-- dump date 20050316_181729 -- class Genbank::misc_feature -- table misc_feature_note -- id note 36329000001 Possible exon as peptide fragment matches one of the orphan peptides from proteomics study (source: M. Mann) maps at the 3' dowmstream region of gene PFC0430w; possibly identifies a small exon II of PFD0430w; could also be a separate very small CDS since it is part of an small open reading frame (ORF). 36329000002 putative centromere region, CEN3 36329000003 Possible exon I of PFC0890w; based on match to peptide TMCDVVLLCR from M. Mann proteomics study 36329000004 from M. Mann proteomics study TMCDVVLLCR score=27 delta=12 36329000005 perfect hit to an orphan peptide hit: SLIQNQGEIKK, evident from proteomics study by M. Mann Possible exon4 of gene PFC1065w; indicated by results from proteomics study by M. Mann 36329000006 rep20 Repeats 36329000007 Suspected frameshift area in gene PFD0110w 36329000008 GC-rich region 36329000009 GC-rich region 36329000010 GC-rich region 36329000011 Putative centromere 36329000012 Possible exon I for gene PFD0685w as obtained from proteomics data (source: M. Mann) 36329000013 Possible exon, identified in proteomics experiments lead by M. Mann; possible part of gene PFD0885w 36329000014 Possible frameshift in gene PFD0940w 36329000015 GC-rich region 36329000016 GC-rich region 36329000017 GC-rich region 36329000018 subtelomeric repeats 36329000019 Could be the last exon of gene PFA0185w 36329000020 Possible exon 36329000021 Possible exon 36329000022 Possible exon 36329000023 possible exon 36329000024 Putative centromere 36329000025 possible exon 36329000026 Possible splice donor 36329000027 GC-rich 36329000028 putative centromere 36329000029 Alternative model of Exon II of CDS feature PFE1525w, This prediction is based on proteomics data from M. Mann. Orphan peptide KILVEVQVCR hits to this exon 36329000030 Putative intron if this pseudo-RIF gene was functional 36329000031 match to PfaDd2|1437c3|1999.12.28|EST|UFla 1..413 blast score 811 percent identity 100 none 36329000032 GC-rich 36329000033 Possible splice donor 36329000034 Glutaredoxin motif 36329000035 Possible centromere 36329000036 This is a potential first exon of the published P. falciparum N-acetylglucosamine transferase coding gpi1 gene (SWALL:Q9GRI3 (EMBL:AJ249657)) 36329000037 This is the 3'-end part of the last exon of the published P. falciparum N-acetylglucosamine transferase coding gpi1 gene sequence (SWALL:Q9GRI3 (EMBL:AJ249657)); in our model of P. falciparum N-acetylglucosamine transferase coding gpi1 gene, there is a stop codon terminating the last exon and this bit is missing when compared to the published sequence; anothet point to remeber is that the published sequence was from FCBR strain of P. falciparum (Shams-Eldin et al. 2002, MBP, 120:73-81) 36329000038 Putative frameshift region in the gene MAL6P1.147 36329000039 Matches to published (SWALL:O43948 (EMBL:X94118)) Plasmodium falciparum Pk4 protein kinase gene sequence 36329000040 GC-rich region 36329000041 GC-rich region 36329000042 GC-rich 36329000043 GC-rich 36329000044 Exon II fragment of the pseudo-RIF gene 36329000045 Exon I fragment of the pseudo-RIF gene 36329000046 GC-rich 36329000047 Putative exon II fragment of pseudo-RIF gene 36329000048 Possible exon I fragment of pseudo-RIF gene 36329000049 Exon II fragment of pseudo-RIF gene 36329000050 Exon I fragment of pseudo-RIF gene 36329000051 GC-rich 36329000052 Alternative gene model boundaries of gene MAL7P1.100 36329000053 GC-rich 36329000054 GC-rich 36329000055 pseudo-RIF gene 36329000056 RIF fragment 36329000057 RIF fragment 36329000058 RIF fragment 36329000059 Alternative gene model for MAL8P1.50 gene 36329000060 Alternative gene model for MAL8P1.52 gene 36329000061 GC-rich 36329000062 GC rich 36329000063 GC-rich, looks like VAR exon 36329000064 VAR ExonI fragments 36329000065 Exon-intron boundaries of RIFIN gene, if it was functional and expressed 36329000066 Stop codon 36329000067 The gene structure in TrEMBL entry (SWALL:Q9U465 (EMBL:AF201954)) for Plasmodium falciparum phosphoribosylpyrophosphate synthetase 36329000068 GC-rich 36329000069 U6 small nuclear RNA, precise boundary not yet known