthetase; KEGG: rso:RSc2222 geranyltranstransferase; polyprenyl synthetase complement(2166917..2167828) Ralstonia pickettii 12D 8019695 YP_002981986.1 CDS Rpic12D_2035 NC_012856.1 2167825 2168112 R catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit complement(2167825..2168112) Ralstonia pickettii 12D 8019696 YP_002981987.1 CDS Rpic12D_2036 NC_012856.1 2168527 2169624 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: rso:RSc2224 dioxygenase alpha subunit; Rieske (2Fe-2S) domain-containing protein 2168527..2169624 Ralstonia pickettii 12D 8019697 YP_002981988.1 CDS Rpic12D_2037 NC_012856.1 2169721 2170710 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RSc2225 hypothetical protein; hypothetical protein 2169721..2170710 Ralstonia pickettii 12D 8019698 YP_002981989.1 CDS Rpic12D_2038 NC_012856.1 2170732 2171619 D PFAM: rhodanese; SMART: rhodanese; KEGG: rso:RSc2226 thiosulfate sulfurtransferase protein; rhodanese domain-containing protein 2170732..2171619 Ralstonia pickettii 12D 8019699 YP_002981990.1 CDS Rpic12D_2039 NC_012856.1 2171690 2172496 R PFAM: zinc/iron permease; KEGG: rso:RSc2227 hypothetical protein; zinc/iron permease complement(2171690..2172496) Ralstonia pickettii 12D 8019700 YP_002981991.1 CDS Rpic12D_2040 NC_012856.1 2172647 2173525 R PFAM: dienelactone hydrolase; KEGG: rso:RSc2228 carboxymethylenebutenolidase (dienelactone hydrolase) protein; carboxymethylenebutenolidase complement(2172647..2173525) Ralstonia pickettii 12D 8019701 YP_002981992.1 CDS Rpic12D_2041 NC_012856.1 2173634 2174968 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: rso:RSc2229 NADH dehydrogenase, membrane flavoprotein FAD NAD ubiquinone electron transport oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(2173634..2174968) Ralstonia pickettii 12D 8019702 YP_002981993.1 CDS Rpic12D_2042 NC_012856.1 2175176 2177989 R has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I complement(2175176..2177989) Ralstonia pickettii 12D 8019703 YP_002981994.1 CDS Rpic12D_2043 NC_012856.1 2177994 2178947 D PFAM: conserved hypothetical protein; KEGG: rso:RSc2231 hypothetical protein; hypothetical protein 2177994..2178947 Ralstonia pickettii 12D 8019704 YP_002981995.1 CDS Rpic12D_2044 NC_012856.1 2179042 2179476 D KEGG: rso:RSc2232 transmembrane protein; hypothetical protein 2179042..2179476 Ralstonia pickettii 12D 8019705 YP_002981996.1 CDS Rpic12D_2045 NC_012856.1 2179562 2180566 D catalyzes the formation of O-phospho-L-homoserine from L-homoserine; homoserine kinase 2179562..2180566 Ralstonia pickettii 12D 8019706 YP_002981997.1 CDS Rpic12D_2046 NC_012856.1 2180557 2181354 D KEGG: rso:RSc2234 hypothetical protein; hypothetical protein 2180557..2181354 Ralstonia pickettii 12D 8019707 YP_002981998.1 CDS Rpic12D_2047 NC_012856.1 2181379 2183739 R PFAM: UvrD/REP helicase; KEGG: rso:RSc2235 DNA helicase II protein; UvrD/REP helicase complement(2181379..2183739) Ralstonia pickettii 12D 8019708 YP_002981999.1 CDS valS NC_012856.1 2183892 2186768 D valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 2183892..2186768 Ralstonia pickettii 12D 8019709 YP_002982000.1 CDS Rpic12D_2049 NC_012856.1 2186802 2187674 D TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: rso:RSc2237 UTP--glucose-1-phosphate uridylyltransferase protein; UTP-glucose-1-phosphate uridylyltransferase 2186802..2187674 Ralstonia pickettii 12D 8019710 YP_002982001.1 CDS Rpic12D_2050 NC_012856.1 2187807 2188763 R KEGG: rso:RSc2238 hypothetical protein; hypothetical protein complement(2187807..2188763) Ralstonia pickettii 12D 8019711 YP_002982002.1 CDS Rpic12D_2051 NC_012856.1 2189275 2189493 R stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 complement(2189275..2189493) Ralstonia pickettii 12D 8019712 YP_002982003.1 CDS Rpic12D_2052 NC_012856.1 2189841 2190134 R KEGG: rso:RSc2240 hypothetical protein; hypothetical protein complement(2189841..2190134) Ralstonia pickettii 12D 8019713 YP_002982004.1 CDS Rpic12D_2053 NC_012856.1 2190439 2191545 D PFAM: TM1410 hypothetical-related protein; KEGG: rso:RSc2241 hypothetical protein; hypothetical protein 2190439..2191545 Ralstonia pickettii 12D 8019714 YP_002982005.1 CDS Rpic12D_2054 NC_012856.1 2191523 2192749 R catalyzes the formation of protocatechuate from 4-hydroxybenzoate; 4-hydroxybenzoate 3-monooxygenase complement(2191523..2192749) Ralstonia pickettii 12D 8019715 YP_002982006.1 CDS Rpic12D_2055 NC_012856.1 2192870 2193847 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc2243 transcription regulator protein; LysR family transcriptional regulator 2192870..2193847 Ralstonia pickettii 12D 8019716 YP_002982007.1 CDS Rpic12D_2056 NC_012856.1 2193985 2195151 D PFAM: extracellular ligand-binding receptor; KEGG: rso:RSc2244 substrate-binding periplasmic ABC transporter protein; extracellular ligand-binding receptor 2193985..2195151 Ralstonia pickettii 12D 8019717 YP_002982008.1 CDS Rpic12D_2057 NC_012856.1 2195155 2195856 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RSc2245 ABC transporter ATP-binding protein; ABC transporter complement(2195155..2195856) Ralstonia pickettii 12D 8019718 YP_002982009.1 CDS Rpic12D_2058 NC_012856.1 2195849 2196622 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RSc2246 ABC transporter ATP-binding protein; ABC transporter complement(2195849..2196622) Ralstonia pickettii 12D 8019719 YP_002982010.1 CDS Rpic12D_2059 NC_012856.1 2196619 2197653 R PFAM: inner-membrane translocator; KEGG: rso:RSc2247 transmembrane ABC transporter protein; inner-membrane translocator complement(2196619..2197653) Ralstonia pickettii 12D 8019720 YP_002982011.1 CDS Rpic12D_2060 NC_012856.1 2197650 2198519 R PFAM: inner-membrane translocator; KEGG: rso:RSc2248 transmembrane ABC transporter protein; inner-membrane translocator complement(2197650..2198519) Ralstonia pickettii 12D 8019721 YP_002982012.1 CDS Rpic12D_2061 NC_012856.1 2198602 2199000 R KEGG: rso:RSc2249 4-carboxymuconolactone decarboxylase protein; TIGRFAM: 4-carboxymuconolactone decarboxylase; PFAM: carboxymuconolactone decarboxylase; 4-carboxymuconolactone decarboxylase complement(2198602..2199000) Ralstonia pickettii 12D 8019722 YP_002982013.1 CDS Rpic12D_2062 NC_012856.1 2198993 2199805 R TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; KEGG: rso:RSc2250 B-ketoadipate enol-lactone hydrolase transmembrane protein; 3-oxoadipate enol-lactonase complement(2198993..2199805) Ralstonia pickettii 12D 8019723 YP_002982014.1 CDS Rpic12D_2063 NC_012856.1 2199828 2201189 R Catalyzes the cycloisomerization of cis,cis-muconate; 3-carboxy-cis,cis-muconate cycloisomerase complement(2199828..2201189) Ralstonia pickettii 12D 8019724 YP_002982015.1 CDS Rpic12D_2064 NC_012856.1 2201203 2202405 R catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; beta-ketoadipyl CoA thiolase complement(2201203..2202405) Ralstonia pickettii 12D 8019725 YP_002982016.1 CDS Rpic12D_2065 NC_012856.1 2202428 2203090 R KEGG: rso:RSc2253 3-oxoadipate CoA-transferase subunit B protein; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B complement(2202428..2203090) Ralstonia pickettii 12D 8019726 YP_002982017.1 CDS Rpic12D_2066 NC_012856.1 2203087 2203782 R KEGG: rso:RSc2254 3-oxoadipate CoA-transferase subunit A protein; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit A complement(2203087..2203782) Ralstonia pickettii 12D 8019727 YP_002982018.1 CDS Rpic12D_2067 NC_012856.1 2204056 2204892 D KEGG: rso:RSc2255 transcription regulator protein; TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; IclR family transcriptional regulator 2204056..2204892 Ralstonia pickettii 12D 8019728 YP_002982019.1 CDS Rpic12D_2068 NC_012856.1 2204982 2205560 D KEGG: rso:RSc2256 signal peptide protein; signal peptide protein 2204982..2205560 Ralstonia pickettii 12D 8019729 YP_002982020.1 CDS Rpic12D_2069 NC_012856.1 2205915 2206760 D PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: rso:RSc2257 amino-acid-binding periplasmic ABC transporter protein; family 3 extracellular solute-binding protein 2205915..2206760 Ralstonia pickettii 12D 8019730 YP_002982021.1 CDS Rpic12D_2070 NC_012856.1 2206821 2207516 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc2258 amino acid ABC transporter transmembrane protein; polar amino acid ABC transporter permease 2206821..2207516 Ralstonia pickettii 12D 8019731 YP_002982022.1 CDS Rpic12D_2071 NC_012856.1 2207519 2208211 D TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc2259 amino acid ABC transporter transmembrane protein; polar amino acid ABC transporter permease 2207519..2208211 Ralstonia pickettii 12D 8019732 YP_002982023.1 CDS Rpic12D_2072 NC_012856.1 2208208 2208957 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RSc2260 amino-acid ATP-binding ABC transporter protein; ABC transporter 2208208..2208957 Ralstonia pickettii 12D 8019733 YP_002982024.1 CDS Rpic12D_2073 NC_012856.1 2209030 2209953 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: rso:RSc2261 amino-acid-binding periplasmic (PBP) ABC transporter protein; family 3 extracellular solute-binding protein complement(2209030..2209953) Ralstonia pickettii 12D 8019734 YP_002982025.1 CDS Rpic12D_2074 NC_012856.1 2210084 2211352 R catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit complement(2210084..2211352) Ralstonia pickettii 12D 8019735 YP_002982026.1 CDS Rpic12D_2075 NC_012856.1 2211864 2213234 R KEGG: rso:RSc2270 hypothetical protein; hypothetical protein complement(2211864..2213234) Ralstonia pickettii 12D 8019736 YP_002982027.1 CDS Rpic12D_2076 NC_012856.1 2213234 2214856 R PFAM: glycosyl transferase group 1; KEGG: rso:RSc2271 hypothetical protein; group1 glycosyl transferase complement(2213234..2214856) Ralstonia pickettii 12D 8019737 YP_002982028.1 CDS Rpic12D_2077 NC_012856.1 2214853 2215839 R KEGG: rso:RSc2272 hypothetical protein; hypothetical protein complement(2214853..2215839) Ralstonia pickettii 12D 8019738 YP_002982029.1 CDS Rpic12D_2079 NC_012856.1 2217328 2217888 R KEGG: rso:RSc2274 lipoprotein; lipoprotein complement(2217328..2217888) Ralstonia pickettii 12D 8019740 YP_002982030.1 CDS Rpic12D_2080 NC_012856.1 2217958 2221989 R PFAM: Tetratricopeptide TPR_4; KEGG: rso:RSc2275 signal peptide protein; hypothetical protein complement(2217958..2221989) Ralstonia pickettii 12D 8019741 YP_002982031.1 CDS Rpic12D_2082 NC_012856.1 2225300 2226616 D PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: rso:RSc2277 hypothetical protein; hypothetical protein 2225300..2226616 Ralstonia pickettii 12D 8019743 YP_002982032.1 CDS Rpic12D_2083 NC_012856.1 2226556 2226927 R PFAM: carboxymuconolactone decarboxylase; KEGG: kpe:KPK_5444 carboxymuconolactone decarboxylase family protein; carboxymuconolactone decarboxylase complement(2226556..2226927) Ralstonia pickettii 12D 8019744 YP_002982033.1 CDS Rpic12D_2084 NC_012856.1 2226929 2227504 R PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: rfr:Rfer_4023 MerR family transcriptional regulator; MerR family transcriptional regulator complement(2226929..2227504) Ralstonia pickettii 12D 8019745 YP_002982034.1 CDS Rpic12D_2085 NC_012856.1 2227643 2227870 R KEGG: rso:RSc2279 signal peptide protein; signal peptide protein complement(2227643..2227870) Ralstonia pickettii 12D 8019746 YP_002982035.1 CDS Rpic12D_2086 NC_012856.1 2228284 2228556 D KEGG: rso:RSc2280 signal peptide protein; signal peptide protein 2228284..2228556 Ralstonia pickettii 12D 8019747 YP_002982036.1 CDS Rpic12D_2087 NC_012856.1 2228620 2230353 R PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: fal:FRAAL4174 signal peptide; type I phosphodiesterase/nucleotide pyrophosphatase complement(2228620..2230353) Ralstonia pickettii 12D 8019748 YP_002982037.1 CDS Rpic12D_2088 NC_012856.1 2230576 2231397 D PFAM: MltA-interacting MipA family protein; KEGG: rso:RSc2284 transmembrane protein; MltA-interacting MipA family protein 2230576..2231397 Ralstonia pickettii 12D 8019749 YP_002982038.1 CDS Rpic12D_2089 NC_012856.1 2231698 2232165 D KEGG: bxe:Bxe_B1529 hypothetical protein; hypothetical protein 2231698..2232165 Ralstonia pickettii 12D 8019750 YP_002982039.1 CDS Rpic12D_2090 NC_012856.1 2232252 2233133 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: reh:H16_B1057 ABC-type transporter, periplasmic component; family 3 extracellular solute-binding protein complement(2232252..2233133) Ralstonia pickettii 12D 8019751 YP_002982040.1 CDS Rpic12D_2091 NC_012856.1 2233229 2233756 R KEGG: cti:RALTA_B0676 cytochrome C550 protein; ethanol oxydation system; cytochrome C550 protein; ethanol oxydation system complement(2233229..2233756) Ralstonia pickettii 12D 8019752 YP_002982041.1 CDS Rpic12D_2092 NC_012856.1 2233981 2236011 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; GAF domain protein; SMART: AAA ATPase; KEGG: rme:Rmet_5127 sigma54 specific transcriptional regulator with GAF sensor, fis family; GAF modulated sigma54 specific transcriptional regulator 2233981..2236011 Ralstonia pickettii 12D 8019753 YP_002982042.1 CDS Rpic12D_2093 NC_012856.1 2235997 2236941 R PFAM: alpha/beta hydrolase fold; KEGG: reh:H16_B1053 prolyl aminopeptidase; prolyl aminopeptidase complement(2235997..2236941) Ralstonia pickettii 12D 8019754 YP_002982043.1 CDS pqqA NC_012856.1 2237045 2237119 D Required for coenzyme pyrroloquinoline quinone (PQQ) biosynthesis; probably provides the glutamate and tyrosine residues that are cross-linked and modified to form the coenzyme; coenzyme PQQ synthesis protein PqqA 2237045..2237119 Ralstonia pickettii 12D 8019755 YP_002982044.1 CDS Rpic12D_2095 NC_012856.1 2237263 2238180 D possibly involved in transport of pyrroloquinoline quinone transport; pyrroloquinoline quinone biosynthesis protein PqqB 2237263..2238180 Ralstonia pickettii 12D 8019756 YP_002982045.1 CDS Rpic12D_2096 NC_012856.1 2238177 2238887 D Required in the synthesis of PPQ, but its exact function is unknown; pyrroloquinoline quinone biosynthesis protein PqqC 2238177..2238887 Ralstonia pickettii 12D 8019757 YP_002982046.1 CDS Rpic12D_2097 NC_012856.1 2238868 2239140 D PFAM: coenzyme PQQ synthesis D; KEGG: reh:H16_B1050 pyrroloquinoline quinone (coenzyme PQQ) biosynthesis protein D; coenzyme PQQ synthesis D 2238868..2239140 Ralstonia pickettii 12D 8019758 YP_002982047.1 CDS Rpic12D_2098 NC_012856.1 2239112 2240314 D TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM domain protein; KEGG: cti:RALTA_B0668 quinoprotein ethanol dehydrogenase; PQQ dehydrogenase family; pyrroloquinoline quinone biosynthesis protein PqqE 2239112..2240314 Ralstonia pickettii 12D 8019759 YP_002982048.1 CDS Rpic12D_2099 NC_012856.1 2240385 2240717 R PFAM: cytochrome C class I; KEGG: reh:H16_B1048 cytochrome C551/c552; class I cytochrome c complement(2240385..2240717) Ralstonia pickettii 12D 8019760 YP_002982049.1 CDS Rpic12D_2100 NC_012856.1 2240789 2242543 R KEGG: reh:H16_B1047 quinate dehydrogenase (PQQ); TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone; PQQ-dependent dehydrogenase complement(2240789..2242543) Ralstonia pickettii 12D 8019761 YP_002982050.1 CDS Rpic12D_2101 NC_012856.1 2242759 2243334 R PFAM: cytochrome B561; KEGG: bxe:Bxe_B2465 cytochrome b561; cytochrome B561 complement(2242759..2243334) Ralstonia pickettii 12D 8019762 YP_002982051.1 CDS Rpic12D_2102 NC_012856.1 2243321 2244394 R TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: reu:Reut_B5421 WD-40 repeat-containing protein; 40-residue YVTN family beta-propeller repeat-containing protein complement(2243321..2244394) Ralstonia pickettii 12D 8019763 YP_002982052.1 CDS Rpic12D_2103 NC_012856.1 2244415 2247036 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bvi:Bcep1808_6560 TonB-dependent receptor; TonB-dependent receptor complement(2244415..2247036) Ralstonia pickettii 12D 8019764 YP_002982053.1 CDS Rpic12D_2104 NC_012856.1 2247290 2248810 R PFAM: aldehyde Dehydrogenase; KEGG: rme:Rmet_5128 aldehyde dehydrogenase; aldehyde dehydrogenase complement(2247290..2248810) Ralstonia pickettii 12D 8019765 YP_002982054.1 CDS Rpic12D_2105 NC_012856.1 2248964 2249872 D KEGG: reh:H16_B1045 hypothetical membrane associated protein; hypothetical protein 2248964..2249872 Ralstonia pickettii 12D 8019766 YP_002982055.1 CDS Rpic12D_2106 NC_012856.1 2249869 2250816 D PFAM: beta-lactamase domain protein; KEGG: cti:RALTA_B0665 metal dependent hydrolase; beta-lactamase domain-containing protein 2249869..2250816 Ralstonia pickettii 12D 8019767 YP_002982056.1 CDS Rpic12D_2107 NC_012856.1 2250857 2251786 D PFAM: beta-lactamase domain protein; KEGG: cti:RALTA_B0674 conserved hypothetical protein; metal dependent hydrolase; beta-lactamase domain-containing protein 2250857..2251786 Ralstonia pickettii 12D 8019768 YP_002982057.1 CDS Rpic12D_2108 NC_012856.1 2252048 2253178 D KEGG: mpt:Mpe_A1592 outer membrane protein (porin); putative outer membrane protein 2252048..2253178 Ralstonia pickettii 12D 8019769 YP_002982058.1 CDS Rpic12D_2109 NC_012856.1 2253368 2254279 D PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: rso:RS02093 hypothetical protein; acyltransferase 2253368..2254279 Ralstonia pickettii 12D 8019770 YP_002982059.1 CDS Rpic12D_2110 NC_012856.1 2254605 2254940 D KEGG: bcj:BCAL2491 hypothetical protein; hypothetical protein 2254605..2254940 Ralstonia pickettii 12D 8019771 YP_002982060.1 CDS Rpic12D_2111 NC_012856.1 2255027 2255800 D PFAM: protein of unknown function DUF347; KEGG: rme:Rmet_4981 protein of unknown function DUF347; hypothetical protein 2255027..2255800 Ralstonia pickettii 12D 8019772 YP_002982061.1 CDS Rpic12D_2112 NC_012856.1 2255826 2256278 D KEGG: bvi:Bcep1808_7222 signal peptide protein; signal peptide protein 2255826..2256278 Ralstonia pickettii 12D 8019773 YP_002982062.1 CDS Rpic12D_2113 NC_012856.1 2256295 2257053 D PFAM: protein of unknown function DUF347; KEGG: rme:Rmet_4979 protein of unknown function DUF347; hypothetical protein 2256295..2257053 Ralstonia pickettii 12D 8019774 YP_002982063.1 CDS Rpic12D_2114 NC_012856.1 2257077 2257196 D KEGG: rme:Rmet_4978 two component transcriptional regulator, winged helix family; hypothetical protein 2257077..2257196 Ralstonia pickettii 12D 8019775 YP_002982064.1 CDS Rpic12D_2116 NC_012856.1 2258062 2258835 R KEGG: aav:Aave_2651 hydroxyacylglutathione hydrolase; TIGRFAM: hydroxyacylglutathione hydrolase; PFAM: beta-lactamase domain protein; hydroxyacylglutathione hydrolase complement(2258062..2258835) Ralstonia pickettii 12D 8019777 YP_002982065.1 CDS Rpic12D_2118 NC_012856.1 2259332 2259727 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: azo:azo1226 lactoylglutathione lyase; glyoxalase/bleomycin resistance protein/dioxygenase complement(2259332..2259727) Ralstonia pickettii 12D 8019779 YP_002982066.1 CDS Rpic12D_2119 NC_012856.1 2259731 2260078 R involved in siderophore biosynthesis; KEGG: vei:Veis_2704 hypothetical protein; hypothetical protein complement(2259731..2260078) Ralstonia pickettii 12D 8019780 YP_002982067.1 CDS Rpic12D_2120 NC_012856.1 2260117 2261685 R PFAM: glucose-methanol-choline oxidoreductase; KEGG: mpt:Mpe_A0945 2-keto-gluconate dehydrogenase; gluconate 2-dehydrogenase complement(2260117..2261685) Ralstonia pickettii 12D 8019781 YP_002982068.1 CDS Rpic12D_2121 NC_012856.1 2261806 2262414 R KEGG: vei:Veis_2706 hypothetical protein; hypothetical protein complement(2261806..2262414) Ralstonia pickettii 12D 8019782 YP_002982069.1 CDS Rpic12D_2122 NC_012856.1 2262512 2262907 R PFAM: cytochrome C class I; KEGG: rme:Rmet_3424 cytochrome C, class I; class I cytochrome c complement(2262512..2262907) Ralstonia pickettii 12D 8019783 YP_002982070.1 CDS Rpic12D_2124 NC_012856.1 2264260 2265375 D KEGG: similar to C6orf205 protein; hypothetical protein 2264260..2265375 Ralstonia pickettii 12D 8019785 YP_002982071.1 CDS Rpic12D_2125 NC_012856.1 2266187 2267839 D PFAM: cytochrome C oxidase subunit I; KEGG: rso:RS02325 cytochrome C oxidase subunit transmembrane protein; cytochrome-c oxidase 2266187..2267839 Ralstonia pickettii 12D 8019786 YP_002982072.1 CDS Rpic12D_2126 NC_012856.1 2267836 2268459 D PFAM: cytochrome C oxidase mono-heme subunit/FixO; KEGG: rso:RS02324 signal peptide protein; cytochrome C oxidase mono-heme subunit/FixO 2267836..2268459 Ralstonia pickettii 12D 8019787 YP_002982073.1 CDS Rpic12D_2127 NC_012856.1 2268478 2269086 D PFAM: cytochrome C class I; KEGG: rso:RS02321 hypothetical protein; class I cytochrome c 2268478..2269086 Ralstonia pickettii 12D 8019788 YP_002982074.1 CDS Rpic12D_2128 NC_012856.1 2269355 2270038 D KEGG: rso:RS02320 hypothetical protein; hypothetical protein 2269355..2270038 Ralstonia pickettii 12D 8019789 YP_002982075.1 CDS Rpic12D_2129 NC_012856.1 2270035 2270679 D KEGG: rso:RS02319 hypothetical protein; hypothetical protein 2270035..2270679 Ralstonia pickettii 12D 8019790 YP_002982076.1 CDS Rpic12D_2130 NC_012856.1 2270838 2271623 D KEGG: gur:Gura_0809 hypothetical protein; hypothetical protein 2270838..2271623 Ralstonia pickettii 12D 8019791 YP_002982077.1 CDS Rpic12D_2131 NC_012856.1 2271970 2272275 D KEGG: rha:RHA1_ro00764 hypothetical protein; hypothetical protein 2271970..2272275 Ralstonia pickettii 12D 8019792 YP_002982078.1 CDS Rpic12D_2132 NC_012856.1 2272749 2273039 R KEGG: rme:Rmet_4495 hypothetical protein; hypothetical protein complement(2272749..2273039) Ralstonia pickettii 12D 8019793 YP_002982079.1 CDS Rpic12D_2133 NC_012856.1 2273144 2273473 D KEGG: bps:BPSL3352 hypothetical protein; hypothetical protein 2273144..2273473 Ralstonia pickettii 12D 8019794 YP_002982080.1 CDS Rpic12D_2134 NC_012856.1 2273674 2273841 D hypothetical protein 2273674..2273841 Ralstonia pickettii 12D 8019795 YP_002982081.1 CDS Rpic12D_2135 NC_012856.1 2273841 2274161 D hypothetical protein 2273841..2274161 Ralstonia pickettii 12D 8019796 YP_002982082.1 CDS Rpic12D_2136 NC_012856.1 2274322 2274828 D KEGG: LOC764463; hypothetical protein LOC764463; hypothetical protein 2274322..2274828 Ralstonia pickettii 12D 8019797 YP_002982083.1 CDS Rpic12D_2137 NC_012856.1 2275099 2275350 D hypothetical protein 2275099..2275350 Ralstonia pickettii 12D 8019798 YP_002982084.1 CDS Rpic12D_2138 NC_012856.1 2275447 2276967 D KEGG: rme:Rmet_4492 hypothetical protein; hypothetical protein 2275447..2276967 Ralstonia pickettii 12D 8019799 YP_002982085.1 CDS Rpic12D_2139 NC_012856.1 2276980 2277309 D KEGG: har:HEAR1528 hypothetical protein; hypothetical protein 2276980..2277309 Ralstonia pickettii 12D 8019800 YP_002982086.1 CDS Rpic12D_2140 NC_012856.1 2277311 2278141 D PFAM: zonular occludens toxin; KEGG: har:HEAR1530 IKe filamentous prophage; protein involved in phage assembly; zonular occludens toxin 2277311..2278141 Ralstonia pickettii 12D 8019801 YP_002982087.1 CDS Rpic12D_2141 NC_012856.1 2278149 2278313 D hypothetical protein 2278149..2278313 Ralstonia pickettii 12D 8019802 YP_002982088.1 CDS Rpic12D_2142 NC_012856.1 2278734 2279663 D KEGG: rme:Rmet_4488 hypothetical protein; hypothetical protein 2278734..2279663 Ralstonia pickettii 12D 8019803 YP_002982089.1 CDS Rpic12D_2143 NC_012856.1 2279635 2279844 R hypothetical protein complement(2279635..2279844) Ralstonia pickettii 12D 8019804 YP_002982090.1 CDS Rpic12D_2144 NC_012856.1 2279863 2280453 R PFAM: Resolvase domain; KEGG: bpd:BURPS668_2984 site-specific recombinases, DNA invertase Pin; resolvase domain-containing protein complement(2279863..2280453) Ralstonia pickettii 12D 8019805 YP_002982091.1 CDS Rpic12D_2145 NC_012856.1 2280675 2281991 R catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase complement(2280675..2281991) Ralstonia pickettii 12D 8019807 YP_002982092.1 CDS Rpic12D_2146 NC_012856.1 2282071 2283420 R PFAM: ATPase AAA; magnesium chelatase ChlI subunit; SMART: AAA ATPase; KEGG: rso:RSc2338 recombination factor protein RarA; recombination factor protein RarA complement(2282071..2283420) Ralstonia pickettii 12D 8019808 YP_002982093.1 CDS Rpic12D_2147 NC_012856.1 2283468 2284772 R PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: bch:Bcen2424_5285 major facilitator transporter; major facilitator superfamily protein complement(2283468..2284772) Ralstonia pickettii 12D 8019809 YP_002982094.1 CDS Rpic12D_2148 NC_012856.1 2284804 2285763 R TIGRFAM: agmatinase; PFAM: arginase/agmatinase/formiminoglutamase; KEGG: bte:BTH_II0784 agmatinase; agmatinase complement(2284804..2285763) Ralstonia pickettii 12D 8019810 YP_002982095.1 CDS Rpic12D_2149 NC_012856.1 2285897 2286793 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bpy:Bphyt_1040 transcriptional regulator, LysR family; LysR family transcriptional regulator 2285897..2286793 Ralstonia pickettii 12D 8019811 YP_002982096.1 CDS Rpic12D_2150 NC_012856.1 2286809 2287234 R KEGG: rso:RSc2339 lipoprotein transmembrane; lipoprotein transmembrane complement(2286809..2287234) Ralstonia pickettii 12D 8019812 YP_002982097.1 CDS lolA NC_012856.1 2287281 2287928 R participates with LolB in the incorporation of lipoprotein into the outer membrane; outer-membrane lipoprotein carrier protein complement(2287281..2287928) Ralstonia pickettii 12D 8019813 YP_002982098.1 CDS Rpic12D_2152 NC_012856.1 2288048 2290393 R PFAM: cell divisionFtsK/SpoIIIE; KEGG: rso:RSc2341 cell division FtsK transmembrane protein; cell division protein FtsK complement(2288048..2290393) Ralstonia pickettii 12D 8019814 YP_002982099.1 CDS Rpic12D_2153 NC_012856.1 2290613 2291569 D TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rso:RSc2342 thioredoxin reductase oxidoreductase protein; thioredoxin reductase 2290613..2291569 Ralstonia pickettii 12D 8019815 YP_002982100.1 CDS Rpic12D_2154 NC_012856.1 2291699 2292364 D PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2; KEGG: rso:RSc2343 hypothetical protein; Smr protein/MutS2 2291699..2292364 Ralstonia pickettii 12D 8019816 YP_002982101.1 CDS Rpic12D_2155 NC_012856.1 2292410 2293033 D PFAM: protein of unknown function UPF0126; KEGG: rso:RSc2344 hypothetical protein; hypothetical protein 2292410..2293033 Ralstonia pickettii 12D 8019817 YP_002982102.1 CDS Rpic12D_2156 NC_012856.1 2293077 2293415 R PFAM: nitrogen regulatory protein P-II; KEGG: rso:RSc2345 nitrogen regulatory P-II transcription regulator protein; nitrogen regulatory protein P-II complement(2293077..2293415) Ralstonia pickettii 12D 8019818 YP_002982103.1 CDS Rpic12D_2157 NC_012856.1 2293430 2294056 R PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rso:RSc2346 methyltransferase protein; type 11 methyltransferase complement(2293430..2294056) Ralstonia pickettii 12D 8019819 YP_002982104.1 CDS Rpic12D_2158 NC_012856.1 2294066 2295703 R NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase complement(2294066..2295703) Ralstonia pickettii 12D 8019820 YP_002982105.1 CDS Rpic12D_2159 NC_012856.1 2295759 2296991 D PFAM: protein of unknown function DUF482; KEGG: rso:RSc2348 hypothetical protein; hypothetical protein 2295759..2296991 Ralstonia pickettii 12D 8019821 YP_002982106.1 CDS Rpic12D_2160 NC_012856.1 2297548 2298075 R catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase complement(2297548..2298075) Ralstonia pickettii 12D 8019822 YP_002982107.1 CDS Rpic12D_2161 NC_012856.1 2298245 2299681 D PFAM: aldehyde Dehydrogenase; KEGG: rso:RSc2350 aldehyde dehydrogenase; aldehyde dehydrogenase 2298245..2299681 Ralstonia pickettii 12D 8019823 YP_002982108.1 CDS fabG NC_012856.1 2299722 2300480 D Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 2299722..2300480 Ralstonia pickettii 12D 8019824 YP_002982109.1 CDS Rpic12D_2163 NC_012856.1 2300603 2301937 D PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc2352 permease transmembrane protein; major facilitator superfamily protein 2300603..2301937 Ralstonia pickettii 12D 8019825 YP_002982110.1 CDS Rpic12D_2164 NC_012856.1 2301985 2303178 R PFAM: HemY domain protein; KEGG: rso:RSc2355 protein porphyrin biosynthesis; HemY domain-containing protein complement(2301985..2303178) Ralstonia pickettii 12D 8019826 YP_002982111.1 CDS Rpic12D_2165 NC_012856.1 2303181 2305178 R catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane and the formation of precorrin-2 from uroporphyrin III and S-adenosyl-L-methionine by two sequential methylation reactions; functions in tetrapyrrole and heme biosynthesis; bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase complement(2303181..2305178) Ralstonia pickettii 12D 8019827 YP_002982112.1 CDS hemC NC_012856.1 2305310 2306326 R transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase complement(2305310..2306326) Ralstonia pickettii 12D 8019828 YP_002982113.1 CDS Rpic12D_2167 NC_012856.1 2306436 2309444 D catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase 2306436..2309444 Ralstonia pickettii 12D 8019829 YP_002982114.1 CDS Rpic12D_2168 NC_012856.1 2309445 2310896 R PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_4076 major facilitator transporter; major facilitator superfamily protein complement(2309445..2310896) Ralstonia pickettii 12D 8019830 YP_002982115.1 CDS Rpic12D_2169 NC_012856.1 2310998 2311882 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bam:Bamb_3487 LysR family transcriptional regulator; LysR family transcriptional regulator 2310998..2311882 Ralstonia pickettii 12D 8019831 YP_002982116.1 CDS Rpic12D_2170 NC_012856.1 2311915 2312520 R KEGG: rso:RSc2360 hypothetical protein; hypothetical protein complement(2311915..2312520) Ralstonia pickettii 12D 8019832 YP_002982117.1 CDS Rpic12D_2171 NC_012856.1 2312559 2313374 D TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: rso:RSc2361 RNA polymerase sigma-E factor sigma-24 homolog transcription regulator protein; ECF subfamily RNA polymerase sigma-24 subunit 2312559..2313374 Ralstonia pickettii 12D 8019833 YP_002982118.1 CDS Rpic12D_2172 NC_012856.1 2313374 2314093 D KEGG: rso:RSc2362 hypothetical protein; hypothetical protein 2313374..2314093 Ralstonia pickettii 12D 8019834 YP_002982119.1 CDS Rpic12D_2173 NC_012856.1 2314197 2315612 D catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 2314197..2315612 Ralstonia pickettii 12D 8019835 YP_002982120.1 CDS Rpic12D_2174 NC_012856.1 2315685 2317964 R PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: rso:RSc2365 biodegradative arginine decarboxylase protein; lysine decarboxylase complement(2315685..2317964) Ralstonia pickettii 12D 8019836 YP_002982121.1 CDS dcd NC_012856.1 2318038 2318604 R Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase complement(2318038..2318604) Ralstonia pickettii 12D 8019837 YP_002982122.1 CDS Rpic12D_2176 NC_012856.1 2318800 2319675 R PFAM: formate dehydrogenase subunit FdhD; KEGG: rso:RSc2367 FdhD protein; formate dehydrogenase subunit FdhD complement(2318800..2319675) Ralstonia pickettii 12D 8019838 YP_002982123.1 CDS Rpic12D_2177 NC_012856.1 2319766 2320317 R PFAM: superoxide dismutase copper/zinc binding; KEGG: rso:RSc2368 superoxide dismutase Cu-Zn precursor protein; copper/zinc binding superoxide dismutase complement(2319766..2320317) Ralstonia pickettii 12D 8019839 YP_002982124.1 CDS Rpic12D_2178 NC_012856.1 2320400 2320723 R KEGG: rso:RSc2369 signal peptide protein; signal peptide protein complement(2320400..2320723) Ralstonia pickettii 12D 8019840 YP_002982125.1 CDS Rpic12D_2179 NC_012856.1 2320759 2321922 R TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: rso:RSc2370 hypothetical protein; formate dehydrogenase subunit gamma complement(2320759..2321922) Ralstonia pickettii 12D 8019841 YP_002982126.1 CDS Rpic12D_2180 NC_012856.1 2321946 2322191 R KEGG: rso:RSc2371 lipoprotein; lipoprotein complement(2321946..2322191) Ralstonia pickettii 12D 8019842 YP_002982127.1 CDS Rpic12D_2181 NC_012856.1 2322188 2322856 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rso:RSc2372 formate dehydrogenase iron-sulfur subunit; 4Fe-4S ferredoxin complement(2322188..2322856) Ralstonia pickettii 12D 8019843 YP_002982128.1 CDS Rpic12D_2182 NC_012856.1 2322873 2325878 R PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: rso:RSc2373 formate dehydrogenase large subunit; molybdopterin oxidoreductase complement(2322873..2325878) Ralstonia pickettii 12D 8019844 YP_002982129.1 CDS Rpic12D_2183 NC_012856.1 2325946 2326197 R TIGRFAM: formate dehydrogenase region TAT target; KEGG: rso:RSc2374 transmembrane protein; formate dehydrogenase region TAT target complement(2325946..2326197) Ralstonia pickettii 12D 8019845 YP_002982130.1 CDS Rpic12D_2184 NC_012856.1 2326433 2327104 R PFAM: cytoplasmic chaperone TorD family protein; KEGG: rso:RSc2375 hypothetical protein; cytoplasmic chaperone TorD family protein complement(2326433..2327104) Ralstonia pickettii 12D 8019846 YP_002982131.1 CDS Rpic12D_2185 NC_012856.1 2327150 2329309 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rso:RSc2376 ferredoxin protein; 4Fe-4S ferredoxin complement(2327150..2329309) Ralstonia pickettii 12D 8019847 YP_002982132.1 CDS Rpic12D_2186 NC_012856.1 2329390 2329950 R KEGG: rso:RSc2377 proline rich protein; proline rich protein complement(2329390..2329950) Ralstonia pickettii 12D 8019848 YP_002982133.1 CDS Rpic12D_2187 NC_012856.1 2329962 2330489 R KEGG: rso:RSc2378 hypothetical protein; hypothetical protein complement(2329962..2330489) Ralstonia pickettii 12D 8019849 YP_002982134.1 CDS Rpic12D_2188 NC_012856.1 2330494 2331585 R PFAM: protein of unknown function DUF59; KEGG: rso:RSc2379 MRP family ATP-binding protein; hypothetical protein complement(2330494..2331585) Ralstonia pickettii 12D 8019850 YP_002982135.1 CDS Rpic12D_2189 NC_012856.1 2331788 2332417 D PFAM: OmpA/MotB domain protein; 17 kDa surface antigen; KEGG: rso:RSc2380 hypothetical protein; OmpA/MotB domain-containing protein 2331788..2332417 Ralstonia pickettii 12D 8019851 YP_002982136.1 CDS metG NC_012856.1 2332663 2334792 D methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 2332663..2334792 Ralstonia pickettii 12D 8019852 YP_002982137.1 CDS Rpic12D_2191 NC_012856.1 2335366 2335908 R KEGG: rso:RSc2382 lipoprotein; lipoprotein complement(2335366..2335908) Ralstonia pickettii 12D 8019853 YP_002982138.1 CDS Rpic12D_2192 NC_012856.1 2336004 2339918 R PFAM: protein of unknown function DUF490; KEGG: rso:RSc2383 signal peptide protein; hypothetical protein complement(2336004..2339918) Ralstonia pickettii 12D 8019854 YP_002982139.1 CDS Rpic12D_2193 NC_012856.1 2339921 2341708 R PFAM: surface antigen (D15); KEGG: rso:RSc2384 lipoprotein; surface antigen (D15) complement(2339921..2341708) Ralstonia pickettii 12D 8019855 YP_002982140.1 CDS Rpic12D_2194 NC_012856.1 2341946 2342134 D KEGG: rso:RSc2385 hypothetical protein; hypothetical protein 2341946..2342134 Ralstonia pickettii 12D 8019856 YP_002982141.1 CDS Rpic12D_2195 NC_012856.1 2342174 2343055 D PFAM: chromosome segregation and condensation protein ScpA; KEGG: rso:RSc2386 hypothetical protein; chromosome segregation and condensation protein ScpA 2342174..2343055 Ralstonia pickettii 12D 8019857 YP_002982142.1 CDS panC NC_012856.1 2343094 2343945 D catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 2343094..2343945 Ralstonia pickettii 12D 8019858 YP_002982143.1 CDS Rpic12D_2197 NC_012856.1 2343997 2344662 R PFAM: cobyrinic acid ac-diamide synthase; KEGG: rso:RSc2389 partition-related protein; cobyrinic acid ac-diamide synthase complement(2343997..2344662) Ralstonia pickettii 12D 8019859 YP_002982144.1 CDS Rpic12D_2198 NC_012856.1 2344738 2346183 R catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation; cobyric acid synthase complement(2344738..2346183) Ralstonia pickettii 12D 8019860 YP_002982145.1 CDS Rpic12D_2199 NC_012856.1 2346296 2346871 D PFAM: cobalbumin biosynthesis protein; KEGG: rso:RSc2391 cobalamin biosynthesis bifunctional protein: cobinamide kinase and cobinamide phosphate guanylyltransferase; adenosylcobinamide kinase 2346296..2346871 Ralstonia pickettii 12D 8019861 YP_002982146.1 CDS cobD NC_012856.1 2346868 2347848 D CobD; CbiD in Salmonella; converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group; cobalamin biosynthesis protein 2346868..2347848 Ralstonia pickettii 12D 8019862 YP_002982147.1 CDS Rpic12D_2201 NC_012856.1 2347845 2348852 D cobalamin biosynthesis protein; decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin; structurally similar to histidinol phosphate aminotransferase; threonine-phosphate decarboxylase 2347845..2348852 Ralstonia pickettii 12D 8019863 YP_002982148.1 CDS Rpic12D_2202 NC_012856.1 2348864 2349820 D PFAM: periplasmic binding protein; KEGG: rso:RSc2394 substrate-binding periplasmic (PBP) ABC transporter protein; periplasmic binding protein 2348864..2349820 Ralstonia pickettii 12D 8019864 YP_002982149.1 CDS Rpic12D_2203 NC_012856.1 2349833 2350411 R TIGRFAM: alpha-ribazole phosphatase; PFAM: phosphoglycerate mutase; KEGG: rso:RSc2395 hypothetical protein; alpha-ribazole phosphatase complement(2349833..2350411) Ralstonia pickettii 12D 8019865 YP_002982150.1 CDS cobS NC_012856.1 2350396 2351166 R catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole; cobalamin synthase complement(2350396..2351166) Ralstonia pickettii 12D 8019866 YP_002982151.1 CDS cobT NC_012856.1 2351163 2352227 R catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase complement(2351163..2352227) Ralstonia pickettii 12D 8019867 YP_002982152.1 CDS Rpic12D_2206 NC_012856.1 2352227 2352847 R KEGG: cti:RALTA_A2443 cob(I)alamin and cobinamide ATP-dependent adenolsyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; cob(I)alamin adenosyltransferase complement(2352227..2352847) Ralstonia pickettii 12D 8019868 YP_002982153.1 CDS Rpic12D_2207 NC_012856.1 2352837 2353676 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RSc2398 ABC transporter ATP-binding protein; ABC transporter complement(2352837..2353676) Ralstonia pickettii 12D 8019869 YP_002982154.1 CDS Rpic12D_2208 NC_012856.1 2353673 2354692 R PFAM: transport system permease protein; KEGG: rso:RSc2399 transmembrane ABC transporter protein; ABC transporter permease complement(2353673..2354692) Ralstonia pickettii 12D 8019870 YP_002982155.1 CDS Rpic12D_2209 NC_012856.1 2354689 2356563 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rso:RSc2400 outer membrane receptor protein; TonB-dependent receptor complement(2354689..2356563) Ralstonia pickettii 12D 8019871 YP_002982156.1 CDS Rpic12D_2210 NC_012856.1 2357119 2357439 D KEGG: rso:RSc2401 hypothetical protein; hypothetical protein 2357119..2357439 Ralstonia pickettii 12D 8019872 YP_002982157.1 CDS Rpic12D_2211 NC_012856.1 2357442 2357759 D PFAM: protein of unknown function DUF710; KEGG: rso:RSc2402 hypothetical protein; hypothetical protein 2357442..2357759 Ralstonia pickettii 12D 8019873 YP_002982158.1 CDS Rpic12D_2212 NC_012856.1 2358292 2358828 D PFAM: protein of unknown function DUF55; KEGG: rso:RSc2403 hypothetical protein; hypothetical protein 2358292..2358828 Ralstonia pickettii 12D 8019875 YP_002982159.1 CDS Rpic12D_2213 NC_012856.1 2358923 2359624 D PFAM: protein of unknown function DUF541; KEGG: reu:Reut_A0649 hypothetical protein; hypothetical protein 2358923..2359624 Ralstonia pickettii 12D 8019876 YP_002982160.1 CDS Rpic12D_2214 NC_012856.1 2359688 2360590 R transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase complement(2359688..2360590) Ralstonia pickettii 12D 8019877 YP_002982161.1 CDS Rpic12D_2215 NC_012856.1 2360605 2361549 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RSc2411 transcription regulator protein; LysR family transcriptional regulator complement(2360605..2361549) Ralstonia pickettii 12D 8019878 YP_002982162.1 CDS Rpic12D_2216 NC_012856.1 2361678 2363351 D catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 2361678..2363351 Ralstonia pickettii 12D 8019879 YP_002982163.1 CDS Rpic12D_2217 NC_012856.1 2363408 2363833 R KEGG: rso:RSc2413 hypothetical protein; hypothetical protein complement(2363408..2363833) Ralstonia pickettii 12D 8019880 YP_002982164.1 CDS Rpic12D_2218 NC_012856.1 2363830 2364258 R binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit chi complement(2363830..2364258) Ralstonia pickettii 12D 8019881 YP_002982165.1 CDS Rpic12D_2219 NC_012856.1 2364281 2365789 R catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase complement(2364281..2365789) Ralstonia pickettii 12D 8019882 YP_002982166.1 CDS Rpic12D_2220 NC_012856.1 2365904 2367022 D PFAM: permease YjgP/YjgQ family protein; KEGG: rso:RSc2416 hypothetical protein; YjgP/YjgQ family permease 2365904..2367022 Ralstonia pickettii 12D 8019883 YP_002982167.1 CDS Rpic12D_2221 NC_012856.1 2367022 2368215 D PFAM: permease YjgP/YjgQ family protein; KEGG: rso:RSc2417 hypothetical protein; YjgP/YjgQ family permease 2367022..2368215 Ralstonia pickettii 12D 8019884 YP_002982168.1 CDS Rpic12D_2222 NC_012856.1 2368215 2368586 D PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: rso:RSc2418 hypothetical protein; cobalamin (vitamin B12) biosynthesis CbiX protein 2368215..2368586 Ralstonia pickettii 12D 8019885 YP_002982169.1 CDS Rpic12D_2223 NC_012856.1 2368597 2368998 R PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: rso:RSc2419 5-carboxymethyl-2-hydroxymuconate delta-isomerase protein; 5-carboxymethyl-2-hydroxymuconate isomerase complement(2368597..2368998) Ralstonia pickettii 12D 8019886 YP_002982170.1 CDS Rpic12D_2224 NC_012856.1 2369134 2369943 R catalyzes 2 sequential methylations, the formation of precorrin-1 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and uroporphyrin III, and the formation of precorrin-2 and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and precorrin-1; uroporphyrin-III C-methyltransferase complement(2369134..2369943) Ralstonia pickettii 12D 8019887 YP_002982171.1 CDS Rpic12D_2225 NC_012856.1 2370000 2371307 R KEGG: rso:RSc2421 sulfate adenylyltransferase subunit 1 protein; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; sulfate adenylyltransferase large subunit complement(2370000..2371307) Ralstonia pickettii 12D 8019888 YP_002982172.1 CDS Rpic12D_2226 NC_012856.1 2371310 2372260 R with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 complement(2371310..2372260) Ralstonia pickettii 12D 8019889 YP_002982173.1 CDS Rpic12D_2227 NC_012856.1 2372271 2373086 R catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase complement(2372271..2373086) Ralstonia pickettii 12D 8019890 YP_002982174.1 CDS Rpic12D_2228 NC_012856.1 2373083 2373628 R PFAM: conserved hypothetical protein; KEGG: rso:RSc2424 hypothetical protein; hypothetical protein complement(2373083..2373628) Ralstonia pickettii 12D 8019891 YP_002982175.1 CDS Rpic12D_2229 NC_012856.1 2373646 2375307 R PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: rso:RSc2425 sulfite reductase oxidoreductase protein; sulfite reductase complement(2373646..2375307) Ralstonia pickettii 12D 8019892 YP_002982176.1 CDS Rpic12D_2230 NC_012856.1 2375433 2376206 R PFAM: protein of unknown function DUF81; KEGG: rso:RSc2426 hypothetical protein; hypothetical protein complement(2375433..2376206) Ralstonia pickettii 12D 8019893 YP_002982177.1 CDS Rpic12D_2231 NC_012856.1 2376361 2377302 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RSc2427 transcriptional regulator CysB-like protein; CysB family transcriptional regulator 2376361..2377302 Ralstonia pickettii 12D 8019894 YP_002982178.1 CDS Rpic12D_2232 NC_012856.1 2377343 2378512 D KEGG: rso:RSc2428 amino acid-binding periplasmic (PBP) ABC transporter protein; amino acid ABC transporter substrate-binding protein 2377343..2378512 Ralstonia pickettii 12D 8019895 YP_002982179.1 CDS Rpic12D_2233 NC_012856.1 2378534 2379418 D PFAM: 6-phosphogluconate dehydrogenase NAD-binding; NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: rso:RSc2429 oxidoreductase protein; 2-hydroxy-3-oxopropionate reductase 2378534..2379418 Ralstonia pickettii 12D 8019896 YP_002982180.1 CDS Rpic12D_2234 NC_012856.1 2379729 2380754 D PFAM: integrase family protein; KEGG: bmj:BMULJ_01444 bacteriophage integrase / tyrosine recombinase; integrase family protein 2379729..2380754 Ralstonia pickettii 12D 8019898 YP_002982181.1 CDS Rpic12D_2235 NC_012856.1 2380756 2381034 R KEGG: aav:Aave_1637 hypothetical protein; hypothetical protein complement(2380756..2381034) Ralstonia pickettii 12D 8019899 YP_002982182.1 CDS Rpic12D_2236 NC_012856.1 2381031 2381444 R KEGG: ace:Acel_0587 peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins; D,D-carboxypeptidase VanY/endolysin complement(2381031..2381444) Ralstonia pickettii 12D 8019900 YP_002982183.1 CDS Rpic12D_2237 NC_012856.1 2381450 2381965 R KEGG: bvi:Bcep1808_4567 hypothetical protein; hypothetical protein complement(2381450..2381965) Ralstonia pickettii 12D 8019901 YP_002982184.1 CDS Rpic12D_2238 NC_012856.1 2382046 2382591 R PFAM: glycoside hydrolase family 19; KEGG: pst:PSPTO_4037 lysozyme; glycoside hydrolase family protein complement(2382046..2382591) Ralstonia pickettii 12D 8019902 YP_002982185.1 CDS Rpic12D_2239 NC_012856.1 2382584 2382907 R KEGG: abm:ABSDF1052 bacteriophage protein; bacteriophage protein complement(2382584..2382907) Ralstonia pickettii 12D 8019903 YP_002982186.1 CDS Rpic12D_2240 NC_012856.1 2383108 2384229 D PFAM: acyltransferase 3; KEGG: bcj:BCAM1009 acyltransferase; acyltransferase 2383108..2384229 Ralstonia pickettii 12D 8019904 YP_002982187.1 CDS Rpic12D_2241 NC_012856.1 2384351 2384632 D KEGG: bam:Bamb_2404 hypothetical protein; XRE family transcriptional regulator 2384351..2384632 Ralstonia pickettii 12D 8019905 YP_002982188.1 CDS Rpic12D_2242 NC_012856.1 2384734 2385276 D PFAM: lipolytic protein G-D-S-L family; KEGG: hypothetical protein; G-D-S-L family lipolytic protein 2384734..2385276 Ralstonia pickettii 12D 8019906 YP_002982189.1 CDS Rpic12D_2243 NC_012856.1 2385517 2386917 R KEGG: bbt:BBta_6579 hypothetical protein; hypothetical protein complement(2385517..2386917) Ralstonia pickettii 12D 8019907 YP_002982190.1 CDS Rpic12D_2244 NC_012856.1 2386978 2387637 R KEGG: bvi:Bcep1808_4559 bacteriophage protein; bacteriophage protein complement(2386978..2387637) Ralstonia pickettii 12D 8019908 YP_002982191.1 CDS Rpic12D_2245 NC_012856.1 2387639 2388829 R KEGG: reu:Reut_A2410 bacteriophage protein; bacteriophage protein complement(2387639..2388829) Ralstonia pickettii 12D 8019909 YP_002982192.1 CDS Rpic12D_2246 NC_012856.1 2388826 2389179 R KEGG: reu:Reut_A2409 hypothetical protein; hypothetical protein complement(2388826..2389179) Ralstonia pickettii 12D 8019910 YP_002982193.1 CDS Rpic12D_2247 NC_012856.1 2389188 2389859 R KEGG: bcj:BCAL2970 hypothetical protein; hypothetical protein complement(2389188..2389859) Ralstonia pickettii 12D 8019911 YP_002982194.1 CDS Rpic12D_2248 NC_012856.1 2389897 2390820 R KEGG: reu:Reut_A2406 hypothetical protein; hypothetical protein complement(2389897..2390820) Ralstonia pickettii 12D 8019912 YP_002982195.1 CDS Rpic12D_2249 NC_012856.1 2390817 2391128 R KEGG: bcj:BCAM1080 hypothetical protein; hypothetical protein complement(2390817..2391128) Ralstonia pickettii 12D 8019913 YP_002982196.1 CDS Rpic12D_2250 NC_012856.1 2391128 2391742 R KEGG: bmj:BMULJ_01428 bacteriophage protein; hypothetical protein complement(2391128..2391742) Ralstonia pickettii 12D 8019914 YP_002982197.1 CDS Rpic12D_2251 NC_012856.1 2391739 2393637 R KEGG: sty:STY1061 bacteriophage protein; bacteriophage protein complement(2391739..2393637) Ralstonia pickettii 12D 8019915 YP_002982198.1 CDS Rpic12D_2252 NC_012856.1 2393627 2393782 R KEGG: bcj:BCAM1077 hypothetical protein; hypothetical protein complement(2393627..2393782) Ralstonia pickettii 12D 8019916 YP_002982199.1 CDS Rpic12D_2253 NC_012856.1 2393818 2394264 R KEGG: reu:Reut_A2402 bacteriophage protein; bacteriophage protein complement(2393818..2394264) Ralstonia pickettii 12D 8019917 YP_002982200.1 CDS Rpic12D_2254 NC_012856.1 2394277 2394717 R KEGG: bcj:BCAM1075 hypothetical protein; hypothetical protein complement(2394277..2394717) Ralstonia pickettii 12D 8019918 YP_002982201.1 CDS Rpic12D_2255 NC_012856.1 2394726 2396543 R KEGG: bcj:BCAM1074 exported phage protein; exported phage protein complement(2394726..2396543) Ralstonia pickettii 12D 8019919 YP_002982202.1 CDS Rpic12D_2256 NC_012856.1 2396603 2397184 R KEGG: bmj:BMULJ_01423 bacteriophage protein; bacteriophage protein complement(2396603..2397184) Ralstonia pickettii 12D 8019920 YP_002982203.1 CDS Rpic12D_2257 NC_012856.1 2397188 2397559 R KEGG: bcj:BCAM1072 hypothetical protein; hypothetical protein complement(2397188..2397559) Ralstonia pickettii 12D 8019921 YP_002982204.1 CDS Rpic12D_2258 NC_012856.1 2397559 2398092 R KEGG: sgl:SG1813 hypothetical protein; hypothetical protein complement(2397559..2398092) Ralstonia pickettii 12D 8019922 YP_002982205.1 CDS Rpic12D_2259 NC_012856.1 2398089 2398475 R KEGG: bmj:BMULJ_01420 bacteriophage protein; bacteriophage protein complement(2398089..2398475) Ralstonia pickettii 12D 8019923 YP_002982206.1 CDS Rpic12D_2260 NC_012856.1 2398472 2398660 R KEGG: bmj:BMULJ_01419 truncated bacteriophage protein; truncated bacteriophage protein complement(2398472..2398660) Ralstonia pickettii 12D 8019924 YP_002982207.1 CDS Rpic12D_2261 NC_012856.1 2398663 2399652 R KEGG: reu:Reut_A2394 bacteriophage protein; bacteriophage protein complement(2398663..2399652) Ralstonia pickettii 12D 8019925 YP_002982208.1 CDS Rpic12D_2262 NC_012856.1 2399760 2400245 R KEGG: reu:Reut_A2393 bacteriophage protein; bacteriophage protein complement(2399760..2400245) Ralstonia pickettii 12D 8019926 YP_002982209.1 CDS Rpic12D_2263 NC_012856.1 2400259 2401563 R KEGG: reu:Reut_A2392 bacteriophage protein; bacteriophage protein complement(2400259..2401563) Ralstonia pickettii 12D 8019927 YP_002982210.1 CDS Rpic12D_2264 NC_012856.1 2401566 2402198 R TIGRFAM: phage head morphogenesis protein, SPP1 gp7 family; PFAM: head morphogenesis protein SPP1 gp7; KEGG: reu:Reut_A2390 phage head morphogenesis protein, SPP1 gp7; phage head morphogenesis protein complement(2401566..2402198) Ralstonia pickettii 12D 8019928 YP_002982211.1 CDS Rpic12D_2265 NC_012856.1 2402149 2403720 R TIGRFAM: phage-associated protein, HI1409 family; KEGG: reu:Reut_A2389 hypothetical protein; phage-associated protein complement(2402149..2403720) Ralstonia pickettii 12D 8019929 YP_002982212.1 CDS Rpic12D_2266 NC_012856.1 2403717 2405255 R TIGRFAM: phage uncharacterized protein; PFAM: protein of unknown function DUF264; KEGG: reu:Reut_A2388 phage uncharacterized protein, C-terminal; phage protein complement(2403717..2405255) Ralstonia pickettii 12D 8019930 YP_002982213.1 CDS Rpic12D_2267 NC_012856.1 2405212 2405868 R KEGG: pmr:PMI0496 phage protein; phage protein complement(2405212..2405868) Ralstonia pickettii 12D 8019931 YP_002982214.1 CDS Rpic12D_2268 NC_012856.1 2406277 2406450 R KEGG: bmu:Bmul_1830 hypothetical protein; hypothetical protein complement(2406277..2406450) Ralstonia pickettii 12D 8019932 YP_002982215.1 CDS Rpic12D_2269 NC_012856.1 2406627 2406827 R hypothetical protein complement(2406627..2406827) Ralstonia pickettii 12D 8019933 YP_002982216.1 CDS Rpic12D_2270 NC_012856.1 2406830 2407180 R KEGG: bph:Bphy_1852 hypothetical protein; hypothetical protein complement(2406830..2407180) Ralstonia pickettii 12D 8019934 YP_002982217.1 CDS Rpic12D_2271 NC_012856.1 2407177 2407602 R KEGG: bmj:BMULJ_01410 bacteriophage protein; bacteriophage protein complement(2407177..2407602) Ralstonia pickettii 12D 8019935 YP_002982218.1 CDS Rpic12D_2272 NC_012856.1 2407614 2407889 R KEGG: aha:AHA_2040 hypothetical protein; hypothetical protein complement(2407614..2407889) Ralstonia pickettii 12D 8019936 YP_002982219.1 CDS Rpic12D_2273 NC_012856.1 2407886 2408407 R KEGG: bpt:Bpet0967 hypothetical protein; hypothetical protein complement(2407886..2408407) Ralstonia pickettii 12D 8019937 YP_002982220.1 CDS Rpic12D_2274 NC_012856.1 2408404 2408814 R KEGG: dac:Daci_4127 hypothetical protein; hypothetical protein complement(2408404..2408814) Ralstonia pickettii 12D 8019938 YP_002982221.1 CDS Rpic12D_2275 NC_012856.1 2408924 2409373 R KEGG: rso:RSc3236 bacteriophage-related protein; putative bacteriophage-like protein complement(2408924..2409373) Ralstonia pickettii 12D 8019939 YP_002982222.1 CDS Rpic12D_2276 NC_012856.1 2409373 2409585 R hypothetical protein complement(2409373..2409585) Ralstonia pickettii 12D 8019940 YP_002982223.1 CDS Rpic12D_2277 NC_012856.1 2409582 2410355 R KEGG: bbr:BB2205 hypothetical protein; hypothetical protein complement(2409582..2410355) Ralstonia pickettii 12D 8019941 YP_002982224.1 CDS Rpic12D_2278 NC_012856.1 2410412 2411779 R TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: bvi:Bcep1808_1163 DnaB domain-containing protein; replicative DNA helicase complement(2410412..2411779) Ralstonia pickettii 12D 8019942 YP_002982225.1 CDS Rpic12D_2279 NC_012856.1 2411776 2412609 R KEGG: eugene3.06770005.; hypothetical protein complement(2411776..2412609) Ralstonia pickettii 12D 8019943 YP_002982226.1 CDS Rpic12D_2280 NC_012856.1 2412767 2413063 R hypothetical protein complement(2412767..2413063) Ralstonia pickettii 12D 8019944 YP_002982227.1 CDS Rpic12D_2281 NC_012856.1 2413077 2413469 R KEGG: xfm:Xfasm12_1163 hypothetical protein; hypothetical protein complement(2413077..2413469) Ralstonia pickettii 12D 8019945 YP_002982228.1 CDS Rpic12D_2282 NC_012856.1 2413568 2413807 R KEGG: dac:Daci_1620 XRE family transcriptional regulator; XRE family transcriptional regulator complement(2413568..2413807) Ralstonia pickettii 12D 8019946 YP_002982229.1 CDS Rpic12D_2283 NC_012856.1 2413882 2414760 D PFAM: peptidase S24 and S26 domain protein; KEGG: bmj:BMULJ_01401 bacteriophage repressor protein CI; phage repressor 2413882..2414760 Ralstonia pickettii 12D 8019947 YP_002982230.1 CDS Rpic12D_2284 NC_012856.1 2415360 2415671 D hypothetical protein 2415360..2415671 Ralstonia pickettii 12D 8019948 YP_002982231.1 CDS Rpic12D_2285 NC_012856.1 2415675 2415836 D hypothetical protein 2415675..2415836 Ralstonia pickettii 12D 8019949 YP_002982232.1 CDS Rpic12D_2286 NC_012856.1 2415849 2416205 D hypothetical protein 2415849..2416205 Ralstonia pickettii 12D 8019950 YP_002982233.1 CDS Rpic12D_2287 NC_012856.1 2416212 2416373 D hypothetical protein 2416212..2416373 Ralstonia pickettii 12D 8019951 YP_002982234.1 CDS Rpic12D_2288 NC_012856.1 2416399 2417232 D PFAM: pentapeptide repeat protein; KEGG: mms:mma_2224 pentapeptide repeat-containing protein; pentapeptide repeat-containing protein 2416399..2417232 Ralstonia pickettii 12D 8019952 YP_002982235.1 CDS Rpic12D_2289 NC_012856.1 2417262 2417459 D hypothetical protein 2417262..2417459 Ralstonia pickettii 12D 8019953 YP_002982236.1 CDS Rpic12D_2290 NC_012856.1 2417478 2417624 D hypothetical protein 2417478..2417624 Ralstonia pickettii 12D 8019954 YP_002982237.1 CDS Rpic12D_2291 NC_012856.1 2417628 2417786 D hypothetical protein 2417628..2417786 Ralstonia pickettii 12D 8019955 YP_002982238.1 CDS Rpic12D_2292 NC_012856.1 2417786 2417977 D hypothetical protein 2417786..2417977 Ralstonia pickettii 12D 8019956 YP_002982239.1 CDS Rpic12D_2293 NC_012856.1 2417994 2418257 D KEGG: yps:YPTB1787 hypothetical protein; hypothetical protein 2417994..2418257 Ralstonia pickettii 12D 8019957 YP_002982240.1 CDS Rpic12D_2294 NC_012856.1 2418290 2419345 D KEGG: abn:AB57_2736 hypothetical protein; hypothetical protein 2418290..2419345 Ralstonia pickettii 12D 8019958 YP_002982241.1 CDS Rpic12D_2295 NC_012856.1 2419347 2420903 D KEGG: yps:YPTB1783 hypothetical protein; hypothetical protein 2419347..2420903 Ralstonia pickettii 12D 8019959 YP_002982242.1 CDS Rpic12D_2296 NC_012856.1 2420906 2421331 D hypothetical protein 2420906..2421331 Ralstonia pickettii 12D 8019960 YP_002982243.1 CDS Rpic12D_2297 NC_012856.1 2421341 2422444 D KEGG: bpd:BURPS668_A2385 hypothetical protein; hypothetical protein 2421341..2422444 Ralstonia pickettii 12D 8019961 YP_002982244.1 CDS Rpic12D_2298 NC_012856.1 2422441 2422683 D hypothetical protein 2422441..2422683 Ralstonia pickettii 12D 8019962 YP_002982245.1 CDS Rpic12D_2299 NC_012856.1 2422667 2423119 D KEGG: bpt:Bpet0944 hypothetical protein; hypothetical protein 2422667..2423119 Ralstonia pickettii 12D 8019963 YP_002982246.1 CDS Rpic12D_2300 NC_012856.1 2423116 2423277 D hypothetical protein 2423116..2423277 Ralstonia pickettii 12D 8019964 YP_002982247.1 CDS Rpic12D_2301 NC_012856.1 2423274 2423570 D hypothetical protein 2423274..2423570 Ralstonia pickettii 12D 8019965 YP_002982248.1 CDS Rpic12D_2302 NC_012856.1 2423563 2423766 D KEGG: bvi:Bcep1808_4502 hypothetical protein; hypothetical protein 2423563..2423766 Ralstonia pickettii 12D 8019966 YP_002982249.1 CDS Rpic12D_2303 NC_012856.1 2423753 2423926 D hypothetical protein 2423753..2423926 Ralstonia pickettii 12D 8019967 YP_002982250.1 CDS Rpic12D_2304 NC_012856.1 2424008 2424286 D KEGG: bmj:BMULJ_01382 hypothetical protein; hypothetical protein 2424008..2424286 Ralstonia pickettii 12D 8019968 YP_002982251.1 CDS Rpic12D_2305 NC_012856.1 2424551 2426410 D catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 2424551..2426410 Ralstonia pickettii 12D 8019969 YP_002982252.1 CDS dkgB NC_012856.1 2426494 2427300 R catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; 2,5-diketo-D-gluconate reductase B complement(2426494..2427300) Ralstonia pickettii 12D 8019970 YP_002982253.1 CDS Rpic12D_2307 NC_012856.1 2427325 2428527 R PFAM: major facilitator superfamily MFS_1; KEGG: bac:BamMC406_1146 major facilitator transporter; major facilitator superfamily protein complement(2427325..2428527) Ralstonia pickettii 12D 8019971 YP_002982254.1 CDS Rpic12D_2308 NC_012856.1 2428857 2429294 D PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rso:RSc2430 transcription regulator protein; MarR family transcriptional regulator 2428857..2429294 Ralstonia pickettii 12D 8019972 YP_002982255.1 CDS Rpic12D_2309 NC_012856.1 2429299 2431116 D PFAM: Chloride channel core; CBS domain containing protein; SMART: CBS domain containing protein; KEGG: rso:RSc2431 hypothetical protein; chloride channel core protein 2429299..2431116 Ralstonia pickettii 12D 8019973 YP_002982256.1 CDS Rpic12D_2310 NC_012856.1 2431119 2432786 R KEGG: rso:RSc2432 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(2431119..2432786) Ralstonia pickettii 12D 8019974 YP_002982257.1 CDS Rpic12D_2311 NC_012856.1 2432788 2433786 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: rso:RSc2433 oxidoreductase protein; NAD-dependent epimerase/dehydratase complement(2432788..2433786) Ralstonia pickettii 12D 8019975 YP_002982258.1 CDS Rpic12D_2312 NC_012856.1 2433870 2434919 D catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose; CDP-6-deoxy-delta-3,4-glucoseen reductase 2433870..2434919 Ralstonia pickettii 12D 8019976 YP_002982259.1 CDS argD NC_012856.1 2435191 2436378 D DapATase; functions in arginine biosynthetic pathway; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine transaminase protein 2435191..2436378 Ralstonia pickettii 12D 8019977 YP_002982260.1 CDS Rpic12D_2314 NC_012856.1 2436460 2436936 D PFAM: GCN5-related N-acetyltransferase; KEGG: rso:RSc2436 hypothetical protein; N-acetyltransferase GCN5 2436460..2436936 Ralstonia pickettii 12D 8019978 YP_002982261.1 CDS Rpic12D_2315 NC_012856.1 2437004 2437720 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RSc2437 amino acid ABC transporter ATP-binding protein; ABC transporter complement(2437004..2437720) Ralstonia pickettii 12D 8019979 YP_002982262.1 CDS Rpic12D_2316 NC_012856.1 2437737 2438513 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RSc2438 amino acid ABC transporter ATP-binding protein; ABC transporter complement(2437737..2438513) Ralstonia pickettii 12D 8019980 YP_002982263.1 CDS Rpic12D_2317 NC_012856.1 2438527 2439654 R PFAM: inner-membrane translocator; KEGG: rso:RSc2439 amino-acid transmembrane ABC transporter protein; inner-membrane translocator complement(2438527..2439654) Ralstonia pickettii 12D 8019981 YP_002982264.1 CDS Rpic12D_2318 NC_012856.1 2439668 2440603 R PFAM: inner-membrane translocator; KEGG: rso:RSc2440 amino-acid transmembrane ABC transporter protein; inner-membrane translocator complement(2439668..2440603) Ralstonia pickettii 12D 8019982 YP_002982265.1 CDS Rpic12D_2319 NC_012856.1 2440814 2442019 R PFAM: extracellular ligand-binding receptor; KEGG: rme:Rmet_2867 extracellular ligand-binding receptor; extracellular ligand-binding receptor complement(2440814..2442019) Ralstonia pickettii 12D 8019983 YP_002982266.1 CDS ispH NC_012856.1 2442473 2443456 R catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase complement(2442473..2443456) Ralstonia pickettii 12D 8019984 YP_002982267.1 CDS Rpic12D_2321 NC_012856.1 2443458 2443946 R PFAM: peptidylprolyl isomerase FKBP-type; KEGG: rso:RSc2443 FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase protein; FKBP-type peptidylprolyl isomerase complement(2443458..2443946) Ralstonia pickettii 12D 8019985 YP_002982268.1 CDS radC NC_012856.1 2444065 2444739 D Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 2444065..2444739 Ralstonia pickettii 12D 8019986 YP_002982269.1 CDS rpmB NC_012856.1 2444920 2445153 D required for 70S ribosome assembly; 50S ribosomal protein L28 2444920..2445153 Ralstonia pickettii 12D 8019987 YP_002982270.1 CDS rpmG NC_012856.1 2445167 2445337 D in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 2445167..2445337 Ralstonia pickettii 12D 8019988 YP_002982271.1 CDS Rpic12D_2325 NC_012856.1 2445516 2447117 D catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 2445516..2447117 Ralstonia pickettii 12D 8019989 YP_002982272.1 CDS Rpic12D_2326 NC_012856.1 2447125 2448024 R catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; nicotinate-nucleotide pyrophosphorylase complement(2447125..2448024) Ralstonia pickettii 12D 8019990 YP_002982273.1 CDS Rpic12D_2327 NC_012856.1 2448021 2449169 R 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase complement(2448021..2449169) Ralstonia pickettii 12D 8019991 YP_002982274.1 CDS Rpic12D_2328 NC_012856.1 2449357 2450547 R PFAM: fatty acid desaturase; KEGG: rso:RSc2450 stearoyl-CoA desaturase oxidoreductase protein; fatty acid desaturase complement(2449357..2450547) Ralstonia pickettii 12D 8019992 YP_002982275.1 CDS Rpic12D_2329 NC_012856.1 2450609 2450737 D hypothetical protein 2450609..2450737 Ralstonia pickettii 12D 8019993 YP_002982276.1 CDS Rpic12D_2330 NC_012856.1 2450920 2452296 R PFAM: MscS Mechanosensitive ion channel; KEGG: rso:RSc2451 hypothetical protein; mechanosensitive ion channel MscS complement(2450920..2452296) Ralstonia pickettii 12D 8019994 YP_002982277.1 CDS Rpic12D_2331 NC_012856.1 2452322 2452891 R KEGG: rso:RSc2452 endonuclease protein; endonuclease protein complement(2452322..2452891) Ralstonia pickettii 12D 8019995 YP_002982278.1 CDS Rpic12D_2332 NC_012856.1 2452888 2454285 R PFAM: Fmu (Sun) domain protein; KEGG: rso:RSc2453 hypothetical protein; Fmu (Sun) domain-containing protein complement(2452888..2454285) Ralstonia pickettii 12D 8019996 YP_002982279.1 CDS purN NC_012856.1 2454282 2454932 R glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase complement(2454282..2454932) Ralstonia pickettii 12D 8019997 YP_002982280.1 CDS Rpic12D_2334 NC_012856.1 2455335 2456000 D PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; response regulator receiver; SMART: regulatory protein LuxR; response regulator receiver; KEGG: rso:RSc2455 response regulator VSRC transcription regulator protein; two component LuxR family transcriptional regulator 2455335..2456000 Ralstonia pickettii 12D 8019998 YP_002982281.1 CDS Rpic12D_2335 NC_012856.1 2456067 2457899 R PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; KEGG: rso:RSc2456 composite two-component regulatory (sensor kinase and response regulator hybrid) transcription regulator protein; histidine kinase complement(2456067..2457899) Ralstonia pickettii 12D 8019999 YP_002982282.1 CDS Rpic12D_2336 NC_012856.1 2458120 2459118 D catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 2458120..2459118 Ralstonia pickettii 12D 8020000 YP_002982283.1 CDS ileS NC_012856.1 2459228 2462107 D IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 2459228..2462107 Ralstonia pickettii 12D 8020001 YP_002982284.1 CDS lspA NC_012856.1 2462107 2462631 D lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 2462107..2462631 Ralstonia pickettii 12D 8020002 YP_002982285.1 CDS Rpic12D_2339 NC_012856.1 2463016 2463588 R PFAM: protein of unknown function DUF218; KEGG: rso:RSc2460 transmembrane protein; hypothetical protein complement(2463016..2463588) Ralstonia pickettii 12D 8020003 YP_002982286.1 CDS Rpic12D_2340 NC_012856.1 2463738 2464943 D catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 2463738..2464943 Ralstonia pickettii 12D 8020004 YP_002982287.1 CDS Rpic12D_2341 NC_012856.1 2464940 2465986 D PFAM: Luciferase-like monooxygenase; KEGG: rso:RSc2462 hypothetical protein; luciferase-like monooxygenase 2464940..2465986 Ralstonia pickettii 12D 8020005 YP_002982288.1 CDS dut NC_012856.1 2465983 2466429 D catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 2465983..2466429 Ralstonia pickettii 12D 8020006 YP_002982289.1 CDS Rpic12D_2343 NC_012856.1 2466498 2468786 R KEGG: rso:RSc2464 ATP-dependent protease ATP-binding specificity subunit; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: ATPase AAA-2 domain protein; ATPase AAA; Torsin; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding protein ClpA complement(2466498..2468786) Ralstonia pickettii 12D 8020007 YP_002982290.1 CDS clpS NC_012856.1 2468783 2469109 R involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS complement(2468783..2469109) Ralstonia pickettii 12D 8020008 YP_002982291.1 CDS Rpic12D_2345 NC_012856.1 2469687 2469890 D PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: rso:RSc2466 cold shock-like transcription regulator protein; cold-shock DNA-binding domain-containing protein 2469687..2469890 Ralstonia pickettii 12D 8020009 YP_002982292.1 CDS Rpic12D_2347 NC_012856.1 2470240 2470860 D KEGG: rso:RSc2467 hypothetical protein; hypothetical protein 2470240..2470860 Ralstonia pickettii 12D 8020011 YP_002982293.1 CDS Rpic12D_2348 NC_012856.1 2471217 2471411 D hypothetical protein 2471217..2471411 Ralstonia pickettii 12D 8020012 YP_002982294.1 CDS Rpic12D_2349 NC_012856.1 2471631 2472881 R Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase complement(2471631..2472881) Ralstonia pickettii 12D 8020013 YP_002982295.1 CDS Rpic12D_2350 NC_012856.1 2473141 2473455 R hypothetical protein complement(2473141..2473455) Ralstonia pickettii 12D 8020014 YP_002982296.1 CDS Rpic12D_2351 NC_012856.1 2473902 2474111 D KEGG: rso:RSc2491 signal peptide protein; signal peptide protein 2473902..2474111 Ralstonia pickettii 12D 8020015 YP_002982297.1 CDS Rpic12D_2352 NC_012856.1 2474312 2475811 D PFAM: metallophosphoesterase; KEGG: rso:RSc2492 hypothetical protein; metallophosphoesterase 2474312..2475811 Ralstonia pickettii 12D 8020016 YP_002982298.1 CDS Rpic12D_2353 NC_012856.1 2475808 2477148 D PFAM: Di-haem cytochrome C peroxidase; KEGG: rso:RSc2493 signal peptide protein; Di-heme cytochrome C peroxidase 2475808..2477148 Ralstonia pickettii 12D 8020017 YP_002982299.1 CDS Rpic12D_2354 NC_012856.1 2477239 2477700 D PFAM: protein of unknown function DUF192; KEGG: rso:RSc2494 signal peptide protein; hypothetical protein 2477239..2477700 Ralstonia pickettii 12D 8020018 YP_002982300.1 CDS Rpic12D_2355 NC_012856.1 2477739 2478698 D PFAM: beta-lactamase domain protein; KEGG: rso:RSc2495 hydrolase protein; beta-lactamase domain-containing protein 2477739..2478698 Ralstonia pickettii 12D 8020019 YP_002982301.1 CDS Rpic12D_2356 NC_012856.1 2478695 2479162 R KEGG: rso:RSc2496 signal peptide protein; signal peptide protein complement(2478695..2479162) Ralstonia pickettii 12D 8020020 YP_002982302.1 CDS Rpic12D_2357 NC_012856.1 2479196 2480161 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RSc2497 transcription regulator protein; LysR family transcriptional regulator complement(2479196..2480161) Ralstonia pickettii 12D 8020021 YP_002982303.1 CDS Rpic12D_2358 NC_012856.1 2480226 2481134 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RSc2498 transcription regulator protein; LysR family transcriptional regulator complement(2480226..2481134) Ralstonia pickettii 12D 8020022 YP_002982304.1 CDS Rpic12D_2359 NC_012856.1 2481196 2482764 D PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc2499 multidrug resistance protein; major facilitator superfamily protein 2481196..2482764 Ralstonia pickettii 12D 8020023 YP_002982305.1 CDS Rpic12D_2360 NC_012856.1 2482774 2483184 R PFAM: DoxX family protein; KEGG: rso:RSc2500 hypothetical protein; DoxX family protein complement(2482774..2483184) Ralstonia pickettii 12D 8020024 YP_002982306.1 CDS Rpic12D_2361 NC_012856.1 2483219 2484103 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cti:RALTA_A2268 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(2483219..2484103) Ralstonia pickettii 12D 8020025 YP_002982307.1 CDS Rpic12D_2362 NC_012856.1 2484227 2485855 D PFAM: gamma-glutamyltranspeptidase; KEGG: rso:RSc2501 gamma-glutamyltranspeptidase protein; gamma-glutamyltransferase 2484227..2485855 Ralstonia pickettii 12D 8020026 YP_002982308.1 CDS Rpic12D_2363 NC_012856.1 2485958 2487274 D PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: bpy:Bphyt_3314 major facilitator superfamily MFS_1; major facilitator superfamily protein 2485958..2487274 Ralstonia pickettii 12D 8020027 YP_002982309.1 CDS Rpic12D_2364 NC_012856.1 2487402 2487749 D KEGG: bpy:Bphyt_5964 hypothetical protein; hypothetical protein 2487402..2487749 Ralstonia pickettii 12D 8020028 YP_002982310.1 CDS Rpic12D_2365 NC_012856.1 2487758 2488642 D TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; KEGG: bxe:Bxe_B0029 dihydrodipicolinate synthase; dihydrodipicolinate synthase 2487758..2488642 Ralstonia pickettii 12D 8020029 YP_002982311.1 CDS Rpic12D_2366 NC_012856.1 2488659 2489252 R KEGG: rso:RSc2502 hypothetical protein; hypothetical protein complement(2488659..2489252) Ralstonia pickettii 12D 8020030 YP_002982312.1 CDS Rpic12D_2367 NC_012856.1 2489569 2490453 D PFAM: protein of unknown function zinc metallopeptidase KEGG: rso:RSc2503 hypothetical protein; hypothetical protein 2489569..2490453 Ralstonia pickettii 12D 8020031 YP_002982313.1 CDS Rpic12D_2368 NC_012856.1 2490462 2491208 R Converts glucose to D-glucono-1,5 lactone; glucose-1-dehydrogenase complement(2490462..2491208) Ralstonia pickettii 12D 8020032 YP_002982314.1 CDS Rpic12D_2369 NC_012856.1 2491346 2492821 D PFAM: AlkA domain protein; Ada metal-binding domain protein; HhH-GPD family protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; HhH-GPD family protein; KEGG: rso:RSc2505 transcription regulator protein; AraC family transcriptional regulator 2491346..2492821 Ralstonia pickettii 12D 8020033 YP_002982315.1 CDS Rpic12D_2370 NC_012856.1 2492835 2493383 D TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylguanine DNA methyltransferase ribonuclease domain protein; KEGG: rso:RSc2506 methylated-DNA--protein-cysteine methyltransferase; methylated-DNA--protein-cysteine methyltransferase 2492835..2493383 Ralstonia pickettii 12D 8020034 YP_002982316.1 CDS Rpic12D_2371 NC_012856.1 2493442 2494374 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RSc2507 hypothetical protein; hypothetical protein 2493442..2494374 Ralstonia pickettii 12D 8020035 YP_002982317.1 CDS Rpic12D_2372 NC_012856.1 2494876 2496186 D PFAM: HipA domain protein; KEGG: rso:RSc2508 hypothetical protein; HipA domain-containing protein 2494876..2496186 Ralstonia pickettii 12D 8020036 YP_002982318.1 CDS Rpic12D_2373 NC_012856.1 2496215 2496490 R KEGG: rso:RSc2509 hypothetical protein; hypothetical protein complement(2496215..2496490) Ralstonia pickettii 12D 8020037 YP_002982319.1 CDS Rpic12D_2374 NC_012856.1 2496724 2498136 D KEGG: ccr:CC_2809 M20/M25/M40 family peptidase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 2496724..2498136 Ralstonia pickettii 12D 8020038 YP_002982320.1 CDS Rpic12D_2375 NC_012856.1 2498212 2499027 D KEGG: rso:RSc2512 cyclohexadienyl dehydratase precursor signal peptide protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; arogenate dehydratase 2498212..2499027 Ralstonia pickettii 12D 8020039 YP_002982321.1 CDS Rpic12D_2376 NC_012856.1 2499259 2500065 R KEGG: rso:RSc2513 hypothetical protein; hypothetical protein complement(2499259..2500065) Ralstonia pickettii 12D 8020040 YP_002982322.1 CDS Rpic12D_2377 NC_012856.1 2500474 2500746 D KEGG: rso:RSc2514 signal peptide protein; signal peptide protein 2500474..2500746 Ralstonia pickettii 12D 8020041 YP_002982323.1 CDS Rpic12D_2378 NC_012856.1 2501024 2502232 D PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: rso:RSc2515 hypothetical protein; metal dependent phosphohydrolase 2501024..2502232 Ralstonia pickettii 12D 8020042 YP_002982324.1 CDS Rpic12D_2379 NC_012856.1 2502214 2503770 D PFAM: Substrate-binding region of ABC-type glycine betaine transport system; binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc2516 lipoprotein transmembrane; glycine/betaine ABC transporter substrate-binding protein 2502214..2503770 Ralstonia pickettii 12D 8020043 YP_002982325.1 CDS Rpic12D_2380 NC_012856.1 2503836 2504603 D PFAM: protein of unknown function DUF81; KEGG: rso:RSc2517 hypothetical protein; hypothetical protein 2503836..2504603 Ralstonia pickettii 12D 8020044 YP_002982326.1 CDS Rpic12D_2381 NC_012856.1 2504771 2505220 D hypothetical protein 2504771..2505220 Ralstonia pickettii 12D 8020045 YP_002982327.1 CDS Rpic12D_2382 NC_012856.1 2505287 2506687 R PFAM: citrate transporter; KEGG: rso:RSc2518 hypothetical protein; citrate transporter complement(2505287..2506687) Ralstonia pickettii 12D 8020046 YP_002982328.1 CDS Rpic12D_2383 NC_012856.1 2506840 2507199 R KEGG: rso:RSc2519 hypothetical protein; hypothetical protein complement(2506840..2507199) Ralstonia pickettii 12D 8020047 YP_002982329.1 CDS Rpic12D_2384 NC_012856.1 2507380 2508711 D PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: cti:RALTA_A3008 proline/glycine betaine transporter, major facilitator superfamily; major facilitator superfamily protein 2507380..2508711 Ralstonia pickettii 12D 8020048 YP_002982330.1 CDS Rpic12D_2385 NC_012856.1 2508761 2509513 R PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KEGG: rso:RSc2520 hypothetical protein; NAD-dependent epimerase/dehydratase complement(2508761..2509513) Ralstonia pickettii 12D 8020049 YP_002982331.1 CDS Rpic12D_2386 NC_012856.1 2509825 2510109 D PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: rso:RSc2521 DNA-binding protein HU-beta; histone family protein DNA-binding protein 2509825..2510109 Ralstonia pickettii 12D 8020050 YP_002982332.1 CDS Rpic12D_2387 NC_012856.1 2510207 2510785 R PFAM: protein of unknown function DUF886; KEGG: rso:RSc2522 hypothetical protein; hypothetical protein complement(2510207..2510785) Ralstonia pickettii 12D 8020051 YP_002982333.1 CDS Rpic12D_2388 NC_012856.1 2510782 2511729 R catalyzes the formation of glutamate and formamide from N-formimidoyl-L-glutamate; formimidoylglutamase complement(2510782..2511729) Ralstonia pickettii 12D 8020052 YP_002982334.1 CDS Rpic12D_2389 NC_012856.1 2511726 2512526 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: reh:H16_A0045 ABC-type transporter, ATPase component: PAAT family; ABC transporter complement(2511726..2512526) Ralstonia pickettii 12D 8020053 YP_002982335.1 CDS Rpic12D_2390 NC_012856.1 2512523 2513191 R TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: reh:H16_A0046 ABC-type transporter, permease component: PAAT family; polar amino acid ABC transporter permease complement(2512523..2513191) Ralstonia pickettii 12D 8020054 YP_002982336.1 CDS Rpic12D_2391 NC_012856.1 2513207 2513971 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: reh:H16_A0047 ABC-type transporter, periplasmic component: PAAT family; family 3 extracellular solute-binding protein complement(2513207..2513971) Ralstonia pickettii 12D 8020055 YP_002982337.1 CDS Rpic12D_2392 NC_012856.1 2514034 2514804 R PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: cti:RALTA_A0014 transcriptional regulator, IclR family; IclR family transcriptional regulator complement(2514034..2514804) Ralstonia pickettii 12D 8020056 YP_002982338.1 CDS Rpic12D_2393 NC_012856.1 2514901 2515428 R KEGG: cti:RALTA_A1610 hypothetical protein; hypothetical protein complement(2514901..2515428) Ralstonia pickettii 12D 8020057 YP_002982339.1 CDS Rpic12D_2394 NC_012856.1 2515682 2516224 D PFAM: protein of unknown function DUF1486; KEGG: bpy:Bphyt_1261 protein of unknown function DUF1486; hypothetical protein 2515682..2516224 Ralstonia pickettii 12D 8020058 YP_002982340.1 CDS Rpic12D_2396 NC_012856.1 2517302 2518021 D PFAM: peptidase M50; KEGG: rso:RSc2524 hypothetical protein; peptidase M50 2517302..2518021 Ralstonia pickettii 12D 8020060 YP_002982341.1 CDS Rpic12D_2397 NC_012856.1 2518073 2518774 R PFAM: manganese and iron superoxide dismutase; KEGG: rso:RSc2526 superoxide dismutase [Fe] protein; superoxide dismutase complement(2518073..2518774) Ralstonia pickettii 12D 8020061 YP_002982342.1 CDS xseA NC_012856.1 2518799 2520202 R bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit complement(2518799..2520202) Ralstonia pickettii 12D 8020062 YP_002982343.1 CDS Rpic12D_2399 NC_012856.1 2521272 2521892 D PFAM: MotA/TolQ/ExbB proton channel; KEGG: rso:RSc2528 biopolymer transport ExbB-like transmembrane protein; MotA/TolQ/ExbB proton channel 2521272..2521892 Ralstonia pickettii 12D 8020063 YP_002982344.1 CDS Rpic12D_2400 NC_012856.1 2521921 2522349 D PFAM: Biopolymer transport protein ExbD/TolR; KEGG: rso:RSc2529 biopolymer transport ExbD-like transmembrane protein; biopolymer transport protein ExbD/TolR 2521921..2522349 Ralstonia pickettii 12D 8020064 YP_002982345.1 CDS Rpic12D_2401 NC_012856.1 2522377 2523426 D Transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 2522377..2523426 Ralstonia pickettii 12D 8020065 YP_002982346.1 CDS Rpic12D_2402 NC_012856.1 2523495 2523683 D PFAM: protein of unknown function DUF343; KEGG: rso:RSc2531 hypothetical protein; hypothetical protein 2523495..2523683 Ralstonia pickettii 12D 8020066 YP_002982347.1 CDS Rpic12D_2403 NC_012856.1 2523700 2524506 D CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 2523700..2524506 Ralstonia pickettii 12D 8020067 YP_002982348.1 CDS adk NC_012856.1 2524853 2525521 D essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 2524853..2525521 Ralstonia pickettii 12D 8020068 YP_002982349.1 CDS Rpic12D_2405 NC_012856.1 2525674 2526432 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rso:RSc2534 3-hydroxyacyl-CoA dehydrogenase type II oxidoreductase protein; short-chain dehydrogenase/reductase SDR 2525674..2526432 Ralstonia pickettii 12D 8020069 YP_002982350.1 CDS Rpic12D_2406 NC_012856.1 2526447 2527343 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RSc2537 transcription regulator transcription regulator protein; LysR family transcriptional regulator complement(2526447..2527343) Ralstonia pickettii 12D 8020070 YP_002982351.1 CDS Rpic12D_2407 NC_012856.1 2527462 2528493 D PFAM: bile acid:sodium symporter; KEGG: rso:RSc2538 lipoprotein transmembrane; bile acid:sodium symporter 2527462..2528493 Ralstonia pickettii 12D 8020071 YP_002982352.1 CDS Rpic12D_2408 NC_012856.1 2528494 2529039 R PFAM: GCN5-related N-acetyltransferase; KEGG: bph:Bphy_0720 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(2528494..2529039) Ralstonia pickettii 12D 8020072 YP_002982353.1 CDS Rpic12D_2409 NC_012856.1 2529043 2530566 R KEGG: rso:RSc2539 N-acetylmuramoyl-L-alanine amidase AmiC precursor protein; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; N-acetylmuramoyl-L-alanine amidase complement(2529043..2530566) Ralstonia pickettii 12D 8020073 YP_002982354.1 CDS Rpic12D_2410 NC_012856.1 2530560 2531138 R PFAM: protein of unknown function UPF0079; KEGG: rso:RSc2540 hypothetical protein; hypothetical protein complement(2530560..2531138) Ralstonia pickettii 12D 8020074 YP_002982355.1 CDS Rpic12D_2411 NC_012856.1 2531155 2532306 D TIGRFAM: iron-sulfur cluster binding protein; PFAM: domain of unknown function DUF1730; KEGG: rso:RSc2541 iron-sulfur 4Fe-4S ferredoxin protein; iron-sulfur cluster binding protein 2531155..2532306 Ralstonia pickettii 12D 8020075 YP_002982356.1 CDS Rpic12D_2412 NC_012856.1 2532567 2533217 D KEGG: rso:RSc2542 lipoprotein transmembrane; lipoprotein transmembrane 2532567..2533217 Ralstonia pickettii 12D 8020076 YP_002982357.1 CDS Rpic12D_2413 NC_012856.1 2533340 2534317 D PFAM: conserved hypothetical protein; KEGG: reu:Reut_A0579 hypothetical protein; hypothetical protein 2533340..2534317 Ralstonia pickettii 12D 8020077 YP_002982358.1 CDS Rpic12D_2414 NC_012856.1 2534379 2534855 D TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: rso:RSc2543 methylated-DNA--protein-cysteine methyltransferase; methylated-DNA--protein-cysteine methyltransferase 2534379..2534855 Ralstonia pickettii 12D 8020078 YP_002982359.1 CDS xerD NC_012856.1 2534891 2535787 D site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD 2534891..2535787 Ralstonia pickettii 12D 8020079 YP_002982360.1 CDS Rpic12D_2416 NC_012856.1 2535810 2536301 D TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: rso:RSc2545 hypothetical protein; ybaK/ebsC protein 2535810..2536301 Ralstonia pickettii 12D 8020080 YP_002982361.1 CDS Rpic12D_2417 NC_012856.1 2536372 2536995 D involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; glycerol-3-phosphate acyltransferase PlsY 2536372..2536995 Ralstonia pickettii 12D 8020081 YP_002982362.1 CDS Rpic12D_2418 NC_012856.1 2536992 2538008 R PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: cvi:CV_2101 AraC family transcriptional regulator; AraC family transcriptional regulator complement(2536992..2538008) Ralstonia pickettii 12D 8020082 YP_002982363.1 CDS Rpic12D_2419 NC_012856.1 2538169 2540556 D PFAM: peptidase S45 penicillin amidase; KEGG: rso:RSc2547 aculeacin A acylase transmembrane protein; peptidase S45 penicillin amidase 2538169..2540556 Ralstonia pickettii 12D 8020083 YP_002982364.1 CDS Rpic12D_2420 NC_012856.1 2540630 2541115 R nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; nucleotide-binding protein complement(2540630..2541115) Ralstonia pickettii 12D 8020084 YP_002982365.1 CDS murB NC_012856.1 2541222 2542250 D catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 2541222..2542250 Ralstonia pickettii 12D 8020085 YP_002982366.1 CDS Rpic12D_2422 NC_012856.1 2542399 2542716 D PFAM: protein of unknown function DUF1255; KEGG: rso:RSc2552 hypothetical protein; hypothetical protein 2542399..2542716 Ralstonia pickettii 12D 8020086 YP_002982367.1 CDS Rpic12D_2423 NC_012856.1 2542869 2544206 D catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis; argininosuccinate synthase 2542869..2544206 Ralstonia pickettii 12D 8020087 YP_002982368.1 CDS Rpic12D_2424 NC_012856.1 2544293 2545219 R catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase complement(2544293..2545219) Ralstonia pickettii 12D 8020088 YP_002982369.1 CDS Rpic12D_2425 NC_012856.1 2545588 2545911 D KEGG: rso:RSc2555 hypothetical protein; hypothetical protein 2545588..2545911 Ralstonia pickettii 12D 8020089 YP_002982370.1 CDS rpsT NC_012856.1 2546055 2546321 R binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 complement(2546055..2546321) Ralstonia pickettii 12D 8020090 YP_002982371.1 CDS Rpic12D_2427 NC_012856.1 2546598 2548190 D TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: rso:RSc2557 MVIN_ECOLI homolog transmembrane protein; integral membrane protein MviN 2546598..2548190 Ralstonia pickettii 12D 8020091 YP_002982372.1 CDS Rpic12D_2428 NC_012856.1 2548190 2549035 D KEGG: rso:RSc2558 hypothetical protein; hypothetical protein 2548190..2549035 Ralstonia pickettii 12D 8020092 YP_002982373.1 CDS Rpic12D_2429 NC_012856.1 2549039 2549686 R PFAM: SNARE associated Golgi protein; KEGG: rso:RSc2559 DedA DSG-1 protein transmembrane; hypothetical protein complement(2549039..2549686) Ralstonia pickettii 12D 8020093 YP_002982374.1 CDS mutL NC_012856.1 2549812 2551719 D This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 2549812..2551719 Ralstonia pickettii 12D 8020094 YP_002982375.1 CDS miaA NC_012856.1 2551726 2552703 D IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 2551726..2552703 Ralstonia pickettii 12D 8020095 YP_002982376.1 CDS Rpic12D_2432 NC_012856.1 2552700 2553230 D PFAM: GCN5-related N-acetyltransferase; KEGG: rso:RSc2565 acetyltransferase protein; N-acetyltransferase GCN5 2552700..2553230 Ralstonia pickettii 12D 8020096 YP_002982377.1 CDS Rpic12D_2433 NC_012856.1 2553311 2554051 D KEGG: rso:RSc2567 hypothetical protein; hypothetical protein 2553311..2554051 Ralstonia pickettii 12D 8020097 YP_002982378.1 CDS Rpic12D_2434 NC_012856.1 2554062 2554718 D PFAM: 2OG-Fe(II) oxygenase; KEGG: rso:RSc2568 alkylated DNA repair protein; 2OG-Fe(II) oxygenase 2554062..2554718 Ralstonia pickettii 12D 8020098 YP_002982379.1 CDS Rpic12D_2435 NC_012856.1 2554734 2555384 D KEGG: rso:RSc2569 DNA-3-methyladenine glycosylase protein; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein; DNA-3-methyladenine glycosylase II 2554734..2555384 Ralstonia pickettii 12D 8020099 YP_002982380.1 CDS Rpic12D_2436 NC_012856.1 2555440 2555706 D TIGRFAM: periplasmic nitrate reductase, NapE protein; PFAM: periplasmic nitrate reductase NapE; KEGG: cti:RALTA_B0653 periplasmic nitrate reductase accessory protein; periplasmic nitrate reductase, NapE protein 2555440..2555706 Ralstonia pickettii 12D 8020100 YP_002982381.1 CDS Rpic12D_2437 NC_012856.1 2555795 2556139 D PFAM: NapD family protein; KEGG: reh:PHG210 periplasmic nitrate reductase accessory protein; NapD family protein 2555795..2556139 Ralstonia pickettii 12D 8020101 YP_002982382.1 CDS Rpic12D_2438 NC_012856.1 2556111 2558630 D periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; nitrate reductase catalytic subunit 2556111..2558630 Ralstonia pickettii 12D 8020102 YP_002982383.1 CDS Rpic12D_2439 NC_012856.1 2558671 2559174 D PFAM: nitrate reductase cytochrome C-type subunit (NapB); KEGG: reu:Reut_B4764 periplasmic nitrate reductase subunit NapB; nitrate reductase cytochrome c-type subunit (NapB) 2558671..2559174 Ralstonia pickettii 12D 8020103 YP_002982384.1 CDS Rpic12D_2440 NC_012856.1 2559187 2559774 D TIGRFAM: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family; PFAM: NapC/NirT cytochrome C domain protein; KEGG: cti:RALTA_B0649 nitrate reductase, cytochrome C-type protein; periplasmic nitrate (or nitrite) reductase c-type cytochrome 2559187..2559774 Ralstonia pickettii 12D 8020104 YP_002982385.1 CDS Rpic12D_2441 NC_012856.1 2559829 2560461 D KEGG: reh:PHG214 ABC heme export system atp-binding protein; TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter; SMART: AAA ATPase; heme exporter protein CcmA 2559829..2560461 Ralstonia pickettii 12D 8020105 YP_002982386.1 CDS Rpic12D_2442 NC_012856.1 2560458 2561126 D TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome C-type biogenesis protein CcmB; KEGG: reu:Reut_B4767 cytochrome C-type biogenesis protein CcmB; heme exporter protein CcmB 2560458..2561126 Ralstonia pickettii 12D 8020106 YP_002982387.1 CDS Rpic12D_2443 NC_012856.1 2561131 2561916 D TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome C assembly protein; KEGG: cti:RALTA_B0646 ABC transporter, heme transfer protein, cytochrome C-type biogenesis; heme exporter protein CcmC 2561131..2561916 Ralstonia pickettii 12D 8020107 YP_002982388.1 CDS Rpic12D_2444 NC_012856.1 2561913 2562062 D hypothetical protein 2561913..2562062 Ralstonia pickettii 12D 8020108 YP_002982389.1 CDS Rpic12D_2445 NC_012856.1 2562059 2562529 D CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome C maturation system; periplasmic protein anchored to the inner membrane; cytochrome C-type biogenesis protein CcmE 2562059..2562529 Ralstonia pickettii 12D 8020109 YP_002982390.1 CDS Rpic12D_2446 NC_012856.1 2562526 2564544 D TIGRFAM: cytochrome C-type biogenesis protein CcmF; PFAM: cytochrome C assembly protein; KEGG: reh:PHG218 cytochrome C-type biogenesis protein; cytochrome C-type biogenesis protein CcmF 2562526..2564544 Ralstonia pickettii 12D 8020110 YP_002982391.1 CDS Rpic12D_2447 NC_012856.1 2564541 2565083 D TIGRFAM: periplasmic protein thiol/disulphide oxidoreductase DsbE; PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: reh:PHG219 cytochrome C-type biogenesis protein; protein thiol/disulfide oxidoreductase DsbE 2564541..2565083 Ralstonia pickettii 12D 8020111 YP_002982392.1 CDS Rpic12D_2448 NC_012856.1 2565076 2565546 D PFAM: cytochrome C biogenesis protein; KEGG: reh:PHG220 cytochrome C-type biogenesis protein; cytochrome C biogenesis protein 2565076..2565546 Ralstonia pickettii 12D 8020112 YP_002982393.1 CDS Rpic12D_2449 NC_012856.1 2565543 2566442 D KEGG: cti:RALTA_B0640 cytochrome C-type biogenesis protein; TIGRFAM: cytochrome C-type biogenesis protein CcmI; PFAM: Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; cytochrome C-type biogenesis protein CcmI 2565543..2566442 Ralstonia pickettii 12D 8020113 YP_002982394.1 CDS Rpic12D_2450 NC_012856.1 2566538 2567623 D KEGG: rso:RSc2570 bifunctional methylated-DNA--protein-cysteine methyltransferase/O-6-methylguanine-DNA transcription regulator; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; Ada metal-binding domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; AraC family transcriptional regulator 2566538..2567623 Ralstonia pickettii 12D 8020114 YP_002982395.1 CDS Rpic12D_2451 NC_012856.1 2567932 2568381 D KEGG: rso:RSc2572 lipoprotein; lipoprotein 2567932..2568381 Ralstonia pickettii 12D 8020115 YP_002982396.1 CDS Rpic12D_2452 NC_012856.1 2568455 2569510 R catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase complement(2568455..2569510) Ralstonia pickettii 12D 8020116 YP_002982397.1 CDS Rpic12D_2453 NC_012856.1 2569674 2570744 D PFAM: protein of unknown function UPF0118; KEGG: rso:RSc2624 ABC transporter permease; hypothetical protein 2569674..2570744 Ralstonia pickettii 12D 8020117 YP_002982398.1 CDS Rpic12D_2454 NC_012856.1 2570803 2571504 D TIGRFAM: DnaA regulatory inactivator Hda; KEGG: rso:RSc2625 hypothetical protein; DnaA regulatory inactivator Hda 2570803..2571504 Ralstonia pickettii 12D 8020118 YP_002982399.1 CDS Rpic12D_2455 NC_012856.1 2571556 2572230 D TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase, subfamily IB (PSPase-like); KEGG: rso:RSc2626 hydrolase protein; HAD-superfamily hydrolase 2571556..2572230 Ralstonia pickettii 12D 8020119 YP_002982400.1 CDS Rpic12D_2456 NC_012856.1 2572243 2573805 D KEGG: rso:RSc2627 polynucleotide adenylyltransferase protein; TIGRFAM: poly(A) polymerase; PFAM: Polynucleotide adenylyltransferase region; poly(A) polymerase 2572243..2573805 Ralstonia pickettii 12D 8020120 YP_002982401.1 CDS Rpic12D_2457 NC_012856.1 2573802 2574317 D KEGG: rso:RSc2628 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 2573802..2574317 Ralstonia pickettii 12D 8020121 YP_002982402.1 CDS Rpic12D_2458 NC_012856.1 2574346 2574990 D PFAM: deoxynucleoside kinase; KEGG: rso:RSc2629 deoxyguanosine kinase (dGuo kinase) (DGK) protein; deoxynucleoside kinase 2574346..2574990 Ralstonia pickettii 12D 8020122 YP_002982403.1 CDS panB NC_012856.1 2575047 2575865 D catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 2575047..2575865 Ralstonia pickettii 12D 8020123 YP_002982404.1 CDS Rpic12D_2460 NC_012856.1 2575877 2576584 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc2631 transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein 2575877..2576584 Ralstonia pickettii 12D 8020124 YP_002982405.1 CDS Rpic12D_2461 NC_012856.1 2576581 2577279 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RSc2632 ABC transporter ATP-binding protein; ABC transporter 2576581..2577279 Ralstonia pickettii 12D 8020125 YP_002982406.1 CDS Rpic12D_2462 NC_012856.1 2577223 2579121 R TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding-like; aminotransferase class IV; KEGG: rso:RSc2633 para-aminobenzoate synthetase component I protein; para-aminobenzoate synthase subunit I complement(2577223..2579121) Ralstonia pickettii 12D 8020126 YP_002982407.1 CDS Rpic12D_2463 NC_012856.1 2579271 2580419 R chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ complement(2579271..2580419) Ralstonia pickettii 12D 8020127 YP_002982408.1 CDS dnaK NC_012856.1 2580555 2582510 R heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK complement(2580555..2582510) Ralstonia pickettii 12D 8020128 YP_002982409.1 CDS Rpic12D_2465 NC_012856.1 2582775 2584070 D PFAM: phospholipase A1; KEGG: reh:H16_A1139 outer membrane phospholipase A; phospholipase A1 2582775..2584070 Ralstonia pickettii 12D 8020129 YP_002982410.1 CDS Rpic12D_2466 NC_012856.1 2584083 2584490 R PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: rso:RSc2636 regulator of nucleoside diphosphate kinase transcription regulator protein; GreA/GreB family elongation factor complement(2584083..2584490) Ralstonia pickettii 12D 8020130 YP_002982411.1 CDS Rpic12D_2467 NC_012856.1 2584821 2585246 R KEGG: rso:RSc2638 thioredoxin protein; thioredoxin protein complement(2584821..2585246) Ralstonia pickettii 12D 8020131 YP_002982412.1 CDS Rpic12D_2468 NC_012856.1 2585261 2585908 R with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE complement(2585261..2585908) Ralstonia pickettii 12D 8020132 YP_002982413.1 CDS Rpic12D_2469 NC_012856.1 2586171 2586368 D KEGG: rso:RSc2641 transmembrane protein; hypothetical protein 2586171..2586368 Ralstonia pickettii 12D 8020133 YP_002982414.1 CDS Rpic12D_2470 NC_012856.1 2586390 2586788 R PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: rso:RSc2642 heat shock protein 15; RNA-binding S4 domain-containing protein complement(2586390..2586788) Ralstonia pickettii 12D 8020134 YP_002982415.1 CDS hemH NC_012856.1 2586785 2587900 R protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase complement(2586785..2587900) Ralstonia pickettii 12D 8020135 YP_002982416.1 CDS Rpic12D_2472 NC_012856.1 2587957 2589192 R catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; imidazolonepropionase complement(2587957..2589192) Ralstonia pickettii 12D 8020136 YP_002982417.1 CDS Rpic12D_2473 NC_012856.1 2589185 2590162 R catalyzes the formation of glutamate and formamide from N-formimidoyl-L-glutamate; formimidoylglutamase complement(2589185..2590162) Ralstonia pickettii 12D 8020137 YP_002982418.1 CDS Rpic12D_2474 NC_012856.1 2590165 2591721 R catalyzes the degradation of histidine to urocanate and ammmonia; histidine ammonia-lyase complement(2590165..2591721) Ralstonia pickettii 12D 8020138 YP_002982419.1 CDS Rpic12D_2475 NC_012856.1 2591746 2593464 R catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism; urocanate hydratase complement(2591746..2593464) Ralstonia pickettii 12D 8020139 YP_002982420.1 CDS Rpic12D_2476 NC_012856.1 2593619 2594332 D KEGG: rso:RSc2648 histidine utilization repressor transcription regulator protein; TIGRFAM: histidine utilization repressor; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 2593619..2594332 Ralstonia pickettii 12D 8020140 YP_002982421.1 CDS Rpic12D_2477 NC_012856.1 2594340 2595209 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_A4207 ABC taurine transporter, inner membrane subunit; binding-protein-dependent transport system inner membrane protein complement(2594340..2595209) Ralstonia pickettii 12D 8020141 YP_002982422.1 CDS Rpic12D_2478 NC_012856.1 2595206 2595997 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: bur:Bcep18194_A6226 ABC taurine transporter, ATPase subunit; ABC transporter complement(2595206..2595997) Ralstonia pickettii 12D 8020142 YP_002982423.1 CDS Rpic12D_2479 NC_012856.1 2595994 2597058 R KEGG: bcm:Bcenmc03_2896 taurine ABC transporter, periplasmic binding protein; TIGRFAM: taurine ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3; taurine ABC transporter periplasmic binding protein complement(2595994..2597058) Ralstonia pickettii 12D 8020143 YP_002982424.1 CDS hrcA NC_012856.1 2597184 2598242 R Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor complement(2597184..2598242) Ralstonia pickettii 12D 8020144 YP_002982425.1 CDS ppnK NC_012856.1 2598354 2599292 D catalyzes the phosphorylation of NAD to NADP; NAD(+)/NADH kinase family protein 2598354..2599292 Ralstonia pickettii 12D 8020145 YP_002982426.1 CDS Rpic12D_2482 NC_012856.1 2599438 2601144 D TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: rso:RSc2651 DNA repair protein; DNA repair protein RecN 2599438..2601144 Ralstonia pickettii 12D 8020146 YP_002982427.1 CDS Rpic12D_2483 NC_012856.1 2601235 2601699 D KEGG: rso:RSc2652 lipoprotein; lipoprotein 2601235..2601699 Ralstonia pickettii 12D 8020147 YP_002982428.1 CDS Rpic12D_2484 NC_012856.1 2601964 2603607 D PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: rso:RSc2653 extracellular protease signal peptide protein; peptidase S8/S53 subtilisin kexin sedolisin 2601964..2603607 Ralstonia pickettii 12D 8020148 YP_002982429.1 CDS Rpic12D_2485 NC_012856.1 2603831 2605783 D PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: rso:RSc2654 serine protease protein; peptidase S8/S53 subtilisin kexin sedolisin 2603831..2605783 Ralstonia pickettii 12D 8020149 YP_002982430.1 CDS Rpic12D_2486 NC_012856.1 2605871 2606485 R KEGG: rso:RSc2655 hypothetical protein; hypothetical protein complement(2605871..2606485) Ralstonia pickettii 12D 8020150 YP_002982431.1 CDS Rpic12D_2487 NC_012856.1 2606482 2609325 R catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase complement(2606482..2609325) Ralstonia pickettii 12D 8020151 YP_002982432.1 CDS Rpic12D_2488 NC_012856.1 2609502 2613782 D KEGG: rso:RSc2657 hypothetical protein; hypothetical protein 2609502..2613782 Ralstonia pickettii 12D 8020152 YP_002982433.1 CDS Rpic12D_2489 NC_012856.1 2613788 2614657 D PFAM: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rso:RSc2658 nitrilase protein; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 2613788..2614657 Ralstonia pickettii 12D 8020153 YP_002982434.1 CDS Rpic12D_2490 NC_012856.1 2614688 2616151 D PFAM: peptidase U62 modulator of DNA gyrase; KEGG: rso:RSc2659 TldD protein; peptidase U62 modulator of DNA gyrase 2614688..2616151 Ralstonia pickettii 12D 8020154 YP_002982435.1 CDS Rpic12D_2491 NC_012856.1 2616540 2617619 D catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 2616540..2617619 Ralstonia pickettii 12D 8020155 YP_002982436.1 CDS Rpic12D_2492 NC_012856.1 2617790 2618692 D PFAM: MscS Mechanosensitive ion channel; KEGG: rso:RSc2662 hypothetical protein; mechanosensitive ion channel MscS 2617790..2618692 Ralstonia pickettii 12D 8020156 YP_002982437.1 CDS Rpic12D_2493 NC_012856.1 2618771 2619328 R TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: rso:RSc2663 hypothetical protein; ATP/cobalamin adenosyltransferase complement(2618771..2619328) Ralstonia pickettii 12D 8020157 YP_002982438.1 CDS Rpic12D_2494 NC_012856.1 2619447 2620865 D PFAM: FAD linked oxidase domain protein; KEGG: rso:RSc2664 D-lactate dehydrogenase (cytochrome) oxidoreductase protein; FAD linked oxidase domain-containing protein 2619447..2620865 Ralstonia pickettii 12D 8020158 YP_002982439.1 CDS Rpic12D_2495 NC_012856.1 2620893 2621783 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RSc2665 transcription regulator protein; LysR family transcriptional regulator 2620893..2621783 Ralstonia pickettii 12D 8020159 YP_002982440.1 CDS Rpic12D_2496 NC_012856.1 2622282 2623781 D PFAM: FAD linked oxidase domain protein; KEGG: rso:RSc2666 glycolate oxidase FAD-linked subunit oxidoreductase; D-lactate dehydrogenase 2622282..2623781 Ralstonia pickettii 12D 8020160 YP_002982441.1 CDS glcE NC_012856.1 2623844 2624977 D PFAM: FAD linked oxidase domain protein; KEGG: rso:RSc2667 glycolate oxidase FAD binding subunit; glycolate oxidase FAD binding subunit 2623844..2624977 Ralstonia pickettii 12D 8020161 YP_002982442.1 CDS glcF NC_012856.1 2625004 2626248 D PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: rso:RSc2668 glycolate oxidase iron-sulfur subunit; glycolate oxidase iron-sulfur subunit 2625004..2626248 Ralstonia pickettii 12D 8020162 YP_002982443.1 CDS Rpic12D_2499 NC_012856.1 2626301 2626690 D PFAM: LrgA family protein; KEGG: rso:RSc2669 hypothetical protein; LrgA family protein 2626301..2626690 Ralstonia pickettii 12D 8020163 YP_002982444.1 CDS Rpic12D_2500 NC_012856.1 2626687 2627418 D PFAM: LrgB family protein; KEGG: rso:RSc2670 hypothetical protein; LrgB family protein 2626687..2627418 Ralstonia pickettii 12D 8020164 YP_002982445.1 CDS Rpic12D_2501 NC_012856.1 2627590 2627985 D PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rso:RSc2671 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 2627590..2627985 Ralstonia pickettii 12D 8020165 YP_002982446.1 CDS Rpic12D_2502 NC_012856.1 2628043 2628522 D PFAM: cupin; KEGG: rso:RSc2672 hypothetical protein; cupin 2628043..2628522 Ralstonia pickettii 12D 8020166 YP_002982447.1 CDS Rpic12D_2503 NC_012856.1 2628566 2629264 D PFAM: Helix-turn-helix type 11 domain protein; KEGG: rso:RSc2673 repressor transcription regulator protein; helix-turn-helix type 11 domain-containing protein 2628566..2629264 Ralstonia pickettii 12D 8020167 YP_002982448.1 CDS Rpic12D_2504 NC_012856.1 2629289 2629786 R PFAM: glutathione peroxidase; KEGG: rso:RSc2674 glutathione peroxidase protein; glutathione peroxidase complement(2629289..2629786) Ralstonia pickettii 12D 8020168 YP_002982449.1 CDS Rpic12D_2505 NC_012856.1 2629882 2631021 R TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: rso:RSc2681 twitching motility protein; twitching motility protein complement(2629882..2631021) Ralstonia pickettii 12D 8020169 YP_002982450.1 CDS Rpic12D_2506 NC_012856.1 2631088 2632131 R KEGG: rso:RSc2682 twitching motility protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase; twitching motility protein complement(2631088..2632131) Ralstonia pickettii 12D 8020170 YP_002982451.1 CDS Rpic12D_2507 NC_012856.1 2632254 2632970 D PFAM: alanine racemase domain protein; KEGG: rso:RSc2683 hypothetical protein; alanine racemase domain-containing protein 2632254..2632970 Ralstonia pickettii 12D 8020171 YP_002982452.1 CDS Rpic12D_2508 NC_012856.1 2633001 2633825 D catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 2633001..2633825 Ralstonia pickettii 12D 8020172 YP_002982453.1 CDS ubiA NC_012856.1 2633890 2634765 R catalyzes the conversion of 4-hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway; 4-hydroxybenzoate octaprenyltransferase complement(2633890..2634765) Ralstonia pickettii 12D 8020173 YP_002982454.1 CDS Rpic12D_2510 NC_012856.1 2634833 2636998 R TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; KEGG: aav:Aave_3132 catalase/peroxidase HPI; catalase/peroxidase HPI complement(2634833..2636998) Ralstonia pickettii 12D 8020174 YP_002982455.1 CDS Rpic12D_2511 NC_012856.1 2637126 2637626 R PFAM: Ferritin Dps family protein; KEGG: rso:RSc2687 DNA protection during starvation or oxydative stress transcription regulator protein; ferritin Dps family protein complement(2637126..2637626) Ralstonia pickettii 12D 8020175 YP_002982456.1 CDS Rpic12D_2512 NC_012856.1 2637801 2638043 R KEGG: rso:RSc2688 hypothetical protein; hypothetical protein complement(2637801..2638043) Ralstonia pickettii 12D 8020176 YP_002982457.1 CDS Rpic12D_2513 NC_012856.1 2638814 2640031 D PFAM: ATPase AAA; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: bcm:Bcenmc03_5051 ATPase central domain-containing protein; ATPase AAA 2638814..2640031 Ralstonia pickettii 12D 8020177 YP_002982458.1 CDS Rpic12D_2514 NC_012856.1 2640174 2640365 D hypothetical protein 2640174..2640365 Ralstonia pickettii 12D 8020178 YP_002982459.1 CDS Rpic12D_2515 NC_012856.1 2640406 2641668 R KEGG: bmj:BMULJ_03788 hypothetical protein; hypothetical protein complement(2640406..2641668) Ralstonia pickettii 12D 8020179 YP_002982460.1 CDS Rpic12D_2516 NC_012856.1 2641748 2642506 R PFAM: Gp37Gp68 family protein; KEGG: pst:PSPTO_0049 hypothetical protein; Gp37Gp68 family protein complement(2641748..2642506) Ralstonia pickettii 12D 8020180 YP_002982461.1 CDS Rpic12D_2517 NC_012856.1 2642503 2643081 R PFAM: peptidase S24 and S26 domain protein; KEGG: mfa:Mfla_1781 prophage repressor; peptidase S24 and S26 domain-containing protein complement(2642503..2643081) Ralstonia pickettii 12D 8020181 YP_002982462.1 CDS Rpic12D_2518 NC_012856.1 2643242 2644096 R KEGG: rfr:Rfer_1071 hypothetical protein; hypothetical protein complement(2643242..2644096) Ralstonia pickettii 12D 8020182 YP_002982463.1 CDS Rpic12D_2519 NC_012856.1 2644251 2644913 R KEGG: pna:Pnap_2236 hypothetical protein; hypothetical protein complement(2644251..2644913) Ralstonia pickettii 12D 8020183 YP_002982464.1 CDS Rpic12D_2520 NC_012856.1 2645876 2646229 D KEGG: xac:XAC2421 hypothetical protein; hypothetical protein 2645876..2646229 Ralstonia pickettii 12D 8020184 YP_002982465.1 CDS Rpic12D_2521 NC_012856.1 2646403 2648001 D KEGG: pca:Pcar_0116 hypothetical protein; hypothetical protein 2646403..2648001 Ralstonia pickettii 12D 8020185 YP_002982466.1 CDS Rpic12D_2522 NC_012856.1 2647960 2649033 R KEGG: tcx:Tcr_1645 hypothetical protein; hypothetical protein complement(2647960..2649033) Ralstonia pickettii 12D 8020186 YP_002982467.1 CDS Rpic12D_2523 NC_012856.1 2649030 2649935 R PFAM: TniB family protein; KEGG: asa:ASA_1044 TniB; TniB family protein complement(2649030..2649935) Ralstonia pickettii 12D 8020187 YP_002982468.1 CDS Rpic12D_2524 NC_012856.1 2649928 2651826 R KEGG: asa:ASA_1043 TniA transposase; TniA transposase complement(2649928..2651826) Ralstonia pickettii 12D 8020188 YP_002982469.1 CDS Rpic12D_2525 NC_012856.1 2651854 2652501 R PFAM: TnsA endonuclease; KEGG: rfr:Rfer_3933 hypothetical protein; TnsA endonuclease complement(2651854..2652501) Ralstonia pickettii 12D 8020189 YP_002982470.1 CDS Rpic12D_2526 NC_012856.1 2652943 2653866 D TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: reu:Reut_B5170 cation efflux protein; cation diffusion facilitator family transporter 2652943..2653866 Ralstonia pickettii 12D 8020190 YP_002982471.1 CDS Rpic12D_2527 NC_012856.1 2653863 2655470 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: rme:Rmet_5322 periplasmic sensor signal transduction histidine kinase; histidine kinase complement(2653863..2655470) Ralstonia pickettii 12D 8020191 YP_002982472.1 CDS Rpic12D_2528 NC_012856.1 2655548 2656153 D PFAM: response regulator receiver; regulatory protein LuxR; Bacterio-opsin activator HTH domain protein; SMART: response regulator receiver; regulatory protein LuxR; KEGG: rme:Rmet_5323 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 2655548..2656153 Ralstonia pickettii 12D 8020192 YP_002982473.1 CDS Rpic12D_2529 NC_012856.1 2656183 2659350 R TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: rme:Rmet_5319 heavy metal efflux pump CzcA; CzcA family heavy metal efflux pump complement(2656183..2659350) Ralstonia pickettii 12D 8020193 YP_002982474.1 CDS Rpic12D_2530 NC_012856.1 2659363 2660517 R TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rme:Rmet_5320 secretion protein HlyD; RND family efflux transporter MFP subunit complement(2659363..2660517) Ralstonia pickettii 12D 8020194 YP_002982475.1 CDS Rpic12D_2531 NC_012856.1 2660783 2662237 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rme:Rmet_5321 RND efflux system, outer membrane lipoprotein, NodT; NodT family RND efflux system outer membrane lipoprotein 2660783..2662237 Ralstonia pickettii 12D 8020195 YP_002982476.1 CDS Rpic12D_2532 NC_012856.1 2662291 2663079 R KEGG: pnu:Pnuc_1326 hypothetical protein; hypothetical protein complement(2662291..2663079) Ralstonia pickettii 12D 8020196 YP_002982477.1 CDS Rpic12D_2533 NC_012856.1 2663363 2663803 D hypothetical protein 2663363..2663803 Ralstonia pickettii 12D 8020197 YP_002982478.1 CDS Rpic12D_2534 NC_012856.1 2663881 2665524 R PFAM: natural resistance-associated macrophage protein; KEGG: rso:RSp0027 manganese transport transmembrane protein; natural resistance-associated macrophage protein complement(2663881..2665524) Ralstonia pickettii 12D 8020198 YP_002982479.1 CDS Rpic12D_2535 NC_012856.1 2665568 2665771 R KEGG: rso:RS02001 hypothetical protein; hypothetical protein complement(2665568..2665771) Ralstonia pickettii 12D 8020199 YP_002982480.1 CDS Rpic12D_2536 NC_012856.1 2666166 2667662 R PFAM: carbohydrate-selective porin OprB; KEGG: rso:RSc1195 hypothetical protein; carbohydrate-selective porin OprB complement(2666166..2667662) Ralstonia pickettii 12D 8020200 YP_002982481.1 CDS Rpic12D_2538 NC_012856.1 2669193 2669471 D PFAM: protein of unknown function DUF156; KEGG: bte:BTH_II0391 hypothetical protein; hypothetical protein 2669193..2669471 Ralstonia pickettii 12D 8020202 YP_002982482.1 CDS Rpic12D_2539 NC_012856.1 2669479 2670783 D TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: bam:Bamb_5056 cation diffusion facilitator family transporter; cation diffusion facilitator family transporter 2669479..2670783 Ralstonia pickettii 12D 8020203 YP_002982483.1 CDS Rpic12D_2540 NC_012856.1 2670927 2671880 D KEGG: nha:Nham_4399 hypothetical protein; hypothetical protein 2670927..2671880 Ralstonia pickettii 12D 8020204 YP_002982484.1 CDS Rpic12D_2541 NC_012856.1 2672113 2673123 D PFAM: sodium/calcium exchanger membrane region; KEGG: cvi:CV_2442 cation antiporter; sodium/calcium exchanger membrane region 2672113..2673123 Ralstonia pickettii 12D 8020205 YP_002982485.1 CDS Rpic12D_2542 NC_012856.1 2673305 2674252 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RSc2690 hydrogen peroxide-inducible genes activator transcription regulator protein; LysR family transcriptional regulator complement(2673305..2674252) Ralstonia pickettii 12D 8020206 YP_002982486.1 CDS Rpic12D_2543 NC_012856.1 2674404 2675567 D PFAM: metallophosphoesterase; KEGG: dar:Daro_3826 metallophosphoesterase; metallophosphoesterase 2674404..2675567 Ralstonia pickettii 12D 8020207 YP_002982487.1 CDS Rpic12D_2544 NC_012856.1 2675643 2676773 D KEGG: bac:BamMC406_1290 diguanylate cyclase with GAF sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; SMART: GGDEF domain containing protein; GAF domain protein; GAF sensor-containing diguanylate cyclase 2675643..2676773 Ralstonia pickettii 12D 8020208 YP_002982488.1 CDS Rpic12D_2545 NC_012856.1 2676791 2678938 R catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG complement(2676791..2678938) Ralstonia pickettii 12D 8020209 YP_002982489.1 CDS queA NC_012856.1 2679070 2680140 D Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 2679070..2680140 Ralstonia pickettii 12D 8020210 YP_002982490.1 CDS tgt NC_012856.1 2680143 2681294 D Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 2680143..2681294 Ralstonia pickettii 12D 8020211 YP_002982491.1 CDS yajC NC_012856.1 2681400 2681732 D member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC 2681400..2681732 Ralstonia pickettii 12D 8020212 YP_002982492.1 CDS secD NC_012856.1 2681843 2683732 D part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 2681843..2683732 Ralstonia pickettii 12D 8020213 YP_002982493.1 CDS secF NC_012856.1 2683808 2684779 D forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 2683808..2684779 Ralstonia pickettii 12D 8020214 YP_002982494.1 CDS Rpic12D_2551 NC_012856.1 2684875 2685471 R PFAM: YceI family protein; KEGG: rso:RSc2717 signal peptide protein; hypothetical protein complement(2684875..2685471) Ralstonia pickettii 12D 8020215 YP_002982495.1 CDS Rpic12D_2552 NC_012856.1 2685536 2686108 R PFAM: YceI family protein; KEGG: rso:RSc2718 signal peptide protein; hypothetical protein complement(2685536..2686108) Ralstonia pickettii 12D 8020216 YP_002982496.1 CDS Rpic12D_2553 NC_012856.1 2686208 2686789 R PFAM: cytochrome B561; KEGG: rso:RSc2719 cytochrome b-561 transmembrane protein; cytochrome B561 complement(2686208..2686789) Ralstonia pickettii 12D 8020217 YP_002982497.1 CDS Rpic12D_2554 NC_012856.1 2687053 2688426 R Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase complement(2687053..2688426) Ralstonia pickettii 12D 8020218 YP_002982498.1 CDS Rpic12D_2555 NC_012856.1 2688666 2689274 D PFAM: Glutathione S-transferase domain; KEGG: rso:RSc2721 glutathione S-transferase protein; glutathione S-transferase 2688666..2689274 Ralstonia pickettii 12D 8020219 YP_002982499.1 CDS Rpic12D_2556 NC_012856.1 2689295 2690893 R PFAM: ferredoxin-dependent glutamate synthase; KEGG: rso:RSc2722 signal peptide protein; ferredoxin-dependent glutamate synthase complement(2689295..2690893) Ralstonia pickettii 12D 8020220 YP_002982500.1 CDS mnmA NC_012856.1 2690983 2692095 R catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA complement(2690983..2692095) Ralstonia pickettii 12D 8020221 YP_002982501.1 CDS Rpic12D_2558 NC_012856.1 2692092 2692586 R PFAM: NUDIX hydrolase; KEGG: rso:RSc2724 hypothetical protein; NUDIX hydrolase complement(2692092..2692586) Ralstonia pickettii 12D 8020222 YP_002982502.1 CDS Rpic12D_2559 NC_012856.1 2692874 2694013 D PFAM: alanine dehydrogenase/PNT domain protein; KEGG: rso:RSc2730 NAD(P) transhydrogenase alpha subunit; NAD(P)(+) transhydrogenase 2692874..2694013 Ralstonia pickettii 12D 8020223 YP_002982503.1 CDS Rpic12D_2560 NC_012856.1 2694096 2694458 D Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 2694096..2694458 Ralstonia pickettii 12D 8020224 YP_002982504.1 CDS Rpic12D_2561 NC_012856.1 2694527 2694856 D KEGG: rso:RSc2732 transmembrane NAD(P) transhydrogenase alpha subunit; transmembrane NAD(P) transhydrogenase subunit alpha 2694527..2694856 Ralstonia pickettii 12D 8020225 YP_002982505.1 CDS Rpic12D_2562 NC_012856.1 2694853 2696313 D PFAM: NAD(P) transhydrogenase beta subunit; KEGG: rso:RSc2733 transmembrane NADP transhydrogenase subunit beta oxidoreductase protein; NAD(P)(+) transhydrogenase 2694853..2696313 Ralstonia pickettii 12D 8020226 YP_002982506.1 CDS Rpic12D_2563 NC_012856.1 2696476 2697513 D PFAM: response regulator receiver; KEGG: rso:RSc2734 response regulator transcription regulator protein; response regulator receiver protein 2696476..2697513 Ralstonia pickettii 12D 8020227 YP_002982507.1 CDS Rpic12D_2564 NC_012856.1 2698169 2699581 D KEGG: rso:RSc2735 regulatory protein; regulatory protein 2698169..2699581 Ralstonia pickettii 12D 8020228 YP_002982508.1 CDS Rpic12D_2565 NC_012856.1 2699601 2700929 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rso:RSc2736 transmembrane sensor histidine kinase transcription regulator protein; histidine kinase 2699601..2700929 Ralstonia pickettii 12D 8020229 YP_002982509.1 CDS Rpic12D_2566 NC_012856.1 2700934 2702043 D PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: rso:RSc2737 two component response regulator transcription regulator protein; response regulator receiver sensor signal transduction histidine kinase 2700934..2702043 Ralstonia pickettii 12D 8020230 YP_002982510.1 CDS Rpic12D_2567 NC_012856.1 2702126 2703145 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: rso:RSc2738 response regulator transcription regulator protein; response regulator receiver protein 2702126..2703145 Ralstonia pickettii 12D 8020231 YP_002982511.1 CDS Rpic12D_2568 NC_012856.1 2703179 2704597 R PFAM: RNA methylase; THUMP domain protein; KEGG: rso:RSc2739 hypothetical protein; RNA methylase complement(2703179..2704597) Ralstonia pickettii 12D 8020232 YP_002982512.1 CDS Rpic12D_2569 NC_012856.1 2704615 2705037 R PFAM: conserved hypothetical protein; KEGG: rso:RSc2740 hypothetical protein; hypothetical protein complement(2704615..2705037) Ralstonia pickettii 12D 8020233 YP_002982513.1 CDS proA NC_012856.1 2705123 2706403 R Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase complement(2705123..2706403) Ralstonia pickettii 12D 8020234 YP_002982514.1 CDS holA NC_012856.1 2706476 2707552 R required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta complement(2706476..2707552) Ralstonia pickettii 12D 8020235 YP_002982515.1 CDS Rpic12D_2572 NC_012856.1 2707578 2708102 R PFAM: Rare lipoprotein B; KEGG: rso:RSc2743 lipoprotein B precursor transmembrane; Rare lipoprotein B complement(2707578..2708102) Ralstonia pickettii 12D 8020236 YP_002982516.1 CDS leuS NC_012856.1 2708133 2710766 R leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase complement(2708133..2710766) Ralstonia pickettii 12D 8020237 YP_002982517.1 CDS Rpic12D_2574 NC_012856.1 2710941 2711732 R catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase complement(2710941..2711732) Ralstonia pickettii 12D 8020238 YP_002982518.1 CDS Rpic12D_2575 NC_012856.1 2711838 2712494 R PFAM: SmpA/OmlA domain protein; KEGG: rso:RSc2746 lipoprotein transmembrane; SmpA/OmlA domain-containing protein complement(2711838..2712494) Ralstonia pickettii 12D 8020239 YP_002982519.1 CDS Rpic12D_2576 NC_012856.1 2712647 2713078 D PFAM: ferric-uptake regulator; KEGG: rso:RSc2747 ferric uptake transcriptional repressor transcription regulator protein; Fur family ferric uptake regulator 2712647..2713078 Ralstonia pickettii 12D 8020240 YP_002982520.1 CDS Rpic12D_2577 NC_012856.1 2713151 2714194 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RSc2748 transcription regulator protein; LysR family transcriptional regulator complement(2713151..2714194) Ralstonia pickettii 12D 8020241 YP_002982521.1 CDS Rpic12D_2578 NC_012856.1 2714512 2715510 R KEGG: reu:Reut_A2840 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase complement(2714512..2715510) Ralstonia pickettii 12D 8020242 YP_002982522.1 CDS Rpic12D_2579 NC_012856.1 2715597 2717612 R catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase complement(2715597..2717612) Ralstonia pickettii 12D 8020243 YP_002982523.1 CDS Rpic12D_2580 NC_012856.1 2717728 2718876 R PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: rso:RSc2751 galactonate dehydratase protein; galactonate dehydratase complement(2717728..2718876) Ralstonia pickettii 12D 8020244 YP_002982524.1 CDS Rpic12D_2581 NC_012856.1 2718897 2719523 R catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase complement(2718897..2719523) Ralstonia pickettii 12D 8020245 YP_002982525.1 CDS Rpic12D_2582 NC_012856.1 2719520 2720329 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rso:RSc2753 short chain dehydrogenase; short chain dehydrogenase complement(2719520..2720329) Ralstonia pickettii 12D 8020246 YP_002982526.1 CDS Rpic12D_2583 NC_012856.1 2720326 2721210 R PFAM: aldose 1-epimerase; KEGG: rso:RSc2754 hypothetical protein; aldose 1-epimerase complement(2720326..2721210) Ralstonia pickettii 12D 8020247 YP_002982527.1 CDS Rpic12D_2584 NC_012856.1 2721191 2722105 R PFAM: SMP-30/Gluconolaconase/LRE domain protein; SMART: low-density lipoprotein receptor YWTD repeat; KEGG: rso:RSc2755 hypothetical protein; SMP-30/gluconolaconase/LRE domain-containing protein complement(2721191..2722105) Ralstonia pickettii 12D 8020248 YP_002982528.1 CDS araH NC_012856.1 2722117 2723124 R Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter permease complement(2722117..2723124) Ralstonia pickettii 12D 8020249 YP_002982529.1 CDS araG NC_012856.1 2723142 2724677 R Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter ATP-binding protein complement(2723142..2724677) Ralstonia pickettii 12D 8020250 YP_002982530.1 CDS Rpic12D_2587 NC_012856.1 2724711 2725715 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: rso:RSc2758 L-arabinose ABC transporter periplasmic-binding protein; monosaccharide-transporting ATPase complement(2724711..2725715) Ralstonia pickettii 12D 8020251 YP_002982531.1 CDS Rpic12D_2588 NC_012856.1 2725792 2726805 R KEGG: rso:RSc2759 2-dehydro-3-deoxygalactonokinase protein; 2-dehydro-3-deoxygalactonokinase complement(2725792..2726805) Ralstonia pickettii 12D 8020252 YP_002982532.1 CDS Rpic12D_2589 NC_012856.1 2726980 2728056 R PFAM: porin Gram-negative type; KEGG: rso:RSc2760 porin signal peptide protein; porin complement(2726980..2728056) Ralstonia pickettii 12D 8020253 YP_002982533.1 CDS Rpic12D_2590 NC_012856.1 2728232 2729158 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RSc2761 transcription regulator protein; LysR family transcriptional regulator 2728232..2729158 Ralstonia pickettii 12D 8020254 YP_002982534.1 CDS Rpic12D_2591 NC_012856.1 2729236 2729655 D PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rso:RSc2762 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 2729236..2729655 Ralstonia pickettii 12D 8020255 YP_002982535.1 CDS Rpic12D_2592 NC_012856.1 2729706 2730455 D PFAM: protein of unknown function DUF558; KEGG: rso:RSc2763 hypothetical protein; hypothetical protein 2729706..2730455 Ralstonia pickettii 12D 8020256 YP_002982536.1 CDS Rpic12D_2593 NC_012856.1 2730549 2731148 D PFAM: protein of unknown function DUF937; KEGG: rso:RSc2764 hypothetical protein; hypothetical protein 2730549..2731148 Ralstonia pickettii 12D 8020257 YP_002982537.1 CDS Rpic12D_2594 NC_012856.1 2731204 2732148 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bph:Bphy_6715 LysR family transcriptional regulator; LysR family transcriptional regulator complement(2731204..2732148) Ralstonia pickettii 12D 8020258 YP_002982538.1 CDS Rpic12D_2595 NC_012856.1 2732349 2734085 D catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase 2732349..2734085 Ralstonia pickettii 12D 8020259 YP_002982539.1 CDS Rpic12D_2596 NC_012856.1 2734112 2735053 D PFAM: dihydrodipicolinate synthetase; KEGG: bte:BTH_II1630 dihydrodipicolinate synthase; dihydrodipicolinate synthetase 2734112..2735053 Ralstonia pickettii 12D 8020260 YP_002982540.1 CDS Rpic12D_2597 NC_012856.1 2735056 2735994 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bph:Bphy_4216 galactose 1-dehydrogenase; galactose 1-dehydrogenase 2735056..2735994 Ralstonia pickettii 12D 8020261 YP_002982541.1 CDS Rpic12D_2598 NC_012856.1 2736048 2737052 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bpy:Bphyt_3960 monosaccharide-transporting ATPase; monosaccharide-transporting ATPase 2736048..2737052 Ralstonia pickettii 12D 8020262 YP_002982542.1 CDS araG NC_012856.1 2737205 2738734 D Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter ATP-binding protein 2737205..2738734 Ralstonia pickettii 12D 8020263 YP_002982543.1 CDS araH NC_012856.1 2738768 2739778 D Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter permease 2738768..2739778 Ralstonia pickettii 12D 8020264 YP_002982544.1 CDS Rpic12D_2601 NC_012856.1 2739869 2740492 R PFAM: Barstar (barnase inhibitor); KEGG: rso:RSc2765 hypothetical protein; barnase inhibitor complement(2739869..2740492) Ralstonia pickettii 12D 8020265 YP_002982545.1 CDS Rpic12D_2602 NC_012856.1 2740489 2740920 R PFAM: guanine-specific ribonuclease N1 and T1; KEGG: rso:RSc2766 guanyl-specific ribonuclease precursor signal peptide protein; guanine-specific ribonuclease N1 and T1 complement(2740489..2740920) Ralstonia pickettii 12D 8020266 YP_002982546.1 CDS Rpic12D_2603 NC_012856.1 2741392 2743737 R NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme complement(2741392..2743737) Ralstonia pickettii 12D 8020267 YP_002982547.1 CDS Rpic12D_2604 NC_012856.1 2743899 2744984 D catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase 2743899..2744984 Ralstonia pickettii 12D 8020268 YP_002982548.1 CDS Rpic12D_2605 NC_012856.1 2744984 2745559 D PFAM: phosphatidylglycerophosphatase A; KEGG: rso:RSc2769 phosphatidyl-glycerophosphatase hydrolase transmembrane protein; phosphatidylglycerophosphatase A 2744984..2745559 Ralstonia pickettii 12D 8020269 YP_002982549.1 CDS Rpic12D_2606 NC_012856.1 2745592 2746092 D PFAM: CinA domain protein; KEGG: rso:RSc2770 hypothetical protein; CinA domain-containing protein 2745592..2746092 Ralstonia pickettii 12D 8020270 YP_002982550.1 CDS Rpic12D_2607 NC_012856.1 2746094 2746312 R KEGG: rso:RSc2772 metal transport transmembrane protein; metal transport transmembrane protein complement(2746094..2746312) Ralstonia pickettii 12D 8020271 YP_002982551.1 CDS pyrF NC_012856.1 2746353 2747204 R type 2 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase complement(2746353..2747204) Ralstonia pickettii 12D 8020272 YP_002982552.1 CDS Rpic12D_2609 NC_012856.1 2747380 2748342 D TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: rso:RSc2774 magnesium/cobalt transporter CorA; magnesium and cobalt transport protein CorA 2747380..2748342 Ralstonia pickettii 12D 8020273 YP_002982553.1 CDS mtgA NC_012856.1 2748355 2749059 R glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase complement(2748355..2749059) Ralstonia pickettii 12D 8020274 YP_002982554.1 CDS aroE NC_012856.1 2749080 2749997 R AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase complement(2749080..2749997) Ralstonia pickettii 12D 8020275 YP_002982555.1 CDS Rpic12D_2612 NC_012856.1 2750009 2750923 R TIGRFAM: TonB family protein; KEGG: rso:RSc2778 hypothetical protein; TonB family protein complement(2750009..2750923) Ralstonia pickettii 12D 8020276 YP_002982556.1 CDS Rpic12D_2613 NC_012856.1 2750976 2753072 R PFAM: ribonuclease II; KEGG: rso:RSc2779 hypothetical protein; ribonuclease II complement(2750976..2753072) Ralstonia pickettii 12D 8020277 YP_002982557.1 CDS Rpic12D_2614 NC_012856.1 2753226 2753804 R PFAM: Chorismate lyase; KEGG: rso:RSc2780 hypothetical protein; chorismate lyase complement(2753226..2753804) Ralstonia pickettii 12D 8020278 YP_002982558.1 CDS Rpic12D_2615 NC_012856.1 2753801 2754424 R PFAM: protein of unknown function UPF0227; KEGG: rso:RSc2781 hypothetical protein; hypothetical protein complement(2753801..2754424) Ralstonia pickettii 12D 8020279 YP_002982559.1 CDS Rpic12D_2616 NC_012856.1 2754432 2755817 R TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: rso:RSc2782 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase transmembrane protein; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase complement(2754432..2755817) Ralstonia pickettii 12D 8020280 YP_002982560.1 CDS Rpic12D_2617 NC_012856.1 2755896 2756570 D KEGG: rso:RSc2783 hypothetical protein; hypothetical protein 2755896..2756570 Ralstonia pickettii 12D 8020281 YP_002982561.1 CDS Rpic12D_2618 NC_012856.1 2756637 2757161 D PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: rso:RSc2784 thioredoxin-related transmembrane protein; redoxin domain-containing protein 2756637..2757161 Ralstonia pickettii 12D 8020282 YP_002982562.1 CDS Rpic12D_2619 NC_012856.1 2757179 2757301 D hypothetical protein 2757179..2757301 Ralstonia pickettii 12D 8020283 YP_002982563.1 CDS Rpic12D_2620 NC_012856.1 2757344 2757811 D catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 2757344..2757811 Ralstonia pickettii 12D 8020284 YP_002982564.1 CDS Rpic12D_2621 NC_012856.1 2757954 2758421 D composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 2757954..2758421 Ralstonia pickettii 12D 8020285 YP_002982565.1 CDS Rpic12D_2622 NC_012856.1 2758554 2759921 D an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 2758554..2759921 Ralstonia pickettii 12D 8020286 YP_002982566.1 CDS prmA NC_012856.1 2759918 2760814 D methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase 2759918..2760814 Ralstonia pickettii 12D 8020287 YP_002982567.1 CDS Rpic12D_2624 NC_012856.1 2761232 2762350 D KEGG: rso:RSc2789 hypothetical protein; hypothetical protein 2761232..2762350 Ralstonia pickettii 12D 8020288 YP_002982568.1 CDS tpx NC_012856.1 2762501 2763001 D antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein; thiol peroxidase 2762501..2763001 Ralstonia pickettii 12D 8020289 YP_002982569.1 CDS Rpic12D_2626 NC_012856.1 2763094 2764029 D PFAM: PfkB domain protein; KEGG: rso:RSc2791 sugar kinase transferase protein; PfkB domain-containing protein 2763094..2764029 Ralstonia pickettii 12D 8020290 YP_002982570.1 CDS Rpic12D_2627 NC_012856.1 2764039 2764506 D PFAM: 17 kDa surface antigen; KEGG: rso:RSc2792 outer membrane lipoprotein transmembrane; 17 kDa surface antigen 2764039..2764506 Ralstonia pickettii 12D 8020291 YP_002982571.1 CDS Rpic12D_2628 NC_012856.1 2764758 2765333 R KEGG: rso:RSc2793 histone H1 protein; histone H1 complement(2764758..2765333) Ralstonia pickettii 12D 8020292 YP_002982572.1 CDS Rpic12D_2629 NC_012856.1 2767073 2767882 D KEGG: rso:RSc2796 hemagglutinin-related transmembrane protein; putative hemagglutinin-like transmembrane protein 2767073..2767882 Ralstonia pickettii 12D 8020293 YP_002982573.1 CDS Rpic12D_2630 NC_012856.1 2768015 2769172 D KEGG: rso:RSc2797 hemagglutinin-related transmembrane protein; putative hemagglutinin-like transmembrane protein 2768015..2769172 Ralstonia pickettii 12D 8020294 YP_002982574.1 CDS Rpic12D_2631 NC_012856.1 2769239 2769694 D KEGG: rso:RSc2798 signal peptide protein; signal peptide protein 2769239..2769694 Ralstonia pickettii 12D 8020295 YP_002982575.1 CDS Rpic12D_2632 NC_012856.1 2769902 2771449 D PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; SMART: chemotaxis sensory transducer; KEGG: rso:RSc2799 methyl-accepting chemotaxis transmembrane protein; Cache sensor-containing methyl-accepting chemotaxis sensory transducer 2769902..2771449 Ralstonia pickettii 12D 8020296 YP_002982576.1 CDS Rpic12D_2633 NC_012856.1 2771568 2772911 D KEGG: rso:RSc2800 hypothetical protein; hypothetical protein 2771568..2772911 Ralstonia pickettii 12D 8020297 YP_002982577.1 CDS Rpic12D_2634 NC_012856.1 2773077 2773919 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RSc2802 hypothetical protein; hypothetical protein 2773077..2773919 Ralstonia pickettii 12D 8020298 YP_002982578.1 CDS Rpic12D_2635 NC_012856.1 2773916 2774998 R KEGG: rso:RSc2803 hypothetical protein; hypothetical protein complement(2773916..2774998) Ralstonia pickettii 12D 8020299 YP_002982579.1 CDS Rpic12D_2636 NC_012856.1 2775163 2776371 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta complement(2775163..2776371) Ralstonia pickettii 12D 8020300 YP_002982580.1 CDS Rpic12D_2637 NC_012856.1 2776488 2779472 R Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha complement(2776488..2779472) Ralstonia pickettii 12D 8020301 YP_002982581.1 CDS Rpic12D_2638 NC_012856.1 2780125 2782155 D KEGG: reu:Reut_B4286 hypothetical protein; hypothetical protein 2780125..2782155 Ralstonia pickettii 12D 8020302 YP_002982582.1 CDS Rpic12D_2639 NC_012856.1 2782186 2782386 D KEGG: reh:H16_B1167 hypothetical protein; hypothetical protein 2782186..2782386 Ralstonia pickettii 12D 8020303 YP_002982583.1 CDS Rpic12D_2640 NC_012856.1 2782423 2784582 D KEGG: reh:H16_B1166 phospholipase C; TIGRFAM: phospholipase C, phosphocholine-specific; PFAM: phosphoesterase; protein of unknown function DUF756; phosphocholine-specific phospholipase C 2782423..2784582 Ralstonia pickettii 12D 8020304 YP_002982584.1 CDS Rpic12D_2641 NC_012856.1 2784655 2785251 R PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: rso:RSc2806 N-acetyl-anhydromuranmyl-L-alanine amidase; N-acetyl-anhydromuranmyl-L-alanine amidase complement(2784655..2785251) Ralstonia pickettii 12D 8020305 YP_002982585.1 CDS Rpic12D_2642 NC_012856.1 2785244 2786872 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; SMART: response regulator receiver; AAA ATPase; KEGG: rso:RSc2807 response regulator transcription regulator protein; Fis family two component sigma-54 specific transcriptional regulator complement(2785244..2786872) Ralstonia pickettii 12D 8020306 YP_002982586.1 CDS Rpic12D_2643 NC_012856.1 2786912 2788951 R PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; KEGG: rso:RSc2808 transmembrane sensor histidine kinase transcription regulator protein; PAS/PAC sensor signal transduction histidine kinase complement(2786912..2788951) Ralstonia pickettii 12D 8020307 YP_002982587.1 CDS Rpic12D_2644 NC_012856.1 2788948 2789214 R KEGG: rso:RSc2809 hypothetical protein; hypothetical protein complement(2788948..2789214) Ralstonia pickettii 12D 8020308 YP_002982588.1 CDS Rpic12D_2645 NC_012856.1 2789260 2790168 R PFAM: cytochrome C assembly protein; KEGG: rso:RSc2810 hypothetical protein; cytochrome C assembly protein complement(2789260..2790168) Ralstonia pickettii 12D 8020309 YP_002982589.1 CDS Rpic12D_2646 NC_012856.1 2790342 2791757 D KEGG: rso:RSc2811 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; signal recognition particle protein 2790342..2791757 Ralstonia pickettii 12D 8020310 YP_002982590.1 CDS Rpic12D_2647 NC_012856.1 2791825 2792373 D Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively; hypoxanthine-guanine phosphoribosyltransferase 2791825..2792373 Ralstonia pickettii 12D 8020311 YP_002982591.1 CDS Rpic12D_2648 NC_012856.1 2792439 2793032 R PFAM: multiple antibiotic resistance (MarC)-related protein; integral membrane protein TerC; KEGG: rso:RSc2813 hypothetical protein; multiple antibiotic resistance (MarC)-like protein complement(2792439..2793032) Ralstonia pickettii 12D 8020312 YP_002982592.1 CDS Rpic12D_2649 NC_012856.1 2793046 2793912 R KEGG: rso:RSc2814 hypothetical protein; PFAM: 2OG-Fe(II) oxygenase; SMART: prolyl 4-hydroxylase alpha subunit; procollagen-proline dioxygenase complement(2793046..2793912) Ralstonia pickettii 12D 8020313 YP_002982593.1 CDS Rpic12D_2650 NC_012856.1 2793979 2794740 R PFAM: Lytic transglycosylase catalytic; KEGG: rso:RSc2815 signal peptide protein; lytic transglycosylase catalytic subunit complement(2793979..2794740) Ralstonia pickettii 12D 8020314 YP_002982594.1 CDS Rpic12D_2651 NC_012856.1 2794764 2796488 R catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase complement(2794764..2796488) Ralstonia pickettii 12D 8020315 YP_002982595.1 CDS Rpic12D_2652 NC_012856.1 2796709 2797416 D hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 2796709..2797416 Ralstonia pickettii 12D 8020316 YP_002982596.1 CDS Rpic12D_2653 NC_012856.1 2797422 2798054 D PFAM: protein of unknown function CNP1-like; KEGG: rso:RSc2818 lipoprotein; hypothetical protein 2797422..2798054 Ralstonia pickettii 12D 8020317 YP_002982597.1 CDS Rpic12D_2654 NC_012856.1 2798149 2799273 R catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase complement(2798149..2799273) Ralstonia pickettii 12D 8020318 YP_002982598.1 CDS obgE NC_012856.1 2799307 2800401 R essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE complement(2799307..2800401) Ralstonia pickettii 12D 8020319 YP_002982599.1 CDS rpmA NC_012856.1 2800600 2800860 R involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 complement(2800600..2800860) Ralstonia pickettii 12D 8020320 YP_002982600.1 CDS rplU NC_012856.1 2800898 2801209 R TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; KEGG: rso:RSc2822 50S ribosomal protein L21; 50S ribosomal protein L21 complement(2800898..2801209) Ralstonia pickettii 12D 8020321 YP_002982601.1 CDS Rpic12D_2658 NC_012856.1 2801496 2802473 D PFAM: Polyprenyl synthetase; KEGG: rso:RSc2823 octaprenyl-diphosphate synthase; polyprenyl synthetase 2801496..2802473 Ralstonia pickettii 12D 8020322 YP_002982602.1 CDS Rpic12D_2659 NC_012856.1 2802749 2804344 D PFAM: integrase family protein; KEGG: bpd:BURPS668_3493 integrase; integrase family protein 2802749..2804344 Ralstonia pickettii 12D 8020324 YP_002982603.1 CDS Rpic12D_2660 NC_012856.1 2804558 2806735 R PFAM: protein of unknown function DUF262; KEGG: LOC100068152; similar to RAI14; hypothetical protein complement(2804558..2806735) Ralstonia pickettii 12D 8020325 YP_002982604.1 CDS Rpic12D_2661 NC_012856.1 2807072 2807452 D KEGG: reh:H16_A0824 hypothetical protein; hypothetical protein 2807072..2807452 Ralstonia pickettii 12D 8020326 YP_002982605.1 CDS Rpic12D_2662 NC_012856.1 2807540 2807728 R hypothetical protein complement(2807540..2807728) Ralstonia pickettii 12D 8020327 YP_002982606.1 CDS Rpic12D_2663 NC_012856.1 2807762 2808937 D KEGG: eba:ebA89 hypothetical protein; hypothetical protein 2807762..2808937 Ralstonia pickettii 12D 8020328 YP_002982607.1 CDS Rpic12D_2664 NC_012856.1 2809038 2809796 R KEGG: bte:BTH_I3243 hypothetical protein; hypothetical protein complement(2809038..2809796) Ralstonia pickettii 12D 8020329 YP_002982608.1 CDS Rpic12D_2665 NC_012856.1 2809821 2811542 R PFAM: UvrD/REP helicase; KEGG: mms:mma_1029 ATP-dependent DNA helicase; UvrD/REP helicase complement(2809821..2811542) Ralstonia pickettii 12D 8020330 YP_002982609.1 CDS Rpic12D_2666 NC_012856.1 2811544 2813205 R KEGG: mms:mma_1028 hypothetical protein; hypothetical protein complement(2811544..2813205) Ralstonia pickettii 12D 8020331 YP_002982610.1 CDS Rpic12D_2667 NC_012856.1 2813276 2813647 D PFAM: transposase IS3/IS911 family protein; KEGG: bxe:Bxe_B1867 hypothetical protein; transposase IS3/IS911 family protein 2813276..2813647 Ralstonia pickettii 12D 8020332 YP_002982611.1 CDS Rpic12D_2668 NC_012856.1 2813689 2813979 D PFAM: IS66 Orf2 family protein; KEGG: ajs:Ajs_2917 IS66 Orf2 family protein; IS66 Orf2 family protein 2813689..2813979 Ralstonia pickettii 12D 8020333 YP_002982612.1 CDS Rpic12D_2669 NC_012856.1 2814042 2815571 D PFAM: transposase IS66; KEGG: bcm:Bcenmc03_6939 transposase IS66; transposase IS66 2814042..2815571 Ralstonia pickettii 12D 8020334 YP_002982613.1 CDS Rpic12D_2670 NC_012856.1 2815797 2819717 R KEGG: mgm:Mmc1_2017 type II DNA modification enzyme; type II DNA modification enzyme complement(2815797..2819717) Ralstonia pickettii 12D 8020335 YP_002982614.1 CDS Rpic12D_2671 NC_012856.1 2819749 2822598 R PFAM: helicase domain protein; SNF2-related protein; SMART: DEAD-like helicases ; helicase domain protein; KEGG: mgm:Mmc1_2016 helicase domain protein; helicase domain-containing protein complement(2819749..2822598) Ralstonia pickettii 12D 8020336 YP_002982615.1 CDS Rpic12D_2672 NC_012856.1 2822604 2827916 R PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicases ; helicase domain protein; KEGG: hch:HCH_03804 helicase family protein; DEAD/DEAH box helicase complement(2822604..2827916) Ralstonia pickettii 12D 8020337 YP_002982616.1 CDS Rpic12D_2673 NC_012856.1 2828331 2829041 R hypothetical protein complement(2828331..2829041) Ralstonia pickettii 12D 8020338 YP_002982617.1 CDS Rpic12D_2674 NC_012856.1 2830205 2832145 D KEGG: bps:BPSL0949 hypothetical protein; hypothetical protein 2830205..2832145 Ralstonia pickettii 12D 8020339 YP_002982618.1 CDS Rpic12D_2675 NC_012856.1 2832305 2833099 R KEGG: abb:ABBFA_000724 hypothetical protein; hypothetical protein complement(2832305..2833099) Ralstonia pickettii 12D 8020340 YP_002982619.1 CDS Rpic12D_2676 NC_012856.1 2833134 2833715 R KEGG: esa:ESA_03895 hypothetical protein; hypothetical protein complement(2833134..2833715) Ralstonia pickettii 12D 8020341 YP_002982620.1 CDS Rpic12D_2677 NC_012856.1 2833891 2834646 R PFAM: protein of unknown function DUF1311; KEGG: atc:AGR_C_4360 hypothetical protein; hypothetical protein complement(2833891..2834646) Ralstonia pickettii 12D 8020342 YP_002982621.1 CDS Rpic12D_2678 NC_012856.1 2834900 2835148 R hypothetical protein complement(2834900..2835148) Ralstonia pickettii 12D 8020343 YP_002982622.1 CDS Rpic12D_2679 NC_012856.1 2835442 2835852 R hypothetical protein complement(2835442..2835852) Ralstonia pickettii 12D 8020344 YP_002982623.1 CDS Rpic12D_2680 NC_012856.1 2835947 2836336 R KEGG: bac:BamMC406_5360 hypothetical protein; hypothetical protein complement(2835947..2836336) Ralstonia pickettii 12D 8020345 YP_002982624.1 CDS Rpic12D_2681 NC_012856.1 2836333 2836989 R KEGG: vei:Veis_0261 hypothetical protein; hypothetical protein complement(2836333..2836989) Ralstonia pickettii 12D 8020346 YP_002982625.1 CDS Rpic12D_2682 NC_012856.1 2836994 2837533 R KEGG: ecv:APECO1_3013 hypothetical protein; hypothetical protein complement(2836994..2837533) Ralstonia pickettii 12D 8020347 YP_002982626.1 CDS Rpic12D_2683 NC_012856.1 2838142 2838639 R hypothetical protein complement(2838142..2838639) Ralstonia pickettii 12D 8020348 YP_002982627.1 CDS Rpic12D_2684 NC_012856.1 2838632 2838868 R hypothetical protein complement(2838632..2838868) Ralstonia pickettii 12D 8020349 YP_002982628.1 CDS Rpic12D_2685 NC_012856.1 2839044 2840201 D KEGG: eta:ETA_03340 GTP-binding protein; hypothetical protein 2839044..2840201 Ralstonia pickettii 12D 8020350 YP_002982629.1 CDS Rpic12D_2686 NC_012856.1 2840226 2840327 R hypothetical protein complement(2840226..2840327) Ralstonia pickettii 12D 8020351 YP_002982630.1 CDS Rpic12D_2687 NC_012856.1 2840408 2841037 D hypothetical protein 2840408..2841037 Ralstonia pickettii 12D 8020352 YP_002982631.1 CDS Rpic12D_2688 NC_012856.1 2841322 2841609 R KEGG: bpa:BPP1301 DNA-binding protein; DNA-binding protein complement(2841322..2841609) Ralstonia pickettii 12D 8020353 YP_002982632.1 CDS Rpic12D_2689 NC_012856.1 2841643 2841861 R hypothetical protein complement(2841643..2841861) Ralstonia pickettii 12D 8020354 YP_002982633.1 CDS Rpic12D_2690 NC_012856.1 2842005 2842145 D hypothetical protein 2842005..2842145 Ralstonia pickettii 12D 8020355 YP_002982634.1 CDS Rpic12D_2691 NC_012856.1 2842288 2843430 R KEGG: bma:BMA1027 outer membrane protein; hypothetical protein complement(2842288..2843430) Ralstonia pickettii 12D 8020356 YP_002982635.1 CDS Rpic12D_2692 NC_012856.1 2843535 2844236 R hypothetical protein complement(2843535..2844236) Ralstonia pickettii 12D 8020357 YP_002982636.1 CDS Rpic12D_2693 NC_012856.1 2844317 2844514 R KEGG: bps:BPSL0552 hypothetical protein; hypothetical protein complement(2844317..2844514) Ralstonia pickettii 12D 8020358 YP_002982637.1 CDS Rpic12D_2694 NC_012856.1 2844538 2844768 R KEGG: pna:Pnap_4940 filamentation induced by cAMP protein Fic; filamentation induced by cAMP protein fic complement(2844538..2844768) Ralstonia pickettii 12D 8020359 YP_002982638.1 CDS Rpic12D_2695 NC_012856.1 2844835 2845407 R KEGG: Os02g0235900; hypothetical protein; hypothetical protein complement(2844835..2845407) Ralstonia pickettii 12D 8020360 YP_002982639.1 CDS Rpic12D_2696 NC_012856.1 2846095 2846448 D PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bte:BTH_I2733 helix-turn-helix domain-containing protein; XRE family transcriptional regulator 2846095..2846448 Ralstonia pickettii 12D 8020361 YP_002982640.1 CDS Rpic12D_2697 NC_012856.1 2846904 2847617 D hypothetical protein 2846904..2847617 Ralstonia pickettii 12D 8020362 YP_002982641.1 CDS Rpic12D_2698 NC_012856.1 2848577 2849026 R KEGG: reu:Reut_C5923 hypothetical protein; hypothetical protein complement(2848577..2849026) Ralstonia pickettii 12D 8020363 YP_002982642.1 CDS Rpic12D_2699 NC_012856.1 2849084 2849593 R KEGG: reh:H16_A0824 hypothetical protein; hypothetical protein complement(2849084..2849593) Ralstonia pickettii 12D 8020364 YP_002982643.1 CDS Rpic12D_2700 NC_012856.1 2850069 2850278 D hypothetical protein 2850069..2850278 Ralstonia pickettii 12D 8020365 YP_002982644.1 CDS Rpic12D_2701 NC_012856.1 2850661 2850915 D hypothetical protein 2850661..2850915 Ralstonia pickettii 12D 8020366 YP_002982645.1 CDS Rpic12D_2702 NC_012856.1 2851009 2851284 D hypothetical protein 2851009..2851284 Ralstonia pickettii 12D 8020367 YP_002982646.1 CDS Rpic12D_2703 NC_012856.1 2851774 2852223 R TIGRFAM: DNA binding domain protein, excisionase family; KEGG: xau:Xaut_2867 transcriptional regulator; excisionase family DNA binding domain-containing protein complement(2851774..2852223) Ralstonia pickettii 12D 8020368 YP_002982647.1 CDS Rpic12D_2704 NC_012856.1 2853005 2854279 D PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: rso:RSc2824 hypothetical protein; hypothetical protein 2853005..2854279 Ralstonia pickettii 12D 8020369 YP_002982648.1 CDS Rpic12D_2705 NC_012856.1 2854539 2856266 D TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; general secretory system II protein E domain protein; KEGG: rso:RSc2825 type IV pilus assembly protein; type IV-A pilus assembly ATPase PilB 2854539..2856266 Ralstonia pickettii 12D 8020370 YP_002982649.1 CDS Rpic12D_2706 NC_012856.1 2856311 2857573 D PFAM: type II secretion system protein; KEGG: rso:RSc2826 fimbrial assembly transmembrane protein; type II secretion system protein 2856311..2857573 Ralstonia pickettii 12D 8020371 YP_002982650.1 CDS Rpic12D_2707 NC_012856.1 2857578 2858459 D PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; KEGG: rso:RSc2827 type 4 prepilin peptidase bifunctionnal: leader peptidase and N-methyltransferase transmembrane protein; prepilin peptidase 2857578..2858459 Ralstonia pickettii 12D 8020372 YP_002982651.1 CDS coaE NC_012856.1 2858473 2859087 D catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 2858473..2859087 Ralstonia pickettii 12D 8020373 YP_002982652.1 CDS Rpic12D_2709 NC_012856.1 2859223 2859981 D PFAM: protein of unknown function DUF1342; KEGG: rso:RSc2829 hypothetical protein; hypothetical protein 2859223..2859981 Ralstonia pickettii 12D 8020374 YP_002982653.1 CDS Rpic12D_2710 NC_012856.1 2859990 2860193 D PFAM: protein of unknown function DUF329; KEGG: rso:RSc2830 hypothetical protein; hypothetical protein 2859990..2860193 Ralstonia pickettii 12D 8020375 YP_002982654.1 CDS Rpic12D_2711 NC_012856.1 2860186 2860635 R PFAM: NUDIX hydrolase; KEGG: rso:RSc2831 7,8-dihydro-8-oxoguanine-triphosphatase; NUDIX hydrolase complement(2860186..2860635) Ralstonia pickettii 12D 8020376 YP_002982655.1 CDS Rpic12D_2712 NC_012856.1 2860625 2861509 R PFAM: protein of unknown function DUF815; SMART: AAA ATPase; KEGG: rso:RSc2832 hypothetical protein; hypothetical protein complement(2860625..2861509) Ralstonia pickettii 12D 8020377 YP_002982656.1 CDS argJ NC_012856.1 2861526 2862755 R bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase complement(2861526..2862755) Ralstonia pickettii 12D 8020378 YP_002982657.1 CDS Rpic12D_2714 NC_012856.1 2862829 2865633 R functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA complement(2862829..2865633) Ralstonia pickettii 12D 8020379 YP_002982658.1 CDS Rpic12D_2715 NC_012856.1 2865884 2866846 R PFAM: peptidase M23; KEGG: rso:RSc2835 transmembrane protein; peptidase M23 complement(2865884..2866846) Ralstonia pickettii 12D 8020380 YP_002982659.1 CDS Rpic12D_2716 NC_012856.1 2866917 2867438 D PFAM: protein of unknown function DUF721; KEGG: rso:RSc2836 hypothetical protein; hypothetical protein 2866917..2867438 Ralstonia pickettii 12D 8020381 YP_002982660.1 CDS lpxC NC_012856.1 2867487 2868404 R zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase complement(2867487..2868404) Ralstonia pickettii 12D 8020382 YP_002982661.1 CDS Rpic12D_2718 NC_012856.1 2868649 2869149 R PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: rso:RSc2838 type 2 peroxiredoxin protein; redoxin domain-containing protein complement(2868649..2869149) Ralstonia pickettii 12D 8020383 YP_002982662.1 CDS Rpic12D_2719 NC_012856.1 2869541 2870740 R GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ complement(2869541..2870740) Ralstonia pickettii 12D 8020384 YP_002982663.1 CDS Rpic12D_2720 NC_012856.1 2870882 2872114 R TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA; KEGG: rso:RSc2840 cell division protein FtsA; cell division protein FtsA complement(2870882..2872114) Ralstonia pickettii 12D 8020385 YP_002982664.1 CDS Rpic12D_2721 NC_012856.1 2872111 2873022 R PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: rso:RSc2841 cell division transmembrane protein; cell division protein FtsQ complement(2872111..2873022) Ralstonia pickettii 12D 8020386 YP_002982665.1 CDS ddl NC_012856.1 2873060 2874055 R D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase complement(2873060..2874055) Ralstonia pickettii 12D 8020387 YP_002982666.1 CDS murC NC_012856.1 2874052 2875503 R Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase complement(2874052..2875503) Ralstonia pickettii 12D 8020388 YP_002982667.1 CDS murG NC_012856.1 2875517 2876617 R UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase complement(2875517..2876617) Ralstonia pickettii 12D 8020389 YP_002982668.1 CDS Rpic12D_2725 NC_012856.1 2876614 2877855 R TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: rso:RSc2845 cell division FtsW transmembrane protein; cell division protein FtsW complement(2876614..2877855) Ralstonia pickettii 12D 8020390 YP_002982669.1 CDS murD NC_012856.1 2877852 2879489 R UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase complement(2877852..2879489) Ralstonia pickettii 12D 8020391 YP_002982670.1 CDS mraY NC_012856.1 2879498 2880667 R First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(2879498..2880667) Ralstonia pickettii 12D 8020392 YP_002982671.1 CDS Rpic12D_2728 NC_012856.1 2880683 2882119 R TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: rso:RSc2848 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase protein; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase complement(2880683..2882119) Ralstonia pickettii 12D 8020393 YP_002982672.1 CDS murE NC_012856.1 2882116 2883660 R involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase complement(2882116..2883660) Ralstonia pickettii 12D 8020394 YP_002982673.1 CDS Rpic12D_2730 NC_012856.1 2883657 2885444 R PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: rso:RSc2850 penicillin-binding 3 precursor PBP-3 transmembrane protein; peptidoglycan glycosyltransferase complement(2883657..2885444) Ralstonia pickettii 12D 8020395 YP_002982674.1 CDS Rpic12D_2731 NC_012856.1 2885441 2885785 R TIGRFAM: cell division protein FtsL; PFAM: cell division protein FtsL; KEGG: rso:RSc2851 cell division FtsL transmembrane protein; cell division protein FtsL complement(2885441..2885785) Ralstonia pickettii 12D 8020396 YP_002982675.1 CDS mraW NC_012856.1 2885814 2886773 R TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: rso:RSc2852 S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW complement(2885814..2886773) Ralstonia pickettii 12D 8020397 YP_002982676.1 CDS Rpic12D_2733 NC_012856.1 2886783 2887211 R MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ complement(2886783..2887211) Ralstonia pickettii 12D 8020398 YP_002982677.1 CDS Rpic12D_2734 NC_012856.1 2887593 2888246 R KEGG: rso:RSc2854 hypothetical protein; hypothetical protein complement(2887593..2888246) Ralstonia pickettii 12D 8020399 YP_002982678.1 CDS Rpic12D_2735 NC_012856.1 2888627 2889805 D PFAM: porin Gram-negative type; KEGG: rso:RSc2855 outer membrane porin signal peptide protein; porin 2888627..2889805 Ralstonia pickettii 12D 8020400 YP_002982679.1 CDS Rpic12D_2736 NC_012856.1 2889991 2891307 D TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: rso:RSc2856 metabolite transport protein; major facilitator superfamily metabolite/H+ symporter 2889991..2891307 Ralstonia pickettii 12D 8020401 YP_002982680.1 CDS Rpic12D_2737 NC_012856.1 2891252 2891761 R PFAM: Class I peptide chain release factor; KEGG: sml:Smlt0221 peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase domain-containing protein complement(2891252..2891761) Ralstonia pickettii 12D 8020402 YP_002982681.1 CDS Rpic12D_2738 NC_012856.1 2891805 2892422 D TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: reu:Reut_B5210 HylII; hemolysin III family channel protein 2891805..2892422 Ralstonia pickettii 12D 8020403 YP_002982682.1 CDS Rpic12D_2739 NC_012856.1 2892500 2894209 R activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase complement(2892500..2894209) Ralstonia pickettii 12D 8020404 YP_002982683.1 CDS Rpic12D_2740 NC_012856.1 2894359 2895456 R KEGG: rso:RSc2858 zinc protease protein; zinc protease protein complement(2894359..2895456) Ralstonia pickettii 12D 8020405 YP_002982684.1 CDS Rpic12D_2741 NC_012856.1 2895467 2897563 R PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: rso:RSc2859 oxidoreductase protein; molybdopterin oxidoreductase complement(2895467..2897563) Ralstonia pickettii 12D 8020406 YP_002982685.1 CDS Rpic12D_2742 NC_012856.1 2897646 2898641 R KEGG: rso:RSc2860 transcription regulation repressor transcription regulator protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; LacI family transcriptional regulator complement(2897646..2898641) Ralstonia pickettii 12D 8020407 YP_002982686.1 CDS Rpic12D_2743 NC_012856.1 2898859 2901399 D TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; phosphocarrier, HPr family; PFAM: PEP-utilizing protein; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; PEP-utilising protein mobile region; PEP-utilising protein domain protein; phosphoryl transfer system HPr; KEGG: rso:RSc2861 multiphosphoryl transfer protein; phosphoenolpyruvate-protein phosphotransferase 2898859..2901399 Ralstonia pickettii 12D 8020408 YP_002982687.1 CDS Rpic12D_2744 NC_012856.1 2901396 2902352 D KEGG: rso:RSc2862 1-phosphofructokinase protein; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; 1-phosphofructokinase 2901396..2902352 Ralstonia pickettii 12D 8020409 YP_002982688.1 CDS Rpic12D_2745 NC_012856.1 2902402 2904117 D TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose-specific IIB subunit; phosphotransferase system EIIC; KEGG: rso:RSc2863 PTS system, fructose-specific IIBC component (EIIBC-fru) (fructose-permease IIBC component) transmembrane protein; PTS system fructose subfamily transporter subunit IIC 2902402..2904117 Ralstonia pickettii 12D 8020410 YP_002982689.1 CDS Rpic12D_2746 NC_012856.1 2904265 2905422 D PFAM: extracellular ligand-binding receptor; KEGG: rso:RSc2864 Leu/Ile/Val-binding signal peptide protein; extracellular ligand-binding receptor 2904265..2905422 Ralstonia pickettii 12D 8020411 YP_002982690.1 CDS Rpic12D_2747 NC_012856.1 2905475 2906677 R TIGRFAM: acetylornithine deacetylase (ArgE); PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: pol:Bpro_2527 Acetylornithine deacetylase / acetylornithine deacetylase ArgE. Metallo peptidase. MEROPS family M20A; acetylornithine deacetylase ArgE complement(2905475..2906677) Ralstonia pickettii 12D 8020412 YP_002982691.1 CDS Rpic12D_2748 NC_012856.1 2906944 2908134 D KEGG: rso:RSc2871 hippurate hydrolase protein; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 2906944..2908134 Ralstonia pickettii 12D 8020413 YP_002982692.1 CDS Rpic12D_2749 NC_012856.1 2914084 2914860 R Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase complement(2914084..2914860) Ralstonia pickettii 12D 8020420 YP_002982693.1 CDS Rpic12D_2750 NC_012856.1 2914944 2915732 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 2914944..2915732 Ralstonia pickettii 12D 8020421 YP_002982694.1 CDS Rpic12D_2751 NC_012856.1 2915743 2916204 D TIGRFAM: phenylacetic acid degradation protein PaaD; PFAM: thioesterase superfamily protein; KEGG: rso:RSc2874 phenylacetic acid degradation protein; phenylacetic acid degradation protein PaaD 2915743..2916204 Ralstonia pickettii 12D 8020422 YP_002982695.1 CDS Rpic12D_2752 NC_012856.1 2916408 2917712 D TIGRFAM: phenylacetate-CoA ligase; KEGG: rso:RSc2875 phenylacetyl-CoA-ligase protein; phenylacetate-CoA ligase 2916408..2917712 Ralstonia pickettii 12D 8020423 YP_002982696.1 CDS Rpic12D_2753 NC_012856.1 2917725 2918879 R PFAM: MltA domain protein; 3D domain protein; KEGG: rso:RSc2876 membrane-bound lytic murein transglycosylase A transmembrane protein; MltA domain-containing protein complement(2917725..2918879) Ralstonia pickettii 12D 8020424 YP_002982697.1 CDS Rpic12D_2754 NC_012856.1 2918954 2919187 D KEGG: rso:RSc2877 hypothetical protein; hypothetical protein 2918954..2919187 Ralstonia pickettii 12D 8020425 YP_002982698.1 CDS apaG NC_012856.1 2919195 2919569 R protein associated with Co2+ and Mg2+ efflux; ApaG protein complement(2919195..2919569) Ralstonia pickettii 12D 8020426 YP_002982699.1 CDS Rpic12D_2756 NC_012856.1 2919713 2920438 D catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase 2919713..2920438 Ralstonia pickettii 12D 8020427 YP_002982700.1 CDS Rpic12D_2757 NC_012856.1 2920435 2921166 D TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rso:RSc2880 phosphoglycolate phosphatase; phosphoglycolate phosphatase 2920435..2921166 Ralstonia pickettii 12D 8020428 YP_002982701.1 CDS Rpic12D_2758 NC_012856.1 2921569 2923101 D with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 2921569..2923101 Ralstonia pickettii 12D 8020429 YP_002982702.1 CDS Rpic12D_2759 NC_012856.1 2923118 2923687 D TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II 2923118..2923687 Ralstonia pickettii 12D 8020430 YP_002982703.1 CDS Rpic12D_2760 NC_012856.1 2923687 2924130 D KEGG: rso:RSc2883 signal peptide protein; signal peptide protein 2923687..2924130 Ralstonia pickettii 12D 8020431 YP_002982704.1 CDS trpD NC_012856.1 2924144 2925181 D Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 2924144..2925181 Ralstonia pickettii 12D 8020432 YP_002982705.1 CDS trpC NC_012856.1 2925183 2925986 D involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase 2925183..2925986 Ralstonia pickettii 12D 8020433 YP_002982706.1 CDS Rpic12D_2763 NC_012856.1 2925997 2926656 D PFAM: adenylate cyclase; KEGG: rso:RSc2886 hypothetical protein; adenylate cyclase 2925997..2926656 Ralstonia pickettii 12D 8020434 YP_002982707.1 CDS Rpic12D_2764 NC_012856.1 2926653 2927444 D Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 2926653..2927444 Ralstonia pickettii 12D 8020435 YP_002982708.1 CDS Rpic12D_2765 NC_012856.1 2927837 2930053 R PFAM: protein of unknown function DUF893 YccS/YhfK; KEGG: rso:RSc2889 hypothetical protein; hypothetical protein complement(2927837..2930053) Ralstonia pickettii 12D 8020436 YP_002982709.1 CDS Rpic12D_2766 NC_012856.1 2930065 2931936 R PFAM: peptidase M61 domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: rso:RSc2890 hypothetical protein; peptidase M61 domain-containing protein complement(2930065..2931936) Ralstonia pickettii 12D 8020437 YP_002982710.1 CDS Rpic12D_2767 NC_012856.1 2931995 2933011 R TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: rso:RSc2891 oxidoreductase protein; YhdH/YhfP family quinone oxidoreductase complement(2931995..2933011) Ralstonia pickettii 12D 8020438 YP_002982711.1 CDS Rpic12D_2768 NC_012856.1 2933090 2933836 R KEGG: rso:RSc2892 thiol:disulfide interchange protein; thiol:disulfide interchange protein complement(2933090..2933836) Ralstonia pickettii 12D 8020439 YP_002982712.1 CDS Rpic12D_2769 NC_012856.1 2933883 2935178 R TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; KEGG: rso:RSc2893 hypothetical protein; ubiquinone biosynthesis hydroxylase family protein complement(2933883..2935178) Ralstonia pickettii 12D 8020440 YP_002982713.1 CDS Rpic12D_2770 NC_012856.1 2935542 2935931 D KEGG: rso:RSc2894 hypothetical protein; hypothetical protein 2935542..2935931 Ralstonia pickettii 12D 8020441 YP_002982714.1 CDS Rpic12D_2771 NC_012856.1 2935942 2936280 D KEGG: rso:RSc2895 signal peptide protein; signal peptide protein 2935942..2936280 Ralstonia pickettii 12D 8020442 YP_002982715.1 CDS Rpic12D_2772 NC_012856.1 2936305 2936778 D PFAM: Lytic transglycosylase catalytic; KEGG: rso:RSc2896 hypothetical protein; lytic transglycosylase catalytic subunit 2936305..2936778 Ralstonia pickettii 12D 8020443 YP_002982716.1 CDS Rpic12D_2773 NC_012856.1 2936810 2937187 R PFAM: flagellar export chaperone; KEGG: rso:RSc2897 hypothetical protein; flagellar export chaperone complement(2936810..2937187) Ralstonia pickettii 12D 8020444 YP_002982717.1 CDS Rpic12D_2774 NC_012856.1 2937598 2938689 D translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 2937598..2938689 Ralstonia pickettii 12D 8020445 YP_002982718.1 CDS Rpic12D_2775 NC_012856.1 2938769 2940190 D KEGG: bpy:Bphyt_7324 integrase family protein; integrase family protein 2938769..2940190 Ralstonia pickettii 12D 8020446 YP_002982719.1 CDS Rpic12D_2776 NC_012856.1 2940238 2942055 D KEGG: reh:PHG054 hypothetical protein; hypothetical protein 2940238..2942055 Ralstonia pickettii 12D 8020447 YP_002982720.1 CDS Rpic12D_2777 NC_012856.1 2942536 2944131 D KEGG: bph:Bphy_7605 hypothetical protein; hypothetical protein 2942536..2944131 Ralstonia pickettii 12D 8020448 YP_002982721.1 CDS Rpic12D_2778 NC_012856.1 2944128 2944505 D KEGG: reh:PHG052 hypothetical protein; hypothetical protein 2944128..2944505 Ralstonia pickettii 12D 8020449 YP_002982722.1 CDS Rpic12D_2779 NC_012856.1 2945239 2946570 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: bmj:BMULJ_03712 phthalate dioxygenase oxygenase; Rieske (2Fe-2S) domain-containing protein 2945239..2946570 Ralstonia pickettii 12D 8020450 YP_002982723.1 CDS Rpic12D_2780 NC_012856.1 2946574 2947761 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bmu:Bmul_4806 oxidoreductase domain-containing protein; oxidoreductase domain-containing protein 2946574..2947761 Ralstonia pickettii 12D 8020451 YP_002982724.1 CDS Rpic12D_2781 NC_012856.1 2947852 2948697 R KEGG: bmu:Bmul_4808 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase complement(2947852..2948697) Ralstonia pickettii 12D 8020452 YP_002982725.1 CDS Rpic12D_2782 NC_012856.1 2948821 2949399 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bmu:Bmul_4809 MarR family transcriptional regulator; MarR family transcriptional regulator complement(2948821..2949399) Ralstonia pickettii 12D 8020453 YP_002982726.1 CDS Rpic12D_2783 NC_012856.1 2949495 2950559 R PFAM: porin Gram-negative type; KEGG: bmj:BMULJ_03732 outer membrane porin; porin complement(2949495..2950559) Ralstonia pickettii 12D 8020454 YP_002982727.1 CDS Rpic12D_2784 NC_012856.1 2950665 2951657 R KEGG: bmj:BMULJ_03707 4,5-dihydroxyphthalate decarboxylase; 4,5-dihydroxyphthalate decarboxylase complement(2950665..2951657) Ralstonia pickettii 12D 8020455 YP_002982728.1 CDS Rpic12D_2785 NC_012856.1 2951703 2953049 R TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1; KEGG: bvi:Bcep1808_4267 D-galactonate transporter; d-galactonate transporter complement(2951703..2953049) Ralstonia pickettii 12D 8020456 YP_002982729.1 CDS Rpic12D_2786 NC_012856.1 2953315 2954277 D PFAM: ferredoxin; oxidoreductase FAD-binding protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: bmj:BMULJ_03705 FAD/NAD(P)-binding oxidoreductase; ferredoxin 2953315..2954277 Ralstonia pickettii 12D 8020457 YP_002982730.1 CDS Rpic12D_2787 NC_012856.1 2954321 2954818 D TIGRFAM: hemerythrin-like metal-binding protein; PFAM: hemerythrin HHE cation-binding protein; KEGG: bxe:Bxe_A3521 hypothetical protein; hemerythrin-like metal-binding protein 2954321..2954818 Ralstonia pickettii 12D 8020458 YP_002982731.1 CDS Rpic12D_2788 NC_012856.1 2955226 2955738 R KEGG: bac:BamMC406_6697 hypothetical protein; hypothetical protein complement(2955226..2955738) Ralstonia pickettii 12D 8020459 YP_002982732.1 CDS Rpic12D_2789 NC_012856.1 2955749 2956255 R KEGG: bsu:BSU20890 hypothetical protein; hypothetical protein complement(2955749..2956255) Ralstonia pickettii 12D 8020460 YP_002982733.1 CDS Rpic12D_2790 NC_012856.1 2956276 2956425 R hypothetical protein complement(2956276..2956425) Ralstonia pickettii 12D 8020461 YP_002982734.1 CDS Rpic12D_2791 NC_012856.1 2956713 2958746 D KEGG: bch:Bcen2424_0206 ATP-dependent OLD family endonuclease; ATP-dependent OLD family endonuclease 2956713..2958746 Ralstonia pickettii 12D 8020462 YP_002982735.1 CDS Rpic12D_2792 NC_012856.1 2958728 2960485 D KEGG: gbe:GbCGDNIH1_1179 DNA helicase II; DNA helicase II 2958728..2960485 Ralstonia pickettii 12D 8020463 YP_002982736.1 CDS Rpic12D_2793 NC_012856.1 2961084 2963375 D PFAM: ATP-binding region ATPase domain protein; PAS fold-2 domain protein; Phytochrome central region domain protein; GAF domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; KEGG: bpy:Bphyt_1284 multi-sensor signal transduction histidine kinase; multi-sensor signal transduction histidine kinase 2961084..2963375 Ralstonia pickettii 12D 8020464 YP_002982737.1 CDS Rpic12D_2794 NC_012856.1 2963402 2963869 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: ppw:PputW619_1795 response regulator receiver protein; response regulator receiver protein 2963402..2963869 Ralstonia pickettii 12D 8020465 YP_002982738.1 CDS Rpic12D_2795 NC_012856.1 2963895 2965853 D KEGG: bph:Bphy_0992 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; PAS domain containing protein; PAS/PAC sensor hybrid histidine kinase 2963895..2965853 Ralstonia pickettii 12D 8020466 YP_002982739.1 CDS Rpic12D_2796 NC_012856.1 2965887 2966129 R KEGG: rso:RSc2899 hypothetical protein; hypothetical protein complement(2965887..2966129) Ralstonia pickettii 12D 8020467 YP_002982740.1 CDS hemA NC_012856.1 2966350 2967657 D catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 2966350..2967657 Ralstonia pickettii 12D 8020468 YP_002982741.1 CDS prfA NC_012856.1 2967766 2968848 D recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 2967766..2968848 Ralstonia pickettii 12D 8020469 YP_002982742.1 CDS Rpic12D_2799 NC_012856.1 2969031 2969399 D KEGG: rso:RSc2902 lipoprotein; lipoprotein 2969031..2969399 Ralstonia pickettii 12D 8020470 YP_002982743.1 CDS Rpic12D_2800 NC_012856.1 2969497 2970399 D TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: rso:RSc2903 methyltransferase protein; HemK family modification methylase 2969497..2970399 Ralstonia pickettii 12D 8020471 YP_002982744.1 CDS Rpic12D_2801 NC_012856.1 2970468 2970779 D TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: rso:RSc2904 hypothetical protein; glutaredoxin-like protein 2970468..2970779 Ralstonia pickettii 12D 8020472 YP_002982745.1 CDS Rpic12D_2802 NC_012856.1 2970799 2971422 D catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 2970799..2971422 Ralstonia pickettii 12D 8020473 YP_002982746.1 CDS Rpic12D_2803 NC_012856.1 2971445 2971615 R KEGG: rso:RSc2906 hypothetical protein; hypothetical protein complement(2971445..2971615) Ralstonia pickettii 12D 8020474 YP_002982747.1 CDS Rpic12D_2804 NC_012856.1 2971737 2972477 R KEGG: rso:RSc2907 signal peptide protein; signal peptide protein complement(2971737..2972477) Ralstonia pickettii 12D 8020475 YP_002982748.1 CDS mdoG NC_012856.1 2972782 2974374 D involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G 2972782..2974374 Ralstonia pickettii 12D 8020476 YP_002982749.1 CDS Rpic12D_2806 NC_012856.1 2974347 2976929 D necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH 2974347..2976929 Ralstonia pickettii 12D 8020477 YP_002982750.1 CDS Rpic12D_2807 NC_012856.1 2977124 2977447 D KEGG: rso:RSc2910 signal peptide protein; signal peptide protein 2977124..2977447 Ralstonia pickettii 12D 8020478 YP_002982751.1 CDS Rpic12D_2808 NC_012856.1 2977609 2978097 D PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: rso:RSc2911 hypothetical protein; YbaK/prolyl-tRNA synthetase associated domain-containing protein 2977609..2978097 Ralstonia pickettii 12D 8020479 YP_002982752.1 CDS Rpic12D_2809 NC_012856.1 2978107 2978331 D SMART: zinc finger CDGSH-type domain protein; KEGG: rso:RSc2912 hypothetical protein; zinc finger CDGSH-type domain-containing protein 2978107..2978331 Ralstonia pickettii 12D 8020480 YP_002982753.1 CDS Rpic12D_2810 NC_012856.1 2978328 2979995 R ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; ABC transporter ATP-binding protein complement(2978328..2979995) Ralstonia pickettii 12D 8020481 YP_002982754.1 CDS Rpic12D_2811 NC_012856.1 2980144 2980512 R TIGRFAM: cytochrome O ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: rso:RSc2914 transmembrane cytochrome O ubiquinol oxidase subunit IV; cytochrome O ubiquinol oxidase subunit IV complement(2980144..2980512) Ralstonia pickettii 12D 8020482 YP_002982755.1 CDS Rpic12D_2812 NC_012856.1 2980512 2981153 R TIGRFAM: cytochrome O ubiquinol oxidase, subunit III; PFAM: cytochrome C oxidase subunit III; KEGG: rso:RSc2915 transmembrane cytochrome O ubiquinol oxidase (subunit III) oxidoreductase protein; cytochrome o ubiquinol oxidase subunit III complement(2980512..2981153) Ralstonia pickettii 12D 8020483 YP_002982756.1 CDS Rpic12D_2813 NC_012856.1 2981157 2983136 R KEGG: rso:RSc2916 transmembrane cytochrome O ubiquinol oxidase subunit I; TIGRFAM: cytochrome O ubiquinol oxidase, subunit I; PFAM: cytochrome C oxidase subunit I; cytochrome o ubiquinol oxidase subunit I complement(2981157..2983136) Ralstonia pickettii 12D 8020484 YP_002982757.1 CDS Rpic12D_2814 NC_012856.1 2983146 2984168 R TIGRFAM: ubiquinol oxidase, subunit II; PFAM: COX aromatic rich domain protein; cytochrome C oxidase subunit II; KEGG: rso:RSc2917 transmembrane cytochrome O ubiquinol oxidase subunit II; ubiquinol oxidase subunit II complement(2983146..2984168) Ralstonia pickettii 12D 8020485 YP_002982758.1 CDS Rpic12D_2815 NC_012856.1 2984578 2984718 R hypothetical protein complement(2984578..2984718) Ralstonia pickettii 12D 8020486 YP_002982759.1 CDS Rpic12D_2816 NC_012856.1 2984765 2986408 R PFAM: natural resistance-associated macrophage protein; KEGG: rso:RSp0027 manganese transport transmembrane protein; natural resistance-associated macrophage protein complement(2984765..2986408) Ralstonia pickettii 12D 8020487 YP_002982760.1 CDS Rpic12D_2817 NC_012856.1 2986455 2986661 R KEGG: rso:RS02001 hypothetical protein; hypothetical protein complement(2986455..2986661) Ralstonia pickettii 12D 8020488 YP_002982761.1 CDS Rpic12D_2819 NC_012856.1 2987280 2987603 D PFAM: transposase IS3/IS911 family protein; KEGG: ajs:Ajs_0906 transposase IS3/IS911 family protein; transposase IS3/IS911 family protein 2987280..2987603 Ralstonia pickettii 12D 8020490 YP_002982762.1 CDS Rpic12D_2820 NC_012856.1 2987600 2988514 D PFAM: integrase catalytic region; KEGG: ajs:Ajs_0907 integrase catalytic subunit; Integrase catalytic subunit 2987600..2988514 Ralstonia pickettii 12D 8020491 YP_002982763.1 CDS Rpic12D_2821 NC_012856.1 2990432 2990656 D KEGG: bur:Bcep18194_A4496 hypothetical protein; hypothetical protein 2990432..2990656 Ralstonia pickettii 12D 8020492 YP_002982764.1 CDS Rpic12D_2822 NC_012856.1 2990964 2991257 R hypothetical protein complement(2990964..2991257) Ralstonia pickettii 12D 8020493 YP_002982765.1 CDS Rpic12D_2823 NC_012856.1 2991373 2992083 R hypothetical protein complement(2991373..2992083) Ralstonia pickettii 12D 8020494 YP_002982766.1 CDS Rpic12D_2824 NC_012856.1 2992335 2992856 R hypothetical protein complement(2992335..2992856) Ralstonia pickettii 12D 8020495 YP_002982767.1 CDS Rpic12D_2825 NC_012856.1 2993058 2993792 R KEGG: pfo:Pfl01_2418 hypothetical protein; hypothetical protein complement(2993058..2993792) Ralstonia pickettii 12D 8020496 YP_002982768.1 CDS Rpic12D_2826 NC_012856.1 2994427 2994768 D hypothetical protein 2994427..2994768 Ralstonia pickettii 12D 8020497 YP_002982769.1 CDS Rpic12D_2827 NC_012856.1 2994779 2995072 D hypothetical protein 2994779..2995072 Ralstonia pickettii 12D 8020498 YP_002982770.1 CDS Rpic12D_2828 NC_012856.1 2995121 2996050 D PFAM: protein of unknown function DUF159; KEGG: mpt:Mpe_A1934 hypothetical protein; hypothetical protein 2995121..2996050 Ralstonia pickettii 12D 8020499 YP_002982771.1 CDS Rpic12D_2829 NC_012856.1 2996170 2996409 D hypothetical protein 2996170..2996409 Ralstonia pickettii 12D 8020500 YP_002982772.1 CDS Rpic12D_2830 NC_012856.1 2996406 2996660 D hypothetical protein 2996406..2996660 Ralstonia pickettii 12D 8020501 YP_002982773.1 CDS Rpic12D_2831 NC_012856.1 2996704 2997426 D KEGG: bcm:Bcenmc03_6925 hypothetical protein; hypothetical protein 2996704..2997426 Ralstonia pickettii 12D 8020502 YP_002982774.1 CDS Rpic12D_2832 NC_012856.1 2997442 2997663 R hypothetical protein complement(2997442..2997663) Ralstonia pickettii 12D 8020503 YP_002982775.1 CDS Rpic12D_2833 NC_012856.1 2997834 2998346 R KEGG: pol:Bpro_2508 hypothetical protein; hypothetical protein complement(2997834..2998346) Ralstonia pickettii 12D 8020504 YP_002982776.1 CDS Rpic12D_2834 NC_012856.1 2998447 2998665 R hypothetical protein complement(2998447..2998665) Ralstonia pickettii 12D 8020505 YP_002982777.1 CDS Rpic12D_2835 NC_012856.1 2999131 2999706 D hypothetical protein 2999131..2999706 Ralstonia pickettii 12D 8020506 YP_002982778.1 CDS Rpic12D_2836 NC_012856.1 2999916 3000047 R hypothetical protein complement(2999916..3000047) Ralstonia pickettii 12D 8020507 YP_002982779.1 CDS Rpic12D_2837 NC_012856.1 3000839 3001021 D hypothetical protein 3000839..3001021 Ralstonia pickettii 12D 8020508 YP_002982780.1 CDS Rpic12D_2838 NC_012856.1 3001557 3001979 R hypothetical protein complement(3001557..3001979) Ralstonia pickettii 12D 8020509 YP_002982781.1 CDS Rpic12D_2839 NC_012856.1 3001945 3002562 R hypothetical protein complement(3001945..3002562) Ralstonia pickettii 12D 8020510 YP_002982782.1 CDS Rpic12D_2840 NC_012856.1 3002715 3002996 D KEGG: bpm:BURPS1710b_2784 hypothetical protein; hypothetical protein 3002715..3002996 Ralstonia pickettii 12D 8020511 YP_002982783.1 CDS Rpic12D_2841 NC_012856.1 3003005 3004306 R KEGG: bur:Bcep18194_C6533 hypothetical protein; hypothetical protein complement(3003005..3004306) Ralstonia pickettii 12D 8020512 YP_002982784.1 CDS Rpic12D_2842 NC_012856.1 3004346 3004546 R hypothetical protein complement(3004346..3004546) Ralstonia pickettii 12D 8020513 YP_002982785.1 CDS Rpic12D_2843 NC_012856.1 3004705 3006465 R KEGG: proteophosphoglycan ppg4; hypothetical protein complement(3004705..3006465) Ralstonia pickettii 12D 8020514 YP_002982786.1 CDS Rpic12D_2844 NC_012856.1 3006462 3006755 R hypothetical protein complement(3006462..3006755) Ralstonia pickettii 12D 8020515 YP_002982787.1 CDS Rpic12D_2845 NC_012856.1 3006770 3007525 R TIGRFAM: P-type conjugative transfer protein TrbJ; KEGG: rle:pRL80138 conjugal transfer protein TrbJ; P-type conjugative transfer protein TrbJ complement(3006770..3007525) Ralstonia pickettii 12D 8020516 YP_002982788.1 CDS Rpic12D_2846 NC_012856.1 3007534 3007716 R hypothetical protein complement(3007534..3007716) Ralstonia pickettii 12D 8020517 YP_002982789.1 CDS Rpic12D_2847 NC_012856.1 3007736 3008629 R hypothetical protein complement(3007736..3008629) Ralstonia pickettii 12D 8020518 YP_002982790.1 CDS Rpic12D_2848 NC_012856.1 3008671 3008871 R hypothetical protein complement(3008671..3008871) Ralstonia pickettii 12D 8020519 YP_002982791.1 CDS Rpic12D_2849 NC_012856.1 3009092 3009385 R hypothetical protein complement(3009092..3009385) Ralstonia pickettii 12D 8020520 YP_002982792.1 CDS Rpic12D_2850 NC_012856.1 3009466 3010413 R KEGG: bav:BAV0381 plasmid-related protein; hypothetical protein complement(3009466..3010413) Ralstonia pickettii 12D 8020521 YP_002982793.1 CDS Rpic12D_2851 NC_012856.1 3010416 3010631 R KEGG: abo:ABO_2067 hypothetical protein; hypothetical protein complement(3010416..3010631) Ralstonia pickettii 12D 8020522 YP_002982794.1 CDS Rpic12D_2852 NC_012856.1 3010682 3010789 D hypothetical protein 3010682..3010789 Ralstonia pickettii 12D 8020523 YP_002982795.1 CDS Rpic12D_2853 NC_012856.1 3010825 3011442 D hypothetical protein 3010825..3011442 Ralstonia pickettii 12D 8020524 YP_002982796.1 CDS Rpic12D_2854 NC_012856.1 3011439 3012494 R PFAM: integrase family protein; KEGG: bch:Bcen2424_0446 phage integrase family protein; integrase family protein complement(3011439..3012494) Ralstonia pickettii 12D 8020525 YP_002982797.1 CDS Rpic12D_2855 NC_012856.1 3012697 3013194 R PFAM: Stringent starvation protein B; KEGG: rso:RSc2925 ClpXP protease specificity-enhancing factor; ClpXP protease specificity-enhancing factor complement(3012697..3013194) Ralstonia pickettii 12D 8020527 YP_002982798.1 CDS Rpic12D_2856 NC_012856.1 3013267 3013878 R PFAM: Glutathione S-transferase domain; KEGG: rso:RSc2926 transcription modulator protein; glutathione S-transferase complement(3013267..3013878) Ralstonia pickettii 12D 8020528 YP_002982799.1 CDS Rpic12D_2857 NC_012856.1 3014029 3014772 R PFAM: cytochrome C1; KEGG: rso:RSc2927 cytochrome C1 precursor transmembrane protein; cytochrome C1 complement(3014029..3014772) Ralstonia pickettii 12D 8020529 YP_002982800.1 CDS Rpic12D_2858 NC_012856.1 3014810 3016210 R PFAM: cytochrome b/b6 domain; KEGG: rso:RSc2928 cytochrome b subunit transmembrane protein; cytochrome b/b6 protein complement(3014810..3016210) Ralstonia pickettii 12D 8020530 YP_002982801.1 CDS Rpic12D_2859 NC_012856.1 3016213 3016821 R KEGG: rso:RSc2929 transmembrane ubiquinol-cytochrome C reductase (iron-sulfur subunit) oxidoreductase protein; TIGRFAM: ubiquinol-cytochrome C reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; ubiquinol-cytochrome C reductase, iron-sulfur subunit complement(3016213..3016821) Ralstonia pickettii 12D 8020531 YP_002982802.1 CDS mscL NC_012856.1 3017067 3017495 D homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 3017067..3017495 Ralstonia pickettii 12D 8020532 YP_002982803.1 CDS Rpic12D_2861 NC_012856.1 3017508 3018254 R PFAM: protein of unknown function DUF34; KEGG: rso:RSc2931 hypothetical protein; hypothetical protein complement(3017508..3018254) Ralstonia pickettii 12D 8020533 YP_002982804.1 CDS Rpic12D_2862 NC_012856.1 3018274 3019488 D KEGG: rso:RSc2932 HtrA-like serine protease signal peptide protein; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; protease Do 3018274..3019488 Ralstonia pickettii 12D 8020534 YP_002982805.1 CDS Rpic12D_2863 NC_012856.1 3019932 3021056 R PFAM: porin Gram-negative type; KEGG: rso:RSc2933 porin signal peptide protein; porin complement(3019932..3021056) Ralstonia pickettii 12D 8020535 YP_002982806.1 CDS Rpic12D_2864 NC_012856.1 3021390 3022532 R PFAM: extracellular solute-binding protein family 1; KEGG: rso:RSc2934 hypothetical protein; family 1 extracellular solute-binding protein complement(3021390..3022532) Ralstonia pickettii 12D 8020536 YP_002982807.1 CDS Rpic12D_2865 NC_012856.1 3022653 3023354 D PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: rso:RSc2935 response regulator transcription regulator protein; winged helix family two component transcriptional regulator 3022653..3023354 Ralstonia pickettii 12D 8020537 YP_002982808.1 CDS Rpic12D_2866 NC_012856.1 3023351 3024877 D PFAM: Two-component sensor kinase domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rso:RSc2936 transmembrane sensor kinase transcription regulator protein; histidine kinase 3023351..3024877 Ralstonia pickettii 12D 8020538 YP_002982809.1 CDS Rpic12D_2867 NC_012856.1 3025003 3026109 D PFAM: extracellular solute-binding protein family 1; KEGG: rso:RSc2937 periplasmic iron-binding signal peptide protein; family 1 extracellular solute-binding protein 3025003..3026109 Ralstonia pickettii 12D 8020539 YP_002982810.1 CDS Rpic12D_2868 NC_012856.1 3026204 3028015 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc2938 transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein 3026204..3028015 Ralstonia pickettii 12D 8020540 YP_002982811.1 CDS Rpic12D_2869 NC_012856.1 3028008 3029093 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RSc2939 ABC transporter ATP-binding protein; ABC transporter 3028008..3029093 Ralstonia pickettii 12D 8020541 YP_002982812.1 CDS Rpic12D_2870 NC_012856.1 3029181 3029984 R TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: rso:RSc2940 sec-independent translocase protein TatC transmembrane; Sec-independent protein translocase subunit TatC complement(3029181..3029984) Ralstonia pickettii 12D 8020542 YP_002982813.1 CDS tatB NC_012856.1 3030046 3030558 R TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: rso:RSc2941 sec-independent translocase; sec-independent translocase complement(3030046..3030558) Ralstonia pickettii 12D 8020543 YP_002982814.1 CDS tatA NC_012856.1 3030580 3030837 R TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A complement(3030580..3030837) Ralstonia pickettii 12D 8020544 YP_002982815.1 CDS Rpic12D_2873 NC_012856.1 3030900 3031274 R KEGG: rso:RSc2943 hypothetical protein; hypothetical protein complement(3030900..3031274) Ralstonia pickettii 12D 8020545 YP_002982816.1 CDS hisE NC_012856.1 3031306 3031680 R catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase complement(3031306..3031680) Ralstonia pickettii 12D 8020546 YP_002982817.1 CDS hisI NC_012856.1 3031673 3032095 R PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase complement(3031673..3032095) Ralstonia pickettii 12D 8020547 YP_002982818.1 CDS Rpic12D_2876 NC_012856.1 3032092 3032868 R catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF complement(3032092..3032868) Ralstonia pickettii 12D 8020548 YP_002982819.1 CDS Rpic12D_2877 NC_012856.1 3032916 3033659 R catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase complement(3032916..3033659) Ralstonia pickettii 12D 8020549 YP_002982820.1 CDS hisH NC_012856.1 3033733 3034386 R with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH complement(3033733..3034386) Ralstonia pickettii 12D 8020550 YP_002982821.1 CDS Rpic12D_2879 NC_012856.1 3034395 3035018 R PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: rso:RSc2949 hypothetical protein; multiple antibiotic resistance (MarC)-like protein complement(3034395..3035018) Ralstonia pickettii 12D 8020551 YP_002982822.1 CDS hisB NC_012856.1 3035074 3035664 R catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase complement(3035074..3035664) Ralstonia pickettii 12D 8020552 YP_002982823.1 CDS Rpic12D_2881 NC_012856.1 3035661 3036785 R catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase complement(3035661..3036785) Ralstonia pickettii 12D 8020553 YP_002982824.1 CDS hisD NC_012856.1 3036802 3038130 R catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase complement(3036802..3038130) Ralstonia pickettii 12D 8020554 YP_002982825.1 CDS hisG NC_012856.1 3038127 3038816 R short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase catalytic subunit complement(3038127..3038816) Ralstonia pickettii 12D 8020555 YP_002982826.1 CDS Rpic12D_2884 NC_012856.1 3038824 3040188 R adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(3038824..3040188) Ralstonia pickettii 12D 8020556 YP_002982827.1 CDS Rpic12D_2885 NC_012856.1 3040188 3040424 R PFAM: BolA family protein; KEGG: rso:RSc2954 hypothetical protein; BolA family protein complement(3040188..3040424) Ralstonia pickettii 12D 8020557 YP_002982828.1 CDS Rpic12D_2886 NC_012856.1 3040484 3041272 R PFAM: ABC transporter; KEGG: rso:RSc2955 hypothetical protein; ABC transporter complement(3040484..3041272) Ralstonia pickettii 12D 8020558 YP_002982829.1 CDS Rpic12D_2887 NC_012856.1 3041269 3042234 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RSc2956 ABC transporter ATP-binding protein; ABC transporter complement(3041269..3042234) Ralstonia pickettii 12D 8020559 YP_002982830.1 CDS Rpic12D_2888 NC_012856.1 3042484 3042795 R KEGG: rso:RSc2957 signal peptide protein; signal peptide protein complement(3042484..3042795) Ralstonia pickettii 12D 8020560 YP_002982831.1 CDS Rpic12D_2889 NC_012856.1 3042869 3043504 R PFAM: toluene tolerance family protein; KEGG: rso:RSc2958 signal peptide protein; toluene tolerance family protein complement(3042869..3043504) Ralstonia pickettii 12D 8020561 YP_002982832.1 CDS Rpic12D_2890 NC_012856.1 3043657 3044460 R PFAM: VacJ family lipoprotein; KEGG: rso:RSc2959 lipoprotein precursor (VacJ) transmembrane; VacJ family lipoprotein complement(3043657..3044460) Ralstonia pickettii 12D 8020562 YP_002982833.1 CDS Rpic12D_2891 NC_012856.1 3044457 3044984 R PFAM: mammalian cell entry related domain protein; KEGG: rso:RSc2960 signal peptide protein; mammalian cell entry domain-containing protein complement(3044457..3044984) Ralstonia pickettii 12D 8020563 YP_002982834.1 CDS Rpic12D_2892 NC_012856.1 3045022 3045789 R PFAM: protein of unknown function DUF140; KEGG: rso:RSc2961 hypothetical protein; hypothetical protein complement(3045022..3045789) Ralstonia pickettii 12D 8020564 YP_002982835.1 CDS Rpic12D_2893 NC_012856.1 3045786 3046619 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RSc2962 ABC transporter ATP-binding protein; ABC transporter complement(3045786..3046619) Ralstonia pickettii 12D 8020565 YP_002982836.1 CDS Rpic12D_2894 NC_012856.1 3046890 3047837 R PFAM: conserved hypothetical protein; KEGG: rso:RSc2963 hypothetical protein; hypothetical protein complement(3046890..3047837) Ralstonia pickettii 12D 8020566 YP_002982837.1 CDS gltD NC_012856.1 3048108 3049571 R glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta complement(3048108..3049571) Ralstonia pickettii 12D 8020567 YP_002982838.1 CDS Rpic12D_2896 NC_012856.1 3049710 3054422 R PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: rso:RSc2965 glutamate synthase (large subunit) oxidoreductase protein; glutamate synthase complement(3049710..3054422) Ralstonia pickettii 12D 8020568 YP_002982839.1 CDS Rpic12D_2897 NC_012856.1 3054684 3055436 R PFAM: protein of unknown function DUF1568; KEGG: rso:RSc2966 hypothetical protein; hypothetical protein complement(3054684..3055436) Ralstonia pickettii 12D 8020569 YP_002982840.1 CDS Rpic12D_2898 NC_012856.1 3055656 3056330 D PFAM: OmpW family protein; KEGG: rso:RSc2967 outer membrane signal peptide protein; OmpW family protein 3055656..3056330 Ralstonia pickettii 12D 8020570 YP_002982841.1 CDS Rpic12D_2899 NC_012856.1 3056547 3057713 R dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase-like protein complement(3056547..3057713) Ralstonia pickettii 12D 8020571 YP_002982842.1 CDS aroB NC_012856.1 3057733 3058839 R catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase complement(3057733..3058839) Ralstonia pickettii 12D 8020572 YP_002982843.1 CDS aroK NC_012856.1 3058836 3059375 R catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase complement(3058836..3059375) Ralstonia pickettii 12D 8020573 YP_002982844.1 CDS Rpic12D_2902 NC_012856.1 3059547 3061712 R TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; Secretin/TonB short domain; NolW domain protein; KEGG: rso:RSc2971 fimbrial type-4 assembly signal peptide protein; type IV pilus secretin PilQ complement(3059547..3061712) Ralstonia pickettii 12D 8020574 YP_002982845.1 CDS Rpic12D_2903 NC_012856.1 3061709 3062254 R PFAM: pilus assembly protein PilP; KEGG: rso:RSc2972 fimbrial type-4 assembly lipoprotein; pilus assembly protein PilP complement(3061709..3062254) Ralstonia pickettii 12D 8020575 YP_002982846.1 CDS Rpic12D_2904 NC_012856.1 3062251 3062910 R PFAM: pilus assembly protein PilO; KEGG: rso:RSc2973 fimbrial type-4 assembly membrane transmembrane protein; pilus assembly protein PilO complement(3062251..3062910) Ralstonia pickettii 12D 8020576 YP_002982847.1 CDS Rpic12D_2905 NC_012856.1 3062913 3063545 R PFAM: fimbrial assembly family protein; KEGG: rso:RSc2974 fimbrial type-4 assembly membrane transmembrane protein; fimbrial assembly family protein complement(3062913..3063545) Ralstonia pickettii 12D 8020577 YP_002982848.1 CDS Rpic12D_2906 NC_012856.1 3063556 3064641 R TIGRFAM: type IV pilus assembly protein PilM; KEGG: rso:RSc2975 fimbrial type-4 assembly protein; type IV pilus assembly protein PilM complement(3063556..3064641) Ralstonia pickettii 12D 8020578 YP_002982849.1 CDS Rpic12D_2907 NC_012856.1 3065161 3067494 D KEGG: rso:RSc2976 penicillin-binding 1 transmembrane protein; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; penicillin-binding protein 3065161..3067494 Ralstonia pickettii 12D 8020579 YP_002982850.1 CDS cyaY NC_012856.1 3067565 3067951 R defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease; based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly; frataxin-like protein complement(3067565..3067951) Ralstonia pickettii 12D 8020580 YP_002982851.1 CDS Rpic12D_2909 NC_012856.1 3068047 3068280 D KEGG: rso:RSc2978 proline-rich transmembrane protein; proline-rich transmembrane protein 3068047..3068280 Ralstonia pickettii 12D 8020581 YP_002982852.1 CDS Rpic12D_2910 NC_012856.1 3068332 3069603 D TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: rso:RSc2979 diaminopimelate decarboxylase protein; diaminopimelate decarboxylase 3068332..3069603 Ralstonia pickettii 12D 8020582 YP_002982853.1 CDS Rpic12D_2911 NC_012856.1 3069669 3070325 R in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme; sulfite oxidase subunit YedZ complement(3069669..3070325) Ralstonia pickettii 12D 8020583 YP_002982854.1 CDS Rpic12D_2912 NC_012856.1 3070333 3071328 R in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; sulfite oxidase subunit YedY complement(3070333..3071328) Ralstonia pickettii 12D 8020584 YP_002982855.1 CDS Rpic12D_2913 NC_012856.1 3071424 3072284 R KEGG: rso:RSc2982 hypothetical protein; transmembrane anti-sigma factor complement(3071424..3072284) Ralstonia pickettii 12D 8020585 YP_002982856.1 CDS Rpic12D_2914 NC_012856.1 3072293 3072874 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: rso:RSc2983 RNA polymerase sigma-E factor (sigma-24) transcription regulator protein; ECF subfamily RNA polymerase sigma-24 subunit complement(3072293..3072874) Ralstonia pickettii 12D 8020586 YP_002982857.1 CDS Rpic12D_2915 NC_012856.1 3072900 3073328 R PFAM: Secreted repeat of unknown function; KEGG: rso:RSc2984 hypothetical protein; hypothetical protein complement(3072900..3073328) Ralstonia pickettii 12D 8020587 YP_002982858.1 CDS Rpic12D_2916 NC_012856.1 3073437 3074624 R TIGRFAM: cytochrome C-type biogenesis protein CcsB; PFAM: cytochrome C assembly protein; KEGG: rso:RSc2985 transmembrane cytochrome C-type biogenesis transmembrane protein; cytochrome C-type biogenesis protein CcsB complement(3073437..3074624) Ralstonia pickettii 12D 8020588 YP_002982859.1 CDS Rpic12D_2917 NC_012856.1 3074632 3076836 R PFAM: ResB family protein; KEGG: rso:RSc2986 cytochrome C-type biogenesis transmembrane protein; ResB family protein complement(3074632..3076836) Ralstonia pickettii 12D 8020589 YP_002982860.1 CDS Rpic12D_2918 NC_012856.1 3076949 3077608 R PFAM: cytochrome C class I; KEGG: rso:RSc2987 oxidoreductase cytochrome C-type signal peptide protein; class I cytochrome c complement(3076949..3077608) Ralstonia pickettii 12D 8020590 YP_002982861.1 CDS engB NC_012856.1 3077865 3078566 D binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 3077865..3078566 Ralstonia pickettii 12D 8020591 YP_002982862.1 CDS Rpic12D_2920 NC_012856.1 3078717 3079712 D catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 3078717..3079712 Ralstonia pickettii 12D 8020592 YP_002982863.1 CDS Rpic12D_2921 NC_012856.1 3079713 3081527 R PFAM: cytochrome C biogenesis protein transmembrane region; Thioredoxin domain; KEGG: rso:RSc2990 thiol:disulfide interchange transmembrane protein; protein-disulfide reductase complement(3079713..3081527) Ralstonia pickettii 12D 8020593 YP_002982864.1 CDS Rpic12D_2922 NC_012856.1 3081570 3081908 R PFAM: CutA1 divalent ion tolerance protein; KEGG: rso:RSc2991 periplasmic divalent cation tolerance protein; CutA1 divalent ion tolerance protein complement(3081570..3081908) Ralstonia pickettii 12D 8020594 YP_002982865.1 CDS rplQ NC_012856.1 3082067 3082465 R is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 complement(3082067..3082465) Ralstonia pickettii 12D 8020595 YP_002982866.1 CDS Rpic12D_2924 NC_012856.1 3082608 3083588 R catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha complement(3082608..3083588) Ralstonia pickettii 12D 8020596 YP_002982867.1 CDS rpsD NC_012856.1 3083822 3084445 R primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 complement(3083822..3084445) Ralstonia pickettii 12D 8020597 YP_002982868.1 CDS Rpic12D_2926 NC_012856.1 3084649 3085050 R located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 complement(3084649..3085050) Ralstonia pickettii 12D 8020598 YP_002982869.1 CDS rpsM NC_012856.1 3085075 3085440 R located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 complement(3085075..3085440) Ralstonia pickettii 12D 8020599 YP_002982870.1 CDS rpmJ NC_012856.1 3085462 3085578 R smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 complement(3085462..3085578) Ralstonia pickettii 12D 8020600 YP_002982871.1 CDS Rpic12D_2929 NC_012856.1 3085609 3085827 R TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein; KEGG: bpy:Bphyt_3623 translation initiation factor IF-1; translation initiation factor IF-1 complement(3085609..3085827) Ralstonia pickettii 12D 8020601 YP_002982872.1 CDS secY NC_012856.1 3085854 3087176 R forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY complement(3085854..3087176) Ralstonia pickettii 12D 8020602 YP_002982873.1 CDS rplO NC_012856.1 3087234 3087665 R late assembly protein; 50S ribosomal protein L15 complement(3087234..3087665) Ralstonia pickettii 12D 8020603 YP_002982874.1 CDS rpmD NC_012856.1 3087684 3087866 R L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 complement(3087684..3087866) Ralstonia pickettii 12D 8020604 YP_002982875.1 CDS rpsE NC_012856.1 3087889 3088407 R located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 complement(3087889..3088407) Ralstonia pickettii 12D 8020605 YP_002982876.1 CDS rplR NC_012856.1 3088429 3088785 R binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 complement(3088429..3088785) Ralstonia pickettii 12D 8020606 YP_002982877.1 CDS rplF NC_012856.1 3088797 3089330 R ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 complement(3088797..3089330) Ralstonia pickettii 12D 8020607 YP_002982878.1 CDS rpsH NC_012856.1 3089343 3089738 R binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 complement(3089343..3089738) Ralstonia pickettii 12D 8020608 YP_002982879.1 CDS rpsN NC_012856.1 3089766 3090071 R located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 complement(3089766..3090071) Ralstonia pickettii 12D 8020609 YP_002982880.1 CDS rplE NC_012856.1 3090081 3090623 R part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 complement(3090081..3090623) Ralstonia pickettii 12D 8020610 YP_002982881.1 CDS rplX NC_012856.1 3090650 3090958 R assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 complement(3090650..3090958) Ralstonia pickettii 12D 8020611 YP_002982882.1 CDS rplN NC_012856.1 3090970 3091338 R binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 complement(3090970..3091338) Ralstonia pickettii 12D 8020612 YP_002982883.1 CDS rpsQ NC_012856.1 3091606 3091875 R primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 complement(3091606..3091875) Ralstonia pickettii 12D 8020613 YP_002982884.1 CDS Rpic12D_2942 NC_012856.1 3091872 3092066 R one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 complement(3091872..3092066) Ralstonia pickettii 12D 8020614 YP_002982885.1 CDS rplP NC_012856.1 3092079 3092495 R located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 complement(3092079..3092495) Ralstonia pickettii 12D 8020615 YP_002982886.1 CDS rpsC NC_012856.1 3092498 3093292 R forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 complement(3092498..3093292) Ralstonia pickettii 12D 8020616 YP_002982887.1 CDS rplV NC_012856.1 3093302 3093631 R binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 complement(3093302..3093631) Ralstonia pickettii 12D 8020617 YP_002982888.1 CDS rpsS NC_012856.1 3093641 3093916 R protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 complement(3093641..3093916) Ralstonia pickettii 12D 8020618 YP_002982889.1 CDS rplB NC_012856.1 3093938 3094768 R one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 complement(3093938..3094768) Ralstonia pickettii 12D 8020619 YP_002982890.1 CDS rplW NC_012856.1 3094771 3095085 R binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 complement(3094771..3095085) Ralstonia pickettii 12D 8020620 YP_002982891.1 CDS rplD NC_012856.1 3095082 3095702 R L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 complement(3095082..3095702) Ralstonia pickettii 12D 8020621 YP_002982892.1 CDS rplC NC_012856.1 3095714 3096367 R binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 complement(3095714..3096367) Ralstonia pickettii 12D 8020622 YP_002982893.1 CDS rpsJ NC_012856.1 3096653 3096964 R NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 complement(3096653..3096964) Ralstonia pickettii 12D 8020623 YP_002982894.1 CDS Rpic12D_2952 NC_012856.1 3097072 3098280 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(3097072..3098280) Ralstonia pickettii 12D 8020624 YP_002982895.1 CDS Rpic12D_2953 NC_012856.1 3098364 3100490 R EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G complement(3098364..3100490) Ralstonia pickettii 12D 8020625 YP_002982896.1 CDS Rpic12D_2954 NC_012856.1 3100606 3101076 R binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 complement(3100606..3101076) Ralstonia pickettii 12D 8020626 YP_002982897.1 CDS rpsL NC_012856.1 3101263 3101640 R interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 complement(3101263..3101640) Ralstonia pickettii 12D 8020627 YP_002982898.1 CDS Rpic12D_2956 NC_012856.1 3101938 3103197 R PFAM: major facilitator superfamily MFS_1; KEGG: met:M446_0871 major facilitator transporter; major facilitator superfamily protein complement(3101938..3103197) Ralstonia pickettii 12D 8020628 YP_002982899.1 CDS Rpic12D_2957 NC_012856.1 3103297 3104217 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cps:CPS_3497 LysR family transcriptional regulator; LysR family transcriptional regulator 3103297..3104217 Ralstonia pickettii 12D 8020629 YP_002982900.1 CDS Rpic12D_2958 NC_012856.1 3104214 3106124 R KEGG: rso:RSc3025 ATP-dependent DNA helicase protein; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; HRDC domain protein; SMART: DEAD-like helicases ; helicase domain protein; HRDC domain protein; ATP-dependent DNA helicase RecQ complement(3104214..3106124) Ralstonia pickettii 12D 8020630 YP_002982901.1 CDS Rpic12D_2959 NC_012856.1 3106237 3106827 R PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: rso:RSc3026 hypothetical protein; type 12 methyltransferase complement(3106237..3106827) Ralstonia pickettii 12D 8020631 YP_002982902.1 CDS Rpic12D_2960 NC_012856.1 3106835 3107677 R KEGG: rso:RSc3027 signal peptide protein; signal peptide protein complement(3106835..3107677) Ralstonia pickettii 12D 8020632 YP_002982903.1 CDS Rpic12D_2961 NC_012856.1 3107688 3108491 R KEGG: rso:RSc3028 signal peptide protein; signal peptide protein complement(3107688..3108491) Ralstonia pickettii 12D 8020633 YP_002982904.1 CDS Rpic12D_2962 NC_012856.1 3108488 3110218 R KEGG: rso:RSc3029 signal peptide protein; signal peptide protein complement(3108488..3110218) Ralstonia pickettii 12D 8020634 YP_002982905.1 CDS Rpic12D_2963 NC_012856.1 3110226 3115010 R PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; alpha-2-macroglobulin; KEGG: rso:RSc3030 signal peptide protein; alpha-2-macroglobulin domain-containing protein complement(3110226..3115010) Ralstonia pickettii 12D 8020635 YP_002982906.1 CDS Rpic12D_2964 NC_012856.1 3115019 3115723 R PFAM: protein of unknown function DUF1175; KEGG: rso:RSc3031 hypothetical protein; hypothetical protein complement(3115019..3115723) Ralstonia pickettii 12D 8020636 YP_002982907.1 CDS Rpic12D_2965 NC_012856.1 3115720 3117573 R KEGG: rso:RSc3032 hypothetical protein; hypothetical protein complement(3115720..3117573) Ralstonia pickettii 12D 8020637 YP_002982908.1 CDS Rpic12D_2966 NC_012856.1 3117832 3122061 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' complement(3117832..3122061) Ralstonia pickettii 12D 8020638 YP_002982909.1 CDS rpoB NC_012856.1 3122189 3126295 R DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta complement(3122189..3126295) Ralstonia pickettii 12D 8020639 YP_002982910.1 CDS rplL NC_012856.1 3126745 3127119 R present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 complement(3126745..3127119) Ralstonia pickettii 12D 8020640 YP_002982911.1 CDS rplJ NC_012856.1 3127183 3127689 R binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 complement(3127183..3127689) Ralstonia pickettii 12D 8020641 YP_002982912.1 CDS rplA NC_012856.1 3128066 3128761 R in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 complement(3128066..3128761) Ralstonia pickettii 12D 8020642 YP_002982913.1 CDS rplK NC_012856.1 3128764 3129195 R binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 complement(3128764..3129195) Ralstonia pickettii 12D 8020643 YP_002982914.1 CDS nusG NC_012856.1 3129373 3129957 R Modulates Rho-dependent transcription termination; transcription antitermination protein NusG complement(3129373..3129957) Ralstonia pickettii 12D 8020644 YP_002982915.1 CDS secE NC_012856.1 3129970 3130350 R forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE complement(3129970..3130350) Ralstonia pickettii 12D 8020645 YP_002982916.1 CDS Rpic12D_2974 NC_012856.1 3130574 3131764 R EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu complement(3130574..3131764) Ralstonia pickettii 12D 8020647 YP_002982917.1 CDS Rpic12D_2975 NC_012856.1 3132525 3134054 R PFAM: transposase IS66; KEGG: bcm:Bcenmc03_6939 transposase IS66; transposase IS66 complement(3132525..3134054) Ralstonia pickettii 12D 8020651 YP_002982918.1 CDS Rpic12D_2976 NC_012856.1 3134117 3134407 R PFAM: IS66 Orf2 family protein; KEGG: ajs:Ajs_2917 IS66 Orf2 family protein; IS66 Orf2 family protein complement(3134117..3134407) Ralstonia pickettii 12D 8020652 YP_002982919.1 CDS Rpic12D_2977 NC_012856.1 3134449 3134820 R PFAM: transposase IS3/IS911 family protein; KEGG: bxe:Bxe_B1867 hypothetical protein; transposase IS3/IS911 family protein complement(3134449..3134820) Ralstonia pickettii 12D 8020653 YP_002982920.1 CDS Rpic12D_2978 NC_012856.1 3140494 3141528 R PFAM: CHAD domain containing protein; KEGG: rso:RSc3043 hypothetical protein; CHAD domain-containing protein complement(3140494..3141528) Ralstonia pickettii 12D 8020660 YP_002982921.1 CDS Rpic12D_2979 NC_012856.1 3141638 3142411 R PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: rso:RSc3044 glycerol-3-phosphate regulon repressor transcription regulator protein; DeoR family transcriptional regulator complement(3141638..3142411) Ralstonia pickettii 12D 8020661 YP_002982922.1 CDS glpD NC_012856.1 3142555 3144132 D in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase 3142555..3144132 Ralstonia pickettii 12D 8020662 YP_002982923.1 CDS Rpic12D_2981 NC_012856.1 3144201 3145319 D PFAM: ABC transporter; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rso:RSc3046 sugar-phosphate ATP-binding ABC transporter protein; ABC transporter 3144201..3145319 Ralstonia pickettii 12D 8020663 YP_002982924.1 CDS Rpic12D_2982 NC_012856.1 3145306 3146403 D PFAM: ABC transporter; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rso:RSc3047 ABC transporter ATP-binding protein; ABC transporter 3145306..3146403 Ralstonia pickettii 12D 8020664 YP_002982925.1 CDS Rpic12D_2983 NC_012856.1 3146400 3147290 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc3048 sugar-phosphate transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein 3146400..3147290 Ralstonia pickettii 12D 8020665 YP_002982926.1 CDS Rpic12D_2984 NC_012856.1 3147283 3148113 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc3049 transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein 3147283..3148113 Ralstonia pickettii 12D 8020666 YP_002982927.1 CDS Rpic12D_2985 NC_012856.1 3148136 3148417 D KEGG: rso:RSc3050 hypothetical protein; hypothetical protein 3148136..3148417 Ralstonia pickettii 12D 8020667 YP_002982928.1 CDS Rpic12D_2986 NC_012856.1 3148571 3150316 D KEGG: rso:RSc3051 signal peptide protein; signal peptide protein 3148571..3150316 Ralstonia pickettii 12D 8020668 YP_002982929.1 CDS Rpic12D_2987 NC_012856.1 3150430 3151926 D TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: rso:RSc3052 ATP:glycerol 3-phosphotransferase protein; glycerol kinase 3150430..3151926 Ralstonia pickettii 12D 8020669 YP_002982930.1 CDS Rpic12D_2988 NC_012856.1 3151995 3152360 R KEGG: rso:RSc3053 signal peptide protein; signal peptide protein complement(3151995..3152360) Ralstonia pickettii 12D 8020670 YP_002982931.1 CDS Rpic12D_2989 NC_012856.1 3152430 3153179 D PFAM: protein of unknown function DUF1415; KEGG: rso:RSc3054 hypothetical protein; hypothetical protein 3152430..3153179 Ralstonia pickettii 12D 8020671 YP_002982932.1 CDS mdoD NC_012856.1 3153465 3155147 R involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans; glucan biosynthesis protein D complement(3153465..3155147) Ralstonia pickettii 12D 8020672 YP_002982933.1 CDS Rpic12D_2991 NC_012856.1 3155280 3156596 D PFAM: N-acylglucosamine 2-epimerase; KEGG: rso:RSc3058 mannose-6-phosphate isomerase protein; N-acylglucosamine 2-epimerase 3155280..3156596 Ralstonia pickettii 12D 8020673 YP_002982934.1 CDS Rpic12D_2992 NC_012856.1 3156605 3157906 D TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: rso:RSc3059 sugar transporter transmembrane protein; major facilitator superfamily metabolite/H+ symporter 3156605..3157906 Ralstonia pickettii 12D 8020674 YP_002982935.1 CDS Rpic12D_2993 NC_012856.1 3158587 3159678 R PFAM: extracellular ligand-binding receptor; KEGG: rso:RSc3061 substrate-binding periplasmic (PBP) ABC transporter protein; extracellular ligand-binding receptor complement(3158587..3159678) Ralstonia pickettii 12D 8020675 YP_002982936.1 CDS Rpic12D_2994 NC_012856.1 3159961 3160758 D PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rso:RSc3062 transcription regulator protein; AraC family transcriptional regulator 3159961..3160758 Ralstonia pickettii 12D 8020676 YP_002982937.1 CDS Rpic12D_2996 NC_012856.1 3161141 3162061 R KEGG: bvi:Bcep1808_4988 alpha/beta hydrolase-like protein; alpha/beta hydrolase-like protein complement(3161141..3162061) Ralstonia pickettii 12D 8020678 YP_002982938.1 CDS Rpic12D_2997 NC_012856.1 3162179 3163135 D PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: rme:Rmet_4760 transcriptional regulator, XRE family; XRE family transcriptional regulator 3162179..3163135 Ralstonia pickettii 12D 8020679 YP_002982939.1 CDS Rpic12D_2998 NC_012856.1 3163225 3163989 D PFAM: PepSY-associated TM helix domain protein; KEGG: rso:RSc3067 hypothetical protein; PepSY-associated TM helix domain-containing protein 3163225..3163989 Ralstonia pickettii 12D 8020680 YP_002982940.1 CDS Rpic12D_2999 NC_012856.1 3164061 3164924 R PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: pol:Bpro_0662 transcriptional regulator, RpiR family; RpiR family transcriptional regulator complement(3164061..3164924) Ralstonia pickettii 12D 8020681 YP_002982941.1 CDS Rpic12D_3000 NC_012856.1 3165211 3166257 D PFAM: porin Gram-negative type; KEGG: cti:RALTA_A0042 outer membrane porin; porin 3165211..3166257 Ralstonia pickettii 12D 8020682 YP_002982942.1 CDS Rpic12D_3001 NC_012856.1 3166534 3168801 R PFAM: MscS Mechanosensitive ion channel; KEGG: rso:RSc3068 hypothetical protein; mechanosensitive ion channel MscS complement(3166534..3168801) Ralstonia pickettii 12D 8020683 YP_002982943.1 CDS Rpic12D_3002 NC_012856.1 3168874 3170220 R PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSc3069 transporter transmembrane protein; major facilitator superfamily protein complement(3168874..3170220) Ralstonia pickettii 12D 8020684 YP_002982944.1 CDS Rpic12D_3003 NC_012856.1 3170246 3170962 D PFAM: Glutathione S-transferase domain; KEGG: rso:RSc3070 glutathione S-transferase protein; glutathione S-transferase 3170246..3170962 Ralstonia pickettii 12D 8020685 YP_002982945.1 CDS Rpic12D_3004 NC_012856.1 3171004 3171417 R KEGG: rso:RSc3071 hypothetical protein; hypothetical protein complement(3171004..3171417) Ralstonia pickettii 12D 8020686 YP_002982946.1 CDS Rpic12D_3005 NC_012856.1 3171459 3171881 R KEGG: rso:RSc3072 hypothetical protein; hypothetical protein complement(3171459..3171881) Ralstonia pickettii 12D 8020687 YP_002982947.1 CDS Rpic12D_3006 NC_012856.1 3172218 3172445 R KEGG: rso:RSc3073 hypothetical protein; hypothetical protein complement(3172218..3172445) Ralstonia pickettii 12D 8020688 YP_002982948.1 CDS Rpic12D_3007 NC_012856.1 3172490 3172699 R KEGG: rso:RSc3074 hypothetical protein; hypothetical protein complement(3172490..3172699) Ralstonia pickettii 12D 8020689 YP_002982949.1 CDS Rpic12D_3008 NC_012856.1 3172984 3174198 D KEGG: bcj:BCAM1223 hypothetical protein; hypothetical protein 3172984..3174198 Ralstonia pickettii 12D 8020690 YP_002982950.1 CDS Rpic12D_3009 NC_012856.1 3174214 3175362 R TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: rso:RSc3077 hypothetical protein; cation diffusion facilitator family transporter complement(3174214..3175362) Ralstonia pickettii 12D 8020691 YP_002982951.1 CDS Rpic12D_3010 NC_012856.1 3175604 3176272 D PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; response regulator receiver; KEGG: rso:RSc3078 response regulator transcription regulator protein; two component LuxR family transcriptional regulator 3175604..3176272 Ralstonia pickettii 12D 8020692 YP_002982952.1 CDS Rpic12D_3011 NC_012856.1 3176277 3180587 D KEGG: rso:RSc3079 composite two component sensor histidine kinase and response regulator hybrid transcription regulator protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-3 domain protein; extracellular solute-binding protein family 3; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; extracellular solute-binding protein family 3; PAC repeat-containing protein; PAS domain containing protein; PAS/PAC sensor hybrid histidine kinase 3176277..3180587 Ralstonia pickettii 12D 8020693 YP_002982953.1 CDS Rpic12D_3012 NC_012856.1 3180733 3182355 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cti:RALTA_A3198 cyclohexanone monooxygenase, flavin-containing monooxygenase (FMO); cyclohexanone monooxygenase 3180733..3182355 Ralstonia pickettii 12D 8020694 YP_002982954.1 CDS Rpic12D_3013 NC_012856.1 3182384 3183274 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reh:H16_A3741 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 3182384..3183274 Ralstonia pickettii 12D 8020695 YP_002982955.1 CDS Rpic12D_3014 NC_012856.1 3183284 3184306 D PFAM: alpha/beta hydrolase fold; KEGG: cti:RALTA_A3200 enzyme, alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 3183284..3184306 Ralstonia pickettii 12D 8020696 YP_002982956.1 CDS Rpic12D_3015 NC_012856.1 3184303 3185199 D KEGG: rme:Rmet_3601 FF domain protein; FF domain-containing protein 3184303..3185199 Ralstonia pickettii 12D 8020697 YP_002982957.1 CDS Rpic12D_3016 NC_012856.1 3185291 3186109 R PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: rso:RSc3080 transcription regulator protein; MerR family transcriptional regulator complement(3185291..3186109) Ralstonia pickettii 12D 8020698 YP_002982958.1 CDS Rpic12D_3017 NC_012856.1 3186196 3187353 D PFAM: protein of unknown function DUF811; KEGG: rso:RSc3082 hypothetical protein; hypothetical protein 3186196..3187353 Ralstonia pickettii 12D 8020699 YP_002982959.1 CDS Rpic12D_3018 NC_012856.1 3187350 3188423 D PFAM: protein of unknown function DUF811; KEGG: bxe:Bxe_A1322 exported lipoprotein; hypothetical protein 3187350..3188423 Ralstonia pickettii 12D 8020700 YP_002982960.1 CDS Rpic12D_3019 NC_012856.1 3188440 3188853 R KEGG: rso:RSc3083 signal peptide protein; signal peptide protein complement(3188440..3188853) Ralstonia pickettii 12D 8020701 YP_002982961.1 CDS Rpic12D_3020 NC_012856.1 3189028 3189924 R PFAM: cytochrome C class I; KEGG: rso:RSc3084 hypothetical protein; class I cytochrome c complement(3189028..3189924) Ralstonia pickettii 12D 8020702 YP_002982962.1 CDS Rpic12D_3021 NC_012856.1 3190549 3191616 D catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 3190549..3191616 Ralstonia pickettii 12D 8020704 YP_002982963.1 CDS Rpic12D_3022 NC_012856.1 3191942 3192253 D PFAM: high potential iron-sulfur protein; KEGG: rso:RSc3086 high iron-sulfur signal peptide protein; high potential iron-sulfur protein 3191942..3192253 Ralstonia pickettii 12D 8020705 YP_002982964.1 CDS Rpic12D_3023 NC_012856.1 3192322 3193026 D PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: rso:RSc3087 response regulator transcription regulator protein; winged helix family two component transcriptional regulator 3192322..3193026 Ralstonia pickettii 12D 8020706 YP_002982965.1 CDS Rpic12D_3024 NC_012856.1 3193033 3194031 R PFAM: conserved hypothetical protein; KEGG: rso:RSc3088 signal peptide protein; hypothetical protein complement(3193033..3194031) Ralstonia pickettii 12D 8020707 YP_002982966.1 CDS Rpic12D_3025 NC_012856.1 3194177 3195307 R PFAM: porin Gram-negative type; KEGG: rso:RSc3091 outer membrane porin signal peptide protein; porin complement(3194177..3195307) Ralstonia pickettii 12D 8020708 YP_002982967.1 CDS Rpic12D_3026 NC_012856.1 3195805 3196089 D KEGG: rso:RSc3092 signal peptide protein; signal peptide protein 3195805..3196089 Ralstonia pickettii 12D 8020709 YP_002982968.1 CDS Rpic12D_3027 NC_012856.1 3196231 3198429 R PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: bph:Bphy_4727 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; molybdopterin-binding aldehyde oxidase and xanthine dehydrogenase complement(3196231..3198429) Ralstonia pickettii 12D 8020710 YP_002982969.1 CDS Rpic12D_3028 NC_012856.1 3198426 3199448 R PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: cti:RALTA_B0901 xanthine dehydrogenase , with FAD-binding domain; molybdopterin dehydrogenase FAD-binding complement(3198426..3199448) Ralstonia pickettii 12D 8020711 YP_002982970.1 CDS Rpic12D_3029 NC_012856.1 3199458 3200198 R PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: bxe:Bxe_B2224 2Fe-2S ferredoxin; (2Fe-2S)-binding domain-containing protein complement(3199458..3200198) Ralstonia pickettii 12D 8020712 YP_002982971.1 CDS Rpic12D_3030 NC_012856.1 3200361 3201671 R catalyzes the release of C-terminal glutamate residues from N-acylating moieties; glutamate carboxypeptidase complement(3200361..3201671) Ralstonia pickettii 12D 8020713 YP_002982972.1 CDS Rpic12D_3031 NC_012856.1 3201855 3202649 D PFAM: Domain of unknown function DUF1835; KEGG: rso:RSc3094 hypothetical protein; hypothetical protein 3201855..3202649 Ralstonia pickettii 12D 8020714 YP_002982973.1 CDS Rpic12D_3032 NC_012856.1 3202729 3204669 R transport system that facilitates potassium-efflux; glutathione-regulated potassium-efflux system protein KefC complement(3202729..3204669) Ralstonia pickettii 12D 8020715 YP_002982974.1 CDS Rpic12D_3033 NC_012856.1 3204693 3205250 R PFAM: NAD(P)H dehydrogenase (quinone); KEGG: rso:RSc3097 NAD(P)H oxidoreductase (NAD(P)H dehydrogenase (quinone)) oxidoreductase protein; NAD(P)H dehydrogenase (quinone) complement(3204693..3205250) Ralstonia pickettii 12D 8020716 YP_002982975.1 CDS Rpic12D_3034 NC_012856.1 3205650 3206345 D PFAM: GCN5-related N-acetyltransferase; KEGG: rso:RSc3098 hypothetical protein; N-acetyltransferase GCN5 3205650..3206345 Ralstonia pickettii 12D 8020717 YP_002982976.1 CDS Rpic12D_3035 NC_012856.1 3206554 3207045 D KEGG: rso:RSc3099 signal peptide protein; signal peptide protein 3206554..3207045 Ralstonia pickettii 12D 8020718 YP_002982977.1 CDS Rpic12D_3036 NC_012856.1 3207170 3207913 D PFAM: peptidoglycan-binding LysM; SMART: peptidoglycan-binding LysM; KEGG: aav:Aave_0037 peptidoglycan-binding LysM; peptidoglycan-binding LysM 3207170..3207913 Ralstonia pickettii 12D 8020719 YP_002982978.1 CDS Rpic12D_3037 NC_012856.1 3207904 3208317 D KEGG: bac:BamMC406_2265 hypothetical protein; hypothetical protein 3207904..3208317 Ralstonia pickettii 12D 8020720 YP_002982979.1 CDS Rpic12D_3038 NC_012856.1 3208339 3208776 D KEGG: bur:Bcep18194_A5513 hypothetical protein; hypothetical protein 3208339..3208776 Ralstonia pickettii 12D 8020721 YP_002982980.1 CDS Rpic12D_3039 NC_012856.1 3208842 3208955 R hypothetical protein complement(3208842..3208955) Ralstonia pickettii 12D 8020722 YP_002982981.1 CDS Rpic12D_3040 NC_012856.1 3209205 3209693 R PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: rso:RSc3102 transcription regulator protein; AsnC family transcriptional regulator complement(3209205..3209693) Ralstonia pickettii 12D 8020723 YP_002982982.1 CDS Rpic12D_3041 NC_012856.1 3209849 3210955 D KEGG: rso:RSc3103 4-hydroxyphenylpyruvate dioxygenase oxidoreductase protein; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; 4-hydroxyphenylpyruvate dioxygenase 3209849..3210955 Ralstonia pickettii 12D 8020724 YP_002982983.1 CDS Rpic12D_3042 NC_012856.1 3211174 3211791 R PFAM: Calcium-binding EF-hand-containing protein; SMART: Calcium-binding EF-hand-containing protein; KEGG: rso:RSc3104 calcium binding signal peptide protein; putative signal transduction protein with EFhand domain-containing protein complement(3211174..3211791) Ralstonia pickettii 12D 8020725 YP_002982984.1 CDS Rpic12D_3043 NC_012856.1 3211930 3212613 R KEGG: rso:RSc3105 general secretion pathway related transmembrane protein; general secretion pathway related transmembrane protein complement(3211930..3212613) Ralstonia pickettii 12D 8020726 YP_002982985.1 CDS Rpic12D_3044 NC_012856.1 3212788 3213267 D TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: rso:RSc3106 general secretion pathway G transmembrane protein; general secretion pathway protein G 3212788..3213267 Ralstonia pickettii 12D 8020727 YP_002982986.1 CDS Rpic12D_3045 NC_012856.1 3213291 3213785 D TIGRFAM: general secretion pathway protein H; KEGG: rso:RSc3107 general secretory pathway H transmembrane protein; general secretion pathway protein H 3213291..3213785 Ralstonia pickettii 12D 8020728 YP_002982987.1 CDS Rpic12D_3046 NC_012856.1 3213782 3214180 D TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; KEGG: rso:RSc3108 general secretory pathway I transmembrane protein; general secretion pathway protein I 3213782..3214180 Ralstonia pickettii 12D 8020729 YP_002982988.1 CDS Rpic12D_3047 NC_012856.1 3214170 3214892 D KEGG: rso:RSc3109 general secretory pathway J transmembrane protein; general secretory pathway J transmembrane protein 3214170..3214892 Ralstonia pickettii 12D 8020730 YP_002982989.1 CDS Rpic12D_3048 NC_012856.1 3214894 3215982 D PFAM: general secretion pathway protein K; KEGG: rso:RSc3110 general secretory pathway K transmembrane protein; general secretion pathway protein K 3214894..3215982 Ralstonia pickettii 12D 8020731 YP_002982990.1 CDS Rpic12D_3049 NC_012856.1 3216144 3217580 D PFAM: general secretion pathway L; KEGG: rso:RSc3111 general secretory pathway L transmembrane protein; general secretion pathway L 3216144..3217580 Ralstonia pickettii 12D 8020732 YP_002982991.1 CDS Rpic12D_3050 NC_012856.1 3217591 3218160 D PFAM: general secretion pathway M protein; KEGG: rso:RSc3112 general secretory pathway M transmembrane protein; general secretion pathway M protein 3217591..3218160 Ralstonia pickettii 12D 8020733 YP_002982992.1 CDS Rpic12D_3051 NC_012856.1 3218178 3219020 D KEGG: rso:RSc3113 general secretory pathway N transmembrane protein; general secretory pathway N transmembrane protein 3218178..3219020 Ralstonia pickettii 12D 8020734 YP_002982993.1 CDS Rpic12D_3052 NC_012856.1 3219058 3221469 D TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; KEGG: rso:RSc3114 general secretory pathway D transmembrane protein; general secretion pathway protein D 3219058..3221469 Ralstonia pickettii 12D 8020735 YP_002982994.1 CDS Rpic12D_3053 NC_012856.1 3221486 3223042 D KEGG: rso:RSc3115 general secretion pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase; general secretory pathway protein E 3221486..3223042 Ralstonia pickettii 12D 8020736 YP_002982995.1 CDS Rpic12D_3054 NC_012856.1 3223065 3224276 D TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: rso:RSc3116 general secretory pathway F transmembrane protein; general secretion pathway protein F 3223065..3224276 Ralstonia pickettii 12D 8020737 YP_002982996.1 CDS Rpic12D_3055 NC_012856.1 3224782 3225852 D PFAM: integrase catalytic region; KEGG: rme:Rmet_6282 integrase, catalytic region; Integrase catalytic subunit 3224782..3225852 Ralstonia pickettii 12D 8020738 YP_002982997.1 CDS Rpic12D_3056 NC_012856.1 3225981 3226664 R KEGG: bte:BTH_II1692 hypothetical protein; hypothetical protein complement(3225981..3226664) Ralstonia pickettii 12D 8020739 YP_002982998.1 CDS Rpic12D_3058 NC_012856.1 3228506 3232066 D Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; indolepyruvate ferredoxin oxidoreductase 3228506..3232066 Ralstonia pickettii 12D 8020741 YP_002982999.1 CDS sbcB NC_012856.1 3232144 3233583 R Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates; exonuclease I complement(3232144..3233583) Ralstonia pickettii 12D 8020742 YP_002983000.1 CDS Rpic12D_3060 NC_012856.1 3233726 3234721 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: rso:RSc3131 D-lactate dehydrogenase; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 3233726..3234721 Ralstonia pickettii 12D 8020743 YP_002983001.1 CDS Rpic12D_3061 NC_012856.1 3234731 3235360 R KEGG: reh:H16_A3548 predicted HD phosphohydrolase; HD phosphohydrolase complement(3234731..3235360) Ralstonia pickettii 12D 8020744 YP_002983002.1 CDS Rpic12D_3062 NC_012856.1 3235521 3236219 D PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: reu:Reut_A0894 cyclic nucleotide-binding; Crp/Fnr family transcriptional regulator 3235521..3236219 Ralstonia pickettii 12D 8020745 YP_002983003.1 CDS Rpic12D_3063 NC_012856.1 3236449 3237261 D KEGG: rso:RSc3135 hypothetical protein; hypothetical protein 3236449..3237261 Ralstonia pickettii 12D 8020746 YP_002983004.1 CDS Rpic12D_3064 NC_012856.1 3237341 3238501 R PFAM: porin Gram-negative type; KEGG: rso:RSc2933 porin signal peptide protein; porin complement(3237341..3238501) Ralstonia pickettii 12D 8020747 YP_002983005.1 CDS Rpic12D_3065 NC_012856.1 3238897 3239481 R PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: bpy:Bphyt_6866 two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator complement(3238897..3239481) Ralstonia pickettii 12D 8020748 YP_002983006.1 CDS Rpic12D_3066 NC_012856.1 3239623 3241611 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: rso:RSc3136 methyl-accepting chemotaxis transmembrane protein; methyl-accepting chemotaxis sensory transducer complement(3239623..3241611) Ralstonia pickettii 12D 8020749 YP_002983007.1 CDS Rpic12D_3067 NC_012856.1 3241732 3244491 R KEGG: rso:RSc3137 hypothetical protein; hypothetical protein complement(3241732..3244491) Ralstonia pickettii 12D 8020750 YP_002983008.1 CDS Rpic12D_3068 NC_012856.1 3244612 3244839 R hypothetical protein complement(3244612..3244839) Ralstonia pickettii 12D 8020751 YP_002983009.1 CDS Rpic12D_3069 NC_012856.1 3245037 3245873 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rso:RSc3138 oxidoreductase protein; short-chain dehydrogenase/reductase SDR complement(3245037..3245873) Ralstonia pickettii 12D 8020752 YP_002983010.1 CDS Rpic12D_3070 NC_012856.1 3246108 3246596 D PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rso:RSc3139 transcription regulator protein; MarR family transcriptional regulator 3246108..3246596 Ralstonia pickettii 12D 8020753 YP_002983011.1 CDS Rpic12D_3071 NC_012856.1 3246679 3247377 R PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: bam:Bamb_2835 two component LuxR family transcriptional regulator; two component LuxR family transcriptional regulator complement(3246679..3247377) Ralstonia pickettii 12D 8020754 YP_002983012.1 CDS Rpic12D_3072 NC_012856.1 3247483 3248403 R KEGG: rso:RSc3140 serine protease protein; serine protease protein complement(3247483..3248403) Ralstonia pickettii 12D 8020755 YP_002983013.1 CDS Rpic12D_3073 NC_012856.1 3248423 3248989 R KEGG: rso:RSc3141 lipoprotein transmembrane; lipoprotein transmembrane complement(3248423..3248989) Ralstonia pickettii 12D 8020756 YP_002983014.1 CDS Rpic12D_3074 NC_012856.1 3249150 3249758 R PFAM: regulatory protein TetR; KEGG: bbr:BB2329 TetR family transcriptional regulator; TetR family transcriptional regulator complement(3249150..3249758) Ralstonia pickettii 12D 8020757 YP_002983015.1 CDS Rpic12D_3075 NC_012856.1 3249800 3251329 D PFAM: major facilitator superfamily MFS_1; KEGG: bbr:BB2330 membrane efflux protein; major facilitator superfamily protein 3249800..3251329 Ralstonia pickettii 12D 8020758 YP_002983016.1 CDS Rpic12D_3076 NC_012856.1 3251336 3251935 R PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: rso:RSc3142 transport transmembrane protein; PA-phosphatase-like phosphoesterase complement(3251336..3251935) Ralstonia pickettii 12D 8020759 YP_002983017.1 CDS Rpic12D_3077 NC_012856.1 3252871 3254007 D KEGG: bvi:Bcep1808_1534 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor signal transduction histidine kinase 3252871..3254007 Ralstonia pickettii 12D 8020760 YP_002983018.1 CDS Rpic12D_3078 NC_012856.1 3254001 3254147 R hypothetical protein complement(3254001..3254147) Ralstonia pickettii 12D 8020761 YP_002983019.1 CDS Rpic12D_3079 NC_012856.1 3254410 3255780 R PFAM: amino acid permease-associated region; KEGG: reu:Reut_B4004 amino acid permease-associated region; amino acid permease-associated protein complement(3254410..3255780) Ralstonia pickettii 12D 8020762 YP_002983020.1 CDS Rpic12D_3080 NC_012856.1 3256112 3256363 R KEGG: bam:Bamb_6391 hypothetical protein; hypothetical protein complement(3256112..3256363) Ralstonia pickettii 12D 8020763 YP_002983021.1 CDS groEL NC_012856.1 3256474 3258096 R 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is not essential for growth; chaperonin GroEL complement(3256474..3258096) Ralstonia pickettii 12D 8020764 YP_002983022.1 CDS Rpic12D_3082 NC_012856.1 3258194 3258511 R PFAM: chaperonin Cpn10; KEGG: bmj:BMULJ_03266 chaperonin GroES; chaperonin Cpn10 complement(3258194..3258511) Ralstonia pickettii 12D 8020765 YP_002983023.1 CDS Rpic12D_3083 NC_012856.1 3258685 3259329 R KEGG: bmj:BMULJ_03265 dihydroxyacid dehydratase/phosphogluconate dehydratase; dihydroxyacid dehydratase/phosphogluconate dehydratase complement(3258685..3259329) Ralstonia pickettii 12D 8020766 YP_002983024.1 CDS Rpic12D_3084 NC_012856.1 3259519 3259962 D PFAM: heat shock protein Hsp20; KEGG: bmv:BMASAVP1_A0343 HSP20 family protein; heat shock protein Hsp20 3259519..3259962 Ralstonia pickettii 12D 8020767 YP_002983025.1 CDS Rpic12D_3085 NC_012856.1 3259996 3260415 D PFAM: heat shock protein Hsp20; KEGG: bpd:BURPS668_3388 HSP20 family protein; heat shock protein Hsp20 3259996..3260415 Ralstonia pickettii 12D 8020768 YP_002983026.1 CDS Rpic12D_3086 NC_012856.1 3260522 3260767 D KEGG: bpl:BURPS1106A_3421 hypothetical protein; hypothetical protein 3260522..3260767 Ralstonia pickettii 12D 8020769 YP_002983027.1 CDS Rpic12D_3087 NC_012856.1 3260897 3262213 R KEGG: bte:BTH_I0935 hypothetical protein; hypothetical protein complement(3260897..3262213) Ralstonia pickettii 12D 8020770 YP_002983028.1 CDS Rpic12D_3088 NC_012856.1 3262354 3263160 R KEGG: bpy:Bphyt_2961 hypothetical protein; hypothetical protein complement(3262354..3263160) Ralstonia pickettii 12D 8020771 YP_002983029.1 CDS Rpic12D_3089 NC_012856.1 3263160 3263876 R PFAM: peptidase C39 bacteriocin processing; KEGG: bxe:Bxe_A1024 peptidase; peptidase C39 bacteriocin processing complement(3263160..3263876) Ralstonia pickettii 12D 8020772 YP_002983030.1 CDS Rpic12D_3090 NC_012856.1 3263943 3264722 R KEGG: bpy:Bphyt_2959 hypothetical protein; hypothetical protein complement(3263943..3264722) Ralstonia pickettii 12D 8020773 YP_002983031.1 CDS Rpic12D_3091 NC_012856.1 3264749 3265357 R KEGG: bpy:Bphyt_2958 conserved hypothetical signal peptide protein; hypothetical protein complement(3264749..3265357) Ralstonia pickettii 12D 8020774 YP_002983032.1 CDS Rpic12D_3092 NC_012856.1 3265354 3265863 R KEGG: bte:BTH_I0930 hypothetical protein; hypothetical protein complement(3265354..3265863) Ralstonia pickettii 12D 8020775 YP_002983033.1 CDS Rpic12D_3093 NC_012856.1 3266256 3267236 D PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: afe:Lferr_0114 alpha/beta hydrolase fold-3 domain protein; alpha/beta hydrolase 3266256..3267236 Ralstonia pickettii 12D 8020776 YP_002983034.1 CDS Rpic12D_3094 NC_012856.1 3267520 3267846 R PFAM: ethyl tert-butyl ether degradation EthD; KEGG: reu:Reut_B5694 ethyl tert-butyl ether degradation EthD; ethyl tert-butyl ether degradation EthD complement(3267520..3267846) Ralstonia pickettii 12D 8020777 YP_002983035.1 CDS Rpic12D_3095 NC_012856.1 3267867 3268301 R hypothetical protein complement(3267867..3268301) Ralstonia pickettii 12D 8020778 YP_002983036.1 CDS Rpic12D_3096 NC_012856.1 3268335 3268766 R hypothetical protein complement(3268335..3268766) Ralstonia pickettii 12D 8020779 YP_002983037.1 CDS Rpic12D_3097 NC_012856.1 3268949 3269410 D PFAM: regulatory protein MarR; transcriptional regulator PadR family protein; Penicillinase repressor; SMART: regulatory protein MarR; KEGG: rso:RS02614 transcription regulator protein; MarR family transcriptional regulator 3268949..3269410 Ralstonia pickettii 12D 8020780 YP_002983038.1 CDS Rpic12D_3098 NC_012856.1 3269551 3269976 D PFAM: OsmC family protein; KEGG: rso:RSp1107 organic hydroperoxide resistance protein; OsmC family protein 3269551..3269976 Ralstonia pickettii 12D 8020781 YP_002983039.1 CDS Rpic12D_3100 NC_012856.1 3270709 3271962 D KEGG: rso:RSc0639 heat shock protein; heat shock protein 3270709..3271962 Ralstonia pickettii 12D 8020783 YP_002983040.1 CDS Rpic12D_3101 NC_012856.1 3272018 3272188 R KEGG: bph:Bphy_7370 hypothetical protein; hypothetical protein complement(3272018..3272188) Ralstonia pickettii 12D 8020784 YP_002983041.1 CDS Rpic12D_3102 NC_012856.1 3272542 3273102 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rso:RS03915 thiol:disulfide interchange protein; alkyl hydroperoxide reductase complement(3272542..3273102) Ralstonia pickettii 12D 8020785 YP_002983042.1 CDS Rpic12D_3103 NC_012856.1 3273092 3274135 R KEGG: rso:RS03914 lipoprotein; lipoprotein complement(3273092..3274135) Ralstonia pickettii 12D 8020786 YP_002983043.1 CDS Rpic12D_3104 NC_012856.1 3274224 3274601 R KEGG: rso:RS03913 signal peptide protein; signal peptide protein complement(3274224..3274601) Ralstonia pickettii 12D 8020787 YP_002983044.1 CDS Rpic12D_3105 NC_012856.1 3274847 3275212 R KEGG: rso:RSc3434 hypothetical protein; hypothetical protein complement(3274847..3275212) Ralstonia pickettii 12D 8020788 YP_002983045.1 CDS Rpic12D_3106 NC_012856.1 3275918 3276391 D KEGG: ava:Ava_4685 hypothetical protein; hypothetical protein 3275918..3276391 Ralstonia pickettii 12D 8020789 YP_002983046.1 CDS Rpic12D_3107 NC_012856.1 3276628 3278436 R KEGG: tye:THEYE_A0519 hypothetical protein; hypothetical protein complement(3276628..3278436) Ralstonia pickettii 12D 8020790 YP_002983047.1 CDS Rpic12D_3108 NC_012856.1 3279040 3279282 D hypothetical protein 3279040..3279282 Ralstonia pickettii 12D 8020791 YP_002983048.1 CDS Rpic12D_3109 NC_012856.1 3279812 3280774 R KEGG: fal:FRAAL1724 hypothetical protein; hypothetical protein complement(3279812..3280774) Ralstonia pickettii 12D 8020792 YP_002983049.1 CDS Rpic12D_3110 NC_012856.1 3280713 3281474 R KEGG: fal:FRAAL1725 hypothetical protein; hypothetical protein complement(3280713..3281474) Ralstonia pickettii 12D 8020793 YP_002983050.1 CDS Rpic12D_3111 NC_012856.1 3281535 3283832 R KEGG: pde:Pden_3325 hypothetical protein; hypothetical protein complement(3281535..3283832) Ralstonia pickettii 12D 8020794 YP_002983051.1 CDS Rpic12D_3112 NC_012856.1 3283822 3284052 R hypothetical protein complement(3283822..3284052) Ralstonia pickettii 12D 8020795 YP_002983052.1 CDS Rpic12D_3113 NC_012856.1 3284694 3284993 R KEGG: sty:STY2069 hypothetical protein; hypothetical protein complement(3284694..3284993) Ralstonia pickettii 12D 8020796 YP_002983053.1 CDS Rpic12D_3114 NC_012856.1 3286157 3288958 R KEGG: reu:Reut_A2198 hypothetical protein; hypothetical protein complement(3286157..3288958) Ralstonia pickettii 12D 8020797 YP_002983054.1 CDS Rpic12D_3115 NC_012856.1 3288967 3289305 R PFAM: protein of unknown function DUF1484; KEGG: reu:Reut_A2197 hypothetical protein; hypothetical protein complement(3288967..3289305) Ralstonia pickettii 12D 8020798 YP_002983055.1 CDS Rpic12D_3116 NC_012856.1 3289298 3289474 R KEGG: rso:RSc0965 hypothetical protein; hypothetical protein complement(3289298..3289474) Ralstonia pickettii 12D 8020799 YP_002983056.1 CDS Rpic12D_3117 NC_012856.1 3289723 3289989 R PFAM: transcriptional activator Ogr/delta; KEGG: reu:Reut_A2195 phage transcriptional activator, Ogr/delta; transcriptional activator Ogr/delta complement(3289723..3289989) Ralstonia pickettii 12D 8020800 YP_002983057.1 CDS Rpic12D_3118 NC_012856.1 3290035 3290253 R hypothetical protein complement(3290035..3290253) Ralstonia pickettii 12D 8020801 YP_002983058.1 CDS Rpic12D_3119 NC_012856.1 3290268 3290975 R KEGG: rso:RSc0963 hypothetical protein; hypothetical protein complement(3290268..3290975) Ralstonia pickettii 12D 8020802 YP_002983059.1 CDS Rpic12D_3120 NC_012856.1 3290986 3291246 R PFAM: Prophage CP4-57 regulatory; KEGG: reu:Reut_A2193 prophage CP4-57 regulatory; phage transcriptional regulator AlpA complement(3290986..3291246) Ralstonia pickettii 12D 8020803 YP_002983060.1 CDS Rpic12D_3121 NC_012856.1 3292197 3292901 R KEGG: reu:Reut_A2192 hypothetical protein; hypothetical protein complement(3292197..3292901) Ralstonia pickettii 12D 8020804 YP_002983061.1 CDS Rpic12D_3122 NC_012856.1 3293128 3294342 R PFAM: integrase family protein; KEGG: rso:RSc1871 integrase prophage protein; integrase family protein complement(3293128..3294342) Ralstonia pickettii 12D 8020805 YP_002983062.1 CDS Rpic12D_3123 NC_012856.1 3294628 3296349 R PFAM: 5'-nucleotidase; KEGG: rso:RSc3253 sulfur oxidation signal peptide protein; 5'-nucleotidase complement(3294628..3296349) Ralstonia pickettii 12D 8020807 YP_002983063.1 CDS Rpic12D_3124 NC_012856.1 3296346 3296858 R PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: rso:RSc3254 hypothetical protein; alkyl hydroperoxide reductase complement(3296346..3296858) Ralstonia pickettii 12D 8020808 YP_002983064.1 CDS Rpic12D_3125 NC_012856.1 3296871 3297533 R KEGG: rso:RSc3255 hypothetical protein; hypothetical protein complement(3296871..3297533) Ralstonia pickettii 12D 8020809 YP_002983065.1 CDS Rpic12D_3126 NC_012856.1 3297550 3298371 R KEGG: rso:RSc3256 hypothetical protein; hypothetical protein complement(3297550..3298371) Ralstonia pickettii 12D 8020810 YP_002983066.1 CDS Rpic12D_3127 NC_012856.1 3298391 3298846 R PFAM: Domain of unknown function DUF1791; KEGG: rso:RSc3257 signal peptide protein; hypothetical protein complement(3298391..3298846) Ralstonia pickettii 12D 8020811 YP_002983067.1 CDS Rpic12D_3128 NC_012856.1 3298870 3299181 R PFAM: sulfur oxidation protein SoxZ; KEGG: rso:RSc3258 hypothetical protein; sulfur oxidation protein SoxZ complement(3298870..3299181) Ralstonia pickettii 12D 8020812 YP_002983068.1 CDS Rpic12D_3129 NC_012856.1 3299201 3299671 R KEGG: rso:RSc3259 hypothetical protein; hypothetical protein complement(3299201..3299671) Ralstonia pickettii 12D 8020813 YP_002983069.1 CDS Rpic12D_3130 NC_012856.1 3299682 3300029 R PFAM: cytochrome C class I; KEGG: rso:RSc3260 cytochrome C transmembrane protein; class I cytochrome c complement(3299682..3300029) Ralstonia pickettii 12D 8020814 YP_002983070.1 CDS Rpic12D_3131 NC_012856.1 3300206 3301093 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RSc3261 hypothetical protein; hypothetical protein complement(3300206..3301093) Ralstonia pickettii 12D 8020815 YP_002983071.1 CDS Rpic12D_3132 NC_012856.1 3301216 3302508 R PFAM: Flavocytochrome C sulphide dehydrogenase flavin-binding; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rso:RSc3262 sulfide dehydrogenase flavocytochrome C oxidoreductase protein; flavocytochrome c sulfide dehydrogenase complement(3301216..3302508) Ralstonia pickettii 12D 8020816 YP_002983072.1 CDS Rpic12D_3133 NC_012856.1 3302505 3302861 R KEGG: rso:RSc3263 signal peptide protein; signal peptide protein complement(3302505..3302861) Ralstonia pickettii 12D 8020817 YP_002983073.1 CDS Rpic12D_3134 NC_012856.1 3302995 3303813 R PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: rso:RSc3264 signal peptide protein; transport-associated complement(3302995..3303813) Ralstonia pickettii 12D 8020818 YP_002983074.1 CDS Rpic12D_3135 NC_012856.1 3303865 3304242 R PFAM: protein of unknown function UPF0102; KEGG: rso:RSc3265 hypothetical protein; hypothetical protein complement(3303865..3304242) Ralstonia pickettii 12D 8020819 YP_002983075.1 CDS Rpic12D_3136 NC_012856.1 3304278 3305180 D PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: rso:RSc3266 hypothetical protein; uroporphyrin-III C/tetrapyrrole methyltransferase 3304278..3305180 Ralstonia pickettii 12D 8020820 YP_002983076.1 CDS Rpic12D_3137 NC_012856.1 3305208 3305960 R TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: rso:RSc3267 lipoprotein; rare lipoprotein A complement(3305208..3305960) Ralstonia pickettii 12D 8020821 YP_002983077.1 CDS Rpic12D_3138 NC_012856.1 3306141 3306797 D PFAM: beta-lactamase domain protein; KEGG: rso:RSc3268 hypothetical protein; beta-lactamase domain-containing protein 3306141..3306797 Ralstonia pickettii 12D 8020822 YP_002983078.1 CDS Rpic12D_3139 NC_012856.1 3306794 3307513 D KEGG: rso:RSc3269 hypothetical protein; hypothetical protein 3306794..3307513 Ralstonia pickettii 12D 8020823 YP_002983079.1 CDS Rpic12D_3140 NC_012856.1 3307832 3308062 D KEGG: rso:RSc3270 hypothetical protein; hypothetical protein 3307832..3308062 Ralstonia pickettii 12D 8020824 YP_002983080.1 CDS Rpic12D_3141 NC_012856.1 3308188 3308538 R TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: rso:RSc3271 arsenate reductase oxidoreductase protein; arsenate reductase complement(3308188..3308538) Ralstonia pickettii 12D 8020825 YP_002983081.1 CDS Rpic12D_3142 NC_012856.1 3308740 3309990 D PFAM: transposase mutator type; KEGG: rso:RSp0478 ISRSO7-transposase protein; transposase mutator type 3308740..3309990 Ralstonia pickettii 12D 8020826 YP_002983082.1 CDS Rpic12D_3143 NC_012856.1 3310123 3311397 R PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rso:RSc3273 hypothetical protein; peptidase M20 complement(3310123..3311397) Ralstonia pickettii 12D 8020827 YP_002983083.1 CDS Rpic12D_3144 NC_012856.1 3311490 3312017 R catalyzes the formation of glyoxylate from (S)-ureidoglycolate; ureidoglycolate hydrolase complement(3311490..3312017) Ralstonia pickettii 12D 8020828 YP_002983084.1 CDS Rpic12D_3145 NC_012856.1 3312014 3313024 R catalyzes the formation of S-ureidoglycolate and urea from allantoate; allantoicase complement(3312014..3313024) Ralstonia pickettii 12D 8020829 YP_002983085.1 CDS Rpic12D_3146 NC_012856.1 3313368 3314708 D involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA 3313368..3314708 Ralstonia pickettii 12D 8020830 YP_002983086.1 CDS Rpic12D_3147 NC_012856.1 3314701 3315441 D PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: rso:RSc3276 transcription regulator protein; GntR family transcriptional regulator 3314701..3315441 Ralstonia pickettii 12D 8020831 YP_002983087.1 CDS Rpic12D_3148 NC_012856.1 3315448 3316032 D PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: rso:RSc3277 hypothetical protein; hypothetical protein 3315448..3316032 Ralstonia pickettii 12D 8020832 YP_002983088.1 CDS Rpic12D_3149 NC_012856.1 3316036 3316494 R KEGG: bcm:Bcenmc03_5196 hypothetical protein; hypothetical protein complement(3316036..3316494) Ralstonia pickettii 12D 8020833 YP_002983089.1 CDS Rpic12D_3150 NC_012856.1 3316573 3317484 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RSc3280 transcription regulator protein; LysR family transcriptional regulator complement(3316573..3317484) Ralstonia pickettii 12D 8020834 YP_002983090.1 CDS Rpic12D_3151 NC_012856.1 3317832 3319619 D catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate; glyoxylate carboligase 3317832..3319619 Ralstonia pickettii 12D 8020835 YP_002983091.1 CDS Rpic12D_3152 NC_012856.1 3319663 3320445 D KEGG: rso:RSc3282 hydroxypyruvate isomerase protein; TIGRFAM: hydroxypyruvate isomerase; PFAM: Xylose isomerase domain protein TIM barrel; hydroxypyruvate isomerase 3319663..3320445 Ralstonia pickettii 12D 8020836 YP_002983092.1 CDS Rpic12D_3153 NC_012856.1 3321080 3321994 D KEGG: rso:RSc3283 transmembrane 2-hydroxy-3-oxopropionate reductase oxidoreductase protein; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; NADP oxidoreductase coenzyme F420-dependent; 2-hydroxy-3-oxopropionate reductase 3321080..3321994 Ralstonia pickettii 12D 8020837 YP_002983093.1 CDS Rpic12D_3154 NC_012856.1 3322071 3323390 D PFAM: MOFRL domain protein; KEGG: reh:H16_A3601 hydroxypyruvate reductase; hydroxypyruvate reductase 3322071..3323390 Ralstonia pickettii 12D 8020838 YP_002983094.1 CDS Rpic12D_3155 NC_012856.1 3324005 3325483 D KEGG: cti:RALTA_A3056 pyruvate kinase; tartrate degradation; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; pyruvate kinase 3324005..3325483 Ralstonia pickettii 12D 8020839 YP_002983095.1 CDS Rpic12D_3156 NC_012856.1 3325508 3326992 R catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase complement(3325508..3326992) Ralstonia pickettii 12D 8020840 YP_002983096.1 CDS Rpic12D_3157 NC_012856.1 3327247 3328335 D PFAM: extracellular ligand-binding receptor; KEGG: rso:RSc3285 Leu/Ile/Val-binding signal peptide protein; extracellular ligand-binding receptor 3327247..3328335 Ralstonia pickettii 12D 8020841 YP_002983097.1 CDS Rpic12D_3158 NC_012856.1 3328898 3331018 R PFAM: UvrD/REP helicase; KEGG: rso:RSc3289 ATP-dependent DNA helicase REP protein; UvrD/REP helicase complement(3328898..3331018) Ralstonia pickettii 12D 8020842 YP_002983098.1 CDS Rpic12D_3159 NC_012856.1 3331292 3331618 D KEGG: rso:RSc3291 hypothetical protein; hypothetical protein 3331292..3331618 Ralstonia pickettii 12D 8020843 YP_002983099.1 CDS gcvT NC_012856.1 3332146 3333273 D catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 3332146..3333273 Ralstonia pickettii 12D 8020844 YP_002983100.1 CDS Rpic12D_3161 NC_012856.1 3333321 3333701 D part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 3333321..3333701 Ralstonia pickettii 12D 8020845 YP_002983101.1 CDS Rpic12D_3162 NC_012856.1 3333786 3336725 D acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 3333786..3336725 Ralstonia pickettii 12D 8020846 YP_002983102.1 CDS Rpic12D_3163 NC_012856.1 3336888 3338006 D KEGG: bte:BTH_I3252 hypothetical protein; hypothetical protein 3336888..3338006 Ralstonia pickettii 12D 8020847 YP_002983103.1 CDS Rpic12D_3164 NC_012856.1 3338103 3339479 D KEGG: rso:RSc3296 L-serine dehydratase; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 1 3338103..3339479 Ralstonia pickettii 12D 8020848 YP_002983104.1 CDS Rpic12D_3165 NC_012856.1 3339587 3340657 R PFAM: integrase catalytic region; KEGG: rme:Rmet_6282 integrase, catalytic region; Integrase catalytic subunit complement(3339587..3340657) Ralstonia pickettii 12D 8020849 YP_002983105.1 CDS Rpic12D_3166 NC_012856.1 3341252 3343306 D TIGRFAM: oligopeptide transporter, OPT family; oligopeptide transporters, OPT superfamily; PFAM: Oligopeptide transporter OPT superfamily protein; KEGG: rso:RSc3297 hypothetical protein; oligopeptide transporter 3341252..3343306 Ralstonia pickettii 12D 8020850 YP_002983106.1 CDS Rpic12D_3167 NC_012856.1 3343321 3343836 D PFAM: GCN5-related N-acetyltransferase; KEGG: ppw:PputW619_4638 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 3343321..3343836 Ralstonia pickettii 12D 8020851 YP_002983107.1 CDS Rpic12D_3168 NC_012856.1 3343855 3344988 R ATP-dependent; carboxylate-amine ligase with weak glutamate--cysteine ligase activity; carboxylate-amine ligase complement(3343855..3344988) Ralstonia pickettii 12D 8020852 YP_002983108.1 CDS Rpic12D_3169 NC_012856.1 3344998 3346239 R PFAM: sodium/hydrogen exchanger; KEGG: rso:RSc3299 hypothetical protein; sodium/hydrogen exchanger complement(3344998..3346239) Ralstonia pickettii 12D 8020853 YP_002983109.1 CDS Rpic12D_3170 NC_012856.1 3346420 3347565 R PFAM: extracellular ligand-binding receptor; KEGG: rso:RSc3300 amino-acid transport signal peptide protein; extracellular ligand-binding receptor complement(3346420..3347565) Ralstonia pickettii 12D 8020854 YP_002983110.1 CDS putA NC_012856.1 3347696 3351676 R proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase complement(3347696..3351676) Ralstonia pickettii 12D 8020855 YP_002983111.1 CDS Rpic12D_3172 NC_012856.1 3352071 3353321 R PFAM: transposase mutator type; KEGG: rso:RSp0478 ISRSO7-transposase protein; transposase mutator type complement(3352071..3353321) Ralstonia pickettii 12D 8020856 YP_002983112.1 CDS Rpic12D_3173 NC_012856.1 3353774 3356071 R binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA complement(3353774..3356071) Ralstonia pickettii 12D 8020857 YP_002983113.1 CDS hemE NC_012856.1 3356653 3357756 R catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase complement(3356653..3357756) Ralstonia pickettii 12D 8020858 YP_002983114.1 CDS Rpic12D_3175 NC_012856.1 3357851 3358336 R PFAM: cupin; Cupin domain protein; KEGG: rso:RSc3304 signal peptide protein; cupin complement(3357851..3358336) Ralstonia pickettii 12D 8020859 YP_002983115.1 CDS Rpic12D_3176 NC_012856.1 3358720 3360522 R PFAM: chemotaxis sensory transducer; Cache domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: rso:RSc3307 methyl-accepting chemotaxis transmembrane protein; Cache sensor-containing methyl-accepting chemotaxis sensory transducer complement(3358720..3360522) Ralstonia pickettii 12D 8020860 YP_002983116.1 CDS Rpic12D_3177 NC_012856.1 3360909 3361838 D PFAM: fatty acid hydroxylase; KEGG: cti:RALTA_B2063 hypothetical protein; fatty acid hydroxylase 3360909..3361838 Ralstonia pickettii 12D 8020861 YP_002983117.1 CDS Rpic12D_3178 NC_012856.1 3361840 3362721 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RSc3308 transcription regulator protein; LysR family transcriptional regulator complement(3361840..3362721) Ralstonia pickettii 12D 8020862 YP_002983118.1 CDS Rpic12D_3179 NC_012856.1 3362821 3363450 D PFAM: Glutathione S-transferase domain; KEGG: rso:RSc3309 glutathione S-transferase protein; glutathione S-transferase 3362821..3363450 Ralstonia pickettii 12D 8020863 YP_002983119.1 CDS Rpic12D_3180 NC_012856.1 3363643 3364704 D TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: rso:RSc3310 phosphate ABC transporter phosphate-binding protein; phosphate ABC transporter substrate-binding protein 3363643..3364704 Ralstonia pickettii 12D 8020864 YP_002983120.1 CDS Rpic12D_3181 NC_012856.1 3364876 3365079 D KEGG: rso:RSc3311 hypothetical protein; hypothetical protein 3364876..3365079 Ralstonia pickettii 12D 8020865 YP_002983121.1 CDS Rpic12D_3182 NC_012856.1 3365093 3366040 R PFAM: alpha/beta hydrolase fold-3 domain protein; KEGG: rso:RSc3312 lipase protein; alpha/beta hydrolase complement(3365093..3366040) Ralstonia pickettii 12D 8020866 YP_002983122.1 CDS Rpic12D_3183 NC_012856.1 3366171 3366632 R PFAM: CoA-binding domain protein; KEGG: rso:RSc3313 hypothetical protein; CoA-binding domain-containing protein complement(3366171..3366632) Ralstonia pickettii 12D 8020867 YP_002983123.1 CDS Rpic12D_3184 NC_012856.1 3366653 3367795 R KEGG: rso:RSc3314 hypothetical protein; hypothetical protein complement(3366653..3367795) Ralstonia pickettii 12D 8020868 YP_002983124.1 CDS Rpic12D_3185 NC_012856.1 3368405 3370804 D KEGG: rso:RSc3315 prolin-rich transmembrane protein; prolin-rich transmembrane protein 3368405..3370804 Ralstonia pickettii 12D 8020869 YP_002983125.1 CDS atpC NC_012856.1 3370903 3371319 R part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon complement(3370903..3371319) Ralstonia pickettii 12D 8020870 YP_002983126.1 CDS Rpic12D_3187 NC_012856.1 3371411 3372820 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta complement(3371411..3372820) Ralstonia pickettii 12D 8020871 YP_002983127.1 CDS Rpic12D_3188 NC_012856.1 3372857 3373732 R Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma complement(3372857..3373732) Ralstonia pickettii 12D 8020872 YP_002983128.1 CDS Rpic12D_3189 NC_012856.1 3373809 3375350 R produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha complement(3373809..3375350) Ralstonia pickettii 12D 8020873 YP_002983129.1 CDS Rpic12D_3190 NC_012856.1 3375436 3375972 R Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta complement(3375436..3375972) Ralstonia pickettii 12D 8020874 YP_002983130.1 CDS Rpic12D_3191 NC_012856.1 3375975 3376445 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B complement(3375975..3376445) Ralstonia pickettii 12D 8020875 YP_002983131.1 CDS Rpic12D_3192 NC_012856.1 3376552 3376818 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C complement(3376552..3376818) Ralstonia pickettii 12D 8020876 YP_002983132.1 CDS Rpic12D_3193 NC_012856.1 3376902 3377783 R Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A complement(3376902..3377783) Ralstonia pickettii 12D 8020877 YP_002983133.1 CDS Rpic12D_3194 NC_012856.1 3378014 3378562 R PFAM: ATP synthase I chain; KEGG: rso:RSc3324 hypothetical protein; ATP synthase subunit I complement(3378014..3378562) Ralstonia pickettii 12D 8020878 YP_002983134.1 CDS Rpic12D_3195 NC_012856.1 3378912 3379823 R KEGG: rso:RSc3325 chromosome partitioning protein ParB; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; parB-like partition protein complement(3378912..3379823) Ralstonia pickettii 12D 8020879 YP_002983135.1 CDS Rpic12D_3196 NC_012856.1 3379841 3380626 R PFAM: cobyrinic acid ac-diamide synthase; KEGG: rso:RSc3326 chromosome partitioning protein ParA; cobyrinic acid ac-diamide synthase complement(3379841..3380626) Ralstonia pickettii 12D 8020880 YP_002983136.1 CDS gidB NC_012856.1 3380664 3381332 R glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB complement(3380664..3381332) Ralstonia pickettii 12D 8020881 YP_002983137.1 CDS Rpic12D_3198 NC_012856.1 3381332 3383281 R GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA complement(3381332..3383281) Ralstonia pickettii 12D 8020882 YP_002983138.1 CDS Rpic12D_3199 NC_012856.1 3383765 3384913 R PFAM: extracellular ligand-binding receptor; KEGG: rso:RSc3329 amino-acid-binding periplasmic (PBP) ABC transporter protein; extracellular ligand-binding receptor complement(3383765..3384913) Ralstonia pickettii 12D 8020883 YP_002983139.1 CDS Rpic12D_3200 NC_012856.1 3385070 3385723 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rso:RSc3331 short chain dehydrogenase; short chain dehydrogenase complement(3385070..3385723) Ralstonia pickettii 12D 8020884 YP_002983140.1 CDS Rpic12D_3201 NC_012856.1 3385966 3386181 D KEGG: rso:RSc3333 hypothetical protein; hypothetical protein 3385966..3386181 Ralstonia pickettii 12D 8020885 YP_002983141.1 CDS Rpic12D_3202 NC_012856.1 3386194 3387090 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RSc3334 transcription regulator protein; LysR family transcriptional regulator complement(3386194..3387090) Ralstonia pickettii 12D 8020886 YP_002983142.1 CDS Rpic12D_3203 NC_012856.1 3387197 3388153 D PFAM: NAD-dependent epimerase/dehydratase; NmrA family protein; dTDP-4-dehydrorhamnose reductase; KEGG: rso:RSc3335 hypothetical protein; NAD-dependent epimerase/dehydratase 3387197..3388153 Ralstonia pickettii 12D 8020887 YP_002983143.1 CDS Rpic12D_3204 NC_012856.1 3388139 3388690 R TIGRFAM: phosphonate degradation operons associated HDIG domain protein; SMART: metal-dependent phosphohydrolase HD region; KEGG: bma:BMAA0861 hypothetical protein; metal dependent phosphohydrolase complement(3388139..3388690) Ralstonia pickettii 12D 8020888 YP_002983144.1 CDS Rpic12D_3205 NC_012856.1 3388859 3389236 D PFAM: cupin; KEGG: bps:BPSS1690 hypothetical protein; cupin 3388859..3389236 Ralstonia pickettii 12D 8020889 YP_002983145.1 CDS Rpic12D_3206 NC_012856.1 3389226 3389984 R PFAM: protein of unknown function DUF81; KEGG: rso:RSc3337 hypothetical protein; hypothetical protein complement(3389226..3389984) Ralstonia pickettii 12D 8020890 YP_002983146.1 CDS Rpic12D_3207 NC_012856.1 3390008 3390487 R KEGG: rso:RSc3338 hypothetical protein; hypothetical protein complement(3390008..3390487) Ralstonia pickettii 12D 8020891 YP_002983147.1 CDS Rpic12D_3208 NC_012856.1 3390564 3390788 D KEGG: rso:RSc3339 hypothetical protein; hypothetical protein 3390564..3390788 Ralstonia pickettii 12D 8020892 YP_002983148.1 CDS Rpic12D_3209 NC_012856.1 3391035 3392039 R PFAM: inner-membrane translocator; KEGG: rso:RSc3340 transmembrane ABC transporter protein; inner-membrane translocator complement(3391035..3392039) Ralstonia pickettii 12D 8020893 YP_002983149.1 CDS Rpic12D_3210 NC_012856.1 3392036 3392920 R PFAM: inner-membrane translocator; KEGG: rso:RSc3341 transmembrane ABC transporter protein; inner-membrane translocator complement(3392036..3392920) Ralstonia pickettii 12D 8020894 YP_002983150.1 CDS Rpic12D_3211 NC_012856.1 3393002 3394210 R PFAM: extracellular ligand-binding receptor; KEGG: rso:RSc3342 substrate-binding periplasmic (PBP) ABC transporter protein; extracellular ligand-binding receptor complement(3393002..3394210) Ralstonia pickettii 12D 8020895 YP_002983151.1 CDS Rpic12D_3212 NC_012856.1 3394286 3395026 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RSc3343 ABC transporter ATP-binding protein; ABC transporter complement(3394286..3395026) Ralstonia pickettii 12D 8020896 YP_002983152.1 CDS Rpic12D_3213 NC_012856.1 3395121 3395891 R PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RSc3344 ABC transporter ATP-binding protein; ABC transporter complement(3395121..3395891) Ralstonia pickettii 12D 8020897 YP_002983153.1 CDS Rpic12D_3214 NC_012856.1 3396136 3397770 R PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: rso:RSc3345 choline dehydrogenase lipoprotein oxidoreductase; glucose-methanol-choline oxidoreductase complement(3396136..3397770) Ralstonia pickettii 12D 8020898 YP_002983154.1 CDS Rpic12D_3215 NC_012856.1 3397838 3398707 R PFAM: alpha/beta hydrolase fold; KEGG: rso:RSc3346 lysophospholipase protein; alpha/beta hydrolase fold protein complement(3397838..3398707) Ralstonia pickettii 12D 8020899 YP_002983155.1 CDS Rpic12D_3216 NC_012856.1 3398783 3399250 R KEGG: rso:RSc3347 transcription regulator protein; TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR; MerR family transcriptional regulator complement(3398783..3399250) Ralstonia pickettii 12D 8020900 YP_002983156.1 CDS Rpic12D_3217 NC_012856.1 3399247 3401472 R TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: rso:RSc3348 cation-transporting ATPase transmembrane protein; heavy metal translocating P-type ATPase complement(3399247..3401472) Ralstonia pickettii 12D 8020901 YP_002983157.1 CDS Rpic12D_3218 NC_012856.1 3401615 3401827 D PFAM: heavy metal transport/detoxification protein; KEGG: rso:RSc3349 hypothetical protein; heavy metal transport/detoxification protein 3401615..3401827 Ralstonia pickettii 12D 8020902 YP_002983158.1 CDS Rpic12D_3220 NC_012856.1 3402698 3403096 R KEGG: pol:Bpro_1225 ISPsy11, transposase OrfA; ISPsy11, transposase OrfA complement(3402698..3403096) Ralstonia pickettii 12D 8020904 YP_002983159.1 CDS Rpic12D_3221 NC_012856.1 3403209 3403928 R PFAM: OmpW family protein; KEGG: rso:RSc3350 outer membrane W signal peptide protein; OmpW family protein complement(3403209..3403928) Ralstonia pickettii 12D 8020905 YP_002983160.1 CDS Rpic12D_3222 NC_012856.1 3404133 3405134 R catalyzes the formation of L-proline from L-ornithine; ornithine cyclodeaminase complement(3404133..3405134) Ralstonia pickettii 12D 8020906 YP_002983161.1 CDS Rpic12D_3223 NC_012856.1 3405169 3405933 R PFAM: YhhN family protein; KEGG: rso:RSc3353 hypothetical protein; hypothetical protein complement(3405169..3405933) Ralstonia pickettii 12D 8020907 YP_002983162.1 CDS Rpic12D_3224 NC_012856.1 3406027 3406503 R PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: rso:RSc3354 transcription regulator protein; AsnC family transcriptional regulator complement(3406027..3406503) Ralstonia pickettii 12D 8020908 YP_002983163.1 CDS phhA NC_012856.1 3406642 3407586 D phenylalanine 4-hydroxylase; phenylalanine 4-hydroxylase; catalyzes the formation of 4a-hydroxytetrahydrobiopterin and tyrosine from phenylalanine and tetrahydrobiopterin; phenylalanine 4-monooxygenase 3406642..3407586 Ralstonia pickettii 12D 8020909 YP_002983164.1 CDS phhB NC_012856.1 3407647 3407946 D 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; pterin-4-alpha-carbinolamine dehydratase 3407647..3407946 Ralstonia pickettii 12D 8020910 YP_002983165.1 CDS Rpic12D_3227 NC_012856.1 3407965 3408192 R KEGG: rso:RSc3357 hypothetical protein; hypothetical protein complement(3407965..3408192) Ralstonia pickettii 12D 8020911 YP_002983166.1 CDS Rpic12D_3228 NC_012856.1 3408268 3408978 D PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: cti:RALTA_A3136 response regulator, CheY family; winged helix family two component transcriptional regulator 3408268..3408978 Ralstonia pickettii 12D 8020912 YP_002983167.1 CDS Rpic12D_3229 NC_012856.1 3408988 3410661 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: cti:RALTA_A3138 sensor hybrid histidine kinase; histidine kinase 3408988..3410661 Ralstonia pickettii 12D 8020913 YP_002983168.1 CDS Rpic12D_3230 NC_012856.1 3410678 3411217 R PFAM: nuclear protein SET; SMART: nuclear protein SET; KEGG: rso:RSc3358 hypothetical protein; nuclear protein SET complement(3410678..3411217) Ralstonia pickettii 12D 8020914 YP_002983169.1 CDS Rpic12D_3231 NC_012856.1 3411852 3412130 D PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: rso:RSc3359 histone-like DNA-binding protein HU-beta (NS1); histone family protein DNA-binding protein 3411852..3412130 Ralstonia pickettii 12D 8020915 YP_002983170.1 CDS Rpic12D_3232 NC_012856.1 3412276 3413223 D KEGG: rso:RSc3360 hypothetical protein; hypothetical protein 3412276..3413223 Ralstonia pickettii 12D 8020916 YP_002983171.1 CDS Rpic12D_3233 NC_012856.1 3413336 3414160 D PFAM: class II aldolase/adducin family protein; KEGG: bxe:Bxe_B1223 hypothetical protein; aldolase II superfamily protein 3413336..3414160 Ralstonia pickettii 12D 8020917 YP_002983172.1 CDS Rpic12D_3234 NC_012856.1 3414165 3415142 D ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase 3414165..3415142 Ralstonia pickettii 12D 8020918 YP_002983173.1 CDS Rpic12D_3235 NC_012856.1 3415156 3415959 R PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; KEGG: rso:RSc3362 hypothetical protein; Sel1 domain-containing protein repeat-containing protein complement(3415156..3415959) Ralstonia pickettii 12D 8020919 YP_002983174.1 CDS Rpic12D_3236 NC_012856.1 3415973 3418027 R PFAM: 5'-nucleotidase; metallophosphoesterase; KEGG: rso:RSc3363 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor transmembrane protein; 5'-nucleotidase complement(3415973..3418027) Ralstonia pickettii 12D 8020920 YP_002983175.1 CDS Rpic12D_3237 NC_012856.1 3418377 3419180 D blocks the formation of polar Z-ring septums; septum formation inhibitor 3418377..3419180 Ralstonia pickettii 12D 8020921 YP_002983176.1 CDS Rpic12D_3238 NC_012856.1 3419225 3420043 D TIGRFAM: septum site-determining protein MinD; PFAM: cobyrinic acid ac-diamide synthase; KEGG: rso:RSc3365 septum site-determining protein MinD; septum site-determining protein MinD 3419225..3420043 Ralstonia pickettii 12D 8020922 YP_002983177.1 CDS Rpic12D_3239 NC_012856.1 3420058 3420312 D works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE 3420058..3420312 Ralstonia pickettii 12D 8020923 YP_002983178.1 CDS Rpic12D_3240 NC_012856.1 3420328 3421560 R TIGRFAM: DNA binding domain protein, excisionase family; PFAM: citrate synthase; regulatory protein MerR; KEGG: dac:Daci_4908 citrate synthase; excisionase family DNA binding domain-containing protein complement(3420328..3421560) Ralstonia pickettii 12D 8020924 YP_002983179.1 CDS Rpic12D_3241 NC_012856.1 3421668 3423101 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rso:RSc3367 hypothetical protein; L-carnitine dehydratase/bile acid-inducible protein F 3421668..3423101 Ralstonia pickettii 12D 8020925 YP_002983180.1 CDS Rpic12D_3242 NC_012856.1 3423162 3424019 D PFAM: protein of unknown function DUF519; KEGG: rso:RSc3368 hypothetical protein; hypothetical protein 3423162..3424019 Ralstonia pickettii 12D 8020926 YP_002983181.1 CDS Rpic12D_3243 NC_012856.1 3424168 3425070 D PFAM: protein of unknown function DUF344; KEGG: bph:Bphy_3855 hypothetical protein; hypothetical protein 3424168..3425070 Ralstonia pickettii 12D 8020927 YP_002983182.1 CDS Rpic12D_3244 NC_012856.1 3425152 3426738 R PFAM: phosphate transporter; KEGG: bur:Bcep18194_B0357 phosphate transporter; phosphate transporter complement(3425152..3426738) Ralstonia pickettii 12D 8020928 YP_002983183.1 CDS Rpic12D_3245 NC_012856.1 3426841 3427128 R PFAM: acylphosphatase; KEGG: rso:RSc3370 hypothetical protein; acylphosphatase complement(3426841..3427128) Ralstonia pickettii 12D 8020929 YP_002983184.1 CDS Rpic12D_3246 NC_012856.1 3427417 3429201 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rso:RSc3371 transmembrane ABC transporter protein; binding-protein-dependent transport system inner membrane protein 3427417..3429201 Ralstonia pickettii 12D 8020930 YP_002983185.1 CDS Rpic12D_3247 NC_012856.1 3429231 3430604 D PFAM: ABC transporter; SMART: AAA ATPase; KEGG: rso:RSc3372 ABC transporter ATP-binding protein; ABC transporter 3429231..3430604 Ralstonia pickettii 12D 8020931 YP_002983186.1 CDS algL NC_012856.1 3430796 3431758 D Depolymerizes alginate by cleaving the beta-1,4 glycosidic bond: may enhance the production of alginate by controlling the length of the polymer chain during export; poly(beta-D-mannuronate) lyase 3430796..3431758 Ralstonia pickettii 12D 8020932 YP_002983187.1 CDS Rpic12D_3249 NC_012856.1 3431836 3432885 D PFAM: dienelactone hydrolase; KEGG: reu:Reut_B5814 hypothetical protein; dienelactone hydrolase 3431836..3432885 Ralstonia pickettii 12D 8020933 YP_002983188.1 CDS Rpic12D_3250 NC_012856.1 3432940 3433902 D KEGG: rme:Rmet_3866 chromate resistance signal peptide protein; chromate resistance signal peptide protein 3432940..3433902 Ralstonia pickettii 12D 8020934 YP_002983189.1 CDS Rpic12D_3251 NC_012856.1 3433929 3435101 D TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: chromate transporter; KEGG: reu:Reut_A1521 chromate transporter; chromate transporter 3433929..3435101 Ralstonia pickettii 12D 8020935 YP_002983190.1 CDS Rpic12D_3252 NC_012856.1 3435124 3435429 R KEGG: rso:RSc3375 hypothetical protein; hypothetical protein complement(3435124..3435429) Ralstonia pickettii 12D 8020936 YP_002983191.1 CDS Rpic12D_3253 NC_012856.1 3435681 3436142 D PFAM: protein of unknown function DUF1311; KEGG: ccr:CC_2991 hypothetical protein; hypothetical protein 3435681..3436142 Ralstonia pickettii 12D 8020937 YP_002983192.1 CDS Rpic12D_3254 NC_012856.1 3436563 3436883 D SMART: regulatory protein ArsR; KEGG: rso:RSp1129 arsenical resistance operon repressor transcription regulator protein; putative ArsR family transcriptional regulator 3436563..3436883 Ralstonia pickettii 12D 8020938 YP_002983193.1 CDS Rpic12D_3255 NC_012856.1 3436877 3437395 D PFAM: protein-tyrosine phosphatase, low molecular weight; SMART: protein-tyrosine phosphatase, low molecular weight; KEGG: rso:RSp1128 arsenate reductase (arsenical PUMP modifier) protein; protein-tyrosine phosphatase, low molecular weight 3436877..3437395 Ralstonia pickettii 12D 8020939 YP_002983194.1 CDS Rpic12D_3256 NC_012856.1 3437401 3438108 D PFAM: major intrinsic protein; KEGG: rso:RS05492 transmembrane ABC transporter protein; major intrinsic protein 3437401..3438108 Ralstonia pickettii 12D 8020940 YP_002983195.1 CDS Rpic12D_3257 NC_012856.1 3438274 3439182 D PFAM: alpha/beta hydrolase fold; KEGG: rme:Rmet_1760 alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 3438274..3439182 Ralstonia pickettii 12D 8020941 YP_002983196.1 CDS Rpic12D_3258 NC_012856.1 3439235 3439564 D KEGG: mlo:mll4534 hypothetical protein; hypothetical protein 3439235..3439564 Ralstonia pickettii 12D 8020942 YP_002983197.1 CDS Rpic12D_3259 NC_012856.1 3439620 3439988 R KEGG: rso:RSc3434 hypothetical protein; hypothetical protein complement(3439620..3439988) Ralstonia pickettii 12D 8020943 YP_002983198.1 CDS Rpic12D_3260 NC_012856.1 3440567 3440926 D KEGG: pfl:PFL_5498 cytoplasmic protein; hypothetical protein 3440567..3440926 Ralstonia pickettii 12D 8020944 YP_002983199.1 CDS Rpic12D_3261 NC_012856.1 3440936 3441391 D KEGG: bpy:Bphyt_0466 periplasmic protein; hypothetical protein 3440936..3441391 Ralstonia pickettii 12D 8020945 YP_002983200.1 CDS Rpic12D_3262 NC_012856.1 3441479 3443452 R PFAM: amino acid permease-associated region; KEGG: bur:Bcep18194_B2571 amino acid transporter-like; amino acid permease-associated protein complement(3441479..3443452) Ralstonia pickettii 12D 8020946 YP_002983201.1 CDS Rpic12D_3263 NC_012856.1 3443747 3443908 D hypothetical protein 3443747..3443908 Ralstonia pickettii 12D 8020947 YP_002983202.1 CDS Rpic12D_3264 NC_012856.1 3444158 3444583 D PFAM: UspA domain protein; KEGG: rme:Rmet_5647 UspA; UspA domain-containing protein 3444158..3444583 Ralstonia pickettii 12D 8020948 YP_002983203.1 CDS Rpic12D_3265 NC_012856.1 3445038 3445844 D KEGG: rso:RSc3379 transmembrane protein; hypothetical protein 3445038..3445844 Ralstonia pickettii 12D 8020949 YP_002983204.1 CDS Rpic12D_3266 NC_012856.1 3445876 3446001 D KEGG: rso:RSc3380 signal peptide protein; signal peptide protein 3445876..3446001 Ralstonia pickettii 12D 8020950 YP_002983205.1 CDS Rpic12D_3267 NC_012856.1 3446107 3447879 D catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase A 3446107..3447879 Ralstonia pickettii 12D 8020951 YP_002983206.1 CDS Rpic12D_3268 NC_012856.1 3447920 3450145 D One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase B 3447920..3450145 Ralstonia pickettii 12D 8020952 YP_002983207.1 CDS Rpic12D_3269 NC_012856.1 3450161 3450784 D One of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex; potassium-transporting ATPase C 3450161..3450784 Ralstonia pickettii 12D 8020953 YP_002983208.1 CDS Rpic12D_3270 NC_012856.1 3450941 3453757 D PFAM: osmosensitive K channel His kinase sensor; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rso:RSc3385 two-component sensor kinase KdpD transcription regulator protein; osmosensitive K channel His kinase sensor 3450941..3453757 Ralstonia pickettii 12D 8020954 YP_002983209.1 CDS Rpic12D_3271 NC_012856.1 3453895 3454701 D TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: rso:RSc3386 outermembrane signal peptide protein; lipoprotein 3453895..3454701 Ralstonia pickettii 12D 8020955 YP_002983210.1 CDS Rpic12D_3272 NC_012856.1 3455643 3456857 D PFAM: EAL domain protein; response regulator receiver; SMART: EAL domain protein; response regulator receiver; KEGG: rso:RSc3387 two-component response regulator transcription regulator protein; response regulator receiver modulated diguanylate phosphodiesterase 3455643..3456857 Ralstonia pickettii 12D 8020956 YP_002983211.1 CDS Rpic12D_3273 NC_012856.1 3457100 3457747 D PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver; KEGG: rso:RSc3388 two-component response regulator transcription regulator protein; two component LuxR family transcriptional regulator 3457100..3457747 Ralstonia pickettii 12D 8020957 YP_002983212.1 CDS Rpic12D_3274 NC_012856.1 3457758 3458498 R PFAM: major intrinsic protein; KEGG: reh:H16_A3690 glycerol uptake facilitator or related permease; major intrinsic protein complement(3457758..3458498) Ralstonia pickettii 12D 8020958 YP_002983213.1 CDS Rpic12D_3275 NC_012856.1 3458672 3460075 R PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr0898 ATP-binding protein; major facilitator superfamily protein complement(3458672..3460075) Ralstonia pickettii 12D 8020959 YP_002983214.1 CDS Rpic12D_3276 NC_012856.1 3460263 3461108 D SMART: helix-turn-helix domain protein; KEGG: bcm:Bcenmc03_4092 XRE family transcriptional regulator; XRE family transcriptional regulator 3460263..3461108 Ralstonia pickettii 12D 8020960 YP_002983215.1 CDS Rpic12D_3277 NC_012856.1 3461113 3461712 R PFAM: isochorismatase hydrolase; KEGG: yen:YE2398 hypothetical protein; hypothetical protein complement(3461113..3461712) Ralstonia pickettii 12D 8020961 YP_002983216.1 CDS Rpic12D_3278 NC_012856.1 3461735 3462169 R PFAM: thioesterase superfamily protein; KEGG: bam:Bamb_1483 hypothetical protein; thioesterase superfamily protein complement(3461735..3462169) Ralstonia pickettii 12D 8020962 YP_002983217.1 CDS Rpic12D_3279 NC_012856.1 3462464 3463591 D PFAM: porin Gram-negative type; KEGG: rso:RSc3390 porin signal peptide protein; porin 3462464..3463591 Ralstonia pickettii 12D 8020963 YP_002983218.1 CDS Rpic12D_3280 NC_012856.1 3463610 3464659 R KEGG: rso:RSc3391 signal peptide protein; signal peptide protein complement(3463610..3464659) Ralstonia pickettii 12D 8020964 YP_002983219.1 CDS Rpic12D_3281 NC_012856.1 3464807 3465487 D PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: rso:RSc3392 response regulator transcription regulator protein; winged helix family two component transcriptional regulator 3464807..3465487 Ralstonia pickettii 12D 8020965 YP_002983220.1 CDS Rpic12D_3282 NC_012856.1 3465465 3466916 D KEGG: bxe:Bxe_B0497 histidine kinase; PFAM: ATP-binding region ATPase domain protein; Two-component sensor kinase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase 3465465..3466916 Ralstonia pickettii 12D 8020966 YP_002983221.1 CDS Rpic12D_3283 NC_012856.1 3466947 3467078 R KEGG: shw:Sputw3181_3921 hypothetical protein; hypothetical protein complement(3466947..3467078) Ralstonia pickettii 12D 8020967 YP_002983222.1 CDS Rpic12D_3284 NC_012856.1 3467141 3467680 R KEGG: bpt:Bpet1645 secreted protein; hypothetical protein complement(3467141..3467680) Ralstonia pickettii 12D 8020968 YP_002983223.1 CDS Rpic12D_3285 NC_012856.1 3467707 3468084 R KEGG: bac:BamMC406_6385 hypothetical protein; hypothetical protein complement(3467707..3468084) Ralstonia pickettii 12D 8020969 YP_002983224.1 CDS Rpic12D_3286 NC_012856.1 3468267 3468746 R TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: rso:RSc3397 hypothetical protein; BadM/Rrf2 family transcriptional regulator complement(3468267..3468746) Ralstonia pickettii 12D 8020970 YP_002983225.1 CDS Rpic12D_3287 NC_012856.1 3468977 3470182 D PFAM: oxidoreductase FAD-binding protein; oxidoreductase FAD/NAD(P)-binding domain protein; globin; KEGG: rso:RSc3398 flavohemoprotein (hemoglobin-like) transmembrane; oxidoreductase FAD-binding domain-containing protein 3468977..3470182 Ralstonia pickettii 12D 8020971 YP_002983226.1 CDS Rpic12D_3288 NC_012856.1 3470203 3471417 D PFAM: NnrS family protein; KEGG: rso:RSc3399 hypothetical protein; NnrS family protein 3470203..3471417 Ralstonia pickettii 12D 8020972 YP_002983227.1 CDS Rpic12D_3289 NC_012856.1 3471490 3472947 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: reu:Reut_A1805 GntR family transcriptional regulator; GntR family transcriptional regulator 3471490..3472947 Ralstonia pickettii 12D 8020973 YP_002983228.1 CDS Rpic12D_3290 NC_012856.1 3473026 3473463 D TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase; KEGG: rme:Rmet_4317 alkylhydroperoxidase AhpD core; alkylhydroperoxidase 3473026..3473463 Ralstonia pickettii 12D 8020974 YP_002983229.1 CDS Rpic12D_3291 NC_012856.1 3473512 3473943 D KEGG: ank:AnaeK_1617 hypothetical protein; hypothetical protein 3473512..3473943 Ralstonia pickettii 12D 8020975 YP_002983230.1 CDS Rpic12D_3292 NC_012856.1 3473948 3475267 R PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: rso:RSc3400 tranporter transmembrane protein; major facilitator superfamily protein complement(3473948..3475267) Ralstonia pickettii 12D 8020976 YP_002983231.1 CDS Rpic12D_3293 NC_012856.1 3475436 3476320 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: reu:Reut_B4604 LysR family transcriptional regulator; LysR family transcriptional regulator complement(3475436..3476320) Ralstonia pickettii 12D 8020977 YP_002983232.1 CDS Rpic12D_3294 NC_012856.1 3476434 3477366 D catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; N-acetyl-gamma-glutamyl-phosphate reductase 3476434..3477366 Ralstonia pickettii 12D 8020978 YP_002983233.1 CDS Rpic12D_3295 NC_012856.1 3477505 3478341 D TIGRFAM: allantoin catabolism protein; PFAM: protein of unknown function DUF861 cupin_3; cupin; KEGG: bmu:Bmul_3330 hypothetical protein; hypothetical protein 3477505..3478341 Ralstonia pickettii 12D 8020979 YP_002983234.1 CDS Rpic12D_3298 NC_012856.1 3479334 3479642 R KEGG: rso:RSc0320 hypothetical protein; hypothetical protein complement(3479334..3479642) Ralstonia pickettii 12D 8020982 YP_002983235.1 CDS Rpic12D_3299 NC_012856.1 3479961 3480233 D PFAM: protein of unknown function DUF156; KEGG: rso:RS03926 hypothetical protein; hypothetical protein 3479961..3480233 Ralstonia pickettii 12D 8020983 YP_002983236.1 CDS Rpic12D_3300 NC_012856.1 3480592 3481455 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: bte:BTH_I0180 hypothetical protein; hypothetical protein 3480592..3481455 Ralstonia pickettii 12D 8020984 YP_002983237.1 CDS Rpic12D_3301 NC_012856.1 3481479 3482798 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rso:RSc3403 two-component sensor kinase transcription regulator protein; histidine kinase complement(3481479..3482798) Ralstonia pickettii 12D 8020985 YP_002983238.1 CDS Rpic12D_3302 NC_012856.1 3482795 3483460 R PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: rso:RSc3404 response regulator transcription regulator protein; winged helix family two component transcriptional regulator complement(3482795..3483460) Ralstonia pickettii 12D 8020986 YP_002983239.1 CDS Rpic12D_3303 NC_012856.1 3483608 3483997 R KEGG: cti:RALTA_B1132 conserved hypothetical protein; exported protein; hypothetical protein complement(3483608..3483997) Ralstonia pickettii 12D 8020987 YP_002983240.1 CDS Rpic12D_3304 NC_012856.1 3484104 3484538 R PFAM: UspA domain protein; KEGG: rme:Rmet_0458 UspA; UspA domain-containing protein complement(3484104..3484538) Ralstonia pickettii 12D 8020988 YP_002983241.1 CDS Rpic12D_3305 NC_012856.1 3484723 3485166 D PFAM: thioesterase superfamily protein; KEGG: bid:Bind_3477 thioesterase superfamily protein; thioesterase superfamily protein 3484723..3485166 Ralstonia pickettii 12D 8020989 YP_002983242.1 CDS Rpic12D_3306 NC_012856.1 3485276 3485497 D KEGG: rso:RSc0126 hypothetical protein; hypothetical protein 3485276..3485497 Ralstonia pickettii 12D 8020990 YP_002983243.1 CDS Rpic12D_3307 NC_012856.1 3485510 3486217 R hypothetical protein complement(3485510..3486217) Ralstonia pickettii 12D 8020991 YP_002983244.1 CDS Rpic12D_3308 NC_012856.1 3486214 3486870 R KEGG: bpy:Bphyt_3016 hypothetical protein; hypothetical protein complement(3486214..3486870) Ralstonia pickettii 12D 8020992 YP_002983245.1 CDS Rpic12D_3309 NC_012856.1 3486867 3487442 R KEGG: bps:BPSL0554 hypothetical protein; hypothetical protein complement(3486867..3487442) Ralstonia pickettii 12D 8020993 YP_002983246.1 CDS Rpic12D_3310 NC_012856.1 3487900 3488184 D KEGG: rso:RSc3434 hypothetical protein; hypothetical protein 3487900..3488184 Ralstonia pickettii 12D 8020994 YP_002983247.1 CDS Rpic12D_3311 NC_012856.1 3488218 3488958 D KEGG: dge:Dgeo_1780 hypothetical protein; hypothetical protein 3488218..3488958 Ralstonia pickettii 12D 8020995 YP_002983248.1 CDS Rpic12D_3312 NC_012856.1 3488973 3489857 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mlo:mll2505 transcriptional regulator; LysR family transcriptional regulator complement(3488973..3489857) Ralstonia pickettii 12D 8020996 YP_002983249.1 CDS Rpic12D_3313 NC_012856.1 3490211 3491941 D PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: rso:RSc0123 alcohol dehydrogenase oxidoreductase protein; glucose-methanol-choline oxidoreductase 3490211..3491941 Ralstonia pickettii 12D 8020997 YP_002983250.1 CDS Rpic12D_3314 NC_012856.1 3492249 3493157 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: rso:RSc0122 substrate-binding periplasmic (PBP) ABC transporter protein; family 3 extracellular solute-binding protein complement(3492249..3493157) Ralstonia pickettii 12D 8020998 YP_002983251.1 CDS Rpic12D_3315 NC_012856.1 3493367 3494263 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: rso:RSc0973 amino-acid-binding periplasmic (PBP) ABC transporter protein; family 3 extracellular solute-binding protein complement(3493367..3494263) Ralstonia pickettii 12D 8020999 YP_002983252.1 CDS Rpic12D_3316 NC_012856.1 3494388 3496049 R PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rso:RSc0121 oxidoreductase flavoprotein FAD; acyl-CoA dehydrogenase domain-containing protein complement(3494388..3496049) Ralstonia pickettii 12D 8021000 YP_002983253.1 CDS Rpic12D_3317 NC_012856.1 3496243 3497391 R PFAM: 2-nitropropane dioxygenase NPD; KEGG: rso:RSc0114 hypothetical protein; 2-nitropropane dioxygenase complement(3496243..3497391) Ralstonia pickettii 12D 8021001 YP_002983254.1 CDS Rpic12D_3318 NC_012856.1 3497808 3499715 D required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 3497808..3499715 Ralstonia pickettii 12D 8021002 YP_002983255.1 CDS Rpic12D_3319 NC_012856.1 3499728 3500873 D PFAM: FAD dependent oxidoreductase; KEGG: rso:RSc0112 D-amino acid oxidase flavoprotein oxidoreductase; FAD dependent oxidoreductase 3499728..3500873 Ralstonia pickettii 12D 8021003 YP_002983256.1 CDS Rpic12D_3320 NC_012856.1 3500870 3501085 D with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate; sulfur carrier protein ThiS 3500870..3501085 Ralstonia pickettii 12D 8021004 YP_002983257.1 CDS thiG NC_012856.1 3501095 3501922 D functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 3501095..3501922 Ralstonia pickettii 12D 8021005 YP_002983258.1 CDS Rpic12D_3322 NC_012856.1 3501919 3503073 D PFAM: thiamine monophosphate synthase; KEGG: rso:RSc0108 thiamine-phosphate pyrophosphorylase protein; thiamine monophosphate synthase 3501919..3503073 Ralstonia pickettii 12D 8021006 YP_002983259.1 CDS Rpic12D_3323 NC_012856.1 3503196 3503675 D PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rso:RSc0107 hypothetical protein; glyoxalase/bleomycin resistance protein/dioxygenase 3503196..3503675 Ralstonia pickettii 12D 8021007 YP_002983260.1 CDS Rpic12D_3324 NC_012856.1 3503899 3506292 D KEGG: reh:H16_A0657 hypothetical protein; hypothetical protein 3503899..3506292 Ralstonia pickettii 12D 8021008 YP_002983261.1 CDS Rpic12D_3325 NC_012856.1 3506302 3507882 D KEGG: reh:H16_A0658 hypothetical protein; hypothetical protein 3506302..3507882 Ralstonia pickettii 12D 8021009 YP_002983262.1 CDS Rpic12D_3326 NC_012856.1 3508065 3509663 D KEGG: reh:H16_A0658 hypothetical protein; hypothetical protein 3508065..3509663 Ralstonia pickettii 12D 8021010 YP_002983263.1 CDS Rpic12D_3327 NC_012856.1 3509682 3510041 R KEGG: rso:RSc0101 lipoprotein transmembrane; lipoprotein transmembrane complement(3509682..3510041) Ralstonia pickettii 12D 8021011 YP_002983264.1 CDS Rpic12D_3328 NC_012856.1 3510056 3510967 R TIGRFAM: phosphomethylpyrimidine kinase; PFAM: phosphomethylpyrimidine kinase type-1; KEGG: rso:RSc0100 bifunctional hydroxy-phosphomethylpyrimidine kinase/hydroxy-methylpyrimidine kinase; phosphomethylpyrimidine kinase complement(3510056..3510967) Ralstonia pickettii 12D 8021012 YP_002983265.1 CDS Rpic12D_3329 NC_012856.1 3511441 3512136 R KEGG: rso:RSc0099 signal peptide protein; signal peptide protein complement(3511441..3512136) Ralstonia pickettii 12D 8021013 YP_002983266.1 CDS Rpic12D_3330 NC_012856.1 3512212 3513606 R KEGG: rso:RSc0098 alkaline phosphatase signal peptide protein; PFAM: alkaline phosphatase; SMART: alkaline phosphatase; alkaline phosphatase complement(3512212..3513606) Ralstonia pickettii 12D 8021014 YP_002983267.1 CDS Rpic12D_3331 NC_012856.1 3513623 3515080 R KEGG: rso:RSc0097 alkaline phosphatase lipoprotein transmembrane; PFAM: alkaline phosphatase; SMART: alkaline phosphatase; alkaline phosphatase complement(3513623..3515080) Ralstonia pickettii 12D 8021015 YP_002983268.1 CDS Rpic12D_3332 NC_012856.1 3515306 3516055 D PFAM: SMC domain protein; SMART: AAA ATPase; KEGG: rme:Rmet_4896 SMC protein-like protein; SMC domain-containing protein 3515306..3516055 Ralstonia pickettii 12D 8021016 YP_002983269.1 CDS Rpic12D_3333 NC_012856.1 3516291 3517715 D catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 3516291..3517715 Ralstonia pickettii 12D 8021017 YP_002983270.1 CDS Rpic12D_3334 NC_012856.1 3517771 3518115 D PFAM: membrane protein of unknown function; KEGG: rso:RSc0092 hypothetical protein; hypothetical protein 3517771..3518115 Ralstonia pickettii 12D 8021018 YP_002983271.1 CDS Rpic12D_3335 NC_012856.1 3518126 3518956 D KEGG: rso:RSc0091 5,10-methylenetetrahydrofolate reductase oxidoreductase protein; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 3518126..3518956 Ralstonia pickettii 12D 8021019 YP_002983272.1 CDS Rpic12D_3336 NC_012856.1 3518987 3519445 D PFAM: TfoX domain protein; KEGG: rso:RSc0090 hypothetical protein; TfoX domain-containing protein 3518987..3519445 Ralstonia pickettii 12D 8021020 YP_002983273.1 CDS Rpic12D_3337 NC_012856.1 3519450 3520064 R PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: pfo:Pfl01_4330 pyridoxamine 5'-phosphate oxidase-like, FMN-binding; pyridoxamine 5'-phosphate oxidase-like protein complement(3519450..3520064) Ralstonia pickettii 12D 8021021 YP_002983274.1 CDS Rpic12D_3338 NC_012856.1 3520082 3520675 R TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: rso:RSc0089 hypothetical protein; 5-formyltetrahydrofolate cyclo-ligase complement(3520082..3520675) Ralstonia pickettii 12D 8021022 YP_002983275.1 CDS Rpic12D_3339 NC_012856.1 3520762 3522714 D PFAM: Lytic transglycosylase catalytic; KEGG: rso:RSc0088 soluble lytic murein transglycosylase precursor transmembrane protein; lytic transglycosylase catalytic subunit 3520762..3522714 Ralstonia pickettii 12D 8021023 YP_002983276.1 CDS Rpic12D_3340 NC_012856.1 3522898 3523902 D PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: rso:RSc0087 NADH-ubiquinone oxidoreductase oxidoreductase protein; NADH dehydrogenase 3522898..3523902 Ralstonia pickettii 12D 8021024 YP_002983277.1 CDS Rpic12D_3341 NC_012856.1 3524127 3524816 D PFAM: Glutathione S-transferase domain; KEGG: rso:RSc0086 hypothetical protein; glutathione S-transferase 3524127..3524816 Ralstonia pickettii 12D 8021025 YP_002983278.1 CDS cca NC_012856.1 3524813 3526099 D catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template; phosphohydrolase activities include hydrolysis of pyrophosphate, 5'-nucleoside tri- and diphosphates, NADP, and 2'-AMP with the production of Pi, metal-dependent phosphodiesterase activity for 2',3'-cAMP, 2',3'-cGMP, and 2',3'-cCMP, and hydrolysis 2',3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides; these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 3524813..3526099 Ralstonia pickettii 12D 8021026 YP_002983279.1 CDS Rpic12D_3343 NC_012856.1 3526130 3527035 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: rso:RSc0084 amino-acid-binding periplasmic (PBP) ABC transporter protein; family 3 extracellular solute-binding protein complement(3526130..3527035) Ralstonia pickettii 12D 8021027 YP_002983280.1 CDS Rpic12D_3344 NC_012856.1 3527119 3527955 R PFAM: protein of unknown function DUF849; KEGG: rso:RSc0083 hypothetical protein; hypothetical protein complement(3527119..3527955) Ralstonia pickettii 12D 8021028 YP_002983281.1 CDS Rpic12D_3345 NC_012856.1 3527949 3529304 R PFAM: aminotransferase class-III; KEGG: rso:RSc0082 hypothetical protein; hypothetical protein complement(3527949..3529304) Ralstonia pickettii 12D 8021029 YP_002983282.1 CDS Rpic12D_3346 NC_012856.1 3529321 3530229 R PFAM: sugar isomerase (SIS); KEGG: rso:RSc0081 hypothetical protein; RpiR family transcriptional regulator complement(3529321..3530229) Ralstonia pickettii 12D 8021030 YP_002983283.1 CDS Rpic12D_3347 NC_012856.1 3530413 3530718 R KEGG: rso:RSc0080 hypothetical protein; hypothetical protein complement(3530413..3530718) Ralstonia pickettii 12D 8021031 YP_002983284.1 CDS Rpic12D_3348 NC_012856.1 3531148 3531861 R PFAM: response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; KEGG: rso:RSc0078 two component response regulator transcription regulator protein; two component Fis family transcriptional regulator complement(3531148..3531861) Ralstonia pickettii 12D 8021033 YP_002983285.1 CDS Rpic12D_3349 NC_012856.1 3531898 3534369 R PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: rso:RSc0077 two component sensor histidine kinase transcription regulator protein; PAS/PAC sensor signal transduction histidine kinase complement(3531898..3534369) Ralstonia pickettii 12D 8021034 YP_002983286.1 CDS Rpic12D_3350 NC_012856.1 3534366 3535136 R KEGG: rso:RSc0076 proline rich signal peptide protein; proline rich signal peptide protein complement(3534366..3535136) Ralstonia pickettii 12D 8021035 YP_002983287.1 CDS Rpic12D_3351 NC_012856.1 3535150 3536481 R TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; KEGG: rso:RSc0075 RNA methyltransferase (SUN protein); sun protein complement(3535150..3536481) Ralstonia pickettii 12D 8021036 YP_002983288.1 CDS Rpic12D_3352 NC_012856.1 3536585 3537445 R PFAM: peptidase M48 Ste24p; KEGG: rso:RSc0074 heat shock protein HtpX; M48 family peptidase complement(3536585..3537445) Ralstonia pickettii 12D 8021037 YP_002983289.1 CDS Rpic12D_3353 NC_012856.1 3537566 3538222 R PFAM: lysine exporter protein (LYSE/YGGA); KEGG: rso:RSc0073 transporter transmembrane protein; Lysine exporter protein LysE/YggA complement(3537566..3538222) Ralstonia pickettii 12D 8021038 YP_002983290.1 CDS fmt NC_012856.1 3538254 3539237 R modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase complement(3538254..3539237) Ralstonia pickettii 12D 8021039 YP_002983291.1 CDS Rpic12D_3355 NC_012856.1 3539294 3541318 R KEGG: rso:RSc0071 hypothetical protein; hypothetical protein complement(3539294..3541318) Ralstonia pickettii 12D 8021040 YP_002983292.1 CDS def NC_012856.1 3541329 3541844 R cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase complement(3541329..3541844) Ralstonia pickettii 12D 8021041 YP_002983293.1 CDS Rpic12D_3357 NC_012856.1 3542190 3543284 D PFAM: peptidoglycan-binding LysM; SMART: peptidoglycan-binding LysM; KEGG: rso:RSc0069 signal peptide protein; peptidoglycan-binding LysM 3542190..3543284 Ralstonia pickettii 12D 8021042 YP_002983294.1 CDS Rpic12D_3358 NC_012856.1 3543310 3544515 D TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: rso:RSc0068 smf protein; DNA protecting protein DprA 3543310..3544515 Ralstonia pickettii 12D 8021043 YP_002983295.1 CDS Rpic12D_3359 NC_012856.1 3544578 3544958 D PFAM: Thioredoxin domain; KEGG: rso:RSc0067 thioredoxin-like protein; thioredoxin domain-containing protein 3544578..3544958 Ralstonia pickettii 12D 8021044 YP_002983296.1 CDS Rpic12D_3360 NC_012856.1 3545212 3547842 D decatenates replicating daughter chromosomes; DNA topoisomerase III 3545212..3547842 Ralstonia pickettii 12D 8021045 YP_002983297.1 CDS Rpic12D_3361 NC_012856.1 3547916 3548854 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RSc0065 transcription regulator protein; LysR family transcriptional regulator complement(3547916..3548854) Ralstonia pickettii 12D 8021046 YP_002983298.1 CDS Rpic12D_3362 NC_012856.1 3549307 3550995 D PFAM: AMP-dependent synthetase and ligase; KEGG: rso:RSc0064 long-chain-fatty-acid--CoA ligase protein; AMP-dependent synthetase and ligase 3549307..3550995 Ralstonia pickettii 12D 8021047 YP_002983299.1 CDS Rpic12D_3363 NC_012856.1 3551034 3552185 R TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: rso:RSc0063 rod shape-determining (RodA protein) transmembrane; rod shape-determining protein RodA complement(3551034..3552185) Ralstonia pickettii 12D 8021048 YP_002983300.1 CDS Rpic12D_3364 NC_012856.1 3552209 3554614 R KEGG: rso:RSc0062 substrate-binding transmembrane protein; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; penicillin-binding protein 2 complement(3552209..3554614) Ralstonia pickettii 12D 8021049 YP_002983301.1 CDS Rpic12D_3365 NC_012856.1 3554657 3555169 R TIGRFAM: rod shape-determining protein MreD; PFAM: Rod shape-determining protein MreD; KEGG: rso:RSc0061 rod shape-determining MreD transmembrane protein; rod shape-determining protein MreD complement(3554657..3555169) Ralstonia pickettii 12D 8021050 YP_002983302.1 CDS Rpic12D_3366 NC_012856.1 3555186 3556232 R in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC complement(3555186..3556232) Ralstonia pickettii 12D 8021051 YP_002983303.1 CDS Rpic12D_3367 NC_012856.1 3556472 3557515 R functions in MreBCD complex in some organisms; rod shape-determining protein MreB complement(3556472..3557515) Ralstonia pickettii 12D 8021052 YP_002983304.1 CDS gatC NC_012856.1 3558018 3558317 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 3558018..3558317 Ralstonia pickettii 12D 8021053 YP_002983305.1 CDS gatA NC_012856.1 3558416 3559903 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 3558416..3559903 Ralstonia pickettii 12D 8021054 YP_002983306.1 CDS Rpic12D_3370 NC_012856.1 3559942 3560424 D KEGG: rso:RSc0056 lipoprotein; lipoprotein 3559942..3560424 Ralstonia pickettii 12D 8021055 YP_002983307.1 CDS Rpic12D_3371 NC_012856.1 3560424 3561386 D PFAM: dienelactone hydrolase; KEGG: rso:RSc0055 signal peptide protein; dienelactone hydrolase 3560424..3561386 Ralstonia pickettii 12D 8021056 YP_002983308.1 CDS gatB NC_012856.1 3561472 3562938 D allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 3561472..3562938 Ralstonia pickettii 12D 8021057 YP_002983309.1 CDS Rpic12D_3373 NC_012856.1 3562953 3563642 D PFAM: protein of unknown function DUF484; KEGG: rso:RSc0053 hypothetical protein; hypothetical protein 3562953..3563642 Ralstonia pickettii 12D 8021058 YP_002983310.1 CDS xerC NC_012856.1 3563657 3564643 D site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 3563657..3564643 Ralstonia pickettii 12D 8021059 YP_002983311.1 CDS Rpic12D_3375 NC_012856.1 3564683 3565876 D SMART: PUA domain containing protein; KEGG: rso:RSc0051 hypothetical protein; PUA domain-containing protein 3564683..3565876 Ralstonia pickettii 12D 8021060 YP_002983312.1 CDS Rpic12D_3376 NC_012856.1 3565925 3566473 D PFAM: membrane-bound metal-dependent hydrolase; KEGG: bpl:BURPS1106A_A1741 hypothetical protein; membrane-bound metal-dependent hydrolase 3565925..3566473 Ralstonia pickettii 12D 8021061 YP_002983313.1 CDS Rpic12D_3377 NC_012856.1 3566605 3568131 D PFAM: berberine; FAD linked oxidase domain protein; KEGG: rso:RSc0050 hypothetical protein; Berberine/berberine domain-containing protein 3566605..3568131 Ralstonia pickettii 12D 8021062 YP_002983314.1 CDS Rpic12D_3378 NC_012856.1 3568144 3569382 D KEGG: rso:RSc0049 hemaggltinin-related protein; putative hemaggltinin-like protein 3568144..3569382 Ralstonia pickettii 12D 8021063 YP_002983315.1 CDS Rpic12D_3379 NC_012856.1 3569479 3570006 D PFAM: ferric-uptake regulator; KEGG: rso:RSc0048 transcription regulator protein; Fur family ferric uptake regulator 3569479..3570006 Ralstonia pickettii 12D 8021064 YP_002983316.1 CDS Rpic12D_3380 NC_012856.1 3569994 3571073 D PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: rso:RSc0047 hypothetical protein; cobalamin synthesis protein P47K 3569994..3571073 Ralstonia pickettii 12D 8021065 YP_002983317.1 CDS Rpic12D_3381 NC_012856.1 3571242 3571913 D TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: rme:Rmet_0126 transcriptional regulators, TraR/DksA family; TraR/DksA family transcriptional regulator 3571242..3571913 Ralstonia pickettii 12D 8021066 YP_002983318.1 CDS Rpic12D_3382 NC_012856.1 3572014 3573321 D PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: rso:RSc0045 hypothetical protein; cobalamin synthesis protein P47K 3572014..3573321 Ralstonia pickettii 12D 8021067 YP_002983319.1 CDS Rpic12D_3383 NC_012856.1 3573423 3575024 D PFAM: extracellular solute-binding protein family 5; KEGG: rso:RSc0044 substrate-binding periplasmic (PBP) ABC transporter protein; family 5 extracellular solute-binding protein 3573423..3575024 Ralstonia pickettii 12D 8021068 YP_002983320.1 CDS Rpic12D_3384 NC_012856.1 3575182 3575718 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 3575182..3575718 Ralstonia pickettii 12D 8021069 YP_002983321.1 CDS hslU NC_012856.1 3575745 3577076 D heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 3575745..3577076 Ralstonia pickettii 12D 8021070 YP_002983322.1 CDS Rpic12D_3386 NC_012856.1 3577304 3577918 D KEGG: cti:RALTA_B0381 hypothetical protein; hypothetical protein 3577304..3577918 Ralstonia pickettii 12D 8021071 YP_002983323.1 CDS Rpic12D_3387 NC_012856.1 3578006 3578209 D PFAM: CsbD family protein; KEGG: reh:H16_B0585 hypothetical protein; CsbD family protein 3578006..3578209 Ralstonia pickettii 12D 8021072 YP_002983324.1 CDS Rpic12D_3388 NC_012856.1 3578250 3578828 R PFAM: response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; KEGG: rso:RSc0040 response regulator transcription regulator protein; two component Fis family transcriptional regulator complement(3578250..3578828) Ralstonia pickettii 12D 8021073 YP_002983325.1 CDS Rpic12D_3389 NC_012856.1 3578877 3580223 R PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: rso:RSc0039 transmembrane sensor histidine kinase transcription regulator protein; histidine kinase complement(3578877..3580223) Ralstonia pickettii 12D 8021074 YP_002983326.1 CDS Rpic12D_3390 NC_012856.1 3580365 3580862 D PFAM: protein of unknown function DUF461; KEGG: rso:RSc0038 transmembrane protein; hypothetical protein 3580365..3580862 Ralstonia pickettii 12D 8021075 YP_002983327.1 CDS Rpic12D_3391 NC_012856.1 3580909 3581136 D KEGG: rso:RSc0037 hypothetical protein; hypothetical protein 3580909..3581136 Ralstonia pickettii 12D 8021076 YP_002983328.1 CDS Rpic12D_3392 NC_012856.1 3581353 3581565 R KEGG: rso:RSc0035 hypothetical protein; transmembrane anti-sigma factor complement(3581353..3581565) Ralstonia pickettii 12D 8021077 YP_002983329.1 CDS Rpic12D_3393 NC_012856.1 3581608 3582201 R Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor complement(3581608..3582201) Ralstonia pickettii 12D 8021078 YP_002983330.1 CDS Rpic12D_3394 NC_012856.1 3582376 3583302 D catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 3582376..3583302 Ralstonia pickettii 12D 8021079 YP_002983331.1 CDS Rpic12D_3395 NC_012856.1 3583302 3584147 D TIGRFAM: pyrimidine 5'-nucleotidase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rso:RSc0032 hypothetical protein; pyrimidine 5'-nucleotidase 3583302..3584147 Ralstonia pickettii 12D 8021080 YP_002983332.1 CDS slmA NC_012856.1 3584193 3584843 D FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly; nucleoid occlusion protein 3584193..3584843 Ralstonia pickettii 12D 8021081 YP_002983333.1 CDS Rpic12D_3397 NC_012856.1 3584905 3586419 R PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: rso:RSc0030 transcription regulator protein; GntR family transcriptional regulator complement(3584905..3586419) Ralstonia pickettii 12D 8021082 YP_002983334.1 CDS Rpic12D_3398 NC_012856.1 3586573 3587853 D TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; KEGG: rso:RSc0029 4-aminobutyrate aminotransferase protein; 4-aminobutyrate aminotransferase 3586573..3587853 Ralstonia pickettii 12D 8021083 YP_002983335.1 CDS Rpic12D_3399 NC_012856.1 3587858 3589360 D TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde Dehydrogenase; KEGG: rso:RSc0028 succinate-semialdehyde dehydrogenase oxidoreductase protein; succinate-semialdehyde dehydrogenase 3587858..3589360 Ralstonia pickettii 12D 8021084 YP_002983336.1 CDS metX NC_012856.1 3589639 3590853 D Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase 3589639..3590853 Ralstonia pickettii 12D 8021085 YP_002983337.1 CDS Rpic12D_3401 NC_012856.1 3590850 3591485 D TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; KEGG: rso:RSc0026 hypothetical protein; methionine biosynthesis protein MetW 3590850..3591485 Ralstonia pickettii 12D 8021086 YP_002983338.1 CDS Rpic12D_3402 NC_012856.1 3591587 3592333 D PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; KEGG: rso:RSc0024 signal peptide protein; Sel1 domain-containing protein repeat-containing protein 3591587..3592333 Ralstonia pickettii 12D 8021087 YP_002983339.1 CDS Rpic12D_3403 NC_012856.1 3592411 3592605 R PFAM: protein of unknown function DUF466; KEGG: rso:RSc0023 hypothetical protein; hypothetical protein complement(3592411..3592605) Ralstonia pickettii 12D 8021088 YP_002983340.1 CDS Rpic12D_3404 NC_012856.1 3592614 3594668 R PFAM: carbon starvation protein CstA; KEGG: rso:RSc0022 carbon starvation A transmembrane protein; carbon starvation protein CstA complement(3592614..3594668) Ralstonia pickettii 12D 8021089 YP_002983341.1 CDS Rpic12D_3405 NC_012856.1 3594869 3596335 D PFAM: Cache type 2 domain protein; histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: rso:RSc0021 transmembrane sensor histidine kinase transcription regulator protein; histidine kinase 3594869..3596335 Ralstonia pickettii 12D 8021090 YP_002983342.1 CDS Rpic12D_3406 NC_012856.1 3596332 3596976 D PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: bpl:BURPS1106A_A3133 LuxR family DNA-binding response regulator; two component LuxR family transcriptional regulator 3596332..3596976 Ralstonia pickettii 12D 8021091 YP_002983343.1 CDS Rpic12D_3407 NC_012856.1 3596973 3597956 R PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; KR domain protein; 3-beta hydroxysteroid dehydrogenase/isomerase; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: rme:Rmet_1840 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase complement(3596973..3597956) Ralstonia pickettii 12D 8021092 YP_002983344.1 CDS Rpic12D_3408 NC_012856.1 3598045 3598806 D PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: reu:Reut_A1428 GntR family transcriptional regulator; GntR family transcriptional regulator 3598045..3598806 Ralstonia pickettii 12D 8021093 YP_002983345.1 CDS Rpic12D_3409 NC_012856.1 3598822 3599733 D PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: vei:Veis_3388 6-phosphogluconate dehydrogenase, NAD-binding; 3-hydroxyisobutyrate dehydrogenase 3598822..3599733 Ralstonia pickettii 12D 8021094 YP_002983346.1 CDS Rpic12D_3410 NC_012856.1 3599730 3601043 D PFAM: type III effector Hrp-dependent outers; KEGG: bam:Bamb_4551 type III effector Hrp-dependent outers; Hrp-dependent type III effector protein 3599730..3601043 Ralstonia pickettii 12D 8021095 YP_002983347.1 CDS Rpic12D_3411 NC_012856.1 3601040 3601684 D PFAM: class II aldolase/adducin family protein; KEGG: bcj:BCAM2397 L-fuculose phosphate aldolase; aldolase 3601040..3601684 Ralstonia pickettii 12D 8021096 YP_002983348.1 CDS Rpic12D_3412 NC_012856.1 3601750 3603075 D PFAM: major facilitator superfamily MFS_1; KEGG: bur:Bcep18194_B0475 major facilitator transporter; major facilitator superfamily protein 3601750..3603075 Ralstonia pickettii 12D 8021097 YP_002983349.1 CDS Rpic12D_3413 NC_012856.1 3603099 3603887 D PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rso:RSc0020 hypothetical protein; hydroxypyruvate isomerase 3603099..3603887 Ralstonia pickettii 12D 8021098 YP_002983350.1 CDS Rpic12D_3414 NC_012856.1 3603961 3604422 R KEGG: rso:RSc0019 hypothetical protein; hypothetical protein complement(3603961..3604422) Ralstonia pickettii 12D 8021099 YP_002983351.1 CDS Rpic12D_3415 NC_012856.1 3604533 3605375 R PFAM: transcriptional regulator domain protein; response regulator receiver; SMART: response regulator receiver; KEGG: rso:RSc0018 response regulator transcription regulator protein; winged helix family two component transcriptional regulator complement(3604533..3605375) Ralstonia pickettii 12D 8021100 YP_002983352.1 CDS Rpic12D_3416 NC_012856.1 3606244 3608112 R catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using GTP; phosphoenolpyruvate carboxykinase complement(3606244..3608112) Ralstonia pickettii 12D 8021101 YP_002983353.1 CDS Rpic12D_3417 NC_012856.1 3608539 3609567 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: rso:RSc0016 D-3-phosphoglycerate dehydrogenase oxidoreductase protein; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 3608539..3609567 Ralstonia pickettii 12D 8021102 YP_002983354.1 CDS Rpic12D_3418 NC_012856.1 3609599 3610489 R PFAM: extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: rso:RSc0015 hypothetical protein; extradiol ring-cleavage dioxygenase class III protein subunit B complement(3609599..3610489) Ralstonia pickettii 12D 8021103 YP_002983355.1 CDS Rpic12D_3419 NC_012856.1 3610591 3612024 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: rso:RSc0014 glutathione reductase oxidoreductase protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(3610591..3612024) Ralstonia pickettii 12D 8021104 YP_002983356.1 CDS Rpic12D_3420 NC_012856.1 3612132 3613025 R PFAM: Patatin; KEGG: rso:RSc0013 hypothetical protein; patatin complement(3612132..3613025) Ralstonia pickettii 12D 8021105 YP_002983357.1 CDS Rpic12D_3421 NC_012856.1 3613022 3613693 R PFAM: Tetracycline transcriptional repressor MAATS-type domain protein; regulatory protein TetR; KEGG: rso:RSc0012 AcrAB operon repressor transcription regulator protein; TetR family transcriptional regulator complement(3613022..3613693) Ralstonia pickettii 12D 8021106 YP_002983358.1 CDS Rpic12D_3422 NC_012856.1 3614125 3615534 D TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rso:RSc0011 acriflavin resistance lipoprotein A precursor; RND family efflux transporter MFP subunit 3614125..3615534 Ralstonia pickettii 12D 8021107 YP_002983359.1 CDS Rpic12D_3423 NC_012856.1 3615550 3618702 D TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: rso:RSc0010 acriflavin resistance transmembrane protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 3615550..3618702 Ralstonia pickettii 12D 8021108 YP_002983360.1 CDS Rpic12D_3424 NC_012856.1 3618705 3620249 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rso:RSc0009 drug efflux lipoprotein; NodT family RND efflux system outer membrane lipoprotein 3618705..3620249 Ralstonia pickettii 12D 8021109 YP_002983361.1 CDS Rpic12D_3425 NC_012856.1 3620283 3621461 R KEGG: pmy:Pmen_2775 DNA topoisomerase; DNA topoisomerase complement(3620283..3621461) Ralstonia pickettii 12D 8021110 YP_002983362.1 CDS rpsU NC_012856.1 3621622 3621834 D a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 3621622..3621834 Ralstonia pickettii 12D 8021111 YP_002983363.1 CDS Rpic12D_3427 NC_012856.1 3622085 3622426 D KEGG: bur:Bcep18194_A5683 hypothetical protein; hypothetical protein 3622085..3622426 Ralstonia pickettii 12D 8021112 YP_002983364.1 CDS Rpic12D_3428 NC_012856.1 3622443 3622766 R SMART: protein-tyrosine phosphatase, low molecular weight; KEGG: rso:RSc0006 hypothetical protein; protein-tyrosine phosphatase, low molecular weight complement(3622443..3622766) Ralstonia pickettii 12D 8021113 YP_002983365.1 CDS Rpic12D_3429 NC_012856.1 3622771 3623160 R PFAM: NUDIX hydrolase; KEGG: stp:Strop_1988 NUDIX hydrolase; NUDIX hydrolase complement(3622771..3623160) Ralstonia pickettii 12D 8021114 YP_002983366.1 CDS Rpic12D_3430 NC_012856.1 3623774 3624547 R hypothetical protein complement(3623774..3624547) Ralstonia pickettii 12D 8021115 YP_002983367.1 CDS Rpic12D_3431 NC_012856.1 3624698 3625438 R KEGG: cvi:CV_0017 hypothetical protein; hypothetical protein complement(3624698..3625438) Ralstonia pickettii 12D 8021116 YP_002983368.1 CDS Rpic12D_3432 NC_012856.1 3625507 3625926 R hypothetical protein complement(3625507..3625926) Ralstonia pickettii 12D 8021117 YP_002983369.1 CDS Rpic12D_3433 NC_012856.1 3626299 3626517 D KEGG: xcb:XC_0128 hypothetical protein; hypothetical protein 3626299..3626517 Ralstonia pickettii 12D 8021118 YP_002983370.1 CDS Rpic12D_3434 NC_012856.1 3626517 3627386 D hypothetical protein 3626517..3627386 Ralstonia pickettii 12D 8021119 YP_002983371.1 CDS Rpic12D_3435 NC_012856.1 3627981 3628403 D hypothetical protein 3627981..3628403 Ralstonia pickettii 12D 8021120 YP_002983372.1 CDS Rpic12D_3436 NC_012856.1 3628631 3629533 D hypothetical protein 3628631..3629533 Ralstonia pickettii 12D 8021121 YP_002983373.1 CDS Rpic12D_3437 NC_012856.1 3629607 3630149 R KEGG: rso:RSc3250 signal peptide protein; signal transduction histidine kinase LytS complement(3629607..3630149) Ralstonia pickettii 12D 8021122 YP_002983374.1 CDS Rpic12D_3438 NC_012856.1 3630183 3630542 R KEGG: rso:RSc3249 signal peptide protein; signal peptide protein complement(3630183..3630542) Ralstonia pickettii 12D 8021123 YP_002983375.1 CDS Rpic12D_3439 NC_012856.1 3630835 3631221 R KEGG: bcm:Bcenmc03_5690 hypothetical protein; hypothetical protein complement(3630835..3631221) Ralstonia pickettii 12D 8021124 YP_002983376.1 CDS Rpic12D_3440 NC_012856.1 3631392 3631643 D KEGG: bvi:Bcep1808_3440 hypothetical protein; hypothetical protein 3631392..3631643 Ralstonia pickettii 12D 8021125 YP_002983377.1 CDS Rpic12D_3441 NC_012856.1 3631706 3632542 D hypothetical protein 3631706..3632542 Ralstonia pickettii 12D 8021126 YP_002983378.1 CDS Rpic12D_3442 NC_012856.1 3632886 3633137 R hypothetical protein complement(3632886..3633137) Ralstonia pickettii 12D 8021127 YP_002983379.1 CDS Rpic12D_3443 NC_012856.1 3633130 3633444 R KEGG: bam:Bamb_0905 hypothetical protein; hypothetical protein complement(3633130..3633444) Ralstonia pickettii 12D 8021128 YP_002983380.1 CDS Rpic12D_3444 NC_012856.1 3633441 3633701 R KEGG: bam:Bamb_0904 hypothetical protein; hypothetical protein complement(3633441..3633701) Ralstonia pickettii 12D 8021129 YP_002983381.1 CDS Rpic12D_3445 NC_012856.1 3633804 3635366 R KEGG: bam:Bamb_0903 hypothetical protein; hypothetical protein complement(3633804..3635366) Ralstonia pickettii 12D 8021130 YP_002983382.1 CDS Rpic12D_3446 NC_012856.1 3635370 3635561 R hypothetical protein complement(3635370..3635561) Ralstonia pickettii 12D 8021131 YP_002983383.1 CDS Rpic12D_3447 NC_012856.1 3635551 3637344 R KEGG: lpp:lpp2117 hypothetical protein; hypothetical protein complement(3635551..3637344) Ralstonia pickettii 12D 8021132 YP_002983384.1 CDS Rpic12D_3448 NC_012856.1 3637354 3638067 R KEGG: tbd:Tbd_2069 hypothetical protein; hypothetical protein complement(3637354..3638067) Ralstonia pickettii 12D 8021133 YP_002983385.1 CDS Rpic12D_3449 NC_012856.1 3638177 3638344 R KEGG: hypothetical protein; hypothetical protein complement(3638177..3638344) Ralstonia pickettii 12D 8021134 YP_002983386.1 CDS Rpic12D_3450 NC_012856.1 3638341 3638580 R KEGG: xcv:XCV2220 hypothetical protein; hypothetical protein complement(3638341..3638580) Ralstonia pickettii 12D 8021135 YP_002983387.1 CDS Rpic12D_3451 NC_012856.1 3638591 3638821 R PFAM: Prophage CP4-57 regulatory; KEGG: bam:Bamb_0909 phage transcriptional regulator, AlpA; phage transcriptional regulator AlpA complement(3638591..3638821) Ralstonia pickettii 12D 8021136 YP_002983388.1 CDS Rpic12D_3452 NC_012856.1 3638977 3640071 R KEGG: bcj:BCAL2599 hypothetical protein; hypothetical protein complement(3638977..3640071) Ralstonia pickettii 12D 8021137 YP_002983389.1 CDS Rpic12D_3453 NC_012856.1 3640181 3640648 R hypothetical protein complement(3640181..3640648) Ralstonia pickettii 12D 8021138 YP_002983390.1 CDS Rpic12D_3454 NC_012856.1 3640645 3641505 R hypothetical protein complement(3640645..3641505) Ralstonia pickettii 12D 8021139 YP_002983391.1 CDS Rpic12D_3455 NC_012856.1 3641609 3642841 R PFAM: integrase family protein; KEGG: bpm:BURPS1710b_0308 integrase or site-specific recombinase; integrase family protein complement(3641609..3642841) Ralstonia pickettii 12D 8021140 YP_002983392.1 CDS trmE NC_012856.1 3643007 3644452 R in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE complement(3643007..3644452) Ralstonia pickettii 12D 8021141 YP_002983393.1 CDS Rpic12D_3458 NC_012856.1 3644984 3646648 R functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC complement(3644984..3646648) Ralstonia pickettii 12D 8021143 YP_002983394.1 CDS Rpic12D_3459 NC_012856.1 3646655 3647092 R PFAM: protein of unknown function DUF37; KEGG: rso:RSc0003 hypothetical protein; hypothetical protein complement(3646655..3647092) Ralstonia pickettii 12D 8021144 YP_002983395.1 CDS Rpic12D_3460 NC_012856.1 3647089 3647511 R TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: rso:RSc0002 ribonuclease P protein component; ribonuclease P complement(3647089..3647511) Ralstonia pickettii 12D 8021145 YP_002983396.1 CDS rpmH NC_012856.1 3647573 3647707 R in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 complement(3647573..3647707) Ralstonia pickettii 12D 8021146 YP_002983397.1 CDS Rpic12D_3462 NC_012857.1 67 1413 D An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine; homogentisate 1,2-dioxygenase 67..1413 Ralstonia pickettii 12D 8022360 YP_002983398.1 CDS Rpic12D_3463 NC_012857.1 1720 2991 D KEGG: rso:RS01759 fumarylacetoacetase; TIGRFAM: fumarylacetoacetase; PFAM: Domain of unknown function DUF1969; fumarylacetoacetate hydrolase; fumarylacetoacetase 1720..2991 Ralstonia pickettii 12D 8021149 YP_002983399.1 CDS Rpic12D_3464 NC_012857.1 3031 3669 R PFAM: negative transcriptional regulator; KEGG: rso:RS01760 hypothetical protein; FMN-binding negative transcriptional regulator complement(3031..3669) Ralstonia pickettii 12D 8021150 YP_002983400.1 CDS Rpic12D_3465 NC_012857.1 3793 5103 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bac:BamMC406_6182 ABC transporter; ABC transporter complement(3793..5103) Ralstonia pickettii 12D 8021151 YP_002983401.1 CDS Rpic12D_3466 NC_012857.1 5109 6842 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: bmj:BMULJ_05602 sulfonate/nitrate/taurine transport system permease; binding-protein-dependent transporters inner membrane component complement(5109..6842) Ralstonia pickettii 12D 8021152 YP_002983402.1 CDS Rpic12D_3467 NC_012857.1 6980 8137 R PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: rso:RS01762 acyl-CoA dehydrogenase oxidoreductase protein; acyl-CoA dehydrogenase domain-containing protein complement(6980..8137) Ralstonia pickettii 12D 8021153 YP_002983403.1 CDS Rpic12D_3468 NC_012857.1 8250 9170 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cti:RALTA_B0091 LysR family transcriptional regulator; LysR family transcriptional regulator 8250..9170 Ralstonia pickettii 12D 8021154 YP_002983404.1 CDS Rpic12D_3469 NC_012857.1 9171 10088 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RSp0677 transcriptional activator MetR transcription regulator protein; LysR family transcriptional regulator complement(9171..10088) Ralstonia pickettii 12D 8021155 YP_002983405.1 CDS Rpic12D_3470 NC_012857.1 10209 12539 D catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 10209..12539 Ralstonia pickettii 12D 8021156 YP_002983406.1 CDS Rpic12D_3471 NC_012857.1 12656 15757 R PFAM: acriflavin resistance protein; KEGG: rso:RS01779 transporter lipoprotein transmembrane; acriflavin resistance protein complement(12656..15757) Ralstonia pickettii 12D 8021157 YP_002983407.1 CDS Rpic12D_3472 NC_012857.1 15754 16893 R TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: rso:RS01779 transporter lipoprotein transmembrane; RND family efflux transporter MFP subunit complement(15754..16893) Ralstonia pickettii 12D 8021158 YP_002983408.1 CDS Rpic12D_3473 NC_012857.1 16890 18467 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rso:RS01780 outer membrane channel lipoprotein; NodT family RND efflux system outer membrane lipoprotein complement(16890..18467) Ralstonia pickettii 12D 8021159 YP_002983409.1 CDS Rpic12D_3474 NC_012857.1 18600 18755 R KEGG: bxe:Bxe_B0444 hypothetical protein; hypothetical protein complement(18600..18755) Ralstonia pickettii 12D 8021160 YP_002983410.1 CDS Rpic12D_3475 NC_012857.1 18942 19823 D PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: rso:RS01781 hypothetical protein; coenzyme F420-dependent NADP oxidoreductase 18942..19823 Ralstonia pickettii 12D 8021161 YP_002983411.1 CDS Rpic12D_3476 NC_012857.1 19910 21124 D PFAM: major facilitator superfamily MFS_1; KEGG: rso:RS01782 CynX-related transport transmembrane protein; major facilitator superfamily protein 19910..21124 Ralstonia pickettii 12D 8021162 YP_002983412.1 CDS Rpic12D_3477 NC_012857.1 21135 21701 R KEGG: rso:RSp0666 DNA-3-methyladenine glycosylase I protein; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase; DNA-3-methyladenine glycosylase I complement(21135..21701) Ralstonia pickettii 12D 8021163 YP_002983413.1 CDS Rpic12D_3478 NC_012857.1 21713 22684 R PFAM: Mg2 transporter protein CorA family protein; KEGG: rso:RS01784 magnesium/cobalt transporter CorA; Mg2 transporter protein CorA family protein complement(21713..22684) Ralstonia pickettii 12D 8021164 YP_002983414.1 CDS Rpic12D_3479 NC_012857.1 22703 23200 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rso:RS01785 transcription regulator protein; MarR family transcriptional regulator complement(22703..23200) Ralstonia pickettii 12D 8021165 YP_002983415.1 CDS Rpic12D_3480 NC_012857.1 23263 24855 R PFAM: major facilitator superfamily MFS_1; KEGG: rso:RS01786 transport transmembrane protein; major facilitator superfamily protein complement(23263..24855) Ralstonia pickettii 12D 8021166 YP_002983416.1 CDS Rpic12D_3481 NC_012857.1 25044 27629 R catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase complement(25044..27629) Ralstonia pickettii 12D 8021167 YP_002983417.1 CDS Rpic12D_3482 NC_012857.1 28002 28295 D PFAM: antibiotic biosynthesis monooxygenase; KEGG: bac:BamMC406_5978 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase 28002..28295 Ralstonia pickettii 12D 8021168 YP_002983418.1 CDS Rpic12D_3483 NC_012857.1 28409 29353 R KEGG: reh:H16_B0303 hypothetical protein; hypothetical protein complement(28409..29353) Ralstonia pickettii 12D 8021169 YP_002983419.1 CDS Rpic12D_3484 NC_012857.1 29476 30354 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bmj:BMULJ_05672 LysR family transcriptional regulator; LysR family transcriptional regulator complement(29476..30354) Ralstonia pickettii 12D 8021170 YP_002983420.1 CDS Rpic12D_3485 NC_012857.1 30452 32035 D Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 30452..32035 Ralstonia pickettii 12D 8021171 YP_002983421.1 CDS Rpic12D_3486 NC_012857.1 32056 34638 D KEGG: aav:Aave_4033 hypothetical protein; hypothetical protein 32056..34638 Ralstonia pickettii 12D 8021172 YP_002983422.1 CDS Rpic12D_3487 NC_012857.1 34705 35892 D PFAM: acyltransferase 3; KEGG: rso:RS03732 acyltransferase transmembrane protein; acyltransferase 3 34705..35892 Ralstonia pickettii 12D 8021173 YP_002983423.1 CDS Rpic12D_3488 NC_012857.1 35882 36700 R PFAM: methyltransferase type 11; UbiE/COQ5 methyltransferase; methyltransferase type 12; KEGG: rme:Rmet_3846 methyltransferase type 11; type 11 methyltransferase complement(35882..36700) Ralstonia pickettii 12D 8021174 YP_002983424.1 CDS Rpic12D_3490 NC_012857.1 37411 38034 D PFAM: regulatory protein TetR; KEGG: rso:RS03754 transcription regulator protein; TetR family transcriptional regulator 37411..38034 Ralstonia pickettii 12D 8021176 YP_002983425.1 CDS Rpic12D_3491 NC_012857.1 38019 39113 R TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: rso:RSp0608 ferredoxin reductase protein; phenylacetate-CoA oxygenase/reductase subunit PaaK complement(38019..39113) Ralstonia pickettii 12D 8021177 YP_002983426.1 CDS Rpic12D_3492 NC_012857.1 39123 39674 R TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; KEGG: rso:RSp0607 phenylacetic acid degradation protein; phenylacetate-CoA oxygenase subunit PaaJ complement(39123..39674) Ralstonia pickettii 12D 8021178 YP_002983427.1 CDS Rpic12D_3493 NC_012857.1 39668 40468 R TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: rso:RSp0606 phenylacetic acid degradation protein; phenylacetate-CoA oxygenase subunit PaaI complement(39668..40468) Ralstonia pickettii 12D 8021179 YP_002983428.1 CDS paaB NC_012857.1 40478 40765 R with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; phenylacetate-CoA oxygenase subunit PaaB complement(40478..40765) Ralstonia pickettii 12D 8021180 YP_002983429.1 CDS paaA NC_012857.1 40782 41801 R with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; phenylacetate-CoA oxygenase subunit PaaA complement(40782..41801) Ralstonia pickettii 12D 8021181 YP_002983430.1 CDS Rpic12D_3496 NC_012857.1 41946 43394 R TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bbr:BB2411 transmembrane efflux protein; EmrB/QacA subfamily drug resistance transporter complement(41946..43394) Ralstonia pickettii 12D 8021182 YP_002983431.1 CDS Rpic12D_3497 NC_012857.1 43494 43925 R PFAM: 3-demethylubiquinone-9 3-methyltransferase; glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rso:RSp0601 hypothetical protein; 3-demethylubiquinone-9 3-methyltransferase complement(43494..43925) Ralstonia pickettii 12D 8021183 YP_002983432.1 CDS Rpic12D_3498 NC_012857.1 44074 44457 R KEGG: rso:RS03879 hypothetical protein; Ketosteroid isomerase-like protein complement(44074..44457) Ralstonia pickettii 12D 8021184 YP_002983433.1 CDS Rpic12D_3499 NC_012857.1 44579 45223 D PFAM: regulatory protein TetR; KEGG: rso:RS03880 transcription regulator protein; TetR family transcriptional regulator 44579..45223 Ralstonia pickettii 12D 8021185 YP_002983434.1 CDS Rpic12D_3500 NC_012857.1 45300 45821 D KEGG: reu:Reut_B4200 transmembrane protein; hypothetical protein 45300..45821 Ralstonia pickettii 12D 8021186 YP_002983435.1 CDS Rpic12D_3501 NC_012857.1 45876 46826 R PFAM: CheW domain protein; response regulator receiver; SMART: CheW domain protein; response regulator receiver; KEGG: rso:RS03881 response regulator transcription regulator protein; response regulator receiver modulated CheW protein complement(45876..46826) Ralstonia pickettii 12D 8021187 YP_002983436.1 CDS Rpic12D_3502 NC_012857.1 47566 48864 R KEGG: bmj:BMULJ_03774 hypothetical protein; hypothetical protein complement(47566..48864) Ralstonia pickettii 12D 8021189 YP_002983437.1 CDS Rpic12D_3503 NC_012857.1 48861 49898 R SMART: ATPase AAA; KEGG: bmj:BMULJ_03775 probable ATPase; ATPase AAA complement(48861..49898) Ralstonia pickettii 12D 8021190 YP_002983438.1 CDS Rpic12D_3504 NC_012857.1 49908 52610 R PFAM: Integrase catalytic region; TnsA endonuclease; KEGG: bmu:Bmul_4740 integrase catalytic region; integrase catalytic subunit complement(49908..52610) Ralstonia pickettii 12D 8021191 YP_002983439.1 CDS Rpic12D_3505 NC_012857.1 52759 53058 D KEGG: bmj:BMULJ_03776 hypothetical protein; hypothetical protein 52759..53058 Ralstonia pickettii 12D 8021192 YP_002983440.1 CDS Rpic12D_3506 NC_012857.1 53893 54282 D KEGG: rme:Rmet_5461 hypothetical protein; hypothetical protein 53893..54282 Ralstonia pickettii 12D 8021193 YP_002983441.1 CDS Rpic12D_3507 NC_012857.1 54557 54886 R KEGG: bph:Bphy_6961 hypothetical protein; hypothetical protein complement(54557..54886) Ralstonia pickettii 12D 8021194 YP_002983442.1 CDS Rpic12D_3508 NC_012857.1 55244 55396 R hypothetical protein complement(55244..55396) Ralstonia pickettii 12D 8021195 YP_002983443.1 CDS Rpic12D_3509 NC_012857.1 55650 55940 R KEGG: bps:BPSL0566 hypothetical protein; hypothetical protein complement(55650..55940) Ralstonia pickettii 12D 8021196 YP_002983444.1 CDS Rpic12D_3510 NC_012857.1 56247 57260 R hypothetical protein complement(56247..57260) Ralstonia pickettii 12D 8021197 YP_002983445.1 CDS Rpic12D_3511 NC_012857.1 57263 58270 R hypothetical protein complement(57263..58270) Ralstonia pickettii 12D 8021198 YP_002983446.1 CDS Rpic12D_3513 NC_012857.1 59662 60387 R PFAM: 17 kDa surface antigen; KEGG: rso:RSc1027 hypothetical protein; 17 kDa surface antigen complement(59662..60387) Ralstonia pickettii 12D 8021200 YP_002983447.1 CDS Rpic12D_3514 NC_012857.1 60754 60957 R KEGG: bac:BamMC406_4365 hypothetical protein; hypothetical protein complement(60754..60957) Ralstonia pickettii 12D 8021201 YP_002983448.1 CDS Rpic12D_3515 NC_012857.1 61702 61836 D hypothetical protein 61702..61836 Ralstonia pickettii 12D 8021202 YP_002983449.1 CDS Rpic12D_3516 NC_012857.1 61931 62323 D KEGG: mpt:Mpe_A1934 hypothetical protein; hypothetical protein 61931..62323 Ralstonia pickettii 12D 8021203 YP_002983450.1 CDS Rpic12D_3517 NC_012857.1 62491 63141 D KEGG: bph:Bphy_6783 hypothetical protein; hypothetical protein 62491..63141 Ralstonia pickettii 12D 8021204 YP_002983451.1 CDS Rpic12D_3518 NC_012857.1 63989 64747 R PFAM: protein of unknown function DUF347; KEGG: rme:Rmet_4979 protein of unknown function DUF347; hypothetical protein complement(63989..64747) Ralstonia pickettii 12D 8021205 YP_002983452.1 CDS Rpic12D_3519 NC_012857.1 65456 66769 D PFAM: major facilitator superfamily MFS_1; KEGG: pol:Bpro_3934 major facilitator superfamily MFS_1; major facilitator superfamily protein 65456..66769 Ralstonia pickettii 12D 8021206 YP_002983453.1 CDS Rpic12D_3520 NC_012857.1 66887 67447 R TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase; KEGG: rfr:Rfer_3389 alkylhydroperoxidase; alkylhydroperoxidase-like protein complement(66887..67447) Ralstonia pickettii 12D 8021207 YP_002983454.1 CDS Rpic12D_3521 NC_012857.1 67773 68324 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: shl:Shal_3552 ECF subfamily RNA polymerase sigma-24 factor; ECF subfamily RNA polymerase sigma-24 subunit complement(67773..68324) Ralstonia pickettii 12D 8021208 YP_002983455.1 CDS Rpic12D_3522 NC_012857.1 68328 68537 R KEGG: nar:Saro_3962 hypothetical protein; hypothetical protein complement(68328..68537) Ralstonia pickettii 12D 8021209 YP_002983456.1 CDS Rpic12D_3523 NC_012857.1 68643 69083 R KEGG: eba:ebA6447 hypothetical protein; hypothetical protein complement(68643..69083) Ralstonia pickettii 12D 8021210 YP_002983457.1 CDS Rpic12D_3524 NC_012857.1 69196 69924 R PFAM: cytochrome C biogenesis protein transmembrane region; KEGG: mrd:Mrad2831_2559 cytochrome C biogenesis protein transmembrane region; cytochrome c biogenesis protein transmembrane protein complement(69196..69924) Ralstonia pickettii 12D 8021211 YP_002983458.1 CDS Rpic12D_3525 NC_012857.1 69924 70310 R PFAM: thioredoxin domain; KEGG: bbt:BBta_3389 thioredoxin (H-type,TRX-H); thioredoxin complement(69924..70310) Ralstonia pickettii 12D 8021212 YP_002983459.1 CDS Rpic12D_3526 NC_012857.1 70494 70733 D hypothetical protein 70494..70733 Ralstonia pickettii 12D 8021213 YP_002983460.1 CDS Rpic12D_3527 NC_012857.1 70703 71431 D KEGG: rce:RC1_1434 hypothetical protein; hypothetical protein 70703..71431 Ralstonia pickettii 12D 8021214 YP_002983461.1 CDS Rpic12D_3528 NC_012857.1 71744 72643 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rce:RC1_1937 LysR family transcriptional regulator protein; LysR family transcriptional regulator complement(71744..72643) Ralstonia pickettii 12D 8021215 YP_002983462.1 CDS Rpic12D_3529 NC_012857.1 72709 73275 D hypothetical protein 72709..73275 Ralstonia pickettii 12D 8021216 YP_002983463.1 CDS Rpic12D_3531 NC_012857.1 73548 73979 D PFAM: copper resistance protein CopC; KEGG: bcj:BCAM0449 copper-resistance exported protein; copper resistance protein CopC 73548..73979 Ralstonia pickettii 12D 8021218 YP_002983464.1 CDS Rpic12D_3532 NC_012857.1 73979 74923 D PFAM: copper resistance D domain protein; KEGG: bpl:BURPS1106A_A0625 copper resistance protein D; copper resistance D domain-containing protein 73979..74923 Ralstonia pickettii 12D 8021219 YP_002983465.1 CDS Rpic12D_3533 NC_012857.1 75135 77495 D KEGG: bvi:Bcep1808_3972 heavy metal translocating P-type ATPase; TIGRFAM: ATPase P; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; YHS domain protein; Haloacid dehalogenase domain protein hydrolase; SMART: TRASH domain protein; ATPase P 75135..77495 Ralstonia pickettii 12D 8021220 YP_002983466.1 CDS dsbG NC_012857.1 77850 78710 R Involved in disulfide bond formation; disulfide isomerase/thiol-disulfide oxidase complement(77850..78710) Ralstonia pickettii 12D 8021221 YP_002983467.1 CDS Rpic12D_3535 NC_012857.1 79314 79889 D PFAM: regulatory protein TetR; KEGG: pfo:Pfl01_2955 TetR family transcriptional regulator; TetR family transcriptional regulator 79314..79889 Ralstonia pickettii 12D 8021222 YP_002983468.1 CDS Rpic12D_3536 NC_012857.1 80217 81980 D PFAM: EAL domain protein; GGDEF domain containing protein; CBS domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; KEGG: bpy:Bphyt_0426 diguanylate cyclase/phosphodiesterase; diguanylate cyclase/phosphodiesterase 80217..81980 Ralstonia pickettii 12D 8021223 YP_002983469.1 CDS Rpic12D_3537 NC_012857.1 82256 83680 D PFAM: phosphoesterase; KEGG: bpy:Bphyt_5961 phosphoesterase; phospholipase C 82256..83680 Ralstonia pickettii 12D 8021224 YP_002983470.1 CDS Rpic12D_3538 NC_012857.1 83684 84898 D PFAM: phosphoesterase; KEGG: nca:Noca_3200 phosphoesterase; phosphoesterase 83684..84898 Ralstonia pickettii 12D 8021225 YP_002983471.1 CDS Rpic12D_3539 NC_012857.1 85053 86279 D TIGRFAM: chromate transporter chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: bxe:Bxe_B0092 chromate transporter; chromate transporter 85053..86279 Ralstonia pickettii 12D 8021226 YP_002983472.1 CDS Rpic12D_3540 NC_012857.1 86542 86733 R TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; KEGG: reu:Reut_B5693 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase complement(86542..86733) Ralstonia pickettii 12D 8021227 YP_002983473.1 CDS Rpic12D_3541 NC_012857.1 86778 87824 R catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate; 4-hydroxy-2-ketovalerate aldolase complement(86778..87824) Ralstonia pickettii 12D 8021228 YP_002983474.1 CDS Rpic12D_3542 NC_012857.1 87838 88773 R catalyzes the formation of acetyl-CoA from acetalaldehyde; acetaldehyde dehydrogenase complement(87838..88773) Ralstonia pickettii 12D 8021229 YP_002983475.1 CDS Rpic12D_3543 NC_012857.1 88811 89602 R KEGG: reu:Reut_B5692 4-oxalocrotonate decarboxylase; TIGRFAM: 4-oxalocrotonate decarboxylase; PFAM: fumarylacetoacetate hydrolase; 4-oxalocrotonate decarboxylase complement(88811..89602) Ralstonia pickettii 12D 8021230 YP_002983476.1 CDS Rpic12D_3544 NC_012857.1 89632 90414 R KEGG: reu:Reut_B5691 4-oxalocrotonate decarboxylase; TIGRFAM: 2-oxopent-4-enoate hydratase; PFAM: fumarylacetoacetate (FAA) hydrolase; 2-oxopent-4-enoate hydratase complement(89632..90414) Ralstonia pickettii 12D 8021231 YP_002983477.1 CDS Rpic12D_3545 NC_012857.1 90440 91291 R PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: reu:Reut_B5690 alpha/beta hydrolase fold; alpha/beta hydrolase complement(90440..91291) Ralstonia pickettii 12D 8021232 YP_002983478.1 CDS Rpic12D_3546 NC_012857.1 91288 92742 R TIGRFAM: 2-hydroxymuconic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: reu:Reut_B5689 betaine-aldehyde dehydrogenase; 2-hydroxymuconic semialdehyde dehydrogenase complement(91288..92742) Ralstonia pickettii 12D 8021233 YP_002983479.1 CDS Rpic12D_3547 NC_012857.1 92792 93244 R PFAM: protein of unknown function DUF336; KEGG: reu:Reut_B5688 hypothetical protein; hypothetical protein complement(92792..93244) Ralstonia pickettii 12D 8021234 YP_002983480.1 CDS Rpic12D_3548 NC_012857.1 93303 94247 R TIGRFAM: catechol 2,3 dioxygenase; PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: reu:Reut_B5687 catechol 2,3-dioxygenase; catechol 2,3 dioxygenase complement(93303..94247) Ralstonia pickettii 12D 8021235 YP_002983481.1 CDS Rpic12D_3549 NC_012857.1 94271 94636 R PFAM: ferredoxin; KEGG: reu:Reut_B5686 ferredoxin; ferredoxin complement(94271..94636) Ralstonia pickettii 12D 8021236 YP_002983482.1 CDS Rpic12D_3550 NC_012857.1 94652 95716 R PFAM: oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; ferredoxin; KEGG: reu:Reut_B5685 ferredoxin:oxidoreductase FAD/NAD(P)-binding:oxidoreductase FAD-binding region; oxidoreductase FAD-binding domain-containing protein complement(94652..95716) Ralstonia pickettii 12D 8021237 YP_002983483.1 CDS Rpic12D_3551 NC_012857.1 95720 96085 R PFAM: phenol hydroxylase; KEGG: reu:Reut_B5684 phenol hydroxylase region; phenol hydroxylase complement(95720..96085) Ralstonia pickettii 12D 8021238 YP_002983484.1 CDS Rpic12D_3552 NC_012857.1 96082 97626 R PFAM: methane/phenol/toluene hydroxylase; YHS domain protein; KEGG: reu:Reut_B5683 methane/phenol/toluene hydroxylase:YHS; methane/phenol/toluene hydroxylase complement(96082..97626) Ralstonia pickettii 12D 8021239 YP_002983485.1 CDS Rpic12D_3553 NC_012857.1 97672 97941 R PFAM: monooxygenase component MmoB/DmpM; KEGG: reu:Reut_B5682 monooxygenase component MmoB/DmpM; monooxygenase component MmoB/DmpM complement(97672..97941) Ralstonia pickettii 12D 8021240 YP_002983486.1 CDS Rpic12D_3554 NC_012857.1 97977 98984 R PFAM: methane/phenol/toluene hydroxylase; KEGG: reu:Reut_B5681 methane/phenol/toluene hydroxylase; phenol 2-monooxygenase complement(97977..98984) Ralstonia pickettii 12D 8021241 YP_002983487.1 CDS Rpic12D_3555 NC_012857.1 99040 99249 R PFAM: phenol hydroxylase; KEGG: reu:Reut_B5680 phenol hydroxylase; phenol hydroxylase complement(99040..99249) Ralstonia pickettii 12D 8021242 YP_002983488.1 CDS Rpic12D_3556 NC_012857.1 99964 101469 D PFAM: methane/phenol/toluene hydroxylase; YHS domain protein; KEGG: reu:Reut_B5679 methane/phenol/toluene hydroxylase:YHS; methane/phenol/toluene hydroxylase 99964..101469 Ralstonia pickettii 12D 8021243 YP_002983489.1 CDS Rpic12D_3557 NC_012857.1 101494 101754 D PFAM: toluene-4-monooxygenase system B; KEGG: reu:Reut_B5678 toluene-4-monooxygenase system B; toluene-4-monooxygenase system B 101494..101754 Ralstonia pickettii 12D 8021244 YP_002983490.1 CDS Rpic12D_3558 NC_012857.1 101762 102097 D PFAM: Rieske [2Fe-2S] domain protein; KEGG: reu:Reut_B5677 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein 101762..102097 Ralstonia pickettii 12D 8021245 YP_002983491.1 CDS Rpic12D_3559 NC_012857.1 102117 102431 D PFAM: monooxygenase component MmoB/DmpM; KEGG: reu:Reut_B5676 monooxygenase component MmoB/DmpM; monooxygenase component MmoB/DmpM 102117..102431 Ralstonia pickettii 12D 8021246 YP_002983492.1 CDS Rpic12D_3560 NC_012857.1 102444 103433 D PFAM: methane/phenol/toluene hydroxylase; KEGG: reu:Reut_B5675 methane/phenol/toluene hydroxylase; methane/phenol/toluene hydroxylase 102444..103433 Ralstonia pickettii 12D 8021247 YP_002983493.1 CDS Rpic12D_3561 NC_012857.1 103471 104502 D PFAM: oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; ferredoxin; KEGG: reu:Reut_B5674 ferredoxin:oxidoreductase FAD/NAD(P)-binding:oxidoreductase FAD-binding region; oxidoreductase FAD-binding domain-containing protein 103471..104502 Ralstonia pickettii 12D 8021248 YP_002983494.1 CDS Rpic12D_3562 NC_012857.1 104756 106534 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; 4-vinyl reductase 4VR; activator of aromatic catabolism; SMART: ATPase AAA; KEGG: reu:Reut_B5673 helix-turn-helix, fis-type; Fis family transcriptional regulator 104756..106534 Ralstonia pickettii 12D 8021249 YP_002983495.1 CDS Rpic12D_3563 NC_012857.1 106598 107974 R PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: reu:Reut_B5672 aromatic hydrocarbon degradation protein; aromatic hydrocarbon degradation membrane protein complement(106598..107974) Ralstonia pickettii 12D 8021250 YP_002983496.1 CDS Rpic12D_3564 NC_012857.1 108420 110114 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; 4-vinyl reductase 4VR; activator of aromatic catabolism; SMART: ATPase AAA; KEGG: reu:Reut_B5671 helix-turn-helix, fis-type; Fis family transcriptional regulator 108420..110114 Ralstonia pickettii 12D 8021251 YP_002983497.1 CDS Rpic12D_3565 NC_012857.1 110111 110860 D PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: reu:Reut_B5670 GntR family transcriptional regulator; GntR family transcriptional regulator 110111..110860 Ralstonia pickettii 12D 8021252 YP_002983498.1 CDS Rpic12D_3566 NC_012857.1 110945 113605 R TIGRFAM: formate dehydrogenase, subunit alpha; PFAM: molybdopterin oxidoreductase; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: sen:SACE_2432 formate dehydrogenase, subunit alpha; formate dehydrogenase subunit alpha complement(110945..113605) Ralstonia pickettii 12D 8021253 YP_002983499.1 CDS Rpic12D_3567 NC_012857.1 113593 115035 R PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: swi:Swit_1474 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) complement(113593..115035) Ralstonia pickettii 12D 8021254 YP_002983500.1 CDS Rpic12D_3568 NC_012857.1 115281 117047 D Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 115281..117047 Ralstonia pickettii 12D 8021255 YP_002983501.1 CDS Rpic12D_3569 NC_012857.1 117044 118069 D KEGG: bte:BTH_II0928 pyruvate dehydrogenase, E1 component, subunit alpha; TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, subunit alpha; PFAM: dehydrogenase E1 component; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha 117044..118069 Ralstonia pickettii 12D 8021256 YP_002983502.1 CDS Rpic12D_3570 NC_012857.1 118066 119049 D PFAM: transketolase; transketolase domain protein; KEGG: bte:BTH_II0929 pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase subunit beta; transketolase 118066..119049 Ralstonia pickettii 12D 8021257 YP_002983503.1 CDS Rpic12D_3571 NC_012857.1 119087 120214 D PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: bte:BTH_II0930 branched-chain alpha-keto acid dehydrogenase subunit E2; branched-chain alpha-keto acid dehydrogenase subunit E2 119087..120214 Ralstonia pickettii 12D 8021258 YP_002983504.1 CDS Rpic12D_3572 NC_012857.1 120211 120480 D KEGG: bph:Bphy_7032 hypothetical protein; hypothetical protein 120211..120480 Ralstonia pickettii 12D 8021259 YP_002983505.1 CDS Rpic12D_3573 NC_012857.1 120535 120963 R KEGG: bpm:BURPS1710b_2475 RedA; hypothetical protein complement(120535..120963) Ralstonia pickettii 12D 8021260 YP_002983506.1 CDS Rpic12D_3574 NC_012857.1 121045 122445 R KEGG: reu:Reut_A1215 PAS; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; hypothetical protein; SMART: PAS domain containing protein; ATP-binding region ATPase domain protein; PAS/PAC sensor signal transduction histidine kinase complement(121045..122445) Ralstonia pickettii 12D 8021261 YP_002983507.1 CDS Rpic12D_3575 NC_012857.1 122812 123150 D KEGG: bte:BTH_I2124 sigma 54 modulation protein; sigma 54 modulation protein 122812..123150 Ralstonia pickettii 12D 8021262 YP_002983508.1 CDS Rpic12D_3576 NC_012857.1 123747 125384 D TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: reh:H16_A1997 chaperonin GroEL (HSP60 family); chaperonin GroEL 123747..125384 Ralstonia pickettii 12D 8021263 YP_002983509.1 CDS Rpic12D_3577 NC_012857.1 125426 126787 D catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 125426..126787 Ralstonia pickettii 12D 8021264 YP_002983510.1 CDS Rpic12D_3578 NC_012857.1 126895 127566 R Involved in anaerobic NO protection and iron metabolism; iron-sulfur cluster repair di-iron protein complement(126895..127566) Ralstonia pickettii 12D 8021265 YP_002983511.1 CDS Rpic12D_3579 NC_012857.1 127731 129266 D Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon; anaerobic nitric oxide reductase transcriptional regulator 127731..129266 Ralstonia pickettii 12D 8021266 YP_002983512.1 CDS Rpic12D_3580 NC_012857.1 129453 131504 D Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 129453..131504 Ralstonia pickettii 12D 8021267 YP_002983513.1 CDS Rpic12D_3581 NC_012857.1 131501 131677 D KEGG: rso:RS02295 hypothetical protein; hypothetical protein 131501..131677 Ralstonia pickettii 12D 8021268 YP_002983514.1 CDS Rpic12D_3582 NC_012857.1 131640 132353 D TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: radical SAM protein; KEGG: rso:RSp0965 ribonucleotide reductase activating transmembrane protein; anaerobic ribonucleoside-triphosphate reductase activating protein 131640..132353 Ralstonia pickettii 12D 8021269 YP_002983515.1 CDS Rpic12D_3583 NC_012857.1 132358 133035 D PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: rso:RS02297 transcription regulator protein; Crp/Fnr family transcriptional regulator 132358..133035 Ralstonia pickettii 12D 8021270 YP_002983516.1 CDS Rpic12D_3584 NC_012857.1 133132 133557 R PFAM: DGC domain protein; KEGG: rso:RS02298 lipoprotein; DGC domain-containing protein complement(133132..133557) Ralstonia pickettii 12D 8021271 YP_002983517.1 CDS Rpic12D_3585 NC_012857.1 133590 134006 R KEGG: rso:RS02299 hypothetical protein; hypothetical protein complement(133590..134006) Ralstonia pickettii 12D 8021272 YP_002983518.1 CDS Rpic12D_3586 NC_012857.1 134003 134887 R PFAM: peptidase U32; KEGG: rso:RS02300 hypothetical protein; peptidase U32 complement(134003..134887) Ralstonia pickettii 12D 8021273 YP_002983519.1 CDS Rpic12D_3587 NC_012857.1 134898 135962 R PFAM: peptidase U32; KEGG: rso:RS02301 protease protein; peptidase U32 complement(134898..135962) Ralstonia pickettii 12D 8021274 YP_002983520.1 CDS Rpic12D_3588 NC_012857.1 135959 137242 R KEGG: rso:RS02303 hypothetical protein; hypothetical protein complement(135959..137242) Ralstonia pickettii 12D 8021275 YP_002983521.1 CDS Rpic12D_3589 NC_012857.1 137478 138794 D PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSp0972 nitrite/nitrate ABC transporter transmembrane protein; major facilitator superfamily protein 137478..138794 Ralstonia pickettii 12D 8021276 YP_002983522.1 CDS Rpic12D_3590 NC_012857.1 138844 140229 D TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSp0973 nitrite/nitrate ABC transporter transmembrane protein; nitrite transporter 138844..140229 Ralstonia pickettii 12D 8021277 YP_002983523.1 CDS Rpic12D_3591 NC_012857.1 140242 140910 R PFAM: protein of unknown function DUF161; KEGG: eca:ECA3669 hypothetical protein; hypothetical protein complement(140242..140910) Ralstonia pickettii 12D 8021278 YP_002983524.1 CDS Rpic12D_3592 NC_012857.1 141195 144932 D TIGRFAM: nitrate reductase, subunit alpha; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: rso:RSp0974 respiratory nitrate reductase alpha chain oxidoreductase protein; nitrate reductase subunit alpha 141195..144932 Ralstonia pickettii 12D 8021279 YP_002983525.1 CDS Rpic12D_3593 NC_012857.1 144929 146473 D TIGRFAM: nitrate reductase subunit beta; KEGG: rso:RSp0975 respiratory nitrate reductase oxidoreductase protein; nitrate reductase subunit beta 144929..146473 Ralstonia pickettii 12D 8021280 YP_002983526.1 CDS Rpic12D_3594 NC_012857.1 146491 147192 D TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: nitrate reductase subunit delta; KEGG: rso:RSp0976 respiratory nitrate reductase oxidoreductase protein; nitrate reductase molybdenum cofactor assembly chaperone 146491..147192 Ralstonia pickettii 12D 8021281 YP_002983527.1 CDS Rpic12D_3595 NC_012857.1 147189 147872 D KEGG: rso:RSp0977 respiratory nitrate reductase transmembrane protein; TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: nitrate reductase subunit gamma; respiratory nitrate reductase subunit gamma 147189..147872 Ralstonia pickettii 12D 8021282 YP_002983528.1 CDS Rpic12D_3596 NC_012857.1 147874 148395 D TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: rso:RSp0978 molybdopterin-guanine dinucleotide biosynthesis protein; molybdopterin-guanine dinucleotide biosynthesis protein B 147874..148395 Ralstonia pickettii 12D 8021283 YP_002983529.1 CDS Rpic12D_3597 NC_012857.1 148457 150412 D PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; GAF domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; GAF domain protein; KEGG: rso:RSp0979 transmembrane nitrate/nitrite sensor kinase transcription regulator protein; GAF sensor signal transduction histidine kinase 148457..150412 Ralstonia pickettii 12D 8021284 YP_002983530.1 CDS Rpic12D_3598 NC_012857.1 150440 151096 D PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; Bacterio-opsin activator HTH domain protein; SMART: response regulator receiver; regulatory protein LuxR; KEGG: rso:RSp0980 nitrate/nitrite response regulator transcription regulator protein; LuxR family transcriptional regulator 150440..151096 Ralstonia pickettii 12D 8021285 YP_002983531.1 CDS Rpic12D_3599 NC_012857.1 151306 152448 D PFAM: methyltransferase small; ribosomal L11 methyltransferase; KEGG: rso:RSc3159 hypothetical protein; methyltransferase small 151306..152448 Ralstonia pickettii 12D 8021286 YP_002983532.1 CDS Rpic12D_3600 NC_012857.1 152435 153703 R PFAM: HI0933 family protein; KEGG: rso:RSc3158 transmembrane protein; hypothetical protein complement(152435..153703) Ralstonia pickettii 12D 8021287 YP_002983533.1 CDS Rpic12D_3601 NC_012857.1 153923 154759 D KEGG: rso:RSc3157 hypothetical protein; hypothetical protein 153923..154759 Ralstonia pickettii 12D 8021288 YP_002983534.1 CDS Rpic12D_3602 NC_012857.1 154808 156280 R KEGG: bpy:Bphyt_4938 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(154808..156280) Ralstonia pickettii 12D 8021289 YP_002983535.1 CDS Rpic12D_3603 NC_012857.1 156843 159059 D PFAM: peptidase M1 membrane alanine aminopeptidase; KEGG: rso:RS00411 aminopeptidase transmembrane protein; peptidase M1 membrane alanine aminopeptidase 156843..159059 Ralstonia pickettii 12D 8021290 YP_002983536.1 CDS Rpic12D_3604 NC_012857.1 159176 159499 R PFAM: nitrogen regulatory protein P-II; KEGG: rso:RS00410 P-II-like protein transcription regulator; nitrogen regulatory protein P-II complement(159176..159499) Ralstonia pickettii 12D 8021291 YP_002983537.1 CDS Rpic12D_3605 NC_012857.1 159496 162645 R TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: rso:RS00409 cation efflux system transmembrane protein; CzcA family heavy metal efflux pump complement(159496..162645) Ralstonia pickettii 12D 8021292 YP_002983538.1 CDS Rpic12D_3606 NC_012857.1 162642 163862 R TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: rso:RS00408 cation efflux protein; RND family efflux transporter MFP subunit complement(162642..163862) Ralstonia pickettii 12D 8021293 YP_002983539.1 CDS Rpic12D_3607 NC_012857.1 163859 165205 R PFAM: outer membrane efflux protein; KEGG: rso:RS00407 outer membrane cation efflux system protein; outer membrane efflux protein complement(163859..165205) Ralstonia pickettii 12D 8021294 YP_002983540.1 CDS Rpic12D_3608 NC_012857.1 165319 165846 R KEGG: rso:RS00406 hypothetical protein; hypothetical protein complement(165319..165846) Ralstonia pickettii 12D 8021295 YP_002983541.1 CDS Rpic12D_3609 NC_012857.1 165898 167394 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rso:RS00403 transmembrane sensor histidine kinase transcription regulator protein; histidine kinase complement(165898..167394) Ralstonia pickettii 12D 8021296 YP_002983542.1 CDS Rpic12D_3610 NC_012857.1 167391 168056 R PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: rso:RS00402 two component response regulator transcription regulator protein; transcriptional regulator complement(167391..168056) Ralstonia pickettii 12D 8021297 YP_002983543.1 CDS Rpic12D_3611 NC_012857.1 168644 169660 D KEGG: rso:RS00398 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 168644..169660 Ralstonia pickettii 12D 8021298 YP_002983544.1 CDS Rpic12D_3612 NC_012857.1 169714 170838 D PFAM: MscS Mechanosensitive ion channel; KEGG: rso:RS00392 hypothetical protein; mechanosensitive ion channel MscS 169714..170838 Ralstonia pickettii 12D 8021299 YP_002983545.1 CDS Rpic12D_3613 NC_012857.1 170835 171719 R KEGG: rso:RS05802 transmembrane protein; transmembrane protein complement(170835..171719) Ralstonia pickettii 12D 8021300 YP_002983546.1 CDS Rpic12D_3614 NC_012857.1 171722 173440 R KEGG: rso:RS00391 hypothetical protein; hypothetical protein complement(171722..173440) Ralstonia pickettii 12D 8021301 YP_002983547.1 CDS Rpic12D_3615 NC_012857.1 173455 173904 R KEGG: rso:RS00390 signal peptide protein; signal peptide protein complement(173455..173904) Ralstonia pickettii 12D 8021302 YP_002983548.1 CDS Rpic12D_3616 NC_012857.1 173914 175176 R KEGG: rso:RSp0510 UDP-N-acetylglucosamine 2-epimerase protein; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase complement(173914..175176) Ralstonia pickettii 12D 8021303 YP_002983549.1 CDS Rpic12D_3617 NC_012857.1 175424 177148 R KEGG: rso:RS00388 signal peptide protein; signal peptide protein complement(175424..177148) Ralstonia pickettii 12D 8021304 YP_002983550.1 CDS nfrB NC_012857.1 177145 179256 R PFAM: general secretory system II protein E domain protein; KEGG: rso:RSp0508 bacteriophage N4 adsorption protein B; bacteriophage N4 adsorption protein B complement(177145..179256) Ralstonia pickettii 12D 8021305 YP_002983551.1 CDS Rpic12D_3619 NC_012857.1 179980 181806 R PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: rso:RSp0507 methyl-accepting chemotaxis I; methyl-accepting chemotaxis sensory transducer complement(179980..181806) Ralstonia pickettii 12D 8021306 YP_002983552.1 CDS Rpic12D_3620 NC_012857.1 181896 182606 R PFAM: 17 kDa surface antigen; KEGG: rso:RS00385 glycin-rich transmembrane protein; 17 kDa surface antigen complement(181896..182606) Ralstonia pickettii 12D 8021307 YP_002983553.1 CDS Rpic12D_3621 NC_012857.1 182862 183794 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: rso:RSp0505 2-hydroxyacid dehydrogenase; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 182862..183794 Ralstonia pickettii 12D 8021308 YP_002983554.1 CDS Rpic12D_3622 NC_012857.1 183836 185092 R PFAM: extracellular ligand-binding receptor; KEGG: rso:RSc1750 Leu/Ile/Val-binding precursor signal peptide protein; extracellular ligand-binding receptor complement(183836..185092) Ralstonia pickettii 12D 8021309 YP_002983555.1 CDS Rpic12D_3623 NC_012857.1 185345 185998 D PFAM: regulatory protein TetR; KEGG: dar:Daro_3251 regulatory protein, TetR; TetR family transcriptional regulator 185345..185998 Ralstonia pickettii 12D 8021310 YP_002983556.1 CDS Rpic12D_3624 NC_012857.1 186040 187833 D PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: bpy:Bphyt_3530 major facilitator superfamily MFS_1; major facilitator superfamily protein 186040..187833 Ralstonia pickettii 12D 8021311 YP_002983557.1 CDS Rpic12D_3626 NC_012857.1 188165 188527 R KEGG: cti:RALTA_A0217 hypothetical protein; hypothetical protein complement(188165..188527) Ralstonia pickettii 12D 8021313 YP_002983558.1 CDS Rpic12D_3627 NC_012857.1 188702 190225 R PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rso:RS00365 hypothetical protein; hypothetical protein complement(188702..190225) Ralstonia pickettii 12D 8021314 YP_002983559.1 CDS Rpic12D_3628 NC_012857.1 190405 191823 D PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: cti:RALTA_A0216 GntR family transcriptional regulator; C-term aminotransferase motif; GntR family transcriptional regulator 190405..191823 Ralstonia pickettii 12D 8021315 YP_002983560.1 CDS Rpic12D_3629 NC_012857.1 191906 192361 D KEGG: rso:RS00364 hypothetical protein; hypothetical protein 191906..192361 Ralstonia pickettii 12D 8021316 YP_002983561.1 CDS Rpic12D_3630 NC_012857.1 192466 193245 R PFAM: enoyl-CoA hydratase/isomerase; KEGG: bja:bll7955 enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase complement(192466..193245) Ralstonia pickettii 12D 8021317 YP_002983562.1 CDS Rpic12D_3631 NC_012857.1 193242 193676 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: reu:Reut_B4527 MarR family transcriptional regulator; MarR family transcriptional regulator complement(193242..193676) Ralstonia pickettii 12D 8021318 YP_002983563.1 CDS Rpic12D_3632 NC_012857.1 193673 194560 R KEGG: bac:BamMC406_4327 alpha/beta hydrolase; alpha/beta hydrolase complement(193673..194560) Ralstonia pickettii 12D 8021319 YP_002983564.1 CDS Rpic12D_3633 NC_012857.1 194677 195033 D PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: rso:RSc1960 transcriptional regulatory DNA-binding transcription regulator protein; ArsR family transcriptional regulator 194677..195033 Ralstonia pickettii 12D 8021320 YP_002983565.1 CDS Rpic12D_3634 NC_012857.1 195017 195970 D PFAM: activator of Hsp90 ATPase 1 family protein; KEGG: rso:RSc1959 hypothetical protein; activator of Hsp90 ATPase 1 family protein 195017..195970 Ralstonia pickettii 12D 8021321 YP_002983566.1 CDS Rpic12D_3635 NC_012857.1 196107 197228 R catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase complement(196107..197228) Ralstonia pickettii 12D 8021322 YP_002983567.1 CDS Rpic12D_3636 NC_012857.1 197589 198263 D PFAM: phosphoglycerate mutase; KEGG: bur:Bcep18194_B3039 phosphoglycerate/bisphosphoglycerate mutase; phosphoglycerate mutase 197589..198263 Ralstonia pickettii 12D 8021323 YP_002983568.1 CDS Rpic12D_3637 NC_012857.1 198327 199091 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: reu:Reut_C6406 short chain dehydrogenase; short chain dehydrogenase 198327..199091 Ralstonia pickettii 12D 8021324 YP_002983569.1 CDS Rpic12D_3638 NC_012857.1 199107 200081 D PFAM: beta-lactamase; KEGG: reh:H16_A0853 lactamase B; beta-lactamase 199107..200081 Ralstonia pickettii 12D 8021325 YP_002983570.1 CDS Rpic12D_3639 NC_012857.1 200194 200466 D KEGG: rso:RS00884 hypothetical protein; hypothetical protein 200194..200466 Ralstonia pickettii 12D 8021326 YP_002983571.1 CDS Rpic12D_3640 NC_012857.1 200687 201919 R PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSp0412 fosmidomycin resistance antibiotic resistance transmembrane protein; major facilitator superfamily protein complement(200687..201919) Ralstonia pickettii 12D 8021327 YP_002983572.1 CDS Rpic12D_3641 NC_012857.1 202356 202574 D KEGG: rso:RS05307 hypothetical protein; hypothetical protein 202356..202574 Ralstonia pickettii 12D 8021328 YP_002983573.1 CDS Rpic12D_3642 NC_012857.1 202640 203665 R KEGG: rso:RS00868 hypothetical protein; hypothetical protein complement(202640..203665) Ralstonia pickettii 12D 8021329 YP_002983574.1 CDS Rpic12D_3643 NC_012857.1 203662 204234 R PFAM: protein of unknown function DUF1345; KEGG: rso:RS00867 hypothetical protein; hypothetical protein complement(203662..204234) Ralstonia pickettii 12D 8021330 YP_002983575.1 CDS Rpic12D_3644 NC_012857.1 204405 204710 R KEGG: rso:RS00866 hypothetical protein; hypothetical protein complement(204405..204710) Ralstonia pickettii 12D 8021331 YP_002983576.1 CDS Rpic12D_3645 NC_012857.1 204836 205258 R KEGG: rso:RS00831 signal peptide protein; signal peptide protein complement(204836..205258) Ralstonia pickettii 12D 8021332 YP_002983577.1 CDS Rpic12D_3646 NC_012857.1 205671 205838 D KEGG: rso:RS00829 lipoprotein; lipoprotein 205671..205838 Ralstonia pickettii 12D 8021333 YP_002983578.1 CDS Rpic12D_3647 NC_012857.1 205849 206397 R PFAM: GCN5-related N-acetyltransferase; KEGG: rso:RSp0397 phosphinothricin acetyltransferase protein; N-acetyltransferase GCN5 complement(205849..206397) Ralstonia pickettii 12D 8021334 YP_002983579.1 CDS Rpic12D_3648 NC_012857.1 206570 207547 D SMART: rhodanese; KEGG: rso:RS00824 hypothetical protein; rhodanese 206570..207547 Ralstonia pickettii 12D 8021335 YP_002983580.1 CDS Rpic12D_3649 NC_012857.1 207890 209467 R PFAM: flagellar hook-length control protein; KEGG: rso:RSp0395 flagellar hook-length control protein; flagellar hook-length control protein complement(207890..209467) Ralstonia pickettii 12D 8021336 YP_002983581.1 CDS Rpic12D_3650 NC_012857.1 209503 209967 R TIGRFAM: flagellar export protein FliJ; PFAM: flagellar FliJ protein; KEGG: rso:RSp0394 flagellar protein; flagellar export protein FliJ complement(209503..209967) Ralstonia pickettii 12D 8021337 YP_002983582.1 CDS Rpic12D_3651 NC_012857.1 210076 211515 R KEGG: rso:RSp0393 flagellum-specific ATP synthase; TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/subunit beta central region; H+transporting two-sector ATPase alpha/subunit beta domain protein; SMART: ATPase AAA; FliI/YscN family ATPase complement(210076..211515) Ralstonia pickettii 12D 8021338 YP_002983583.1 CDS fliH NC_012857.1 211505 212242 R binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H complement(211505..212242) Ralstonia pickettii 12D 8021339 YP_002983584.1 CDS fliG NC_012857.1 212275 213267 R One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G complement(212275..213267) Ralstonia pickettii 12D 8021340 YP_002983585.1 CDS Rpic12D_3654 NC_012857.1 213264 215099 R TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; flagellar M-ring domain protein; KEGG: rso:RSp0390 flagellar M-ring transmembrane protein; flagellar M-ring protein FliF complement(213264..215099) Ralstonia pickettii 12D 8021341 YP_002983586.1 CDS fliE NC_012857.1 215343 215678 D forms a junction between the M-ring and FlgB during flagella biosynthesis; flagellar hook-basal body protein FliE 215343..215678 Ralstonia pickettii 12D 8021342 YP_002983587.1 CDS Rpic12D_3656 NC_012857.1 215742 216842 D PFAM: glycosyl transferase family 2; KEGG: rso:RS00815 hypothetical protein; family 2 glycosyl transferase 215742..216842 Ralstonia pickettii 12D 8021343 YP_002983588.1 CDS Rpic12D_3657 NC_012857.1 216853 217626 D TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: nucleotidyl transferase; KEGG: cti:RALTA_B2136 glucose-1-phosphate cytidylyltransferase (CDP-glucose pyrophosphorylase); glucose-1-phosphate cytidylyltransferase 216853..217626 Ralstonia pickettii 12D 8021344 YP_002983589.1 CDS Rpic12D_3658 NC_012857.1 217626 218717 D TIGRFAM: CDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; KEGG: cti:RALTA_B2137 CDP-glucose 4,6-dehydratase; CDP-glucose 4,6-dehydratase 217626..218717 Ralstonia pickettii 12D 8021345 YP_002983590.1 CDS Rpic12D_3659 NC_012857.1 218714 219307 D KEGG: dol:Dole_1961 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; dTDP-4-dehydrorhamnose 3,5-epimerase 218714..219307 Ralstonia pickettii 12D 8021346 YP_002983591.1 CDS Rpic12D_3660 NC_012857.1 219304 220455 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: rlt:Rleg2_4213 glutamine--scyllo-inositol transaminase; glutamine--scyllo-inositol transaminase 219304..220455 Ralstonia pickettii 12D 8021347 YP_002983592.1 CDS Rpic12D_3661 NC_012857.1 220440 221282 D PFAM: phytanoyl-CoA dioxygenase; KEGG: azc:AZC_3474 phytanoil-CoA alpha hydroxylase; phytanoyl-CoA dioxygenase 220440..221282 Ralstonia pickettii 12D 8021348 YP_002983593.1 CDS Rpic12D_3662 NC_012857.1 221285 222460 D PFAM: methyltransferase type 12; methyltransferase type 11; KEGG: azc:AZC_3475 hypothetical protein; type 12 methyltransferase 221285..222460 Ralstonia pickettii 12D 8021349 YP_002983594.1 CDS Rpic12D_3663 NC_012857.1 222457 222972 D PFAM: GCN5-related N-acetyltransferase; KEGG: azc:AZC_3472 acetyltransferase; N-acetyltransferase GCN5 222457..222972 Ralstonia pickettii 12D 8021350 YP_002983595.1 CDS Rpic12D_3664 NC_012857.1 222969 223682 D PFAM: WbqC-like family protein; KEGG: azc:AZC_3473 hypothetical protein; WbqC-like family protein 222969..223682 Ralstonia pickettii 12D 8021351 YP_002983596.1 CDS Rpic12D_3665 NC_012857.1 223679 224953 D PFAM: glycosyl transferase family 2; KEGG: azc:AZC_3476 glycosyltransferase; family 2 glycosyl transferase 223679..224953 Ralstonia pickettii 12D 8021352 YP_002983597.1 CDS fliE NC_012857.1 224972 225298 D forms a junction between the M-ring and FlgB during flagella biosynthesis; flagellar hook-basal body protein FliE 224972..225298 Ralstonia pickettii 12D 8021353 YP_002983598.1 CDS Rpic12D_3667 NC_012857.1 225441 225863 D PFAM: OsmC family protein; KEGG: rru:Rru_A0476 OsmC-like protein; OsmC family protein 225441..225863 Ralstonia pickettii 12D 8021354 YP_002983599.1 CDS Rpic12D_3668 NC_012857.1 225929 226372 D PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rso:RS00814 transcription regulator protein; MarR family transcriptional regulator 225929..226372 Ralstonia pickettii 12D 8021355 YP_002983600.1 CDS Rpic12D_3669 NC_012857.1 226359 227453 D PFAM: glycosyl transferase family 2; KEGG: rso:RS00815 hypothetical protein; family 2 glycosyl transferase 226359..227453 Ralstonia pickettii 12D 8021356 YP_002983601.1 CDS Rpic12D_3670 NC_012857.1 227464 227820 R KEGG: rso:RSp0385 flagellar protein FliT; flagellar protein FliT complement(227464..227820) Ralstonia pickettii 12D 8021357 YP_002983602.1 CDS Rpic12D_3671 NC_012857.1 227876 228298 R TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS; KEGG: rso:RSp0384 flagellar protein FliS; flagellar protein FliS complement(227876..228298) Ralstonia pickettii 12D 8021358 YP_002983603.1 CDS Rpic12D_3672 NC_012857.1 228349 230391 R PFAM: flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; flagellar hook-associated protein 2 domain protein; KEGG: rso:RSp0383 flagellar hook-associated protein 2; flagellar hook-associated 2 domain-containing protein complement(228349..230391) Ralstonia pickettii 12D 8021359 YP_002983604.1 CDS Rpic12D_3673 NC_012857.1 230578 231399 R PFAM: flagellin domain protein; KEGG: rso:RSp0382 flagellin protein; flagellin domain-containing protein complement(230578..231399) Ralstonia pickettii 12D 8021360 YP_002983605.1 CDS Rpic12D_3674 NC_012857.1 231798 232433 D PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; response regulator receiver; KEGG: rso:RS00809 transcription regulator protein; LuxR family transcriptional regulator 231798..232433 Ralstonia pickettii 12D 8021361 YP_002983606.1 CDS Rpic12D_3675 NC_012857.1 232434 234392 R KEGG: rso:RS00808 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; hypothetical protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(232434..234392) Ralstonia pickettii 12D 8021362 YP_002983607.1 CDS fliL NC_012857.1 234668 235162 D interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL 234668..235162 Ralstonia pickettii 12D 8021363 YP_002983608.1 CDS fliM NC_012857.1 235164 236171 D with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM 235164..236171 Ralstonia pickettii 12D 8021364 YP_002983609.1 CDS Rpic12D_3678 NC_012857.1 236161 236613 D TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: rso:RSp0377 flagellar motor switch protein FliN; flagellar motor switch protein FliN 236161..236613 Ralstonia pickettii 12D 8021365 YP_002983610.1 CDS Rpic12D_3679 NC_012857.1 236673 237056 D PFAM: flagellar biosynthesis protein FliO; KEGG: rso:RSp0376 flagellar FliO transmembrane protein; flagellar biosynthesis protein FliO 236673..237056 Ralstonia pickettii 12D 8021366 YP_002983611.1 CDS fliP NC_012857.1 237053 237802 D FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 237053..237802 Ralstonia pickettii 12D 8021367 YP_002983612.1 CDS fliQ NC_012857.1 237812 238081 D with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliQ 237812..238081 Ralstonia pickettii 12D 8021368 YP_002983613.1 CDS Rpic12D_3682 NC_012857.1 238115 238903 D TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: rso:RSp0373 flagellar biosynthetic FliR transmembrane protein; flagellar biosynthetic protein FliR 238115..238903 Ralstonia pickettii 12D 8021369 YP_002983614.1 CDS Rpic12D_3683 NC_012857.1 239420 240022 D KEGG: rso:RS00799 hypothetical protein; hypothetical protein 239420..240022 Ralstonia pickettii 12D 8021370 YP_002983615.1 CDS Rpic12D_3684 NC_012857.1 240007 240813 D PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: rso:RS00796 1-acyl-sn-glycerol-3-phosphate acyltransferase alpha transmembrane protein; phospholipid/glycerol acyltransferase 240007..240813 Ralstonia pickettii 12D 8021371 YP_002983616.1 CDS Rpic12D_3685 NC_012857.1 240788 241045 D KEGG: bph:Bphy_0691 acyl-carrier protein; acyl-carrier protein 240788..241045 Ralstonia pickettii 12D 8021372 YP_002983617.1 CDS Rpic12D_3686 NC_012857.1 241091 241336 D carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 241091..241336 Ralstonia pickettii 12D 8021373 YP_002983618.1 CDS Rpic12D_3687 NC_012857.1 241341 241979 D KEGG: rso:RS00790 hypothetical protein; hypothetical protein 241341..241979 Ralstonia pickettii 12D 8021374 YP_002983619.1 CDS Rpic12D_3688 NC_012857.1 241976 243649 D PFAM: AMP-dependent synthetase and ligase; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: rso:RS00787 hypothetical protein; AMP-dependent synthetase and ligase 241976..243649 Ralstonia pickettii 12D 8021375 YP_002983620.1 CDS Rpic12D_3689 NC_012857.1 243646 245367 D PFAM: glycosyl transferase family 2; KEGG: rso:RS00785 hypothetical protein; family 2 glycosyl transferase 243646..245367 Ralstonia pickettii 12D 8021376 YP_002983621.1 CDS Rpic12D_3690 NC_012857.1 245360 246958 D PFAM: phenylalanine/histidine ammonia-lyase; KEGG: rso:RSp0365 histidine ammonia-lyase protein; histidine ammonia-lyase 245360..246958 Ralstonia pickettii 12D 8021377 YP_002983622.1 CDS Rpic12D_3691 NC_012857.1 246945 247379 D PFAM: thioesterase superfamily protein; KEGG: rso:RS00778 hypothetical protein; thioesterase superfamily protein 246945..247379 Ralstonia pickettii 12D 8021378 YP_002983623.1 CDS Rpic12D_3692 NC_012857.1 247367 248023 D KEGG: rso:RS00776 signal peptide protein; signal peptide protein 247367..248023 Ralstonia pickettii 12D 8021379 YP_002983624.1 CDS Rpic12D_3693 NC_012857.1 248020 250428 D KEGG: rso:RS00775 lipoprotein transmembrane; lipoprotein transmembrane 248020..250428 Ralstonia pickettii 12D 8021380 YP_002983625.1 CDS Rpic12D_3694 NC_012857.1 250425 251606 D FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 250425..251606 Ralstonia pickettii 12D 8021381 YP_002983626.1 CDS Rpic12D_3695 NC_012857.1 251609 252082 D PFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: rso:RS00772 hypothetical protein; 3-hydroxyacyl-ACP dehydratase 251609..252082 Ralstonia pickettii 12D 8021382 YP_002983627.1 CDS fabG NC_012857.1 252079 252807 D Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 252079..252807 Ralstonia pickettii 12D 8021383 YP_002983628.1 CDS Rpic12D_3697 NC_012857.1 252807 254033 D FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II 252807..254033 Ralstonia pickettii 12D 8021384 YP_002983629.1 CDS Rpic12D_3698 NC_012857.1 254033 255331 D PFAM: beta-ketoacyl synthase; KEGG: rso:RSp0357 3-oxoacyl-[acyl-carrier-protein] synthase I; beta-ketoacyl synthase 254033..255331 Ralstonia pickettii 12D 8021385 YP_002983630.1 CDS Rpic12D_3699 NC_012857.1 255328 255762 D KEGG: rso:RS00762 signal peptide protein; signal peptide protein 255328..255762 Ralstonia pickettii 12D 8021386 YP_002983631.1 CDS Rpic12D_3700 NC_012857.1 255820 256254 D KEGG: bph:Bphy_0706 excinuclease, ATPase subunit; excinuclease ATPase subunit 255820..256254 Ralstonia pickettii 12D 8021387 YP_002983632.1 CDS Rpic12D_3701 NC_012857.1 256299 257027 R PFAM: methyltransferase type 11; UbiE/COQ5 methyltransferase; methyltransferase type 12; methyltransferase; KEGG: rso:RS00761 hypothetical protein; type 11 methyltransferase complement(256299..257027) Ralstonia pickettii 12D 8021388 YP_002983633.1 CDS Rpic12D_3702 NC_012857.1 257179 258438 D PFAM: monooxygenase FAD-binding; tryptophan halogenase; FAD dependent oxidoreductase; KEGG: rso:RS00759 oxidoreductase protein; FAD-binding monooxygenase 257179..258438 Ralstonia pickettii 12D 8021389 YP_002983634.1 CDS Rpic12D_3703 NC_012857.1 258486 259229 R PFAM: protein of unknown function DUF1275; KEGG: rso:RS00757 hypothetical protein; hypothetical protein complement(258486..259229) Ralstonia pickettii 12D 8021390 YP_002983635.1 CDS Rpic12D_3704 NC_012857.1 259292 260251 R TIGRFAM: flagellar hook-associated protein 3; KEGG: rso:RSp0352 flagellar hook-associated protein 3; flagellar hook-associated protein 3 complement(259292..260251) Ralstonia pickettii 12D 8021391 YP_002983636.1 CDS flgK NC_012857.1 260319 262256 R with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK complement(260319..262256) Ralstonia pickettii 12D 8021392 YP_002983637.1 CDS Rpic12D_3706 NC_012857.1 262372 263457 R KEGG: rso:RSp0350 flagellar protein FlgJ; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2; flagellar rod assembly protein/muramidase FlgJ complement(262372..263457) Ralstonia pickettii 12D 8021393 YP_002983638.1 CDS flgI NC_012857.1 263474 264592 R part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein complement(263474..264592) Ralstonia pickettii 12D 8021394 YP_002983639.1 CDS Rpic12D_3708 NC_012857.1 264603 265346 R PFAM: flagellar L-ring protein; KEGG: rso:RSp0348 flagellar L-ring protein precursor; flagellar L-ring protein complement(264603..265346) Ralstonia pickettii 12D 8021395 YP_002983640.1 CDS Rpic12D_3709 NC_012857.1 265380 266162 R TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: rso:RSp0347 flagellar basal-body rod protein FlgG; flagellar basal-body rod protein FlgG complement(265380..266162) Ralstonia pickettii 12D 8021396 YP_002983641.1 CDS Rpic12D_3710 NC_012857.1 266199 266936 R TIGRFAM: flagellar basal-body rod protein FlgF; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: rso:RSp0346 flagellar basal-body rod protein FlgF; flagellar basal-body rod protein FlgF complement(266199..266936) Ralstonia pickettii 12D 8021397 YP_002983642.1 CDS flgE NC_012857.1 266966 268174 R the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE complement(266966..268174) Ralstonia pickettii 12D 8021398 YP_002983643.1 CDS Rpic12D_3712 NC_012857.1 268214 268861 R PFAM: flagellar hook capping protein; KEGG: rso:RSp0344 basal-body rod modification protein FlgD; flagellar hook capping protein complement(268214..268861) Ralstonia pickettii 12D 8021399 YP_002983644.1 CDS Rpic12D_3713 NC_012857.1 268899 269306 R TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: rso:RSp0343 flagellar basal-body rod protein FlgC; flagellar basal-body rod protein FlgC complement(268899..269306) Ralstonia pickettii 12D 8021400 YP_002983645.1 CDS Rpic12D_3714 NC_012857.1 269464 269919 R TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein; KEGG: rso:RSp0342 flagellar basal-body rod protein FlgB; flagellar basal-body rod protein FlgB complement(269464..269919) Ralstonia pickettii 12D 8021401 YP_002983646.1 CDS flgA NC_012857.1 270315 271190 D required for the assembly of the flagellar basal body P-ring; flagellar basal body P-ring biosynthesis protein FlgA 270315..271190 Ralstonia pickettii 12D 8021402 YP_002983647.1 CDS Rpic12D_3716 NC_012857.1 271302 271622 D PFAM: anti-sigma-28 factor FlgM family protein; KEGG: rso:RSp0340 negative regulator of flagellin synthesis (anti-sigma-28 factor) protein; anti-sigma-28 factor FlgM 271302..271622 Ralstonia pickettii 12D 8021403 YP_002983648.1 CDS Rpic12D_3717 NC_012857.1 271744 272205 D PFAM: FlgN family protein; KEGG: rso:RSp0339 flagella synthesis protein FlgN; FlgN family protein 271744..272205 Ralstonia pickettii 12D 8021404 YP_002983649.1 CDS Rpic12D_3718 NC_012857.1 272659 273354 D PFAM: regulatory protein LuxR; LexA DNA-binding domain protein; SMART: regulatory protein LuxR; KEGG: rso:RSp0338 negative regulator of exopolysaccharide production transcription regulator protein; LuxR family transcriptional regulator 272659..273354 Ralstonia pickettii 12D 8021405 YP_002983650.1 CDS Rpic12D_3719 NC_012857.1 273467 274525 R PFAM: porin Gram-negative type; KEGG: rso:RS00714 porin precursor transmembrane protein; porin complement(273467..274525) Ralstonia pickettii 12D 8021406 YP_002983651.1 CDS Rpic12D_3720 NC_012857.1 274786 275514 R PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: rso:RS00713 transcription regulator protein; GntR family transcriptional regulator complement(274786..275514) Ralstonia pickettii 12D 8021407 YP_002983652.1 CDS Rpic12D_3721 NC_012857.1 275636 275926 R PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS; KEGG: rso:RS00711 HNS-like transcription regulator protein; histone family protein nucleoid-structuring protein H-NS complement(275636..275926) Ralstonia pickettii 12D 8021408 YP_002983653.1 CDS Rpic12D_3722 NC_012857.1 276861 279515 D KEGG: rso:RS00710 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; hypothetical protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 276861..279515 Ralstonia pickettii 12D 8021409 YP_002983654.1 CDS Rpic12D_3723 NC_012857.1 279561 279764 R KEGG: rso:RSp0333 osmotically inducible lipoprotein B2 transmembrane; osmotically inducible lipoprotein B2 transmembrane complement(279561..279764) Ralstonia pickettii 12D 8021410 YP_002983655.1 CDS Rpic12D_3724 NC_012857.1 280242 281828 R Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates; isocitrate lyase complement(280242..281828) Ralstonia pickettii 12D 8021411 YP_002983656.1 CDS Rpic12D_3725 NC_012857.1 282337 282933 R KEGG: rso:RS05439 hypothetical protein; hypothetical protein complement(282337..282933) Ralstonia pickettii 12D 8021412 YP_002983657.1 CDS Rpic12D_3726 NC_012857.1 282933 283367 R PFAM: OsmC family protein; KEGG: rso:RS05440 organic hydroperoxide resistance protein; OsmC family protein complement(282933..283367) Ralstonia pickettii 12D 8021413 YP_002983658.1 CDS Rpic12D_3727 NC_012857.1 283487 285730 R PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: rso:RS05441 dehydrogenase, large chain oxidoreductase protein; molybdopterin binding aldehyde oxidase and xanthine dehydrogenase complement(283487..285730) Ralstonia pickettii 12D 8021414 YP_002983659.1 CDS Rpic12D_3728 NC_012857.1 285750 286208 R PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: rso:RS05442 dehydrogenase, small chain oxidoreductase protein; (2Fe-2S)-binding domain-containing protein complement(285750..286208) Ralstonia pickettii 12D 8021415 YP_002983660.1 CDS Rpic12D_3729 NC_012857.1 286854 288566 D TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: rso:RSp0322 2-isopropylmalate synthase; 2-isopropylmalate synthase 286854..288566 Ralstonia pickettii 12D 8021416 YP_002983661.1 CDS Rpic12D_3730 NC_012857.1 288694 289080 D PFAM: protein of unknown function DUF326; KEGG: rso:RS05446 hypothetical protein; hypothetical protein 288694..289080 Ralstonia pickettii 12D 8021417 YP_002983662.1 CDS Rpic12D_3731 NC_012857.1 289098 289580 D KEGG: rso:RS05447 transcription regulator protein; TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR; MerR family transcriptional regulator 289098..289580 Ralstonia pickettii 12D 8021418 YP_002983663.1 CDS Rpic12D_3732 NC_012857.1 289632 291983 R TIGRFAM: ATPase P; ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: rso:RS05448 metal-transporting P-type ATPase transmembrane protein; ATPase P complement(289632..291983) Ralstonia pickettii 12D 8021419 YP_002983664.1 CDS Rpic12D_3733 NC_012857.1 292035 292583 R PFAM: protein of unknown function DUF1234; KEGG: aav:Aave_0055 protein of unknown function DUF1234; hypothetical protein complement(292035..292583) Ralstonia pickettii 12D 8021420 YP_002983665.1 CDS Rpic12D_3734 NC_012857.1 292773 294071 D TIGRFAM: citrate/H+ symporter, CitMHS family; PFAM: citrate transporter; C4-dicarboxylate anaerobic carrier; TRAP C4-dicarboxylate transporter permease DctM subunit; KEGG: bpy:Bphyt_4090 citrate/H+ symporter, CitMHS family; CitMHS family citrate/H+ symporter 292773..294071 Ralstonia pickettii 12D 8021421 YP_002983666.1 CDS Rpic12D_3735 NC_012857.1 294076 295431 D PFAM: protein of unknown function DUF1446; KEGG: mrd:Mrad2831_4048 hypothetical protein; hypothetical protein 294076..295431 Ralstonia pickettii 12D 8021422 YP_002983667.1 CDS Rpic12D_3736 NC_012857.1 295433 295753 D KEGG: met:M446_5609 hypothetical protein; hypothetical protein 295433..295753 Ralstonia pickettii 12D 8021423 YP_002983668.1 CDS Rpic12D_3737 NC_012857.1 295780 296679 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rme:Rmet_5879 LysR family transcriptional regulator; LysR family transcriptional regulator 295780..296679 Ralstonia pickettii 12D 8021424 YP_002983669.1 CDS Rpic12D_3738 NC_012857.1 296770 297237 D PFAM: UspA domain protein; KEGG: rso:RS05449 hypothetical protein; UspA domain-containing protein 296770..297237 Ralstonia pickettii 12D 8021425 YP_002983670.1 CDS Rpic12D_3739 NC_012857.1 297353 297796 D PFAM: protein of unknown function DUF1486; KEGG: rso:RS05451 hypothetical protein; hypothetical protein 297353..297796 Ralstonia pickettii 12D 8021426 YP_002983671.1 CDS Rpic12D_3740 NC_012857.1 297851 298855 D PFAM: 2-nitropropane dioxygenase NPD; KEGG: rso:RS05452 transmembrane protein; 2-nitropropane dioxygenase 297851..298855 Ralstonia pickettii 12D 8021427 YP_002983672.1 CDS Rpic12D_3741 NC_012857.1 298860 299399 R PFAM: transcriptional regulator PadR family protein; KEGG: rso:RS05461 hypothetical protein; PadR family transcriptional regulator complement(298860..299399) Ralstonia pickettii 12D 8021428 YP_002983673.1 CDS Rpic12D_3742 NC_012857.1 299823 300245 R KEGG: azo:azo2559 conserved hypothetical secreted protein; hypothetical protein complement(299823..300245) Ralstonia pickettii 12D 8021429 YP_002983674.1 CDS Rpic12D_3743 NC_012857.1 300444 301706 R PFAM: beta-lactamase; KEGG: rme:Rmet_5786 beta-lactamase; beta-lactamase complement(300444..301706) Ralstonia pickettii 12D 8021430 YP_002983675.1 CDS Rpic12D_3744 NC_012857.1 302045 302962 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RS05463 transcription regulator protein; LysR family transcriptional regulator 302045..302962 Ralstonia pickettii 12D 8021431 YP_002983676.1 CDS Rpic12D_3745 NC_012857.1 303196 304266 R PFAM: 2-nitropropane dioxygenase NPD; KEGG: rso:RS05464 oxidoreductase protein; 2-nitropropane dioxygenase complement(303196..304266) Ralstonia pickettii 12D 8021432 YP_002983677.1 CDS Rpic12D_3746 NC_012857.1 304416 304994 D PFAM: protein of unknown function DUF1470; KEGG: rso:RS05465 hypothetical protein; hypothetical protein 304416..304994 Ralstonia pickettii 12D 8021433 YP_002983678.1 CDS Rpic12D_3747 NC_012857.1 305103 305867 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: rso:RS05466 dehydrogenase oxidoreductase protein; short-chain dehydrogenase/reductase SDR 305103..305867 Ralstonia pickettii 12D 8021434 YP_002983679.1 CDS Rpic12D_3748 NC_012857.1 306092 307351 R PFAM: major facilitator superfamily MFS_1; KEGG: bpy:Bphyt_0628 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(306092..307351) Ralstonia pickettii 12D 8021435 YP_002983680.1 CDS Rpic12D_3749 NC_012857.1 307441 308403 D PFAM: ThiJ/PfpI domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_A4475 transcriptional regulator; AraC family transcriptional regulator 307441..308403 Ralstonia pickettii 12D 8021436 YP_002983681.1 CDS Rpic12D_3750 NC_012857.1 308497 309162 D PFAM: glutathione S-transferase domain; KEGG: rso:RS04766 hypothetical protein; glutathione S-transferase domain-containing protein 308497..309162 Ralstonia pickettii 12D 8021437 YP_002983682.1 CDS Rpic12D_3751 NC_012857.1 309183 310043 D TIGRFAM: methyltransferase; KEGG: bcm:Bcenmc03_5616 methyltransferase; methyltransferase 309183..310043 Ralstonia pickettii 12D 8021438 YP_002983683.1 CDS Rpic12D_3752 NC_012857.1 310057 310389 R KEGG: reu:Reut_A1768 hypothetical protein; hypothetical protein complement(310057..310389) Ralstonia pickettii 12D 8021439 YP_002983684.1 CDS Rpic12D_3753 NC_012857.1 310545 310934 R KEGG: bph:Bphy_7087 transmembrane protein; transmembrane protein complement(310545..310934) Ralstonia pickettii 12D 8021440 YP_002983685.1 CDS Rpic12D_3754 NC_012857.1 311024 311389 R PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: bxe:Bxe_B3007 response regulator receiver protein; response regulator receiver protein complement(311024..311389) Ralstonia pickettii 12D 8021441 YP_002983686.1 CDS Rpic12D_3755 NC_012857.1 311410 311943 R KEGG: bxe:Bxe_B3009 hypothetical protein; hypothetical protein complement(311410..311943) Ralstonia pickettii 12D 8021442 YP_002983687.1 CDS Rpic12D_3756 NC_012857.1 311940 312674 R PFAM: chemotaxis sensory transducer; KEGG: bpy:Bphyt_6985 methyl-accepting chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer complement(311940..312674) Ralstonia pickettii 12D 8021443 YP_002983688.1 CDS Rpic12D_3757 NC_012857.1 312674 315058 R PFAM: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; PAC repeat-containing protein; KEGG: bpy:Bphyt_6986 CheA signal transduction histidine kinase; CheA signal transduction histidine kinase complement(312674..315058) Ralstonia pickettii 12D 8021444 YP_002983689.1 CDS Rpic12D_3758 NC_012857.1 315527 315922 D PFAM: Domain of unknown function DUF1801; KEGG: rme:Rmet_1765 hypothetical protein; hypothetical protein 315527..315922 Ralstonia pickettii 12D 8021445 YP_002983690.1 CDS Rpic12D_3759 NC_012857.1 316009 316341 D KEGG: bte:BTH_II1151 hypothetical protein; hypothetical protein 316009..316341 Ralstonia pickettii 12D 8021446 YP_002983691.1 CDS Rpic12D_3760 NC_012857.1 316387 316935 R PFAM: GCN5-related N-acetyltransferase; KEGG: rso:RSc3133 antibiotic resistance (acetyltransferase) protein; N-acetyltransferase GCN5 complement(316387..316935) Ralstonia pickettii 12D 8021447 YP_002983692.1 CDS Rpic12D_3761 NC_012857.1 317121 322037 D PFAM: NAD-glutamate dehydrogenase; KEGG: pol:Bpro_3020 glutamate dehydrogenase (NAD); NAD-glutamate dehydrogenase 317121..322037 Ralstonia pickettii 12D 8021448 YP_002983693.1 CDS Rpic12D_3762 NC_012857.1 322113 322364 R KEGG: reu:Reut_B5133 hypothetical protein; hypothetical protein complement(322113..322364) Ralstonia pickettii 12D 8021449 YP_002983694.1 CDS Rpic12D_3763 NC_012857.1 322759 323739 R KEGG: rso:RS03675 hypothetical protein; hypothetical protein complement(322759..323739) Ralstonia pickettii 12D 8021450 YP_002983695.1 CDS Rpic12D_3764 NC_012857.1 323736 325013 R predicted polysaccharide polymerase involved in biofilm formation; required for the synthesis of the beta-1,6-N-acetylglucosamine polysaccharide; PgaC; in Yersinia the HmsR protein is an inner membrane protein; N-glycosyltransferase complement(323736..325013) Ralstonia pickettii 12D 8021451 YP_002983696.1 CDS Rpic12D_3765 NC_012857.1 325015 327153 R PFAM: polysaccharide deacetylase; KEGG: rso:RSp0287 hemin storage signal peptide protein; polysaccharide deacetylase complement(325015..327153) Ralstonia pickettii 12D 8021452 YP_002983697.1 CDS Rpic12D_3766 NC_012857.1 327204 329669 R KEGG: rso:RSp0286 hemin-binding outer membrane transmembrane protein; hemin-binding outer membrane transmembrane protein complement(327204..329669) Ralstonia pickettii 12D 8021453 YP_002983698.1 CDS Rpic12D_3767 NC_012857.1 329745 330656 R PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: rso:RS03679 transcription regulator protein; LuxR family transcriptional regulator complement(329745..330656) Ralstonia pickettii 12D 8021454 YP_002983699.1 CDS Rpic12D_3768 NC_012857.1 331202 331360 R KEGG: rso:RS03680 hypothetical protein; hypothetical protein complement(331202..331360) Ralstonia pickettii 12D 8021455 YP_002983700.1 CDS Rpic12D_3769 NC_012857.1 331586 332581 R PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; short-chain dehydrogenase/reductase SDR; KEGG: pol:Bpro_4367 L-threonine 3-dehydrogenase; NAD-dependent epimerase/dehydratase complement(331586..332581) Ralstonia pickettii 12D 8021456 YP_002983701.1 CDS Rpic12D_3770 NC_012857.1 332581 333810 R catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate coenzyme A ligase complement(332581..333810) Ralstonia pickettii 12D 8021457 YP_002983702.1 CDS Rpic12D_3771 NC_012857.1 333898 334494 D PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: rme:Rmet_4806 transcriptional regulator, XRE family; XRE family transcriptional regulator 333898..334494 Ralstonia pickettii 12D 8021458 YP_002983703.1 CDS Rpic12D_3772 NC_012857.1 334500 335852 R TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: rso:RSp0283 DNA-damage-inducible F transmembrane protein; MATE efflux family protein complement(334500..335852) Ralstonia pickettii 12D 8021459 YP_002983704.1 CDS Rpic12D_3773 NC_012857.1 336213 337847 D PFAM: amino acid permease-associated region; KEGG: rso:RS03682 amino-acid permease transmembrane protein; amino acid permease-associated protein 336213..337847 Ralstonia pickettii 12D 8021460 YP_002983705.1 CDS Rpic12D_3774 NC_012857.1 338111 339013 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bac:BamMC406_6037 LysR family transcriptional regulator; LysR family transcriptional regulator complement(338111..339013) Ralstonia pickettii 12D 8021461 YP_002983706.1 CDS Rpic12D_3775 NC_012857.1 339116 340000 D PFAM: aldo/keto reductase; KEGG: bvi:Bcep1808_6440 oxidoreductase; oxidoreductase 339116..340000 Ralstonia pickettii 12D 8021462 YP_002983707.1 CDS Rpic12D_3776 NC_012857.1 340115 340360 R PFAM: Albicidin resistance; KEGG: spe:Spro_1357 MerR family transcriptional regulator; Albicidin resistance complement(340115..340360) Ralstonia pickettii 12D 8021463 YP_002983708.1 CDS Rpic12D_3777 NC_012857.1 340655 342439 D KEGG: reh:H16_B1253 predicted signal transduction protein containingan EAL and a GGDEF domain; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase 340655..342439 Ralstonia pickettii 12D 8021464 YP_002983709.1 CDS Rpic12D_3778 NC_012857.1 342980 344398 D PFAM: coagulation factor 5/8 type domain protein; WD40 domain protein beta Propeller; KEGG: rso:RS03685 signal peptide protein; coagulation factor 5/8 type domain-containing protein 342980..344398 Ralstonia pickettii 12D 8021465 YP_002983710.1 CDS Rpic12D_3779 NC_012857.1 344571 346238 D hypothetical protein 344571..346238 Ralstonia pickettii 12D 8021466 YP_002983711.1 CDS Rpic12D_3780 NC_012857.1 346261 347274 D catalyzes the formation of 2-dehydropantoate from (R)-pantoate; 2-dehydropantoate 2-reductase 346261..347274 Ralstonia pickettii 12D 8021467 YP_002983712.1 CDS Rpic12D_3781 NC_012857.1 347271 347963 R PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: reh:H16_B1400 transcriptional regulator CRP family; Crp/Fnr family transcriptional regulator complement(347271..347963) Ralstonia pickettii 12D 8021468 YP_002983713.1 CDS Rpic12D_3782 NC_012857.1 348128 348640 R KEGG: rso:RS02107 hypothetical protein; hypothetical protein complement(348128..348640) Ralstonia pickettii 12D 8021469 YP_002983714.1 CDS Rpic12D_3783 NC_012857.1 348669 349268 D catalyzes the interconversion of chorismate to prephenate; chorismate mutase 348669..349268 Ralstonia pickettii 12D 8021470 YP_002983715.1 CDS Rpic12D_3784 NC_012857.1 349353 350831 R KEGG: rso:RS02108 protease signal peptide protein; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; protease Do complement(349353..350831) Ralstonia pickettii 12D 8021471 YP_002983716.1 CDS Rpic12D_3785 NC_012857.1 350978 352294 R PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rso:RS02109 transmembrane two-component sensor kinase transcription regulator protein; histidine kinase complement(350978..352294) Ralstonia pickettii 12D 8021472 YP_002983717.1 CDS Rpic12D_3786 NC_012857.1 352298 353137 R PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: rso:RS02110 two-component response regulator transcription regulator protein; transcriptional regulator complement(352298..353137) Ralstonia pickettii 12D 8021473 YP_002983718.1 CDS Rpic12D_3787 NC_012857.1 353155 353997 D PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: rso:RSp1556 transcription regulation repressor HexR transcription regulator protein; RpiR family transcriptional regulator 353155..353997 Ralstonia pickettii 12D 8021474 YP_002983719.1 CDS glk NC_012857.1 354020 355075 R catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; glucokinase complement(354020..355075) Ralstonia pickettii 12D 8021475 YP_002983720.1 CDS Rpic12D_3789 NC_012857.1 355056 355760 R TIGRFAM: 6-phosphogluconolactonase; KEGG: rso:RSp1558 6-phosphogluconolactonase oxidoreductase protein; 6-phosphogluconolactonase complement(355056..355760) Ralstonia pickettii 12D 8021476 YP_002983721.1 CDS Rpic12D_3790 NC_012857.1 355760 357229 R catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase complement(355760..357229) Ralstonia pickettii 12D 8021477 YP_002983722.1 CDS Rpic12D_3791 NC_012857.1 357537 359375 D catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase 357537..359375 Ralstonia pickettii 12D 8021478 YP_002983723.1 CDS Rpic12D_3792 NC_012857.1 359392 359847 R PFAM: UspA domain protein; KEGG: rso:RS02117 hypothetical protein; UspA domain-containing protein complement(359392..359847) Ralstonia pickettii 12D 8021479 YP_002983724.1 CDS Rpic12D_3793 NC_012857.1 359981 360448 D KEGG: rso:RS02118 hypothetical protein; hypothetical protein 359981..360448 Ralstonia pickettii 12D 8021480 YP_002983725.1 CDS Rpic12D_3794 NC_012857.1 360548 361060 D KEGG: rso:RS02119 hypothetical protein; hypothetical protein 360548..361060 Ralstonia pickettii 12D 8021481 YP_002983726.1 CDS Rpic12D_3795 NC_012857.1 361289 362437 D PFAM: cytochrome C oxidase subunit II; cytochrome C class I; KEGG: rso:RSp1564 cytochrome C oxidase polypeptide II; cytochrome C oxidase subunit II 361289..362437 Ralstonia pickettii 12D 8021482 YP_002983727.1 CDS Rpic12D_3796 NC_012857.1 362450 364210 D KEGG: rso:RSp1565 cytochrome C oxidase polypeptide I; TIGRFAM: cytochrome C oxidase subunit I; PFAM: cytochrome C oxidase subunit I; cytochrome C oxidase subunit I 362450..364210 Ralstonia pickettii 12D 8021483 YP_002983728.1 CDS Rpic12D_3797 NC_012857.1 364207 364815 D PFAM: cytochrome C oxidase subunit III; KEGG: rso:RSp1566 cytochrome-C oxidase oxidoreductase protein; cytochrome C oxidase subunit III 364207..364815 Ralstonia pickettii 12D 8021484 YP_002983729.1 CDS Rpic12D_3798 NC_012857.1 364812 365504 D PFAM: cytochrome C oxidase subunit III; KEGG: rso:RSp1567 cytochrome-C oxidase subunit III oxidoreductase protein; cytochrome C oxidase subunit III 364812..365504 Ralstonia pickettii 12D 8021485 YP_002983730.1 CDS Rpic12D_3799 NC_012857.1 365512 365859 D KEGG: rso:RS02124 hypothetical protein; hypothetical protein 365512..365859 Ralstonia pickettii 12D 8021486 YP_002983731.1 CDS Rpic12D_3800 NC_012857.1 365881 367161 R PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: rso:RS02139 hypothetical protein; hypothetical protein complement(365881..367161) Ralstonia pickettii 12D 8021487 YP_002983732.1 CDS Rpic12D_3801 NC_012857.1 367239 370184 D PFAM: ABC transporter; response regulator receiver; ATP-binding region ATPase domain protein; ABC transporter transmembrane region; SMART: response regulator receiver; ATPase AAA; KEGG: bpt:Bpet2380 ABC transporter ATP-binding protein; response regulator receiver protein 367239..370184 Ralstonia pickettii 12D 8021488 YP_002983733.1 CDS Rpic12D_3802 NC_012857.1 370198 370737 D KEGG: bpt:Bpet2378 hypothetical protein; hypothetical protein 370198..370737 Ralstonia pickettii 12D 8021489 YP_002983734.1 CDS Rpic12D_3803 NC_012857.1 371087 372400 D PFAM: glycosyl transferase group 1; KEGG: reu:Reut_B4390 glycosyl transferase, group 1; group 1 glycosyl transferase 371087..372400 Ralstonia pickettii 12D 8021490 YP_002983735.1 CDS Rpic12D_3804 NC_012857.1 372397 373212 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: cti:RALTA_A0585 short-chain dehydrogenase/reductase; short-chain dehydrogenase/reductase SDR 372397..373212 Ralstonia pickettii 12D 8021491 YP_002983736.1 CDS Rpic12D_3805 NC_012857.1 373203 373817 D TIGRFAM: histidinol-phosphate phosphatase; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: reu:Reut_B4387 histidinol-phosphate phosphatase; histidinol-phosphate phosphatase 373203..373817 Ralstonia pickettii 12D 8021492 YP_002983737.1 CDS Rpic12D_3806 NC_012857.1 373814 375025 D PFAM: glycosyl transferase family 9; KEGG: cti:RALTA_A0587 lipopolysaccharide heptosyltransferase, glycosyl transferase, family 9; glycosyl transferase family protein 373814..375025 Ralstonia pickettii 12D 8021493 YP_002983738.1 CDS Rpic12D_3807 NC_012857.1 375065 376894 D PFAM: carbamoyltransferase; KEGG: bph:Bphy_5247 carbamoyltransferase; carbamoyltransferase 375065..376894 Ralstonia pickettii 12D 8021494 YP_002983739.1 CDS Rpic12D_3808 NC_012857.1 376891 377925 D PFAM: glycosyl transferase family 2; KEGG: cti:RALTA_A0589 glycosyl transferase, family 2; family 2 glycosyl transferase 376891..377925 Ralstonia pickettii 12D 8021495 YP_002983740.1 CDS Rpic12D_3809 NC_012857.1 377922 379067 D PFAM: glycosyl transferase family 9; KEGG: bph:Bphy_5245 glycosyl transferase; glycosyl transferase family protein 377922..379067 Ralstonia pickettii 12D 8021496 YP_002983741.1 CDS Rpic12D_3810 NC_012857.1 379064 380056 D KEGG: cti:RALTA_A0591 glycosyl transferase, group 1; glycosyl transferase family protein 379064..380056 Ralstonia pickettii 12D 8021497 YP_002983742.1 CDS Rpic12D_3811 NC_012857.1 380053 381075 D PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; dTDP-4-dehydrorhamnose reductase; KEGG: cti:RALTA_A0582 NAD-dependent epimerase/dehydratase; dTDP-glucose 4,6-dehydratase; UDP-glucuronate decarboxylase 3; NAD-dependent epimerase/dehydratase 380053..381075 Ralstonia pickettii 12D 8021498 YP_002983743.1 CDS Rpic12D_3812 NC_012857.1 381097 382020 R PFAM: glycosyl transferase family 2; KEGG: cti:RALTA_A0580 glycosyl transferase, family 2; family 2 glycosyl transferase complement(381097..382020) Ralstonia pickettii 12D 8021499 YP_002983744.1 CDS Rpic12D_3813 NC_012857.1 382004 382726 R PFAM: LmbE family protein; KEGG: bph:Bphy_4725 LmbE family protein; LmbE family protein complement(382004..382726) Ralstonia pickettii 12D 8021500 YP_002983745.1 CDS Rpic12D_3814 NC_012857.1 382723 382878 R hypothetical protein complement(382723..382878) Ralstonia pickettii 12D 8021501 YP_002983746.1 CDS Rpic12D_3815 NC_012857.1 382964 384235 R KEGG: reu:Reut_A1581 natural resistance-associated macrophage protein; natural resistance-associated macrophage protein complement(382964..384235) Ralstonia pickettii 12D 8021502 YP_002983747.1 CDS Rpic12D_3816 NC_012857.1 384249 384515 R KEGG: reu:Reut_B4638 hypothetical protein; hypothetical protein complement(384249..384515) Ralstonia pickettii 12D 8021503 YP_002983748.1 CDS Rpic12D_3817 NC_012857.1 384551 385042 R KEGG: bxe:Bxe_A2030 hypothetical protein; hypothetical protein complement(384551..385042) Ralstonia pickettii 12D 8021504 YP_002983749.1 CDS Rpic12D_3818 NC_012857.1 385197 386057 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: azo:azo1732 short-chain dehydrogenase family protein; short-chain dehydrogenase/reductase SDR 385197..386057 Ralstonia pickettii 12D 8021505 YP_002983750.1 CDS Rpic12D_3819 NC_012857.1 386379 389585 D PFAM: acriflavin resistance protein; KEGG: rso:RS02154 transport transmembrane protein; acriflavin resistance protein 386379..389585 Ralstonia pickettii 12D 8021506 YP_002983751.1 CDS Rpic12D_3820 NC_012857.1 389578 390891 D TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: rso:RS02155 transport transmembrane protein; RND family efflux transporter MFP subunit 389578..390891 Ralstonia pickettii 12D 8021507 YP_002983752.1 CDS Rpic12D_3821 NC_012857.1 390888 392342 D TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rso:RS02156 outer membrane drug efflux lipoprotein; NodT family RND efflux system outer membrane lipoprotein 390888..392342 Ralstonia pickettii 12D 8021508 YP_002983753.1 CDS Rpic12D_3822 NC_012857.1 392346 393275 R KEGG: rso:RS02157 hypothetical protein; hypothetical protein complement(392346..393275) Ralstonia pickettii 12D 8021509 YP_002983754.1 CDS Rpic12D_3823 NC_012857.1 393727 394083 D PFAM: endoribonuclease L-PSP; KEGG: bph:Bphy_5466 endoribonuclease L-PSP; endoribonuclease L-PSP 393727..394083 Ralstonia pickettii 12D 8021510 YP_002983755.1 CDS Rpic12D_3824 NC_012857.1 394097 395347 D PFAM: FAD dependent oxidoreductase; KEGG: bxe:Bxe_B0799 D-amino-acid dehydrogenase; FAD dependent oxidoreductase 394097..395347 Ralstonia pickettii 12D 8021511 YP_002983756.1 CDS Rpic12D_3825 NC_012857.1 395349 396827 R PFAM: Microcystin LR degradation protein MlrC-like; MlrC domain protein; KEGG: cti:RALTA_B1311 conserved hypothetical protein, DUF1485; microcystin LR degradation protein MlrC-like protein complement(395349..396827) Ralstonia pickettii 12D 8021512 YP_002983757.1 CDS Rpic12D_3826 NC_012857.1 396848 398110 R KEGG: cti:RALTA_B1312 amidase, hydantoinase/carbamoylase, N-carbamoyl-L-amino-acid hydrolase; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20; amidase complement(396848..398110) Ralstonia pickettii 12D 8021513 YP_002983758.1 CDS Rpic12D_3827 NC_012857.1 398107 398820 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cti:RALTA_B1313 high-affinity branched-chain amino acid transporter (ABC superfamily, atp_bind); ABC transporter complement(398107..398820) Ralstonia pickettii 12D 8021514 YP_002983759.1 CDS Rpic12D_3828 NC_012857.1 398817 399587 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: cti:RALTA_B1314 high-affinity branched-chain amino acid transporter (ABC superfamily, atp_bind); ABC transporter complement(398817..399587) Ralstonia pickettii 12D 8021515 YP_002983760.1 CDS Rpic12D_3829 NC_012857.1 399584 400552 R PFAM: inner-membrane translocator; KEGG: cti:RALTA_B1315 branched-chain amino acid inner-membrane translocator; inner-membrane translocator complement(399584..400552) Ralstonia pickettii 12D 8021516 YP_002983761.1 CDS Rpic12D_3830 NC_012857.1 400552 401409 R PFAM: inner-membrane translocator; KEGG: cti:RALTA_B1316 branched-chain amino acid inner-membrane translocator; inner-membrane translocator complement(400552..401409) Ralstonia pickettii 12D 8021517 YP_002983762.1 CDS Rpic12D_3831 NC_012857.1 401471 402670 R PFAM: extracellular ligand-binding receptor; KEGG: cti:RALTA_B1317 branched-chain amino acid ABC transporter periplasmic amino acid-binding protein; extracellular ligand-binding receptor complement(401471..402670) Ralstonia pickettii 12D 8021518 YP_002983763.1 CDS Rpic12D_3832 NC_012857.1 402739 402834 R hypothetical protein complement(402739..402834) Ralstonia pickettii 12D 8021519 YP_002983764.1 CDS Rpic12D_3833 NC_012857.1 403026 403865 D PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: cti:RALTA_B1318 regulatory protein, GntR; GntR family transcriptional regulator 403026..403865 Ralstonia pickettii 12D 8021520 YP_002983765.1 CDS Rpic12D_3834 NC_012857.1 403870 404313 R catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide; cyanate hydratase complement(403870..404313) Ralstonia pickettii 12D 8021521 YP_002983766.1 CDS Rpic12D_3835 NC_012857.1 404614 405984 D PFAM: carbohydrate-selective porin OprB; KEGG: rso:RSp1632 porin B precursor outer (glucose porin) transmembrane protein; carbohydrate-selective porin OprB 404614..405984 Ralstonia pickettii 12D 8021522 YP_002983767.1 CDS Rpic12D_3836 NC_012857.1 406016 407023 D TIGRFAM: D-xylose ABC transporter periplasmic substrate-binding protein; KEGG: rso:RSp1633 D-xylose-binding periplasmic ABC transporter protein; D-xylose ABC transporter periplasmic substrate-binding protein 406016..407023 Ralstonia pickettii 12D 8021523 YP_002983768.1 CDS Rpic12D_3837 NC_012857.1 407054 408601 D with XylFH is part of the high affinity xylose ABC transporter; sugar ABC transporter ATP-binding protein 407054..408601 Ralstonia pickettii 12D 8021524 YP_002983769.1 CDS Rpic12D_3838 NC_012857.1 408608 409816 D PFAM: inner-membrane translocator; KEGG: rso:RSp1635 xylose transmembrane ABC transporter protein; sugar ABC transporter ATPase 408608..409816 Ralstonia pickettii 12D 8021525 YP_002983770.1 CDS Rpic12D_3839 NC_012857.1 409952 410869 D PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; short-chain dehydrogenase/reductase SDR; KEGG: rso:RS02194 oxidoreductase protein; NAD-dependent epimerase/dehydratase 409952..410869 Ralstonia pickettii 12D 8021526 YP_002983771.1 CDS Rpic12D_3840 NC_012857.1 410927 412165 R KEGG: rme:Rmet_2737 hypothetical protein; hypothetical protein complement(410927..412165) Ralstonia pickettii 12D 8021527 YP_002983772.1 CDS Rpic12D_3841 NC_012857.1 412601 413641 R PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: rso:RS02195 transcription regulator transcription regulator protein; LacI family transcriptional regulator complement(412601..413641) Ralstonia pickettii 12D 8021528 YP_002983773.1 CDS Rpic12D_3842 NC_012857.1 413744 414637 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RS02196 hypothetical protein; hypothetical protein complement(413744..414637) Ralstonia pickettii 12D 8021529 YP_002983774.1 CDS Rpic12D_3843 NC_012857.1 414745 415542 D PFAM: helix-turn-helix- domain containing protein AraC type; cupin; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rso:RS02197 transcriptional regulator transcription regulator protein; AraC family transcriptional regulator 414745..415542 Ralstonia pickettii 12D 8021530 YP_002983775.1 CDS Rpic12D_3844 NC_012857.1 415885 416379 D KEGG: rme:Rmet_5762 hypothetical protein; hypothetical protein 415885..416379 Ralstonia pickettii 12D 8021531 YP_002983776.1 CDS Rpic12D_3845 NC_012857.1 416376 416864 D KEGG: rme:Rmet_5763 hypothetical protein; hypothetical protein 416376..416864 Ralstonia pickettii 12D 8021532 YP_002983777.1 CDS Rpic12D_3846 NC_012857.1 416977 417393 D PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rso:RS02203 transcription regulator transcription regulator protein; MarR family transcriptional regulator 416977..417393 Ralstonia pickettii 12D 8021533 YP_002983778.1 CDS Rpic12D_3847 NC_012857.1 417444 417836 D PFAM: 4-oxalocrotonate tautomerase; KEGG: rso:RS02204 hypothetical protein; 4-oxalocrotonate tautomerase 417444..417836 Ralstonia pickettii 12D 8021534 YP_002983779.1 CDS Rpic12D_3848 NC_012857.1 417836 418015 D KEGG: rso:RS02205 transmembrane protein; hypothetical protein 417836..418015 Ralstonia pickettii 12D 8021535 YP_002983780.1 CDS Rpic12D_3849 NC_012857.1 418032 419051 R PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bte:BTH_I0059 AraC family transcription regulator; AraC family transcriptional regulator complement(418032..419051) Ralstonia pickettii 12D 8021536 YP_002983781.1 CDS Rpic12D_3850 NC_012857.1 419137 420279 D PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: bpl:BURPS1106A_0069 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 419137..420279 Ralstonia pickettii 12D 8021537 YP_002983782.1 CDS Rpic12D_3851 NC_012857.1 420307 421512 D Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 420307..421512 Ralstonia pickettii 12D 8021538 YP_002983783.1 CDS Rpic12D_3852 NC_012857.1 421526 423652 D PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: bte:BTH_I0062 fatty oxidation complex, subunit alpha; NAD-binding 3-hydroxyacyl-CoA dehydrogenase 421526..423652 Ralstonia pickettii 12D 8021539 YP_002983784.1 CDS Rpic12D_3853 NC_012857.1 423932 426640 D KEGG: reh:H16_A0025 predicted signal transduction protein containing PAS, GGDEF and EAL domains; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 423932..426640 Ralstonia pickettii 12D 8021540 YP_002983785.1 CDS Rpic12D_3856 NC_012857.1 427376 427852 D PFAM: protein of unknown function DUF305; KEGG: rme:Rmet_5398 protein of unknown function DUF305; hypothetical protein 427376..427852 Ralstonia pickettii 12D 8021543 YP_002983786.1 CDS Rpic12D_3857 NC_012857.1 427852 429327 D TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: bph:Bphy_6260 YVTN beta-propeller repeat-containing protein; 40-residue YVTN family beta-propeller repeat-containing protein 427852..429327 Ralstonia pickettii 12D 8021544 YP_002983787.1 CDS Rpic12D_3858 NC_012857.1 429420 430049 D PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: reh:H16_A1620 DnaJ-class molecular chaperone; heat shock protein DnaJ domain-containing protein 429420..430049 Ralstonia pickettii 12D 8021545 YP_002983788.1 CDS Rpic12D_3859 NC_012857.1 430156 430323 R hypothetical protein complement(430156..430323) Ralstonia pickettii 12D 8021546 YP_002983789.1 CDS Rpic12D_3860 NC_012857.1 430418 431809 D PFAM: extracellular solute-binding protein family 1; KEGG: bph:Bphy_7218 extracellular solute-binding protein; family 1 extracellular solute-binding protein 430418..431809 Ralstonia pickettii 12D 8021547 YP_002983790.1 CDS Rpic12D_3861 NC_012857.1 431806 434748 D KEGG: bph:Bphy_7217 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; hypothetical protein; histidine kinase HAMP region domain protein; SMART: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 431806..434748 Ralstonia pickettii 12D 8021548 YP_002983791.1 CDS Rpic12D_3862 NC_012857.1 434985 435890 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pap:PSPA7_0301 MdcR; LysR family transcriptional regulator complement(434985..435890) Ralstonia pickettii 12D 8021549 YP_002983792.1 CDS Rpic12D_3863 NC_012857.1 436056 437744 D TIGRFAM: malonate decarboxylase, subunit alpha; KEGG: pap:PSPA7_0292 malonate decarboxylase subunit alpha; malonate decarboxylase subunit alpha 436056..437744 Ralstonia pickettii 12D 8021550 YP_002983793.1 CDS Rpic12D_3864 NC_012857.1 437744 438673 D catalyzes the reversible formation of 2'-(5''-triphosphoribosyl)-3'dephospho-CoA from 3-dephospho-CoA; triphosphoribosyl-dephospho-CoA synthase 437744..438673 Ralstonia pickettii 12D 8021551 YP_002983794.1 CDS Rpic12D_3865 NC_012857.1 438660 438965 D TIGRFAM: malonate decarboxylase acyl carrier protein; PFAM: malonate decarboxylase subunit delta; KEGG: pna:Pnap_0948 malonate decarboxylase subunit delta; malonate decarboxylase acyl carrier protein 438660..438965 Ralstonia pickettii 12D 8021552 YP_002983795.1 CDS Rpic12D_3866 NC_012857.1 438975 439820 D The subunit beta catalyzes the decarboxylation of the malonyl moiety on coenzyme A; malonate decarboxylase subunit beta 438975..439820 Ralstonia pickettii 12D 8021553 YP_002983796.1 CDS Rpic12D_3867 NC_012857.1 439817 440647 D TIGRFAM: malonate decarboxylase, subunit gamma; PFAM: malonate decarboxylase subunit gamma; KEGG: pna:Pnap_0950 malonate decarboxylase subunit gamma; malonate decarboxylase subunit gamma 439817..440647 Ralstonia pickettii 12D 8021554 YP_002983797.1 CDS Rpic12D_3868 NC_012857.1 441018 441425 D TIGRFAM: malonate transporter MadL subunit; PFAM: malonate transporter MadL subunit; KEGG: reu:Reut_A1611 malonate transporter MadL subunit; malonate transporter MadL subunit 441018..441425 Ralstonia pickettii 12D 8021555 YP_002983798.1 CDS Rpic12D_3869 NC_012857.1 441437 442201 D TIGRFAM: malonate transporter MadM subunit; PFAM: malonate/sodium symporter MadM subunit; KEGG: bcm:Bcenmc03_1240 malonate transporter MadM subunit; malonate transporter MadM subunit 441437..442201 Ralstonia pickettii 12D 8021556 YP_002983799.1 CDS Rpic12D_3870 NC_012857.1 442198 442833 D Catalyzes the transfer of 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A to the apo-acyl carrier protein of malonate dehydrogenase to form holo-acyl carrier protein; phosphoribosyl-dephospho-CoA transferase 442198..442833 Ralstonia pickettii 12D 8021557 YP_002983800.1 CDS Rpic12D_3871 NC_012857.1 442830 443765 D TIGRFAM: malonate decarboxylase, subunit epsilon; PFAM: acyl transferase; KEGG: pae:PA0214 acyl transferase; malonate decarboxylase subunit epsilon 442830..443765 Ralstonia pickettii 12D 8021558 YP_002983801.1 CDS prfC NC_012857.1 443817 445412 R stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 complement(443817..445412) Ralstonia pickettii 12D 8021559 YP_002983802.1 CDS Rpic12D_3873 NC_012857.1 445693 446001 D KEGG: rso:RS02222 hypothetical protein; hypothetical protein 445693..446001 Ralstonia pickettii 12D 8021560 YP_002983803.1 CDS Rpic12D_3874 NC_012857.1 446124 446426 D KEGG: pol:Bpro_3432 hypothetical protein; hypothetical protein 446124..446426 Ralstonia pickettii 12D 8021561 YP_002983804.1 CDS Rpic12D_3875 NC_012857.1 446441 447430 R PFAM: ribonuclease BN; KEGG: rso:RS02223 ribonuclease RNase BN (RBN) transmembrane protein; ribonuclease BN complement(446441..447430) Ralstonia pickettii 12D 8021562 YP_002983805.1 CDS Rpic12D_3876 NC_012857.1 447515 447820 R KEGG: rso:RS02224 hypothetical protein; hypothetical protein complement(447515..447820) Ralstonia pickettii 12D 8021563 YP_002983806.1 CDS Rpic12D_3877 NC_012857.1 447874 448041 R PFAM: protein of unknown function DUF1328; KEGG: rso:RS02225 hypothetical protein; hypothetical protein complement(447874..448041) Ralstonia pickettii 12D 8021564 YP_002983807.1 CDS Rpic12D_3878 NC_012857.1 448161 449567 R PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; ATPase AAA; KEGG: rso:RS02226 sigma-54 interacting response regulator transcription regulator protein; Fis family transcriptional regulator complement(448161..449567) Ralstonia pickettii 12D 8021565 YP_002983808.1 CDS Rpic12D_3879 NC_012857.1 450104 451201 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: rso:RS02227 sigma-54 interacting transcription regulator protein; Fis family transcriptional regulator 450104..451201 Ralstonia pickettii 12D 8021566 YP_002983809.1 CDS Rpic12D_3880 NC_012857.1 451260 451406 R KEGG: rso:RS02228 hypothetical protein; hypothetical protein complement(451260..451406) Ralstonia pickettii 12D 8021567 YP_002983810.1 CDS Rpic12D_3881 NC_012857.1 451424 451744 R KEGG: rso:RS02229 signal peptide protein; signal peptide protein complement(451424..451744) Ralstonia pickettii 12D 8021568 YP_002983811.1 CDS Rpic12D_3882 NC_012857.1 452057 453559 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 452057..453559 Ralstonia pickettii 12D 8021569 YP_002983812.1 CDS Rpic12D_3883 NC_012857.1 453586 454785 D PFAM: glycosyl transferase group 1; KEGG: eba:ebA6934 glycosyltransferase; group 1 glycosyl transferase 453586..454785 Ralstonia pickettii 12D 8021570 YP_002983813.1 CDS Rpic12D_3884 NC_012857.1 454804 455598 D KEGG: rso:RS02231 hypothetical protein; hypothetical protein 454804..455598 Ralstonia pickettii 12D 8021571 YP_002983814.1 CDS Rpic12D_3885 NC_012857.1 455605 456141 R PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: eba:ebA6940 hypothetical protein; PA-phosphatase-like phosphoesterase complement(455605..456141) Ralstonia pickettii 12D 8021572 YP_002983815.1 CDS Rpic12D_3886 NC_012857.1 456119 457291 R PFAM: glycosyl transferase group 1; KEGG: lch:Lcho_3607 glycosyl transferase group 1; group 1 glycosyl transferase complement(456119..457291) Ralstonia pickettii 12D 8021573 YP_002983816.1 CDS Rpic12D_3887 NC_012857.1 457300 457731 R KEGG: rso:RS02233 hypothetical protein; hypothetical protein complement(457300..457731) Ralstonia pickettii 12D 8021574 YP_002983817.1 CDS Rpic12D_3888 NC_012857.1 457933 459252 R PFAM: protein of unknown function UPF0118; KEGG: aav:Aave_2002 protein of unknown function UPF0118; hypothetical protein complement(457933..459252) Ralstonia pickettii 12D 8021575 YP_002983818.1 CDS Rpic12D_3889 NC_012857.1 459254 461638 R KEGG: rso:RS02235 composite two-component sensor kinase and response regulator hybrid transcription regulator protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; PAS domain containing protein; PAS/PAC sensor hybrid histidine kinase complement(459254..461638) Ralstonia pickettii 12D 8021576 YP_002983819.1 CDS Rpic12D_3890 NC_012857.1 461723 462505 R KEGG: bch:Bcen2424_4033 hypothetical protein; hypothetical protein complement(461723..462505) Ralstonia pickettii 12D 8021577 YP_002983820.1 CDS Rpic12D_3891 NC_012857.1 462798 464081 D KEGG: rso:RS02236 prolin-rich protein; hypothetical protein 462798..464081 Ralstonia pickettii 12D 8021578 YP_002983821.1 CDS Rpic12D_3892 NC_012857.1 464355 465659 R PFAM: xanthine/uracil/vitamin C permease; KEGG: rso:RS02237 hypothetical protein; xanthine/uracil/vitamin C permease complement(464355..465659) Ralstonia pickettii 12D 8021579 YP_002983822.1 CDS Rpic12D_3893 NC_012857.1 465656 466405 R hypothetical protein complement(465656..466405) Ralstonia pickettii 12D 8021580 YP_002983823.1 CDS Rpic12D_3894 NC_012857.1 467065 468138 D PFAM: plasmid encoded RepA protein; KEGG: rso:RSp0001 RepA replicase protein; plasmid encoded RepA protein 467065..468138 Ralstonia pickettii 12D 8021581 YP_002983824.1 CDS Rpic12D_3895 NC_012857.1 468215 468418 R PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: rso:RSp0002 cold shock-like transcription regulator protein; cold-shock DNA-binding domain-containing protein complement(468215..468418) Ralstonia pickettii 12D 8021582 YP_002983825.1 CDS Rpic12D_3896 NC_012857.1 468824 469492 D PFAM: cobyrinic acid ac-diamide synthase; KEGG: rso:RSp0003 partition protein; cobyrinic acid ac-diamide synthase 468824..469492 Ralstonia pickettii 12D 8021583 YP_002983826.1 CDS Rpic12D_3897 NC_012857.1 469489 470496 D KEGG: rso:RSp0004 partitioning protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; parB-like partition protein 469489..470496 Ralstonia pickettii 12D 8021584 YP_002983827.1 CDS Rpic12D_3898 NC_012857.1 470795 471631 D KEGG: rso:RS01977 hypothetical protein; hypothetical protein 470795..471631 Ralstonia pickettii 12D 8021585 YP_002983828.1 CDS Rpic12D_3899 NC_012857.1 471882 472835 D TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: nucleotidyl transferase; KEGG: rso:RSp0006 UTP--glucose-1-phosphate uridylyltransferase UDP-glucose pyrophosphorylase protein; UTP-glucose-1-phosphate uridylyltransferase 471882..472835 Ralstonia pickettii 12D 8021586 YP_002983829.1 CDS Rpic12D_3900 NC_012857.1 473094 474440 D PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: rso:RSp0007 alpha-ketoglutarate permease transmembrane protein; general substrate transporter 473094..474440 Ralstonia pickettii 12D 8021587 YP_002983830.1 CDS Rpic12D_3901 NC_012857.1 474505 476352 D PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rso:RSp0008 C4-dicarboxylate transport sensor kinase transcription regulator protein; histidine kinase 474505..476352 Ralstonia pickettii 12D 8021588 YP_002983831.1 CDS Rpic12D_3902 NC_012857.1 476349 477707 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; ATPase AAA; KEGG: rso:RSp0009 response regulator of the C4-dicarboxylate transport two-component regulatory system transcription regulator protein; Fis family two component sigma-54 specific transcriptional regulator 476349..477707 Ralstonia pickettii 12D 8021589 YP_002983832.1 CDS Rpic12D_3903 NC_012857.1 477704 478504 R KEGG: rso:RS01982 lipoprotein transmembrane; lipoprotein transmembrane complement(477704..478504) Ralstonia pickettii 12D 8021590 YP_002983833.1 CDS Rpic12D_3904 NC_012857.1 478617 479057 D KEGG: rso:RS01983 signal peptide protein; signal peptide protein 478617..479057 Ralstonia pickettii 12D 8021591 YP_002983834.1 CDS Rpic12D_3905 NC_012857.1 479170 481851 D KEGG: rso:RS01984 hypothetical protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase HAMP region domain protein; SMART: GGDEF domain containing protein; histidine kinase HAMP region domain protein; PAS domain containing protein; diguanylate cyclase 479170..481851 Ralstonia pickettii 12D 8021592 YP_002983835.1 CDS Rpic12D_3906 NC_012857.1 482286 483446 D PFAM: extracellular ligand-binding receptor; KEGG: rso:RS01985 amino acid-binding periplasmic (PBP) ABC transporter protein; extracellular ligand-binding receptor 482286..483446 Ralstonia pickettii 12D 8021593 YP_002983836.1 CDS Rpic12D_3907 NC_012857.1 483543 484424 D PFAM: inner-membrane translocator; KEGG: rso:RS01986 amino-acid transmembrane lipoprotein ABC transporter; inner-membrane translocator 483543..484424 Ralstonia pickettii 12D 8021594 YP_002983837.1 CDS Rpic12D_3908 NC_012857.1 484438 485346 D PFAM: inner-membrane translocator; KEGG: rso:RS01987 amino-acid transmembrane ABC transporter protein; inner-membrane translocator 484438..485346 Ralstonia pickettii 12D 8021595 YP_002983838.1 CDS Rpic12D_3909 NC_012857.1 485354 486151 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: rso:RS01988 amino-acid ATP-binding ABC transporter protein; ABC transporter 485354..486151 Ralstonia pickettii 12D 8021596 YP_002983839.1 CDS Rpic12D_3910 NC_012857.1 486148 486873 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: rso:RS01989 amino-acid ATP-binding ABC transporter protein; ABC transporter 486148..486873 Ralstonia pickettii 12D 8021597 YP_002983840.1 CDS Rpic12D_3911 NC_012857.1 486947 487843 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RS01990 transcriptional regulator transcription regulator protein; LysR family transcriptional regulator complement(486947..487843) Ralstonia pickettii 12D 8021598 YP_002983841.1 CDS Rpic12D_3912 NC_012857.1 488019 489017 D PFAM: alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase GroES domain protein; KEGG: bac:BamMC406_4513 alcohol dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein 488019..489017 Ralstonia pickettii 12D 8021599 YP_002983842.1 CDS Rpic12D_3913 NC_012857.1 489113 489430 D PFAM: YCII-related; KEGG: rso:RS01991 hypothetical protein; hypothetical protein 489113..489430 Ralstonia pickettii 12D 8021600 YP_002983843.1 CDS Rpic12D_3914 NC_012857.1 489483 490877 D PFAM: chloride channel core; KEGG: rso:RS01992 voltage-gated ClC-type chloride channel ClcB; chloride channel core 489483..490877 Ralstonia pickettii 12D 8021601 YP_002983844.1 CDS Rpic12D_3915 NC_012857.1 491147 493375 D TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: reu:Reut_A2876 TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 491147..493375 Ralstonia pickettii 12D 8021602 YP_002983845.1 CDS Rpic12D_3916 NC_012857.1 493424 494110 D PFAM: 2OG-Fe(II) oxygenase; SMART: prolyl 4-hydroxylase subunit alpha; KEGG: reu:Reut_A2877 hydroxylase; hydroxylase 493424..494110 Ralstonia pickettii 12D 8021603 YP_002983846.1 CDS Rpic12D_3917 NC_012857.1 494171 494317 R KEGG: rso:RS01993 hypothetical protein; hypothetical protein complement(494171..494317) Ralstonia pickettii 12D 8021604 YP_002983847.1 CDS Rpic12D_3918 NC_012857.1 494442 496970 R PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: nmu:Nmul_A1613 pyruvate, water dikinase; pyruvate, water dikinase complement(494442..496970) Ralstonia pickettii 12D 8021605 YP_002983848.1 CDS Rpic12D_3919 NC_012857.1 496970 497599 R PFAM: regulatory protein TetR; KEGG: bcm:Bcenmc03_3801 TetR family transcriptional regulator; TetR family transcriptional regulator complement(496970..497599) Ralstonia pickettii 12D 8021606 YP_002983849.1 CDS Rpic12D_3920 NC_012857.1 497719 498672 D KEGG: reh:H16_B2515 prolyl aminopeptidase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold; proline iminopeptidase 497719..498672 Ralstonia pickettii 12D 8021607 YP_002983850.1 CDS Rpic12D_3921 NC_012857.1 498727 501153 D KEGG: bcj:BCAM2757 two-component regulatory system, sensor kinase protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; Hpt domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; extracellular solute-binding protein family 3; histidine kinase A domain protein; Hpt sensor hybrid histidine kinase 498727..501153 Ralstonia pickettii 12D 8021608 YP_002983851.1 CDS Rpic12D_3922 NC_012857.1 501595 502182 D PFAM: fimbrial protein; KEGG: pfl:PFL_3922 type I pilus biogenesis protein; fimbrial protein 501595..502182 Ralstonia pickettii 12D 8021609 YP_002983852.1 CDS Rpic12D_3923 NC_012857.1 502267 503010 D PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: pfo:Pfl01_3043 pili assembly chaperone; Pili assembly chaperone, N-terminal 502267..503010 Ralstonia pickettii 12D 8021610 YP_002983853.1 CDS Rpic12D_3924 NC_012857.1 503094 505721 D PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: pfo:Pfl01_3044 fimbrial biogenesis outer membrane usher protein; fimbrial biogenesis outer membrane usher protein 503094..505721 Ralstonia pickettii 12D 8021611 YP_002983854.1 CDS Rpic12D_3925 NC_012857.1 506312 506758 D KEGG: rme:Rmet_4253 fimbrial protein; hypothetical protein 506312..506758 Ralstonia pickettii 12D 8021612 YP_002983855.1 CDS Rpic12D_3926 NC_012857.1 507072 507452 D KEGG: pfo:Pfl01_3037 fimbrial protein; hypothetical protein 507072..507452 Ralstonia pickettii 12D 8021613 YP_002983856.1 CDS Rpic12D_3927 NC_012857.1 507480 507776 D PFAM: transposase IS3/IS911 family protein; KEGG: rme:Rmet_6073 transposase IS3/IS911; transposase IS3/IS911 family protein 507480..507776 Ralstonia pickettii 12D 8021614 YP_002983857.1 CDS Rpic12D_3928 NC_012857.1 507773 508666 D PFAM: Integrase catalytic region; KEGG: rme:Rmet_6074 integrase, catalytic region; integrase catalytic subunit 507773..508666 Ralstonia pickettii 12D 8021615 YP_002983858.1 CDS Rpic12D_3929 NC_012857.1 508678 509346 D PFAM: fimbrial protein; KEGG: rme:Rmet_4253 fimbrial protein; fimbrial protein 508678..509346 Ralstonia pickettii 12D 8021616 YP_002983859.1 CDS Rpic12D_3930 NC_012857.1 509835 510662 D PFAM: penicillin-binding protein transpeptidase; KEGG: rso:RS02005 oxacillin hydrolase; beta-lactamase 509835..510662 Ralstonia pickettii 12D 8021618 YP_002983860.1 CDS Rpic12D_3931 NC_012857.1 510672 511397 R PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: bpt:Bpet1842 ArsR family transcriptional regulator; ArsR family transcriptional regulator complement(510672..511397) Ralstonia pickettii 12D 8021619 YP_002983861.1 CDS Rpic12D_3932 NC_012857.1 511519 512895 D PFAM: major facilitator superfamily MFS_1; KEGG: bcm:Bcenmc03_5842 major facilitator transporter; major facilitator superfamily protein 511519..512895 Ralstonia pickettii 12D 8021620 YP_002983862.1 CDS Rpic12D_3933 NC_012857.1 513712 513891 D KEGG: azc:AZC_1023 hypothetical protein; hypothetical protein 513712..513891 Ralstonia pickettii 12D 8021621 YP_002983863.1 CDS Rpic12D_3934 NC_012857.1 513891 515399 D PFAM: Na+/solute symporter; KEGG: azc:AZC_1022 monocarboxylic acid permease; Na+/solute symporter 513891..515399 Ralstonia pickettii 12D 8021622 YP_002983864.1 CDS Rpic12D_3935 NC_012857.1 515684 516082 D KEGG: reu:Reut_B5732 hypothetical protein; hypothetical protein 515684..516082 Ralstonia pickettii 12D 8021623 YP_002983865.1 CDS Rpic12D_3936 NC_012857.1 516200 516484 D KEGG: rso:RSc2698 hypothetical protein; hypothetical protein 516200..516484 Ralstonia pickettii 12D 8021624 YP_002983866.1 CDS Rpic12D_3937 NC_012857.1 516636 517058 R PFAM: GCN5-related N-acetyltransferase; KEGG: bur:Bcep18194_C6566 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(516636..517058) Ralstonia pickettii 12D 8021625 YP_002983867.1 CDS Rpic12D_3938 NC_012857.1 517110 518180 R TIGRFAM: arsenic resistance protein; PFAM: Bile acid:sodium symporter; KEGG: bmj:BMULJ_05805 ACR3 family arsenite transporter; arsenic resistance protein complement(517110..518180) Ralstonia pickettii 12D 8021626 YP_002983868.1 CDS Rpic12D_3939 NC_012857.1 518254 518757 R PFAM: protein-tyrosine phosphatase, low molecular weight; SMART: protein-tyrosine phosphatase, low molecular weight; KEGG: rso:RSp1128 arsenate reductase (arsenical PUMP modifier) protein; protein-tyrosine phosphatase, low molecular weight complement(518254..518757) Ralstonia pickettii 12D 8021627 YP_002983869.1 CDS Rpic12D_3940 NC_012857.1 518768 519250 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: reh:H16_A2179 lactoylglutathione lyase; glyoxalase/bleomycin resistance protein/dioxygenase complement(518768..519250) Ralstonia pickettii 12D 8021628 YP_002983870.1 CDS Rpic12D_3941 NC_012857.1 519262 519585 R SMART: regulatory protein ArsR; KEGG: rso:RSp1129 arsenical resistance operon repressor transcription regulator protein; ArsR family transcriptional regulator complement(519262..519585) Ralstonia pickettii 12D 8021629 YP_002983871.1 CDS rdgC NC_012857.1 519865 520785 D Required for efficient pilin antigenic variation; recombination associated protein 519865..520785 Ralstonia pickettii 12D 8021630 YP_002983872.1 CDS Rpic12D_3943 NC_012857.1 520843 521520 R KEGG: rme:Rmet_4026 periplasmic ligand-binding sensor protein; periplasmic ligand-binding sensor protein complement(520843..521520) Ralstonia pickettii 12D 8021631 YP_002983873.1 CDS Rpic12D_3944 NC_012857.1 521787 524165 D catalyzes the conversion of salicylyl-CoA to gentisyl-CoA; salicylyl-CoA 5-hydroxylase 521787..524165 Ralstonia pickettii 12D 8021632 YP_002983874.1 CDS Rpic12D_3945 NC_012857.1 524167 524949 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: rso:RS02008 oxidoreductase protein; short-chain dehydrogenase/reductase SDR 524167..524949 Ralstonia pickettii 12D 8021633 YP_002983875.1 CDS Rpic12D_3946 NC_012857.1 524946 525530 D PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rso:RS02009 transcription regulator protein; MarR family transcriptional regulator 524946..525530 Ralstonia pickettii 12D 8021634 YP_002983876.1 CDS Rpic12D_3947 NC_012857.1 525548 526408 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 525548..526408 Ralstonia pickettii 12D 8021635 YP_002983877.1 CDS Rpic12D_3948 NC_012857.1 526410 527585 D PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: rso:RS02011 acyl-CoA dehydrogenase oxidoreductase protein; acyl-CoA dehydrogenase domain-containing protein 526410..527585 Ralstonia pickettii 12D 8021636 YP_002983878.1 CDS Rpic12D_3949 NC_012857.1 527622 529238 D PFAM: AMP-dependent synthetase and ligase; KEGG: rso:RS02012 acetyl-coenzyme A synthetase; AMP-dependent synthetase and ligase 527622..529238 Ralstonia pickettii 12D 8021637 YP_002983879.1 CDS Rpic12D_3950 NC_012857.1 529235 529666 D KEGG: rso:RS02013 4-hydroxybenzoyl-CoA thioesterase protein; 4-hydroxybenzoyl-CoA thioesterase 529235..529666 Ralstonia pickettii 12D 8021638 YP_002983880.1 CDS Rpic12D_3951 NC_012857.1 529680 530072 D PFAM: endoribonuclease L-PSP; KEGG: rso:RS02014 hypothetical protein; endoribonuclease L-PSP 529680..530072 Ralstonia pickettii 12D 8021639 YP_002983881.1 CDS Rpic12D_3952 NC_012857.1 530378 531454 R SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rme:Rmet_1732 AraC family transcriptional regulator; AraC family transcriptional regulator complement(530378..531454) Ralstonia pickettii 12D 8021640 YP_002983882.1 CDS Rpic12D_3953 NC_012857.1 531594 531989 D PFAM: carboxymuconolactone decarboxylase; KEGG: reu:Reut_B4714 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 531594..531989 Ralstonia pickettii 12D 8021641 YP_002983883.1 CDS Rpic12D_3954 NC_012857.1 532025 533074 D PFAM: protein of unknown function DUF849; KEGG: reu:Reut_B4715 hypothetical protein; hypothetical protein 532025..533074 Ralstonia pickettii 12D 8021642 YP_002983884.1 CDS Rpic12D_3955 NC_012857.1 533190 534011 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_A3610 dehydrogenase; short-chain dehydrogenase/reductase SDR 533190..534011 Ralstonia pickettii 12D 8021643 YP_002983885.1 CDS Rpic12D_3956 NC_012857.1 534129 535412 D PFAM: major facilitator superfamily MFS_1; KEGG: reu:Reut_B4716 major facilitator transporter; major facilitator superfamily protein 534129..535412 Ralstonia pickettii 12D 8021644 YP_002983886.1 CDS Rpic12D_3958 NC_012857.1 535970 537274 R TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: general substrate transporter; major facilitator superfamily MFS_1; KEGG: rso:RSp0075 alpha-ketoglutarate permease transmembrane protein; metabolite/H+ symporter, major facilitator superfamily (MFS) complement(535970..537274) Ralstonia pickettii 12D 8021646 YP_002983887.1 CDS Rpic12D_3959 NC_012857.1 537458 538678 R PFAM: major facilitator superfamily MFS_1; KEGG: rso:RS05543 hypothetical protein; major facilitator superfamily protein complement(537458..538678) Ralstonia pickettii 12D 8021647 YP_002983888.1 CDS Rpic12D_3960 NC_012857.1 538778 539614 R PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: rso:RS05542 DNA-binding transcriptional regulatory transcription regulator protein; GntR family transcriptional regulator complement(538778..539614) Ralstonia pickettii 12D 8021648 YP_002983889.1 CDS Rpic12D_3961 NC_012857.1 539779 540330 R PFAM: helix-turn-helix HxlR type; KEGG: rso:RS05541 hypothetical protein; HxlR family transcriptional regulator complement(539779..540330) Ralstonia pickettii 12D 8021649 YP_002983890.1 CDS Rpic12D_3962 NC_012857.1 540464 541042 D PFAM: GCN5-related N-acetyltransferase; KEGG: rso:RS05540 hypothetical protein; N-acetyltransferase GCN5 540464..541042 Ralstonia pickettii 12D 8021650 YP_002983891.1 CDS Rpic12D_3963 NC_012857.1 541281 541715 D PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bxe:Bxe_B2073 glyoxalase/bleomycin resistanceprotein/dioxygenase superfamily protein; glyoxalase/bleomycin resistance protein/dioxygenase 541281..541715 Ralstonia pickettii 12D 8021651 YP_002983892.1 CDS Rpic12D_3964 NC_012857.1 541766 542638 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: reu:Reut_B4146 LysR family transcriptional regulator; LysR family transcriptional regulator 541766..542638 Ralstonia pickettii 12D 8021652 YP_002983893.1 CDS Rpic12D_3965 NC_012857.1 542739 543524 D TIGRFAM: molybdenum ABC transporter periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: rso:RSp0106 molybdate-binding periplasmic signal peptide protein; molybdenum ABC transporter substrate-binding protein 542739..543524 Ralstonia pickettii 12D 8021653 YP_002983894.1 CDS Rpic12D_3966 NC_012857.1 543529 544827 R PFAM: major facilitator superfamily MFS_1; KEGG: rso:RS03015 transport transmembrane protein; major facilitator superfamily protein complement(543529..544827) Ralstonia pickettii 12D 8021654 YP_002983895.1 CDS Rpic12D_3967 NC_012857.1 544989 545630 D PFAM: regulatory protein TetR; KEGG: rso:RS03014 transcription regulator protein; TetR family transcriptional regulator 544989..545630 Ralstonia pickettii 12D 8021655 YP_002983896.1 CDS Rpic12D_3968 NC_012857.1 545762 546733 D PFAM: ATPase associated with various cellular activities AAA_3; ATPase AAA; SMART: AAA ATPase; KEGG: rso:RS03013 hypothetical protein; ATPase 545762..546733 Ralstonia pickettii 12D 8021656 YP_002983897.1 CDS Rpic12D_3969 NC_012857.1 546746 547819 D PFAM: protein of unknown function DUF58; KEGG: rso:RS03012 hypothetical protein; hypothetical protein 546746..547819 Ralstonia pickettii 12D 8021657 YP_002983898.1 CDS Rpic12D_3970 NC_012857.1 547816 549840 D PFAM: transglutaminase; SMART: transglutaminase; KEGG: rso:RS03011 hypothetical protein; transglutaminase 547816..549840 Ralstonia pickettii 12D 8021658 YP_002983899.1 CDS Rpic12D_3971 NC_012857.1 550353 551423 D KEGG: rso:RS03006 lipoprotein; lipoprotein 550353..551423 Ralstonia pickettii 12D 8021659 YP_002983900.1 CDS Rpic12D_3972 NC_012857.1 551518 552705 R TIGRFAM: AcnD-accessory protein PrpF; PFAM: protein of unknown function DUF453; KEGG: rso:RS03003 hypothetical protein; AcnD-accessory protein PrpF complement(551518..552705) Ralstonia pickettii 12D 8021660 YP_002983901.1 CDS Rpic12D_3973 NC_012857.1 552702 555299 R Catalyzes the conversion of citrate to isocitrate; aconitate hydratase complement(552702..555299) Ralstonia pickettii 12D 8021661 YP_002983902.1 CDS Rpic12D_3974 NC_012857.1 555615 556784 R catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity; methylcitrate synthase complement(555615..556784) Ralstonia pickettii 12D 8021662 YP_002983903.1 CDS prpB NC_012857.1 556821 557717 R catalyzes the formation of pyruvate and succinate from 2-methylisocitrate; 2-methylisocitrate lyase complement(556821..557717) Ralstonia pickettii 12D 8021663 YP_002983904.1 CDS Rpic12D_3976 NC_012857.1 557911 559857 D KEGG: rso:RSp0123 propionate catabolism operon regulatory transcription regulator protein; TIGRFAM: propionate catabolism operon regulatory protein PrpR; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; Propionate catabolism activator domain protein; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; PAS domain containing protein; Fis family proprionate catabolism activator 557911..559857 Ralstonia pickettii 12D 8021664 YP_002983905.1 CDS Rpic12D_3977 NC_012857.1 559971 560666 D PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: reu:Reut_B4062 metal-dependent phosphohydrolase; metal dependent phosphohydrolase 559971..560666 Ralstonia pickettii 12D 8021665 YP_002983906.1 CDS Rpic12D_3978 NC_012857.1 560907 562253 D KEGG: rfr:Rfer_0005 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase 560907..562253 Ralstonia pickettii 12D 8021666 YP_002983907.1 CDS Rpic12D_3979 NC_012857.1 562276 562845 R PFAM: isochorismatase hydrolase; KEGG: reu:Reut_B4618 isochorismatase hydrolase; isochorismatase hydrolase complement(562276..562845) Ralstonia pickettii 12D 8021667 YP_002983908.1 CDS Rpic12D_3980 NC_012857.1 563054 564361 D PFAM: chloride channel core; KEGG: bur:Bcep18194_A4091 Cl-channel, voltage gated; chloride channel core 563054..564361 Ralstonia pickettii 12D 8021668 YP_002983909.1 CDS Rpic12D_3981 NC_012857.1 564413 564892 R PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: reu:Reut_B4637 3-demethylubiquinone-9 3-methyltransferase; 3-demethylubiquinone-9 3-methyltransferase complement(564413..564892) Ralstonia pickettii 12D 8021669 YP_002983910.1 CDS Rpic12D_3982 NC_012857.1 565169 565291 D hypothetical protein 565169..565291 Ralstonia pickettii 12D 8021670 YP_002983911.1 CDS Rpic12D_3983 NC_012857.1 565352 566206 R KEGG: rso:RS02998 lipoprotein transmembrane; lipoprotein transmembrane complement(565352..566206) Ralstonia pickettii 12D 8021671 YP_002983912.1 CDS Rpic12D_3985 NC_012857.1 567107 568078 D PFAM: DNA topoisomerase type IA zn finger domain protein; restriction endonuclease; KEGG: cti:pRALTA_0076 endonuclease, type II restriction enzyme; DNA topoisomerase type IA zn finger domain-containing protein 567107..568078 Ralstonia pickettii 12D 8021673 YP_002983913.1 CDS Rpic12D_3986 NC_012857.1 568185 569081 D PFAM: DEAD/DEAH box helicase; SMART: DEAD-like helicases; KEGG: ses:SARI_00228 hypothetical protein; DEAD/DEAH box helicase 568185..569081 Ralstonia pickettii 12D 8021674 YP_002983914.1 CDS Rpic12D_3987 NC_012857.1 569244 569747 D hypothetical protein 569244..569747 Ralstonia pickettii 12D 8021675 YP_002983915.1 CDS Rpic12D_3988 NC_012857.1 569879 570919 R KEGG: gbm:Gbem_1911 hypothetical protein; hypothetical protein complement(569879..570919) Ralstonia pickettii 12D 8021676 YP_002983916.1 CDS Rpic12D_3989 NC_012857.1 571344 571622 D KEGG: rso:RSc3434 hypothetical protein; hypothetical protein 571344..571622 Ralstonia pickettii 12D 8021677 YP_002983917.1 CDS Rpic12D_3991 NC_012857.1 572346 573416 R KEGG: rso:RS02986 hypothetical protein; hypothetical protein complement(572346..573416) Ralstonia pickettii 12D 8021679 YP_002983918.1 CDS Rpic12D_3992 NC_012857.1 573702 575873 D KEGG: dsy:DSY1020 hypothetical protein; TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; PFAM: EAL domain protein; phosphotransferase system EIIC; SMART: EAL domain protein; PTS system lactose/cellobiose family transporter subunit IIC 573702..575873 Ralstonia pickettii 12D 8021680 YP_002983919.1 CDS Rpic12D_3993 NC_012857.1 575889 576488 R KEGG: hypothetical protein; hypothetical protein complement(575889..576488) Ralstonia pickettii 12D 8021681 YP_002983920.1 CDS Rpic12D_3995 NC_012857.1 577719 578636 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: bur:Bcep18194_C6931 hypothetical protein; hypothetical protein 577719..578636 Ralstonia pickettii 12D 8021683 YP_002983921.1 CDS Rpic12D_3996 NC_012857.1 578668 579594 R KEGG: rso:RS02988 hypothetical protein; hypothetical protein complement(578668..579594) Ralstonia pickettii 12D 8021684 YP_002983922.1 CDS Rpic12D_3997 NC_012857.1 579859 580677 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 579859..580677 Ralstonia pickettii 12D 8021685 YP_002983923.1 CDS Rpic12D_3998 NC_012857.1 580787 581701 R PFAM: alpha/beta hydrolase fold; KEGG: bcm:Bcenmc03_3335 alpha/beta hydrolase fold; alpha/beta hydrolase complement(580787..581701) Ralstonia pickettii 12D 8021686 YP_002983924.1 CDS Rpic12D_3999 NC_012857.1 581811 582302 D PFAM: helix-turn-helix HxlR type; KEGG: bcm:Bcenmc03_3334 HxlR family transcriptional regulator; HxlR family transcriptional regulator 581811..582302 Ralstonia pickettii 12D 8021687 YP_002983925.1 CDS Rpic12D_4000 NC_012857.1 582402 582521 R KEGG: reu:Reut_A0606 hypothetical protein; hypothetical protein complement(582402..582521) Ralstonia pickettii 12D 8021688 YP_002983926.1 CDS Rpic12D_4001 NC_012857.1 582562 582720 R hypothetical protein complement(582562..582720) Ralstonia pickettii 12D 8021689 YP_002983927.1 CDS Rpic12D_4002 NC_012857.1 582863 583798 R PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_C6950 transcriptional regulator; AraC family transcriptional regulator complement(582863..583798) Ralstonia pickettii 12D 8021690 YP_002983928.1 CDS Rpic12D_4003 NC_012857.1 583899 584585 D PFAM: ThiJ/PfpI domain protein; KEGG: bur:Bcep18194_C6949 ThiJ/PfpI family protein; ThiJ/PfpI domain-containing protein 583899..584585 Ralstonia pickettii 12D 8021691 YP_002983929.1 CDS Rpic12D_4004 NC_012857.1 584621 585460 D enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 584621..585460 Ralstonia pickettii 12D 8021692 YP_002983930.1 CDS Rpic12D_4005 NC_012857.1 585466 585921 R PFAM: protein of unknown function DUF1311; KEGG: eca:ECA0765 hypothetical protein; hypothetical protein complement(585466..585921) Ralstonia pickettii 12D 8021693 YP_002983931.1 CDS Rpic12D_4008 NC_012857.1 586656 587516 D KEGG: rme:Rmet_4636 hypothetical protein; hypothetical protein 586656..587516 Ralstonia pickettii 12D 8021696 YP_002983932.1 CDS Rpic12D_4009 NC_012857.1 587533 588042 R PFAM: protein of unknown function DUF1697; KEGG: bja:bll4334 hypothetical protein; hypothetical protein complement(587533..588042) Ralstonia pickettii 12D 8021697 YP_002983933.1 CDS Rpic12D_4010 NC_012857.1 588242 588670 D KEGG: rso:RSc3150 transmembrane protein; transmembrane protein 588242..588670 Ralstonia pickettii 12D 8021698 YP_002983934.1 CDS Rpic12D_4011 NC_012857.1 588858 590237 D Enables the enzymatic reduction of mercuric ions to elemental mercury; mercuric reductase 588858..590237 Ralstonia pickettii 12D 8021699 YP_002983935.1 CDS Rpic12D_4012 NC_012857.1 590315 591397 R PFAM: sodium/calcium exchanger membrane region; KEGG: reu:Reut_B4399 sodium/calcium exchanger membrane region; sodium/calcium exchanger membrane protein complement(590315..591397) Ralstonia pickettii 12D 8021700 YP_002983936.1 CDS Rpic12D_4013 NC_012857.1 591521 592375 R KEGG: rso:RS01997 signal peptide protein; signal peptide protein complement(591521..592375) Ralstonia pickettii 12D 8021701 YP_002983937.1 CDS Rpic12D_4014 NC_012857.1 592830 593285 D hypothetical protein 592830..593285 Ralstonia pickettii 12D 8021702 YP_002983938.1 CDS Rpic12D_4016 NC_012857.1 593507 594400 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bcm:Bcenmc03_3757 LysR family transcriptional regulator; LysR family transcriptional regulator complement(593507..594400) Ralstonia pickettii 12D 8021704 YP_002983939.1 CDS Rpic12D_4017 NC_012857.1 594487 595263 D PFAM: NAD(P)H dehydrogenase (quinone); KEGG: spe:Spro_2460 ribosyldihydronicotinamide dehydrogenase (quinone); ribosyldihydronicotinamide dehydrogenase 594487..595263 Ralstonia pickettii 12D 8021705 YP_002983940.1 CDS Rpic12D_4018 NC_012857.1 595373 596155 D PFAM: protein of unknown function DUF81; KEGG: rso:RS04702 hypothetical protein; hypothetical protein 595373..596155 Ralstonia pickettii 12D 8021706 YP_002983941.1 CDS Rpic12D_4019 NC_012857.1 596188 596583 D PFAM: carboxymuconolactone decarboxylase; KEGG: bam:Bamb_5410 carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 596188..596583 Ralstonia pickettii 12D 8021707 YP_002983942.1 CDS Rpic12D_4020 NC_012857.1 596605 596823 D hypothetical protein 596605..596823 Ralstonia pickettii 12D 8021708 YP_002983943.1 CDS Rpic12D_4021 NC_012857.1 596836 597645 D PFAM: alpha/beta hydrolase fold; KEGG: bpy:Bphyt_4082 alpha/beta hydrolase fold; alpha/beta hydrolase 596836..597645 Ralstonia pickettii 12D 8021709 YP_002983944.1 CDS Rpic12D_4022 NC_012857.1 597785 598288 R PFAM: thioesterase superfamily protein; KEGG: rso:RS05225 acyl-CoA thioester hydrolase-related protein; thioesterase superfamily protein complement(597785..598288) Ralstonia pickettii 12D 8021710 YP_002983945.1 CDS Rpic12D_4023 NC_012857.1 598463 598858 D KEGG: har:HEAR1579 hypothetical protein; hypothetical protein 598463..598858 Ralstonia pickettii 12D 8021711 YP_002983946.1 CDS Rpic12D_4024 NC_012857.1 598955 599296 D KEGG: bmj:BMULJ_06269 hypothetical protein; hypothetical protein 598955..599296 Ralstonia pickettii 12D 8021712 YP_002983947.1 CDS Rpic12D_4025 NC_012857.1 599306 600718 D PFAM: outer membrane efflux protein; KEGG: bvi:Bcep1808_3978 outer membrane efflux protein; outer membrane efflux protein 599306..600718 Ralstonia pickettii 12D 8021713 YP_002983948.1 CDS Rpic12D_4026 NC_012857.1 600721 602019 D PFAM: multicopper oxidase type 3; multicopper oxidase type 1; multicopper oxidase type 2; KEGG: bpd:BURPS668_A0714 multicopper oxidase family protein; multicopper oxidase type 3 600721..602019 Ralstonia pickettii 12D 8021714 YP_002983949.1 CDS Rpic12D_4027 NC_012857.1 602061 602549 D PFAM: blue (type 1) copper domain protein; KEGG: pna:Pnap_1260 blue (type 1) copper domain protein; blue (type 1) copper domain-containing protein 602061..602549 Ralstonia pickettii 12D 8021715 YP_002983950.1 CDS Rpic12D_4028 NC_012857.1 602585 602911 D KEGG: bmj:BMULJ_06272 hypothetical protein; hypothetical protein 602585..602911 Ralstonia pickettii 12D 8021716 YP_002983951.1 CDS Rpic12D_4029 NC_012857.1 603212 604309 D SMART: lipopolysaccharide-modifying protein; KEGG: ftm:FTM_1578 hypothetical protein; lipopolysaccharide-modifying protein 603212..604309 Ralstonia pickettii 12D 8021717 YP_002983952.1 CDS Rpic12D_4030 NC_012857.1 604436 605227 D PFAM: phytanoyl-CoA dioxygenase; KEGG: rso:RS05217 hydroxylase protein; phytanoyl-CoA dioxygenase 604436..605227 Ralstonia pickettii 12D 8021718 YP_002983953.1 CDS Rpic12D_4031 NC_012857.1 605325 605546 D KEGG: rso:RS05216 hypothetical protein; hypothetical protein 605325..605546 Ralstonia pickettii 12D 8021719 YP_002983954.1 CDS Rpic12D_4032 NC_012857.1 605770 606210 D KEGG: rso:RS05215 hypothetical protein; hypothetical protein 605770..606210 Ralstonia pickettii 12D 8021720 YP_002983955.1 CDS Rpic12D_4033 NC_012857.1 606230 607756 D PFAM: alkane oxygenase; KEGG: rso:RS05214 dioxygenase signal peptide protein; alkane oxygenase 606230..607756 Ralstonia pickettii 12D 8021721 YP_002983956.1 CDS Rpic12D_4034 NC_012857.1 607769 609403 R PFAM: peptidase dimerisation domain protein; peptidase M20; KEGG: dac:Daci_1258 peptidase dimerisation domain-containing protein; peptidase dimerisation domain-containing protein complement(607769..609403) Ralstonia pickettii 12D 8021722 YP_002983957.1 CDS Rpic12D_4035 NC_012857.1 609471 610388 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cti:RALTA_B2078 LysR family transcriptional regulator; LysR family transcriptional regulator 609471..610388 Ralstonia pickettii 12D 8021723 YP_002983958.1 CDS Rpic12D_4036 NC_012857.1 610405 611886 R Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase complement(610405..611886) Ralstonia pickettii 12D 8021724 YP_002983959.1 CDS Rpic12D_4037 NC_012857.1 611934 612707 R TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: reh:H16_B2488 ABC-type transporter permease; polar amino acid ABC transporter permease complement(611934..612707) Ralstonia pickettii 12D 8021725 YP_002983960.1 CDS Rpic12D_4038 NC_012857.1 612704 613396 R TIGRFAM: polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: reh:H16_B2489 ABC-type transporter permease; polar amino acid ABC transporter permease complement(612704..613396) Ralstonia pickettii 12D 8021726 YP_002983961.1 CDS Rpic12D_4039 NC_012857.1 613468 614355 R PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: reh:H16_B2490 ABC-type transporter periplasmic component: PAAT family; family 3 extracellular solute-binding protein complement(613468..614355) Ralstonia pickettii 12D 8021727 YP_002983962.1 CDS Rpic12D_4041 NC_012857.1 616454 616960 D KEGG: reu:Reut_B3507 hypothetical protein; hypothetical protein 616454..616960 Ralstonia pickettii 12D 8021729 YP_002983963.1 CDS Rpic12D_4042 NC_012857.1 616980 618365 R PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: rso:RS05203 two-component transmembrane sensor histidine kinase transcription regulator protein; histidine kinase complement(616980..618365) Ralstonia pickettii 12D 8021730 YP_002983964.1 CDS Rpic12D_4043 NC_012857.1 618591 619343 R PFAM: methyltransferase type 11; UbiE/COQ5 methyltransferase; methyltransferase type 12; KEGG: afe:Lferr_0774 methyltransferase type 11; type 11 methyltransferase complement(618591..619343) Ralstonia pickettii 12D 8021731 YP_002983965.1 CDS Rpic12D_4044 NC_012857.1 619462 620382 R PFAM: amidohydrolase 2; KEGG: rso:RS05190 hydrolase transmembrane protein; amidohydrolase 2 complement(619462..620382) Ralstonia pickettii 12D 8021732 YP_002983966.1 CDS Rpic12D_4045 NC_012857.1 620438 621685 R PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: rso:RS05189 metabolite transporter; major facilitator superfamily protein complement(620438..621685) Ralstonia pickettii 12D 8021733 YP_002983967.1 CDS Rpic12D_4046 NC_012857.1 621821 624643 R KEGG: rso:RS05188 maltooligosyl trehalose synthase transmembrane protein; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; malto-oligosyltrehalose synthase complement(621821..624643) Ralstonia pickettii 12D 8021734 YP_002983968.1 CDS Rpic12D_4047 NC_012857.1 624640 626922 R KEGG: rso:RS05187 4-alpha-glucanotransferase (amylomaltase) protein; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77; 4-alpha-glucanotransferase complement(624640..626922) Ralstonia pickettii 12D 8021735 YP_002983969.1 CDS Rpic12D_4048 NC_012857.1 626961 628802 R KEGG: rso:RS05186 maltooligosyl trehalose trehalohydrolase protein; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; SMART: alpha amylase catalytic sub domain; malto-oligosyltrehalose trehalohydrolase complement(626961..628802) Ralstonia pickettii 12D 8021736 YP_002983970.1 CDS Rpic12D_4049 NC_012857.1 628799 631099 R KEGG: rso:RSp0238 glycogen operon protein GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; glycogen debranching protein GlgX complement(628799..631099) Ralstonia pickettii 12D 8021737 YP_002983971.1 CDS Rpic12D_4050 NC_012857.1 631691 633997 R catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein complement(631691..633997) Ralstonia pickettii 12D 8021738 YP_002983972.1 CDS Rpic12D_4051 NC_012857.1 633994 637488 R KEGG: rso:RS05183 hypothetical protein; TIGRFAM: trehalose synthase; trehalose synthase-fused maltokinase; PFAM: alpha amylase catalytic region; aminoglycoside phosphotransferase; SMART: alpha amylase catalytic sub domain; trehalose synthase complement(633994..637488) Ralstonia pickettii 12D 8021739 YP_002983973.1 CDS Rpic12D_4052 NC_012857.1 637485 641075 R PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rso:RS05182 alpha-amylase-related protein; alpha amylase complement(637485..641075) Ralstonia pickettii 12D 8021740 YP_002983974.1 CDS glgA NC_012857.1 641107 642738 R catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase complement(641107..642738) Ralstonia pickettii 12D 8021741 YP_002983975.1 CDS Rpic12D_4054 NC_012857.1 643141 643704 D KEGG: rso:RSp0245 alkyl hydroperoxide reductase subunit C; TIGRFAM: peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen; redoxin; peroxiredoxin 643141..643704 Ralstonia pickettii 12D 8021742 YP_002983976.1 CDS Rpic12D_4055 NC_012857.1 643830 645404 D TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rso:RSp0246 alkyl hydroperoxide reductase subunit F; alkyl hydroperoxide reductase 643830..645404 Ralstonia pickettii 12D 8021743 YP_002983977.1 CDS Rpic12D_4056 NC_012857.1 645482 646369 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: pap:PSPA7_2742 transcriptional regulator; LysR family transcriptional regulator complement(645482..646369) Ralstonia pickettii 12D 8021744 YP_002983978.1 CDS Rpic12D_4057 NC_012857.1 647004 647459 D PFAM: ferric-uptake regulator; KEGG: rso:RSp0247 ferric uptake transcriptional (FUR)-like transcription regulator protein; Fur family ferric uptake regulator 647004..647459 Ralstonia pickettii 12D 8021745 YP_002983979.1 CDS Rpic12D_4058 NC_012857.1 647556 647807 D KEGG: rso:RS03718 hypothetical protein; hypothetical protein 647556..647807 Ralstonia pickettii 12D 8021746 YP_002983980.1 CDS Rpic12D_4059 NC_012857.1 647817 648122 R KEGG: rso:RS03717 hypothetical protein; hypothetical protein complement(647817..648122) Ralstonia pickettii 12D 8021747 YP_002983981.1 CDS Rpic12D_4060 NC_012857.1 648229 648549 R KEGG: rso:RS03716 transmembrane protein; transmembrane protein complement(648229..648549) Ralstonia pickettii 12D 8021748 YP_002983982.1 CDS Rpic12D_4061 NC_012857.1 648546 650411 R TIGRFAM: ferrous iron transporter B; small GTP-binding protein; PFAM: Ferrous iron transporter B domain protein; GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport B domain protein; KEGG: rso:RSp0251 ferrous iron transport B transmembrane protein; ferrous iron transporter B complement(648546..650411) Ralstonia pickettii 12D 8021749 YP_002983983.1 CDS Rpic12D_4062 NC_012857.1 650458 650766 R PFAM: FeoA family protein; KEGG: rso:RS03714 hypothetical protein; FeoA family protein complement(650458..650766) Ralstonia pickettii 12D 8021750 YP_002983984.1 CDS Rpic12D_4063 NC_012857.1 651454 655005 D KEGG: rso:RS03712 hypothetical protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; hypothetical protein; PAS fold domain protein; histidine kinase HAMP region domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; histidine kinase HAMP region domain protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 651454..655005 Ralstonia pickettii 12D 8021751 YP_002983985.1 CDS Rpic12D_4064 NC_012857.1 655027 656616 R KEGG: rso:RS03711 methyl-accepting chemotaxis transducer transmembrane protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; PAS domain containing protein; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor complement(655027..656616) Ralstonia pickettii 12D 8021752 YP_002983986.1 CDS Rpic12D_4065 NC_012857.1 656833 657084 D KEGG: rso:RS03710 hypothetical protein; hypothetical protein 656833..657084 Ralstonia pickettii 12D 8021753 YP_002983987.1 CDS Rpic12D_4066 NC_012857.1 657098 657925 R PFAM: FAD-binding 9 siderophore-interacting domain protein; oxidoreductase FAD-binding domain protein; Siderophore-interacting protein; KEGG: rso:RS03709 hypothetical protein; FAD-binding 9 siderophore-interacting domain-containing protein complement(657098..657925) Ralstonia pickettii 12D 8021754 YP_002983988.1 CDS Rpic12D_4067 NC_012857.1 658026 658685 R PFAM: transcriptional regulator PadR family protein; KEGG: rso:RS03708 hypothetical protein; PadR family transcriptional regulator complement(658026..658685) Ralstonia pickettii 12D 8021755 YP_002983989.1 CDS Rpic12D_4068 NC_012857.1 658798 659313 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rme:Rmet_3441 MarR family transcriptional regulator; MarR family transcriptional regulator complement(658798..659313) Ralstonia pickettii 12D 8021756 YP_002983990.1 CDS Rpic12D_4069 NC_012857.1 659392 659889 D TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: carboxymuconolactone decarboxylase; KEGG: afe:Lferr_1680 alkylhydroperoxidase like protein, AhpD family; alkylhydroperoxidase-like protein 659392..659889 Ralstonia pickettii 12D 8021757 YP_002983991.1 CDS Rpic12D_4070 NC_012857.1 659886 660335 D PFAM: GCN5-related N-acetyltransferase; KEGG: rme:Rmet_3439 GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 659886..660335 Ralstonia pickettii 12D 8021758 YP_002983992.1 CDS Rpic12D_4071 NC_012857.1 660332 660958 D PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: cti:RALTA_B1550 (acyl-carrier protein) phosphodiesterase; NAD(P)H dehydrogenase (quinone) 660332..660958 Ralstonia pickettii 12D 8021759 YP_002983993.1 CDS Rpic12D_4072 NC_012857.1 661024 661671 R KEGG: rso:RSp0259 pyrrolidone-carboxylate peptidase protein; TIGRFAM: pyrrolidone-carboxylate peptidase; PFAM: peptidase C15 pyroglutamyl peptidase I; pyrrolidone-carboxylate peptidase complement(661024..661671) Ralstonia pickettii 12D 8021760 YP_002983994.1 CDS Rpic12D_4073 NC_012857.1 661750 662169 R PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rso:RS03706 transcription regulator protein; MarR family transcriptional regulator complement(661750..662169) Ralstonia pickettii 12D 8021761 YP_002983995.1 CDS Rpic12D_4074 NC_012857.1 662255 663853 R KEGG: reh:H16_B1494 hypothetical protein; hypothetical protein complement(662255..663853) Ralstonia pickettii 12D 8021762 YP_002983996.1 CDS Rpic12D_4075 NC_012857.1 664045 664860 D PFAM: penicillin-binding protein transpeptidase; KEGG: pla:Plav_3016 beta-lactamase; beta-lactamase 664045..664860 Ralstonia pickettii 12D 8021763 YP_002983997.1 CDS Rpic12D_4076 NC_012857.1 665027 665470 D hypothetical protein 665027..665470 Ralstonia pickettii 12D 8021764 YP_002983998.1 CDS mdoD NC_012857.1 665522 667135 R involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans; glucan biosynthesis protein D complement(665522..667135) Ralstonia pickettii 12D 8021765 YP_002983999.1 CDS Rpic12D_4078 NC_012857.1 667333 668475 D PFAM: beta-lactamase; KEGG: bra:BRADO6186 beta-lactamase; beta-lactamase 667333..668475 Ralstonia pickettii 12D 8021766 YP_002984000.1 CDS Rpic12D_4079 NC_012857.1 668506 668985 R PFAM: hypothetical protein; KEGG: rme:Rmet_0706 hypothetical protein; hypothetical protein complement(668506..668985) Ralstonia pickettii 12D 8021767 YP_002984001.1 CDS Rpic12D_4080 NC_012857.1 668999 671443 R PFAM: ABC transporter; ABC transporter transmembrane region; SMART: ATPase AAA; KEGG: rme:Rmet_0705 ABC transporter-related protein; ABC transporter complement(668999..671443) Ralstonia pickettii 12D 8021768 YP_002984002.1 CDS Rpic12D_4081 NC_012857.1 671595 674255 D catalyze the formation of cyanophycin which may act to store excess nitrogen; cyanophycin synthetase 671595..674255 Ralstonia pickettii 12D 8021769 YP_002984003.1 CDS Rpic12D_4082 NC_012857.1 674309 676876 D catalyze the formation of cyanophycin which may act to store excess nitrogen; cyanophycin synthetase 674309..676876 Ralstonia pickettii 12D 8021770 YP_002984004.1 CDS Rpic12D_4083 NC_012857.1 677426 678103 D PFAM: flavin reductase domain protein FMN-binding; KEGG: cvi:CV_3073 hypothetical protein; flavin reductase domain-containing protein 677426..678103 Ralstonia pickettii 12D 8021771 YP_002984005.1 CDS Rpic12D_4084 NC_012857.1 678100 678612 D PFAM: GCN5-related N-acetyltransferase; KEGG: rso:RS03701 acetyltransferase protein; N-acetyltransferase GCN5 678100..678612 Ralstonia pickettii 12D 8021772 YP_002984006.1 CDS Rpic12D_4085 NC_012857.1 678609 679625 R PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rso:RS05569 transcription regulator protein; AraC family transcriptional regulator complement(678609..679625) Ralstonia pickettii 12D 8021773 YP_002984007.1 CDS Rpic12D_4086 NC_012857.1 679791 680924 D PFAM: acyl-CoA dehydrogenase domain protein; acyl-CoA dehydrogenase type 2 domain; KEGG: rso:RS05570 acyl-CoA dehydrogenase oxidoreductase protein; acyl-CoA dehydrogenase domain-containing protein 679791..680924 Ralstonia pickettii 12D 8021774 YP_002984008.1 CDS Rpic12D_4087 NC_012857.1 680986 682680 D PFAM: AMP-dependent synthetase and ligase; KEGG: rso:RS05571 acetyl-coenzyme A synthetase; AMP-dependent synthetase and ligase 680986..682680 Ralstonia pickettii 12D 8021775 YP_002984009.1 CDS Rpic12D_4088 NC_012857.1 682753 684300 D TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: rso:RSp0650 methylmalonate-semialdehyde dehydrogenase oxidoreductase protein; methylmalonate-semialdehyde dehydrogenase 682753..684300 Ralstonia pickettii 12D 8021776 YP_002984010.1 CDS Rpic12D_4089 NC_012857.1 684320 685213 D KEGG: rso:RSp0649 3-hydroxyisobutyrate dehydrogenase oxidoreductase protein; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 3-hydroxyisobutyrate dehydrogenase 684320..685213 Ralstonia pickettii 12D 8021777 YP_002984011.1 CDS Rpic12D_4090 NC_012857.1 685213 686010 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 685213..686010 Ralstonia pickettii 12D 8021778 YP_002984012.1 CDS Rpic12D_4091 NC_012857.1 686007 687158 D PFAM: enoyl-CoA hydratase/isomerase; KEGG: rso:RS05575 enoyl-coenzyme A hydratase protein; enoyl-CoA hydratase/isomerase 686007..687158 Ralstonia pickettii 12D 8021779 YP_002984013.1 CDS Rpic12D_4092 NC_012857.1 687510 689279 D KEGG: pau:PA14_46540 hypothetical protein; hypothetical protein 687510..689279 Ralstonia pickettii 12D 8021780 YP_002984014.1 CDS Rpic12D_4093 NC_012857.1 689307 690800 R activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase complement(689307..690800) Ralstonia pickettii 12D 8021781 YP_002984015.1 CDS Rpic12D_4094 NC_012857.1 691283 692563 D PFAM: chloride channel core; KEGG: rso:RSc1803 hypothetical protein; chloride channel core 691283..692563 Ralstonia pickettii 12D 8021782 YP_002984016.1 CDS Rpic12D_4095 NC_012857.1 692602 693312 R PFAM: regulatory protein IclR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein IclR; KEGG: bph:Bphy_6026 IclR family transcriptional regulator; IclR family transcriptional regulator complement(692602..693312) Ralstonia pickettii 12D 8021783 YP_002984017.1 CDS Rpic12D_4096 NC_012857.1 693482 694180 D PFAM: dimethylmenaquinone methyltransferase; KEGG: bch:Bcen2424_5398 dimethylmenaquinone methyltransferase; dimethylmenaquinone methyltransferase 693482..694180 Ralstonia pickettii 12D 8021784 YP_002984018.1 CDS Rpic12D_4097 NC_012857.1 694180 695130 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: bch:Bcen2424_5397 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase 694180..695130 Ralstonia pickettii 12D 8021785 YP_002984019.1 CDS Rpic12D_4098 NC_012857.1 695130 696086 D PFAM: SMP-30/gluconolaconase/LRE domain protein; KEGG: bph:Bphy_6029 SMP-30/gluconolaconase/LRE domain-containing protein; SMP-30/gluconolaconase/LRE domain-containing protein 695130..696086 Ralstonia pickettii 12D 8021786 YP_002984020.1 CDS Rpic12D_4099 NC_012857.1 696149 697513 D PFAM: major facilitator superfamily MFS_1; KEGG: bph:Bphy_6030 major facilitator transporter; major facilitator superfamily protein 696149..697513 Ralstonia pickettii 12D 8021787 YP_002984021.1 CDS Rpic12D_4100 NC_012857.1 697590 698915 D PFAM: major facilitator superfamily MFS_1; KEGG: bph:Bphy_6035 major facilitator transporter; major facilitator superfamily protein 697590..698915 Ralstonia pickettii 12D 8021788 YP_002984022.1 CDS Rpic12D_4101 NC_012857.1 698951 699547 D PFAM: amidohydrolase 2; KEGG: bmj:BMULJ_03819 predicted metal-dependent hydrolase of the TIM-barrel fold; amidohydrolase 2 698951..699547 Ralstonia pickettii 12D 8021789 YP_002984023.1 CDS Rpic12D_4102 NC_012857.1 699780 701720 R PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: bcm:Bcenmc03_4466 peptidase S8 and S53 subtilisin kexin sedolisin; peptidase S8/S53 subtilisin kexin sedolisin complement(699780..701720) Ralstonia pickettii 12D 8021790 YP_002984024.1 CDS Rpic12D_4103 NC_012857.1 702013 703029 R PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: atc:AGR_L_1441 hypothetical protein; AraC family transcriptional regulator complement(702013..703029) Ralstonia pickettii 12D 8021791 YP_002984025.1 CDS Rpic12D_4104 NC_012857.1 703117 704634 R KEGG: rso:RS04801 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(703117..704634) Ralstonia pickettii 12D 8021792 YP_002984026.1 CDS Rpic12D_4105 NC_012857.1 704929 705123 D KEGG: rso:RS04800 hypothetical protein; hypothetical protein 704929..705123 Ralstonia pickettii 12D 8021793 YP_002984027.1 CDS Rpic12D_4106 NC_012857.1 705408 708041 D PFAM: protein of unknown function DUF470; protein of unknown function DUF472; protein of unknown function DUF471; KEGG: rso:RS04799 hypothetical protein; hypothetical protein 705408..708041 Ralstonia pickettii 12D 8021794 YP_002984028.1 CDS Rpic12D_4107 NC_012857.1 708038 709804 D PFAM: virulence factor family protein; KEGG: rso:RS04798 AcvB-like protein; virulence factor family protein 708038..709804 Ralstonia pickettii 12D 8021795 YP_002984029.1 CDS Rpic12D_4108 NC_012857.1 709864 711585 R PFAM: sulfate transporter; sulfate transporter/antisigma-factor antagonist STAS; xanthine/uracil/vitamin C permease; KEGG: rso:RS04796 sulfate transporter transmembrane protein; sulfate transporter complement(709864..711585) Ralstonia pickettii 12D 8021796 YP_002984030.1 CDS Rpic12D_4109 NC_012857.1 711665 712216 R KEGG: rso:RS04795 alanin-rich signal peptide protein; hypothetical protein complement(711665..712216) Ralstonia pickettii 12D 8021797 YP_002984031.1 CDS Rpic12D_4110 NC_012857.1 712426 713352 R PFAM: LysR substrate-binding; regulatory protein LysR; regulatory protein MarR; KEGG: reh:H16_B1766 transcriptional regulator, LysR-family; MarR family transcriptional regulator complement(712426..713352) Ralstonia pickettii 12D 8021798 YP_002984032.1 CDS Rpic12D_4111 NC_012857.1 713465 714226 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reh:H16_B1767 oxidoreductase; short chain dehydrogenase 713465..714226 Ralstonia pickettii 12D 8021799 YP_002984033.1 CDS Rpic12D_4112 NC_012857.1 714523 715164 D PFAM: YheO domain protein; KEGG: rso:RS04794 hypothetical protein; YheO domain-containing protein 714523..715164 Ralstonia pickettii 12D 8021800 YP_002984034.1 CDS Rpic12D_4113 NC_012857.1 715161 716138 D catalyzes the formation of 2-oxobutanoate from L-threonine or the formation of pyruvate from serine; serine/threonine dehydratase 715161..716138 Ralstonia pickettii 12D 8021801 YP_002984035.1 CDS Rpic12D_4114 NC_012857.1 716135 716524 D PFAM: endoribonuclease L-PSP; KEGG: rso:RS04792 hypothetical protein; endoribonuclease L-PSP 716135..716524 Ralstonia pickettii 12D 8021802 YP_002984036.1 CDS Rpic12D_4115 NC_012857.1 716676 717557 D PFAM: type IV pilus assembly PilZ; KEGG: reh:H16_A1321 hypothetical protein; type IV pilus assembly PilZ 716676..717557 Ralstonia pickettii 12D 8021803 YP_002984037.1 CDS Rpic12D_4116 NC_012857.1 717562 718446 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rso:RS04791 transcription regulator protein; LysR family transcriptional regulator complement(717562..718446) Ralstonia pickettii 12D 8021804 YP_002984038.1 CDS Rpic12D_4117 NC_012857.1 718562 718999 D PFAM: hypothetical protein; KEGG: rso:RS04790 hypothetical protein; hypothetical protein 718562..718999 Ralstonia pickettii 12D 8021805 YP_002984039.1 CDS Rpic12D_4118 NC_012857.1 719114 719755 D PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: rso:RS04789 transcription regulator protein; LuxR family transcriptional regulator 719114..719755 Ralstonia pickettii 12D 8021806 YP_002984040.1 CDS Rpic12D_4119 NC_012857.1 719773 719991 R KEGG: rso:RS04788 hypothetical protein; hypothetical protein complement(719773..719991) Ralstonia pickettii 12D 8021807 YP_002984041.1 CDS Rpic12D_4120 NC_012857.1 720249 720656 R KEGG: rme:Rmet_4996 hypothetical protein; hypothetical protein complement(720249..720656) Ralstonia pickettii 12D 8021808 YP_002984042.1 CDS Rpic12D_4121 NC_012857.1 720686 721084 R KEGG: rso:RS03031 hypothetical protein; hypothetical protein complement(720686..721084) Ralstonia pickettii 12D 8021809 YP_002984043.1 CDS Rpic12D_4122 NC_012857.1 721120 722148 R KEGG: rso:RS03032 periplasmic substrate-binding transmembrane protein; periplasmic substrate-binding transmembrane protein complement(721120..722148) Ralstonia pickettii 12D 8021810 YP_002984044.1 CDS Rpic12D_4123 NC_012857.1 722452 723348 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: rso:RS03033 transmembranee ABC transporter protein; binding-protein-dependent transporters inner membrane component complement(722452..723348) Ralstonia pickettii 12D 8021811 YP_002984045.1 CDS Rpic12D_4124 NC_012857.1 723338 724132 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: rso:RS03034 ABC transporter ATP-binding protein; ABC transporter complement(723338..724132) Ralstonia pickettii 12D 8021812 YP_002984046.1 CDS Rpic12D_4125 NC_012857.1 724189 724911 R PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: rso:RS03035 transcription regulator protein; GntR family transcriptional regulator complement(724189..724911) Ralstonia pickettii 12D 8021813 YP_002984047.1 CDS Rpic12D_4126 NC_012857.1 725058 727334 R KEGG: rso:RSp1505 nitric oxide reductase subunit B; nitric oxide reductase subunit B complement(725058..727334) Ralstonia pickettii 12D 8021814 YP_002984048.1 CDS Rpic12D_4127 NC_012857.1 727367 727657 R KEGG: rme:Rmet_4922 hypothetical protein; hypothetical protein complement(727367..727657) Ralstonia pickettii 12D 8021815 YP_002984049.1 CDS Rpic12D_4128 NC_012857.1 727931 729430 D KEGG: rso:RS03038 major anaerobically induced outer membrane transmembrane protein; TIGRFAM: nitrite reductase, copper-containing; PFAM: multicopper oxidase type 3; blue (type 1) copper domain protein; multicopper oxidase type 2; cytochrome C class I; nitrite reductase 727931..729430 Ralstonia pickettii 12D 8021816 YP_002984050.1 CDS Rpic12D_4129 NC_012857.1 729447 730238 D PFAM: protein of unknown function DUF323; KEGG: rso:RS03039 signal peptide protein; hypothetical protein 729447..730238 Ralstonia pickettii 12D 8021817 YP_002984051.1 CDS Rpic12D_4130 NC_012857.1 730235 730819 D PFAM: electron transporter SCO1/SenC; KEGG: rso:RS03040 signal peptide protein; electron transporter SCO1/SenC 730235..730819 Ralstonia pickettii 12D 8021818 YP_002984052.1 CDS Rpic12D_4131 NC_012857.1 730838 731686 R PFAM: fumarylacetoacetate hydrolase; KEGG: reh:H16_A0072 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase complement(730838..731686) Ralstonia pickettii 12D 8021819 YP_002984053.1 CDS Rpic12D_4132 NC_012857.1 731683 732570 R PFAM: GntR family transcriptional regulator; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: reh:H16_A0071 transcriptional regulator, GntR-family; GntR family transcriptional regulator complement(731683..732570) Ralstonia pickettii 12D 8021820 YP_002984054.1 CDS Rpic12D_4133 NC_012857.1 732681 733988 D PFAM: major facilitator superfamily MFS_1; KEGG: bph:Bphy_4990 major facilitator transporter; major facilitator superfamily protein 732681..733988 Ralstonia pickettii 12D 8021821 YP_002984055.1 CDS Rpic12D_4134 NC_012857.1 734151 734879 D PFAM: Asp/Glu/hydantoin racemase; KEGG: reu:Reut_A0046 Asp/Glu racemase; Asp/Glu/hydantoin racemase 734151..734879 Ralstonia pickettii 12D 8021822 YP_002984056.1 CDS Rpic12D_4135 NC_012857.1 734901 736316 D catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position; phenylhydantoinase 734901..736316 Ralstonia pickettii 12D 8021823 YP_002984057.1 CDS Rpic12D_4136 NC_012857.1 736347 737084 D PFAM: Asp/Glu/hydantoin racemase; KEGG: rme:Rmet_3885 Asp/Glu racemase; Asp/Glu/hydantoin racemase 736347..737084 Ralstonia pickettii 12D 8021824 YP_002984058.1 CDS Rpic12D_4138 NC_012857.1 737760 738464 R PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; KEGG: bra:BRADO5261 transcriptional regulator; Crp/Fnr family transcriptional regulator complement(737760..738464) Ralstonia pickettii 12D 8021826 YP_002984059.1 CDS Rpic12D_4139 NC_012857.1 738457 739092 R PFAM: DSBA oxidoreductase; KEGG: bcm:Bcenmc03_4802 DsbA oxidoreductase; DSBA oxidoreductase complement(738457..739092) Ralstonia pickettii 12D 8021827 YP_002984060.1 CDS Rpic12D_4140 NC_012857.1 739102 739776 R KEGG: fal:FRAAL3149 acetyl-CoA:acetoacetyl-CoA transferase subunit beta; TIGRFAM: 3-oxoacid CoA-transferase subunit beta; PFAM: coenzyme A transferase; 3-oxoacid CoA-transferase subunit B complement(739102..739776) Ralstonia pickettii 12D 8021828 YP_002984061.1 CDS Rpic12D_4141 NC_012857.1 739805 740569 R PFAM: coenzyme A transferase; KEGG: cbt:CLH_1917 CoA-transferase, subunit alpha; coenzyme A transferase complement(739805..740569) Ralstonia pickettii 12D 8021829 YP_002984062.1 CDS Rpic12D_4142 NC_012857.1 740808 742025 D PFAM: sodium/hydrogen exchanger; KEGG: rso:RS03045 cation-efflux system transmembrane protein; sodium/hydrogen exchanger 740808..742025 Ralstonia pickettii 12D 8021830 YP_002984063.1 CDS Rpic12D_4143 NC_012857.1 742069 742623 D PFAM: NADPH-dependent FMN reductase; KEGG: rso:RS03046 hypothetical protein; NADPH-dependent FMN reductase 742069..742623 Ralstonia pickettii 12D 8021831 YP_002984064.1 CDS Rpic12D_4144 NC_012857.1 743035 743718 R hypothetical protein complement(743035..743718) Ralstonia pickettii 12D 8021832 YP_002984065.1 CDS Rpic12D_4145 NC_012857.1 744008 744715 D PFAM: GCN5-related N-acetyltransferase; KEGG: bav:BAV1624 acetyltransferase; N-acetyltransferase GCN5 744008..744715 Ralstonia pickettii 12D 8021833 YP_002984066.1 CDS Rpic12D_4146 NC_012857.1 744725 746338 R KEGG: rso:RS03125 hypothetical protein; hypothetical protein complement(744725..746338) Ralstonia pickettii 12D 8021834 YP_002984067.1 CDS Rpic12D_4147 NC_012857.1 746497 747009 R KEGG: rso:RS03126 hypothetical protein; hypothetical protein complement(746497..747009) Ralstonia pickettii 12D 8021835 YP_002984068.1 CDS Rpic12D_4148 NC_012857.1 747268 748089 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: sml:Smlt2573 ATP-binding ABC transporter protein; ABC transporter 747268..748089 Ralstonia pickettii 12D 8021836 YP_002984069.1 CDS Rpic12D_4149 NC_012857.1 748073 748903 D PFAM: binding-protein-dependent transporters inner membrane component; KEGG: sml:Smlt2572 transmembrane permease ABC transporter protein; binding-protein-dependent transporters inner membrane component 748073..748903 Ralstonia pickettii 12D 8021837 YP_002984070.1 CDS Rpic12D_4150 NC_012857.1 748937 749941 D PFAM: NMT1/THI5 like domain protein; substrate-binding region of ABC-type glycine betaine transporter; SMART: extracellular solute-binding protein family 3; KEGG: mlo:mll6979 ABC transporter periplasmic substrate-binding protein; NMT1/THI5 like domain-containing protein 748937..749941 Ralstonia pickettii 12D 8021838 YP_002984071.1 CDS Rpic12D_4151 NC_012857.1 749962 750756 D PFAM: regulatory protein IclR; transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: bpy:Bphyt_4012 IclR family transcriptional regulator; IclR family transcriptional regulator 749962..750756 Ralstonia pickettii 12D 8021839 YP_002984072.1 CDS Rpic12D_4152 NC_012857.1 750828 752015 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bpy:Bphyt_4014 L-carnitine dehydratase/bile acid-inducible protein F; L-carnitine dehydratase/bile acid-inducible protein F 750828..752015 Ralstonia pickettii 12D 8021840 YP_002984073.1 CDS Rpic12D_4153 NC_012857.1 752018 752872 D KEGG: bpy:Bphyt_4013 citrate synthase; citrate synthase 752018..752872 Ralstonia pickettii 12D 8021841 YP_002984074.1 CDS Rpic12D_4154 NC_012857.1 752869 753765 D PFAM: SMP-30/gluconolaconase/LRE domain protein; KEGG: pol:Bpro_4512 gluconolactonase; SMP-30/gluconolaconase/LRE domain-containing protein 752869..753765 Ralstonia pickettii 12D 8021842 YP_002984075.1 CDS Rpic12D_4155 NC_012857.1 754626 754943 D with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems; transcriptional activator FlhD 754626..754943 Ralstonia pickettii 12D 8021843 YP_002984076.1 CDS Rpic12D_4156 NC_012857.1 755021 755581 D With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems; transcriptional activator FlhC 755021..755581 Ralstonia pickettii 12D 8021844 YP_002984077.1 CDS Rpic12D_4157 NC_012857.1 756122 756982 D With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA 756122..756982 Ralstonia pickettii 12D 8021845 YP_002984078.1 CDS motB NC_012857.1 757183 758130 D with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB 757183..758130 Ralstonia pickettii 12D 8021846 YP_002984079.1 CDS Rpic12D_4159 NC_012857.1 758156 758569 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: rso:RSp1409 chemotaxis response regulator transcription regulator protein; response regulator receiver protein 758156..758569 Ralstonia pickettii 12D 8021847 YP_002984080.1 CDS Rpic12D_4160 NC_012857.1 758588 760762 D PFAM: CheY binding; CheW domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; ATP-binding region ATPase domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; KEGG: rso:RSp1408 chemotaxis sensor histidine kinase transcription regulator protein; CheA signal transduction histidine kinase 758588..760762 Ralstonia pickettii 12D 8021848 YP_002984081.1 CDS Rpic12D_4161 NC_012857.1 760843 761334 D PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: rso:RSp1407 chemotaxis protein CheW; CheW protein 760843..761334 Ralstonia pickettii 12D 8021849 YP_002984082.1 CDS Rpic12D_4162 NC_012857.1 761458 763305 D PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: rso:RSp1406 methyl-accepting chemotaxis I; methyl-accepting chemotaxis sensory transducer 761458..763305 Ralstonia pickettii 12D 8021850 YP_002984083.1 CDS Rpic12D_4163 NC_012857.1 763530 765434 D PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; KEGG: cti:RALTA_B0243 MCP: methyl-accepting chemotaxis protein, chemotaxis sensory transducer; methyl-accepting chemotaxis sensory transducer 763530..765434 Ralstonia pickettii 12D 8021851 YP_002984084.1 CDS Rpic12D_4164 NC_012857.1 765538 766419 D KEGG: rso:RSp1405 chemotaxis protein methyltransferase; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type; CheR-type MCP methyltransferase 765538..766419 Ralstonia pickettii 12D 8021852 YP_002984085.1 CDS Rpic12D_4165 NC_012857.1 766416 767126 D stimulates methylation of MCP proteins; PFAM: CheD family protein; KEGG: rso:RS02054 chemotaxis protein; protein CheD 766416..767126 Ralstonia pickettii 12D 8021853 YP_002984086.1 CDS Rpic12D_4166 NC_012857.1 767150 768277 D regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 767150..768277 Ralstonia pickettii 12D 8021854 YP_002984087.1 CDS Rpic12D_4167 NC_012857.1 768427 768828 D PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: rso:RSp1402 chemotaxis response regulator transcription regulator protein; response regulator receiver protein 768427..768828 Ralstonia pickettii 12D 8021855 YP_002984088.1 CDS Rpic12D_4168 NC_012857.1 768828 769496 D cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation; chemotaxis regulator CheZ 768828..769496 Ralstonia pickettii 12D 8021856 YP_002984089.1 CDS Rpic12D_4169 NC_012857.1 769572 770612 R PFAM: ApbE family lipoprotein; KEGG: rso:RSp1366 thiamine biosynthesis ApbE transmembrane protein; ApbE family lipoprotein complement(769572..770612) Ralstonia pickettii 12D 8021857 YP_002984090.1 CDS Rpic12D_4170 NC_012857.1 770617 771039 R PFAM: cytochrome C class I; KEGG: rso:RS02091 lipoprotein; cytochrome C class I complement(770617..771039) Ralstonia pickettii 12D 8021858 YP_002984091.1 CDS Rpic12D_4171 NC_012857.1 771278 773227 D reduces nitrous oxide to nitrogen; nitrous-oxide reductase 771278..773227 Ralstonia pickettii 12D 8021859 YP_002984092.1 CDS Rpic12D_4172 NC_012857.1 773246 775909 D PFAM: FMN-binding domain protein; KEGG: rso:RSp1369 transmembrane regulatory NosR transcription regulator protein; nitrous oxide expression regulator, NosR 773246..775909 Ralstonia pickettii 12D 8021860 YP_002984093.1 CDS Rpic12D_4173 NC_012857.1 775906 777201 D PFAM: periplasmic copper-binding; SMART: carbohydrate-binding and sugar hydrolysis; Parallel beta-helix repeat; KEGG: rso:RSp1370 copper-binding periplasmic NosD signal peptide protein; periplasmic copper-binding protein 775906..777201 Ralstonia pickettii 12D 8021861 YP_002984094.1 CDS Rpic12D_4174 NC_012857.1 777179 778135 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: rme:Rmet_4914 ABC transporter; ABC transporter 777179..778135 Ralstonia pickettii 12D 8021862 YP_002984095.1 CDS Rpic12D_4175 NC_012857.1 778132 778956 D KEGG: rso:RSp1372 NosY transmembrane protein; NosY transmembrane protein 778132..778956 Ralstonia pickettii 12D 8021863 YP_002984096.1 CDS Rpic12D_4176 NC_012857.1 778953 779483 D PFAM: NosL family protein; KEGG: rme:Rmet_4912 NosL; NosL family protein 778953..779483 Ralstonia pickettii 12D 8021864 YP_002984097.1 CDS Rpic12D_4177 NC_012857.1 779486 780088 D KEGG: rme:Rmet_4911 hypothetical protein; hypothetical protein 779486..780088 Ralstonia pickettii 12D 8021865 YP_002984098.1 CDS Rpic12D_4178 NC_012857.1 780282 781445 D TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; KEGG: rso:RSp1394 flagellar biosynthetic FlhB transmembrane protein; flagellar biosynthetic protein FlhB 780282..781445 Ralstonia pickettii 12D 8021866 YP_002984099.1 CDS Rpic12D_4179 NC_012857.1 781739 783865 D TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; KEGG: rso:RSp1393 flagellar biosynthesis FlhA transmembrane protein; flagellar biosynthesis protein FlhA 781739..783865 Ralstonia pickettii 12D 8021867 YP_002984100.1 CDS flhF NC_012857.1 783862 785760 D positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF 783862..785760 Ralstonia pickettii 12D 8021868 YP_002984101.1 CDS Rpic12D_4181 NC_012857.1 785776 786567 D KEGG: rso:RS02067 hypothetical protein; hypothetical protein 785776..786567 Ralstonia pickettii 12D 8021869 YP_002984102.1 CDS fliA NC_012857.1 786576 787337 D sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor 786576..787337 Ralstonia pickettii 12D 8021870 YP_002984103.1 CDS Rpic12D_4183 NC_012857.1 787716 789143 D TIGRFAM: xanthine permease; uracil-xanthine permease; PFAM: xanthine/uracil/vitamin C permease; KEGG: rso:RSc2118 xanthine permease transmembrane protein; xanthine permease 787716..789143 Ralstonia pickettii 12D 8021871 YP_002984104.1 CDS Rpic12D_4184 NC_012857.1 789172 790254 R PFAM: aldose 1-epimerase; KEGG: bxe:Bxe_B2624 aldose 1-epimerase; aldose 1-epimerase complement(789172..790254) Ralstonia pickettii 12D 8021872 YP_002984105.1 CDS Rpic12D_4185 NC_012857.1 790251 791474 R PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bxe:Bxe_B2623 AraC family transcriptional regulator; AraC family transcriptional regulator complement(790251..791474) Ralstonia pickettii 12D 8021873 YP_002984106.1 CDS Rpic12D_4186 NC_012857.1 791744 792772 D KEGG: bxe:Bxe_B2621 ABC xylose transporter periplasmic ligand binding protein; TIGRFAM: D-xylose ABC transporter periplasmic substrate-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; D-xylose ABC transporter periplasmic substrate-binding protein 791744..792772 Ralstonia pickettii 12D 8021874 YP_002984107.1 CDS Rpic12D_4187 NC_012857.1 792854 794407 D with XylFH is part of the high affinity xylose ABC transporter; sugar ABC transporter ATP-binding protein 792854..794407 Ralstonia pickettii 12D 8021875 YP_002984108.1 CDS Rpic12D_4188 NC_012857.1 794410 795612 D PFAM: inner-membrane translocator; KEGG: bmj:BMULJ_04294 simple sugar transporter permease; sugar ABC transporter ATPase 794410..795612 Ralstonia pickettii 12D 8021876 YP_002984109.1 CDS Rpic12D_4189 NC_012857.1 795659 796426 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_C1363 D-xylose dehydrogenase; short-chain dehydrogenase/reductase SDR 795659..796426 Ralstonia pickettii 12D 8021877 YP_002984110.1 CDS Rpic12D_4190 NC_012857.1 796423 797328 D PFAM: SMP-30/gluconolaconase/LRE domain protein; KEGG: bxe:Bxe_C1362 Xylono-1,4-lactonase; SMP-30/gluconolaconase/LRE domain-containing protein 796423..797328 Ralstonia pickettii 12D 8021878 YP_002984111.1 CDS Rpic12D_4191 NC_012857.1 797319 798503 R PFAM: fumarylacetoacetate hydrolase; KEGG: bpy:Bphyt_5802 hypothetical protein; fumarylacetoacetate hydrolase complement(797319..798503) Ralstonia pickettii 12D 8021879 YP_002984112.1 CDS Rpic12D_4192 NC_012857.1 798643 799398 D PFAM: transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: bpt:Bpet4676 IclR family transcriptional regulator; IclR family transcriptional regulator 798643..799398 Ralstonia pickettii 12D 8021880 YP_002984113.1 CDS Rpic12D_4193 NC_012857.1 799488 800504 D PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: bcm:Bcenmc03_6297 LacI family transcription regulator; LacI family transcriptional regulator 799488..800504 Ralstonia pickettii 12D 8021881 YP_002984114.1 CDS Rpic12D_4194 NC_012857.1 800526 802310 R catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate; dihydroxy-acid dehydratase complement(800526..802310) Ralstonia pickettii 12D 8021882 YP_002984115.1 CDS Rpic12D_4195 NC_012857.1 802614 803153 D KEGG: sml:Smlt4328 hypothetical protein; hypothetical protein 802614..803153 Ralstonia pickettii 12D 8021883 YP_002984116.1 CDS Rpic12D_4196 NC_012857.1 803158 803817 R PFAM: isochorismatase hydrolase; KEGG: bpy:Bphyt_3260 isochorismatase hydrolase; isochorismatase hydrolase complement(803158..803817) Ralstonia pickettii 12D 8021884 YP_002984117.1 CDS Rpic12D_4197 NC_012857.1 803952 804947 D PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bpt:Bpet2223 AraC family transcriptional regulator; AraC family transcriptional regulator 803952..804947 Ralstonia pickettii 12D 8021885 YP_002984118.1 CDS Rpic12D_4198 NC_012857.1 804989 805171 R PFAM: 17 kDa surface antigen; KEGG: rso:RS02072 lipoprotein; 17 kDa surface antigen complement(804989..805171) Ralstonia pickettii 12D 8021886 YP_002984119.1 CDS Rpic12D_4199 NC_012857.1 805244 805804 R PFAM: protein of unknown function YGGT; KEGG: rso:RS02073 hypothetical protein; hypothetical protein complement(805244..805804) Ralstonia pickettii 12D 8021887 YP_002984120.1 CDS Rpic12D_4200 NC_012857.1 805982 806545 D PFAM: PEBP family protein; KEGG: spe:Spro_2903 PEBP family protein; PEBP family protein 805982..806545 Ralstonia pickettii 12D 8021888 YP_002984121.1 CDS Rpic12D_4201 NC_012857.1 806595 807581 R KEGG: rso:RSp1383 alkanesulfonates binding protein precursor; TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; SMART: extracellular solute-binding protein family 3; aliphatic sulfonate ABC transporter substrate-binding protein complement(806595..807581) Ralstonia pickettii 12D 8021889 YP_002984122.1 CDS Rpic12D_4202 NC_012857.1 807679 807972 R PFAM: protein of unknown function DUF971; KEGG: pfo:Pfl01_3157 hypothetical protein; hypothetical protein complement(807679..807972) Ralstonia pickettii 12D 8021890 YP_002984123.1 CDS Rpic12D_4203 NC_012857.1 807959 808918 R PFAM: PBS lyase HEAT domain protein repeat-containing protein; HEAT domain containing protein; SMART: PBS lyase HEAT domain protein repeat-containing protein; KEGG: ppw:PputW619_5008 heat repeat-containing PBS lyase; PBS lyase HEAT domain-containing protein complement(807959..808918) Ralstonia pickettii 12D 8021891 YP_002984124.1 CDS Rpic12D_4204 NC_012857.1 808926 809192 R PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bch:Bcen2424_1973 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; 4Fe-4S ferredoxin complement(808926..809192) Ralstonia pickettii 12D 8021892 YP_002984125.1 CDS Rpic12D_4205 NC_012857.1 809195 810919 R PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; KEGG: reh:H16_B2242 oxidoreductase; oxidoreductase complement(809195..810919) Ralstonia pickettii 12D 8021893 YP_002984126.1 CDS Rpic12D_4206 NC_012857.1 810916 811701 R PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: reh:H16_B2241 transcriptional regulator, GntR-family; GntR family transcriptional regulator complement(810916..811701) Ralstonia pickettii 12D 8021894 YP_002984127.1 CDS Rpic12D_4207 NC_012857.1 812097 813083 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: aav:Aave_2255 periplasmic binding protein/LacI transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator 812097..813083 Ralstonia pickettii 12D 8021895 YP_002984128.1 CDS Rpic12D_4208 NC_012857.1 813184 814761 D PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bph:Bphy_5517 ABC transporter; ABC transporter 813184..814761 Ralstonia pickettii 12D 8021896 YP_002984129.1 CDS Rpic12D_4209 NC_012857.1 814758 815807 D PFAM: inner-membrane translocator; KEGG: aav:Aave_2250 inner-membrane translocator; sugar ABC transporter ATPase 814758..815807 Ralstonia pickettii 12D 8021897 YP_002984130.1 CDS Rpic12D_4210 NC_012857.1 815804 816877 D PFAM: inner-membrane translocator; KEGG: aav:Aave_2249 inner membrane ABC transporter permease YjfF; sugar ABC transporter ATPase 815804..816877 Ralstonia pickettii 12D 8021898 YP_002984131.1 CDS Rpic12D_4212 NC_012857.1 817335 817904 R KEGG: rme:Rmet_5010 hypothetical protein; hypothetical protein complement(817335..817904) Ralstonia pickettii 12D 8021900 YP_002984132.1 CDS Rpic12D_4213 NC_012857.1 817942 818367 R KEGG: syg:sync_0841 hypothetical protein; hypothetical protein complement(817942..818367) Ralstonia pickettii 12D 8021901 YP_002984133.1 CDS Rpic12D_4214 NC_012857.1 818390 819052 R PFAM: bifunctional deaminase-reductase domain protein; KEGG: rme:Rmet_4484 bifunctional deaminase-reductase-like protein; bifunctional deaminase-reductase domain-containing protein complement(818390..819052) Ralstonia pickettii 12D 8021902 YP_002984134.1 CDS rdgC NC_012857.1 819228 820151 D Required for efficient pilin antigenic variation; recombination associated protein 819228..820151 Ralstonia pickettii 12D 8021903 YP_002984135.1 CDS Rpic12D_4216 NC_012857.1 820229 820714 R KEGG: rme:Rmet_4176 transcriptional regulator, LysR family; LysR family transcriptional regulator complement(820229..820714) Ralstonia pickettii 12D 8021904 YP_002984136.1 CDS Rpic12D_4218 NC_012857.1 821077 821508 R KEGG: reu:Reut_B4592 hypothetical protein; hypothetical protein complement(821077..821508) Ralstonia pickettii 12D 8021906 YP_002984137.1 CDS Rpic12D_4219 NC_012857.1 821878 822978 D catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 821878..822978 Ralstonia pickettii 12D 8021907 YP_002984138.1 CDS Rpic12D_4220 NC_012857.1 822986 823798 D PFAM: alpha/beta hydrolase fold; KEGG: ppg:PputGB1_3299 alpha/beta hydrolase fold; alpha/beta hydrolase 822986..823798 Ralstonia pickettii 12D 8021908 YP_002984139.1 CDS Rpic12D_4221 NC_012857.1 824101 825264 D PFAM: fatty acid desaturase; KEGG: bch:Bcen2424_0980 alkane 1-monooxygenase; alkane 1-monooxygenase 824101..825264 Ralstonia pickettii 12D 8021909 YP_002984140.1 CDS Rpic12D_4222 NC_012857.1 825274 825537 R PFAM: cupin; KEGG: bpy:Bphyt_7093 hypothetical protein; cupin complement(825274..825537) Ralstonia pickettii 12D 8021910 YP_002984141.1 CDS Rpic12D_4223 NC_012857.1 825766 826665 D PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bcj:BCAM0168 AraC family regulatory protein; AraC family transcriptional regulator 825766..826665 Ralstonia pickettii 12D 8021911 YP_002984142.1 CDS Rpic12D_4224 NC_012857.1 826761 827651 D PFAM: NmrA family protein; KEGG: bcj:BCAM0169 NmrA-like family protein; NmrA family protein 826761..827651 Ralstonia pickettii 12D 8021912 YP_002984143.1 CDS Rpic12D_4225 NC_012857.1 827777 828562 D KEGG: pnu:Pnuc_1326 hypothetical protein; hypothetical protein 827777..828562 Ralstonia pickettii 12D 8021913 YP_002984144.1 CDS Rpic12D_4226 NC_012857.1 828637 829161 D KEGG: rso:RS02076 signal peptide protein; signal peptide protein 828637..829161 Ralstonia pickettii 12D 8021914 YP_002984145.1 CDS Rpic12D_4227 NC_012857.1 829194 829673 R PFAM: PEBP family protein; KEGG: rso:RS01998 hypothetical protein; PEBP family protein complement(829194..829673) Ralstonia pickettii 12D 8021915 YP_002984146.1 CDS Rpic12D_4228 NC_012857.1 829892 830254 R PFAM: protein of unknown function DUF1304; KEGG: rso:RS04765 hypothetical protein; hypothetical protein complement(829892..830254) Ralstonia pickettii 12D 8021916 YP_002984147.1 CDS Rpic12D_4229 NC_012857.1 830440 831156 D PFAM: dienelactone hydrolase; KEGG: rso:RS04764 transmembrane protein; carboxymethylenebutenolidase 830440..831156 Ralstonia pickettii 12D 8021917 YP_002984148.1 CDS Rpic12D_4230 NC_012857.1 831577 831849 D KEGG: rso:RSc3434 hypothetical protein; hypothetical protein 831577..831849 Ralstonia pickettii 12D 8021918 YP_002984149.1 CDS Rpic12D_4231 NC_012857.1 831873 833495 R PFAM: amine oxidase; KEGG: rso:RS04763 hypothetical protein; amine oxidase complement(831873..833495) Ralstonia pickettii 12D 8021919 YP_002984150.1 CDS Rpic12D_4232 NC_012857.1 833495 835072 R catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase complement(833495..835072) Ralstonia pickettii 12D 8021920 YP_002984151.1 CDS Rpic12D_4233 NC_012857.1 835250 835648 D PFAM: protein of unknown function DUF350; KEGG: rso:RS05342 hypothetical protein; hypothetical protein 835250..835648 Ralstonia pickettii 12D 8021921 YP_002984152.1 CDS Rpic12D_4234 NC_012857.1 835698 836747 D KEGG: rso:RS05341 transmembrane protein; transmembrane protein 835698..836747 Ralstonia pickettii 12D 8021922 YP_002984153.1 CDS Rpic12D_4235 NC_012857.1 836835 838280 D KEGG: rso:RS05340 hypothetical protein; hypothetical protein 836835..838280 Ralstonia pickettii 12D 8021923 YP_002984154.1 CDS Rpic12D_4236 NC_012857.1 838277 838465 D KEGG: rso:RS05339 serin-rich transmembrane protein; serin-rich transmembrane protein 838277..838465 Ralstonia pickettii 12D 8021924 YP_002984155.1 CDS Rpic12D_4237 NC_012857.1 838462 838887 D TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; PFAM: S-adenosylmethionine decarboxylase related; KEGG: rso:RS05338 transmembrane protein; S-adenosylmethionine decarboxylase 838462..838887 Ralstonia pickettii 12D 8021925 YP_002984156.1 CDS Rpic12D_4238 NC_012857.1 838889 839935 R KEGG: pen:PSEEN2246 diguanylate cyclase (GGDEF domain); TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; SMART: GGDEF domain containing protein; GAF domain protein; diguanylate cyclase complement(838889..839935) Ralstonia pickettii 12D 8021926 YP_002984157.1 CDS fumC NC_012857.1 840036 841421 R class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase complement(840036..841421) Ralstonia pickettii 12D 8021927 YP_002984158.1 CDS Rpic12D_4240 NC_012857.1 841557 843029 D TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rso:RS05323 transporter transmembrane protein; EmrB/QacA subfamily drug resistance transporter 841557..843029 Ralstonia pickettii 12D 8021928 YP_002984159.1 CDS Rpic12D_4241 NC_012857.1 843055 845205 R PFAM: UvrD/REP helicase; KEGG: rso:RS05321 ATP-dependent DNA helicase II protein; UvrD/REP helicase complement(843055..845205) Ralstonia pickettii 12D 8021929 YP_002984160.1 CDS Rpic12D_4242 NC_012857.1 845306 845623 R KEGG: bam:Bamb_5087 hypothetical protein; hypothetical protein complement(845306..845623) Ralstonia pickettii 12D 8021930 YP_002984161.1 CDS Rpic12D_4243 NC_012857.1 845770 846102 R PFAM: protein of unknown function UPF0060; KEGG: bur:Bcep18194_A4425 hypothetical protein; hypothetical protein complement(845770..846102) Ralstonia pickettii 12D 8021931 YP_002984162.1 CDS Rpic12D_4245 NC_012857.1 846726 847748 R PFAM: GumN family protein; KEGG: aav:Aave_0743 GumN family protein; GumN family protein complement(846726..847748) Ralstonia pickettii 12D 8021933 YP_002984163.1 CDS Rpic12D_4246 NC_012857.1 847832 849013 R KEGG: rso:RS05318 hypothetical protein; hypothetical protein complement(847832..849013) Ralstonia pickettii 12D 8021934 YP_002984164.1 CDS Rpic12D_4247 NC_012857.1 849201 849602 D KEGG: rso:RS05317 hypothetical protein; hypothetical protein 849201..849602 Ralstonia pickettii 12D 8021935 YP_002984165.1 CDS Rpic12D_4248 NC_012857.1 849685 852003 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rso:RS05316 ferrisiderophore receptor protein; TonB-dependent receptor 849685..852003 Ralstonia pickettii 12D 8021936 YP_002984166.1 CDS Rpic12D_4249 NC_012857.1 851991 853256 D KEGG: rso:RS05315 signal peptide protein; signal peptide protein 851991..853256 Ralstonia pickettii 12D 8021937 YP_002984167.1 CDS Rpic12D_4250 NC_012857.1 853253 853759 D KEGG: rso:RS05314 signal peptide protein; signal peptide protein 853253..853759 Ralstonia pickettii 12D 8021938 YP_002984168.1 CDS Rpic12D_4251 NC_012857.1 853993 854271 R hypothetical protein complement(853993..854271) Ralstonia pickettii 12D 8021939 YP_002984169.1 CDS Rpic12D_4252 NC_012857.1 854289 855047 R PFAM: protein of unknown function DUF81; KEGG: rso:RS05313 integral membrane transmembrane protein; hypothetical protein complement(854289..855047) Ralstonia pickettii 12D 8021940 YP_002984170.1 CDS Rpic12D_4253 NC_012857.1 855178 856062 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RS05312 transcription regulator protein; LysR family transcriptional regulator 855178..856062 Ralstonia pickettii 12D 8021941 YP_002984171.1 CDS Rpic12D_4254 NC_012857.1 856207 856728 D KEGG: rso:RS05311 hypothetical protein; hypothetical protein 856207..856728 Ralstonia pickettii 12D 8021942 YP_002984172.1 CDS Rpic12D_4255 NC_012857.1 856878 858575 D PFAM: AMP-dependent synthetase and ligase; KEGG: rso:RS05310 acetyl-coenzyme A synthetase; AMP-dependent synthetase and ligase 856878..858575 Ralstonia pickettii 12D 8021943 YP_002984173.1 CDS Rpic12D_4256 NC_012857.1 858652 858993 R PFAM: protein of unknown function DUF1488; KEGG: rso:RS05307 hypothetical protein; hypothetical protein complement(858652..858993) Ralstonia pickettii 12D 8021944 YP_002984174.1 CDS Rpic12D_4257 NC_012857.1 859264 859464 R hypothetical protein complement(859264..859464) Ralstonia pickettii 12D 8021945 YP_002984175.1 CDS Rpic12D_4258 NC_012857.1 859883 860941 D KEGG: rso:RS05306 signal peptide protein; signal peptide protein 859883..860941 Ralstonia pickettii 12D 8021946 YP_002984176.1 CDS Rpic12D_4261 NC_012857.1 862593 862724 R KEGG: rso:RS05305 lipoprotein transmembrane; lipoprotein transmembrane complement(862593..862724) Ralstonia pickettii 12D 8021949 YP_002984177.1 CDS Rpic12D_4262 NC_012857.1 862789 862914 R hypothetical protein complement(862789..862914) Ralstonia pickettii 12D 8021950 YP_002984178.1 CDS Rpic12D_4263 NC_012857.1 863150 863296 D KEGG: rso:RS05304 hypothetical protein; hypothetical protein 863150..863296 Ralstonia pickettii 12D 8021951 YP_002984179.1 CDS Rpic12D_4264 NC_012857.1 863440 864066 R PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: rso:RSp1258 [acyl-carrier-protein] phosphodiesterase; NAD(P)H dehydrogenase (quinone) complement(863440..864066) Ralstonia pickettii 12D 8021952 YP_002984180.1 CDS Rpic12D_4265 NC_012857.1 864194 865141 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RS05302 transcription regulator protein; LysR family transcriptional regulator 864194..865141 Ralstonia pickettii 12D 8021953 YP_002984181.1 CDS Rpic12D_4266 NC_012857.1 865232 866812 D TIGRFAM: drug resistance transporter EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rso:RS05301 integral membrane transmembrane protein; EmrB/QacA subfamily drug resistance transporter 865232..866812 Ralstonia pickettii 12D 8021954 YP_002984182.1 CDS Rpic12D_4267 NC_012857.1 866824 867720 R KEGG: rso:RS05300 hypothetical protein; hypothetical protein complement(866824..867720) Ralstonia pickettii 12D 8021955 YP_002984183.1 CDS Rpic12D_4268 NC_012857.1 867905 868834 D KEGG: rso:RS03196 signal peptide protein; signal peptide protein 867905..868834 Ralstonia pickettii 12D 8021956 YP_002984184.1 CDS Rpic12D_4269 NC_012857.1 868839 869270 R KEGG: rso:RS03194 hypothetical protein; hypothetical protein complement(868839..869270) Ralstonia pickettii 12D 8021957 YP_002984185.1 CDS Rpic12D_4270 NC_012857.1 869531 870562 R PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: rso:RS03187 transmembrane cytochrome bd-II oxidase (subunit II) oxidoreductase protein; cytochrome bd ubiquinol oxidase subunit II complement(869531..870562) Ralstonia pickettii 12D 8021958 YP_002984186.1 CDS Rpic12D_4271 NC_012857.1 870559 871932 R PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: rso:RS03186 transmembrane cytochrome bd-II oxidase (subunit I) oxidoreductase protein; cytochrome bd ubiquinol oxidase subunit I complement(870559..871932) Ralstonia pickettii 12D 8021959 YP_002984187.1 CDS Rpic12D_4272 NC_012857.1 871948 872508 R KEGG: rso:RS03185 hypothetical protein; hypothetical protein complement(871948..872508) Ralstonia pickettii 12D 8021960 YP_002984188.1 CDS Rpic12D_4273 NC_012857.1 872717 872971 D PFAM: transglycosylase; KEGG: bpy:Bphyt_4801 transglycosylase; transglycosylase 872717..872971 Ralstonia pickettii 12D 8021961 YP_002984189.1 CDS Rpic12D_4274 NC_012857.1 873133 873426 D KEGG: rso:RSc2198 hypothetical protein; hypothetical protein 873133..873426 Ralstonia pickettii 12D 8021962 YP_002984190.1 CDS Rpic12D_4275 NC_012857.1 873811 875133 D PFAM: major facilitator superfamily MFS_1; KEGG: rso:RS03167 high affinity nitrate transporter transmembrane protein; major facilitator superfamily protein 873811..875133 Ralstonia pickettii 12D 8021963 YP_002984191.1 CDS Rpic12D_4276 NC_012857.1 875148 877703 D TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: rso:RSp1222 nitrite reductase NADPH large subunit; nitrite reductase (NAD(P)H) large subunit 875148..877703 Ralstonia pickettii 12D 8021964 YP_002984192.1 CDS Rpic12D_4277 NC_012857.1 877730 878068 D TIGRFAM: nitrite reductase [NAD(P)H], small subunit; KEGG: rso:RSp1221 nitrite reductase NADPH small subunit; nitrite reductase (NAD(P)H) small subunit 877730..878068 Ralstonia pickettii 12D 8021965 YP_002984193.1 CDS Rpic12D_4278 NC_012857.1 878108 879340 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rso:RS03164 flavoprotein FAD oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 878108..879340 Ralstonia pickettii 12D 8021966 YP_002984194.1 CDS Rpic12D_4279 NC_012857.1 879640 882387 D PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; molydopterin dinucleotide-binding region; KEGG: rso:RSp1219 nitrate reductase large subunit oxidoreductase protein; nitrate reductase 879640..882387 Ralstonia pickettii 12D 8021967 YP_002984195.1 CDS Rpic12D_4280 NC_012857.1 882498 883112 D KEGG: rso:RS03158 hypothetical protein; hypothetical protein 882498..883112 Ralstonia pickettii 12D 8021968 YP_002984196.1 CDS Rpic12D_4281 NC_012857.1 883109 884476 D TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: rso:RS03157 hypothetical protein; MATE efflux family protein 883109..884476 Ralstonia pickettii 12D 8021969 YP_002984197.1 CDS Rpic12D_4282 NC_012857.1 884533 885795 R PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr5045 inner membrane protein; major facilitator superfamily protein complement(884533..885795) Ralstonia pickettii 12D 8021970 YP_002984198.1 CDS cls NC_012857.1 885888 887321 R catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol); cardiolipin synthetase complement(885888..887321) Ralstonia pickettii 12D 8021971 YP_002984199.1 CDS Rpic12D_4284 NC_012857.1 887507 889201 D PFAM: phospholipase D/transphosphatidylase; SMART: phospholipase D/transphosphatidylase; KEGG: pol:Bpro_4230 phospholipase D/transphosphatidylase; phospholipase D/transphosphatidylase 887507..889201 Ralstonia pickettii 12D 8021972 YP_002984200.1 CDS Rpic12D_4285 NC_012857.1 889278 889418 R PFAM: entericidin EcnAB; KEGG: rso:RS03154 lipoprotein transmembrane; entericidin EcnAB complement(889278..889418) Ralstonia pickettii 12D 8021973 YP_002984201.1 CDS Rpic12D_4286 NC_012857.1 889710 891278 D PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: rso:RS03153 methyl-accepting chemotaxis transducer transmembrane protein; methyl-accepting chemotaxis sensory transducer 889710..891278 Ralstonia pickettii 12D 8021974 YP_002984202.1 CDS Rpic12D_4287 NC_012857.1 891335 892750 R KEGG: rso:RS03152 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase complement(891335..892750) Ralstonia pickettii 12D 8021975 YP_002984203.1 CDS Rpic12D_4288 NC_012857.1 892975 893880 R PFAM: type IV pilus assembly PilZ; KEGG: rso:RS03149 hypothetical protein; type IV pilus assembly PilZ complement(892975..893880) Ralstonia pickettii 12D 8021976 YP_002984204.1 CDS Rpic12D_4289 NC_012857.1 894000 894512 D PFAM: GtrA family protein; KEGG: rme:Rmet_5967 GtrA-like protein; GtrA family protein 894000..894512 Ralstonia pickettii 12D 8021977 YP_002984205.1 CDS Rpic12D_4290 NC_012857.1 894529 895011 R KEGG: rso:RS03148 hypothetical protein; hypothetical protein complement(894529..895011) Ralstonia pickettii 12D 8021978 YP_002984206.1 CDS Rpic12D_4291 NC_012857.1 895664 897004 D KEGG: rso:RS03147 hypothetical protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; hypothetical protein; PAS fold domain protein; SMART: GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein; diguanylate cyclase 895664..897004 Ralstonia pickettii 12D 8021979 YP_002984207.1 CDS Rpic12D_4292 NC_012857.1 897083 897646 R KEGG: rso:RS03145 signal peptide protein; signal peptide protein complement(897083..897646) Ralstonia pickettii 12D 8021980 YP_002984208.1 CDS Rpic12D_4293 NC_012857.1 897947 899452 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rso:RS03144 outer membrane channel lipoprotein transmembrane; NodT family RND efflux system outer membrane lipoprotein complement(897947..899452) Ralstonia pickettii 12D 8021981 YP_002984209.1 CDS Rpic12D_4294 NC_012857.1 899455 902556 R PFAM: acriflavin resistance protein; KEGG: rso:RS03143 drug efflux transmembrane protein; acriflavin resistance protein complement(899455..902556) Ralstonia pickettii 12D 8021982 YP_002984210.1 CDS Rpic12D_4295 NC_012857.1 902553 905687 R PFAM: acriflavin resistance protein; KEGG: rso:RS03142 drug efflux pump transmembrane protein; acriflavin resistance protein complement(902553..905687) Ralstonia pickettii 12D 8021983 YP_002984211.1 CDS Rpic12D_4296 NC_012857.1 905745 907133 R TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: rso:RS03141 resistance transmembrane protein; RND family efflux transporter MFP subunit complement(905745..907133) Ralstonia pickettii 12D 8021984 YP_002984212.1 CDS Rpic12D_4297 NC_012857.1 907387 908118 D PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: rso:RS03140 two component response regulator transcription regulator protein; transcriptional regulator 907387..908118 Ralstonia pickettii 12D 8021985 YP_002984213.1 CDS Rpic12D_4298 NC_012857.1 908102 909388 D PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: rso:RS03139 two component transmembrane sensor kinase transcription regulator protein; histidine kinase 908102..909388 Ralstonia pickettii 12D 8021986 YP_002984214.1 CDS Rpic12D_4299 NC_012857.1 909495 909932 D PFAM: protein of unknown function DUF333; KEGG: rso:RS03138 proline rich transmembrane protein; hypothetical protein 909495..909932 Ralstonia pickettii 12D 8021987 YP_002984215.1 CDS Rpic12D_4300 NC_012857.1 910018 911673 R PFAM: glycosyl transferase family 39; KEGG: rso:RS03137 hypothetical protein; glycosyl transferase family protein complement(910018..911673) Ralstonia pickettii 12D 8021988 YP_002984216.1 CDS ribB NC_012857.1 912358 913083 D DHBP synthase; functions during riboflavin biosynthesis; 3,4-dihydroxy-2-butanone 4-phosphate synthase 912358..913083 Ralstonia pickettii 12D 8021989 YP_002984217.1 CDS Rpic12D_4302 NC_012857.1 913118 913744 R catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase complement(913118..913744) Ralstonia pickettii 12D 8021990 YP_002984218.1 CDS Rpic12D_4303 NC_012857.1 913779 915131 R TIGRFAM: gluconate transporter; PFAM: gluconate transporter; citrate transporter; KEGG: rso:RSp1189 high-affinity gluconate transporter (GNT-III system) transmembrane protein; gluconate transporter complement(913779..915131) Ralstonia pickettii 12D 8021991 YP_002984219.1 CDS Rpic12D_4304 NC_012857.1 915212 915598 R PFAM: endoribonuclease L-PSP; KEGG: rso:RS03132 hypothetical protein; endoribonuclease L-PSP complement(915212..915598) Ralstonia pickettii 12D 8021992 YP_002984220.1 CDS Rpic12D_4305 NC_012857.1 915640 917124 R PFAM: amidohydrolase; D-aminoacylase domain protein; amidohydrolase; KEGG: rso:RSp1187 N-acyl-D-glutamate deacylase protein; N-acyl-D-amino-acid deacylase complement(915640..917124) Ralstonia pickettii 12D 8021993 YP_002984221.1 CDS Rpic12D_4306 NC_012857.1 917126 918019 R PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: rso:RS03130 hypothetical protein; RpiR family transcriptional regulator complement(917126..918019) Ralstonia pickettii 12D 8021994 YP_002984222.1 CDS Rpic12D_4307 NC_012857.1 918158 919435 D PFAM: alanine racemase domain protein; KEGG: rso:RSp1185 D-serine deaminase; alanine racemase domain-containing protein 918158..919435 Ralstonia pickettii 12D 8021995 YP_002984223.1 CDS Rpic12D_4308 NC_012857.1 919448 920374 D PFAM: PfkB domain protein; KEGG: rso:RS05074 fructokinase-like protein (sugar kinase); PfkB domain-containing protein 919448..920374 Ralstonia pickettii 12D 8021996 YP_002984224.1 CDS Rpic12D_4309 NC_012857.1 920702 923131 R PFAM: peptidase S45 penicillin amidase; KEGG: vei:Veis_3277 penicillin amidase; peptidase S45 penicillin amidase complement(920702..923131) Ralstonia pickettii 12D 8021997 YP_002984225.1 CDS Rpic12D_4310 NC_012857.1 923399 925294 R KEGG: rso:RS05068 composite two-component sensor histidine kinase and response regulator hybrid transcription regulator protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; hypothetical protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; PAS/PAC sensor hybrid histidine kinase complement(923399..925294) Ralstonia pickettii 12D 8021998 YP_002984226.1 CDS Rpic12D_4311 NC_012857.1 925587 926885 R PFAM: major facilitator superfamily MFS_1; protein of unknown function DUF894 DitE; KEGG: rso:RS05067 hypothetical protein; major facilitator superfamily protein complement(925587..926885) Ralstonia pickettii 12D 8021999 YP_002984227.1 CDS Rpic12D_4312 NC_012857.1 927038 927394 D KEGG: reu:Reut_B4511 hypothetical protein; hypothetical protein 927038..927394 Ralstonia pickettii 12D 8022000 YP_002984228.1 CDS Rpic12D_4313 NC_012857.1 927413 927691 R KEGG: rso:RS05066 hypothetical protein; hypothetical protein complement(927413..927691) Ralstonia pickettii 12D 8022001 YP_002984229.1 CDS Rpic12D_4314 NC_012857.1 928045 928293 D PFAM: protein of unknown function DUF1458; KEGG: rso:RS05065 hypothetical protein; hypothetical protein 928045..928293 Ralstonia pickettii 12D 8022002 YP_002984230.1 CDS Rpic12D_4315 NC_012857.1 928359 930521 R TIGRFAM: acid phosphatase; PFAM: phosphoesterase; KEGG: rso:RSp1174 acid phosphatase protein; acid phosphatase complement(928359..930521) Ralstonia pickettii 12D 8022003 YP_002984231.1 CDS Rpic12D_4316 NC_012857.1 930796 932187 D PFAM: Di-haem cytochrome C peroxidase; KEGG: rso:RS05063 lipoprotein transmembrane; di-heme cytochrome C peroxidase 930796..932187 Ralstonia pickettii 12D 8022004 YP_002984232.1 CDS Rpic12D_4317 NC_012857.1 932311 933891 D PFAM: integral membrane protein TerC; transporter-associated region; CBS domain containing protein; KEGG: rso:RS05062 hypothetical protein; integral membrane protein TerC 932311..933891 Ralstonia pickettii 12D 8022005 YP_002984233.1 CDS Rpic12D_4318 NC_012857.1 933888 934805 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: rme:Rmet_0006 protein of unknown function DUF6, transmembrane; hypothetical protein complement(933888..934805) Ralstonia pickettii 12D 8022006 YP_002984234.1 CDS Rpic12D_4319 NC_012857.1 934898 935677 R PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rle:RL3396 AraC family transcriptional regulator; AraC family transcriptional regulator complement(934898..935677) Ralstonia pickettii 12D 8022007 YP_002984235.1 CDS Rpic12D_4320 NC_012857.1 935938 937494 D KEGG: rso:RS05645 two-component sensor histidine kinase transcription regulator protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; histidine kinase 935938..937494 Ralstonia pickettii 12D 8022008 YP_002984236.1 CDS Rpic12D_4321 NC_012857.1 937478 938137 D PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: rso:RS05646 two-component response regulator transcription regulator protein; transcriptional regulator 937478..938137 Ralstonia pickettii 12D 8022009 YP_002984237.1 CDS Rpic12D_4322 NC_012857.1 938243 938815 D KEGG: rso:RS05425 lipoprotein signal peptide; lipoprotein signal peptide 938243..938815 Ralstonia pickettii 12D 8022010 YP_002984238.1 CDS Rpic12D_4323 NC_012857.1 938877 939317 R PFAM: UspA domain protein; KEGG: rso:RS05426 hypothetical protein; UspA domain-containing protein complement(938877..939317) Ralstonia pickettii 12D 8022011 YP_002984239.1 CDS Rpic12D_4324 NC_012857.1 939472 940389 R PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rso:RS05428 transcription regulator protein; AraC family transcriptional regulator complement(939472..940389) Ralstonia pickettii 12D 8022012 YP_002984240.1 CDS Rpic12D_4325 NC_012857.1 940442 940873 R KEGG: rso:RS05430 signal peptide protein; signal peptide protein complement(940442..940873) Ralstonia pickettii 12D 8022013 YP_002984241.1 CDS Rpic12D_4326 NC_012857.1 940870 941232 R KEGG: GK10809; hypothetical protein complement(940870..941232) Ralstonia pickettii 12D 8022014 YP_002984242.1 CDS Rpic12D_4327 NC_012857.1 941946 944696 D KEGG: rso:RS05432 hypothetical protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; GAF domain protein; hypothetical protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase 941946..944696 Ralstonia pickettii 12D 8022015 YP_002984243.1 CDS Rpic12D_4328 NC_012857.1 944820 945323 D KEGG: rso:RS05433 hypothetical protein; hypothetical protein 944820..945323 Ralstonia pickettii 12D 8022016 YP_002984244.1 CDS Rpic12D_4329 NC_012857.1 945382 946194 D TIGRFAM: molybdate transport repressor, ModE; PFAM: TOBE domain protein; regulatory protein LysR; KEGG: rso:RS05434 molybdenum-pterin-binding protein; ModE family transcriptional regulator 945382..946194 Ralstonia pickettii 12D 8022017 YP_002984245.1 CDS Rpic12D_4330 NC_012857.1 946202 946699 D PFAM: flavodoxin/nitric oxide synthase; KEGG: ajs:Ajs_1688 NAD(P)H dehydrogenase (quinone); flavodoxin/nitric oxide synthase 946202..946699 Ralstonia pickettii 12D 8022018 YP_002984246.1 CDS Rpic12D_4331 NC_012857.1 946702 947445 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: rso:RS05462 ABC transporter ATP-binding protein; ABC transporter complement(946702..947445) Ralstonia pickettii 12D 8022019 YP_002984247.1 CDS Rpic12D_4332 NC_012857.1 947442 948128 R TIGRFAM: molybdate ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: rso:RS05467 hypothetical protein; molybdate ABC transporter inner membrane subunit complement(947442..948128) Ralstonia pickettii 12D 8022020 YP_002984248.1 CDS Rpic12D_4333 NC_012857.1 948385 949917 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: rso:RS05506 outer-membrane drug efflux protein; NodT family RND efflux system outer membrane lipoprotein complement(948385..949917) Ralstonia pickettii 12D 8022021 YP_002984249.1 CDS Rpic12D_4334 NC_012857.1 949979 953185 R TIGRFAM: transporter hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: rso:RSp1113 transmembrane multidrug-efflux system lipoprotein transmembrane; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(949979..953185) Ralstonia pickettii 12D 8022022 YP_002984250.1 CDS Rpic12D_4335 NC_012857.1 953215 954525 R TIGRFAM: efflux transporter RND family, MFP subunit; PFAM: secretion protein HlyD; KEGG: rso:RSp1112 transmembrane multidrug efflux system transmembrane protein; RND family efflux transporter MFP subunit complement(953215..954525) Ralstonia pickettii 12D 8022023 YP_002984251.1 CDS Rpic12D_4336 NC_012857.1 954641 955732 R PFAM: alpha/beta hydrolase; KEGG: rso:RS02619 lipase protein; alpha/beta hydrolase complement(954641..955732) Ralstonia pickettii 12D 8022024 YP_002984252.1 CDS Rpic12D_4337 NC_012857.1 956073 957017 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RS02618 transcription regulator protein; LysR family transcriptional regulator 956073..957017 Ralstonia pickettii 12D 8022025 YP_002984253.1 CDS Rpic12D_4338 NC_012857.1 957115 957372 D KEGG: rso:RSc0320 hypothetical protein; hypothetical protein 957115..957372 Ralstonia pickettii 12D 8022026 YP_002984254.1 CDS Rpic12D_4339 NC_012857.1 957521 958297 D PFAM: protein of unknown function DUF82; KEGG: rso:RS02617 hypothetical protein; hypothetical protein 957521..958297 Ralstonia pickettii 12D 8022027 YP_002984255.1 CDS Rpic12D_4340 NC_012857.1 958298 959728 R KEGG: rso:RSp1105 alpha,alpha-trehalose-phosphate synthase; TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; PFAM: glycosyl transferase family 20; alpha,alpha-trehalose-phosphate synthase complement(958298..959728) Ralstonia pickettii 12D 8022028 YP_002984256.1 CDS Rpic12D_4341 NC_012857.1 959725 960525 R KEGG: rso:RSp1104 trehalose-phosphatase protein; TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase; trehalose-phosphatase complement(959725..960525) Ralstonia pickettii 12D 8022029 YP_002984257.1 CDS Rpic12D_4342 NC_012857.1 960687 962738 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bte:BTH_II0478 2,4-dienoyl-CoA reductase; NADH:flavin oxidoreductase complement(960687..962738) Ralstonia pickettii 12D 8022030 YP_002984258.1 CDS Rpic12D_4343 NC_012857.1 962846 963094 R KEGG: rso:RS02609 hypothetical protein; hypothetical protein complement(962846..963094) Ralstonia pickettii 12D 8022031 YP_002984259.1 CDS Rpic12D_4344 NC_012857.1 963139 964119 D KEGG: rso:RS02608 integrase/recombinase protein; integrase/recombinase protein 963139..964119 Ralstonia pickettii 12D 8022032 YP_002984260.1 CDS Rpic12D_4345 NC_012857.1 964287 965312 D TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: rso:RSp1101 UDP-glucose 4-epimerase protein; UDP-glucose 4-epimerase 964287..965312 Ralstonia pickettii 12D 8022033 YP_002984261.1 CDS Rpic12D_4346 NC_012857.1 965351 966778 D TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; KEGG: rso:RS02606 lipoprotein transmembrane; PAS/PAC sensor protein 965351..966778 Ralstonia pickettii 12D 8022034 YP_002984262.1 CDS Rpic12D_4347 NC_012857.1 966959 968500 D PFAM: chemotaxis sensory transducer; Cache type 2 domain protein; SMART: chemotaxis sensory transducer; KEGG: rso:RS02605 methyl-accepting chemotaxis transducer transmembrane protein; methyl-accepting chemotaxis sensory transducer with Cache sensor 966959..968500 Ralstonia pickettii 12D 8022035 YP_002984263.1 CDS Rpic12D_4348 NC_012857.1 968621 968929 R PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS; KEGG: rso:RS02604 HNS-like transcription regulator protein; histone family protein nucleoid-structuring protein H-NS complement(968621..968929) Ralstonia pickettii 12D 8022036 YP_002984264.1 CDS Rpic12D_4349 NC_012857.1 969343 971430 R KEGG: rso:RS02603 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase complement(969343..971430) Ralstonia pickettii 12D 8022037 YP_002984265.1 CDS Rpic12D_4350 NC_012857.1 971735 972988 R PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: rso:RS02602 transcription regulator protein; LuxR family transcriptional regulator complement(971735..972988) Ralstonia pickettii 12D 8022038 YP_002984266.1 CDS Rpic12D_4351 NC_012857.1 973120 974865 R PFAM: polypeptide-transport-associated domain protein ShlB-type; KEGG: rso:RS02601 activation/secretion signal peptide protein; polypeptide-transport-associated domain-containing protein complement(973120..974865) Ralstonia pickettii 12D 8022039 YP_002984267.1 CDS Rpic12D_4352 NC_012857.1 975072 976547 R KEGG: rso:RS02600 hemagglutinin-related transmembrane protein; hemagglutinin-related transmembrane protein complement(975072..976547) Ralstonia pickettii 12D 8022040 YP_002984268.1 CDS Rpic12D_4353 NC_012857.1 977096 978160 D KEGG: rso:RS02599 hemagglutinin-related transmembrane protein; hemagglutinin-related transmembrane protein 977096..978160 Ralstonia pickettii 12D 8022041 YP_002984269.1 CDS Rpic12D_4354 NC_012857.1 978726 978905 D PFAM: Flp/Fap pilin component; KEGG: rso:RS02598 pilin protein; Flp/Fap pilin component 978726..978905 Ralstonia pickettii 12D 8022042 YP_002984270.1 CDS Rpic12D_4355 NC_012857.1 978915 979466 D PFAM: peptidase A24A prepilin type IV; KEGG: rso:RSp1091 prepilin peptidase transmembrane protein; peptidase A24A prepilin type IV 978915..979466 Ralstonia pickettii 12D 8022043 YP_002984271.1 CDS Rpic12D_4356 NC_012857.1 979531 980034 D PFAM: TadE family protein; KEGG: rso:RS02595 hypothetical protein; TadE family protein 979531..980034 Ralstonia pickettii 12D 8022044 YP_002984272.1 CDS Rpic12D_4357 NC_012857.1 980087 981010 D TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: rso:RS02596 signal peptide protein; Flp pilus assembly protein CpaB 980087..981010 Ralstonia pickettii 12D 8022045 YP_002984273.1 CDS Rpic12D_4358 NC_012857.1 981003 982367 D PFAM: type II and III secretion system protein; KEGG: rso:RS02594 outer membrane channel signal peptide protein; type II and III secretion system protein 981003..982367 Ralstonia pickettii 12D 8022046 YP_002984274.1 CDS Rpic12D_4359 NC_012857.1 982377 983720 D KEGG: rso:RSp1086 pilus assembly protein; pilus assembly protein 982377..983720 Ralstonia pickettii 12D 8022047 YP_002984275.1 CDS Rpic12D_4360 NC_012857.1 983717 985072 D PFAM: type II secretion system protein E; KEGG: rso:RSp1085 secretion ATPase protein; type II secretion system protein E 983717..985072 Ralstonia pickettii 12D 8022048 YP_002984276.1 CDS Rpic12D_4361 NC_012857.1 985065 985991 D PFAM: type II secretion system protein; KEGG: rso:RS02591 pilus assembly transmembrane protein; type II secretion system protein 985065..985991 Ralstonia pickettii 12D 8022049 YP_002984277.1 CDS Rpic12D_4362 NC_012857.1 986001 986990 D PFAM: type II secretion system protein; KEGG: rso:RS02590 tight adherence TadC related transmembrane protein; type II secretion system protein 986001..986990 Ralstonia pickettii 12D 8022050 YP_002984278.1 CDS Rpic12D_4363 NC_012857.1 986992 987915 D PFAM: hypothetical protein; KEGG: rso:RS02589 lipoprotein transmembrane; hypothetical protein 986992..987915 Ralstonia pickettii 12D 8022051 YP_002984279.1 CDS Rpic12D_4364 NC_012857.1 987912 988241 D KEGG: rso:RS02588 signal peptide protein; signal peptide protein 987912..988241 Ralstonia pickettii 12D 8022052 YP_002984280.1 CDS Rpic12D_4365 NC_012857.1 988333 989991 D KEGG: rso:RS02587 hypothetical protein; hypothetical protein 988333..989991 Ralstonia pickettii 12D 8022053 YP_002984281.1 CDS Rpic12D_4366 NC_012857.1 990007 991422 D PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: rso:RS02586 sigma-54 interacting transcription regulator protein; Fis family transcriptional regulator 990007..991422 Ralstonia pickettii 12D 8022054 YP_002984282.1 CDS Rpic12D_4367 NC_012857.1 991529 992311 D KEGG: rso:RS02585 lipoprotein; lipoprotein 991529..992311 Ralstonia pickettii 12D 8022055 YP_002984283.1 CDS Rpic12D_4368 NC_012857.1 992462 995701 D PFAM: cytochrome P450; FAD-binding domain protein; flavodoxin/nitric oxide synthase; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: rme:Rmet_3467 cytochrome P450; cytochrome P450 992462..995701 Ralstonia pickettii 12D 8022056 YP_002984284.1 CDS Rpic12D_4369 NC_012857.1 995870 996160 D KEGG: rso:RS02582 hypothetical protein; hypothetical protein 995870..996160 Ralstonia pickettii 12D 8022057 YP_002984285.1 CDS Rpic12D_4370 NC_012857.1 996213 997367 R PFAM: oxidoreductase domain protein; semialdehyde dehydrogenase NAD - binding; oxidoreductase domain; KEGG: rso:RS02580 glucose-fructose oxidoreductase oxidoreductase protein; oxidoreductase domain-containing protein complement(996213..997367) Ralstonia pickettii 12D 8022058 YP_002984286.1 CDS Rpic12D_4371 NC_012857.1 997520 997864 R PFAM: antibiotic biosynthesis monooxygenase; KEGG: reu:Reut_B5114 antibiotic biosynthesis monooxygenase; antibiotic biosynthesis monooxygenase complement(997520..997864) Ralstonia pickettii 12D 8022059 YP_002984287.1 CDS Rpic12D_4372 NC_012857.1 997913 999052 R KEGG: reu:Reut_B5115 cytochrome p450 oxidoreductase; cytochrome p450 oxidoreductase complement(997913..999052) Ralstonia pickettii 12D 8022060 YP_002984288.1 CDS Rpic12D_4373 NC_012857.1 999141 999857 D PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: ote:Oter_1308 ArsR family transcriptional regulator; ArsR family transcriptional regulator 999141..999857 Ralstonia pickettii 12D 8022061 YP_002984289.1 CDS Rpic12D_4374 NC_012857.1 999874 1000416 R PFAM: GCN5-related N-acetyltransferase; KEGG: bmj:BMULJ_00080 diamine N-acetyltransferase; N-acetyltransferase GCN5 complement(999874..1000416) Ralstonia pickettii 12D 8022062 YP_002984290.1 CDS Rpic12D_4375 NC_012857.1 1000472 1001614 R PFAM: PepSY-associated TM helix domain protein; KEGG: pap:PSPA7_5127 oxidoreductase; PepSY-associated TM helix domain-containing protein complement(1000472..1001614) Ralstonia pickettii 12D 8022063 YP_002984291.1 CDS Rpic12D_4376 NC_012857.1 1001645 1003765 R TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rso:RS02469 ferrisiderophore receptor protein; TonB-dependent siderophore receptor complement(1001645..1003765) Ralstonia pickettii 12D 8022064 YP_002984292.1 CDS Rpic12D_4377 NC_012857.1 1004031 1005107 D PFAM: oxidoreductase domain protein; semialdehyde dehydrogenase NAD - binding; oxidoreductase domain; KEGG: rso:RS02398 oxidoreductase protein; oxidoreductase domain-containing protein 1004031..1005107 Ralstonia pickettii 12D 8022065 YP_002984293.1 CDS Rpic12D_4378 NC_012857.1 1005104 1007215 D PFAM: sodium/hydrogen exchanger; KEGG: reu:Reut_B3954 sodium/hydrogen exchanger; sodium/hydrogen exchanger 1005104..1007215 Ralstonia pickettii 12D 8022066 YP_002984294.1 CDS Rpic12D_4379 NC_012857.1 1007243 1008505 R PFAM: patatin; KEGG: rso:RS02397 transmembrane protein; patatin complement(1007243..1008505) Ralstonia pickettii 12D 8022067 YP_002984295.1 CDS Rpic12D_4380 NC_012857.1 1008537 1009322 R catalyzes the formation of acetoacetate from 3-hydroxybutyrate; 3-hydroxybutyrate dehydrogenase complement(1008537..1009322) Ralstonia pickettii 12D 8022068 YP_002984296.1 CDS Rpic12D_4381 NC_012857.1 1009376 1010119 R converts acetoacetate to acetone and carbon dioxide; acetoacetate decarboxylase complement(1009376..1010119) Ralstonia pickettii 12D 8022069 YP_002984297.1 CDS Rpic12D_4382 NC_012857.1 1010312 1011715 R PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: rso:RS02394 transcription regulator protein; GntR family transcriptional regulator complement(1010312..1011715) Ralstonia pickettii 12D 8022070 YP_002984298.1 CDS Rpic12D_4383 NC_012857.1 1011871 1013208 D catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; beta alanine--pyruvate transaminase 1011871..1013208 Ralstonia pickettii 12D 8022071 YP_002984299.1 CDS Rpic12D_4384 NC_012857.1 1013210 1014733 D TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: rso:RS02392 transmembrane aldehyde dehydrogenase oxidoreductase protein; methylmalonate-semialdehyde dehydrogenase 1013210..1014733 Ralstonia pickettii 12D 8022072 YP_002984300.1 CDS Rpic12D_4385 NC_012857.1 1014810 1015016 R KEGG: rso:RS02391 hypothetical protein; cold-shock DNA-binding domain-containing protein complement(1014810..1015016) Ralstonia pickettii 12D 8022073 YP_002984301.1 CDS Rpic12D_4386 NC_012857.1 1015194 1015397 R PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: tbd:Tbd_0855 cold-shock DNA-binding protein family protein; cold-shock DNA-binding domain-containing protein complement(1015194..1015397) Ralstonia pickettii 12D 8022074 YP_002984302.1 CDS Rpic12D_4387 NC_012857.1 1015749 1017644 D PFAM: potassium transporter; KEGG: rso:RSp1052 potassium uptake transmembrane protein; potassium transporter 1015749..1017644 Ralstonia pickettii 12D 8022075 YP_002984303.1 CDS Rpic12D_4388 NC_012857.1 1017663 1018478 R TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: rso:RSp1050 formate dehydrogenase associated protein; formate dehydrogenase family accessory protein FdhD complement(1017663..1018478) Ralstonia pickettii 12D 8022076 YP_002984304.1 CDS Rpic12D_4389 NC_012857.1 1018475 1018720 R KEGG: rso:RS02386 hypothetical protein; hypothetical protein complement(1018475..1018720) Ralstonia pickettii 12D 8022077 YP_002984305.1 CDS Rpic12D_4390 NC_012857.1 1018720 1021059 R TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: rso:RS02045 formate dehydrogenase oxidoreductase protein; oxidoreductase alpha (molybdopterin) subunit complement(1018720..1021059) Ralstonia pickettii 12D 8022078 YP_002984306.1 CDS Rpic12D_4391 NC_012857.1 1021088 1022815 R PFAM: major facilitator superfamily MFS_1; KEGG: rso:RS02384 transporter transmembrane protein; major facilitator superfamily protein complement(1021088..1022815) Ralstonia pickettii 12D 8022079 YP_002984307.1 CDS Rpic12D_4392 NC_012857.1 1023024 1023503 R PFAM: Hpt domain protein; KEGG: rso:RS02382 hypothetical protein; Hpt protein complement(1023024..1023503) Ralstonia pickettii 12D 8022080 YP_002984308.1 CDS Rpic12D_4393 NC_012857.1 1023596 1026691 R TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: pnu:Pnuc_1300 CzcA family heavy metal efflux protein; CzcA family heavy metal efflux pump complement(1023596..1026691) Ralstonia pickettii 12D 8022081 YP_002984309.1 CDS Rpic12D_4394 NC_012857.1 1026694 1027842 R TIGRFAM: efflux transporter RND family, MFP subunit; KEGG: pnu:Pnuc_1301 RND family efflux transporter MFP subunit; RND family efflux transporter MFP subunit complement(1026694..1027842) Ralstonia pickettii 12D 8022082 YP_002984310.1 CDS Rpic12D_4395 NC_012857.1 1027847 1029100 R PFAM: outer membrane efflux protein; KEGG: pnu:Pnuc_1302 outer membrane efflux protein; outer membrane efflux protein complement(1027847..1029100) Ralstonia pickettii 12D 8022083 YP_002984311.1 CDS Rpic12D_4396 NC_012857.1 1029375 1029776 R PFAM: transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR; KEGG: pfo:Pfl01_0677 MerR family transcriptional regulator; MerR family transcriptional regulator complement(1029375..1029776) Ralstonia pickettii 12D 8022084 YP_002984312.1 CDS Rpic12D_4397 NC_012857.1 1029878 1030300 D KEGG: pfo:Pfl01_0678 hypothetical protein; hypothetical protein 1029878..1030300 Ralstonia pickettii 12D 8022085 YP_002984313.1 CDS Rpic12D_4398 NC_012857.1 1030314 1030730 R PFAM: transport-associated; SMART: transport-associated and nodulation region; KEGG: rso:RS02375 lipoprotein transmembrane; transport-associated complement(1030314..1030730) Ralstonia pickettii 12D 8022086 YP_002984314.1 CDS Rpic12D_4399 NC_012857.1 1030792 1031262 R PFAM: DoxX family protein; KEGG: rso:RS02374 hypothetical protein; DoxX family protein complement(1030792..1031262) Ralstonia pickettii 12D 8022087 YP_002984315.1 CDS Rpic12D_4400 NC_012857.1 1031259 1032017 R KEGG: rso:RS02373 hypothetical protein; hypothetical protein complement(1031259..1032017) Ralstonia pickettii 12D 8022088 YP_002984316.1 CDS Rpic12D_4401 NC_012857.1 1032004 1032870 R PFAM: protein of unknown function DUF692; KEGG: rso:RS02372 hypothetical protein; hypothetical protein complement(1032004..1032870) Ralstonia pickettii 12D 8022089 YP_002984317.1 CDS Rpic12D_4402 NC_012857.1 1032892 1033158 R KEGG: rso:RS02371 signal peptide protein; signal peptide protein complement(1032892..1033158) Ralstonia pickettii 12D 8022090 YP_002984318.1 CDS Rpic12D_4403 NC_012857.1 1033387 1033911 R KEGG: bmj:BMULJ_01535 transcription elongation factor; transcription elongation factor complement(1033387..1033911) Ralstonia pickettii 12D 8022091 YP_002984319.1 CDS Rpic12D_4404 NC_012857.1 1034032 1034301 R KEGG: rso:RS02370 hypothetical protein; hypothetical protein complement(1034032..1034301) Ralstonia pickettii 12D 8022092 YP_002984320.1 CDS Rpic12D_4405 NC_012857.1 1034460 1035362 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: mlo:mlr3911 hypothetical protein; hypothetical protein complement(1034460..1035362) Ralstonia pickettii 12D 8022093 YP_002984321.1 CDS Rpic12D_4406 NC_012857.1 1035497 1035949 D PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: mlo:mll3910 transcriptional regulator; AsnC family transcriptional regulator 1035497..1035949 Ralstonia pickettii 12D 8022094 YP_002984322.1 CDS Rpic12D_4408 NC_012857.1 1037249 1037725 D PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: mlo:mll7935 transcriptional regulator; AsnC family transcriptional regulator 1037249..1037725 Ralstonia pickettii 12D 8022096 YP_002984323.1 CDS Rpic12D_4409 NC_012857.1 1037869 1039599 D KEGG: rso:RSp0274 gamma-glutamyltranspeptidase signal peptide protein; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 1037869..1039599 Ralstonia pickettii 12D 8022097 YP_002984324.1 CDS Rpic12D_4410 NC_012857.1 1039676 1040749 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bpy:Bphyt_6758 4-hydroxyphenylpyruvate dioxygenase; 4-hydroxyphenylpyruvate dioxygenase complement(1039676..1040749) Ralstonia pickettii 12D 8022098 YP_002984325.1 CDS Rpic12D_4411 NC_012857.1 1040831 1042021 R PFAM: major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_5897 major facilitator transporter; major facilitator superfamily protein complement(1040831..1042021) Ralstonia pickettii 12D 8022099 YP_002984326.1 CDS Rpic12D_4412 NC_012857.1 1042026 1042859 R PFAM: shikimate dehydrogenase substrate binding domain protein; shikimate/quinate 5-dehydrogenase; UBA/THIF-type NAD/FAD binding protein; KEGG: bph:Bphy_6410 shikimate dehydrogenase substrate binding subunit; shikimate dehydrogenase substrate binding domain-containing protein complement(1042026..1042859) Ralstonia pickettii 12D 8022100 YP_002984327.1 CDS Rpic12D_4413 NC_012857.1 1042879 1044264 R PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: bph:Bphy_6411 major facilitator transporter; major facilitator superfamily protein complement(1042879..1044264) Ralstonia pickettii 12D 8022101 YP_002984328.1 CDS Rpic12D_4414 NC_012857.1 1044496 1045263 R PFAM: regulatory protein IclR; transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: reu:Reut_B5034 regulatory protein, IclR; IclR family transcriptional regulator complement(1044496..1045263) Ralstonia pickettii 12D 8022102 YP_002984329.1 CDS Rpic12D_4415 NC_012857.1 1045394 1047280 D PFAM: xylose isomerase; KEGG: reu:Reut_B5035 4-hydroxyphenylpyruvate dioxygenase; 4-hydroxyphenylpyruvate dioxygenase 1045394..1047280 Ralstonia pickettii 12D 8022103 YP_002984330.1 CDS Rpic12D_4416 NC_012857.1 1047402 1048466 D PFAM: porin Gram-negative type; KEGG: reu:Reut_B5031 porin; porin 1047402..1048466 Ralstonia pickettii 12D 8022104 YP_002984331.1 CDS Rpic12D_4417 NC_012857.1 1048534 1049787 R catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit complement(1048534..1049787) Ralstonia pickettii 12D 8022105 YP_002984332.1 CDS Rpic12D_4418 NC_012857.1 1050103 1050894 R catalyzes the formation of acetaldehyde from ethanolamine; ethanolamine ammonia-lyase small subunit complement(1050103..1050894) Ralstonia pickettii 12D 8022106 YP_002984333.1 CDS Rpic12D_4419 NC_012857.1 1050915 1052297 R PFAM: ethanolamine ammonia lyase large subunit; KEGG: reh:H16_B0096 ethanolamine ammonia-lyase heavy chain; ethanolamine ammonia lyase large subunit complement(1050915..1052297) Ralstonia pickettii 12D 8022107 YP_002984334.1 CDS Rpic12D_4420 NC_012857.1 1052422 1053657 D TIGRFAM: chromate transporter chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: bxe:Bxe_B0092 chromate transporter; chromate transporter 1052422..1053657 Ralstonia pickettii 12D 8022108 YP_002984335.1 CDS Rpic12D_4421 NC_012857.1 1053708 1055105 R exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA; ATP-dependent RNA helicase DbpA complement(1053708..1055105) Ralstonia pickettii 12D 8022109 YP_002984336.1 CDS Rpic12D_4422 NC_012857.1 1055120 1055440 R KEGG: bac:BamMC406_3250 hypothetical protein; hypothetical protein complement(1055120..1055440) Ralstonia pickettii 12D 8022110 YP_002984337.1 CDS Rpic12D_4423 NC_012857.1 1055903 1057651 D PFAM: poly-beta-hydroxybutyrate polymerase domain protein; alpha/beta hydrolase fold; KEGG: eba:ebA5073 poly-beta-hydroxyalkanoate synthase; poly-beta-hydroxybutyrate polymerase domain-containing protein 1055903..1057651 Ralstonia pickettii 12D 8022111 YP_002984338.1 CDS Rpic12D_4424 NC_012857.1 1057656 1057805 D KEGG: har:HEAR2590 ABC transporter membrane protein; hypothetical protein 1057656..1057805 Ralstonia pickettii 12D 8022112 YP_002984339.1 CDS Rpic12D_4425 NC_012857.1 1057816 1058328 D KEGG: eba:ebA5072 hypothetical protein; hypothetical protein 1057816..1058328 Ralstonia pickettii 12D 8022113 YP_002984340.1 CDS Rpic12D_4426 NC_012857.1 1058338 1059783 D PFAM: phosphate acetyl/butaryl transferase; MaoC domain protein dehydratase; KEGG: har:HEAR1516 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; bifunctional enoyl-CoA hydratase/phosphate acetyltransferase 1058338..1059783 Ralstonia pickettii 12D 8022114 YP_002984341.1 CDS Rpic12D_4427 NC_012857.1 1059780 1060961 D KEGG: pla:Plav_3453 acetate kinase; TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; acetate kinase 1059780..1060961 Ralstonia pickettii 12D 8022115 YP_002984342.1 CDS Rpic12D_4428 NC_012857.1 1061391 1062890 D TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: aldehyde dehydrogenase; KEGG: bur:Bcep18194_C6772 succinate semialdehyde dehydrogenase; succinate-semialdehyde dehydrogenase 1061391..1062890 Ralstonia pickettii 12D 8022116 YP_002984343.1 CDS Rpic12D_4429 NC_012857.1 1062926 1064095 D PFAM: iron-containing alcohol dehydrogenase; KEGG: bur:Bcep18194_C6773 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 1062926..1064095 Ralstonia pickettii 12D 8022117 YP_002984344.1 CDS Rpic12D_4430 NC_012857.1 1064292 1065755 D KEGG: bur:Bcep18194_C6774 flavin-containing monooxygenase FMO; flavin-containing monooxygenase FMO 1064292..1065755 Ralstonia pickettii 12D 8022118 YP_002984345.1 CDS Rpic12D_4431 NC_012857.1 1065769 1066746 D PFAM: alpha/beta hydrolase; KEGG: bur:Bcep18194_C6775 esterase/lipase/thioesterase; alpha/beta hydrolase 1065769..1066746 Ralstonia pickettii 12D 8022119 YP_002984346.1 CDS Rpic12D_4432 NC_012857.1 1067409 1067822 D PFAM: endoribonuclease L-PSP; KEGG: bcj:BCAM0117 endoribonuclease; endoribonuclease L-PSP 1067409..1067822 Ralstonia pickettii 12D 8022120 YP_002984347.1 CDS Rpic12D_4433 NC_012857.1 1067882 1069246 D PFAM: protein of unknown function DUF1329; KEGG: reu:Reut_C6388 hypothetical protein; hypothetical protein 1067882..1069246 Ralstonia pickettii 12D 8022121 YP_002984348.1 CDS Rpic12D_4434 NC_012857.1 1069321 1071156 D PFAM: protein of unknown function DUF1302; KEGG: reu:Reut_C6389 hypothetical protein; hypothetical protein 1069321..1071156 Ralstonia pickettii 12D 8022122 YP_002984349.1 CDS Rpic12D_4435 NC_012857.1 1071220 1073580 D KEGG: reu:Reut_C6390 transporter; transporter 1071220..1073580 Ralstonia pickettii 12D 8022123 YP_002984350.1 CDS Rpic12D_4436 NC_012857.1 1073594 1074565 D KEGG: reu:Reut_C6391 BNR repeat-containing glycosyl hydrolase; BNR repeat-containing glycosyl hydrolase 1073594..1074565 Ralstonia pickettii 12D 8022124 YP_002984351.1 CDS Rpic12D_4437 NC_012857.1 1074652 1075482 D PFAM: phytanoyl-CoA dioxygenase; KEGG: reu:Reut_B5715 phytanoyl-CoA dioxygenase; phytanoyl-CoA dioxygenase 1074652..1075482 Ralstonia pickettii 12D 8022125 YP_002984352.1 CDS Rpic12D_4438 NC_012857.1 1075661 1077094 R PFAM: regulatory protein TetR; KEGG: reu:Reut_C6386 regulatory protein, TetR; TetR family transcriptional regulator complement(1075661..1077094) Ralstonia pickettii 12D 8022126 YP_002984353.1 CDS Rpic12D_4439 NC_012857.1 1077811 1079172 D PFAM: FAD dependent oxidoreductase; KEGG: reu:Reut_C6399 twin-arginine translocation pathway signal; FAD dependent oxidoreductase 1077811..1079172 Ralstonia pickettii 12D 8022127 YP_002984354.1 CDS Rpic12D_4440 NC_012857.1 1079259 1080137 D PFAM: phytanoyl-CoA dioxygenase; KEGG: bur:Bcep18194_C6790 phytanoyl-CoA dioxygenase; phytanoyl-CoA dioxygenase 1079259..1080137 Ralstonia pickettii 12D 8022128 YP_002984355.1 CDS Rpic12D_4441 NC_012857.1 1080331 1081827 D PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: reh:H16_A0831 monoamine oxidase (flavin containing); alkane oxidase 1080331..1081827 Ralstonia pickettii 12D 8022129 YP_002984356.1 CDS Rpic12D_4442 NC_012857.1 1081827 1082093 D KEGG: bcj:BCAM0113 cytochrome C precursor; hypothetical protein 1081827..1082093 Ralstonia pickettii 12D 8022130 YP_002984357.1 CDS Rpic12D_4443 NC_012857.1 1082211 1085210 D PFAM: transposase Tn3 family protein; KEGG: bvi:Bcep1808_7171 transposase Tn3 family protein; transposase Tn3 family protein 1082211..1085210 Ralstonia pickettii 12D 8022131 YP_002984358.1 CDS Rpic12D_4444 NC_012857.1 1085203 1085538 D KEGG: bvi:Bcep1808_7205 TnpC; TnpC protein 1085203..1085538 Ralstonia pickettii 12D 8022132 YP_002984359.1 CDS Rpic12D_4445 NC_012857.1 1085704 1086897 R PFAM: integrase family protein; KEGG: bmu:Bmul_5789 integrase family protein; integrase family protein complement(1085704..1086897) Ralstonia pickettii 12D 8022133 YP_002984360.1 CDS Rpic12D_4446 NC_012857.1 1086932 1087573 R KEGG: kpn:KPN_pKPN3p05907 hypothetical protein; hypothetical protein complement(1086932..1087573) Ralstonia pickettii 12D 8022134 YP_002984361.1 CDS Rpic12D_4447 NC_012857.1 1087588 1087863 R PFAM: plasmid stabilization system; KEGG: sfl:CP0218 hypothetical protein; plasmid stabilization system complement(1087588..1087863) Ralstonia pickettii 12D 8022135 YP_002984362.1 CDS Rpic12D_4448 NC_012857.1 1087863 1088126 R PFAM: CopG domain protein DNA-binding domain protein; KEGG: smd:Smed_6450 CopG family transcriptional regulator; CopG family transcriptional regulator complement(1087863..1088126) Ralstonia pickettii 12D 8022136 YP_002984363.1 CDS Rpic12D_4449 NC_012857.1 1088178 1088909 R KEGG: gvi:gll4023 unknown protein; hypothetical protein complement(1088178..1088909) Ralstonia pickettii 12D 8022137 YP_002984364.1 CDS Rpic12D_4450 NC_012857.1 1089123 1090160 D KEGG: reh:PHG105 KfrA protein; KfrA protein 1089123..1090160 Ralstonia pickettii 12D 8022138 YP_002984365.1 CDS Rpic12D_4451 NC_012857.1 1090203 1090709 D PFAM: cytochrome C class I; KEGG: reu:Reut_C6402 cytochrome C, class I; cytochrome C class I 1090203..1090709 Ralstonia pickettii 12D 8022139 YP_002984366.1 CDS Rpic12D_4452 NC_012857.1 1090745 1092241 D PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: reh:H16_A0845 L-amino-acid oxidase; alkane oxidase 1090745..1092241 Ralstonia pickettii 12D 8022140 YP_002984367.1 CDS Rpic12D_4453 NC_012857.1 1092241 1092921 D PFAM: cytochrome C class I; KEGG: bch:Bcen2424_5813 cytochrome C, class I; cytochrome C class I 1092241..1092921 Ralstonia pickettii 12D 8022141 YP_002984368.1 CDS Rpic12D_4454 NC_012857.1 1092988 1093677 D KEGG: bur:Bcep18194_C6792 hypothetical protein; hypothetical protein 1092988..1093677 Ralstonia pickettii 12D 8022142 YP_002984369.1 CDS Rpic12D_4455 NC_012857.1 1093752 1094399 D PFAM: regulatory protein TetR; KEGG: rso:RSc0698 transcription regulator protein; TetR family transcriptional regulator 1093752..1094399 Ralstonia pickettii 12D 8022143 YP_002984370.1 CDS Rpic12D_4456 NC_012857.1 1094615 1094887 R hypothetical protein complement(1094615..1094887) Ralstonia pickettii 12D 8022144 YP_002984371.1 CDS Rpic12D_4457 NC_012857.1 1094929 1096620 R activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase complement(1094929..1096620) Ralstonia pickettii 12D 8022145 YP_002984372.1 CDS Rpic12D_4458 NC_012857.1 1096660 1097376 R KEGG: bur:Bcep18194_C6850 hypothetical protein; hypothetical protein complement(1096660..1097376) Ralstonia pickettii 12D 8022146 YP_002984373.1 CDS Rpic12D_4459 NC_012857.1 1097400 1099082 R PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: bur:Bcep18194_C6848 glucose-methanol-choline oxidoreductase; glucose-methanol-choline oxidoreductase complement(1097400..1099082) Ralstonia pickettii 12D 8022147 YP_002984374.1 CDS Rpic12D_4460 NC_012857.1 1099113 1100534 R PFAM: aldehyde dehydrogenase; KEGG: bur:Bcep18194_C6847 aldehyde dehydrogenase; aldehyde dehydrogenase complement(1099113..1100534) Ralstonia pickettii 12D 8022148 YP_002984375.1 CDS Rpic12D_4461 NC_012857.1 1100642 1101598 R PFAM: alpha/beta hydrolase fold; KEGG: bur:Bcep18194_C6846 alpha/beta hydrolase; alpha/beta hydrolase complement(1100642..1101598) Ralstonia pickettii 12D 8022149 YP_002984376.1 CDS Rpic12D_4462 NC_012857.1 1101601 1103127 R KEGG: bur:Bcep18194_C6845 flavin-containing monooxygenase FMO; flavin-containing monooxygenase FMO complement(1101601..1103127) Ralstonia pickettii 12D 8022150 YP_002984377.1 CDS Rpic12D_4463 NC_012857.1 1103339 1103977 R hypothetical protein complement(1103339..1103977) Ralstonia pickettii 12D 8022151 YP_002984378.1 CDS Rpic12D_4464 NC_012857.1 1104189 1104731 R KEGG: mms:mma_1788 hypothetical protein; hypothetical protein complement(1104189..1104731) Ralstonia pickettii 12D 8022152 YP_002984379.1 CDS Rpic12D_4465 NC_012857.1 1104864 1105163 D hypothetical protein 1104864..1105163 Ralstonia pickettii 12D 8022153 YP_002984380.1 CDS Rpic12D_4466 NC_012857.1 1105163 1106305 D PFAM: replication initiation factor; KEGG: aav:Aave_2390 replication initiation factor; replication initiation factor 1105163..1106305 Ralstonia pickettii 12D 8022154 YP_002984381.1 CDS Rpic12D_4467 NC_012857.1 1106309 1106626 D KEGG: neu:NE0889 hypothetical protein; hypothetical protein 1106309..1106626 Ralstonia pickettii 12D 8022155 YP_002984382.1 CDS Rpic12D_4468 NC_012857.1 1106626 1106778 D hypothetical protein 1106626..1106778 Ralstonia pickettii 12D 8022156 YP_002984383.1 CDS Rpic12D_4469 NC_012857.1 1106790 1107050 D hypothetical protein 1106790..1107050 Ralstonia pickettii 12D 8022157 YP_002984384.1 CDS Rpic12D_4470 NC_012857.1 1107306 1107524 D hypothetical protein 1107306..1107524 Ralstonia pickettii 12D 8022158 YP_002984385.1 CDS Rpic12D_4471 NC_012857.1 1107595 1109193 D KEGG: Hypothetical protein CBG08535; hypothetical protein 1107595..1109193 Ralstonia pickettii 12D 8022159 YP_002984386.1 CDS Rpic12D_4472 NC_012857.1 1109202 1109531 D KEGG: xcv:XCV2464 filamentous phage phiLf protein VI; filamentous phage phiLf protein VI 1109202..1109531 Ralstonia pickettii 12D 8022160 YP_002984387.1 CDS Rpic12D_4473 NC_012857.1 1109538 1110884 D PFAM: hypothetical protein; KEGG: xcb:XC_2117 Pi protein; hypothetical protein 1109538..1110884 Ralstonia pickettii 12D 8022161 YP_002984388.1 CDS Rpic12D_4474 NC_012857.1 1110975 1111088 D hypothetical protein 1110975..1111088 Ralstonia pickettii 12D 8022162 YP_002984389.1 CDS Rpic12D_4475 NC_012857.1 1111091 1111585 D PFAM: HMG-I and HMG-Y DNA-binding domain protein; KEGG: bte:BTH_I3270 hypothetical protein; HMG-I and HMG-Y DNA-binding domain-containing protein 1111091..1111585 Ralstonia pickettii 12D 8022163 YP_002984390.1 CDS Rpic12D_4476 NC_012857.1 1111853 1112362 R KEGG: swd:Swoo_0396 hypothetical protein; hypothetical protein complement(1111853..1112362) Ralstonia pickettii 12D 8022164 YP_002984391.1 CDS Rpic12D_4477 NC_012857.1 1112885 1113028 R hypothetical protein complement(1112885..1113028) Ralstonia pickettii 12D 8022165 YP_002984392.1 CDS Rpic12D_4478 NC_012857.1 1113099 1116128 R PFAM: transposase Tn3 family protein; KEGG: pap:PSPA7_5340 transposase; transposase Tn3 family protein complement(1113099..1116128) Ralstonia pickettii 12D 8022166 YP_002984393.1 CDS Rpic12D_4479 NC_012857.1 1116125 1116718 R PFAM: Resolvase domain; KEGG: pap:PSPA7_5339 DNA-invertase; resolvase complement(1116125..1116718) Ralstonia pickettii 12D 8022167 YP_002984394.1 CDS Rpic12D_4480 NC_012857.1 1116957 1117235 D KEGG: rme:Rmet_6342 hypothetical protein; hypothetical protein 1116957..1117235 Ralstonia pickettii 12D 8022168 YP_002984395.1 CDS Rpic12D_4481 NC_012857.1 1117232 1117516 D TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: rme:Rmet_6341 addiction module toxin, RelE/StbE; RelE/StbE family addiction module toxin 1117232..1117516 Ralstonia pickettii 12D 8022169 YP_002984396.1 CDS Rpic12D_4482 NC_012857.1 1117923 1118483 D KEGG: rme:Rmet_6340 hypothetical protein; hypothetical protein 1117923..1118483 Ralstonia pickettii 12D 8022170 YP_002984397.1 CDS Rpic12D_4483 NC_012857.1 1118491 1118973 D PFAM: cupin; KEGG: rme:Rmet_6339 cupin 2, conserved barrel; cupin 1118491..1118973 Ralstonia pickettii 12D 8022171 YP_002984398.1 CDS Rpic12D_4484 NC_012857.1 1119240 1119917 R hypothetical protein complement(1119240..1119917) Ralstonia pickettii 12D 8022172 YP_002984399.1 CDS Rpic12D_4485 NC_012857.1 1119895 1121946 R PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: npu:Npun_R6592 type I phosphodiesterase/nucleotide pyrophosphatase; type I phosphodiesterase/nucleotide pyrophosphatase complement(1119895..1121946) Ralstonia pickettii 12D 8022173 YP_002984400.1 CDS Rpic12D_4486 NC_012857.1 1122533 1123498 D PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: bvi:Bcep1808_5897 MerR family transcriptional regulator; MerR family transcriptional regulator 1122533..1123498 Ralstonia pickettii 12D 8022174 YP_002984401.1 CDS Rpic12D_4487 NC_012857.1 1123611 1124363 D PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: bmj:BMULJ_05681 short-chain alcohol dehydrogenase; short-chain dehydrogenase/reductase SDR 1123611..1124363 Ralstonia pickettii 12D 8022175 YP_002984402.1 CDS Rpic12D_4488 NC_012857.1 1124360 1124815 D KEGG: bmj:BMULJ_05682 hypothetical protein; hypothetical protein 1124360..1124815 Ralstonia pickettii 12D 8022176 YP_002984403.1 CDS Rpic12D_4489 NC_012857.1 1124845 1125321 D TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: rso:RSc1996 transmembrane succinate dehydrogenase (cytochrome b-556 subunit) oxidoreductase protein; succinate dehydrogenase, cytochrome b556 subunit 1124845..1125321 Ralstonia pickettii 12D 8022177 YP_002984404.1 CDS Rpic12D_4490 NC_012857.1 1125332 1125697 D TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: rso:RSc1995 transmembrane succinate dehydrogenase (hydrophobic membrane anchor subunit) oxidoreductase protein; succinate dehydrogenase, hydrophobic membrane anchor protein 1125332..1125697 Ralstonia pickettii 12D 8022178 YP_002984405.1 CDS sdhA NC_012857.1 1125701 1127479 D part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 1125701..1127479 Ralstonia pickettii 12D 8022179 YP_002984406.1 CDS sdhB NC_012857.1 1127502 1128203 D part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 1127502..1128203 Ralstonia pickettii 12D 8022180 YP_002984407.1 CDS Rpic12D_4493 NC_012857.1 1128354 1129085 R KEGG: bur:Bcep18194_C6587 hypothetical protein; hypothetical protein complement(1128354..1129085) Ralstonia pickettii 12D 8022181 YP_002984408.1 CDS Rpic12D_4494 NC_012857.1 1129082 1129792 R TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: bur:Bcep18194_C6588 sigma-24 (FecI-like); ECF subfamily RNA polymerase sigma-24 subunit complement(1129082..1129792) Ralstonia pickettii 12D 8022182 YP_002984409.1 CDS Rpic12D_4495 NC_012857.1 1129857 1130441 R PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin; KEGG: aav:Aave_3256 beta-Ig-H3/fasciclin; beta-Ig-H3/fasciclin complement(1129857..1130441) Ralstonia pickettii 12D 8022183 YP_002984410.1 CDS Rpic12D_4496 NC_012857.1 1130948 1131529 D KEGG: pna:Pnap_3162 globin; hypothetical protein 1130948..1131529 Ralstonia pickettii 12D 8022184 YP_002984411.1 CDS Rpic12D_4497 NC_012857.1 1131640 1132212 D hypothetical protein 1131640..1132212 Ralstonia pickettii 12D 8022185 YP_002984412.1 CDS Rpic12D_4498 NC_012857.1 1132482 1132952 D KEGG: reh:H16_A1984 hypothetical protein; hypothetical protein 1132482..1132952 Ralstonia pickettii 12D 8022186 YP_002984413.1 CDS Rpic12D_4499 NC_012857.1 1133075 1134250 R TIGRFAM: efflux transporter RND family, MFP subunit; KEGG: bph:Bphy_6250 RND family efflux transporter MFP subunit; RND family efflux transporter MFP subunit complement(1133075..1134250) Ralstonia pickettii 12D 8022187 YP_002984414.1 CDS Rpic12D_4500 NC_012857.1 1134247 1136616 R PFAM: protein of unknown function DUF214; KEGG: bte:BTH_II0063 permease domain-containing protein; hypothetical protein complement(1134247..1136616) Ralstonia pickettii 12D 8022188 YP_002984415.1 CDS Rpic12D_4501 NC_012857.1 1136610 1137314 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: bph:Bphy_6252 ABC transporter; ABC transporter complement(1136610..1137314) Ralstonia pickettii 12D 8022189 YP_002984416.1 CDS Rpic12D_4502 NC_012857.1 1137329 1137619 R KEGG: rso:RS00827 hypothetical protein; hypothetical protein complement(1137329..1137619) Ralstonia pickettii 12D 8022190 YP_002984417.1 CDS Rpic12D_4503 NC_012857.1 1137853 1138497 R KEGG: rso:RSc0198 hypothetical protein; hypothetical protein complement(1137853..1138497) Ralstonia pickettii 12D 8022191 YP_002984418.1 CDS Rpic12D_4504 NC_012857.1 1138503 1140794 R TIGRFAM: ATPase P; ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; hemerythrin HHE cation binding domain protein; KEGG: reu:Reut_A1234 ATPase, E1-E2 type:heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase:heavy metal translocating P-type ATPase; ATPase P complement(1138503..1140794) Ralstonia pickettii 12D 8022192 YP_002984419.1 CDS Rpic12D_4505 NC_012857.1 1140830 1141354 R PFAM: cytochrome B561; KEGG: rso:RSc0199 cytochrome b561 cytochrome transmembrane protein; cytochrome B561 complement(1140830..1141354) Ralstonia pickettii 12D 8022193 YP_002984420.1 CDS Rpic12D_4506 NC_012857.1 1141400 1142656 R KEGG: reu:Reut_B5656 hypothetical protein; hypothetical protein complement(1141400..1142656) Ralstonia pickettii 12D 8022194 YP_002984421.1 CDS Rpic12D_4507 NC_012857.1 1142653 1145766 R TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: reu:Reut_B5655 heavy metal efflux pump CzcA; CzcA family heavy metal efflux pump complement(1142653..1145766) Ralstonia pickettii 12D 8022195 YP_002984422.1 CDS Rpic12D_4508 NC_012857.1 1145766 1146851 R TIGRFAM: efflux transporter RND family, MFP subunit; KEGG: reu:Reut_B5654 secretion protein HlyD; RND family efflux transporter MFP subunit complement(1145766..1146851) Ralstonia pickettii 12D 8022196 YP_002984423.1 CDS Rpic12D_4509 NC_012857.1 1147150 1147620 R KEGG: rme:Rmet_5683 hypothetical protein; hypothetical protein complement(1147150..1147620) Ralstonia pickettii 12D 8022197 YP_002984424.1 CDS Rpic12D_4510 NC_012857.1 1147758 1149314 R catalyzes the formation of thymine and 2-deoxy-alpha-D-ribose 1-phosphate from thymidine; thymidine phosphorylase complement(1147758..1149314) Ralstonia pickettii 12D 8022198 YP_002984425.1 CDS Rpic12D_4511 NC_012857.1 1149316 1149594 R PFAM: protein of unknown function DUF1488; KEGG: rso:RSc0203 hypothetical protein; hypothetical protein complement(1149316..1149594) Ralstonia pickettii 12D 8022199 YP_002984426.1 CDS Rpic12D_4512 NC_012857.1 1149624 1150565 R Catalyzes the formation of PRPP from ATP and ribose 5-phosphate; phosphoribosylpyrophosphate synthetase complement(1149624..1150565) Ralstonia pickettii 12D 8022200 YP_002984427.1 CDS Rpic12D_4513 NC_012857.1 1150562 1151926 R PFAM: beta-lactamase; RNA-metabolising metallo-beta-lactamase; KEGG: rso:RSc0201 hypothetical protein; beta-lactamase complement(1150562..1151926) Ralstonia pickettii 12D 8022201 YP_002984428.1 CDS Rpic12D_4514 NC_012857.1 1151945 1152367 R PFAM: heat shock protein Hsp20; KEGG: rso:RSc0200 small heat shock protein; heat shock protein Hsp20 complement(1151945..1152367) Ralstonia pickettii 12D 8022202 YP_002984429.1 CDS Rpic12D_4515 NC_012857.1 1152707 1153207 D KEGG: bmj:BMULJ_05653 cell wall-associated hydrolase; cell wall-associated hydrolase 1152707..1153207 Ralstonia pickettii 12D 8022203 YP_002984430.1 CDS Rpic12D_4516 NC_012857.1 1153222 1153443 D KEGG: bcm:Bcenmc03_6863 hypothetical protein; hypothetical protein 1153222..1153443 Ralstonia pickettii 12D 8022204 YP_002984431.1 CDS Rpic12D_4517 NC_012857.1 1153549 1155540 D KEGG: reu:Reut_C6194 FtsH-2 peptidase; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: ATPase AAA; peptidase M41; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; ATP-dependent metalloprotease FtsH 1153549..1155540 Ralstonia pickettii 12D 8022205 YP_002984432.1 CDS Rpic12D_4518 NC_012857.1 1155532 1156818 R PFAM: erythromycin esterase; KEGG: reu:Reut_B5196 erythromycin esterase; erythromycin esterase complement(1155532..1156818) Ralstonia pickettii 12D 8022206 YP_002984433.1 CDS Rpic12D_4519 NC_012857.1 1157086 1157586 D KEGG: reu:Reut_B5193 hypothetical protein; hypothetical protein 1157086..1157586 Ralstonia pickettii 12D 8022207 YP_002984434.1 CDS Rpic12D_4520 NC_012857.1 1157719 1158651 R KEGG: bvi:Bcep1808_6309 6-phosphofructokinase; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; 1-phosphofructokinase complement(1157719..1158651) Ralstonia pickettii 12D 8022208 YP_002984435.1 CDS Rpic12D_4521 NC_012857.1 1158861 1159124 D KEGG: bph:Bphy_1093 hypothetical protein; hypothetical protein 1158861..1159124 Ralstonia pickettii 12D 8022209 YP_002984436.1 CDS Rpic12D_4522 NC_012857.1 1159173 1161572 D KEGG: reu:Reut_A1162 phosphoenolpyruvate synthase; TIGRFAM: phosphoenolpyruvate synthase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; PEP-utilizing protein; phosphoenolpyruvate synthase 1159173..1161572 Ralstonia pickettii 12D 8022210 YP_002984437.1 CDS Rpic12D_4523 NC_012857.1 1161600 1164260 R TIGRFAM: formate dehydrogenase, subunit alpha; PFAM: molybdopterin oxidoreductase; ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: sen:SACE_2432 formate dehydrogenase, subunit alpha; formate dehydrogenase subunit alpha complement(1161600..1164260) Ralstonia pickettii 12D 8022211 YP_002984438.1 CDS Rpic12D_4524 NC_012857.1 1164248 1165825 R PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: swi:Swit_1474 NADH dehydrogenase (quinone); NADH dehydrogenase (quinone) complement(1164248..1165825) Ralstonia pickettii 12D 8022212 YP_002984439.1 CDS Rpic12D_4525 NC_012857.1 1165920 1166150 D hypothetical protein 1165920..1166150 Ralstonia pickettii 12D 8022213 YP_002984440.1 CDS Rpic12D_4526 NC_012857.1 1166637 1168385 D PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: bpm:BURPS1710b_1485 two-component hybrid sensor and regulator; histidine kinase 1166637..1168385 Ralstonia pickettii 12D 8022214 YP_002984441.1 CDS Rpic12D_4528 NC_012857.1 1168930 1169475 D PFAM: heat shock protein Hsp20; KEGG: bte:BTH_II0924 heat shock protein; heat shock protein Hsp20 1168930..1169475 Ralstonia pickettii 12D 8022216 YP_002984442.1 CDS Rpic12D_4529 NC_012857.1 1169690 1170031 D KEGG: bte:BTH_I2124 sigma 54 modulation protein; hypothetical protein 1169690..1170031 Ralstonia pickettii 12D 8022217 YP_002984443.1 CDS Rpic12D_4530 NC_012857.1 1170028 1170276 D hypothetical protein 1170028..1170276 Ralstonia pickettii 12D 8022218 YP_002984444.1 CDS Rpic12D_4531 NC_012857.1 1170349 1171014 R KEGG: bte:BTH_II1308 hypothetical protein; hypothetical protein complement(1170349..1171014) Ralstonia pickettii 12D 8022219 YP_002984445.1 CDS Rpic12D_4532 NC_012857.1 1171088 1171243 D hypothetical protein 1171088..1171243 Ralstonia pickettii 12D 8022220 YP_002984446.1 CDS Rpic12D_4533 NC_012857.1 1171246 1172883 D TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: reh:H16_A1997 chaperonin GroEL (HSP60 family); chaperonin GroEL 1171246..1172883 Ralstonia pickettii 12D 8022221 YP_002984447.1 CDS Rpic12D_4534 NC_012857.1 1172946 1173383 D hypothetical protein 1172946..1173383 Ralstonia pickettii 12D 8022222 YP_002984448.1 CDS Rpic12D_4535 NC_012857.1 1173400 1173783 D hypothetical protein 1173400..1173783 Ralstonia pickettii 12D 8022223 YP_002984449.1 CDS Rpic12D_4536 NC_012857.1 1173800 1175617 R class I; catalyzes the formation of deoxyribonucleotides from their corresponding ribonucleotides; ribonucleotide reductase-like protein complement(1173800..1175617) Ralstonia pickettii 12D 8022224 YP_002984450.1 CDS Rpic12D_4537 NC_012857.1 1175855 1176343 D KEGG: rso:RSc0193 hypothetical protein; hypothetical protein 1175855..1176343 Ralstonia pickettii 12D 8022225 YP_002984451.1 CDS Rpic12D_4538 NC_012857.1 1176557 1176919 D KEGG: reu:Reut_B4032 signal peptide protein; signal peptide protein 1176557..1176919 Ralstonia pickettii 12D 8022226 YP_002984452.1 CDS Rpic12D_4539 NC_012857.1 1176972 1179362 R PFAM: conserved hypothetical protein; beta-lactamase; KEGG: bte:BTH_II0925 beta-lactamase; hypothetical protein complement(1176972..1179362) Ralstonia pickettii 12D 8022227 YP_002984453.1 CDS Rpic12D_4540 NC_012857.1 1179317 1180600 R PFAM: protein of unknown function DUF187; KEGG: bvi:Bcep1808_6307 hypothetical protein; hypothetical protein complement(1179317..1180600) Ralstonia pickettii 12D 8022228 YP_002984454.1 CDS Rpic12D_4541 NC_012857.1 1180572 1181363 R PFAM: polysaccharide deacetylase; KEGG: bac:BamMC406_6214 polysaccharide deacetylase; polysaccharide deacetylase complement(1180572..1181363) Ralstonia pickettii 12D 8022229 YP_002984455.1 CDS Rpic12D_4542 NC_012857.1 1181416 1182009 R PFAM: rhomboid family protein; KEGG: rso:RS02331 hypothetical protein; rhomboid family protein complement(1181416..1182009) Ralstonia pickettii 12D 8022230 YP_002984456.1 CDS Rpic12D_4543 NC_012857.1 1182190 1183938 D PFAM: PHP domain protein; SMART: DNA polymerase X; phosphoesterase PHP domain protein; Helix-hairpin-helix DNA-binding class 1; KEGG: mca:MCA1213 hypothetical protein; PHP domain-containing protein 1182190..1183938 Ralstonia pickettii 12D 8022231 YP_002984457.1 CDS Rpic12D_4544 NC_012857.1 1184100 1184417 D KEGG: bmv:BMASAVP1_A1952 ribosomal subunit interface protein; ribosomal subunit interface protein 1184100..1184417 Ralstonia pickettii 12D 8022232 YP_002984458.1 CDS Rpic12D_4545 NC_012857.1 1184441 1185187 R TIGRFAM: acetoacetyl-CoA reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: cti:RALTA_A1758 acetoacetyl-CoA reductase; acetoacetyl-CoA reductase complement(1184441..1185187) Ralstonia pickettii 12D 8022233 YP_002984459.1 CDS Rpic12D_4546 NC_012857.1 1185195 1185698 R KEGG: reu:Reut_A1232 hypothetical protein; hypothetical protein complement(1185195..1185698) Ralstonia pickettii 12D 8022234 YP_002984460.1 CDS Rpic12D_4547 NC_012857.1 1185707 1186360 R PFAM: nitroreductase; KEGG: bma:BMAA2034 hypothetical protein; nitroreductase complement(1185707..1186360) Ralstonia pickettii 12D 8022235 YP_002984461.1 CDS Rpic12D_4548 NC_012857.1 1186408 1187475 R PFAM: alcohol dehydrogenase GroES domain protein; alcohol dehydrogenase zinc-binding domain protein; KEGG: rso:RSc0194 zinc-dependent alcohol dehydrogenase oxidoreductase protein; alcohol dehydrogenase GroES domain-containing protein complement(1186408..1187475) Ralstonia pickettii 12D 8022236 YP_002984462.1 CDS Rpic12D_4549 NC_012857.1 1187573 1189123 D KEGG: rme:Rmet_5125 hypothetical protein; hypothetical protein 1187573..1189123 Ralstonia pickettii 12D 8022237 YP_002984463.1 CDS Rpic12D_4550 NC_012857.1 1189309 1189797 D KEGG: rso:RSc0193 hypothetical protein; hypothetical protein 1189309..1189797 Ralstonia pickettii 12D 8022238 YP_002984464.1 CDS Rpic12D_4551 NC_012857.1 1189820 1190284 D PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: reh:H16_A2015 signal-transduction protein; signal transduction protein with CBS domains 1189820..1190284 Ralstonia pickettii 12D 8022239 YP_002984465.1 CDS Rpic12D_4552 NC_012857.1 1190325 1191008 D KEGG: reu:Reut_A1157 hypothetical protein; hypothetical protein 1190325..1191008 Ralstonia pickettii 12D 8022240 YP_002984466.1 CDS Rpic12D_4553 NC_012857.1 1191013 1191663 D KEGG: reh:H16_A1999 phosphoribosyl transferase; phosphoribosyl transferase 1191013..1191663 Ralstonia pickettii 12D 8022241 YP_002984467.1 CDS Rpic12D_4554 NC_012857.1 1191704 1194331 R TIGRFAM: magnesium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; haloacid dehalogenase; KEGG: bxe:Bxe_B2642 magnesium-translocating P-type ATPase; magnesium-translocating P-type ATPase complement(1191704..1194331) Ralstonia pickettii 12D 8022242 YP_002984468.1 CDS Rpic12D_4555 NC_012857.1 1194552 1196027 R TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: reu:Reut_A1225 RND efflux system, outer membrane lipoprotein, NodT; NodT family RND efflux system outer membrane lipoprotein complement(1194552..1196027) Ralstonia pickettii 12D 8022243 YP_002984469.1 CDS Rpic12D_4556 NC_012857.1 1196024 1197109 R PFAM: secretion protein HlyD; KEGG: reu:Reut_A1224 secretion protein HlyD; secretion protein HlyD complement(1196024..1197109) Ralstonia pickettii 12D 8022244 YP_002984470.1 CDS Rpic12D_4557 NC_012857.1 1197106 1197804 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: reu:Reut_A1223 ABC transporter; ABC transporter complement(1197106..1197804) Ralstonia pickettii 12D 8022245 YP_002984471.1 CDS Rpic12D_4558 NC_012857.1 1197807 1198943 R PFAM: protein of unknown function DUF214; KEGG: reu:Reut_A1222 hypothetical protein; hypothetical protein complement(1197807..1198943) Ralstonia pickettii 12D 8022246 YP_002984472.1 CDS Rpic12D_4559 NC_012857.1 1199088 1199735 R PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: rso:RSc0192 response regulator transcription regulator protein; LuxR family transcriptional regulator complement(1199088..1199735) Ralstonia pickettii 12D 8022247 YP_002984473.1 CDS Rpic12D_4560 NC_012857.1 1199732 1201120 R KEGG: rso:RSc0191 transmembrane two component system sensor kinase transcription regulator protein; TIGRFAM: PAS sensor protein; PFAM: histidine kinase dimerisation and phosphoacceptor region; PAS fold domain protein; hypothetical protein; ATP-binding region ATPase domain protein; SMART: PAS domain containing protein; ATP-binding region ATPase domain protein; PAS/PAC sensor signal transduction histidine kinase complement(1199732..1201120) Ralstonia pickettii 12D 8022248 YP_002984474.1 CDS Rpic12D_4561 NC_012857.1 1201375 1202166 D PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; cyclic nucleotide-binding; KEGG: rso:RSc0190 transcription regulator protein; Crp/Fnr family transcriptional regulator 1201375..1202166 Ralstonia pickettii 12D 8022249 YP_002984475.1 CDS Rpic12D_4562 NC_012857.1 1202245 1202892 R PFAM: transport-associated; SMART: transport-associated and nodulation region; KEGG: rso:RSc0189 hypothetical protein; transport-associated complement(1202245..1202892) Ralstonia pickettii 12D 8022250 YP_002984476.1 CDS Rpic12D_4563 NC_012857.1 1202923 1203285 R PFAM: zinc finger DksA/TraR C4-type; KEGG: rso:RSc1511 hypothetical protein; TraR/DksA family transcriptional regulator complement(1202923..1203285) Ralstonia pickettii 12D 8022251 YP_002984477.1 CDS Rpic12D_4564 NC_012857.1 1203333 1203863 R KEGG: rso:RSc0187 hypothetical protein; hypothetical protein complement(1203333..1203863) Ralstonia pickettii 12D 8022252 YP_002984478.1 CDS Rpic12D_4565 NC_012857.1 1203910 1204563 R PFAM: transport-associated; SMART: transport-associated and nodulation region; KEGG: rso:RSc0186 hypothetical protein; transport-associated complement(1203910..1204563) Ralstonia pickettii 12D 8022253 YP_002984479.1 CDS Rpic12D_4566 NC_012857.1 1204597 1205436 R PFAM: UspA domain protein; KEGG: rso:RSc0185 hypothetical protein; UspA domain-containing protein complement(1204597..1205436) Ralstonia pickettii 12D 8022254 YP_002984480.1 CDS Rpic12D_4567 NC_012857.1 1205477 1205977 R PFAM: UspA domain protein; KEGG: rso:RSc0184 hypothetical protein; UspA domain-containing protein complement(1205477..1205977) Ralstonia pickettii 12D 8022255 YP_002984481.1 CDS Rpic12D_4568 NC_012857.1 1206264 1206731 D PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: rso:RSc0183 hypothetical protein; signal transduction protein with CBS domains 1206264..1206731 Ralstonia pickettii 12D 8022256 YP_002984482.1 CDS Rpic12D_4569 NC_012857.1 1206728 1208173 R KEGG: rso:RSc0182 hypothetical protein; hypothetical protein complement(1206728..1208173) Ralstonia pickettii 12D 8022257 YP_002984483.1 CDS Rpic12D_4570 NC_012857.1 1208327 1209337 D TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: alcohol dehydrogenase GroES domain protein; KEGG: rso:RSc1505 alcohol dehydrogenase-like oxidoreductase protein; zinc-binding alcohol dehydrogenase family protein 1208327..1209337 Ralstonia pickettii 12D 8022258 YP_002984484.1 CDS Rpic12D_4571 NC_012857.1 1209418 1209873 D PFAM: UspA domain protein; KEGG: rso:RSc0179 hypothetical protein; UspA domain-containing protein 1209418..1209873 Ralstonia pickettii 12D 8022259 YP_002984485.1 CDS Rpic12D_4573 NC_012857.1 1210330 1211223 D KEGG: cti:RALTA_A1535 glutamine amidotransferases class-II (Gn-AT), YafJ-type; glutamine amidotransferase class-II (Gn-AT), YafJ-type 1210330..1211223 Ralstonia pickettii 12D 8022261 YP_002984486.1 CDS Rpic12D_4574 NC_012857.1 1211467 1217316 D KEGG: rso:RSp0994 excinuclease ABC subunit A; TIGRFAM: excinuclease ABC subunit A; PFAM: ABC transporter; SMART: ATPase AAA; excinuclease ABC subunit A 1211467..1217316 Ralstonia pickettii 12D 8022262 YP_002984487.1 CDS Rpic12D_4575 NC_012857.1 1217514 1219550 D PFAM: flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; flagellar hook-associated protein 2 domain protein; KEGG: rso:RSp0383 flagellar hook-associated protein 2; flagellar hook-associated 2 domain-containing protein 1217514..1219550 Ralstonia pickettii 12D 8022263 YP_002984488.1 CDS Rpic12D_4576 NC_012857.1 1219754 1219888 R hypothetical protein complement(1219754..1219888) Ralstonia pickettii 12D 8022264 YP_002984489.1 CDS Rpic12D_4577 NC_012857.1 1219922 1220413 D KEGG: bvi:Bcep1808_5441 hypothetical protein; hypothetical protein 1219922..1220413 Ralstonia pickettii 12D 8022265 YP_002984490.1 CDS Rpic12D_4578 NC_012857.1 1220543 1223269 R PFAM: cell divisionFtsK/SpoIIIE; SMART: ATPase AAA; KEGG: rso:RS01655 hypothetical protein; cell division protein FtsK complement(1220543..1223269) Ralstonia pickettii 12D 8022266 YP_002984491.1 CDS Rpic12D_4579 NC_012857.1 1223420 1224721 R PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSp0834 hexuronate transporter transmembrane protein; major facilitator superfamily protein complement(1223420..1224721) Ralstonia pickettii 12D 8022267 YP_002984492.1 CDS Rpic12D_4580 NC_012857.1 1224774 1225676 R PFAM: SMP-30/gluconolaconase/LRE domain protein; KEGG: rso:RS05363 hypothetical protein; SMP-30/gluconolaconase/LRE domain-containing protein complement(1224774..1225676) Ralstonia pickettii 12D 8022268 YP_002984493.1 CDS Rpic12D_4581 NC_012857.1 1225681 1226526 R PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; short-chain dehydrogenase/reductase SDR; KEGG: rso:RS05364 hypothetical protein; NAD-dependent epimerase/dehydratase complement(1225681..1226526) Ralstonia pickettii 12D 8022269 YP_002984494.1 CDS Rpic12D_4582 NC_012857.1 1226528 1228129 R KEGG: rso:RSp0830 D-galactarate dehydratase; TIGRFAM: galactarate dehydratase; PFAM: D-galactarate dehydratase/altronate hydrolase domain protein; SAF domain protein; galactarate dehydratase complement(1226528..1228129) Ralstonia pickettii 12D 8022270 YP_002984495.1 CDS Rpic12D_4583 NC_012857.1 1228171 1229580 R PFAM: mandelate racemase/muconate lactonizing protein; KEGG: rso:RSp0829 glucarate dehydratase protein; mandelate racemase/muconate lactonizing protein complement(1228171..1229580) Ralstonia pickettii 12D 8022271 YP_002984496.1 CDS Rpic12D_4584 NC_012857.1 1229599 1230951 R TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1; KEGG: rso:RSp0828 glucarate transporter (D-glucarate permease) transmembrane protein; d-galactonate transporter complement(1229599..1230951) Ralstonia pickettii 12D 8022272 YP_002984497.1 CDS Rpic12D_4585 NC_012857.1 1231052 1232623 R PFAM: aldehyde dehydrogenase; KEGG: rso:RS05368 ketoglutarate semialdehyde dehydrogenase protein; aldehyde dehydrogenase complement(1231052..1232623) Ralstonia pickettii 12D 8022273 YP_002984498.1 CDS Rpic12D_4586 NC_012857.1 1232651 1233589 R catalyzes the formation of 2,5-dioxopentanoate from 5-dehydro-4-deoxy-D-glucarate; 5-dehydro-4-deoxyglucarate dehydratase complement(1232651..1233589) Ralstonia pickettii 12D 8022274 YP_002984499.1 CDS Rpic12D_4587 NC_012857.1 1233929 1234825 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RS05372 transcription regulator protein; LysR family transcriptional regulator 1233929..1234825 Ralstonia pickettii 12D 8022275 YP_002984500.1 CDS Rpic12D_4588 NC_012857.1 1234881 1235246 D KEGG: cti:RALTA_B2121 conserved hypothetical protein; exported protein; hypothetical protein 1234881..1235246 Ralstonia pickettii 12D 8022276 YP_002984501.1 CDS Rpic12D_4589 NC_012857.1 1235243 1236184 R TIGRFAM: aliphatic sulfonates family ABC transporter periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: cti:RALTA_B0796 alkanesulfonate transporter, ABC superfamily, peri_binding component; aliphatic sulfonate ABC transporter substrate-binding protein complement(1235243..1236184) Ralstonia pickettii 12D 8022277 YP_002984502.1 CDS Rpic12D_4590 NC_012857.1 1236210 1237376 R PFAM: cytochrome C class I; KEGG: cti:RALTA_B1568 conserved hypothetical protein, haem motif; cytochrome C class I complement(1236210..1237376) Ralstonia pickettii 12D 8022278 YP_002984503.1 CDS Rpic12D_4591 NC_012857.1 1237391 1238188 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: reh:H16_B1868 ABC-type sulfonate transporter ATPase component; ABC transporter complement(1237391..1238188) Ralstonia pickettii 12D 8022279 YP_002984504.1 CDS Rpic12D_4592 NC_012857.1 1238182 1239219 R PFAM: binding-protein-dependent transporters inner membrane component; KEGG: rme:Rmet_2220 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transporters inner membrane component complement(1238182..1239219) Ralstonia pickettii 12D 8022280 YP_002984505.1 CDS Rpic12D_4593 NC_012857.1 1239255 1240262 R PFAM: NMT1/THI5 like domain protein; KEGG: rme:Rmet_2219 ABC-type nitrate/sulfonate/bicarbonate transporters periplasmic components; NMT1/THI5 like domain-containing protein complement(1239255..1240262) Ralstonia pickettii 12D 8022281 YP_002984506.1 CDS Rpic12D_4594 NC_012857.1 1240312 1241151 R PFAM: class II aldolase/adducin family protein; KEGG: bmj:BMULJ_04171 aldolase; hypothetical protein complement(1240312..1241151) Ralstonia pickettii 12D 8022282 YP_002984507.1 CDS Rpic12D_4595 NC_012857.1 1241161 1242252 R PFAM: Luciferase-like monooxygenase; KEGG: reu:Reut_B5047 alkanesulfonate monooxygenase; alkanesulfonate monooxygenase complement(1241161..1242252) Ralstonia pickettii 12D 8022283 YP_002984508.1 CDS Rpic12D_4596 NC_012857.1 1242450 1243658 D PFAM: acyl-CoA dehydrogenase type 2 domain; acyl-CoA dehydrogenase domain protein; KEGG: rme:Rmet_2217 acyl-CoA dehydrogenase; acyl-CoA dehydrogenase type 2 domain-containing protein 1242450..1243658 Ralstonia pickettii 12D 8022284 YP_002984509.1 CDS Rpic12D_4597 NC_012857.1 1243719 1244378 D KEGG: reu:Reut_B5045 cysteine dioxygenase type I; cysteine dioxygenase type I 1243719..1244378 Ralstonia pickettii 12D 8022285 YP_002984510.1 CDS Rpic12D_4598 NC_012857.1 1244375 1246024 D PFAM: rhodanese; SMART: Rhodanese domain protein; KEGG: cti:RALTA_B1561 thiosulfate sulfurtransferase rhodanese-like; rhodanese 1244375..1246024 Ralstonia pickettii 12D 8022286 YP_002984511.1 CDS Rpic12D_4599 NC_012857.1 1246396 1247283 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: rso:RS01886 hypothetical protein; hypothetical protein 1246396..1247283 Ralstonia pickettii 12D 8022287 YP_002984512.1 CDS Rpic12D_4600 NC_012857.1 1247299 1249311 R KEGG: rso:RS01894 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase complement(1247299..1249311) Ralstonia pickettii 12D 8022288 YP_002984513.1 CDS Rpic12D_4601 NC_012857.1 1249308 1249880 R KEGG: rso:RS01895 transmembrane protein; transmembrane protein complement(1249308..1249880) Ralstonia pickettii 12D 8022289 YP_002984514.1 CDS Rpic12D_4602 NC_012857.1 1249877 1251976 R PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rso:RS01896 TonB-dependent receptor signal peptide protein; TonB-dependent receptor complement(1249877..1251976) Ralstonia pickettii 12D 8022290 YP_002984515.1 CDS atpC NC_012857.1 1252151 1252570 R part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon complement(1252151..1252570) Ralstonia pickettii 12D 8022291 YP_002984516.1 CDS Rpic12D_4604 NC_012857.1 1252807 1253742 D TIGRFAM: aminoethylphosphonate catabolism associated LysR family transcriptional regulator; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cti:RALTA_B1068 transcriptional regulator, LysR family; LysR family transcriptional regulator 1252807..1253742 Ralstonia pickettii 12D 8022292 YP_002984517.1 CDS Rpic12D_4605 NC_012857.1 1253788 1254471 D TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase, subfamily IB (PSPase-like); KEGG: reh:H16_B1164 phosphoserine phosphatase; HAD-superfamily hydrolase 1253788..1254471 Ralstonia pickettii 12D 8022293 YP_002984518.1 CDS Rpic12D_4606 NC_012857.1 1254531 1255754 R TIGRFAM: FAD dependent oxidoreductase TIGR03364; PFAM: FAD dependent oxidoreductase; KEGG: pfl:PFL_5887 hypothetical protein; FAD dependent oxidoreductase complement(1254531..1255754) Ralstonia pickettii 12D 8022294 YP_002984519.1 CDS Rpic12D_4607 NC_012857.1 1255755 1256780 R TIGRFAM: 2-aminoethylphosphonate ABC transporter, 1-aminoethylphosphonate-binding protein component; PFAM: extracellular solute-binding protein family 1; KEGG: reu:Reut_B5525 extracellular solute-binding protein; 2-aminoethylphosphonate ABC transporter substrate-binding protein complement(1255755..1256780) Ralstonia pickettii 12D 8022295 YP_002984520.1 CDS Rpic12D_4608 NC_012857.1 1256836 1257714 R catalyzes the degradation of phosphonoacetaldehyde to acetaldehyde and phosphate; phosphonoacetaldehyde hydrolase complement(1256836..1257714) Ralstonia pickettii 12D 8022296 YP_002984521.1 CDS Rpic12D_4609 NC_012857.1 1257759 1259522 R TIGRFAM: 2-aminoethylphosphonate ABC transporter, permease; PFAM: binding-protein-dependent transporters inner membrane component; KEGG: reh:H16_B0110 ABC-type transporter duplicated permease domains; 2-aminoethylphosphonate ABC transporter permease complement(1257759..1259522) Ralstonia pickettii 12D 8022297 YP_002984522.1 CDS Rpic12D_4610 NC_012857.1 1259530 1260672 R KEGG: reh:H16_B0109 ABC-type transporter ATPase component; TIGRFAM: 2-aminoethylphosphonate ABC transporter, ATP-binding protein component; PFAM: ABC transporter; SMART: ATPase AAA; 2-aminoethylphosphonate ABC transporter ATP-binding protein complement(1259530..1260672) Ralstonia pickettii 12D 8022298 YP_002984523.1 CDS Rpic12D_4611 NC_012857.1 1260751 1261617 R TIGRFAM: aminoethylphosphonate catabolism associated LysR family transcriptional regulator; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: reu:Reut_B5518 LysR family transcriptional regulator; LysR family transcriptional regulator complement(1260751..1261617) Ralstonia pickettii 12D 8022299 YP_002984524.1 CDS Rpic12D_4612 NC_012857.1 1261941 1263644 D KEGG: rso:RS01899 hemagglutinin-related transmembrane protein; hemagglutinin-related transmembrane protein 1261941..1263644 Ralstonia pickettii 12D 8022300 YP_002984525.1 CDS Rpic12D_4613 NC_012857.1 1263799 1266384 R catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase complement(1263799..1266384) Ralstonia pickettii 12D 8022301 YP_002984526.1 CDS Rpic12D_4614 NC_012857.1 1266595 1266933 D PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rso:RS01900 ferredoxin protein; 4Fe-4S ferredoxin 1266595..1266933 Ralstonia pickettii 12D 8022302 YP_002984527.1 CDS Rpic12D_4615 NC_012857.1 1266963 1267784 D Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1266963..1267784 Ralstonia pickettii 12D 8022303 YP_002984528.1 CDS Rpic12D_4616 NC_012857.1 1267813 1268346 R PFAM: protein of unknown function DUF962; KEGG: rso:RS01901 hypothetical protein; hypothetical protein complement(1267813..1268346) Ralstonia pickettii 12D 8022304 YP_002984529.1 CDS Rpic12D_4617 NC_012857.1 1268494 1269225 D PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: rso:RS01902 transcription regulator protein; Crp/Fnr family transcriptional regulator 1268494..1269225 Ralstonia pickettii 12D 8022305 YP_002984530.1 CDS Rpic12D_4618 NC_012857.1 1269355 1271457 D EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 1269355..1271457 Ralstonia pickettii 12D 8022306 YP_002984531.1 CDS Rpic12D_4619 NC_012857.1 1271737 1272894 R PFAM: citrate transporter; KEGG: rso:RS01905 hypothetical protein; citrate transporter complement(1271737..1272894) Ralstonia pickettii 12D 8022307 YP_002984532.1 CDS Rpic12D_4620 NC_012857.1 1273036 1273569 R PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: rso:RS01906 hypothetical protein; XRE family transcriptional regulator complement(1273036..1273569) Ralstonia pickettii 12D 8022308 YP_002984533.1 CDS dnaE2 NC_012857.1 1274094 1277333 R DNA polymerase involved in damage-induced mutagenesis and translesion synthesis. It is not the major replicative DNA polymerase.; error-prone DNA polymerase complement(1274094..1277333) Ralstonia pickettii 12D 8022309 YP_002984534.1 CDS Rpic12D_4622 NC_012857.1 1277341 1278963 R KEGG: rso:RS01908 hypothetical protein; hypothetical protein complement(1277341..1278963) Ralstonia pickettii 12D 8022310 YP_002984535.1 CDS Rpic12D_4623 NC_012857.1 1279029 1279847 D KEGG: eugene3.168080001.; hypothetical protein 1279029..1279847 Ralstonia pickettii 12D 8022311 YP_002984536.1 CDS Rpic12D_4625 NC_012857.1 1286739 1287311 R KEGG: rso:RSc0705 hypothetical protein; hypothetical protein complement(1286739..1287311) Ralstonia pickettii 12D 8022319 YP_002984537.1 CDS Rpic12D_4626 NC_012857.1 1287617 1288822 D PFAM: fatty acid hydroxylase; KEGG: rso:RS01698 hypothetical protein; fatty acid hydroxylase 1287617..1288822 Ralstonia pickettii 12D 8022320 YP_002984538.1 CDS Rpic12D_4627 NC_012857.1 1288840 1289358 D PFAM: protein of unknown function DUF985; KEGG: rso:RS01699 hypothetical protein; hypothetical protein 1288840..1289358 Ralstonia pickettii 12D 8022321 YP_002984539.1 CDS Rpic12D_4628 NC_012857.1 1289359 1289481 R KEGG: rso:RS01700 hypothetical protein; hypothetical protein complement(1289359..1289481) Ralstonia pickettii 12D 8022322 YP_002984540.1 CDS Rpic12D_4629 NC_012857.1 1289784 1290662 D KEGG: bcm:Bcenmc03_1903 2-hydroxy-3-oxopropionate reductase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; NADP oxidoreductase coenzyme F420-dependent; 2-hydroxy-3-oxopropionate reductase 1289784..1290662 Ralstonia pickettii 12D 8022323 YP_002984541.1 CDS Rpic12D_4630 NC_012857.1 1290731 1292134 R PFAM: major facilitator superfamily MFS_1; general substrate transporter; KEGG: reu:Reut_B3580 hypothetical protein; major facilitator superfamily protein complement(1290731..1292134) Ralstonia pickettii 12D 8022324 YP_002984542.1 CDS Rpic12D_4631 NC_012857.1 1292206 1293306 R PFAM: porin Gram-negative type; KEGG: dac:Daci_4894 porin; porin complement(1292206..1293306) Ralstonia pickettii 12D 8022325 YP_002984543.1 CDS Rpic12D_4632 NC_012857.1 1293483 1294433 R PFAM: ferredoxin; oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: reu:Reut_B3579 ferredoxin:oxidoreductase FAD/NAD(P)-binding:oxidoreductase FAD-binding region; ferredoxin complement(1293483..1294433) Ralstonia pickettii 12D 8022326 YP_002984544.1 CDS Rpic12D_4633 NC_012857.1 1294455 1295417 R PFAM: glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: reh:H16_B0738 predicted ring-cleavage extradiol dioxygenase; glyoxalase/bleomycin resistance protein/dioxygenase complement(1294455..1295417) Ralstonia pickettii 12D 8022327 YP_002984545.1 CDS Rpic12D_4634 NC_012857.1 1295454 1296956 R PFAM: aldehyde dehydrogenase; KEGG: cti:RALTA_B0573 NAD+ dependent betaine aldehyde dehydrogenase; aldehyde dehydrogenase complement(1295454..1296956) Ralstonia pickettii 12D 8022328 YP_002984546.1 CDS Rpic12D_4635 NC_012857.1 1296973 1297776 R catalyzes the formation of L-aspartate to iminoaspartate in NAD(+) biosynthesis; L-aspartate dehydrogenase complement(1296973..1297776) Ralstonia pickettii 12D 8022329 YP_002984547.1 CDS Rpic12D_4636 NC_012857.1 1297809 1299548 R PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: reh:H16_B0735 acetolactate synthase large subunit; hypothetical protein complement(1297809..1299548) Ralstonia pickettii 12D 8022330 YP_002984548.1 CDS Rpic12D_4637 NC_012857.1 1299541 1300350 R PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cti:RALTA_B0570 short-chain dehydrogenase/reductase (SDR); short chain dehydrogenase complement(1299541..1300350) Ralstonia pickettii 12D 8022331 YP_002984549.1 CDS Rpic12D_4638 NC_012857.1 1300347 1301174 R PFAM: regulatory protein IclR; transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: reu:Reut_B3598 IclR family transcriptional regulator; IclR family transcriptional regulator complement(1300347..1301174) Ralstonia pickettii 12D 8022332 YP_002984550.1 CDS Rpic12D_4639 NC_012857.1 1301187 1302089 R PFAM: alpha/beta hydrolase fold; KEGG: reu:Reut_B3568 alpha/beta hydrolase fold; alpha/beta hydrolase complement(1301187..1302089) Ralstonia pickettii 12D 8022333 YP_002984551.1 CDS Rpic12D_4640 NC_012857.1 1302094 1302630 R PFAM: cupin; KEGG: cti:RALTA_B0568 conserved hypothetical protein, cupin domain, membrane protein; cupin complement(1302094..1302630) Ralstonia pickettii 12D 8022334 YP_002984552.1 CDS Rpic12D_4641 NC_012857.1 1302663 1303436 R member of a large family of NAD or NADP-dependent oxidoreductases; paralogs occur in many bacteria; short chain dehydrogenase complement(1302663..1303436) Ralstonia pickettii 12D 8022335 YP_002984553.1 CDS Rpic12D_4642 NC_012857.1 1303429 1304496 R PFAM: Rieske [2Fe-2S] domain protein; KEGG: reu:Reut_B3570 Rieske (2Fe-2S) region; Rieske (2Fe-2S) domain-containing protein complement(1303429..1304496) Ralstonia pickettii 12D 8022336 YP_002984554.1 CDS Rpic12D_4643 NC_012857.1 1304577 1304882 R KEGG: reh:H16_B0729 hypothetical protein; hypothetical protein complement(1304577..1304882) Ralstonia pickettii 12D 8022337 YP_002984555.1 CDS Rpic12D_4644 NC_012857.1 1305065 1305631 R PFAM: regulatory protein TetR; KEGG: reh:H16_B1099 transcriptional regulator, TetR/AcrR-family; TetR family transcriptional regulator complement(1305065..1305631) Ralstonia pickettii 12D 8022338 YP_002984556.1 CDS Rpic12D_4645 NC_012857.1 1305784 1306122 D PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bja:bll0256 transcriptional regulatory protein; AraC family transcriptional regulator 1305784..1306122 Ralstonia pickettii 12D 8022339 YP_002984557.1 CDS Rpic12D_4646 NC_012857.1 1306171 1306647 R PFAM: protein of unknown function DUF1348; KEGG: pfl:PFL_3262 hypothetical protein; hypothetical protein complement(1306171..1306647) Ralstonia pickettii 12D 8022340 YP_002984558.1 CDS Rpic12D_4647 NC_012857.1 1306791 1307258 R PFAM: GCN5-related N-acetyltransferase; KEGG: bpt:Bpet3229 acetyltransferase; N-acetyltransferase GCN5 complement(1306791..1307258) Ralstonia pickettii 12D 8022341 YP_002984559.1 CDS Rpic12D_4648 NC_012857.1 1307666 1307917 R KEGG: cvi:CV_0580 hypothetical protein; hypothetical protein complement(1307666..1307917) Ralstonia pickettii 12D 8022342 YP_002984560.1 CDS Rpic12D_4649 NC_012857.1 1308024 1308959 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cvi:CV_0581 LysR family transcriptional regulator; LysR family transcriptional regulator 1308024..1308959 Ralstonia pickettii 12D 8022343 YP_002984561.1 CDS Rpic12D_4650 NC_012857.1 1309069 1310097 D PFAM: alpha/beta hydrolase fold; KEGG: rme:Rmet_1384 alpha/beta hydrolase fold; alpha/beta hydrolase 1309069..1310097 Ralstonia pickettii 12D 8022344 YP_002984562.1 CDS Rpic12D_4651 NC_012857.1 1310238 1310462 D KEGG: rso:RS01733 hypothetical protein; hypothetical protein 1310238..1310462 Ralstonia pickettii 12D 8022345 YP_002984563.1 CDS Rpic12D_4652 NC_012857.1 1310490 1311062 R KEGG: rso:RS01734 transmembrane protein; transmembrane protein complement(1310490..1311062) Ralstonia pickettii 12D 8022346 YP_002984564.1 CDS Rpic12D_4653 NC_012857.1 1311128 1312000 R PFAM: aminotransferase class IV; KEGG: rso:RS01735 D-alanine aminotransferase (D-aspartate aminotransferase) protein; class IV aminotransferase complement(1311128..1312000) Ralstonia pickettii 12D 8022347 YP_002984565.1 CDS Rpic12D_4654 NC_012857.1 1312161 1312673 D PFAM: GCN5-related N-acetyltransferase; KEGG: rso:RS01736 hypothetical protein; N-acetyltransferase GCN5 1312161..1312673 Ralstonia pickettii 12D 8022348 YP_002984566.1 CDS Rpic12D_4655 NC_012857.1 1312769 1313086 D KEGG: rso:RS01741 signal peptide protein; signal peptide protein 1312769..1313086 Ralstonia pickettii 12D 8022349 YP_002984567.1 CDS Rpic12D_4656 NC_012857.1 1313090 1313833 R PFAM: ABC transporter; SMART: ATPase AAA; KEGG: rso:RS01742 amino-acid composite ATP-binding transmembrane ABC transporter protein; ABC transporter complement(1313090..1313833) Ralstonia pickettii 12D 8022350 YP_002984568.1 CDS Rpic12D_4657 NC_012857.1 1313845 1315671 R PFAM: ABC transporter; inner-membrane translocator; SMART: ATPase AAA; KEGG: rso:RS01743 amino-acid composite ATP-binding transmembrane ABC transporter protein; ABC transporter complement(1313845..1315671) Ralstonia pickettii 12D 8022351 YP_002984569.1 CDS Rpic12D_4658 NC_012857.1 1315676 1316728 R PFAM: inner-membrane translocator; KEGG: rso:RS01744 amino-acid transmembrane ABC transporter protein; inner-membrane translocator complement(1315676..1316728) Ralstonia pickettii 12D 8022352 YP_002984570.1 CDS Rpic12D_4659 NC_012857.1 1316843 1317730 R PFAM: regulatory protein IclR; SMART: regulatory protein IclR; KEGG: rso:RS01745 transcription regulator protein; IclR family transcriptional regulator complement(1316843..1317730) Ralstonia pickettii 12D 8022353 YP_002984571.1 CDS Rpic12D_4660 NC_012857.1 1317997 1318956 D PFAM: beta-lactamase; KEGG: rso:RS01746 hypothetical protein; beta-lactamase 1317997..1318956 Ralstonia pickettii 12D 8022354 YP_002984572.1 CDS Rpic12D_4661 NC_012857.1 1319013 1320692 D PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: rso:RS01747 hypothetical protein; FAD-dependent oxidoreductase 1319013..1320692 Ralstonia pickettii 12D 8022355 YP_002984573.1 CDS Rpic12D_4662 NC_012857.1 1320698 1320904 D KEGG: rso:RS01748 hypothetical protein; hypothetical protein 1320698..1320904 Ralstonia pickettii 12D 8022356 YP_002984574.1 CDS Rpic12D_4663 NC_012857.1 1320945 1321994 R PFAM: aldo/keto reductase; KEGG: bpy:Bphyt_5452 aldo/keto reductase; aldo/keto reductase complement(1320945..1321994) Ralstonia pickettii 12D 8022357 YP_002984575.1 CDS Rpic12D_4664 NC_012857.1 1322194 1323111 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: rso:RS01757 transcription regulator transcription regulator protein; LysR family transcriptional regulator complement(1322194..1323111) Ralstonia pickettii 12D 8022358 YP_002984576.1 CDS Rpic12D_4665 NC_012857.1 1323136 1323246 R hypothetical protein complement(1323136..1323246) Ralstonia pickettii 12D 8022359 Rpic12D_R0001 tRNA Rpic12D_R0001 NC_012856.1 287715 287791 R tRNA-Gln complement(287715..287791) Ralstonia pickettii 12D 8017901 Rpic12D_R0003 tRNA Rpic12D_R0003 NC_012856.1 471816 471892 R tRNA-Met complement(471816..471892) Ralstonia pickettii 12D 8018072 Rpic12D_R0004 tRNA Rpic12D_R0004 NC_012856.1 729107 729180 R tRNA-Gly complement(729107..729180) Ralstonia pickettii 12D 8018324 Rpic12D_R0005 tRNA Rpic12D_R0005 NC_012856.1 764870 764946 D tRNA-Lys 764870..764946 Ralstonia pickettii 12D 8018360 Rpic12D_R0006 tRNA Rpic12D_R0006 NC_012856.1 785464 785536 D tRNA-Lys 785464..785536 Ralstonia pickettii 12D 8018383 Rpic12D_R0007 tRNA Rpic12D_R0007 NC_012856.1 829205 829280 R tRNA-Cys complement(829205..829280) Ralstonia pickettii 12D 8018429 Rpic12D_R0009 tRNA Rpic12D_R0009 NC_012856.1 935733 935807 R tRNA-Arg complement(935733..935807) Ralstonia pickettii 12D 8018527 Rpic12D_R0010 tRNA Rpic12D_R0010 NC_012856.1 1053565 1053640 D tRNA-Gly 1053565..1053640 Ralstonia pickettii 12D 8018635 Rpic12D_R0011 tRNA Rpic12D_R0011 NC_012856.1 1053695 1053770 D tRNA-Gly 1053695..1053770 Ralstonia pickettii 12D 8018636 Rpic12D_R0012 tRNA Rpic12D_R0012 NC_012856.1 1053863 1053936 D tRNA-Cys 1053863..1053936 Ralstonia pickettii 12D 8018637 Rpic12D_R0013 tRNA Rpic12D_R0013 NC_012856.1 1103119 1103194 R tRNA-Lys complement(1103119..1103194) Ralstonia pickettii 12D 8018685 Rpic12D_R0014 tRNA Rpic12D_R0014 NC_012856.1 1106278 1106368 R tRNA-Leu complement(1106278..1106368) Ralstonia pickettii 12D 8018689 Rpic12D_R0015 tRNA Rpic12D_R0015 NC_012856.1 1106448 1106523 R tRNA-Asn complement(1106448..1106523) Ralstonia pickettii 12D 8018690 Rpic12D_R0016 tRNA Rpic12D_R0016 NC_012856.1 1163555 1163648 D tRNA-Ser 1163555..1163648 Ralstonia pickettii 12D 8018745 Rpic12D_R0017 tRNA Rpic12D_R0017 NC_012856.1 1174340 1174415 D tRNA-Ala 1174340..1174415 Ralstonia pickettii 12D 8018754 Rpic12D_R0018 tRNA Rpic12D_R0018 NC_012856.1 1174535 1174610 D tRNA-Glu 1174535..1174610 Ralstonia pickettii 12D 8018755 Rpic12D_R0019 tRNA Rpic12D_R0019 NC_012856.1 1174674 1174750 D tRNA-Asp 1174674..1174750 Ralstonia pickettii 12D 8018756 Rpic12D_R0021 tRNA Rpic12D_R0021 NC_012856.1 1230664 1230748 R tRNA-Leu complement(1230664..1230748) Ralstonia pickettii 12D 8018807 Rpic12D_R0022 tRNA Rpic12D_R0022 NC_012856.1 1310347 1310422 R tRNA-His complement(1310347..1310422) Ralstonia pickettii 12D 8018880 Rpic12D_R0023 tRNA Rpic12D_R0023 NC_012856.1 1624325 1624401 R tRNA-Asp complement(1624325..1624401) Ralstonia pickettii 12D 8019178 Rpic12D_R0024 tRNA Rpic12D_R0024 NC_012856.1 1624446 1624521 R tRNA-Val complement(1624446..1624521) Ralstonia pickettii 12D 8019179 Rpic12D_R0025 tRNA Rpic12D_R0025 NC_012856.1 1656030 1656116 R tRNA-Leu complement(1656030..1656116) Ralstonia pickettii 12D 8019210 Rpic12D_R0026 tRNA Rpic12D_R0026 NC_012856.1 1701350 1701426 D tRNA-Met 1701350..1701426 Ralstonia pickettii 12D 8019249 Rpic12D_R0027 tRNA Rpic12D_R0027 NC_012856.1 1701455 1701531 D tRNA-Met 1701455..1701531 Ralstonia pickettii 12D 8019250 Rpic12D_R0028 tRNA Rpic12D_R0028 NC_012856.1 1743082 1743158 D tRNA-Pro 1743082..1743158 Ralstonia pickettii 12D 8019290 Rpic12D_R0029 tRNA Rpic12D_R0029 NC_012856.1 1751507 1751583 R tRNA-Val complement(1751507..1751583) Ralstonia pickettii 12D 8019299 Rpic12D_R0030 tRNA Rpic12D_R0030 NC_012856.1 1772477 1772553 D tRNA-Arg 1772477..1772553 Ralstonia pickettii 12D 8019322 Rpic12D_R0031 tRNA Rpic12D_R0031 NC_012856.1 1815607 1815683 D tRNA-Pro 1815607..1815683 Ralstonia pickettii 12D 8019361 Rpic12D_R0032 tRNA Rpic12D_R0032 NC_012856.1 1866344 1866418 R tRNA-Val complement(1866344..1866418) Ralstonia pickettii 12D 8019405 Rpic12D_R0033 tRNA Rpic12D_R0033 NC_012856.1 1886037 1886127 R tRNA-Ser complement(1886037..1886127) Ralstonia pickettii 12D 8019424 Rpic12D_R0034 tRNA Rpic12D_R0034 NC_012856.1 2008843 2008927 R tRNA-Leu complement(2008843..2008927) Ralstonia pickettii 12D 8019548 Rpic12D_R0035 tRNA Rpic12D_R0035 NC_012856.1 2071193 2071268 D tRNA-Thr 2071193..2071268 Ralstonia pickettii 12D 8019601 Rpic12D_R0036 tRNA Rpic12D_R0036 NC_012856.1 2076694 2076770 D tRNA-Arg 2076694..2076770 Ralstonia pickettii 12D 8019609 Rpic12D_R0037 tRNA Rpic12D_R0037 NC_012856.1 2087879 2087968 D tRNA-Ser 2087879..2087968 Ralstonia pickettii 12D 8019622 Rpic12D_R0038 tRNA Rpic12D_R0038 NC_012856.1 2156057 2156144 R tRNA-Met complement(2156057..2156144) Ralstonia pickettii 12D 8019687 Rpic12D_R0039 tRNA Rpic12D_R0039 NC_012856.1 2280506 2280595 R tRNA-Ser complement(2280506..2280595) Ralstonia pickettii 12D 8019806 Rpic12D_R0041 tRNA Rpic12D_R0041 NC_012856.1 2379490 2379574 D tRNA-Leu 2379490..2379574 Ralstonia pickettii 12D 8019897 Rpic12D_R0042 tRNA Rpic12D_R0042 NC_012856.1 2802500 2802576 D tRNA-Pro 2802500..2802576 Ralstonia pickettii 12D 8020323 Rpic12D_R0046 tRNA Rpic12D_R0046 NC_012856.1 2911686 2911761 R tRNA-Ala complement(2911686..2911761) Ralstonia pickettii 12D 8020417 Rpic12D_R0047 tRNA Rpic12D_R0047 NC_012856.1 2911798 2911874 R tRNA-Ile complement(2911798..2911874) Ralstonia pickettii 12D 8020418 Rpic12D_R0049 tRNA Rpic12D_R0049 NC_012856.1 3012592 3012667 R tRNA-Thr complement(3012592..3012667) Ralstonia pickettii 12D 8020526 Rpic12D_R0050 tRNA Rpic12D_R0050 NC_012856.1 3130410 3130485 R tRNA-Trp complement(3130410..3130485) Ralstonia pickettii 12D 8020646 Rpic12D_R0051 tRNA Rpic12D_R0051 NC_012856.1 3131808 3131882 R tRNA-Thr complement(3131808..3131882) Ralstonia pickettii 12D 8020648 Rpic12D_R0052 tRNA Rpic12D_R0052 NC_012856.1 3131902 3131975 R tRNA-Gly complement(3131902..3131975) Ralstonia pickettii 12D 8020649 Rpic12D_R0053 tRNA Rpic12D_R0053 NC_012856.1 3132032 3132117 R tRNA-Tyr complement(3132032..3132117) Ralstonia pickettii 12D 8020650 Rpic12D_R0057 tRNA Rpic12D_R0057 NC_012856.1 3138384 3138459 R tRNA-Ala complement(3138384..3138459) Ralstonia pickettii 12D 8020657 Rpic12D_R0058 tRNA Rpic12D_R0058 NC_012856.1 3138496 3138572 R tRNA-Ile complement(3138496..3138572) Ralstonia pickettii 12D 8020658 Rpic12D_R0060 tRNA Rpic12D_R0060 NC_012856.1 3190306 3190381 D tRNA-Arg 3190306..3190381 Ralstonia pickettii 12D 8020703 Rpic12D_R0061 tRNA Rpic12D_R0061 NC_012856.1 3294504 3294579 R tRNA-Ala complement(3294504..3294579) Ralstonia pickettii 12D 8020806 Rpic12D_R0062 tRNA Rpic12D_R0062 NC_012856.1 3531005 3531080 R tRNA-Phe complement(3531005..3531080) Ralstonia pickettii 12D 8021032 Rpic12D_R0063 tRNA Rpic12D_R0063 NC_012857.1 47276 47352 D tRNA-OTHER 47276..47352 Ralstonia pickettii 12D 8021188 Rpic12D_R0064 tRNA Rpic12D_R0064 NC_012857.1 509572 509656 R tRNA-Leu complement(509572..509656) Ralstonia pickettii 12D 8021617 Rpic12D_R0068 tRNA Rpic12D_R0068 NC_012857.1 1283492 1283567 R tRNA-Ala complement(1283492..1283567) Ralstonia pickettii 12D 8022315 Rpic12D_R0069 tRNA Rpic12D_R0069 NC_012857.1 1283604 1283680 R tRNA-Ile complement(1283604..1283680) Ralstonia pickettii 12D 8022316 Rpic12D_R0043 rRNA Rpic12D_R0043 NC_012856.1 2908310 2908421 R 5S ribosomal RNA complement(2908310..2908421) Ralstonia pickettii 12D 8020414 Rpic12D_R0044 rRNA Rpic12D_R0044 NC_012856.1 2908311 2908423 R 5S ribosomal RNA complement(2908311..2908423) Ralstonia pickettii 12D 8020415 Rpic12D_R0045 rRNA Rpic12D_R0045 NC_012856.1 2908541 2911417 R 23S ribosomal RNA complement(2908541..2911417) Ralstonia pickettii 12D 8020416 Rpic12D_R0048 rRNA Rpic12D_R0048 NC_012856.1 2911940 2913465 R 16S ribosomal RNA complement(2911940..2913465) Ralstonia pickettii 12D 8020419 Rpic12D_R0054 rRNA Rpic12D_R0054 NC_012856.1 3135008 3135119 R 5S ribosomal RNA complement(3135008..3135119) Ralstonia pickettii 12D 8020654 Rpic12D_R0055 rRNA Rpic12D_R0055 NC_012856.1 3135009 3135121 R 5S ribosomal RNA complement(3135009..3135121) Ralstonia pickettii 12D 8020655 Rpic12D_R0056 rRNA Rpic12D_R0056 NC_012856.1 3135239 3138115 R 23S ribosomal RNA complement(3135239..3138115) Ralstonia pickettii 12D 8020656 Rpic12D_R0059 rRNA Rpic12D_R0059 NC_012856.1 3138638 3140163 R 16S ribosomal RNA complement(3138638..3140163) Ralstonia pickettii 12D 8020659 Rpic12D_R0065 rRNA Rpic12D_R0065 NC_012857.1 1280117 1280228 R 5S ribosomal RNA complement(1280117..1280228) Ralstonia pickettii 12D 8022312 Rpic12D_R0066 rRNA Rpic12D_R0066 NC_012857.1 1280118 1280230 R 5S ribosomal RNA complement(1280118..1280230) Ralstonia pickettii 12D 8022313 Rpic12D_R0067 rRNA Rpic12D_R0067 NC_012857.1 1280348 1283224 R 23S ribosomal RNA complement(1280348..1283224) Ralstonia pickettii 12D 8022314 Rpic12D_R0070 rRNA Rpic12D_R0070 NC_012857.1 1283746 1285271 R 16S ribosomal RNA complement(1283746..1285271) Ralstonia pickettii 12D 8022317