-- dump date   	20140619_223553
-- class       	Genbank::CDS
-- table       	cds_note
-- id	note
YP_004049616.1	InterPro IPR010179; KEGG: ttj:TTHB192 hypothetical protein; PFAM: CRISPR-associated protein CT1974; SPTR: Putative uncharacterized protein TTHB192; TIGRFAM: CRISPR-associated protein, Cse3 family; PFAM: CRISPR associated protein; TIGRFAM: CRISPR system CASCADE complex protein CasE/Cse3
YP_004049617.1	InterPro IPR010147: IPR013422; KEGG: ttj:TTHB191 hypothetical protein; SPTR: Putative uncharacterized protein TTHB191; TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; PFAM: CRISPR-associated protein (Cas_Cas5); TIGRFAM: CRISPR system CASCADE complex protein CasD/Cas5e; CRISPR-associated protein Cas5, N-terminal domain
YP_004049618.1	InterPro IPR010148; KEGG: ttj:TTHB190 hypothetical protein; PFAM: CRISPR-associated protein CT1975; SPTR: Putative uncharacterized protein TTHB190; TIGRFAM: CRISPR-associated protein, Cse4 family; PFAM: CT1975-like protein; TIGRFAM: CRISPR system CASCADE complex protein CasC/Cse4
YP_004049619.1	InterPro IPR013382; KEGG: sth:STH666 hypothetical protein; PFAM: CRISPR-associated protein Cse2; SPTR: Putative uncharacterized protein; TIGRFAM: CRISPR-associated protein, Cse2 family; PFAM: CRISPR-associated protein Cse2 (CRISPR_cse2); TIGRFAM: CRISPR system CASCADE complex protein CasB/Cse2
YP_004049620.1	InterPro IPR013381; KEGG: ttj:TTHB188 hypothetical protein; PFAM: CRISPR-associated protein Cse1; SPTR: Putative uncharacterized protein TTHB188; TIGRFAM: CRISPR-associated protein, Cse1 family; PFAM: CRISPR-associated protein Cse1 (CRISPR_cse1); TIGRFAM: CRISPR system CASCADE complex protein CasA/Cse1
YP_004049621.1	COGs: COG0717 Deoxycytidine deaminase; InterPro IPR011962: IPR008180; KEGG: ttj:TTHA0130 deoxycytidine triphosphate deaminase; PFAM: deoxyUTP pyrophosphatase; SPTR: Deoxycytidine triphosphate deaminase; TIGRFAM: deoxycytidine triphosphate deaminase; PFAM: dUTPase; TIGRFAM: deoxycytidine triphosphate deaminase
YP_004049622.1	COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family; InterPro IPR014001: IPR001650: IPR014021; KEGG: tgr:Tgr7_2839 DEAD-like helicase; PFAM: helicase domain protein; SMART: DEAD-like helicase; SPTR: DEAD-like helicase
YP_004049623.1	InterPro IPR002052: IPR002296; KEGG: xac:XAC2242 plasmid-related protein; SPTR: Plasmid-related protein
YP_004049624.1	KEGG: nmg:Nmag_0963 periplasmic solute binding protein; SPTR: Periplasmic solute binding protein
YP_004049625.1	KEGG: pna:Pnap_4432 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004049626.1	KEGG: pfl:PFL_4092 outer membrane ferripyoverdine receptor; SPTR: Outer membrane ferripyoverdine receptor
YP_004049627.1	KEGG: cpb:Cphamn1_2031 peptidase M16 domain protein; SPTR: Sua5/YciO/YrdC/YwlC family protein
YP_004049628.1	KEGG: geo:Geob_2307 hemerythrin-like metal-binding protein; SPTR: Hemerythrin-like metal-binding protein
YP_004049629.1	KEGG: smb:smi_0394 DNA or RNA helicases of superfamily II; SPTR: DNA or RNA helicases of superfamily II
YP_004049630.1	KEGG: hla:Hlac_3120 LtrC-like protein; SPTR: Putative uncharacterized protein
YP_004049631.1	KEGG: ami:Amir_0576 transcriptional regulator, SARP family; SPTR: Putative uncharacterized protein
YP_004049632.1	KEGG: mmi:MMAR_2173 shikimate 5-dehydrogenase; SPTR: Paraquat-inducible protein, putative
YP_004049633.1	InterPro IPR014914; KEGG: rpb:RPB_4184 hypothetical protein; PFAM: RES domain protein; SPTR: RES domain protein; PFAM: RES domain
YP_004049634.1	InterPro IPR020358; KEGG: phe:Phep_3315 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2384); TIGRFAM: putative toxin-antitoxin system antitoxin component, TIGR02293 family
YP_004049635.1	InterPro IPR013344: IPR000788: IPR013509; KEGG: mrb:Mrub_2091 ribonucleoside-diphosphate reductase adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit domain protein; PRIAM: Ribonucleoside-diphosphate reductase; SPTR: Ribonucleoside-diphosphate reductase; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: Ribonucleotide reductase, all-alpha domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; bacteriochlorophyll 4-vinyl reductase
YP_004049636.1	KEGG: cwo:Cwoe_4510 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004049637.1	COGs: COG0338 Site-specific DNA methylase; InterPro IPR002294: IPR012327; KEGG: msv:Mesil_3649 D12 class N6 adenine-specific DNA methyltransferase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; SPTR: D12 class N6 adenine-specific DNA methyltransferase; PFAM: D12 class N6 adenine-specific DNA methyltransferase
YP_004049638.1	KEGG: drt:Dret_0515 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; SPTR: Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein
YP_004049639.1	KEGG: lth:KLTH0G01716g KLTH0G01716p; SPTR: KLTH0G01716p
YP_004049640.1	KEGG: sen:SACE_6545 NADH dehydrogenase (quinone); SPTR: NADH dehydrogenase (Quinone)
YP_004049641.1	COGs: COG1351 alternative thymidylate synthase; InterPro IPR003669; KEGG: tth:TTC0731 FAD-dependent thymidylate synthase; PFAM: thymidylate synthase complementing protein ThyX; SPTR: Thymidylate synthase thyX; TIGRFAM: thymidylate synthase, flavin-dependent; PFAM: Thymidylate synthase complementing protein; TIGRFAM: thymidylate synthase, flavin-dependent
YP_004049642.1	KEGG: hha:Hhal_0668 DNA mismatch repair protein MutL; SPTR: DNA mismatch repair protein mutL
YP_004049643.1	KEGG: tva:TVAG_368230 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004049644.1	KEGG: cse:Cseg_1258 aminopeptidase N; SPTR: Short-chain dehydrogenase/reductase SDR
YP_004049645.1	KEGG: see:SNSL254_p_0116 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004049646.1	KEGG: tml:GSTUM_00010623001 hypothetical protein; SPTR: TPR repeat:TPR repeat
YP_004049647.1	KEGG: ath:AT5G55560 protein kinase family protein; SPTR: Probable serine/threonine-protein kinase WNK11
YP_004049648.1	KEGG: gme:Gmet_0259 peptidylprolyl isomerase, FKBP-type; SPTR: Peptidyl-prolyl cis-trans isomerase
YP_004049649.1	KEGG: tra:Trad_2538 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004049650.1	KEGG: mgm:Mmc1_3258 cadherin; SPTR: Cadherin
YP_004049651.1	KEGG: hut:Huta_1431 ATP synthase H subunit; SPTR: ATP synthase H subunit
YP_004049652.1	KEGG: mmq:MmarC5_0893 signal recognition particle-docking protein FtsY; SPTR: Putative uncharacterized protein
YP_004049653.1	KEGG: msv:Mesil_0554 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004049654.1	COGs: COG3864 conserved hypothetical protein; KEGG: msv:Mesil_3479 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Predicted metallopeptidase (DUF2201)
YP_004049655.1	InterPro IPR003593: IPR011704; KEGG: dhd:Dhaf_1910 ATPase associated with various cellular activities AAA_3; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; SPTR: ATPase associated with various cellular activities AAA_3; PFAM: AAA domain (dynein-related subfamily)
YP_004049656.1	COGs: COG4889 helicase; InterPro IPR002052: IPR002296: IPR007409; KEGG: sti:Sthe_0276 DNA methyltransferase; PFAM: protein of unknown function DUF450; SPTR: TaqII restriction endonuclease; PFAM: N-6 DNA Methylase
YP_004049657.1	KEGG: glo:Glov_0421 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004049658.1	KEGG: psa:PST_1744 choline transport protein BetT
YP_004049659.1	KEGG: ttj:TTHA1070 hypothetical protein; SPTR: Putative uncharacterized protein TTHA1070
YP_004049660.1	KEGG: mmi:MMAR_3703 putative transcriptional regulator; SPTR: Conserved hypothetical transcriptional regulator
YP_004049661.1	KEGG: dge:Dgeo_0834 signal transduction histidine kinase regulating citrate/malate metabolism; SPTR: Putative uncharacterized protein OSJNAb0072F04.17
YP_004049662.1	KEGG: sjp:SJA_C1-01440 3,2-trans-enoyl-CoA isomerase; SPTR: 3,2-trans-enoyl-CoA isomerase
YP_004049663.1	COGs: COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); InterPro IPR001001; KEGG: ttj:TTHA0001 DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain; PRIAM: DNA-directed DNA polymerase; SMART: DNA polymerase III beta chain; SPTR: DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit
YP_004049664.1	KEGG: tth:TT_P0208 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Phage integrase family
YP_004049665.1	KEGG: dge:Dgeo_0295 hypothetical protein; SPTR: Single-stranded DNA-binding protein DdrB
YP_004049666.1	KEGG: mch:Mchl_4056 IucA/IucC family protein; SPTR: MitE
YP_004049667.1	KEGG: dsh:Dshi_1747 acylating methylmalonate-semialdehyde dehydrogenase; SPTR: Acylating methylmalonate-semialdehyde dehydrogenase
YP_004049668.1	KEGG: ppp:PHYPADRAFT_73152 hypothetical protein; SPTR: Aldehyde oxidase and xanthine dehydrogenase family protein
YP_004049669.1	KEGG: mea:Mex_p30015 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Divergent AAA domain
YP_004049670.1	COGs: COG2865 transcriptional regulator protein; InterPro IPR007421; KEGG: gem:GM21_1016 putative transcriptional regulator; PFAM: AAA-4 family protein; SPTR: Putative transcriptional regulator; PFAM: Divergent AAA domain
YP_004049671.1	KEGG: rce:RC1_1665 HAMP domain protein; SPTR: Putative uncharacterized protein
YP_004049672.1	KEGG: tro:trd_1169 regulatory protein, MarR; SPTR: Orf2 protein
YP_004049673.1	KEGG: msv:Mesil_3547 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004049674.1	KEGG: bcj:BCAL2454 DNA topoisomerase IV subunit A; SPTR: Topoisomerase IV subunit A
YP_004049675.1	KEGG: pmr:PMI3218 DNA-binding transcriptional regulator CytR
YP_004049676.1	InterPro IPR014914; KEGG: dge:Dgeo_2974 RES domain-containing protein; PFAM: RES domain protein; SPTR: RES domain protein; PFAM: RES domain
YP_004049677.1	KEGG: smd:Smed_4538 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004049678.1	KEGG: hoh:Hoch_3313 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004049679.1	COGs: COG2383 conserved hypothetical protein; InterPro IPR007014; KEGG: tra:Trad_2930 FUN14 family protein; PFAM: FUN14 family protein; SPTR: FUN14 family protein; PFAM: FUN14 family
YP_004049680.1	COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR000212: IPR014016: IPR014017; KEGG: msv:Mesil_1403 UvrD/REP helicase; PFAM: UvrD/REP helicase; SPTR: UvrD/REP helicase; PFAM: UvrD/REP helicase
YP_004049681.1	COGs: COG3857 ATP-dependent nuclease subunit B; KEGG: mrb:Mrub_2357 ATP-dependent nuclease subunit B; SPTR: ATP-dependent nuclease subunit B
YP_004049682.1	KEGG: tro:trd_1867 hydrogenase expression/formation protein HypD; SPTR: Hydrogenase expression/formation protein HypD
YP_004049683.1	COGs: COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member; KEGG: msv:Mesil_3656 AAA ATPase; SPTR: AAA ATPase; PFAM: Viral (Superfamily 1) RNA helicase; TIGRFAM: helicase, putative, RecD/TraA family
YP_004049684.1	COGs: COG1219 ATP-dependent protease Clp ATPase subunit; InterPro IPR004487: IPR003593: IPR013093; KEGG: tth:TTC0251 ATP-dependent protease ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; SMART: AAA ATPase; SPTR: ATP-dependent Clp protease ATP-binding subunit clpX; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: AAA domain (Cdc48 subfamily); TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX)
YP_004049685.1	KEGG: cdl:CDR20291_3359 hypothetical protein; SPTR: Putative thymidine phosphorylase
YP_004049686.1	COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT; InterPro IPR001482: IPR006321; KEGG: ttj:TTHA0365 type IV pilus assembly protein, pilus retraction protein PilT; PFAM: type II secretion system protein E; SPTR: Pili retraction protein pilT; TIGRFAM: twitching motility protein; PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT
YP_004049687.1	COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR000212: IPR014016: IPR014017; KEGG: msv:Mesil_3574 UvrD/REP helicase; PFAM: UvrD/REP helicase; SPTR: UvrD/REP helicase; PFAM: UvrD/REP helicase
YP_004049688.1	InterPro IPR001119; KEGG: ttj:TTHA1893 S-layer protein precursor (P100 protein); PFAM: S-layer domain-containing protein; SPTR: S-layer protein; PFAM: S-layer homology domain
YP_004049689.1	InterPro IPR004437: IPR003115; KEGG: syp:SYNPCC7002_F0002 ParB family chromosome partitioning protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; SPTR: Stage 0 sporulation protein j; TIGRFAM: parB-like partition protein; PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins
YP_004049690.1	COGs: COG1192 ATPase involved in chromosome partitioning; KEGG: msv:Mesil_3666 cobyrinic acid ac-diamide synthase; SPTR: Cobyrinic acid ac-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_004049691.1	InterPro IPR000424; KEGG: msv:Mesil_3562 single-strand binding protein/primosomal replication protein N; PFAM: single-strand binding protein/Primosomal replication protein n; SPTR: Single-strand binding protein/Primosomal replication protein n; PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb)
YP_004049692.1	KEGG: hau:Haur_5283 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004049693.1	COGs: COG0464 ATPase of the AAA+ class; InterPro IPR003960: IPR003593: IPR003959; KEGG: tmz:Tmz1t_0342 AAA ATPase central domain protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; SPTR: AAA ATPase central domain protein; PFAM: ATPase family associated with various cellular activities (AAA)
YP_004049694.1	InterPro IPR003115; KEGG: syp:SYNPCC7002_F0002 ParB family chromosome partitioning protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; SPTR: Chromosome partitioning protein, ParB family; PFAM: ParB-like nuclease domain
YP_004049695.1	KEGG: sru:SRU_1109 ribonuclease H; SPTR: Ribonuclease H
YP_004049696.1	KEGG: pmy:Pmen_3247 pyruvate dehydrogenase (acetyl-transferring); SPTR: Pyruvate dehydrogenase (Acetyl-transferring)
YP_004049697.1	KEGG: bpm:BURPS1710b_3424 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004049698.1	KEGG: pmy:Pmen_3247 pyruvate dehydrogenase (acetyl-transferring); SPTR: Pyruvate dehydrogenase (Acetyl-transferring)
YP_004049699.1	KEGG: nca:Noca_1548 peptidoglycan-binding LysM; SPTR: Acriflavin resistance protein
YP_004049700.1	KEGG: tps:THAPS_23379 hypothetical protein; SPTR: Predicted protein
YP_004049701.1	KEGG: cte:CT1819 cytochrome d ubiquinol oxidase, subunit II
YP_004049702.1	COGs: COG0666 FOG: Ankyrin repeat; InterPro IPR002110: IPR020683; KEGG: sin:YN1551_2013 ankyrin; SPTR: Ankyrin; PFAM: Ankyrin repeat
YP_004049703.1	KEGG: msv:Mesil_0546 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated
YP_004049704.1	KEGG: aac:Aaci_2051 enoyl-CoA hydratase/isomerase; SPTR: Enoyl-CoA hydratase/isomerase
YP_004049705.1	KEGG: ret:RHE_CH02417 OmpA family membrane protein; SPTR: Chromosome segregation protein (Pcs1), putative
YP_004049706.1	COGs: COG3854 conserved hypothetical protein; InterPro IPR003593: IPR003959; KEGG: msv:Mesil_0513 AAA ATPase; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; SPTR: AAA ATPase; PFAM: ATPase family associated with various cellular activities (AAA)
YP_004049707.1	COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains); InterPro IPR008258; KEGG: msv:Mesil_3565 lytic transglycosylase catalytic; PFAM: Lytic transglycosylase catalytic; SPTR: Lytic transglycosylase catalytic; PFAM: Transglycosylase SLT domain
YP_004049708.1	KEGG: psl:Psta_4195 cytochrome c assembly protein; SPTR: Cytochrome c assembly protein
YP_004049709.1	KEGG: osa:4347464 hypothetical protein; SPTR: Os09g0497700 protein
YP_004049710.1	KEGG: sro:Sros_2529 5-oxoprolinase (ATP-hydrolyzing); SPTR: Dihydrodipicolinate reductase
YP_004049711.1	COGs: COG3505 Type IV secretory pathway VirD4 protein; InterPro IPR003688; KEGG: mrb:Mrub_0522 type IV secretory pathway VirD4 protein; PFAM: TRAG family protein; SPTR: Type IV secretory pathway VirD4 protein; PFAM: TraG/TraD family
YP_004049712.1	KEGG: mrb:Mrub_0520 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004049713.1	KEGG: kpu:KP1_1701 cell envelope integrity inner membrane protein TolA; SPTR: TolA colicin import membrane protein
YP_004049714.1	COGs: COG3451 Type IV secretory pathway VirB4 protein; KEGG: msv:Mesil_0505 type IV secretory pathway VirB4 component, ATPase TraC; SPTR: Type IV secretory pathway VirB4 component, ATPase TraC
YP_004049715.1	KEGG: ccs:CCNA_02678 hypothetical protein; SPTR: Cytochrome c oxidase subunit 1
YP_004049716.1	KEGG: tel:tlr2135 hypothetical protein; SPTR: Tlr2135 protein
YP_004049717.1	KEGG: jde:Jden_1292 DEAD/DEAH box helicase domain protein; SPTR: DEAD/DEAH box helicase domain protein
YP_004049718.1	KEGG: msv:Mesil_0500 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004049719.1	KEGG: mrb:Mrub_0515 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004049720.1	KEGG: msv:Mesil_3606 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004049721.1	KEGG: msv:Mesil_0496 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004049722.1	KEGG: dma:DMR_33810 hypothetical membrane protein; SPTR: Hypothetical membrane protein
YP_004049723.1	InterPro IPR012902; KEGG: tth:TTC0858 hypothetical protein; SPTR: PilA; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004049724.1	KEGG: ttj:TTHB120 hypothetical protein; SPTR: Putative uncharacterized protein TTHB120
YP_004049725.1	KEGG: acp:A2cp1_1438 ATP-dependent nuclease subunit B-like protein; SPTR: ATP-dependent nuclease subunit B-like protein
YP_004049726.1	KEGG: mrb:Mrub_2734 peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: Peptidase S8 and S53 subtilisin kexin sedolisin
YP_004049727.1	InterPro IPR001120: IPR012902; KEGG: msv:Mesil_3600 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004049728.1	InterPro IPR001120: IPR012902; KEGG: msv:Mesil_3598 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004049729.1	InterPro IPR012902; KEGG: msv:Mesil_3598 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004049730.1	InterPro IPR001120: IPR012902; KEGG: msv:Mesil_3594 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004049731.1	COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR001992: IPR003004: IPR018076; KEGG: mrb:Mrub_2136 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: Type II secretion system protein; PFAM: Bacterial type II secretion system protein F domain
YP_004049732.1	KEGG: nfi:NFIA_102750 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004049733.1	COGs: COG1450 Type II secretory pathway component PulD; InterPro IPR001775: IPR005644: IPR004846; KEGG: tth:TTC1017 competence protein PilQ; PFAM: type II and III secretion system protein; NolW domain protein; SPTR: Competence protein pilQ; PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein
YP_004049734.1	KEGG: ctp:CTRG_01900 hypothetical protein; SPTR: Zonadhesin variant 6
YP_004049735.1	KEGG: gsu:GSU2030 type IV pilus biogenesis protein PilO; SPTR: Type IV pilus biogenesis protein PilO
YP_004049736.1	KEGG: mtp:Mthe_1249 carbohydrate kinase, FGGY; SPTR: Xylulokinase
YP_004049737.1	COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR003593: IPR007831: IPR001482; KEGG: ttj:TTHA0364 type IV pilus assembly protein PilF; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; SPTR: ATP-binding motif-containing protein pilF; manually curated; PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain
YP_004049738.1	KEGG: afl:Aflv_1004 sporulation sigma factor SigF; SPTR: RNA polymerase sigma factor
YP_004049739.1	COGs: COG4983 conserved hypothetical protein; KEGG: cth:Cthe_1647 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; PFAM: Bifunctional DNA primase/polymerase, N-terminal
YP_004049740.1	KEGG: ypb:YPTS_3853 putative ribosome maturation factor; SPTR: Putative uncharacterized protein
YP_004049741.1	KEGG: shn:Shewana3_0919 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004049742.1	KEGG: dsi:Dsim_GD10548 GD10548 gene product from transcript GD10548-RA; SPTR: Holliday junction ATP-dependent DNA helicase ruvA
YP_004049743.1	KEGG: vap:Vapar_1856 xylose isomerase domain protein TIM barrel; SPTR: Xylose isomerase domain protein TIM barrel
YP_004049744.1	COGs: COG4712 conserved hypothetical protein; InterPro IPR007232; KEGG: msv:Mesil_2611 Rad52/22 double-strand break repair protein; PFAM: Rad52/22 double-strand break repair protein; SPTR: Rad52/22 double-strand break repair protein; PFAM: Rad52/22 family double-strand break repair protein
YP_004049745.1	KEGG: sal:Sala_2769 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004049746.1	KEGG: ami:Amir_3479 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004049747.1	COGs: COG1525 Micrococcal nuclease (thermonuclease) homologs; InterPro IPR002071: IPR006021; KEGG: ttr:Tter_2736 micrococcal nuclease; PFAM: nuclease (SNase domain-containing protein); SMART: nuclease (SNase domain-containing protein); SPTR: Micrococcal nuclease-like protein; PFAM: Staphylococcal nuclease homologue
YP_004049748.1	KEGG: lbz:LbrM11_V2.0840 hypothetical protein
YP_004049749.1	KEGG: cai:Caci_0546 aminotransferase class V; SPTR: Aminotransferase class V
YP_004049750.1	KEGG: gob:Gobs_1561 protein of unknown function DUF111; SPTR: Type II secretory pathway, component PulK
YP_004049751.1	KEGG: cin:100181439 similar to Leucine zipper transcription factor-like protein 1; SPTR: Putative uncharacterized protein
YP_004049752.1	KEGG: bpi:BPLAN_273 Holliday junction DNA helicase motor protein; SPTR: Holliday junction ATP-dependent DNA helicase ruvA
YP_004049753.1	KEGG: abo:ABO_1837 phenylalanyl-tRNA synthetase, beta subunit; SPTR: Phenylalanyl-tRNA synthetase, beta subunit
YP_004049754.1	KEGG: gvi:glr2724 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2384)
YP_004049755.1	COGs: COG2389 Uncharacterized metal-binding protein; InterPro IPR019250; KEGG: tra:Trad_0049 protein of unknown function DUF2227, metal-binding protein; PFAM: Protein of unknown function DUF2227, metal-binding; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized metal-binding protein (DUF2227)
YP_004049756.1	KEGG: msv:Mesil_0027 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004049757.1	COGs: COG4974 Site-specific recombinase XerD; InterPro IPR004107: IPR002104; KEGG: msv:Mesil_2052 integrase family protein; PFAM: integrase family protein; integrase domain protein SAM domain protein; SPTR: Integrase family protein; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family
YP_004049758.1	KEGG: bde:BDP_0579 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated
YP_004049759.1	COGs: COG1801 conserved hypothetical protein; InterPro IPR002763; KEGG: ttj:TTHA0758 hypothetical protein; PFAM: protein of unknown function DUF72; SPTR: Hypothetical conserved protein; PFAM: Protein of unknown function DUF72
YP_004056640.1	COGs: COG0593 ATPase involved in DNA replication initiation; InterProIPR013317: IPR013159: IPR020591: IPR001957: IPR 003593: IPR018312; KEGG: msv:Mesil_0001 chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase; SPTR: Chromosomal replication initiator protein DnaA; TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA
YP_004056641.1	COGs: COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); InterPro IPR001001; KEGG: msv:Mesil_0002 DNA polymerase III subunit beta; PFAM: DNA polymerase III beta chain; PRIAM: DNA-directed DNA polymerase; SMART: DNA polymerase III beta chain; SPTR: DNA polymerase III subunit beta; TIGRFAM: DNA polymerase III subunit beta; PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III subunit beta
YP_004056642.1	COGs: COG0148 Enolase; InterPro IPR020811: IPR020810: IPR000941: IPR020809; KEGG: ttj:TTHA0002 phosphopyruvate hydratase; PFAM: Enolase-like; PRIAM: Phosphopyruvate hydratase; SPTR: Enolase; TIGRFAM: enolase; PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase
YP_004056643.1	COGs: COG0469 Pyruvate kinase; InterPro IPR015793: IPR015794: IPR001697; KEGG: ttj:TTHA0003 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; PRIAM: Pyruvate kinase; SPTR: Pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase
YP_004056644.1	COGs: COG4867 Uncharacterized protein with a von Willebrand factor type A (vWA) domain; KEGG: ttj:TTHA0637 hypothetical protein; SPTR: Hypothetical cytosolic protein
YP_004056645.1	KEGG: mrb:Mrub_2433 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056646.1	KEGG: msv:Mesil_0826 transcriptional activator, TenA family; SPTR: Transcriptional activator, TenA family
YP_004056647.1	COGs: COG0384 epimerase PhzC/PhzF homolog; InterPro IPR003719; KEGG: sus:Acid_1799 PhzF family phenazine biosynthesis protein; PFAM: Phenazine biosynthesis PhzC/PhzF protein; SPTR: Phenazine biosynthesis protein PhzF family; TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis-like protein; TIGRFAM: phenazine biosynthesis protein PhzF family
YP_004056648.1	COGs: COG0245 2C-methyl-D-erythritol 2 4-cyclodiphosphate synthase; InterPro IPR003526: IPR020555; KEGG: mrb:Mrub_2267 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase; PRIAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; SPTR: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: YgbB family; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
YP_004056649.1	COGs: COG2316 hydrolase (HD superfamily); InterPro IPR006674: IPR006675; KEGG: ttj:TTHA1791 hydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SPTR: Putative hydrolase (HD domain); TIGRFAM: metal dependent phophohydrolase; PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG
YP_004056650.1	KEGG: tbd:Tbd_2650 carboxysome structural protein CsoS2; SPTR: Carboxysome structural protein CsoS2
YP_004056651.1	KEGG: pap:PSPA7_3900 cation-transporting ATPase Pma1; SPTR: Cation-transporting ATPase Pma1
YP_004056652.1	KEGG: ske:Sked_34040 protein of unknown function (DUF1469); SPTR: Putative uncharacterized protein
YP_004056653.1	COGs: COG3239 Fatty acid desaturase; InterPro IPR005804; KEGG: tth:TTC0582 omega-(3) fatty acid desaturase; PFAM: fatty acid desaturase; SPTR: Fatty acid desaturase; PFAM: Fatty acid desaturase
YP_004056654.1	COGs: COG2860 membrane protein; InterPro IPR005115; KEGG: tra:Trad_0886 protein of unknown function UPF0126; PFAM: Uncharacterised protein family UPF0126; SPTR: Putative uncharacterized protein; PFAM: UPF0126 domain
YP_004056655.1	COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002198: IPR002347; KEGG: msv:Mesil_1171 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase
YP_004056656.1	InterPro IPR013096; KEGG: rrs:RoseRS_2268 cupin 2 domain-containing protein; PFAM: Cupin 2 conserved barrel domain protein; SPTR: Cupin 2, conserved barrel domain protein; PFAM: Cupin domain
YP_004056657.1	KEGG: ttj:TTHA1700 hypothetical protein; SPTR: Hypothetical conserved protein
YP_004056658.1	COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933: IPR011650: IPR017150: IPR001261; KEGG: msv:Mesil_0895 peptidase M20; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: Peptidase M20; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain
YP_004056659.1	COGs: COG2170 conserved hypothetical protein; InterPro IPR006336: IPR011793; KEGG: tra:Trad_2629 glutamate--cysteine ligase GCS2; PFAM: glutamate--cysteine ligase GCS2; SPTR: Glutamate--cysteine ligase GCS2; PFAM: Glutamate-cysteine ligase family 2(GCS2); TIGRFAM: uncharacterized enzyme
YP_004056660.1	COGs: COG0104 Adenylosuccinate synthase; InterPro IPR001114: IPR018220; KEGG: msv:Mesil_0172 adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase; PRIAM: Adenylosuccinate synthase; SMART: adenylosuccinate synthetase; SPTR: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase
YP_004056661.1	COGs: COG1387 Histidinol phosphatase and related hydrolase of the PHP family; InterPro IPR004013: IPR010140; KEGG: msv:Mesil_1130 histidinol phosphate phosphatase HisJ family; PFAM: PHP domain protein; SPTR: Histidinol phosphate phosphatase HisJ family; TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain; TIGRFAM: histidinol phosphate phosphatase HisJ family
YP_004056662.1	COGs: COG1796 DNA polymerase IV (family X); InterPro IPR004013: IPR002054: IPR003141; KEGG: mrb:Mrub_2341 PHP domain-containing protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; DNA polymerase X; SPTR: PHP domain protein; PFAM: PHP domain
YP_004056663.1	COGs: COG0025 NhaP-type Na+/H+ and K+/H+ antiporter; InterPro IPR006153: IPR003148; KEGG: cyn:Cyan7425_0888 sodium/hydrogen exchanger; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; SPTR: Sodium/hydrogen exchanger; PFAM: TrkA-N domain; Sodium/hydrogen exchanger family
YP_004056664.1	KEGG: msv:Mesil_1412 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1049)
YP_004056665.1	COGs: COG0548 Acetylglutamate kinase; InterPro IPR001048: IPR011148: IPR004662; KEGG: mrb:Mrub_2778 acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; SPTR: Acetylglutamate/acetylaminoadipate kinase; TIGRFAM: acetylglutamate kinase; PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase
YP_004056666.1	KEGG: tth:TTC1587 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056667.1	KEGG: gob:Gobs_3808 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056668.1	KEGG: mfa:Mfla_1978 flagellar M-ring protein FliF; SPTR: Flagellar M-ring protein FliF
YP_004056669.1	InterPro IPR000620; KEGG: msv:Mesil_1151 protein of unknown function DUF6 transmembrane; PFAM: protein of unknown function DUF6 transmembrane; SPTR: Putative uncharacterized protein; PFAM: EamA-like transporter family
YP_004056670.1	COGs: COG1392 Phosphate transport regulator (distant homolog of PhoU); InterPro IPR018445; KEGG: app:CAP2UW1_3732 protein of unknown function DUF47; PFAM: Putitive phosphate transport regulator; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF47; TIGRFAM: conserved hypothetical protein TIGR00153
YP_004056671.1	COGs: COG0306 Phosphate/sulphate permease; InterPro IPR001204; KEGG: sse:Ssed_0370 phosphate transporter; PFAM: phosphate transporter; SPTR: Putative permease; PFAM: Phosphate transporter family
YP_004056672.1	COGs: COG0252 L-asparaginase/ Glu-tRNAGln amidotransferase subunit D; InterPro IPR006034; KEGG: rmr:Rmar_0656 asparaginase; PFAM: Asparaginase/glutaminase; SPTR: Putative asparaginase; PFAM: Asparaginase
YP_004056673.1	COGs: COG2217 Cation transport ATPase; InterProIPR006121: IPR008250: IPR005834: IPR001757: IPR 001366: IPR006404: IPR006416: IPR001969: IPR018303: IPR017969:I PR000150; KEGG: msv:Mesil_1627 heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; SPTR: Heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
YP_004056674.1	InterPro IPR001845: IPR018334; KEGG: ttj:TTHA0705 transcriptional repressor SmtB; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Transcriptional repressor smtB; PFAM: Bacterial regulatory protein, arsR family
YP_004056675.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: kra:Krad_2728 alpha/beta hydrolase fold; PFAM: alpha/beta hydrolase fold; SPTR: Acylhomoserine lactonase; PFAM: alpha/beta hydrolase fold
YP_004056676.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: srm:SRM_02704 response regulator DrrA; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; SPTR: Response regulator DrrA; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_004056677.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR003660: IPR003661: IPR003594: IPR004358: IPR 005467; KEGG: dac:Daci_3072 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: Histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_004056678.1	KEGG: sde:Sde_3988 DNA gyrase, B subunit; SPTR: Putative uncharacterized protein
YP_004056679.1	KEGG: scl:sce6628 secreted protein; SPTR: Putative uncharacterized protein; PFAM: Spondin_N
YP_004056680.1	KEGG: gur:Gura_0797 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056681.1	COGs: COG1957 Inosine-uridine nucleoside N-ribohydrolase; InterPro IPR001910; KEGG: xcv:XCV3507 inosine-uridine preferring nucleoside hydrolase; PFAM: Inosine/uridine-preferring nucleoside hydrolase; SPTR: Inosine-uridine preferring nucleoside hydrolase; PFAM: Inosine-uridine preferring nucleoside hydrolase
YP_004056682.1	InterPro IPR000182; KEGG: mav:MAV_5171 acetyltransferase, GNAT family protein; PFAM: GCN5-related N-acetyltransferase; SPTR: Acetyltransferase, gnat family protein; PFAM: Acetyltransferase (GNAT) family
YP_004056683.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792; KEGG: tra:Trad_2569 transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; SPTR: Transcriptional regulator, LuxR family; PFAM: Bacterial regulatory proteins, luxR family
YP_004056685.1	COGs: COG0428 divalent heavy-metal cations transporter; InterPro IPR003689; KEGG: sti:Sthe_0080 zinc/iron permease; PFAM: zinc/iron permease; SPTR: Zinc/iron permease; PFAM: ZIP Zinc transporter
YP_004056686.1	COGs: COG1914 Mn2+ and Fe2+ transporter of the NRAMP family; InterPro IPR001046; KEGG: tcx:Tcr_1141 manganese transporter NRAMP; PFAM: natural resistance-associated macrophage protein; SPTR: Metal ion (Mn2+-iron) transporter (Nramp) family transporter; TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: Natural resistance-associated macrophage protein; TIGRFAM: NRAMP (natural resistance-associated macrophage protein) metal ion transporters
YP_004056687.1	COGs: COG1321 Mn-dependent transcriptional regulator protein; InterPro IPR001367: IPR007167; KEGG: rmr:Rmar_1279 iron (metal) dependent repressor, DtxR family; PFAM: iron dependent repressor; FeoA family protein; SMART: iron dependent repressor; SPTR: Iron (Metal) dependent repressor, DtxR family; PFAM: FeoA domain; Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain
YP_004056688.1	COGs: COG0216 Protein chain release factor A; InterPro IPR005139: IPR000352: IPR004373; KEGG: ttj:TTHA1940 peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein; SPTR: Peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1
YP_004056689.1	COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR000086: IPR020476: IPR020084; KEGG: ttj:TTHA1939 MutT/NUDIX family protein; PFAM: NUDIX hydrolase; SPTR: Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase); PFAM: NUDIX domain
YP_004056690.1	COGs: COG0297 Glycogen synthase; InterPro IPR013534: IPR001296: IPR011835; KEGG: tth:TTC1980 glycogen synthase; PFAM: Starch synthase catalytic domain-containing protein; glycosyl transferase group 1; PRIAM: Starch synthase; SPTR: Glycogen synthase; TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; TIGRFAM: glycogen/starch synthases, ADP-glucose type
YP_004056691.1	InterPro IPR001440: IPR019734: IPR013026; KEGG: msv:Mesil_0811 tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide repeat
YP_004056692.1	KEGG: cyn:Cyan7425_0297 hemolysin-type calcium-binding region; SPTR: Hemolysin-type calcium-binding region
YP_004056693.1	KEGG: pmf:P9303_21011 galanin; SPTR: Possible Galanin; PFAM: Protein of unknown function (DUF3137)
YP_004056694.1	KEGG: pmf:P9303_21011 galanin; SPTR: Possible Galanin; PFAM: Protein of unknown function (DUF3137)
YP_004056695.1	COGs: COG1704 conserved hypothetical protein; InterPro IPR007156; KEGG: nam:NAMH_1335 LemA protein; PFAM: LemA family protein; SPTR: LemA family; PFAM: LemA family
YP_004056696.1	COGs: COG3333 conserved hypothetical protein; InterPro IPR002823; KEGG: msv:Mesil_0732 protein of unknown function DUF112 transmembrane; PFAM: protein of unknown function DUF112 transmembrane; SPTR: Putative uncharacterized protein; PFAM: Tripartite tricarboxylate transporter TctA family
YP_004056697.1	KEGG: mrb:Mrub_2823 tricarboxylic transport membrane protein; SPTR: Putative tricarboxylic transport membrane protein; PFAM: Tripartite tricarboxylate transporter TctB family
YP_004056698.1	COGs: COG3181 conserved hypothetical protein; InterPro IPR005064; KEGG: msv:Mesil_0734 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Tripartite tricarboxylate transporter family receptor
YP_004056699.1	COGs: COG0053 Co/Zn/Cd cation transporter; InterPro IPR002524; KEGG: msv:Mesil_2239 cation diffusion facilitator family transporter; PFAM: cation efflux protein; SPTR: Cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter
YP_004056700.1	COGs: COG0042 tRNA-dihydrouridine synthase; InterPro IPR001269; KEGG: msv:Mesil_1038 TIM-barrel protein, YjbN family; PFAM: dihydrouridine synthase DuS; SPTR: TIM-barrel protein, yjbN family; PFAM: Amidohydrolase; Dihydrouridine synthase (Dus); TIGRFAM: tRNA dihydrouridine synthase A
YP_004056701.1	COGs: COG0761 Penicillin tolerance protein; InterPro IPR003451; KEGG: msv:Mesil_1040 hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; PRIAM: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SPTR: Hydroxymethylbutenyl pyrophosphate reductase; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming)
YP_004056702.1	COGs: COG4122 O-methyltransferase; InterPro IPR002935; KEGG: sfu:Sfum_2930 O-methyltransferase family protein; PFAM: O-methyltransferase family 3; SPTR: O-methyltransferase, family 3; PFAM: O-methyltransferase
YP_004056703.1	COGs: COG0758 Rossmann fold nucleotide-binding protein involved in DNA uptake; InterPro IPR003488; KEGG: msv:Mesil_1041 DNA protecting protein DprA; PFAM: SMF family protein; SPTR: DNA protecting protein DprA; TIGRFAM: DNA protecting protein DprA; PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA
YP_004056704.1	KEGG: rha:RHA1_ro00300 MmgE/PrpD family protein; SPTR: MmgE/PrpD family protein
YP_004056705.1	COGs: COG1808 membrane protein; InterPro IPR005240: IPR013031; KEGG: ttj:TTHA1441 hypothetical protein; PFAM: protein of unknown function DUF389; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF389); TIGRFAM: conserved hypothetical protein TIGR00341; uncharacterized hydrophobic domain
YP_004056706.1	COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterPro IPR002942: IPR006145: IPR000748: IPR018496; KEGG: mrb:Mrub_0183 pseudouridine synthase; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein; SPTR: Pseudouridine synthase; PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase
YP_004056707.1	KEGG: sma:SAV_327 hypothetical protein; SPTR: Predicted protein; PFAM: Nucleoside 2-deoxyribosyltransferase
YP_004056708.1	InterPro IPR006750; KEGG: dae:Dtox_0198 protein of unknown function DUF606; PFAM: protein of unknown function DUF606; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function, DUF606
YP_004056709.1	InterPro IPR008009: IPR018247; KEGG: mrb:Mrub_2831 Ig family protein; PFAM: Ig family protein; SPTR: Ig family protein; PFAM: Dockerin type I repeat; Putative Ig domain
YP_004056710.1	KEGG: lch:Lcho_2973 membrane-bound proton-translocating pyrophosphatase; SPTR: ABC transporter
YP_004056711.1	KEGG: bfo:BRAFLDRAFT_96574 hypothetical protein; SPTR: TonB-dependent receptor
YP_004056712.1	InterPro IPR002052: IPR018130; KEGG: ttj:TTHA1848 hypothetical protein; SPTR: Putative uncharacterized protein TTHA1848
YP_004056713.1	COGs: COG0647 sugar phosphatase of the HAD superfamily; InterPro IPR005834: IPR006349: IPR006357; KEGG: sth:STH786 hypothetical protein; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: Putative uncharacterized protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; phosphoglycolate phosphatase; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily subfamily IIA hydrolase, TIGR01457; phosphoglycolate/pyridoxal phosphate phosphatase family; Haloacid Dehalogenase Superfamily Class (subfamily) IIA
YP_004056714.1	COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: bte:BTH_I3019 glycerol-3-phosphate transporter membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Glycerol-3-phosphate ABC transporter, permease protein; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004056715.1	COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: bpt:Bpet2317 sn-glycerol-3-phosphate transport system, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: sn-Glycerol-3-phosphate transport system, permease protein; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004056716.1	COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: tma:TM1120 glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein; PFAM: Bacterial extracellular solute-binding protein
YP_004056717.1	COGs: COG1349 Transcriptional regulators of sugar metabolism; InterPro IPR001034: IPR014036: IPR018356; KEGG: sth:STH793 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; SPTR: DeoR-family transcriptional regulator; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain
YP_004056718.1	KEGG: syf:Synpcc7942_0184 phosphate permease; SPTR: Inorganic phosphate transporter
YP_004056719.1	COGs: COG2361 conserved hypothetical protein; InterPro IPR008201; KEGG: tga:TGAM_2065 nucleotidyltransferase, putative; PFAM: protein of unknown function DUF86; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF86
YP_004056720.1	KEGG: ttj:TTHA1512 nucleotidyltransferase; SPTR: Putative nucleotidyltransferase
YP_004056721.1	COGs: COG0554 Glycerol kinase; InterPro IPR018484: IPR018485; KEGG: cja:CJA_1644 glycerol kinase; PFAM: Carbohydrate kinase, FGGY-like; SPTR: Putative glycerol kinase; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase
YP_004056722.1	COGs: COG0539 Ribosomal protein S1; InterPro IPR003029: IPR000110; KEGG: msv:Mesil_0117 RNA binding S1 domain protein; PFAM: RNA binding S1 domain protein; SPTR: RNA binding S1 domain protein; PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1
YP_004056723.1	COGs: COG1926 phosphoribosyltransferase; KEGG: adg:Adeg_1135 phosphoribosyltransferase; SPTR: Phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain
YP_004056724.1	KEGG: cpc:Cpar_1759 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056725.1	COGs: COG1217 membrane GTPase involved in stress response; InterProIPR000795: IPR004161: IPR000640: IPR005225: IPR 006298; KEGG: msv:Mesil_0174 GTP-binding protein TypA; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein; SPTR: GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain
YP_004056726.1	COGs: COG0270 Site-specific DNA methylase; InterPro IPR001525; KEGG: pmx:PERMA_0251 modification methylase FnuDI; PFAM: C-5 cytosine-specific DNA methylase; SPTR: Cytosine-specific methyltransferase; PFAM: C-5 cytosine-specific DNA methylase
YP_004056727.1	COGs: COG1194 A/G-specific DNA glycosylase; InterPro IPR003265: IPR003651: IPR004035; KEGG: mma:MM_0277 T/G-specific DNA glycosylase; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; SMART: HhH-GPD family protein; SPTR: T/G-specific DNA glycosylase; manually curated; PFAM: HhH-GPD superfamily base excision DNA repair protein; Iron-sulfur binding domain of endonuclease III; Helix-hairpin-helix motif
YP_004056728.1	InterPro IPR001650; KEGG: chl:Chy400_3158 helicase domain protein; PFAM: helicase domain protein; SMART: helicase domain protein; SPTR: Helicase domain protein; PFAM: Helicase conserved C-terminal domain
YP_004056729.1	InterPro IPR018973; KEGG: chl:Chy400_3157 hypothetical protein; PFAM: Protein of unknown function DUF1998; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1998)
YP_004056730.1	InterPro IPR001736; KEGG: chl:Chy400_3156 endonuclease; SPTR: Putative endonuclease; manually curated
YP_004056731.1	KEGG: ddr:Deide_3p02540 Zn-dependent hydrolases of the beta-lactamase fold protein; SPTR: Putative Zn-dependent hydrolases of the beta-lactamase fold protein
YP_004056732.1	KEGG: cpe:CPE2601 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056733.1	KEGG: msv:Mesil_0479 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056734.1	COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: msv:Mesil_0478 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004056735.1	COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: msv:Mesil_0477 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004056736.1	COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: mrb:Mrub_0791 extracellular solute-binding protein family 1; PFAM: extracellular solute-binding protein family 1; SPTR: Extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding protein
YP_004056737.1	COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307: IPR001719; KEGG: ttj:TTHA1934 hypothetical protein; PFAM: Xylose isomerase domain-containing protein TIM barrel; SMART: AP endonuclease family 2; SPTR: Putative uncharacterized protein TTHA1934; PFAM: Xylose isomerase-like TIM barrel
YP_004056738.1	COGs: COG2010 Cytochrome c mono- and diheme variants; InterPro IPR003088: IPR008168: IPR017985: IPR009056; KEGG: tth:TTC1570 cytochrome c; PFAM: cytochrome c class I; SPTR: Cytochrome c; PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III
YP_004056739.1	KEGG: tth:TTC1569 cytochrome c; SPTR: Putative cytochrome c
YP_004056740.1	COGs: COG0723 Rieske Fe-S protein; InterPro IPR017941: IPR005805; KEGG: tth:TTC1568 Rieske iron-sulfur protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: Rieske iron-sulfur protein; PFAM: Rieske [2Fe-2S] domain
YP_004056741.1	COGs: COG1290 Cytochrome b subunit of the bc complex; InterPro IPR005797: IPR005798; KEGG: tth:TTC1567 menaquinol-cytochrome c reductase cytochrome b subunit; PFAM: Cytochrome b/b6 domain; SPTR: Cytochrome b/b6 domain protein; PFAM: Cytochrome b(C-terminal)/b6/petD
YP_004056742.1	COGs: COG1164 Oligoendopeptidase F; InterPro IPR013647: IPR001567: IPR011977; KEGG: nde:NIDE3226 oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; SPTR: Peptidase M3A and M3B thimet/oligopeptidase F; TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: Oligopeptidase F; Peptidase family M3; TIGRFAM: oligoendopeptidase, pepF/M3 family
YP_004056743.1	COGs: COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog); InterPro IPR006075: IPR018027: IPR004413: IPR017958; KEGG: msv:Mesil_2785 glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB region; Asn/Gln amidotransferase; SPTR: Glutamyl-tRNA(Gln) amidotransferase, B subunit; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB/GatE catalytic domain; GatB domain; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit
YP_004056744.1	InterPro IPR004360; KEGG: bbt:BBta_6311 hypothetical protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Putative uncharacterized protein; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
YP_004056745.1	KEGG: CTP:CTRG_05789 similar to potential regulator of cytoskeleton and endocytosis Rvs167; SPTR: Putative uncharacterized protein
YP_004056747.1	KEGG: tau:Tola_1716 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056748.1	COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterProIPR003018: IPR013767: IPR000160: IPR001633: IPR 000014; KEGG: app:CAP2UW1_4053 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: EAL domain protein; GGDEF domain containing protein; GAF domain protein; PAS fold domain protein; SMART: GGDEF domain containing protein; PAS domain containing protein; GAF domain protein; EAL domain protein; SPTR: Diguanylate cyclase/phosphodiesterase with GAF sensor; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain; GAF domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain
YP_004056749.1	COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: afo:Afer_0182 diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: Diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_004056750.1	COGs: COG1524 Uncharacterized protein of the AP superfamily; InterPro IPR000917; KEGG: rca:Rcas_1244 type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: sulfatase; SPTR: Type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase
YP_004056751.1	InterPro IPR000620; KEGG: hch:HCH_03083 DMT family permease; PFAM: protein of unknown function DUF6 transmembrane; SPTR: Permease of the drug/metabolite transporter (DMT) superfamily; PFAM: EamA-like transporter family
YP_004056752.1	COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003439: IPR003593: IPR017871; KEGG: mrb:Mrub_0603 ABC transporter-like protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter; PFAM: ABC transporter
YP_004056753.1	COGs: COG1418 HD superfamily hydrolase; InterProIPR018111: IPR006674: IPR017705: IPR006675: IPR 004087: IPR003607: IPR004088; KEGG: mrb:Mrub_0744 RNA binding metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; K Homology, type 1, subgroup; SMART: metal-dependent phosphohydrolase HD region; KH domain protein; SPTR: RNA binding metal dependent phosphohydrolase; TIGRFAM: YmdA/YtgF protein; metal dependent phophohydrolase; PFAM: KH domain; HD domain; Domain of unknown function (DUF3552); TIGRFAM: conserved hypothetical protein YmdA/YtgF; uncharacterized domain HDIG
YP_004056754.1	COGs: COG0468 RecA/RadA recombinase; InterProIPR013765: IPR001553: IPR003593: IPR020584: IPR 020588: IPR020587; KEGG: ttj:TTHA1818 recombinase A; PFAM: RecA domain protein; SMART: AAA ATPase; SPTR: Protein recA; TIGRFAM: recA protein; PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA
YP_004056755.1	COGs: COG1514 2'-5' RNA ligase; InterPro IPR014051: IPR004175; KEGG: msv:Mesil_0857 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; SPTR: 2'-5' RNA ligase; TIGRFAM: 2'-5' RNA ligase; PFAM: 2',5' RNA ligase family; TIGRFAM: 2'-5' RNA ligase
YP_004056756.1	COGs: COG1058 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; InterPro IPR001453: IPR008136: IPR008135; KEGG: ttj:TTHA1820 competence/damage-inducible protein CinA; PFAM: CinA domain protein; molybdopterin binding domain; SPTR: Competence/damage-inducible protein CinA; TIGRFAM: competence/damage-inducible protein CinA; PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-terminal domain
YP_004056757.1	COGs: COG1803 Methylglyoxal synthase; InterPro IPR011607: IPR004363: IPR018148; KEGG: mrb:Mrub_2484 methylglyoxal synthase; PFAM: MGS domain protein; PRIAM: Methylglyoxal synthase; SPTR: Methylglyoxal synthase; TIGRFAM: methylglyoxal synthase; PFAM: MGS-like domain; TIGRFAM: methylglyoxal synthase
YP_004056758.1	COGs: COG1363 Cellulase M and related protein; InterPro IPR008007; KEGG: rca:Rcas_0232 peptidase M42 family protein; PFAM: peptidase M42 family protein; SPTR: Peptidase M42 family protein; PFAM: M42 glutamyl aminopeptidase
YP_004056759.1	COGs: COG1694 pyrophosphatase; InterPro IPR004518: IPR012359; KEGG: ttj:TTHA1793 hypothetical protein; PFAM: MazG nucleotide pyrophosphohydrolase; SPTR: MazG nucleotide pyrophosphohydrolase; PFAM: MazG nucleotide pyrophosphohydrolase domain
YP_004056760.1	COGs: COG1496 conserved hypothetical protein; InterPro IPR003730; KEGG: msv:Mesil_0596 protein of unknown function DUF152; PFAM: protein of unknown function DUF152; SPTR: Putative uncharacterized protein; PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: uncharacterized protein, YfiH family
YP_004056761.1	COGs: COG2179 hydrolase of the HAD superfamily; InterPro IPR005834: IPR010021: IPR006549; KEGG: mrb:Mrub_0948 HAD superfamily (subfamily IIIA) phosphatase TIGR01668; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: HAD superfamily (Subfamily IIIA) phosphatase, TIGR01668; TIGRFAM: HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
YP_004056762.1	COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR007831: IPR001482; KEGG: mrb:Mrub_0949 type II secretion system protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SPTR: Type II secretion system protein E; PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain
YP_004056763.1	COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT; InterPro IPR001482: IPR006321: IPR003593; KEGG: ttj:TTHA0365 type IV pilus assembly protein, pilus retraction protein PilT; PFAM: type II secretion system protein E; SMART: AAA ATPase; SPTR: Twitching motility protein; TIGRFAM: twitching motility protein; PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT
YP_004056764.1	COGs: COG3845 ABC-type uncharacterized transport systems ATPase components; InterPro IPR003439: IPR003593: IPR017871; KEGG: mrb:Mrub_1457 ABC transporter-like protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter; PFAM: ABC transporter
YP_004056765.1	COGs: COG4603 ABC-type uncharacterized transport system permease component; InterPro IPR001851; KEGG: msv:Mesil_1792 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component
YP_004056766.1	COGs: COG1079 ABC-type transport system permease component; InterPro IPR001851; KEGG: msv:Mesil_1793 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component
YP_004056767.1	COGs: COG1744 Uncharacterized ABC-type transport system periplasmic component/surface lipoprotein; InterPro IPR003760; KEGG: ttj:TTHA1301 hypothetical protein; PFAM: basic membrane lipoprotein; SPTR: Putative uncharacterized protein TTHA1301; PFAM: Basic membrane protein
YP_004056768.1	COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR017867; KEGG: tra:Trad_2156 protein-tyrosine phosphatase, low molecular weight; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: Protein-tyrosine phosphatase, low molecular weight; PFAM: Low molecular weight phosphotyrosine protein phosphatase
YP_004056769.1	KEGG: tcu:Tcur_3468 DNA primase catalytic core domain protein; SPTR: Putative uncharacterized protein
YP_004056770.1	InterPro IPR013026; KEGG: msv:Mesil_1076 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056771.1	KEGG: msv:Mesil_1075 TPR repeat-containing protein; SPTR: TPR repeat-containing protein
YP_004056772.1	COGs: COG1912 conserved hypothetical protein; InterPro IPR002747; KEGG: tth:TTC1645 hypothetical protein; PFAM: protein of unknown function DUF62; SPTR: Hypothetical conserved protein; PFAM: S-adenosyl-l-methionine hydroxide adenosyltransferase
YP_004056773.1	COGs: COG0496 acid phosphatase; InterPro IPR002828; KEGG: tth:TTC1625 stationary phase survival protein SurE; PFAM: Survival protein SurE; SPTR: Stationary-phase survival protein SurE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE
YP_004056774.1	COGs: COG0705 membrane protein; InterPro IPR002610; KEGG: ttj:TTHA1474 hypothetical protein; PFAM: Rhomboid family protein; SPTR: Hypothetical membrane spanning protein; PFAM: Rhomboid family
YP_004056775.1	COGs: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; InterPro IPR006674; KEGG: tra:Trad_1982 diguanylate cyclase and metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SPTR: Diguanylate cyclase and metal dependent phosphohydrolase; PFAM: HD domain
YP_004056776.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789; KEGG: sro:Sros_8879 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator receiver protein; PFAM: Response regulator receiver domain
YP_004056777.1	COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterPro IPR003661: IPR003594: IPR004358: IPR005467; KEGG: sth:STH732 two-component sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: Two-component sensor histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_004056778.1	COGs: COG3915 conserved hypothetical protein; InterPro IPR000572; KEGG: hau:Haur_3123 hypothetical protein; PFAM: oxidoreductase molybdopterin binding; SPTR: Putative uncharacterized protein; PFAM: Oxidoreductase molybdopterin binding domain
YP_004056779.1	KEGG: tth:TTC1599 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056780.1	COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: ttj:TTHA0791 hypothetical protein; PFAM: LmbE family protein; SPTR: Hypothetical membrane associated protein; PFAM: GlcNAc-PI de-N-acetylase
YP_004056781.1	InterPro IPR000182; KEGG: ttj:TTHA0790 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Putative acetyltransferase; PFAM: Acetyltransferase (GNAT) family
YP_004056782.1	InterPro IPR018967: IPR006622; KEGG: msv:Mesil_0622 iron sulfur domain-containing, CDGSH-type; PFAM: Iron sulphur-containing domain, CDGSH-type; SPTR: Iron sulfur domain-containing, CDGSH-type; PFAM: Iron-binding zinc finger CDGSH type
YP_004056783.1	COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; KEGG: rxy:Rxyl_0385 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Prolyl oligopeptidase family
YP_004056784.1	COGs: COG0166 Glucose-6-phosphate isomerase; InterPro IPR001672: IPR018189; KEGG: mrb:Mrub_2801 phosphoglucose isomerase (PGI); PFAM: phosphoglucose isomerase (PGI); SPTR: Glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase
YP_004056785.1	KEGG: msv:Mesil_0796 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056786.1	KEGG: msv:Mesil_0795 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056787.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871: IPR018525; KEGG: msv:Mesil_0794 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter; PFAM: ABC transporter
YP_004056788.1	COGs: COG1725 transcriptional regulator protein; InterPro IPR000524; KEGG: msv:Mesil_0793 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: Transcriptional regulator, GntR family; PFAM: Bacterial regulatory proteins, gntR family
YP_004056789.1	COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; KEGG: tra:Trad_0952 peptidase S9 prolyl oligopeptidase active site domain protein; SPTR: Dienelactone hydrolase family; PFAM: Prolyl oligopeptidase family
YP_004056790.1	COGs: COG0501 Zn-dependent protease with chaperone function; InterPro IPR001915; KEGG: sti:Sthe_1957 STE24 endopeptidase; PFAM: peptidase M48 Ste24p; SPTR: Ste24 endopeptidase; PFAM: Peptidase family M48
YP_004056791.1	COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: mac:MA3662 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: Putative uncharacterized protein; PFAM: Methyltransferase domain
YP_004056792.1	KEGG: rrs:RoseRS_2630 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Cellulase (glycosyl hydrolase family 5)
YP_004056793.1	KEGG: mbu:Mbur_0397 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056794.1	COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase; InterPro IPR000120: IPR020556; KEGG: hch:HCH_05736 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases; PFAM: Amidase; SPTR: Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases; PFAM: Amidase
YP_004056795.1	InterPro IPR004518: IPR011379; KEGG: msv:Mesil_0390 MazG nucleotide pyrophosphohydrolase; PFAM: MazG nucleotide pyrophosphohydrolase; SPTR: MazG nucleotide pyrophosphohydrolase; PFAM: MazG nucleotide pyrophosphohydrolase domain
YP_004056796.1	InterPro IPR000551; KEGG: kse:Ksed_08290 hypothetical protein; PFAM: regulatory protein MerR; SPTR: Putative uncharacterized protein
YP_004056797.1	InterPro IPR011701; KEGG: kra:Krad_0799 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1
YP_004056798.1	COGs: COG0220 S-adenosylmethionine-dependent methyltransferase; InterPro IPR003358; KEGG: msv:Mesil_3168 tRNA (guanine-N(7)-)-methyltransferase; PFAM: methyltransferase; SPTR: tRNA (Guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: Putative methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase
YP_004056799.1	COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterProIPR013655: IPR003018: IPR013656: IPR000160: IPR 001633: IPR000014: IPR001610: IPR000700; KEGG: ava:Ava_2710 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-3 domain protein; GAF domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; GAF domain protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain; GAF domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain
YP_004056800.1	InterPro IPR003088: IPR009056; KEGG: msv:Mesil_1565 cytochrome c class I; PFAM: cytochrome c class I; SPTR: Periplasmic citochrome c; PFAM: Cytochrome c
YP_004056801.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: msv:Mesil_0738 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; SPTR: Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_004056802.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR003661: IPR003594: IPR001440: IPR004358: IPR 019734: IPR005467: IPR013026; KEGG: rca:Rcas_3032 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Tetratricopeptide TPR_1 repeat-containing protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Tetratricopeptide repeat; SPTR: Histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_004056803.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: tth:TTC1978 two-component response regulator; PFAM: transcriptional regulator domain-containing protein; response regulator receiver; SMART: response regulator receiver; SPTR: Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_004056804.1	KEGG: ttj:TTHA0994 hypothetical protein; SPTR: Putative uncharacterized protein TTHA0994
YP_004056805.1	COGs: COG2229 GTPase; InterPro IPR004130; KEGG: dra:DR_2181 hypothetical protein; PFAM: protein of unknown function ATP binding; SPTR: Putative uncharacterized protein; PFAM: Conserved hypothetical ATP binding protein; TIGRFAM: small GTP-binding protein domain
YP_004056806.1	COGs: COG2018 Uncharacterized distant relative of homeotic protein bithoraxoid; InterPro IPR004942; KEGG: dra:DR_1612 hypothetical protein; PFAM: Roadblock/LC7 family protein; SPTR: Putative uncharacterized protein; PFAM: Roadblock/LC7 domain
YP_004056807.1	KEGG: min:Minf_0772 globin domain; SPTR: Globin domain protein
YP_004056808.1	KEGG: ttj:TTHA1012 hypothetical protein; SPTR: Hypothetical conserved protein
YP_004056809.1	KEGG: msv:Mesil_3068 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056810.1	COGs: COG0842 ABC-type multidrug transport system permease component; InterPro IPR013525: IPR013526: IPR000412; KEGG: msv:Mesil_3069 ABC transporter; PFAM: ABC transporter; SPTR: ABC transporter; PFAM: ABC transporter
YP_004056811.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: mrb:Mrub_0256 heme exporter protein CcmA; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Heme exporter protein CcmA; PFAM: ABC transporter
YP_004056812.1	InterPro IPR001647; KEGG: mrb:Mrub_0257 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_004056813.1	COGs: COG1950 membrane protein; InterPro IPR007165; KEGG: msv:Mesil_0099 hypothetical protein; PFAM: hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Membrane protein of unknown function
YP_004056814.1	KEGG: ttj:TTHB040 hypothetical protein; SPTR: Hypothetical conserved protein
YP_004056815.1	KEGG: msv:Mesil_0260 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056816.1	KEGG: tne:Tneu_1338 MoaD family protein; SPTR: MoaD family protein
YP_004056817.1	KEGG: msv:Mesil_0261 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056818.1	InterPro IPR006016: IPR006015; KEGG: msv:Mesil_0101 UspA domain protein; PFAM: UspA domain-containing protein; SPTR: UspA domain protein; PFAM: Universal stress protein family
YP_004056819.1	InterPro IPR000297; KEGG: msv:Mesil_0103 PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SPTR: PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: PPIC-type PPIASE domain
YP_004056820.1	KEGG: msv:Mesil_0104 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056821.1	COGs: COG1239 Mg-chelatase subunit ChlI; KEGG: tth:TTC0268 magnesium-chelatase subunit ChlI; SPTR: Magnesium-chelatase subunit chlI; PFAM: Sigma-54 interaction domain
YP_004056822.1	COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006127: IPR006129: IPR006128; KEGG: tra:Trad_0857 periplasmic solute binding protein; PFAM: periplasmic solute binding protein; SPTR: Periplasmic solute binding protein; PFAM: Periplasmic solute binding protein family
YP_004056823.1	COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013341: IPR013342: IPR018110; KEGG: hau:Haur_3591 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing protein; SPTR: Mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
YP_004056824.1	COGs: COG1556 conserved hypothetical protein; InterPro IPR003741; KEGG: msv:Mesil_1094 protein of unknown function DUF162; PFAM: protein of unknown function DUF162; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised ACR, YkgG family COG1556
YP_004056825.1	COGs: COG1139 conserved hypothetical protein containing a ferredoxin-like domain; InterPro IPR003741: IPR017900: IPR017896; KEGG: msv:Mesil_1095 iron-sulfur cluster binding protein; PFAM: protein of unknown function DUF162; SPTR: Iron-sulfur cluster binding protein; PFAM: Domain of unknown function (DUF3390); Uncharacterised ACR, YkgG family COG1556; TIGRFAM: iron-sulfur cluster-binding protein
YP_004056826.1	COGs: COG0247 Fe-S oxidoreductase; InterPro IPR004017; KEGG: msv:Mesil_1096 protein of unknown function DUF224 cysteine-rich region domain protein; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: Putative uncharacterized protein; PFAM: Cysteine-rich domain
YP_004056827.1	COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR006153: IPR003148: IPR006037; KEGG: dol:Dole_3180 TrkA domain-containing protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; TrkA-C domain protein; SPTR: TrkA-C domain protein; PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; TrkA-C domain
YP_004056828.1	COGs: COG1092 SAM-dependent methyltransferase; KEGG: tra:Trad_1869 rRNA (guanine-N(2)-)-methyltransferase; PRIAM: rRNA (guanine-N(2)-)-methyltransferase; SPTR: rRNA (Guanine-N(2)-)-methyltransferase; PFAM: S-adenosylmethionine-dependent methyltransferase
YP_004056829.1	COGs: COG0421 Spermidine synthase; InterPro IPR001045; KEGG: ttj:TTHA0824 spermidine synthase; PFAM: Spermine synthase; SPTR: Spermidine synthase; PFAM: Spermine/spermidine synthase; TIGRFAM: spermidine synthase
YP_004056830.1	COGs: COG1586 S-adenosylmethionine decarboxylase; InterPro IPR003826: IPR009165; KEGG: lbf:LBF_2216 S-adenosylmethionine decarboxylase; PFAM: S-adenosylmethionine decarboxylase related; SPTR: S-adenosylmethionine decarboxylase, proenzyme; TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; PFAM: S-adenosylmethionine decarboxylase; TIGRFAM: S-adenosylmethionine decarboxylase proenzyme, Escherichia coli form
YP_004056831.1	InterPro IPR006626; KEGG: scl:sce0797 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056832.1	COGs: COG0360 Ribosomal protein S6; InterPro IPR020814: IPR000529; KEGG: mrb:Mrub_1778 30S ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like; SPTR: 30S ribosomal protein S6; TIGRFAM: ribosomal protein S6; PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6
YP_004056833.1	COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR000424: IPR011344; KEGG: msv:Mesil_0828 single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; SPTR: Single-strand binding protein; TIGRFAM: single-strand binding protein; PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb)
YP_004056834.1	COGs: COG0238 Ribosomal protein S18; InterPro IPR001648; KEGG: tra:Trad_0006 ribosomal protein S18; PFAM: ribosomal protein S18; SPTR: Ribosomal protein S18; TIGRFAM: ribosomal protein S18; PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18
YP_004056835.1	COGs: COG0359 Ribosomal protein L9; InterPro IPR020070: IPR020069: IPR020594; KEGG: msv:Mesil_0830 ribosomal protein L9; PFAM: Ribosomal protein L9-like; SPTR: Ribosomal protein L9; TIGRFAM: ribosomal protein L9; PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9
YP_004056836.1	COGs: COG3291 FOG: PKD repeat; InterPro IPR000601; KEGG: dge:Dgeo_1665 Ig-like protein, group 2; PFAM: PKD domain containing protein; SMART: PKD domain containing protein; SPTR: Metalloendopeptidase M8 containing Ig-like domains; PFAM: Leishmanolysin; PKD domain
YP_004056837.1	COGs: COG0305 Replicative DNA helicase; InterPro IPR007693: IPR007694: IPR007692: IPR003593; KEGG: msv:Mesil_3095 replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase; SPTR: Replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase
YP_004056838.1	COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; KEGG: dol:Dole_1108 hypothetical protein; SPTR: Metal-dependent hydrolase; PFAM: Metallo-beta-lactamase superfamily
YP_004056839.1	KEGG: ttj:TTHA0994 hypothetical protein; SPTR: Putative uncharacterized protein TTHA0994
YP_004056840.1	COGs: COG0606 ATPase with chaperone activity; InterProIPR000523: IPR001208: IPR004482: IPR003593: IPR 000408; KEGG: ttj:TTHA0201 Mg(2+) chelatase family protein; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase; SPTR: Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein
YP_004056841.1	KEGG: rop:ROP_51550 drug resistance efflux protein; SPTR: Drug resistance efflux protein
YP_004056842.1	KEGG: sen:SACE_1317 alpha-L-fucosidase; SPTR: Peptidoglycan binding domain protein, putative
YP_004056843.1	COGs: COG2414 Aldehyde:ferredoxin oxidoreductase; InterPro IPR013983: IPR001203; KEGG: tth:TT_P0122 tungsten-containing aldehyde ferredoxin oxidoreductase; PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; PRIAM: Aldehyde ferredoxin oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase; SPTR: Probable tungsten-containing aldehyde ferredoxin oxidoreductase; PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3
YP_004056844.1	COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: hmo:HM1_0881 transcriptional regulator, TetR family, putative; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family protein; PFAM: Bacterial regulatory proteins, tetR family
YP_004056845.1	COGs: COG1033 exporter of the RND superfamily protein; InterPro IPR000731; KEGG: hor:Hore_08450 efflux transporter, putative, hydrophobe/amphiphile efflux-3 (HAE3) family; SPTR: Efflux transporter, putative, hydrophobe/amphiphile efflux-3 (HAE3) family; PFAM: MMPL family; TIGRFAM: The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family
YP_004056846.1	KEGG: fsu:Fisuc_1740 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1329)
YP_004056847.1	KEGG: dba:Dbac_2226 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056848.1	COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006963: IPR006656: IPR006657; KEGG: msv:Mesil_0031 molybdopterin dinucleotide-binding region; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; SPTR: Molybdopterin dinucleotide-binding region; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain
YP_004056849.1	COGs: COG2340 Uncharacterized protein with SCP/PR1 domains; InterPro IPR014044; KEGG: ttj:TTHA0105 hypothetical protein; PFAM: SCP-like extracellular; SPTR: Allergen V5/Tpx-1 family protein; PFAM: Cysteine-rich secretory protein family
YP_004056850.1	COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198: IPR002347; KEGG: gvi:glr0293 carbonyl reductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Glr0293 protein; PFAM: short chain dehydrogenase
YP_004056851.1	KEGG: hma:rrnAC0753 shikimate kinase; SPTR: Putative uncharacterized protein
YP_004056852.1	KEGG: mlu:Mlut_03230 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056853.1	KEGG: bpm:BURPS1710b_3602 hypothetical protein; SPTR: Peptide chain release factor 2; manually curated; PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2
YP_004056854.1	InterPro IPR011701; KEGG: gob:Gobs_4887 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily
YP_004056855.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: rxy:Rxyl_0754 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter
YP_004056856.1	KEGG: hvo:HVO_A0322 ABC-type ABC transporter permease; SPTR: ABC-type ABC transporter permease
YP_004056857.1	KEGG: mem:Memar_0327 daunorubicin resistance ABC transporter, inner membrane subunit B; SPTR: Daunorubicin resistance ABC transporter, inner membrane subunit B
YP_004056858.1	COGs: COG0431 flavoprotein; InterPro IPR005025; KEGG: bbe:BBR47_23050 flavin reductase; PFAM: NADPH-dependent FMN reductase; SPTR: Flavin reductase; PFAM: NADPH-dependent FMN reductase
YP_004056859.1	KEGG: msv:Mesil_0333 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056860.1	COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389: IPR004682; KEGG: chy:CHY_1366 TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7; SPTR: TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family
YP_004056861.1	COGs: COG3090 TRAP-type C4-dicarboxylate transport system small permease component; InterPro IPR007387; KEGG: chy:CHY_1365 TRAP dicarboxylate transporter, DctQ subunit; PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; SPTR: TRAP dicarboxylate transporter, DctQ subunit; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component
YP_004056862.1	COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR010656: IPR004681; KEGG: dhd:Dhaf_1069 TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: Putative uncharacterized protein; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit
YP_004056863.1	COGs: COG0003 ATPase involved in chromosome partitioning; KEGG: hbu:Hbut_0265 oxyanion-translocating ATPase, ArsA; SPTR: Oxyanion-translocating ATPase, ArsA; PFAM: Anion-transporting ATPase; TIGRFAM: arsenite-activated ATPase (arsA)
YP_004056864.1	KEGG: ttj:TTHA0227 hypothetical protein; SPTR: Putative uncharacterized protein TTHA0227
YP_004056865.1	InterPro IPR002781; KEGG: pfs:PFLU5046 hypothetical protein; PFAM: protein of unknown function DUF81; SPTR: Putative membrane protein; PFAM: Sulfite exporter TauE/SafE
YP_004056866.1	COGs: COG0406 Fructose-2 6-bisphosphatase; InterPro IPR013078; KEGG: ttj:TTHA0368 phosphoglycerate mutase; PFAM: Phosphoglycerate mutase; SPTR: Phosphoglycerate mutase; PFAM: Phosphoglycerate mutase family
YP_004056867.1	COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase; InterPro IPR000120: IPR020556; KEGG: tra:Trad_1165 amidase; PFAM: Amidase; SPTR: Amidase; PFAM: Amidase
YP_004056868.1	COGs: COG2008 Threonine aldolase; InterPro IPR001597; KEGG: mrb:Mrub_3043 threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; PRIAM: Threonine aldolase; SPTR: Threonine aldolase; PFAM: Beta-eliminating lyase
YP_004056869.1	COGs: COG0521 Molybdopterin biosynthesis protein; InterPro IPR001453: IPR020817: IPR008284; KEGG: ttj:TTHA0341 molybdopterin biosynthesis enzyme, MoaB; PFAM: molybdopterin binding domain; SPTR: Molybdopterin biosynthesis enzyme, MoaB; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain
YP_004056870.1	COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: msv:Mesil_3182 aminotransferase class I and II; PFAM: aminotransferase class I and II; SPTR: Aminotransferase class I and II; PFAM: Aminotransferase class I and II
YP_004056871.1	COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR013099: IPR003148: IPR006037; KEGG: aae:aq_303 hypothetical protein; PFAM: TrkA-N domain protein; Ion transport 2 domain protein; TrkA-C domain protein; SPTR: Putative uncharacterized protein; PFAM: TrkA-N domain; Ion channel; TrkA-C domain
YP_004056872.1	KEGG: aae:aq_302 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056873.1	COGs: COG2896 Molybdenum cofactor biosynthesis protein; InterPro IPR007197: IPR010505: IPR013483: IPR006638; KEGG: ttj:TTHA0011 molybdenum cofactor biosynthesis protein A (MoaA); PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial
YP_004056874.1	COGs: COG1159 GTPase; InterProIPR002917: IPR004044: IPR006073: IPR005225: IPR 005662; KEGG: ttj:TTHA0120 GTP-binding protein Era; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; SPTR: GTP-binding protein era homolog; TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTPase of unknown function; KH domain; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain
YP_004056875.1	KEGG: rsl:RPSI07_0259 hypothetical protein; SPTR: Putative curculin-like (Mannose-binding) lectin protein
YP_004056876.1	KEGG: azc:AZC_1915 hypothetical protein; SPTR: Glycoprotein
YP_004056877.1	KEGG: ttj:TTHA0775 hypothetical protein; SPTR: Putative uncharacterized protein TTHA0775
YP_004056878.1	KEGG: bgl:bglu_1g23670 serine O-acetyltransferase; SPTR: Serine O-acetyltransferase
YP_004056879.1	KEGG: ttj:TTHA0777 hypothetical protein; SPTR: Putative uncharacterized protein TTHA0777
YP_004056880.1	COGs: COG2720 Uncharacterized vancomycin resistance protein; InterPro IPR007391: IPR013838; KEGG: ttj:TTHA0072 hypothetical protein; PFAM: VanW family protein; SPTR: Vancomycin B-type resistance protein vanW; PFAM: VanW like protein
YP_004056881.1	COGs: COG3635 phosphoglycerate mutase AP superfamily; InterPro IPR019304: IPR006124: IPR004456; KEGG: msv:Mesil_0081 phosphoglycerate mutase; PFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; metalloenzyme domain protein; PRIAM: Phosphoglycerate mutase; SPTR: Phosphoglycerate mutase; PFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Metalloenzyme superfamily; TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form
YP_004056882.1	InterPro IPR003251; KEGG: msv:Mesil_0411 hypothetical protein; PFAM: Rubrerythrin; SPTR: Putative uncharacterized protein; PFAM: Ferritin-like domain
YP_004056883.1	KEGG: msv:Mesil_0402 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056884.1	COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068: IPR010916; KEGG: ttj:TTHA1484 hsp 20 family small heat shock protein; PFAM: heat shock protein Hsp20; SPTR: Small heat shock protein; PFAM: Hsp20/alpha crystallin family
YP_004056885.1	InterPro IPR015207; KEGG: ttj:TTHA1479 hypothetical protein; PFAM: Domain of unknown function DUF1931; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1931)
YP_004056886.1	COGs: COG1937 conserved hypothetical protein; InterPro IPR003735; KEGG: ttj:TTHA1953 hypothetical protein; PFAM: protein of unknown function DUF156; SPTR: Hypothetical cytosolic protein; PFAM: Uncharacterised BCR, COG1937
YP_004056887.1	COGs: COG1801 conserved hypothetical protein; InterPro IPR002763; KEGG: tra:Trad_0829 protein of unknown function DUF72; PFAM: protein of unknown function DUF72; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF72
YP_004056888.1	COGs: COG0546 phosphatase; InterPro IPR005834: IPR006402: IPR006439; KEGG: mxa:MXAN_6112 HAD family hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
YP_004056889.1	COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; InterPro IPR002130; KEGG: msv:Mesil_0746 peptidyl-prolyl cis-trans isomerase cyclophilin type; PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; SPTR: Peptidyl-prolyl cis-trans isomerase cyclophilin type; PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
YP_004056890.1	InterPro IPR004843: IPR000421; KEGG: tro:trd_0140 purple acid phosphatase-like protein; PFAM: metallophosphoesterase; PRIAM: Alkaline phosphatase; SPTR: Putative purple acid phosphatase-like protein; PFAM: Calcineurin-like phosphoesterase
YP_004056891.1	COGs: COG0717 Deoxycytidine deaminase; InterPro IPR011962; KEGG: ttj:TTHA0130 deoxycytidine triphosphate deaminase; SPTR: Deoxycytidine triphosphate deaminase; TIGRFAM: deoxycytidine triphosphate deaminase; PFAM: dUTPase; TIGRFAM: deoxycytidine triphosphate deaminase
YP_004056892.1	KEGG: msv:Mesil_3039 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056893.1	COGs: COG1543 conserved hypothetical protein; InterPro IPR004300: IPR015293; KEGG: ttj:TTHA1902 hypothetical protein; PFAM: glycoside hydrolase family 57; Domain of unknown function DUF1957; SPTR: Putative uncharacterized protein TTHA1902; PFAM: Domain of unknown function (DUF1957); Glycosyl hydrolase family 57
YP_004056894.1	InterPro IPR019248; KEGG: msv:Mesil_0327 protein of unknown function DUF2223; PFAM: Protein of unknown function DUF2223; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF2223)
YP_004056895.1	COGs: COG0391 conserved hypothetical protein; InterPro IPR002882: IPR010119; KEGG: msv:Mesil_0328 protein of unknown function UPF0052 and CofD; PFAM: protein of unknown function UPF0052 and CofD; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family UPF0052; TIGRFAM: conserved hypothetical protein, cofD-related
YP_004056896.1	COGs: COG1660 P-loop-containing kinase; InterPro IPR005337; KEGG: ttj:TTHA0319 hypothetical protein; SPTR: UPF0042 nucleotide-binding protein TTHA0319; PFAM: P-loop ATPase protein family
YP_004056897.1	InterPro IPR000182; KEGG: rxy:Rxyl_0611 acetyltransferase; SPTR: Acetyltransferase, GNAT family
YP_004056898.1	KEGG: xau:Xaut_0664 redoxin domain-containing protein; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
YP_004056899.1	KEGG: tal:Thal_1454 protein of unknown function DUF2495; SPTR: Putative uncharacterized protein; PFAM: Phosphate-starvation-inducible E
YP_004056900.1	KEGG: rmr:Rmar_1302 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056901.1	COGs: COG1542 conserved hypothetical protein; InterPro IPR007548; KEGG: ttr:Tter_1487 protein of unknown function DUF505; PFAM: protein of unknown function DUF505; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF505)
YP_004056902.1	KEGG: ttj:TTHA0141 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056903.1	KEGG: aae:aq_755 hypothetical protein; SPTR: Uncharacterized protein aq_755
YP_004056904.1	COGs: COG0705 membrane protein; InterPro IPR002610; KEGG: tra:Trad_0343 rhomboid family protein; PFAM: Rhomboid family protein; SPTR: Rhomboid family protein; PFAM: Rhomboid family
YP_004056905.1	COGs: COG0616 Periplasmic serine protease (ClpP class); KEGG: ttj:TTHA1475 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Serine dehydrogenase proteinase
YP_004056906.1	KEGG: amd:AMED_7374 hypothetical protein; SPTR: Major Facilitator Superfamily protein
YP_004056907.1	KEGG: reu:Reut_B3810 major facilitator transporter; SPTR: Putative uncharacterized protein
YP_004056908.1	KEGG: xfn:XfasM23_0212 phosphoesterase PA-phosphatase related; SPTR: Putative uncharacterized protein
YP_004056909.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: ton:TON_1391 hypothetical protein; PFAM: major facilitator superfamily MFS_1; SPTR: Putative uncharacterized protein; PFAM: Major Facilitator Superfamily
YP_004056910.1	InterPro IPR005135; KEGG: tme:Tmel_1637 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/Exonuclease/phosphatase family
YP_004056911.1	COGs: COG0442 Prolyl-tRNA synthetase; InterProIPR002314: IPR004154: IPR016061: IPR002316: IPR 004499: IPR006195; KEGG: tth:TTC1889 prolyl-tRNA synthetase; PFAM: Anticodon-binding domain protein; tRNA synthetase class II (G H P and S); Prolyl-tRNA synthetase, class II-like; PRIAM: Proline--tRNA ligase; SPTR: Prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); Prolyl-tRNA synthetase, C-terminal; TIGRFAM: prolyl-tRNA synthetase, family I
YP_004056912.1	COGs: COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain; InterPro IPR000182: IPR003439: IPR003593; KEGG: ttj:TTHA0114 ABC transporter ATP-binding protein; PFAM: ABC transporter related; GCN5-related N-acetyltransferase; SMART: AAA ATPase; SPTR: ABC transporter ATP-binding protein; PFAM: ABC transporter; Acetyltransferase (GNAT) family
YP_004056913.1	InterPro IPR007374; KEGG: ttj:TTHA0113 hypothetical protein; PFAM: protein of unknown function DUF437; SPTR: Hypothetical conserved protein; PFAM: ASCH domain
YP_004056914.1	COGs: COG0177 EndoIII-related endonuclease; InterProIPR003265: IPR003651: IPR005759: IPR004035: IPR 004036; KEGG: tth:TTC1892 endonuclease III; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SMART: HhH-GPD family protein; iron-sulfur cluster loop; SPTR: Endonuclease III; TIGRFAM: endonuclease III; PFAM: HhH-GPD superfamily base excision DNA repair protein; Iron-sulfur binding domain of endonuclease III; TIGRFAM: endonuclease III
YP_004056915.1	COGs: COG1579 Zn-ribbon protein possibly nucleic acid-binding; InterPro IPR003743; KEGG: msv:Mesil_0025 protein of unknown function DUF164; PFAM: protein of unknown function DUF164; SPTR: Putative uncharacterized protein; PFAM: Putative zinc ribbon domain
YP_004056916.1	KEGG: tro:trd_A0208 flagellin; SPTR: Flagellin
YP_004056917.1	KEGG: tpr:Tpau_1601 ABC transporter; SPTR: ABC transporter
YP_004056918.1	KEGG: geo:Geob_1618 NHL repeat containing protein; SPTR: NHL repeat containing protein
YP_004056919.1	COGs: COG3903 ATPase; InterPro IPR001440: IPR019734: IPR013026; KEGG: msv:Mesil_3477 hypothetical protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Putative uncharacterized protein; PFAM: Tetratricopeptide repeat
YP_004056920.1	COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: msv:Mesil_0008 LmbE family protein; PFAM: LmbE family protein; SPTR: LmbE family protein; PFAM: GlcNAc-PI de-N-acetylase
YP_004056921.1	COGs: COG1371 conserved hypothetical protein; InterPro IPR002804; KEGG: ttj:TTHA1745 hypothetical protein; PFAM: protein of unknown function DUF101; SPTR: Putative uncharacterized protein; PFAM: Archease protein family (DUF101/UPF0211)
YP_004056922.1	COGs: COG1690 conserved hypothetical protein; InterPro IPR001233; KEGG: tth:TTC1426 RtcB protein; PFAM: protein of unknown function UPF0027; SPTR: RtcB protein; PFAM: Uncharacterized protein family UPF0027
YP_004056923.1	COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005834: IPR005833: IPR006402: IPR006439; KEGG: dge:Dgeo_1288 HAD family hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: HAD-superfamily hydrolase subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; Epoxide hydrolase N-terminal domain-like phosphatase; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
YP_004056924.1	KEGG: msv:Mesil_0326 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3208)
YP_004056925.1	COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterPro IPR007197: IPR010723: IPR006638; KEGG: sat:SYN_01802 coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; PRIAM: Coproporphyrinogen dehydrogenase; SMART: Elongator protein 3/MiaB/NifB; SPTR: Coproporphyrinogen oxidase (NAD); PFAM: Radical SAM superfamily; HemN C-terminal region
YP_004056926.1	COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR013027; KEGG: tth:TTC1399 sulfide dehydrogenase (flavocytochrome c); PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Sulfide dehydrogenase (Flavocytochrome C); PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_004056927.1	InterPro IPR012440; KEGG: tth:TTC1398 hypothetical protein; PFAM: protein of unknown function DUF1641; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1641)
YP_004056928.1	KEGG: msv:Mesil_0854 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056929.1	KEGG: msv:Mesil_0853 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056930.1	KEGG: ttj:TTHA1862 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056931.1	InterPro IPR004843: IPR011152; KEGG: msv:Mesil_0649 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase
YP_004056932.1	COGs: COG2812 DNA polymerase III gamma/tau subunits; KEGG: mrb:Mrub_1761 DNA polymerase III subunits gamma/tau; SPTR: DNA polymerase III gamma/tau subunits
YP_004056933.1	COGs: COG1774 Uncharacterized homolog of PSP1; InterPro IPR007557; KEGG: msv:Mesil_0647 PSP1 domain protein; PFAM: PSP1 domain protein; SPTR: PSP1 domain protein; PFAM: PSP1 C-terminal conserved region
YP_004056934.1	COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family; InterPro IPR002563; KEGG: ttj:TTHA1858 oxidoreductase; PFAM: flavin reductase domain protein FMN-binding; SPTR: Flavoredoxin; PFAM: Flavin reductase like domain
YP_004056935.1	KEGG: msv:Mesil_0646 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056936.1	COGs: COG1079 ABC-type transport system permease component; InterPro IPR001851; KEGG: msv:Mesil_0639 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component
YP_004056937.1	COGs: COG4603 ABC-type uncharacterized transport system permease component; InterPro IPR001851; KEGG: mrb:Mrub_1651 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)
YP_004056938.1	COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR004033; KEGG: ttj:TTHA1854 ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; SPTR: Ubiquinone/menaquinone biosynthesis methyltransferase; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: ubiE/COQ5 methyltransferase family; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases
YP_004056939.1	KEGG: msv:Mesil_0633 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056940.1	COGs: COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division; InterPro IPR002218: IPR000103: IPR013027; KEGG: msv:Mesil_0269 glucose-inhibited division protein A; PFAM: glucose-inhibited division protein A; SPTR: Glucose-inhibited division protein A; PFAM: Glucose inhibited division protein A
YP_004056941.1	COGs: COG1194 A/G-specific DNA glycosylase; InterPro IPR005760: IPR003265: IPR003651; KEGG: mrb:Mrub_2826 A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; SMART: HhH-GPD family protein; iron-sulfur cluster loop; SPTR: A/G-specific adenine glycosylase; TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD superfamily base excision DNA repair protein; Iron-sulfur binding domain of endonuclease III; Helix-hairpin-helix motif; TIGRFAM: A/G-specific adenine glycosylase
YP_004056942.1	KEGG: dge:Dgeo_0251 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; SPTR: Putative uncharacterized protein
YP_004056943.1	KEGG: mfa:Mfla_1533 protein of unknown function DUF861, cupin_3; SPTR: Putative uncharacterized protein
YP_004056944.1	COGs: COG1832 CoA-binding protein; InterPro IPR003781; KEGG: ttj:TTHA1899 hypothetical protein; PFAM: CoA-binding domain protein; SPTR: CoA-binding domain protein
YP_004056945.1	COGs: COG1738 conserved hypothetical protein; InterPro IPR003744; KEGG: mrb:Mrub_2753 hypothetical protein; PFAM: protein of unknown function DUF165; SPTR: Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein; PFAM: Uncharacterized ACR, YhhQ family COG1738; TIGRFAM: conserved hypothetical integral membrane protein
YP_004056946.1	COGs: COG0634 Hypoxanthine-guanine phosphoribosyltransferase; InterPro IPR005904: IPR000836; KEGG: ttj:TTHA0220 hypoxanthine-guanine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; PRIAM: Hypoxanthine phosphoribosyltransferase; SPTR: Hypoxanthine-guanine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase
YP_004056947.1	COGs: COG2107 periplasmic solute-binding protein; KEGG: mrb:Mrub_0885 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Putative periplasminc binding protein (DUF178)
YP_004056948.1	COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR013027; KEGG: mrb:Mrub_2848 FAD-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_004056949.1	COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595: IPR012318: IPR001808; KEGG: mrb:Mrub_0884 Crp/Fnr family transcriptional regulator; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp; SPTR: Transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain
YP_004056950.1	COGs: COG4365 conserved hypothetical protein; InterPro IPR011199; KEGG: msv:Mesil_2832 protein of unknown function UCP012535; PFAM: protein of unknown function UCP012535; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2317)
YP_004056951.1	COGs: COG2385 Sporulation protein and related protein; InterPro IPR013486: IPR013693; KEGG: mrb:Mrub_2359 SpoIID/LytB domain-containing protein; PFAM: Stage II sporulation protein D; SPTR: SpoIID/LytB domain protein; TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation protein; TIGRFAM: SpoIID/LytB domain
YP_004056952.1	COGs: COG1432 conserved hypothetical protein; KEGG: msv:Mesil_2661 protein of unknown function DUF88; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF88
YP_004056953.1	InterPro IPR001123; KEGG: msv:Mesil_2660 lysine exporter protein (LysE/YggA); PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: Lysine exporter protein (LYSE/YGGA); PFAM: LysE type translocator
YP_004056954.1	KEGG: ttj:TTHA0073 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056955.1	COGs: COG0513 Superfamily II DNA and RNA helicase; InterProIPR011545: IPR001650: IPR014021: IPR014014: IPR 000629: IPR014001; KEGG: tra:Trad_2113 DEAD/DEAH box helicase domain protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: DEAD/DEAH box helicase domain protein; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase
YP_004056956.1	KEGG: dfe:Dfer_4525 parallel beta-helix repeat protein; SPTR: Putative uncharacterized protein
YP_004056957.1	KEGG: tgo:TGME49_028650 sec7 domain-containing protein; SPTR: Endonuclease/exonuclease/phosphatase
YP_004056958.1	COGs: COG0449 Glucosamine 6-phosphate synthetase contains amidotransferase and phosphosugar isomerase domains; InterPro IPR005855: IPR000583: IPR001347: IPR017932; KEGG: mrb:Mrub_2991 glucosamine/fructose-6-phosphate aminotransferase isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); SPTR: Glucosamine/fructose-6-phosphate aminotransferase, isomerizing; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing)
YP_004056959.1	InterPro IPR001119: IPR001412: IPR020845; KEGG: tth:TTC1532 S-layer protein; PFAM: S-layer domain-containing protein; SPTR: S-layer protein; PFAM: S-layer homology domain
YP_004056960.1	InterPro IPR013026; KEGG: rrs:RoseRS_0687 TPR repeat-containing protein; SPTR: Tetratricopeptide TPR_2 repeat protein
YP_004056961.1	COGs: COG0556 Helicase subunit of the DNA excision repair complex; InterProIPR004807: IPR006935: IPR001650: IPR001943: IPR 014021: IPR014001; KEGG: msv:Mesil_0110 excinuclease ABC, B subunit; PFAM: helicase domain protein; type III restriction protein res subunit; UvrB/UvrC protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: Excinuclease ABC, B subunit; TIGRFAM: excinuclease ABC, B subunit; PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit
YP_004056962.1	InterPro IPR004167; KEGG: mrb:Mrub_0108 E3 binding domain-containing protein; PFAM: E3 binding domain protein; SPTR: E3 binding domain protein; PFAM: e3 binding domain
YP_004056963.1	COGs: COG2309 Leucyl aminopeptidase (aminopeptidase T); InterPro IPR000787; KEGG: tth:TTC1529 aminopeptidase; PFAM: peptidase M29 aminopeptidase II; SPTR: Aminopeptidase; PFAM: Thermophilic metalloprotease (M29)
YP_004056964.1	COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR018392: IPR000064: IPR002482; KEGG: ttj:TTHA0266 cell wall-binding endopeptidase-related protein; PFAM: NLP/P60 protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: Cell wall-binding endopeptidase-related protein; PFAM: NlpC/P60 family; LysM domain
YP_004056965.1	COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR006153; KEGG: msv:Mesil_0120 sodium/hydrogen exchanger; PFAM: sodium/hydrogen exchanger; SPTR: Sodium/hydrogen exchanger; PFAM: Sodium/hydrogen exchanger family; TC 2.A.37
YP_004056966.1	InterPro IPR000644; KEGG: ttj:TTHA1473 hypothetical protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; SPTR: Putative uncharacterized protein; PFAM: CBS domain
YP_004056967.1	COGs: COG2230 Cyclopropane fatty acid synthase and related methyltransferase; InterPro IPR003333; KEGG: msv:Mesil_2649 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; PRIAM: Cyclopropane-fatty-acyl-phospholipid synthase; SPTR: Cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase
YP_004056968.1	KEGG: tbd:Tbd_0892 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056969.1	COGs: COG1404 Subtilisin-like serine protease; InterPro IPR010259: IPR000209; KEGG: msv:Mesil_0312 peptidase S8 and S53 subtilisin kexin sedolisin; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; proteinase inhibitor I9 subtilisin propeptide; SPTR: Thermophilic protease; PFAM: Peptidase inhibitor I9; Subtilase family
YP_004056970.1	InterPro IPR006626; KEGG: pin:Ping_0445 colicin uptake-like protein; SPTR: Putative uncharacterized protein
YP_004056971.1	KEGG: pin:Ping_0445 colicin uptake-like protein; SPTR: Membrane protein involved in colicin uptake-like protein
YP_004056972.1	InterPro IPR006626; KEGG: ppd:Ppro_2850 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056973.1	COGs: COG1329 Transcriptional regulators similar to M. xanthus CarD; InterPro IPR003711; KEGG: tth:TTC1818 transcriptional regulator; PFAM: transcription factor CarD; SPTR: Transcriptional regulator; PFAM: CarD-like/TRCF domain
YP_004056974.1	InterPro IPR001647; KEGG: mrb:Mrub_0464 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_004056975.1	COGs: COG4242 Cyanophycinase and related exopeptidase; KEGG: ttj:TTHA0166 hypothetical protein; SPTR: Cyanophycinase
YP_004056976.1	COGs: COG3191 L-aminopeptidase/D-esterase; InterPro IPR005321; KEGG: dra:DR_0782 hypothetical protein; PFAM: peptidase S58 DmpA; SPTR: Putative uncharacterized protein; PFAM: Peptidase family S58
YP_004056977.1	COGs: COG0802 ATPase or kinase; InterPro IPR003442; KEGG: mrb:Mrub_0046 hypothetical protein; PFAM: Uncharacterised protein family UPF0079, ATPase; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family
YP_004056978.1	KEGG: mrb:Mrub_0800 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056979.1	KEGG: mrb:Mrub_0248 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056980.1	KEGG: msv:Mesil_0380 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056981.1	COGs: COG0314 Molybdopterin converting factor large subunit; InterPro IPR003749: IPR003448; KEGG: tth:TTC1947 molybdopterin (MPT) converting factor, subunit 2; PFAM: molybdopterin biosynthesis MoaE protein; thiamineS protein; SPTR: Molybdopterin converting factor, subunit 1; PFAM: ThiS family; MoaE protein; TIGRFAM: molybdopterin converting factor, subunit 1, non-archaeal
YP_004056982.1	COGs: COG1420 Transcriptional regulator of heat shock gene; InterPro IPR002571: IPR001034; KEGG: msv:Mesil_0015 heat-inducible transcription repressor HrcA; SMART: regulatory protein DeoR; SPTR: Heat-inducible transcription repressor HrcA; PFAM: HTH domain; HrcA protein C terminal domain; TIGRFAM: heat shock gene repressor HrcA
YP_004056983.1	COGs: COG2309 Leucyl aminopeptidase (aminopeptidase T); InterPro IPR000787; KEGG: dge:Dgeo_0071 peptidase M29, aminopeptidase II; PFAM: peptidase M29 aminopeptidase II; SPTR: Peptidase M29, aminopeptidase II; PFAM: Thermophilic metalloprotease (M29)
YP_004056984.1	COGs: COG2865 transcriptional regulator protein; KEGG: ttj:TTHA0055 ATP-dependent DNA helicase RecG-related protein; SPTR: ATP-dependent DNA helicase recG-related protein
YP_004056985.1	COGs: COG0004 Ammonia permease; InterPro IPR001905: IPR018047; KEGG: ttj:TTHA0056 ammonium transporter; PFAM: ammonium transporter; SPTR: Ammonium transporter; TIGRFAM: ammonium transporter; PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter; TC 1.A.11
YP_004056986.1	COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187: IPR017918; KEGG: ttj:TTHA0057 nitrogen regulatory protein P-II; PFAM: nitrogen regulatory protein P-II; SPTR: Nitrogen regulatory protein p-II; PFAM: Nitrogen regulatory protein P-II
YP_004056987.1	COGs: COG1307 conserved hypothetical protein; InterPro IPR003797; KEGG: tth:TTC0532 DegV protein; PFAM: DegV family protein; SPTR: DegV protein; PFAM: Uncharacterised protein, DegV family COG1307; TIGRFAM: EDD domain protein, DegV family
YP_004056988.1	COGs: COG0171 NAD synthase; InterPro IPR003694; KEGG: ttj:TTHA1900 NH(3)-dependent NAD(+) synthetase; SPTR: NH(3)-dependent NAD(+) synthetase; TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; TIGRFAM: NAD+ synthetase
YP_004056989.1	COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: msv:Mesil_0276 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Carbon-nitrogen hydrolase
YP_004056990.1	COGs: COG2905 signal-transduction protein containing cAMP-binding and CBS domains; InterPro IPR000644; KEGG: msv:Mesil_0100 signal transduction protein with CBS domains; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; SPTR: Putative signal transduction protein with CBS domains; PFAM: CBS domain
YP_004056991.1	COGs: COG1647 Esterase/lipase; KEGG: tth:TTC1341 carboxylesterase; SPTR: Carboxylesterase
YP_004056992.1	KEGG: msv:Mesil_0879 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004056993.1	COGs: COG1115 Na+/alanine symporter; InterPro IPR001463; KEGG: mrb:Mrub_0450 amino acid carrier protein; PFAM: sodium:alanine symporter; SPTR: Amino acid carrier protein; TIGRFAM: amino acid carrier protein; PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein
YP_004056994.1	COGs: COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase; InterPro IPR004507: IPR003382; KEGG: ttj:TTHA1917 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; SPTR: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; manually curated; PFAM: Flavoprotein; TIGRFAM: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases
YP_004056995.1	COGs: COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase; InterPro IPR001228: IPR018294; KEGG: mrb:Mrub_0453 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; SPTR: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
YP_004056996.1	COGs: COG1018 Flavodoxin reductase (ferredoxin-NADPH reductase) family 1; InterPro IPR008333: IPR001433: IPR017927: IPR001709; KEGG: pph:Ppha_1120 oxidoreductase FAD/NAD(P)-binding domain protein; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; SPTR: Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region; PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain
YP_004056997.1	COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase; InterPro IPR013154: IPR013149: IPR002328; KEGG: bpu:BPUM_1170 L-iditol 2-dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; SPTR: Similar to sorbitol dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase
YP_004056998.1	COGs: COG1830 DhnA-type fructose-1 6-bisphosphate aldolase; InterPro IPR002915: IPR006130: IPR013838; KEGG: nmr:Nmar_1078 fructose-bisphosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; SPTR: Fructose-bisphosphate aldolase; PFAM: DeoC/LacD family aldolase
YP_004056999.1	COGs: COG0036 Pentose-5-phosphate-3-epimerase; InterPro IPR000056; KEGG: mrb:Mrub_2874 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; PRIAM: Ribulose-phosphate 3-epimerase; SPTR: Ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase
YP_004057000.1	COGs: COG4857 kinase; InterPro IPR009212: IPR002575; KEGG: dap:Dacet_2107 5-methylthioribose kinase; PFAM: aminoglycoside phosphotransferase; PRIAM: S-methyl-5-thioribose kinase; SPTR: 5-methylthioribose kinase; TIGRFAM: 5-methylthioribose kinase; PFAM: Phosphotransferase enzyme family; TIGRFAM: 5-methylthioribose kinase
YP_004057001.1	COGs: COG0182 translation initiation factor 2B subunit eIF-2B alpha/beta/delta family; InterPro IPR005251: IPR011559: IPR000649; KEGG: dak:DaAHT2_2001 translation initiation factor, aIF-2BI family; PFAM: initiation factor 2B related; PRIAM: S-methyl-5-thioribose-1-phosphate isomerase; SPTR: Initiation factor 2B alpha/beta/delta; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: Initiation factor 2 subunit family; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized proteins; S-methyl-5-thioribose-1-phosphate isomerase
YP_004057002.1	COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: mta:Moth_0701 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component
YP_004057003.1	COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439: IPR017871: IPR003593; KEGG: mta:Moth_0700 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter
YP_004057004.1	COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR006311: IPR017909; KEGG: mta:Moth_0699 ABC transporter substrate-binding protein; SPTR: ABC transporter substrate-binding protein; PFAM: family
YP_004057005.1	COGs: COG1737 Transcriptional regulators; InterPro IPR000281: IPR001347; KEGG: bbe:BBR47_27320 transcriptional regulator; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); SPTR: Transcriptional regulator (RpiR family) protein; PFAM: Helix-turn-helix domain, rpiR family; SIS domain
YP_004057006.1	COGs: COG1489 DNA-binding protein stimulates sugar fermentation; InterPro IPR005224; KEGG: bts:Btus_2635 sugar fermentation stimulation protein; PFAM: sugar fermentation stimulation protein; SPTR: Sugar fermentation stimulation protein homolog; PFAM: Sugar fermentation stimulation protein; TIGRFAM: sugar fermentation stimulation protein
YP_004057007.1	COGs: COG3705 ATP phosphoribosyltransferase involved in histidine biosynthesis; InterPro IPR004517: IPR002314: IPR004516: IPR006195; KEGG: mrb:Mrub_2834 histidyl-tRNA synthetase 2; PFAM: tRNA synthetase class II (G H P and S); PRIAM: Histidine--tRNA ligase; SPTR: Histidyl-tRNA synthetase 2; TIGRFAM: histidyl-tRNA synthetase 2; PFAM: tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: ATP phosphoribosyltransferase, regulatory subunit
YP_004057008.1	COGs: COG0040 ATP phosphoribosyltransferase; InterPro IPR013820: IPR018198; KEGG: ttj:TTHA0128 ATP phosphoribosyltransferase catalytic subunit; PFAM: ATP phosphoribosyltransferase catalytic region; PRIAM: ATP phosphoribosyltransferase; SPTR: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase
YP_004057009.1	COGs: COG0566 rRNA methylase; InterPro IPR001537; KEGG: ttj:TTHA0127 tRNA (guanosine-2'-O-) methyltransferase; PFAM: tRNA/rRNA methyltransferase (SpoU); PRIAM: tRNA guanosine-2'-O-methyltransferase; SPTR: tRNA guanosine-2'-O-methyltransferase; PFAM: SpoU rRNA Methylase family; SpoU, rRNA methylase, C-terminal
YP_004057010.1	InterPro IPR019776; KEGG: msv:Mesil_2153 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057011.1	COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR006439: IPR005834: IPR005833; KEGG: msv:Mesil_1054 HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: HAD-superfamily hydrolase, subfamily IA, variant 1; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
YP_004057012.1	COGs: COG0015 Adenylosuccinate lyase; InterProIPR004769: IPR000362: IPR019468: IPR003031: IPR 020557; KEGG: msv:Mesil_1058 adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase-like; SPTR: Adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase
YP_004057013.1	KEGG: rrs:RoseRS_4504 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057014.1	COGs: COG1322 conserved hypothetical protein; InterPro IPR003798; KEGG: kol:Kole_0848 protein of unknown function DUF195; PFAM: protein of unknown function DUF195; SPTR: Putative uncharacterized protein; PFAM: RmuC family
YP_004057015.1	COGs: COG3369 conserved hypothetical protein; InterPro IPR018967: IPR006622; KEGG: mrb:Mrub_2157 zinc finger CDGSH-type domain-containing protein; PFAM: Iron sulphur-containing domain, CDGSH-type; SPTR: Zinc finger CDGSH-type domain protein; PFAM: Iron-binding zinc finger CDGSH type
YP_004057016.1	InterPro IPR019012; KEGG: cag:Cagg_1663 hypothetical protein; PFAM: RNA cap guanine-N2 methyltransferase; SPTR: Putative uncharacterized protein; PFAM: RNA cap guanine-N2 methyltransferase
YP_004057017.1	KEGG: ank:AnaeK_2647 CheA signal transduction histidine kinase; SPTR: Putative CheA signal transduction histidine kinase
YP_004057018.1	COGs: COG0432 conserved hypothetical protein; InterPro IPR001602; KEGG: bha:BH3498 hypothetical protein; PFAM: protein of unknown function UPF0047; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme
YP_004057019.1	COGs: COG1836 membrane protein; InterPro IPR002794; KEGG: msv:Mesil_0376 protein of unknown function DUF92 transmembrane; PFAM: protein of unknown function DUF92 transmembrane; SPTR: Putative uncharacterized protein; PFAM: Integral membrane protein DUF92
YP_004057020.1	COGs: COG0317 Guanosine polyphosphate pyrophosphohydrolase/synthetase; InterProIPR004811: IPR006674: IPR007685: IPR004095: IPR 002912: IPR003607; KEGG: msv:Mesil_0377 (p)ppGpp synthetase I, SpoT/RelA; PFAM: RelA/SpoT domain protein; metal-dependent phosphohydrolase HD sub domain; TGS domain-containing protein; amino acid-binding ACT domain protein; PRIAM: GTP diphosphokinase; SMART: metal-dependent phosphohydrolase HD region; SPTR: (P)ppGpp synthetase I, SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: HD domain; ACT domain; Region found in RelA / SpoT proteins; TGS domain; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family
YP_004057021.1	COGs: COG1171 Threonine dehydratase; InterPro IPR001926; KEGG: tro:trd_0006 threonine ammonia-lyase, biosynthetic; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Threonine ammonia-lyase, biosynthetic; PFAM: Pyridoxal-phosphate dependent enzyme
YP_004057022.1	KEGG: scl:sce8854 secreted protein; SPTR: Putative secreted protein
YP_004057023.1	KEGG: swi:Swit_4521 membrane-like protein; SPTR: Membrane-like protein; PFAM: Predicted membrane protein (DUF2207)
YP_004057024.1	InterPro IPR018702: IPR000276; KEGG: tai:Taci_0514 membrane-like protein; PFAM: Protein of unknown function DUF2207, membrane; SPTR: Membrane-like protein; PFAM: Predicted membrane protein (DUF2207)
YP_004057025.1	COGs: COG1704 conserved hypothetical protein; InterPro IPR007156; KEGG: dba:Dbac_2637 LemA family protein; PFAM: LemA family protein; SPTR: LemA family protein; PFAM: LemA family
YP_004057026.1	COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: ttj:TTHA0746 iron ABC transporter, substrate-binding protein; PFAM: periplasmic binding protein; SPTR: Iron ABC transporter, substrate-binding protein; PFAM: Periplasmic binding protein
YP_004057027.1	COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: ttj:TTHA0747 iron ABC transporter, permease protein; PFAM: ABC transporter permease; SPTR: Transport system permease protein; PFAM: FecCD transport family
YP_004057028.1	COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003439: IPR017871: IPR003593; KEGG: tth:TTC0392 iron(III) dicitrate transport ATP-binding protein FecE; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Iron(III) dicitrate transport ATP-binding protein fecE; PFAM: ABC transporter
YP_004057029.1	KEGG: mrb:Mrub_0232 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057030.1	COGs: COG2109 ATP:corrinoid adenosyltransferase; InterPro IPR003724; KEGG: tra:Trad_0380 cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; PRIAM: Cob(I)yrinic acid a,c-diamide adenosyltransferase; SPTR: Cob(I)alamin adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; TIGRFAM: cob(I)alamin adenosyltransferase
YP_004057031.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: sli:Slin_3239 alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold
YP_004057032.1	COGs: COG1797 Cobyrinic acid a c-diamide synthase; InterPro IPR004484: IPR011698: IPR017929; KEGG: ttj:TTHB043 cobyrinic acid a,c-diamide synthase; PFAM: CobB/CobQ domain protein glutamine amidotransferase; SPTR: Cobyrinic acid a,c-diamide synthase; TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyrinic acid a,c-diamide synthase
YP_004057033.1	COGs: COG1270 Cobalamin biosynthesis protein CobD/CbiB; InterPro IPR004485; KEGG: ajs:Ajs_3180 adenosylcobinamide-phosphate synthase; PFAM: cobalamin biosynthesis protein CbiB; SPTR: Adenosylcobinamide-phosphate synthase; TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: CobD/Cbib protein; TIGRFAM: cobalamin biosynthesis protein CobD
YP_004057034.1	COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; InterPro IPR004839; KEGG: msv:Mesil_3402 hypothetical protein; PFAM: aminotransferase class I and II; SPTR: Putative uncharacterized protein; PFAM: Aminotransferase class I and II
YP_004057035.1	KEGG: set:SEN2614 hypothetical protein; SPTR: Predicted protein
YP_004057036.1	COGs: COG0406 Fructose-2 6-bisphosphatase; InterPro IPR013078: IPR001345; KEGG: mrb:Mrub_0234 phosphoglycerate mutase; PFAM: Phosphoglycerate mutase; SPTR: Phosphoglycerate mutase; PFAM: Phosphoglycerate mutase family
YP_004057037.1	COGs: COG1492 Cobyric acid synthase; InterPro IPR004459: IPR011698: IPR003203: IPR017929; KEGG: tra:Trad_0376 cobyric acid synthase CobQ; PFAM: CobB/CobQ domain protein glutamine amidotransferase; cobalbumin biosynthesis protein; PRIAM: Adenosylcobinamide-phosphate guanylyltransferase; SPTR: Cobyric acid synthase CobQ; TIGRFAM: cobyric acid synthase CobQ; PFAM: Cobinamide kinase / cobinamide phosphate guanyltransferase; CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyric acid synthase CobQ
YP_004057038.1	COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182; KEGG: ava:Ava_1239 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family
YP_004057039.1	InterPro IPR003088: IPR009056; KEGG: tth:TTC1058 cytochrome c-552 precursor; PFAM: cytochrome c class I; SPTR: Cytochrome c-552; PFAM: Cytochrome c
YP_004057040.1	COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: dge:Dgeo_2917 ABC-type sugar transport system, permease component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: ABC-type sugar transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004057041.1	COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: kol:Kole_0692 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004057042.1	COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: bha:BH1864 hypothetical protein; PFAM: extracellular solute-binding protein family 1; SPTR: BH1864 protein; PFAM: Bacterial extracellular solute-binding protein
YP_004057043.1	COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764: IPR019800; KEGG: msv:Mesil_0282 beta-N-acetylhexosaminidase; PFAM: glycoside hydrolase family 3 domain protein; SPTR: Beta-N-acetylhexosaminidase; PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain
YP_004057044.1	COGs: COG2103 sugar phosphate isomerase; InterPro IPR001347; KEGG: met:M446_0496 N-acetylmuramic acid-6-phosphate etherase; PFAM: sugar isomerase (SIS); SPTR: Sugar isomerase (SIS); PFAM: SIS domain; TIGRFAM: N-acetylmuramic acid 6-phosphate etherase
YP_004057045.1	COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: msv:Mesil_2590 beta-lactamase; PFAM: beta-lactamase; SPTR: Beta-lactamase; PFAM: Beta-lactamase
YP_004057046.1	COGs: COG2188 Transcriptional regulators; InterPro IPR000524: IPR011663; KEGG: msv:Mesil_2586 transcriptional regulator, GntR family; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: Transcriptional regulator, GntR family; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain
YP_004057047.1	COGs: COG2377 molecular chaperone distantly related to HSP70-fold metalloprotease; InterPro IPR005338; KEGG: msv:Mesil_2585 protein of unknown function UPF0075; PFAM: protein of unknown function UPF0075; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0075)
YP_004057048.1	KEGG: aeh:Mlg_0623 ArsR family transcriptional regulator; SPTR: Transcriptional regulator, ArsR family
YP_004057049.1	COGs: COG2038 NaMN:DMB phosphoribosyltransferase; InterPro IPR017846: IPR003200; KEGG: mrb:Mrub_0236 nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; PRIAM: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; SPTR: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM:nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
YP_004057050.1	COGs: COG0368 Cobalamin-5-phosphate synthase; InterPro IPR003805; KEGG: msv:Mesil_3406 hypothetical protein; PFAM: cobalamin-5-phosphate synthase CobS; SPTR: Putative uncharacterized protein; TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: Cobalamin-5-phosphate synthase; TIGRFAM: cobalamin 5'-phosphate synthase/cobalamin synthase
YP_004057051.1	COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: tra:Trad_0588 extracellular solute-binding protein family 1; PFAM: extracellular solute-binding protein family 1; SPTR: Extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding protein
YP_004057052.1	COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: tra:Trad_0587 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004057053.1	COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515: IPR010916; KEGG: dge:Dgeo_2664 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: ABC-type sugar transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004057054.1	COGs: COG0584 Glycerophosphoryl diester phosphodiesterase; InterPro IPR004129; KEGG: msv:Mesil_3189 glycerophosphoryl diester phosphodiesterase; PFAM: glycerophosphoryl diester phosphodiesterase; SPTR: Glycerophosphoryl diester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase family
YP_004057055.1	KEGG: ton:TON_1352 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057057.1	COGs: COG0518 GMP synthase - Glutamine amidotransferase domain; InterPro IPR000991: IPR017926; KEGG: azc:AZC_4594 glutamine amidotransferase; PFAM: glutamine amidotransferase class-I; SPTR: Cysteine protease family C26, putative; PFAM: Glutamine amidotransferase class-I
YP_004057058.1	COGs: COG0584 Glycerophosphoryl diester phosphodiesterase; InterPro IPR004129; KEGG: dat:HRM2_19000 GlpQ1; PFAM: glycerophosphoryl diester phosphodiesterase; SPTR: GlpQ1; PFAM: Glycerophosphoryl diester phosphodiesterase family
YP_004057059.1	COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764: IPR019800; KEGG: cvi:CV_0259 glycosy hydrolase family protein; PFAM: glycoside hydrolase family 3 domain protein; SPTR: HexI; PFAM: Glycosyl hydrolase family 3 N terminal domain
YP_004057060.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789: IPR000792; KEGG: tra:Trad_1782 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: Two component transcriptional regulator, LuxR family; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_004057061.1	COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003660: IPR011712: IPR003594: IPR005467; KEGG: tra:Trad_1796 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: Histidine kinase; PFAM: Histidine kinase; HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_004057062.1	COGs: COG3221 ABC-type phosphate/phosphonate transport system periplasmic component; InterPro IPR005770; KEGG: cag:Cagg_3670 phosphonate ABC transporter, periplasmic phosphonate-binding protein; SPTR: Phosphonate ABC transporter, periplasmic phosphonate-binding protein; TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; TIGRFAM: phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein
YP_004057063.1	COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR006311: IPR017896: IPR017900; KEGG: dev:DhcVS_113 molybdopterin oxidoreductase, iron-sulfur binding subunit; SPTR: Molybdopterin oxidoreductase, iron-sulfur binding subunit; PFAM: 4Fe-4S binding domain
YP_004057064.1	COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: sth:STH2082 molybdopterin oxidoreductase membrane subunit; PFAM: Polysulphide reductase NrfD; SPTR: Molybdopterin oxidoreductase membrane subunit; PFAM: Polysulphide reductase, NrfD
YP_004057065.1	COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterProIPR006311: IPR019546: IPR006656: IPR006657: IPR 017909; KEGG: ddf:DEFDS_1446 molybdopterin oxidoreductase molybdopterin-binding subunit; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase; Twin-arginine translocation pathway, signal sequence, subgroup; SPTR: Molybdopterin oxidoreductase, molybdopterin-binding subunit; PFAM: TAT (twin-arginine translocation) pathway signal sequence; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_004057066.1	COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR017730: IPR004176: IPR003959: IPR013093: IPR 019489: IPR001270: IPR018368: IPR003593; KEGG: msv:Mesil_0416 ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; SMART: AAA ATPase; SPTR: ATP-dependent chaperone ClpB; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB
YP_004057067.1	KEGG: mxa:MXAN_7195 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057068.1	InterPro IPR001434; KEGG: msv:Mesil_1689 conserved repeat domain protein; SPTR: Conserved repeat domain protein; TIGRFAM: conserved repeat domain protein; TIGRFAM: conserved repeat domain
YP_004057069.1	KEGG: msv:Mesil_1688 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Carbohydrate binding domain
YP_004057070.1	COGs: COG1341 GTPase or GTP-binding protein; KEGG: tth:TTC1826 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Molybdopterin guanine dinucleotide synthesis protein B
YP_004057071.1	COGs: COG1607 Acyl-CoA hydrolase; InterPro IPR006683; KEGG: ttj:TTHA1804 acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; SPTR: Acyl-CoA hydrolase; PFAM: Thioesterase superfamily
YP_004057072.1	KEGG: dba:Dbac_1674 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057073.1	COGs: COG4143 ABC-type thiamine transport system periplasmic component; InterPro IPR005948: IPR006059: IPR019775; KEGG: msv:Mesil_0885 ABC transporter periplasmic protein, ThiB subfamily; PFAM: extracellular solute-binding protein family 1; SPTR: ABC transporter; TIGRFAM: ABC transporter periplasmic protein, thiB subfamily; PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: ABC transporter periplasmic binding protein, thiB subfamily
YP_004057074.1	COGs: COG1178 ABC-type Fe3+ transport system permease component; InterPro IPR000515: IPR017871; KEGG: msv:Mesil_0886 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004057075.1	COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003439: IPR017871: IPR003593; KEGG: msv:Mesil_0930 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter; PFAM: ABC transporter
YP_004057076.1	COGs: COG1564 Thiamine pyrophosphokinase; InterPro IPR006282: IPR007371; KEGG: msv:Mesil_0929 thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase catalytic domain-containing protein; SPTR: Thiamine pyrophosphokinase; TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase, catalytic domain; TIGRFAM: thiamine pyrophosphokinase
YP_004057077.1	COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003439: IPR017871: IPR003593; KEGG: mrb:Mrub_0603 ABC transporter-like protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter; PFAM: ABC transporter
YP_004057078.1	KEGG: msv:Mesil_1113 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057079.1	COGs: COG0011 conserved hypothetical protein; InterPro IPR002767; KEGG: sul:SYO3AOP1_0962 protein of unknown function DUF77; PFAM: protein of unknown function DUF77; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF77; TIGRFAM: uncharacterized protein, MTH1187 family
YP_004057080.1	COGs: COG0516 IMP dehydrogenase/GMP reductase; InterProIPR005990: IPR001093: IPR000644: IPR018529: IPR 015875; KEGG: ttj:TTHA0432 IMP dehydrogenase/GMP reductase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein; PRIAM: IMP dehydrogenase; SMART: CBS domain containing protein; SPTR: Inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase
YP_004057081.1	KEGG: tra:Trad_0776 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057082.1	KEGG: msv:Mesil_0757 peptidase M28; SPTR: Peptidase M28; PFAM: Peptidase family M28
YP_004057083.1	COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: dma:DMR_44430 GGDEF domain protein; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: GGDEF domain protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_004057084.1	COGs: COG0414 Panthothenate synthetase; InterPro IPR003721; KEGG: ttj:TTHA1775 pantoate--beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase; SPTR: Pantothenate synthetase; TIGRFAM: pantoate/beta-alanine ligase; manually curated; PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase
YP_004057085.1	COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT; InterPro IPR006321: IPR001482: IPR003593; KEGG: mrb:Mrub_2223 twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase; SPTR: Twitching motility protein; TIGRFAM: twitching motility protein; PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT
YP_004057086.1	COGs: COG0191 Fructose/tagatose bisphosphate aldolase; InterPro IPR000771: IPR011289; KEGG: ttj:TTHA1773 fructose-1,6-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II; PRIAM: Fructose-bisphosphate aldolase; SPTR: Fructose-1,6-bisphosphate aldolase; TIGRFAM: fructose-1,6-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist
YP_004057087.1	KEGG: mrb:Mrub_0796 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057088.1	COGs: COG0213 Thymidine phosphorylase; InterProIPR018090: IPR017459: IPR000312: IPR013102: IPR 000053: IPR017872; KEGG: dge:Dgeo_2180 pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; Pyrimidine nucleoside phosphorylase domain; PRIAM: Pyrimidine-nucleoside phosphorylase; SPTR: Pyrimidine-nucleoside phosphorylase; TIGRFAM: pyrimidine-nucleoside phosphorylase; PFAM: Glycosyl transferase family, a/b domain; Pyrimidine nucleoside phosphorylase C-terminal domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: pyrimidine-nucleoside phosphorylase
YP_004057089.1	COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: msv:Mesil_0190 peptidase M23; PFAM: Peptidase M23; SPTR: Peptidase M23; PFAM: Peptidase family M23
YP_004057090.1	COGs: COG1664 Integral membrane protein CcmA involved in cell shape determination; InterPro IPR007607; KEGG: mrb:Mrub_2198 hypothetical protein; PFAM: protein of unknown function DUF583; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function, DUF583
YP_004057091.1	COGs: COG0777 Acetyl-CoA carboxylase beta subunit; InterPro IPR000438: IPR000022: IPR011762; KEGG: tth:TTC1409 acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; PFAM: carboxyl transferase; PRIAM: Acetyl-CoA carboxylase; SPTR: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit
YP_004057092.1	COGs: COG0825 Acetyl-CoA carboxylase alpha subunit; InterPro IPR001095: IPR020582: IPR011763; KEGG: ttj:TTHA1767 acetyl-CoA carboxylase carboxyltransferase subunit alpha; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region; PRIAM: Acetyl-CoA carboxylase; SPTR: Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit
YP_004057093.1	InterPro IPR013229; KEGG: ttj:TTHA1766 S-layer-like protein; PFAM: PEGA domain protein; SPTR: S-layer-like protein; PFAM: PEGA domain
YP_004057094.1	KEGG: ttj:TTHA0179 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057095.1	KEGG: msv:Mesil_0197 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057096.1	InterPro IPR017896: IPR000813: IPR017900; KEGG: ttj:TTHA0177 ferredoxin; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S binding domain
YP_004057097.1	COGs: COG4102 conserved hypothetical protein; InterPro IPR006311: IPR010869; KEGG: mrb:Mrub_2448 hypothetical protein; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501)
YP_004057098.1	COGs: COG5267 conserved hypothetical protein; InterPro IPR014917; KEGG: mrb:Mrub_2447 hypothetical protein; PFAM: protein of unknown function DUF1800; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1800)
YP_004057099.1	InterPro IPR006976; KEGG: msv:Mesil_0679 VanZ family protein; PFAM: VanZ family protein; SPTR: VanZ family protein; PFAM: VanZ like family
YP_004057100.1	InterPro IPR017515: IPR004360; KEGG: msv:Mesil_0680 methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Methylmalonyl-CoA epimerase; TIGRFAM: methylmalonyl-CoA epimerase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: methylmalonyl-CoA epimerase
YP_004057101.1	KEGG: efa:EF1738 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057102.1	KEGG: rrs:RoseRS_0652 regulatory protein, DeoR
YP_004057103.1	KEGG: aba:Acid345_4703 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1572)
YP_004057104.1	KEGG: amr:AM1_0196 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057105.1	COGs: COG1278 Cold shock protein; InterPro IPR002059: IPR012156: IPR019844: IPR011129; KEGG: msv:Mesil_0970 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; SPTR: Cold-shock DNA-binding domain protein; PFAM: 'Cold-shock' DNA-binding domain
YP_004057106.1	COGs: COG0495 Leucyl-tRNA synthetase; InterPro IPR002302: IPR002300: IPR013155: IPR001412; KEGG: tth:TTC1825 leucyl-tRNA synthetase; PFAM: tRNA synthetase valyl/leucyl anticodon-binding; aminoacyl-tRNA synthetase class Ia; SPTR: Leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family
YP_004057107.1	KEGG: ddr:Deide_15311 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057108.1	COGs: COG0789 transcriptional regulator protein; InterPro IPR000551: IPR015358; KEGG: msv:Mesil_1150 transcriptional regulator, MerR family; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR; SPTR: Transcriptional regulator, MerR family; PFAM: MerR family regulatory protein; MerR, DNA binding
YP_004057109.1	COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterProIPR011796: IPR006121: IPR013027: IPR004099: IPR 000815: IPR012999: IPR017969; KEGG: ttj:TTHA1153 mercuric reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Heavy metal transport/detoxification protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: Mercuric reductase; TIGRFAM: mercuric reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Heavy-metal-associated domain; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: mercuric reductase
YP_004057110.1	KEGG: msv:Mesil_0105 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057111.1	InterPro IPR011659: IPR002052; KEGG: tra:Trad_2492 hypothetical protein; PFAM: WD40-like beta Propeller containing protein; SPTR: Putative uncharacterized protein; PFAM: WD40-like Beta Propeller Repeat
YP_004057112.1	COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR006094: IPR004113: IPR016166; KEGG: mrb:Mrub_2162 FAD linked oxidase domain-containing protein; PFAM: FAD linked oxidase domain protein; SPTR: FAD linked oxidase domain protein; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD
YP_004057113.1	COGs: COG1801 conserved hypothetical protein; InterPro IPR002763; KEGG: pmx:PERMA_0651 hypothetical protein; PFAM: protein of unknown function DUF72; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF72
YP_004057114.1	InterPro IPR000086: IPR020476: IPR020084; KEGG: gob:Gobs_5080 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: NUDIX hydrolase; PFAM: NUDIX domain
YP_004057115.1	InterPro IPR002429; KEGG: pjd:Pjdr2_4978 hypothetical protein; PFAM: cytochrome c oxidase subunit II; SPTR: Cytochrome c oxidase, subunit II; PFAM: Cytochrome C oxidase subunit II, periplasmic domain
YP_004057116.1	InterPro IPR003834; KEGG: mhu:Mhun_3231 cytochrome c biogenesis protein, transmembrane region; PFAM: cytochrome c biogenesis protein transmembrane region; SPTR: Cytochrome c biogenesis protein, transmembrane region; PFAM: Cytochrome C biogenesis protein transmembrane region
YP_004057117.1	COGs: COG1113 Gamma-aminobutyrate permease and related permease; InterPro IPR004841: IPR002293; KEGG: nam:NAMH_1552 cationic amino acid transporter; PFAM: amino acid permease-associated region; SPTR: Cationic amino acid transporter; PFAM: Amino acid permease
YP_004057118.1	KEGG: rlt:Rleg2_3128 polysaccharide biosynthesis protein; SPTR: Polysaccharide biosynthesis protein
YP_004057119.1	COGs: COG3285 eukaryotic-type DNA primase; InterPro IPR014145: IPR002755; KEGG: sti:Sthe_0314 DNA polymerase LigD, polymerase domain protein; PFAM: DNA primase small subunit; SPTR: DNA polymerase LigD, polymerase domain protein; TIGRFAM: DNA polymerase LigD, polymerase domain protein; PFAM: Eukaryotic and archaeal DNA primase small subunit; TIGRFAM: DNA ligase D; DNA polymerase LigD, polymerase domain
YP_004057120.1	COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198: IPR002347: IPR020904; KEGG: ttj:TTHA0369 short chain dehydrogenase/reductase family oxidoreductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Dehydrogenase; PFAM: short chain dehydrogenase
YP_004057121.1	COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395: IPR005399; KEGG: ttj:TTHA0027 potassium channel, beta subunit (oxidoreductase); PFAM: aldo/keto reductase; SPTR: Probable potassium channel, beta subunit (Oxidoreductase); PFAM: Aldo/keto reductase family; TIGRFAM: voltage-dependent potassium channel beta subunit, animal
YP_004057122.1	KEGG: sun:SUN_1312 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Ergosterol biosynthesis ERG4/ERG24 family
YP_004057123.1	COGs: COG0843 Heme/copper-type cytochrome/quinol oxidase subunit 1; InterPro IPR014241: IPR000883: IPR000298; KEGG: tth:TTC1671 cytochrome c oxidase polypeptide I+III; PFAM: cytochrome c oxidase subunit I; cytochrome c oxidase subunit III; SPTR: Cytochrome c oxidase polypeptide I+III; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: Cytochrome c oxidase subunit III; Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, subunit I
YP_004057124.1	COGs: COG1622 Heme/copper-type cytochrome/quinol oxidase subunit 2; InterProIPR014222: IPR011759: IPR002429: IPR003088: IPR 009056: IPR001505; KEGG: tth:TTC1672 cytochrome c oxidase polypeptide II; PFAM: cytochrome c oxidase subunit II; cytochrome C oxidase subunit II transmembrane region; cytochrome c class I; SPTR: Cytochrome c oxidase subunit 2; TIGRFAM: cytochrome c oxidase, subunit II; PFAM: Cytochrome c; Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome C oxidase subunit II, transmembrane domain; TIGRFAM: cytochrome c oxidase, subunit II
YP_004057125.1	COGs: COG1622 Heme/copper-type cytochrome/quinol oxidase subunit 2; InterPro IPR002429: IPR003088: IPR009056; KEGG: ttj:TTHA0311 cytochrome caa3 oxidase subunit IIC; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; SPTR: Cytochrome c oxidase subunit 2; PFAM: Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome c
YP_004057126.1	COGs: COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor); InterPro IPR006369: IPR003780: IPR000537; KEGG: tth:TTC1673 protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; cytochrome oxidase assembly; SPTR: Protoheme IX farnesyltransferase; TIGRFAM: protoheme IX farnesyltransferase; PFAM: Cytochrome oxidase assembly protein; UbiA prenyltransferase family; TIGRFAM: protoheme IX farnesyltransferase
YP_004057127.1	COGs: COG1866 Phosphoenolpyruvate carboxykinase (ATP); InterPro IPR001272: IPR013838: IPR015994; KEGG: ttj:TTHA0278 phosphoenolpyruvate carboxykinase; PFAM: phosphoenolpyruvate carboxykinase (ATP); SPTR: Phosphoenolpyruvate carboxykinase [ATP]; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); PFAM: Phosphoenolpyruvate carboxykinase; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP)
YP_004057128.1	COGs: COG0586 membrane-associated protein; InterPro IPR015414; KEGG: msv:Mesil_0676 SNARE associated Golgi protein-like protein; PFAM: SNARE associated Golgi protein; SPTR: SNARE associated Golgi protein-like protein; PFAM: SNARE associated Golgi protein
YP_004057129.1	COGs: COG0530 Ca2+/Na+ antiporter; InterPro IPR004481: IPR004837; KEGG: tra:Trad_2429 Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; SPTR: Na+/Ca+ antiporter, CaCA family; TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: Sodium/calcium exchanger protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger related-protein
YP_004057130.1	KEGG: smb:smi_1241 heat shock protein, protease HtpX; SPTR: Heat shock protein HtpX
YP_004057131.1	COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR000086: IPR020476: IPR020084; KEGG: msv:Mesil_3106 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: NUDIX hydrolase; PFAM: NUDIX domain
YP_004057132.1	COGs: COG1488 Nicotinic acid phosphoribosyltransferase; InterPro IPR006405: IPR015977: IPR007229; KEGG: avn:Avin_46230 nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; SPTR: Nicotinate phosphoribosyltransferase; TIGRFAM: nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family; TIGRFAM: nicotinate phosphoribosyltransferase
YP_004057133.1	COGs: COG1703 Putative periplasmic protein kinase ArgK and related GTPase of G3E family; InterPro IPR005129; KEGG: mrb:Mrub_3009 LAO/AO transport system ATPase; PFAM: ArgK protein; SPTR: LAO/AO transport system ATPase; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; TIGRFAM: LAO/AO transport system ATPase
YP_004057134.1	COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016: IPR006015; KEGG: hth:HTH_1498 universal stress protein; PFAM: UspA domain-containing protein; SPTR: Universal stress protein; PFAM: Universal stress protein family
YP_004057135.1	COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR006056: IPR006175; KEGG: mrb:Mrub_3008 endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; SPTR: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative
YP_004057136.1	COGs: COG0631 Serine/threonine protein phosphatase; InterPro IPR014045: IPR001932; KEGG: msv:Mesil_3111 protein serine/threonine phosphatase; PFAM: Protein phosphatase 2C-like; PRIAM: Phosphoprotein phosphatase; SMART: protein phosphatase 2C domain protein; SPTR: Protein serine/threonine phosphatase; PFAM: Protein phosphatase 2C
YP_004057137.1	COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: dge:Dgeo_0591 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: ABC-type sugar transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein
YP_004057138.1	COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: ttj:TTHA0355 ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Maltose ABC transporter permease malF; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004057139.1	COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: dge:Dgeo_0589 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: ABC-type sugar transport system, permease component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004057140.1	COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR011611: IPR002173; KEGG: ace:Acel_2120 ribokinase-like domain-containing protein; PFAM: PfkB domain protein; SPTR: Ribokinase; PFAM: pfkB family carbohydrate kinase
YP_004057141.1	COGs: COG1501 Alpha-glucosidase family 31 of glycosyl hydrolase; InterPro IPR000322; KEGG: mrb:Mrub_2087 alpha-glucosidase; PFAM: glycoside hydrolase family 31; PRIAM: Alpha-glucosidase; SPTR: Alpha-glucosidase; PFAM: Glycosyl hydrolases family 31
YP_004057142.1	KEGG: yen:YE0554 aminoimidazole riboside kinase; SPTR: Sugar kinases, ribokinase family
YP_004057143.1	COGs: COG2317 Zn-dependent carboxypeptidase; InterPro IPR001333; KEGG: ttj:TTHA0270 carboxypeptidase; PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase; PRIAM: Carboxypeptidase Taq; SPTR: Thermostable carboxypeptidase 1; PFAM: Carboxypeptidase Taq (M32) metallopeptidase
YP_004057144.1	COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: sun:SUN_0891 dipeptide ABC transporter, substrate-binding protein; PFAM: extracellular solute-binding protein family 5; SPTR: Dipeptide ABC transporter, substrate-binding protein; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_004057145.1	COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: ddc:Dd586_2532 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004057146.1	COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: tau:Tola_2510 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004057147.1	COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933: IPR011650; KEGG: ttr:Tter_0255 peptidase M20; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: Peptidase M20; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain
YP_004057148.1	KEGG: sen:SACE_0460 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057149.1	KEGG: smd:Smed_3806 hypothetical protein; SPTR: Hypothetical membrane spanning protein; PFAM: SPW repeat
YP_004057150.1	InterPro IPR001647; KEGG: dal:Dalk_0754 transcriptional regulator, TetR family; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_004057151.1	InterPro IPR013525; KEGG: cya:CYA_1761 ABC transporter, permease protein; PFAM: ABC transporter; SPTR: Putative ABC transporter, permease protein; PFAM: ABC transporter
YP_004057152.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: cya:CYA_1762 drug exporter ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Drug exporter-1 ABC transporter (DrugE1) family, ATP-binding protein; PFAM: ABC transporter
YP_004057153.1	COGs: COG0693 Putative intracellular protease/amidase; InterPro IPR006286: IPR002818; KEGG: msv:Mesil_2922 ThiJ/PfpI domain protein; PFAM: ThiJ/PfpI domain-containing protein; SPTR: Putative amidotransferase; TIGRFAM: intracellular protease, PfpI family; PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease, PfpI family
YP_004057154.1	InterPro IPR000086: IPR020476; KEGG: msv:Mesil_2921 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: NUDIX hydrolase; PFAM: NUDIX domain
YP_004057155.1	COGs: COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain; InterPro IPR011551: IPR004518; KEGG: tth:TTC1583 nucleoside triphosphate pyrophosphohydrolase; PFAM: MazG nucleotide pyrophosphohydrolase; SPTR: MazG protein; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein
YP_004057156.1	COGs: COG1989 Type II secretory pathway prepilin signal peptidase PulO and related peptidase; InterPro IPR010627: IPR000045; KEGG: msv:Mesil_0392 peptidase A24A domain protein; PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; PRIAM: Prepilin peptidase; SPTR: Peptidase A24A domain protein; PFAM: Bacterial Peptidase A24 N-terminal domain; Type IV leader peptidase family
YP_004057157.1	InterPro IPR012902: IPR000983: IPR001120; KEGG: mrb:Mrub_1036 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004057158.1	KEGG: rsc:RCFBP_11452 transcriptional regulator, LysR family; SPTR: Putative uncharacterized protein
YP_004057159.1	InterPro IPR012902: IPR001120; KEGG: pna:Pnap_0762 general secretion pathway protein I; SPTR: General secretion pathway protein I; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004057160.1	InterPro IPR012902: IPR001120; KEGG: tth:TTC1842 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004057161.1	KEGG: tth:TTC1843 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057162.1	COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR007831: IPR001482: IPR003593; KEGG: tth:TTC1844 ATPase; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; SPTR: Putative ATPase; PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain
YP_004057163.1	COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR018076: IPR003004; KEGG: tth:TTC1845 general secretion pathway protein F; PFAM: Type II secretion system F domain; SPTR: General secretion pathway protein F; PFAM: Bacterial type II secretion system protein F domain
YP_004057164.1	KEGG: tth:TTC1846 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057165.1	KEGG: mlo:mlr9641 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057166.1	COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterPro IPR000160: IPR001633; KEGG: drm:Dred_1346 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein; SPTR: Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S); TIGRFAM: diguanylate cyclase; PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_004057167.1	InterPro IPR003675; KEGG: clo:HMPREF0868_0041 CAAX amino terminal protease family protein; PFAM: Abortive infection protein; SPTR: CAAX amino terminal protease family protein; PFAM: CAAX amino terminal protease family
YP_004057168.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509: IPR020053; KEGG: sli:Slin_5717 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family
YP_004057169.1	COGs: COG0261 Ribosomal protein L21; InterPro IPR001787: IPR018258; KEGG: mrb:Mrub_2228 50S ribosomal protein L21; PFAM: ribosomal protein L21; SPTR: 50S ribosomal protein L21; TIGRFAM: ribosomal protein L21; PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21
YP_004057170.1	COGs: COG0211 Ribosomal protein L27; InterPro IPR001684: IPR018261; KEGG: tth:TTC1423 50S ribosomal protein L27; PFAM: ribosomal protein L27; SPTR: 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27
YP_004057171.1	COGs: COG0536 GTPase; InterProIPR014100: IPR005225: IPR015349: IPR006169: IPR 002917: IPR006073: IPR006074; KEGG: ttj:TTHA1781 GTPase ObgE; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related; GTP1/OBG domain protein; SPTR: GTPase obg; TIGRFAM: GTP-binding protein Obg/CgtA; small GTP-binding protein; Obg family GTPase CgtA; PFAM: GTPase of unknown function; GTP1/OBG; Domain of unknown function (DUF1967); TIGRFAM: Obg family GTPase CgtA; Obg family GTPase CgtA, C-terminal extension; small GTP-binding protein domain
YP_004057172.1	COGs: COG1057 Nicotinic acid mononucleotide adenylyltransferase; InterPro IPR004821: IPR005248: IPR004820; KEGG: msv:Mesil_0752 nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; PRIAM: Nicotinate-nucleotide adenylyltransferase; SPTR: Nicotinate (Nicotinamide) nucleotide adenylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain
YP_004057173.1	COGs: COG1713 HD superfamily hydrolase involved in NAD metabolism; InterPro IPR005249: IPR006674: IPR003607; KEGG: msv:Mesil_0753 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: Metal dependent phosphohydrolase; PFAM: HD domain; TIGRFAM: HD superfamily hydrolase of NAD metabolism; uncharacterized domain HDIG
YP_004057174.1	COGs: COG1316 Transcriptional regulator; InterPro IPR004474; KEGG: msv:Mesil_0754 cell envelope-related transcriptional attenuator; PFAM: cell envelope-related transcriptional attenuator; SPTR: Cell envelope-related transcriptional attenuator; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; cell envelope-related function transcriptional attenuator common domain
YP_004057175.1	COGs: COG0799 Iojap protein; InterPro IPR004394; KEGG: mrb:Mrub_2225 iojap-like protein; PFAM: Iojap-related protein; SPTR: Iojap-like protein; TIGRFAM: iojap-like protein; PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein
YP_004057176.1	COGs: COG0792 endonuclease distantly related to Holliday junction resolvase; InterPro IPR003509; KEGG: ttj:TTHA0372 hypothetical protein; PFAM: Uncharacterised protein family UPF0102; SPTR: UPF0102 protein TTHA0372; PFAM: Uncharacterised protein family UPF0102
YP_004057177.1	InterPro IPR018649; KEGG: mrb:Mrub_0297 hypothetical protein; PFAM: Protein of unknown function DUF2078, membrane; SPTR: Putative uncharacterized protein; PFAM: Predicted membrane protein (DUF2078)
YP_004057178.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: msv:Mesil_0142 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; SPTR: Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_004057179.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR003660: IPR003661: IPR003594: IPR005467: IPR 004358; KEGG: ttj:TTHA1723 sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SPTR: Phosphate regulon sensor protein phoR; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_004057180.1	KEGG: tth:TTC1362 hypothetical protein; SPTR: Hypothetical conserved protein
YP_004057181.1	COGs: COG2132 Putative multicopper oxidase; InterProIPR006311: IPR011707: IPR001117: IPR011706: IPR 017909: IPR002355; KEGG: ter:Tery_0359 multicopper oxidase, type 3; PFAM: multicopper oxidase type 3; multicopper oxidase type 1; multicopper oxidase type 2; SPTR: Laccase; PFAM: Multicopper oxidase
YP_004057182.1	InterPro IPR005829; KEGG: mrb:Mrub_0292 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3105)
YP_004057183.1	COGs: COG2217 Cation transport ATPase; InterProIPR006403: IPR006416: IPR001757: IPR008250: IPR 005834: IPR001756: IPR018303; KEGG: ttj:TTHA1733 copper-transporting ATPase, P-type (CopB); PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; SPTR: Copper-transporting ATPase, P-type (CopB); TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_004057184.1	COGs: COG3439 conserved hypothetical protein; InterPro IPR005180: IPR016796; KEGG: msv:Mesil_0138 protein of unknown function DUF302; PFAM: protein of unknown function DUF302; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF302
YP_004057185.1	InterPro IPR018649; KEGG: rxy:Rxyl_3081 hypothetical protein; PFAM: Protein of unknown function DUF2078, membrane; SPTR: Putative uncharacterized protein; PFAM: Predicted membrane protein (DUF2078)
YP_004057186.1	KEGG: vpr:Vpar_0562 DNA repair ATPase-like protein; SPTR: Putative uncharacterized protein; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria)
YP_004057187.1	InterPro IPR013050: IPR005018; KEGG: ton:TON_0876 DOMON; PFAM: DOMON domain protein; SMART: DOMON domain protein; SPTR: DOMON domain protein; PFAM: DOMON domain
YP_004057188.1	COGs: COG1842 Phage shock protein A (IM30) suppresses sigma54-dependent transcription; InterPro IPR007157; KEGG: mrb:Mrub_0013 phage shock protein A, PspA; PFAM: PspA/IM30 family protein; SPTR: Phage shock protein A, PspA; PFAM: PspA/IM30 family
YP_004057189.1	COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763: IPR017970; KEGG: nml:Namu_0755 rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: Rhodanese-like protein; PFAM: Rhodanese-like domain
YP_004057190.1	KEGG: msv:Mesil_1037 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057191.1	COGs: COG2353 conserved hypothetical protein; InterPro IPR007372; KEGG: msv:Mesil_1395 YceI family protein; PFAM: YceI family protein; SPTR: YceI family protein; PFAM: YceI-like domain
YP_004057192.1	InterPro IPR011031; KEGG: hoh:Hoch_3578 cytochrome c family protein; SPTR: Cytochrome c family protein
YP_004057193.1	KEGG: cur:cur_1781 sodium/glutamate symporter; SPTR: Putative sodium/glutamate symporter
YP_004057194.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867: IPR005829; KEGG: msv:Mesil_1036 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; SPTR: Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_004057195.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR003660: IPR003661: IPR003594: IPR005467: IPR 004358; KEGG: mrb:Mrub_0643 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SPTR: Histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_004057196.1	KEGG: msv:Mesil_1034 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057197.1	InterPro IPR005075; KEGG: ttj:TTHA1731 hypothetical protein; PFAM: Propeptide PepSY amd peptidase M4; SPTR: Putative uncharacterized protein TTHA1731
YP_004057198.1	COGs: COG2217 Cation transport ATPase; InterProIPR006122: IPR006403: IPR006416: IPR001757: IPR 006121: IPR008250: IPR005834: IPR002109: IPR001756: IPR001877:I PR018303: IPR017969; KEGG: dge:Dgeo_2553 heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; glutaredoxin; SPTR: ATPase, P type cation/copper-transporter; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; copper ion binding protein; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; Glutaredoxin; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; copper ion binding protein; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_004057199.1	COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119: IPR020816; KEGG: tra:Trad_2755 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; SPTR: Histone family protein DNA-binding protein; PFAM: Bacterial DNA-binding protein
YP_004057200.1	COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR004552: IPR002123; KEGG: ttj:TTHA1348 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: 1-acyl-sn-glycerol-3-phosphate acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases
YP_004057201.1	COGs: COG1515 Deoxyinosine 3'endonuclease (endonuclease V); InterPro IPR007581; KEGG: tra:Trad_1374 deoxyribonuclease V; PFAM: Endonuclease V; PRIAM: Deoxyribonuclease V; SPTR: Deoxyribonuclease V; PFAM: Endonuclease V
YP_004057202.1	KEGG: mrb:Mrub_2964 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial phospho-glucose isomerase C-terminal region
YP_004057203.1	KEGG: app:CAP2UW1_1824 protein of unknown function DUF490; SPTR: Putative uncharacterized protein
YP_004057204.1	InterPro IPR000182; KEGG: msv:Mesil_3029 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family
YP_004057205.1	COGs: COG0406 Fructose-2 6-bisphosphatase; InterPro IPR013078; KEGG: tth:TTC1956 phosphoglycerate mutase/fructose-2,6-bisphosphatase; PFAM: Phosphoglycerate mutase; SPTR: Phosphoglycerate mutase; PFAM: Phosphoglycerate mutase family
YP_004057206.1	COGs: COG1597 Sphingosine kinase; InterPro IPR005218: IPR001206; KEGG: tth:TTC1957 protein BmrU; PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; SPTR: Protein bmrU; PFAM: Diacylglycerol kinase catalytic domain; TIGRFAM: lipid kinase, YegS/Rv2252/BmrU family
YP_004057207.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: tth:TTC0745 glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Glycosyltransferase; PFAM: Glycosyl transferases group 1
YP_004057208.1	COGs: COG3174 membrane protein; KEGG: mrb:Mrub_0808 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: MgtC family
YP_004057209.1	COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; InterPro IPR004839: IPR005861: IPR001917; KEGG: msv:Mesil_2619 histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; SPTR: Histidinol-phosphate aminotransferase; PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase
YP_004057210.1	COGs: COG0131 Imidazoleglycerol-phosphate dehydratase; InterPro IPR000807: IPR020565; KEGG: tth:TTC0061 imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase; PRIAM: Imidazoleglycerol-phosphate dehydratase; SPTR: Imidazoleglycerol-phosphate dehydratase; PFAM: Imidazoleglycerol-phosphate dehydratase
YP_004057211.1	COGs: COG0118 Glutamine amidotransferase; InterPro IPR010139: IPR000991: IPR016226: IPR017926; KEGG: msv:Mesil_2616 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; SPTR: Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
YP_004057212.1	COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR011611: IPR002139: IPR002173; KEGG: tth:TTC0063 sugar kinase; PFAM: PfkB domain protein; SPTR: PfkB domain protein; PFAM: pfkB family carbohydrate kinase
YP_004057213.1	COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterProIPR010051: IPR006311: IPR006963: IPR006656: IPR 006657: IPR017909: IPR006655; KEGG: sul:SYO3AOP1_0438 nitrate reductase catalytic subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; SPTR: Periplasmic nitrate reductase, large subunit; TIGRFAM: periplasmic nitrate reductase, large subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: periplasmic nitrate reductase, large subunit; Tat (twin-arginine translocation) pathway signal sequence
YP_004057214.1	InterPro IPR004494: IPR017896: IPR017900; KEGG: nis:NIS_1807 quinol dehydrogenase periplasmic component; SPTR: Quinol dehydrogenase periplasmic component; TIGRFAM: MauM/NapG family ferredoxin-type protein; TIGRFAM: MauM/NapG family ferredoxin-type protein
YP_004057215.1	COGs: COG0348 Polyferredoxin; InterPro IPR011886: IPR017896: IPR017900; KEGG: pmx:PERMA_0300 quinol dehydrogenase membrane component; SPTR: Ferredoxin-type protein, NapH/MauN family; TIGRFAM: ferredoxin-type protein, NapH/MauN family; TIGRFAM: ferredoxin-type protein, NapH/MauN family
YP_004057216.1	COGs: COG3043 Nitrate reductase cytochrome c-type subunit; InterPro IPR005591; KEGG: nis:NIS_1805 periplasmic nitrate reductase, small subunit; PFAM: Nitrate reductase cytochrome c-type subunit (NapB); SPTR: Periplasmic nitrate reductase small subunit (Cytochrome C-type protein); PFAM: Nitrate reductase cytochrome c-type subunit (NapB)
YP_004057217.1	InterPro IPR017896: IPR017900; KEGG: nis:NIS_1804 periplasmic nitrate reductase, ferredoxin-type protein NapF; SPTR: 4Fe-4S ferredoxin, iron-sulfur binding protein; PFAM: 4Fe-4S binding domain; TIGRFAM: ferredoxin-type protein NapF
YP_004057218.1	KEGG: sul:SYO3AOP1_0443 WD-40 repeat protein; SPTR: Putative periplasmic protein
YP_004057219.1	COGs: COG3062 Uncharacterized protein involved in formation of periplasmic nitrate reductase; InterPro IPR005623; KEGG: nis:NIS_1802 periplasmic nitrate reductase component NapD; PFAM: NapD family protein; SPTR: Periplasmic nitrate reductase NapD; PFAM: NapD protein
YP_004057220.1	COGs: COG0288 Carbonic anhydrase; InterPro IPR001765: IPR015892; KEGG: sno:Snov_1360 carbonic anhydrase; PFAM: carbonic anhydrase; SPTR: Putative carbonic anhydrase; PFAM: Carbonic anhydrase
YP_004057221.1	InterPro IPR018062; KEGG: msv:Mesil_1432 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057222.1	COGs: COG0714 MoxR-like ATPase; InterPro IPR011703: IPR016366: IPR003593; KEGG: msv:Mesil_1431 ATPase associated with various cellular activities AAA_3; PFAM: ATPase associated with various cellular activities AAA_3; SMART: AAA ATPase; SPTR: ATPase associated with various cellular activities AAA_3; PFAM: ATPase family associated with various cellular activities (AAA)
YP_004057223.1	COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: msv:Mesil_1430 protein of unknown function DUF58; PFAM: protein of unknown function DUF58; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF58
YP_004057224.1	COGs: COG2041 Sulfite oxidase; InterPro IPR000572; KEGG: sti:Sthe_2181 oxidoreductase molybdopterin binding protein; PFAM: oxidoreductase molybdopterin binding; SPTR: Oxidoreductase molybdopterin binding protein; PFAM: Mo-co oxidoreductase dimerisation domain; Oxidoreductase molybdopterin binding domain
YP_004057225.1	InterPro IPR003731; KEGG: ttj:TTHA1788 hypothetical protein; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; SPTR: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; PFAM: Dinitrogenase iron-molybdenum cofactor
YP_004057226.1	InterPro IPR000086: IPR020476: IPR020084; KEGG: msv:Mesil_0927 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: NUDIX hydrolase; PFAM: NUDIX domain
YP_004057227.1	COGs: COG3342 conserved hypothetical protein; InterPro IPR010430: IPR014927; KEGG: msv:Mesil_0928 protein of unknown function DUF1028; PFAM: protein of unknown function DUF1028; Putative peptidoglycan binding; SPTR: Putative uncharacterized protein; PFAM: Putative peptidoglycan binding domain; Family of unknown function (DUF1028)
YP_004057228.1	KEGG: gur:Gura_3349 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057229.1	KEGG: gur:Gura_3349 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057230.1	COGs: COG1047 FKBP-type peptidyl-prolyl cis-trans isomerase 2; InterPro IPR001179; KEGG: msv:Mesil_1088 peptidylprolyl isomerase FKBP-type; PFAM: peptidylprolyl isomerase FKBP-type; PRIAM: Peptidylprolyl isomerase; SPTR: Peptidylprolyl isomerase FKBP-type; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase
YP_004057231.1	COGs: COG0031 Cysteine synthase; InterProIPR005856: IPR005859: IPR001926: IPR000634: IPR 001216; KEGG: msv:Mesil_1087 cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Cysteine synthase; TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases
YP_004057232.1	COGs: COG2383 conserved hypothetical protein; InterPro IPR007014; KEGG: msv:Mesil_1081 FUN14 family protein; PFAM: FUN14 family protein; SPTR: FUN14 family protein; PFAM: FUN14 family
YP_004057233.1	COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006091: IPR006090: IPR006089; KEGG: ttj:TTHB116 acyl-CoA dehydrogenase, short-chain specific ( AidB protein); PFAM: acyl-CoA dehydrogenase domain-containing protein; SPTR: Acyl-CoA dehydrogenase, short-chain specific (Probable AidB protein); PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain
YP_004057234.1	COGs: COG2182 Maltose-binding periplasmic protein/domains; InterPro IPR006059: IPR006060; KEGG: tth:TTC1288 maltose/maltodextrin-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: Maltose/maltodextrin-binding protein; PFAM: Bacterial extracellular solute-binding protein
YP_004057235.1	COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: ttj:TTHA1651 maltose ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Maltose ABC transporter permease malF; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004057236.1	COGs: COG3833 ABC-type maltose transport systems permease component; InterPro IPR000515; KEGG: ttj:TTHA1650 maltose ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Maltose ABC transporter permease malG; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004057237.1	COGs: COG0366 Glycosidase; InterPro IPR006047: IPR006589; KEGG: mrb:Mrub_1114 alpha amylase catalytic subunit; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Alpha amylase catalytic region; PFAM: Alpha amylase, catalytic domain
YP_004057238.1	COGs: COG0366 Glycosidase; InterPro IPR006047: IPR006589; KEGG: mrb:Mrub_2907 alpha amylase catalytic subunit; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Alpha amylase catalytic region; PFAM: Alpha amylase, catalytic domain
YP_004057239.1	COGs: COG2855 membrane protein; InterPro IPR004630: IPR018383; KEGG: nis:NIS_0168 hypothetical protein; PFAM: Uncharacterised protein family UPF0324; SPTR: Putative uncharacterized protein; PFAM: Conserved hypothetical protein 698; TIGRFAM: conserved hypothetical integral membrane protein
YP_004057240.1	COGs: COG0042 tRNA-dihydrouridine synthase; InterPro IPR018517: IPR001269; KEGG: tra:Trad_2285 dihydrouridine synthase DuS; PFAM: dihydrouridine synthase DuS; SPTR: Dihydrouridine synthase DuS; manually curated; PFAM: Dihydrouridine synthase (Dus); TIGRFAM: TIM-barrel protein, nifR3 family
YP_004057241.1	COGs: COG1986 conserved hypothetical protein; InterPro IPR002786; KEGG: aac:Aaci_1629 protein of unknown function DUF84; PFAM: protein of unknown function DUF84; SPTR: Putative uncharacterized protein FLAS10H9.8; PFAM: Protein of unknown function DUF84; TIGRFAM: inosine/xanthosine triphosphatase
YP_004057242.1	InterPro IPR002763; KEGG: ttj:TTHA1639 hypothetical protein; PFAM: protein of unknown function DUF72; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF72
YP_004057243.1	InterPro IPR003140; KEGG: ttj:TTHA1638 hypothetical protein; PFAM: phospholipase/Carboxylesterase; SPTR: Phospholipase/Carboxylesterase; PFAM: Phospholipase/Carboxylesterase
YP_004057244.1	COGs: COG0462 Phosphoribosylpyrophosphate synthetase; InterPro IPR005946: IPR000836; KEGG: msv:Mesil_2735 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; PRIAM: Ribose-phosphate diphosphokinase; SPTR: Ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase
YP_004057245.1	COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterProIPR000014: IPR000160: IPR001610: IPR003018: IPR 001633: IPR000700: IPR013655; KEGG: ddr:Deide_1p00099 diguanylate-cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-3 domain protein; GAF domain protein; SMART: EAL domain protein; GGDEF domain containing protein; GAF domain protein; PAC repeat-containing protein; PAS domain containing protein; SPTR: Putative diguanylate-cyclase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain; GAF domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain
YP_004057246.1	COGs: COG0466 ATP-dependent Lon protease; InterProIPR004815: IPR001984: IPR003111: IPR003593: IPR 003959; KEGG: tth:TTC0746 ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; PRIAM: Endopeptidase La; SMART: peptidase S16 lon domain protein; AAA ATPase; SPTR: ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La
YP_004057247.1	KEGG: ttj:TTHA0994 hypothetical protein; SPTR: Putative uncharacterized protein TTHA0994
YP_004057248.1	COGs: COG0050 GTPase - translation elongation factors; InterProIPR000795: IPR004541: IPR005225: IPR004161: IPR 004160; KEGG: msv:Mesil_2909 translation elongation factor Tu; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain-containing protein; SPTR: Translation elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: Elongation factor Tu C-terminal domain; Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU
YP_004057249.1	InterPro IPR018264: IPR001705; KEGG: msv:Mesil_2689 ribosomal protein L33; PFAM: ribosomal protein L33; SPTR: Ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type
YP_004057250.1	InterPro IPR001901: IPR005807; KEGG: msv:Mesil_2688 preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; SPTR: Preprotein translocase, SecE subunit; TIGRFAM: preprotein translocase, SecE subunit; PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial
YP_004057251.1	COGs: COG0250 Transcription antiterminator; InterPro IPR015869: IPR001062: IPR006645: IPR005824; KEGG: mrb:Mrub_1181 NusG antitermination factor; PFAM: NGN domain-containing protein; KOW domain protein; SMART: NGN domain-containing protein; KOW domain protein; SPTR: Transcription antitermination protein nusG; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG
YP_004057252.1	COGs: COG0080 Ribosomal protein L11; InterProIPR020785: IPR006519: IPR000911: IPR020784: IPR 020783; KEGG: ttj:TTHA0247 50S ribosomal protein L11; PFAM: Ribosomal protein L11-like; SMART: ribosomal protein L11; SPTR: 50S ribosomal protein L11; TIGRFAM: ribosomal protein L11; PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11
YP_004057253.1	COGs: COG0081 Ribosomal protein L1; InterPro IPR002143: IPR005878; KEGG: ttj:TTHA0246 50S ribosomal protein L1; PFAM: ribosomal protein L1; SPTR: 50S ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast
YP_004057254.1	COGs: COG0244 Ribosomal protein L10; InterPro IPR001790; KEGG: ttj:TTHA0209 50S ribosomal protein L10; PFAM: ribosomal protein L10; SPTR: 50S ribosomal protein L10; PFAM: Ribosomal protein L10
YP_004057255.1	COGs: COG0222 Ribosomal protein L7/L12; InterPro IPR000206: IPR013823; KEGG: msv:Mesil_2675 ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12; SPTR: Ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12
YP_004057256.1	COGs: COG0085 DNA-directed RNA polymerase beta subunit/140 kD subunit; InterProIPR007121: IPR010243: IPR007644: IPR007645: IPR 019462: IPR007120: IPR007641; KEGG: msv:Mesil_0821 DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 3; RNA polymerase beta subunit; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2 domain 7; SPTR: DNA-directed RNA polymerase, beta subunit; TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit
YP_004057257.1	COGs: COG0086 DNA-directed RNA polymerase beta' subunit/160 kD subunit; InterProIPR012754: IPR006592: IPR007080: IPR000722: IPR 007066: IPR007083: IPR007081; KEGG: msv:Mesil_0822 DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; RNA polymerase Rpb1 domain 5; SMART: RNA polymerase I subunit A domain protein; SPTR: DNA-directed RNA polymerase, beta' subunit; TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 5; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form
YP_004057258.1	KEGG: mrb:Mrub_1530 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057259.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR002410: IPR000073; KEGG: msv:Mesil_0825 alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold
YP_004057260.1	COGs: COG0785 Cytochrome c biogenesis protein; InterPro IPR021184: IPR003834; KEGG: ttj:TTHA1409 cytochrome c-type biogenesis protein CcdA; PFAM: cytochrome c biogenesis protein transmembrane region; SPTR: Cytochrome C-type biogenesis protein ccdA; PFAM: Cytochrome C biogenesis protein transmembrane region
YP_004057261.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR017871: IPR003593: IPR003439; KEGG: tth:TTC1043 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter ATP-binding protein; PFAM: ABC transporter
YP_004057262.1	COGs: COG2386 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR003544; KEGG: msv:Mesil_0935 cytochrome c-type biogenesis protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; SPTR: Cytochrome c-type biogenesis protein CcmB; PFAM: CcmB protein; TIGRFAM: heme exporter protein CcmB
YP_004057263.1	KEGG: lbf:LBF_0136 lipoprotein; SPTR: Putative uncharacterized protein
YP_004057264.1	InterPro IPR019734: IPR013026: IPR001440; KEGG: amr:AM1_G0032 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Tetratricopeptide repeat domain protein; PFAM: Tetratricopeptide repeat
YP_004057265.1	InterPro IPR011031; KEGG: ccv:CCV52592_1807 hypothetical protein; SPTR: Cytochrome c family protein
YP_004057266.1	COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR003557: IPR002541; KEGG: ttj:TTHA1406 cytochrome c-type biogenesis protein, heme exporter protein; PFAM: cytochrome c assembly protein; SPTR: Cytochrome c assembly protein; PFAM: Cytochrome C assembly protein
YP_004057267.1	KEGG: tth:TTC1040 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057268.1	COGs: COG2332 Cytochrome c-type biogenesis protein CcmE; InterPro IPR004329; KEGG: tth:TTC1039 cytochrome c-type biogenesis protein CcmE; PFAM: CcmE/CycJ protein; SPTR: Cytochrome c-type biogenesis protein CcmE; PFAM: CcmE
YP_004057269.1	COGs: COG1138 Cytochrome c biogenesis factor; InterPro IPR003567: IPR003568: IPR002541; KEGG: mrb:Mrub_0840 cytochrome c assembly protein; PFAM: cytochrome c assembly protein; SPTR: Cytochrome c assembly protein; PFAM: Cytochrome C assembly protein; TIGRFAM: c-type cytochrome biogenesis protein CcmF
YP_004057270.1	InterPro IPR017936: IPR000866; KEGG: ttj:TTHA1403 cytochrome c biogenesis protein, thiol:disulfide interchange protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Cytochrome c biogenesis protein, thiol:disulfide interchange protein; PFAM: AhpC/TSA family; TIGRFAM: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily
YP_004057271.1	COGs: COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes; InterPro IPR005616; KEGG: msv:Mesil_0941 cytochrome c biogenesis protein; PFAM: cytochrome C biogenesis protein; SPTR: Cytochrome C biogenesis protein; PFAM: Cytochrome C biogenesis protein
YP_004057272.1	COGs: COG4235 Cytochrome c biogenesis factor; InterProIPR019734: IPR013026: IPR009056: IPR001440: IPR 003088; KEGG: msv:Mesil_0942 cytochrome c class I; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; cytochrome c class I; SMART: Tetratricopeptide repeat; SPTR: Cytochrome c class I; PFAM: Cytochrome c
YP_004057273.1	COGs: COG0723 Rieske Fe-S protein; InterPro IPR017941; KEGG: msv:Mesil_0943 Rieske (2Fe-2S) iron-sulfur domain protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: Rieske (2Fe-2S) iron-sulfur domain protein; PFAM: Rieske [2Fe-2S] domain
YP_004057274.1	KEGG: psb:Psyr_1632 ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2; SPTR: Apolipoprotein N-acyltransferase/copper homeostasis protein CutE
YP_004057275.1	COGs: COG0162 Tyrosyl-tRNA synthetase; InterPro IPR002307: IPR002942: IPR002305; KEGG: ttj:TTHA1399 tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; SPTR: Tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase
YP_004057276.1	KEGG: msv:Mesil_0946 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057277.1	InterPro IPR002583; KEGG: mrb:Mrub_0847 30S ribosomal protein S20; PFAM: ribosomal protein S20; SPTR: 30S ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20
YP_004057278.1	COGs: COG0850 Septum formation inhibitor; InterPro IPR013033: IPR005526; KEGG: msv:Mesil_2606 septum formation inhibitor MinC; PFAM: Septum formation inhibitor MinC; SPTR: Septum formation inhibitor MinC; PFAM: Septum formation inhibitor MinC, C-terminal domain; TIGRFAM: septum site-determining protein MinC
YP_004057279.1	COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR017790: IPR005311: IPR001460; KEGG: ttj:TTHA1191 penicillin-binding protein 2/cell division protein FtsI; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Penicillin-binding protein 2; TIGRFAM: penicillin-binding protein 2; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2
YP_004057280.1	InterPro IPR007227; KEGG: msv:Mesil_2604 rod shape-determining protein MreD; SPTR: Rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD; PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD
YP_004057281.1	COGs: COG1792 Cell shape-determining protein; InterPro IPR007221; KEGG: msv:Mesil_2603 rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; SPTR: Rod shape-determining protein MreC; PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC
YP_004057282.1	COGs: COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; InterPro IPR003697; KEGG: msv:Mesil_2602 maf protein; PFAM: Maf family protein; SPTR: Maf protein; TIGRFAM: maf protein; PFAM: Maf-like protein; TIGRFAM: MAF protein
YP_004057283.1	COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; InterPro IPR001736; KEGG: tth:TTC0824 phosphoslipase; SMART: phospholipase D/Transphosphatidylase; SPTR: Putative phosphoslipase
YP_004057284.1	COGs: COG0274 Deoxyribose-phosphate aldolase; InterPro IPR011343: IPR002915; KEGG: msv:Mesil_2600 deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; PRIAM: Deoxyribose-phosphate aldolase; SPTR: Deoxyribose-phosphate aldolase; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: DeoC/LacD family aldolase; TIGRFAM: deoxyribose-phosphate aldolase
YP_004057285.1	COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: msv:Mesil_1410 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; SPTR: N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase
YP_004057286.1	COGs: COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A); InterPro IPR000440; KEGG: bbe:BBR47_54450 NADH dehydrogenase subunit A; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; SPTR: NADH-quinone oxidoreductase subunit; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
YP_004057287.1	COGs: COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductase; InterPro IPR006138: IPR006137; KEGG: bts:Btus_2879 NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH-quinone oxidoreductase, B subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit
YP_004057288.1	COGs: COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit; InterPro IPR020396: IPR001268; KEGG: bts:Btus_2880 NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; SPTR: NADH dehydrogenase subunit C /NADH dehydrogenase subunit D; PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit
YP_004057289.1	COGs: COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7; InterPro IPR001135; KEGG: aba:Acid345_1289 NADH dehydrogenase I, D subunit; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH-quinone oxidoreductase subunit D 1; PFAM: Respiratory-chain NADH dehydrogenase, 49 Kd subunit
YP_004057290.1	COGs: COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H); InterPro IPR018086: IPR019775: IPR001694; KEGG: apb:SAR116_0148 respiratory-chain NADH dehydrogenase, subunit 1; PFAM: respiratory-chain NADH dehydrogenase subunit 1; SPTR: Respiratory-chain NADH dehydrogenase, subunit 1; PFAM: NADH dehydrogenase
YP_004057291.1	COGs: COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); InterPro IPR017900: IPR017896; KEGG: sth:STH2772 NADH dehydrogenase I subunit I; SPTR: NADH-quinone oxidoreductase subunit I 2
YP_004057292.1	InterPro IPR001457; KEGG: dae:Dtox_1211 NADH-ubiquinone/plastoquinone oxidoreductase chain 6; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; SPTR: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6
YP_004057293.1	COGs: COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K); InterPro IPR001133; KEGG: mta:Moth_0984 NADH-ubiquinone oxidoreductase, chain 4L; PFAM: NADH-ubiquinone oxidoreductase chain 4L; SPTR: NADH-ubiquinone oxidoreductase chain 4L; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
YP_004057294.1	COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit; InterProIPR003945: IPR003916: IPR018393: IPR001516: IPR 001750; KEGG: mta:Moth_0985 proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; SPTR: Proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L
YP_004057295.1	COGs: COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); InterPro IPR010227: IPR003918: IPR001750; KEGG: rmr:Rmar_1248 proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: NADH-quinone oxidoreductase chain M (NADH dehydrogenase I, chain M) (NDH-1, chain M); TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M
YP_004057296.1	COGs: COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N); InterPro IPR001750; KEGG: xfn:XfasM23_0253 NADH dehydrogenase subunit N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: NADH-ubiquinone oxidoreductase NQO14 subunit; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N
YP_004057297.1	KEGG: msv:Mesil_1409 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057298.1	KEGG: mrb:Mrub_2208 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057299.1	COGs: COG0037 ATPase of the PP-loop superfamily protein implicated in cell cycle control; InterPro IPR000541: IPR012089: IPR011063; KEGG: ttj:TTHA0477 ATP pyrophosphatase; PFAM: PP-loop domain protein; SPTR: PP-loop domain protein; PFAM: PP-loop family; TIGRFAM: conserved hypothetical protein TIGR00269
YP_004057300.1	InterPro IPR010035: IPR003749; KEGG: ttj:TTHA0476 hypothetical protein; PFAM: thiamineS protein; SPTR: Putative uncharacterized protein; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: ThiS family; TIGRFAM: thiamine biosynthesis protein ThiS
YP_004057301.1	COGs: COG1001 Adenine deaminase; InterPro IPR006679: IPR006680; KEGG: msv:Mesil_0967 adenine deaminase; PFAM: amidohydrolase; PRIAM: Adenine deaminase; SPTR: Adenine deaminase; TIGRFAM: adenine deaminase; PFAM: Amidohydrolase family; TIGRFAM: adenine deaminase
YP_004057302.1	KEGG: msv:Mesil_2577 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057303.1	COGs: COG2255 Holliday junction resolvasome helicase subunit; InterProIPR004605: IPR003593: IPR008823: IPR008824: IPR 003959; KEGG: mrb:Mrub_0881 Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; SMART: AAA ATPase; SPTR: Holliday junction ATP-dependent DNA helicase ruvB; TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit
YP_004057304.1	InterPro IPR000601; KEGG: aeh:Mlg_2372 hypothetical protein; PFAM: PKD domain containing protein; SMART: PKD domain containing protein; SPTR: Putative uncharacterized protein; PFAM: PKD domain
YP_004057305.1	KEGG: ttj:TTHA0805 hypothetical protein; SPTR: Putative uncharacterized protein TTHA0805
YP_004057306.1	COGs: COG1055 Na+/H+ antiporter NhaD and related arsenite permease; InterPro IPR004680; KEGG: cte:CT1965 hypothetical protein; PFAM: Citrate transporter; SPTR: Membrane protein, putative; PFAM: Citrate transporter
YP_004057307.1	COGs: COG1418 HD superfamily hydrolase; InterPro IPR003607: IPR006674; KEGG: msv:Mesil_2575 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: Metal dependent phosphohydrolase; PFAM: HD domain
YP_004057308.1	COGs: COG0413 Ketopantoate hydroxymethyltransferase; InterPro IPR003700; KEGG: tth:TTC0039 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; PRIAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; SPTR: 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase
YP_004057309.1	COGs: COG1893 Ketopantoate reductase; InterPro IPR003710: IPR013332: IPR013752; KEGG: tmz:Tmz1t_2874 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein; PRIAM: 2-dehydropantoate 2-reductase; SPTR: 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase PanE/ApbA; Ketopantoate reductase PanE/ApbA C terminal; TIGRFAM: 2-dehydropantoate 2-reductase
YP_004057310.1	InterPro IPR000064; KEGG: xcv:XCV3979 hypothetical protein; PFAM: NLP/P60 protein; SPTR: Putative uncharacterized protein; PFAM: NlpC/P60 family
YP_004057311.1	COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006224: IPR006225: IPR002942: IPR006145; KEGG: msv:Mesil_2574 pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: Pseudouridine synthase; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family
YP_004057312.1	COGs: COG2133 Glucose/sorbosone dehydrogenase; KEGG: msv:Mesil_2489 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Glucose / Sorbosone dehydrogenase
YP_004057313.1	KEGG: lxx:Lxx04080 DNA polymerase III subunit delta'; SPTR: NA polymerase III subunit delta
YP_004057314.1	COGs: COG1189 rRNA methylase; InterPro IPR004538: IPR002942: IPR013216; KEGG: ttj:TTHA0546 hemolysin; PFAM: RNA-binding S4 domain protein; Methyltransferase type 11; SMART: RNA-binding S4 domain protein; SPTR: Hemolysin; TIGRFAM: hemolysin A; PFAM: S4 domain; FtsJ-like methyltransferase; TIGRFAM: hemolysin TlyA family protein
YP_004057315.1	KEGG: msv:Mesil_3427 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057316.1	COGs: COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase synthetase domain; InterProIPR010074: IPR010075: IPR017926: IPR000728: IPR 010918: IPR011698; KEGG: chl:Chy400_3627 phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; CobB/CobQ domain protein glutamine amidotransferase; PRIAM: Phosphoribosylformylglycinamidine synthase; SPTR: Phosphoribosylformylglycinamidine synthase II; TIGRFAM: phosphoribosylformylglycinamidine synthase II; phosphoribosylformylglycinamidine synthase I; PFAM: DJ-1/PfpI family; AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase, single chain form; phosphoribosylformylglycinamidine synthase I; phosphoribosylformylglycinamidine synthase II
YP_004057317.1	COGs: COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; InterPro IPR018236: IPR001636; KEGG: tde:TDE0686 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; PRIAM: Phosphoribosylaminoimidazolesuccinocarboxamide synthase; SPTR: Phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase
YP_004057318.1	COGs: COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase; InterPro IPR000031; KEGG: dth:DICTH_0001 phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; SPTR: Phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein
YP_004057319.1	COGs: COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase; InterProIPR018062: IPR005854: IPR017932: IPR000583: IPR 000836; KEGG: rrs:RoseRS_3743 amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; SPTR: Amidophosphoribosyltransferase; TIGRFAM: amidophosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; Glutamine amidotransferases class-II; TIGRFAM: amidophosphoribosyltransferase
YP_004057320.1	COGs: COG0151 Phosphoribosylamine-glycine ligase; InterProIPR020559: IPR000115: IPR011761: IPR020562: IPR 020561: IPR020560; KEGG: mta:Moth_2043 phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; PRIAM: Phosphoribosylamine--glycine ligase; SPTR: Phosphoribosylamine--glycine ligase; TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase
YP_004057321.1	COGs: COG0150 Phosphoribosylaminoimidazole (AIR) synthetase; InterPro IPR004733: IPR000728: IPR010918; KEGG: msv:Mesil_2786 phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; PRIAM: Phosphoribosylformylglycinamidine cyclo-ligase; SPTR: Phosphoribosylformylglycinamidine cyclo-ligase; TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase
YP_004057322.1	COGs: COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN; InterPro IPR004607: IPR002376; KEGG: tde:TDE1897 phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; SPTR: Phosphoribosylglycinamide formyltransferase; TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent
YP_004057323.1	KEGG: dvu:DVU2067 GGDEF domain-containing protein; SPTR: Putative uncharacterized protein
YP_004057324.1	COGs: COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A); InterPro IPR000440; KEGG: msv:Mesil_1283 NADH-ubiquinone/plastoquinone oxidoreductase chain 3; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; SPTR: NADH-quinone oxidoreductase subunit; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
YP_004057325.1	COGs: COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductase; InterPro IPR006138: IPR006137; KEGG: ttj:TTHA0085 NADH dehydrogenase subunit B; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH-quinone oxidoreductase subunit B; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit
YP_004057326.1	COGs: COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit; InterPro IPR020396: IPR001268; KEGG: msv:Mesil_1281 NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; SPTR: NADH (Or F420H2) dehydrogenase, subunit C; PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit
YP_004057327.1	COGs: COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7; InterPro IPR010219: IPR001135; KEGG: tth:TTC1917 NADH-quinone oxidoreductase chain D; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH dehydrogenase I, D subunit; TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: Respiratory-chain NADH dehydrogenase, 49 Kd subunit; TIGRFAM: NADH dehydrogenase I, D subunit
YP_004057328.1	COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR002023; KEGG: msv:Mesil_1279 NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; SPTR: NADH-quinone oxidoreductase, E subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit
YP_004057329.1	COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterProIPR001949: IPR011537: IPR011538: IPR019554: IPR 019575; KEGG: msv:Mesil_1278 NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH-quinone oxidoreductase, F subunit; TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: NADH-quinone oxidoreductase, F subunit
YP_004057330.1	COGs: COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); InterProIPR000283: IPR010228: IPR001041: IPR019574: IPR 006656: IPR006657; KEGG: msv:Mesil_1277 NADH-quinone oxidoreductase, chain G; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; SPTR: NADH-quinone oxidoreductase, chain G; TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; TIGRFAM: NADH-quinone oxidoreductase, chain G
YP_004057331.1	COGs: COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H); InterPro IPR018086: IPR001694; KEGG: tth:TTC1913 NADH-quinone oxidoreductase chain H; PFAM: respiratory-chain NADH dehydrogenase subunit 1; SPTR: NADH-quinone oxidoreductase subunit H; PFAM: NADH dehydrogenase
YP_004057332.1	COGs: COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); InterPro IPR017900: IPR010226: IPR017896; KEGG: ttj:TTHA0092 NADH-quinone oxidoreductase chain 9; SPTR: NADH-quinone oxidoreductase subunit I; TIGRFAM: NADH-quinone oxidoreductase, chain I; PFAM: 4Fe-4S binding domain; TIGRFAM: NADH-quinone oxidoreductase, chain I
YP_004057333.1	COGs: COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J); InterPro IPR001457; KEGG: msv:Mesil_1274 NADH-ubiquinone/plastoquinone oxidoreductase chain 6; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; SPTR: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6
YP_004057334.1	COGs: COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K); InterPro IPR001133; KEGG: ttj:TTHA0094 NADH-quinone oxidoreductase chain 11; PFAM: NADH-ubiquinone oxidoreductase chain 4L; SPTR: NADH-quinone oxidoreductase subunit K; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
YP_004057335.1	COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit; InterProIPR003945: IPR003916: IPR018393: IPR001516: IPR 001750; KEGG: tth:TTC1909 NADH-quinone oxidoreductase chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; SPTR: NADH-quinone oxidoreductase chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L
YP_004057336.1	COGs: COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); InterPro IPR010227: IPR003918: IPR001750; KEGG: msv:Mesil_1271 proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: Proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M
YP_004057337.1	COGs: COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N); InterPro IPR010096: IPR001750; KEGG: msv:Mesil_1270 proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: Proton-translocating NADH-quinone oxidoreductase, chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N
YP_004057338.1	COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006089: IPR006092: IPR006091: IPR006090; KEGG: mrb:Mrub_0830 acyl-CoA dehydrogenase domain-containing protein; PFAM: acyl-CoA dehydrogenase domain-containing protein; SPTR: Acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_004057339.1	COGs: COG2358 TRAP-type uncharacterized transport system periplasmic component; InterPro IPR011852; KEGG: tra:Trad_0054 TRAP transporter solute receptor, TAXI family; SPTR: Immunogenic protein; TIGRFAM: TRAP transporter solute receptor, TAXI family; PFAM: NMT1/THI5 like; TIGRFAM: TRAP transporter solute receptor, TAXI family
YP_004057340.1	InterPro IPR015001; KEGG: tra:Trad_0053 domain of unknown function DUF1850; PFAM: Domain of unknown function DUF1850; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1850)
YP_004057341.1	COGs: COG4666 TRAP-type uncharacterized transport system fused permease components; InterPro IPR011853: IPR010656; KEGG: tra:Trad_0052 TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: TRAP transporter, 4TM/12TM fusion protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein
YP_004057342.1	InterPro IPR001506: IPR006026; KEGG: nve:NEMVE_v1g172519 hypothetical protein; PFAM: peptidase M12A astacin; SMART: peptidase metallopeptidase; SPTR: Zinc metalloproteinase nas-13; PFAM: Astacin (Peptidase family M12A)
YP_004057343.1	InterPro IPR011701; KEGG: msv:Mesil_2519 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Bacterial protein of unknown function (DUF894)
YP_004057344.1	COGs: COG1878 metal-dependent hydrolase; InterPro IPR007325; KEGG: mrb:Mrub_2548 cyclase family protein; PFAM: cyclase family protein; SPTR: Cyclase family protein; PFAM: Putative cyclase
YP_004057345.1	COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase; InterPro IPR003331; KEGG: ttj:TTHA1314 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; PRIAM: UDP-N-acetylglucosamine 2-epimerase; SPTR: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase
YP_004057346.1	COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; InterPro IPR018481; KEGG: ttj:TTHA1313 hypothetical protein; PFAM: Glycosyl transferase, family 4, conserved region; SPTR: Putative uncharacterized protein TTHA1313; PFAM: Glycosyl transferase family 4
YP_004057347.1	COGs: COG0035 Uracil phosphoribosyltransferase; InterPro IPR005765: IPR000836; KEGG: ttj:TTHA1312 uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; PRIAM: Uracil phosphoribosyltransferase; SPTR: Uracil phosphoribosyltransferase; TIGRFAM: uracil phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase
YP_004057348.1	InterPro IPR002575; KEGG: msv:Mesil_2514 aminoglycoside phosphotransferase; PFAM: aminoglycoside phosphotransferase; SPTR: Aminoglycoside phosphotransferase; PFAM: Phosphotransferase enzyme family
YP_004057349.1	COGs: COG1032 Fe-S oxidoreductase; InterPro IPR006638: IPR007197; KEGG: ttj:TTHA1310 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Probable Fe/S oxidoreductase; PFAM: Radical SAM superfamily
YP_004057350.1	KEGG: rca:Rcas_3792 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057351.1	COGs: COG0571 dsRNA-specific ribonuclease; InterPro IPR001159; KEGG: tra:Trad_2670 double-stranded RNA binding domain protein; PFAM: double-stranded RNA binding domain protein; SMART: double-stranded RNA binding domain protein; SPTR: Double-stranded RNA binding domain protein; PFAM: Double-stranded RNA binding motif
YP_004057352.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792: IPR001789; KEGG: ttj:TTHA1352 response regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: Transcriptional regulatory protein; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_004057353.1	COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR001261: IPR002933: IPR011650; KEGG: mrb:Mrub_0805 peptidase M20; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: Peptidase M20; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain
YP_004057354.1	KEGG: bge:BC1002_4059 aldehyde dehydrogenase; SPTR: Putative uncharacterized protein
YP_004057355.1	KEGG: ttj:TTHA1350 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057356.1	COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterProIPR017871: IPR003593: IPR003439: IPR017940: IPR 001140; KEGG: ttj:TTHA1342 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: ABC transporter, ATP-binding protein; PFAM: ABC transporter; ABC transporter transmembrane region
YP_004057357.1	COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593: IPR003439: IPR017940: IPR001140; KEGG: mrb:Mrub_0801 ABC transporter-like protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: ABC transporter; PFAM: ABC transporter; ABC transporter transmembrane region
YP_004057358.1	COGs: COG2832 conserved hypothetical protein; InterPro IPR007401; KEGG: mgm:Mmc1_1925 hypothetical protein; PFAM: protein of unknown function DUF454; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF454)
YP_004057359.1	COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway); InterPro IPR002529; KEGG: msv:Mesil_1529 5-carboxymethyl-2-hydroxymuconateDelta-isomerase; PFAM: fumarylacetoacetate (FAA) hydrolase; SPTR:5-carboxymethyl-2-hydroxymuconateDelta-isomera se; PFAM: Domain of unknown function (DUF2437); Fumarylacetoacetate (FAA) hydrolase family
YP_004057360.1	COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR017871: IPR003593: IPR003439; KEGG: msv:Mesil_1528 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter; PFAM: ABC transporter
YP_004057361.1	COGs: COG0344 membrane protein; InterPro IPR003811; KEGG: mrb:Mrub_0777 hypothetical protein; PFAM: protein of unknown function DUF205; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF205); TIGRFAM: acyl-phosphate glycerol 3-phosphate acyltransferase
YP_004057362.1	COGs: COG1609 Transcriptional regulators; InterPro IPR000843: IPR001761; KEGG: tth:TTC0455 transcriptional repressor; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; SPTR: Transcriptional repressor; PFAM: Bacterial regulatory proteins, lacI family; family
YP_004057363.1	COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: mrb:Mrub_2978 beta-lactamase domain-containing protein; SPTR: Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily
YP_004057364.1	COGs: COG0560 Phosphoserine phosphatase; InterPro IPR005834; KEGG: mrb:Mrub_0125 HAD-superfamily subfamily IB hydrolase TIGR01490; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: HAD-superfamily subfamily IB hydrolase, TIGR01490; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like
YP_004057365.1	InterPro IPR004692; KEGG: msv:Mesil_1365 preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; SPTR: Preprotein translocase, SecG subunit; TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit
YP_004057366.1	COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: mrb:Mrub_1143 extracellular solute-binding protein family 5; PFAM: extracellular solute-binding protein family 5; SPTR: Extracellular solute-binding protein family 5; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_004057367.1	COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: msv:Mesil_1368 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004057368.1	COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: msv:Mesil_1369 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004057369.1	COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterProIPR017871: IPR010066: IPR003593: IPR003439: IPR 013563; KEGG: msv:Mesil_1370 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: Oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
YP_004057370.1	COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterProIPR017871: IPR010066: IPR003593: IPR003439: IPR 013563; KEGG: ttj:TTHA0473 peptide ABC transporter, ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; SPTR: Oligopeptide transport ATP-binding protein appF; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
YP_004057371.1	COGs: COG5316 conserved hypothetical protein; KEGG: msv:Mesil_1372 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057372.1	COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; KEGG: msv:Mesil_1373 peptidase S9 prolyl oligopeptidase active site domain protein; SPTR: Peptidase S9 prolyl oligopeptidase active site domain protein; PFAM: Prolyl oligopeptidase family
YP_004057373.1	KEGG: npu:Npun_BF050 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057374.1	KEGG: nca:Noca_1169 xanthine dehydrogenase, molybdenum binding subunit apoprotein; SPTR: Xanthine dehydrogenase, molybdenum binding subunit apoprotein
YP_004057375.1	COGs: COG0641 AryLSUlfatase regulator (Fe-S oxidoreductase); InterPro IPR006638: IPR007197; KEGG: gtn:GTNG_3219 aryLSUlfatase regulator Fe-S oxidoreductase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Radical SAM domain protein; PFAM: Radical SAM superfamily
YP_004057376.1	KEGG: tra:Trad_1363 transcriptional regulator; SPTR: Transcriptional regulator domain protein
YP_004057377.1	COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765: IPR007863; KEGG: adg:Adeg_1653 peptidase M16 domain protein; PFAM: peptidase M16 domain protein; SPTR: Peptidase M16 domain protein; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16)
YP_004057378.1	KEGG: ach:Achl_0746 transcriptional regulator, ArsR family; SPTR: Sugar-specific transcriptional regulator TrmB family
YP_004057379.1	InterPro IPR011701; KEGG: msv:Mesil_2640 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily
YP_004057380.1	COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006089: IPR006092: IPR006091: IPR006090; KEGG: msv:Mesil_1085 acyl-CoA dehydrogenase domain protein; PFAM: acyl-CoA dehydrogenase domain-containing protein; SPTR: Acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_004057381.1	KEGG: msv:Mesil_2366 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3108)
YP_004057382.1	COGs: COG0141 Histidinol dehydrogenase; InterPro IPR001692: IPR012131; KEGG: msv:Mesil_2365 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase; PRIAM: Histidinol dehydrogenase; SPTR: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase
YP_004057383.1	COGs: COG0344 membrane protein; InterPro IPR003811; KEGG: mrb:Mrub_2697 hypothetical protein; PFAM: protein of unknown function DUF205; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF205); TIGRFAM: acyl-phosphate glycerol 3-phosphate acyltransferase
YP_004057384.1	COGs: COG2185 Methylmalonyl-CoA mutase C-terminal domain/subunit (cobalamin-binding); InterPro IPR006159: IPR006158; KEGG: ttj:TTHA1038 methylmalonyl-CoA mutase, alpha subunit, chain B; PFAM: cobalamin B12-binding domain protein; SPTR: Methylmalonyl-CoA mutase small subunit; PFAM: B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase C-terminal domain
YP_004057385.1	COGs: COG0322 Nuclease subunit of the excinuclease complex; InterPro IPR004791: IPR000305: IPR001943: IPR001162; KEGG: msv:Mesil_1509 excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; UvrB/UvrC protein; SMART: Excinuclease ABC C subunit domain protein; SPTR: Excinuclease ABC, C subunit; TIGRFAM: excinuclease ABC, C subunit; PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit
YP_004057386.1	KEGG: msv:Mesil_1510 NADH dehydrogenase (quinone); SPTR: NADH dehydrogenase (Quinone); PFAM: NADH-quinone oxidoreductase chain 15
YP_004057387.1	COGs: COG1495 Disulfide bond formation protein DsbB; InterPro IPR012187: IPR003752; KEGG: bay:RBAM_030650 BdbC; PFAM: Disulphide bond formation protein DsbB; SPTR: BdbC; PFAM: Disulfide bond formation protein DsbB
YP_004057388.1	COGs: COG0552 Signal recognition particle GTPase; InterPro IPR000897: IPR004390: IPR003593: IPR013822; KEGG: mrb:Mrub_0402 signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; SPTR: Signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY
YP_004057389.1	COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; InterPro IPR001412: IPR004527: IPR020060: IPR020058; KEGG: ttj:TTHA0438 glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; SPTR: Glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family
YP_004057390.1	COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006061: IPR006059; KEGG: msv:Mesil_2657 extracellular solute-binding protein family 1; PFAM: extracellular solute-binding protein family 1; SPTR: Extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding protein
YP_004057391.1	COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: msv:Mesil_2656 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004057392.1	COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: msv:Mesil_2655 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004057393.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR000169: IPR000683: IPR004104; KEGG: msv:Mesil_2654 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain
YP_004057394.1	COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: msv:Mesil_2653 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain
YP_004057395.1	COGs: COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; InterProIPR018274: IPR000121: IPR006319: IPR006318: IPR 002192: IPR008279; KEGG: tra:Trad_1799 phosphoenolpyruvate synthase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; PEP-utilizing protein; SPTR: Phosphoenolpyruvate synthase; TIGRFAM: phosphoenolpyruvate synthase; PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: phosphoenolpyruvate synthase
YP_004057396.1	COGs: COG1968 Uncharacterized bacitracin resistance protein; InterPro IPR003824; KEGG: amr:AM1_1064 undecaprenyl-diphosphatase, putative; PFAM: Bacitracin resistance protein BacA; SPTR: Undecaprenyl-diphosphatase; PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP
YP_004057397.1	COGs: COG0103 Ribosomal protein S9; InterPro IPR000754; KEGG: msv:Mesil_1940 ribosomal protein S9; PFAM: ribosomal protein S9; SPTR: Ribosomal protein S9; PFAM: Ribosomal protein S9/S16
YP_004057398.1	COGs: COG0102 Ribosomal protein L13; InterPro IPR005822: IPR005823; KEGG: ttj:TTHA1465 50S ribosomal protein L13; PFAM: ribosomal protein L13; SPTR: 50S ribosomal protein L13; TIGRFAM: ribosomal protein L13; PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type; ribosomal protein L13, archaeal/eukaryotic
YP_004057399.1	COGs: COG2154 Pterin-4a-carbinolamine dehydratase; InterPro IPR001533; KEGG: msv:Mesil_1942 transcriptional coactivator/pterin dehydratase; PFAM: transcriptional coactivator/pterin dehydratase; SPTR: Transcriptional coactivator/pterin dehydratase; PFAM: Pterin 4 alpha carbinolamine dehydratase
YP_004057400.1	COGs: COG0137 Argininosuccinate synthase; InterPro IPR018223: IPR001518; KEGG: ttj:TTHA0284 argininosuccinate synthase; PFAM: argininosuccinate synthase; PRIAM: Argininosuccinate synthase; SPTR: Argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase
YP_004057401.1	COGs: COG0165 Argininosuccinate lyase; InterPro IPR020557: IPR009049: IPR003031: IPR000362; KEGG: tth:TTC1702 argininosuccinate lyase; PFAM: fumarate lyase; SPTR: Argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: Lyase; TIGRFAM: argininosuccinate lyase
YP_004057402.1	COGs: COG1246 N-acetylglutamate synthase and related acetyltransferase; InterPro IPR000182; KEGG: ttj:TTHA0282 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Amino-acid acetyltransferase; PFAM: Acetyltransferase (GNAT) family
YP_004057403.1	COGs: COG0505 Carbamoylphosphate synthase small subunit; InterProIPR006274: IPR001317: IPR011702: IPR006220: IPR 017926: IPR002474: IPR000991; KEGG: ttj:TTHA0280 carbamoyl phosphate synthase small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I; SPTR: Carbamoyl-phosphate synthase small chain; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit
YP_004057404.1	InterPro IPR013096; KEGG: mhu:Mhun_1738 cupin 2, barrel; PFAM: Cupin 2 conserved barrel domain protein; SPTR: Cupin 2, conserved barrel; PFAM: Cupin domain
YP_004057405.1	COGs: COG2759 Formyltetrahydrofolate synthetase; InterPro IPR020628: IPR000559; KEGG: tth:TTC1707 formate-tetrahydrofolate ligase; PFAM: formate-tetrahydrofolate ligase FTHFS; PRIAM: Formate--tetrahydrofolate ligase; SPTR: Formate--tetrahydrofolate ligase; PFAM: Formate--tetrahydrofolate ligase
YP_004057406.1	COGs: COG0621 2-methylthioadenine synthetase; InterProIPR020612: IPR005839: IPR006467: IPR006638: IPR 002792: IPR013848: IPR006158: IPR007197; KEGG: msv:Mesil_2352 MiaB-like tRNA modifying enzyme; PFAM: protein of unknown function UPF0004; cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: MiaB-like tRNA modifying enzyme; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: Radical SAM superfamily; B12 binding domain; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme; RNA modification enzyme, MiaB family
YP_004057407.1	COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310; KEGG: tth:TTC1253 histidine nucleotide-binding protein; PFAM: histidine triad (HIT) protein; SPTR: Histidine triad (HIT) protein; PFAM: HIT domain
YP_004057408.1	COGs: COG1259 conserved hypothetical protein; InterPro IPR003729; KEGG: ttj:TTHA1615 hypothetical protein; PFAM: protein of unknown function DUF151; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised ACR, COG1259
YP_004057409.1	COGs: COG0503 Adenine/guanine phosphoribosyltransferase and related PRPP-binding protein; InterPro IPR000836; KEGG: ttj:TTHA1614 adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; SPTR: Adenine phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain
YP_004057410.1	COGs: COG0503 Adenine/guanine phosphoribosyltransferase and related PRPP-binding protein; InterPro IPR000836; KEGG: ttj:TTHA1613 adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; SPTR: Adenine phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain
YP_004057411.1	COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR017871: IPR003593: IPR003439; KEGG: msv:Mesil_2073 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter; PFAM: ABC transporter
YP_004057412.1	COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR018488: IPR001808: IPR000595: IPR012318; KEGG: mrb:Mrub_2129 Crp/Fnr family transcriptional regulator; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; SPTR: Transcriptional regulator, Crp/Fnr family; PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain
YP_004057413.1	COGs: COG0036 Pentose-5-phosphate-3-epimerase; InterPro IPR000056; KEGG: msv:Mesil_3251 ketose-bisphosphate aldolase class-II; PFAM: ribulose-phosphate 3-epimerase; PRIAM: Ribulose-phosphate 3-epimerase; SPTR: Ketose-bisphosphate aldolase class-II; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase
YP_004057414.1	COGs: COG2045 Phosphosulfolactate phosphohydrolase; InterPro IPR005238; KEGG: msv:Mesil_3249 hypothetical protein; PFAM: 2-phosphosulfolactate phosphatase; SPTR: Putative uncharacterized protein; PFAM: 2-phosphosulpholactate phosphatase
YP_004057415.1	COGs: COG0813 Purine-nucleoside phosphorylase; InterPro IPR018016: IPR000845; KEGG: ttj:TTHA1435 purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1; SPTR: Purine or other phosphorylase family 1; PFAM: Phosphorylase superfamily; TIGRFAM: purine-nucleoside phosphorylase, family 1 (deoD)
YP_004057416.1	COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR018376: IPR001753; KEGG: msv:Mesil_2071 enoyl-CoA hydratase/isomerase; PFAM: Enoyl-CoA hydratase/isomerase; SPTR: 3-hydroxybutyryl-CoA dehydratase; PFAM: Enoyl-CoA hydratase/isomerase family
YP_004057417.1	COGs: COG3294 conserved hypothetical protein; KEGG: ttj:TTHA1433 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057418.1	COGs: COG0861 Membrane protein TerC possibly involved in tellurium resistance; InterPro IPR005496; KEGG: afl:Aflv_0302 membrane protein TerC ortholog; PFAM: Integral membrane protein TerC; SPTR: Membrane protein TerC ortholog; PFAM: Integral membrane protein TerC family; TIGRFAM: integral membrane protein, YjbE family
YP_004057419.1	COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595: IPR001808: IPR012318; KEGG: tra:Trad_0639 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; regulatory protein Crp; SPTR: Transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain
YP_004057420.1	COGs: COG1926 phosphoribosyltransferase; InterPro IPR000836; KEGG: msv:Mesil_1594 phosphoribosyltransferase; PFAM: phosphoribosyltransferase; SPTR: Phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain
YP_004057421.1	COGs: COG1917 conserved hypothetical protein contains double-stranded beta-helix domain; InterPro IPR013096; KEGG: ttj:TTHA1461 hypothetical protein; PFAM: Cupin 2 conserved barrel domain protein; SPTR: Putative uncharacterized protein; PFAM: Cupin domain
YP_004057422.1	COGs: COG1277 ABC-type transport system involved in multi-copper enzyme maturation permease component; KEGG: msv:Mesil_1625 ABC transporter; SPTR: ABC transporter
YP_004057423.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: chl:Chy400_2663 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter
YP_004057424.1	COGs: COG1470 membrane protein; KEGG: mrb:Mrub_0459 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: NPCBM-associated, NEW3 domain of alpha-galactosidase
YP_004057425.1	COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; InterPro IPR020558: IPR004404: IPR000581; KEGG: sti:Sthe_1518 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; PRIAM: Dihydroxy-acid dehydratase; SPTR: Dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase
YP_004057426.1	COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002347: IPR002198; KEGG: ttj:TTHA1233 short-chain dehydrogenase/reductase family protein; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenases/reductases family protein; PFAM: short chain dehydrogenase
YP_004057427.1	COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase; InterPro IPR018483: IPR019818: IPR004429: IPR001804; KEGG: mrb:Mrub_1846 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; PRIAM: 3-isopropylmalate dehydrogenase; SPTR: 3-isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase
YP_004057428.1	COGs: COG0066 3-isopropylmalate dehydratase small subunit; InterPro IPR004431: IPR000573; KEGG: tth:TTC0866 isopropylmalate isomerase small subunit; PFAM: aconitate hydratase domain-containing protein; SPTR: 3-isopropylmalate dehydratase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit
YP_004057429.1	COGs: COG0065 3-isopropylmalate dehydratase large subunit; InterPro IPR018136: IPR004430: IPR001030; KEGG: mrb:Mrub_1850 3-isopropylmalate dehydratase large subunit; PFAM: aconitate hydratase domain-containing protein; SPTR: 3-isopropylmalate dehydratase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit
YP_004057430.1	KEGG: api:100167703 similar to conserved hypothetical protein; SPTR: Predicted CDS Pa_1_2880
YP_004057431.1	COGs: COG0028 Thiamine pyrophosphate-requiring protein; InterProIPR000399: IPR012846: IPR012001: IPR012000: IPR 011766; KEGG: tth:TTC0852 acetolactate synthase large subunit; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; SPTR: Acetolactate synthase; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type
YP_004057432.1	COGs: COG0440 Acetolactate synthase small (regulatory) subunit; InterPro IPR004789: IPR002912: IPR019455; KEGG: ttj:TTHA1212 acetolactate synthase 3 regulatory subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein; SPTR: Acetolactate synthase, small subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit
YP_004057433.1	COGs: COG0059 Ketol-acid reductoisomerase; InterPro IPR013023: IPR013116: IPR000506; KEGG: ttj:TTHA1211 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase catalytic domain-containing protein; acetohydroxy acid isomeroreductase; PRIAM: Ketol-acid reductoisomerase; SPTR: Ketol-acid reductoisomerase; TIGRFAM: ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase
YP_004057434.1	COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR002034: IPR005671: IPR000891: IPR013709; KEGG: msv:Mesil_2141 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain-containing protein; SPTR: 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase, bacterial type
YP_004057435.1	KEGG: cwo:Cwoe_2102 acetyltransferase; SPTR: Putative uncharacterized protein
YP_004057436.1	COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR002034: IPR005675: IPR000891: IPR013709; KEGG: tth:TTC0847 alpha-isopropylmalate/homocitrate synthase family transferase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain-containing protein; SPTR: 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein
YP_004057437.1	KEGG: ara:Arad_14041 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057438.1	COGs: COG3629 DNA-binding transcriptional activator of the SARP family; InterPro IPR019734: IPR005158: IPR001440; KEGG: msv:Mesil_2154 transcriptional activator domain protein; PFAM: transcriptional activator domain; Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Transcriptional activator domain protein; PFAM: Bacterial transcriptional activator domain
YP_004057439.1	COGs: COG1922 Teichoic acid biosynthesis protein; InterPro IPR004629; KEGG: ttj:TTHA0422 UDP-N-acetyl-D-mannosaminuronic acid transferase; PFAM: glycosyl transferase WecB/TagA/CpsF; PRIAM: N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase; SPTR: Glycosyl transferase, WecB/TagA/CpsF family; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: Glycosyl transferase WecB/TagA/CpsF family; TIGRFAM: bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family
YP_004057440.1	COGs: COG2045 Phosphosulfolactate phosphohydrolase; InterPro IPR005238; KEGG: tra:Trad_1379 2-phosphosulfolactate phosphatase; PFAM: 2-phosphosulfolactate phosphatase; SPTR: 2-phosphosulfolactate phosphatase; PFAM: 2-phosphosulpholactate phosphatase
YP_004057441.1	COGs: COG1386 transcriptional regulator protein containing the HTH domain; InterPro IPR022272: IPR005234; KEGG: ttj:TTHA0792 hypothetical protein; PFAM: chromosome segregation and condensation protein ScpB; SPTR: Chromosome segregation and condensation protein, ScpB; TIGRFAM: segregation and condensation protein B; PFAM: Putative transcriptional regulators (Ypuh-like); TIGRFAM: segregation and condensation protein B
YP_004057442.1	COGs: COG0009 Putative translation factor (SUA5); InterPro IPR004388: IPR006070; KEGG: ttj:TTHA0793 hypothetical protein; PFAM: SUA5/yciO/yrdC domain; SPTR: Sua5 protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein
YP_004057443.1	COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR001992: IPR003004: IPR018076; KEGG: msv:Mesil_2136 type II secretion system F domain protein; PFAM: Type II secretion system F domain; SPTR: Type II secretion system F domain protein; PFAM: Bacterial type II secretion system protein F domain
YP_004057444.1	COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase; InterPro IPR020556: IPR004412: IPR000120; KEGG: msv:Mesil_2205 glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase; PRIAM: Amidase; SPTR: Glutamyl-tRNA(Gln) amidotransferase, A subunit; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit
YP_004057445.1	COGs: COG2176 DNA polymerase III alpha subunit (gram-positive type); InterPro IPR006055: IPR013520; KEGG: msv:Mesil_2204 DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; PRIAM: DNA-directed DNA polymerase; SMART: Exonuclease; SPTR: DNA polymerase III, epsilon subunit; PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family
YP_004057446.1	KEGG: mrb:Mrub_1502 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057447.1	COGs: COG2327 conserved hypothetical protein; InterPro IPR019896; KEGG: msv:Mesil_2202 polysaccharide pyruvyl transferase CsaB; SPTR: Polysaccharide pyruvyl transferase CsaB; TIGRFAM: polysaccharide pyruvyl transferase CsaB; PFAM: Polysaccharide pyruvyl transferase; TIGRFAM: polysaccharide pyruvyl transferase CsaB
YP_004057448.1	KEGG: ttj:TTHA0577 hypothetical protein; SPTR: Putative uncharacterized protein TTHA0577
YP_004057449.1	COGs: COG0572 Uridine kinase; InterPro IPR017975: IPR000764; KEGG: dge:Dgeo_0202 uridine kinase; SPTR: Uridine kinase; TIGRFAM: uridine kinase; PFAM: Phosphoribulokinase / Uridine kinase family; TIGRFAM: uridine kinase
YP_004057450.1	COGs: COG2873 O-acetylhomoserine sulfhydrylase; InterPro IPR006235: IPR000277; KEGG: tth:TTC0408 O-acetyl-L-(homo)serine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; PRIAM: Cysteine synthase; SPTR: O-acetylhomoserine/O-acetylserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase
YP_004057451.1	COGs: COG2021 Homoserine acetyltransferase; InterPro IPR006296: IPR008220: IPR000073; KEGG: ttj:TTHA0759 homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold; PRIAM: Homoserine O-acetyltransferase; SPTR: Homoserine O-acetyltransferase; TIGRFAM: homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold; TIGRFAM: homoserine O-acetyltransferase
YP_004057452.1	KEGG: sgr:SGR_4218 major facilitator superfamily permease; SPTR: Putative uncharacterized protein
YP_004057453.1	COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR017936: IPR003782; KEGG: tra:Trad_0286 electron transport protein SCO1/SenC; PFAM: electron transport protein SCO1/SenC; SPTR: Electron transport protein SCO1/SenC; PFAM: SCO1/SenC
YP_004057454.1	COGs: COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); InterProIPR018239: IPR001679: IPR013840: IPR003583: IPR 001357: IPR013839: IPR004150: IPR004149: IPR000445; KEGG: msv:Mesil_2086 DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; NAD-dependent DNA ligase OB-fold; helix-hairpin-helix motif; BRCT domain protein; PRIAM: DNA ligase (NAD(+)); SMART: NAD-dependent DNA ligase; Helix-hairpin-helix DNA-binding class 1; BRCT domain protein; SPTR: DNA ligase; TIGRFAM: DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; BRCA1 C Terminus (BRCT) domain; NAD-dependent DNA ligase C4 zinc finger domain; Helix-hairpin-helix motif; TIGRFAM: DNA ligase, NAD-dependent
YP_004057455.1	COGs: COG1744 Uncharacterized ABC-type transport system periplasmic component/surface lipoprotein; InterPro IPR003760; KEGG: msv:Mesil_2088 basic membrane lipoprotein; PFAM: basic membrane lipoprotein; SPTR: Basic membrane lipoprotein; PFAM: Basic membrane protein
YP_004057456.1	COGs: COG3845 ABC-type uncharacterized transport systems ATPase components; InterPro IPR017871: IPR003593: IPR003439; KEGG: mrb:Mrub_1668 ABC transporter-like protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter; PFAM: ABC transporter
YP_004057457.1	COGs: COG1692 conserved hypothetical protein; InterPro IPR004843; KEGG: ttj:TTHA0625 hypothetical protein; PFAM: metallophosphoesterase; SPTR: Putative uncharacterized protein TTHA0625; TIGRFAM: metallophosphoesterase, MG_246/BB_0505 family
YP_004057458.1	COGs: COG2352 Phosphoenolpyruvate carboxylase; InterPro IPR018129: IPR001449: IPR021135; KEGG: msv:Mesil_1653 phosphoenolpyruvate carboxylase; PFAM: Phosphoenolpyruvate carboxylase, C-terminal region; PRIAM: Phosphoenolpyruvate carboxylase; SPTR: Phosphoenolpyruvate carboxylase; PFAM: Phosphoenolpyruvate carboxylase
YP_004057459.1	COGs: COG1409 phosphohydrolase; InterPro IPR004843; KEGG: rxy:Rxyl_1658 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase
YP_004057460.1	COGs: COG1432 conserved hypothetical protein; KEGG: msv:Mesil_1654 protein of unknown function DUF88; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF88
YP_004057461.1	COGs: COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); InterPro IPR003699; KEGG: ttj:TTHA1058 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; SPTR:S-adenosylmethionine/tRNA-ribosyltransferase-i somerase; TIGRFAM:S-adenosylmethionine/tRNA-ribosyltransferas e-isomerase; PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase
YP_004057462.1	COGs: COG0358 DNA primase; InterProIPR006295: IPR002694: IPR006154: IPR013264: IPR 006171; KEGG: msv:Mesil_2268 DNA primase; PFAM: DNA primase catalytic core domain; TOPRIM domain-containing protein; SMART: Toprim sub domain-containing protein; SPTR: DNA primase; TIGRFAM: DNA primase; PFAM: Toprim domain; CHC2 zinc finger; DNA primase catalytic core, N-terminal domain; TIGRFAM: DNA primase, catalytic core
YP_004057463.1	COGs: COG3899 ATPase; InterPro IPR001054; KEGG: mrb:Mrub_1682 adenylate/guanylate cyclase; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; SPTR: Putative adenylate/guanylate cyclase; PFAM: Adenylate and Guanylate cyclase catalytic domain
YP_004057464.1	KEGG: msv:Mesil_2266 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057465.1	COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827: IPR000184; KEGG: msv:Mesil_2265 surface antigen (D15); PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein; SPTR: Surface antigen (D15); PFAM: Surface antigen variable number repeat; Surface antigen; POTRA domain, ShlB-type; TIGRFAM: outer membrane protein assembly complex, YaeT protein
YP_004057466.1	COGs: COG0005 Purine nucleoside phosphorylase; InterPro IPR018099: IPR011268: IPR011270: IPR000845; KEGG: tth:TTC0194 purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1; SPTR: Purine-nucleoside phosphorylase; TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine guanosine and xanthosine phosphorylase family; PFAM: Phosphorylase superfamily; TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine guanosine and xanthosine phosphorylase family
YP_004057467.1	COGs: COG0325 enzyme with a TIM-barrel fold; InterPro IPR011078: IPR001608; KEGG: msv:Mesil_2263 alanine racemase domain protein; PFAM: alanine racemase domain protein; SPTR: Alanine racemase domain protein; PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family
YP_004057468.1	InterPro IPR019933: IPR007793; KEGG: mrb:Mrub_1690 DivIVA family protein; PFAM: DivIVA family protein; SPTR: DivIVA family protein; TIGRFAM: DivIVA domain; PFAM: DivIVA protein; TIGRFAM: DivIVA domain
YP_004057469.1	COGs: COG2949 Uncharacterized membrane protein; InterPro IPR003848; KEGG: msv:Mesil_2261 protein of unknown function DUF218; PFAM: protein of unknown function DUF218; SPTR: Putative uncharacterized protein; PFAM: DUF218 domain
YP_004057470.1	COGs: COG2262 GTPase; InterPro IPR016496: IPR006073: IPR002917; KEGG: mrb:Mrub_1687 GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; SPTR: GTP-binding proten HflX; TIGRFAM: GTP-binding proten HflX; PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX; small GTP-binding protein domain
YP_004057471.1	COGs: COG0760 Parvulin-like peptidyl-prolyl isomerase; InterPro IPR000297; KEGG: tth:TTC0233 peptidyl-prolyl cis-trans isomerase; PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SPTR: Probable peptidyl-prolyl cis-trans isomerase; PFAM: SurA N-terminal domain; PPIC-type PPIASE domain
YP_004057472.1	COGs: COG1600 Uncharacterized Fe-S protein; InterPro IPR017900: IPR017896: IPR013542; KEGG: mrb:Mrub_1139 domain of unknown function DUF1730; PFAM: domain of unknown function DUF1730; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1730); TIGRFAM: iron-sulfur cluster binding protein, putative
YP_004057473.1	InterPro IPR011152: IPR004843; KEGG: msv:Mesil_1363 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase; TIGRFAM: phosphoesterase, MJ0936 family
YP_004057474.1	COGs: COG0815 Apolipoprotein N-acyltransferase; InterPro IPR022272: IPR004563: IPR003010; KEGG: msv:Mesil_1364 apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Apolipoprotein N-acyltransferase; TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase
YP_004057475.1	COGs: COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful); InterPro IPR002695: IPR013982: IPR011607; KEGG: ttj:TTHA0930 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein; PRIAM: Phosphoribosylaminoimidazolecarboxamide formyltransferase; SMART: AICARFT/IMPCHase bienzyme formylation region; SPTR: Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
YP_004057476.1	KEGG: cti:RALTA_A0025 transporter, MSF family; drug resistance transporter EmrB/QacA subfamily; SPTR: Putative transporter, MSF family; Drug resistance transporter EmrB/QacA subfamily
YP_004057477.1	COGs: COG1573 Uracil-DNA glycosylase; InterPro IPR005273: IPR005122; KEGG: ttj:TTHA0718 uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase superfamily; SPTR: Uracil-DNA glycosylase; TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4
YP_004057478.1	KEGG: mrb:Mrub_1939 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057479.1	KEGG: msv:Mesil_2185 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057480.1	COGs: COG0519 GMP synthase PP-ATPase domain/subunit; InterProIPR004739: IPR001674: IPR011702: IPR006220: IPR 017926: IPR000991: IPR011063; KEGG: ttj:TTHA1552 GMP synthase; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I; PP-loop domain protein; SPTR: GMP synthase [glutamine-hydrolyzing]; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; manually curated; PFAM: Glutamine amidotransferase class-I; GMP synthase C terminal domain; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit
YP_004057481.1	COGs: COG0328 Ribonuclease HI; InterPro IPR002156; KEGG: tra:Trad_2665 ribonuclease H; PFAM: ribonuclease H; PRIAM: Ribonuclease H; SPTR: Ribonuclease H; PFAM: RNase H
YP_004057482.1	InterPro IPR017936: IPR000866; KEGG: noc:Noc_0989 hypothetical protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Putative uncharacterized protein; PFAM: AhpC/TSA family
YP_004057483.1	InterPro IPR009056: IPR011031; KEGG: gme:Gmet_0142 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057484.1	COGs: COG1881 Phospholipid-binding protein; InterPro IPR005247: IPR008914; KEGG: cya:CYA_2243 phosphatidylethanolamine-binding protein; PFAM: PEBP family protein; SPTR: Putative phosphatidylethanolamine-binding protein; PFAM: Phosphatidylethanolamine-binding protein; TIGRFAM: Raf kinase inhibitor-like protein, YbhB/YbcL family
YP_004057485.1	COGs: COG2345 transcriptional regulator protein; KEGG: mrb:Mrub_2175 transcriptional regulator TrmB; SPTR: Transcriptional regulator, TrmB; PFAM: HTH domain
YP_004057486.1	KEGG: acr:Acry_2688 peptidoglycan-binding LysM; SPTR: Peptidoglycan-binding LysM
YP_004057487.1	KEGG: meh:M301_0649 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057488.1	COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR006140: IPR006139; KEGG: msv:Mesil_2536 glyoxylate reductase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; PRIAM: Glyoxylate reductase; SPTR: Glyoxylate reductase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
YP_004057489.1	KEGG: msv:Mesil_1457 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057490.1	InterPro IPR000182; KEGG: aha:AHA_3083 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Acetyltransferase, GNAT family; PFAM: Acetyltransferase (GNAT) family
YP_004057491.1	COGs: COG1200 RecG-like helicase; InterProIPR019793: IPR004609: IPR014001: IPR001650: IPR 014021: IPR004365: IPR011545; KEGG: mrb:Mrub_2192 ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: ATP-dependent DNA helicase RecG; TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG
YP_004057492.1	COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765: IPR007863; KEGG: msv:Mesil_1461 processing peptidase; PFAM: peptidase M16 domain protein; SPTR: Processing peptidase; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16)
YP_004057493.1	COGs: COG0612 Zn-dependent peptidase; InterPro IPR001431: IPR011765: IPR007863; KEGG: msv:Mesil_1462 peptidase M16 domain protein; PFAM: peptidase M16 domain protein; SPTR: Peptidase M16 domain protein; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16)
YP_004057494.1	COGs: COG2340 Uncharacterized protein with SCP/PR1 domains; InterPro IPR014044; KEGG: mrb:Mrub_2188 SCP-like extracellular; PFAM: SCP-like extracellular; SPTR: SCP-like extracellular; PFAM: Cysteine-rich secretory protein family
YP_004057495.1	KEGG: mrb:Mrub_2356 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057496.1	InterPro IPR000620; KEGG: ttj:TTHA1263 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: Putative uncharacterized protein TTHA1263; PFAM: EamA-like transporter family
YP_004057497.1	COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR002034: IPR000891: IPR013709; KEGG: dth:DICTH_1068 alpha-isopropylmalate/homocitrate synthase family transferase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain-containing protein; SPTR: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein
YP_004057498.1	COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterPro IPR006180: IPR006176: IPR006108; KEGG: msv:Mesil_1466 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; PRIAM: 3-hydroxybutyryl-CoA dehydrogenase; SPTR: 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
YP_004057499.1	COGs: COG1884 Methylmalonyl-CoA mutase N-terminal domain/subunit; InterPro IPR006098: IPR006099; KEGG: tth:TTC0677 methylmalonyl-CoA mutase large subunit; PFAM: methylmalonyl-CoA mutase; PRIAM: Methylmalonyl-CoA mutase; SPTR: Methylmalonyl-CoA mutase large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: Methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain
YP_004057500.1	COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641; KEGG: afw:Anae109_2892 patatin; PFAM: Patatin; SPTR: Patatin; PFAM: Patatin-like phospholipase
YP_004057501.1	COGs: COG1381 Recombinational DNA repair protein (RecF pathway); InterPro IPR003717; KEGG: msv:Mesil_1721 DNA repair protein RecO; PFAM: Recombination protein O RecO; SPTR: DNA repair protein RecO; PFAM: Recombination protein O C terminal; Recombination protein O N terminal; TIGRFAM: DNA repair protein RecO
YP_004057502.1	COGs: COG2986 Histidine ammonia-lyase; InterPro IPR001106: IPR005921; KEGG: msv:Mesil_1637 histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase; PRIAM: Histidine ammonia-lyase; SPTR: Histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; PFAM: Phenylalanine and histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase
YP_004057503.1	KEGG: msv:Mesil_1722 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057504.1	COGs: COG1032 Fe-S oxidoreductase; InterPro IPR006638: IPR007197; KEGG: dge:Dgeo_1159 radical SAM family protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Radical SAM superfamily enzyme; PFAM: Radical SAM superfamily
YP_004057505.1	COGs: COG0285 Folylpolyglutamate synthase; InterPro IPR001645: IPR013221: IPR004101; KEGG: tth:TTC0975 folylpolyglutamate synthase/dihydrofolate synthase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; SPTR: Folylpolyglutamate synthase/dihydrofolate synthase; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase
YP_004057506.1	KEGG: tth:TTC0974 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057507.1	COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: tth:TTC0973 dipeptide ABC transporter permease DppC; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Dipeptide ABC transporter permease dppC; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004057508.1	COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: tra:Trad_1293 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004057509.1	COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: tra:Trad_1292 extracellular solute-binding protein family 5; PFAM: extracellular solute-binding protein family 5; SPTR: Extracellular solute-binding protein family 5; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_004057510.1	COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR017871: IPR003593: IPR003439; KEGG: tra:Trad_0975 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter; PFAM: ABC transporter
YP_004057511.1	COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003593: IPR003439; KEGG: tra:Trad_0974 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter
YP_004057512.1	COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: tra:Trad_0973 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component
YP_004057513.1	COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: tra:Trad_0972 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Inner-membrane translocator; PFAM: Branched-chain amino acid transport system / permease component
YP_004057514.1	COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: tra:Trad_0971 extracellular ligand-binding receptor; PFAM: Extracellular ligand-binding receptor; SPTR: Extracellular ligand-binding receptor; PFAM: Receptor family ligand binding region
YP_004057515.1	COGs: COG0174 Glutamine synthetase; InterPro IPR008147: IPR008146: IPR004809; KEGG: ttj:TTHA1329 glutamine synthetase; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; PRIAM: Glutamate--ammonia ligase; SPTR: Glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: Basic membrane protein; Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I
YP_004057516.1	COGs: COG0737 5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterase; InterPro IPR006179: IPR004843: IPR008334; KEGG: azl:AZL_c02340 5'-nucleotidase; PFAM: 5'-Nucleotidase domain-containing protein; metallophosphoesterase; SPTR: 5'-nucleotidase; PFAM: 5'-nucleotidase, C-terminal domain; Calcineurin-like phosphoesterase
YP_004057517.1	COGs: COG0492 Thioredoxin reductase; InterPro IPR000103: IPR013027; KEGG: ttj:TTHA0465 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Cytoplasmic ferric reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_004057518.1	COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR001808: IPR000595: IPR012318; KEGG: msv:Mesil_2484 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; SPTR: Transcriptional regulator, Crp/Fnr family; PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain
YP_004057519.1	COGs: COG1324 conserved hypothetical protein involved in tolerance to divalent cations; InterPro IPR004323; KEGG: ttj:TTHA1356 divalent cation tolerance protein (Cut A1); PFAM: CutA1 divalent ion tolerance protein; SPTR: Divalent cation tolerance protein; PFAM: CutA1 divalent ion tolerance protein
YP_004057520.1	COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterPro IPR005743: IPR002205: IPR006691; KEGG: msv:Mesil_2474 DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA gyrase/topoisomerase IV subunit A; SPTR: DNA gyrase, A subunit; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit
YP_004057521.1	COGs: COG2947 conserved hypothetical protein; InterPro IPR002740; KEGG: cya:CYA_0968 hypothetical protein; PFAM: protein of unknown function DUF55; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF55
YP_004057522.1	COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR016166: IPR006094: IPR004113; KEGG: msv:Mesil_2133 FAD linked oxidase domain protein; PFAM: FAD linked oxidase domain protein; SPTR: FAD linked oxidase domain protein; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD
YP_004057523.1	KEGG: mrb:Mrub_2566 diguanylate cyclase/phosphodiesterase with GAF sensor; SPTR: Diguanylate cyclase/phosphodiesterase with GAF sensor
YP_004057524.1	COGs: COG0483 fructose-1 6-bisphosphatase of inositol monophosphatase family; InterPro IPR019825: IPR020583: IPR020550: IPR000760; KEGG: msv:Mesil_1534 inositol monophosphatase; PFAM: inositol monophosphatase; SPTR: Inositol monophosphatase; PFAM: Inositol monophosphatase family
YP_004057525.1	COGs: COG2890 Methylase of polypeptide chain release factors; InterPro IPR002052: IPR004556: IPR019874: IPR007848; KEGG: tth:TTC0073 methyltransferase; PFAM: methyltransferase small; SPTR: Methyltransferase; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; PFAM: Methyltransferase small domain; TIGRFAM: HemK family methylases; protein-(glutamine-N5) methyltransferase, release factor-specific
YP_004057526.1	COGs: COG1847 RNA-binding protein; InterPro IPR001374; KEGG: msv:Mesil_1536 single-stranded nucleic acid binding R3H domain protein; PFAM: single-stranded nucleic acid binding R3H domain-containing protein; SMART: single-stranded nucleic acid binding R3H domain-containing protein; SPTR: Single-stranded nucleic acid binding R3H domain protein; PFAM: R3H domain
YP_004057527.1	COGs: COG0706 Preprotein translocase subunit YidC; InterPro IPR020001: IPR001708; KEGG: msv:Mesil_1537 membrane protein insertase, YidC/Oxa1 family; PFAM: 60 kDa inner membrane insertion protein; SPTR: Membrane protein insertase, YidC/Oxa1 family; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain
YP_004057528.1	COGs: COG0759 conserved hypothetical protein; InterPro IPR002696; KEGG: msv:Mesil_1538 protein of unknown function DUF37; PFAM: protein of unknown function DUF37; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein YidD
YP_004057529.1	InterPro IPR020539: IPR000100; KEGG: tth:TTC0077 ribonuclease P protein subunit; PFAM: ribonuclease P protein; SPTR: Ribonuclease P protein component; TIGRFAM: ribonuclease P protein component; manually curated; PFAM: Aldo/keto reductase family; Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial
YP_004057530.1	InterPro IPR020939: IPR000271; KEGG: ttj:TTHA0446 50S ribosomal protein L34; PFAM: ribosomal protein L34; SPTR: 50S ribosomal protein L34; TIGRFAM: ribosomal protein L34; PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type
YP_004057531.1	COGs: COG0180 Tryptophanyl-tRNA synthetase; InterPro IPR001412: IPR002306: IPR002305; KEGG: ttj:TTHA1227 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; PRIAM: Tryptophan--tRNA ligase; SPTR: Tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase
YP_004057532.1	COGs: COG1354 conserved hypothetical protein; KEGG: mrb:Mrub_0934 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057533.1	COGs: COG2129 phosphoesterase related to the Icc protein; KEGG: ttj:TTHA1483 hypothetical protein; SPTR: Heat-stable protein
YP_004057534.1	COGs: COG2206 HD-GYP domain; InterPro IPR006675: IPR003018: IPR003607: IPR006674; KEGG: msv:Mesil_3117 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; GAF domain protein; SMART: metal-dependent phosphohydrolase HD region; GAF domain protein; SPTR: Metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: HD domain; GAF domain; TIGRFAM: uncharacterized domain HDIG
YP_004057535.1	COGs: COG0183 Acetyl-CoA acetyltransferase; InterProIPR020610: IPR020613: IPR002155: IPR020616: IPR 020617; KEGG: rmr:Rmar_1531 acetyl-CoA acetyltransferase; PFAM: Thiolase-like; SPTR: Acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases
YP_004057536.1	COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family; InterPro IPR002563; KEGG: ttj:TTHA0420 flavoprotein; PFAM: flavin reductase domain protein FMN-binding; SPTR: Probable nitrilotriacetate monooxygenase component B; PFAM: Flavin reductase like domain
YP_004057537.1	COGs: COG1550 conserved hypothetical protein; InterPro IPR007546; KEGG: mrb:Mrub_1915 hypothetical protein; PFAM: protein of unknown function DUF503; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF503)
YP_004057538.1	COGs: COG0402 Cytosine deaminase and related metal-dependent hydrolase; InterPro IPR014311: IPR006680; KEGG: mrb:Mrub_1462 guanine deaminase; PFAM: amidohydrolase; SPTR: Guanine deaminase; TIGRFAM: guanine deaminase; PFAM: Amidohydrolase family; TIGRFAM: guanine deaminase
YP_004057539.1	COGs: COG1048 Aconitase A; InterPro IPR018136: IPR006249: IPR001030: IPR000573; KEGG: tth:TTC0374 aconitate hydratase; PFAM: aconitate hydratase domain-containing protein; SPTR: Aconitate hydratase 1; TIGRFAM: aconitate hydratase 1; PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase 1
YP_004057540.1	InterPro IPR006121; KEGG: msv:Mesil_2125 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057541.1	InterPro IPR000182: IPR018987; KEGG: msv:Mesil_2124 protein of unknown function DUF1999; PFAM: Protein of unknown function DUF1999; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1999)
YP_004057542.1	KEGG: mrb:Mrub_2100 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057543.1	KEGG: msv:Mesil_2122 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057544.1	COGs: COG1214 Inactive homolog of metal-dependent protease molecular chaperone; InterPro IPR000905; KEGG: msv:Mesil_2294 peptidase M22 glycoprotease; PFAM: peptidase M22 glycoprotease; SPTR: Peptidase M22 glycoprotease; PFAM: Glycoprotease family
YP_004057545.1	COGs: COG1793 ATP-dependent DNA ligase; InterPro IPR000977: IPR012310: IPR016059: IPR012309; KEGG: aae:aq_1394 ATP-dependent DNA ligase; PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; PRIAM: DNA ligase (ATP); SPTR: DNA ligase; TIGRFAM: DNA ligase I, ATP-dependent Dnl1; PFAM: ATP dependent DNA ligase domain; DNA ligase N terminus; ATP dependent DNA ligase C terminal region; TIGRFAM: DNA ligase I, ATP-dependent (dnl1)
YP_004057546.1	KEGG: ami:Amir_5159 patatin; SPTR: Putative uncharacterized protein
YP_004057547.1	KEGG: rop:ROP_38080 MFS transporter; SPTR: Putative MFS transporter
YP_004057548.1	COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: mrb:Mrub_1222 hypothetical protein; PFAM: protein of unknown function DUF58; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF58
YP_004057549.1	COGs: COG0714 MoxR-like ATPase; InterPro IPR003593: IPR016366: IPR011703; KEGG: mrb:Mrub_2108 ATPase associated with various cellular activities AAA_3; PFAM: ATPase associated with various cellular activities AAA_3; SMART: AAA ATPase; SPTR: ATPase associated with various cellular activities AAA_3; PFAM: ATPase family associated with various cellular activities (AAA)
YP_004057550.1	COGs: COG1435 Thymidine kinase; InterPro IPR020633: IPR001267: IPR020634; KEGG: mrb:Mrub_1353 thymidine kinase; PFAM: thymidine kinase; PRIAM: Thymidine kinase; SPTR: Thymidine kinase; PFAM: Thymidine kinase
YP_004057551.1	COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: mrb:Mrub_1354 heat shock protein HSP20; PFAM: heat shock protein Hsp20; SPTR: Heat shock protein Hsp20; PFAM: Hsp20/alpha crystallin family
YP_004057552.1	COGs: COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase; InterPro IPR018022: IPR002627; KEGG: tth:TTC0204 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; PRIAM: tRNA isopentenyltransferase; SPTR: tRNA dimethylallyltransferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: IPP transferase; TIGRFAM: tRNA isopentenyltransferase (miaA)
YP_004057553.1	COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR011904: IPR020845: IPR000873; KEGG: ttj:TTHA1248 acetyl-CoA synthetase; PFAM: AMP-dependent synthetase and ligase; SPTR: Acetate/CoA ligase; TIGRFAM: acetate/CoA ligase; PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetate--CoA ligase
YP_004057554.1	COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: dde:Dde_0753 ferric uptake regulator family protein; PFAM: ferric-uptake regulator; SPTR: Putative ferric uptake regulator, FUR family; PFAM: Ferric uptake regulator family
YP_004057555.1	COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR003593: IPR003439; KEGG: ttj:TTHA0453 Mn2+/Zn2+ ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Mn2+/Zn2+ ABC transporter, ATP-binding protein; PFAM: ABC transporter
YP_004057556.1	COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: msv:Mesil_1590 ABC transporter; PFAM: ABC transporter; SPTR: ABC transporter; PFAM: ABC 3 transport family
YP_004057557.1	COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: ttj:TTHA0455 rrf2 family protein, transcriptional regulator; PFAM: protein of unknown function UPF0074; SPTR: Transcriptional regulator, BadM/Rrf2 family; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: Transcriptional regulator; TIGRFAM: rrf2 family protein (transcriptional regulator)
YP_004057558.1	COGs: COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; InterProIPR010121: IPR018274: IPR000121: IPR002192: IPR 008279; KEGG: tth:TTC0304 pyruvate phosphate dikinase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; PEP-utilizing protein; PRIAM: Pyruvate, phosphate dikinase; SPTR: Pyruvate, phosphate dikinase; TIGRFAM: pyruvate, phosphate dikinase; PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: pyruvate, phosphate dikinase
YP_004057559.1	KEGG: xau:Xaut_4038 ABC transporter related; SPTR: ABC transporter related
YP_004057560.1	KEGG: rmr:Rmar_1831 protein of unknown function DUF461; SPTR: Putative uncharacterized protein
YP_004057561.1	COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR020845: IPR000873; KEGG: ttj:TTHA1463 long-chain-fatty-acid--CoA ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: Long-chain-fatty-acid--CoA ligase; PFAM: AMP-binding enzyme
YP_004057562.1	COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR020845: IPR000873; KEGG: ttj:TTHA1430 long-chain fatty acid--CoA ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: Long-chain fatty acid--CoA ligase; PFAM: AMP-binding enzyme
YP_004057563.1	COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterPro IPR006176: IPR006108: IPR001753; KEGG: tth:TTC0534 enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; Enoyl-CoA hydratase/isomerase; SPTR: Enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase/3-hydroxyacyl-CoA dehydrogenase; PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
YP_004057564.1	COGs: COG0183 Acetyl-CoA acetyltransferase; InterProIPR002155: IPR020615: IPR020610: IPR020613: IPR 020616: IPR020617; KEGG: ttj:TTHA0891 acetyl-CoA acetyltransferase; PFAM: Thiolase-like; SPTR: Acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases
YP_004057565.1	COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006089: IPR006092: IPR006091: IPR006090; KEGG: ttj:TTHA0892 acyl-CoA dehydrogenase; PFAM: acyl-CoA dehydrogenase domain-containing protein; SPTR: Acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_004057566.1	COGs: COG1254 Acylphosphatase; InterPro IPR001792; KEGG: ttj:TTHA0567 acylphosphatase; PFAM: acylphosphatase; SPTR: Acylphosphatase; PFAM: Acylphosphatase
YP_004057567.1	InterPro IPR007452; KEGG: msv:Mesil_2256 protein of unknown function DUF490; PFAM: protein of unknown function DUF490; SPTR: Putative uncharacterized protein; PFAM: Family of unknown function (DUF490)
YP_004057568.1	COGs: COG0486 GTPase; InterProIPR004520: IPR005225: IPR006073: IPR018948: IPR 002917; KEGG: msv:Mesil_2254 tRNA modification GTPase TrmE; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related; SPTR: tRNA modification GTPase TrmE; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: small GTP-binding protein domain; tRNA modification GTPase TrmE
YP_004057569.1	COGs: COG0001 Glutamate-1-semialdehyde aminotransferase; InterPro IPR004639: IPR005814; KEGG: ttj:TTHA0934 glutamate-1-semialdehyde aminotransferase; PFAM: aminotransferase class-III; SPTR: Glutamate-1-semialdehyde-2,1-aminomutase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase
YP_004057570.1	InterPro IPR003010; KEGG: msv:Mesil_1984 hypothetical protein; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Putative uncharacterized protein; PFAM: Carbon-nitrogen hydrolase
YP_004057571.1	COGs: COG3634 Alkyl hydroperoxide reductase large subunit; InterPro IPR011903: IPR002109; KEGG: tth:TTC0486 glutaredoxin-like protein; SPTR: Glutaredoxin-like protein; TIGRFAM: glutaredoxin-like domain protein; TIGRFAM: Glutaredoxin-like domain protein
YP_004057572.1	COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: tth:TTC0487 transferase/hydrolase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: Rhodanese domain protein; PFAM: Rhodanese-like domain
YP_004057573.1	COGs: COG0526 Thiol-disulfide isomerase and thioredoxins; InterPro IPR017936: IPR017937: IPR013740; KEGG: ttj:TTHA0840 thiol:disulfide interchange protein; PFAM: Redoxin domain protein; SPTR: Redoxin domain protein; PFAM: Redoxin; TIGRFAM: YD repeat (two copies)
YP_004057574.1	COGs: COG0405 Gamma-glutamyltransferase; InterPro IPR000101; KEGG: tth:TTC0403 gamma-glutamyltranspeptidase; PFAM: gamma-glutamyltranspeptidase; PRIAM: Gamma-glutamyltransferase; SPTR: Gamma-glutamyltranspeptidase; PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase
YP_004057575.1	InterPro IPR006076; KEGG: mrb:Mrub_1853 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: FAD dependent oxidoreductase
YP_004057576.1	KEGG: ttj:TTHA1307 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057577.1	COGs: COG0621 2-methylthioadenine synthetase; InterProIPR005839: IPR006463: IPR006638: IPR013848: IPR 020612: IPR007197; KEGG: ttj:TTHA1308 (dimethylallyl)adenosine tRNA methylthiotransferase; PFAM: protein of unknown function UPF0004; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: (Dimethylallyl)adenosine tRNA methylthiotransferase miaB; TIGRFAM: RNA modification enzyme, MiaB family; tRNA-i(6)A37 thiotransferase enzyme MiaB; PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; RNA modification enzyme, MiaB family
YP_004057578.1	COGs: COG0058 Glucan phosphorylase; InterPro IPR011834: IPR017868: IPR000811; KEGG: msv:Mesil_2117 alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; PRIAM: Phosphorylase; SPTR: Alpha-glucan phosphorylase; TIGRFAM: alpha-glucan phosphorylase; PFAM: Carbohydrate phosphorylase; Protein of unknown function (DUF3417); TIGRFAM: alpha-glucan phosphorylases
YP_004057579.1	COGs: COG0504 CTP synthase (UTP-ammonia lyase); InterPro IPR004468: IPR017926: IPR017456: IPR000991; KEGG: tth:TTC1102 CTP synthetase; PFAM: CTP synthase-like; glutamine amidotransferase class-I; PRIAM: CTP synthase; SPTR: CTP synthase; TIGRFAM: CTP synthase; PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase
YP_004057580.1	COGs: COG2607 ATPase (AAA+ superfamily); InterPro IPR008533; KEGG: msv:Mesil_1731 protein of unknown function DUF815; PFAM: protein of unknown function DUF815; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF815)
YP_004057581.1	COGs: COG0605 Superoxide dismutase; InterPro IPR019833: IPR001189: IPR019831: IPR019832; KEGG: ttj:TTHA0557 superoxide dismutase [Mn]; PFAM: Manganese/iron superoxide dismutase-like; PRIAM: Superoxide dismutase; SPTR: Superoxide dismutase [Mn]; PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain
YP_004057582.1	COGs: COG0114 Fumarase; InterPro IPR020557: IPR000362: IPR003031: IPR018951; KEGG: pca:Pcar_0324 fumarate hydratase; PFAM: fumarate lyase; Fumarase C-like; SPTR: Fumarate hydratase; PFAM: Fumarase C C-terminus; Lyase; TIGRFAM: fumarate hydratase, class II
YP_004057583.1	COGs: COG0492 Thioredoxin reductase; InterPro IPR000103: IPR013027; KEGG: ttj:TTHA1215 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Probable thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_004057584.1	KEGG: rfr:Rfer_2853 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057585.1	InterPro IPR013543; KEGG: ttj:TTHA1247 hypothetical protein; PFAM: Calcium/calmodulin dependent protein kinase II association-domain protein; SPTR: Protein kinase-like protein; PFAM: Calcium/calmodulin dependent protein kinase II Association
YP_004057586.1	KEGG: bse:Bsel_1378 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057587.1	COGs: COG1884 Methylmalonyl-CoA mutase N-terminal domain/subunit; InterPro IPR006098: IPR006099; KEGG: ttj:TTHA1246 methylmalonyl-CoA mutase; PFAM: methylmalonyl-CoA mutase; PRIAM: Methylmalonyl-CoA mutase; SPTR: Methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: Methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain
YP_004057588.1	KEGG: msv:Mesil_1550 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057589.1	COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: msv:Mesil_1551 transcriptional regulator, HxlR family; PFAM: helix-turn-helix HxlR type; SPTR: Transcriptional regulator, HxlR family; PFAM: HxlR-like helix-turn-helix
YP_004057590.1	COGs: COG0428 divalent heavy-metal cations transporter; InterPro IPR003689; KEGG: ttj:TTHA1706 divalent heavy-metal cation transporter; PFAM: zinc/iron permease; SPTR: Zinc/iron permease; PFAM: ZIP Zinc transporter
YP_004057591.1	COGs: COG0282 Acetate kinase; InterPro IPR004372: IPR000890; KEGG: sma:SAV_2824 acetate kinase; PFAM: acetate and butyrate kinase; SPTR: Acetate kinase; TIGRFAM: acetate kinase; PFAM: Acetokinase family; TIGRFAM: acetate kinase
YP_004057592.1	COGs: COG1651 Protein-disulfide isomerase; InterPro IPR017936: IPR001853; KEGG: tth:TTC0471 thiol:disulfide interchange protein DsbA; PFAM: DSBA oxidoreductase; SPTR: Thiol:disulfide interchange protein dsbA; PFAM: DSBA-like thioredoxin domain
YP_004057593.1	KEGG: mrb:Mrub_0754 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057594.1	COGs: COG0167 Dihydroorotate dehydrogenase; InterPro IPR005720: IPR001295: IPR012135; KEGG: dae:Dtox_2350 dihydroorotate dehydrogenase 1B; PFAM: dihydroorotate oxidase; SPTR: Dihydroorotate dehydrogenase family protein; TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase (subfamily 1) family protein
YP_004057595.1	COGs: COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase; InterProIPR017927: IPR012165: IPR008333: IPR001433: IPR 019480; KEGG: ele:Elen_1664 oxidoreductase FAD/NAD(P)-binding domain protein; PFAM: Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; SPTR: Oxidoreductase FAD/NAD(P)-binding domain protein; PFAM: Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain
YP_004057596.1	COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase; InterPro IPR004722: IPR002195: IPR006680; KEGG: ttj:TTHA0781 dihydroorotase; PFAM: amidohydrolase; SPTR: Dihydroorotase; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type
YP_004057597.1	COGs: COG0540 Aspartate carbamoyltransferase catalytic chain; InterPro IPR002082: IPR006130: IPR006132: IPR006131; KEGG: ttj:TTHA0782 aspartate carbamoyltransferase catalytic subunit; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; SPTR: Aspartate carbamoyltransferase; TIGRFAM: aspartate carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase
YP_004057598.1	COGs: COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase; InterPro IPR000836; KEGG: msv:Mesil_1879 uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; PRIAM: Uracil phosphoribosyltransferase; SPTR: Uracil phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain
YP_004057599.1	KEGG: tth:TTC0429 hypothetical protein; SPTR: Hypothetical membrane spanning protein; PFAM: SPW repeat
YP_004057600.1	COGs: COG0254 Ribosomal protein L31; InterPro IPR002150; KEGG: ttj:TTHA1073 50S ribosomal protein L31; PFAM: ribosomal protein L31; SPTR: 50S ribosomal protein L31; TIGRFAM: ribosomal protein L31; PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31
YP_004057601.1	COGs: COG0480 Translation elongation factors (GTPase); InterProIPR005225: IPR000795: IPR004161: IPR005517: IPR 000640; KEGG: ttj:TTHA1498 elongation factor G; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain-containing protein; SPTR: Elongation factor G (EF-G-2); TIGRFAM: small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain
YP_004057602.1	COGs: COG1310 metal-dependent protease of the PAD1/JAB1 superfamily; KEGG: msv:Mesil_2119 Mov34/MPN/PAD-1 family protein; SPTR: Mov34/MPN/PAD-1 family protein
YP_004057603.1	COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR000594: IPR007901; KEGG: mrb:Mrub_1727 UBA/ThiF-type NAD/FAD binding protein; PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; SPTR: UBA/THIF-type NAD/FAD binding protein; manually curated; PFAM: MoeZ/MoeB domain; ThiF family
YP_004057604.1	COGs: COG0372 Citrate synthase; InterPro IPR011278: IPR002020; KEGG: msv:Mesil_1621 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase; PRIAM: Citrate (Si)-synthase; SPTR: 2-methylcitrate synthase/citrate synthase II; TIGRFAM: 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase; TIGRFAM: 2-methylcitrate synthase/citrate synthase II
YP_004057605.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR020635: IPR002290: IPR000719: IPR008271: IPR 017442; KEGG: msv:Mesil_1655 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; manually curated; PFAM: Protein kinase domain
YP_004057606.1	COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641; KEGG: tth:TTC1004 serine protease; PFAM: Patatin; SPTR: Patatin; PFAM: Patatin-like phospholipase
YP_004057607.1	InterPro IPR000223: IPR019757: IPR019759; KEGG: msv:Mesil_1657 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: Signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S26; Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type
YP_004057608.1	COGs: COG0160 4-aminobutyrate aminotransferase and related aminotransferase; InterPro IPR005814; KEGG: msv:Mesil_1796 acetylornithine transaminase; PFAM: aminotransferase class-III; PRIAM: Acetylornithine transaminase; SPTR: Acetylornithine transaminase; PFAM: Aminotransferase class-III; TIGRFAM: 4-aminobutyrate aminotransferase, prokaryotic type
YP_004057609.1	COGs: COG2894 Septum formation inhibitor-activating ATPase; InterPro IPR010223; KEGG: msv:Mesil_1552 septum site-determining protein MinD; SPTR: Septum site-determining protein MinD; TIGRFAM: septum site-determining protein MinD; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: septum site-determining protein MinD
YP_004057610.1	COGs: COG0851 Septum formation topological specificity factor; InterPro IPR005527; KEGG: ttj:TTHA1242 cell division inhibitor MinE; PFAM: Septum formation topological specificity factor MinE; SPTR: Cell division factor-like protein; TIGRFAM: cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE; TIGRFAM: cell division topological specificity factor MinE
YP_004057611.1	COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR011923: IPR018365: IPR001182; KEGG: msv:Mesil_1554 rod shape-determining protein RodA; PFAM: cell cycle protein; SPTR: Rod shape-determining protein RodA; TIGRFAM: rod shape-determining protein RodA; PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA
YP_004057612.1	COGs: COG0730 permease; InterPro IPR002781; KEGG: tth:TTC0430 permease; PFAM: protein of unknown function DUF81; SPTR: Putative permease; PFAM: Sulfite exporter TauE/SafE
YP_004057613.1	InterPro IPR006312: IPR003369; KEGG: msv:Mesil_1555 twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; SPTR: Twin-arginine translocation protein, TatA/E family subunit; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family
YP_004057614.1	COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003593: IPR003439: IPR017871: IPR013611; KEGG: ttj:TTHA0715 ABC transporter ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; SPTR: ABC transporter ATP-binding protein; PFAM: ABC transporter; TOBE domain
YP_004057615.1	COGs: COG4149 ABC-type molybdate transport system permease component; InterPro IPR011867: IPR000515; KEGG: ttj:TTHA0716 molybdenum ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Molybdenum ABC transporter permease modB; TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: molybdate ABC transporter, permease protein
YP_004057616.1	COGs: COG0725 ABC-type molybdate transport system periplasmic component; InterPro IPR005950: IPR006059; KEGG: rmr:Rmar_0056 molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: Molybdenum ABC transporter, periplasmic molybdate-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein
YP_004057617.1	InterPro IPR009056: IPR003088; KEGG: mrb:Mrub_1926 cytochrome c class I; PFAM: cytochrome c class I; SPTR: Cytochrome c class I; PFAM: Cytochrome c
YP_004057618.1	COGs: COG0687 Spermidine/putrescine-binding periplasmic protein; InterPro IPR001188: IPR006059; KEGG: tth:TTC0873 spermidine/putrescine-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: Extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding protein
YP_004057619.1	COGs: COG1177 ABC-type spermidine/putrescine transport system permease component II; InterPro IPR000515; KEGG: mrb:Mrub_1928 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004057620.1	COGs: COG1176 ABC-type spermidine/putrescine transport system permease component I; InterPro IPR000515: IPR022272; KEGG: msv:Mesil_1568 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004057621.1	COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterProIPR005893: IPR003593: IPR003439: IPR017871: IPR 013611; KEGG: msv:Mesil_R0028 spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; SPTR: Spermidine/putrescine ABC transporter ATPase subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter; TOBE domain; TIGRFAM: spermidine/putrescine ABC transporter ATP-binding subunit
YP_004057622.1	KEGG: msv:Mesil_1664 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057623.1	KEGG: msv:Mesil_1665 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057624.1	COGs: COG0817 Holliday junction resolvasome endonuclease subunit; InterPro IPR002176; KEGG: msv:Mesil_1666 crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC; PRIAM: Crossover junction endodeoxyribonuclease; SPTR: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC
YP_004057625.1	COGs: COG0217 conserved hypothetical protein; InterPro IPR002876; KEGG: msv:Mesil_1645 protein of unknown function DUF28; PFAM: protein of unknown function DUF28; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family
YP_004057626.1	COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase; InterPro IPR002328: IPR013154: IPR013149; KEGG: tth:TTC0201 L-threonine 3-dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; SPTR: L-threonine 3-dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase; L-threonine 3-dehydrogenase
YP_004057627.1	COGs: COG1040 amidophosphoribosyltransferase; KEGG: msv:Mesil_1648 phosphoribosyltransferase; SPTR: Phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein
YP_004057628.1	KEGG: ttj:TTHA1293 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057629.1	COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: tth:TTC0152 hypothetical protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: Hypothetical conserved protein; PFAM: Rhodanese-like domain
YP_004057630.1	KEGG: tth:TTC0153 hypothetical protein; SPTR: Hypothetical membrane spanning protein
YP_004057631.1	COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR017896: IPR017900; KEGG: tth:TTC0154 NrfC protein; SPTR: NrfC protein
YP_004057632.1	COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterProIPR006311: IPR017909: IPR006963: IPR006656: IPR 006657; KEGG: tth:TTC0155 thiosulfate reductase precursor; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; SPTR: Thiosulfate reductase; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_004057633.1	COGs: COG3381 Uncharacterized component of anaerobic dehydrogenase; KEGG: tth:TTC0156 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Nitrate reductase delta subunit; TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone
YP_004057634.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789: IPR000792; KEGG: tth:TTC0157 two-component response regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: Probable two-component response regulator; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_004057635.1	COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594: IPR005467: IPR011712; KEGG: tth:TTC0158 two-component sensor; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein; SPTR: Probable two-component sensor; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_004057636.1	COGs: COG0196 FAD synthase; InterPro IPR004821: IPR002606: IPR015864: IPR015865; KEGG: ttj:TTHA0527 riboflavin kinase/FMN adenylyltransferase; PFAM: Riboflavin kinase; FAD synthetase; SPTR: Riboflavin kinase/FMN adenylyltransferase; TIGRFAM: riboflavin biosynthesis protein RibF; cytidyltransferase-related domain protein; PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; cytidyltransferase-related domain
YP_004057637.1	InterPro IPR000086; KEGG: mrb:Mrub_0995 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: NUDIX hydrolase; PFAM: NUDIX domain
YP_004057638.1	COGs: COG1574 metal-dependent hydrolase with the TIM-barrel fold; InterPro IPR013108; KEGG: msv:Mesil_1652 amidohydrolase 3; PFAM: Amidohydrolase 3; SPTR: Amidohydrolase 3; PFAM: Amidohydrolase family
YP_004057639.1	COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160: IPR003018; KEGG: tth:TTC0627 hypothetical protein; PFAM: GGDEF domain containing protein; GAF domain protein; SMART: GGDEF domain containing protein; GAF domain protein; SPTR: Hypothetical conserved protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_004057640.1	COGs: COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster; InterProIPR014001: IPR001650: IPR014021: IPR011545: IPR 018973; KEGG: mrb:Mrub_1732 DEAD/DEAH box helicase domain-containing protein; PFAM: Protein of unknown function DUF1998; DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: DEAD/DEAH box helicase domain protein; PFAM: Helicase conserved C-terminal domain; Domain of unknown function (DUF1998); DEAD/DEAH box helicase
YP_004057641.1	COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR000808: IPR002744: IPR019591; KEGG: chl:Chy400_1290 protein of unknown function DUF59; PFAM: ATPase-like, ParA/MinD; protein of unknown function DUF59; SPTR: MrP protein; PFAM: ParA/MinD ATPase like; Domain of unknown function DUF59; 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
YP_004057642.1	COGs: COG2348 Uncharacterized protein involved in methicillin resistance; InterPro IPR003447; KEGG: msv:Mesil_2093 methicillin resistance protein; PFAM: Methicillin resistance protein; SPTR: Methicillin resistance protein; PFAM: FemAB family
YP_004057643.1	COGs: COG0632 Holliday junction resolvasome DNA-binding subunit; InterPro IPR000085: IPR003583: IPR013849: IPR011114; KEGG: msv:Mesil_1706 Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein; SPTR: Holliday junction DNA helicase RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit
YP_004057644.1	COGs: COG0077 Prephenate dehydratase; InterPro IPR001086: IPR018528: IPR002912; KEGG: ttj:TTHA1104 prephenate dehydratase; PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; PRIAM: Prephenate dehydratase; SPTR: Prephenate dehydratase; PFAM: Prephenate dehydratase; ACT domain
YP_004057645.1	COGs: COG1351 alternative thymidylate synthase; InterPro IPR003669; KEGG: tth:TTC0731 FAD-dependent thymidylate synthase; PFAM: thymidylate synthase complementing protein ThyX; SPTR: Thymidylate synthase thyX; TIGRFAM: thymidylate synthase, flavin-dependent; PFAM: Thymidylate synthase complementing protein; TIGRFAM: thymidylate synthase, flavin-dependent
YP_004057646.1	KEGG: msv:Mesil_2172 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3234)
YP_004057647.1	COGs: COG3360 conserved hypothetical protein; InterPro IPR009923; KEGG: ttj:TTHA1431 hypothetical protein; PFAM: protein of unknown function DUF1458; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1458)
YP_004057648.1	COGs: COG0136 Aspartate-semialdehyde dehydrogenase; InterPro IPR005986: IPR012080: IPR000534: IPR012280; KEGG: tth:TTC0177 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding; PRIAM: Aspartate-semialdehyde dehydrogenase; SPTR: Aspartate-semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)
YP_004057649.1	COGs: COG0751 Glycyl-tRNA synthetase beta subunit; InterPro IPR015944: IPR006194: IPR002311: IPR008909; KEGG: tra:Trad_2214 glycyl-tRNA synthetase, beta subunit; PFAM: glycyl-tRNA synthetase beta subunit; DALR anticodon binding domain protein; PRIAM: Glycine--tRNA ligase; SPTR: Glycyl-tRNA synthetase, beta subunit; TIGRFAM: glycyl-tRNA synthetase, beta subunit; PFAM: Glycyl-tRNA synthetase beta subunit; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, beta subunit
YP_004057650.1	COGs: COG0752 Glycyl-tRNA synthetase alpha subunit; InterPro IPR002310: IPR006194; KEGG: tra:Trad_2215 glycyl-tRNA synthetase, alpha subunit; PFAM: glycyl-tRNA synthetase alpha subunit; PRIAM: Glycine--tRNA ligase; SPTR: Glycyl-tRNA synthetase, alpha subunit; TIGRFAM: glycyl-tRNA synthetase, alpha subunit; PFAM: Glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, alpha subunit
YP_004057651.1	COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR003593: IPR018368: IPR001270: IPR004176: IPR 003959: IPR013093: IPR019489; KEGG: msv:Mesil_2175 ATPase AAA-2 domain protein; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; Clp ATPase-like; SMART: AAA ATPase; SPTR: ATPase AAA-2 domain protein; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA)
YP_004057652.1	COGs: COG1066 ATP-dependent serine protease; InterPro IPR004504: IPR003593; KEGG: tth:TTC0173 DNA repair protein RadA; SMART: AAA ATPase; SPTR: DNA repair protein radA; TIGRFAM: DNA repair protein RadA; PFAM: KaiC; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: DNA repair protein RadA
YP_004057653.1	COGs: COG4956 Integral membrane protein (PIN domain superfamily); InterPro IPR002792: IPR002716; KEGG: mrb:Mrub_1657 PilT domain-containing protein; PFAM: PilT protein domain protein; deoxyribonuclease/rho motif-related TRAM; SPTR: PilT protein domain protein
YP_004057654.1	KEGG: tra:Trad_1790 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057655.1	InterPro IPR007168; KEGG: ton:TON_1287 transcription regulator; PFAM: PspC domain protein; SPTR: Transcription regulator, PspC family; PFAM: PspC domain
YP_004057656.1	COGs: COG0045 Succinyl-CoA synthetase beta subunit; InterProIPR005809: IPR011761: IPR017866: IPR013650: IPR 005811; KEGG: ttj:TTHA0538 succinyl-CoA synthetase subunit beta; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase; PRIAM: Succinate--CoA ligase (ADP-forming); SPTR: Succinyl-CoA ligase [ADP-forming] subunit beta; TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: CoA-ligase; ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase, beta subunit
YP_004057657.1	COGs: COG0074 Succinyl-CoA synthetase alpha subunit; InterPro IPR005810: IPR017440: IPR003781: IPR005811; KEGG: ttj:TTHA0537 succinyl-CoA synthetase alpha chain; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; SPTR: Succinyl-CoA ligase [ADP-forming] subunit alpha; TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA binding domain; CoA-ligase; TIGRFAM: succinyl-CoA synthetase, alpha subunit
YP_004057658.1	KEGG: tth:TTC0212 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057659.1	COGs: COG4102 conserved hypothetical protein; InterPro IPR006311: IPR017909: IPR010869; KEGG: mrb:Mrub_2448 hypothetical protein; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501)
YP_004057660.1	COGs: COG5267 conserved hypothetical protein; InterPro IPR014917; KEGG: mrb:Mrub_2447 hypothetical protein; PFAM: protein of unknown function DUF1800; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1800)
YP_004057661.1	COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR003593: IPR002543: IPR018541; KEGG: msv:Mesil_1861 cell division protein FtsK/SpoIIIE; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: AAA ATPase; SPTR: Cell division protein FtsK/SpoIIIE; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family
YP_004057662.1	InterPro IPR005632; KEGG: mrb:Mrub_1290 outer membrane chaperone Skp (OmpH); PFAM: outer membrane chaperone Skp (OmpH); SPTR: Outer membrane chaperone Skp (OmpH); PFAM: Outer membrane protein (OmpH-like)
YP_004057663.1	COGs: COG2524 transcriptional regulator protein; InterPro IPR000644; KEGG: msv:Mesil_2097 CBS domain containing protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; SPTR: CBS domain containing protein; PFAM: CBS domain
YP_004057664.1	COGs: COG0662 Mannose-6-phosphate isomerase; InterPro IPR013096; KEGG: bcz:BCZK2699 hypothetical protein; PFAM: Cupin 2 conserved barrel domain protein; SPTR: Putative uncharacterized protein; PFAM: Cupin domain
YP_004057665.1	COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484: IPR018485; KEGG: rcp:RCAP_rcc02884 FGGY family carbohydrate kinase; PFAM: Carbohydrate kinase, FGGY-like; SPTR: Carbohydrate kinase, FGGY family; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain
YP_004057666.1	COGs: COG1879 ABC-type sugar transport system periplasmic component; KEGG: rcp:RCAP_rcc02877 monosacharide ABC transporter periplasmic monosacharide-binding protein; SPTR: Putative uncharacterized protein
YP_004057667.1	COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: rcp:RCAP_rcc02878 monosacharide ABC transporter permease; PFAM: inner-membrane translocator; SPTR: Monosaccharide-transporting ATPase; PFAM: Branched-chain amino acid transport system / permease component
YP_004057668.1	COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: rcp:RCAP_rcc02879 monosacharide ABC transporter permease; PFAM: inner-membrane translocator; SPTR: Monosaccharide-transporting ATPase; PFAM: Branched-chain amino acid transport system / permease component
YP_004057669.1	COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003593: IPR003439: IPR017871; KEGG: rcp:RCAP_rcc02880 monosacharide ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Monosacharide ABC transporter, ATP-binding protein; PFAM: ABC transporter
YP_004057670.1	COGs: COG2390 Transcriptional regulator contains sigma factor-related N-terminal domain; InterPro IPR007630: IPR007324; KEGG: chl:Chy400_1458 transcriptional regulator, DeoR family; PFAM: sugar-binding domain-containing protein; sigma-70 region 4 domain protein; SPTR: Transcriptional regulator, DeoR family; PFAM: Sigma-70, region 4; Putative sugar-binding domain
YP_004057671.1	KEGG: mrb:Mrub_1667 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057672.1	KEGG: ttj:TTHA1101 hypothetical protein; SPTR: Putative uncharacterized protein TTHA1101; PFAM: OstA-like protein
YP_004057673.1	KEGG: mrb:Mrub_1665 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057674.1	KEGG: mrb:Mrub_1493 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057675.1	COGs: COG0782 Transcription elongation factor; InterPro IPR018151: IPR001437; KEGG: tth:TTC0680 anti-cleavage anti-GreA transcription factor gfh1; PFAM: transcription elongation factor GreA/GreB domain-containing protein; SPTR: Anti-cleavage anti-GreA transcription factor Gfh1; PFAM: domain; Transcription elongation factor, GreA/GreB, C-term
YP_004057676.1	COGs: COG1190 Lysyl-tRNA synthetase (class II); InterProIPR002313: IPR006195: IPR018149: IPR004365: IPR 004364; KEGG: ttj:TTHA1041 lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; SPTR: Lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial
YP_004057677.1	KEGG: coc:Coch_1597 peptidoglycan glycosyltransferase; SPTR: Peptidoglycan glycosyltransferase
YP_004057678.1	COGs: COG1760 L-serine deaminase; InterPro IPR004642: IPR005130; KEGG: ttj:TTHA1029 L-serine dehydratase, alpha subunit; PFAM: serine dehydratase alpha chain; PRIAM: L-serine ammonia-lyase; SPTR: L-serine dehydratase, alpha subunit; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, alpha subunit; PFAM: Serine dehydratase alpha chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, alpha subunit
YP_004057679.1	COGs: COG1232 Protoporphyrinogen oxidase; InterPro IPR004572: IPR002937; KEGG: msv:Mesil_2992 protoporphyrinogen oxidase; PFAM: amine oxidase; PRIAM: Protoporphyrinogen oxidase; SPTR: Protoporphyrinogen oxidase; TIGRFAM: protoporphyrinogen oxidase; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: protoporphyrinogen oxidase
YP_004057680.1	COGs: COG0276 Protoheme ferro-lyase (ferrochelatase); InterPro IPR001015; KEGG: msv:Mesil_2991 ferrochelatase; PFAM: ferrochelatase; SPTR: Ferrochelatase; TIGRFAM: ferrochelatase; PFAM: Ferrochelatase; TIGRFAM: ferrochelatase
YP_004057681.1	COGs: COG0407 Uroporphyrinogen-III decarboxylase; InterPro IPR006361: IPR000257; KEGG: ttj:TTHA0601 uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); PRIAM: Uroporphyrinogen decarboxylase; SPTR: Uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: uroporphyrinogen decarboxylase
YP_004057682.1	COGs: COG0169 Shikimate 5-dehydrogenase; InterPro IPR011342: IPR013708: IPR006151; KEGG: mrb:Mrub_1819 shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; SPTR: Shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase
YP_004057683.1	COGs: COG4843 conserved hypothetical protein; InterPro IPR019264; KEGG: mem:Memar_1511 hypothetical protein; PFAM: Protein of unknown function DUF2179; SPTR: UPF0316 protein Memar_1511; PFAM: Uncharacterized protein conserved in bacteria (DUF2179)
YP_004057684.1	COGs: COG1739 conserved hypothetical protein; InterPro IPR020569: IPR001498; KEGG: msv:Mesil_2225 protein of unknown function UPF0029; PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein family UPF0029; TIGRFAM: uncharacterized protein, YigZ family
YP_004057685.1	COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterProIPR018320: IPR002421: IPR008918: IPR001098: IPR 019760: IPR002298: IPR020046: IPR020047: IPR015361; KEGG: msv:Mesil_2224 DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; Taq polymerase thermostable exonuclease region; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; DNA-directed DNA polymerase; SPTR: DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: Taq polymerase, exonuclease; 5'-3' exonuclease, C-terminal SAM fold; DNA polymerase family A; 5'-3' exonuclease, N-terminal resolvase-like domain; TIGRFAM: DNA polymerase I
YP_004057686.1	COGs: COG1109 Phosphomannomutase; InterProIPR006352: IPR016066: IPR005841: IPR005844: IPR 005845: IPR005846: IPR005843; KEGG: msv:Mesil_2223 phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; SPTR: Phosphoglucosamine mutase; TIGRFAM: phosphoglucosamine mutase; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase
YP_004057687.1	COGs: COG0858 Ribosome-binding factor A; InterPro IPR000238; KEGG: msv:Mesil_2222 ribosome-binding factor A; PFAM: ribosome-binding factor A; SPTR: Ribosome-binding factor A; PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A
YP_004057688.1	COGs: COG0824 thioesterase; InterPro IPR006684: IPR006683; KEGG: tra:Trad_1382 thioesterase superfamily protein; PFAM: thioesterase superfamily protein; SPTR: Thioesterase superfamily protein; PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family
YP_004057689.1	COGs: COG4992 Ornithine/acetylornithine aminotransferase; InterPro IPR005814; KEGG: tth:TTC0553 ornithine aminotransferase; PFAM: aminotransferase class-III; PRIAM: Acetylornithine transaminase; SPTR: Ornithine aminotransferase; PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine aminotransferases
YP_004057690.1	COGs: COG0557 Exoribonuclease R; InterProIPR011805: IPR004476: IPR011129: IPR003029: IPR 001900: IPR013223; KEGG: msv:Mesil_2219 ribonuclease R; PFAM: ribonuclease II; Ribonuclease B OB region domain; RNA binding S1 domain protein; SMART: Cold shock protein; SPTR: Ribonuclease R; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; PFAM: Ribonuclease B OB domain; RNB domain; S1 RNA binding domain; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonucleases
YP_004057691.1	COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR002880: IPR019752; KEGG: mgm:Mmc1_1741 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; SPTR: Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; PFAM: domain; Pyruvate ferredoxin/flavodoxin oxidoreductase
YP_004057692.1	COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit; InterPro IPR017896: IPR017900: IPR011766; KEGG: mgm:Mmc1_1742 thiamine pyrophosphate binding domain-containing protein; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; SPTR: Thiamine pyrophosphate enzyme domain protein TPP-binding; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
YP_004057693.1	COGs: COG0685 5 10-methylenetetrahydrofolate reductase; InterPro IPR003171; KEGG: bts:Btus_0625 methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; SPTR: Methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase
YP_004057694.1	COGs: COG1490 D-Tyr-tRNAtyr deacylase; InterPro IPR003732; KEGG: ttj:TTHA0949 D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase; SPTR: D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase
YP_004057695.1	COGs: COG1307 conserved hypothetical protein; InterPro IPR003797; KEGG: tth:TTC0585 DegV protein; PFAM: DegV family protein; SPTR: DegV protein; TIGRFAM: degV family protein; PFAM: Uncharacterised protein, DegV family COG1307; TIGRFAM: EDD domain protein, DegV family
YP_004057696.1	COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006236: IPR006140: IPR006139: IPR002912; KEGG: ttj:TTHA0952 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein; SPTR: D-3-phosphoglycerate dehydrogenase; TIGRFAM: D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; ACT domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; TIGRFAM: D-3-phosphoglycerate dehydrogenase
YP_004057697.1	COGs: COG0075 Serine-pyruvate aminotransferase/ aspartate aminotransferase; InterPro IPR020578: IPR000192; KEGG: mrb:Mrub_0174 aminotransferase class V; PFAM: aminotransferase class V; SPTR: Aminotransferase class V; PFAM: Aminotransferase class-V
YP_004057698.1	COGs: COG4475 conserved hypothetical protein; InterPro IPR006340; KEGG: tth:TTC0214 hypothetical protein; PFAM: Conserved hypothetical protein CHP01440; SPTR: UPF0340 protein TT_C0214; PFAM: Protein of unknown function (DUF436); TIGRFAM: conserved hypothetical protein TIGR01440
YP_004057699.1	COGs: COG4401 Chorismate mutase; InterPro IPR008243; KEGG: ttj:TTHA0868 chorismate mutase; PFAM: Chorismate mutase of the AroH class; SPTR: Chorismate mutase; TIGRFAM: chorismate mutase; PFAM: Chorismate mutase type I; TIGRFAM: monofunctional chorismate mutase, gram positive type, clade 1
YP_004057700.1	COGs: COG0038 Chloride channel protein EriC; InterPro IPR001807: IPR006037; KEGG: msv:Mesil_1824 Cl-channel voltage-gated family protein; PFAM: Cl- channel voltage-gated family protein; TrkA-C domain protein; SPTR: Cl-channel voltage-gated family protein; PFAM: Voltage gated chloride channel
YP_004057701.1	COGs: COG0402 Cytosine deaminase and related metal-dependent hydrolase; InterPro IPR006680; KEGG: ttj:TTHA0872 amidohydrolase family protein; PFAM: amidohydrolase; SPTR: Amidohydrolase family protein; PFAM: Amidohydrolase family
YP_004057702.1	COGs: COG1060 Thiamine biosynthesis protein ThiH; InterPro IPR020050: IPR005244: IPR007197; KEGG: tth:TTC0727 biotin synthase/thiamine biosynthesis enzyme; PFAM: Radical SAM domain protein; SPTR: Biotin synthase/thiamine biosynthesis enzyme; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM domain protein, CofH subfamily; menaquinone biosynthesis protein, SCO4550 family
YP_004057703.1	COGs: COG1839 conserved hypothetical protein; InterPro IPR007153; KEGG: ttj:TTHA1091 hypothetical protein; PFAM: protein of unknown function DUF355; SPTR: Putative uncharacterized protein TTHA1091; PFAM: Adenosine specific kinase
YP_004057704.1	COGs: COG1225 Peroxiredoxin; InterPro IPR017936: IPR000866; KEGG: tth:TTC0933 bacterioferritin comigratory protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: AhpC/TSA family
YP_004057705.1	COGs: COG0120 Ribose 5-phosphate isomerase; InterPro IPR004788: IPR020672; KEGG: tth:TTC0932 ribose-5-phosphate isomerase A; PFAM: Ribose 5-phosphate isomerase; PRIAM: Ribose-5-phosphate isomerase; SPTR: Ribose-5-phosphate isomerase A; TIGRFAM: ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase A (phosphoriboisomerase A); TIGRFAM: ribose 5-phosphate isomerase
YP_004057706.1	KEGG: gob:Gobs_4599 transcriptional regulator, AraC family; SPTR: Putative uncharacterized protein
YP_004057707.1	KEGG: gla:GL50803_9752 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057708.1	COGs: COG1393 Arsenate reductase and related protein glutaredoxin family; InterPro IPR006660; KEGG: xfm:Xfasm12_0094 hypothetical protein; PFAM: arsenate reductase and related; SPTR: Putative uncharacterized protein; PFAM: ArsC family; TIGRFAM: transcriptional regulator, Spx/MgsR family
YP_004057709.1	COGs: COG4555 ABC-type Na+ transport system ATPase component; InterPro IPR003593: IPR003439: IPR017871; KEGG: ttj:TTHA1924 sodium ABC transporter, ATP-binding protein NatA; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter
YP_004057710.1	COGs: COG1668 ABC-type Na+ efflux pump permease component; InterPro IPR013525; KEGG: mrb:Mrub_1790 sodium ABC transporter permease protein; PFAM: ABC transporter; SPTR: Putative sodium ABC transporter, permease protein
YP_004057711.1	COGs: COG0143 Methionyl-tRNA synthetase; InterProIPR002304: IPR004495: IPR002547: IPR014758: IPR 015413; KEGG: tth:TTC0931 methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); t-RNA-binding domain-containing protein; SPTR: Methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetases class I (M); Putative tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; methionyl-tRNA synthetase
YP_004057712.1	COGs: COG1355 dioxygenase; InterPro IPR002737; KEGG: tth:TTC0555 hypothetical protein; PFAM: protein of unknown function DUF52; SPTR: Putative uncharacterized protein; PFAM: Memo-like protein
YP_004057713.1	COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR006675: IPR002646: IPR006674; KEGG: msv:Mesil_2216 polynucleotide adenylyltransferase/metal dependent phosphohydrolase; PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; SPTR: Polynucleotide adenylyltransferase/metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: HD domain; Poly A polymerase head domain; TIGRFAM: uncharacterized domain HDIG
YP_004057714.1	COGs: COG0237 Dephospho-CoA kinase; InterPro IPR001977; KEGG: msv:Mesil_2215 dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; PRIAM: Dephospho-CoA kinase; SPTR: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase
YP_004057715.1	COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: mrb:Mrub_1584 periplasmic binding protein; PFAM: periplasmic binding protein; SPTR: Periplasmic binding protein; PFAM: Periplasmic binding protein
YP_004057716.1	COGs: COG0345 Pyrroline-5-carboxylate reductase; InterPro IPR000304: IPR004455; KEGG: msv:Mesil_1809 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; PRIAM: Pyrroline-5-carboxylate reductase; SPTR: Pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase
YP_004057717.1	KEGG: msv:Mesil_1810 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057718.1	COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: ttj:TTHA0854 glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2
YP_004057719.1	COGs: COG0750 membrane-associated Zn-dependent protease 1; InterPro IPR004387: IPR001478: IPR008915; KEGG: ttj:TTHA0855 membrane-associated Zn-dependent protease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein; SPTR: Peptidase M50; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP
YP_004057720.1	COGs: COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro IPR003821: IPR013512: IPR013644; KEGG: mrb:Mrub_1785 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain-containing protein; PRIAM: 1-deoxy-D-xylulose-5-phosphate reductoisomerase; SPTR: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase
YP_004057721.1	COGs: COG0575 CDP-diglyceride synthetase; InterPro IPR000374; KEGG: msv:Mesil_1962 phosphatidate cytidylyltransferase; PFAM: phosphatidate cytidylyltransferase; SPTR: Phosphatidate cytidylyltransferase; PFAM: Cytidylyltransferase family
YP_004057722.1	COGs: COG0020 Undecaprenyl pyrophosphate synthase; InterPro IPR001441: IPR018520; KEGG: bts:Btus_1529 undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; PRIAM: Di-trans,poly-cis-decaprenylcistransferase; SPTR: Undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase
YP_004057723.1	COGs: COG0233 Ribosome recycling factor; InterPro IPR002661: IPR015998; KEGG: msv:Mesil_1963 ribosome recycling factor; PFAM: ribosome recycling factor; SPTR: Ribosome-recycling factor; TIGRFAM: ribosome recycling factor; PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor
YP_004057724.1	COGs: COG0528 Uridylate kinase; InterPro IPR015963: IPR011817: IPR001048; KEGG: ttj:TTHA0859 uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; SPTR: Uridylate kinase; TIGRFAM: uridylate kinase; PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase
YP_004057725.1	COGs: COG0264 Translation elongation factor Ts; InterPro IPR001816: IPR018101: IPR000449: IPR014039; KEGG: ttj:TTHA0860 elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein; SPTR: Elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts
YP_004057726.1	COGs: COG0052 Ribosomal protein S2; InterPro IPR005706: IPR018130: IPR001865; KEGG: msv:Mesil_1966 ribosomal protein S2; PFAM: ribosomal protein S2; SPTR: Ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type
YP_004057727.1	COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterProIPR006443: IPR006655: IPR006963: IPR006656: IPR 006657; KEGG: dal:Dalk_1854 formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; SPTR: Formate dehydrogenase, alpha subunit; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, proteobacterial-type
YP_004057728.1	COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR017896: IPR017900; KEGG: tjr:TherJR_0771 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S binding domain; TIGRFAM: formate dehydrogenase, beta subunit, Fe-S containing
YP_004057729.1	COGs: COG3301 Formate-dependent nitrite reductase membrane component; InterPro IPR005614; KEGG: ttr:Tter_0610 polysulphide reductase NrfD; PFAM: Polysulphide reductase NrfD; SPTR: Polysulphide reductase NrfD; PFAM: Polysulphide reductase, NrfD
YP_004057730.1	InterPro IPR006452; KEGG: gur:Gura_3371 hypothetical protein; PFAM: formate dehydrogenase accessory protein; SPTR: Uncharacterized protein involved in formate dehydrogenase formation-like protein; PFAM: Protein involved in formate dehydrogenase formation
YP_004057731.1	COGs: COG1526 Uncharacterized protein required for formate dehydrogenase activity; InterPro IPR003786; KEGG: gur:Gura_3385 formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; SPTR: Formate dehydrogenase family accessory protein FdhD; PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase family accessory protein FdhD
YP_004057732.1	COGs: COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: msv:Mesil_2702 molybdopterin-guanine dinucleotide biosynthesis protein A; SPTR: Molybdopterin-guanine dinucleotide biosynthesis protein A
YP_004057733.1	COGs: COG0133 Tryptophan synthase beta chain; InterPro IPR006654: IPR006653: IPR001926; KEGG: ttj:TTHA1095 tryptophan synthase subunit beta; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Tryptophan synthase, beta subunit; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit
YP_004057734.1	COGs: COG0159 Tryptophan synthase alpha chain; InterPro IPR002028: IPR018204; KEGG: ttj:TTHA1094 tryptophan synthase subunit alpha; PFAM: tryptophan synthase alpha chain; SPTR: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit; PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit
YP_004057735.1	KEGG: msv:Mesil_1841 beta-lactamase domain protein; SPTR: Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily
YP_004057736.1	KEGG: rsk:RSKD131_1581 photosynthetic reaction center subunit M; SPTR: Reaction center protein M chain PufM
YP_004057737.1	COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR010197: IPR013341: IPR013342; KEGG: dra:DR_0044 N-acylamino acid racemase; PFAM: Mandelate racemase/muconate lactonizing protein; SPTR: N-acylamino acid racemase; TIGRFAM: o-succinylbenzoic acid (OSB) synthetase; PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; TIGRFAM: o-succinylbenzoic acid (OSB) synthetase
YP_004057738.1	COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR004681: IPR010656; KEGG: ddf:DEFDS_0772 C4-dicarboxylate transporter large subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: C4-dicarboxylate transporter, large subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit
YP_004057739.1	InterPro IPR007387; KEGG: drt:Dret_0558 tripartite ATP-independent periplasmic transporter DctQ component; PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; SPTR: Tripartite ATP-independent periplasmic transporter DctQ component; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component
YP_004057740.1	COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389; KEGG: dsa:Desal_3221 TRAP dicarboxylate transporter-DctP subunit; PFAM: Extracellular solute-binding protein, family 7; SPTR: TRAP dicarboxylate transporter-DctP subunit; PFAM: Bacterial extracellular solute-binding protein, family 7
YP_004057741.1	COGs: COG1540 conserved hypothetical protein; InterPro IPR005501; KEGG: mrb:Mrub_2074 LamB/YcsF family protein; PFAM: LamB/YcsF family protein; SPTR: LamB/YcsF family protein; PFAM: LamB/YcsF family
YP_004057742.1	COGs: COG1984 Allophanate hydrolase subunit 2; InterPro IPR010016: IPR003833: IPR003778; KEGG: tra:Trad_1527 allophanate hydrolase subunit 2; PFAM: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; Allophanate hydrolase subunit 2; SPTR: Allophanate hydrolase subunit 2; PFAM: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; TIGRFAM: conserved hypothetical protein TIGR00370; biotin-dependent carboxylase uncharacterized domain
YP_004057743.1	COGs: COG0648 Endonuclease IV; InterPro IPR001719: IPR018246: IPR012307; KEGG: ttj:TTHA0834 endonuclease IV; PFAM: Xylose isomerase domain-containing protein TIM barrel; PRIAM: Deoxyribonuclease IV (phage-T(4)-induced); SMART: AP endonuclease family 2; SPTR: Endonuclease IV; TIGRFAM: apurinic endonuclease Apn1; PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: apurinic endonuclease (APN1)
YP_004057744.1	COGs: COG0797 Lipoprotein; InterPro IPR012997: IPR002482: IPR018392: IPR005132; KEGG: msv:Mesil_2034 rare lipoprotein A; PFAM: Rare lipoprotein A; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: Rare lipoprotein A; TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; LysM domain; TIGRFAM: rare lipoprotein A
YP_004057745.1	COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR001131: IPR001714: IPR000587: IPR000994; KEGG: tth:TTC0703 xaa-pro aminopeptidase; PFAM: peptidase M24; creatinase; SPTR: Peptidase M24; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain
YP_004057746.1	COGs: COG0017 Aspartyl/asparaginyl-tRNA synthetase; InterProIPR004522: IPR006195: IPR002312: IPR004365: IPR 004364; KEGG: ttj:TTHA0708 asparaginyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; SPTR: Asparaginyl-tRNA synthetase; TIGRFAM: asparaginyl-tRNA synthetase; PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: asparaginyl-tRNA synthetase
YP_004057747.1	KEGG: bcv:Bcav_1117 binding-protein-dependent transport systems inner membrane component; SPTR: Secretion protein snm4
YP_004057748.1	COGs: COG1476 transcriptional regulator protein; InterPro IPR001387; KEGG: nar:Saro_0207 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Transcriptional regulator, XRE family; PFAM: Helix-turn-helix
YP_004057749.1	KEGG: lif:LinJ10.1240 hypothetical protein
YP_004057750.1	InterPro IPR007272; KEGG: dge:Dgeo_2678 protein of unknown function DUF395, YeeE/YedE; PFAM: protein of unknown function DUF395 YeeE/YedE; SPTR: Putative uncharacterized protein; PFAM: YeeE/YedE family (DUF395)
YP_004057751.1	InterPro IPR007272; KEGG: zpr:ZPR_1822 YeeE/YedE family protein; PFAM: protein of unknown function DUF395 YeeE/YedE; SPTR: YeeE/YedE family protein; PFAM: YeeE/YedE family (DUF395)
YP_004057752.1	COGs: COG0561 hydrolase of the HAD superfamily; InterPro IPR006379: IPR013200; KEGG: msv:Mesil_2044 Cof-like hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; SPTR: Cof-like hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB
YP_004057753.1	COGs: COG0561 hydrolase of the HAD superfamily; InterPro IPR000150: IPR013200; KEGG: msv:Mesil_2045 HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; SPTR: HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB
YP_004057754.1	COGs: COG0384 epimerase PhzC/PhzF homolog; InterPro IPR003719; KEGG: msv:Mesil_2046 phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; SPTR: Phenazine biosynthesis protein PhzF family; TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis-like protein; TIGRFAM: phenazine biosynthesis protein PhzF family
YP_004057755.1	COGs: COG0173 Aspartyl-tRNA synthetase; InterProIPR004524: IPR006195: IPR002312: IPR004365: IPR 004364: IPR004115; KEGG: ttj:TTHA0711 aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; GAD domain protein; SPTR: Aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type
YP_004057756.1	COGs: COG0124 Histidyl-tRNA synthetase; InterProIPR015807: IPR006195: IPR004516: IPR002314: IPR 004154; KEGG: ttj:TTHA0712 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; PRIAM: Histidine--tRNA ligase; SPTR: Histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase
YP_004057757.1	COGs: COG3374 membrane protein; InterPro IPR009324; KEGG: tro:trd_1550 hypothetical protein; PFAM: protein of unknown function DUF981; SPTR: Putative membrane protein; PFAM: Protein of unknown function (DUF981)
YP_004057758.1	COGs: COG4974 Site-specific recombinase XerD; InterPro IPR004107: IPR002104; KEGG: msv:Mesil_2052 integrase family protein; PFAM: integrase family protein; integrase domain protein SAM domain protein; SPTR: Integrase family protein; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family
YP_004057759.1	COGs: COG2315 conserved hypothetical protein; KEGG: chu:CHU_2412 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF419)
YP_004057760.1	COGs: COG0387 Ca2+/H+ antiporter; InterPro IPR004798: IPR004837; KEGG: mrb:Mrub_0486 calcium/proton antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; SPTR: Calcium/proton antiporter, CaCA family; TIGRFAM: calcium/proton antiporter, CaCA family; PFAM: Sodium/calcium exchanger protein; TIGRFAM: calcium/proton exchanger; calcium/proton exchanger (cax)
YP_004057761.1	COGs: COG1196 Chromosome segregation ATPase; InterPro IPR003395: IPR010935; KEGG: msv:Mesil_2051 SMC domain protein; PFAM: SMC domain protein; SMCs flexible hinge domain-containing protein; SPTR: SMC domain protein; PFAM: RecF/RecN/SMC N terminal domain; SMC proteins Flexible Hinge Domain
YP_004057762.1	KEGG: isc:IscW_ISCW010553 XTP3-transactivated protein A protein, putative; SPTR: XTP3-transactivated protein A protein, putative; PFAM: MazG nucleotide pyrophosphohydrolase domain
YP_004057763.1	InterPro IPR019606; KEGG: msv:Mesil_2050 lipoprotein LpqB, GerMN domain protein; PFAM: Lipoprotein LpqB, GerMN domain; SPTR: Lipoprotein LpqB, GerMN domain protein; PFAM: Sporulation and spore germination
YP_004057764.1	COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: mrb:Mrub_1549 cell wall hydrolase/autolysin; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; SPTR: Cell wall hydrolase/autolysin; PFAM: N-acetylmuramoyl-L-alanine amidase
YP_004057765.1	COGs: COG0691 tmRNA-binding protein; InterPro IPR000037: IPR020081; KEGG: mrb:Mrub_1548 SsrA-binding protein; PFAM: SmpB protein; SPTR: SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; TIGRFAM: SsrA-binding protein
YP_004057766.1	COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: mrb:Mrub_2532 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004057767.1	COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: msv:Mesil_2056 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004057768.1	COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: tth:TTC0011 sugar ABC transporter, periplasmic sugar-binding protein, putative; PFAM: extracellular solute-binding protein family 1; SPTR: Sugar ABC transporter, periplasmic sugar-binding protein, putative; PFAM: Bacterial extracellular solute-binding protein
YP_004057769.1	COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterProIPR006424: IPR020830: IPR020831: IPR020832: IPR 020828: IPR020829; KEGG: tth:TTC0549 glyceraldehyde 3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); SPTR: Glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I
YP_004057770.1	COGs: COG0126 3-phosphoglycerate kinase; InterPro IPR015911: IPR001576; KEGG: tth:TTC0550 phosphoglycerate kinase; PFAM: phosphoglycerate kinase; PRIAM: Phosphoglycerate kinase; SPTR: Phosphoglycerate kinase; PFAM: Phosphoglycerate kinase
YP_004057771.1	COGs: COG0149 Triosephosphate isomerase; InterPro IPR000652: IPR020861; KEGG: ttj:TTHA0947 triosephosphate isomerase; PFAM: triosephosphate isomerase; PRIAM: Triose-phosphate isomerase; SPTR: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase
YP_004057772.1	COGs: COG0311 glutamine amidotransferase involved in pyridoxine biosynthesis; InterPro IPR002161: IPR021196; KEGG: msv:Mesil_2041 SNO glutamine amidotransferase; PFAM: SNO glutamine amidotransferase; SPTR: SNO glutamine amidotransferase; TIGRFAM: SNO glutamine amidotransferase; PFAM: SNO glutamine amidotransferase family; TIGRFAM: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2
YP_004057773.1	COGs: COG0214 Pyridoxine biosynthesis enzyme; InterPro IPR001852; KEGG: ttj:TTHA0704 pyridoxal biosynthesis lyase PdxS; PFAM: Vitamin B6 biosynthesis protein; SPTR: Pyridoxal biosynthesis lyase pdxS; TIGRFAM: pyridoxine biosynthesis protein; PFAM: SOR/SNZ family; TIGRFAM: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1
YP_004057774.1	COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR002482: IPR018392: IPR016047; KEGG: tth:TTC0351 cell wall endopeptidase; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: Cell wall endopeptidase, family M23/M37; PFAM: Peptidase family M23; LysM domain
YP_004057775.1	COGs: COG1158 Transcription termination factor; InterProIPR004665: IPR011129: IPR003593: IPR011112: IPR 011113: IPR000194; KEGG: msv:Mesil_2038 transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor RNA-binding; Rho termination factor domain protein; SMART: AAA ATPase; Cold shock protein; SPTR: Transcription termination factor Rho; TIGRFAM: transcription termination factor Rho; PFAM: Rho termination factor, N-terminal domain; Rho termination factor, RNA-binding domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: transcription termination factor Rho
YP_004057776.1	COGs: COG0176 Transaldolase; InterPro IPR004731: IPR018225: IPR001585; KEGG: ttj:TTHA1066 translaldolase; PFAM: Transaldolase; SPTR: Probable transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase; TIGRFAM: fructose-6-phosphate aldolase, TalC/MipB family
YP_004057777.1	COGs: COG0060 Isoleucyl-tRNA synthetase; InterPro IPR002301: IPR015905: IPR002300: IPR013155; KEGG: tth:TTC0702 isoleucyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ia; tRNA synthetase valyl/leucyl anticodon-binding; SPTR: Isoleucyl-tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: isoleucyl-tRNA synthetase
YP_004057778.1	InterPro IPR008915; KEGG: ttj:TTHA0833 hypothetical protein; PFAM: peptidase M50; SPTR: Membrane metalloprotease; PFAM: Peptidase family M50
YP_004057779.1	KEGG: ttj:TTHA0832 hypothetical protein; SPTR: Membrane metalloprotease; PFAM: Peptidase family M50
YP_004057780.1	COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR000644: IPR001667: IPR003156: IPR002646; KEGG: msv:Mesil_2030 polynucleotide adenylyltransferase region; PFAM: Polynucleotide adenylyltransferase region; CBS domain containing protein; phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SMART: CBS domain containing protein; SPTR: Polynucleotide adenylyltransferase region; PFAM: DHH family; CBS domain; Poly A polymerase head domain
YP_004057781.1	COGs: COG1197 Transcription-repair coupling factor (superfamily II helicase); InterProIPR014001: IPR001650: IPR014021: IPR003711: IPR 011545: IPR005118; KEGG: msv:Mesil_1974 transcription factor CarD; PFAM: transcription factor CarD; DEAD/DEAH box helicase domain protein; helicase domain protein; TRCF domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: Transcription factor CarD; PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd)
YP_004057782.1	InterPro IPR011701; KEGG: msv:Mesil_1835 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily
YP_004057783.1	COGs: COG4121 conserved hypothetical protein; InterPro IPR008471; KEGG: tth:TTC0523 methyltransferase; PFAM: protein of unknown function DUF752; SPTR: Methyltransferase; PFAM: Protein of unknown function (DUF752)
YP_004057784.1	COGs: COG1811 Uncharacterized membrane protein possible Na+ channel or pump; InterPro IPR007563; KEGG: tth:TTC0522 hypothetical protein; PFAM: protein of unknown function DUF554; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF554)
YP_004057785.1	COGs: COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit; InterPro IPR003837; KEGG: mrb:Mrub_1707 glutamyl-tRNA(Gln) amidotransferase C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; SPTR: Glutamyl-tRNA(Gln) amidotransferase, C subunit; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit
YP_004057786.1	COGs: COG0172 Seryl-tRNA synthetase; InterProIPR002317: IPR006195: IPR018156: IPR015866: IPR 002314; KEGG: rmr:Rmar_1968 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like; PRIAM: Serine--tRNA ligase; SPTR: Seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase
YP_004057787.1	COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: mrb:Mrub_1383 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase
YP_004057788.1	KEGG: nam:NAMH_0600 lipoprotein; SPTR: Putative lipoprotein
YP_004057789.1	COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR022272: IPR016160: IPR015590; KEGG: mrb:Mrub_1373 aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: Aldehyde Dehydrogenase; PFAM: Aldehyde dehydrogenase family
YP_004057790.1	COGs: COG0393 conserved hypothetical protein; InterPro IPR002765; KEGG: sti:Sthe_2450 protein of unknown function DUF74; PFAM: protein of unknown function DUF74; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF74)
YP_004057791.1	COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933: IPR011650; KEGG: msv:Mesil_2077 peptidase M20; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: Peptidase M20; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain
YP_004057792.1	InterPro IPR000551; KEGG: ttj:TTHA0508 MerR family transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: Transcriptional regulator, MerR family; PFAM: MerR family regulatory protein
YP_004057793.1	COGs: COG0281 Malic enzyme; InterPro IPR001891: IPR012301: IPR012302; KEGG: ttj:TTHA0520 malate dehydrogenase; PFAM: malic protein NAD-binding; malic protein domain protein; SPTR: Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP(+)); PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain
YP_004057794.1	COGs: COG0039 Malate/lactate dehydrogenase; InterPro IPR011275: IPR001557: IPR001236; KEGG: azl:AZL_025750 malate dehydrogenase; PFAM: Lactate/malate dehydrogenase; SPTR: Malate dehydrogenase; TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: malate dehydrogenase, NAD-dependent
YP_004057795.1	COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR018376: IPR001753; KEGG: mrb:Mrub_1796 enoyl-CoA hydratase/isomerase; PFAM: Enoyl-CoA hydratase/isomerase; SPTR: Enoyl-CoA hydratase/isomerase; PFAM: Enoyl-CoA hydratase/isomerase family
YP_004057796.1	KEGG: swi:Swit_4548 asparagine synthase; SPTR: Asparagine synthase
YP_004057797.1	KEGG: mrb:Mrub_1801 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057798.1	COGs: COG0069 Glutamate synthase domain 2; InterProIPR017932: IPR000583: IPR006982: IPR002932: IPR 002489; KEGG: tra:Trad_0209 glutamate synthase (ferredoxin); PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein; PRIAM: Glutamate synthase (ferredoxin); SPTR: Glutamate synthase (Ferredoxin); PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II
YP_004057799.1	COGs: COG2359 conserved hypothetical protein; InterPro IPR007347; KEGG: msv:Mesil_1701 stage V sporulation protein S; PFAM: Stage V sporulation protein S; SPTR: Stage V sporulation protein S; manually curated; PFAM: Stage V sporulation protein S (SpoVS)
YP_004057800.1	COGs: COG2738 Zn-dependent protease; InterPro IPR007395; KEGG: ttj:TTHA0896 Zn-dependent protease; PFAM: peptidase membrane zinc metallopeptidase; SPTR: Hypothetical membrane spanning protein; PFAM: Putative neutral zinc metallopeptidase
YP_004057801.1	COGs: COG0144 tRNA and rRNA cytosine-C5-methylase; InterPro IPR020559: IPR006027: IPR001678; KEGG: ttj:TTHA0851 Sun protein (RNA methyltransferase); PFAM: NusB/RsmB/TIM44; Fmu (Sun) domain protein; SPTR: Sun protein (RNA methyltransferase); PFAM: NOL1/NOP2/sun family; NusB family; TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB
YP_004057802.1	KEGG: mdo:100028508 similar to CDC91 cell division cycle 91-like 1 (S. cerevisiae); SPTR: ABC-type transporter, ATP-binding component
YP_004057803.1	COGs: COG0215 Cysteinyl-tRNA synthetase; InterPro IPR002308: IPR015803: IPR015273; KEGG: msv:Mesil_1698 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia; Cysteinyl-tRNA synthetase class Ia DALR; PRIAM: Cysteine--tRNA ligase; SPTR: Cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase
YP_004057804.1	InterPro IPR019587; KEGG: msv:Mesil_1697 cyclase/dehydrase; PFAM: Polyketide cyclase/dehydrase; SPTR: Cyclase/dehydrase; PFAM: Polyketide cyclase / dehydrase and lipid transport
YP_004057805.1	COGs: COG2137 conserved hypothetical protein; InterPro IPR003783; KEGG: tth:TTC0496 recombination regulator RecX; PFAM: regulatory protein RecX; SPTR: Regulatory protein recX; PFAM: RecX family
YP_004057806.1	COGs: COG1768 phosphohydrolase; InterPro IPR014578: IPR004843; KEGG: msv:Mesil_1687 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase
YP_004057807.1	KEGG: sde:Sde_2844 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057808.1	KEGG: met:M446_3183 hypothetical protein; SPTR: Pyruvate kinase
YP_004057809.1	KEGG: har:HEAR1928 hypothetical protein; SPTR: Amino acid ABC superfamily ATP binding cassette transporter permease
YP_004057810.1	InterPro IPR020827; KEGG: aag:AaeL_AAEL006677 phospholipase a-2-activating protein; SPTR: Phospholipase a-2-activating protein
YP_004057811.1	COGs: COG0590 Cytosine/adenosine deaminase; InterProIPR012795: IPR012796: IPR016192: IPR011063: IPR 002125; KEGG: msv:Mesil_1618 tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; CMP/dCMP deaminase zinc-binding; SPTR: tRNA(Ile)-lysidine synthetase; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: TilS substrate C-terminal domain; PP-loop family; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: tRNA(Ile)-lysidine synthetase, C-terminal domain; tRNA(Ile)-lysidine synthetase, N-terminal domain
YP_004057812.1	COGs: COG0585 conserved hypothetical protein; InterPro IPR001656: IPR011760: IPR020119; KEGG: msv:Mesil_1617 tRNA pseudouridine synthase D TruD; PFAM: tRNA pseudouridine synthase D TruD; SPTR: tRNA pseudouridine synthase D TruD; PFAM: tRNA pseudouridine synthase D (TruD); TIGRFAM: tRNA pseudouridine synthase, TruD family
YP_004057813.1	KEGG: ttj:TTHA1543 hypothetical protein; SPTR: Putative uncharacterized protein TTHA1543
YP_004057814.1	SPTR: Putative uncharacterized protein
YP_004057815.1	COGs: COG0038 Chloride channel protein EriC; InterPro IPR006037: IPR001807; KEGG: dat:HRM2_22170 EriC2; PFAM: Cl- channel voltage-gated family protein; TrkA-C domain protein; SPTR: EriC2; PFAM: Voltage gated chloride channel; TrkA-C domain
YP_004057816.1	KEGG: msv:Mesil_1616 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057817.1	KEGG: msv:Mesil_1615 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057818.1	COGs: COG2050 Uncharacterized protein possibly involved in aromatic compounds catabolism; InterPro IPR003736: IPR006683; KEGG: mrb:Mrub_2101 thioesterase superfamily protein; PFAM: thioesterase superfamily protein; SPTR: Thioesterase superfamily protein; PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1
YP_004057819.1	COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR006268: IPR006218; KEGG: ttj:TTHA0800 3-deoxy-7-phosphoheptulonate synthase; PFAM: DAHP synthetase I/KDSA; PRIAM: 3-deoxy-7-phosphoheptulonate synthase; SPTR: Phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase
YP_004057820.1	COGs: COG0287 Prephenate dehydrogenase; InterPro IPR003099: IPR002912; KEGG: msv:Mesil_1613 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase; amino acid-binding ACT domain protein; SPTR: Prephenate dehydrogenase; PFAM: Prephenate dehydrogenase; ACT domain
YP_004057821.1	COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006015: IPR006016; KEGG: tth:TTC1692 universal stress protein; PFAM: UspA domain-containing protein; SPTR: UspA domain protein; PFAM: Universal stress protein family
YP_004057822.1	COGs: COG1030 Membrane-bound serine protease (ClpP class); InterPro IPR002810; KEGG: msv:Mesil_2227 protein of unknown function DUF107; PFAM: protein of unknown function DUF107; SPTR: Putative uncharacterized protein; PFAM: Clp protease; NfeD-like
YP_004057823.1	COGs: COG4864 conserved hypothetical protein; InterPro IPR001107; KEGG: ttj:TTHA1048 hypothetical protein; PFAM: band 7 protein; SPTR: Band 7 protein; PFAM: SigmaW regulon antibacterial
YP_004057824.1	KEGG: mrb:Mrub_1816 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057825.1	COGs: COG1702 Phosphate starvation-inducible protein PhoH predicted ATPase; InterPro IPR003714; KEGG: mrb:Mrub_1815 PhoH family protein; PFAM: PhoH family protein; SPTR: PhoH family protein; PFAM: PhoH-like protein
YP_004057826.1	COGs: COG0319 metal-dependent hydrolase; InterPro IPR002036; KEGG: ttj:TTHA1045 hypothetical protein; PFAM: protein of unknown function UPF0054; SPTR: Putative metalloprotease TT_C0683; manually curated; PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family
YP_004057827.1	COGs: COG0818 Diacylglycerol kinase; InterPro IPR000829; KEGG: ttj:TTHA1044 diacylglycerol kinase; PFAM: diacylglycerol kinase; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic diacylglycerol kinase
YP_004057828.1	COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR000644: IPR002550: IPR005170; KEGG: ttj:TTHA0734 hemolysin-related protein; PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein; SPTR: Hemolysin-related protein; PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain
YP_004057829.1	COGs: COG0295 Cytidine deaminase; InterPro IPR006262: IPR016192: IPR002125; KEGG: mrb:Mrub_1835 cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; SPTR: Cytidine deaminase; TIGRFAM: cytidine deaminase; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric
YP_004057830.1	COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: nph:NP3790A homolog 2 to S-adenosylmethionine-dependent methyltransferase 3; PFAM: Methyltransferase type 11; SPTR: S-adenosylmethionine-dependent methyltransferase 3 family protein; PFAM: Methyltransferase domain
YP_004057831.1	KEGG: mrb:Mrub_2328 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Late embryogenesis abundant protein
YP_004057832.1	COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR020625: IPR002220; KEGG: mrb:Mrub_2327 dihydrodipicolinate synthetase; PFAM: dihydrodipicolinate synthetase; SPTR: Dihydrodipicolinate synthetase; PFAM: Dihydrodipicolinate synthetase family
YP_004057833.1	KEGG: ttj:TTHA0738 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057834.1	COGs: COG1760 L-serine deaminase; InterPro IPR004643: IPR005131: IPR004294: IPR002912; KEGG: ttj:TTHA0739 L-serine dehydratase, beta subunit; PFAM: serine dehydratase beta chain; Carotenoid oxygenase; amino acid-binding ACT domain protein; PRIAM: L-serine ammonia-lyase; SPTR: L-serine dehydratase, beta subunit; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, beta subunit; PFAM: ACT domain; Serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, beta subunit
YP_004057835.1	KEGG: mrb:Mrub_2900 MarR regulatory protein; SPTR: Regulatory protein, MarR
YP_004057836.1	COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: tra:Trad_1172 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; PFAM: Predicted permease
YP_004057837.1	KEGG: mrb:Mrub_2902 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057838.1	COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: mrb:Mrub_2903 hypothetical protein; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; PFAM: Predicted permease
YP_004057839.1	COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593: IPR003439: IPR017871; KEGG: mrb:Mrub_2904 ABC transporter-like protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter; PFAM: ABC transporter
YP_004057840.1	KEGG: mrb:Mrub_2905 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057841.1	COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439: IPR003593; KEGG: mrb:Mrub_0140 ABC transporter-like protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter; PFAM: ABC transporter
YP_004057842.1	COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; KEGG: ttj:TTHA0451 branched chain amino acid ABC transporter amino acid-binding protein; SPTR: Probable branched-chain amino acid ABC transporter, amno acid binding protein
YP_004057843.1	COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: ttj:TTHA0450 branched-chain amino acid ABC transporter, permease protein; PFAM: inner-membrane translocator; SPTR: Branched-chain amino acid ABC transporter, permease protein; PFAM: Branched-chain amino acid transport system / permease component
YP_004057844.1	COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: ttj:TTHA0449 branched-chain amino acid ABC transporter, permease protein; PFAM: inner-membrane translocator; SPTR: Branched-chain amino acid ABC transporter, permease protein; PFAM: Branched-chain amino acid transport system / permease component
YP_004057845.1	COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR000873: IPR020845; KEGG: msv:Mesil_1543 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme
YP_004057846.1	COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439: IPR003593; KEGG: msv:Mesil_1542 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter
YP_004057847.1	COGs: COG0134 Indole-3-glycerol phosphate synthase; InterPro IPR013798: IPR001468; KEGG: ttj:TTHA1164 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; PRIAM: Indole-3-glycerol-phosphate synthase; SPTR: Indole-3-glycerol phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase
YP_004057848.1	KEGG: mrb:Mrub_1221 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057849.1	COGs: COG1446 Asparaginase; InterPro IPR000246; KEGG: ade:Adeh_2366 peptidase T2, asparaginase 2; PFAM: peptidase T2 asparaginase 2; PRIAM: Beta-aspartyl-peptidase; SPTR: Peptidase T2, asparaginase 2; PFAM: Asparaginase
YP_004057850.1	KEGG: msv:Mesil_1938 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057851.1	COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR014016: IPR014017: IPR000212; KEGG: msv:Mesil_1937 UvrD/REP helicase; PFAM: UvrD/REP helicase; SPTR: UvrD/REP helicase; PFAM: UvrD/REP helicase
YP_004057852.1	COGs: COG1109 Phosphomannomutase; InterProIPR005844: IPR005845: IPR005846: IPR005843: IPR 016066: IPR005841; KEGG: mrb:Mrub_1899 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; SPTR: Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
YP_004057853.1	COGs: COG5621 secreted hydrolase; KEGG: msv:Mesil_1886 protein of unknown function DUF2006; SPTR: Putative uncharacterized protein; PFAM: Hydroxyneurosporene synthase (CrtC)
YP_004057854.1	COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit; InterPro IPR011766: IPR011896; KEGG: pas:Pars_1249 2-oxoacid ferredoxin oxidoreductase subunit beta; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; SPTR: 2-oxoglutarate ferredoxin oxidoreductase subunit beta; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: Pyruvate ferredoxin oxidoreductase beta subunit C terminal; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family
YP_004057855.1	COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR019752: IPR002880; KEGG: sul:SYO3AOP1_0618 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; SPTR: Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; PFAM: domain; Transketolase, C-terminal domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, alpha subunit
YP_004057856.1	COGs: COG0084 Mg-dependent DNase; InterPro IPR012278: IPR001130: IPR018228: IPR015991; KEGG: msv:Mesil_1885 hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; SPTR: Hydrolase, TatD family; TIGRFAM: hydrolase, TatD family; manually curated; PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family
YP_004057857.1	COGs: COG0301 Thiamine biosynthesis ATP pyrophosphatase; InterPro IPR004114: IPR020536: IPR003720; KEGG: nde:NIDE1125 thiamine biosynthesis protein ThiI; PFAM: Thiamine biosynthesis protein-like; THUMP domain-containing protein; SPTR: Probable tRNA sulfurtransferase; TIGRFAM: thiamine biosynthesis/tRNA modification protein ThiI; PFAM: Thiamine biosynthesis protein (ThiI); THUMP domain; TIGRFAM: thiazole biosynthesis/tRNA modification protein ThiI
YP_004057858.1	COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; InterPro IPR001736: IPR004365; KEGG: tth:TTC1085 hypothetical protein; PFAM: nucleic acid binding OB-fold tRNA/helicase-type; phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; SPTR: Hypothetical membrane associated protein; PFAM: OB-fold nucleic acid binding domain
YP_004057859.1	KEGG: ttj:TTHA1451 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057860.1	COGs: COG0017 Aspartyl/asparaginyl-tRNA synthetase; InterProIPR006195: IPR004365: IPR004364: IPR004523: IPR 002312; KEGG: mrb:Mrub_2287 aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; SPTR: Aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, archaeal type
YP_004057861.1	COGs: COG0728 membrane protein virulence factor; InterPro IPR004268; KEGG: ttj:TTHA1286 virulence factor-related protein; PFAM: virulence factor MVIN family protein; SPTR: Virulence factor-related protein; TIGRFAM: integral membrane protein MviN; PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN
YP_004057862.1	COGs: COG0419 ATPase involved in DNA repair; InterPro IPR003395: IPR018039; KEGG: msv:Mesil_1882 SMC domain protein; PFAM: SMC domain protein; SPTR: SMC domain protein; PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: exonuclease SbcC
YP_004057863.1	COGs: COG0420 DNA repair exonuclease; InterPro IPR004843: IPR004593; KEGG: msv:Mesil_1881 nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; SPTR: Nuclease SbcCD, D subunit; TIGRFAM: nuclease SbcCD, D subunit; PFAM: Calcineurin-like phosphoesterase; Type 5 capsule protein repressor C terminal; TIGRFAM: exonuclease SbcD
YP_004057864.1	COGs: COG0433 ATPase; KEGG: ttj:TTHA0522 hypothetical protein; SPTR: Hypothetical conserved protein
YP_004057865.1	COGs: COG2380 conserved hypothetical protein; InterPro IPR018977; KEGG: ttj:TTHA0521 hypothetical protein; PFAM: NurA domain; SPTR: Putative uncharacterized protein TTHA0521
YP_004057866.1	COGs: COG3063 Tfp pilus assembly protein PilF; InterPro IPR019734: IPR013026: IPR001440; KEGG: ttj:TTHA0629 TPR repeat-containing O-linked GlcNAc transferase; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: TPR repeat-containing protein; PFAM: Tetratricopeptide repeat
YP_004057867.1	COGs: COG1220 ATP-dependent protease HslVU (ClpYQ) ATPase subunit; InterPro IPR003593: IPR011704: IPR013093: IPR004491; KEGG: msv:Mesil_1659 heat shock protein HslVU, ATPase subunit HslU; PFAM: ATPase AAA-2 domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; SPTR: Heat shock protein HslVU, ATPase subunit HslU; TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent protease HslVU, ATPase subunit
YP_004057868.1	COGs: COG5405 ATP-dependent protease HslVU (ClpYQ) peptidase subunit; InterPro IPR001353; KEGG: msv:Mesil_1658 20S proteasome A and B subunits; PFAM: 20S proteasome A and B subunits; SPTR: 20S proteasome A and B subunits; PFAM: Proteasome subunit; TIGRFAM: ATP-dependent protease HslVU, peptidase subunit
YP_004057869.1	COGs: COG1206 NAD(FAD)-utilizing enzyme possibly involved in translation; InterPro IPR002218: IPR004417; KEGG: tth:TTC1077 tRNA (uracil-5-)-methyltransferase Gid; PFAM: glucose-inhibited division protein A; PRIAM:Methylenetetrahydrofolate--tRNA-(uracil-5-)-m ethyltransferase(FADH(2)-oxidizing); SPTR:Methylenetetrahydrofolate--tRNA-(uracil-5-)-me thyltransferasetrmFO; TIGRFAM: gid protein; PFAM: Glucose inhibited division protein A; TIGRFAM: tRNA:m(5)U-54 methyltransferase
YP_004057870.1	COGs: COG3839 ABC-type sugar transport systems ATPase components; InterPro IPR003439: IPR003593: IPR013611: IPR017871; KEGG: ttj:TTHA0579 sugar ABC transportor, ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; SPTR: Sugar ABC transportor, ATP-binding protein; PFAM: ABC transporter; TOBE domain
YP_004057871.1	COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterProIPR005467: IPR003660: IPR003661: IPR003594: IPR 004358; KEGG: msv:Mesil_2372 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: Integral membrane sensor signal transduction histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_004057872.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792: IPR001789; KEGG: msv:Mesil_2373 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: Two component transcriptional regulator, LuxR family; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_004057873.1	COGs: COG3870 conserved hypothetical protein; InterPro IPR010375; KEGG: msv:Mesil_2374 protein of unknown function DUF970; PFAM: protein of unknown function DUF970; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF970)
YP_004057874.1	COGs: COG1651 Protein-disulfide isomerase; InterPro IPR017936: IPR001853; KEGG: msv:Mesil_2375 DsbA oxidoreductase; PFAM: DSBA oxidoreductase; SPTR: DSBA oxidoreductase
YP_004057875.1	COGs: COG2519 tRNA(1-methyladenosine) methyltransferase and related methyltransferase; InterPro IPR000682; KEGG: msv:Mesil_2376 tRNA (adenine-N(1)-)-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; PRIAM: tRNA (adenine-N(1)-)-methyltransferase; SPTR: tRNA (Adenine-N(1)-)-methyltransferase; PFAM: tRNA methyltransferase complex GCD14 subunit
YP_004057876.1	InterPro IPR011701; KEGG: dge:Dgeo_1065 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily
YP_004057877.1	COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP; InterPro IPR008616: IPR008532; KEGG: mrb:Mrub_0641 fibronectin-binding A domain-containing protein; PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; SPTR: Fibronectin-binding A domain protein; PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA)
YP_004057878.1	COGs: COG0853 Aspartate 1-decarboxylase; InterPro IPR003190; KEGG: ttj:TTHA0606 aspartate alpha-decarboxylase; PFAM: aspartate decarboxylase; PRIAM: Aspartate 1-decarboxylase; SPTR: Aspartate 1-decarboxylase; TIGRFAM: aspartate 1-decarboxylase; PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase
YP_004057879.1	COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase; InterPro IPR000537: IPR006371; KEGG: mrb:Mrub_0176 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase; SPTR: 4-hydroxybenzoate polyprenyltransferase; TIGRFAM: 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase family; TIGRFAM: 4-hydroxybenzoate polyprenyltransferase
YP_004057880.1	COGs: COG1281 Disulfide bond chaperones of the HSP33 family; InterPro IPR000397; KEGG: tth:TTC0538 33 kDa chaperonin; PFAM: Hsp33 protein; SPTR: 33 kDa chaperonin; PFAM: Hsp33 protein
YP_004057881.1	COGs: COG0669 Phosphopantetheine adenylyltransferase; InterPro IPR004820: IPR001980: IPR004821; KEGG: ttj:TTHA0929 phosphopantetheine adenylyltransferase; PFAM: cytidylyltransferase; PRIAM: Pantetheine-phosphate adenylyltransferase; SPTR: Phosphopantetheine adenylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain
YP_004057882.1	COGs: COG0742 N6-adenine-specific methylase; InterPro IPR004398: IPR002052; KEGG: ttj:TTHA0928 methyltransferase; PFAM: Conserved hypothetical protein CHP00095; SPTR: Methyltransferase; PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family
YP_004057883.1	COGs: COG1283 Na+/phosphate symporter; InterPro IPR003841: IPR008170; KEGG: msv:Mesil_1951 PhoU family protein; PFAM: Na+/Picotransporter; PhoU family protein; SPTR: PhoU family protein; PFAM: PhoU domain; Na+/Pi-cotransporter; TIGRFAM: Na/Pi-cotransporter
YP_004057884.1	KEGG: dol:Dole_2731 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057885.1	COGs: COG0466 ATP-dependent Lon protease; InterProIPR003111: IPR003593: IPR003959: IPR008268: IPR 004815: IPR001984; KEGG: ttj:TTHA0770 ATP-dependent protease La (Lon protease); PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; PRIAM: Endopeptidase La; SMART: peptidase S16 lon domain protein; AAA ATPase; SPTR: ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La
YP_004057886.1	COGs: COG1219 ATP-dependent protease Clp ATPase subunit; InterProIPR003593: IPR010603: IPR013093: IPR019489: IPR 004487; KEGG: tth:TTC0251 ATP-dependent protease ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; SMART: AAA ATPase; SPTR: ATP-dependent Clp protease ATP-binding subunit clpX; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX)
YP_004057887.1	COGs: COG0740 Protease subunit of ATP-dependent Clp protease; InterPro IPR001907: IPR018215; KEGG: ttj:TTHA0615 ATP-dependent Clp protease proteolytic subunit; PFAM: peptidase S14 ClpP; PRIAM: Endopeptidase Clp; SPTR: ATP-dependent Clp protease proteolytic subunit; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP
YP_004057888.1	COGs: COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); InterPro IPR005215: IPR008881: IPR008880; KEGG: ttj:TTHA0614 trigger factor; PFAM: trigger factor domain-containing protein; SPTR: Trigger factor; TIGRFAM: trigger factor; PFAM: Bacterial trigger factor protein (TF) C-terminus; Bacterial trigger factor protein (TF); TIGRFAM: trigger factor
YP_004057889.1	InterPro IPR003675; KEGG: mrb:Mrub_1506 abortive infection protein; PFAM: Abortive infection protein; SPTR: Abortive infection protein; PFAM: CAAX amino terminal protease family
YP_004057890.1	COGs: COG0538 Isocitrate dehydrogenase; InterPro IPR001804: IPR019818: IPR004439; KEGG: msv:Mesil_1684 isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase; SPTR: Isocitrate dehydrogenase [NADP]; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, prokaryotic type
YP_004057891.1	COGs: COG1970 Large-conductance mechanosensitive channel; InterPro IPR001185: IPR019823; KEGG: rmr:Rmar_0647 large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; SPTR: Large conductance mechanosensitive channel protein; TIGRFAM: large conductance mechanosensitive channel protein; PFAM: Large-conductance mechanosensitive channel, MscL; TIGRFAM: large conductance mechanosensitive channel protein
YP_004057892.1	InterPro IPR000086: IPR020084: IPR020476; KEGG: tth:TTC0511 phosphohydrolase (MutT/NUDIX family protein); PFAM: NUDIX hydrolase; SPTR: Phosphohydrolase (MutT/nudix family protein); PFAM: NUDIX domain
YP_004057893.1	COGs: COG3180 Putative ammonia monooxygenase; InterPro IPR017516; KEGG: msv:Mesil_0784 membrane protein AbrB duplication; SPTR: Membrane protein AbrB duplication; TIGRFAM: membrane protein AbrB duplication; PFAM: Putative ammonia monooxygenase; TIGRFAM: membrane protein AbrB duplication
YP_004057894.1	COGs: COG2001 conserved hypothetical protein; InterPro IPR003444: IPR020603; KEGG: tra:Trad_1598 MraZ protein; PFAM: MraZ domain; SPTR: MraZ protein; TIGRFAM: MraZ protein; PFAM: MraZ protein; TIGRFAM: mraZ protein
YP_004057895.1	COGs: COG0275 S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; InterPro IPR002903; KEGG: msv:Mesil_1680 S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; SPTR: S-adenosyl-methyltransferase MraW; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW
YP_004057896.1	KEGG: msv:Mesil_1679 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057897.1	COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR001460; KEGG: msv:Mesil_1678 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Peptidoglycan glycosyltransferase; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain
YP_004057898.1	COGs: COG0770 UDP-N-acetylmuramyl pentapeptide synthase; InterPro IPR000713: IPR013221: IPR004101: IPR005863; KEGG: msv:Mesil_1677 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; SPTR:UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diam inopimelate/D-alanyl-D-alanylligase; TIGRFAM:UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-d iaminopimelate/D-alanyl-D-alanylligase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
YP_004057899.1	KEGG: msv:Mesil_1676 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057900.1	COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; InterPro IPR018480: IPR018481; KEGG: msv:Mesil_1675 phospho-N-acetylmuramoyl-pentapeptide transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; SPTR: Phospho-N-acetylmuramoyl-pentapeptide transferase; PFAM: Glycosyl transferase family 4; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase
YP_004057901.1	COGs: COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase; InterPro IPR013221: IPR004101: IPR005762; KEGG: ttj:TTHA1082 UDP-N-acetylmuramoylalanine--D-glutamiate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; SPTR: UDP-N-acetylmuramoylalanine--D-glutamate ligase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase
YP_004057902.1	COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182; KEGG: msv:Mesil_1673 cell cycle protein; PFAM: cell cycle protein; SPTR: Cell cycle protein; PFAM: Cell cycle protein
YP_004057903.1	COGs: COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; InterPro IPR004276: IPR007235: IPR006009; KEGG: msv:Mesil_1672 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain; PRIAM: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; SPTR: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; TIGRFAM:UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: Glycosyltransferase family 28 N-terminal domain; Glycosyltransferase family 28 C-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
YP_004057904.1	COGs: COG0773 UDP-N-acetylmuramate-alanine ligase; InterPro IPR000713: IPR013221: IPR004101: IPR005758; KEGG: msv:Mesil_1671 UDP-N-acetylmuramate/alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; SPTR: UDP-N-acetylmuramate/alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate--alanine ligase
YP_004057905.1	COGs: COG0812 UDP-N-acetylmuramate dehydrogenase; InterPro IPR016166: IPR006094: IPR011601: IPR003170; KEGG: tth:TTC0721 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain-containing protein; FAD linked oxidase domain protein; PRIAM: UDP-N-acetylmuramate dehydrogenase; SPTR: UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase
YP_004057906.1	InterPro IPR013685; KEGG: msv:Mesil_1669 polypeptide-transport-associated domain protein FtsQ-type; PFAM: Polypeptide-transport-associated domain protein FtsQ-type; SPTR: Polypeptide-transport-associated domain protein FtsQ-type; PFAM: POTRA domain, FtsQ-type
YP_004057907.1	COGs: COG0849 Actin-like ATPase involved in cell division; InterPro IPR003494: IPR020823; KEGG: msv:Mesil_1668 cell division protein FtsA; PFAM: cell division protein FtsA; SPTR: Cell division protein FtsA; TIGRFAM: cell division protein FtsA; PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA
YP_004057908.1	COGs: COG0206 Cell division GTPase; InterProIPR003008: IPR018316: IPR002173: IPR020805: IPR 000158; KEGG: ttj:TTHA1089 cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain; SPTR: Cell division protein ftsZ; TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ
YP_004057909.1	COGs: COG0653 Preprotein translocase subunit SecA (ATPase RNA helicase); InterProIPR000595: IPR014018: IPR011115: IPR011130: IPR 011116: IPR004027: IPR020937: IPR000185; KEGG: ttj:TTHA1251 preprotein translocase subunit SecA; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; SecA Wing and Scaffold; SEC-C motif domain protein; SPTR: Protein translocase subunit secA; TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SEC-C motif; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit
YP_004057910.1	COGs: COG0533 Metal-dependent protease with possible chaperone activity; InterPro IPR000905: IPR017861; KEGG: msv:Mesil_1642 metalloendopeptidase, glycoprotease family; PFAM: peptidase M22 glycoprotease; PRIAM: O-sialoglycoprotein endopeptidase; SPTR: Metalloendopeptidase, glycoprotease family; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: Glycoprotease family; TIGRFAM: glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family
YP_004057911.1	COGs: COG2813 16S RNA G1207 methylase RsmC; InterPro IPR007848: IPR002052; KEGG: ttj:TTHA0533 ribosomal RNA small subunit methyltransferase; PFAM: methyltransferase small; SPTR: Methyltransferase small; PFAM: Methyltransferase small domain
YP_004057912.1	COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR009042: IPR007627: IPR007624: IPR007630: IPR 000943: IPR005479: IPR014284: IPR012760; KEGG: msv:Mesil_2297 RNA polymerase, sigma 70 subunit, RpoD subfamily; PFAM: sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein; SPTR: RNA polymerase, sigma 70 subunit, RpoD subfamily; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain
YP_004057913.1	KEGG: stp:Strop_3505 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057914.1	COGs: COG2423 ornithine cyclodeaminase mu-crystallin homolog; InterPro IPR003462; KEGG: msv:Mesil_1519 ornithine cyclodeaminase/mu-crystallin; PFAM: ornithine cyclodeaminase/mu-crystallin; SPTR: Ornithine cyclodeaminase/mu-crystallin; PFAM: Ornithine cyclodeaminase/mu-crystallin family
YP_004057915.1	COGs: COG4372 Uncharacterized protein with the myosin-like domain; KEGG: msv:Mesil_1518 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3084)
YP_004057916.1	COGs: COG1137 ABC-type (unclassified) transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: msv:Mesil_1517 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter; PFAM: ABC transporter
YP_004057917.1	KEGG: tth:TTC0395 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057918.1	COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641; KEGG: tth:TTC0797 hypothetical protein; PFAM: Patatin; SPTR: Putative uncharacterized protein; PFAM: Patatin-like phospholipase
YP_004057919.1	KEGG: sen:SACE_3042 dicarboxylate carrier protein; SPTR: Dicarboxylate carrier protein
YP_004057920.1	COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: msv:Mesil_3400 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; PFAM: ABC transporter
YP_004057921.1	COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515: IPR010065; KEGG: amr:AM1_1015 polar amino acid ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_004057922.1	COGs: COG4597 ABC-type amino acid transport system permease component; InterPro IPR000515: IPR010065; KEGG: msv:Mesil_3398 hypothetical protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Putative uncharacterized protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_004057923.1	COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001638: IPR018313; KEGG: msv:Mesil_3397 hypothetical protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; SPTR: Putative uncharacterized protein; PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: lysine-arginine-ornithine-binding periplasmic protein
YP_004057924.1	COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515: IPR010065; KEGG: ttj:TTHA1170 amino acid ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family
YP_004057925.1	COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001320: IPR001638; KEGG: ttj:TTHA1171 amino acid ABC transporter, periplasmic amino acid-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; SPTR: Amino acid ABC transporter, binding protein; PFAM: Bacterial extracellular solute-binding proteins, family 3
YP_004057926.1	COGs: COG2265 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase; InterPro IPR002792: IPR010280; KEGG: msv:Mesil_2161 (uracil-5)-methyltransferase; PFAM: (Uracil-5)-methyltransferase; SPTR: (Uracil-5)-methyltransferase; PFAM: tRNA (Uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA
YP_004057927.1	InterPro IPR006442; KEGG: gob:Gobs_1597 prevent-host-death family protein; SPTR: Putative uncharacterized protein; TIGRFAM: prevent-host-death family protein; PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein
YP_004057928.1	COGs: COG3744 conserved hypothetical protein; InterPro IPR002716; KEGG: ttj:TTHA0487 hypothetical protein; PFAM: PilT protein domain protein; SPTR: Hypothetical conserved protein; PFAM: PIN domain
YP_004057929.1	COGs: COG0107 Imidazoleglycerol-phosphate synthase; InterPro IPR006062: IPR018313: IPR004651; KEGG: mrb:Mrub_1637 imidazoleglycerol phosphate synthase cyclase subunit; PFAM: histidine biosynthesis protein; SPTR: Imidazole glycerol phosphate synthase subunit hisF; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit
YP_004057930.1	COGs: COG0139 Phosphoribosyl-AMP cyclohydrolase; InterPro IPR002496: IPR021130: IPR008179; KEGG: mrb:Mrub_1638 phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-AMP cyclohydrolase; Phosphoribosyl-ATP pyrophosphohydrolase-like; SPTR: Phosphoribosyl-ATP diphosphatase; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-AMP cyclohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase
YP_004057931.1	COGs: COG1494 Fructose-1 6-bisphosphatase/sedoheptulose 1 7-bisphosphatase and related protein; InterPro IPR004464; KEGG: ttj:TTHA1446 fructose 1,6-bisphosphatase II; PFAM: GlpX family protein; PRIAM: Fructose-bisphosphatase; SPTR: Fructose-1,6-bisphosphatase, class II; TIGRFAM: fructose-1,6-bisphosphatase, class II; PFAM: Bacterial fructose-1,6-bisphosphatase, glpX-encoded; TIGRFAM: fructose-1,6-bisphosphatase, class II
YP_004057932.1	COGs: COG1640 4-alpha-glucanotransferase; InterPro IPR003385; KEGG: msv:Mesil_1468 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77; PRIAM: 4-alpha-glucanotransferase; SPTR: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase
YP_004057933.1	KEGG: tra:Trad_2381 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3048)
YP_004057934.1	COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: tra:Trad_2382 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR
YP_004057935.1	COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: tra:Trad_2383 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel; SPTR: MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel family
YP_004057936.1	COGs: COG1060 Thiamine biosynthesis protein ThiH; InterPro IPR005244: IPR006638: IPR007197: IPR020050; KEGG: ttj:TTHA0804 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Biotin synthase/thiamine biosynthesis enzyme; PFAM: Radical SAM superfamily; TIGRFAM: menaquinone biosynthesis protein, SCO4494 family; radical SAM domain protein, CofH subfamily
YP_004057937.1	COGs: COG1427 periplasmic solute-binding protein; InterPro IPR003773; KEGG: msv:Mesil_1524 protein of unknown function DUF178; PFAM: protein of unknown function DUF178; SPTR: Putative uncharacterized protein; PFAM: Putative periplasminc binding protein (DUF178)
YP_004057938.1	COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478: IPR001254: IPR001940; KEGG: ttj:TTHA1320 periplasmic serine protease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; SPTR: Periplasmic serine protease; PFAM: Trypsin
YP_004057939.1	COGs: COG3426 Butyrate kinase; InterPro IPR000890: IPR011245; KEGG: tte:TTE2201 butyrate kinase; PFAM: acetate and butyrate kinase; PRIAM: Butyrate kinase; SPTR: Branched-chain-fatty-acid kinase; TIGRFAM: butyrate kinase; PFAM: Acetokinase family; TIGRFAM: butyrate kinase
YP_004057940.1	COGs: COG0280 Phosphotransacetylase; InterPro IPR012147: IPR002505; KEGG: tai:Taci_0453 phosphate butyryltransferase; PFAM: phosphate acetyl/butaryl transferase; PRIAM: Phosphate butyryltransferase; SPTR: Phosphate butyryltransferase; PFAM: Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate butyryltransferase
YP_004057941.1	InterPro IPR009056; KEGG: tth:TTC0962 cytochrome c-552 precursor; SPTR: Cytochrome c class I; PFAM: Cytochrome c
YP_004057942.1	COGs: COG2041 Sulfite oxidase; InterProIPR017909: IPR000572: IPR005066: IPR006311: IPR 008335; KEGG: tth:TTC0961 sulfite reductase; PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; SPTR: Probable sulfite reductase; PFAM: Mo-co oxidoreductase dimerisation domain; Oxidoreductase molybdopterin binding domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_004057943.1	InterPro IPR009056: IPR003088; KEGG: tth:TTC0962 cytochrome c-552 precursor; PFAM: cytochrome c class I; SPTR: Cytochrome c-552; PFAM: Cytochrome c
YP_004057944.1	KEGG: ttj:TTHA0530 hypothetical protein; SPTR: Hypothetical cytosolic protein
YP_004057945.1	COGs: COG2236 phosphoribosyltransferase; InterPro IPR000836; KEGG: msv:Mesil_1712 phosphoribosyltransferase; PFAM: phosphoribosyltransferase; SPTR: Phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain
YP_004057946.1	COGs: COG0527 Aspartokinase; InterPro IPR001048: IPR002912: IPR018042: IPR001341; KEGG: msv:Mesil_1711 aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; SPTR: Aspartate kinase; TIGRFAM: aspartate kinase; PFAM: ACT domain; Amino acid kinase family; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase
YP_004057947.1	COGs: COG0460 Homoserine dehydrogenase; InterPro IPR005106: IPR001342; KEGG: msv:Mesil_1361 homoserine dehydrogenase; PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; PRIAM: Homoserine dehydrogenase; SPTR: Homoserine dehydrogenase; PFAM: Homoserine dehydrogenase, NAD binding domain; Homoserine dehydrogenase
YP_004057948.1	COGs: COG0498 Threonine synthase; InterPro IPR001926: IPR000634: IPR004450; KEGG: ttj:TTHA0491 threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase
YP_004057949.1	KEGG: ttj:TTHA0492 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057950.1	KEGG: tth:TTC0119 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057951.1	KEGG: mrb:Mrub_0974 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057952.1	COGs: COG0793 Periplasmic protease; InterPro IPR005151; KEGG: msv:Mesil_1354 peptidase S41; PFAM: peptidase S41; SMART: peptidase S41; SPTR: Peptidase S41; PFAM: Peptidase family S41
YP_004057953.1	COGs: COG2074 2-phosphoglycerate kinase; InterPro IPR005144; KEGG: msv:Mesil_1353 ATP-cone domain protein; SPTR: ATP-cone domain protein
YP_004057954.1	KEGG: app:CAP2UW1_4642 conjugal transfer peptidase TraF; SPTR: Putative uncharacterized protein
YP_004057955.1	COGs: COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase; InterPro IPR003593: IPR003959; KEGG: mrb:Mrub_0736 AAA ATPase central domain-containing protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; SPTR: AAA ATPase central domain protein; PFAM: MgsA AAA+ ATPase C terminal; ATPase family associated with various cellular activities (AAA)
YP_004057956.1	KEGG: ttj:TTHA1885 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057957.1	COGs: COG3327 Phenylacetic acid-responsive transcriptional repressor; InterPro IPR012906: IPR013225; KEGG: mrb:Mrub_2629 PaaX family transcriptional regulator; PFAM: PaaX domain protein domain; PaaX domain protein; SPTR: Transcriptional regulator, PaaX family; PFAM: PaaX-like protein; PaaX-like protein C-terminal domain
YP_004057958.1	COGs: COG0441 Threonyl-tRNA synthetase; InterProIPR006195: IPR004095: IPR012947: IPR002314: IPR 004154: IPR002320: IPR018158; KEGG: ttj:TTHA1875 threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Threonyl/alanyl tRNA synthetase SAD; TGS domain-containing protein; Anticodon-binding domain protein; SPTR: Threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TGS domain; TIGRFAM: threonyl-tRNA synthetase
YP_004057959.1	COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterProIPR001623: IPR001305: IPR002939: IPR018253: IPR 012724: IPR003095; KEGG: ttj:TTHA0174 alternative chaperone protein DnaJ; PFAM: heat shock protein DnaJ domain protein; DnaJ central domain protein; chaperone DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: Chaperone protein dnaJ 1; TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ C terminal region; DnaJ central domain (4 repeats); DnaJ domain; TIGRFAM: chaperone protein DnaJ
YP_004057960.1	COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); InterProIPR011761: IPR005481: IPR005479: IPR005480: IPR 006275: IPR005483; KEGG: mrb:Mrub_0916 carbamoyl-phosphate synthase large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; SPTR: Carbamoyl-phosphate synthase, large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit
YP_004057961.1	COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016: IPR006015; KEGG: msv:Mesil_0228 UspA domain protein; PFAM: UspA domain-containing protein; SPTR: UspA domain protein; PFAM: Universal stress protein family
YP_004057962.1	COGs: COG0335 Ribosomal protein L19; InterPro IPR001857; KEGG: mrb:Mrub_1011 50S ribosomal protein L19; PFAM: ribosomal protein L19; SPTR: 50S ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type
YP_004057963.1	COGs: COG0336 tRNA-(guanine-N1)-methyltransferase; InterPro IPR002649: IPR016009; KEGG: msv:Mesil_2275 tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; PRIAM: tRNA (guanine-N(1)-)-methyltransferase; SPTR: tRNA (Guanine-N1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase
YP_004057964.1	COGs: COG0806 RimM protein required for 16S rRNA processing; InterPro IPR002676: IPR007903: IPR011961; KEGG: ttj:TTHA1033 16S rRNA-processing protein RimM; PFAM: PRC-barrel domain protein; RimM protein; SPTR: Ribosome maturation factor rimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: PRC-barrel domain; RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM
YP_004057965.1	InterPro IPR004088: IPR004044; KEGG: mrb:Mrub_1008 RNA-binding protein (KH domain); SPTR: RNA-binding protein (KH domain); PFAM: KH domain
YP_004057966.1	COGs: COG0228 Ribosomal protein S16; InterPro IPR000307; KEGG: ttj:TTHA1035 30S ribosomal protein S16; PFAM: ribosomal protein S16; SPTR: 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16
YP_004057967.1	COGs: COG0541 Signal recognition particle GTPase; InterProIPR001251: IPR003593: IPR013822: IPR000897: IPR 004125: IPR004780; KEGG: msv:Mesil_2279 signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; Signal peptide binding (SRP54) M- domain protein; SMART: AAA ATPase; SPTR: Signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein
YP_004057968.1	COGs: COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain); InterPro IPR000644: IPR006668: IPR006667: IPR006669; KEGG: tth:TTC0695 Mg(2+) transporter MgtE; PFAM: MgtE integral membrane region; CBS domain containing protein; MgtE intracellular region; SMART: CBS domain containing protein; SPTR: Magnesium transporter; TIGRFAM: magnesium transporter; PFAM: MgtE intracellular N domain; CBS domain; Divalent cation transporter; TIGRFAM: Mg2+ transporter (mgtE)
YP_004057969.1	KEGG: dra:DR_1139 hypothetical protein; SPTR: ADP-ribosylglycohydrolase; PFAM: Inorganic pyrophosphatase
YP_004057970.1	COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891; KEGG: ttj:TTHA1526 hydroxymethylglutaryl-CoA lyase like protein; PFAM: pyruvate carboxyltransferase; PRIAM: Hydroxymethylglutaryl-CoA lyase; SPTR: Hydroxymethylglutaryl-CoA lyase; PFAM: HMGL-like
YP_004057971.1	COGs: COG4799 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta); InterPro IPR011762: IPR011763: IPR000022; KEGG: ttj:TTHA1557 propionyl-CoA carboxylase, beta subunit; PFAM: carboxyl transferase; PRIAM: Methylcrotonoyl-CoA carboxylase; SPTR: Propionyl-CoA carboxylase, beta subunit; PFAM: Carboxyl transferase domain
YP_004057972.1	COGs: COG0525 Valyl-tRNA synthetase; InterProIPR002300: IPR013155: IPR019499: IPR001412: IPR 002303: IPR019754; KEGG: tth:TTC0805 valyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ia; tRNA synthetase valyl/leucyl anticodon-binding; Valyl-tRNA synthetase, class Ia, tRNA binding arm; SPTR: Valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase
YP_004057973.1	KEGG: msv:Mesil_2553 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004057974.1	COGs: COG4154 Fucose dissimilation pathway protein FucU; InterPro IPR007721; KEGG: pmo:Pmob_1603 RbsD or FucU transport; PFAM: RbsD or FucU transport; SPTR: RbsD or FucU transport; PFAM: RbsD / FucU transport protein family
YP_004057975.1	COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: cbi:CLJ_B1313 ribose ABC transporter permease RbsC; PFAM: inner-membrane translocator; SPTR: Ribose ABC transporter permease RbsC; PFAM: Branched-chain amino acid transport system / permease component
YP_004057976.1	COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: tro:trd_A0592 ribose import ATP-binding protein RbsA 1; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Ribose import ATP-binding protein RbsA 1; PFAM: ABC transporter
YP_004057977.1	COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR001761; KEGG: cbi:CLJ_B1315 D-ribose-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; SPTR: D-ribose-binding protein; PFAM: family
YP_004057978.1	COGs: COG0608 Single-stranded DNA-specific exonuclease; InterPro IPR001667: IPR003156: IPR017972: IPR004610; KEGG: msv:Mesil_2554 single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SPTR: Single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ
YP_004057979.1	KEGG: ttj:TTHA1166 hypothetical protein; SPTR: Putative uncharacterized protein TTHA1166
YP_004057980.1	COGs: COG0342 Preprotein translocase subunit SecD; InterPro IPR003335: IPR005791: IPR005665; KEGG: ttj:TTHA0697 bifunctional preprotein translocase subunit SecD/SecF; PFAM: SecD/SecF/SecDF export membrane protein; SPTR: Protein-export membrane protein SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF
YP_004057981.1	KEGG: ppa:PAS_FragB_0058 hypothetical protein; SPTR: Putative uncharacterized protein Nrg2
YP_004057982.1	COGs: COG0532 Translation initiation factor 2 (IF-2; GTPase); InterProIPR006847: IPR000795: IPR004161: IPR000178: IPR 005225; KEGG: ttj:TTHA0699 translation initiation factor IF-2; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain-containing protein; elongation factor Tu domain 2 protein; SPTR: Translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2
YP_004057983.1	COGs: COG0195 Transcription elongation factor; InterProIPR004088: IPR003029: IPR004087: IPR013735: IPR 010213; KEGG: msv:Mesil_1475 transcription termination factor NusA; PFAM: NusA domain-containing protein; RNA binding S1 domain protein; SPTR: Transcription termination factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: NusA N-terminal domain; S1 RNA binding domain; TIGRFAM: transcription termination factor NusA
YP_004057984.1	InterPro IPR003728: IPR020790; KEGG: msv:Mesil_1476 protein of unknown function DUF150; PFAM: protein of unknown function DUF150; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised BCR, YhbC family COG0779
YP_004057985.1	COGs: COG0266 Formamidopyrimidine-DNA glycosylase; InterProIPR000214: IPR012319: IPR015886: IPR010663: IPR 020629: IPR000191; KEGG: ttj:TTHA1806 formamidopyrimidine-DNA glycosylase; PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; Formamidopyrimidine-DNA glycosylase catalytic domain protein; PRIAM: DNA-formamidopyrimidine glycosylase; SPTR: Formamidopyrimidine-DNA glycosylase; TIGRFAM: formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg)
YP_004057986.1	COGs: COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; InterPro IPR006062; KEGG: msv:Mesil_2556 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein; PRIAM:1-(5-phosphoribosyl)-5-((5-phosphoribosylamin o)methylideneamino)imidazole-4-carboxamideisomerase; SPTR: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
YP_004057987.1	KEGG: tth:TTC1831 hypothetical protein; SPTR: Hypothetical membrane spanning protein
YP_004057988.1	InterPro IPR001845; KEGG: ttj:TTHA0156 hypothetical protein; PFAM: regulatory protein ArsR; SPTR: Transcriptional regulator, MarR family; PFAM: Bacterial regulatory protein, arsR family
YP_004057989.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: mrb:Mrub_1267 ABC transporter-like protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter; PFAM: ABC transporter
YP_004057990.1	InterPro IPR013525; KEGG: ttr:Tter_2608 ABC transporter; PFAM: ABC transporter; SPTR: ABC transporter; PFAM: ABC transporter
YP_004057991.1	KEGG: nth:Nther_0588 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: sodium pump decarboxylases, gamma subunit
YP_004057992.1	COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family; InterPro IPR006035: IPR014033: IPR005924; KEGG: mrb:Mrub_0850 arginase; PFAM: Arginase/agmatinase/formiminoglutamase; SPTR: Arginase; TIGRFAM: arginase; PFAM: Arginase family; TIGRFAM: arginase
YP_004057993.1	COGs: COG1399 metal-binding possibly nucleic acid-binding protein; InterPro IPR003772; KEGG: ttj:TTHA0419 hypothetical protein; PFAM: protein of unknown function DUF177; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized ACR, COG1399
YP_004057994.1	COGs: COG0333 Ribosomal protein L32; InterPro IPR002677; KEGG: ttj:TTHA0418 50S ribosomal protein L32; PFAM: ribosomal L32p protein; SPTR: 50S ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32
YP_004057995.1	COGs: COG0332 3-oxoacyl-(acyl-carrier-protein); InterPro IPR013751: IPR013747: IPR004655; KEGG: ttj:TTHA0417 3-oxoacyl-[acyl carrier protein] synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase III; SPTR: 3-oxoacyl-[acyl-carrier-protein] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III
YP_004057996.1	COGs: COG0331 (acyl-carrier-protein) S-malonyltransferase; InterPro IPR014043: IPR004410; KEGG: ttj:TTHA0416 malonyl CoA-[acyl carrier protein] transacylase; PFAM: Acyl transferase; SPTR: Malonyl-CoA-[acyl-carrier-protein] transacylase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase
YP_004057997.1	COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterProIPR002198: IPR020904: IPR016160: IPR011284: IPR 002347; KEGG: msv:Mesil_2562 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: 3-oxoacyl-(Acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase
YP_004057998.1	COGs: COG0236 Acyl carrier protein; InterPro IPR009081: IPR006163: IPR006162: IPR003231; KEGG: msv:Mesil_2564 acyl carrier protein; PFAM: phosphopantetheine-binding; SPTR: Acyl carrier protein; TIGRFAM: acyl carrier protein; PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein
YP_004057999.1	COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR014030: IPR014031: IPR018201: IPR017568; KEGG: ttj:TTHA0413 3-oxoacyl-[acyl carrier protein] synthase II; PFAM: Beta-ketoacyl synthase; SPTR: 3-oxoacyl-(Acyl-carrier-protein) synthase 2; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II
YP_004058000.1	KEGG: msv:Mesil_1375 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3467)
YP_004058001.1	InterPro IPR004942; KEGG: mrb:Mrub_1151 roadblock/LC7 family protein; PFAM: Roadblock/LC7 family protein; SPTR: Roadblock/LC7 family protein; PFAM: Roadblock/LC7 domain
YP_004058002.1	KEGG: msv:Mesil_1377 roadblock/LC7 family protein; SPTR: Roadblock/LC7 family protein; PFAM: Roadblock/LC7 domain
YP_004058003.1	KEGG: dge:Dgeo_1018 roadblock/LC7 domain-contain protein; SPTR: Putative uncharacterized protein
YP_004058004.1	COGs: COG0353 Recombinational DNA repair protein (RecF pathway); InterPro IPR006154: IPR015967: IPR006171: IPR000093; KEGG: ttj:TTHA1600 recombination protein RecR; PFAM: Zinc finger C4-type, RecR; TOPRIM domain-containing protein; SMART: Toprim sub domain-containing protein; SPTR: Recombination protein recR; TIGRFAM: recombination protein RecR; PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR
YP_004058005.1	COGs: COG0718 conserved hypothetical protein; InterPro IPR004401; KEGG: msv:Mesil_1379 hypothetical protein; PFAM: Uncharacterised protein family UPF0133; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: DNA-binding protein, YbaB/EbfC family
YP_004058006.1	COGs: COG0113 Delta-aminolevulinic acid dehydratase; InterPro IPR001731; KEGG: ttj:TTHA1598 delta-aminolevulinic acid dehydratase; PFAM: delta-aminolevulinic acid dehydratase; PRIAM: Porphobilinogen synthase; SPTR: Delta-aminolevulinic acid dehydratase; manually curated; PFAM: Delta-aminolevulinic acid dehydratase
YP_004058007.1	KEGG: psp:PSPPH_1027 lipoprotein; SPTR: Lipoprotein, putative
YP_004058008.1	InterPro IPR017896: IPR017900; KEGG: tra:Trad_0877 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
YP_004058009.1	KEGG: tra:Trad_0879 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058010.1	COGs: COG0824 thioesterase; InterPro IPR006683; KEGG: ttj:TTHA1846 thioesterase; PFAM: thioesterase superfamily protein; SPTR: Thioesterase superfamily protein; PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family
YP_004058011.1	COGs: COG2827 endonuclease containing a URI domain; InterPro IPR000305; KEGG: cpc:Cpar_1954 excinuclease ABC C subunit domain protein; PFAM: Excinuclease ABC C subunit domain protein; SMART: Excinuclease ABC C subunit domain protein; SPTR: Excinuclease ABC C subunit domain protein; manually curated; PFAM: GIY-YIG catalytic domain
YP_004058012.1	KEGG: msv:Mesil_0985 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058013.1	KEGG: msv:Mesil_1340 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058014.1	COGs: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; InterPro IPR003607: IPR006674; KEGG: msv:Mesil_1339 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: Metal dependent phosphohydrolase; manually curated; PFAM: HD domain
YP_004058015.1	KEGG: ttj:TTHA1377 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated
YP_004058016.1	COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase; InterPro IPR001804: IPR019818; KEGG: msv:Mesil_1337 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; PRIAM: 3-isopropylmalate dehydrogenase; SPTR: 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; isopropylmalate/isohomocitrate dehydrogenases
YP_004058017.1	COGs: COG4972 Tfp pilus assembly protein ATPase PilM; InterPro IPR005883; KEGG: msv:Mesil_1336 type IV pilus assembly protein PilM; SPTR: Type IV pilus assembly protein PilM; TIGRFAM: type IV pilus assembly protein PilM; PFAM: Competence protein A; Cell division protein FtsA; TIGRFAM: type IV pilus assembly protein PilM
YP_004058018.1	InterPro IPR007813; KEGG: mrb:Mrub_2740 hypothetical protein; PFAM: Fimbrial assembly family protein; SPTR: Putative uncharacterized protein; PFAM: Fimbrial assembly protein (PilN)
YP_004058019.1	InterPro IPR019677; KEGG: mrb:Mrub_2741 hypothetical protein; PFAM: General secretion pathway protein M; SPTR: Putative uncharacterized protein; PFAM: General secretion pathway protein M
YP_004058020.1	KEGG: mrb:Mrub_2742 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058021.1	COGs: COG1450 Type II secretory pathway component PulD; InterPro IPR005644: IPR004846: IPR001775; KEGG: tth:TTC1017 competence protein PilQ; PFAM: type II and III secretion system protein; NolW domain protein; SPTR: Competence protein pilQ; PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein
YP_004058022.1	COGs: COG0082 Chorismate synthase; InterPro IPR000453: IPR020541; KEGG: ttj:TTHA1384 chorismate synthase; PFAM: chorismate synthase; PRIAM: Chorismate synthase; SPTR: Chorismate synthase; TIGRFAM: chorismate synthase; manually curated; PFAM: Chorismate synthase; TIGRFAM: chorismate synthase
YP_004058023.1	COGs: COG0703 Shikimate kinase; InterPro IPR000623; KEGG: ttj:TTHA1385 shikimate kinase; PFAM: shikimate kinase; PRIAM: Shikimate kinase; SPTR: Shikimate kinase; PFAM: Shikimate kinase
YP_004058024.1	COGs: COG0337 3-dehydroquinate synthetase; InterPro IPR016303: IPR002658; KEGG: tth:TTC1020 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; PRIAM: 3-dehydroquinate synthase; SPTR: 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase
YP_004058025.1	COGs: COG0757 3-dehydroquinate dehydratase II; InterPro IPR001874: IPR018509; KEGG: ttj:TTHA1354 3-dehydroquinate dehydratase; PFAM: dehydroquinase class II; PRIAM: 3-dehydroquinate dehydratase; SPTR: 3-dehydroquinate dehydratase; TIGRFAM: 3-dehydroquinate dehydratase, type II; PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II
YP_004058026.1	COGs: COG0247 Fe-S oxidoreductase; InterPro IPR012257: IPR017896: IPR004017: IPR017900; KEGG: ttr:Tter_0568 protein of unknown function DUF224 cysteine-rich region domain protein; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: Putative uncharacterized protein; PFAM: Cysteine-rich domain
YP_004058027.1	InterPro IPR001763; KEGG: msv:Mesil_2271 rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: Rhodanese domain protein; PFAM: Rhodanese-like domain
YP_004058028.1	COGs: COG0497 ATPase involved in DNA repair; InterPro IPR003593: IPR003395: IPR004604; KEGG: msv:Mesil_1325 DNA repair protein RecN; PFAM: SMC domain protein; SMART: AAA ATPase; SPTR: DNA repair protein RecN; TIGRFAM: DNA repair protein RecN; PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN
YP_004058029.1	COGs: COG1380 Putative effector of murein hydrolase LrgA; InterPro IPR005538; KEGG: bbr:BB3336 integral membrane protein; PFAM: LrgA family protein; SPTR: Putative integral membrane protein; PFAM: LrgA family
YP_004058030.1	COGs: COG1346 Putative effector of murein hydrolase; InterPro IPR007300; KEGG: rrs:RoseRS_3283 LrgB family protein; PFAM: LrgB family protein; SPTR: LrgB family protein; PFAM: LrgB-like family
YP_004058031.1	COGs: COG0178 Excinuclease ATPase subunit; InterPro IPR003439: IPR003593: IPR017871: IPR004602; KEGG: ttj:TTHA1440 excinuclease ABC subunit A; PFAM: ABC transporter related; SPTR: UvrABC system protein A; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit
YP_004058032.1	COGs: COG0263 Glutamate 5-kinase; InterProIPR011529: IPR002478: IPR001048: IPR019797: IPR 005715: IPR001057; KEGG: mrb:Mrub_1080 glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; SMART: PUA domain containing protein; SPTR: Glutamate 5-kinase; TIGRFAM: glutamate 5-kinase; PFAM: Amino acid kinase family; PUA domain; TIGRFAM: glutamate 5-kinase
YP_004058033.1	COGs: COG0014 Gamma-glutamyl phosphate reductase; InterPro IPR012134: IPR015590: IPR020593: IPR000965; KEGG: mrb:Mrub_1079 gamma-glutamyl phosphate reductase; PFAM: Aldehyde Dehydrogenase; SPTR: Gamma-glutamyl phosphate reductase; TIGRFAM: gamma-glutamyl phosphate reductase; PFAM: Aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase
YP_004058034.1	COGs: COG1295 membrane protein; InterPro IPR004664; KEGG: msv:Mesil_2672 ribonuclease BN; PFAM: ribonuclease BN; SPTR: Ribonuclease BN; PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN)
YP_004058035.1	COGs: COG1521 Putative transcriptional regulator protein; InterPro IPR004619; KEGG: ttj:TTHA1374 pantothenate kinase; PFAM: Bvg accessory factor; SPTR: Putative transcriptional acitvator, Baf family; TIGRFAM: transcriptional activator, Baf family; PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III
YP_004058036.1	KEGG: cmi:CMM_0430 hypothetical protein; SPTR: Hypothetical secreted protein, cell-surface protein
YP_004058037.1	COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: ttj:TTHA1641 GGDEF domain-containing protein; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF); TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_004058038.1	COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: rle:pRL110363 hypothetical protein; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; SPTR: Putative methionine lyase; PFAM: Cys/Met metabolism PLP-dependent enzyme
YP_004058039.1	KEGG: tga:TGAM_0987 hypothetical protein; SPTR: Trichohyalin, putative
YP_004058040.1	COGs: COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component; InterPro IPR003439: IPR017871: IPR010230; KEGG: ttj:TTHA1838 SufC protein ATP-binding protein; PFAM: ABC transporter related; SPTR: SufC protein (ATP-binding protein); TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC
YP_004058041.1	COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR000825: IPR010231; KEGG: tth:TTC1488 ABC transporter ATP-binding protein; PFAM: SufBD protein; SPTR: ABC transporter ATP-binding protein; TIGRFAM: FeS assembly protein SufB; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB
YP_004058042.1	COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR000825: IPR011542; KEGG: ttj:TTHA1840 SufD protein membrane protein; PFAM: SufBD protein; SPTR: ABC transporter ATP-binding protein; TIGRFAM: FeS assembly protein SufD; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD, group 1
YP_004058043.1	COGs: COG0520 Selenocysteine lyase; InterPro IPR000192: IPR010970; KEGG: ttj:TTHA1735 iron-sulfur cluster biosynthesis protein IscS (cysteine desulfurase); PFAM: aminotransferase class V; SPTR: Cysteine desulfhydrase/selenocysteine lyase; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufS subfamily
YP_004058044.1	COGs: COG0822 NifU homolog involved in Fe-S cluster formation; InterPro IPR002871: IPR011341; KEGG: mrb:Mrub_2313 SUF system FeS assembly protein; PFAM: nitrogen-fixing NifU domain protein; SPTR: SUF system FeS assembly protein, NifU family; TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: NifU-like N terminal domain; TIGRFAM: SUF system FeS assembly protein, NifU family
YP_004058045.1	KEGG: ttj:TTHA1737 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058046.1	COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073: IPR000639; KEGG: mrb:Mrub_0636 alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold
YP_004058047.1	KEGG: ptm:GSPATT00001640001 hypothetical protein; SPTR: Trigger factor
YP_004058048.1	COGs: COG3947 Response regulator containing CheY-like receiver and SARP domains; InterPro IPR000014: IPR003018: IPR001867: IPR005158; KEGG: msv:Mesil_0253 response regulator receiver and SARP domain protein; PFAM: transcriptional activator domain; GAF domain protein; transcriptional regulator domain-containing protein; SMART: GAF domain protein; SPTR: Response regulator receiver and SARP domain protein; PFAM: GAF domain; Bacterial transcriptional activator domain; Transcriptional regulatory protein, C terminal
YP_004058049.1	InterPro IPR009056: IPR003088; KEGG: msv:Mesil_0251 cytochrome c class I; PFAM: cytochrome c class I; SPTR: Periplasmic cytochrome C; PFAM: Cytochrome c
YP_004058050.1	COGs: COG5013 Nitrate reductase alpha subunit; InterPro IPR006656: IPR006657: IPR006655: IPR006468; KEGG: msv:Mesil_0250 nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; PRIAM: Nitrate reductase; SPTR: Nitrate reductase alpha subunit; TIGRFAM: nitrate reductase, alpha subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: respiratory nitrate reductase, alpha subunit
YP_004058051.1	COGs: COG1140 Nitrate reductase beta subunit; InterPro IPR017896: IPR006547; KEGG: msv:Mesil_0249 nitrate reductase, beta subunit; SPTR: Nitrate reductase beta subunit; TIGRFAM: nitrate reductase, beta subunit; TIGRFAM: nitrate reductase, beta subunit
YP_004058052.1	COGs: COG2180 Nitrate reductase delta subunit; InterPro IPR020945: IPR003765; KEGG: msv:Mesil_0248 nitrate reductase molybdenum cofactor assembly chaperone; PFAM: TorD-like chaperone; SPTR: Chaperone protein; TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase delta subunit; TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone
YP_004058053.1	COGs: COG2181 Nitrate reductase gamma subunit; InterPro IPR003816; KEGG: msv:Mesil_0247 respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase gamma subunit; SPTR: Respiratory nitrate reductase, gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit
YP_004058054.1	COGs: COG2223 Nitrate/nitrite transporter; InterPro IPR011701; KEGG: fpl:Ferp_0315 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily
YP_004058055.1	COGs: COG0240 Glycerol-3-phosphate dehydrogenase; InterPro IPR006168: IPR011128: IPR006109; KEGG: mrb:Mrub_2574 glycerol-3-phosphate dehydrogenase (NAD(P)(+)); PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; SPTR: Glycerol-3-phosphate dehydrogenase; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
YP_004058056.1	KEGG: mrb:Mrub_2573 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058057.1	COGs: COG0461 Orotate phosphoribosyltransferase; InterPro IPR000836: IPR006273; KEGG: tth:TTC1380 orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; SPTR: Orotate phosphoribosyltransferase; TIGRFAM: orotate phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase, Thermus family; orotate phosphoribosyltransferase
YP_004058058.1	COGs: COG0284 Orotidine-5'-phosphate decarboxylase; InterPro IPR001754: IPR018089: IPR011995; KEGG: msv:Mesil_2713 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; PRIAM: Orotidine-5'-phosphate decarboxylase; SPTR: Orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 2
YP_004058059.1	KEGG: sti:Sthe_0738 ABC transporter; SPTR: Putative uncharacterized protein
YP_004058060.1	KEGG: gau:GAU_1383 nitrous oxidase accessory protein NosL; SPTR: Putative uncharacterized protein; PFAM: NosL; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_004058061.1	InterPro IPR017909: IPR006311; KEGG: rpf:Rpic12D_4177 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: NosL
YP_004058062.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: ade:Adeh_2399 ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter
YP_004058063.1	COGs: COG3420 Nitrous oxidase accessory protein; InterPro IPR006626; KEGG: gau:GAU_1382 nitrous oxidase accessory protein NosD; SPTR: Nitrous oxidase accessory protein-like protein; TIGRFAM: parallel beta-helix repeat (two copies)
YP_004058064.1	COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792: IPR001789; KEGG: sml:Smlt2299 response regulator protein LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: Putative response regulator protein LuxR family; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family
YP_004058065.1	COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594; KEGG: mpo:Mpop_3827 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SPTR: Integral membrane sensor signal transduction histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_004058066.1	COGs: COG2177 Cell division protein; InterPro IPR003838; KEGG: mrb:Mrub_0448 cell division protein FtsX; PFAM: protein of unknown function DUF214; SPTR: Cell division protein FtsX; PFAM: Predicted permease
YP_004058067.1	COGs: COG4942 Membrane-bound metallopeptidase; InterPro IPR016047; KEGG: mrb:Mrub_0447 peptidase M23; PFAM: Peptidase M23; SPTR: Peptidase M23; PFAM: Peptidase family M23
YP_004058068.1	COGs: COG1544 Ribosome-associated protein Y (PSrp-1); InterPro IPR003489; KEGG: mrb:Mrub_0410 sigma 54 modulation protein/30S ribosomal protein S30EA; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; SPTR: Sigma 54 modulation protein/ribosomal protein S30EA; TIGRFAM: ribosomal subunit interface protein; PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein
YP_004058069.1	COGs: COG2884 ATPase involved in cell division; InterPro IPR003439: IPR003593: IPR017871: IPR005286; KEGG: msv:Mesil_1421 cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Cell division ATP-binding protein FtsE; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter; TIGRFAM: cell division ATP-binding protein FtsE
YP_004058070.1	COGs: COG0793 Periplasmic protease; InterPro IPR001478: IPR005151: IPR004447; KEGG: msv:Mesil_1420 carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; SPTR: Carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc)
YP_004058071.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: msv:Mesil_1419 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter; PFAM: ABC transporter
YP_004058072.1	KEGG: mrb:Mrub_0832 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058073.1	KEGG: msv:Mesil_2420 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3197)
YP_004058074.1	COGs: COG1410 Methionine synthase I cobalamin-binding domain; InterProIPR011822: IPR003726: IPR000489: IPR004223: IPR 006158: IPR003759; KEGG: ttj:TTHA0618 5-methyltetrahydrofolate homocysteine S-methyltransferase; PFAM: homocysteine S-methyltransferase; dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; Vitamin B12 dependent methionine synthase activation region; SPTR: 5-methyltetrahydrofolate homocysteine S-methyltransferase; TIGRFAM: methionine synthase; PFAM: Pterin binding enzyme; Vitamin B12 dependent methionine synthase, activation domain; B12 binding domain; Homocysteine S-methyltransferase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; methylmalonyl-CoA mutase C-terminal domain
YP_004058075.1	COGs: COG2827 endonuclease containing a URI domain; InterPro IPR000305; KEGG: nmn:NMCC_0047 endonuclease; PFAM: Excinuclease ABC C subunit domain protein; SMART: Excinuclease ABC C subunit domain protein; SPTR: Putative uncharacterized protein; PFAM: GIY-YIG catalytic domain
YP_004058076.1	KEGG: msv:Mesil_2523 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058077.1	KEGG: tte:TTE0930 SatD; SPTR: SatD
YP_004058078.1	COGs: COG0535 Fe-S oxidoreductase; InterPro IPR017200: IPR006638: IPR007197; KEGG: sus:Acid_7329 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Putative uncharacterized protein nirJ; PFAM: Radical SAM superfamily
YP_004058079.1	COGs: COG1569 nucleic acid-binding protein contains PIN domain; InterPro IPR002850; KEGG: afo:Afer_1868 PilT protein domain protein; SPTR: PilT protein domain protein; TIGRFAM: probable toxin-antitoxin system toxin component, PIN family
YP_004058080.1	KEGG: nhl:Nhal_0622 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058081.1	COGs: COG1466 DNA polymerase III delta subunit; InterPro IPR010372: IPR005790; KEGG: msv:Mesil_2524 DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; SPTR: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit
YP_004058082.1	COGs: COG0312 Zn-dependent protease and their inactivated homologs; InterPro IPR002510; KEGG: mrb:Mrub_2383 peptidase U62 modulator of DNA gyrase; PFAM: peptidase U62 modulator of DNA gyrase; SPTR: Peptidase U62 modulator of DNA gyrase; PFAM: Putative modulator of DNA gyrase
YP_004058083.1	COGs: COG0312 Zn-dependent protease and their inactivated homologs; InterPro IPR002510; KEGG: mrb:Mrub_2382 peptidase U62 modulator of DNA gyrase; PFAM: peptidase U62 modulator of DNA gyrase; SPTR: Peptidase U62 modulator of DNA gyrase; PFAM: Putative modulator of DNA gyrase
YP_004058084.1	COGs: COG2355 Zn-dependent dipeptidase microsomal dipeptidase homolog; InterPro IPR008257; KEGG: msv:Mesil_2534 peptidase M19 renal dipeptidase; PFAM: peptidase M19 renal dipeptidase; SPTR: Peptidase M19 renal dipeptidase; PFAM: Membrane dipeptidase (Peptidase family M19)
YP_004058085.1	KEGG: hoh:Hoch_2152 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058086.1	COGs: COG1394 H+-ATPase subunit D; InterPro IPR002699; KEGG: ttj:TTHA1271 V-type ATP synthase subunit D; PFAM: H+transporting two-sector ATPase D subunit; SPTR: V-type ATP synthase subunit D; TIGRFAM: V-type ATPase, D subunit; PFAM: ATP synthase subunit D; TIGRFAM: H(+)-transporting ATP synthase, vacuolar type, subunit D
YP_004058087.1	COGs: COG1156 H+-ATPase subunit B; InterPro IPR004100: IPR000194: IPR000793: IPR020003; KEGG: ttj:TTHA1272 V-type ATP synthase subunit B; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SPTR: H+transporting two-sector ATPase alpha/beta subunit central region; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain
YP_004058088.1	COGs: COG1155 H+-ATPase subunit A; InterPro IPR004100: IPR000194: IPR000793: IPR020003; KEGG: tth:TTC0907 V-type ATP synthase subunit A; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; PRIAM: Sodium-transporting two-sector ATPase; SPTR: V-type ATP synthase alpha chain; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain
YP_004058089.1	InterPro IPR008218; KEGG: msv:Mesil_1452 vacuolar H+transporting two-sector ATPase F subunit; PFAM: Vacuolar H+transporting two-sector ATPase F subunit; SPTR: Vacuolar H+transporting two-sector ATPase F subunit; PFAM: ATP synthase (F/14-kDa) subunit
YP_004058090.1	COGs: COG1527 H+-ATPase subunit C; InterPro IPR002843; KEGG: msv:Mesil_1451 H+transporting two-sector ATPase C (AC39) subunit; PFAM: H+transporting two-sector ATPase C (AC39) subunit; SPTR: H+transporting two-sector ATPase C (AC39) subunit; PFAM: ATP synthase (C/AC39) subunit
YP_004058091.1	COGs: COG1390 H+-ATPase subunit E; InterPro IPR002842; KEGG: ttj:TTHA1276 V-type ATP synthase subunit E; PFAM: H+transporting two-sector ATPase E subunit; SPTR: V-type ATP synthase subunit E; PFAM: ATP synthase (E/31 kDa) subunit
YP_004058092.1	InterPro IPR002379: IPR000454: IPR000245; KEGG: ttj:TTHA1277 V-type ATP synthase, subunit K; PFAM: H+transporting two-sector ATPase C subunit; SPTR: H+transporting two-sector ATPase C subunit; PFAM: ATP synthase subunit C
YP_004058093.1	COGs: COG1269 H+-ATPase subunit I; InterPro IPR002490; KEGG: tth:TTC0912 V-type sodium ATP synthase subunit I; PFAM: V-type ATPase 116 kDa subunit; SPTR: V-type sodium ATP synthase subunit I; PFAM: V-type ATPase 116kDa subunit family
YP_004058094.1	KEGG: msv:Mesil_1447 V-type ATP synthase, subunit (VapC-therm); SPTR: V-type ATP synthase, subunit (VapC-therm)
YP_004058095.1	COGs: COG1092 SAM-dependent methyltransferase; InterPro IPR007848; KEGG: mrb:Mrub_0954 SAM-dependent methyltransferase; PFAM: methyltransferase small; SPTR: SAM-dependent methyltransferase; PFAM: S-adenosylmethionine-dependent methyltransferase
YP_004058096.1	KEGG: ttj:TTHA1281 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3248)
YP_004058097.1	KEGG: msv:Mesil_1444 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058098.1	COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; KEGG: ttj:TTHA1283 metal-dependent hydrolase; SPTR: UPF0173 metal-dependent hydrolase TT_C0917; PFAM: Metallo-beta-lactamase superfamily
YP_004058099.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR020635: IPR002290: IPR017442: IPR 017441: IPR008271; KEGG: mrb:Mrub_2221 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain
YP_004058100.1	COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR000873: IPR020845; KEGG: msv:Mesil_1441 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: AMP-dependent synthetase and ligase; PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetoacetyl-CoA synthase
YP_004058101.1	KEGG: cpc:Cpar_1833 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF123
YP_004058102.1	InterPro IPR017441; KEGG: mcc:702238 retinitis pigmentosa 1-like 1; SPTR: TPR repeat-containing protein
YP_004058103.1	KEGG: sgr:SGR_759 secreted serine protease; SPTR: Putative uncharacterized protein
YP_004058104.1	COGs: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; InterPro IPR004839; KEGG: rsc:RCFBP_20493 transcriptional regulators containing a dna-binding hth domain and an aminotransferase domain transcription regulator protein; PFAM: aminotransferase class I and II; SPTR: Aminotransferase, classIand II; protein; PFAM: Aminotransferase class I and II
YP_004058105.1	COGs: COG0708 Exonuclease III; InterPro IPR004808: IPR005135: IPR020848: IPR000097; KEGG: abi:Aboo_0823 exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SPTR: Exodeoxyribonuclease III; TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth)
YP_004058106.1	COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR013027; KEGG: tga:TGAM_1235 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Putative dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase
YP_004058107.1	InterPro IPR012440; KEGG: tga:TGAM_1236 hypothetical protein; PFAM: protein of unknown function DUF1641; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1641)
YP_004058108.1	KEGG: mpl:Mpal_2277 hypothetical protein; SPTR: Putative outermembrane protein (Modular protein)
YP_004058109.1	KEGG: hma:rrnAC0082 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058110.1	InterPro IPR000421; KEGG: tps:THAPSDRAFT_25535 hypothetical protein; PFAM: coagulation factor 5/8 type domain protein; SPTR: Predicted protein; PFAM: F5/8 type C domain
YP_004058111.1	COGs: COG1397 ADP-ribosylglycohydrolase; InterPro IPR005502; KEGG: gau:GAU_0189 hydrolase; PFAM: ADP-ribosylation/Crystallin J1; SPTR: Putative hydrolase; PFAM: ADP-ribosylglycohydrolase
YP_004058112.1	COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; InterProIPR020058: IPR020059: IPR018027: IPR001412: IPR 004514: IPR020060; KEGG: mrb:Mrub_1755 glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain; Asn/Gln amidotransferase; SPTR: Glutaminyl-tRNA synthetase; TIGRFAM: glutaminyl-tRNA synthetase; PFAM: tRNA synthetases class I (E and Q), catalytic domain; tRNA synthetases class I (E and Q), anti-codon binding domain; GatB domain; TIGRFAM: glutaminyl-tRNA synthetase
YP_004058113.1	InterPro IPR013509: IPR000788: IPR013344; KEGG: mrb:Mrub_2091 ribonucleoside-diphosphate reductase adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit domain protein; SPTR: Ribonucleoside-diphosphate reductase; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: Ribonucleotide reductase, all-alpha domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
YP_004058114.1	COGs: COG0366 Glycosidase; InterPro IPR006589: IPR006047; KEGG: ttj:TTHA1563 (neo)pullulanase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Alpha amylase catalytic region; PFAM: Alpha amylase, catalytic domain
YP_004058115.1	COGs: COG0194 Guanylate kinase; InterPro IPR008144: IPR008145: IPR020590: IPR017665; KEGG: ttj:TTHA1562 guanylate kinase; PFAM: guanylate kinase; PRIAM: Guanylate kinase; SMART: guanylate kinase/L-type calcium channel region; SPTR: Guanylate kinase; TIGRFAM: guanylate kinase; manually curated; PFAM: Guanylate kinase; TIGRFAM: guanylate kinase
YP_004058116.1	InterPro IPR006110: IPR003716; KEGG: msv:Mesil_1320 DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; SPTR: DNA-directed RNA polymerase, omega subunit; TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; TIGRFAM: DNA-directed RNA polymerase, omega subunit
YP_004058117.1	COGs: COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase; InterPro IPR003382: IPR007085: IPR005252; KEGG: ttj:TTHA1560 DNA/pantothenate metabolism flavoprotein; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein; PRIAM: Phosphopantothenate--cysteine ligase; SPTR: DNA/pantothenate metabolism flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; manually curated; PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic
YP_004058118.1	COGs: COG1438 Arginine repressor; InterPro IPR020899: IPR001669; KEGG: msv:Mesil_1321 arginine repressor, ArgR; PFAM: Arginine repressor-like; SPTR: Arginine repressor, ArgR; TIGRFAM: arginine repressor; PFAM: Arginine repressor, C-terminal domain; Arginine repressor, DNA binding domain; TIGRFAM: arginine repressor
YP_004058119.1	COGs: COG2095 Multiple antibiotic transporter; InterPro IPR002771; KEGG: ttj:TTHA1558 MarC family integral membrane protein; PFAM: multiple antibiotic resistance (MarC)-related protein; SPTR: Multiple antibiotic resistance protein marC; PFAM: MarC family integral membrane protein; TIGRFAM: membrane protein, MarC family
YP_004058120.1	COGs: COG0083 Homoserine kinase; InterProIPR000870: IPR006204: IPR013750: IPR006203: IPR 000183; KEGG: ttj:TTHA1394 homoserine kinase; PFAM: GHMP kinase; GHMP kinase domain protein; SPTR: Homoserine kinase; TIGRFAM: homoserine kinase; PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: homoserine kinase
YP_004058121.1	KEGG: msv:Mesil_0949 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058122.1	InterPro IPR001647; KEGG: msv:Mesil_2584 transcriptional regulator, TetR family; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family
YP_004058123.1	COGs: COG0350 Methylated DNA-protein cysteine methyltransferase; InterPro IPR014048; KEGG: ttj:TTHA1564 methylated-DNA--protein-cysteine methyltransferase (Ogt); PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; SPTR: Putative methylated-DNA--protein-cysteine methyltransferase (Ogt); TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase
YP_004058124.1	COGs: COG0123 Deacetylase including yeast histone deacetylase and acetoin utilization protein; InterPro IPR000286: IPR003085; KEGG: msv:Mesil_0963 histone deacetylase; PFAM: histone deacetylase superfamily; PRIAM: Histone deacetylase; SPTR: Histone deacetylase superfamily; PFAM: Histone deacetylase domain
YP_004058125.1	COGs: COG0517 FOG: CBS domain; InterPro IPR000644: IPR002912; KEGG: ttj:TTHA0474 acetoin utilization protein AcuB (acetoin dehydrogenase); PFAM: CBS domain containing protein; amino acid-binding ACT domain protein; SMART: CBS domain containing protein; SPTR: Acetoin utilization acuB protein; PFAM: CBS domain; ACT domain
YP_004058126.1	InterPro IPR000182; KEGG: bts:Btus_0597 acetoin dehydrogenase AcuA; PFAM: GCN5-related N-acetyltransferase; SPTR: Acetoin dehydrogenase AcuA; PFAM: Acetyltransferase (GNAT) family
YP_004058127.1	COGs: COG1977 Molybdopterin converting factor small subunit; InterPro IPR003749: IPR015272: IPR010038; KEGG: ttj:TTHA0151 molybdopterin converting factor, subunit 1 (MoaD); PFAM: thiamineS protein; protein of unknown function DUF1952; SPTR: Molybdopterin converting factor, subunit 1 (MoaD); TIGRFAM: MoaD family protein; PFAM: ThiS family; Domain of unknown function (DUF1952); TIGRFAM: MoaD family protein, archaeal
YP_004058128.1	KEGG: ttj:TTHA1523 hypothetical protein; SPTR: Tetrathionate reductase subunit C
YP_004058129.1	COGs: COG0112 Glycine/serine hydroxymethyltransferase; InterPro IPR001085: IPR019798; KEGG: ttj:TTHA1524 serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase; PRIAM: Glycine hydroxymethyltransferase; SPTR: Serine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase
YP_004058130.1	COGs: COG1160 GTPase; InterPro IPR016484: IPR003593: IPR002917: IPR005225; KEGG: msv:Mesil_0953 ribosome-associated GTPase EngA; PFAM: GTP-binding protein HSR1-related; SMART: AAA ATPase; SPTR: Ribosome-associated GTPase EngA; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein; PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain
YP_004058131.1	COGs: COG0846 NAD-dependent protein deacetylase SIR2 family; InterPro IPR003000; KEGG: msv:Mesil_0952 silent information regulator protein Sir2; PFAM: Silent information regulator protein Sir2; SPTR: Silent information regulator protein Sir2; manually curated; PFAM: Sir2 family
YP_004058132.1	COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR003148: IPR006037: IPR013099; KEGG: rmr:Rmar_2039 TrkA-N domain protein; PFAM: TrkA-N domain protein; Ion transport 2 domain protein; TrkA-C domain protein; SPTR: TrkA-N domain protein; PFAM: TrkA-N domain; Ion channel; TrkA-C domain
YP_004058133.1	COGs: COG0063 sugar kinase; InterPro IPR000631: IPR004443: IPR017953; KEGG: msv:Mesil_0951 carbohydrate kinase, YjeF related protein; PFAM: YjeF-family domain-containing protein; protein of unknown function UPF0031; SPTR: Carbohydrate kinase, YjeF related protein; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: YjeF-related protein N-terminus; Carbohydrate kinase; TIGRFAM: yjeF C-terminal region, hydroxyethylthiazole kinase-related; yjeF N-terminal region
YP_004058134.1	KEGG: ttj:TTHA1457 S-adenosylmethionine decarboxylase proenzyme; SPTR: S-adenosylmethionine decarboxylase related
YP_004058135.1	InterPro IPR000701: IPR014314; KEGG: ttj:TTHA1456 succinate dehydrogenase, cytochrome subunit; PFAM: succinate dehydrogenase cytochrome b subunit; SPTR: Succinate dehydrogenase, cytochrome b556 subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit
YP_004058136.1	COGs: COG2142 Succinate dehydrogenase hydrophobic anchor subunit; InterPro IPR000701: IPR014312; KEGG: ttj:TTHA1455 succinate dehydrogenase, membrane subunit (SdhD); PFAM: succinate dehydrogenase cytochrome b subunit; SPTR: Putative membrane anchor of succinate dehydrogenase; TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein
YP_004058137.1	COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterProIPR003953: IPR004112: IPR003952: IPR011281: IPR 014006: IPR013027; KEGG: ttj:TTHA1454 succinate dehydrogenase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: Succinate dehydrogenase, flavoprotein subunit; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
YP_004058138.1	COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterProIPR001041: IPR017896: IPR006058: IPR017900: IPR 017907: IPR004489; KEGG: tth:TTC1089 succinate dehydrogenase iron-sulfur subunit; PFAM: ferredoxin; PRIAM: Succinate dehydrogenase; SPTR: Succinate dehydrogenase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein
YP_004058139.1	COGs: COG0693 Putative intracellular protease/amidase; InterPro IPR006286: IPR002818; KEGG: dma:DMR_15560 PfpI family peptidase; PFAM: ThiJ/PfpI domain-containing protein; SPTR: Putative PfpI family peptidase; TIGRFAM: intracellular protease, PfpI family; PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease, PfpI family
YP_004058140.1	COGs: COG0218 GTPase; InterPro IPR001401: IPR005225; KEGG: msv:Mesil_1439 dynamin family protein; PFAM: Dynamin family protein; SPTR: Dynamin family protein; TIGRFAM: small GTP-binding protein; PFAM: Dynamin family; TIGRFAM: small GTP-binding protein domain
YP_004058141.1	KEGG: mfa:Mfla_2709 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058142.1	InterPro IPR002104; KEGG: sti:Sthe_2831 integrase family protein; PFAM: integrase family protein; SPTR: ORF39; PFAM: Phage integrase family
YP_004058143.1	KEGG: mrb:Mrub_0621 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058144.1	KEGG: msv:Mesil_2761 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058145.1	COGs: COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase); InterPro IPR002813; KEGG: ttj:TTHA1196 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein; PFAM: arginine biosynthesis protein ArgJ; PRIAM: Amino-acid N-acetyltransferase; SPTR: Arginine biosynthesis bifunctional protein ArgJ; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase
YP_004058146.1	COGs: COG0002 Acetylglutamate semialdehyde dehydrogenase; InterPro IPR000706: IPR000534: IPR012280; KEGG: ttj:TTHA1197 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; PRIAM: N-acetyl-gamma-glutamyl-phosphate reductase; SPTR: N-acetyl-gamma-glutamyl-phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form
YP_004058147.1	COGs: COG0078 Ornithine carbamoyltransferase; InterPro IPR006132: IPR006131: IPR002292: IPR006130; KEGG: ttj:TTHA1199 ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; PRIAM: Ornithine carbamoyltransferase; SPTR: Ornithine carbamoyltransferase; TIGRFAM: ornithine carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase
YP_004058148.1	InterPro IPR000835; KEGG: msv:Mesil_2811 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: Transcriptional regulator, MarR family; PFAM: MarR family
YP_004058149.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR011701: IPR001411: IPR004638; KEGG: tth:TTC0625 multidrug resistance protein B; PFAM: major facilitator superfamily MFS_1; SPTR: Multidrug resistance protein B; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily
YP_004058150.1	COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: ttj:TTHA1200 hypothetical protein; PFAM: LmbE family protein; SPTR: Putative uncharacterized protein TTHA1200; PFAM: GlcNAc-PI de-N-acetylase
YP_004058151.1	COGs: COG0344 membrane protein; InterPro IPR003811: IPR020788; KEGG: tth:TTC0841 membrane protein; PFAM: protein of unknown function DUF205; SPTR: Glycerol-3-phosphate acyltransferase; PFAM: Domain of unknown function (DUF205); TIGRFAM: acyl-phosphate glycerol 3-phosphate acyltransferase
YP_004058152.1	COGs: COG3694 ABC-type uncharacterized transport system permease component; InterPro IPR010390; KEGG: naz:Aazo_1498 hypothetical protein; PFAM: protein of unknown function DUF990; SPTR: Putative uncharacterized protein; manually curated; PFAM: Protein of unknown function (DUF990)
YP_004058153.1	COGs: COG4587 ABC-type uncharacterized transport system permease component; InterPro IPR010390; KEGG: amr:AM1_5752 ABC transporter permease protein; PFAM: protein of unknown function DUF990; SPTR: ABC transporter permease protein; PFAM: Protein of unknown function (DUF990)
YP_004058154.1	COGs: COG4586 ABC-type uncharacterized transport system ATPase component; InterPro IPR017871: IPR003439: IPR003593; KEGG: msv:Mesil_2818 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter; PFAM: ABC transporter
YP_004058155.1	COGs: COG2096 conserved hypothetical protein; InterPro IPR002779: IPR017858; KEGG: mrb:Mrub_2492 ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; PRIAM: Cob(I)yrinic acid a,c-diamide adenosyltransferase; SPTR: ATP/cobalamin adenosyltransferase; TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: Cobalamin adenosyltransferase; TIGRFAM: ATP:cob(I)alamin adenosyltransferase
YP_004058156.1	COGs: COG0787 Alanine racemase; InterPro IPR020622: IPR001608: IPR011079: IPR000821; KEGG: mrb:Mrub_0203 alanine racemase; PFAM: alanine racemase domain protein; PRIAM: Alanine racemase; SPTR: Alanine racemase; TIGRFAM: alanine racemase; PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase
YP_004058157.1	COGs: COG3603 conserved hypothetical protein; InterPro IPR016540; KEGG: hoh:Hoch_3142 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058158.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: mrb:Mrub_0374 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family
YP_004058159.1	COGs: COG2041 Sulfite oxidase; InterPro IPR016130: IPR000572; KEGG: msv:Mesil_3000 oxidoreductase molybdopterin binding protein; PFAM: oxidoreductase molybdopterin binding; SPTR: Oxidoreductase molybdopterin binding protein; PFAM: Oxidoreductase molybdopterin binding domain
YP_004058160.1	COGs: COG3971 2-keto-4-pentenoate hydratase; InterPro IPR002529; KEGG: dar:Daro_4183 hydratase/decarboxylase; PFAM: fumarylacetoacetate (FAA) hydrolase; SPTR: Hydratase/decarboxylase; PFAM: Fumarylacetoacetate (FAA) hydrolase family
YP_004058161.1	COGs: COG1993 conserved hypothetical protein; InterPro IPR003793; KEGG: mrb:Mrub_2472 hypothetical protein; PFAM: protein of unknown function DUF190; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized ACR, COG1993
YP_004058162.1	COGs: COG0239 Integral membrane protein possibly involved in chromosome condensation; InterPro IPR003691; KEGG: tth:TTC1648 integral membrane protein; PFAM: Camphor resistance CrcB protein; SPTR: Protein crcB homolog; TIGRFAM: CrcB protein; manually curated; PFAM: CrcB-like protein; TIGRFAM: crcB protein
YP_004058163.1	InterPro IPR019809; KEGG: msv:Mesil_2367 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058164.1	InterPro IPR001120: IPR012902; KEGG: tra:Trad_1311 pilus assembly protein; SPTR: Putative pilus assembly protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004058165.1	InterPro IPR012902; KEGG: dge:Dgeo_2110 pilin, type IV; SPTR: Putative pilin, type IV; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004058166.1	InterPro IPR001120: IPR012902; KEGG: tra:Trad_1309 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004058167.1	COGs: COG0343 Queuine/archaeosine tRNA-ribosyltransferase; InterPro IPR002616: IPR004803; KEGG: tth:TTC1676 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; PRIAM: tRNA-guanine transglycosylase; SPTR: Queuine tRNA-ribosyltransferase; TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming
YP_004058168.1	COGs: COG2233 Xanthine/uracil permease; InterPro IPR006043: IPR006042; KEGG: tth:TTC1675 uracil permease; PFAM: Xanthine/uracil/vitamin C permease; SPTR: Uracil-xanthine permease; TIGRFAM: uracil-xanthine permease; PFAM: Permease family; TIGRFAM: uracil-xanthine permease
YP_004058169.1	COGs: COG2979 conserved hypothetical protein; InterPro IPR007486; KEGG: sat:SYN_00004 cytoplasmic protein; PFAM: protein of unknown function DUF533; SPTR: Hypothetical cytosolic protein; PFAM: Protein of unknown function (DUF533)
YP_004058170.1	InterPro IPR001440: IPR019734: IPR013026; KEGG: msv:Mesil_3096 tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide repeat
YP_004058171.1	COGs: COG0016 Phenylalanyl-tRNA synthetase alpha subunit; InterPro IPR004188: IPR002319: IPR006195: IPR004529; KEGG: tth:TTC1594 phenylalanyl-tRNA synthetase subunit alpha; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein; SPTR: Phenylalanyl-tRNA synthetase, alpha subunit; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit
YP_004058172.1	COGs: COG0072 Phenylalanyl-tRNA synthetase beta subunit; InterProIPR002547: IPR005146: IPR005147: IPR005121: IPR 004532; KEGG: mrb:Mrub_2673 phenylalanyl-tRNA synthetase subunit beta; PFAM: B3/4 domain protein; t-RNA-binding domain-containing protein; tRNA synthetase B5; ferredoxin-fold anticodon-binding; SPTR: Phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial
YP_004058173.1	COGs: COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis; InterPro IPR004588: IPR016425; KEGG: ttj:TTHA0305 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PFAM: IspG family protein; SPTR: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; manually curated; PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase
YP_004058174.1	InterPro IPR002035; KEGG: msv:Mesil_1570 von Willebrand factor type A; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: von Willebrand factor type A; PFAM: von Willebrand factor type A domain
YP_004058175.1	COGs: COG1404 Subtilisin-like serine protease; InterPro IPR000209; KEGG: msv:Mesil_1571 peptidase S8 and S53 subtilisin kexin sedolisin; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: Peptidase S8 and S53 subtilisin kexin sedolisin; PFAM: Subtilase family
YP_004058176.1	COGs: COG1404 Subtilisin-like serine protease; InterPro IPR000209: IPR000601; KEGG: ttj:TTHA0724 serine protease; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; PKD domain containing protein; SMART: PKD domain containing protein; SPTR: Serine protease; PFAM: PKD domain; Subtilase family
YP_004058177.1	COGs: COG0481 Membrane GTPase LepA; InterProIPR000795: IPR004161: IPR000640: IPR013842: IPR 006297: IPR005225; KEGG: msv:Mesil_2371 GTP-binding protein LepA; PFAM: GTP-binding protein LepA domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein; SPTR: GTP-binding protein LepA; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain
YP_004058178.1	KEGG: ddr:Deide_1p01732 conserved hypothetical protein, precursor; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3179)
YP_004058179.1	COGs: COG3033 Tryptophanase; InterPro IPR018176: IPR001597: IPR013441: IPR011166; KEGG: rca:Rcas_0866 tyrosine phenol-lyase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; PRIAM: Tyrosine phenol-lyase; SPTR: Tyrosine phenol-lyase; TIGRFAM: tyrosine phenol-lyase; PFAM: Beta-eliminating lyase; TIGRFAM: tyrosine phenol-lyase
YP_004058180.1	COGs: COG0316 conserved hypothetical protein; InterPro IPR000361: IPR016092; KEGG: msv:Mesil_2733 iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; SPTR: Iron-sulfur cluster assembly accessory protein; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein
YP_004058181.1	COGs: COG0018 Arginyl-tRNA synthetase; InterProIPR001412: IPR005148: IPR015945: IPR008909: IPR 001278; KEGG: msv:Mesil_2451 arginyl-tRNA synthetase; PFAM: DALR anticodon binding domain protein; arginyl tRNA synthetase domain protein; Arginyl-tRNA synthetase, class Ic, core; PRIAM: Arginine--tRNA ligase; SPTR: Arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase; PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase
YP_004058182.1	COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001254: IPR001940: IPR001478; KEGG: msv:Mesil_2452 PDZ/DHR/GLGF domain protein; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; SPTR: PDZ/DHR/GLGF domain protein
YP_004058183.1	COGs: COG1428 Deoxynucleoside kinase; InterPro IPR002624; KEGG: msv:Mesil_2453 deoxynucleoside kinase; PFAM: deoxynucleoside kinase; SPTR: Deoxynucleoside kinase; PFAM: Deoxynucleoside kinase
YP_004058184.1	COGs: COG1428 Deoxynucleoside kinase; InterPro IPR001977: IPR002624; KEGG: msv:Mesil_2454 deoxynucleoside kinase; PFAM: deoxynucleoside kinase; Dephospho-CoA kinase; SPTR: Deoxynucleoside kinase; PFAM: Deoxynucleoside kinase
YP_004058185.1	COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase; InterPro IPR000713: IPR013221: IPR004101: IPR005761; KEGG: mrb:Mrub_2503 UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; SPTR: UDP-N-acetylmuramyl-tripeptide synthetase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase
YP_004058186.1	COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310; KEGG: gym:GYMC10_2508 histidine triad (HIT) protein; PFAM: histidine triad (HIT) protein; SPTR: Histidine triad (HIT) protein; manually curated; PFAM: HIT domain
YP_004058187.1	KEGG: tth:TTC1897 hypothetical protein; SPTR: Hypothetical membrane spanning protein
YP_004058188.1	KEGG: ttj:TTHA0107 hypothetical protein; SPTR: Hypothetical membrane spanning protein
YP_004058189.1	COGs: COG0327 conserved hypothetical protein; InterPro IPR002678; KEGG: mrb:Mrub_2502 hypothetical protein; PFAM: protein of unknown function DUF34; SPTR: Putative uncharacterized protein; PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family
YP_004058190.1	COGs: COG0125 Thymidylate kinase; InterPro IPR018095: IPR000062: IPR018094; KEGG: mrb:Mrub_2501 thymidylate kinase; PFAM: thymidylate kinase; PRIAM: dTMP kinase; SPTR: Thymidylate kinase; TIGRFAM: thymidylate kinase; PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase
YP_004058191.1	COGs: COG1430 conserved hypothetical protein; InterPro IPR003795; KEGG: ttj:TTHA1608 hypothetical protein; PFAM: protein of unknown function DUF192; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized ACR, COG1430
YP_004058192.1	COGs: COG2331 conserved hypothetical protein; InterPro IPR013429; KEGG: ttj:TTHA1610 hypothetical protein; SPTR: Regulatory protein, FmdB family; TIGRFAM: regulatory protein, FmdB family; PFAM: Zinc ribbon domain; TIGRFAM: regulatory protein, FmdB family
YP_004058193.1	COGs: COG0212 5-formyltetrahydrofolate cyclo-ligase; InterPro IPR002698; KEGG: mrb:Mrub_2496 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; SPTR: 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase
YP_004058194.1	COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005834: IPR005833: IPR006402; KEGG: tth:TTC1248 hydrolase family protein; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: Hydrolase family protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
YP_004058195.1	COGs: COG0144 tRNA and rRNA cytosine-C5-methylase; InterPro IPR006650: IPR018314: IPR001678; KEGG: mrb:Mrub_1306 RNA methylase NOL1/NOP2/sun family; PFAM: Fmu (Sun) domain protein; SPTR: RNA methylase, NOL1/NOP2/sun family; PFAM: NOL1/NOP2/sun family; TIGRFAM: NOL1/NOP2/sun family RNA methylase
YP_004058196.1	COGs: COG0736 Phosphopantetheinyl transferase (holo-ACP synthase); InterPro IPR008278: IPR004568; KEGG: mrb:Mrub_1307 holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; SPTR: 4'-phosphopantetheinyl transferase; PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantethiene--protein transferase domain; holo-[acyl-carrier-protein] synthase
YP_004058197.1	InterPro IPR000182; KEGG: msv:Mesil_0969 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family
YP_004058198.1	InterPro IPR013096; KEGG: ttj:TTHA0104 hypothetical protein; PFAM: Cupin 2 conserved barrel domain protein; SPTR: Cupin 2 conserved barrel domain protein; PFAM: Cupin domain
YP_004058199.1	COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198: IPR002347; KEGG: tra:Trad_2167 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase
YP_004058200.1	COGs: COG1765 redox protein regulator of disulfide bond formation; InterPro IPR003718; KEGG: mrb:Mrub_2351 OsmC family protein; PFAM: OsmC family protein; SPTR: OsmC family protein; PFAM: OsmC-like protein
YP_004058201.1	COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR000212: IPR014016: IPR014017; KEGG: msv:Mesil_1403 UvrD/REP helicase; PFAM: UvrD/REP helicase; SPTR: UvrD/REP helicase; PFAM: UvrD/REP helicase
YP_004058202.1	KEGG: msv:Mesil_1402 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058203.1	COGs: COG0450 Peroxiredoxin; InterPro IPR000866: IPR019479: IPR017936; KEGG: aac:Aaci_2242 peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; PRIAM: Peroxiredoxin; SPTR: Peroxiredoxin; PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family
YP_004058204.1	COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: tra:Trad_2517 Cys/Met metabolism pyridoxal-phosphate-dependent protein; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; SPTR: Cys/Met metabolism pyridoxal-phosphate-dependent protein; PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: methionine gamma-lyase
YP_004058205.1	InterPro IPR013216; KEGG: dra:DR_2622 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: Putative uncharacterized protein; manually curated; PFAM: Methyltransferase domain
YP_004058206.1	COGs: COG1272 membrane protein hemolysin III homolog; InterPro IPR004254: IPR005744; KEGG: mrb:Mrub_1757 channel protein, hemolysin III family; PFAM: Hly-III family protein; SPTR: Channel protein, hemolysin III family; TIGRFAM: channel protein, hemolysin III family; PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family
YP_004058207.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR005829: IPR001789: IPR001867; KEGG: msv:Mesil_2637 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; SPTR: Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_004058208.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR003660: IPR003661: IPR003594: IPR004358: IPR 005467; KEGG: ttj:TTHA1503 sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SPTR: Sensor histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; TIGRFAM: heavy metal sensor kinase
YP_004058209.1	COGs: COG3877 conserved hypothetical protein; InterPro IPR018658; KEGG: mrb:Mrub_1216 hypothetical protein; PFAM: Protein of unknown function DUF2089; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function(DUF2089)
YP_004058210.1	KEGG: reu:Reut_A2757 pseudouridine synthase, Rsu; SPTR: Pseudouridine synthase
YP_004058211.1	InterPro IPR018658; KEGG: msv:Mesil_2642 hypothetical protein; PFAM: Protein of unknown function DUF2089; SPTR: Putative uncharacterized protein
YP_004058212.1	KEGG: mrb:Mrub_1213 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058213.1	InterPro IPR002541; KEGG: ttj:TTHA1505 cytochrome c assembly protein-related protein; PFAM: cytochrome c assembly protein; SPTR: Cytochrome c assembly protein-related protein; PFAM: Cytochrome C assembly protein
YP_004058214.1	COGs: COG0373 Glutamyl-tRNA reductase; InterPro IPR018214: IPR015895: IPR006151: IPR000343; KEGG: tth:TTC1142 glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; Shikimate/quinate 5-dehydrogenase; SPTR: Glutamyl-tRNA reductase; TIGRFAM: glutamyl-tRNA reductase; PFAM: Glutamyl-tRNAGlu reductase, N-terminal domain; Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase
YP_004058215.1	COGs: COG1587 Uroporphyrinogen-III synthase; InterPro IPR003754; KEGG: ttj:TTHA1507 uroporphyrinogen III synthase; PFAM: Uroporphyrinogen III synthase HEM4; SPTR: Putative uroporphyrinogen-III synthase hemD; PFAM: Uroporphyrinogen-III synthase HemD
YP_004058216.1	COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterPro IPR007197: IPR010723: IPR004559: IPR006638; KEGG: tth:TTC0123 coproporphyrinogen oxidase, anaerobic; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Coproporphyrinogen oxidase, anaerobic; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase
YP_004058217.1	COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: dra:DR_0211 hypothetical protein; PFAM: MscS Mechanosensitive ion channel; SPTR: Putative uncharacterized protein; PFAM: Mechanosensitive ion channel
YP_004058218.1	InterPro IPR013216; KEGG: mrb:Mrub_0991 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: Tellurite resistance protein TehB
YP_004058219.1	COGs: COG2382 Enterochelin esterase; InterPro IPR000801; KEGG: mrb:Mrub_0993 esterase; PFAM: esterase; SPTR: Putative esterase; PFAM: Putative esterase
YP_004058220.1	COGs: COG1225 Peroxiredoxin; InterPro IPR000866: IPR017936; KEGG: mrb:Mrub_2252 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: AhpC/TSA family
YP_004058221.1	COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR013154: IPR013149; KEGG: ttj:TTHA0466 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; SPTR: Alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase
YP_004058222.1	KEGG: reu:Reut_B3805 major facilitator transporter; SPTR: Major facilitator superfamily MFS_1
YP_004058223.1	KEGG: mdi:METDI0351 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2892)
YP_004058224.1	COGs: COG1432 conserved hypothetical protein; KEGG: msv:Mesil_2873 protein of unknown function DUF88; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF88
YP_004058225.1	COGs: COG0203 Ribosomal protein L17; InterPro IPR000456; KEGG: ttj:TTHA1663 50S ribosomal protein L17; PFAM: ribosomal protein L17; SPTR: 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17
YP_004058226.1	COGs: COG0202 DNA-directed RNA polymerase alpha subunit/40 kD subunit; InterProIPR011261: IPR011262: IPR011260: IPR011773: IPR 011263; KEGG: msv:Mesil_2879 DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase insert; RNA polymerase dimerisation; RNA polymerase alpha subunit domain protein; SMART: RNA polymerase RpoA/D/Rpb3-type; SPTR: DNA-directed RNA polymerase, alpha subunit; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type
YP_004058227.1	COGs: COG0522 Ribosomal protein S4 and related protein; InterPro IPR018079: IPR001912: IPR002942: IPR005709; KEGG: ttj:TTHA1665 30S ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: 30S ribosomal protein S4; TIGRFAM: ribosomal protein S4; PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type
YP_004058228.1	COGs: COG0100 Ribosomal protein S11; InterPro IPR018102: IPR001971: IPR019981; KEGG: msv:Mesil_2881 30S ribosomal protein S11; PFAM: ribosomal protein S11; SPTR: 30S ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11
YP_004058229.1	COGs: COG0099 Ribosomal protein S13; InterPro IPR018269: IPR001892: IPR019980; KEGG: ttj:TTHA1667 30S ribosomal protein S13; PFAM: ribosomal protein S13; SPTR: 30S ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13
YP_004058230.1	InterPro IPR000923: IPR000473; KEGG: ttj:TTHA1668 50S ribosomal protein L36; PFAM: ribosomal protein L36; SPTR: 50S ribosomal protein L36; TIGRFAM: ribosomal protein L36; PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type
YP_004058231.1	COGs: COG0361 Translation initiation factor 1 (IF-1); InterPro IPR006196: IPR004368; KEGG: ttj:TTHA1669 translation initiation factor IF-1; PFAM: S1 IF1 family protein; SPTR: Translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1
YP_004058232.1	COGs: COG0024 Methionine aminopeptidase; InterPro IPR002467: IPR000994: IPR001714; KEGG: ttj:TTHA1670 methionine aminopeptidase; PFAM: peptidase M24; SPTR: Methionine aminopeptidase; TIGRFAM: methionine aminopeptidase, type I; PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I
YP_004058233.1	COGs: COG0563 Adenylate kinase and related kinase; InterPro IPR000850: IPR006259; KEGG: ttj:TTHA1671 adenylate kinase; PFAM: adenylate kinase; SPTR: Adenylate kinase; TIGRFAM: adenylate kinase; PFAM: Adenylate kinase; TIGRFAM: adenylate kinases
YP_004058234.1	COGs: COG0201 Preprotein translocase subunit SecY; InterPro IPR002208; KEGG: tth:TTC1308 preprotein translocase subunit SecY; PFAM: SecY protein; SPTR: Preprotein translocase, SecY subunit; TIGRFAM: preprotein translocase, SecY subunit; PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit; ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)
YP_004058235.1	COGs: COG0200 Ribosomal protein L15; InterPro IPR001196: IPR005749; KEGG: msv:Mesil_2888 ribosomal protein L15; SPTR: Ribosomal protein L15; TIGRFAM: ribosomal protein L15; PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle
YP_004058236.1	COGs: COG1841 Ribosomal protein L30/L7E; InterPro IPR000517: IPR005996; KEGG: msv:Mesil_2889 ribosomal protein L30; PFAM: ribosomal protein L30; SPTR: Ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle
YP_004058237.1	COGs: COG0098 Ribosomal protein S5; InterPro IPR018192: IPR013810: IPR005324: IPR005712; KEGG: msv:Mesil_2890 ribosomal protein S5; PFAM: ribosomal protein S5 domain protein; Ribosomal protein S5; SPTR: Ribosomal protein S5; TIGRFAM: ribosomal protein S5; PFAM: Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type
YP_004058238.1	COGs: COG0256 Ribosomal protein L18; InterPro IPR005484: IPR004389; KEGG: ttj:TTHA1676 50S ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; SPTR: 50S ribosomal protein L18; TIGRFAM: ribosomal protein L18; PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type
YP_004058239.1	COGs: COG0097 Ribosomal protein L6P/L9E; InterPro IPR020040: IPR019906: IPR000702; KEGG: ttj:TTHA1677 50S ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain; SPTR: 50S ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type
YP_004058240.1	COGs: COG0096 Ribosomal protein S8; InterPro IPR000630; KEGG: msv:Mesil_2893 ribosomal protein S8; PFAM: ribosomal protein S8; SPTR: Ribosomal protein S8; PFAM: Ribosomal protein S8
YP_004058241.1	COGs: COG0199 Ribosomal protein S14; InterPro IPR018271: IPR001209; KEGG: ttj:TTHA1679 30S ribosomal protein S14; PFAM: ribosomal protein S14; SPTR: Ribosomal protein S14; PFAM: Ribosomal protein S14p/S29e
YP_004058242.1	COGs: COG0094 Ribosomal protein L5; InterPro IPR020929: IPR002132; KEGG: ttj:TTHA1680 50S ribosomal protein L5; SPTR: 50S ribosomal protein L5; PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5
YP_004058243.1	COGs: COG0198 Ribosomal protein L24; InterPro IPR005825: IPR005824: IPR003256; KEGG: msv:Mesil_2896 ribosomal protein L24; PFAM: KOW domain protein; SMART: KOW domain protein; SPTR: Ribosomal protein L24; TIGRFAM: ribosomal protein L24; PFAM: KOW motif; TIGRFAM: ribosomal protein L24, bacterial/organelle
YP_004058244.1	COGs: COG0093 Ribosomal protein L14; InterPro IPR019972: IPR000218: IPR005745; KEGG: msv:Mesil_2897 ribosomal protein L14; PFAM: ribosomal protein L14b/L23e; SPTR: Ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle
YP_004058245.1	COGs: COG0186 Ribosomal protein S17; InterPro IPR019979: IPR000266: IPR019984; KEGG: msv:Mesil_2898 30S ribosomal protein S17; PFAM: ribosomal protein S17; SPTR: 30S ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17
YP_004058246.1	InterPro IPR018254: IPR001854; KEGG: msv:Mesil_2899 ribosomal protein L29; PFAM: ribosomal protein L29; SPTR: Ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29
YP_004058247.1	COGs: COG0197 Ribosomal protein L16/L10E; InterPro IPR020798: IPR016180: IPR000114; KEGG: mrb:Mrub_2612 50S ribosomal protein L16; PFAM: Ribosomal protein L10e/L16; SPTR: 50S ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle
YP_004058248.1	COGs: COG0092 Ribosomal protein S3; InterProIPR018280: IPR008282: IPR004044: IPR001351: IPR 004088: IPR005704: IPR004087; KEGG: msv:Mesil_2901 ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; Ribosomal protein S3 domain; KH type 2 domain protein; SMART: KH domain protein; SPTR: Ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type
YP_004058249.1	COGs: COG0091 Ribosomal protein L22; InterPro IPR018260: IPR001063: IPR005727; KEGG: ttj:TTHA1687 50S ribosomal protein L22; PFAM: ribosomal protein L22/L17; SPTR: 50S ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type
YP_004058250.1	COGs: COG0185 Ribosomal protein S19; InterPro IPR020934: IPR002222: IPR005732; KEGG: ttj:TTHA1688 30S ribosomal protein S19; PFAM: ribosomal protein S19/S15; SPTR: 30S ribosomal protein S19; TIGRFAM: ribosomal protein S19; PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle
YP_004058251.1	COGs: COG0090 Ribosomal protein L2; InterPro IPR002171: IPR005880; KEGG: ttj:TTHA1689 50S ribosomal protein L2; PFAM: ribosomal protein L2; SPTR: 50S ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar
YP_004058252.1	COGs: COG0089 Ribosomal protein L23; InterPro IPR013025; KEGG: ttj:TTHA1690 50S ribosomal protein L23; PFAM: Ribosomal protein L25/L23; SPTR: 50S ribosomal protein L23; PFAM: Ribosomal protein L23
YP_004058253.1	COGs: COG0088 Ribosomal protein L4; InterPro IPR002136; KEGG: ttj:TTHA1691 50S ribosomal protein L4; PFAM: ribosomal protein L4/L1e; SPTR: 50S ribosomal protein L4; PFAM: Ribosomal protein L4/L1 family
YP_004058254.1	COGs: COG0087 Ribosomal protein L3; InterPro IPR019926: IPR000597: IPR019927; KEGG: ttj:TTHA1692 50S ribosomal protein L3; PFAM: ribosomal protein L3; SPTR: 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial
YP_004058255.1	COGs: COG0051 Ribosomal protein S10; InterPro IPR018268: IPR001848: IPR005731; KEGG: ttj:TTHA1693 30S ribosomal protein S10; PFAM: ribosomal protein S10; SPTR: 30S ribosomal protein S10; TIGRFAM: ribosomal protein S10; PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle
YP_004058256.1	COGs: COG0050 GTPase - translation elongation factors; InterPro IPR000795: IPR004161: IPR005225; KEGG: msv:Mesil_2909 translation elongation factor Tu; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; SPTR: Translation elongation factor Tu; TIGRFAM: small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU
YP_004058257.1	COGs: COG0480 Translation elongation factors (GTPase); InterProIPR000795: IPR004161: IPR005517: IPR000640: IPR 004540: IPR005225; KEGG: ttj:TTHA1695 elongation factor G; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain-containing protein; SPTR: Elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain
YP_004058258.1	COGs: COG0049 Ribosomal protein S7; InterPro IPR020606: IPR000235: IPR005717; KEGG: ttj:TTHA1696 30S ribosomal protein S7; PFAM: ribosomal protein S7; SPTR: 30S ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle
YP_004058259.1	COGs: COG0048 Ribosomal protein S12; InterPro IPR006032: IPR005679; KEGG: ttj:TTHA1697 30S ribosomal protein S12; PFAM: ribosomal protein S12/S23; SPTR: 30S ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle
YP_004058260.1	COGs: COG1840 ABC-type Fe3+ transport system periplasmic component; InterPro IPR016059: IPR006059; KEGG: tra:Trad_1534 extracellular solute-binding protein family 1; PFAM: extracellular solute-binding protein family 1; SPTR: Ferric iron ABC transporter iron-binding protein; PFAM: Bacterial extracellular solute-binding protein
YP_004058261.1	COGs: COG1178 ABC-type Fe3+ transport system permease component; InterPro IPR000515; KEGG: srm:SRM_02619 ferric ABC transporter permease FbpB; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Ferric ABC transporter permease fbpB; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004058262.1	COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR017871: IPR003439: IPR013611: IPR003593; KEGG: mrb:Mrub_2272 ABC transporter-like protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; SPTR: ABC transporter; PFAM: ABC transporter; TOBE domain
YP_004058263.1	COGs: COG0101 Pseudouridylate synthase; InterPro IPR020097: IPR001406; KEGG: msv:Mesil_2726 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; PRIAM: tRNA-pseudouridine synthase I; SPTR: tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I
YP_004058264.1	InterPro IPR022272; KEGG: rpt:Rpal_2698 exported protein of unknown function; SPTR: Major ampullate spidroin 2
YP_004058265.1	KEGG: ttj:TTHA0332 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058266.1	COGs: COG1003 Glycine cleavage system protein P (pyridoxal-binding) C-terminal domain; InterPro IPR001597; KEGG: msv:Mesil_2002 glycine dehydrogenase (decarboxylating); PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; SPTR: Glycine dehydrogenase (Decarboxylating); PFAM: Glycine cleavage system P-protein
YP_004058267.1	COGs: COG0403 Glycine cleavage system protein P (pyridoxal-binding) N-terminal domain; InterPro IPR020580; KEGG: ttj:TTHA0525 glycine dehydrogenase subunit 1; PFAM: Glycine cleavage system P-protein-like; PRIAM: Glycine dehydrogenase (decarboxylating); SPTR: Glycine dehydrogenase; PFAM: Glycine cleavage system P-protein
YP_004058268.1	COGs: COG0509 Glycine cleavage system H protein (lipoate-binding); InterPro IPR003016: IPR002930: IPR000089: IPR017453; KEGG: tth:TTC0149 glycine cleavage system protein H; PFAM: glycine cleavage H-protein; SPTR: Glycine cleavage system H protein; TIGRFAM: glycine cleavage system H protein; PFAM: Glycine cleavage H-protein; TIGRFAM: glycine cleavage system H protein
YP_004058269.1	COGs: COG0404 Glycine cleavage system T protein (aminomethyltransferase); InterPro IPR006222: IPR013977: IPR006223; KEGG: ttj:TTHA0523 glycine cleavage system aminomethyltransferase T; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; SPTR: Aminomethyltransferase; TIGRFAM: glycine cleavage system T protein; PFAM: Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; TIGRFAM: glycine cleavage system T protein
YP_004058270.1	COGs: COG2229 GTPase; KEGG: tth:TTC0767 gliding motility protein; SPTR: Gliding motility protein; PFAM: ADP-ribosylation factor family
YP_004058271.1	InterPro IPR004942; KEGG: mrb:Mrub_1714 roadblock/LC7 family protein; PFAM: Roadblock/LC7 family protein; SPTR: Roadblock/LC7 family protein; PFAM: Roadblock/LC7 domain
YP_004058272.1	COGs: COG1164 Oligoendopeptidase F; InterPro IPR013647: IPR001567: IPR011977; KEGG: msv:Mesil_2647 oligoendopeptidase, PepF/M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; SPTR: Oligoendopeptidase, pepF/M3 family; TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: Oligopeptidase F; Peptidase family M3; TIGRFAM: oligoendopeptidase, pepF/M3 family
YP_004058273.1	InterPro IPR011701; KEGG: ttj:TTHA1597 transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Bacterial protein of unknown function (DUF894)
YP_004058274.1	KEGG: msv:Mesil_1381 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058275.1	COGs: COG0631 Serine/threonine protein phosphatase; InterPro IPR010822: IPR001932; KEGG: mrb:Mrub_1157 protein serine/threonine phosphatase; PFAM: Stage II sporulation protein E; SMART: protein phosphatase 2C domain protein; SPTR: Protein serine/threonine phosphatase; PFAM: Protein phosphatase 2C
YP_004058276.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR017441: IPR008271: IPR017442: IPR013658: IPR 001258: IPR000719: IPR013017: IPR020635: IPR002290; KEGG: msv:Mesil_1383 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMP-30/Gluconolaconase/LRE-like region-containing protein; NHL repeat containing protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain; NHL repeat
YP_004058277.1	COGs: COG0232 dGTP triphosphohydrolase; InterPro IPR006674: IPR006261: IPR003607; KEGG: mrb:Mrub_0872 deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: Deoxyguanosinetriphosphate triphosphohydrolase; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative
YP_004058278.1	COGs: COG2151 metal-sulfur cluster biosynthetic protein; InterPro IPR002744; KEGG: ttj:TTHA0519 hypothetical protein; PFAM: protein of unknown function DUF59; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF59
YP_004058279.1	COGs: COG0247 Fe-S oxidoreductase; InterPro IPR017900: IPR004017: IPR017896; KEGG: tth:TTC0752 iron-sulfur binding reductase, putative; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: Putative uncharacterized protein; PFAM: Cysteine-rich domain
YP_004058280.1	COGs: COG1963 conserved hypothetical protein; InterPro IPR003832; KEGG: mrb:Mrub_2370 acid phosphatase/vanadium-dependent haloperoxidase-like protein; PFAM: acid phosphatase/vanadium-dependent haloperoxidase related; SPTR: Acid phosphatase/vanadium-dependent haloperoxidase related protein; PFAM: Divergent PAP2 family
YP_004058281.1	COGs: COG0190 5 10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; InterPro IPR020867: IPR020630: IPR020631: IPR000672; KEGG: tth:TTC0755 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; PRIAM: Methylenetetrahydrofolate dehydrogenase (NADP(+)); SPTR: Bifunctional protein folD; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
YP_004058282.1	COGs: COG0781 Transcription termination factor; InterPro IPR006027: IPR011605; KEGG: mrb:Mrub_2372 NusB antitermination factor; PFAM: NusB/RsmB/TIM44; SPTR: NusB antitermination factor; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB
YP_004058283.1	InterPro IPR005531; KEGG: mrb:Mrub_2373 hypothetical protein; PFAM: protein of unknown function DUF322; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF322)
YP_004058284.1	COGs: COG0439 Biotin carboxylase; InterProIPR005479: IPR005481: IPR005482: IPR011761: IPR 011764: IPR004549; KEGG: ttj:TTHA1123 acetyl-CoA carboxylase, biotin carboxylase subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; SPTR: Acetyl-CoA carboxylase, biotin carboxylase; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit
YP_004058285.1	COGs: COG0511 Biotin carboxyl carrier protein; InterPro IPR001882: IPR000089: IPR001249; KEGG: tth:TTC0759 biotin carboxyl carrier protein of acetyl-CoA carboxylase; PFAM: biotin/lipoyl attachment domain-containing protein; SPTR: Acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein
YP_004058286.1	COGs: COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); InterProIPR013852: IPR013185: IPR001059: IPR015365: IPR 011768: IPR020599; KEGG: ttj:TTHA1125 elongation factor P; PFAM: Elongation factor P; Elongation factor KOW-like domain-containing protein; Elongation factor P/YeiP protein; SPTR: Elongation factor P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P
YP_004058287.1	KEGG: mrb:Mrub_1830 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058288.1	COGs: COG0021 Transketolase; InterPro IPR005474: IPR005475: IPR005476: IPR005478; KEGG: mrb:Mrub_1828 transketolase; PFAM: Transketolase domain-containing protein; Transketolase central region; SPTR: Transketolase; TIGRFAM: transketolase; PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast
YP_004058289.1	InterPro IPR013026: IPR019734; KEGG: msv:Mesil_2447 TPR repeat-containing protein; SPTR: TPR repeat-containing protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2325)
YP_004058290.1	COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006140: IPR006139; KEGG: msv:Mesil_1507 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; SPTR: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
YP_004058291.1	COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182; KEGG: msv:Mesil_1506 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family
YP_004058292.1	COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR006095: IPR006097: IPR006096: IPR014362; KEGG: mrb:Mrub_0389 glu/Leu/Phe/Val dehydrogenase; PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; SPTR: Glu/Leu/Phe/Val dehydrogenase; PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
YP_004058293.1	COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterProIPR020082: IPR006097: IPR006096: IPR006095: IPR 014362; KEGG: msv:Mesil_1504 glutamate dehydrogenase (NAD(P)(+)); PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; SPTR: Glutamate dehydrogenase (NAD(P)(+)); PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
YP_004058294.1	COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: mrb:Mrub_0392 dimethylallyltranstransferase; PFAM: Polyprenyl synthetase; SPTR: Dimethylallyltranstransferase; PFAM: Polyprenyl synthetase
YP_004058295.1	KEGG: swd:Swoo_3406 amidohydrolase 3; SPTR: Putative uncharacterized protein
YP_004058296.1	COGs: COG2344 AT-rich DNA-binding protein; InterPro IPR009718: IPR003781; KEGG: msv:Mesil_1501 CoA-binding domain protein; PFAM: CoA-binding domain protein; Rex DNA-binding domain protein; SPTR: CoA-binding domain protein; PFAM: CoA binding domain; Putative DNA-binding protein N-terminus
YP_004058297.1	InterPro IPR007730; KEGG: ttj:TTHA1658 hypothetical protein; PFAM: Sporulation domain-containing protein; SPTR: Putative uncharacterized protein; PFAM: Sporulation related domain
YP_004058298.1	InterPro IPR001440: IPR011716: IPR019734: IPR013026; KEGG: msv:Mesil_1499 tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; Tetratricopeptide TPR_3 repeat-containing protein; SPTR: Tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide repeat
YP_004058299.1	COGs: COG2322 membrane protein; InterPro IPR007352; KEGG: msv:Mesil_2607 protein of unknown function DUF420; PFAM: protein of unknown function DUF420; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF420)
YP_004058300.1	KEGG: msv:Mesil_2608 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058301.1	KEGG: rmr:Rmar_2545 oxidoreductase domain protein; SPTR: Oxidoreductase domain protein
YP_004058302.1	KEGG: mmh:Mmah_0197 cytochrome c, putative; SPTR: Cytochrome c, putative
YP_004058303.1	InterPro IPR011031; KEGG: hoh:Hoch_6281 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058304.1	KEGG: msv:Mesil_0799 outer membrane efflux protein; SPTR: Outer membrane efflux protein; PFAM: Outer membrane efflux protein
YP_004058305.1	COGs: COG0073 EMAP domain; InterPro IPR002547: IPR008231; KEGG: msv:Mesil_2609 export-related chaperone CsaA; PFAM: t-RNA-binding domain-containing protein; SPTR: CsaA protein; TIGRFAM: export-related chaperone CsaA; PFAM: Putative tRNA binding domain; TIGRFAM: export-related chaperone CsaA
YP_004058306.1	COGs: COG1804 acyl-CoA transferase/carnitine dehydratase; InterPro IPR003673; KEGG: ttj:TTHA0692 fatty acid Co-A racemase related protein; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; SPTR: Fatty acid Co-A racemase related protein; PFAM: CoA-transferase family III
YP_004058307.1	COGs: COG1796 DNA polymerase IV (family X); InterProIPR004013: IPR002008: IPR002054: IPR003583: IPR 003141; KEGG: msv:Mesil_1948 PHP domain protein; PFAM: PHP domain protein; SMART: DNA polymerase X; Helix-hairpin-helix DNA-binding class 1; phosphoesterase PHP domain protein; SPTR: PHP domain protein; PFAM: PHP domain
YP_004058308.1	InterPro IPR012538; KEGG: ttj:TTHA1133 ba3-type cytochrome c oxidase polypeptide IIA; PFAM: cytochrome c oxidase subunit IIa; SPTR: Cytochrome c oxidase polypeptide IIA; PFAM: Cytochrome c oxidase subunit IIa family
YP_004058309.1	COGs: COG1622 Heme/copper-type cytochrome/quinol oxidase subunit 2; InterPro IPR001505: IPR015209: IPR002429; KEGG: mrb:Mrub_1826 cytochrome c oxidase subunit II; PFAM: cytochrome c oxidase subunit II; Cytochrome C oxidase subunit IIa transmembrane; SPTR: Cytochrome c oxidase subunit II; PFAM: Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome C oxidase subunit II, transmembrane
YP_004058310.1	COGs: COG0843 Heme/copper-type cytochrome/quinol oxidase subunit 1; InterPro IPR000883; KEGG: msv:Mesil_2020 cytochrome c oxidase subunit I; PFAM: cytochrome c oxidase subunit I; SPTR: Cytochrome c oxidase subunit I; PFAM: Cytochrome C and Quinol oxidase polypeptide I
YP_004058311.1	COGs: COG0184 Ribosomal protein S15P/S13E; InterPro IPR000589: IPR005290; KEGG: ttj:TTHA1138 30S ribosomal protein S15; PFAM: ribosomal protein S15; SPTR: 30S ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle
YP_004058312.1	COGs: COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); InterProIPR001247: IPR015847: IPR015848: IPR018111: IPR 003029: IPR012162: IPR004088: IPR004087; KEGG: tth:TTC0774 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding; K Homology, type 1, subgroup; RNA binding S1 domain protein; PRIAM: Polyribonucleotide nucleotidyltransferase; SMART: KH domain protein; SPTR: Polyribonucleotide nucleotidyltransferase; TIGRFAM: polyribonucleotide nucleotidyltransferase; PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; Polyribonucleotide nucleotidyltransferase, RNA binding domain; TIGRFAM: polyribonucleotide nucleotidyltransferase
YP_004058313.1	COGs: COG0595 hydrolase of the metallo-beta-lactamase superfamily; InterPro IPR001587: IPR011108; KEGG: ttj:TTHA1140 metallo-beta-lactamase superfamily protein; PFAM: RNA-metabolising metallo-beta-lactamase; SPTR: Metal dependent hydrolase; PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; TIGRFAM: conserved hypothetical protein
YP_004058314.1	COGs: COG0679 permease; InterPro IPR004776; KEGG: cyp:PCC8801_1894 auxin efflux carrier; PFAM: Auxin Efflux Carrier; SPTR: Auxin Efflux Carrier; PFAM: Membrane transport protein
YP_004058315.1	KEGG: mrb:Mrub_1588 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058316.1	COGs: COG1385 conserved hypothetical protein; InterPro IPR006700; KEGG: msv:Mesil_1997 protein of unknown function DUF558; PFAM: protein of unknown function DUF558; SPTR: Putative uncharacterized protein; PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family
YP_004058317.1	COGs: COG2264 Ribosomal protein L11 methylase; InterPro IPR010456: IPR004498; KEGG: msv:Mesil_1998 ribosomal L11 methyltransferase; PFAM: ribosomal L11 methyltransferase; SPTR: Ribosomal L11 methyltransferase; PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase
YP_004058318.1	KEGG: chl:Chy400_3873 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058319.1	COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR005829: IPR001261: IPR002933: IPR011650; KEGG: nda:Ndas_4949 peptidase M20; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: Peptidase M20; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain
YP_004058320.1	KEGG: msv:Mesil_3099 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058321.1	COGs: COG0205 6-phosphofructokinase; InterPro IPR015912: IPR000023: IPR012828: IPR012003; KEGG: ttj:TTHA1962 6-phosphofructokinase; PFAM: phosphofructokinase; SPTR: 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; PFAM: Phosphofructokinase; TIGRFAM: 6-phosphofructokinase
YP_004058322.1	COGs: COG0313 methyltransferase; InterPro IPR018063: IPR000878: IPR008189; KEGG: ttj:TTHA1963 tetrapyrrole methylase family protein; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; SPTR: Tetrapyrrole methylase family protein; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family
YP_004058323.1	InterPro IPR000620; KEGG: ttj:TTHA0012 integral membrane protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: Putative uncharacterized protein; PFAM: EamA-like transporter family
YP_004058324.1	KEGG: ttj:TTHA0300 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2905)
YP_004058325.1	COGs: COG3375 conserved hypothetical protein; InterPro IPR000182; KEGG: ttj:TTHA0873 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: Putative uncharacterized protein; PFAM: Acetyltransferase (GNAT) family
YP_004058326.1	COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: msv:Mesil_2974 ROK family protein; PFAM: ROK family protein; SPTR: ROK family protein; PFAM: ROK family; TIGRFAM: ROK family protein (glucokinase)
YP_004058327.1	KEGG: mrb:Mrub_0494 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058328.1	KEGG: ttj:TTHA0298 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058329.1	COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR001261: IPR002933: IPR011650; KEGG: ttj:TTHA0297 acetylornithine deacetylase (ArgE); PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: Acetylornithine deacetylase (ArgE); PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: selenium metabolism hydrolase
YP_004058330.1	COGs: COG0566 rRNA methylase; InterPro IPR013123: IPR001537: IPR004441; KEGG: ttj:TTHA0296 RNA methyltransferase; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; SPTR: 23S rRNA methyltransferase; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3
YP_004058331.1	COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: msv:Mesil_2729 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004058332.1	COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: ttj:TTHA1633 peptide ABC transporter permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Dipeptide ABC transporter permease dppB; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004058333.1	COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: ttj:TTHA1634 peptide ABC transporter, peptide-binding protein; PFAM: extracellular solute-binding protein family 5; SPTR: Peptide ABC transporter, peptide-binding protein; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_004058334.1	COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000994; KEGG: mrb:Mrub_2280 peptidase M24; PFAM: peptidase M24; SPTR: Peptidase M24; PFAM: Metallopeptidase family M24
YP_004058335.1	COGs: COG0531 Amino acid transporter; InterPro IPR004841: IPR002293; KEGG: amino acid transporter; PFAM: amino acid permease-associated region; SPTR: Uncharacterized protein MJ0609; PFAM: Amino acid permease; TC 2.A.3.6.3
YP_004058336.1	COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: msv:Mesil_1728 beta-lactamase domain protein; SPTR: Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily
YP_004058337.1	KEGG: mrb:Mrub_2018 O-antigen polymerase; SPTR: O-antigen polymerase
YP_004058338.1	COGs: COG1403 Restriction endonuclease; InterPro IPR002711: IPR003615; KEGG: mrb:Mrub_2818 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: HNH endonuclease; PFAM: HNH endonuclease
YP_004058339.1	InterPro IPR000620; KEGG: mrb:Mrub_2908 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: Putative uncharacterized protein; PFAM: EamA-like transporter family
YP_004058340.1	InterPro IPR001120: IPR012902; KEGG: mrb:Mrub_0898 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004058341.1	InterPro IPR007016; KEGG: mrb:Mrub_0895 O-antigen polymerase; PFAM: O-antigen polymerase; SPTR: O-antigen polymerase; PFAM: O-Antigen ligase
YP_004058342.1	COGs: COG0054 Riboflavin synthase beta-chain; InterPro IPR002180; KEGG: gwc:GWCH70_2236 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase; SPTR: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase
YP_004058343.1	COGs: COG0108 3 4-dihydroxy-2-butanone 4-phosphate synthase; InterPro IPR010916: IPR000422: IPR000926: IPR016299; KEGG: ttj:TTHA1062 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase; PFAM: GTP cyclohydrolase II; 34-dihydroxy-2-butanone 4-phosphate synthase; SPTR: GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase; TIGRFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase
YP_004058344.1	COGs: COG0307 Riboflavin synthase alpha chain; InterPro IPR001783; KEGG: mrb:Mrub_1254 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein; PRIAM: Riboflavin synthase; SPTR: Riboflavin synthase, alpha subunit; TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit
YP_004058345.1	COGs: COG0117 Pyrimidine deaminase; InterProIPR016192: IPR002125: IPR002734: IPR004794: IPR 011549; KEGG: mrb:Mrub_1255 riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding; SPTR: Riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD
YP_004058346.1	COGs: COG3033 Tryptophanase; InterPro IPR018176: IPR001597: IPR011166; KEGG: aba:Acid345_3931 tryptophanase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; PRIAM: Tryptophanase; SPTR: Tryptophanase; PFAM: Beta-eliminating lyase
YP_004058347.1	COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006089: IPR006092: IPR006091: IPR006090; KEGG: mrb:Mrub_0762 acyl-CoA dehydrogenase domain-containing protein; PFAM: acyl-CoA dehydrogenase domain-containing protein; SPTR: Acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_004058348.1	COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR014730: IPR012255; KEGG: msv:Mesil_0299 electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SPTR: Electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein domain
YP_004058349.1	COGs: COG2025 Electron transfer flavoprotein alpha subunit; InterPro IPR014730: IPR014731: IPR001308; KEGG: msv:Mesil_0300 electron transfer flavoprotein alpha subunit; PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; SPTR: Electron transfer flavoprotein alpha subunit; PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain
YP_004058350.1	KEGG: ttj:TTHB168 hypothetical protein; SPTR: Transcriptional regulator, AbrB family
YP_004058351.1	InterPro IPR002716; KEGG: ttj:TTHB169 hypothetical protein; PFAM: PilT protein domain protein; SPTR: Putative uncharacterized protein TTHB169; PFAM: PIN domain
YP_004058352.1	COGs: COG4799 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta); InterPro IPR000022: IPR011762: IPR011763; KEGG: ttj:TTHA1148 propionyl-CoA carboxylase, alpha subunit; PFAM: carboxyl transferase; SPTR: Putative propionyl-CoA carboxylase beta chain; PFAM: Carboxyl transferase domain
YP_004058353.1	COGs: COG1573 Uracil-DNA glycosylase; InterPro IPR005122; KEGG: msv:Mesil_3164 uracil-DNA glycosylase superfamily; PFAM: Uracil-DNA glycosylase superfamily; SPTR: Uracil-DNA glycosylase superfamily; PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4
YP_004058354.1	KEGG: msv:Mesil_3127 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: HD domain
YP_004058355.1	KEGG: msv:Mesil_2972 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058356.1	KEGG: tth:TTC1685 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058357.1	KEGG: tth:TTC1684 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058358.1	KEGG: tth:TTC1683 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058359.1	KEGG: tth:TTC1682 hypothetical protein; SPTR: Hypothetical membrane spanning protein
YP_004058360.1	KEGG: bta:510304 similar to nuclear factor related to kappaB binding protein; SPTR: Putative uncharacterized protein
YP_004058361.1	COGs: COG0302 GTP cyclohydrolase I; InterPro IPR018234: IPR020602: IPR001474; KEGG: ttj:TTHA1878 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; PRIAM: GTP cyclohydrolase I; SPTR: GTP cyclohydrolase 1; TIGRFAM: GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I
YP_004058362.1	COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198: IPR002347; KEGG: mrb:Mrub_2311 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase
YP_004058363.1	COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR020084: IPR000086: IPR020476; KEGG: msv:Mesil_2930 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: NUDIX hydrolase; PFAM: NUDIX domain
YP_004058364.1	InterPro IPR000462; KEGG: ttj:TTHA0459 hypothetical protein; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: Putative uncharacterized protein TTHA0459; PFAM: CDP-alcohol phosphatidyltransferase
YP_004058365.1	COGs: COG2856 Zn peptidase; InterPro IPR010359; KEGG: msv:Mesil_2929 protein of unknown function DUF955; PFAM: protein of unknown function DUF955; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF955)
YP_004058366.1	InterPro IPR001387; KEGG: msv:Mesil_2927 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Transcriptional regulator, XRE family; PFAM: Helix-turn-helix
YP_004058367.1	KEGG: msv:Mesil_2926 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058368.1	COGs: COG2105 conserved hypothetical protein; InterPro IPR009288; KEGG: msv:Mesil_0809 AIG2 family protein; PFAM: AIG2 family protein; SPTR: AIG2 family protein; PFAM: AIG2-like family
YP_004058369.1	KEGG: msv:Mesil_0807 SagB-type dehydrogenase domain protein; SPTR: Glucose-1-phosphate adenylyltransferase; PFAM: Nitroreductase family; TIGRFAM: SagB-type dehydrogenase domain
YP_004058370.1	COGs: COG0448 ADP-glucose pyrophosphorylase; InterPro IPR005836: IPR005835: IPR011831; KEGG: tth:TTC1976 glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; SPTR: Glucose-1-phosphate adenylyltransferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase
YP_004058371.1	COGs: COG0566 rRNA methylase; InterPro IPR001537; KEGG: tth:TTC1712 23S rRNA methyltransferase; PFAM: tRNA/rRNA methyltransferase (SpoU); SPTR: tRNA/rRNA methyltransferase (SpoU); PFAM: SpoU rRNA Methylase family
YP_004058372.1	COGs: COG0234 Co-chaperonin GroES (HSP10); InterPro IPR018369: IPR020818: IPR001476; KEGG: ttj:TTHA0272 co-chaperonin GroES; PFAM: Chaperonin Cpn10; SPTR: 10 kDa chaperonin; PFAM: Chaperonin 10 Kd subunit
YP_004058373.1	COGs: COG0459 Chaperonin GroEL (HSP60 family); InterPro IPR018370: IPR002423: IPR001844; KEGG: ttj:TTHA0271 chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; SPTR: 60 kDa chaperonin; TIGRFAM: chaperonin GroEL; PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL
YP_004058374.1	COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: mrb:Mrub_1090 HxlR family transcriptional regulator; PFAM: helix-turn-helix HxlR type; SPTR: Transcriptional regulator, HxlR family; PFAM: HxlR-like helix-turn-helix
YP_004058375.1	COGs: COG1576 conserved hypothetical protein; InterPro IPR003742; KEGG: mrb:Mrub_2319 hypothetical protein; PFAM: protein of unknown function DUF163; SPTR: Putative uncharacterized protein; PFAM: Predicted SPOUT methyltransferase; TIGRFAM: rRNA large subunit m3Psi methyltransferase RlmH
YP_004058376.1	COGs: COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type alpha subunit; InterPro IPR001017; KEGG: tth:TTC1757 2-oxoisovalerate dehydrogenase alpha subunit; PFAM: dehydrogenase E1 component; PRIAM: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring); SPTR: Pyruvate dehydrogenase (Acetyl-transferring); PFAM: Dehydrogenase E1 component
YP_004058377.1	COGs: COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit; InterPro IPR005475: IPR005476; KEGG: ttj:TTHA0230 2-oxoisovalerate dehydrogenase, E1 component beta subunit; PFAM: Transketolase central region; Transketolase domain-containing protein; SPTR: Transketolase central region; PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain
YP_004058378.1	COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterPro IPR003016: IPR000089: IPR004167: IPR001078; KEGG: msv:Mesil_1134 catalytic domain of components of various dehydrogenase complexes; PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; SPTR: Catalytic domain of components of various dehydrogenase complexes; PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme
YP_004058379.1	COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterProIPR012999: IPR013027: IPR004099: IPR000815: IPR 006258; KEGG: ttj:TTHA0233 pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: Dihydrolipoyl dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase
YP_004058380.1	InterPro IPR001120: IPR012902; KEGG: ttj:TTHB119 prepilin-like protein; SPTR: Putative uncharacterized protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004058381.1	KEGG: ttj:TTHB120 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058382.1	KEGG: gvi:gll4389 hypothetical protein; SPTR: Gll4389 protein
YP_004058383.1	KEGG: ttj:TTHA1658 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058384.1	InterPro IPR001120: IPR012902; KEGG: aeh:Mlg_0857 general secretion pathway protein H; SPTR: General secretion pathway protein H; PFAM: Prokaryotic N-terminal methylation motif; Type II transport protein GspH; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004058385.1	InterPro IPR001120: IPR012902; KEGG: dra:DR_1233 pilin, type IV, putative; SPTR: Pilin, type IV, putative; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004058386.1	InterPro IPR012902; KEGG: psl:Psta_0694 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004058387.1	COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR002880; KEGG: ttj:TTHA1955 2-oxoacid--ferredoxin oxidoreductase, alpha chain; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; SPTR: 2-oxoacid--ferredoxin oxidoreductase, alpha chain; PFAM: domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, alpha subunit
YP_004058388.1	COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit; InterPro IPR011766: IPR011896; KEGG: tth:TTC1592 2-oxoglutarate ferredoxin oxidoreductase subunit beta; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; PRIAM: 2-oxoglutarate synthase; SPTR: 2-oxoacid-ferredoxin oxidoreductase; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: Pyruvate ferredoxin oxidoreductase beta subunit C terminal; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family
YP_004058389.1	COGs: COG0128 5-enolpyruvylshikimate-3-phosphate synthase; InterPro IPR001986: IPR006264: IPR016228; KEGG: aac:Aaci_0640 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); PRIAM: 3-phosphoshikimate 1-carboxyvinyltransferase; SPTR: 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase
YP_004058390.1	COGs: COG0618 Exopolyphosphatase-related protein; InterPro IPR001667: IPR003156; KEGG: mrb:Mrub_0480 phosphoesterase RecJ domain-containing protein; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SPTR: Phosphoesterase RecJ domain protein; PFAM: DHH family; DHHA1 domain
YP_004058391.1	COGs: COG2379 Putative glycerate kinase; InterPro IPR013838: IPR000897: IPR007835; KEGG: msv:Mesil_1425 hydroxypyruvate reductase; PFAM: MOFRL domain protein; PRIAM: Hydroxypyruvate reductase; SPTR: Hydroxypyruvate reductase; PFAM: MOFRL family
YP_004058392.1	COGs: COG1609 Transcriptional regulators; InterPro IPR000843: IPR001761; KEGG: tra:Trad_0946 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; SPTR: Transcriptional regulator, LacI family; PFAM: Bacterial regulatory proteins, lacI family; family
YP_004058393.1	COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: tra:Trad_0947 extracellular solute-binding protein family 1; PFAM: extracellular solute-binding protein family 1; SPTR: Extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding protein
YP_004058394.1	COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: tra:Trad_0948 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004058395.1	COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: tra:Trad_0949 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004058396.1	COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: tra:Trad_0951 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1
YP_004058397.1	COGs: COG0366 Glycosidase; InterPro IPR006047: IPR006589: IPR016377; KEGG: mrb:Mrub_3029 alpha amylase catalytic subunit; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Alpha amylase catalytic region; PFAM: Alpha amylase, catalytic domain
YP_004058398.1	KEGG: tbr:Tb11.01.3270 A/G-specific adenine glycosylase; SPTR: A/G-specific adenine glycosylase, putative
YP_004058399.1	COGs: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase; InterPro IPR002204: IPR006115: IPR006183; KEGG: ttj:TTHA0237 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; SPTR: 6-phosphogluconate dehydrogenase NAD-binding; PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase
YP_004058400.1	KEGG: msv:Mesil_0834 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3054)
YP_004058401.1	COGs: COG0320 Lipoate synthase; InterPro IPR007197: IPR003698: IPR006638; KEGG: mrb:Mrub_1771 lipoic acid synthetase; PFAM: Radical SAM domain protein; PRIAM: Lipoyl synthase; SMART: Elongator protein 3/MiaB/NifB; SPTR: Lipoyl synthase; TIGRFAM: lipoic acid synthetase; PFAM: Radical SAM superfamily; TIGRFAM: lipoate synthase
YP_004058402.1	COGs: COG0321 Lipoate-protein ligase B; InterPro IPR020605: IPR004143: IPR000544; KEGG: ttj:TTHA0240 lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; PRIAM: Lipoyl(octanoyl) transferase; SPTR: Octanoyltransferase; TIGRFAM: lipoate-protein ligase B; PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: lipoate-protein ligase B
YP_004058403.1	COGs: COG0283 Cytidylate kinase; InterPro IPR011994: IPR003136; KEGG: tth:TTC0089 cytidylate kinase; PFAM: cytidylate kinase region; SPTR: Cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase
YP_004058405.1	COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR002034: IPR000891: IPR011872; KEGG: ttj:TTHA1914 homocitrate synthase; PFAM: pyruvate carboxyltransferase; PRIAM: Homocitrate synthase; SPTR: Homocitrate synthase; TIGRFAM: homocitrate synthase; PFAM: HMGL-like; TIGRFAM: homocitrate synthase
YP_004058406.1	COGs: COG0065 3-isopropylmalate dehydratase large subunit; InterPro IPR018136: IPR001030: IPR011826: IPR006251; KEGG: tth:TTC1547 3-isopropylmalate dehydratase large subunit; PFAM: aconitate hydratase domain-containing protein; SPTR: Homoaconitase large subunit; TIGRFAM: 3-isopropylmalate dehydratase; homoaconitate hydratase family protein; PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit; homoaconitate hydratase family protein
YP_004058407.1	COGs: COG0066 3-isopropylmalate dehydratase small subunit; InterPro IPR000573: IPR011827; KEGG: ttj:TTHA1910 homoaconitate hydratase small subunit; PFAM: aconitate hydratase domain-containing protein; SPTR: Probable homoaconitase small subunit (Homoaconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit
YP_004058408.1	KEGG: tth:TTC1545 hypothetical protein; SPTR: Hypothetical conserved protein
YP_004058409.1	InterPro IPR013137: IPR005906; KEGG: ttj:TTHA1908 hypothetical protein; SPTR: Lysine biosynthesis protein LysW; TIGRFAM: lysine biosynthesis protein LysW; PFAM: TFIIB zinc-binding; TIGRFAM: lysine biosynthesis protein LysW
YP_004058410.1	COGs: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); InterPro IPR013651: IPR011761: IPR004666: IPR011870; KEGG: ttj:TTHA1907 lysine biosynthesis enzyme LysX; PFAM: RimK domain protein ATP-grasp; SPTR: Lysine biosynthesis enzyme LysX; TIGRFAM: lysine biosynthesis enzyme LysX; alpha-L-glutamate ligase, RimK family; PFAM: RimK-like ATP-grasp domain; TIGRFAM: Lysine biosynthesis enzyme LysX; alpha-L-glutamate ligases, RimK family
YP_004058411.1	KEGG: bbr:BB4782 LysR family transcriptional regulator; SPTR: LysR-family transcriptional regulator
YP_004058412.1	COGs: COG5483 conserved hypothetical protein; InterPro IPR014519; KEGG: cyb:CYB_0386 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function, DUF488
YP_004058413.1	KEGG: maq:Maqu_1802 anion transporter; SPTR: Major facilitator superfamily protein
YP_004058414.1	COGs: COG0002 Acetylglutamate semialdehyde dehydrogenase; InterPro IPR000534: IPR012280: IPR000706; KEGG: tth:TTC1542 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; PRIAM: N-acetyl-gamma-glutamyl-phosphate reductase; SPTR:N-acetyl-gamma-glutamyl-phosphate/N-acetyl- gamma-aminoadipyl- phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form
YP_004058415.1	COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR007197: IPR016431; KEGG: ttj:TTHA1710 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SPTR: Radical SAM domain protein; PFAM: Radical SAM superfamily
YP_004058416.1	COGs: COG1355 dioxygenase; InterPro IPR002737; KEGG: ttj:TTHA1711 hypothetical protein; PFAM: protein of unknown function DUF52; SPTR: Putative uncharacterized protein; PFAM: Memo-like protein
YP_004058417.1	COGs: COG2078 conserved hypothetical protein; InterPro IPR002733; KEGG: slt:Slit_1845 AMMECR1 domain protein; PFAM: AMMECR1 domain protein; SPTR: AMMECR1 domain protein; PFAM: AMMECR1; TIGRFAM: uncharacterized protein, PH0010 family
YP_004058418.1	KEGG: tmz:Tmz1t_2087 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058419.1	COGs: COG3869 Arginine kinase; InterPro IPR000749; KEGG: sun:SUN_1812 arginine kinase; PFAM: ATP:guanido phosphotransferase; PRIAM: Arginine kinase; SPTR: Arginine kinase; PFAM: ATP:guanido phosphotransferase, N-terminal domain; ATP:guanido phosphotransferase, C-terminal catalytic domain
YP_004058420.1	COGs: COG2827 endonuclease containing a URI domain; InterPro IPR000305; KEGG: pla:Plav_0706 excinuclease ABC subunit C; PFAM: Excinuclease ABC C subunit domain protein; SPTR: Excinuclease ABC C subunit domain protein; PFAM: GIY-YIG catalytic domain
YP_004058421.1	COGs: COG0548 Acetylglutamate kinase; InterPro IPR001048: IPR001057: IPR004662: IPR011148; KEGG: mrb:Mrub_2721 acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; SPTR: Acetylglutamate kinase; TIGRFAM: acetylglutamate kinase; PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase
YP_004058422.1	COGs: COG4992 Ornithine/acetylornithine aminotransferase; InterPro IPR005814: IPR004636; KEGG: ttj:TTHA1755 acetylornithine aminotransferase; PFAM: aminotransferase class-III; PRIAM: Acetylornithine transaminase; SPTR: Acetylornithine/acetyl-lysine aminotransferase; TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine aminotransferases
YP_004058423.1	COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR001261: IPR002933: IPR010175; KEGG: tth:TTC1396 acetyl-lysine deacetylase; PFAM: peptidase M20; SPTR: Acetyl-lysine deacetylase; TIGRFAM: N-acetyl-ornithine/N-acetyl-lysine deacetylase; PFAM: Peptidase family M20/M25/M40; TIGRFAM: N-acetyl-ornithine/N-acetyl-lysine deacetylase
YP_004058424.1	KEGG: ssl:SS1G_01951 hypothetical protein; SPTR: JmjC domain-containing protein
YP_004058425.1	KEGG: bfo:BRAFLDRAFT_83208 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058426.1	COGs: COG0219 rRNA methylase (SpoU class); InterPro IPR001537: IPR016914; KEGG: ttj:TTHA0054 RNA methyltransferase; PFAM: tRNA/rRNA methyltransferase (SpoU); SPTR: RNA methyltransferase, putative; PFAM: SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, putative, group 2
YP_004058427.1	COGs: COG3044 ATPase of the ABC class; InterPro IPR019195; KEGG: ttj:TTHA0597 hypothetical protein; PFAM: ABC transporter ATPase; SPTR: Putative uncharacterized protein; PFAM: Predicted ATPase of the ABC class
YP_004058428.1	COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000160; KEGG: msv:Mesil_0346 diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: Diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_004058429.1	COGs: COG0554 Glycerol kinase; InterPro IPR018483: IPR018484: IPR018485: IPR005999; KEGG: mrb:Mrub_0437 glycerol kinase; PFAM: Carbohydrate kinase, FGGY-like; SPTR: Glycerol kinase; TIGRFAM: glycerol kinase; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase
YP_004058430.1	COGs: COG0578 Glycerol-3-phosphate dehydrogenase; InterPro IPR000447: IPR006076; KEGG: tra:Trad_0177 glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase; PRIAM: Glycerol-3-phosphate dehydrogenase; SPTR: Glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase
YP_004058431.1	KEGG: mrb:Mrub_1173 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058432.1	InterPro IPR004843; KEGG: msv:Mesil_2612 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase
YP_004058433.1	COGs: COG1329 Transcriptional regulators similar to M. xanthus CarD; InterPro IPR003711; KEGG: msv:Mesil_2613 transcriptional regulator, CarD family; PFAM: transcription factor CarD; SPTR: Transcriptional regulator, CarD family; PFAM: CarD-like/TRCF domain
YP_004058434.1	COGs: COG0030 Dimethyladenosine transferase (rRNA methylation); InterPro IPR020596: IPR001737: IPR011530: IPR020598; KEGG: msv:Mesil_2614 dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; SMART: Ribosomal RNA adenine methylase transferase-like; SPTR: Dimethyladenosine transferase; TIGRFAM: dimethyladenosine transferase; PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase
YP_004058435.1	COGs: COG0192 S-adenosylmethionine synthetase; InterPro IPR002133; KEGG: ttj:TTHA1642 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase; PRIAM: Methionine adenosyltransferase; SPTR: S-adenosylmethionine synthase; TIGRFAM: S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, N-terminal domain; S-adenosylmethionine synthetase, central domain; TIGRFAM: S-adenosylmethionine synthetase
YP_004058436.1	COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: ttj:TTHA1641 GGDEF domain-containing protein; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein; SPTR: GGDEF domain protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain
YP_004058437.1	COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR001917: IPR004839: IPR010962: IPR004723; KEGG: ttj:TTHA1582 2-amino-3-ketobutyrate CoA ligase (glycine acetyltransferase); PFAM: aminotransferase class I and II; PRIAM: Glycine C-acetyltransferase; SPTR: 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase; TIGRFAM: pyridoxal phosphate-dependent acyltransferase; 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; pyridoxal phosphate-dependent acyltransferase, putative
YP_004058438.1	COGs: COG1282 NAD/NADP transhydrogenase beta subunit; InterPro IPR004003: IPR012136; KEGG: mrb:Mrub_1894 NAD(P)(+) transhydrogenase (AB-specific); PFAM: NAD(P) transhydrogenase beta subunit; PRIAM: NAD(P)(+) transhydrogenase (AB-specific); SPTR: NAD(P) transhydrogenase subunit beta; PFAM: NAD(P) transhydrogenase beta subunit
YP_004058439.1	COGs: COG3288 NAD/NADP transhydrogenase alpha subunit; KEGG: mrb:Mrub_1895 pyruvate kinase; SPTR: Pyruvate kinase
YP_004058440.1	COGs: COG3288 NAD/NADP transhydrogenase alpha subunit; InterPro IPR008143: IPR007886: IPR007698; KEGG: mrb:Mrub_1896 NAD(P)(+) transhydrogenase (AB-specific); PFAM: alanine dehydrogenase/PNT domain protein; PRIAM: NAD(P)(+) transhydrogenase (AB-specific); SPTR: NAD(P)(+) transhydrogenase (AB-specific); PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: NAD(P) transhydrogenase, alpha subunit
YP_004058441.1	COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: mrb:Mrub_2300 nitroreductase; PFAM: nitroreductase; SPTR: Nitroreductase; PFAM: Nitroreductase family
YP_004058442.1	KEGG: mrb:Mrub_0291 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058443.1	COGs: COG1804 acyl-CoA transferase/carnitine dehydratase; InterPro IPR003673; KEGG: mrb:Mrub_2142 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; SPTR: L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III
YP_004058444.1	COGs: COG2309 Leucyl aminopeptidase (aminopeptidase T); KEGG: hvo:HVO_1774 leucyl aminopeptidase; SPTR: Leucyl aminopeptidase (Aminopeptidase T); PFAM: Thermophilic metalloprotease (M29)
YP_004058445.1	COGs: COG2358 TRAP-type uncharacterized transport system periplasmic component; InterPro IPR011852; KEGG: ttj:TTHA1157 immunogenic protein; SPTR: Putative uncharacterized protein; TIGRFAM: TRAP transporter solute receptor, TAXI family; PFAM: NMT1/THI5 like; TIGRFAM: TRAP transporter solute receptor, TAXI family
YP_004058446.1	COGs: COG4666 TRAP-type uncharacterized transport system fused permease components; InterPro IPR017871: IPR011853: IPR010656; KEGG: tth:TTC0794 hypothetical protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: Hypothetical membrane spanning protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: Domain of unknown function (DUF3394); DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein
YP_004058447.1	InterPro IPR004360; KEGG: bcm:Bcenmc03_4231 TPR repeat-containing protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Putative glyoxalase/bleomycin resistance family protein
YP_004058448.1	COGs: COG1559 periplasmic solute-binding protein; InterPro IPR003770; KEGG: ttj:TTHA1828 hypothetical protein; PFAM: aminodeoxychorismate lyase; SPTR: Putative uncharacterized protein TTHA1828; PFAM: YceG-like family; TIGRFAM: conserved hypothetical protein, YceG family
YP_004058449.1	COGs: COG0816 endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis); InterPro IPR005227: IPR006641; KEGG: tra:Trad_1924 Holliday junction resolvase YqgF; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; SPTR: Holliday junction resolvase YqgF; PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: RNAse H-fold protein YqgF
YP_004058450.1	COGs: COG0013 Alanyl-tRNA synthetase; InterProIPR018165: IPR002318: IPR018164: IPR012947: IPR 003156; KEGG: ttj:TTHA1831 alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; Threonyl/alanyl tRNA synthetase SAD; phosphoesterase DHHA1; SPTR: Alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; alanine--tRNA ligase
YP_004058451.1	COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: ttj:TTHA1833 ABC transporter, permease protein; PFAM: protein of unknown function DUF214; SPTR: ABC transporter, permease protein; PFAM: Predicted permease
YP_004058452.1	COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439: IPR017871: IPR003593; KEGG: msv:Mesil_0217 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter; PFAM: ABC transporter
YP_004058453.1	COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160: IPR003018; KEGG: tth:TTC0627 hypothetical protein; PFAM: GGDEF domain containing protein; GAF domain protein; PRIAM: Diguanylate kinase; SMART: GGDEF domain containing protein; GAF domain protein; SPTR: Hypothetical conserved protein; TIGRFAM: diguanylate cyclase; PFAM: GAF domain; GGDEF domain; TIGRFAM: glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type; diguanylate cyclase (GGDEF) domain
YP_004058454.1	COGs: COG0855 Polyphosphate kinase; InterPro IPR001736: IPR003414; KEGG: msv:Mesil_1242 polyphosphate kinase; PFAM: Polyphosphate kinase; PRIAM: Polyphosphate kinase; SPTR: Polyphosphate kinase; PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1
YP_004058455.1	COGs: COG0248 Exopolyphosphatase; InterPro IPR003695: IPR006674; KEGG: msv:Mesil_1243 Ppx/GppA phosphatase; PFAM: Ppx/GppA phosphatase; metal-dependent phosphohydrolase HD sub domain; SPTR: Ppx/GppA phosphatase; PFAM: HD domain; Ppx/GppA phosphatase family; TIGRFAM: exopolyphosphatase
YP_004058456.1	COGs: COG2062 Phosphohistidine phosphatase SixA; InterPro IPR013078; KEGG: aeh:Mlg_1872 phosphohistidine phosphatase, SixA; PFAM: Phosphoglycerate mutase; SPTR: Phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase family; TIGRFAM: phosphohistidine phosphatase SixA
YP_004058457.1	COGs: COG1117 ABC-type phosphate transport system ATPase component; InterProIPR003439: IPR015850: IPR017871: IPR005670: IPR 003593; KEGG: msv:Mesil_0653 phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Phosphate ABC transporter, ATPase subunit; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein
YP_004058458.1	COGs: COG0581 ABC-type phosphate transport system permease component; InterPro IPR000515: IPR005672; KEGG: mrb:Mrub_2520 phosphate ABC transporter inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Phosphate ABC transporter, inner membrane subunit PstA; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA
YP_004058459.1	COGs: COG0573 ABC-type phosphate transport system permease component; InterPro IPR000515: IPR011864; KEGG: msv:Mesil_0651 phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Phosphate ABC transporter, inner membrane subunit PstC; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstC
YP_004058460.1	COGs: COG0226 ABC-type phosphate transport system periplasmic component; InterPro IPR005673: IPR006059; KEGG: mrb:Mrub_2518 phosphate ABC transporter periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: Phosphate ABC transporter, periplasmic phosphate-binding protein; TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: phosphate ABC transporter, phosphate-binding protein
YP_004058461.1	COGs: COG0704 Phosphate uptake regulator; InterPro IPR008170; KEGG: ttj:TTHA0143 phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; SPTR: Phosphate transport system protein phoU; TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU
YP_004058462.1	COGs: COG5002 Signal transduction histidine kinase; InterPro IPR005467: IPR003661: IPR003594: IPR004358; KEGG: mrb:Mrub_1540 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: PAS/PAC sensor signal transduction histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_004058463.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: msv:Mesil_0841 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; SPTR: Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_004058464.1	KEGG: lch:Lcho_2109 ABC-type phosphate/phosphonate transport system periplasmic component-like protein; SPTR: ABC-type phosphate/phosphonate transport system periplasmic component
YP_004058465.1	COGs: COG1236 exonuclease of the beta-lactamase fold involved in RNA processing; InterPro IPR011108; KEGG: mrb:Mrub_1185 beta-lactamase domain-containing protein; PFAM: RNA-metabolising metallo-beta-lactamase; SPTR: Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain
YP_004058466.1	COGs: COG4585 Signal transduction histidine kinase; InterPro IPR005467: IPR011712: IPR003594: IPR004358; KEGG: msv:Mesil_2703 integral membrane sensor signal transduction histidine kinase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: Integral membrane sensor signal transduction histidine kinase; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
YP_004058467.1	COGs: COG0565 rRNA methylase; InterPro IPR004384: IPR001537; KEGG: msv:Mesil_2705 RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); SPTR: RNA methyltransferase, TrmH family, group 1; TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: SpoU rRNA Methylase family; TIGRFAM: RNA methyltransferase, TrmH family, group 1
YP_004058468.1	COGs: COG0260 Leucyl aminopeptidase; InterPro IPR000819: IPR008283; KEGG: msv:Mesil_0849 leucyl aminopeptidase; PFAM: peptidase M17 leucyl aminopeptidase domain protein; PRIAM: Leucyl aminopeptidase; SPTR: Leucyl aminopeptidase; PFAM: Cytosol aminopeptidase family, catalytic domain; Cytosol aminopeptidase family, N-terminal domain
YP_004058469.1	COGs: COG3872 metal-dependent protein; InterPro IPR010787; KEGG: msv:Mesil_0850 protein of unknown function DUF1385; PFAM: protein of unknown function DUF1385; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1385)
YP_004058470.1	COGs: COG0482 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain; InterPro IPR004506; KEGG: msv:Mesil_0851 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; SPTR: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
YP_004058471.1	COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains); InterPro IPR008258; KEGG: ttj:TTHA1471 transglycosylase; PFAM: Lytic transglycosylase catalytic; SPTR: Putative uncharacterized protein; PFAM: Transglycosylase SLT domain
YP_004058472.1	InterPro IPR001789; KEGG: mrb:Mrub_1643 response regulator receiver protein; PFAM: response regulator receiver; SPTR: Response regulator receiver protein; PFAM: Response regulator receiver domain
YP_004058473.1	COGs: COG0744 Membrane carboxypeptidase (penicillin-binding protein); InterPro IPR001264: IPR001460; KEGG: msv:Mesil_2706 glycosyl transferase family 51; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Glycosyl transferase family 51; PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase
YP_004058474.1	COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: msv:Mesil_0847 ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; SPTR: Ferric uptake regulator, Fur family; PFAM: Ferric uptake regulator family
YP_004058475.1	InterPro IPR007060; KEGG: msv:Mesil_0845 hypothetical protein; PFAM: Septum formation initiator; SPTR: Septum formation initiator; PFAM: Septum formation initiator
YP_004058476.1	KEGG: ttj:TTHA0253 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058477.1	COGs: COG0587 DNA polymerase III alpha subunit; InterProIPR004805: IPR004013: IPR011708: IPR004365: IPR 003141; KEGG: msv:Mesil_0842 DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; PRIAM: DNA-directed DNA polymerase; SMART: phosphoesterase PHP domain protein; SPTR: DNA polymerase III subunit alpha; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: Bacterial DNA polymerase III alpha subunit; PHP domain; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc)
YP_004058478.1	COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: mrb:Mrub_0734 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: Methyltransferase domain
YP_004058479.1	COGs: COG3221 ABC-type phosphate/phosphonate transport system periplasmic component; InterPro IPR005770; KEGG: msv:Mesil_0180 phosphonate ABC transporter, periplasmic phosphonate-binding protein; SPTR: Phosphonate ABC transporter, periplasmic phosphonate-binding protein; TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; PFAM: NMT1/THI5 like; TIGRFAM: phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein
YP_004058480.1	COGs: COG3638 ABC-type phosphate/phosphonate transport system ATPase component; InterPro IPR003439: IPR012693: IPR017871: IPR003593; KEGG: mrb:Mrub_2203 phosphonate ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Phosphonate ABC transporter, ATPase subunit; TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter; TIGRFAM: phosphonate ABC transporter, ATP-binding protein
YP_004058481.1	COGs: COG3639 ABC-type phosphate/phosphonate transport system permease component; InterPro IPR000515: IPR005769; KEGG: msv:Mesil_0182 phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Phosphonate ABC transporter, inner membrane subunit; TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphonate ABC transporter, permease protein PhnE
YP_004058482.1	COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107; KEGG: mrb:Mrub_2498 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein; SPTR: Band 7 protein; PFAM: SPFH domain / Band 7 family
YP_004058483.1	KEGG: tra:Trad_0079 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058484.1	COGs: COG1404 Subtilisin-like serine protease; InterPro IPR000209: IPR007280; KEGG: tra:Trad_0078 peptidase S8 and S53 subtilisin kexin sedolisin; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; peptidase domain protein; SPTR: Peptidase S8 and S53 subtilisin kexin sedolisin; PFAM: Bacterial pre-peptidase C-terminal domain; Subtilase family
YP_004058485.1	COGs: COG2815 conserved hypothetical protein; InterPro IPR005543; KEGG: msv:Mesil_0371 PASTA domain containing protein; PFAM: PASTA domain containing protein; SMART: PASTA domain containing protein; SPTR: PASTA domain containing protein; PFAM: PASTA domain
YP_004058486.1	KEGG: hwa:HQ2140A hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: DsrE/DsrF-like family
YP_004058487.1	COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005269; KEGG: tth:TTC1281 hypothetical protein; PFAM: Conserved hypothetical protein CHP00730; SPTR: Putative uncharacterized protein; PFAM: Possible lysine decarboxylase; TIGRFAM: conserved hypothetical protein, DprA/Smf-related, family 1; conserved hypothetical protein, DprA/Smf-related, family 2
YP_004058488.1	COGs: COG0164 Ribonuclease HII; InterPro IPR001352; KEGG: tth:TTC1788 ribonuclease HII; PFAM: ribonuclease HII/HIII; PRIAM: Ribonuclease H; SPTR: Ribonuclease HII; PFAM: Ribonuclease HII
YP_004058489.1	KEGG: msv:Mesil_0448 S-layer-like protein; SPTR: S-layer-like protein
YP_004058490.1	COGs: COG4663 TRAP-type mannitol/chloroaromatic compound transport system periplasmic component; InterPro IPR006311: IPR018389; KEGG: ttj:TTHA0196 transporter, periplasmic component; PFAM: Extracellular solute-binding protein, family 7; SPTR: Transporter, periplasmic component; PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence
YP_004058491.1	COGs: COG4664 TRAP-type mannitol/chloroaromatic compound transport system large permease component; InterPro IPR004681: IPR010656; KEGG: rmr:Rmar_2648 TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit
YP_004058492.1	COGs: COG4665 TRAP-type mannitol/chloroaromatic compound transport system small permease component; InterPro IPR007387; KEGG: rmr:Rmar_2649 tripartite ATP-independent periplasmic transporter DctQ component; PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; SPTR: TRAP transporter, DctQ-like membrane protein; PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component
YP_004058493.1	COGs: COG2211 Na+/melibiose symporter and related transporter; InterPro IPR005829: IPR011701; KEGG: mrb:Mrub_2955 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily
YP_004058494.1	InterPro IPR006016; KEGG: ttj:TTHA0192 hypothetical protein; PFAM: UspA domain-containing protein; SPTR: Universal stress protein family; PFAM: Universal stress protein family
YP_004058495.1	COGs: COG0294 Dihydropteroate synthase; InterPro IPR000489: IPR006390; KEGG: tth:TTC1795 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; PRIAM: Dihydropteroate synthase; SPTR: Dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase
YP_004058496.1	COGs: COG1539 Dihydroneopterin aldolase; InterPro IPR006157: IPR006156; KEGG: ttj:TTHA0190 dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase; SPTR: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; PFAM: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain
YP_004058497.1	COGs: COG0474 Cation transport ATPase; InterProIPR018303: IPR006534: IPR001757: IPR004014: IPR 008250: IPR005834; KEGG: nis:NIS_0930 H+-transporting P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; PRIAM: Proton-exporting ATPase; SPTR: H+-transporting P-type ATPase; TIGRFAM: plasma-membrane proton-efflux P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; Cation transporter/ATPase, N-terminus; TIGRFAM: plasma-membrane proton-efflux P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC
YP_004058498.1	COGs: COG0801 7 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; InterPro IPR000550; KEGG: ttj:TTHA1749 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (FolK); PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; PRIAM:2-amino-4-hydroxy-6-hydroxymethyldihydropteri dinediphosphokinase; SPTR:2-amino-4-hydroxy-6-hydroxymethyldihydropterid inepyrophosphokinase; TIGRFAM:2-amino-4-hydroxy-6-hydroxymethyldihydropte ridinepyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
YP_004058499.1	COGs: COG0285 Folylpolyglutamate synthase; InterPro IPR018109: IPR001645: IPR013221: IPR004101; KEGG: msv:Mesil_0351 FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; SPTR: FolC bifunctional protein; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase
YP_004058500.1	COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: ttj:TTHA0344 ferric uptake regulatory protein; PFAM: ferric-uptake regulator; SPTR: Ferric uptake regulation protein; PFAM: Ferric uptake regulator family
YP_004058501.1	COGs: COG0181 Porphobilinogen deaminase; InterPro IPR000860; KEGG: ttj:TTHA0345 porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; SPTR: Porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase
YP_004058502.1	KEGG: mrb:Mrub_0729 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058503.1	InterPro IPR001480; KEGG: cyn:Cyan7425_0297 hemolysin-type calcium-binding region; SPTR: Putative uncharacterized protein; PFAM: Beta-propeller repeat
YP_004058504.1	COGs: COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylase; InterPro IPR002830; KEGG: msv:Mesil_0356 UbiD family decarboxylase; PFAM: Carboxylyase-related protein; SPTR: UbiD family decarboxylase; TIGRFAM: UbiD family decarboxylase; PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: menaquinone biosynthesis decarboxylase, SCO4490 family; UbiD family decarboxylases
YP_004058505.1	COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: tra:Trad_1718 extracellular solute-binding protein family 5; PFAM: extracellular solute-binding protein family 5; SPTR: Extracellular solute-binding protein family 5; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_004058506.1	COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: tra:Trad_1719 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004058507.1	COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: tra:Trad_1720 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004058508.1	COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: tra:Trad_1721 amidohydrolase; PFAM: amidohydrolase; SPTR: Amidohydrolase; PFAM: Amidohydrolase family
YP_004058509.1	COGs: COG0025 NhaP-type Na+/H+ and K+/H+ antiporter; InterPro IPR006153; KEGG: dal:Dalk_1995 sodium/hydrogen exchanger; PFAM: sodium/hydrogen exchanger; SPTR: Sodium/hydrogen exchanger; PFAM: Sodium/hydrogen exchanger family; TC 2.A.36
YP_004058510.1	COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR006402: IPR006439: IPR005834: IPR005833; KEGG: msv:Mesil_1068 HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
YP_004058511.1	COGs: COG0599 gamma-carboxymuconolactone decarboxylase subunit; InterPro IPR003779; KEGG: ttj:TTHA1508 gamma-carboxymuconolactone decarboxylase; PFAM: Carboxymuconolactone decarboxylase; SPTR: 4-carboxymuconolactone decarboxylase; PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain
YP_004058512.1	KEGG: msv:Mesil_0425 transcriptional regulator, MerR family; SPTR: Putative transcriptional regulator, MerR family
YP_004058513.1	COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterPro IPR001623: IPR018253: IPR002939: IPR003095; KEGG: msv:Mesil_0426 chaperone DnaJ domain protein; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: Chaperone DnaJ domain protein; PFAM: DnaJ domain; DnaJ C terminal region; TIGRFAM: chaperone protein DnaJ
YP_004058514.1	COGs: COG0576 Molecular chaperone GrpE (heat shock protein); InterPro IPR000740; KEGG: tth:TTC1126 GrpE protein; PFAM: GrpE protein; SPTR: Protein grpE; PFAM: GrpE
YP_004058515.1	COGs: COG0443 Molecular chaperone; InterPro IPR012725: IPR018181: IPR013126: IPR001023; KEGG: ttj:TTHA1491 molecular chaperone DnaK; PFAM: Heat shock protein 70; SPTR: Chaperone protein dnaK; TIGRFAM: chaperone protein DnaK; PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK
YP_004058516.1	COGs: COG0465 ATP-dependent Zn protease; InterProIPR003960: IPR005936: IPR003959: IPR000642: IPR 003593; KEGG: msv:Mesil_0429 ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; PRIAM: Microtubule-severing ATPase; SMART: AAA ATPase; SPTR: ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: FtsH Extracellular; Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH
YP_004058517.1	InterPro IPR010916: IPR012867; KEGG: cse:Cseg_0200 hypothetical protein; PFAM: protein of unknown function DUF1648; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1648)
YP_004058518.1	COGs: COG2222 phosphosugar isomerase; InterPro IPR001347; KEGG: msv:Mesil_0290 glutamine--fructose-6-phosphate transaminase (isomerizing); PFAM: sugar isomerase (SIS); PRIAM: Glutamine--fructose-6-phosphate transaminase (isomerizing); SPTR: Glutamine--fructose-6-phosphate transaminase (Isomerizing); PFAM: SIS domain
YP_004058519.1	COGs: COG1820 N-acetylglucosamine-6-phosphate deacetylase; InterPro IPR003764: IPR006680; KEGG: msv:Mesil_0289 N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; PRIAM: N-acetylglucosamine-6-phosphate deacetylase; SPTR: N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: Amidohydrolase family; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase
YP_004058520.1	COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR016166: IPR006094; KEGG: msv:Mesil_3027 glycolate oxidase subunit GlcE; PFAM: FAD linked oxidase domain protein; SPTR: Putative glycolate oxidase subunit GlcE
YP_004058521.1	COGs: COG2272 Carboxylesterase type B; InterPro IPR002018: IPR000997; KEGG: mrb:Mrub_0723 carboxylesterase; PFAM: Carboxylesterase type B; SPTR: Carboxylesterase; PFAM: Carboxylesterase
YP_004058522.1	COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: mrb:Mrub_2054 MscS mechanosensitive ion channel; PFAM: MscS Mechanosensitive ion channel; SPTR: MscS Mechanosensitive ion channel; PFAM: Mechanosensitive ion channel
YP_004058523.1	COGs: COG0416 Fatty acid/phospholipid biosynthesis enzyme; InterPro IPR012281: IPR003664; KEGG: ttj:TTHA1746 glycerol-3-phosphate acyltransferase PlsX; PFAM: fatty acid synthesis plsX protein; SPTR: Phosphate acyltransferase; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: Fatty acid synthesis protein; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX
YP_004058524.1	COGs: COG3118 Thioredoxin domain-containing protein; InterProIPR017936: IPR017937: IPR005746: IPR013766: IPR 006662; KEGG: msv:Mesil_3022 thioredoxin; PFAM: Thioredoxin domain-containing protein; SPTR: Thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin; TIGRFAM: thioredoxin
YP_004058525.1	InterPro IPR005500; KEGG: msv:Mesil_3021 protein of unknown function DUF309; PFAM: protein of unknown function DUF309; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF309)
YP_004058526.1	KEGG: azo:azo2639 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058527.1	COGs: COG2070 Dioxygenase related to 2-nitropropane dioxygenase; InterPro IPR004136; KEGG: ttj:TTHA0103 oxidoreductase; PFAM: 2-nitropropane dioxygenase NPD; SPTR: 2-nitropropane dioxygenase; PFAM: 2-nitropropane dioxygenase
YP_004058528.1	COGs: COG1509 Lysine 2 3-aminomutase; InterPro IPR007197; KEGG: abo:ABO_1817 L-lysine 2,3-aminomutase, putative; PFAM: Radical SAM domain protein; SPTR: Radical SAM domain protein; TIGRFAM: KamA family protein
YP_004058529.1	KEGG: mrb:Mrub_1206 ThiJ/PfpI domain-containing protein; SPTR: ThiJ/PfpI domain protein
YP_004058530.1	COGs: COG0012 GTPase probable translation factor; InterPro IPR004396: IPR002917: IPR013029: IPR006073; KEGG: mrb:Mrub_1204 GTP-binding protein YchF; PFAM: protein of unknown function DUF933; GTP-binding protein HSR1-related; SPTR: GTP-binding protein YchF; TIGRFAM: GTP-binding protein YchF; PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF
YP_004058531.1	KEGG: rbi:RB2501_07705 hypothetical protein; SPTR: Membrane protein-like protein
YP_004058532.1	COGs: COG3258 Cytochrome c; InterPro IPR009056: IPR003088; KEGG: ant:Arnit_2099 cytochrome c class I; PFAM: cytochrome c class I; SPTR: Probable cytochrome c; PFAM: Cytochrome c
YP_004058533.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: ttr:Tter_2094 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; SPTR: Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_004058534.1	COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterProIPR005467: IPR003660: IPR003661: IPR003594: IPR 004358; KEGG: afw:Anae109_4376 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SPTR: Histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_004058535.1	COGs: COG2984 ABC-type uncharacterized transport system periplasmic component; InterPro IPR007487; KEGG: sth:STH2089 hypothetical protein; PFAM: protein of unknown function DUF534; SPTR: Putative uncharacterized protein; PFAM: ABC transporter substrate binding protein
YP_004058536.1	InterPro IPR002052: IPR011701; KEGG: msv:Mesil_2019 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily
YP_004058537.1	COGs: COG0796 Glutamate racemase; InterPro IPR004391: IPR018187: IPR015942; KEGG: tth:TTC1280 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; PRIAM: Glutamate racemase; SPTR: Glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase
YP_004058538.1	COGs: COG0689 RNase PH; InterPro IPR018336: IPR002381: IPR001247: IPR015847; KEGG: mrb:Mrub_1106 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: Ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease family, domain 1; TIGRFAM: ribonuclease PH
YP_004058539.1	COGs: COG0127 Xanthosine triphosphate pyrophosphatase; InterPro IPR020922: IPR002637; KEGG: ttj:TTHA1654 deoxyribonucleotide triphosphate pyrophosphatase; PFAM: Ham1 family protein; SPTR: Nucleoside-triphosphatase; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family
YP_004058540.1	KEGG: ttj:TTHA1653 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058541.1	COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005269; KEGG: mrb:Mrub_2968 Rossmann fold nucleotide-binding protein; PFAM: Conserved hypothetical protein CHP00730; SPTR: Rossmann fold nucleotide-binding protein; PFAM: Possible lysine decarboxylase; TIGRFAM: conserved hypothetical protein, DprA/Smf-related, family 1; conserved hypothetical protein, DprA/Smf-related, family 2
YP_004058542.1	KEGG: mrb:Mrub_1629 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058543.1	COGs: COG2313 Uncharacterized protein involved in pigment biosynthesis; InterPro IPR007342; KEGG: mrb:Mrub_1065 indigoidine synthase A family protein; PFAM: Indigoidine synthase A family protein; SPTR: Indigoidine synthase A family protein; PFAM: Indigoidine synthase A like protein
YP_004058544.1	COGs: COG1426 conserved hypothetical protein; InterPro IPR013229; KEGG: ttj:TTHA1176 hypothetical protein; PFAM: PEGA domain protein; SPTR: Putative uncharacterized protein TTHA1176; PFAM: PEGA domain
YP_004058545.1	COGs: COG0621 2-methylthioadenine synthetase; InterProIPR005840: IPR002792: IPR013848: IPR020612: IPR 005839: IPR007197: IPR006638; KEGG: mrb:Mrub_1063 MiaB-like tRNA modifying enzyme YliG; PFAM: protein of unknown function UPF0004; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: MiaB-like tRNA modifying enzyme YliG; TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme YliG, TIGR01125; RNA modification enzyme, MiaB family
YP_004058546.1	COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR003148: IPR006037: IPR006036; KEGG: ttj:TTHA1174 potassium transporter peripheral membrane component; PFAM: TrkA-N domain protein; TrkA-C domain protein; SPTR: TRK potassium uptake system protein (TrkA); PFAM: TrkA-N domain; TrkA-C domain
YP_004058547.1	COGs: COG0168 Trk-type K+ transport systems membrane components; InterPro IPR003445; KEGG: ttj:TTHA1173 trk system potassium uptake protein (TrkG); PFAM: cation transporter; SPTR: Cation transporter; PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family
YP_004058548.1	KEGG: mbu:Mbur_1752 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058549.1	COGs: COG3509 Poly(3-hydroxybutyrate) depolymerase; KEGG: cvi:CV_1782 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Esterase PHB depolymerase
YP_004058550.1	KEGG: tth:TTC0027 hypothetical protein; SPTR: Hypothetical membrane spanning protein
YP_004058551.1	InterPro IPR002047; KEGG: ttj:TTHA0396 hypothetical protein; SPTR: Putative uncharacterized protein TTHA0396
YP_004058552.1	COGs: COG0795 permease; InterPro IPR005495; KEGG: mrb:Mrub_2345 permease YjgP/YjgQ family protein; PFAM: permease YjgP/YjgQ family protein; SPTR: Permease YjgP/YjgQ family protein; PFAM: Predicted permease YjgP/YjgQ family
YP_004058553.1	COGs: COG0795 permease; InterPro IPR005495; KEGG: mrb:Mrub_2344 permease YjgP/YjgQ family protein; PFAM: permease YjgP/YjgQ family protein; SPTR: Permease YjgP/YjgQ family protein; PFAM: Predicted permease YjgP/YjgQ family
YP_004058554.1	COGs: COG4912 DNA alkylation repair protein; InterPro IPR014825; KEGG: cpb:Cphamn1_0516 DNA alkylation repair enzyme; PFAM: DNA alkylation repair enzyme; SPTR: DNA alkylation repair enzyme; PFAM: DNA alkylation repair enzyme
YP_004058555.1	COGs: COG3370 conserved hypothetical protein; KEGG: hya:HY04AAS1_1072 protein of unknown function DUF1291; SPTR: Putative uncharacterized protein; PFAM: DsrE/DsrF-like family
YP_004058556.1	KEGG: ttj:TTHA0404 hypothetical protein; SPTR: Tetratricopeptide TPR_2 repeat protein
YP_004058557.1	COGs: COG0465 ATP-dependent Zn protease; InterProIPR003960: IPR005936: IPR003959: IPR000642: IPR 003593; KEGG: msv:Mesil_0660 ATP-dependent metalloprotease FtsH; PFAM: AAA ATPase central domain protein; peptidase M41; PRIAM: Microtubule-severing ATPase; SMART: AAA ATPase; SPTR: ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: FtsH Extracellular; Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH
YP_004058558.1	COGs: COG0666 FOG: Ankyrin repeat; InterPro IPR002110: IPR020683; KEGG: tva:TVAG_470020 ankyrin repeat protein; PFAM: Ankyrin; SPTR: FOG: Ankyrin repeat; PFAM: Ankyrin repeat
YP_004058559.1	COGs: COG0666 FOG: Ankyrin repeat; InterPro IPR002110: IPR020683; KEGG: tva:TVAG_309070 ankyrin repeat protein; PFAM: Ankyrin; SMART: Ankyrin; SPTR: FOG: Ankyrin repeat; PFAM: Ankyrin repeat
YP_004058560.1	KEGG: cpc:Cpar_1002 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF87
YP_004058561.1	COGs: COG1181 D-alanine-D-alanine ligase and related ATP-grasp protein; InterProIPR005905: IPR011761: IPR000291: IPR011127: IPR 011095; KEGG: ttj:TTHA1587 D-alanyl-alanine synthetase A; PFAM: D-alanine--D-alanine ligase domain protein; PRIAM: D-alanine--D-alanine ligase; SPTR: D-alanine--D-alanine ligase; TIGRFAM: D-alanine/D-alanine ligase; PFAM: D-ala D-ala ligase C-terminus; D-ala D-ala ligase N-terminus; TIGRFAM: D-alanine--D-alanine ligase
YP_004058562.1	COGs: COG0193 Peptidyl-tRNA hydrolase; InterPro IPR001328: IPR018171; KEGG: tra:Trad_2153 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase; PRIAM: Aminoacyl-tRNA hydrolase; SPTR: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase
YP_004058563.1	COGs: COG1825 Ribosomal protein L25 (general stress protein Ctc); InterPro IPR001021: IPR020055; KEGG: ttj:TTHA1589 50S ribosomal protein L25/general stress protein Ctc; PFAM: Ribosomal protein L25-like; SPTR: 50S ribosomal protein L25; TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form
YP_004058564.1	COGs: COG0462 Phosphoribosylpyrophosphate synthetase; InterPro IPR000842: IPR005946: IPR000836; KEGG: msv:Mesil_0764 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; PRIAM: Ribose-phosphate diphosphokinase; SPTR: Ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase
YP_004058565.1	COGs: COG0775 Nucleoside phosphorylase; InterPro IPR010049: IPR000845; KEGG: mrb:Mrub_1054 adenosylhomocysteine nucleosidase; PFAM: purine or other phosphorylase family 1; PRIAM: Adenosylhomocysteine nucleosidase; SPTR: Adenosylhomocysteine nucleosidase; TIGRFAM: MTA/SAH nucleosidase; PFAM: Phosphorylase superfamily; TIGRFAM: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
YP_004058566.1	COGs: COG1854 LuxS protein involved in autoinducer AI2 synthesis; InterPro IPR003815; KEGG: mrb:Mrub_1059 quorum-sensing autoinducer 2 (AI-2), LuxS; PFAM: LuxS protein; PRIAM: S-ribosylhomocysteine lyase; SPTR: S-ribosylhomocysteine lyase; PFAM: S-Ribosylhomocysteinase (LuxS)
YP_004058567.1	KEGG: sto:ST2019 acetyl-CoA synthetase; SPTR: Putative uncharacterized protein
YP_004058568.1	COGs: COG0038 Chloride channel protein EriC; InterPro IPR001807: IPR000644; KEGG: afr:AFE_0815 voltage-gated chloride channel; PFAM: Cl- channel voltage-gated family protein; CBS domain containing protein; SPTR: Chloride channel core; PFAM: Voltage gated chloride channel
YP_004058569.1	KEGG: rop:ROP_pROB01-03100 ABC transporter permease protein; SPTR: Putative ABC transporter permease protein
YP_004058570.1	COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR002173: IPR011877: IPR011611: IPR002139; KEGG: msv:Mesil_0220 ribokinase; PFAM: PfkB domain protein; SPTR: Ribokinase; TIGRFAM: ribokinase; PFAM: pfkB family carbohydrate kinase; TIGRFAM: ribokinase
YP_004058571.1	COGs: COG0376 Catalase (peroxidase I); InterPro IPR000763: IPR002016: IPR019793: IPR019794; KEGG: tcu:Tcur_1936 catalase/peroxidase HPI; PFAM: Haem peroxidase; SPTR: Catalase-peroxidase; TIGRFAM: catalase/peroxidase HPI; PFAM: Peroxidase; TIGRFAM: catalase/peroxidase HPI
YP_004058572.1	COGs: COG3004 Na+/H+ antiporter; InterPro IPR004670; KEGG: msv:Mesil_2568 Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter NhaA; SPTR: Na+/H+ antiporter NhaA; TIGRFAM: Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter 1; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); Na+/H+ antiporter NhaA; TC 2.A.33.1.1
YP_004058573.1	COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: dge:Dgeo_2727 ferric uptake regulator family protein; PFAM: ferric-uptake regulator; SPTR: Ferric uptake regulator, Fur family; PFAM: Ferric uptake regulator family
YP_004058574.1	COGs: COG2193 Bacterioferritin (cytochrome b1); InterPro IPR009040: IPR008331; KEGG: ttj:TTHA1482 bacterioferritin; PFAM: Ferritin Dps family protein; SPTR: Bacterioferritin; PFAM: Ferritin-like domain
YP_004058575.1	KEGG: mrb:Mrub_1612 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058576.1	COGs: COG3899 ATPase; InterPro IPR005158: IPR011704; KEGG: msv:Mesil_0215 transcriptional activator domain protein; PFAM: transcriptional activator domain; ATPase associated with various cellular activities AAA_5; SPTR: Transcriptional activator domain protein; PFAM: Bacterial transcriptional activator domain
YP_004058577.1	KEGG: bur:Bcep18194_B1068 haemagglutinin-like; SPTR: Haemagglutinin-like
YP_004058578.1	KEGG: rrs:RoseRS_1621 FHA domain-containing protein; SPTR: Putative uncharacterized protein
YP_004058579.1	KEGG: msv:Mesil_3344 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058580.1	COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: tra:Trad_2970 MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; SPTR: MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: MatE; TIGRFAM: efflux protein, MATE family
YP_004058581.1	KEGG: rsl:RPSI07_0137 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058582.1	COGs: COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase; InterPro IPR004424: IPR006204: IPR013750; KEGG: msv:Mesil_0884 4-diphosphocytidyl-2C-methyl-D-erythritolkinase; PFAM: GHMP kinase; GHMP kinase domain protein; PRIAM: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; SPTR:4-diphosphocytidyl-2C-methyl-D-erythritolkinas e; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase
YP_004058583.1	COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: hoh:Hoch_2634 nitroreductase; PFAM: nitroreductase; SPTR: Nitroreductase family protein; PFAM: Nitroreductase family
YP_004058584.1	KEGG: mem:Memar_0599 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058585.1	KEGG: mrb:Mrub_0015 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058586.1	KEGG: msv:Mesil_0019 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058587.1	COGs: COG1154 Deoxyxylulose-5-phosphate synthase; InterPro IPR005477: IPR020826: IPR005475: IPR005476; KEGG: ttj:TTHA0006 1-deoxy-D-xylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain-containing protein; SPTR: 1-deoxy-D-xylulose-5-phosphate synthase; TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase
YP_004058588.1	COGs: COG1195 Recombinational DNA repair ATPase (RecF pathway); InterPro IPR018078: IPR001238: IPR003395; KEGG: msv:Mesil_0053 DNA replication and repair protein RecF; PFAM: SMC domain protein; SPTR: DNA replication and repair protein RecF; TIGRFAM: DNA replication and repair protein RecF; PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein
YP_004058589.1	COGs: COG2110 phosphatase homologous to the C-terminal domain of histone macroH2A1; InterPro IPR002589; KEGG: ttj:TTHA0132 hypothetical protein; PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein; SPTR: Hypothetical conserved protein; PFAM: Macro domain
YP_004058590.1	InterPro IPR007922; KEGG: msv:Mesil_0055 protein of unknown function DUF721; PFAM: protein of unknown function DUF721; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF721)
YP_004058591.1	COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR005785: IPR001544; KEGG: tth:TTC1870 branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; SPTR: Branched-chain amino acid aminotransferase; TIGRFAM: branched-chain amino acid aminotransferase; PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group I
YP_004058592.1	COGs: COG2814 Arabinose efflux permease; InterPro IPR011701: IPR001958; KEGG: msv:Mesil_0314 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily
YP_004058593.1	COGs: COG1528 Ferritin-like protein; InterPro IPR009040: IPR008331; KEGG: mrb:Mrub_0917 ferritin Dps family protein; PFAM: Ferritin Dps family protein; SPTR: Ferritin Dps family protein; PFAM: Ferritin-like domain
YP_004058594.1	COGs: COG0225 Peptide methionine sulfoxide reductase; InterPro IPR002569; KEGG: rmr:Rmar_2736 peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; PRIAM: Peptide-methionine (S)-S-oxide reductase; SPTR: Peptide methionine sulfoxide reductase msrA; TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase
YP_004058595.1	KEGG: min:Minf_1804 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058596.1	COGs: COG2206 HD-GYP domain; InterPro IPR003607; KEGG: adg:Adeg_0458 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region; SPTR: Metal dependent phosphohydrolase; PFAM: HD domain
YP_004058597.1	KEGG: gau:GAU_0392 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: conserved repeat domain
YP_004058598.1	COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016160: IPR015590; KEGG: msv:Mesil_3300 short-chain dehydrogenase/reductase SDR; PFAM: Aldehyde Dehydrogenase; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: Aldehyde dehydrogenase family
YP_004058599.1	COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198: IPR002347; KEGG: dfe:Dfer_4671 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase
YP_004058600.1	COGs: COG0174 Glutamine synthetase; InterPro IPR008146; KEGG: mrb:Mrub_0773 glutamate--ammonia ligase; PFAM: glutamine synthetase catalytic region; PRIAM: Glutamate--ammonia ligase; SPTR: Glutamate--ammonia ligase; PFAM: Glutamine synthetase, catalytic domain
YP_004058601.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: ttj:TTHA0941 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter
YP_004058602.1	InterPro IPR013525; KEGG: tth:TTC0575 hypothetical protein; PFAM: ABC transporter; SPTR: Hypothetical conserved protein; PFAM: ABC transporter
YP_004058603.1	COGs: COG0820 Fe-S-cluster redox enzyme; InterPro IPR004383: IPR007197: IPR006638; KEGG: tth:TTC1574 ribosomal RNA large subunit methyltransferase N; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Ribosomal RNA large subunit methyltransferase N; TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM enzyme, Cfr family
YP_004058604.1	COGs: COG2076 Membrane transporter of cations and cationic drugs; InterPro IPR000390; KEGG: bur:Bcep18194_A4701 small multidrug resistance protein; PFAM: small multidrug resistance protein; SPTR: Putative mebrane transport protein; PFAM: Small Multidrug Resistance protein
YP_004058605.1	InterPro IPR000866; KEGG: dge:Dgeo_1960 hypothetical protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Thioredoxin; PFAM: AhpC/TSA family
YP_004058606.1	KEGG: msv:Mesil_1663 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058607.1	COGs: COG0584 Glycerophosphoryl diester phosphodiesterase; InterPro IPR004129; KEGG: mrd:Mrad2831_5122 glycerophosphoryl diester phosphodiesterase; PFAM: glycerophosphoryl diester phosphodiesterase; SPTR: Glycerophosphoryl diester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase family
YP_004058608.1	InterPro IPR000601; KEGG: aeh:Mlg_2372 hypothetical protein; PFAM: PKD domain containing protein; SPTR: Putative uncharacterized protein
YP_004058609.1	COGs: COG1193 Mismatch repair ATPase (MutS family); InterPro IPR005747: IPR002625: IPR000432: IPR007696; KEGG: mrb:Mrub_1104 MutS2 family protein; PFAM: Smr protein/MutS2; DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; Smr protein/MutS2; SPTR: MutS2 family protein; PFAM: MutS domain V; Smr domain; TIGRFAM: MutS2 family protein
YP_004058610.1	InterPro IPR003856; KEGG: msv:Mesil_2715 lipopolysaccharide biosynthesis protein; PFAM: lipopolysaccharide biosynthesis protein; SPTR: Lipopolysaccharide biosynthesis protein; PFAM: Chain length determinant protein
YP_004058611.1	COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: mrb:Mrub_2783 hypothetical protein; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; PFAM: Predicted permease
YP_004058612.1	COGs: COG3584 conserved hypothetical protein; KEGG: mrb:Mrub_2784 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058613.1	InterPro IPR002121; KEGG: car:cauri_1389 hypothetical protein; PFAM: HRDC domain protein; SPTR: Putative membrane protein
YP_004058614.1	KEGG: ttj:TTHA0213 hypothetical protein; SPTR: Putative uncharacterized protein TTHA0213
YP_004058615.1	COGs: COG1461 kinase related to dihydroxyacetone kinase; InterPro IPR019986: IPR004007; KEGG: mrb:Mrub_2785 Dak phosphatase; PFAM: Dak phosphatase; SPTR: Dak phosphatase; TIGRFAM: DAK2 domain fusion protein YloV; PFAM: DAK2 domain; TIGRFAM: DAK2 domain fusion protein YloV
YP_004058616.1	COGs: COG1302 conserved hypothetical protein; InterPro IPR005531; KEGG: msv:Mesil_2996 protein of unknown function DUF322; PFAM: protein of unknown function DUF322; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF322)
YP_004058617.1	KEGG: msv:Mesil_3010 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3108)
YP_004058618.1	COGs: COG0686 Alanine dehydrogenase; InterPro IPR008143: IPR008141: IPR007886: IPR007698; KEGG: ttj:TTHA0216 alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; PRIAM: Alanine dehydrogenase; SPTR: Alanine dehydrogenase; TIGRFAM: alanine dehydrogenase; PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase
YP_004058619.1	COGs: COG1522 Transcriptional regulators; InterPro IPR000485: IPR000835: IPR019887: IPR019888; KEGG: msv:Mesil_3008 transcriptional regulator, AsnC family; PFAM: Transcription regulator AsnC-type-like; regulatory protein MarR; SMART: Transcription regulator AsnC-type; SPTR: Transcriptional regulator, AsnC family; PFAM: MarR family; AsnC family
YP_004058620.1	COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR018376: IPR001753; KEGG: mrb:Mrub_1217 enoyl-CoA hydratase/isomerase; PFAM: Enoyl-CoA hydratase/isomerase; SPTR: Enoyl-CoA hydratase/isomerase; PFAM: Enoyl-CoA hydratase/isomerase family
YP_004058621.1	COGs: COG2326 conserved hypothetical protein; InterPro IPR016898: IPR005660; KEGG: dge:Dgeo_2247 hypothetical protein; PFAM: protein of unknown function DUF344; SPTR: Predicted deoxynucleoside kinase; PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate:nucleotide phosphotransferase, PPK2 family
YP_004058622.1	KEGG: mxa:MXAN_4856 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058623.1	KEGG: mxa:MXAN_4856 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058624.1	COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198: IPR002347; KEGG: azl:AZL_d01910 NAD(P)-binding short-chain dehydrogenase/reductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: NAD(P)-binding short-chain dehydrogenase/reductase; PFAM: short chain dehydrogenase
YP_004058625.1	COGs: COG1045 Serine acetyltransferase; InterPro IPR001451; KEGG: sat:SYN_01257 serine acetyltransferase; PRIAM: Serine O-acetyltransferase; SPTR: Serine acetyltransferase; TIGRFAM: serine O-acetyltransferase
YP_004058626.1	COGs: COG5322 dehydrogenase; InterPro IPR003811: IPR019760: IPR006151; KEGG: msv:Mesil_1254 protein of unknown function DUF205; PFAM: protein of unknown function DUF205; Shikimate/quinate 5-dehydrogenase; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF205); Shikimate / quinate 5-dehydrogenase; TIGRFAM: acyl-phosphate glycerol 3-phosphate acyltransferase
YP_004058627.1	COGs: COG2426 membrane protein; InterPro IPR009577; KEGG: ttj:TTHA0554 small multidrug export protein; PFAM: small multi-drug export protein; SPTR: Hypothetical conserved protein; PFAM: Putative small multi-drug export protein
YP_004058628.1	COGs: COG0292 Ribosomal protein L20; InterPro IPR005813; KEGG: ttj:TTHA0553 50S ribosomal protein L20; PFAM: ribosomal protein L20; SPTR: 50S ribosomal protein L20; TIGRFAM: ribosomal protein L20; PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20
YP_004058629.1	InterPro IPR001706: IPR021137; KEGG: msv:Mesil_1252 ribosomal protein L35; PFAM: Ribosomal protein L35; SPTR: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35
YP_004058630.1	COGs: COG0290 Translation initiation factor 3 (IF-3); InterPro IPR001288: IPR019814: IPR019815; KEGG: msv:Mesil_1249 translation initiation factor IF-3; PFAM: Translation initiation factor 3-like; SPTR: Translation initiation factor IF-3; TIGRFAM: translation initiation factor IF-3; manually curated; PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3
YP_004058631.1	KEGG: mkm:Mkms_3174 transport protein; SPTR: 2-keto-3-deoxygluconate kinase
YP_004058632.1	COGs: COG0775 Nucleoside phosphorylase; InterPro IPR019963: IPR000845; KEGG: mrb:Mrub_0986 purine or other phosphorylase family 1; PFAM: purine or other phosphorylase family 1; SPTR: Purine or other phosphorylase family 1; TIGRFAM: futalosine nucleosidase; PFAM: Phosphorylase superfamily; TIGRFAM: futalosine nucleosidase
YP_004058633.1	KEGG: dra:DR_1218 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058634.1	COGs: COG0370 Fe2+ transport system protein B; InterProIPR005225: IPR003373: IPR002917: IPR011619: IPR 011642: IPR011640; KEGG: dge:Dgeo_0894 ferrous iron transport protein B; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain-containing protein; nucleoside recognition domain protein; Ferrous iron transport B domain-containing protein; SPTR: Ferrous iron transport protein B, GTPase; TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain
YP_004058635.1	COGs: COG1918 Fe2+ transport system protein A; InterPro IPR007167; KEGG: acp:A2cp1_3411 FeoA family protein; PFAM: FeoA family protein; SPTR: FeoA family protein; PFAM: FeoA domain
YP_004058636.1	COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterPro IPR002942: IPR018496: IPR000748: IPR006145; KEGG: ttj:TTHA0219 ribosomal large subunit pseudouridine synthase B; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein; SPTR: Pseudouridine synthase; PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase
YP_004058637.1	KEGG: ttr:Tter_0222 peptidase M50; SPTR: NnrS family protein
YP_004058638.1	COGs: COG0130 Pseudouridine synthase; InterPro IPR014780: IPR002501; KEGG: ttj:TTHA0217 tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; SPTR: tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: tRNA Pseudouridine synthase II, C terminal; TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase
YP_004058639.1	COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182; KEGG: gwc:GWCH70_0239 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family
YP_004058640.1	COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107; KEGG: msv:Mesil_0345 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein; SPTR: Band 7 protein; PFAM: SPFH domain / Band 7 family
YP_004058641.1	COGs: COG4877 conserved hypothetical protein; KEGG: tcu:Tcur_1901 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058642.1	KEGG: msv:Mesil_3040 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058643.1	InterPro IPR003675; KEGG: tth:TT_P0123 hypothetical protein; PFAM: Abortive infection protein; SPTR: Hypothetical membrane spanning protein; PFAM: CAAX amino terminal protease family
YP_004058644.1	KEGG: ttu:TERTU_0080 cytochrome c oxidase assembly protein; SPTR: Putative uncharacterized protein
YP_004058645.1	COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR005256: IPR006805: IPR015890: IPR019999; KEGG: mrb:Mrub_2940 anthranilate synthase component I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; PRIAM: Anthranilate synthase; SPTR: Anthranilate synthase component I; TIGRFAM: anthranilate synthase component I; PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: anthranilate synthase component I, non-proteobacterial lineages
YP_004058646.1	KEGG: dge:Dgeo_0984 S23 ribosomal; SPTR: 23S rRNA gene intervening Orf family protein; PFAM: S23 ribosomal protein
YP_004058647.1	COGs: COG0512 Anthranilate/para-aminobenzoate synthase component II; InterProIPR017926: IPR006221: IPR000991: IPR006220: IPR 011702: IPR001317; KEGG: mrb:Mrub_2938 glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; SPTR: Glutamine amidotransferase of anthranilate synthase; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase
YP_004058648.1	COGs: COG0547 Anthranilate phosphoribosyltransferase; InterPro IPR005940: IPR017459: IPR000312; KEGG: msv:Mesil_0337 anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; SPTR: Anthranilate phosphoribosyltransferase; TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase
YP_004058649.1	KEGG: tth:TTC1497 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058650.1	KEGG: gob:Gobs_1648 binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component
YP_004058651.1	COGs: COG0187 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit; InterProIPR018522: IPR003594: IPR013506: IPR006171: IPR 002288: IPR001241: IPR000565; KEGG: ttj:TTHA1586 DNA gyrase, subunit B; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain-containing protein; DNA gyrase subunit B domain protein; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; SPTR: DNA gyrase subunit B; PFAM: Toprim domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit
YP_004058652.1	COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterPro IPR011538: IPR019554: IPR019575; KEGG: sma:SAV_1835 NADH dehydrogenase I chain F; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; PRIAM: NADH dehydrogenase (quinone); SPTR: Putative NADH dehydrogenase I chain F (Complex I); PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain
YP_004058653.1	COGs: COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); InterPro IPR001041: IPR017896: IPR017900; KEGG: sma:SAV_1836 NADH dehydrogenase I chain G; PFAM: ferredoxin; SPTR: Putative NADH dehydrogenase I chain G (Complex I); PFAM: 2Fe-2S iron-sulfur cluster binding domain
YP_004058654.1	COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR006655: IPR002993: IPR006478: IPR006963: IPR 006656: IPR006657; KEGG: dba:Dbac_0167 formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; SPTR: Formate dehydrogenase, alpha subunit; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, archaeal-type
YP_004058655.1	COGs: COG0623 Enoyl-(acyl-carrier-protein); InterPro IPR002198: IPR002347; KEGG: mrb:Mrub_0266 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase
YP_004058656.1	COGs: COG0303 Molybdopterin biosynthesis enzyme; InterPro IPR020817: IPR005110: IPR001453: IPR005111; KEGG: ttj:TTHA0110 molybdopterin biosynthesis MoeA; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV; SPTR: Molybdopterin biosynthesis MoeA; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain
YP_004058657.1	KEGG: bph:Bphy_0004 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated
YP_004058658.1	COGs: COG3593 ATP-dependent endonuclease of the OLD family; InterPro IPR003395; KEGG: mfe:Mefer_0997 SMC domain protein; PFAM: SMC domain protein; SPTR: SMC domain protein
YP_004058659.1	COGs: COG0550 Topoisomerase IA; InterProIPR000380: IPR005733: IPR006171: IPR013497: IPR 013498: IPR006154: IPR003601: IPR003602; KEGG: msv:Mesil_2658 DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; DNA topoisomerase type IA zn finger domain protein; PRIAM: DNA topoisomerase; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein; SPTR: DNA topoisomerase I; TIGRFAM: DNA topoisomerase I; PFAM: Toprim domain; Topoisomerase DNA binding C4 zinc finger; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial
YP_004058660.1	InterPro IPR009056: IPR003088; KEGG: ttj:TTHA1423 cytochrome c-552 precursor; PFAM: cytochrome c class I; SPTR: Cytochrome c-552; PFAM: Cytochrome c
YP_004058661.1	COGs: COG2928 conserved hypothetical protein; InterPro IPR007462; KEGG: mrb:Mrub_1611 hypothetical protein; PFAM: protein of unknown function DUF502; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF502)
YP_004058662.1	KEGG: msv:Mesil_1262 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058663.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR017871: IPR005895: IPR003593; KEGG: msv:Mesil_0916 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter; TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter; TIGRFAM: heme ABC exporter, ATP-binding protein CcmA
YP_004058664.1	KEGG: tth:TTC1528 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF990)
YP_004058665.1	COGs: COG0315 Molybdenum cofactor biosynthesis enzyme; InterPro IPR002820; KEGG: msv:Mesil_0918 molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis protein MoaC; SPTR: Molybdenum cofactor biosynthesis protein C; TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: MoaC family; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC
YP_004058666.1	COGs: COG1802 Transcriptional regulators; InterPro IPR000524: IPR011711; KEGG: mrb:Mrub_2641 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; SPTR: Transcriptional regulator, GntR family; PFAM: Bacterial regulatory proteins, gntR family; FCD domain
YP_004058667.1	COGs: COG0506 Proline dehydrogenase; InterPro IPR008219: IPR002872; KEGG: msv:Mesil_3124 proline dehydrogenase; PFAM: Proline dehydrogenase; PRIAM: Proline dehydrogenase; SPTR: Proline dehydrogenase; PFAM: Proline dehydrogenase
YP_004058668.1	COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016160: IPR005932: IPR015590; KEGG: msv:Mesil_3126 delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: Delta-1-pyrroline-5-carboxylate dehydrogenase; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde dehydrogenase family; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative
YP_004058669.1	COGs: COG1669 nucleotidyltransferase; InterPro IPR002934; KEGG: ttj:TTHA1015 nucleotidyltransferase; PFAM: DNA polymerase beta domain protein region; SPTR: DNA polymerase beta domain protein region; PFAM: Nucleotidyltransferase domain
YP_004058670.1	InterPro IPR003675; KEGG: ttr:Tter_1477 abortive infection protein; PFAM: Abortive infection protein; SPTR: Abortive infection protein; PFAM: CAAX amino terminal protease family
YP_004058671.1	COGs: COG2905 signal-transduction protein containing cAMP-binding and CBS domains; InterPro IPR000644; KEGG: tra:Trad_1793 signal transduction protein with CBS domains; PFAM: CBS domain containing protein; SMART: CBS domain containing protein; SPTR: Putative signal transduction protein with CBS domains; PFAM: CBS domain
YP_004058672.1	COGs: COG2812 DNA polymerase III gamma/tau subunits; InterPro IPR012763: IPR003959: IPR001270: IPR003593; KEGG: mrb:Mrub_3026 DNA polymerase III subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; SPTR: DNA polymerase III, subunits gamma and tau; TIGRFAM: DNA polymerase III, subunits gamma and tau; manually curated; PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: DNA polymerase III, delta' subunit; DNA polymerase III, subunit gamma and tau
YP_004058673.1	COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: ttr:Tter_2599 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family
YP_004058674.1	COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR013027: IPR004099; KEGG: ttj:TTHA1835 NADH oxidase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: NADH oxidase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
YP_004058675.1	COGs: COG0526 Thiol-disulfide isomerase and thioredoxins; InterPro IPR017936: IPR017937: IPR000866; KEGG: msv:Mesil_0940 periplasmic protein thiol/disulfide oxidoreductase DsbE; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Thiol:disulfide interchange protein; PFAM: Redoxin
YP_004058676.1	COGs: COG1937 conserved hypothetical protein; InterPro IPR003735; KEGG: ttj:TTHA1719 copper homeostasis operon regulatory protein; PFAM: protein of unknown function DUF156; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised BCR, COG1937
YP_004058677.1	InterPro IPR006121: IPR017969; KEGG: ttj:TTHA1718 heavy metal binding protein; PFAM: Heavy metal transport/detoxification protein; SPTR: Heavy metal transport/detoxification protein; PFAM: Heavy-metal-associated domain
YP_004058678.1	COGs: COG0526 Thiol-disulfide isomerase and thioredoxins; InterPro IPR017936: IPR017937: IPR000866; KEGG: ttj:TTHA1728 hypothetical protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Putative uncharacterized protein TTHA1728; PFAM: Redoxin
YP_004058679.1	COGs: COG0526 Thiol-disulfide isomerase and thioredoxins; InterPro IPR017936: IPR017937: IPR000866; KEGG: ttj:TTHA1728 hypothetical protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Putative uncharacterized protein TTHA1728; PFAM: AhpC/TSA family
YP_004058680.1	COGs: COG0526 Thiol-disulfide isomerase and thioredoxins; InterPro IPR017936: IPR017937: IPR000866; KEGG: ttj:TTHA0840 thiol:disulfide interchange protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Thiol:disulfide interchange protein tlpA; PFAM: Prolipoprotein diacylglyceryl transferase; AhpC/TSA family
YP_004058681.1	COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR017867: IPR000106: IPR002115; KEGG: ttj:TTHA1180 low molecular weight phosphotyrosine protein phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: Protein-tyrosine phosphatase; PFAM: Low molecular weight phosphotyrosine protein phosphatase
YP_004058682.1	COGs: COG3001 conserved hypothetical protein; InterPro IPR016477; KEGG: msv:Mesil_0775 fructosamine/ketosamine-3-kinase; PFAM: Fructosamine/Ketosamine-3-kinase; SPTR: Fructosamine/Ketosamine-3-kinase; PFAM: Fructosamine kinase
YP_004058683.1	KEGG: mrb:Mrub_0439 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058684.1	InterPro IPR000864: IPR008454: IPR006626; KEGG: msv:Mesil_2801 conserved repeat domain protein; PFAM: Cna B domain protein; SPTR: Conserved repeat domain protein; PFAM: Cna protein B-type domain; TIGRFAM: conserved repeat domain
YP_004058685.1	InterPro IPR001434; KEGG: mrb:Mrub_0750 hypothetical protein; PFAM: protein of unknown function DUF11; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF11
YP_004058686.1	InterPro IPR001434; KEGG: msv:Mesil_2799 conserved repeat domain protein; PFAM: protein of unknown function DUF11; SPTR: Conserved repeat domain protein; TIGRFAM: conserved repeat domain protein; PFAM: Domain of unknown function DUF11; TIGRFAM: conserved repeat domain
YP_004058687.1	InterPro IPR018247: IPR001434; KEGG: ttj:TTHB180 hypothetical protein; PFAM: protein of unknown function DUF11; SPTR: Conserved repeat domain protein; TIGRFAM: conserved repeat domain protein; PFAM: Domain of unknown function DUF11; TIGRFAM: conserved repeat domain
YP_004058688.1	COGs: COG4719 conserved hypothetical protein; KEGG: msv:Mesil_2796 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF11; TIGRFAM: conserved repeat domain
YP_004058689.1	COGs: COG2005 N-terminal domain of molybdenum-binding protein; InterPro IPR000847; KEGG: msv:Mesil_0658 transcriptional regulator, ModE family; PFAM: regulatory protein LysR; SPTR: Putative transcriptional regulator, ModE family; PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: ModE molybdate transport repressor domain
YP_004058690.1	COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003439: IPR017871: IPR003593; KEGG: ttj:TTHA0071 ABC-transporter, ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC-transporter, ATP-binding subunit; PFAM: ABC transporter
YP_004058691.1	COGs: COG4662 ABC-type tungstate transport system periplasmic component; InterPro IPR000515; KEGG: tth:TTC1935 tungstate ABC transporter permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Tungstate ABC transporter permease; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004058692.1	COGs: COG2998 ABC-type tungstate transport system permease component; KEGG: ttj:TTHA0069 ABC transporter periplasmic protein; SPTR: ABC transporter periplasmic protein
YP_004058693.1	COGs: COG1098 RNA binding protein (contains ribosomal protein S1 domain); InterPro IPR003029; KEGG: msv:Mesil_0066 RNA binding S1 domain protein; PFAM: RNA binding S1 domain protein; SPTR: RNA binding S1 domain protein; PFAM: S1 RNA binding domain
YP_004058694.1	COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006089: IPR006092: IPR006091: IPR006090; KEGG: mrb:Mrub_0264 acyl-CoA dehydrogenase domain-containing protein; PFAM: acyl-CoA dehydrogenase domain-containing protein; SPTR: Acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain
YP_004058695.1	InterPro IPR001120: IPR012902; KEGG: mrb:Mrub_0898 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain
YP_004058696.1	COGs: COG2872 metal-dependent hydrolase related to alanyl-tRNA synthetase HxxxH domain; InterPro IPR018165: IPR018164: IPR012947; KEGG: msv:Mesil_0730 threonyl/alanyl tRNA synthetase SAD; PFAM: Threonyl/alanyl tRNA synthetase SAD; Alanyl-tRNA synthetase, class IIc-like; SPTR: Threonyl/alanyl tRNA synthetase SAD; PFAM: Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A)
YP_004058698.1	COGs: COG2366 Protein related to penicillin acylase; InterPro IPR014395: IPR002692; KEGG: tth:TTC1972 penicillin acylase; PFAM: peptidase S45 penicillin amidase; SPTR: Peptidase S45 penicillin amidase; PFAM: Penicillin amidase
YP_004058699.1	COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR000183: IPR002986: IPR002433; KEGG: msv:Mesil_0318 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; SPTR: Diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase
YP_004058700.1	COGs: COG2071 glutamine amidotransferase; InterPro IPR017926: IPR011697; KEGG: mrb:Mrub_0799 peptidase C26; PFAM: peptidase C26; SPTR: Peptidase C26; PFAM: Peptidase C26
YP_004058701.1	COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: tra:Trad_2910 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004058702.1	COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: tra:Trad_2911 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004058703.1	COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: tra:Trad_2912 extracellular solute-binding protein family 5; PFAM: extracellular solute-binding protein family 5; SPTR: Extracellular solute-binding protein family 5; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_004058704.1	COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: tra:Trad_2910 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004058705.1	COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: tra:Trad_2911 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component
YP_004058706.1	COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: tra:Trad_2912 extracellular solute-binding protein family 5; PFAM: extracellular solute-binding protein family 5; SPTR: Extracellular solute-binding protein family 5; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle
YP_004058707.1	COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198: IPR002347; KEGG: pfu:PF1899 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Putative 2-deoxy-d-gluconate 3-dehydrogenase; PFAM: short chain dehydrogenase
YP_004058708.1	COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR020904: IPR002198: IPR002347; KEGG: ttj:TTHA0693 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: D-beta-hydroxybutyrate dehydrogenase; PFAM: short chain dehydrogenase; TIGRFAM: 3-hydroxybutyrate dehydrogenase
YP_004058709.1	COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: ttj:TTHA1621 heat shock protein, class I; PFAM: heat shock protein Hsp20; SPTR: Heat shock protein Hsp20; PFAM: Hsp20/alpha crystallin family
YP_004058710.1	COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: tth:TTC1259 hydrolase; SPTR: Probable hydrolase; PFAM: Metallo-beta-lactamase superfamily
YP_004058711.1	COGs: COG1077 Actin-like ATPase involved in cell morphogenesis; InterPro IPR004753; KEGG: mrb:Mrub_2769 cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; SPTR: Cell shape determining protein, MreB/Mrl family; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family
YP_004058712.1	COGs: COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase; InterPro IPR010084: IPR013114; KEGG: mrb:Mrub_2765 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; SPTR: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ
YP_004058713.1	COGs: COG0795 permease; InterPro IPR005495; KEGG: ttj:TTHA1108 hypothetical protein; PFAM: permease YjgP/YjgQ family protein; SPTR: Hypothetical conserved membrane spanning protein; PFAM: Predicted permease YjgP/YjgQ family
YP_004058714.1	COGs: COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; InterPro IPR009695: IPR007235; KEGG: dge:Dgeo_1184 monogalactosyldiacylglycerol synthase; PFAM: Monogalactosyldiacylglycerol synthase; Glycosyltransferase 28 domain; SPTR: Monogalactosyldiacylglycerol synthase; PFAM: Glycosyltransferase family 28 C-terminal domain; Monogalactosyldiacylglycerol (MGDG) synthase
YP_004058715.1	COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: ddr:Deide_10520 polysaccharide deacetylase; PFAM: polysaccharide deacetylase; SPTR: Putative polysaccharide deacetylase; PFAM: Polysaccharide deacetylase
YP_004058716.1	InterPro IPR007016; KEGG: dge:Dgeo_0351 O-antigen polymerase; PFAM: O-antigen polymerase; SPTR: O-antigen polymerase; PFAM: O-Antigen ligase
YP_004058717.1	COGs: COG0467 RecA-superfamily ATPase implicated in signal transduction; InterPro IPR020588: IPR010624: IPR014774; KEGG: tal:Thal_0874 circadian clock protein, KaiC; PFAM: Circadian clock protein KaiC central region; SPTR: Putative circadian clock protein, KaiC; PFAM: KaiC; TIGRFAM: KaiC domain protein, AF_0795 family
YP_004058718.1	InterPro IPR013217; KEGG: tra:Trad_0309 methyltransferase type 12; PFAM: Methyltransferase type 12; SPTR: Methyltransferase type 12; PFAM: Methyltransferase domain
YP_004058719.1	COGs: COG2302 conserved hypothetical protein contains S4-like domain; InterPro IPR002942; KEGG: mrb:Mrub_2761 RNA-binding S4 domain-containing protein; PFAM: RNA-binding S4 domain protein; SPTR: RNA-binding S4 domain protein
YP_004058720.1	COGs: COG1349 Transcriptional regulators of sugar metabolism; InterPro IPR001034: IPR001969: IPR018356: IPR014036; KEGG: aba:Acid345_3908 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; SPTR: Transcriptional regulator, deoR family; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain
YP_004058721.1	COGs: COG0434 TIM-barrel enzyme; InterPro IPR005137; KEGG: jan:Jann_2112 photosystem I assembly BtpA; PFAM: photosystem I assembly BtpA; SPTR: Photosystem I assembly BtpA; PFAM: BtpA family; TIGRFAM: membrane complex biogenesis protein, BtpA family
YP_004058722.1	COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018483: IPR018484: IPR018485; KEGG: sno:Snov_3728 carbohydrate kinase, FGGY-like protein; PFAM: Carbohydrate kinase, FGGY-like; SPTR: Carbohydrate kinase, FGGY-like protein; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain
YP_004058723.1	COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR020904: IPR002198: IPR002347; KEGG: sno:Snov_3725 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase
YP_004058724.1	COGs: COG3253 conserved hypothetical protein; InterPro IPR010644; KEGG: mrb:Mrub_1404 chlorite dismutase; PFAM: Chlorite dismutase; SPTR: Chlorite dismutase; PFAM: Chlorite dismutase
YP_004058725.1	InterPro IPR019775; KEGG: bcv:Bcav_2782 Ig domain protein group 1 domain protein; SPTR: Putative uncharacterized protein
YP_004058726.1	KEGG: msv:Mesil_0480 cytoplasmic protein; SPTR: Putative cytoplasmic protein
YP_004058727.1	COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013342; KEGG: tth:TTC1473 muconate cycloisomerase; PFAM: Mandelate racemase/muconate lactonizing protein; SPTR: Muconate cycloisomerase; PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
YP_004058728.1	InterPro IPR011701; KEGG: msv:Mesil_0483 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily
YP_004058729.1	InterPro IPR013229; KEGG: dde:Dde_0944 hypothetical protein; PFAM: PEGA domain protein; SPTR: Putative S-layer domain protein; PFAM: PEGA domain
YP_004058731.1	InterPro IPR006683; KEGG: slo:Shew_3755 thioesterase superfamily protein; PFAM: thioesterase superfamily protein; SPTR: Thioesterase superfamily protein; PFAM: Thioesterase superfamily
YP_004058732.1	COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR018392: IPR016047: IPR002482; KEGG: mrb:Mrub_2495 peptidase M23; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: Peptidase M23; PFAM: Peptidase family M23; LysM domain
YP_004058733.1	InterPro IPR011701; KEGG: mrb:Mrub_3003 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: Multidrug resistance protein, putative
YP_004058734.1	COGs: COG1794 Aspartate racemase; InterPro IPR018187: IPR004380: IPR015942; KEGG: amd:AMED_7709 aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; SPTR: Aspartate racemase; TIGRFAM: aspartate racemase; PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: aspartate racemase
YP_004058735.1	COGs: COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase; InterPro IPR005259; KEGG: msv:Mesil_0035 primosomal protein N'; SPTR: Primosomal protein N'; TIGRFAM: primosomal protein N'; TIGRFAM: primosomal protein N'
YP_004058736.1	COGs: COG2852 conserved hypothetical protein; KEGG: npu:Npun_F2483 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF559)
YP_004058737.1	COGs: COG0390 ABC-type uncharacterized transport system permease component; InterPro IPR005226; KEGG: pin:Ping_0175 hypothetical protein; PFAM: Conserved hypothetical protein CHP00245; SPTR: Putative membrane protein; PFAM: Uncharacterised protein family (UPF0014); TIGRFAM: conserved hypothetical protein TIGR00245
YP_004058738.1	COGs: COG0366 Glycosidase; InterPro IPR006047: IPR006589; KEGG: dge:Dgeo_0611 alpha amylase, catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Alpha amylase, catalytic region; PFAM: Alpha amylase, catalytic domain
YP_004058739.1	COGs: COG0105 Nucleoside diphosphate kinase; InterPro IPR001564; KEGG: tth:TTC1798 nucleoside diphosphate kinase; PFAM: nucleoside diphosphate kinase; PRIAM: Nucleoside-diphosphate kinase; SMART: nucleoside diphosphate kinase; SPTR: Nucleoside diphosphate kinase; PFAM: Nucleoside diphosphate kinase
YP_004058740.1	COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR018170: IPR022272: IPR001395; KEGG: mrb:Mrub_0195 aldo/keto reductase; PFAM: aldo/keto reductase; SPTR: Aldo/keto reductase; PFAM: Aldo/keto reductase family
YP_004058741.1	COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: mrb:Mrub_1793 ABC transporter-like protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter; PFAM: ABC transporter
YP_004058742.1	InterPro IPR013525: IPR000412; KEGG: mrb:Mrub_1792 ABC transporter; PFAM: ABC transporter; SPTR: ABC transporter; PFAM: ABC transporter
YP_004058743.1	KEGG: rmr:Rmar_1092 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated
YP_004058744.1	COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004838: IPR001176: IPR004839; KEGG: ttj:TTHA0046 aspartate aminotransferase; PFAM: aminotransferase class I and II; SPTR: Aspartate aminotransferase; manually curated; PFAM: Aminotransferase class I and II
YP_004058745.1	KEGG: nhl:Nhal_0815 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058746.1	KEGG: fra:Francci3_1423 hypothetical protein; SPTR: DivIVA
YP_004058747.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR003660: IPR003661: IPR003594: IPR004358: IPR 005467; KEGG: bts:Btus_1924 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SPTR: Integral membrane sensor signal transduction histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_004058748.1	COGs: COG0597 Lipoprotein signal peptidase; InterPro IPR001872; KEGG: ttj:TTHA0043 lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; SPTR: Lipoprotein signal peptidase; TIGRFAM: lipoprotein signal peptidase; PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase
YP_004058749.1	InterPro IPR001383; KEGG: msv:Mesil_3015 ribosomal protein L28; SPTR: Ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28
YP_004058750.1	InterPro IPR016047; KEGG: msv:Mesil_3014 peptidase M23; PFAM: Peptidase M23; SPTR: Peptidase M23; PFAM: Peptidase family M23
YP_004058751.1	COGs: COG0628 permease; InterPro IPR002549; KEGG: ttj:TTHA0309 hypothetical protein; PFAM: protein of unknown function UPF0118; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF20
YP_004058752.1	COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR020845: IPR000408: IPR000873; KEGG: msv:Mesil_0094 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme
YP_004058753.1	COGs: COG5502 conserved hypothetical protein; KEGG: ttj:TTHA1432 hypothetical protein; SPTR: Putative uncharacterized protein TTHA1432; PFAM: Uncharacterized conserved protein (DUF2267)
YP_004058754.1	COGs: COG0492 Thioredoxin reductase; InterPro IPR008255: IPR005982: IPR000103: IPR013027; KEGG: ttj:TTHA1920 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase
YP_004058755.1	COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595: IPR001808: IPR012318; KEGG: msv:Mesil_0258 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; SPTR: Transcriptional regulator, Crp/Fnr family; PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain
YP_004058756.1	InterPro IPR002740; KEGG: coc:Coch_1640 protein of unknown function DUF55; PFAM: protein of unknown function DUF55; SPTR: Conjugation signal peptidase TraF; PFAM: Protein of unknown function DUF55
YP_004058757.1	InterPro IPR003088: IPR009056; KEGG: pmx:PERMA_0306 nitrite reductase (cytochrome cd1) (cytochromeoxidase) (hydroxylamine reductase); PFAM: cytochrome c class I; PRIAM: Hydroxylamine reductase; SPTR: C d1 type nitrite reductase; PFAM: Cytochrome c; Cytochrome D1 heme domain
YP_004058758.1	COGs: COG2010 Cytochrome c mono- and diheme variants; InterPro IPR008168: IPR003088: IPR009056; KEGG: msv:Mesil_0473 cytochrome c class I; PFAM: cytochrome c class I; SPTR: Cytochrome c class I; PFAM: Cytochrome c
YP_004058759.1	KEGG: hth:HTH_0282 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058760.1	COGs: COG3256 Nitric oxide reductase large subunit; InterPro IPR000883; KEGG: hth:HTH_0283 nitric oxide reductase cytochrome b subunit; PRIAM: Nitric-oxide reductase; SPTR: Nitric oxide reductase subunit; PFAM: Cytochrome C and Quinol oxidase polypeptide I
YP_004058761.1	InterPro IPR009056; KEGG: hth:HTH_0284 nitric oxide reductase cytochrome c subunit; SPTR: Nitric oxide reductase subunit; PFAM: Cytochrome c
YP_004058762.1	COGs: COG1327 transcriptional regulator protein consists of a Zn-ribbon and ATP-cone domains; InterPro IPR003796: IPR005144; KEGG: ttj:TTHA0134 transcriptional regulator NrdR; PFAM: ATP-cone domain protein; SPTR: Transcriptional repressor nrdR; PFAM: ATP cone domain; TIGRFAM: transcriptional regulator NrdR
YP_004058763.1	COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002347: IPR002198; KEGG: msv:Mesil_0043 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase
YP_004058764.1	COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: mrb:Mrub_2670 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: Phospholipid/glycerol acyltransferase; PFAM: Acyltransferase
YP_004058765.1	COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: msv:Mesil_0814 LmbE family protein; PFAM: LmbE family protein; SPTR: LmbE family protein; PFAM: GlcNAc-PI de-N-acetylase
YP_004058766.1	COGs: COG2329 Uncharacterized protein involved in biosynthesis of extracellular polysaccharides; InterPro IPR007138; KEGG: msv:Mesil_2170 antibiotic biosynthesis monooxygenase; PFAM: Antibiotic biosynthesis monooxygenase; SPTR: Antibiotic biosynthesis monooxygenase; PFAM: Antibiotic biosynthesis monooxygenase
YP_004058767.1	KEGG: mrb:Mrub_0670 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058768.1	KEGG: chl:Chy400_1184 ABC-type branched-chain amino acid transport systems periplasmic component-like protein; SPTR: ABC-type branched-chain amino acid transport systems periplasmic component-like protein
YP_004058769.1	KEGG: scl:sce6218 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058770.1	KEGG: ttj:TTHA0330 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058771.1	COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR011611; KEGG: dra:DR_2553 carbohydrate kinase, putative; PFAM: PfkB domain protein; SPTR: Carbohydrate kinase, putative; PFAM: pfkB family carbohydrate kinase
YP_004058772.1	COGs: COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase; InterPro IPR003265; KEGG: tra:Trad_2699 HhH-GPD family protein; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein; SPTR: HhH-GPD family protein; PFAM: HhH-GPD superfamily base excision DNA repair protein
YP_004058773.1	COGs: COG1335 Amidase related to nicotinamidase; InterPro IPR000868; KEGG: msv:Mesil_1124 isochorismatase hydrolase; PFAM: isochorismatase hydrolase; SPTR: Isochorismatase hydrolase; PFAM: Isochorismatase family
YP_004058774.1	COGs: COG1268 conserved hypothetical protein; InterPro IPR003784; KEGG: ttj:TTHA0904 biotin biosynthesis protein BioY; PFAM: BioY protein; SPTR: BioY protein; PFAM: BioY family
YP_004058775.1	COGs: COG0340 Biotin-(acetyl-CoA carboxylase) ligase; InterPro IPR019885: IPR004408: IPR004143: IPR003142; KEGG: rmr:Rmar_0108 biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; biotin protein ligase domain protein; SPTR: Biotin/acetyl-CoA-carboxylase ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: HTH domain; Biotin protein ligase C terminal domain; Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region; BirA biotin operon repressor domain
YP_004058776.1	InterPro IPR019734: IPR001440: IPR013026; KEGG: msv:Mesil_2821 hypothetical protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Putative uncharacterized protein
YP_004058777.1	COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR003856; KEGG: tra:Trad_2951 capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein; SPTR: Capsular exopolysaccharide family; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family
YP_004058778.1	InterPro IPR007138; KEGG: tko:TK0741 hypothetical protein; PFAM: Antibiotic biosynthesis monooxygenase; SPTR: Putative uncharacterized protein; PFAM: Antibiotic biosynthesis monooxygenase
YP_004058779.1	COGs: COG2271 Sugar phosphate permease; InterPro IPR011701; KEGG: mrb:Mrub_2317 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily
YP_004058780.1	KEGG: hypothetical protein LOC719805; SPTR: Actin associated protein Wsp1, putative
YP_004058781.1	KEGG: msv:Mesil_2736 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058782.1	COGs: COG1209 dTDP-glucose pyrophosphorylase; InterPro IPR005908: IPR005835; KEGG: msv:Mesil_2794 glucose-1-phosphate thymidyltransferase; PFAM: Nucleotidyl transferase; SPTR: Glucose-1-phosphate thymidyltransferase; TIGRFAM: glucose-1-phosphate thymidyltransferase; PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylylransferase, long form
YP_004058783.1	COGs: COG1087 UDP-glucose 4-epimerase; InterPro IPR001509; KEGG: ttj:TTHA0591 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: UDP-glucose 4-epimerase; PFAM: NAD dependent epimerase/dehydratase family
YP_004058784.1	COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR017475: IPR017472: IPR003362; KEGG: cyn:Cyan7425_4214 undecaprenyl-phosphate galactose phosphotransferase, WbaP; PFAM: sugar transferase; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; SPTR: Undecaprenyl-phosphate galactose phosphotransferase, WbaP; TIGRFAM: Undecaprenyl-phosphate galactose phosphotransferase, WbaP; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; manually curated; PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Undecaprenyl-phosphate galactose phosphotransferase, WbaP
YP_004058785.1	InterPro IPR007016; KEGG: car:cauri_0411 hypothetical protein; PFAM: O-antigen polymerase; SPTR: Putative uncharacterized protein; PFAM: O-Antigen ligase
YP_004058786.1	COGs: COG1922 Teichoic acid biosynthesis protein; InterPro IPR004629; KEGG: rmr:Rmar_0895 glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; SPTR: Glycosyl transferase, WecB/TagA/CpsF family; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: Glycosyl transferase WecB/TagA/CpsF family; TIGRFAM: bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family
YP_004058787.1	KEGG: pop:POPTR_793150 hypothetical protein; SPTR: Predicted protein
YP_004058788.1	COGs: COG2089 Sialic acid synthase; InterProIPR000589: IPR020030: IPR013132: IPR013974: IPR 006190; KEGG: rca:Rcas_0774 N-acylneuraminate-9-phosphate synthase; PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; PRIAM: N-acetylneuraminate synthase; SPTR: N-acylneuraminate-9-phosphate synthase; TIGRFAM: pseudaminic acid synthase; PFAM: SAF domain; NeuB family; TIGRFAM: pseudaminic acid synthase
YP_004058789.1	COGs: COG1861 Spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase homolog; InterPro IPR003329; KEGG: tmt:Tmath_0716 acylneuraminate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; SPTR: Acylneuraminate cytidylyltransferase; manually curated; PFAM: Cytidylyltransferase
YP_004058790.1	COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR020026: IPR000653; KEGG: svi:Svir_01560 predicted PLP-dependent enzyme possibly involved in cell wall biogenesis; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; PRIAM: Glutamine--scyllo-inositol transaminase; SPTR: Predicted PLP-dependent enzyme possibly involved in cell wall biogenesis; TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase
YP_004058791.1	COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR020025: IPR003869; KEGG: svi:Svir_01570 predicted nucleoside-diphosphate sugar epimerase; PFAM: polysaccharide biosynthesis protein CapD; SPTR: Polysaccharide biosynthesis protein CapD; TIGRFAM: UDP-N-acetylglucosamine 4,6-dehydratase; PFAM: Polysaccharide biosynthesis protein; TIGRFAM: UDP-N-acetylglucosamine 4,6-dehydratase
YP_004058792.1	COGs: COG1482 Phosphomannose isomerase; InterPro IPR014628: IPR001250; KEGG: msv:Mesil_0920 mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type I; PRIAM: Mannose-6-phosphate isomerase; SPTR: Mannose-6-phosphate isomerase; PFAM: Phosphomannose isomerase type I; TIGRFAM: mannose-6-phosphate isomerase, class I
YP_004058793.1	COGs: COG2414 Aldehyde:ferredoxin oxidoreductase; InterPro IPR013983: IPR001203; KEGG: tth:TTC1834 tungsten-containing aldehyde ferredoxin oxidoreductase; PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; PRIAM: Aldehyde ferredoxin oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase; SPTR: Tungsten-containing aldehyde ferredoxin oxidoreductase; PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3
YP_004058794.1	COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; KEGG: rxy:Rxyl_2910 peptidase S9, prolyl oligopeptidase active site region; SPTR: Peptidase S9, prolyl oligopeptidase active site region; PFAM: Prolyl oligopeptidase family
YP_004058795.1	COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterProIPR006655: IPR006311: IPR006658: IPR006656: IPR 006657: IPR017909; KEGG: rpc:RPC_1751 molybdopterin guanine dinucleotide-containing S/N-oxide reductase; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; PRIAM: Trimethylamine-N-oxide reductase (cytochrome c); SPTR: Molybdopterin guanine dinucleotide-containing S/N-oxide reductase; TIGRFAM: molybdopterin guanine dinucleotide-containing S/N-oxide reductase; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; molybdopterin guanine dinucleotide-containing S/N-oxide reductases; Tat (twin-arginine translocation) pathway signal sequence
YP_004058796.1	KEGG: eic:NT01EI_2572 cytochrome c-type protein TorC; SPTR: Cytochrome c-type protein TorC; PFAM: Dihaem cytochrome c
YP_004058797.1	COGs: COG0223 Methionyl-tRNA formyltransferase; InterPro IPR005794: IPR002376: IPR005793; KEGG: msv:Mesil_0164 methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; SPTR: Methionyl-tRNA formyltransferase; TIGRFAM: methionyl-tRNA formyltransferase; PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase
YP_004058798.1	COGs: COG0242 N-formylmethionyl-tRNA deformylase; InterPro IPR000181; KEGG: msv:Mesil_0163 peptide deformylase; PFAM: formylmethionine deformylase; PRIAM: Peptide deformylase; SPTR: Peptide deformylase; TIGRFAM: peptide deformylase; PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase
YP_004058799.1	InterPro IPR012505; KEGG: msv:Mesil_0162 YbbR family protein; PFAM: YbbR family protein; SPTR: YbbR family protein
YP_004058800.1	COGs: COG1624 conserved hypothetical protein; InterPro IPR014046: IPR003390; KEGG: msv:Mesil_0161 protein of unknown function DUF147; PFAM: protein of unknown function DUF147; SPTR: Putative uncharacterized protein; PFAM: DisA bacterial checkpoint controller nucleotide-binding; TIGRFAM: conserved hypothetical protein TIGR00159
YP_004058801.1	COGs: COG1015 Phosphopentomutase; InterPro IPR019825: IPR010045: IPR006124; KEGG: msv:Mesil_0150 phosphopentomutase; PFAM: metalloenzyme domain protein; PRIAM: Phosphopentomutase; SPTR: Phosphopentomutase; TIGRFAM: phosphopentomutase; PFAM: Metalloenzyme superfamily; TIGRFAM: phosphopentomutase
YP_004058802.1	KEGG: msv:Mesil_3344 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058803.1	KEGG: msv:Mesil_3344 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058804.1	KEGG: chl:Chy400_1184 ABC-type branched-chain amino acid transport systems periplasmic component-like protein; SPTR: ABC-type branched-chain amino acid transport systems periplasmic component-like protein
YP_004058805.1	COGs: COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; InterPro IPR001126: IPR017963; KEGG: mrb:Mrub_3025 DNA-directed DNA polymerase; PFAM: UMUC domain protein DNA-repair protein; PRIAM: DNA-directed DNA polymerase; SPTR: DNA-directed DNA polymerase; PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; IMS family HHH motif
YP_004058806.1	COGs: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; InterProIPR000834: IPR000014: IPR003018: IPR003607: IPR 013767: IPR013655: IPR006674: IPR000700; KEGG: tth:TTC0629 HD-hydrolase domain-containing protein; PFAM: metal-dependent phosphohydrolase HD sub domain; PAS fold-3 domain protein; PAS fold domain protein; GAF domain protein; SMART: metal-dependent phosphohydrolase HD region; GAF domain protein; PAS domain containing protein; SPTR: HD-hydrolase domain; TIGRFAM: PAS sensor protein; PFAM: HD domain; PAS fold; TIGRFAM: PAS domain S-box
YP_004058807.1	COGs: COG2390 Transcriptional regulator contains sigma factor-related N-terminal domain; InterPro IPR007324; KEGG: tle:Tlet_1685 DeoR family transcriptional regulator; PFAM: sugar-binding domain-containing protein; SPTR: Transcriptional regulator, DeoR family; PFAM: Sigma-70, region 4; Putative sugar-binding domain
YP_004058808.1	COGs: COG1850 Ribulose 1 5-bisphosphate carboxylase large subunit; InterPro IPR000685; KEGG: tle:Tlet_1684 ribulose-bisphosphate carboxylase; PFAM: ribulose bisphosphate carboxylase large chain; SPTR: RubisCO-like protein; PFAM: Ribulose bisphosphate carboxylase large chain, catalytic domain
YP_004058809.1	COGs: COG3958 Transketolase C-terminal subunit; InterPro IPR005475: IPR005476; KEGG: tle:Tlet_1683 transketolase central region; PFAM: Transketolase central region; Transketolase domain-containing protein; SPTR: Transketolase central region; PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain
YP_004058810.1	COGs: COG3959 Transketolase N-terminal subunit; InterPro IPR005474; KEGG: tle:Tlet_1682 transketolase; PFAM: Transketolase domain-containing protein; SPTR: Transketolase domain protein; PFAM: Transketolase, thiamine diphosphate binding domain
YP_004058811.1	COGs: COG0182 translation initiation factor 2B subunit eIF-2B alpha/beta/delta family; InterPro IPR005251: IPR011559: IPR000649; KEGG: tle:Tlet_1681 eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related; PRIAM: S-methyl-5-thioribose-1-phosphate isomerase; SPTR: Methylthioribose-1-phosphate isomerase 2; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: Initiation factor 2 subunit family; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized proteins; S-methyl-5-thioribose-1-phosphate isomerase
YP_004058812.1	COGs: COG4857 kinase; InterPro IPR009212: IPR002575; KEGG: tle:Tlet_1680 methylthioribose kinase; PFAM: aminoglycoside phosphotransferase; PRIAM: S-methyl-5-thioribose kinase; SPTR: 5-methylthioribose kinase; TIGRFAM: 5-methylthioribose kinase; PFAM: Phosphotransferase enzyme family; TIGRFAM: 5-methylthioribose kinase
YP_004058813.1	COGs: COG1541 Coenzyme F390 synthetase; KEGG: ttj:TTHA0511 phenylaceate-CoA ligase/coenzyme F390 synthetase; SPTR: Phenylaceate-CoA ligase/coenzyme F390 synthetase; PFAM: AMP-binding enzyme
YP_004058814.1	COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: ttj:TTHA0585 branched-chain amino acid ABC transporter, permease protein; PFAM: inner-membrane translocator; SPTR: Branched-chain amino acid ABC transporter, permease protein; PFAM: Branched-chain amino acid transport system / permease component
YP_004058815.1	COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR020845: IPR000873; KEGG: mrb:Mrub_2375 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase and ligase; SPTR: AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme
YP_004058816.1	COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003593: IPR003439; KEGG: tth:TTC0218 branched-chain amino acid transport ATP-binding protein LivG; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Branched-chain amino acid transport ATP-binding protein livG; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter
YP_004058817.1	COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR017871: IPR003593: IPR003439; KEGG: msv:Mesil_2443 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter; PFAM: ABC transporter
YP_004058818.1	COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: ttj:TTHA0589 branched-chain amino acid ABC transporter permease protein; PFAM: inner-membrane translocator; SPTR: Branched-chain amino acid ABC transporter permease livH; PFAM: Branched-chain amino acid transport system / permease component
YP_004058819.1	COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR006311: IPR001828: IPR017909; KEGG: ttj:TTHA0590 branched-chain amino acid ABC transporter amino acid-binding protein; PFAM: Extracellular ligand-binding receptor; SPTR: Branched-chain amino acid ABC transporter amino acid-binding protein; PFAM: Receptor family ligand binding region
YP_004058820.1	COGs: COG0135 Phosphoribosylanthranilate isomerase; InterPro IPR001240; KEGG: mrb:Mrub_0815 phosphoribosylanthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); SPTR: N-(5'-phosphoribosyl)anthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase
YP_004058821.1	KEGG: msv:Mesil_1101 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058822.1	COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: msv:Mesil_1100 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; SPTR: Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal
YP_004058823.1	COGs: COG0642 Signal transduction histidine kinase; InterProIPR003660: IPR003661: IPR003594: IPR004358: IPR 005467; KEGG: msv:Mesil_1098 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SPTR: Integral membrane sensor signal transduction histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain
YP_004058824.1	COGs: COG3093 Plasmid maintenance system antidote protein; InterPro IPR013430: IPR001387; KEGG: dak:DaAHT2_2433 plasmid maintenance system antidote protein, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Similar to plasmid maintenance protein HigB; TIGRFAM: addiction module antidote protein, HigA family; PFAM: Helix-turn-helix; TIGRFAM: addiction module antidote protein, HigA family
YP_004058825.1	InterPro IPR017900: IPR017896; KEGG: msv:Mesil_0990 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S binding domain
YP_004058826.1	COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterProIPR010954: IPR006268: IPR020822: IPR006218: IPR 002701; KEGG: ttj:TTHA0388 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; PFAM: DAHP synthetase I/KDSA; Chorismate mutase, type II; SPTR: Phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; chorismate mutase; PFAM: Chorismate mutase type II; DAHP synthetase I family; TIGRFAM: chorismate mutase domain of gram positive AroA protein; phospho-2-dehydro-3-deoxyheptonate aldolase
YP_004058827.1	COGs: COG0805 Sec-independent protein secretion pathway component TatC; InterPro IPR019822: IPR002033; KEGG: ttj:TTHA0387 sec-independent protein translocase protein TatC; PFAM: Sec-independent periplasmic protein translocase; SPTR: Sec-independent protein translocase protein TatC; TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent protein translocase protein (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC
YP_004058828.1	COGs: COG1826 Sec-independent protein secretion pathway components; InterPro IPR006312: IPR003369; KEGG: msv:Mesil_1267 twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; SPTR: Twin-arginine translocation protein, TatA/E family subunit; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family
YP_004058829.1	COGs: COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains); InterPro IPR018357: IPR005882: IPR001228: IPR001451; KEGG: mrb:Mrub_1764 UDP-N-acetylglucosamine pyrophosphorylase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein; PRIAM: Glucosamine-1-phosphate N-acetyltransferase; SPTR: Bifunctional protein glmU; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Nucleotidyl transferase; TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase
YP_004058830.1	COGs: COG0682 Prolipoprotein diacylglyceryltransferase; InterPro IPR001640; KEGG: msv:Mesil_1265 prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase; SPTR: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase
YP_004058831.1	InterPro IPR008554; KEGG: ttj:TTHA0383 thioredoxin; PFAM: glutaredoxin 2; SPTR: Glutaredoxin 2
YP_004058832.1	COGs: COG2839 conserved hypothetical protein; InterPro IPR007403; KEGG: msv:Mesil_1263 protein of unknown function DUF456; PFAM: protein of unknown function DUF456; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF456)
YP_004058833.1	InterPro IPR005135; KEGG: mjl:Mjls_0808 FHA domain-containing protein; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: FHA domain containing protein; PFAM: Endonuclease/Exonuclease/phosphatase family
YP_004058834.1	KEGG: dvi:Dvir_GJ21213 GJ21213 gene product from transcript GJ21213-RA; SPTR: GJ21213
YP_004058835.1	InterPro IPR000620; KEGG: ddr:Deide_03150 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: Putative uncharacterized protein; PFAM: EamA-like transporter family
YP_004058836.1	COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; KEGG: sti:Sthe_1357 peptidase S9 prolyl oligopeptidase active site domain protein; SPTR: Peptidase S9 prolyl oligopeptidase active site domain protein; PFAM: Prolyl oligopeptidase family
YP_004058837.1	COGs: COG3158 K+ transporter; InterPro IPR003855; KEGG: gsu:GSU2350 potassium uptake protein, Kup system; PFAM: K potassium transporter; SPTR: Kup system potassium uptake protein; PFAM: K+ potassium transporter; TIGRFAM: potassium uptake protein
YP_004058838.1	COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family; InterPro IPR014001: IPR001650: IPR000330: IPR014021; KEGG: ava:Ava_2189 type III restriction enzyme, res subunit; PFAM: helicase domain protein; SNF2-related protein; SMART: helicase domain protein; DEAD-like helicase; SPTR: Similar to tr|Q3MB27|Q3MB27_ANAVT Type III restriction enzyme; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain
YP_004058839.1	InterPro IPR012933; KEGG: npu:Npun_R5487 hypothetical protein; PFAM: YcfA family protein; SPTR: Putative uncharacterized protein; manually curated; PFAM: YcfA-like protein
YP_004058840.1	COGs: COG1598 conserved hypothetical protein; InterPro IPR005357; KEGG: npu:Npun_R5486 hypothetical protein; PFAM: Uncharacterised protein family UPF0150; SPTR: Putative uncharacterized protein; PFAM: HicB family; Uncharacterised protein family (UPF0150)
YP_004058841.1	KEGG: tgr:Tgr7_2943 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF88
YP_004058842.1	COGs: COG1743 Adenine-specific DNA methylase containing a Zn-ribbon; InterPro IPR009537: IPR012327; KEGG: cpb:Cphamn1_2496 protein of unknown function DUF1156; PFAM: protein of unknown function DUF1156; D12 class N6 adenine-specific DNA methyltransferase; SPTR: Putative uncharacterized protein; PFAM: D12 class N6 adenine-specific DNA methyltransferase; Protein of unknown function (DUF1156)
YP_004058843.1	COGs: COG1483 ATPase (AAA+ superfamily); KEGG: chl:Chy400_2921 ATPase (AAA+ superfamily)-like protein; SPTR: ATPase (AAA+ superfamily)-like protein; PFAM: Protein of unknown function (DUF499)
YP_004058844.1	KEGG: cyn:Cyan7425_2607 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058845.1	KEGG: sfu:Sfum_0256 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058846.1	COGs: COG0515 Serine/threonine protein kinase; InterProIPR017441: IPR008266: IPR020635: IPR002290: IPR 018391: IPR017442: IPR002372: IPR000719; KEGG: msv:Mesil_0128 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; Pyrrolo-quinoline quinone repeat-containing protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; Pyrrolo-quinoline quinone beta-propeller repeat; SPTR: Serine/threonine protein kinase; manually curated; PFAM: Protein kinase domain; PQQ enzyme repeat
YP_004058847.1	KEGG: msv:Mesil_0396 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058848.1	COGs: COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase; InterPro IPR005750: IPR001986; KEGG: tth:TTC1854 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); PRIAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; SPTR: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase
YP_004058849.1	COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR003675: IPR013216; KEGG: kol:Kole_1809 abortive infection protein; PFAM: Methyltransferase type 11; Abortive infection protein; SPTR: Abortive infection protein; PFAM: CAAX amino terminal protease family; Methyltransferase domain
YP_004058850.1	KEGG: cpb:Cphamn1_1035 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Transposase IS200 like
YP_004058851.1	COGs: COG2367 Beta-lactamase class A; KEGG: tra:Trad_1173 beta-lactamase related protein; SPTR: Beta lactamase-related protein, putative
YP_004058852.1	InterPro IPR012867; KEGG: chl:Chy400_3527 protein of unknown function DUF1648; PFAM: protein of unknown function DUF1648; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1648)
YP_004058853.1	InterPro IPR001845; KEGG: dge:Dgeo_1314 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family
YP_004058854.1	InterPro IPR006626; KEGG: hau:Haur_1515 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058855.1	KEGG: tcx:Tcr_1058 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058856.1	KEGG: msv:Mesil_3041 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058857.1	COGs: COG0221 Inorganic pyrophosphatase; InterPro IPR008162; KEGG: ttj:TTHA1965 inorganic pyrophosphatase; PFAM: Inorganic pyrophosphatase; PRIAM: Inorganic diphosphatase; SPTR: Inorganic pyrophosphatase; PFAM: Inorganic pyrophosphatase
YP_004058858.1	COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: mrb:Mrub_0011 polyprenyl synthetase; PFAM: Polyprenyl synthetase; SPTR: Polyprenyl synthetase; PFAM: Polyprenyl synthetase
YP_004058859.1	COGs: COG0672 High-affinity Fe2+/Pb2+ permease; InterPro IPR004923; KEGG: dge:Dgeo_2443 iron permease FTR1; PFAM: iron permease FTR1; SPTR: Iron permease FTR1; PFAM: Iron permease FTR1 family; TIGRFAM: FTR1 family protein
YP_004058860.1	KEGG: msv:Mesil_3187 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058861.1	KEGG: msv:Mesil_3188 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058862.1	KEGG: msv:Mesil_3190 hypothetical protein; SPTR: Putative uncharacterized protein
YP_004058863.1	COGs: COG1555 DNA uptake protein and related DNA-binding protein; InterPro IPR003583: IPR019554: IPR000445; KEGG: tra:Trad_0549 soluble ligand binding domain protein; PFAM: Soluble ligand binding domain; helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding class 1; SPTR: Soluble ligand binding domain protein; PFAM: SLBB domain; Helix-hairpin-helix motif; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; comEA protein
YP_004058864.1	COGs: COG2333 hydrolase (metallo-beta-lactamase superfamily); InterPro IPR004797: IPR004477; KEGG: msv:Mesil_3192 DNA internalization-related competence protein ComEC/Rec2; PFAM: ComEC/Rec2-related protein; SPTR: DNA internalization-related competence protein ComEC/Rec2; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: Competence protein; Metallo-beta-lactamase superfamily; TIGRFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2
YP_004058865.1	COGs: COG1475 transcriptional regulator protein; InterPro IPR004437: IPR003115; KEGG: msv:Mesil_3193 ParB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; SPTR: ParB-like partition protein; TIGRFAM: parB-like partition protein; PFAM: ParB-like nuclease domain; KorB domain; TIGRFAM: ParB-like partition proteins
YP_004058866.1	COGs: COG1192 ATPase involved in chromosome partitioning; KEGG: mrb:Mrub_3050 cobyrinic acid ac-diamide synthase; SPTR: Cobyrinic acid ac-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain
YP_004058867.1	COGs: COG0357 S-adenosylmethionine-dependent methyltransferase involved in cell division; InterPro IPR003682; KEGG: tra:Trad_2993 glucose inhibited division protein; PFAM: glucose inhibited division protein; SPTR: Glucose inhibited division protein; TIGRFAM: methyltransferase GidB; PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA methyltransferase GidB
YP_004058868.1	COGs: COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division; InterPro IPR020595: IPR004416: IPR002218; KEGG: tth:TTC1607 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; PFAM: glucose-inhibited division protein A; SPTR: tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG; TIGRFAM: glucose inhibited division protein A; PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A