-- dump date   	20140620_015946
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_007238244.1	PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; manually curated
YP_007238245.1	PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA
YP_007238246.1	PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit
YP_007238247.1	PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein
YP_007238248.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit
YP_007238249.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: alkyl hydroperoxide reductase, F subunit
YP_007238250.1	PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_007238251.1	PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases
YP_007238252.1	PFAM: Polynucleotide kinase 3 phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; histidinol-phosphate phosphatase family domain
YP_007238253.1	PFAM: Glycyl-tRNA synthetase beta subunit; DALR anticodon binding domain; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, beta subunit
YP_007238254.1	PFAM: Glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, alpha subunit
YP_007238255.1	PFAM: Methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I
YP_007238256.1	PFAM: Bacterial lipid A biosynthesis acyltransferase
YP_007238257.1	PFAM: PilZ domain
YP_007238258.1	PFAM: Tetratricopeptide repeat
YP_007238259.1	PFAM: ABC transporter; TIGRFAM: ectoine/hydroxyectoine ABC transporter, ATP-binding protein
YP_007238260.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; ectoine/hydroxyectoine ABC transporter, permease protein EhuD
YP_007238261.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; ectoine/hydroxyectoine ABC transporter, permease protein EhuC
YP_007238262.1	PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: ectoine/hydroxyectoine ABC transporter solute-binding protein
YP_007238263.1	PFAM: TrkA-N domain; TrkA-C domain
YP_007238264.1	PFAM: NOL1/NOP2/sun family; NusB family; TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB
YP_007238265.1	PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase
YP_007238266.1	PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase
YP_007238267.1	PFAM: LysM domain
YP_007238268.1	PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA
YP_007238269.1	PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein
YP_007238270.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_007238271.1	PFAM: Coproporphyrinogen III oxidase
YP_007238272.1	PFAM: Shikimate dehydrogenase substrate binding domain; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase
YP_007238274.1	PFAM: Bacterial protein of unknown function (DUF883)
YP_007238275.1	PFAM: D-alanyl-D-alanine carboxypeptidase
YP_007238276.1	PFAM: Protein of unknown function (DUF2946)
YP_007238277.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain
YP_007238279.1	PFAM: Predicted membrane protein (DUF2319)
YP_007238280.1	TIGRFAM: trehalose synthase, Pseudomonas stutzeri type
YP_007238282.1	PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific
YP_007238283.1	PFAM: Protein of unknown function (DUF2934)
YP_007238284.1	PFAM: Bacterial protein of unknown function (DUF945)
YP_007238285.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_007238286.1	PFAM: Protein of unknown function (DUF421)
YP_007238287.1	PFAM: Nuclease-related domain
YP_007238289.1	PFAM: Domain of unknown function (DUF1993)
YP_007238290.1	PFAM: Patatin-like phospholipase
YP_007238291.1	PFAM: ABC transporter transmembrane region; ABC transporter
YP_007238292.1	PFAM: Activator of Hsp90 ATPase homolog 1-like protein
YP_007238293.1	PFAM: Acetyltransferase (GNAT) family
YP_007238299.1	PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain
YP_007238300.1	PFAM: Helix-turn-helix
YP_007238301.1	PFAM: HipA-like C-terminal domain; HipA-like N-terminal domain
YP_007238303.1	PFAM: Protein of unknown function (DUF1289)
YP_007238305.1	PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit
YP_007238306.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit
YP_007238307.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_007238308.1	PFAM: Subtilase family
YP_007238309.1	PFAM: Protein of unknown function (DUF3060)
YP_007238310.1	PFAM: DJ-1/PfpI family; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_007238311.1	PFAM: Isochorismatase family
YP_007238312.1	PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase
YP_007238313.1	PFAM: Glycosyl transferases group 1
YP_007238314.1	PFAM: UDP-galactopyranose mutase; TIGRFAM: UDP-galactopyranose mutase
YP_007238316.1	PFAM: ABC transporter transmembrane region; ABC transporter
YP_007238318.1	PFAM: Protein of unknown function (DUF1458)
YP_007238319.1	PFAM: Sodium/hydrogen exchanger family
YP_007238320.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: luciferase family oxidoreductase, group 1
YP_007238323.1	PFAM: Predicted aminopeptidase (DUF2265)
YP_007238325.1	PFAM: Domain of unknown function (DUF892)
YP_007238326.1	PFAM: Domain of unknown function (DUF1850)
YP_007238327.1	PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein
YP_007238328.1	PFAM: NMT1/THI5 like; TIGRFAM: TRAP transporter solute receptor, TAXI family
YP_007238331.1	PFAM: Metallo-beta-lactamase superfamily; TIGRFAM: phosphonate metabolism protein PhnP
YP_007238332.1	PFAM: Guanylate kinase; TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN
YP_007238333.1	TIGRFAM: phosphonate metabolism protein PhnM
YP_007238334.1	PFAM: ABC transporter; TIGRFAM: phosphonate C-P lyase system protein PhnL
YP_007238335.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: phosphonate C-P lyase system protein PhnK
YP_007238336.1	PFAM: Phosphonate metabolism protein PhnJ
YP_007238337.1	PFAM: Bacterial phosphonate metabolism protein (PhnI)
YP_007238338.1	PFAM: Bacterial phosphonate metabolism protein (PhnH); TIGRFAM: phosphonate C-P lyase system protein PhnH
YP_007238339.1	PFAM: Phosphonate metabolism protein PhnG; TIGRFAM: phosphonate C-P lyase system protein PhnG
YP_007238340.1	PFAM: Bacterial regulatory proteins, gntR family; UTRA domain; TIGRFAM: phosphonates metabolism transcriptional regulator PhnF
YP_007238341.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphonate ABC transporter, permease protein PhnE
YP_007238342.1	TIGRFAM: phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein; phosphonate ABC transporter, periplasmic phosphonate binding protein
YP_007238343.1	PFAM: ABC transporter; TIGRFAM: phosphonate ABC transporter, ATP-binding protein
YP_007238344.1	PFAM: short chain dehydrogenase
YP_007238345.1	TIGRFAM: malonate decarboxylase, alpha subunit
YP_007238346.1	PFAM: ATP:dephospho-CoA triphosphoribosyl transferase; TIGRFAM: triphosphoribosyl-dephospho-CoA synthase MdcB
YP_007238347.1	PFAM: Malonate decarboxylase delta subunit (MdcD); TIGRFAM: malonate decarboxylase acyl carrier protein
YP_007238348.1	PFAM: Carboxyl transferase domain; TIGRFAM: malonate decarboxylase, beta subunit
YP_007238349.1	PFAM: Malonate decarboxylase gamma subunit (MdcE); TIGRFAM: malonate decarboxylase, gamma subunit
YP_007238350.1	PFAM: Phosphoribosyl-dephospho-CoA transferase MdcG; TIGRFAM: malonate decarboxylase holo-[acyl-carrier-protein] synthase
YP_007238351.1	PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; malonate decarboxylase, epsilon subunit
YP_007238352.1	PFAM: Malonate transporter MadL subunit; TIGRFAM: malonate transporter, MadL subunit
YP_007238353.1	PFAM: Malonate/sodium symporter MadM subunit; TIGRFAM: malonate transporter, MadM subunit
YP_007238354.1	PFAM: FAD dependent oxidoreductase
YP_007238355.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_007238356.1	PFAM: Protein of unknown function (DUF1109)
YP_007238357.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_007238358.1	PFAM: Predicted integral membrane protein (DUF2282)
YP_007238359.1	PFAM: Protein of unknown function (DUF692)
YP_007238360.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2063)
YP_007238361.1	PFAM: DoxX
YP_007238364.1	PFAM: LysM domain
YP_007238366.1	PFAM: Phage-related baseplate assembly protein; Phage late control gene D protein (GPD); TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein
YP_007238367.1	PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain
YP_007238368.1	PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: type VI secretion ATPase, ClpV1 family
YP_007238369.1	PFAM: Protein of unknown function (DUF1305); TIGRFAM: type VI secretion protein, VC_A0111 family
YP_007238370.1	PFAM: Bacterial protein of unknown function (DUF879); TIGRFAM: type VI secretion protein, VC_A0110 family
YP_007238372.1	PFAM: Protein of unknown function (DUF2931)
YP_007238373.1	PFAM: PAAR motif; Uncharacterized conserved protein (DUF2235)
YP_007238374.1	PFAM: Gene 25-like lysozyme; TIGRFAM: type VI secretion system lysozyme-related protein
YP_007238375.1	PFAM: Protein of unknown function (DUF877); TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family
YP_007238376.1	PFAM: Protein of unknown function (DUF770); TIGRFAM: type VI secretion protein, VC_A0107 family
YP_007238377.1	PFAM: ImpA-related N-terminal; TIGRFAM: type VI secretion-associated protein, VC_A0119 family
YP_007238378.1	PFAM: Aldose 1-epimerase
YP_007238379.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_007238380.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_007238381.1	PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: lysine-arginine-ornithine-binding periplasmic protein
YP_007238382.1	PFAM: ABC transporter
YP_007238383.1	PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport
YP_007238384.1	PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_007238385.1	PFAM: Staphylococcal nuclease homologue
YP_007238386.1	PFAM: Bacterial Fe(2+) trafficking
YP_007238387.1	PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: A/G-specific adenine glycosylase
YP_007238388.1	PFAM: AsmA family
YP_007238389.1	PFAM: Acetyltransferase, GNAT family
YP_007238390.1	PFAM: ABC transporter; TIGRFAM: nitrate transport ATP-binding subunits C and D
YP_007238391.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: nitrate ABC transporter, permease protein
YP_007238393.1	PFAM: Nitrate and nitrite sensing; ANTAR domain
YP_007238394.1	PFAM: Imidazoleglycerol-phosphate dehydratase
YP_007238395.1	PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
YP_007238396.1	PFAM: Uncharacterized conserved protein (DUF2164)
YP_007238397.1	PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
YP_007238398.1	PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit
YP_007238399.1	PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_007238400.1	PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_007238401.1	PFAM: Divergent polysaccharide deacetylase
YP_007238402.1	PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc)
YP_007238403.1	PFAM: Peptidase family M23
YP_007238404.1	PFAM: Metalloenzyme superfamily; BPG-independent PGAM N-terminus (iPGM_N); TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
YP_007238405.1	PFAM: Rhodanese-like domain
YP_007238406.1	PFAM: Glutaredoxin; TIGRFAM: Glutaredoxin, GrxC family
YP_007238407.1	PFAM: Preprotein translocase subunit SecB; TIGRFAM: protein-export chaperone SecB
YP_007238408.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_007238409.1	PFAM: Flagellar basal body-associated protein FliL
YP_007238410.1	PFAM: Protein of unknown function DUF55
YP_007238412.1	PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase
YP_007238413.1	PFAM: Cell division protein ZapA
YP_007238414.1	TIGRFAM: TIGR02449 family protein
YP_007238415.1	PFAM: Uncharacterised protein family (UPF0149)
YP_007238416.1	PFAM: Aminopeptidase P, N-terminal domain; Metallopeptidase family M24
YP_007238417.1	PFAM: FAD binding domain; FAD dependent oxidoreductase; TIGRFAM: 2-polyprenyl-6-methoxyphenol 4-hydroxylase; Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; 2-octaprenyl-6-methoxyphenol hydroxylase
YP_007238419.1	PFAM: FAD binding domain; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family
YP_007238420.1	PFAM: Bacterial extracellular solute-binding protein
YP_007238421.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_007238422.1	PFAM: Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; TIGRFAM: glycine cleavage system T protein
YP_007238423.1	PFAM: Glycine cleavage H-protein; TIGRFAM: glycine cleavage system H protein
YP_007238424.1	PFAM: Glycine cleavage system P-protein; TIGRFAM: glycine dehydrogenase (decarboxylating)
YP_007238425.1	PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC/EngB
YP_007238426.1	PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III
YP_007238427.1	PFAM: DSBA-like thioredoxin domain
YP_007238428.1	PFAM: Endonuclease/Exonuclease/phosphatase family
YP_007238429.1	PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_007238430.1	PFAM: Putative peptidoglycan binding domain; N-acetylmuramoyl-L-alanine amidase
YP_007238431.1	PFAM: Protein of unknown function (DUF1330)
YP_007238432.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_007238433.1	PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain
YP_007238434.1	PFAM: Domain of unknown function (DUF2383); TIGRFAM: conserved hypothetical protein
YP_007238436.1	PFAM: Protein of unknown function (DUF1328)
YP_007238437.1	PFAM: Nucleoside recognition
YP_007238438.1	PFAM: Domain of unknown function (DUF3394); DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein
YP_007238439.1	PFAM: NMT1/THI5 like; TIGRFAM: TRAP transporter solute receptor, TAXI family
YP_007238440.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; PAS fold; TIGRFAM: PAS domain S-box
YP_007238442.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; PAS fold; TIGRFAM: PAS domain S-box
YP_007238443.1	PFAM: 7TM diverse intracellular signalling; GGDEF domain; 7TMR-DISM extracellular 2; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_007238444.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Two-component sensor kinase N-terminal
YP_007238445.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_007238446.1	PFAM: outer membrane porin, OprD family
YP_007238447.1	PFAM: Tripartite tricarboxylate transporter family receptor
YP_007238449.1	PFAM: Tripartite tricarboxylate transporter TctA family
YP_007238450.1	PFAM: Putative ammonia monooxygenase; TIGRFAM: membrane protein AbrB duplication
YP_007238451.1	PFAM: PhoU domain; Na+/Pi-cotransporter; TIGRFAM: Na/Pi-cotransporter; Phosphate:Na+ Symporter (PNaS) Family
YP_007238453.1	PFAM: Exodeoxyribonuclease V, gamma subunit; TIGRFAM: exodeoxyribonuclease V, gamma subunit
YP_007238454.1	PFAM: UvrD/REP helicase; TIGRFAM: exodeoxyribonuclease V, beta subunit
YP_007238455.1	PFAM: Putative ATPase (DUF699); TIGRFAM: exodeoxyribonuclease V, alpha subunit
YP_007238457.1	PFAM: Membrane transport protein
YP_007238458.1	PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_007238459.1	PFAM: Thioesterase superfamily
YP_007238460.1	TIGRFAM: phosphate binding protein
YP_007238461.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_007238462.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA
YP_007238463.1	PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein
YP_007238464.1	PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU
YP_007238465.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_007238466.1	PFAM: EamA-like transporter family
YP_007238467.1	PFAM: GTPase of unknown function; Domain of unknown function (DUF3482); TIGRFAM: small GTP-binding protein domain
YP_007238468.1	PFAM: Protein of unknown function (DUF2868)
YP_007238469.1	PFAM: Glycerophosphoryl diester phosphodiesterase family
YP_007238470.1	PFAM: Dihydrofolate reductase
YP_007238471.1	PFAM: Uncharacterized BCR, YitT family COG1284
YP_007238472.1	TIGRFAM: phosphoesterase, MJ0936 family
YP_007238473.1	PFAM: FAD dependent oxidoreductase
YP_007238475.1	PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase
YP_007238476.1	PFAM: isoform II
YP_007238477.1	PFAM: S-adenosylmethionine-dependent methyltransferase
YP_007238478.1	PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease, PfpI family
YP_007238479.1	PFAM: HDOD domain
YP_007238480.1	PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg)
YP_007238482.1	PFAM: Na+/Pi-cotransporter; TIGRFAM: Na/Pi-cotransporter
YP_007238483.1	PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase
YP_007238485.1	PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain
YP_007238486.1	PFAM: GMC oxidoreductase
YP_007238488.1	PFAM: Aldehyde dehydrogenase family
YP_007238489.1	PFAM: Bacterial regulatory proteins, tetR family
YP_007238490.1	PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase
YP_007238491.1	PFAM: GSPII_E N-terminal domain
YP_007238494.1	PFAM: alpha/beta hydrolase fold
YP_007238496.1	PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family
YP_007238497.1	PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16)
YP_007238498.1	PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16)
YP_007238499.1	PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY
YP_007238500.1	PFAM: ABC transporter; TIGRFAM: cell division ATP-binding protein FtsE; Type II (General) Secretory Pathway (IISP) Family protein
YP_007238501.1	PFAM: Predicted permease
YP_007238502.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; alternative sigma factor RpoH
YP_007238503.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; CHASE domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_007238504.1	PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain
YP_007238505.1	PFAM: Transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase
YP_007238506.1	PFAM: Protein of unknown function (DUF423)
YP_007238507.1	PFAM: ThiS family; TIGRFAM: thiamine biosynthesis protein ThiS
YP_007238508.1	PFAM: Thiazole biosynthesis protein ThiG
YP_007238509.1	PFAM: Putative methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase
YP_007238510.1	PFAM: Protein of unknown function (DUF1329)
YP_007238511.1	PFAM: Amino acid kinase family; TIGRFAM: carbamate kinase
YP_007238512.1	PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase
YP_007238513.1	PFAM: Amidinotransferase; TIGRFAM: arginine deiminase
YP_007238514.1	PFAM: Amino acid permease; TIGRFAM: arginine/ornithine antiporter; transporter, basic amino acid/polyamine antiporter (APA) family; TC 2.A.3.2.3
YP_007238516.1	PFAM: Protein of unknown function (DUF3392)
YP_007238517.1	PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase
YP_007238518.1	PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family
YP_007238520.1	PFAM: Methionine biosynthesis protein MetW; TIGRFAM: methionine biosynthesis protein MetW
YP_007238521.1	PFAM: alpha/beta hydrolase fold; TIGRFAM: homoserine O-acetyltransferase
YP_007238522.1	PFAM: Dynamin family
YP_007238523.1	PFAM: YGGT family
YP_007238524.1	PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase
YP_007238525.1	PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family
YP_007238526.1	PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT
YP_007238527.1	PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT
YP_007238528.1	TIGRFAM: probable DNA metabolism protein
YP_007238529.1	TIGRFAM: putative DNA modification/repair radical SAM protein
YP_007238530.1	PFAM: TM2 domain
YP_007238531.1	PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type
YP_007238532.1	PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase
YP_007238533.1	PFAM: Phosphoribosyl transferase domain
YP_007238534.1	PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: RNAse H-fold protein YqgF
YP_007238535.1	PFAM: Uncharacterized ACR, COG1678
YP_007238536.1	PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain
YP_007238537.1	PFAM: Prokaryotic glutathione synthetase, N-terminal domain; Prokaryotic glutathione synthetase, ATP-grasp domain; TIGRFAM: glutathione synthetase, prokaryotic
YP_007238538.1	PFAM: Response regulator receiver domain
YP_007238539.1	PFAM: Response regulator receiver domain
YP_007238540.1	PFAM: CheW-like domain
YP_007238541.1	PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_007238542.1	PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain
YP_007238543.1	PFAM: CheW-like domain; Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain
YP_007238544.1	PFAM: CheB methylesterase
YP_007238545.1	PFAM: CheW-like domain
YP_007238546.1	PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family
YP_007238547.1	PFAM: Aminotransferase class-III; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate transaminase
YP_007238548.1	PFAM: Cytochrome b(N-terminal)/b6/petB
YP_007238549.1	PFAM: YceI-like domain
YP_007238550.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_007238551.1	PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
YP_007238552.1	PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family
YP_007238553.1	PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase
YP_007238554.1	PFAM: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase, prokaryotic form
YP_007238555.1	PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase
YP_007238557.1	PFAM: Cytochrome C'
YP_007238558.1	PFAM: Protein of unknown function (DUF1090)
YP_007238559.1	PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain
YP_007238560.1	PFAM: Oxidoreductase FAD-binding domain; Ferric reductase like transmembrane component; Oxidoreductase NAD-binding domain
YP_007238561.1	PFAM: ABC transporter
YP_007238562.1	PFAM: ABC-2 type transporter
YP_007238564.1	PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain; TIGRFAM: S-adenosylmethionine synthetase
YP_007238565.1	PFAM: Bacterial regulatory protein, arsR family; Methyltransferase domain
YP_007238566.1	PFAM: LysE type translocator
YP_007238567.1	PFAM: Taurine catabolism dioxygenase TauD, TfdA family
YP_007238568.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_007238569.1	PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast
YP_007238570.1	PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: erythrose-4-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase, type I
YP_007238571.1	PFAM: Phosphoglycerate kinase
YP_007238573.1	PFAM: Membrane-bound lysozyme-inhibitor of c-type lysozyme
YP_007238574.1	PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-bisphosphate aldolase, class II, Calvin cycle subtype
YP_007238575.1	PFAM: Response regulator receiver domain
YP_007238576.1	PFAM: Methyltransferase domain
YP_007238577.1	PFAM: Protein of unknown function (DUF3509)
YP_007238578.1	PFAM: Hemerythrin HHE cation binding domain
YP_007238579.1	PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain
YP_007238582.1	PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family
YP_007238583.1	PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_007238584.1	PFAM: Fusaric acid resistance protein family; TIGRFAM: integral membrane protein, YccS/YhfK family; hypothetical membrane protein, TIGR01666
YP_007238585.1	PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase; manually curated
YP_007238586.1	PFAM: Protein of unknown function (DUF785)
YP_007238587.1	TIGRFAM: putative solute:sodium symporter small subunit
YP_007238588.1	PFAM: Sodium:solute symporter family; TIGRFAM: probable sodium:solute symporter, VC_2705 subfamily
YP_007238590.1	PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family
YP_007238591.1	PFAM: Putative nucleotidyltransferase substrate binding domain; CBS domain; Cyclic nucleotide-binding domain; Putative nucleotidyltransferase DUF294
YP_007238594.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_007238595.1	PFAM: Malate synthase; TIGRFAM: malate synthase G
YP_007238596.1	PFAM: ACT domain
YP_007238597.1	PFAM: EamA-like transporter family; TIGRFAM: rarD protein
YP_007238598.1	PFAM: short chain dehydrogenase
YP_007238599.1	PFAM: Trehalase
YP_007238600.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_007238601.1	PFAM: EamA-like transporter family
YP_007238602.1	PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit
YP_007238603.1	PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component
YP_007238604.1	PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family
YP_007238605.1	PFAM: SMP-30/Gluconolaconase/LRE-like region
YP_007238606.1	PFAM: NAD dependent epimerase/dehydratase family
YP_007238607.1	PFAM: Branched-chain amino acid transport protein (AzlD)
YP_007238608.1	PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC
YP_007238609.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_007238610.1	PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
YP_007238611.1	PFAM: Tripartite tricarboxylate transporter TctA family
YP_007238613.1	PFAM: Tripartite tricarboxylate transporter family receptor
YP_007238614.1	PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; TIGRFAM: glucarate dehydratase
YP_007238615.1	PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: 5-dehydro-4-deoxyglucarate dehydratase
YP_007238616.1	PFAM: Aldehyde dehydrogenase family
YP_007238617.1	PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; TIGRFAM: glucarate dehydratase
YP_007238618.1	PFAM: SAF domain; D-galactarate dehydratase / Altronate hydrolase, C terminus; TIGRFAM: galactarate dehydratase
YP_007238619.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_007238620.1	PFAM: Aldose 1-epimerase
YP_007238621.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor
YP_007238623.1	PFAM: PepSY-associated TM helix
YP_007238624.1	PFAM: Protein of unknown function (DUF3325)
YP_007238625.1	PFAM: outer membrane porin, OprD family
YP_007238626.1	PFAM: Late embryogenesis abundant protein
YP_007238627.1	PFAM: SPFH domain / Band 7 family
YP_007238628.1	PFAM: NfeD-like
YP_007238631.1	PFAM: short chain dehydrogenase
YP_007238632.1	PFAM: Uncharacterized protein family UPF0057
YP_007238633.1	PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; CHASE3 domain
YP_007238634.1	PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain
YP_007238635.1	PFAM: CheB methylesterase
YP_007238636.1	PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_007238637.1	PFAM: Uncharacterized ACR, YdiU/UPF0061 family
YP_007238638.1	PFAM: Mechanosensitive ion channel
YP_007238639.1	PFAM: TrkA-C domain; Sodium/hydrogen exchanger family; Transporter associated domain
YP_007238640.1	PFAM: Acyl-CoA dehydrogenase N terminal; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_007238641.1	PFAM: Polyprenyl synthetase
YP_007238642.1	PFAM: FMN-dependent dehydrogenase; TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 2
YP_007238643.1	PFAM: UDP-glucoronosyl and UDP-glucosyl transferase; TIGRFAM: glycosyltransferase, MGT family
YP_007238644.1	PFAM: Lycopene cyclase protein; TIGRFAM: lycopene cyclase family protein; lycopene cyclase
YP_007238645.1	PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase
YP_007238646.1	PFAM: Squalene/phytoene synthase
YP_007238647.1	PFAM: Fatty acid hydroxylase superfamily
YP_007238648.1	PFAM: 2-nitropropane dioxygenase
YP_007238649.1	PFAM: Protein of unknown function (DUF519)
YP_007238650.1	PFAM: Phosphotransferase enzyme family
YP_007238651.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein
YP_007238652.1	PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthetase
YP_007238653.1	PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase
YP_007238654.1	PFAM: alpha/beta hydrolase fold
YP_007238655.1	PFAM: Methyltransferase domain; TIGRFAM: biotin biosynthesis protein BioC
YP_007238656.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: dethiobiotin synthase
YP_007238658.1	PFAM: Acyl-CoA dehydrogenase N terminal; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_007238659.1	PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_007238660.1	PFAM: Acyl-CoA dehydrogenase N terminal; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_007238661.1	PFAM: Phage integrase family
YP_007238663.1	PFAM: Phage integrase family
YP_007238664.1	PFAM: Integrase core domain
YP_007238665.1	PFAM: Transposase
YP_007238666.1	PFAM: ABC transporter; TIGRFAM: phosphonate ABC transporter, ATP-binding protein
YP_007238667.1	PFAM: NMT1/THI5 like; TIGRFAM: phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein
YP_007238668.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphonate ABC transporter, permease protein PhnE
YP_007238669.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_007238670.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_007238672.1	PFAM: Helix-turn-helix
YP_007238674.1	manually curated
YP_007238675.1	PFAM: NACHT domain
YP_007238678.1	PFAM: Subtilase family
YP_007238679.1	PFAM: ATPase family associated with various cellular activities (AAA)
YP_007238680.1	PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase
YP_007238681.1	PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase
YP_007238682.1	PFAM: EAL domain; GAF domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain
YP_007238684.1	PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form
YP_007238685.1	PFAM: Transketolase, thiamine diphosphate binding domain; TIGRFAM: pyruvate dehydrogenase E1 component, homodimeric type
YP_007238686.1	PFAM: GlnD PII-uridylyltransferase; Glutamate-ammonia ligase adenylyltransferase
YP_007238687.1	PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group I
YP_007238688.1	PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase II
YP_007238689.1	PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase I
YP_007238690.1	PFAM: Glycosyl transferases group 1
YP_007238691.1	PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family
YP_007238692.1	PFAM: Glycosyltransferase family 9 (heptosyltransferase)
YP_007238693.1	PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family
YP_007238694.1	PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family
YP_007238695.1	PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family
YP_007238696.1	PFAM: Carbamoyltransferase
YP_007238697.1	PFAM: Glycosyl transferases group 1
YP_007238698.1	PFAM: Glycosyltransferase family 25 (LPS biosynthesis protein)
YP_007238701.1	PFAM: Glycosyltransferase sugar-binding region containing DXD motif
YP_007238702.1	PFAM: Bacterial transferase hexapeptide (three repeats)
YP_007238703.1	PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family
YP_007238704.1	PFAM: ABC transporter; ABC transporter transmembrane region; TIGRFAM: lipid A export permease/ATP-binding protein MsbA
YP_007238705.1	PFAM: Mig-14
YP_007238706.1	PFAM: GlcNAc-PI de-N-acetylase
YP_007238707.1	PFAM: Cytidylyltransferase; pfkB family carbohydrate kinase; TIGRFAM: rfaE bifunctional protein, domain II; rfaE bifunctional protein, domain I; cytidyltransferase-related domain
YP_007238709.1	PFAM: Aldo/keto reductase family
YP_007238710.1	PFAM: FAD dependent oxidoreductase
YP_007238711.1	PFAM: Small Multidrug Resistance protein
YP_007238712.1	PFAM: Glycosyl transferases group 1; 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
YP_007238713.1	PFAM: Outer membrane efflux protein; TIGRFAM: type I secretion outer membrane protein, TolC family
YP_007238714.1	PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC
YP_007238715.1	PFAM: Protein of unknown function (DUF3298)
YP_007238716.1	PFAM: NUDIX domain; TIGRFAM: nudix-type nucleoside diphosphatase, YffH/AdpP family
YP_007238717.1	PFAM: Protein of unknown function (DUF1249)
YP_007238718.1	PFAM: Calcineurin-like phosphoesterase C-terminal; Calcineurin-like phosphoesterase
YP_007238719.1	PFAM: Uncharacterised protein family (UPF0227)
YP_007238720.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA topoisomerase IV, B subunit, proteobacterial
YP_007238722.1	PFAM: Retroviral aspartyl protease; TIGRFAM: clan AA aspartic protease, TIGR02281 family
YP_007238723.1	PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA topoisomerase IV, A subunit, proteobacterial
YP_007238724.1	PFAM: Protein of unknown function (DUF330)
YP_007238725.1	PFAM: HAMP domain; Bacterial virulence factor haemolysin
YP_007238726.1	PFAM: ACT domain; haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; phosphoserine phosphatase SerB
YP_007238727.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_007238728.1	PFAM: EAL domain; Response regulator receiver domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain
YP_007238730.1	PFAM: Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor
YP_007238731.1	PFAM: Rhodanese-like domain
YP_007238732.1	PFAM: HDOD domain
YP_007238733.1	PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: flagellar motor stator protein MotA
YP_007238734.1	PFAM: OmpA family
YP_007238735.1	PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A
YP_007238737.1	PFAM: Exonuclease
YP_007238738.1	PFAM: Semialdehyde dehydrogenase, NAD binding domain
YP_007238739.1	PFAM: MORN repeat; Peptidase C13 family
YP_007238740.1	PFAM: MaoC like domain
YP_007238741.1	PFAM: LrgA family
YP_007238742.1	PFAM: LrgB-like family; TIGRFAM: TIGR00659 family protein
YP_007238743.1	PFAM: ATP-dependent protease La (LON) domain
YP_007238744.1	PFAM: PAP2 superfamily; SNARE associated Golgi protein
YP_007238745.1	PFAM: Aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase
YP_007238746.1	PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain
YP_007238747.1	PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein
YP_007238748.1	PFAM: Predicted SPOUT methyltransferase; TIGRFAM: rRNA large subunit m3Psi methyltransferase RlmH
YP_007238749.1	PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2
YP_007238750.1	PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA
YP_007238751.1	TIGRFAM: lytic murein transglycosylase B
YP_007238752.1	PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; Sporulation related domain; TIGRFAM: rare lipoprotein A
YP_007238753.1	PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain
YP_007238754.1	PFAM: Protein of unknown function (DUF493)
YP_007238755.1	PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: lipoate-protein ligase B
YP_007238756.1	PFAM: Radical SAM superfamily; TIGRFAM: lipoate synthase
YP_007238758.1	PFAM: Putative peptidoglycan binding domain; TIGRFAM: lytic murein transglycosylase
YP_007238759.1	PFAM: Domain of unknown function
YP_007238760.1	PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit
YP_007238761.1	PFAM: Rare lipoprotein B family
YP_007238762.1	PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family
YP_007238764.1	PFAM: DUF218 domain
YP_007238765.1	PFAM: Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase
YP_007238766.1	PFAM: CBS domain; Transporter associated domain
YP_007238767.1	PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family
YP_007238768.1	PFAM: PhoH-like protein
YP_007238769.1	PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; radical SAM methylthiotransferase, MiaB/RimO family
YP_007238770.1	PFAM: Sel1 repeat
YP_007238772.1	PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase
YP_007238773.1	PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase
YP_007238774.1	PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; manually curated
YP_007238775.1	PFAM: 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; 7TMR-DISM extracellular 2; His Kinase A (phosphoacceptor) domain
YP_007238776.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain
YP_007238777.1	PFAM: Ion transport protein
YP_007238778.1	PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain; Citrate lyase, alpha subunit (CitF); TIGRFAM: succinate CoA transferases
YP_007238779.1	PFAM: Bacterial AMP nucleoside phosphorylase N-terminus; Phosphorylase superfamily; TIGRFAM: AMP nucleosidase
YP_007238780.1	PFAM: Protein of unknown function (DUF2789)
YP_007238781.1	PFAM: HupE / UreJ protein
YP_007238782.1	PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: urease accessory protein UreG
YP_007238784.1	PFAM: UreF
YP_007238785.1	PFAM: UreE urease accessory protein, N-terminal domain; UreE urease accessory protein, C-terminal domain
YP_007238786.1	PFAM: Acetyltransferase (GNAT) family
YP_007238787.1	PFAM: EamA-like transporter family
YP_007238789.1	PFAM: Bacterial protein of unknown function (Gcw_chp); TIGRFAM: conserved hypothetical protein, proteobacterial
YP_007238790.1	PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family
YP_007238791.1	PFAM: GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_007238792.1	PFAM: Permease for cytosine/purines, uracil, thiamine, allantoin; TIGRFAM: NCS1 nucleoside transporter family
YP_007238793.1	PFAM: Curlin associated repeat
YP_007238794.1	PFAM: Urease alpha-subunit, N-terminal domain; Amidohydrolase family; TIGRFAM: urease, alpha subunit
YP_007238795.1	PFAM: Urease beta subunit; TIGRFAM: urease, beta subunit
YP_007238796.1	PFAM: Acetyltransferase (GNAT) family
YP_007238797.1	PFAM: Urease, gamma subunit; TIGRFAM: urease, gamma subunit
YP_007238798.1	PFAM: UreD urease accessory protein
YP_007238799.1	PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Uncharacterised protein family (UPF0104); haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; magnesium-translocating P-type ATPase; conserved hypothetical protein
YP_007238800.1	PFAM: ABC transporter; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE
YP_007238801.1	PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; TIGRFAM: urea ABC transporter, ATP-binding protein UrtD
YP_007238802.1	PFAM: Branched-chain amino acid transport system / permease component; TIGRFAM: urea ABC transporter, permease protein UrtC
YP_007238803.1	PFAM: Branched-chain amino acid transport system / permease component; TIGRFAM: urea ABC transporter, permease protein UrtB
YP_007238804.1	TIGRFAM: urea ABC transporter, urea binding protein
YP_007238805.1	PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase
YP_007238806.1	PFAM: Protein of unknown function (DUF2788)
YP_007238808.1	PFAM: MarR family; AsnC family
YP_007238809.1	PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter
YP_007238811.1	PFAM: DEAD/DEAH box helicase
YP_007238812.1	manually curated
YP_007238813.1	PFAM: Helix-turn-helix
YP_007238815.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: heavy metal response regulator
YP_007238816.1	manually curated
YP_007238817.1	PFAM: Multicopper oxidase; TIGRFAM: copper-resistance protein, CopA family; Tat (twin-arginine translocation) pathway signal sequence
YP_007238819.1	PFAM: Copper resistance protein B precursor (CopB); manually curated
YP_007238821.1	PFAM: Domain of Unknown Function (DUF326); manually curated
YP_007238822.1	PFAM: short chain dehydrogenase
YP_007238823.1	PFAM: Domain of unknown function (DUF305)
YP_007238825.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: heavy metal sensor kinase
YP_007238827.1	PFAM: Protein of unknown function (DUF2933)
YP_007238829.1	PFAM: Copper binding periplasmic protein CusF
YP_007238830.1	PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium)
YP_007238831.1	PFAM: Copper binding periplasmic protein CusF; TIGRFAM: RND family efflux transporter, MFP subunit
YP_007238832.1	PFAM: Outer membrane efflux protein
YP_007238833.1	PFAM: E1-E2 ATPase; YHS domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; manually curated
YP_007238837.1	PFAM: haloacid dehalogenase-like hydrolase
YP_007238838.1	PFAM: Cation efflux family; Heavy-metal-associated domain
YP_007238839.1	PFAM: MerR family regulatory protein; MerR, DNA binding; TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator
YP_007238841.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: heavy metal sensor kinase
YP_007238842.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: heavy metal response regulator
YP_007238843.1	PFAM: outer membrane porin, OprD family
YP_007238844.1	manually curated
YP_007238845.1	PFAM: Outer membrane efflux protein
YP_007238846.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Membrane Fusion Protein cluster 2 (function with RND porters)
YP_007238847.1	PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium)
YP_007238849.1	PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; manually curated
YP_007238850.1	PFAM: Isoprenylcysteine carboxyl methyltransferase (ICMT) family
YP_007238851.1	PFAM: DSBA-like thioredoxin domain
YP_007238852.1	PFAM: Disulfide bond formation protein DsbB
YP_007238853.1	PFAM: Sodium Bile acid symporter family
YP_007238856.1	PFAM: UvrD/REP helicase
YP_007238858.1	PFAM: Helicase conserved C-terminal domain; Helicase associated domain (HA2); ATP-dependent helicase C-terminal; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent helicase HrpB
YP_007238859.1	PFAM: Phage integrase family; manually curated
YP_007238861.1	PFAM: Phage integrase family
YP_007238863.1	PFAM: Helicase conserved C-terminal domain; ATP-dependent helicase C-terminal; Helicase associated domain (HA2); TIGRFAM: ATP-dependent helicase HrpB
YP_007238864.1	PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_007238865.1	PFAM: short chain dehydrogenase
YP_007238866.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_007238867.1	PFAM: Uncharacterised protein family (UPF0259)
YP_007238868.1	PFAM: Protein of unknown function DUF88
YP_007238869.1	PFAM: Dehydrogenase E1 component; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase
YP_007238870.1	PFAM: Polyprenyl synthetase
YP_007238871.1	PFAM: Exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit
YP_007238872.1	PFAM: FhuF 2Fe-2S C-terminal domain; TIGRFAM: siderophore ferric iron reductase, AHA_1954 family
YP_007238873.1	PFAM: Ferric iron reductase FhuF-like transporter; IucA / IucC family
YP_007238874.1	PFAM: Siderophore biosynthesis protein domain
YP_007238875.1	PFAM: Major Facilitator Superfamily
YP_007238877.1	PFAM: Pyridoxal-dependent decarboxylase conserved domain
YP_007238878.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_007238879.1	PFAM: EAL domain; HAMP domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain
YP_007238880.1	PFAM: NMT1/THI5 like
YP_007238881.1	PFAM: CheB methylesterase; Response regulator receiver domain
YP_007238882.1	PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain
YP_007238883.1	PFAM: CheW-like domain
YP_007238884.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_007238885.1	PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain
YP_007238886.1	PFAM: STAS domain
YP_007238887.1	PFAM: Response regulator receiver domain
YP_007238888.1	PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_007238889.1	PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box
YP_007238890.1	PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_007238891.1	PFAM: PAS fold
YP_007238892.1	PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_007238893.1	PFAM: Inorganic pyrophosphatase
YP_007238894.1	PFAM: Phosphoenolpyruvate:glucose-phosphotransferase regulator
YP_007238895.1	PFAM: PhoD-like phosphatase
YP_007238896.1	PFAM: Ethanolamine ammonia-lyase light chain (EutC)
YP_007238897.1	PFAM: Ethanolamine ammonia lyase large subunit (EutB)
YP_007238898.1	PFAM: Amino acid permease; TIGRFAM: ethanolamine permease; TC 2.A.3.5.1
YP_007238899.1	PFAM: Aldehyde dehydrogenase family
YP_007238900.1	PFAM: Iron-containing alcohol dehydrogenase
YP_007238901.1	PFAM: Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase
YP_007238902.1	PFAM: Flavoprotein; TIGRFAM: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases
YP_007238903.1	PFAM: Protein of unknown function (DUF1375)
YP_007238904.1	PFAM: FtsH Extracellular; Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH
YP_007238905.1	PFAM: Domain of unknown function (DUF1730); TIGRFAM: iron-sulfur cluster binding protein, putative
YP_007238906.1	PFAM: YjeF-related protein N-terminus; Carbohydrate kinase; TIGRFAM: yjeF C-terminal region, hydroxyethylthiazole kinase-related; yjeF N-terminal region
YP_007238907.1	PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family
YP_007238908.1	PFAM: N-acetylmuramoyl-L-alanine amidase; Localisation of periplasmic protein complexes; LysM domain
YP_007238909.1	PFAM: MutL C terminal dimerisation domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL
YP_007238910.1	PFAM: IPP transferase; TIGRFAM: tRNA dimethylallyltransferase
YP_007238911.1	PFAM: LSM domain; TIGRFAM: RNA chaperone Hfq
YP_007238912.1	PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX
YP_007238913.1	PFAM: Bacterial membrane protein N terminal; SPFH domain / Band 7 family; TIGRFAM: HflK protein
YP_007238914.1	PFAM: SPFH domain / Band 7 family; TIGRFAM: HflC protein
YP_007238915.1	TIGRFAM: ATP phosphoribosyltransferase, regulatory subunit
YP_007238916.1	PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase
YP_007238917.1	PFAM: Ribonuclease B OB domain; RNB domain; Ribonuclease R winged-helix domain; S1 RNA binding domain; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonucleases
YP_007238918.1	PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3
YP_007238919.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold
YP_007238920.1	PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6
YP_007238921.1	PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18
YP_007238923.1	PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9
YP_007238924.1	PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase
YP_007238925.1	PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase
YP_007238926.1	PFAM: 7TM diverse intracellular signalling; GGDEF domain; 7TMR-DISM extracellular 2; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_007238927.1	PFAM: Domain of unknown function (DUF3362); Radical SAM superfamily; Radical SAM N-terminal; TIGRFAM: uncharacterized radical SAM protein YgiQ
YP_007238928.1	PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_007238929.1	PFAM: GGDEF domain; Response regulator receiver domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_007238930.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2333)
YP_007238931.1	PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain
YP_007238932.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_007238933.1	PFAM: MYND finger
YP_007238934.1	TIGRFAM: outer membrane assembly lipoprotein YfiO
YP_007238935.1	PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family
YP_007238936.1	PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: uncharacterized protein, YfiH family
YP_007238937.1	PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB
YP_007238938.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_007238939.1	PFAM: Protein of unknown function (DUF3094)
YP_007238940.1	PFAM: Protein of unknown function (DUF1631)
YP_007238941.1	PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase
YP_007238942.1	PFAM: Protein of unknown function (DUF1043)
YP_007238943.1	PFAM: Thioesterase domain
YP_007238944.1	PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase
YP_007238945.1	PFAM: AFG1-like ATPase
YP_007238946.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_007238947.1	PFAM: Endonuclease V
YP_007238948.1	PFAM: N-acetylmuramoyl-L-alanine amidase
YP_007238949.1	PFAM: CobD/Cbib protein
YP_007238950.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_007238951.1	PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family
YP_007238953.1	PFAM: 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain; Metal binding domain of Ada; 6-O-methylguanine DNA methyltransferase, DNA binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; TIGRFAM: O-6-methylguanine DNA methyltransferase
YP_007238954.1	PFAM: RIO1 family
YP_007238955.1	PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family
YP_007238956.1	PFAM: AcrB/AcrD/AcrF family
YP_007238957.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_007238958.1	PFAM: Ferritin-like domain; TIGRFAM: bacterioferritin
YP_007238959.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_007238960.1	PFAM: MerR family regulatory protein; MerR, DNA binding; TIGRFAM: Cu(I)-responsive transcriptional regulator
YP_007238961.1	PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; copper ion binding protein; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_007238962.1	PFAM: Heavy-metal-associated domain
YP_007238963.1	PFAM: MAATS-type transcriptional repressor, C-terminal region; Bacterial regulatory proteins, tetR family
YP_007238964.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; Multidrug resistance protein
YP_007238966.1	PFAM: Adenosine/AMP deaminase; TIGRFAM: adenosine deaminase
YP_007238967.1	PFAM: Uncharacterized protein family UPF0029; Domain of unknown function (DUF1949); TIGRFAM: uncharacterized protein, YigZ family
YP_007238968.1	PFAM: Domain of Unknown Function (DUF326)
YP_007238969.1	PFAM: Protein of unknown function (DUF1826)
YP_007238970.1	PFAM: CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain
YP_007238971.1	PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA; manually curated
YP_007238972.1	PFAM: Bacterial regulatory proteins, tetR family; YcdC-like protein, C-terminal region; manually curated
YP_007238974.1	PFAM: Sugar (and other) transporter; Major Facilitator Superfamily
YP_007238975.1	PFAM: DJ-1/PfpI family; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_007238976.1	PFAM: NADH:flavin oxidoreductase / NADH oxidase family
YP_007238977.1	PFAM: Bacterial regulatory protein, arsR family
YP_007238978.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_007238979.1	PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain
YP_007238981.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_007238982.1	PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
YP_007238983.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_007238984.1	PFAM: EamA-like transporter family
YP_007238985.1	PFAM: Membrane bound L-sorbosone dehydrogenase
YP_007238987.1	PFAM: GGDEF domain; CHASE domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_007238990.1	PFAM: GGDEF domain; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_007238991.1	PFAM: Protein of unknown function DUF88
YP_007238992.1	PFAM: 'Cold-shock' DNA-binding domain; Protein of unknown function (DUF1294)
YP_007238993.1	PFAM: PhnA protein; PhnA Zinc-Ribbon; TIGRFAM: alkylphosphonate utilization operon protein PhnA
YP_007238994.1	PFAM: Thioesterase superfamily
YP_007238995.1	PFAM: Cytochrome c
YP_007238996.1	PFAM: Amidohydrolase family
YP_007238997.1	PFAM: Permease for cytosine/purines, uracil, thiamine, allantoin
YP_007238998.1	PFAM: Catalase; Catalase-related immune-responsive
YP_007238999.1	PFAM: Ankyrin repeat
YP_007239000.1	PFAM: Cyanate lyase C-terminal domain; TIGRFAM: cyanate hydratase
YP_007239001.1	PFAM: Phytanoyl-CoA dioxygenase (PhyH)
YP_007239002.1	PFAM: Aminotransferase class I and II
YP_007239003.1	PFAM: Pterin 4 alpha carbinolamine dehydratase
YP_007239004.1	PFAM: Biopterin-dependent aromatic amino acid hydroxylase; TIGRFAM: phenylalanine-4-hydroxylase, monomeric form
YP_007239005.1	PFAM: ACT domain; Sigma-54 interaction domain; PAS fold
YP_007239006.1	PFAM: CheB methylesterase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; CheR methyltransferase, SAM binding domain; His Kinase A (phosphoacceptor) domain; CheR methyltransferase, all-alpha domain; PAS fold; TIGRFAM: PAS domain S-box
YP_007239007.1	PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, single chain form
YP_007239008.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_007239009.1	PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family
YP_007239010.1	PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family
YP_007239011.1	PFAM: Protein of unknown function, DUF488
YP_007239014.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_007239015.1	PFAM: FMN-binding domain
YP_007239016.1	PFAM: Cytochrome C oxidase subunit II, periplasmic domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_007239017.1	PFAM: Periplasmic copper-binding protein (NosD); TIGRFAM: parallel beta-helix repeat (two copies)
YP_007239018.1	PFAM: ABC transporter
YP_007239020.1	PFAM: NosL
YP_007239021.1	PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family
YP_007239022.1	PFAM: NnrS protein
YP_007239023.1	PFAM: short chain dehydrogenase
YP_007239024.1	PFAM: CBS domain; HPP family
YP_007239025.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_007239026.1	PFAM: Prokaryotic N-terminal methylation motif; Type II transport protein GspH; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_007239029.1	TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_007239030.1	TIGRFAM: type IV pilus modification protein PilV; prepilin-type N-terminal cleavage/methylation domain
YP_007239031.1	PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_007239032.1	PFAM: Cytochrome c; Cytochrome D1 heme domain
YP_007239033.1	PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase
YP_007239034.1	PFAM: Radical SAM superfamily; TIGRFAM: heme d1 biosynthesis radical SAM protein NirJ; radical SAM additional 4Fe4S-binding domain
YP_007239036.1	PFAM: Cytochrome c oxidase subunit III
YP_007239037.1	PFAM: AAA domain (dynein-related subfamily); CbbQ/NirQ/NorQ C-terminal
YP_007239038.1	PFAM: Cytochrome c; Cytochrome D1 heme domain
YP_007239039.1	PFAM: NapC/NirT cytochrome c family, N-terminal region; TIGRFAM: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family
YP_007239040.1	PFAM: Ethylbenzene dehydrogenase
YP_007239042.1	PFAM: Cytochrome c
YP_007239044.1	PFAM: Cytochrome D1 heme domain
YP_007239049.1	PFAM: Cytochrome c
YP_007239050.1	PFAM: Cytochrome C and Quinol oxidase polypeptide I
YP_007239051.1	PFAM: von Willebrand factor type A domain
YP_007239053.1	PFAM: Cyclic nucleotide-binding domain
YP_007239055.1	PFAM: Hemerythrin HHE cation binding domain; Domain of Unknown function (DUF542); TIGRFAM: iron-sulfur cluster repair di-iron protein
YP_007239056.1	PFAM: GAF domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain
YP_007239058.1	PFAM: Peptidase family U32
YP_007239059.1	PFAM: Peptidase family U32
YP_007239060.1	PFAM: SCP-2 sterol transfer family
YP_007239061.1	PFAM: DGC domain
YP_007239062.1	PFAM: Cyclic nucleotide-binding domain
YP_007239063.1	PFAM: ATP cone domain; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase
YP_007239065.1	PFAM: Radical SAM superfamily; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein
YP_007239067.1	PFAM: Iron permease FTR1 family; TIGRFAM: FTR1 family protein
YP_007239069.1	PFAM: Fe2+ transport protein
YP_007239070.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_007239072.1	PFAM: Dehydratase family; TIGRFAM: 6-phosphogluconate dehydratase
YP_007239073.1	PFAM: Glucokinase; TIGRFAM: glucokinase, proteobacterial type
YP_007239074.1	PFAM: SIS domain; Helix-turn-helix domain, rpiR family
YP_007239075.1	PFAM: Glucose-6-phosphate dehydrogenase, NAD binding domain; Glucose-6-phosphate dehydrogenase, C-terminal domain; TIGRFAM: glucose-6-phosphate 1-dehydrogenase
YP_007239076.1	TIGRFAM: 6-phosphogluconolactonase
YP_007239077.1	PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase
YP_007239078.1	PFAM: Aldehyde dehydrogenase family
YP_007239079.1	PFAM: Aldo/keto reductase family
YP_007239080.1	PFAM: Small Multidrug Resistance protein
YP_007239081.1	PFAM: Maltose operon periplasmic protein precursor (MalM)
YP_007239082.1	PFAM: LamB porin
YP_007239083.1	PFAM: Domain of unknown function (DUF1921); Starch binding domain; Alpha amylase, catalytic domain
YP_007239085.1	PFAM: Alpha amylase, catalytic domain
YP_007239086.1	PFAM: Bacterial extracellular solute-binding protein
YP_007239087.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_007239088.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_007239089.1	PFAM: Bacterial regulatory proteins, luxR family
YP_007239092.1	PFAM: Maltose acetyltransferase; Bacterial transferase hexapeptide (three repeats)
YP_007239093.1	PFAM: Alpha amylase, catalytic domain
YP_007239094.1	PFAM: ABC transporter; TOBE domain
YP_007239095.1	PFAM: Helix-turn-helix
YP_007239096.1	PFAM: HipA-like C-terminal domain; HipA-like N-terminal domain; TIGRFAM: HipA N-terminal domain
YP_007239097.1	PFAM: N-6 DNA Methylase; HsdM N-terminal domain
YP_007239098.1	PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit
YP_007239099.1	PFAM: Restriction endonuclease
YP_007239100.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_007239101.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_007239103.1	PFAM: Toxin with endonuclease activity YhaV; TIGRFAM: pentatricopeptide repeat domain (PPR motif)
YP_007239105.1	PFAM: DJ-1/PfpI family; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_007239106.1	PFAM: Protein of unknown function (DUF3422); manually curated
YP_007239107.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_007239108.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
YP_007239109.1	PFAM: Uncharacterised BCR, COG1937; manually curated
YP_007239110.1	PFAM: short chain dehydrogenase
YP_007239111.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_007239112.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_007239113.1	PFAM: VRR-NUC domain; manually curated
YP_007239115.1	PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit
YP_007239117.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: luciferase-type oxidoreductase, BA3436 family
YP_007239118.1	PFAM: NADH:flavin oxidoreductase / NADH oxidase family
YP_007239119.1	PFAM: Aldehyde dehydrogenase family
YP_007239122.1	manually curated
YP_007239123.1	PFAM: Exonuclease
YP_007239124.1	PFAM: Tellurite resistance protein TerB
YP_007239125.1	PFAM: Protein of unknown function (DUF2791)
YP_007239126.1	PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase
YP_007239128.1	PFAM: Phage integrase family
YP_007239129.1	PFAM: SEC-C motif
YP_007239130.1	PFAM: EamA-like transporter family
YP_007239131.1	PFAM: EamA-like transporter family
YP_007239132.1	PFAM: AsnC family
YP_007239133.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_007239134.1	PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain
YP_007239135.1	PFAM: Glutaredoxin; TIGRFAM: Glutaredoxin, GrxC family
YP_007239136.1	PFAM: Antibiotic biosynthesis monooxygenase
YP_007239137.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_007239138.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: zinc-binding alcohol dehydrogenase family protein
YP_007239139.1	PFAM: Major royal jelly protein
YP_007239140.1	PFAM: Substrate binding domain of ABC-type glycine betaine transport system
YP_007239141.1	PFAM: Nitroreductase family
YP_007239142.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: putative quinone oxidoreductase, YhdH/YhfP family
YP_007239143.1	PFAM: Bacterial regulatory proteins, tetR family
YP_007239148.1	PFAM: Uncharacterised BCR, COG1937
YP_007239149.1	PFAM: High-affinity nickel-transport protein
YP_007239150.1	PFAM: SNARE associated Golgi protein
YP_007239151.1	PFAM: TraX protein
YP_007239153.1	PFAM: Rhodanese-like domain
YP_007239154.1	PFAM: Chromate transporter; TIGRFAM: chromate transporter, chromate ion transporter (CHR) family
YP_007239155.1	PFAM: Chromate resistance exported protein; manually curated
YP_007239156.1	PFAM: Phage integrase family
YP_007239157.1	PFAM: Phage integrase family
YP_007239159.1	PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain
YP_007239160.1	PFAM: Uncharacterised ACR, YkgG family COG1556
YP_007239161.1	PFAM: Domain of unknown function (DUF3390); Uncharacterised ACR, YkgG family COG1556; TIGRFAM: iron-sulfur cluster-binding protein
YP_007239162.1	PFAM: Cysteine-rich domain
YP_007239163.1	PFAM: L-lactate permease; TIGRFAM: L-lactate transport
YP_007239164.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_007239165.1	PFAM: SmpB protein; TIGRFAM: SsrA-binding protein
YP_007239166.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_007239167.1	PFAM: Uncharacterised protein family (UPF0125)
YP_007239168.1	PFAM: SmpA / OmlA family
YP_007239169.1	PFAM: Ferric uptake regulator family
YP_007239170.1	PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN
YP_007239171.1	PFAM: GrpE
YP_007239172.1	PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK
YP_007239173.1	PFAM: DnaJ C terminal region; DnaJ central domain (4 repeats); DnaJ domain; TIGRFAM: chaperone protein DnaJ
YP_007239174.1	PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase
YP_007239175.1	PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit
YP_007239176.1	PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit
YP_007239177.1	PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA
YP_007239179.1	PFAM: CRS1 / YhbY (CRM) domain; TIGRFAM: putative RNA-binding protein, YhbY family
YP_007239180.1	PFAM: FtsH Extracellular; Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH
YP_007239181.1	PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase
YP_007239182.1	PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase
YP_007239183.1	PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase
YP_007239184.1	PFAM: Uncharacterised BCR, YhbC family COG0779
YP_007239185.1	PFAM: NusA N-terminal domain; S1 RNA binding domain; TIGRFAM: transcription termination factor NusA; transcription termination factor NusA, C-terminal duplication
YP_007239186.1	PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; Bacterial translation initiation factor IF-2 associated region; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2
YP_007239187.1	PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A
YP_007239188.1	PFAM: Pseudouridine synthase II TruB, C-terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase
YP_007239189.1	PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle; manually curated
YP_007239190.1	PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; Polyribonucleotide nucleotidyltransferase, RNA binding domain; TIGRFAM: polyribonucleotide nucleotidyltransferase
YP_007239191.1	PFAM: Putative phospholipid-binding domain
YP_007239192.1	PFAM: Protein of unknown function (DUF2845)
YP_007239193.1	PFAM: Protein of unknown function (DUF2845)
YP_007239194.1	PFAM: Domain of Unknown Function (DUF748)
YP_007239195.1	PFAM: S-adenosylmethionine-dependent methyltransferase
YP_007239196.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2236)
YP_007239197.1	PFAM: Phosphoglucose isomerase
YP_007239198.1	PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase
YP_007239199.1	PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase
YP_007239200.1	PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase
YP_007239201.1	PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
YP_007239202.1	PFAM: Poly A polymerase head domain; TIGRFAM: poly(A) polymerase
YP_007239203.1	PFAM: Response regulator receiver domain; Sigma-54 interaction domain
YP_007239204.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: PAS domain S-box
YP_007239206.1	PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-queuosine tRNA(Asp) synthetase
YP_007239207.1	PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA
YP_007239208.1	PFAM: Aminotransferase class I and II
YP_007239209.1	PFAM: Sugar fermentation stimulation protein; TIGRFAM: sugar fermentation stimulation protein
YP_007239210.1	PFAM: RmlD substrate binding domain; TIGRFAM: dTDP-4-dehydrorhamnose reductase
YP_007239211.1	PFAM: Membrane transport protein
YP_007239214.1	PFAM: Uncharacterised protein family (UPF0104); manually curated
YP_007239215.1	PFAM: 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; 7TMR-DISM extracellular 2; His Kinase A (phosphoacceptor) domain
YP_007239216.1	PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase
YP_007239217.1	PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
YP_007239218.1	PFAM: Bacterial regulatory protein, Fis family
YP_007239219.1	PFAM: Dihydrouridine synthase (Dus); TIGRFAM: putative TIM-barrel protein, nifR3 family
YP_007239220.1	PFAM: Protein of unknown function (DUF3426); TIGRFAM: MJ0042 family finger-like domain
YP_007239221.1	PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase
YP_007239222.1	PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit
YP_007239223.1	PFAM: Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein
YP_007239224.1	PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II
YP_007239225.1	PFAM: Disulphide bond corrector protein DsbC; Cytochrome C biogenesis protein transmembrane region
YP_007239226.1	PFAM: Rieske [2Fe-2S] domain
YP_007239227.1	PFAM: FecCD transport family
YP_007239228.1	PFAM: ABC transporter
YP_007239229.1	PFAM: Protein of unknown function, DUF399
YP_007239230.1	PFAM: Cyclic nucleotide-binding domain
YP_007239231.1	PFAM: TfoX C-terminal domain
YP_007239232.1	PFAM: Methyltransferase domain
YP_007239233.1	PFAM: Phosphotransferase enzyme family
YP_007239234.1	PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein 1B
YP_007239236.1	PFAM: Domain of unknown function, DUF446
YP_007239238.1	PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type
YP_007239239.1	PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit
YP_007239240.1	PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase
YP_007239241.1	PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase
YP_007239242.1	PFAM: Oxidoreductase molybdopterin binding domain
YP_007239243.1	PFAM: Ferric reductase like transmembrane component
YP_007239245.1	PFAM: Paraquat-inducible protein A
YP_007239246.1	PFAM: Paraquat-inducible protein A; TIGRFAM: integral membrane protein, PqiA family
YP_007239247.1	PFAM: mce related protein
YP_007239251.1	PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; TIGRFAM: carboxynorspermidine decarboxylase
YP_007239252.1	PFAM: Saccharopine dehydrogenase
YP_007239253.1	PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase, bacterial type
YP_007239255.1	PFAM: Acetyltransferase (GNAT) family; TIGRFAM: ribosomal-protein-alanine acetyltransferase
YP_007239257.1	PFAM: Trehalose-phosphatase; TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB
YP_007239258.1	PFAM: Glycosyltransferase family 20; TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]
YP_007239259.1	PFAM: Carbonic anhydrase
YP_007239260.1	PFAM: EamA-like transporter family
YP_007239264.1	PFAM: outer membrane porin, OprD family
YP_007239265.1	PFAM: Tannase and feruloyl esterase
YP_007239266.1	PFAM: DoxX
YP_007239267.1	PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PAS fold
YP_007239268.1	PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit
YP_007239269.1	PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component
YP_007239270.1	PFAM: Bacterial extracellular solute-binding protein, family 7
YP_007239271.1	PFAM: MerR, DNA binding; Primosomal replication protein priB and priC; MerR family regulatory protein
YP_007239272.1	PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases
YP_007239273.1	PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit
YP_007239274.1	PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit
YP_007239275.1	PFAM: HMGL-like
YP_007239276.1	PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit
YP_007239278.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_007239279.1	PFAM: Carboxyl transferase domain
YP_007239280.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_007239281.1	PFAM: UV-endonuclease UvdE
YP_007239282.1	PFAM: AMP-binding enzyme
YP_007239283.1	PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase AhpD family core domain
YP_007239284.1	PFAM: outer membrane porin, OprD family
YP_007239285.1	PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter
YP_007239286.1	PFAM: ABC transporter
YP_007239288.1	PFAM: Branched-chain amino acid transport system / permease component
YP_007239289.1	PFAM: Branched-chain amino acid transport system / permease component
YP_007239294.1	PFAM: Type I restriction modification DNA specificity domain; manually curated
YP_007239295.1	PFAM: N-6 DNA Methylase; HsdM N-terminal domain
YP_007239296.1	PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit; Domain of unknown function (DUF3559)
YP_007239297.1	PFAM: Fic/DOC family
YP_007239298.1	PFAM: Phage integrase family
YP_007239299.1	PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF
YP_007239300.1	PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase
YP_007239301.1	PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form
YP_007239302.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase
YP_007239303.1	PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase
YP_007239304.1	PFAM: Outer membrane lipoprotein LolB; TIGRFAM: outer membrane lipoprotein LolB
YP_007239305.1	PFAM: Coatomer epsilon subunit
YP_007239306.1	PFAM: Glutamyl-tRNAGlu reductase, N-terminal domain; Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase
YP_007239307.1	PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1
YP_007239308.1	PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases; protein-(glutamine-N5) methyltransferase, release factor-specific
YP_007239309.1	PFAM: MoeZ/MoeB domain; ThiF family
YP_007239310.1	PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase; manually curated
YP_007239311.1	PFAM: Lipid A 3-O-deacylase (PagL)
YP_007239312.1	PFAM: Uncharacterised protein family (UPF0153)
YP_007239313.1	PFAM: Permease family; TIGRFAM: uracil-xanthine permease
YP_007239314.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase
YP_007239315.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase
YP_007239316.1	PFAM: Protein of unknown function (DUF1302)
YP_007239317.1	PFAM: Protein of unknown function (DUF1329)
YP_007239318.1	PFAM: Bacterial regulatory proteins, luxR family
YP_007239319.1	PFAM: Protein of unknown function (DUF3509)
YP_007239320.1	PFAM: YebG protein
YP_007239322.1	PFAM: Protein of unknown function (DUF721)
YP_007239323.1	PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SEC-C motif; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit
YP_007239324.1	PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase
YP_007239325.1	PFAM: Glutathione S-transferase, N-terminal domain
YP_007239326.1	PFAM: NUDIX domain; Thiamine monophosphate synthase/TENI; TIGRFAM: mutator mutT protein; thiamine-phosphate pyrophosphorylase
YP_007239327.1	PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; TIGRFAM: peroxiredoxin
YP_007239328.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: alkyl hydroperoxide reductase, F subunit
YP_007239329.1	PFAM: Protein of unknown function (DUF3182)
YP_007239330.1	PFAM: Prolyl oligopeptidase family
YP_007239332.1	PFAM: Cobalamin adenosyltransferase; TIGRFAM: ATP:cob(I)alamin adenosyltransferase
YP_007239333.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_007239334.1	PFAM: Ketopantoate reductase PanE/ApbA; Ketopantoate reductase PanE/ApbA C terminal; TIGRFAM: 2-dehydropantoate 2-reductase; manually curated
YP_007239335.1	PFAM: Response regulator receiver domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_007239336.1	PFAM: Protein of unknown function (DUF520)
YP_007239337.1	PFAM: Mechanosensitive ion channel
YP_007239338.1	PFAM: Major Facilitator Superfamily; TIGRFAM: AmpG-related permease
YP_007239339.1	PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain
YP_007239340.1	PFAM: Protein of unknown function, DUF481
YP_007239341.1	PFAM: short chain dehydrogenase
YP_007239342.1	PFAM: Pyridoxamine 5'-phosphate oxidase; Protein of unknown function (DUF2470)
YP_007239343.1	PFAM: FxsA cytoplasmic membrane protein
YP_007239344.1	PFAM: Chaperonin 10 Kd subunit
YP_007239345.1	PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL
YP_007239347.1	PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
YP_007239348.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_007239349.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_007239350.1	PFAM: Protein of unknown function (DUF1513)
YP_007239351.1	PFAM: Imelysin
YP_007239352.1	PFAM: Protein of unknown function (DUF1111)
YP_007239353.1	PFAM: Imelysin
YP_007239354.1	PFAM: LemA family
YP_007239355.1	PFAM: E3 Ubiquitin ligase
YP_007239356.1	PFAM: Protein of unknown function (DUF752)
YP_007239357.1	PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_007239358.1	PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain
YP_007239359.1	PFAM: LysE type translocator; TIGRFAM: L-lysine exporter
YP_007239360.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; TIGRFAM: transcriptional regulator, ArgP family
YP_007239363.1	PFAM: GDSL-like Lipase/Acylhydrolase; Autotransporter beta-domain
YP_007239364.1	PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_007239365.1	PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family; TIGRFAM: nicotinate phosphoribosyltransferase
YP_007239366.1	PFAM: Stress-induced bacterial acidophilic repeat motif
YP_007239368.1	PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; Globin
YP_007239370.1	PFAM: Urea transporter
YP_007239371.1	PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase
YP_007239372.1	PFAM: MOFRL family
YP_007239373.1	PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase
YP_007239374.1	PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: hydroxypyruvate isomerase
YP_007239375.1	PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: glyoxylate carboligase
YP_007239376.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_007239377.1	PFAM: HIUase/Transthyretin family; TIGRFAM: hydroxyisourate hydrolase
YP_007239378.1	PFAM: Domain of unknown function (DUF336)
YP_007239379.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: heavy metal response regulator
YP_007239380.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: heavy metal sensor kinase
YP_007239381.1	PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth)
YP_007239382.1	PFAM: EAL domain; GAF domain
YP_007239383.1	PFAM: Domain of unknown function (DUF2383); TIGRFAM: conserved hypothetical protein
YP_007239384.1	PFAM: Bacterial regulatory proteins, tetR family; YcdC-like protein, C-terminal region
YP_007239385.1	PFAM: Nucleoside-specific channel-forming protein, Tsx
YP_007239386.1	PFAM: Nucleoside-specific channel-forming protein, Tsx
YP_007239387.1	PFAM: Permease family; TIGRFAM: uracil-xanthine permease; xanthine permease
YP_007239388.1	PFAM: TrkA-N domain; Sodium/hydrogen exchanger family
YP_007239389.1	PFAM: Permease family; TIGRFAM: uracil-xanthine permease; xanthine permease
YP_007239390.1	PFAM: Cytochrome c; Protein of unknown function (DUF989)
YP_007239391.1	PFAM: Ureidoglycolate hydrolase
YP_007239392.1	PFAM: Allantoicase repeat; TIGRFAM: allantoicase
YP_007239393.1	PFAM: OHCU decarboxylase; TIGRFAM: OHCU decarboxylase
YP_007239394.1	PFAM: Polysaccharide deacetylase; TIGRFAM: putative urate catabolism protein
YP_007239395.1	PFAM: HIUase/Transthyretin family; TIGRFAM: hydroxyisourate hydrolase
YP_007239396.1	PFAM: LysE type translocator
YP_007239397.1	PFAM: Permease family
YP_007239398.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_007239399.1	PFAM: ABC transporter
YP_007239400.1	PFAM: ABC 3 transport family
YP_007239401.1	PFAM: Periplasmic solute binding protein family
YP_007239402.1	PFAM: Amidohydrolase family; TIGRFAM: guanine deaminase
YP_007239403.1	PFAM: XdhC and CoxI family; TIGRFAM: xanthine dehydrogenase accessory protein XdhC
YP_007239404.1	PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; TIGRFAM: xanthine dehydrogenase, molybdopterin binding subunit
YP_007239405.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; FAD binding domain in molybdopterin dehydrogenase; [2Fe-2S] binding domain; CO dehydrogenase flavoprotein C-terminal domain; TIGRFAM: xanthine dehydrogenase, small subunit
YP_007239406.1	PFAM: 2OG-Fe(II) oxygenase superfamily
YP_007239407.1	PFAM: Basic membrane protein
YP_007239408.1	PFAM: Amidohydrolase family
YP_007239409.1	PFAM: short chain dehydrogenase
YP_007239410.1	PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_007239411.1	PFAM: Transglycosylase SLT domain; Bacterial extracellular solute-binding proteins, family 3
YP_007239412.1	PFAM: GIY-YIG catalytic domain
YP_007239413.1	PFAM: Glutathione S-transferase, C-terminal domain
YP_007239415.1	PFAM: Polyphosphate kinase 2 (PPK2)
YP_007239416.1	PFAM: 37-kD nucleoid-associated bacterial protein
YP_007239417.1	PFAM: UbiA prenyltransferase family
YP_007239418.1	PFAM: Major Facilitator Superfamily
YP_007239421.1	PFAM: Protein of unknown function (DUF890)
YP_007239422.1	PFAM: Major Facilitator Superfamily
YP_007239423.1	PFAM: Citrate transporter; TrkA-C domain
YP_007239424.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2131)
YP_007239425.1	PFAM: Citrate transporter
YP_007239426.1	PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase
YP_007239428.1	PFAM: DNA polymerase III chi subunit, HolC
YP_007239429.1	PFAM: Cytosol aminopeptidase family, catalytic domain; Cytosol aminopeptidase family, N-terminal domain
YP_007239430.1	PFAM: Predicted permease YjgP/YjgQ family
YP_007239431.1	PFAM: Predicted permease YjgP/YjgQ family
YP_007239432.1	PFAM: RDD family
YP_007239433.1	PFAM: 'Cold-shock' DNA-binding domain
YP_007239434.1	PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase
YP_007239435.1	PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming
YP_007239436.1	PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit
YP_007239437.1	PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family
YP_007239438.1	PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF
YP_007239439.1	PFAM: Rickettsia 17 kDa surface antigen
YP_007239440.1	PFAM: Inositol monophosphatase family
YP_007239441.1	PFAM: SpoU rRNA Methylase family; TIGRFAM: RNA methyltransferase, TrmH family, group 1
YP_007239442.1	TIGRFAM: serine O-acetyltransferase
YP_007239443.1	PFAM: Transcriptional regulator; TIGRFAM: iron-sulfur cluster assembly transcription factor IscR; Rrf2 family protein
YP_007239444.1	PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS; cysteine desulfurase IscS
YP_007239445.1	PFAM: NifU-like N terminal domain; TIGRFAM: FeS cluster assembly scaffold IscU
YP_007239446.1	PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: iron-sulfur cluster assembly protein IscA; Iron-sulfur cluster assembly accessory protein
YP_007239447.1	PFAM: DnaJ domain; HSCB C-terminal oligomerisation domain; TIGRFAM: Fe-S protein assembly co-chaperone HscB
YP_007239448.1	PFAM: Hsp70 protein; TIGRFAM: Fe-S protein assembly chaperone HscA
YP_007239449.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; TIGRFAM: ferredoxin, 2Fe-2S type, ISC system
YP_007239450.1	PFAM: Protein of unknown function (DUF528); TIGRFAM: FeS assembly protein IscX
YP_007239451.1	PFAM: Nucleoside diphosphate kinase
YP_007239452.1	PFAM: Radical SAM superfamily; TIGRFAM: 23S rRNA m2A2503 methyltransferase
YP_007239453.1	TIGRFAM: type IV pilus biogenesis/stability protein PilW
YP_007239454.1	PFAM: Helix-turn-helix
YP_007239455.1	PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
YP_007239456.1	PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase
YP_007239457.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2133)
YP_007239458.1	PFAM: PQQ enzyme repeat; TIGRFAM: outer membrane assembly lipoprotein YfgL
YP_007239459.1	PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain
YP_007239460.1	PFAM: Serine acetyltransferase, N-terminal; TIGRFAM: serine O-acetyltransferase
YP_007239461.1	PFAM: Aminotransferase class I and II
YP_007239462.1	PFAM: Carbon-nitrogen hydrolase
YP_007239464.1	PFAM: Flavin reductase like domain
YP_007239465.1	PFAM: Protein of Unknown function (DUF2784)
YP_007239466.1	PFAM: Predicted membrane protein (DUF2238)
YP_007239467.1	PFAM: Endonuclease I
YP_007239468.1	PFAM: EamA-like transporter family; TIGRFAM: Carboxylate/Amino Acid/Amine Transporter
YP_007239469.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_007239470.1	PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase, yeast type
YP_007239473.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent copper receptor
YP_007239474.1	PFAM: Mechanosensitive ion channel
YP_007239475.1	PFAM: Isochorismatase family
YP_007239476.1	PFAM: Peptidase family M23
YP_007239477.1	PFAM: Exonuclease VII, large subunit; OB-fold nucleic acid binding domain; TIGRFAM: exodeoxyribonuclease VII, large subunit
YP_007239479.1	PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase
YP_007239480.1	PFAM: Glutamine amidotransferase class-I; GMP synthase C terminal domain; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit
YP_007239481.1	PFAM: Multicopper oxidase
YP_007239482.1	PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region
YP_007239483.1	PFAM: ABC transporter; TOBE domain
YP_007239484.1	PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase
YP_007239485.1	PFAM: Glutaredoxin; TIGRFAM: monothiol glutaredoxin, Grx4 family
YP_007239486.1	PFAM: VanZ like family
YP_007239487.1	PFAM: Aminotransferase class I and II
YP_007239488.1	PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit
YP_007239489.1	PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family
YP_007239490.1	PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family
YP_007239492.1	PFAM: impB/mucB/samB family C-terminal; IMS family HHH motif; impB/mucB/samB family
YP_007239493.1	PFAM: META domain
YP_007239495.1	PFAM: Dienelactone hydrolase family
YP_007239496.1	PFAM: ABC transporter
YP_007239497.1	PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter
YP_007239498.1	PFAM: Branched-chain amino acid transport system / permease component; Domain of unknown function (DUF3382)
YP_007239499.1	PFAM: Branched-chain amino acid transport system / permease component
YP_007239500.1	PFAM: Receptor family ligand binding region
YP_007239501.1	PFAM: Protein of unknown function (DUF2288)
YP_007239502.1	PFAM: Peptidase family M48
YP_007239504.1	PFAM: CHASE2 domain
YP_007239505.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphonate ABC transporter, permease protein PhnE
YP_007239506.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphonate ABC transporter, permease protein PhnE
YP_007239507.1	PFAM: ABC transporter
YP_007239508.1	PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein
YP_007239509.1	PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP
YP_007239510.1	PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase
YP_007239511.1	PFAM: Xylose isomerase-like TIM barrel
YP_007239512.1	PFAM: Major Facilitator Superfamily
YP_007239513.1	PFAM: Hsp70 protein
YP_007239514.1	PFAM: CHAD domain
YP_007239515.1	PFAM: Helicase conserved C-terminal domain; RNA polymerase recycling family C-terminal; SNF2 family N-terminal domain
YP_007239520.1	PFAM: Domain of unknown function (DUF3372); Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Bacterial pullanase-associated domain; TIGRFAM: alpha-1,6-glucosidases, pullulanase-type
YP_007239521.1	PFAM: MaoC like domain
YP_007239522.1	PFAM: AMP-binding enzyme
YP_007239523.1	PFAM: AMP-binding enzyme
YP_007239524.1	PFAM: Cache domain; HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_007239525.1	PFAM: Cache domain; HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_007239526.1	PFAM: PA domain; Peptidase family M28
YP_007239527.1	PFAM: Helicase conserved C-terminal domain; Helicase associated domain (HA2); Domain of unknown function (DUF3418); DEAD/DEAH box helicase; Domain of unknown function (DUF1605); TIGRFAM: ATP-dependent helicase HrpA
YP_007239528.1	TIGRFAM: rarD protein
YP_007239529.1	PFAM: FHA domain
YP_007239530.1	PFAM: Protein kinase domain
YP_007239531.1	PFAM: Stage II sporulation protein E (SpoIIE)
YP_007239532.1	PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding
YP_007239533.1	PFAM: FAD dependent oxidoreductase
YP_007239534.1	PFAM: FtsJ-like methyltransferase; TIGRFAM: cell division protein FtsJ
YP_007239535.1	PFAM: Cupin domain; TIGRFAM: putative allantoin catabolism protein
YP_007239536.1	PFAM: alpha/beta hydrolase fold
YP_007239537.1	PFAM: Metallo-beta-lactamase superfamily; TIGRFAM: ribonuclease Z
YP_007239539.1	PFAM: Protein of unknown function (DUF1624)
YP_007239540.1	PFAM: 3-demethylubiquinone-9 3-methyltransferase
YP_007239541.1	PFAM: YCII-related domain
YP_007239542.1	PFAM: CAAX amino terminal protease family
YP_007239544.1	PFAM: MOSC domain; 3-alpha domain
YP_007239545.1	PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain
YP_007239546.1	PFAM: HIT domain
YP_007239547.1	PFAM: NMT1/THI5 like
YP_007239548.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_007239549.1	PFAM: ABC transporter
YP_007239550.1	PFAM: Protein of unknown function (DUF445)
YP_007239552.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_007239555.1	PFAM: LysE type translocator
YP_007239556.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain
YP_007239559.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_007239560.1	PFAM: Serine hydrolase (FSH1)
YP_007239561.1	PFAM: Major Facilitator Superfamily
YP_007239562.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_007239567.1	PFAM: Citrate transporter; TrkA-C domain
YP_007239568.1	PFAM: Putative lysophospholipase
YP_007239569.1	PFAM: Transcription elongation factor, GreA/GreB, C-term
YP_007239570.1	PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase III, bacteria and conjugative plasmid
YP_007239571.1	PFAM: Protein of unknown function (DUF3079)
YP_007239572.1	PFAM: Sodium:dicarboxylate symporter family
YP_007239573.1	PFAM: Domain of unknown function (DUF1992)
YP_007239574.1	PFAM: Protein of unknown function (DUF541)
YP_007239576.1	PFAM: Branched-chain amino acid transport system / permease component
YP_007239577.1	PFAM: Branched-chain amino acid transport system / permease component
YP_007239578.1	PFAM: ABC transporter
YP_007239579.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-type transcriptional regulator N-terminus
YP_007239580.1	PFAM: Carboxymuconolactone decarboxylase family
YP_007239581.1	PFAM: short chain dehydrogenase
YP_007239582.1	PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region
YP_007239583.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_007239584.1	PFAM: ABC transporter
YP_007239585.1	PFAM: NMT1/THI5 like
YP_007239586.1	PFAM: Alpha/Beta hydrolase family of unknown function (DUF1234)
YP_007239587.1	PFAM: 2OG-Fe(II) oxygenase superfamily
YP_007239588.1	PFAM: LysE type translocator
YP_007239589.1	PFAM: AsnC family
YP_007239590.1	PFAM: Methyltransferase domain
YP_007239592.1	PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_007239593.1	PFAM: KaiC
YP_007239594.1	PFAM: ABC1 family
YP_007239595.1	PFAM: short chain dehydrogenase
YP_007239597.1	PFAM: Protein of unknown function (DUF3047)
YP_007239598.1	PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase
YP_007239600.1	PFAM: Restriction endonuclease
YP_007239602.1	PFAM: Transposase DDE domain; Transposase domain (DUF772)
YP_007239603.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_007239604.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_007239605.1	PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain
YP_007239606.1	PFAM: Carbohydrate-selective porin, OprB family
YP_007239607.1	PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family
YP_007239609.1	PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain)
YP_007239610.1	PFAM: Biotin-requiring enzyme
YP_007239611.1	PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain
YP_007239612.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase
YP_007239613.1	PFAM: Dehydrogenase E1 component
YP_007239614.1	PFAM: GMC oxidoreductase
YP_007239616.1	PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain
YP_007239618.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_007239619.1	PFAM: S-adenosylmethionine-dependent methyltransferase
YP_007239620.1	PFAM: Domain of unknown function (DUF305)
YP_007239621.1	PFAM: Protein of unknown function (DUF785)
YP_007239622.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_007239623.1	PFAM: Bacterial regulatory proteins, tetR family; YcdC-like protein, C-terminal region
YP_007239624.1	PFAM: Nucleoside-specific channel-forming protein, Tsx
YP_007239625.1	PFAM: Curlin associated repeat
YP_007239626.1	PFAM: Curlin associated repeat
YP_007239627.1	PFAM: Curli production assembly/transport component CsgG
YP_007239628.1	PFAM: Curli production assembly/transport component CsgF
YP_007239629.1	PFAM: Curli assembly protein CsgE
YP_007239630.1	PFAM: Bacterial regulatory proteins, luxR family
YP_007239631.1	PFAM: LysE type translocator; TIGRFAM: The Resistance to Homoserine/Threonine (RhtB) Family protein
YP_007239632.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_007239633.1	PFAM: short chain dehydrogenase
YP_007239634.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_007239635.1	PFAM: Exopolysaccharide synthesis, ExoD
YP_007239636.1	PFAM: Cobalamin-independent synthase, N-terminal domain; Cobalamin-independent synthase, Catalytic domain; TIGRFAM: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
YP_007239637.1	PFAM: FAD dependent oxidoreductase
YP_007239638.1	PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein
YP_007239639.1	PFAM: GGDEF domain; MASE2 domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; manually curated
YP_007239640.1	PFAM: Protein of unknown function (DUF2892)
YP_007239641.1	PFAM: Ankyrin repeat
YP_007239644.1	PFAM: Cytochrome c
YP_007239645.1	PFAM: Cytochrome c
YP_007239646.1	PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III
YP_007239647.1	PFAM: Fe-S metabolism associated domain
YP_007239648.1	PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufS subfamily
YP_007239649.1	TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
YP_007239650.1	PFAM: ArsC family; TIGRFAM: transcriptional regulator, Spx/MgsR family
YP_007239651.1	PFAM: Thioredoxin
YP_007239654.1	PFAM: Aminotransferase class I and II; TIGRFAM: succinyldiaminopimelate transaminase
YP_007239656.1	PFAM: Protein of unknown function (DUF3108)
YP_007239657.1	PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent
YP_007239658.1	PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase
YP_007239659.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2066)
YP_007239660.1	PFAM: Domain of unknown function DUF20
YP_007239661.1	PFAM: Bacterial dnaA protein; TIGRFAM: DnaA regulatory inactivator Hda
YP_007239662.1	PFAM: Predicted membrane protein (DUF2069)
YP_007239663.1	PFAM: NADPH-dependent FMN reductase; TIGRFAM: NAD(P)H:quinone oxidoreductase, type IV
YP_007239664.1	PFAM: ArsC family; TIGRFAM: arsenate reductase (glutaredoxin)
YP_007239665.1	PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN)
YP_007239668.1	PFAM: AhpC/TSA family
YP_007239669.1	PFAM: Transglycosylase SLT domain
YP_007239671.1	PFAM: YbaK / prolyl-tRNA synthetases associated domain; Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family II
YP_007239672.1	PFAM: outer membrane porin, OprD family
YP_007239673.1	PFAM: HIT domain
YP_007239674.1	PFAM: SlyX
YP_007239675.1	PFAM: 'Cold-shock' DNA-binding domain
YP_007239676.1	PFAM: Ferritin-like domain
YP_007239677.1	PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type
YP_007239678.1	PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family
YP_007239679.1	PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC
YP_007239680.1	PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit
YP_007239681.1	PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit
YP_007239682.1	PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; tol-pal system-associated acyl-CoA thioesterase
YP_007239683.1	PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: TolQ protein; TC 2.C.1.2.1
YP_007239684.1	PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TolR protein; TC 2.C.1.2.1
YP_007239685.1	PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TolA protein; TonB family C-terminal domain; TC 2.C.1.2.1
YP_007239686.1	PFAM: WD40-like Beta Propeller Repeat; TolB amino-terminal domain; TIGRFAM: tol-pal system beta propeller repeat protein TolB
YP_007239687.1	PFAM: OmpA family; TIGRFAM: peptidoglycan-associated lipoprotein
YP_007239688.1	TIGRFAM: tol-pal system protein YbgF
YP_007239689.1	PFAM: Radical SAM superfamily
YP_007239690.1	PFAM: ExsB; TIGRFAM: queuosine biosynthesis protein QueC
YP_007239691.1	PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain; Citrate lyase, alpha subunit (CitF); TIGRFAM: succinate CoA transferases
YP_007239692.1	PFAM: Quinolinate synthetase A protein; TIGRFAM: quinolinate synthetase complex, A subunit
YP_007239693.1	PFAM: Peptidase family M48
YP_007239694.1	PFAM: SirA-like protein
YP_007239695.1	PFAM: Domain of unknown function DUF20
YP_007239696.1	PFAM: AhpC/TSA family
YP_007239698.1	PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase
YP_007239699.1	PFAM: NlpB/DapX lipoprotein
YP_007239700.1	PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase
YP_007239701.1	PFAM: DNA polymerase family B; DNA polymerase family B, exonuclease domain
YP_007239703.1	PFAM: Protein of unknown function (DUF1318)
YP_007239705.1	PFAM: Dicarboxylate transport
YP_007239706.1	PFAM: Sel1 repeat
YP_007239707.1	PFAM: RmuC family
YP_007239708.1	PFAM: MgtC family
YP_007239709.1	PFAM: Sodium:solute symporter family; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain
YP_007239711.1	PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC
YP_007239712.1	PFAM: Branched-chain amino acid transport protein (AzlD)
YP_007239714.1	PFAM: Putative exonuclease, RdgC
YP_007239715.1	PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
YP_007239716.1	PFAM: Ferritin-like domain; TIGRFAM: bacterioferritin
YP_007239717.1	PFAM: BFD-like [2Fe-2S] binding domain
YP_007239718.1	PFAM: YaeQ protein
YP_007239719.1	PFAM: Natural resistance-associated macrophage protein
YP_007239720.1	PFAM: Allophanate hydrolase subunit 2; TIGRFAM: biotin-dependent carboxylase uncharacterized domain
YP_007239721.1	PFAM: Allophanate hydrolase subunit 1; TIGRFAM: TIGR00370 family protein
YP_007239722.1	PFAM: LamB/YcsF family
YP_007239724.1	PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ
YP_007239725.1	PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain
YP_007239726.1	PFAM: NADH:flavin oxidoreductase / NADH oxidase family
YP_007239727.1	PFAM: Protein of unknown function (DUF533)
YP_007239728.1	PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2; manually curated
YP_007239729.1	PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial
YP_007239730.1	PFAM: Domain of unknown function (DUF1704); TIGRFAM: conserved hypothetical protein
YP_007239731.1	PFAM: Uncharacterised protein family UPF0005
YP_007239732.1	PFAM: Protein of unknown function DUF124; TIGRFAM: TIGR00266 family protein
YP_007239734.1	PFAM: OmpA family
YP_007239737.1	PFAM: Phosphoenolpyruvate carboxylase
YP_007239738.1	PFAM: Adenylate kinase, active site lid; Adenylate kinase; TIGRFAM: adenylate kinases
YP_007239739.1	PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ
YP_007239741.1	PFAM: Protein of unknown function DUF72; manually curated; non-canonical start codon
YP_007239742.1	PFAM: Extensin-like protein C-terminus
YP_007239743.1	PFAM: Protein of unknown function (DUF548)
YP_007239744.1	PFAM: Bacterial regulatory proteins, tetR family
YP_007239745.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; manually curated
YP_007239746.1	PFAM: AcrB/AcrD/AcrF family
YP_007239747.1	PFAM: Bacterial regulatory proteins, tetR family
YP_007239749.1	PFAM: GGDEF domain; GAF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain
YP_007239750.1	PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family
YP_007239751.1	PFAM: Ubp3 associated protein Bre5; TIGRFAM: cytochrome c oxidase accessory protein FixG
YP_007239752.1	PFAM: LrgA family
YP_007239753.1	PFAM: LrgB-like family; TIGRFAM: TIGR00659 family protein
YP_007239754.1	PFAM: Phenazine biosynthesis-like protein; TIGRFAM: phenazine biosynthesis protein PhzF family
YP_007239755.1	PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain
YP_007239756.1	PFAM: Periplasmic glucan biosynthesis protein, MdoG
YP_007239757.1	PFAM: Glycosyl transferase family 2
YP_007239758.1	PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase
YP_007239759.1	PFAM: Pirin
YP_007239760.1	PFAM: NADPH-dependent FMN reductase; TIGRFAM: NAD(P)H:quinone oxidoreductase, type IV
YP_007239761.1	PFAM: Acetyltransferase (GNAT) family
YP_007239762.1	PFAM: Protein of unknown function (DUF3087)
YP_007239763.1	PFAM: outer membrane porin, OprD family
YP_007239764.1	PFAM: Sugar (and other) transporter
YP_007239765.1	PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase
YP_007239766.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_007239768.1	PFAM: Copper resistance protein B precursor (CopB)
YP_007239770.1	PFAM: Multicopper oxidase; TIGRFAM: copper-resistance protein, CopA family; Tat (twin-arginine translocation) pathway signal sequence
YP_007239774.1	PFAM: Protein of unknown function, DUF
YP_007239775.1	PFAM: Heavy-metal-associated domain
YP_007239776.1	PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper ion binding protein; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_007239777.1	PFAM: Protein of unknown function (DUF2933)
YP_007239778.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: heavy metal response regulator
YP_007239779.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: heavy metal sensor kinase
YP_007239781.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_007239782.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_007239783.1	PFAM: Thioredoxin; Disulphide bond corrector protein DsbC; Cytochrome C biogenesis protein transmembrane region
YP_007239784.1	PFAM: Redoxin
YP_007239787.1	PFAM: Acetyltransferase (GNAT) family
YP_007239788.1	PFAM: Acyltransferase; TIGRFAM: glycerol-3-phosphate O-acyltransferase
YP_007239791.1	PFAM: Penicillin binding protein transpeptidase domain
YP_007239792.1	PFAM: ABC transporter
YP_007239794.1	PFAM: ABC-type uncharacterized transport system
YP_007239795.1	PFAM: 'Cold-shock' DNA-binding domain
YP_007239797.1	PFAM: Methyltransferase domain
YP_007239798.1	PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: succinyl-diaminopimelate desuccinylase, proteobacterial clade
YP_007239799.1	PFAM: ThiF family
YP_007239800.1	PFAM: Phosphate-selective porin O and P
YP_007239801.1	PFAM: Protein of unknown function, DUF482
YP_007239803.1	PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
YP_007239804.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_007239807.1	PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase
YP_007239810.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_007239811.1	PFAM: Domain of unknown function (DUF1127)
YP_007239812.1	PFAM: Sulfite exporter TauE/SafE
YP_007239813.1	PFAM: Protein of unknown function (DUF3365)
YP_007239814.1	PFAM: Protein of unknown function (DUF752); FAD dependent oxidoreductase; TIGRFAM: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain
YP_007239815.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain
YP_007239816.1	PFAM: UPF0126 domain
YP_007239817.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; TIGRFAM: transcriptional regulator, ArgP family
YP_007239818.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthases; cysteine synthase B
YP_007239819.1	PFAM: TRAM domain; tRNA (Uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA
YP_007239820.1	PFAM: ACT domain; TGS domain; Region found in RelA / SpoT proteins; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family
YP_007239821.1	PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein
YP_007239822.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2058)
YP_007239824.1	PFAM: Erythromycin esterase
YP_007239826.1	PFAM: Calcineurin-like phosphoesterase
YP_007239827.1	PFAM: Helicase conserved C-terminal domain; DEAD/H associated; DEAD/DEAH box helicase
YP_007239828.1	PFAM: ATP dependent DNA ligase domain; DNA ligase N terminus; ATP dependent DNA ligase C terminal region
YP_007239831.1	PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain
YP_007239832.1	PFAM: Protein of unknown function (DUF2803)
YP_007239833.1	PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd)
YP_007239834.1	PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I
YP_007239835.1	PFAM: Na(+)-translocating NADH-quinone reductase subunit A (NQRA); NQRA C-terminal domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit
YP_007239836.1	PFAM: NQR2, RnfD, RnfE family; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit
YP_007239837.1	PFAM: FMN-binding domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit
YP_007239838.1	PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit
YP_007239839.1	PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit
YP_007239840.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit
YP_007239841.1	PFAM: ApbE family
YP_007239842.1	PFAM: Protein of unknown function (DUF539)
YP_007239843.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
YP_007239844.1	PFAM: Glycerophosphoryl diester phosphodiesterase family
YP_007239846.1	PFAM: PilZ domain
YP_007239847.1	PFAM: Predicted permease; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family
YP_007239848.1	PFAM: ABC transporter; TIGRFAM: lipoprotein releasing system, ATP-binding protein
YP_007239849.1	PFAM: Predicted permease; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family
YP_007239850.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2062)
YP_007239851.1	PFAM: Competence protein; Metallo-beta-lactamase superfamily; TIGRFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2
YP_007239852.1	PFAM: MotA/TolQ/ExbB proton channel family; manually curated
YP_007239853.1	PFAM: Biopolymer transport protein ExbD/TolR
YP_007239854.1	PFAM: Tetraacyldisaccharide-1-P 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase
YP_007239855.1	PFAM: Trm112p-like protein
YP_007239856.1	PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase
YP_007239857.1	PFAM: Low molecular weight phosphotyrosine protein phosphatase
YP_007239858.1	PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase
YP_007239859.1	PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family
YP_007239860.1	PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family
YP_007239861.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
YP_007239862.1	PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type
YP_007239863.1	PFAM: Maf-like protein; TIGRFAM: MAF protein
YP_007239864.1	PFAM: Uncharacterized ACR, COG1399; manually curated
YP_007239865.1	PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32
YP_007239866.1	PFAM: Fatty acid synthesis protein; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX
YP_007239867.1	PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase
YP_007239868.1	PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase
YP_007239869.1	PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein
YP_007239870.1	PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II
YP_007239871.1	PFAM: Aminotransferase class IV; TIGRFAM: aminodeoxychorismate lyase
YP_007239872.1	PFAM: YceG-like family; TIGRFAM: conserved hypothetical protein, YceG family
YP_007239873.1	PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase
YP_007239874.1	PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: DNA polymerase III, delta' subunit
YP_007239875.1	PFAM: PilZ domain
YP_007239876.1	PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family
YP_007239877.1	PFAM: Amino acid permease
YP_007239878.1	PFAM: Aminotransferase class-V
YP_007239879.1	PFAM: Bacterial regulatory proteins, tetR family
YP_007239880.1	PFAM: Radical SAM superfamily
YP_007239882.1	PFAM: Protein of unknown function (DUF1285)
YP_007239883.1	PFAM: Electron transfer flavoprotein-ubiquinone oxidoreductase; Thi4 family; FAD dependent oxidoreductase
YP_007239884.1	PFAM: Electron transfer flavoprotein domain
YP_007239885.1	PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain
YP_007239886.1	PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_007239888.1	PFAM: OmpA family
YP_007239889.1	PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family
YP_007239891.1	PFAM: EAL domain; GGDEF domain; CHASE4 domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain
YP_007239892.1	PFAM: Protein of unknown function (DUF2897)
YP_007239893.1	PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 1
YP_007239894.1	PFAM: Zinc-binding dehydrogenase
YP_007239895.1	PFAM: short chain dehydrogenase
YP_007239896.1	PFAM: Benzoate membrane transport protein; TIGRFAM: benzoate transporter
YP_007239897.1	PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE
YP_007239898.1	PFAM: Secretory protein of YscJ/FliF family; Flagellar M-ring protein C-terminal; TIGRFAM: flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF)
YP_007239899.1	PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG
YP_007239900.1	PFAM: Flagellar assembly protein FliH
YP_007239901.1	PFAM: ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family; flagellar protein export ATPase FliI
YP_007239902.1	PFAM: Flagellar FliJ protein; TIGRFAM: flagellar export protein FliJ
YP_007239903.1	PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_007239904.1	PFAM: Response regulator receiver domain; Stage II sporulation protein E (SpoIIE)
YP_007239905.1	PFAM: Hpt domain
YP_007239906.1	PFAM: Flagellar hook-length control protein FliK
YP_007239907.1	PFAM: Flagellar basal body-associated protein FliL
YP_007239908.1	PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM
YP_007239909.1	PFAM: Surface presentation of antigens (SPOA); TIGRFAM: flagellar motor switch protein FliN
YP_007239910.1	PFAM: Flagellar biosynthesis protein, FliO; TIGRFAM: flagellar biosynthetic protein FliO
YP_007239911.1	PFAM: FliP family; TIGRFAM: flagellar biosynthetic protein FliP
YP_007239912.1	PFAM: Bacterial export proteins, family 3; TIGRFAM: flagellar biosynthetic protein FliQ
YP_007239913.1	PFAM: Bacterial export proteins, family 1; TIGRFAM: flagellar biosynthetic protein FliR
YP_007239914.1	PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flagellar biosynthetic protein FlhB
YP_007239915.1	PFAM: Copper/zinc superoxide dismutase (SODC)
YP_007239916.1	PFAM: FHIPEP family; TIGRFAM: flagellar biosynthesis protein FlhA
YP_007239917.1	PFAM: SRP54-type protein, GTPase domain; TIGRFAM: flagellar biosynthetic protein FlhF
YP_007239918.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_007239919.1	PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family
YP_007239920.1	PFAM: Response regulator receiver domain
YP_007239921.1	PFAM: Chemotaxis phosphatase, CheZ
YP_007239922.1	PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain
YP_007239923.1	PFAM: CheB methylesterase; Response regulator receiver domain
YP_007239924.1	PFAM: MotA/TolQ/ExbB proton channel family
YP_007239925.1	PFAM: OmpA family
YP_007239926.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_007239927.1	PFAM: CheW-like domain
YP_007239928.1	PFAM: CheW-like domain
YP_007239929.1	PFAM: Protein of unknown function (DUF2802)
YP_007239930.1	PFAM: Rhodanese-like domain
YP_007239931.1	PFAM: FlhB HrpN YscU SpaS Family
YP_007239932.1	PFAM: Flagellar hook-length control protein FliK
YP_007239933.1	PFAM: ABC transporter; TIGRFAM: heme ABC exporter, ATP-binding protein CcmA
YP_007239934.1	PFAM: CcmB protein; TIGRFAM: heme exporter protein CcmB
YP_007239935.1	PFAM: Cytochrome C assembly protein; TIGRFAM: heme exporter protein CcmC
YP_007239936.1	PFAM: Heme exporter protein D (CcmD); TIGRFAM: heme exporter protein CcmD
YP_007239937.1	PFAM: CcmE
YP_007239938.1	PFAM: Cytochrome C assembly protein; TIGRFAM: c-type cytochrome biogenesis protein CcmF; cytochrome c nitrate reductase biogenesis protein NrfE
YP_007239939.1	PFAM: Redoxin; TIGRFAM: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily
YP_007239940.1	PFAM: Cytochrome C biogenesis protein
YP_007239941.1	PFAM: Tetratricopeptide repeat; TIGRFAM: cytochrome c-type biogenesis protein CcmI
YP_007239944.1	PFAM: Flagellar regulatory protein FleQ; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain
YP_007239945.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_007239946.1	PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain
YP_007239947.1	PFAM: Thiopurine S-methyltransferase (TPMT); TIGRFAM: thiopurine S-methyltransferase, Se/Te detoxification family
YP_007239948.1	PFAM: Protein of unknown function (DUF2959)
YP_007239949.1	PFAM: Peptidase family M48
YP_007239951.1	PFAM: Aminotransferase class I and II
YP_007239952.1	PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase
YP_007239953.1	PFAM: Glutathione peroxidase
YP_007239954.1	PFAM: Protein of unknown function (DUF815)
YP_007239955.1	PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain
YP_007239958.1	PFAM: Uncharacterised BCR, COG1937
YP_007239959.1	PFAM: Bacterial regulatory protein, arsR family
YP_007239960.1	PFAM: YeeE/YedE family (DUF395)
YP_007239961.1	PFAM: YeeE/YedE family (DUF395)
YP_007239962.1	PFAM: Protein of unknown function (DUF2892)
YP_007239963.1	PFAM: Rhodanese-like domain
YP_007239964.1	PFAM: Sulfate transporter family; STAS domain; TIGRFAM: high affinity sulphate transporter 1
YP_007239965.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; Putative phosphatase (DUF442); TIGRFAM: TIGR01244 family protein
YP_007239966.1	PFAM: Metallo-beta-lactamase superfamily
YP_007239967.1	PFAM: ABC transporter
YP_007239968.1	PFAM: Predicted permease
YP_007239969.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_007239970.1	PFAM: ZIP Zinc transporter
YP_007239971.1	PFAM: OmpA family
YP_007239972.1	PFAM: MotA/TolQ/ExbB proton channel family
YP_007239973.1	PFAM: Flavin containing amine oxidoreductase
YP_007239974.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2331); TIGRFAM: conserved hypothetical protein, PP_1857 family
YP_007239975.1	PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P
YP_007239976.1	PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter
YP_007239977.1	PFAM: Class-II DAHP synthetase family; TIGRFAM: 3-deoxy-7-phosphoheptulonate synthase, class II
YP_007239978.1	PFAM: Spermine/spermidine synthase
YP_007239979.1	PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_007239980.1	PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase
YP_007239981.1	PFAM: Bacterial DNA-binding protein; TIGRFAM: integration host factor, beta subunit
YP_007239982.1	PFAM: Chain length determinant protein
YP_007239983.1	PFAM: Chain length determinant protein
YP_007239984.1	PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain
YP_007239985.1	PFAM: Polysaccharide biosynthesis protein
YP_007239986.1	PFAM: Polysaccharide biosynthesis protein; TIGRFAM: UDP-N-acetylglucosamine 4,6-dehydratase
YP_007239987.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase
YP_007239988.1	PFAM: Cytidylyltransferase; TIGRFAM: pseudaminic acid CMP-transferase
YP_007239989.1	PFAM: Glycosyltransferase family 28 C-terminal domain; TIGRFAM: pseudaminic acid biosynthesis-associated protein PseG
YP_007239990.1	PFAM: Acetyltransferase (GNAT) family; TIGRFAM: pseudaminic acid biosynthesis N-acetyl transferase
YP_007239991.1	PFAM: SAF domain; NeuB family; TIGRFAM: pseudaminic acid synthase
YP_007239994.1	PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: GDP-mannose 4,6-dehydratase
YP_007239995.1	PFAM: NAD dependent epimerase/dehydratase family
YP_007239996.1	PFAM: NUDIX domain
YP_007239997.1	PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
YP_007239998.1	PFAM: Glycosyl transferase family 2
YP_007239999.1	PFAM: NAD dependent epimerase/dehydratase family
YP_007240000.1	PFAM: Bacterial sugar transferase
YP_007240001.1	PFAM: Polysaccharide biosynthesis protein
YP_007240003.1	PFAM: 4'-phosphopantetheinyl transferase superfamily
YP_007240004.1	PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate:AMP phosphotransferase
YP_007240005.1	PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases
YP_007240006.1	PFAM: Polysaccharide biosynthesis/export protein
YP_007240007.1	PFAM: Glycosyl transferase WecB/TagA/CpsF family; TIGRFAM: bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family
YP_007240008.1	PFAM: Glycosyl transferase family 2
YP_007240010.1	PFAM: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term; Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus
YP_007240011.1	PFAM: Polysaccharide biosynthesis protein
YP_007240012.1	PFAM: Polysaccharide pyruvyl transferase
YP_007240013.1	PFAM: Cellulase (glycosyl hydrolase family 5)
YP_007240014.1	PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; exopolysaccharide transport protein family
YP_007240015.1	PFAM: Low molecular weight phosphotyrosine protein phosphatase
YP_007240016.1	PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
YP_007240017.1	PFAM: Diacylglycerol kinase catalytic domain; TIGRFAM: lipid kinase, YegS/Rv2252/BmrU family; lipid kinase YegS
YP_007240018.1	PFAM: CheW-like domain; Response regulator receiver domain
YP_007240019.1	PFAM: MOSC N-terminal beta barrel domain; MOSC domain
YP_007240020.1	PFAM: Transglycosylase SLT domain
YP_007240021.1	PFAM: ABC transporter
YP_007240023.1	PFAM: Universal stress protein family
YP_007240025.1	PFAM: Glutamine amidotransferases class-II
YP_007240026.1	PFAM: Protein of unknown function (DUF2937)
YP_007240027.1	PFAM: VWA domain containing CoxE-like protein
YP_007240028.1	PFAM: Glutathione-dependent formaldehyde-activating enzyme
YP_007240029.1	PFAM: ATPase family associated with various cellular activities (AAA)
YP_007240030.1	PFAM: Domain of Unknown Function (DUF748)
YP_007240031.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases
YP_007240032.1	PFAM: EamA-like transporter family
YP_007240033.1	PFAM: Isocitrate dehydrogenase kinase/phosphatase (AceK)
YP_007240035.1	PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain
YP_007240036.1	PFAM: DTW domain
YP_007240037.1	PFAM: HlyD family secretion protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family
YP_007240038.1	PFAM: Hemolysin-type calcium-binding repeat (2 copies); TIGRFAM: type 1 secretion C-terminal target domain (VC_A0849 subclass); VCBS repeat
YP_007240040.1	PFAM: EAL domain; HAMP domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_007240041.1	PFAM: Bacterial protein of unknown function (DUF920)
YP_007240042.1	PFAM: Protein of unknown function (DUF454)
YP_007240044.1	PFAM: Uncharacterised protein family (UPF0149); TIGRFAM: yecA family protein
YP_007240045.1	PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family
YP_007240046.1	PFAM: MarR family
YP_007240047.1	PFAM: Surface antigen variable number repeat; Patatin-like phospholipase; Surface antigen
YP_007240048.1	PFAM: Rdx family; TIGRFAM: selT/selW/selH selenoprotein domain
YP_007240049.1	PFAM: EamA-like transporter family
YP_007240050.1	PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_007240051.1	PFAM: Adenylate and Guanylate cyclase catalytic domain; MASE2 domain
YP_007240052.1	PFAM: Protein of unknown function (DUF962)
YP_007240053.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_007240054.1	PFAM: Protein of unknown function (DUF808)
YP_007240055.1	PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family
YP_007240056.1	PFAM: Uncharacterised protein family (UPF0153); manually curated
YP_007240057.1	PFAM: Nitroreductase family
YP_007240058.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_007240060.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_007240062.1	PFAM: YCII-related domain
YP_007240063.1	PFAM: PHP domain
YP_007240064.1	PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein
YP_007240065.1	PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase
YP_007240066.1	PFAM: ScpA/B protein
YP_007240067.1	PFAM: Putative transcriptional regulators (Ypuh-like); TIGRFAM: segregation and condensation protein B
YP_007240068.1	PFAM: Dehydratase family; TIGRFAM: 6-phosphogluconate dehydratase
YP_007240069.1	PFAM: Glucokinase; TIGRFAM: glucokinase, proteobacterial type
YP_007240070.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_007240071.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_007240072.1	PFAM: Bacterial extracellular solute-binding protein
YP_007240073.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_007240074.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_007240075.1	PFAM: ABC transporter; TOBE domain
YP_007240076.1	PFAM: LamB porin
YP_007240079.1	PFAM: Chorismate synthase; TIGRFAM: chorismate synthase
YP_007240080.1	PFAM: Nucleoside H+ symporter
YP_007240081.1	PFAM: ARD/ARD' family
YP_007240084.1	PFAM: Phosphoglycerate mutase family
YP_007240085.1	PFAM: AlkA N-terminal domain; HhH-GPD superfamily base excision DNA repair protein
YP_007240086.1	PFAM: Spermine/spermidine synthase; TIGRFAM: spermidine synthase
YP_007240087.1	PFAM: Protein of unknown function (DUF1260)
YP_007240088.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_007240089.1	PFAM: Sulfite exporter TauE/SafE
YP_007240090.1	PFAM: Chromate transporter; TIGRFAM: chromate transporter, chromate ion transporter (CHR) family
YP_007240091.1	PFAM: Domain of unknown function (DUF1853)
YP_007240092.1	PFAM: ATP-NAD kinase
YP_007240093.1	PFAM: Calcineurin-like phosphoesterase
YP_007240094.1	PFAM: Rhomboid family
YP_007240095.1	PFAM: Protein of unknown function (DUF1315)
YP_007240096.1	PFAM: Protein of unknown function (DUF2797)
YP_007240097.1	PFAM: Domain of unknown function (DUF3458); Peptidase family M1; TIGRFAM: aminopeptidase N, Escherichia coli type
YP_007240098.1	PFAM: BNR/Asp-box repeat
YP_007240099.1	PFAM: Patched family; MMPL family
YP_007240100.1	PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase
YP_007240101.1	PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; BFD-like [2Fe-2S] binding domain; Molybdopterin oxidoreductase Fe4S4 domain
YP_007240102.1	PFAM: Rieske [2Fe-2S] domain; TIGRFAM: nitrite reductase [NAD(P)H], small subunit
YP_007240103.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; Nitrite and sulphite reductase 4Fe-4S domain; BFD-like [2Fe-2S] binding domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: nitrite reductase [NAD(P)H], large subunit
YP_007240105.1	PFAM: Protein kinase domain
YP_007240106.1	PFAM: Major Facilitator Superfamily; TIGRFAM: nitrite extrusion protein (nitrite facilitator)
YP_007240107.1	PFAM: pfkB family carbohydrate kinase; TIGRFAM: hexose kinase, 1-phosphofructokinase family
YP_007240110.1	PFAM: Response regulator receiver domain; ANTAR domain
YP_007240113.1	PFAM: Tetratricopeptide repeat
YP_007240114.1	PFAM: von Willebrand factor type A domain
YP_007240116.1	PFAM: Protein of unknown function DUF58
YP_007240117.1	PFAM: ATPase family associated with various cellular activities (AAA)
YP_007240118.1	PFAM: Bacterial NAD-glutamate dehydrogenase
YP_007240120.1	PFAM: Protein of unknown function (DUF2835)
YP_007240121.1	PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase, subfamily 2
YP_007240122.1	PFAM: Ribosome modulation factor
YP_007240123.1	PFAM: Putative RNA methylase family UPF0020; S-adenosylmethionine-dependent methyltransferase; THUMP domain
YP_007240124.1	PFAM: D-Ala-D-Ala carboxypeptidase 3 (S13) family; TIGRFAM: D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family
YP_007240125.1	PFAM: Protein with unknown function (DUF469)
YP_007240127.1	PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative
YP_007240129.1	PFAM: Protein of unknown function (DUF1469)
YP_007240130.1	PFAM: Bacterial protein of unknown function (DUF883)
YP_007240131.1	PFAM: outer membrane porin, OprD family
YP_007240132.1	PFAM: Glutaredoxin-like domain (DUF836)
YP_007240133.1	PFAM: Bacterial protein of unknown function (DUF903)
YP_007240134.1	TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial
YP_007240135.1	PFAM: Acyltransferase family
YP_007240136.1	PFAM: Peptidase inhibitor I78 family
YP_007240138.1	PFAM: Peptidase C39 family; manually curated
YP_007240139.1	PFAM: FAD dependent oxidoreductase
YP_007240140.1	PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TGS domain; TIGRFAM: threonyl-tRNA synthetase
YP_007240141.1	PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3; manually curated
YP_007240142.1	PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20
YP_007240143.1	PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit
YP_007240144.1	PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial
YP_007240145.1	PFAM: Bacterial DNA-binding protein; TIGRFAM: integration host factor, alpha subunit
YP_007240146.1	PFAM: MerR family regulatory protein
YP_007240147.1	PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc)
YP_007240148.1	PFAM: impB/mucB/samB family
YP_007240149.1	manually curated
YP_007240150.1	PFAM: Initiation factor 2 subunit family; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized proteins; S-methyl-5-thioribose-1-phosphate isomerase
YP_007240151.1	PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit
YP_007240152.1	PFAM: Aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase
YP_007240153.1	PFAM: Prephenate dehydratase; ACT domain; Chorismate mutase type II; TIGRFAM: chorismate mutase domain of proteobacterial P-protein, clade 2
YP_007240154.1	PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase
YP_007240155.1	PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); Prephenate dehydrogenase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase
YP_007240156.1	PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase
YP_007240157.1	PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1
YP_007240158.1	PFAM: MarR family
YP_007240159.1	PFAM: Aminotransferase class I and II
YP_007240160.1	PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain
YP_007240161.1	PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I
YP_007240162.1	PFAM: Smr domain
YP_007240163.1	PFAM: Isochorismatase family
YP_007240164.1	PFAM: Methyltransferase small domain; TIGRFAM: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific; HemK family putative methylases
YP_007240165.1	PFAM: Glucose-6-phosphate dehydrogenase, C-terminal domain; Glucose-6-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glucose-6-phosphate 1-dehydrogenase
YP_007240166.1	TIGRFAM: 6-phosphogluconolactonase
YP_007240167.1	PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase
YP_007240168.1	PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase
YP_007240169.1	PFAM: short chain dehydrogenase
YP_007240170.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; 2-phosphoglycolate phosphatase, prokaryotic
YP_007240171.1	PFAM: Methyltransferase domain; TIGRFAM: ubiquinone biosynthesis O-methyltransferase
YP_007240172.1	PFAM: Amidohydrolase family
YP_007240174.1	PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; 6-pyruvoyl tetrahydropterin synthase/QueD family protein
YP_007240175.1	PFAM: Na+/H+ antiporter family
YP_007240176.1	PFAM: Domain of unknown function DUF20
YP_007240177.1	PFAM: Bacterial protein of unknown function (DUF839)
YP_007240178.1	PFAM: Isocitrate lyase family
YP_007240179.1	PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein
YP_007240181.1	PFAM: Acetyltransferase (GNAT) family
YP_007240182.1	PFAM: Cupin superfamily protein
YP_007240183.1	PFAM: Lyase; Adenylosuccinate lyase C-terminal; TIGRFAM: adenylosuccinate lyase
YP_007240184.1	PFAM: Protein of unknown function (DUF489)
YP_007240185.1	PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
YP_007240186.1	PFAM: NUDIX domain
YP_007240187.1	PFAM: Monomeric isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, monomeric type
YP_007240188.1	PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, prokaryotic type
YP_007240189.1	PFAM: 'Cold-shock' DNA-binding domain; TIGRFAM: cold shock domain protein CspD
YP_007240190.1	PFAM: ATP-dependent Clp protease adaptor protein ClpS; manually curated
YP_007240191.1	PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent Clp protease ATP-binding subunit clpA
YP_007240192.1	PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1
YP_007240193.1	PFAM: Arginine-tRNA-protein transferase, C terminus; Arginine-tRNA-protein transferase, N terminus
YP_007240194.1	PFAM: Leucyl/phenylalanyl-tRNA protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA--protein transferase
YP_007240195.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase
YP_007240196.1	PFAM: Ftsk gamma domain; FtsK/SpoIIIE family
YP_007240197.1	PFAM: Outer membrane lipoprotein carrier protein LolA; TIGRFAM: periplasmic chaperone LolA
YP_007240198.1	PFAM: MgsA AAA+ ATPase C terminal; ATPase family associated with various cellular activities (AAA)
YP_007240199.1	PFAM: CrcB-like protein; TIGRFAM: crcB protein
YP_007240200.1	PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase
YP_007240201.1	PFAM: Sirohaem synthase dimerisation region; Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase, N-terminal domain; uroporphyrinogen-III C-methyltransferase
YP_007240202.1	PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_007240203.1	PFAM: Rhodanese-like domain; TIGRFAM: PQQ-dependent catabolism-associated CXXCW motif protein
YP_007240204.1	PFAM: ABC-2 type transporter; TIGRFAM: alcohol ABC transporter, permease protein; daunorubicin resistance ABC transporter membrane protein
YP_007240205.1	PFAM: ABC transporter; TIGRFAM: ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system
YP_007240206.1	PFAM: Cytochrome D1 heme domain; 3-carboxy-cis,cis-muconate lactonizing enzyme; TIGRFAM: PQQ-dependent catabolism-associated beta-propeller protein; 40-residue YVTN family beta-propeller repeat
YP_007240207.1	PFAM: Sel1 repeat
YP_007240208.1	TIGRFAM: ABC transporter, substrate binding protein, PQQ-dependent alcohol dehydrogenase system
YP_007240209.1	PFAM: HAMP domain; Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_007240211.1	PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_007240212.1	PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_007240213.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain
YP_007240214.1	PFAM: Major Facilitator Superfamily
YP_007240215.1	PFAM: Protein of unknown function (DUF2703); 3'-5' exonuclease
YP_007240216.1	PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; PAS fold; TIGRFAM: PAS domain S-box
YP_007240217.1	PFAM: Pentapeptide repeats (8 copies)
YP_007240218.1	PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family
YP_007240219.1	PFAM: Cytochrome c
YP_007240220.1	PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_007240221.1	PFAM: Sulphur oxidation protein SoxZ
YP_007240222.1	PFAM: Metallo-beta-lactamase superfamily
YP_007240223.1	PFAM: Receptor family ligand binding region
YP_007240224.1	PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family
YP_007240225.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_007240226.1	PFAM: short chain dehydrogenase
YP_007240227.1	PFAM: short chain dehydrogenase
YP_007240228.1	PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region
YP_007240229.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_007240230.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_007240231.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_007240232.1	PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_007240233.1	PFAM: HDOD domain
YP_007240234.1	PFAM: Transglycosylase SLT domain; MLTD_N; LysM domain
YP_007240235.1	PFAM: Metallo-beta-lactamase superfamily; TIGRFAM: hydroxyacylglutathione hydrolase
YP_007240236.1	PFAM: Methyltransferase domain
YP_007240237.1	PFAM: RNase H
YP_007240238.1	PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; DNA polymerase III, epsilon subunit, Proteobacterial
YP_007240239.1	PFAM: Orn/Lys/Arg decarboxylase, C-terminal domain; Orn/Lys/Arg decarboxylase, N-terminal domain; Orn/Lys/Arg decarboxylase, major domain
YP_007240240.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_007240242.1	PFAM: NADH pyrophosphatase zinc ribbon domain; NUDIX domain; NADH pyrophosphatase-like rudimentary NUDIX domain
YP_007240243.1	PFAM: Sulfite exporter TauE/SafE
YP_007240245.1	PFAM: short chain dehydrogenase
YP_007240246.1	PFAM: Phosphotransferase enzyme family
YP_007240247.1	PFAM: SCP-2 sterol transfer family
YP_007240248.1	PFAM: Phosphoglycerate mutase family
YP_007240249.1	PFAM: Peptidase family S49 N-terminal; Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type
YP_007240250.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: putative quinone oxidoreductase, YhdH/YhfP family
YP_007240252.1	PFAM: Bacterial protein of unknown function (DUF934)
YP_007240253.1	PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain
YP_007240254.1	PFAM: Protein of unknown function (DUF2970)
YP_007240255.1	PFAM: Hsp20/alpha crystallin family
YP_007240257.1	PFAM: Protein kinase domain; Leucine Rich Repeat
YP_007240258.1	PFAM: Radical SAM superfamily; TIGRFAM: 23S rRNA m2A2503 methyltransferase
YP_007240260.1	PFAM: Domain of unknown function (DUF1883)
YP_007240261.1	PFAM: EamA-like transporter family
YP_007240263.1	PFAM: Nicotinamide mononucleotide transporter; TIGRFAM: nicotinamide mononucleotide transporter PnuC
YP_007240264.1	PFAM: Acyltransferase family
YP_007240266.1	PFAM: Pterin binding enzyme; Vitamin B12 dependent methionine synthase, activation domain; B12 binding domain; Homocysteine S-methyltransferase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase
YP_007240267.1	PFAM: Fatty acid cis/trans isomerase (CTI)
YP_007240268.1	PFAM: Iron-sulphur cluster biosynthesis; NifU-like domain; TIGRFAM: IscR-regulated protein YhgI
YP_007240269.1	PFAM: Response regulator receiver domain
YP_007240270.1	PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain
YP_007240271.1	PFAM: Eukaryotic DNA topoisomerase I, catalytic core
YP_007240273.1	PFAM: Protein of unknown function (DUF421)
YP_007240276.1	PFAM: Cache domain; HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_007240277.1	PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP
YP_007240278.1	PFAM: alpha/beta hydrolase fold
YP_007240279.1	PFAM: ABC transporter
YP_007240280.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor
YP_007240281.1	PFAM: NMT1/THI5 like; TIGRFAM: TRAP transporter solute receptor, TAXI family
YP_007240282.1	PFAM: Endoribonuclease L-PSP; manually curated
YP_007240283.1	PFAM: FAD dependent oxidoreductase
YP_007240284.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_007240285.1	PFAM: AFG1-like ATPase
YP_007240286.1	PFAM: PPIC-type PPIASE domain
YP_007240287.1	PFAM: Shikimate kinase; Tripartite ATP-independent periplasmic transporters, DctQ component; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family
YP_007240288.1	PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit
YP_007240289.1	PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family
YP_007240290.1	PFAM: Bacterial regulatory proteins, lacI family; family
YP_007240291.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_007240292.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_007240293.1	PFAM: OmpA family; TIGRFAM: phosphate binding protein
YP_007240294.1	PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth)
YP_007240295.1	PFAM: Acetyltransferase (GNAT) family
YP_007240296.1	PFAM: Surface antigen variable number repeat; Surface antigen
YP_007240297.1	PFAM: Family of unknown function (DUF490)
YP_007240298.1	PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein
YP_007240299.1	PFAM: Redoxin
YP_007240300.1	PFAM: Homoserine dehydrogenase, NAD binding domain
YP_007240301.1	PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN
YP_007240302.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_007240303.1	PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
YP_007240304.1	PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
YP_007240305.1	PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family
YP_007240306.1	PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family
YP_007240307.1	PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family
YP_007240308.1	PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
YP_007240309.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_007240310.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_007240311.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_007240312.1	PFAM: short chain dehydrogenase
YP_007240313.1	PFAM: Ku70/Ku80 beta-barrel domain; TIGRFAM: Ku protein, prokaryotic
YP_007240314.1	PFAM: Eukaryotic and archaeal DNA primase small subunit; TIGRFAM: DNA ligase D; DNA polymerase LigD, polymerase domain
YP_007240315.1	PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, proteobacterial-type; Contains selenocysteine; manually curated
YP_007240316.1	PFAM: Formate dehydrogenase N, transmembrane; TIGRFAM: formate dehydrogenase, beta subunit, Fe-S containing
YP_007240317.1	PFAM: Cytochrome b(N-terminal)/b6/petB; TIGRFAM: formate dehydrogenase, gamma subunit
YP_007240318.1	PFAM: Protein involved in formate dehydrogenase formation; TIGRFAM: formate dehydrogenase accessory protein FdhE
YP_007240320.1	PFAM: Alpha amylase, catalytic domain; Domain of unknown function (DUF3416)
YP_007240321.1	PFAM: Alpha amylase, catalytic domain; TIGRFAM: trehalose synthase-fused probable maltokinase; trehalose synthase
YP_007240322.1	PFAM: Alpha amylase, C-terminal all-beta domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase
YP_007240323.1	PFAM: Uncharacterised protein family (UPF0104)
YP_007240324.1	PFAM: Phospholipase D Active site motif
YP_007240325.1	PFAM: Endonuclease/Exonuclease/phosphatase family
YP_007240326.1	PFAM: Protein of unknown function DUF72
YP_007240327.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_007240328.1	PFAM: Catalytic LigB subunit of aromatic ring-opening dioxygenase
YP_007240329.1	PFAM: Cytochrome b(N-terminal)/b6/petB; Uncharacterized protein conserved in bacteria (DUF2218)
YP_007240330.1	PFAM: Peptidase family M23
YP_007240331.1	PFAM: Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); TIGRFAM: glycogen debranching enzyme GlgX
YP_007240332.1	PFAM: Protein of unknown function (DUF2934)
YP_007240333.1	PFAM: Alpha amylase, catalytic domain; TIGRFAM: malto-oligosyltrehalose synthase
YP_007240334.1	PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase
YP_007240335.1	PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; Domain of unknown function (DUF3459); TIGRFAM: malto-oligosyltrehalose trehalohydrolase
YP_007240336.1	PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; TIGRFAM: glycogen/starch synthases, ADP-glucose type
YP_007240337.1	PFAM: Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA C-terminal domain
YP_007240338.1	PFAM: Mechanosensitive ion channel
YP_007240339.1	PFAM: Domain of unknown function (DUF892)
YP_007240340.1	PFAM: Predicted membrane protein (DUF2061)
YP_007240341.1	PFAM: Protein of unknown function (DUF1652)
YP_007240343.1	PFAM: ATP dependent DNA ligase domain; Eukaryotic and archaeal DNA primase small subunit; ATP dependent DNA ligase C terminal region; TIGRFAM: DNA polymerase LigD, ligase domain; DNA ligase D; DNA ligase D, 3'-phosphoesterase domain; DNA polymerase LigD, polymerase domain; ATP-dependent DNA ligase LigD polymerase module
YP_007240344.1	PFAM: Curlin associated repeat
YP_007240345.1	PFAM: Protein of unknown function (DUF1615)
YP_007240346.1	PFAM: Protein of unknown function (DUF2790)
YP_007240347.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_007240348.1	PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family
YP_007240349.1	PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit
YP_007240350.1	PFAM: Protein of unknown function (DUF1656)
YP_007240351.1	PFAM: Fusaric acid resistance protein family
YP_007240352.1	PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_007240353.1	PFAM: DASH complex subunit Dad3
YP_007240355.1	PFAM: Phage X family; Phage replication protein CRI; TIGRFAM: phage/plasmid replication protein, gene II/X family
YP_007240360.1	PFAM: Protein of unknown function (DUF2523)
YP_007240361.1	PFAM: Zonular occludens toxin (Zot)
YP_007240362.1	PFAM: DASH complex subunit Dad3
YP_007240364.1	PFAM: Phage X family; Phage replication protein CRI; TIGRFAM: phage/plasmid replication protein, gene II/X family
YP_007240369.1	PFAM: Protein of unknown function (DUF2523)
YP_007240370.1	PFAM: Zonular occludens toxin (Zot)
YP_007240371.1	PFAM: DASH complex subunit Dad3
YP_007240374.1	PFAM: DASH complex subunit Dad3
YP_007240377.1	PFAM: DASH complex subunit Dad3
YP_007240380.1	PFAM: Phosphopantetheine attachment site
YP_007240381.1	PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme
YP_007240382.1	PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain
YP_007240383.1	PFAM: Dehydrogenase E1 component; TIGRFAM: pyruvate dehydrogenase E1 component, alpha subunit
YP_007240384.1	PFAM: AMP-binding enzyme
YP_007240385.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase
YP_007240386.1	PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain
YP_007240387.1	PFAM: Prokaryotic diacylglycerol kinase
YP_007240388.1	PFAM: Sulfatase
YP_007240390.1	manually curated
YP_007240391.1	PFAM: Protein of unknown function (DUF461)
YP_007240392.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: glutathione-disulfide reductase, plant; glutathione-disulfide reductase, animal/bacterial
YP_007240393.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_007240394.1	PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase
YP_007240395.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_007240396.1	PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase
YP_007240397.1	PFAM: VRR-NUC domain
YP_007240398.1	PFAM: DEAD_2
YP_007240400.1	PFAM: RES domain
YP_007240403.1	PFAM: Major Facilitator Superfamily
YP_007240404.1	PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I
YP_007240405.1	PFAM: Uncharacterised BCR, YnfA/UPF0060 family
YP_007240406.1	PFAM: Dual specificity phosphatase, catalytic domain
YP_007240407.1	PFAM: NADPH-dependent FMN reductase; TIGRFAM: arsenical resistance protein ArsH
YP_007240408.1	PFAM: Low molecular weight phosphotyrosine protein phosphatase
YP_007240409.1	PFAM: Bacterial regulatory protein, arsR family
YP_007240410.1	PFAM: Low molecular weight phosphotyrosine protein phosphatase
YP_007240411.1	PFAM: Flavin-binding monooxygenase-like; Thi4 family
YP_007240412.1	PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein
YP_007240413.1	PFAM: Predicted permease
YP_007240414.1	TIGRFAM: small redox-active disulfide protein 2
YP_007240417.1	PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
YP_007240418.1	PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit
YP_007240419.1	PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_007240421.1	PFAM: Cation efflux family; Heavy-metal-associated domain
YP_007240422.1	PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium)
YP_007240423.1	PFAM: Copper binding periplasmic protein CusF; TIGRFAM: RND family efflux transporter, MFP subunit
YP_007240424.1	PFAM: Outer membrane efflux protein
YP_007240426.1	PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_007240427.1	PFAM: Iron-containing alcohol dehydrogenase
YP_007240428.1	PFAM: Prolyl oligopeptidase family
YP_007240429.1	PFAM: Radical SAM superfamily; TIGRFAM: coenzyme PQQ biosynthesis protein E; radical SAM additional 4Fe4S-binding domain
YP_007240430.1	PFAM: Coenzyme PQQ synthesis protein D (PqqD); TIGRFAM: coenzyme PQQ biosynthesis protein PqqD
YP_007240431.1	PFAM: TENA/THI-4/PQQC family; TIGRFAM: coenzyme PQQ biosynthesis protein C
YP_007240432.1	TIGRFAM: coenzyme PQQ biosynthesis protein B
YP_007240433.1	PFAM: PqqA family; TIGRFAM: coenzyme PQQ biosynthesis protein A; manually curated
YP_007240434.1	PFAM: NADH:flavin oxidoreductase / NADH oxidase family
YP_007240435.1	PFAM: Aldehyde dehydrogenase family
YP_007240436.1	PFAM: PqqA family; TIGRFAM: coenzyme PQQ biosynthesis protein A; manually curated
YP_007240437.1	PFAM: Coenzyme PQQ synthesis protein D (PqqD); TIGRFAM: coenzyme PQQ biosynthesis protein PqqD
YP_007240438.1	PFAM: Radical SAM superfamily; TIGRFAM: coenzyme PQQ biosynthesis protein E; radical SAM additional 4Fe4S-binding domain
YP_007240439.1	PFAM: Protein of unknown function (DUF989)
YP_007240440.1	PFAM: Aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase
YP_007240441.1	PFAM: Dihydroorotate dehydrogenase
YP_007240442.1	PFAM: PPIC-type PPIASE domain
YP_007240443.1	PFAM: Bacterial DNA-binding protein
YP_007240444.1	PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La
YP_007240445.1	PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX)
YP_007240446.1	PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP
YP_007240447.1	PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Bacterial trigger factor protein (TF); Bacterial trigger factor protein (TF) C-terminus; TIGRFAM: trigger factor
YP_007240448.1	PFAM: von Willebrand factor type A domain
YP_007240449.1	PFAM: AAA domain (dynein-related subfamily); CbbQ/NirQ/NorQ C-terminal
YP_007240450.1	PFAM: Cytochrome C and Quinol oxidase polypeptide I
YP_007240451.1	PFAM: Cytochrome c
YP_007240453.1	PFAM: Multicopper oxidase; Copper binding proteins, plastocyanin/azurin family; TIGRFAM: nitrite reductase, copper-containing
YP_007240454.1	PFAM: Sulfite exporter TauE/SafE
YP_007240455.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_007240457.1	PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
YP_007240458.1	PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase
YP_007240459.1	PFAM: tRNA synthetases class I (E and Q), catalytic domain; tRNA synthetases class I (E and Q), anti-codon binding domain; TIGRFAM: glutaminyl-tRNA synthetase
YP_007240460.1	PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
YP_007240461.1	PFAM: Calcineurin-like phosphoesterase; TIGRFAM: UDP-2,3-diacylglucosamine hydrolase
YP_007240462.1	PFAM: tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)
YP_007240463.1	PFAM: Universal stress protein family
YP_007240464.1	PFAM: Protein of unknown function (DUF1289)
YP_007240465.1	PFAM: Aconitate B N-terminal domain; Aconitase family (aconitate hydratase); Aconitate hydratase 2 N-terminus; TIGRFAM: aconitate hydratase 2
YP_007240466.1	PFAM: OprF membrane domain; OmpA family
YP_007240467.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_007240468.1	PFAM: Mechanosensitive ion channel; Conserved TM helix
YP_007240470.1	PFAM: CorA-like Mg2+ transporter protein
YP_007240471.1	PFAM: Demethylmenaquinone methyltransferase; TIGRFAM: RraA famliy
YP_007240472.1	PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: phosphoenolpyruvate synthase
YP_007240473.1	PFAM: Domain of unknown function (DUF299)
YP_007240474.1	PFAM: PrpF protein; TIGRFAM: probable AcnD-accessory protein PrpF
YP_007240475.1	PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: 2-methylisocitrate dehydratase, Fe/S-dependent; aconitate hydratase 1
YP_007240476.1	PFAM: Citrate synthase; TIGRFAM: 2-methylcitrate synthase/citrate synthase II
YP_007240477.1	PFAM: Isocitrate lyase family; TIGRFAM: methylisocitrate lyase
YP_007240478.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_007240479.1	PFAM: Protein of unknown function (DUF785)
YP_007240481.1	PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligase-related protein
YP_007240482.1	PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: aminodeoxychorismate synthase, component I, bacterial clade
YP_007240483.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein
YP_007240484.1	PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: thioredoxin-dependent adenylylsulfate APS reductase; phosophoadenylyl-sulfate reductase (thioredoxin)
YP_007240485.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_007240486.1	PFAM: Ketopantoate reductase PanE/ApbA; Ketopantoate reductase PanE/ApbA C terminal; TIGRFAM: 2-dehydropantoate 2-reductase
YP_007240487.1	PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase
YP_007240488.1	PFAM: Acetyltransferase (GNAT) family
YP_007240489.1	PFAM: Protein of unknown function (DUF3359)
YP_007240490.1	PFAM: L,D-transpeptidase catalytic domain
YP_007240492.1	PFAM: GDSL-like Lipase/Acylhydrolase
YP_007240493.1	PFAM: ABC transporter
YP_007240494.1	PFAM: Predicted permease
YP_007240495.1	PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA; transcription elongation factor GreB
YP_007240496.1	PFAM: alpha/beta hydrolase fold
YP_007240497.1	PFAM: Proteobacterial lipase chaperone protein
YP_007240498.1	PFAM: Transglycosylase SLT domain; Bacterial extracellular solute-binding proteins, family 3
YP_007240499.1	PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family
YP_007240500.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_007240501.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_007240502.1	PFAM: ABC transporter
YP_007240503.1	PFAM: Domain of unknown function (DUF1989); TIGRFAM: urea carboxylase-associated protein 2
YP_007240504.1	PFAM: Domain of unknown function (DUF1989); TIGRFAM: urea carboxylase-associated protein 1
YP_007240505.1	PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; Carbamoyl-phosphate synthase L chain, N-terminal domain; Biotin-requiring enzyme; TIGRFAM: urea carboxylase; biotin-dependent carboxylase uncharacterized domain
YP_007240506.1	PFAM: Amidase; TIGRFAM: allophanate hydrolase
YP_007240507.1	PFAM: Aldo/keto reductase family
YP_007240508.1	PFAM: NMT1/THI5 like
YP_007240509.1	PFAM: Fatty acid desaturase
YP_007240510.1	PFAM: short chain dehydrogenase
YP_007240511.1	PFAM: short chain dehydrogenase
YP_007240512.1	PFAM: EamA-like transporter family
YP_007240513.1	PFAM: Creatinine amidohydrolase
YP_007240514.1	PFAM: Isochorismatase family
YP_007240515.1	PFAM: Metallo-beta-lactamase superfamily
YP_007240517.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_007240518.1	PFAM: ABC transporter
YP_007240519.1	PFAM: alpha/beta hydrolase fold; TIGRFAM: homoserine O-acetyltransferase
YP_007240520.1	PFAM: Glutamine synthetase, catalytic domain; TIGRFAM: glutamine synthetase, type I; glutamine synthetase, type III
YP_007240521.1	PFAM: NMT1/THI5 like; TIGRFAM: ABC transporter periplasmic binding protein, urea carboxylase region
YP_007240522.1	PFAM: MAATS-type transcriptional repressor, C-terminal region; Bacterial regulatory proteins, tetR family
YP_007240523.1	PFAM: Protein of unknown function (DUF1652)
YP_007240524.1	PFAM: Uncharacterised protein family UPF0005
YP_007240525.1	PFAM: DsrE/DsrF-like family; TIGRFAM: sulfur relay protein TusD/DsrE
YP_007240526.1	PFAM: DsrE/DsrF-like family; TIGRFAM: sulfur relay protein TusC/DsrF
YP_007240527.1	PFAM: DsrH like protein; TIGRFAM: sulfur relay protein TusB/DsrH
YP_007240528.1	PFAM: DsrC like protein; TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family
YP_007240529.1	PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain
YP_007240530.1	PFAM: Glutathione S-transferase, C-terminal domain
YP_007240531.1	PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_007240532.1	PFAM: FIST C domain; FIST N domain; manually curated
YP_007240534.1	PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); TIGRFAM: coenzyme PQQ biosynthesis probable peptidase PqqF
YP_007240535.1	PFAM: MerR family regulatory protein
YP_007240536.1	PFAM: Protein of unknown function, DUF393
YP_007240538.1	PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I
YP_007240539.1	PFAM: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain
YP_007240541.1	PFAM: Major Facilitator Superfamily
YP_007240543.1	PFAM: PAS fold; TIGRFAM: PAS domain S-box
YP_007240544.1	PFAM: EAL domain; 5TMR of 5TMR-LYT; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain
YP_007240545.1	PFAM: Ferrochelatase; TIGRFAM: ferrochelatase
YP_007240546.1	PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: TIGR01777 family protein
YP_007240547.1	PFAM: Protein of unknown function (DUF523); Protein of unknown function (DUF1722)
YP_007240548.1	PFAM: MerR family regulatory protein
YP_007240549.1	PFAM: FAD binding domain of DNA photolyase; DNA photolyase
YP_007240550.1	PFAM: SnoaL-like polyketide cyclase
YP_007240551.1	PFAM: short chain dehydrogenase
YP_007240552.1	PFAM: Flavin containing amine oxidoreductase
YP_007240553.1	PFAM: Protein of unknown function (DUF1365)
YP_007240554.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase
YP_007240555.1	PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_007240556.1	PFAM: HemN C-terminal region
YP_007240557.1	PFAM: Sir2 family
YP_007240558.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S] binding domain; Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: nitrite reductase [NAD(P)H], large subunit
YP_007240559.1	TIGRFAM: nitrite reductase [NAD(P)H], small subunit
YP_007240560.1	PFAM: Formate/nitrite transporter; TIGRFAM: formate/nitrite transporter
YP_007240561.1	PFAM: Protein kinase domain; Stage II sporulation protein E (SpoIIE)
YP_007240562.1	PFAM: UvrD/REP helicase
YP_007240563.1	PFAM: Response regulator receiver domain; GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_007240564.1	PFAM: Bacterial protein of unknown function (DUF839)
YP_007240565.1	PFAM: Gram-negative bacterial tonB protein
YP_007240566.1	PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TolR protein; TC 2.C.1.2.1
YP_007240567.1	PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: TolQ protein; TC 2.C.1.2.1
YP_007240568.1	PFAM: Phytase
YP_007240569.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent receptor
YP_007240570.1	PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_007240571.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_007240572.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_007240573.1	PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase family accessory protein FdhD
YP_007240574.1	PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit
YP_007240575.1	PFAM: Glutathione-dependent formaldehyde-activating enzyme
YP_007240576.1	PFAM: TrkA-N domain; TrkA-C domain
YP_007240577.1	PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family
YP_007240578.1	PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_007240579.1	PFAM: Bacterial SH3 domain
YP_007240581.1	PFAM: AzlC protein
YP_007240582.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain
YP_007240583.1	PFAM: Transglycosylase
YP_007240584.1	PFAM: Endonuclease/Exonuclease/phosphatase family
YP_007240585.1	PFAM: Carbohydrate phosphorylase; Protein of unknown function (DUF3417); TIGRFAM: alpha-glucan phosphorylases
YP_007240586.1	PFAM: Protein of unknown function (DUF2892)
YP_007240587.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_007240588.1	PFAM: Aldehyde dehydrogenase family; TIGRFAM: methylmalonic acid semialdehyde dehydrogenase
YP_007240589.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_007240590.1	PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 3-hydroxyisobutyrate dehydrogenase
YP_007240591.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_007240592.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_007240595.1	PFAM: CoA-transferase family III
YP_007240596.1	PFAM: AMP-binding enzyme
YP_007240597.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_007240598.1	PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases
YP_007240599.1	PFAM: short chain dehydrogenase
YP_007240600.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_007240601.1	PFAM: SNARE associated Golgi protein
YP_007240603.1	PFAM: Glutaredoxin
YP_007240604.1	PFAM: Cytochrome c bacterial; Doubled CXXCH motif (Paired_CXXCH_1)
YP_007240605.1	PFAM: Cytochrome b(N-terminal)/b6/petB
YP_007240606.1	PFAM: Rhodanese-like domain
YP_007240608.1	PFAM: Transglutaminase-like superfamily; Domain of unknown function (DUF3488)
YP_007240609.1	PFAM: Protein of unknown function DUF58
YP_007240610.1	PFAM: ATPase family associated with various cellular activities (AAA)
YP_007240611.1	PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_007240613.1	TIGRFAM: tRNA 2-selenouridine synthase
YP_007240614.1	PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: selenium donor protein
YP_007240615.1	PFAM: Patatin-like phospholipase
YP_007240616.1	PFAM: Domain of unknown function DUF20
YP_007240618.1	PFAM: alpha/beta hydrolase fold
YP_007240619.1	PFAM: Thioesterase domain
YP_007240620.1	PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1
YP_007240621.1	PFAM: Phosphoglycerate mutase family; TIGRFAM: phosphohistidine phosphatase SixA
YP_007240623.1	PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
YP_007240624.1	PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA
YP_007240625.1	PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain
YP_007240626.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_007240627.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_007240628.1	PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases
YP_007240629.1	PFAM: AMP-binding enzyme; manually curated
YP_007240630.1	PFAM: Sodium:dicarboxylate symporter family
YP_007240631.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_007240632.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_007240634.1	PFAM: Amidohydrolase
YP_007240635.1	PFAM: OsmC-like protein
YP_007240636.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein
YP_007240638.1	PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1
YP_007240639.1	PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1
YP_007240640.1	PFAM: Protein of unknown function, DUF599
YP_007240641.1	PFAM: Branched-chain amino acid transport protein; TIGRFAM: branched-chain amino acid uptake carrier
YP_007240642.1	PFAM: CoA binding domain; CoA-ligase; TIGRFAM: succinyl-CoA synthetase, alpha subunit
YP_007240643.1	PFAM: CoA-ligase; ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase, beta subunit
YP_007240644.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase
YP_007240645.1	PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component)
YP_007240646.1	PFAM: Dehydrogenase E1 component; Transketolase, pyrimidine binding domain; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component
YP_007240647.1	TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein
YP_007240648.1	PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
YP_007240649.1	PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein
YP_007240650.1	PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit
YP_007240651.1	PFAM: Citrate synthase; TIGRFAM: citrate synthase I (hexameric type)
YP_007240652.1	manually curated
YP_007240653.1	PFAM: Protein of unknown function, DUF486
YP_007240654.1	PFAM: Protein of unknown function (DUF1255)
YP_007240656.1	PFAM: Flagellar protein FliS; TIGRFAM: flagellar biosynthetic protein FliS
YP_007240657.1	PFAM: Flagellar hook-associated protein 2 C-terminus; Flagellin hook IN motif
YP_007240658.1	PFAM: FlaG protein
YP_007240659.1	PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region
YP_007240660.1	PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; BRCA1 C Terminus (BRCT) domain; TIGRFAM: DNA ligase, NAD-dependent
YP_007240661.1	PFAM: ZipA, C-terminal FtsZ-binding domain; TIGRFAM: cell division protein ZipA
YP_007240662.1	PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: chromosome segregation protein SMC, common bacterial type
YP_007240663.1	PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial
YP_007240664.1	PFAM: Ion transport protein
YP_007240665.1	PFAM: Uncharacterised protein family (UPF0093)
YP_007240666.1	PFAM: Predicted membrane protein (DUF2231)
YP_007240667.1	PFAM: Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome c; TIGRFAM: cytochrome c oxidase, subunit II
YP_007240668.1	PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, subunit I
YP_007240670.1	PFAM: Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG)
YP_007240671.1	PFAM: SirA-like protein
YP_007240672.1	PFAM: FtsJ-like methyltransferase
YP_007240673.1	PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase 1
YP_007240674.1	PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; PAS fold; TIGRFAM: PAS domain S-box
YP_007240675.1	PFAM: Dienelactone hydrolase family
YP_007240676.1	PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I
YP_007240677.1	PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II
YP_007240678.1	PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III
YP_007240679.1	PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I
YP_007240680.1	PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II
YP_007240681.1	PFAM: Cbb3-type cytochrome oxidase component FixQ
YP_007240682.1	PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III
YP_007240683.1	PFAM: Ubp3 associated protein Bre5; TIGRFAM: cytochrome c oxidase accessory protein FixG
YP_007240684.1	PFAM: FixH
YP_007240685.1	PFAM: E1-E2 ATPase; Heavy-metal-associated domain; Putative metal-binding domain of cation transport ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
YP_007240686.1	PFAM: Cytochrome oxidase maturation protein cbb3-type; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type
YP_007240687.1	PFAM: Cytochrome C biogenesis protein transmembrane region
YP_007240688.1	PFAM: NAD synthase; TIGRFAM: NAD+ synthetase
YP_007240689.1	PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase
YP_007240690.1	PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain
YP_007240691.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase
YP_007240692.1	PFAM: SCO1/SenC
YP_007240693.1	PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_007240694.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_007240695.1	PFAM: ABC transporter
YP_007240696.1	PFAM: NMT1/THI5 like
YP_007240697.1	PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR
YP_007240698.1	PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: DNA-binding protein, YbaB/EbfC family
YP_007240699.1	PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III, subunit gamma and tau
YP_007240700.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; Domain of unknown function (DUF3410); D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_007240701.1	PFAM: MatE; TIGRFAM: putative efflux protein, MATE family
YP_007240702.1	PFAM: Rhodanese-like domain; Cyclic nucleotide-binding domain
YP_007240703.1	manually curated
YP_007240705.1	PFAM: SnoaL-like polyketide cyclase
YP_007240706.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH:flavin oxidoreductase / NADH oxidase family
YP_007240708.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_007240709.1	PFAM: Protein of unknown function (DUF2474)
YP_007240710.1	PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB)
YP_007240711.1	PFAM: Bacterial Cytochrome Ubiquinol Oxidase
YP_007240712.1	PFAM: Thermolysin metallopeptidase, alpha-helical domain; Thermolysin metallopeptidase, catalytic domain
YP_007240714.1	PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain
YP_007240715.1	PFAM: Major Facilitator Superfamily
YP_007240716.1	PFAM: NADPH-dependent FMN reductase; TIGRFAM: NAD(P)H:quinone oxidoreductase, type IV
YP_007240717.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_007240718.1	PFAM: 3-demethylubiquinone-9 3-methyltransferase
YP_007240720.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_007240721.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_007240722.1	PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain
YP_007240723.1	PFAM: Pyridoxamine 5'-phosphate oxidase
YP_007240725.1	PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein; TIGRFAM: general secretion pathway protein D
YP_007240726.1	PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: O-succinylhomoserine sulfhydrylase
YP_007240727.1	PFAM: Phosphoribosyl transferase domain; Glutamine amidotransferases class-II; TIGRFAM: amidophosphoribosyltransferase
YP_007240728.1	PFAM: Colicin V production protein
YP_007240729.1	PFAM: Sporulation related domain
YP_007240730.1	PFAM: Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase
YP_007240731.1	PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit
YP_007240732.1	PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase
YP_007240733.1	PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I
YP_007240734.1	TIGRFAM: FimV C-terminal domain; FimV N-terminal domain
YP_007240735.1	PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain
YP_007240736.1	PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase, gamma-proteobacterial
YP_007240737.1	PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase
YP_007240738.1	PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit
YP_007240739.1	PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit
YP_007240740.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_007240741.1	PFAM: Hsp20/alpha crystallin family
YP_007240742.1	PFAM: short chain dehydrogenase
YP_007240743.1	PFAM: Dihydrouridine synthase (Dus)
YP_007240746.1	PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family
YP_007240747.1	PFAM: Polysaccharide biosynthesis protein
YP_007240748.1	PFAM: Glycosyl transferase family 2
YP_007240749.1	PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; exopolysaccharide transport protein family
YP_007240750.1	PFAM: WbqC-like protein family
YP_007240751.1	PFAM: Transcription termination factor nusG; TIGRFAM: transcriptional activator RfaH
YP_007240752.1	PFAM: Glycosyl transferases group 1
YP_007240753.1	manually curated
YP_007240755.1	PFAM: Glycosyl transferases group 1
YP_007240757.1	PFAM: Glycosyl transferases group 1
YP_007240760.1	PFAM: Glycosyl transferase family 2
YP_007240761.1	PFAM: Acyltransferase family
YP_007240763.1	PFAM: Bacterial type II secretion system protein F domain
YP_007240764.1	PFAM: Bacterial type II secretion system protein F domain
YP_007240765.1	PFAM: Type II/IV secretion system protein
YP_007240766.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_007240767.1	PFAM: TadE-like protein
YP_007240768.1	PFAM: TadE-like protein
YP_007240771.1	PFAM: Putative phospholipid-binding domain; Bacterial type II and III secretion system protein
YP_007240772.1	PFAM: SAF domain; TIGRFAM: Flp pilus assembly protein CpaB
YP_007240774.1	PFAM: Type IV leader peptidase family
YP_007240775.1	PFAM: Flp/Fap pilin component
YP_007240777.1	PFAM: Response regulator receiver domain; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_007240778.1	PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: ribosomal protein S12 methylthiotransferase RimO; radical SAM methylthiotransferase, MiaB/RimO family
YP_007240779.1	PFAM: GMC oxidoreductase; TIGRFAM: choline dehydrogenase
YP_007240780.1	PFAM: Aldehyde dehydrogenase family; TIGRFAM: glycine betaine aldehyde dehydrogenase
YP_007240781.1	PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport
YP_007240782.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit
YP_007240783.1	PFAM: Uncharacterised protein family UPF0066; TIGRFAM: putative methyltransferase, YaeB/AF_0241 family
YP_007240784.1	PFAM: Penicillin amidase
YP_007240785.1	PFAM: Protein of unknown function (DUF2489)
YP_007240786.1	PFAM: SEC-C motif
YP_007240787.1	PFAM: Late embryogenesis abundant protein
YP_007240788.1	PFAM: Phosphorylase superfamily; TIGRFAM: 5'-deoxy-5'-methylthioadenosine phosphorylase
YP_007240789.1	PFAM: Glycosyl hydrolase family 3 N terminal domain
YP_007240790.1	PFAM: L,D-transpeptidase catalytic domain
YP_007240791.1	PFAM: Bacterial regulatory proteins, tetR family
YP_007240792.1	PFAM: LexA DNA binding domain; Peptidase S24-like; TIGRFAM: SOS regulatory protein LexA
YP_007240793.1	PFAM: Cell division inhibitor SulA
YP_007240795.1	PFAM: EamA-like transporter family
YP_007240797.1	PFAM: Toprim domain; Topoisomerase DNA binding C4 zinc finger; Topoisomerase I zinc-ribbon-like; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial
YP_007240798.1	PFAM: Protein of unknown function (DUF1653)
YP_007240799.1	PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; fatty oxidation complex, beta subunit FadA
YP_007240800.1	PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; TIGRFAM: fatty oxidation complex, alpha subunit FadB
YP_007240801.1	PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase family
YP_007240802.1	PFAM: Protein of unknown function (DUF2892)
YP_007240803.1	PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetate--CoA ligase
YP_007240804.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_007240805.1	PFAM: CoA-transferase family III
YP_007240806.1	PFAM: HMGL-like
YP_007240808.1	PFAM: alpha/beta hydrolase fold
YP_007240809.1	PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family
YP_007240810.1	PFAM: HpcH/HpaI aldolase/citrate lyase family
YP_007240811.1	PFAM: CoA-transferase family III
YP_007240812.1	PFAM: MmgE/PrpD family
YP_007240813.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_007240814.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_007240816.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_007240817.1	PFAM: Predicted membrane protein (DUF2254)
YP_007240818.1	PFAM: Major Facilitator Superfamily
YP_007240819.1	PFAM: RF-1 domain
YP_007240820.1	PFAM: Predicted membrane-bound metal-dependent hydrolase (DUF457)
YP_007240821.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_007240822.1	PFAM: ABC transporter transmembrane region; ABC transporter
YP_007240823.1	PFAM: DSBA-like thioredoxin domain
YP_007240824.1	PFAM: Rhodanese-like domain
YP_007240825.1	PFAM: BolA-like protein
YP_007240826.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2059)
YP_007240827.1	PFAM: Fumarase C C-terminus; Lyase; TIGRFAM: fumarate hydratase, class II
YP_007240829.1	PFAM: outer membrane porin, OprD family
YP_007240830.1	PFAM: Benzoate membrane transport protein; TIGRFAM: benzoate transporter
YP_007240831.1	PFAM: Dioxygenase; Catechol dioxygenase N terminus; TIGRFAM: catechol 1,2-dioxygenase, proteobacterial
YP_007240832.1	PFAM: Muconolactone delta-isomerase; TIGRFAM: muconolactone delta-isomerase
YP_007240833.1	PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; TIGRFAM: muconate and chloromuconate cycloisomerases
YP_007240834.1	PFAM: Major Facilitator Superfamily; TIGRFAM: benzoate transport
YP_007240835.1	PFAM: short chain dehydrogenase
YP_007240836.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain
YP_007240837.1	PFAM: Ring hydroxylating beta subunit; TIGRFAM: benzoate 1,2-dioxygenase, small subunit
YP_007240838.1	PFAM: Ring hydroxylating alpha subunit (catalytic domain); Rieske [2Fe-2S] domain; TIGRFAM: benzoate 1,2-dioxygenase, large subunit
YP_007240839.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain
YP_007240840.1	PFAM: HD domain; Response regulator receiver domain
YP_007240841.1	PFAM: Cache domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_007240842.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_007240843.1	PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_007240844.1	PFAM: Dihydrouridine synthase (Dus); TIGRFAM: tRNA dihydrouridine synthase A
YP_007240846.1	PFAM: Transaldolase; TIGRFAM: transaldolase
YP_007240847.1	PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_007240848.1	PFAM: Response regulator receiver domain; Stage II sporulation protein E (SpoIIE)
YP_007240849.1	PFAM: PilZ domain
YP_007240850.1	PFAM: VacJ like lipoprotein
YP_007240852.1	PFAM: GTP cyclohydrolase I; TIGRFAM: 7-cyano-7-deazaguanine reductase
YP_007240853.1	PFAM: ABC-2 type transporter
YP_007240854.1	PFAM: ABC transporter
YP_007240855.1	PFAM: Succinylglutamate desuccinylase / Aspartoacylase family; TIGRFAM: succinylglutamate desuccinylase
YP_007240857.1	PFAM: Aminotransferase class-III; TIGRFAM: succinylornithine transaminase family; acetylornithine and succinylornithine aminotransferases
YP_007240858.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_007240859.1	PFAM: Domain of unknown function (DUF3391); HD domain
YP_007240860.1	PFAM: Protein of unknown function (DUF1810)
YP_007240863.1	PFAM: Rhodanese-like domain
YP_007240864.1	PFAM: Mechanosensitive ion channel
YP_007240865.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Domain of unknown function (DUF1974); Acyl-CoA dehydrogenase, N-terminal domain; manually curated
YP_007240866.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_007240867.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_007240868.1	PFAM: Ribonucleotide reductase, all-alpha domain; ATP cone domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit
YP_007240869.1	PFAM: Ribonucleotide reductase, small chain
YP_007240870.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2188)
YP_007240872.1	PFAM: Transposase IS200 like
YP_007240873.1	PFAM: Topoisomerase DNA binding C4 zinc finger; Restriction endonuclease
YP_007240875.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; manually curated
YP_007240876.1	PFAM: Flavodoxin-like fold
YP_007240877.1	PFAM: Peroxidase; TIGRFAM: catalase/peroxidase HPI
YP_007240878.1	PFAM: Acetyltransferase (GNAT) family
YP_007240879.1	PFAM: Methyltransferase domain
YP_007240880.1	PFAM: Activator of Hsp90 ATPase homolog 1-like protein
YP_007240881.1	PFAM: Bacterial regulatory proteins, tetR family
YP_007240882.1	PFAM: Protein of unknown function (DUF2855)
YP_007240883.1	PFAM: Flavodoxin-like fold
YP_007240884.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_007240885.1	PFAM: HxlR-like helix-turn-helix
YP_007240886.1	PFAM: NAD dependent epimerase/dehydratase family
YP_007240887.1	PFAM: SpoU rRNA Methylase family
YP_007240888.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2141)
YP_007240890.1	PFAM: Fatty acid hydroxylase superfamily
YP_007240891.1	PFAM: SMP-30/Gluconolaconase/LRE-like region
YP_007240894.1	PFAM: MerR family regulatory protein; MerR, DNA binding; TIGRFAM: Hg(II)-responsive transcriptional regulator
YP_007240895.1	PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter
YP_007240897.1	PFAM: Cysteine-rich secretory protein family
YP_007240899.1	PFAM: Glycosyltransferase family 36; Uncharacterized protein conserved in bacteria (DUF2329); Putative carbohydrate binding domain; Glycosyltransferase 36 associated family
YP_007240901.1	PFAM: Collagenase; Peptidase family U32
YP_007240903.1	PFAM: Protein of unknown function DUF72
YP_007240904.1	PFAM: Ion channel
YP_007240906.1	PFAM: Helicase conserved C-terminal domain; Mitochondrial degradasome RNA helicase subunit C terminal
YP_007240907.1	PFAM: Protein of unknown function (DUF1275)
YP_007240908.1	PFAM: Major intrinsic protein; TIGRFAM: MIP family channel proteins
YP_007240909.1	PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase
YP_007240910.1	PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain
YP_007240911.1	PFAM: FAD dependent oxidoreductase
YP_007240912.1	PFAM: Cell division protein ZapA
YP_007240914.1	PFAM: PPIC-type PPIASE domain
YP_007240915.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_007240916.1	PFAM: Protein of unknown function (DUF3478)
YP_007240917.1	PFAM: Domain of unknown function (DUF3597)
YP_007240918.1	PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein
YP_007240920.1	PFAM: Inositol monophosphatase family
YP_007240922.1	PFAM: Domain of unknown function (DUF3597)
YP_007240923.1	PFAM: Protein of unknown function (DUF2789)
YP_007240924.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
YP_007240925.1	PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter
YP_007240926.1	PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative
YP_007240928.1	PFAM: MOSC domain
YP_007240930.1	PFAM: EamA-like transporter family
YP_007240931.1	PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family
YP_007240932.1	PFAM: HNH endonuclease
YP_007240933.1	PFAM: Universal stress protein family
YP_007240934.1	PFAM: Bacterial-like globin
YP_007240935.1	PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family
YP_007240938.1	PFAM: Sodium:solute symporter family
YP_007240939.1	PFAM: Acetyltransferase (GNAT) family; NUDIX domain
YP_007240941.1	PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor RpoS; RNA polymerase sigma factor, sigma-70 family
YP_007240942.1	PFAM: Peptidase family M23; LysM domain; manually curated
YP_007240943.1	PFAM: Domain of unknown function (DUF368)
YP_007240944.1	PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase
YP_007240945.1	PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE; 5'-nucleotidase; exopolyphosphatase
YP_007240946.1	PFAM: tRNA pseudouridine synthase D (TruD); TIGRFAM: tRNA pseudouridine synthase, TruD family
YP_007240947.1	PFAM: YgbB family; TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
YP_007240948.1	PFAM: Bacterial regulatory protein, arsR family
YP_007240949.1	PFAM: NADH:flavin oxidoreductase / NADH oxidase family
YP_007240950.1	PFAM: Putative esterase; TIGRFAM: S-formylglutathione hydrolase
YP_007240951.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
YP_007240952.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_007240953.1	PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein
YP_007240955.1	PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
YP_007240956.1	PFAM: Septum formation initiator
YP_007240957.1	PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase
YP_007240958.1	PFAM: DAHP synthetase I family; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase
YP_007240959.1	PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase
YP_007240960.1	PFAM: TilS substrate C-terminal domain; PP-loop family; TilS substrate binding domain; TIGRFAM: tRNA(Ile)-lysidine synthetase, C-terminal domain; tRNA(Ile)-lysidine synthetase, N-terminal domain
YP_007240961.1	PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit
YP_007240962.1	PFAM: Bacterial DNA polymerase III alpha subunit; PHP domain; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc)
YP_007240963.1	PFAM: Ribonuclease HII
YP_007240964.1	PFAM: Lipid-A-disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase
YP_007240965.1	TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase
YP_007240966.1	PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ
YP_007240967.1	PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
YP_007240968.1	PFAM: Outer membrane protein (OmpH-like)
YP_007240969.1	PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein
YP_007240970.1	PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP
YP_007240971.1	PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase
YP_007240972.1	PFAM: Cytidylyltransferase family
YP_007240973.1	PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase
YP_007240974.1	PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor
YP_007240975.1	PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase
YP_007240976.1	PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts
YP_007240977.1	PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type
YP_007240978.1	PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I
YP_007240979.1	PFAM: GlnD PII-uridylyltransferase; HD domain; ACT domain; Nucleotidyltransferase domain; TIGRFAM: [Protein-PII] uridylyltransferase
YP_007240980.1	PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; TC 2.A.63.1.1
YP_007240981.1	PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF)
YP_007240982.1	PFAM: Na+/H+ ion antiporter subunit
YP_007240983.1	PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains
YP_007240984.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
YP_007240985.1	PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; Domain related to MnhB subunit of Na+/H+ antiporter; TIGRFAM: monovalent cation:proton antiporter
YP_007240988.1	PFAM: Pyridoxamine 5'-phosphate oxidase; Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region; TIGRFAM: pyridoxamine-phosphate oxidase
YP_007240989.1	PFAM: OmpA family
YP_007240990.1	PFAM: Beta-lactamase
YP_007240991.1	PFAM: DEAD/DEAH box helicase
YP_007240992.1	PFAM: Copper resistance protein D
YP_007240993.1	PFAM: OmpA family
YP_007240995.1	PFAM: SEC-C motif
YP_007240996.1	PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain
YP_007240997.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_007240998.1	PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_007240999.1	PFAM: EamA-like transporter family
YP_007241000.1	PFAM: DTW domain
YP_007241002.1	PFAM: XFP N-terminal domain; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
YP_007241003.1	PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain
YP_007241004.1	PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein; TIGR00730 family protein
YP_007241005.1	PFAM: RecX family; manually curated
YP_007241006.1	PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA
YP_007241007.1	PFAM: Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA C-terminal domain
YP_007241008.1	PFAM: Acyltransferase family
YP_007241009.1	PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS
YP_007241010.1	PFAM: Domain of unknown function (DUF3470)
YP_007241011.1	PFAM: CsbD-like
YP_007241012.1	PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein
YP_007241013.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2334)
YP_007241014.1	PFAM: Glycosyl transferases group 1
YP_007241015.1	PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN)
YP_007241017.1	PFAM: MBOAT family
YP_007241018.1	TIGRFAM: FkbH-like domain; HAD-superfamily phosphatase, subfamily IIIC
YP_007241019.1	PFAM: Phosphopantetheine attachment site
YP_007241021.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2219)
YP_007241022.1	PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain
YP_007241023.1	PFAM: Flavin-binding monooxygenase-like
YP_007241024.1	PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_007241025.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor
YP_007241026.1	PFAM: Bacterial regulatory proteins, tetR family
YP_007241027.1	PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_007241028.1	PFAM: Helix-turn-helix; TIGRFAM: addiction module antidote protein, HigA family
YP_007241029.1	PFAM: Uncharacterized conserved protein (DUF2081); Protein of unknown function DUF262
YP_007241032.1	TIGRFAM: DNA binding domain, excisionase family
YP_007241037.1	PFAM: Phage integrase family
YP_007241039.1	PFAM: Fic/DOC family
YP_007241040.1	PFAM: Protein of unknown function (DUF3618)
YP_007241041.1	PFAM: Protein of unknown function (DUF1469)
YP_007241043.1	PFAM: Cellulase (glycosyl hydrolase family 5)
YP_007241044.1	PFAM: Protein of unknown function (DUF2945)
YP_007241045.1	PFAM: Protein of unknown function, DUF488
YP_007241047.1	PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Pyrrolo-quinoline quinone coenzyme C-terminus; PQQ enzyme repeat; TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family
YP_007241048.1	PFAM: Glucose / Sorbosone dehydrogenase
YP_007241050.1	PFAM: S4 domain; TIGRFAM: pseudouridine synthase
YP_007241055.1	PFAM: Helicase conserved C-terminal domain; DEAD/H associated; DEAD/DEAH box helicase
YP_007241057.1	PFAM: short chain dehydrogenase
YP_007241058.1	PFAM: Protein of unknown function (DUF1264)
YP_007241059.1	PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: TIGR03440 family protein
YP_007241060.1	PFAM: Uncharacterized conserved protein (DUF2260); TIGRFAM: probable methyltransferase
YP_007241061.1	PFAM: Subtilase family
YP_007241062.1	PFAM: MarR family
YP_007241063.1	PFAM: Asparagine synthase; TIGRFAM: asparagine synthase family amidotransferase; asparagine synthase (glutamine-hydrolyzing)
YP_007241064.1	PFAM: RimK-like ATP-grasp domain; Acetyltransferase (GNAT) family; TIGRFAM: GNAT-family acetyltransferase TIGR03103
YP_007241065.1	PFAM: M42 glutamyl aminopeptidase; TIGRFAM: hydrolase, peptidase M42 family
YP_007241066.1	PFAM: 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; 7TMR-DISM extracellular 2; His Kinase A (phosphoacceptor) domain
YP_007241067.1	PFAM: Uncharacterised protein family (UPF0270)
YP_007241069.1	PFAM: Major Facilitator Superfamily; manually curated
YP_007241070.1	PFAM: short chain dehydrogenase
YP_007241071.1	PFAM: Sodium:solute symporter family; TIGRFAM: cation/acetate symporter ActP; transporter, SSS family
YP_007241072.1	PFAM: Protein of unknown function, DUF485
YP_007241073.1	PFAM: Predicted membrane protein (DUF2061)
YP_007241075.1	PFAM: VacJ like lipoprotein
YP_007241076.1	PFAM: Pirin C-terminal cupin domain; Pirin
YP_007241077.1	PFAM: Bacterial lipid A biosynthesis acyltransferase; TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase
YP_007241078.1	PFAM: Septum formation inhibitor MinC, C-terminal domain; Septum formation inhibitor MinC, N-terminal domain; TIGRFAM: septum site-determining protein MinC
YP_007241079.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: septum site-determining protein MinD
YP_007241080.1	PFAM: Septum formation topological specificity factor MinE; TIGRFAM: cell division topological specificity factor MinE
YP_007241081.1	PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family
YP_007241082.1	PFAM: Aminopeptidase I zinc metalloprotease (M18)
YP_007241083.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: putative NAD(P)H quinone oxidoreductase, PIG3 family
YP_007241084.1	PFAM: C-terminal domain of tail specific protease (DUF3340); Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc)
YP_007241086.1	PFAM: Sel1 repeat
YP_007241088.1	PFAM: Helix-turn-helix
YP_007241089.1	PFAM: Protein of unknown function (DUF1232)
YP_007241090.1	PFAM: General secretion pathway protein K; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; comEA protein
YP_007241091.1	PFAM: Bacterial flagellin N-terminal helical region; TIGRFAM: flagellar hook-associated protein 3
YP_007241092.1	PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar hook-associated protein FlgK
YP_007241093.1	PFAM: Rod binding protein; Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; TIGRFAM: flagellar rod assembly protein/muramidase FlgJ
YP_007241094.1	PFAM: Flagellar P-ring protein
YP_007241095.1	PFAM: Flagellar L-ring protein
YP_007241096.1	PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: fagellar hook-basal body proteins; flagellar basal-body rod protein FlgG, Gram-negative bacteria
YP_007241097.1	PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body proteins
YP_007241098.1	PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); Flagellar basal body protein FlaE; TIGRFAM: fagellar hook-basal body proteins
YP_007241099.1	PFAM: Flagellar hook capping protein
YP_007241100.1	PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC
YP_007241101.1	PFAM: Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgB
YP_007241102.1	PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain
YP_007241103.1	PFAM: CheW-like domain; Response regulator receiver domain
YP_007241104.1	PFAM: SAF domain; TIGRFAM: flagella basal body P-ring formation protein FlgA
YP_007241105.1	PFAM: Anti-sigma-28 factor, FlgM; TIGRFAM: flagellar biosynthesis anti-sigma factor FlgM
YP_007241106.1	PFAM: FlgN protein
YP_007241107.1	PFAM: PilZ domain
YP_007241110.1	PFAM: Arc-like DNA binding domain
YP_007241111.1	PFAM: subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit
YP_007241112.1	PFAM: HMGL-like; Biotin-requiring enzyme; Conserved carboxylase domain; TIGRFAM: oxaloacetate decarboxylase alpha subunit
YP_007241113.1	PFAM: Oxaloacetate decarboxylase, gamma chain; TIGRFAM: sodium pump decarboxylases, gamma subunit
YP_007241114.1	PFAM: MgtE intracellular N domain; CBS domain; Divalent cation transporter; TIGRFAM: Mg2+ transporter (mgtE)
YP_007241116.1	PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA)
YP_007241117.1	PFAM: ACT domain; Amino acid kinase family; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase
YP_007241118.1	PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase
YP_007241119.1	PFAM: Beta-eliminating lyase
YP_007241121.1	PFAM: Uncharacterised protein family (UPF0153)
YP_007241123.1	PFAM: YcgL domain
YP_007241124.1	PFAM: HRDC domain; 3'-5' exonuclease; TIGRFAM: ribonuclease D
YP_007241125.1	PFAM: Rhodanese-like domain
YP_007241126.1	PFAM: Outer membrane protein transport protein (OMPP1/FadL/TodX)
YP_007241127.1	PFAM: Glutathione peroxidase
YP_007241128.1	PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein
YP_007241129.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: molybdate ABC transporter, permease protein
YP_007241130.1	PFAM: ABC transporter; TOBE domain; TIGRFAM: molybdenum-pterin binding domain; molybdenum ABC transporter, ATP-binding protein
YP_007241131.1	PFAM: Endoribonuclease L-PSP
YP_007241132.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_007241133.1	PFAM: Cobalamin-5-phosphate synthase; TIGRFAM: cobalamin 5'-phosphate synthase/cobalamin synthase
YP_007241134.1	PFAM: Phosphoglycerate mutase family; TIGRFAM: alpha-ribazole phosphatase
YP_007241135.1	PFAM: Phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
YP_007241136.1	PFAM: Cobinamide kinase / cobinamide phosphate guanyltransferase
YP_007241137.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyric acid synthase CobQ
YP_007241138.1	PFAM: Aminotransferase class I and II; TIGRFAM: L-threonine-O-3-phosphate decarboxylase
YP_007241139.1	PFAM: CobD/Cbib protein; TIGRFAM: cobalamin biosynthesis protein CobD
YP_007241140.1	PFAM: Periplasmic binding protein
YP_007241141.1	PFAM: Nitroreductase family; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase
YP_007241142.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyrinic acid a,c-diamide synthase; hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing)
YP_007241143.1	PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; Cob(I)alamin adenosyltransferase N terminal; TIGRFAM: cob(I)alamin adenosyltransferase
YP_007241145.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent vitamin B12 receptor
YP_007241146.1	PFAM: Calcineurin-like phosphoesterase
YP_007241147.1	PFAM: Citrate transporter
YP_007241148.1	PFAM: NlpC/P60 family
YP_007241149.1	PFAM: NlpC/P60 family
YP_007241150.1	PFAM: Sir2 family
YP_007241151.1	PFAM: Cyd operon protein YbgE (Cyd_oper_YbgE); TIGRFAM: cyd operon protein YbgE
YP_007241152.1	PFAM: Membrane bound YbgT-like protein; TIGRFAM: cyd operon protein YbgT
YP_007241153.1	PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB)
YP_007241154.1	PFAM: Bacterial Cytochrome Ubiquinol Oxidase
YP_007241156.1	TIGRFAM: AZL_007950 family protein
YP_007241157.1	PFAM: Protein of unknown function (DUF2946)
YP_007241158.1	PFAM: Methyladenine glycosylase
YP_007241159.1	PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase
YP_007241161.1	PFAM: PP-loop family
YP_007241162.1	PFAM: DnaJ domain; DNA-J related protein
YP_007241163.1	PFAM: Protein of unknown function (DUF1282)
YP_007241164.1	PFAM: Yip1 domain
YP_007241165.1	PFAM: SprT-like family
YP_007241166.1	PFAM: Major Facilitator Superfamily
YP_007241167.1	PFAM: Periplasmic nitrate reductase protein NapE; TIGRFAM: periplasmic nitrate reductase, NapE protein
YP_007241168.1	PFAM: NapD protein
YP_007241169.1	PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: periplasmic nitrate reductase, large subunit
YP_007241170.1	PFAM: Nitrate reductase cytochrome c-type subunit (NapB)
YP_007241171.1	PFAM: NapC/NirT cytochrome c family, N-terminal region; TIGRFAM: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family
YP_007241172.1	PFAM: dUTPase; TIGRFAM: deoxycytidine triphosphate deaminase
YP_007241173.1	PFAM: 'Cold-shock' DNA-binding domain
YP_007241174.1	PFAM: ParA/MinD ATPase like; Domain of unknown function DUF59; Anion-transporting ATPase
YP_007241175.1	PFAM: tRNA synthetases class I (M); Putative tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; methionyl-tRNA synthetase
YP_007241176.1	manually curated
YP_007241177.1	PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase
YP_007241178.1	PFAM: Uncharacterised protein family (UPF0153)
YP_007241179.1	PFAM: Phage integrase family
YP_007241181.1	PFAM: Zonular occludens toxin (Zot)
YP_007241182.1	PFAM: Protein of unknown function (DUF2523)
YP_007241184.1	PFAM: Bacteriophage coat protein B
YP_007241195.1	PFAM: alpha/beta hydrolase fold; TIGRFAM: 3-oxoadipate enol-lactonase
YP_007241196.1	PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; 3-oxoadipyl-CoA thiolase
YP_007241197.1	PFAM: Coenzyme A transferase
YP_007241198.1	PFAM: Coenzyme A transferase
YP_007241199.1	PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator; TIGRFAM: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family
YP_007241200.1	PFAM: Domain of Unknown Function (DUF1206)
YP_007241201.1	PFAM: Sodium:solute symporter family; TIGRFAM: sodium/proline symporter; transporter, SSS family
YP_007241202.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain
YP_007241203.1	PFAM: Protein of unknown function (DUF3203)
YP_007241204.1	PFAM: Sodium:solute symporter family; TIGRFAM: sodium/proline symporter; transporter, SSS family
YP_007241205.1	PFAM: Proline dehydrogenase; Aldehyde dehydrogenase family; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)
YP_007241206.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_007241207.1	PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La
YP_007241208.1	PFAM: Chagasin family peptidase inhibitor I42
YP_007241210.1	PFAM: Methyltransferase domain; TIGRFAM: methyltransferase, putative
YP_007241211.1	PFAM: Protein of unknown function (DUF1698); TIGRFAM: methyltransferase, putative
YP_007241213.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_007241214.1	PFAM: Protein of unknown function (DUF2905)
YP_007241215.1	PFAM: Pyridoxal phosphate biosynthesis protein PdxJ; TIGRFAM: pyridoxine 5'-phosphate synthase
YP_007241216.1	PFAM: Recombination protein O C terminal; Recombination protein O N terminal; TIGRFAM: DNA repair protein RecO
YP_007241217.1	PFAM: GTPase of unknown function; KH domain; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain
YP_007241218.1	PFAM: RNase3 domain; Double-stranded RNA binding motif; TIGRFAM: ribonuclease III, bacterial; manually curated
YP_007241220.1	PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type
YP_007241221.1	PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain
YP_007241222.1	PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family
YP_007241223.1	PFAM: Positive regulator of sigma(E), RseC/MucC
YP_007241224.1	PFAM: MucB/RseB family
YP_007241225.1	PFAM: Anti sigma-E protein RseA, C-terminal domain; Anti sigma-E protein RseA, N-terminal domain
YP_007241226.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoE
YP_007241227.1	PFAM: domain; FAD binding domain; TIGRFAM: L-aspartate oxidase
YP_007241228.1	manually curated
YP_007241229.1	PFAM: Protein of unknown function (DUF339)
YP_007241230.1	PFAM: Aminomethyltransferase folate-binding domain; TIGRFAM: folate-binding protein YgfZ
YP_007241231.1	PFAM: HDOD domain
YP_007241233.1	PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase
YP_007241234.1	PFAM: Receptor family ligand binding region
YP_007241235.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_007241236.1	PFAM: Enoyl-CoA hydratase/isomerase family
YP_007241238.1	PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit
YP_007241239.1	PFAM: Putative Fe-S cluster; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit
YP_007241240.1	PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit
YP_007241241.1	PFAM: NQR2, RnfD, RnfE family; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit
YP_007241242.1	PFAM: FMN-binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, G subunit
YP_007241243.1	PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit
YP_007241244.1	PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: endonuclease III
YP_007241246.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: lactoylglutathione lyase
YP_007241247.1	PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase
YP_007241248.1	PFAM: OmpA family
YP_007241249.1	PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, homodimeric type
YP_007241250.1	PFAM: Exonuclease; TIGRFAM: ribonuclease T
YP_007241251.1	PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase
YP_007241252.1	PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain; ACT domain
YP_007241253.1	PFAM: Glutathione-dependent formaldehyde-activating enzyme
YP_007241254.1	PFAM: Disulfide bond isomerase protein N-terminus
YP_007241255.1	PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerD
YP_007241256.1	PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type
YP_007241257.1	PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase
YP_007241258.1	PFAM: PRC-barrel domain; RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM
YP_007241259.1	PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16
YP_007241260.1	PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein
YP_007241261.1	PFAM: Cytochrome C assembly protein
YP_007241262.1	PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain
YP_007241263.1	PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylglycinamide formyltransferase 2
YP_007241264.1	PFAM: Protein of unknown function (DUF1289)
YP_007241266.1	PFAM: NUDIX domain
YP_007241267.1	PFAM: NUDIX domain
YP_007241268.1	PFAM: L,D-transpeptidase catalytic domain
YP_007241270.1	PFAM: Phage integrase family
YP_007241281.1	PFAM: Resolvase, N terminal domain
YP_007241284.1	PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase, single chain form
YP_007241285.1	PFAM: ABC transporter
YP_007241286.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_007241287.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_007241288.1	PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: lysine-arginine-ornithine-binding periplasmic protein
YP_007241289.1	PFAM: Phospholipase/Carboxylesterase
YP_007241290.1	PFAM: GGDEF domain; Cyclic nucleotide-binding domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_007241291.1	PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase
YP_007241293.1	PFAM: MoaE protein
YP_007241294.1	PFAM: ThiS family; TIGRFAM: molybdopterin converting factor, subunit 1, non-archaeal
YP_007241295.1	PFAM: MoaC family; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC
YP_007241296.1	PFAM: PhoH-like protein
YP_007241297.1	PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter
YP_007241298.1	PFAM: Protein of unknown function (DUF328)
YP_007241299.1	PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
YP_007241301.1	PFAM: Bacterial protein of unknown function (DUF853)
YP_007241303.1	PFAM: ACT domain; Formyl transferase; TIGRFAM: formyltetrahydrofolate deformylase
YP_007241305.1	PFAM: Exonuclease; Exonuclease C-terminal
YP_007241306.1	PFAM: RDD family
YP_007241307.1	PFAM: Integral membrane protein DUF95
YP_007241310.1	PFAM: ATPase family associated with various cellular activities (AAA)
YP_007241311.1	PFAM: Protein of unknown function DUF58
YP_007241315.1	PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase
YP_007241316.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain
YP_007241317.1	PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_007241318.1	PFAM: Fumarase C-terminus; Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region; hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
YP_007241319.1	PFAM: Uncharacterized conserved protein (DUF2132)
YP_007241320.1	PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease, PfpI family
YP_007241324.1	PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases
YP_007241325.1	PFAM: Protein of unknown function, DUF479; manually curated
YP_007241326.1	PFAM: Class II Aldolase and Adducin N-terminal domain
YP_007241327.1	PFAM: Flavodoxin
YP_007241329.1	PFAM: short chain dehydrogenase
YP_007241330.1	PFAM: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain
YP_007241331.1	PFAM: Protein of unknown function (DUF1244)
YP_007241332.1	PFAM: HopJ type III effector protein
YP_007241333.1	PFAM: Protein of unknown function (DUF540)
YP_007241334.1	PFAM: NADH:flavin oxidoreductase / NADH oxidase family
YP_007241335.1	PFAM: Bacterial regulatory proteins, tetR family
YP_007241336.1	PFAM: Glutathione peroxidase
YP_007241337.1	PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase
YP_007241338.1	PFAM: Acetokinase family; TIGRFAM: acetate kinase
YP_007241339.1	PFAM: DRTGG domain; Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate acetyltransferase
YP_007241340.1	PFAM: Acyltransferase
YP_007241341.1	PFAM: EAL domain; Response regulator receiver domain; GGDEF domain; PAS fold; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_007241342.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; CHASE domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_007241343.1	PFAM: OmpA family
YP_007241344.1	PFAM: Metallo-beta-lactamase superfamily
YP_007241345.1	PFAM: AMP-binding enzyme
YP_007241346.1	PFAM: LysE type translocator; TIGRFAM: The Resistance to Homoserine/Threonine (RhtB) Family protein
YP_007241347.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_007241348.1	PFAM: Methyltransferase small domain; Methyltransferase small domain N-terminal
YP_007241349.1	PFAM: Uncharacterized protein family UPF0016
YP_007241350.1	PFAM: SnoaL-like polyketide cyclase; TIGRFAM: conserved hypothetical protein, steroid delta-isomerase-related
YP_007241351.1	PFAM: Peptidase family M48
YP_007241352.1	PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_007241353.1	PFAM: Uncharacterised ACR, COG2135
YP_007241356.1	PFAM: Acyltransferase
YP_007241357.1	PFAM: Protein of unknown function (DUF1329)
YP_007241360.1	PFAM: Malate:quinone oxidoreductase (Mqo); TIGRFAM: malate:quinone-oxidoreductase
YP_007241362.1	PFAM: Sulfate transporter family; STAS domain; TIGRFAM: high affinity sulphate transporter 1
YP_007241363.1	PFAM: short chain dehydrogenase
YP_007241365.1	PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein; TIGR00730 family protein
YP_007241366.1	PFAM: Protein of unknown function (DUF2726)
YP_007241367.1	PFAM: Calcium/calmodulin dependent protein kinase II Association; TIGRFAM: conserved hypothetical protein
YP_007241368.1	PFAM: Protein of unknown function (DUF2914)
YP_007241369.1	PFAM: MgtC family
YP_007241370.1	PFAM: Glucose / Sorbosone dehydrogenase; Membrane bound L-sorbosone dehydrogenase
YP_007241371.1	PFAM: SmpA / OmlA family
YP_007241372.1	PFAM: Rho termination factor, N-terminal domain
YP_007241374.1	PFAM: Ferritin-like domain
YP_007241375.1	PFAM: UDP-3-O-acyl N-acetylglycosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase
YP_007241376.1	PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ
YP_007241377.1	PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA
YP_007241378.1	PFAM: Cell division protein FtsQ; POTRA domain, FtsQ-type
YP_007241379.1	PFAM: D-ala D-ala ligase C-terminus; D-ala D-ala ligase N-terminus; TIGRFAM: D-alanine--D-alanine ligase
YP_007241380.1	PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate--alanine ligase
YP_007241381.1	PFAM: Glycosyltransferase family 28 N-terminal domain; Glycosyltransferase family 28 C-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
YP_007241382.1	PFAM: Cell cycle protein; TIGRFAM: cell division protein FtsW
YP_007241383.1	PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase
YP_007241384.1	PFAM: Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1; Glycosyl transferase family 4; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase
YP_007241385.1	PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
YP_007241386.1	PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase
YP_007241387.1	PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain
YP_007241388.1	PFAM: Cell division protein FtsL; TIGRFAM: cell division protein FtsL
YP_007241389.1	PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW
YP_007241390.1	PFAM: MraZ protein; TIGRFAM: mraZ protein; manually curated
YP_007241391.1	PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family
YP_007241392.1	PFAM: LppC putative lipoprotein
YP_007241393.1	PFAM: Uncharacterised protein family UPF0102; TIGRFAM: TIGR00252 family protein
YP_007241394.1	PFAM: SIS domain; TIGRFAM: phosphoheptose isomerase
YP_007241395.1	PFAM: Putative phospholipid-binding domain
YP_007241396.1	PFAM: Stringent starvation protein B
YP_007241397.1	PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain
YP_007241398.1	PFAM: Cytochrome C1 family
YP_007241399.1	PFAM: Cytochrome b(N-terminal)/b6/petB; Cytochrome b(C-terminal)/b6/petD
YP_007241400.1	PFAM: Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal; Rieske [2Fe-2S] domain; TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit
YP_007241401.1	PFAM: Ribosomal protein S9/S16
YP_007241402.1	PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type
YP_007241403.1	PFAM: Aldo/keto reductase family
YP_007241404.1	PFAM: Cobalt uptake substrate-specific transmembrane region
YP_007241405.1	PFAM: Domain of unknown function (DUF329)
YP_007241406.1	PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase
YP_007241407.1	PFAM: Bacterial Peptidase A24 N-terminal domain; Type IV leader peptidase family
YP_007241408.1	PFAM: Bacterial type II secretion system protein F domain
YP_007241409.1	PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain; TIGRFAM: type IV-A pilus assembly ATPase PilB
YP_007241410.1	PFAM: Prokaryotic N-terminal methylation motif; Pilin (bacterial filament); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_007241411.1	PFAM: Prokaryotic N-terminal methylation motif; Pilin (bacterial filament); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_007241412.1	PFAM: O-Antigen ligase
YP_007241414.1	PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; Adenylylsulphate kinase; TIGRFAM: adenylylsulfate kinase (apsK); sulfate adenylyltransferase, large subunit; small GTP-binding protein domain; sulfate adenylyltransferase subunit 1
YP_007241415.1	PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: sulfate adenylyltransferase, small subunit
YP_007241416.1	PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family
YP_007241417.1	PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family; periplasmic serine pepetdase DegS
YP_007241418.1	PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase
YP_007241419.1	PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase
YP_007241420.1	PFAM: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase
YP_007241421.1	PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase
YP_007241422.1	PFAM: BolA-like protein
YP_007241423.1	PFAM: Phosphate-starvation-inducible E
YP_007241424.1	PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor
YP_007241425.1	PFAM: Toluene tolerance, Ttg2
YP_007241426.1	PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein
YP_007241427.1	PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein
YP_007241428.1	PFAM: ABC transporter
YP_007241429.1	PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein
YP_007241430.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family
YP_007241431.1	PFAM: Protein of unknown function (DUF1239)
YP_007241432.1	PFAM: OstA-like protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA
YP_007241433.1	PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter
YP_007241434.1	PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54 factor, core binding domain; Sigma-54, DNA binding domain; TIGRFAM: RNA polymerase sigma-54 factor
YP_007241435.1	PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein
YP_007241436.1	PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN
YP_007241437.1	PFAM: P-loop ATPase protein family
YP_007241438.1	PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family
YP_007241439.1	PFAM: Putative modulator of DNA gyrase
YP_007241440.1	PFAM: Protein of unknown function (DUF615)
YP_007241441.1	PFAM: Putative modulator of DNA gyrase
YP_007241442.1	PFAM: Carbon-nitrogen hydrolase
YP_007241443.1	TIGRFAM: TIGR02099 family protein
YP_007241444.1	PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family
YP_007241445.1	PFAM: Maf-like protein; TIGRFAM: MAF protein
YP_007241446.1	PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD
YP_007241447.1	PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC
YP_007241448.1	PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family
YP_007241449.1	PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit
YP_007241450.1	PFAM: Amidase; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit
YP_007241451.1	PFAM: GatB/GatE catalytic domain; GatB domain; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit
YP_007241452.1	PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; TIGRFAM: rare lipoprotein A
YP_007241453.1	PFAM: Sodium/calcium exchanger protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger related-protein
YP_007241454.1	PFAM: Sodium/calcium exchanger protein; TIGRFAM: calcium/proton exchanger (cax); K+-dependent Na+/Ca+ exchanger related-protein
YP_007241455.1	PFAM: Protein of unknown function, DUF583
YP_007241456.1	PFAM: Peptidase family M23
YP_007241457.1	PFAM: Membrane transport protein
YP_007241458.1	PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family
YP_007241459.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_007241460.1	PFAM: Protein of unknown function (DUF541)
YP_007241461.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor
YP_007241462.1	PFAM: PepSY-associated TM helix
YP_007241463.1	PFAM: Predicted periplasmic protein (DUF2271)
YP_007241464.1	PFAM: Nickel uptake substrate-specific transmembrane region
YP_007241465.1	PFAM: Flavodoxin; Oxidoreductase NAD-binding domain; manually curated; non-canonical start codon
YP_007241466.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor
YP_007241467.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor
YP_007241468.1	PFAM: 2OG-Fe(II) oxygenase superfamily
YP_007241469.1	PFAM: Sel1 repeat
YP_007241470.1	PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain
YP_007241471.1	PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; peptide chain release factor 3
YP_007241472.1	PFAM: Prokaryotic dksA/traR C4-type zinc finger
YP_007241473.1	PFAM: Phosphotransferase system, EIIC; PTS system, Lactose/Cellobiose specific IIB subunit; TIGRFAM: PTS system, fructose-specific, IIB component; PTS system, fructose subfamily, IIC component; TC 4.A.2.1.1
YP_007241474.1	PFAM: pfkB family carbohydrate kinase; TIGRFAM: 1-phosphofructokinase; hexose kinase, 1-phosphofructokinase family
YP_007241475.1	PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; PTS HPr component phosphorylation site; PEP-utilising enzyme, N-terminal; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; TIGRFAM: Phosphotransferase System HPr (HPr) Family; phosphoenolpyruvate-protein phosphotransferase
YP_007241476.1	PFAM: Bacterial regulatory proteins, lacI family; family; TIGRFAM: D-fructose-responsive transcription factor
YP_007241477.1	PFAM: MazG nucleotide pyrophosphohydrolase domain
YP_007241478.1	PFAM: Methyltransferase domain
YP_007241481.1	PFAM: Protein of unknown function, DUF606
YP_007241482.1	PFAM: SdiA-regulated
YP_007241484.1	PFAM: MatE; TIGRFAM: putative efflux protein, MATE family
YP_007241485.1	PFAM: Predicted membrane protein (DUF2214)
YP_007241486.1	PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: arginine decarboxylase, biosynthetic
YP_007241487.1	PFAM: Translation initiation factor SUI1; TIGRFAM: translation initation factor SUI1, putative, prokaryotic
YP_007241488.1	PFAM: FAD dependent oxidoreductase; TIGRFAM: glycine oxidase ThiO
YP_007241489.1	PFAM: Prokaryotic N-terminal methylation motif; Type II transport protein GspH; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; manually curated
YP_007241490.1	PFAM: Prokaryotic N-terminal methylation motif; Type II transport protein GspH; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_007241491.1	TIGRFAM: type IV pilus modification protein PilV; prepilin-type N-terminal cleavage/methylation domain
YP_007241494.1	PFAM: Neisseria PilC protein
YP_007241495.1	PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_007241496.1	PFAM: LytB protein; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming)
YP_007241497.1	PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase
YP_007241498.1	PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase
YP_007241499.1	PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Zinc finger found in FPG and IleRS; TIGRFAM: isoleucyl-tRNA synthetase
YP_007241500.1	PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase
YP_007241501.1	PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN
YP_007241502.1	PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20
YP_007241503.1	PFAM: CreA protein
YP_007241504.1	PFAM: Amino acid kinase family; PUA domain; TIGRFAM: glutamate 5-kinase
YP_007241505.1	PFAM: GTPase of unknown function; GTP1/OBG; TIGRFAM: Obg family GTPase CgtA
YP_007241506.1	PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27
YP_007241507.1	PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21
YP_007241508.1	PFAM: Polyprenyl synthetase
YP_007241510.1	PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
YP_007241511.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2256); manually curated
YP_007241512.1	PFAM: Deoxyribodipyrimidine photo-lyase-related protein
YP_007241514.1	PFAM: Uncharacterized protein family, UPF0114; TIGRFAM: TIGR00645 family protein
YP_007241516.1	PFAM: Lon protease (S16) C-terminal proteolytic domain
YP_007241517.1	PFAM: Cytochrome c; Di-haem cytochrome c peroxidase
YP_007241518.1	PFAM: Large-conductance mechanosensitive channel, MscL; TIGRFAM: large conductance mechanosensitive channel protein
YP_007241519.1	PFAM: Protein of unknown function (DUF465)
YP_007241520.1	PFAM: Copper resistance protein D
YP_007241521.1	PFAM: KaiC; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: DNA repair protein RadA
YP_007241522.1	PFAM: PilZ domain
YP_007241523.1	PFAM: Protein of unknown function (DUF1295)
YP_007241524.1	PFAM: Serine hydroxymethyltransferase
YP_007241525.1	PFAM: N-6 DNA Methylase; HsdM N-terminal domain
YP_007241526.1	PFAM: Type I restriction modification DNA specificity domain; manually curated
YP_007241527.1	PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit
YP_007241528.1	PFAM: Helix-turn-helix
YP_007241530.1	PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit
YP_007241531.1	PFAM: Integrase core domain
YP_007241532.1	PFAM: Transposase
YP_007241536.1	PFAM: ATPase family associated with various cellular activities (AAA)
YP_007241538.1	PFAM: 2'-5'-oligoadenylate synthetase 1, domain 2, C-terminus; Nucleotidyltransferase domain
YP_007241539.1	PFAM: Helix-turn-helix
YP_007241540.1	PFAM: Domain of unknown function (DUF955)
YP_007241543.1	PFAM: Phage integrase family
YP_007241544.1	PFAM: Uncharacterized protein family, UPF0114
YP_007241545.1	PFAM: Acetyltransferase (GNAT) family
YP_007241547.1	PFAM: Transposase DDE domain; Transposase domain (DUF772)
YP_007241550.1	PFAM: Phage integrase family
YP_007241551.1	PFAM: Phage integrase family
YP_007241552.1	PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family
YP_007241553.1	PFAM: HAMP domain; Stage II sporulation protein E (SpoIIE)
YP_007241555.1	PFAM: Domain of unknown function (DUF1987)
YP_007241556.1	PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_007241557.1	PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
YP_007241558.1	PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain
YP_007241559.1	PFAM: Methyltransferase small domain
YP_007241561.1	PFAM: Beta-lactamase
YP_007241562.1	PFAM: Acyltransferase family
YP_007241563.1	PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
YP_007241564.1	PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain
YP_007241565.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain
YP_007241567.1	PFAM: XdhC and CoxI family
YP_007241568.1	PFAM: DJ-1/PfpI family; TIGRFAM: DJ-1 family protein
YP_007241569.1	PFAM: Permease family
YP_007241570.1	PFAM: tRNA (Uracil-5-)-methyltransferase; TIGRFAM: tRNA (uracil-5-)-methyltransferase
YP_007241571.1	PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain
YP_007241572.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Prokaryotic cytochrome b561; Oxidoreductase NAD-binding domain
YP_007241573.1	PFAM: Domain of unknown function (DUF1924)
YP_007241574.1	PFAM: Dihaem cytochrome c
YP_007241575.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_007241579.1	PFAM: Sulfatase
YP_007241580.1	PFAM: Prokaryotic diacylglycerol kinase
YP_007241581.1	PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family
YP_007241582.1	PFAM: Methyltransferase domain
YP_007241583.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_007241584.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_007241585.1	PFAM: Sulfatase
YP_007241586.1	PFAM: PAP2 superfamily
YP_007241588.1	PFAM: SdiA-regulated
YP_007241589.1	PFAM: Protein of unknown function (DUF1232)
YP_007241590.1	PFAM: Thermostable hemolysin
YP_007241591.1	PFAM: AMP-binding enzyme
YP_007241593.1	PFAM: short chain dehydrogenase
YP_007241595.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_007241596.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_007241597.1	PFAM: Cytochrome b(N-terminal)/b6/petB
YP_007241598.1	PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain
YP_007241599.1	PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor biosynthesis protein B, proteobacterial; molybdenum cofactor synthesis domain
YP_007241600.1	PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial
YP_007241601.1	PFAM: PPIC-type PPIASE domain
YP_007241602.1	PFAM: Nitrate reductase gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit
YP_007241603.1	PFAM: Nitrate reductase delta subunit; TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone
YP_007241604.1	TIGRFAM: nitrate reductase, beta subunit
YP_007241605.1	PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: respiratory nitrate reductase, alpha subunit
YP_007241606.1	PFAM: Major Facilitator Superfamily; TIGRFAM: nitrite extrusion protein (nitrite facilitator)
YP_007241607.1	PFAM: Universal stress protein family
YP_007241608.1	TIGRFAM: nitrite extrusion protein (nitrite facilitator)
YP_007241609.1	PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_007241610.1	PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_007241612.1	PFAM: Cyclic nucleotide-binding domain
YP_007241614.1	PFAM: Cyclic nucleotide-binding domain
YP_007241615.1	PFAM: Protein of unknown function, DUF
YP_007241616.1	PFAM: Putative neutral zinc metallopeptidase
YP_007241617.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
YP_007241618.1	PFAM: Acyl-CoA thioesterase; TIGRFAM: acyl-CoA thioesterase II
YP_007241620.1	PFAM: Histone deacetylase domain
YP_007241621.1	PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family; uncharacterized flavoprotein, PP_4765 family
YP_007241623.1	PFAM: Acyltransferase family
YP_007241624.1	PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase
YP_007241625.1	PFAM: TrkA-N domain; Sodium/hydrogen exchanger family
YP_007241626.1	PFAM: EAL domain
YP_007241627.1	PFAM: DJ-1/PfpI family
YP_007241628.1	PFAM: HAMP domain; Cache domain; Vibrio chemotaxis protein N terminus; Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_007241629.1	PFAM: Sodium:neurotransmitter symporter family
YP_007241630.1	PFAM: Glutathione S-transferase, N-terminal domain; TIGRFAM: maleylacetoacetate isomerase
YP_007241631.1	PFAM: Fumarylacetoacetate (FAA) hydrolase family
YP_007241632.1	PFAM: homogentisate 1,2-dioxygenase; TIGRFAM: homogentisate 1,2-dioxygenase
YP_007241633.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase
YP_007241634.1	PFAM: Sodium:neurotransmitter symporter family
YP_007241635.1	PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
YP_007241636.1	PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase
YP_007241637.1	PFAM: HTH domain; AsnC family
YP_007241638.1	PFAM: Uncharacterized ACR, COG1430
YP_007241639.1	PFAM: Short chain fatty acid transporter; TIGRFAM: TIGR00366 family protein
YP_007241640.1	PFAM: Citrate transporter
YP_007241641.1	PFAM: short chain dehydrogenase; TIGRFAM: 3-hydroxybutyrate dehydrogenase
YP_007241642.1	PFAM: Pyrimidine nucleoside phosphorylase C-terminal domain; Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: putative thymidine phosphorylase
YP_007241643.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase
YP_007241644.1	PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain
YP_007241645.1	PFAM: Short chain fatty acid transporter; TIGRFAM: TIGR00366 family protein
YP_007241646.1	PFAM: RNA pseudouridylate synthase
YP_007241648.1	PFAM: Bacterial protein of unknown function (DUF899)
YP_007241649.1	PFAM: Copper binding periplasmic protein CusF
YP_007241650.1	PFAM: Peptidase propeptide and YPEB domain
YP_007241651.1	PFAM: Peptidase propeptide and YPEB domain
YP_007241652.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_007241653.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_007241658.1	PFAM: Calcineurin-like phosphoesterase; Type 5 capsule protein repressor C terminal; TIGRFAM: exonuclease SbcD
YP_007241659.1	TIGRFAM: exonuclease SbcC
YP_007241660.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent vitamin B12 receptor
YP_007241661.1	PFAM: Periplasmic binding protein
YP_007241663.1	PFAM: GTP cyclohydrolase II; TIGRFAM: GTP cyclohydrolase II
YP_007241664.1	PFAM: Retroviral aspartyl protease; TIGRFAM: clan AA aspartic protease, TIGR02281 family
YP_007241665.1	PFAM: Phosphatidylglycerophosphatase A
YP_007241666.1	PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: thiamine-monophosphate kinase
YP_007241667.1	PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB
YP_007241668.1	PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase
YP_007241669.1	PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase
YP_007241670.1	PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit
YP_007241671.1	PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD; diaminohydroxyphosphoribosylaminopyrimidine deaminase
YP_007241672.1	PFAM: ATP cone domain; TIGRFAM: transcriptional regulator NrdR
YP_007241674.1	PFAM: Ribosomal protein L11 methyltransferase (PrmA)
YP_007241675.1	PFAM: 2',5' RNA ligase family; TIGRFAM: 2'-5' RNA ligase
YP_007241676.1	PFAM: SirA-like protein
YP_007241677.1	PFAM: YeeE/YedE family (DUF395)
YP_007241678.1	PFAM: Thioredoxin; TIGRFAM: thioredoxin
YP_007241680.1	PFAM: Protein of unknown function (DUF2796)
YP_007241681.1	PFAM: ABC transporter
YP_007241682.1	PFAM: Predicted permease
YP_007241683.1	PFAM: Protein of unknown function (DUF3299)
YP_007241685.1	PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain
YP_007241686.1	PFAM: Biopolymer transport protein ExbD/TolR
YP_007241687.1	PFAM: MotA/TolQ/ExbB proton channel family
YP_007241688.1	PFAM: MotA/TolQ/ExbB proton channel family
YP_007241689.1	PFAM: Protein of unknown function (DUF3450)
YP_007241690.1	PFAM: OmpW family
YP_007241691.1	PFAM: NAD dependent epimerase/dehydratase family
YP_007241692.1	PFAM: RmlD substrate binding domain; TIGRFAM: dTDP-4-dehydrorhamnose reductase
YP_007241693.1	PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb)
YP_007241694.1	PFAM: Major Facilitator Superfamily
YP_007241695.1	PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit
YP_007241696.1	PFAM: Zinc carboxypeptidase
YP_007241697.1	PFAM: Catalase; Catalase-related immune-responsive
YP_007241698.1	PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17
YP_007241699.1	PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type
YP_007241700.1	PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type
YP_007241701.1	PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11
YP_007241702.1	PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13; manually curated
YP_007241703.1	PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type
YP_007241704.1	PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit
YP_007241705.1	PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle
YP_007241706.1	PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle
YP_007241707.1	PFAM: Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type
YP_007241708.1	PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type
YP_007241709.1	PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type
YP_007241710.1	PFAM: Ribosomal protein S8
YP_007241711.1	PFAM: Ribosomal protein S14p/S29e
YP_007241712.1	PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5
YP_007241713.1	PFAM: KOW motif; TIGRFAM: ribosomal protein L24, bacterial/organelle
YP_007241714.1	PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle
YP_007241715.1	PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17
YP_007241716.1	PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29
YP_007241717.1	PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle
YP_007241718.1	PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type; ribosomal protein S3, eukaryotic/archaeal type
YP_007241719.1	PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type
YP_007241720.1	PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle
YP_007241721.1	PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar
YP_007241722.1	PFAM: Ribosomal protein L23
YP_007241723.1	PFAM: Ribosomal protein L4/L1 family; TIGRFAM: 50S ribosomal protein L4, bacterial/organelle
YP_007241724.1	PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial
YP_007241725.1	PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle
YP_007241726.1	PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU
YP_007241727.1	PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain
YP_007241728.1	PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle
YP_007241729.1	PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle
YP_007241730.1	PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 5; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form
YP_007241731.1	PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit
YP_007241732.1	PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12
YP_007241733.1	PFAM: Ribosomal protein L10
YP_007241734.1	PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast
YP_007241735.1	PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11
YP_007241736.1	PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG
YP_007241737.1	PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial
YP_007241738.1	PFAM: Elongation factor Tu C-terminal domain; Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU
YP_007241740.1	PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III
YP_007241741.1	PFAM: HTH domain; Biotin/lipoate A/B protein ligase family; TIGRFAM: BirA biotin operon repressor domain; birA, biotin-[acetyl-CoA-carboxylase] ligase region; manually curated
YP_007241743.1	PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase
YP_007241744.1	PFAM: Opacity-associated protein A LysM-like domain; Peptidase family M23
YP_007241745.1	PFAM: Uncharacterised protein family (UPF0075)
YP_007241746.1	PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein
YP_007241747.1	PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form
YP_007241748.1	PFAM: Uncharacterised protein family (UPF0093); TIGRFAM: TIGR00701 family protein
YP_007241749.1	PFAM: Protein of unknown function (DUF805)
YP_007241750.1	PFAM: ATPase family associated with various cellular activities (AAA)
YP_007241751.1	PFAM: HIT domain
YP_007241752.1	PFAM: Ubiquinone biosynthesis protein COQ7
YP_007241753.1	PFAM: OsmC-like protein
YP_007241754.1	PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain
YP_007241755.1	PFAM: Indole-3-glycerol phosphate synthase
YP_007241756.1	PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase
YP_007241757.1	PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase
YP_007241758.1	PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: anthranilate synthase component I, non-proteobacterial lineages
YP_007241759.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; 2-phosphoglycolate phosphatase, prokaryotic
YP_007241760.1	PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase
YP_007241761.1	PFAM: Aminotransferase class-III; TIGRFAM: 4-aminobutyrate aminotransferase, prokaryotic type
YP_007241762.1	PFAM: Aldehyde dehydrogenase family; TIGRFAM: succinate-semialdehyde dehydrogenase
YP_007241763.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_007241764.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_007241765.1	PFAM: Bacterial extracellular solute-binding protein
YP_007241766.1	PFAM: ABC transporter; TOBE domain; TIGRFAM: spermidine/putrescine ABC transporter ATP-binding subunit
YP_007241767.1	PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_007241768.1	PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Bacterial extracellular solute-binding proteins, family 3; PAS fold; TIGRFAM: PAS domain S-box
YP_007241769.1	PFAM: Protein of unknown function (DUF3530)
YP_007241770.1	PFAM: DnaJ domain; Tellurite resistance protein TerB
YP_007241771.1	PFAM: Nucleotidyl transferase
YP_007241772.1	PFAM: Phosphotransferase enzyme family
YP_007241773.1	PFAM: Organic solvent tolerance protein; OstA-like protein
YP_007241774.1	PFAM: SurA N-terminal domain; PPIC-type PPIASE domain
YP_007241775.1	PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase
YP_007241776.1	PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase
YP_007241777.1	PFAM: Protein of unknown function (DUF525)
YP_007241778.1	PFAM: Calcineurin-like phosphoesterase; TIGRFAM: bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
YP_007241779.1	PFAM: Rhodanese-like domain
YP_007241780.1	PFAM: PrkA AAA domain; PrkA serine protein kinase C-terminal domain
YP_007241781.1	PFAM: Protein of unknown function (DUF444)
YP_007241782.1	PFAM: SpoVR like protein
YP_007241783.1	PFAM: Poly A polymerase head domain
YP_007241784.1	PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
YP_007241785.1	PFAM: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain
YP_007241786.1	PFAM: Domain of unknown function (DUF205); TIGRFAM: acyl-phosphate glycerol 3-phosphate acyltransferase
YP_007241787.1	PFAM: Glycoprotease family; TIGRFAM: putative glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family
YP_007241788.1	PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21
YP_007241789.1	PFAM: Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; DNA primase DnaG DnaB-binding; DnaB-helicase binding domain of primase; TIGRFAM: DNA primase, catalytic core
YP_007241790.1	PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 factor, region 1.1; Sigma-70, non-essential region; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain
YP_007241791.1	PFAM: Citrate transporter; TrkA-C domain
YP_007241792.1	PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase
YP_007241793.1	PFAM: Thioredoxin; TIGRFAM: thioredoxin
YP_007241795.1	PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases
YP_007241796.1	PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein
YP_007241797.1	PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein
YP_007241799.1	PFAM: FabA-like domain; AMP-binding enzyme
YP_007241800.1	PFAM: Glycosyl transferase family 2
YP_007241801.1	PFAM: Bacterial lipid A biosynthesis acyltransferase
YP_007241802.1	PFAM: Phenylalanine and histidine ammonia-lyase; TIGRFAM: phenylalanine ammonia-lyase
YP_007241803.1	PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family
YP_007241804.1	PFAM: Outer membrane lipoprotein carrier protein LolA
YP_007241806.1	PFAM: FAD binding domain
YP_007241808.1	PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain
YP_007241810.1	PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase, putative
YP_007241811.1	PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain
YP_007241814.1	PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family
YP_007241815.1	PFAM: Major Facilitator Superfamily
YP_007241816.1	PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: uroporphyrinogen decarboxylase
YP_007241817.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthase small subunit family protein, proteobacterial
YP_007241818.1	PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II
YP_007241819.1	PFAM: Sporulation related domain
YP_007241820.1	PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase
YP_007241821.1	PFAM: Shikimate kinase
YP_007241822.1	PFAM: Bacterial type II/III secretion system short domain; Secretin and TonB N terminus short domain; Bacterial type II and III secretion system protein; TIGRFAM: type IV pilus secretin (or competence protein) PilQ
YP_007241823.1	PFAM: Pilus assembly protein, PilP
YP_007241824.1	PFAM: Pilus assembly protein, PilO
YP_007241825.1	PFAM: Fimbrial assembly protein (PilN)
YP_007241826.1	PFAM: Competence protein A; TIGRFAM: type IV pilus assembly protein PilM
YP_007241827.1	PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family
YP_007241828.1	PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain
YP_007241829.1	PFAM: Staphylococcal nuclease homologue
YP_007241830.1	PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31
YP_007241831.1	PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: primosomal protein N'
YP_007241832.1	PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase
YP_007241833.1	PFAM: Sporulation related domain
YP_007241834.1	PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain
YP_007241835.1	PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: UbiD family decarboxylases
YP_007241836.1	PFAM: Rho termination factor, N-terminal domain; Rho termination factor, RNA-binding domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: transcription termination factor Rho
YP_007241837.1	PFAM: Thioredoxin; TIGRFAM: thioredoxin; manually curated
YP_007241838.1	PFAM: Ppx/GppA phosphatase family; TIGRFAM: exopolyphosphatase
YP_007241839.1	PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1
YP_007241840.1	PFAM: Delta-aminolevulinic acid dehydratase
YP_007241841.1	PFAM: DJ-1/PfpI family
YP_007241842.1	PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1
YP_007241843.1	PFAM: Uncharacterized BCR, YaiI/YqxD family COG1671
YP_007241844.1	PFAM: LysE type translocator
YP_007241845.1	PFAM: Mechanosensitive ion channel
YP_007241846.1	PFAM: ABC transporter
YP_007241847.1	PFAM: Protein of unknown function (DUF2390); TIGRFAM: TIGR02444 family protein
YP_007241849.1	PFAM: Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ
YP_007241850.1	PFAM: Disulfide bond formation protein DsbB
YP_007241851.1	PFAM: HemY protein N-terminus; TIGRFAM: hemY protein
YP_007241852.1	PFAM: HemX
YP_007241853.1	PFAM: Uroporphyrinogen-III synthase HemD
YP_007241854.1	PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase
YP_007241855.1	PFAM: Response regulator receiver domain; LytTr DNA-binding domain
YP_007241856.1	PFAM: Histidine kinase
YP_007241857.1	PFAM: Lyase; TIGRFAM: argininosuccinate lyase
YP_007241859.1	PFAM: Acetyltransferase (GNAT) family
YP_007241860.1	PFAM: NnrS protein
YP_007241863.1	PFAM: Phosphate-starvation-inducible E; TIGRFAM: TIGR02647 family protein
YP_007241864.1	PFAM: Adenylate cyclase, class-I
YP_007241865.1	PFAM: Sigma-70, region 4
YP_007241866.1	PFAM: Transcription elongation factor, GreA/GreB, C-term
YP_007241867.1	PFAM: Frataxin-like domain; TIGRFAM: iron donor protein CyaY
YP_007241869.1	PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase
YP_007241870.1	PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase
YP_007241871.1	PFAM: Protein of unknown function, DUF484
YP_007241872.1	PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerC
YP_007241873.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
YP_007241875.1	PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme
YP_007241876.1	PFAM: Ammonium Transporter Family; TIGRFAM: probable ammonium transporter, marine subtype; ammonium transporter; TC 1.A.11
YP_007241877.1	PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter; TC 1.A.11
YP_007241878.1	PFAM: Nitrogen regulatory protein P-II
YP_007241879.1	PFAM: Protein of unknown function (DUF526)
YP_007241880.1	PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein
YP_007241881.1	PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport
YP_007241882.1	PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_007241883.1	PFAM: UvrD/REP helicase; TIGRFAM: ATP-dependent DNA helicase Rep
YP_007241884.1	PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family
YP_007241885.1	PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator
YP_007241886.1	PFAM: Aldehyde dehydrogenase family; TIGRFAM: methylmalonic acid semialdehyde dehydrogenase
YP_007241887.1	PFAM: Iron-containing alcohol dehydrogenase
YP_007241888.1	PFAM: Formiminotransferase-cyclodeaminase
YP_007241889.1	PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I
YP_007241890.1	PFAM: Alpha amylase, catalytic domain
YP_007241891.1	PFAM: Alpha amylase, catalytic domain; TIGRFAM: trehalose synthase
YP_007241892.1	PFAM: Domain of Unknown Function (DUF1080)
YP_007241893.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: xanthine phosphoribosyltransferase
YP_007241894.1	PFAM: Cupin domain
YP_007241896.1	PFAM: Cupin domain; Helix-turn-helix
YP_007241897.1	PFAM: Endoribonuclease L-PSP
YP_007241898.1	PFAM: FAD dependent oxidoreductase
YP_007241899.1	PFAM: MarR family; AsnC family
YP_007241900.1	PFAM: FAD dependent oxidoreductase
YP_007241903.1	PFAM: Protein of unknown function (DUF962)
YP_007241904.1	PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_007241905.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
YP_007241906.1	PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1
YP_007241908.1	PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc
YP_007241909.1	PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic
YP_007241910.1	PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut)
YP_007241911.1	PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
YP_007241912.1	PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase
YP_007241913.1	PFAM: Protein of unknown function (DUF3360)
YP_007241915.1	PFAM: Phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase
YP_007241916.1	PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth)
YP_007241917.1	PFAM: MBOAT family
YP_007241918.1	PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH
YP_007241919.1	PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: TIGR00255 family protein
YP_007241920.1	PFAM: Guanylate kinase; TIGRFAM: guanylate kinase
YP_007241921.1	PFAM: RNA polymerase Rpb6; TIGRFAM: DNA-directed RNA polymerase, omega subunit
YP_007241922.1	PFAM: HD domain; Region found in RelA / SpoT proteins; TGS domain; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family
YP_007241923.1	PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative
YP_007241924.1	PFAM: OmpA family
YP_007241925.1	PFAM: FecR protein
YP_007241926.1	PFAM: Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH
YP_007241927.1	PFAM: DJ-1/PfpI family; Bacterial regulatory helix-turn-helix proteins, AraC family
YP_007241929.1	PFAM: Domain of unknown function (DUF477)
YP_007241930.1	PFAM: Domain of unknown function (DUF477)
YP_007241931.1	PFAM: LemA family
YP_007241932.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_007241933.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: zinc-binding alcohol dehydrogenase family protein
YP_007241934.1	PFAM: CoA-transferase family III
YP_007241935.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_007241936.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_007241938.1	PFAM: Bacterial DNA-binding protein
YP_007241939.1	PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_007241940.1	PFAM: Rubredoxin
YP_007241941.1	PFAM: L-lactate permease; TIGRFAM: L-lactate transport
YP_007241942.1	PFAM: Malate synthase; TIGRFAM: malate synthase G
YP_007241943.1	PFAM: Domain of unknown function (DUF336)
YP_007241944.1	PFAM: Cysteine-rich domain
YP_007241945.1	PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain
YP_007241946.1	PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD
YP_007241947.1	PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_007241948.1	PFAM: Chorismate lyase
YP_007241949.1	PFAM: UbiA prenyltransferase family; TIGRFAM: 4-hydroxybenzoate polyprenyl transferase, proteobacterial
YP_007241950.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB
YP_007241951.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Domain of unknown function (DUF3329); PAS fold; TIGRFAM: phosphate regulon sensor kinase PhoR
YP_007241952.1	PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain
YP_007241954.1	PFAM: Peptidase family M23
YP_007241955.1	PFAM: Response regulator receiver domain
YP_007241956.1	PFAM: Universal stress protein family
YP_007241958.1	PFAM: ABC transporter
YP_007241959.1	PFAM: ABC transporter
YP_007241960.1	PFAM: Branched-chain amino acid transport system / permease component
YP_007241961.1	PFAM: Branched-chain amino acid transport system / permease component
YP_007241962.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_007241963.1	PFAM: Thymidylate synthase; TIGRFAM: thymidylate synthase
YP_007241964.1	PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase
YP_007241965.1	PFAM: Sulfite exporter TauE/SafE
YP_007241966.1	PFAM: Protein of unknown function (DUF833); manually curated
YP_007241967.1	PFAM: GAF domain; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase
YP_007241968.1	PFAM: NUDIX domain
YP_007241969.1	TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
YP_007241970.1	PFAM: Predicted integral membrane protein (DUF2269)
YP_007241971.1	PFAM: C-terminal regulatory domain of Threonine dehydratase; Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine ammonia-lyase, biosynthetic, long form
YP_007241972.1	PFAM: Ribose 5-phosphate isomerase A (phosphoriboisomerase A); TIGRFAM: ribose 5-phosphate isomerase
YP_007241973.1	PFAM: Domain of unknown function (DUF1508)
YP_007241974.1	PFAM: SdiA-regulated
YP_007241975.1	PFAM: SdiA-regulated
YP_007241976.1	PFAM: Fumarylacetoacetate (FAA) hydrolase family
YP_007241977.1	PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain
YP_007241978.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_007241981.1	PFAM: Domain of unknown function DUF20
YP_007241982.1	PFAM: OPT oligopeptide transporter protein
YP_007241983.1	PFAM: Bacterial regulatory proteins, luxR family
YP_007241984.1	PFAM: Curlin associated repeat
YP_007241988.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_007241989.1	PFAM: PhoQ Sensor; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_007241990.1	PFAM: SnoaL-like polyketide cyclase; TIGRFAM: conserved hypothetical protein, steroid delta-isomerase-related
YP_007241991.1	PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains
YP_007241992.1	PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains
YP_007241993.1	PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains
YP_007241994.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
YP_007241995.1	PFAM: Domain related to MnhB subunit of Na+/H+ antiporter
YP_007241996.1	PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit
YP_007241997.1	PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF)
YP_007241999.1	PFAM: Carbon starvation protein CstA
YP_007242001.1	PFAM: Anion-transporting ATPase; TIGRFAM: arsenite-activated ATPase ArsA
YP_007242002.1	PFAM: Protein of unknown function (DUF2628)
YP_007242003.1	PFAM: Dienelactone hydrolase family
YP_007242004.1	PFAM: Phosphoribosyl transferase domain
YP_007242005.1	PFAM: Bacterial extracellular solute-binding protein
YP_007242006.1	PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_007242008.1	PFAM: Oxidoreductase FAD-binding domain; Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain
YP_007242010.1	PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, archaeal-type
YP_007242012.1	PFAM: Family of unknown function (DUF1028)
YP_007242013.1	PFAM: Cytochrome c
YP_007242014.1	PFAM: Glucose / Sorbosone dehydrogenase
YP_007242015.1	PFAM: Protein of unknown function (DUF1456)
YP_007242016.1	PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain
YP_007242017.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_007242019.1	PFAM: alpha/beta hydrolase fold
YP_007242023.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_007242024.1	PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_007242025.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2147)
YP_007242026.1	PFAM: Response regulator receiver domain
YP_007242027.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold
YP_007242028.1	PFAM: 2-hydroxycarboxylate transporter family; TIGRFAM: citrate carrier protein, CCS family
YP_007242029.1	PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain
YP_007242030.1	PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain
YP_007242031.1	PFAM: Thiamine biosynthesis protein (ThiI); THUMP domain; TIGRFAM: thiazole biosynthesis/tRNA modification protein ThiI
YP_007242032.1	PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I
YP_007242034.1	PFAM: Penicillin-Binding Protein C-terminus Family
YP_007242035.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold
YP_007242036.1	PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: nitrogen regulation protein NR(I)
YP_007242038.1	PFAM: SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, putative, group 2
YP_007242039.1	PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit
YP_007242040.1	PFAM: Proteasome subunit; TIGRFAM: ATP-dependent protease HslVU, peptidase subunit
YP_007242041.1	PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent protease HslVU, ATPase subunit
YP_007242042.1	PFAM: Protein of unknown function (DUF971)
YP_007242043.1	PFAM: Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn); TIGRFAM: putative polyhydroxyalkanoic acid system protein
YP_007242044.1	PFAM: ubiE/COQ5 methyltransferase family; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases
YP_007242045.1	PFAM: SCP-2 sterol transfer family
YP_007242046.1	PFAM: ABC1 family; TIGRFAM: 2-polyprenylphenol 6-hydroxylase
YP_007242047.1	PFAM: Phosphoribosyl-AMP cyclohydrolase
YP_007242048.1	PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase
YP_007242049.1	PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family
YP_007242050.1	PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase TatB
YP_007242051.1	PFAM: Sec-independent protein translocase protein (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC
YP_007242052.1	PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family
YP_007242053.1	PFAM: Uncharacterised protein family (UPF0158)
YP_007242054.1	PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase
YP_007242055.1	PFAM: alpha/beta hydrolase fold; TIGRFAM: proline iminopeptidase, Neisseria-type subfamily
YP_007242057.1	PFAM: Lipocalin-like domain
YP_007242058.1	PFAM: SmpA / OmlA family
YP_007242059.1	PFAM: Bacterial protein of unknown function (DUF924)
YP_007242060.1	PFAM: Fructose-1-6-bisphosphatase
YP_007242061.1	PFAM: Carbohydrate phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases
YP_007242062.1	PFAM: Uncharacterised protein family (UPF0153)
YP_007242063.1	PFAM: Putative thioesterase (yiiD_Cterm); TIGRFAM: thioesterase domain, putative
YP_007242064.1	PFAM: Inositol monophosphatase family; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase, bacterial
YP_007242065.1	PFAM: NUDIX domain
YP_007242066.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
YP_007242067.1	PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_007242068.1	PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase family accessory protein FdhD
YP_007242070.1	PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family
YP_007242071.1	PFAM: Iron-containing alcohol dehydrogenase
YP_007242072.1	PFAM: Acyl-CoA dehydrogenase N terminal; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_007242073.1	PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
YP_007242074.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_007242075.1	PFAM: STAS domain
YP_007242077.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_007242078.1	PFAM: Stage II sporulation protein E (SpoIIE)
YP_007242079.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_007242080.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_007242081.1	PFAM: 'Cold-shock' DNA-binding domain
YP_007242083.1	PFAM: Phosphoglycerate mutase family; manually curated
YP_007242084.1	PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein
YP_007242087.1	PFAM: Aldo/keto reductase family
YP_007242088.1	PFAM: FIST C domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; FIST N domain
YP_007242089.1	PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family
YP_007242090.1	PFAM: Protein of unknown function (DUF2790)
YP_007242091.1	PFAM: Nitroreductase family
YP_007242092.1	PFAM: Phosphoenolpyruvate carboxykinase; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP)
YP_007242093.1	PFAM: Hsp33 protein
YP_007242094.1	PFAM: PAP2 superfamily
YP_007242095.1	PFAM: S4 domain
YP_007242096.1	PFAM: Protein of unknown function (DUF785)
YP_007242097.1	PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family
YP_007242098.1	PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_007242099.1	PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_007242100.1	PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region
YP_007242101.1	PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1
YP_007242102.1	PFAM: Glutamate-cysteine ligase; TIGRFAM: glutamate--cysteine ligase
YP_007242103.1	PFAM: X-Pro dipeptidyl-peptidase (S15 family)
YP_007242104.1	PFAM: Acetyltransferase (GNAT) family; Amino acid kinase family; TIGRFAM: amino-acid N-acetyltransferase
YP_007242105.1	PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: acetylornithine deacetylase (ArgE)
YP_007242106.1	PFAM: Phosphate transporter family
YP_007242107.1	PFAM: Protein of unknown function DUF47; TIGRFAM: TIGR00153 family protein
YP_007242108.1	PFAM: CYTH domain
YP_007242109.1	PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain
YP_007242111.1	PFAM: Putative peptidoglycan binding domain; L,D-transpeptidase catalytic domain
YP_007242112.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_007242113.1	PFAM: Protein of unknown function (DUF2388); TIGRFAM: conserverd hypothetical protein
YP_007242114.1	PFAM: OsmC-like protein; TIGRFAM: peroxiredoxin, OsmC subfamily
YP_007242115.1	PFAM: Bacterial extracellular solute-binding protein, family 7
YP_007242116.1	PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component
YP_007242117.1	PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit
YP_007242119.1	PFAM: Phage integrase family
YP_007242127.1	PFAM: Chromate resistance exported protein; manually curated
YP_007242128.1	PFAM: Chromate transporter; TIGRFAM: chromate transporter, chromate ion transporter (CHR) family
YP_007242129.1	PFAM: Rhodanese-like domain
YP_007242131.1	PFAM: TraX protein
YP_007242132.1	PFAM: SNARE associated Golgi protein
YP_007242133.1	PFAM: High-affinity nickel-transport protein
YP_007242134.1	PFAM: Uncharacterised BCR, COG1937
YP_007242137.1	PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
YP_007242138.1	manually curated
YP_007242139.1	PFAM: Protein of unknown function (DUF2384); TIGRFAM: putative toxin-antitoxin system antitoxin component, TIGR02293 family
YP_007242143.1	PFAM: Resolvase, N terminal domain
YP_007242144.1	PFAM: Domain of unknown function (DUF3387); Type I restriction enzyme R protein N terminus (HSDR_N); Type III restriction enzyme, res subunit; TIGRFAM: type I site-specific deoxyribonuclease, HsdR family
YP_007242145.1	PFAM: Divergent AAA domain
YP_007242147.1	PFAM: Type I restriction modification DNA specificity domain; manually curated
YP_007242148.1	PFAM: N-6 DNA Methylase; HsdM N-terminal domain
YP_007242151.1	PFAM: TOBE domain; TIGRFAM: molybdenum-pterin binding domain
YP_007242152.1	PFAM: ABC transporter
YP_007242153.1	PFAM: Binding-protein-dependent transport system inner membrane component; manually curated
YP_007242154.1	PFAM: Luciferase-like monooxygenase; TIGRFAM: alkanesulfonate monooxygenase, FMNH(2)-dependent
YP_007242155.1	PFAM: NMT1/THI5 like; TIGRFAM: ABC transporter, substrate-binding protein, aliphatic sulfonates family
YP_007242156.1	PFAM: NADPH-dependent FMN reductase; TIGRFAM: FMN reductase, SsuE family
YP_007242157.1	PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family
YP_007242158.1	PFAM: Alpha/Beta hydrolase family of unknown function (DUF1234)
YP_007242159.1	PFAM: Uncharacterized small protein (DUF2292)
YP_007242160.1	PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: sulfate/thiosulfate-binding protein
YP_007242161.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: sulfate ABC transporter, permease protein; sulfate ABC transporter, permease protein CysT
YP_007242162.1	PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: sulfate ABC transporter, permease protein CysW; sulfate ABC transporter, permease protein
YP_007242163.1	PFAM: ABC transporter; TOBE domain; TIGRFAM: sulfate ABC transporter, ATP-binding protein
YP_007242164.1	PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_007242165.1	PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4
YP_007242166.1	PFAM: Protein of unknown function (DUF3299)
YP_007242167.1	PFAM: Transglycosylase associated protein
YP_007242168.1	PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurK protein
YP_007242169.1	PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein
YP_007242170.1	PFAM: Cache domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_007242171.1	PFAM: Xylose isomerase-like TIM barrel; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase
YP_007242172.1	PFAM: Thioesterase domain; Phosphopantetheine attachment site; AMP-binding enzyme
YP_007242173.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_007242174.1	PFAM: Lyase; Fumarase C C-terminus; TIGRFAM: aspartate ammonia-lyase
YP_007242175.1	PFAM: Sodium:dicarboxylate symporter family
YP_007242177.1	PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein
YP_007242178.1	PFAM: Asparaginase
YP_007242179.1	PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_007242180.1	PFAM: Carbonic anhydrase
YP_007242181.1	PFAM: Glutaminase; TIGRFAM: glutaminase A
YP_007242183.1	PFAM: Domain of unknown function (DUF897)
YP_007242184.1	PFAM: HMGL-like; Conserved carboxylase domain; Biotin-requiring enzyme; TIGRFAM: oxaloacetate decarboxylase alpha subunit
YP_007242185.1	PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit
YP_007242186.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_007242188.1	PFAM: Helix-turn-helix domain, rpiR family; SIS domain
YP_007242189.1	PFAM: Glucose-6-phosphate dehydrogenase, C-terminal domain; Glucose-6-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glucose-6-phosphate 1-dehydrogenase
YP_007242190.1	PFAM: Acetyltransferase (GNAT) family; TIGRFAM: diaminobutyrate acetyltransferase
YP_007242191.1	PFAM: Aminotransferase class-III; TIGRFAM: 2,4-diaminobutyrate 4-transaminases; diaminobutyrate--2-oxoglutarate aminotransferase
YP_007242192.1	PFAM: Ectoine synthase
YP_007242193.1	PFAM: Phytanoyl-CoA dioxygenase (PhyH); TIGRFAM: ectoine hydroxylase
YP_007242194.1	PFAM: Amino acid kinase family; ACT domain; TIGRFAM: aspartate kinase
YP_007242195.1	PFAM: Protein of unknown function (DUF465)
YP_007242196.1	PFAM: Peptidase family U32
YP_007242197.1	PFAM: EAL domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain
YP_007242198.1	PFAM: UvrD/REP helicase; TIGRFAM: DNA helicase II
YP_007242199.1	PFAM: Bacterial extracellular solute-binding protein, family 7
YP_007242200.1	PFAM: Tim44-like domain
YP_007242201.1	PFAM: alpha/beta hydrolase fold
YP_007242202.1	PFAM: OsmC-like protein; TIGRFAM: peroxiredoxin, Ohr subfamily
YP_007242203.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family
YP_007242204.1	PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, proteobacterial-type; Contains selenocysteine; manually curated
YP_007242205.1	PFAM: Formate dehydrogenase N, transmembrane; TIGRFAM: formate dehydrogenase, beta subunit, Fe-S containing
YP_007242206.1	PFAM: Cytochrome b(N-terminal)/b6/petB; TIGRFAM: formate dehydrogenase, gamma subunit
YP_007242207.1	PFAM: Protein involved in formate dehydrogenase formation; TIGRFAM: formate dehydrogenase accessory protein FdhE
YP_007242208.1	PFAM: Selenocysteine synthase N terminal; L-seryl-tRNA selenium transferase; TIGRFAM: seryl-tRNA(sec) selenium transferase
YP_007242209.1	PFAM: Elongation factor Tu domain 2; Elongation factor SelB, winged helix; Elongation factor Tu GTP binding domain; TIGRFAM: selenocysteine-specific elongation factor SelB; small GTP-binding protein domain
YP_007242210.1	PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region
YP_007242214.1	manually curated
YP_007242218.1	PFAM: Bacteriophage coat protein B
YP_007242220.1	PFAM: Protein of unknown function (DUF2523)
YP_007242221.1	PFAM: Zonular occludens toxin (Zot)
YP_007242223.1	PFAM: Phage integrase family
YP_007242225.1	PFAM: Glycine cleavage H-protein
YP_007242226.1	PFAM: DsrE/DsrF-like family
YP_007242227.1	PFAM: Cyclopropane-fatty-acyl-phospholipid synthase
YP_007242228.1	PFAM: Universal stress protein family
YP_007242229.1	PFAM: Sulfate transporter family; STAS domain
YP_007242230.1	PFAM: Domain of unknown function (DUF3391); HD domain; TIGRFAM: uncharacterized domain HDIG
YP_007242231.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_007242232.1	PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain
YP_007242233.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_007242234.1	PFAM: YCII-related domain
YP_007242235.1	PFAM: Calcium/calmodulin dependent protein kinase II Association; TIGRFAM: conserved hypothetical protein
YP_007242236.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent siderophore receptor
YP_007242237.1	PFAM: PepSY-associated TM helix
YP_007242239.1	PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_007242240.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_007242241.1	PFAM: 3-carboxy-cis,cis-muconate lactonizing enzyme
YP_007242243.1	PFAM: Bacterial flagellin N-terminal helical region; TIGRFAM: flagellar hook-associated protein 3
YP_007242244.1	PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar hook-associated protein FlgK
YP_007242245.1	PFAM: Transglycosylase SLT domain; Rod binding protein
YP_007242246.1	PFAM: Flagellar P-ring protein
YP_007242247.1	PFAM: Flagellar L-ring protein
YP_007242248.1	PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: fagellar hook-basal body proteins; flagellar basal-body rod protein FlgG, Gram-negative bacteria
YP_007242249.1	PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body proteins
YP_007242250.1	PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); Flagellar basal body protein FlaE; TIGRFAM: fagellar hook-basal body proteins
YP_007242251.1	PFAM: Flagellar hook capping protein
YP_007242252.1	PFAM: Domain of unknown function (DUF1078); TIGRFAM: flagellar basal-body rod protein FlgC
YP_007242253.1	PFAM: Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgB
YP_007242254.1	PFAM: SAF domain; TIGRFAM: flagella basal body P-ring formation protein FlgA
YP_007242255.1	PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region
YP_007242256.1	PFAM: Transcriptional regulatory protein, C terminal
YP_007242258.1	PFAM: OmpA family
YP_007242259.1	PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: flagellar motor stator protein MotA
YP_007242260.1	PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family
YP_007242261.1	PFAM: Flagellar basal body-associated protein FliL
YP_007242262.1	PFAM: Flagellar hook-length control protein FliK; TIGRFAM: type III secretion system needle length determinant
YP_007242264.1	PFAM: Flagellar protein FliS; TIGRFAM: flagellar biosynthetic protein FliS
YP_007242265.1	PFAM: Flagellar hook-associated protein 2 C-terminus; Flagellin hook IN motif
YP_007242266.1	PFAM: FlgN protein
YP_007242267.1	PFAM: Anti-sigma-28 factor, FlgM; TIGRFAM: flagellar biosynthesis anti-sigma factor FlgM
YP_007242268.1	PFAM: Flagellar FliJ protein; TIGRFAM: flagellar export protein FliJ
YP_007242269.1	PFAM: ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family
YP_007242270.1	PFAM: Essential protein Yae1, N terminal; Flagellar assembly protein FliH
YP_007242271.1	PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG
YP_007242272.1	PFAM: Secretory protein of YscJ/FliF family; Flagellar M-ring protein C-terminal; TIGRFAM: flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF)
YP_007242273.1	PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE
YP_007242274.1	PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain
YP_007242275.1	PFAM: Surface presentation of antigens (SPOA)
YP_007242276.1	PFAM: Surface presentation of antigens (SPOA); TIGRFAM: flagellar motor switch protein FliN
YP_007242277.1	PFAM: FliP family; TIGRFAM: flagellar biosynthetic protein FliP
YP_007242279.1	PFAM: Bacterial export proteins, family 3
YP_007242280.1	PFAM: Bacterial export proteins, family 1
YP_007242281.1	PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flagellar biosynthetic protein FlhB
YP_007242282.1	PFAM: FHIPEP family; TIGRFAM: flagellar biosynthesis protein FlhA
YP_007242283.1	PFAM: PilZ domain
YP_007242286.1	PFAM: Methyltransferase small domain
YP_007242287.1	PFAM: Membrane transport protein
YP_007242289.1	PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_007242290.1	PFAM: NAD dependent epimerase/dehydratase family
YP_007242291.1	PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain
YP_007242292.1	PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG
YP_007242293.1	PFAM: YbaK / prolyl-tRNA synthetases associated domain; HDOD domain
YP_007242294.1	PFAM: General secretion pathway, M protein
YP_007242295.1	PFAM: General secretion pathway protein L (GspL); TIGRFAM: general secretion pathway protein L
YP_007242296.1	PFAM: General secretion pathway protein K
YP_007242297.1	PFAM: Pseudopilin GspJ; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; general secretion pathway protein J
YP_007242298.1	PFAM: Prokaryotic N-terminal methylation motif; Bacterial type II secretion system protein I/J; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; general secretion pathway protein I
YP_007242299.1	PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; general secretion pathway protein H
YP_007242300.1	PFAM: Prokaryotic N-terminal methylation motif; Bacterial type II secretion system protein G; TIGRFAM: general secretion pathway protein G; prepilin-type N-terminal cleavage/methylation domain
YP_007242301.1	PFAM: Bacterial type II secretion system protein F domain; TIGRFAM: general secretion pathway protein F
YP_007242302.1	PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain; TIGRFAM: general secretory pathway protein E
YP_007242303.1	PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: NAD(P) transhydrogenase, alpha subunit
YP_007242305.1	PFAM: NAD(P) transhydrogenase beta subunit
YP_007242306.1	PFAM: Flavodoxin-like fold
YP_007242307.1	PFAM: Sodium Bile acid symporter family
YP_007242308.1	PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain
YP_007242309.1	PFAM: Domain of unknown function (DUF1127)
YP_007242310.1	PFAM: Protein of unknown function (DUF2388); TIGRFAM: conserverd hypothetical protein
YP_007242311.1	PFAM: Protein of unknown function (DUF2388); TIGRFAM: conserverd hypothetical protein
YP_007242312.1	PFAM: Protein of unknown function (DUF2388); TIGRFAM: conserverd hypothetical protein
YP_007242317.1	PFAM: Phage-related baseplate assembly protein; Phage late control gene D protein (GPD); TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein
YP_007242318.1	PFAM: Protein of unknown function (DUF796); TIGRFAM: type VI secretion system effector, Hcp1 family
YP_007242319.1	PFAM: 5'-3' exonuclease, C-terminal SAM fold; 3'-5' exonuclease; 5'-3' exonuclease, N-terminal resolvase-like domain; DNA polymerase family A; TIGRFAM: DNA polymerase I
YP_007242320.1	PFAM: Protein of unknown function (DUF2782)
YP_007242321.1	PFAM: Phosphotransferase enzyme family; TIGRFAM: homoserine kinase, Neisseria type
YP_007242322.1	PFAM: Domain of unknown function (DUF3412); Possible lysine decarboxylase
YP_007242323.1	PFAM: EamA-like transporter family
YP_007242325.1	PFAM: Ribonucleotide reductase, all-alpha domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
YP_007242326.1	PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type
YP_007242327.1	PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28
YP_007242328.1	PFAM: AMP-binding enzyme
YP_007242329.1	PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator
YP_007242330.1	PFAM: Bacterial regulatory proteins, tetR family
YP_007242331.1	PFAM: Putative lysophospholipase
YP_007242332.1	PFAM: Major Facilitator Superfamily
YP_007242333.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_007242334.1	PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_007242335.1	PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
YP_007242336.1	PFAM: Response regulator receiver domain; HDOD domain
YP_007242337.1	PFAM: Aldehyde dehydrogenase family; TIGRFAM: succinate-semialdehyde dehydrogenase
YP_007242338.1	PFAM: Cytochrome C'
YP_007242339.1	PFAM: Cytochrome b(N-terminal)/b6/petB
YP_007242341.1	PFAM: FHA domain; TIGRFAM: type VI secretion system FHA domain protein
YP_007242342.1	TIGRFAM: type VI secretion lipoprotein, VC_A0113 family
YP_007242343.1	PFAM: Bacterial protein of unknown function (DUF876); TIGRFAM: type VI secretion protein, VC_A0114 family
YP_007242344.1	PFAM: Uncharacterized protein conserved in bacteria (DUF2077); TIGRFAM: type IV / VI secretion system protein, DotU family
YP_007242345.1	PFAM: Protein of unknown function (DUF1215); Intracellular multiplication and human macrophage-killing; TIGRFAM: type VI secretion protein IcmF
YP_007242346.1	PFAM: Protein phosphatase 2C
YP_007242347.1	PFAM: Protein kinase domain
YP_007242348.1	PFAM: Phage-related baseplate assembly protein; Phage late control gene D protein (GPD); TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein
YP_007242351.1	PFAM: Protein of unknown function (DUF1311)
YP_007242353.1	PFAM: Catalase
YP_007242354.1	PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein; manually curated
YP_007242355.1	PFAM: ABC transporter
YP_007242356.1	PFAM: mce related protein
YP_007242357.1	PFAM: Protein of unknown function (DUF330)
YP_007242358.1	PFAM: HlyD family secretion protein
YP_007242359.1	PFAM: ABC transporter; ABC-2 type transporter
YP_007242360.1	PFAM: ABC-2 type transporter
YP_007242361.1	PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase
YP_007242362.1	PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase, short form
YP_007242363.1	PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase
YP_007242364.1	PFAM: RmlD substrate binding domain; TIGRFAM: dTDP-4-dehydrorhamnose reductase
YP_007242365.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_007242366.1	PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain
YP_007242367.1	PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family
YP_007242368.1	PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component
YP_007242369.1	PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit
YP_007242370.1	PFAM: 2OG-Fe(II) oxygenase superfamily
YP_007242372.1	PFAM: Putative lysophospholipase
YP_007242374.1	PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent heme/hemoglobin receptor family protein
YP_007242376.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_007242377.1	PFAM: ABC transporter
YP_007242378.1	PFAM: NnrS protein
YP_007242379.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_007242380.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_007242381.1	PFAM: ABC transporter; TOBE domain; TIGRFAM: spermidine/putrescine ABC transporter ATP-binding subunit
YP_007242382.1	PFAM: Bacterial extracellular solute-binding protein
YP_007242383.1	PFAM: Bacterial extracellular solute-binding protein
YP_007242384.1	PFAM: Aminotransferase class-III
YP_007242385.1	PFAM: Glutamine synthetase, catalytic domain
YP_007242386.1	PFAM: Peptidase C26
YP_007242387.1	PFAM: Glutamine synthetase, catalytic domain
YP_007242388.1	PFAM: Bacterial regulatory proteins, tetR family
YP_007242389.1	PFAM: Carbon-nitrogen hydrolase; TIGRFAM: N-carbamoylputrescine amidase
YP_007242390.1	PFAM: Porphyromonas-type peptidyl-arginine deiminase; TIGRFAM: agmatine deiminase
YP_007242391.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_007242392.1	PFAM: GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain
YP_007242393.1	PFAM: Fatty acid desaturase
YP_007242394.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_007242395.1	PFAM: Response regulator receiver domain
YP_007242396.1	PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_007242397.1	PFAM: Response regulator receiver domain
YP_007242398.1	PFAM: GGDEF domain; Response regulator receiver domain; Hpt domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_007242399.1	PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; CHASE3 domain; PAS fold; TIGRFAM: PAS domain S-box
YP_007242400.1	PFAM: Response regulator receiver domain
YP_007242402.1	PFAM: HEAT repeat
YP_007242403.1	PFAM: Glycosyl transferase family 2
YP_007242404.1	PFAM: Aldehyde dehydrogenase family
YP_007242405.1	PFAM: Aminotransferase class-III; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate transaminase
YP_007242406.1	PFAM: Periplasmic solute binding protein family
YP_007242407.1	PFAM: Ferric uptake regulator family
YP_007242408.1	PFAM: ABC transporter
YP_007242409.1	PFAM: ABC 3 transport family
YP_007242410.1	PFAM: Protein of unknown function DUF45
YP_007242411.1	PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter
YP_007242412.1	PFAM: Catalase; DJ-1/PfpI family; Catalase-related immune-responsive
YP_007242413.1	PFAM: ABC transporter; NIL domain
YP_007242414.1	PFAM: Binding-protein-dependent transport system inner membrane component
YP_007242415.1	PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family
YP_007242416.1	PFAM: Alcohol dehydrogenase GroES-like domain; TIGRFAM: zinc-binding alcohol dehydrogenase family protein
YP_007242417.1	PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_007242419.1	PFAM: Peptidase family M3
YP_007242420.1	PFAM: Probable metal-binding protein (DUF2387); TIGRFAM: conserved hypothetical metal-binding protein
YP_007242421.1	PFAM: Domain of unknown function (DUF1835); Protein of unknown function
YP_007242422.1	PFAM: Acyltransferase family
YP_007242423.1	PFAM: Radical SAM superfamily
YP_007242425.1	PFAM: Cytochrome c; Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome C oxidase subunit II, transmembrane domain; TIGRFAM: cytochrome c oxidase, subunit II
YP_007242426.1	PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, subunit I
YP_007242427.1	PFAM: Cytochrome c oxidase assembly protein CtaG/Cox11
YP_007242428.1	PFAM: Cytochrome c oxidase subunit III
YP_007242429.1	PFAM: Protein of unknown function (DUF2909)
YP_007242430.1	PFAM: SURF1 family
YP_007242432.1	PFAM: Cytochrome oxidase assembly protein
YP_007242433.1	PFAM: UbiA prenyltransferase family; TIGRFAM: protoheme IX farnesyltransferase
YP_007242434.1	PFAM: SCO1/SenC
YP_007242435.1	PFAM: PepSY-associated TM helix
YP_007242436.1	PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent siderophore receptor
YP_007242437.1	PFAM: FecR protein
YP_007242438.1	PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family
YP_007242439.1	PFAM: Protein of unknown function (DUF3617)
YP_007242441.1	PFAM: CobW/HypB/UreG, nucleotide-binding domain
YP_007242442.1	PFAM: Protein of unknown function (DUF3301)
YP_007242444.1	PFAM: GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Phytochrome region; His Kinase A (phosphoacceptor) domain; PAS fold
YP_007242445.1	PFAM: Response regulator receiver domain
YP_007242446.1	PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box
YP_007242448.1	PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing)
YP_007242449.1	PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain
YP_007242450.1	PFAM: Nucleotidyl transferase; Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase
YP_007242451.1	PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; ATP synthase, Delta/Epsilon chain, long alpha-helix domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria)
YP_007242452.1	PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATP synthase, F1 beta subunit
YP_007242453.1	PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit
YP_007242454.1	PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit
YP_007242455.1	PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit
YP_007242456.1	PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b
YP_007242457.1	PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c
YP_007242458.1	PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)
YP_007242459.1	PFAM: ATP synthase I chain
YP_007242460.1	PFAM: ParB-like nuclease domain; KorB domain; TIGRFAM: ParB-like partition proteins
YP_007242461.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_007242462.1	PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA (guanine(527)-N(7))-methyltransferase GidB
YP_007242463.1	PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A
YP_007242464.1	PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit
YP_007242465.1	PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF)
YP_007242466.1	PFAM: Na+/H+ ion antiporter subunit
YP_007242467.1	PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N
YP_007242468.1	PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
YP_007242469.1	PFAM: Domain related to MnhB subunit of Na+/H+ antiporter
YP_007242470.1	PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains
YP_007242471.1	PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein domain
YP_007242472.1	PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain; membrane protein insertase, YidC/Oxa1 family, N-terminal domain
YP_007242473.1	PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein YidD
YP_007242474.1	PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial; manually curated; IMG reference gene:2507210241_SP
YP_007242477.1	PFAM: Domain of Unknown Function (DUF326)
YP_007242478.1	PFAM: Protein of unknown function (DUF1652); manually curated
YP_007242480.1	PFAM: Resolvase, N terminal domain; Helix-turn-helix domain of resolvase
YP_007242486.1	PFAM: Relaxase/Mobilisation nuclease domain
YP_007242488.1	PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_007242489.1	PFAM: ParG
YP_007242490.1	PFAM: Plasmid replication region DNA-binding N-term; manually curated; IMG reference gene:2507214610_SP
YP_007242492.1	PFAM: Resolvase, N terminal domain
YP_007242494.1	PFAM: Prophage CP4-57 regulatory protein (AlpA)
YP_007242495.1	PFAM: Virulence-associated protein E
YP_007242505.1	PFAM: Terminase small subunit; IMG reference gene:2507214625_SP
YP_007242508.1	PFAM: Replication protein; manually curated