-- dump date 20140619_144752 -- class Genbank::CDS -- table cds_note -- id note YP_001752058.1 KEGG: gox:GOX2551 hypothetical protein YP_001752059.1 PFAM: ROSMUCR transcriptional regulator; KEGG: ccr:CC_0933 transcriptional regulator YP_001752061.1 KEGG: mex:Mext_3810 hypothetical protein YP_001752062.1 KEGG: mex:Mext_4523 hypothetical protein YP_001752063.1 KEGG: rle:pRL70026 putative transposase YP_001752067.1 PFAM: IstB domain protein ATP-binding protein; KEGG: smd:Smed_5625 IstB domain protein ATP-binding protein YP_001752068.1 PFAM: transposase IS3/IS911 family protein; KEGG: azc:AZC_3852 transposase YP_001752069.1 PFAM: Integrase catalytic region; KEGG: mgm:Mmc1_1989 integrase, catalytic region YP_001752070.1 KEGG: gdi:GDI1584 hypothetical protein YP_001752071.1 KEGG: gdi:GDI1585 hypothetical protein YP_001752072.1 KEGG: bbt:BBta_6567 hypothetical protein YP_001752073.1 KEGG: mgr:MGG_08078 hypothetical protein YP_001752074.1 KEGG: mex:Mext_3525 hypothetical protein YP_001752075.1 KEGG: nmu:Nmul_B2810 ParA protein, putative YP_001752076.1 PFAM: Hemolysin-type calcium-binding region; Haemolysin-type calcium binding domain protein; KEGG: ava:Ava_3265 putative Ig YP_001752077.1 KEGG: smd:Smed_0884 type I secretion system ATPase; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase YP_001752078.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: smd:Smed_0883 type I secretion membrane fusion protein, HlyD family YP_001752079.1 KEGG: jan:Jann_3533 hypothetical protein YP_001752080.1 PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: kra:Krad_4707 resolvase domain YP_001752692.1 KEGG: ret:RHE_CH00044 hypothetical protein YP_001752694.1 KEGG: bxe:Bxe_A0066 hypothetical protein YP_001752695.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: nha:Nham_1048 cobyrinic acid a,c-diamide synthase YP_001752696.1 KEGG: vei:Veis_3357 hypothetical protein YP_001752697.1 KEGG: sbm:Shew185_2997 hypothetical protein YP_001752702.1 KEGG: gtn:GTNG_1622 hypothetical protein YP_001752703.1 KEGG: mex:Mext_3525 hypothetical protein YP_001752708.1 PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: rsh:Rsph17029_2027 resolvase, N-terminal domain YP_001752709.1 KEGG: dno:DNO_0179 hypothetical protein VrlM YP_001752710.1 KEGG: mmr:Mmar10_1172 hypothetical protein YP_001752711.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase YP_001752712.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself. YP_001752713.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_001752714.1 KEGG: mex:Mext_3243 hypothetical protein YP_001752715.1 PFAM: EAL domain protein; KEGG: mex:Mext_3242 EAL domain protein YP_001752716.1 PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: mex:Mext_3241 3-hydroxyacyl-CoA dehydrogenase NAD-binding YP_001752717.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: azc:AZC_1928 transcriptional regulator YP_001752718.1 PFAM: extracellular solute-binding protein family 3; KEGG: azc:AZC_1927 putative amino acid ABC transporter periplasmic amino acid-binding protein YP_001752719.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: azc:AZC_1923 threonine aldolase YP_001752720.1 PFAM: zinc finger SWIM domain protein; Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: mex:Mext_0325 exonuclease RNase T and DNA polymerase III YP_001752721.1 KEGG: mex:Mext_4642 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: NAD-dependent DNA ligase YP_001752722.1 PFAM: major facilitator superfamily MFS_1; KEGG: scl:sce0894 permease of the major facilitator superfamily YP_001752723.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: mes:Meso_2583 4'-phosphopantetheinyl transferase YP_001752725.1 KEGG: mtf:TBFG_11549 hypothetical protein YP_001752726.1 KEGG: mex:Mext_0507 hypothetical protein YP_001752727.1 PFAM: formyl transferase domain protein; KEGG: hhe:HH0089 hypothetical protein YP_001752728.1 KEGG: mex:Mext_3073 hypothetical protein YP_001752729.1 KEGG: mex:Mext_3071 queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylase, various specificities; queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase YP_001752730.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step YP_001752731.1 KEGG: mex:Mext_3067 hypothetical protein YP_001752732.1 KEGG: mex:Mext_3066 hypothetical protein YP_001752733.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: mex:Mext_3065 cation diffusion facilitator family transporter YP_001752734.1 PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_3664 acyl-CoA dehydrogenase type 2 domain YP_001752735.1 PFAM: Luciferase-like monooxygenase; KEGG: mex:Mext_3663 alkanesulfonate monooxygenase YP_001752736.1 PFAM: Surfeit locus 1 family protein; KEGG: mex:Mext_3256 surfeit locus 1 family protein YP_001752737.1 PFAM: protein of unknown function DUF983; KEGG: mex:Mext_3257 protein of unknown function DUF983 YP_001752738.1 PFAM: cytochrome c oxidase subunit III; KEGG: mex:Mext_3258 cytochrome c oxidase subunit III YP_001752739.1 PFAM: cytochrome c oxidase assembly protein CtaG/Cox11; KEGG: mex:Mext_3259 cytochrome c oxidase assembly protein CtaG/Cox11 YP_001752740.1 KEGG: mex:Mext_3260 conserved protein CoxF YP_001752741.1 converts protoheme IX and farnesyl diphosphate to heme O YP_001752742.1 KEGG: mex:Mext_3262 cytochrome c oxidase, subunit I; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I YP_001752743.1 KEGG: mex:Mext_3263 cytochrome c oxidase, subunit II; TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome C oxidase subunit II transmembrane region YP_001752744.1 TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: mex:Mext_3264 formate dehydrogenase family accessory protein FdhD YP_001752745.1 KEGG: mex:Mext_3265 putative exported protein of unknown function YP_001752746.1 PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: mex:Mext_3266 glutamate synthase (ferredoxin) YP_001752747.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate YP_001752748.1 PFAM: lipolytic protein G-D-S-L family; protein of unknown function DUF459; KEGG: mex:Mext_3271 protein of unknown function DUF459 YP_001752749.1 TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: mex:Mext_3272 lytic murein transglycosylase YP_001752750.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_3273 UDP-glucose 4-epimerase YP_001752751.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: mex:Mext_3274 UTP-glucose-1-phosphate uridylyltransferase YP_001752752.1 PFAM: N-formylglutamate amidohydrolase; KEGG: mex:Mext_3275 N-formylglutamate amidohydrolase YP_001752753.1 PFAM: response regulator receiver; KEGG: mex:Mext_3276 response regulator receiver YP_001752754.1 TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; KEGG: mex:Mext_3277 glutaredoxin 3 YP_001752755.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mex:Mext_3278 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001752756.1 PFAM: protein of unknown function DUF1178; KEGG: mex:Mext_3279 protein of unknown function DUF1178 YP_001752757.1 PFAM: Disulphide bond formation protein DsbB; KEGG: mex:Mext_0726 disulphide bond formation protein DsbB YP_001752758.1 KEGG: mex:Mext_0725 DedA family YP_001752759.1 KEGG: bmu:Bmul_5843 FAD dependent oxidoreductase YP_001752760.1 PFAM: histone deacetylase superfamily; KEGG: mex:Mext_0713 histone deacetylase superfamily YP_001752762.1 KEGG: bja:bsr4462 hypothetical protein YP_001752763.1 PFAM: KDPG and KHG aldolase; KEGG: gdi:GDI2172 hypothetical protein YP_001752764.1 PFAM: 2-keto-3-deoxy-galactonokinase; KEGG: sal:Sala_0743 2-dehydro-3-deoxygalactonokinase YP_001752765.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nha:Nham_1672 ABC transporter related YP_001752766.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nha:Nham_1673 ABC transporter related YP_001752767.1 KEGG: xau:Xaut_5024 extracellular ligand-binding receptor YP_001752768.1 PFAM: inner-membrane translocator; KEGG: mag:amb2326 branched-chain amino acid ABC-type transport system, permease components YP_001752769.1 PFAM: inner-membrane translocator; KEGG: azc:AZC_4515 putative ABC transporter, permease protein precursor YP_001752770.1 KEGG: mex:Mext_3987 hypothetical protein YP_001752771.1 TIGRFAM: DNA mismatch repair protein MutL; PFAM: ATP-binding region ATPase domain protein; DNA mismatch repair protein domain protein; MutL dimerisation; KEGG: mex:Mext_4265 DNA mismatch repair protein MutL YP_001752772.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bpt:Bpet0046 2-deoxy-D-gluconate 3-dehydrogenase YP_001752773.1 PFAM: AMP-dependent synthetase and ligase; KEGG: pae:PA4198 acyl-CoA synthetase YP_001752774.1 KEGG: nwi:Nwi_1013 hypothetical protein YP_001752775.1 PFAM: alpha/beta hydrolase fold; KEGG: azo:azo1513 probable hydrolase YP_001752776.1 PFAM: helix-turn-helix domain protein; KEGG: mex:Mext_1041 helix-turn-helix domain protein YP_001752777.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: mex:Mext_4261 cupin 2 conserved barrel domain protein YP_001752778.1 TIGRFAM: methyltransferase; PFAM: Protein of unknown function methylase putative; KEGG: mex:Mext_3860 methyltransferase YP_001752779.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: mex:Mext_3861 RNA-binding S4 domain protein YP_001752780.1 PFAM: protein of unknown function DUF1328; KEGG: mex:Mext_3862 protein of unknown function DUF1328 YP_001752781.1 PFAM: CsbD family protein; KEGG: mex:Mext_0366 CsbD family protein YP_001752782.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: mex:Mext_3870 CMP/dCMP deaminase zinc-binding YP_001752783.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_3869 short-chain dehydrogenase/reductase SDR YP_001752784.1 KEGG: mex:Mext_3606 conserved hypothetical protein YP_001752785.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_4474 ROSMUCR transcriptional regulator YP_001752786.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_3403 major facilitator superfamily MFS_1 YP_001752787.1 PFAM: NAD-glutamate dehydrogenase; KEGG: bja:blr7995 hypothetical protein YP_001752788.1 PFAM: regulatory protein MarR; KEGG: pau:PA14_47580 putative transcriptional regulator, MarR family YP_001752789.1 PFAM: major facilitator superfamily MFS_1; KEGG: rru:Rru_A3517 major facilitator superfamily MFS_1 YP_001752790.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_3420 major facilitator superfamily MFS_1 YP_001752791.1 PFAM: DoxX family protein; KEGG: mex:Mext_3428 DoxX family protein YP_001752792.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_3429 major facilitator superfamily MFS_1 YP_001752793.1 KEGG: mex:Mext_3430 conserved hypothetical protein; putative exported protein YP_001752794.1 KEGG: mex:Mext_2939 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase YP_001752795.1 KEGG: mex:Mext_2936 2-dehydropantoate 2-reductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_001752796.1 KEGG: mex:Mext_2935 hypothetical protein YP_001752797.1 PFAM: Fmu (Sun) domain protein; KEGG: mex:Mext_2934 Fmu (Sun) domain protein YP_001752798.1 KEGG: mex:Mext_2933 hypothetical protein YP_001752799.1 KEGG: mex:Mext_2339 hypothetical protein YP_001752800.1 KEGG: mex:Mext_2338 hypothetical protein YP_001752801.1 KEGG: mex:Mext_2336 WD-40 repeat protein YP_001752802.1 PFAM: protein of unknown function DUF1275; KEGG: mex:Mext_2335 protein of unknown function DUF1275 YP_001752803.1 PFAM: response regulator receiver; KEGG: mex:Mext_2334 response regulator receiver YP_001752804.1 KEGG: mex:Mext_2333 PRC-barrel YP_001752805.1 KEGG: mex:Mext_2283 hypothetical protein YP_001752806.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_2284 NUDIX hydrolase YP_001752807.1 PFAM: protein of unknown function DUF610 YibQ; KEGG: mex:Mext_2286 protein of unknown function DUF610 YibQ YP_001752808.1 KEGG: mex:Mext_2287 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41 YP_001752809.1 PFAM: Peptidase M23; KEGG: mex:Mext_2288 peptidase M23B YP_001752810.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA YP_001752811.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: mex:Mext_2870 iojap-like protein YP_001752812.1 TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; KEGG: mex:Mext_2869 nicotinate (nicotinamide) nucleotide adenylyltransferase YP_001752813.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway YP_001752814.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis YP_001752815.1 TIGRFAM: small GTP-binding protein; GTP-binding protein Obg/CgtA; PFAM: GTP-binding protein HSR1-related; GTP1/OBG sub domain protein; KEGG: mex:Mext_4410 GTP-binding protein Obg/CgtA YP_001752816.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_4412 GCN5-related N-acetyltransferase YP_001752817.1 involved in the peptidyltransferase reaction during translation YP_001752818.1 PFAM: ribosomal protein L21; KEGG: mex:Mext_4414 ribosomal protein L21 YP_001752820.1 PFAM: YceI family protein; KEGG: mex:Mext_0963 YceI family protein YP_001752821.1 plays an essential role in ATP-dependent branch migration of the Holliday junction YP_001752822.1 KEGG: mex:Mext_1764 hypothetical protein YP_001752823.1 TIGRFAM: bacterioferritin; PFAM: Rubrerythrin; Ferritin Dps family protein; KEGG: mex:Mext_1763 bacterioferritin YP_001752824.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis YP_001752825.1 catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate YP_001752826.1 PFAM: 2OG-Fe(II) oxygenase; KEGG: xau:Xaut_0346 2OG-Fe(II) oxygenase YP_001752827.1 PFAM: protein of unknown function DUF817; KEGG: mex:Mext_4796 protein of unknown function DUF817 YP_001752828.1 KEGG: mex:Mext_1969 hypothetical protein YP_001752829.1 PFAM: gamma-glutamyltranspeptidase; KEGG: mpt:Mpe_A3055 gamma-glutamyltransferase YP_001752830.1 KEGG: mex:Mext_2704 hypothetical protein YP_001752831.1 KEGG: mex:Mext_2703 hypothetical protein YP_001752832.1 TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; KEGG: mex:Mext_2702 aspartate-semialdehyde dehydrogenase YP_001752833.1 KEGG: azc:AZC_0441 hypothetical protein YP_001752834.1 PFAM: protein of unknown function DUF1244; KEGG: mex:Mext_2749 protein of unknown function DUF1244 YP_001752835.1 PFAM: N-formylglutamate amidohydrolase; KEGG: mex:Mext_2748 N-formylglutamate amidohydrolase YP_001752836.1 PFAM: MOFRL domain protein; KEGG: mex:Mext_2747 hydroxypyruvate reductase YP_001752837.1 PFAM: protein of unknown function DUF1036; KEGG: mex:Mext_2746 protein of unknown function DUF1036 YP_001752838.1 KEGG: mex:Mext_2744 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta YP_001752839.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_2743 alpha/beta hydrolase fold YP_001752840.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mex:Mext_2742 tetratricopeptide TPR_2 repeat protein YP_001752841.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif YP_001752842.1 PFAM: PAS fold-3 domain protein; KEGG: aba:Acid345_2554 PAS/PAC sensor hybrid histidine kinase YP_001752843.1 PFAM: PEBP family protein; KEGG: mex:Mext_0960 PEBP family protein YP_001752844.1 KEGG: mex:Mext_0959 ubiquinone biosynthesis O-methyltransferase; TIGRFAM: ubiquinone biosynthesis O-methyltransferase; PFAM: Methyltransferase type 11; Methyltransferase type 12 YP_001752845.1 KEGG: mex:Mext_0958 aspartate kinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein YP_001752846.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; GAF domain protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: mex:Mext_0957 phosphoenolpyruvate-protein phosphotransferase YP_001752847.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2 YP_001752848.1 TIGRFAM: modification methylase, HemK family; protein-(glutamine-N5) methyltransferase, release factor-specific; PFAM: methyltransferase small; KEGG: mex:Mext_0954 protein-(glutamine-N5) methyltransferase, release factor-specific YP_001752849.1 KEGG: mex:Mext_0953 hypothetical protein YP_001752850.1 KEGG: mex:Mext_2280 hypothetical protein YP_001752851.1 PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: mex:Mext_3432 ribosomal RNA methyltransferase RrmJ/FtsJ YP_001752852.1 PFAM: Ppx/GppA phosphatase; KEGG: mex:Mext_3433 Ppx/GppA phosphatase YP_001752853.1 PFAM: response regulator receiver; KEGG: mex:Mext_2973 response regulator receiver YP_001752854.1 PFAM: Cold-shock protein DNA-binding; Ribonuclease B OB region domain; SMART: Cold shock protein; KEGG: mex:Mext_2974 cold-shock protein DNA-binding YP_001752855.1 KEGG: mex:Mext_2975 hypothetical protein YP_001752856.1 KEGG: mex:Mext_4120 putative iron uptake protein YP_001752857.1 PFAM: PepSY-associated TM helix domain protein; KEGG: mex:Mext_4119 PepSY-associated TM helix domain protein YP_001752858.1 KEGG: mex:Mext_4118 putative iron uptake protein YP_001752859.1 PFAM: Aldehyde Dehydrogenase; KEGG: mex:Mext_3423 aldehyde dehydrogenase YP_001752861.1 PFAM: protein of unknown function DUF779; KEGG: mex:Mext_3221 protein of unknown function DUF779 YP_001752862.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: sil:SPO0760 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein YP_001752863.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: mex:Mext_4554 cupin 2 conserved barrel domain protein YP_001752864.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: mex:Mext_2371 Sel1 domain protein repeat-containing protein YP_001752865.1 PFAM: thiamine monophosphate synthase; KEGG: mex:Mext_2370 thiamine monophosphate synthase YP_001752866.1 class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis YP_001752868.1 PFAM: phosphoglycerate kinase; KEGG: mex:Mext_2368 phosphoglycerate kinase YP_001752869.1 KEGG: mex:Mext_2367 hypothetical protein YP_001752870.1 KEGG: mex:Mext_2366 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase YP_001752871.1 KEGG: mex:Mext_2365 hypothetical protein YP_001752872.1 PFAM: protein of unknown function DUF710; KEGG: mex:Mext_2364 protein of unknown function DUF710 YP_001752873.1 PFAM: helix-turn-helix HxlR type; KEGG: mex:Mext_4023 helix-turn-helix HxlR type YP_001752874.1 PFAM: 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; KEGG: mex:Mext_4022 NmrA family protein YP_001752875.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mex:Mext_0022 GntR domain protein YP_001752876.1 TIGRFAM: malonate decarboxylase, alpha subunit; KEGG: mex:Mext_0024 malonate decarboxylase, alpha subunit YP_001752877.1 acyl carrier protein of malonate decarboxylase YP_001752878.1 The beta subunit catalyzes the decarboxylation of the malonyl moiety on coenzyme A YP_001752879.1 TIGRFAM: malonate decarboxylase, gamma subunit; PFAM: malonate decarboxylase gamma subunit; KEGG: mex:Mext_0027 malonate decarboxylase, gamma subunit YP_001752880.1 KEGG: mex:Mext_0028 hypothetical protein YP_001752881.1 KEGG: mex:Mext_0030 acyl transferase domain protein YP_001752882.1 TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; KEGG: azc:AZC_0054 GDP-mannose 4,6-dehydratase YP_001752883.1 PFAM: Aldehyde Dehydrogenase; KEGG: rle:pRL110175 putative aldehyde dehydrogenase YP_001752884.1 KEGG: atc:AGR_L_3586 hypothetical protein YP_001752885.1 PFAM: polysaccharide biosynthesis protein; KEGG: gvi:gll3709 polysaccharide transporter, PST family YP_001752886.1 PFAM: glycosyl transferase group 1; KEGG: atc:AGR_L_2563 hypothetical protein YP_001752887.1 PFAM: glycosyl transferase group 1; KEGG: atu:Atu3558 glycosyltransferase YP_001752888.1 PFAM: glycosyl transferase group 1; KEGG: atc:AGR_L_2543 hypothetical protein YP_001752889.1 PFAM: glycosyl transferase group 1; KEGG: rpe:RPE_0808 glycosyl transferase, group 1 YP_001752890.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: rpe:RPE_0807 lipopolysaccharide biosynthesis YP_001752891.1 PFAM: glycosyl transferase group 1; KEGG: rpe:RPE_0806 glycosyl transferase, group 1 YP_001752892.1 PFAM: acyltransferase 3; KEGG: atc:AGR_L_3583 exopolysaccharide production protein ExoZ YP_001752893.1 PFAM: phosphopantetheine-binding; KEGG: oan:Oant_1477 acyl carrier protein YP_001752894.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rle:pRL100145 putative acyl-CoA dehydrogenase YP_001752895.1 KEGG: oan:Oant_1475 hypothetical protein YP_001752896.1 PFAM: Domain of unknown function DUF1839; KEGG: rle:RL4594 hypothetical protein YP_001752897.1 KEGG: rle:RL4593 putative beta-mannosidase YP_001752898.1 KEGG: bxe:Bxe_A2038 putative esterase/lipase/thioesterase YP_001752899.1 KEGG: atc:AGR_L_2559 hypothetical protein YP_001752900.1 KEGG: bmn:BMA10247_A0211 carboxylesterase family protein YP_001752901.1 TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: mex:Mext_3833 cytochrome d ubiquinol oxidase, subunit II YP_001752902.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: mex:Mext_3834 cytochrome bd ubiquinol oxidase subunit I YP_001752903.1 PFAM: UspA domain protein; KEGG: mex:Mext_1355 UspA domain protein YP_001752904.1 KEGG: psp:PSPPH_2333 sugar ABC transporter, periplasmic sugar-binding protein YP_001752905.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bra:BRADO6566 putative methyl-accepting chemotaxis protein YP_001752906.1 KEGG: mex:Mext_2764 HWE histidine kinase YP_001752907.1 KEGG: azc:AZC_3153 methyl-accepting chemotaxis receptor; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001752908.1 KEGG: fra:Francci3_1910 urate oxidase; TIGRFAM: urate oxidase; PFAM: Uricase YP_001752909.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: mex:Mext_1729 molybdopterin dehydrogenase FAD-binding YP_001752910.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; ferredoxin; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mex:Mext_1728 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_001752911.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: mex:Mext_3669 xanthine/uracil/vitamin C permease YP_001752912.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: rpd:RPD_0667 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YP_001752913.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_0237 response regulator receiver YP_001752914.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Osmosensitive K channel His kinase sensor; UspA domain protein; KEGG: mex:Mext_0236 osmosensitive K channel His kinase sensor YP_001752915.1 one of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; the C subunit may be involved in assembly of the KDP complex YP_001752916.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; K+-transporting ATPase, B subunit; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mex:Mext_0234 K+-transporting ATPase, B subunit YP_001752918.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions YP_001752922.1 KEGG: sat:SYN_01077 sensor proteinLuxQ; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; GAF domain protein YP_001752923.1 PFAM: response regulator receiver; KEGG: sus:Acid_4296 response regulator receiver protein YP_001752924.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; response regulator receiver; KEGG: sme:SMb20358 putative regulatory protein YP_001752925.1 PFAM: protein of unknown function DUF1203; KEGG: rde:RD1_2493 hypothetical protein YP_001752926.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; KEGG: bja:blr0364 hypothetical protein YP_001752927.1 KEGG: bja:bll7999 hypothetical protein YP_001752928.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: bja:blr7998 putative ferredoxin-NAD reductase component YP_001752929.1 KEGG: bja:blr7997 hypothetical protein YP_001752930.1 PFAM: porin; KEGG: mex:Mext_3186 porin YP_001752932.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: pfo:Pfl_3520 periplasmic sensor signal transduction histidine kinase YP_001752933.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bte:BTH_I0274 DNA-binding response regulator YP_001752934.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_3855 efflux transporter, RND family, MFP subunit YP_001752935.1 PFAM: acriflavin resistance protein; KEGG: mex:Mext_3856 acriflavin resistance protein YP_001752936.1 KEGG: mex:Mext_2828 hypothetical protein YP_001752938.1 KEGG: bbt:BBta_5461 hypothetical protein YP_001752939.1 PFAM: Amidase; KEGG: bja:bll4303 putative amidase YP_001752940.1 PFAM: major facilitator superfamily MFS_1; KEGG: azc:AZC_2021 major facilitator superfamily protein YP_001752941.1 catalyzes the formation of pyruvate from serine YP_001752942.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aav:Aave_2424 transcriptional regulator, LysR family YP_001752943.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bbr:BB1607 putative LysR-family transcriptional regulator YP_001752944.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; Male sterility domain; KEGG: mlo:mlr0239 hypothetical protein YP_001752945.1 PFAM: glycosyl transferase group 1; KEGG: gox:GOX0595 putative glycosyltransferase YP_001752946.1 KEGG: gox:GOX0592 hypothetical protein YP_001752947.1 KEGG: neu:NE0484 hypothetical protein YP_001752948.1 PFAM: glycosyl transferase group 1; KEGG: rrs:RoseRS_0424 glycosyl transferase, group 1 YP_001752949.1 KEGG: mul:MUL_3428 hypothetical protein YP_001752950.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: pen:PSEEN2698 hypothetical protein YP_001752951.1 KEGG: bja:blr0921 hypothetical protein YP_001752952.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: azc:AZC_0074 putative transcriptional regulator YP_001752953.1 KEGG: bvi:Bcep1808_6051 hypothetical protein YP_001752954.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: azc:AZC_0072 putative amidohydrolase YP_001752955.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rle:RL0659 hypothetical protein YP_001752956.1 PFAM: GCN5-related N-acetyltransferase; KEGG: azc:AZC_0070 putative histone acetyltransferase YP_001752957.1 PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: gdi:GDI3746 hypothetical protein YP_001752958.1 PFAM: glycosyl transferase group 1; KEGG: azc:AZC_0068 glycosyltransferase YP_001752959.1 PFAM: FAD dependent oxidoreductase; KEGG: azc:AZC_0066 putative flavoprotein involved in K+ transport YP_001752960.1 KEGG: bbt:BBta_1735 putative exported protein of unknown function YP_001752961.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_2285 chemotaxis sensory transducer YP_001752964.1 KEGG: mex:Mext_3967 hypothetical protein YP_001752965.1 KEGG: mex:Mext_3660 hypothetical protein YP_001752966.1 KEGG: bra:BRADO3440 putative glucose/sorbosone dehydrogenase; putative peptide signal YP_001752967.1 KEGG: bra:BRADO3441 hypothetical protein YP_001752968.1 KEGG: smd:Smed_3779 hypothetical protein YP_001752969.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: reh:H16_B1249 esterase/lipase YP_001752970.1 KEGG: fal:FRAAL5920 putative GTP diphosphokinase YP_001752972.1 PFAM: PRC-barrel domain protein; KEGG: azc:AZC_0981 hypothetical protein YP_001752973.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bxe:Bxe_B1783 putative drug/metabolite transporter, (DMT) superfamily YP_001752974.1 KEGG: mex:Mext_2318 hypothetical protein YP_001752975.1 PFAM: nitroreductase; KEGG: mex:Mext_2317 nitroreductase YP_001752976.1 KEGG: mex:Mext_2316 hypothetical protein YP_001752977.1 KEGG: mex:Mext_2310 hypothetical protein YP_001752978.1 KEGG: mex:Mext_2309 conserved hypothetical protein YP_001752980.1 KEGG: mex:Mext_1371 hypothetical protein YP_001752981.1 KEGG: mex:Mext_1370 hypothetical protein YP_001752982.1 PFAM: glycoside hydrolase family 8; KEGG: mex:Mext_1369 cellulase YP_001752983.1 KEGG: mex:Mext_1368 hypothetical protein YP_001752984.1 KEGG: mex:Mext_1367 cellulose synthase catalytic subunit (UDP-forming); TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: glycosyl transferase family 2 YP_001752985.1 PFAM: response regulator receiver; histidine kinase A domain protein; KEGG: mex:Mext_1365 response regulator receiver YP_001752986.1 KEGG: mex:Mext_1366 hypothetical protein YP_001752987.1 KEGG: mex:Mext_4122 hypothetical protein YP_001752988.1 PFAM: CsbD family protein; KEGG: mex:Mext_2495 CsbD family protein YP_001752989.1 PFAM: Peptidase M23; KEGG: mex:Mext_1023 peptidase M23B YP_001752991.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: gbe:GbCGDNIH1_0469 acid phosphatase YP_001752992.1 PFAM: major facilitator superfamily MFS_1; KEGG: rpd:RPD_4227 major facilitator superfamily MFS_1 YP_001752993.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: rpd:RPD_3330 hydrophobe/amphiphile efflux-1 HAE1 YP_001752994.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rpd:RPD_3329 secretion protein HlyD YP_001752995.1 PFAM: regulatory protein TetR; KEGG: zmo:ZMO1547 transcriptional regulator YP_001752996.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: rpa:RPA1796 putative adenylate/guanylate cyclase YP_001752997.1 PFAM: monooxygenase FAD-binding; KEGG: xau:Xaut_2227 monooxygenase FAD-binding YP_001752998.1 KEGG: mex:Mext_3617 hypothetical protein YP_001752999.1 KEGG: mex:Mext_0497 hypothetical protein YP_001753000.1 KEGG: mex:Mext_3394 hypothetical protein YP_001753001.1 KEGG: mex:Mext_2210 hypothetical protein YP_001753002.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: rle:RL3183 putative transmembrane protein YP_001753003.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pna:Pnap_3518 ABC transporter related YP_001753004.1 PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_4055 ABC transporter related YP_001753005.1 PFAM: inner-membrane translocator; KEGG: pna:Pnap_3520 inner-membrane translocator YP_001753006.1 PFAM: Extracellular ligand-binding receptor; KEGG: xau:Xaut_4053 extracellular ligand-binding receptor YP_001753007.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: azc:AZC_0452 hypothetical protein YP_001753008.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ret:RHE_CH03538 putative transcriptional regulator protein, LysR family YP_001753009.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: bte:BTH_II0588 tautomerase enzyme family protein YP_001753010.1 Catalyzes the rate-limiting step in dNTP synthesis YP_001753011.1 PFAM: NADH:ubiquinone oxidoreductase 17.2 kD subunit; KEGG: mex:Mext_1101 NADH:ubiquinone oxidoreductase 17.2 kD subunit YP_001753012.1 KEGG: mex:Mext_1100 conserved hypothetical protein YP_001753013.1 PFAM: polysaccharide deacetylase; KEGG: mex:Mext_1604 polysaccharide deacetylase YP_001753014.1 KEGG: mex:Mext_1603 conserved hypothetical protein; putative acyl-CoA N-acyltransferase related protein YP_001753015.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: mex:Mext_1859 lipopolysaccharide biosynthesis protein YP_001753016.1 PFAM: polysaccharide export protein; KEGG: mex:Mext_1858 polysaccharide export protein YP_001753017.1 KEGG: mex:Mext_2468 hypothetical protein YP_001753019.1 KEGG: mex:Mext_1602 hypothetical protein YP_001753020.1 KEGG: mex:Mext_1244 hypothetical protein YP_001753021.1 PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: mex:Mext_1245 glycosyl transferase family 51 YP_001753022.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: ret:RHE_CH02260 putative trehalose synthase (glycosyl hydrolase) protein YP_001753023.1 KEGG: mlo:mlr8188 hypothetical protein YP_001753024.1 PFAM: beta-lactamase domain protein; KEGG: mex:Mext_2576 beta-lactamase domain protein YP_001753025.1 PFAM: aldo/keto reductase; KEGG: xau:Xaut_0990 aldo/keto reductase YP_001753026.1 KEGG: mex:Mext_2577 DNA gyrase, B subunit; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; SMART: DNA topoisomerase II YP_001753027.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: bja:blr5281 two-component response regulator YP_001753028.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: bja:blr5280 similar to two-component sensor histidine kinase YP_001753029.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: gox:GOX0908 hypothetical protein YP_001753030.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: mva:Mvan_1606 glucose-methanol-choline oxidoreductase YP_001753031.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: rpb:RPB_0893 transcriptional regulator, Crp/Fnr family YP_001753032.1 KEGG: rpe:RPE_4396 hypothetical protein YP_001753033.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; CHASE2 domain protein; KEGG: rpe:RPE_4397 adenylate/guanylate cyclase YP_001753034.1 KEGG: reu:Reut_A2916 hypothetical protein YP_001753035.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bja:blr2694 VirG-like two component response regulator YP_001753036.1 KEGG: azc:AZC_2338 putative ABC transport protein substrate-binding component YP_001753037.1 unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity YP_001753038.1 KEGG: bpt:Bpet1390 methylmuconolactone isomerase; TIGRFAM: muconolactone delta-isomerase; PFAM: Muconolactone delta-isomerase YP_001753039.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: xau:Xaut_1613 glucose-methanol-choline oxidoreductase YP_001753040.1 PFAM: UBA/THIF-type NAD/FAD binding protein; Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: xau:Xaut_1616 shikimate dehydrogenase substrate binding domain protein YP_001753041.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_001753042.1 catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; catalytic YP_001753043.1 TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: xau:Xaut_0840 quinone oxidoreductase putative PIG3 YP_001753044.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: dac:Daci_4519 alcohol dehydrogenase GroES domain protein YP_001753045.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bmt:BSUIS_B0393 hypothetical protein YP_001753047.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mag:amb3267 methyl-accepting chemotaxis protein YP_001753048.1 TIGRFAM: phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related; KEGG: bja:bll6631 probable phosphatidylserine decarboxylase proenzyme YP_001753049.1 PFAM: aminotransferase class-III; KEGG: bbt:BBta_6209 putative glutamate-1-semialdehyde 2,1-aminomutase (GSA) (glutamate-1-semialdehyde aminotransferase) YP_001753050.1 KEGG: nwi:Nwi_0697 hypothetical protein YP_001753051.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: bja:bll6634 probable phosphatidylethanolamine N-methyltransferase YP_001753052.1 KEGG: mex:Mext_1049 hypothetical protein YP_001753053.1 KEGG: mex:Mext_1193 hypothetical protein YP_001753054.1 KEGG: syd:Syncc9605_1527 hypothetical protein YP_001753055.1 malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate YP_001753056.1 KEGG: rpc:RPC_3215 hypothetical protein YP_001753057.1 KEGG: bch:Bcen2424_1274 triphosphoribosyl-dephospho-CoA synthase; TIGRFAM: triphosphoribosyl-dephospho-CoA synthase MdcB; PFAM: triphosphoribosyl-dephospho-CoA protein YP_001753058.1 KEGG: gox:GOX0028 hypothetical protein YP_001753059.1 PFAM: Methyltransferase type 11; KEGG: oan:Oant_2453 methyltransferase type 12 YP_001753060.1 PFAM: coenzyme A transferase; KEGG: mex:Mext_2071 coenzyme A transferase YP_001753063.1 PFAM: FAD dependent oxidoreductase; KEGG: vei:Veis_0184 FAD dependent oxidoreductase YP_001753064.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:blr2226 amino acid ABC transporter ATP-binding protein YP_001753065.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr2225 amino acid ABC transporter permease protein YP_001753066.1 PFAM: extracellular solute-binding protein family 3; KEGG: bja:blr2224 ABC transporter amino acid-binding protein YP_001753067.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: bja:bll2223 probable transcriptional regulator YP_001753068.1 KEGG: bra:BRADO0587 conserved hypothetical protein; putative vWFA domain YP_001753069.1 PFAM: TadE family protein; KEGG: mex:Mext_3512 TadE family protein YP_001753070.1 PFAM: TadE family protein; KEGG: rpa:RPA0729 hypothetical protein YP_001753071.1 KEGG: nha:Nham_3193 hypothetical protein YP_001753072.1 KEGG: nha:Nham_4035 response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_001753073.1 PFAM: sodium:dicarboxylate symporter; KEGG: mex:Mext_3059 sodium:dicarboxylate symporter YP_001753074.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_3060 ATP-binding region ATPase domain protein YP_001753075.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: mex:Mext_3061 sigma-54 factor interaction domain-containing protein YP_001753076.1 KEGG: mex:Mext_1879 hypothetical protein YP_001753077.1 KEGG: mlo:mlr9591 sensory transduction histidine kinase YP_001753078.1 KEGG: mex:Mext_1134 hypothetical protein YP_001753079.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_1133 cellulose synthase (UDP-forming) YP_001753081.1 KEGG: nar:Saro_3004 phage uncharacterized protein-like YP_001753082.1 PFAM: transposase IS3/IS911 family protein; KEGG: azc:AZC_3852 transposase YP_001753083.1 PFAM: Integrase catalytic region; KEGG: mgm:Mmc1_1989 integrase, catalytic region YP_001753087.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; KEGG: mex:Mext_4505 PAS sensor protein YP_001753089.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_0667 chemotaxis sensory transducer YP_001753090.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: mex:Mext_1331 diguanylate cyclase YP_001753091.1 KEGG: acr:Acry_1552 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; SMART: PAC repeat-containing protein YP_001753092.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: nha:Nham_1949 heavy metal translocating P-type ATPase YP_001753093.1 PFAM: UspA domain protein; KEGG: mex:Mext_1355 UspA domain protein YP_001753094.1 KEGG: mex:Mext_1356 cytochrome c class I YP_001753095.1 PFAM: BLUF domain protein; KEGG: swi:Swit_4662 BLUF domain protein YP_001753096.1 PFAM: UspA domain protein; KEGG: mex:Mext_3508 UspA domain protein YP_001753097.1 KEGG: mex:Mext_3507 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001753098.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: mex:Mext_3506 response regulator receiver YP_001753099.1 PFAM: response regulator receiver; KEGG: bja:bll2758 two-component response regulator YP_001753100.1 KEGG: nar:Saro_3788 multidrug resistance efflux pump-like protein YP_001753101.1 KEGG: nar:Saro_3789 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain-like protein YP_001753102.1 KEGG: mex:Mext_1780 hypothetical protein YP_001753103.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rpb:RPB_3829 transcriptional regulator, LysR family YP_001753104.1 KEGG: mes:Meso_2143 SPW repeat YP_001753106.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mex:Mext_3505 regulatory protein Crp YP_001753107.1 PFAM: UspA domain protein; KEGG: mex:Mext_3504 UspA domain protein YP_001753108.1 KEGG: mex:Mext_1970 hypothetical protein YP_001753109.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: pin:Ping_2670 ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_001753110.1 KEGG: bbt:BBta_0349 hypothetical protein YP_001753111.1 KEGG: mex:Mext_2287 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41 YP_001753112.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; magnesium-translocating P-type ATPase; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: xau:Xaut_0631 magnesium-translocating P-type ATPase YP_001753113.1 PFAM: protein of unknown function DUF1476; KEGG: nar:Saro_2521 protein of unknown function DUF1476 YP_001753114.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: rle:RL1878 putative peptidoglycan binding protein YP_001753116.1 KEGG: nha:Nham_1920 hypothetical protein YP_001753118.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: eba:ebA2248 putative acetate kinase YP_001753119.1 PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: bbt:BBta_2340 putative phosphoketolase YP_001753120.1 KEGG: mex:Mext_3503 hypothetical protein YP_001753121.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: ret:RHE_PD00022 hypothetical protein YP_001753122.1 TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: bcs:BCAN_A1076 zinc-binding alcohol dehydrogenase family protein YP_001753123.1 PFAM: UspA domain protein; KEGG: mex:Mext_1355 UspA domain protein YP_001753124.1 PFAM: cytochrome c class I; KEGG: mex:Mext_1356 cytochrome c class I YP_001753125.1 PFAM: UspA domain protein; KEGG: mag:amb1529 universal stress protein UspA and related nucleotide-binding protein YP_001753126.1 PFAM: UspA domain protein; KEGG: mex:Mext_3500 UspA domain protein YP_001753127.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: ret:RHE_PD00022 hypothetical protein YP_001753128.1 KEGG: mex:Mext_0074 response regulator receiver protein YP_001753130.1 KEGG: rpc:RPC_2864 hypothetical protein YP_001753131.1 PFAM: Ion transport 2 domain protein; KEGG: mpt:Mpe_A3241 hypothetical protein YP_001753132.1 KEGG: swi:Swit_0841 biotin/lipoyl attachment domain-containing protein YP_001753133.1 KEGG: mes:Meso_2143 SPW repeat YP_001753134.1 KEGG: rpd:RPD_0768 putative cytochrome c552 precursor YP_001753135.1 PFAM: UspA domain protein; KEGG: mex:Mext_0489 UspA domain protein YP_001753136.1 PFAM: Integrase catalytic region; KEGG: ret:RHE_PA00091 probable insertion sequence transposase protein YP_001753137.1 PFAM: transposase IS3/IS911 family protein; KEGG: yps:pYV0018 putative transposase YP_001753138.1 PFAM: CHRD domain containing protein; KEGG: nha:Nham_1308 CHRD YP_001753140.1 PFAM: aldo/keto reductase; KEGG: mex:Mext_3859 aldo/keto reductase YP_001753141.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein; KEGG: mex:Mext_3858 NADP oxidoreductase coenzyme F420-dependent YP_001753142.1 KEGG: mex:Mext_3857 hypothetical protein YP_001753144.1 KEGG: mex:Mext_3987 hypothetical protein YP_001753145.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway YP_001753146.1 KEGG: bra:BRADO5245 hypothetical protein; putative exported protein YP_001753147.1 PFAM: protein of unknown function UPF0066; KEGG: mex:Mext_0709 protein of unknown function UPF0066 YP_001753148.1 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile YP_001753149.1 KEGG: mex:Mext_0048 hypothetical protein YP_001753150.1 PFAM: sodium/sulphate symporter; Citrate transporter; KEGG: mex:Mext_3599 sodium/sulphate symporter YP_001753151.1 TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: mex:Mext_3600 succinate dehydrogenase, cytochrome b556 subunit YP_001753152.1 TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: mex:Mext_3601 succinate dehydrogenase, hydrophobic membrane anchor protein YP_001753153.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol YP_001753154.1 KEGG: mex:Mext_3604 succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin YP_001753155.1 KEGG: mex:Mext_3605 outer membrane lipoprotein omp19 YP_001753156.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_0665 ABC transporter related YP_001753157.1 TIGRFAM: ubiquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: mex:Mext_2542 ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_001753158.1 PFAM: Cytochrome b/b6 domain; KEGG: mex:Mext_2543 cytochrome b/b6 domain YP_001753159.1 PFAM: cytochrome c1; KEGG: mex:Mext_2544 cytochrome c1 YP_001753160.1 Catalyzes the reversible phosphorolysis of 5'-deoxy-5'- methylthioadenosine (MTA) to adenine and 5-methylthio-D-ribose-1- phosphate YP_001753161.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis YP_001753162.1 KEGG: mex:Mext_2549 hypothetical protein YP_001753163.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide YP_001753164.1 TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein; KEGG: mex:Mext_2551 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_001753165.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase YP_001753166.1 KEGG: mex:Mext_3313 dihydroorotase, multifunctional complex type; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase YP_001753167.1 PFAM: protein of unknown function DUF205; KEGG: mex:Mext_3314 protein of unknown function DUF205 YP_001753168.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: mex:Mext_3315 DNA protecting protein DprA YP_001753169.1 PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: mex:Mext_3319 Holliday junction resolvase YqgF YP_001753170.1 KEGG: mex:Mext_3320 hypothetical protein YP_001753172.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: mex:Mext_3322 glutamyl-tRNA(Gln) amidotransferase, C subunit YP_001753173.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_001753174.1 KEGG: mex:Mext_3324 hypothetical protein YP_001753175.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB/Yqey domain protein; GatB region; GatB central domain protein; KEGG: mex:Mext_3064 glutamyl-tRNA(Gln) amidotransferase, B subunit YP_001753176.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_4754 secretion protein HlyD family protein YP_001753177.1 PFAM: protein of unknown function DUF1656; KEGG: mex:Mext_4755 protein of unknown function DUF1656 YP_001753178.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: mex:Mext_4756 fusaric acid resistance protein conserved region YP_001753179.1 KEGG: mex:Mext_4758 hypothetical protein YP_001753180.1 PFAM: Glutathione S-transferase domain; KEGG: mex:Mext_4759 glutathione S-transferase domain YP_001753181.1 KEGG: mex:Mext_2011 hypothetical protein YP_001753182.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate YP_001753183.1 KEGG: mex:Mext_2013 hypothetical protein YP_001753184.1 TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: mex:Mext_2062 phosphoribosylglycinamide formyltransferase YP_001753185.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis YP_001753186.1 PFAM: protein of unknown function UPF0118; KEGG: mex:Mext_2065 protein of unknown function UPF0118 YP_001753187.1 PFAM: Chromosomal replication initiator DnaA; KEGG: mex:Mext_2066 chromosomal replication initiator DnaA YP_001753188.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate YP_001753189.1 PFAM: Ppx/GppA phosphatase; KEGG: mex:Mext_2068 Ppx/GppA phosphatase YP_001753190.1 PFAM: globin; histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: azc:AZC_1078 histidine kinase YP_001753191.1 PFAM: Acetamidase/Formamidase; KEGG: mex:Mext_0828 acetamidase/formamidase YP_001753192.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate YP_001753193.1 KEGG: mex:Mext_0826 chloramphenicol acetyltransferase YP_001753194.1 KEGG: mex:Mext_0825 hypothetical protein YP_001753195.1 KEGG: mex:Mext_4117 hypothetical protein YP_001753196.1 PFAM: acyltransferase 3; KEGG: mex:Mext_4003 acyltransferase 3 YP_001753197.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_4004 glycosyl transferase family 2 YP_001753198.1 TIGRFAM: aspartyl-tRNA synthetase; PFAM: GAD domain protein; tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: mex:Mext_4005 aspartyl-tRNA synthetase YP_001753199.1 KEGG: mex:Mext_2916 hypothetical protein YP_001753200.1 TIGRFAM: ribonuclease D; PFAM: HRDC domain protein; 3'-5' exonuclease; KEGG: mex:Mext_2915 ribonuclease D YP_001753201.1 KEGG: mex:Mext_2914 hypothetical protein YP_001753202.1 TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: mex:Mext_1809 PQQ-dependent dehydrogenase, methanol/ethanol family YP_001753203.1 KEGG: mex:Mext_1810 hypothetical protein YP_001753204.1 SMART: extracellular solute-binding protein family 3; KEGG: mex:Mext_1811 extracellular solute-binding protein family 3 YP_001753205.1 KEGG: mex:Mext_1812 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK YP_001753206.1 TIGRFAM: dihydroneopterin aldolase; KEGG: mex:Mext_1813 dihydroneopterin aldolase YP_001753207.1 KEGG: mex:Mext_1814 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_001753208.1 KEGG: mex:Mext_1815 hypothetical protein YP_001753209.1 KEGG: mex:Mext_1816 hypothetical protein YP_001753210.1 TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM domain protein; KEGG: mex:Mext_1817 coenzyme PQQ biosynthesis protein E YP_001753211.1 KEGG: mex:Mext_1818 coenzyme PQQ biosynthesis protein C; TIGRFAM: coenzyme PQQ biosynthesis protein C; PFAM: TENA/THI-4 domain protein; coenzyme PQQ synthesis D YP_001753212.1 possibly involved in transport of pyrroloquinoline quinone transport YP_001753213.1 Required for coenzyme pyrroloquinoline quinone (PQQ) biosynthesis; probably provides the glutamate and tyrosine residues that are cross-linked and modified to form the coenzyme YP_001753214.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_1821 response regulator receiver YP_001753215.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mex:Mext_1822 ATP-binding region ATPase domain protein YP_001753216.1 KEGG: mex:Mext_1823 hypothetical protein YP_001753217.1 TIGRFAM: formylmethanofuran dehydrogenase subunit C; PFAM: glutamate synthase alpha subunit domain protein; KEGG: mex:Mext_1824 formylmethanofuran dehydrogenase subunit C YP_001753218.1 catalyzes the transfer of a formyl group from formylmethanofuran to tetrahydromethanopterin tetrahydromethanopterin YP_001753219.1 TIGRFAM: formylmethanofuran dehydrogenase subunit A; PFAM: Amidohydrolase 3; KEGG: mex:Mext_1826 formylmethanofuran dehydrogenase subunit A YP_001753220.1 KEGG: mex:Mext_1827 tungsten-containing formylmethanofuran dehydrogenase, subunit B YP_001753221.1 TIGRFAM: beta-ribofuranosylaminobenzene 5'-phosphate synthase family; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: mex:Mext_1828 beta-ribofuranosylaminobenzene 5'-phosphate synthase family YP_001753222.1 PFAM: Methylene-tetrahydromethanopterin dehydrogenase; KEGG: mex:Mext_1829 methylene-tetrahydromethanopterin dehydrogenase YP_001753223.1 PFAM: protein of unknown function DUF201; KEGG: mex:Mext_1830 protein of unknown function DUF201 YP_001753224.1 catalyzes the reversible formation of methenyl-H(4)methanopterin from N(5)-formyl-H(4)methanopterin YP_001753225.1 TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: protein of unknown function DUF201; RimK domain protein ATP-grasp; KEGG: mex:Mext_1832 alpha-L-glutamate ligase, RimK family YP_001753226.1 PFAM: triphosphoribosyl-dephospho-CoA protein; KEGG: mex:Mext_1833 triphosphoribosyl-dephospho-CoA protein YP_001753227.1 TIGRFAM: formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme (Fae); KEGG: mex:Mext_1834 formaldehyde-activating enzyme YP_001753228.1 TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: mex:Mext_4782 chaperonin GroEL YP_001753229.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring YP_001753230.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: mex:Mext_4784 Mg2 transporter protein CorA family protein YP_001753231.1 KEGG: mex:Mext_4505 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAC repeat-containing protein YP_001753232.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_3155 putative ICC-like phosphoesterase YP_001753233.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicases; KEGG: mex:Mext_3154 DEAD/H associated domain protein YP_001753234.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mex:Mext_3153 alpha/beta hydrolase fold-3 domain protein YP_001753235.1 KEGG: mex:Mext_3152 hypothetical protein YP_001753236.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: xau:Xaut_1467 MATE efflux family protein YP_001753237.1 KEGG: mex:Mext_2143 hypothetical protein YP_001753238.1 PFAM: HpcH/HpaI aldolase; KEGG: mex:Mext_2147 citrate (pro-3S)-lyase YP_001753239.1 KEGG: mex:Mext_2104 hypothetical protein YP_001753240.1 TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: mex:Mext_2105 oxidoreductase alpha (molybdopterin) subunit YP_001753241.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors YP_001753242.1 PFAM: protein of unknown function DUF952; KEGG: mex:Mext_2107 protein of unknown function DUF952 YP_001753243.1 PFAM: peptidase S24 and S26 domain protein; KEGG: mex:Mext_2108 peptidase S24 and S26 domain protein YP_001753244.1 KEGG: mex:Mext_2255 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein YP_001753245.1 PFAM: import inner membrane translocase subunit Tim44; KEGG: mex:Mext_2254 import inner membrane translocase subunit Tim44 YP_001753246.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin YP_001753247.1 KEGG: mex:Mext_3638 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA YP_001753248.1 PFAM: OstA family protein; Organic solvent tolerance protein; KEGG: mex:Mext_3648 organic solvent tolerance protein YP_001753249.1 PFAM: permease YjgP/YjgQ family protein; KEGG: mex:Mext_3649 permease YjgP/YjgQ family protein YP_001753250.1 PFAM: permease YjgP/YjgQ family protein; KEGG: mex:Mext_3650 permease YjgP/YjgQ family protein YP_001753251.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: mex:Mext_3651 leucyl aminopeptidase YP_001753252.1 KEGG: mex:Mext_3652 hypothetical protein YP_001753253.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mex:Mext_3653 AMP-dependent synthetase and ligase YP_001753254.1 in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ YP_001753255.1 KEGG: mex:Mext_2546 hypothetical protein YP_001753256.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_1093 LysR substrate-binding YP_001753257.1 KEGG: mex:Mext_1092 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; HI0933 family protein YP_001753258.1 PFAM: protein of unknown function DUF1022; KEGG: mex:Mext_1091 protein of unknown function DUF1022 YP_001753259.1 KEGG: mex:Mext_1090 hypothetical protein YP_001753260.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus YP_001753261.1 TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: mex:Mext_1088 carbamoyl-phosphate synthase, large subunit YP_001753262.1 TIGRFAM: pseudoazurin; PFAM: blue (type 1) copper domain protein; KEGG: mex:Mext_1087 pseudoazurin YP_001753263.1 KEGG: mex:Mext_0616 hypothetical protein YP_001753264.1 TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain; KEGG: mex:Mext_0615 carbamoyl-phosphate synthase, small subunit YP_001753265.1 KEGG: mex:Mext_0614 GatB/YqeY YP_001753266.1 synthesizes RNA primers at the replication forks YP_001753267.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria YP_001753268.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mex:Mext_0606 adenylyl cyclase class-3/4/guanylyl cyclase YP_001753269.1 PFAM: glycosyl transferase family 2; KEGG: acr:Acry_0383 glycosyl transferase, family 2 YP_001753270.1 KEGG: rpb:RPB_0506 hypothetical protein YP_001753271.1 TIGRFAM: glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase; KEGG: mex:Mext_0605 glycine oxidase ThiO YP_001753272.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: mex:Mext_0604 thiamine biosynthesis protein ThiS YP_001753273.1 PFAM: thiazole biosynthesis family protein; KEGG: mex:Mext_0603 thiazole biosynthesis family protein YP_001753274.1 PFAM: thiamine monophosphate synthase; KEGG: mex:Mext_0602 thiamine monophosphate synthase YP_001753275.1 KEGG: mex:Mext_2215 putative proteasome-type protease YP_001753276.1 PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: mex:Mext_2214 transglutaminase domain protein YP_001753277.1 PFAM: protein of unknown function DUF403; KEGG: mex:Mext_2209 protein of unknown function DUF403 YP_001753278.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: mex:Mext_2208 protein of unknown function DUF404 YP_001753279.1 PFAM: DNA repair protein RadC; KEGG: mex:Mext_2207 DNA repair protein RadC YP_001753280.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: mex:Mext_2206 methionine aminopeptidase, type I YP_001753281.1 KEGG: mex:Mext_2204 hypothetical protein YP_001753282.1 PFAM: monooxygenase FAD-binding; KEGG: mex:Mext_2203 monooxygenase FAD-binding YP_001753284.1 KEGG: ccr:CC_2839 hypothetical protein YP_001753285.1 PFAM: protein of unknown function DUF1275; KEGG: gdi:GDI0471 hypothetical protein YP_001753286.1 KEGG: mex:Mext_2148 hypothetical protein YP_001753287.1 KEGG: mex:Mext_2794 hypothetical protein YP_001753288.1 KEGG: kpn:KPN_pKPN5p08190 hypothetical protein YP_001753289.1 KEGG: mex:Mext_4284 ATP-dependent helicase HrpB; TIGRFAM: ATP-dependent helicase HrpB; PFAM: helicase domain protein; helicase-associated domain protein; Helicase ATP-dependent domain protein; SMART: DEAD-like helicases YP_001753290.1 PFAM: thioesterase superfamily protein; KEGG: mex:Mext_1460 thioesterase superfamily protein YP_001753291.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bja:blr6437 gluconolactonase precursor YP_001753292.1 PFAM: protein of unknown function DUF1285; KEGG: mex:Mext_1461 protein of unknown function DUF1285 YP_001753293.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_1462 NUDIX hydrolase YP_001753294.1 KEGG: mex:Mext_1463 hypothetical protein YP_001753295.1 PFAM: Polynucleotide adenylyltransferase region; KEGG: mex:Mext_1464 polynucleotide adenylyltransferase region YP_001753296.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane YP_001753297.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit YP_001753298.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit YP_001753299.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit YP_001753300.1 TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; KEGG: mex:Mext_1469 ATP synthase F1, delta subunit YP_001753301.1 PFAM: DSBA oxidoreductase; KEGG: mex:Mext_1504 DsbA oxidoreductase YP_001753302.1 PFAM: DSBA oxidoreductase; KEGG: mex:Mext_2292 DsbA oxidoreductase YP_001753303.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming YP_001753304.1 KEGG: mex:Mext_2295 hypothetical protein YP_001753305.1 TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51; KEGG: mex:Mext_2530 monofunctional biosynthetic peptidoglycan transglycosylase YP_001753306.1 PFAM: Polyprenyl synthetase; KEGG: mex:Mext_2529 polyprenyl synthetase YP_001753307.1 PFAM: inner-membrane translocator; KEGG: atc:AGR_C_4262 membrane-spanning permease YP_001753308.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: oan:Oant_1425 ABC transporter related YP_001753309.1 KEGG: atc:AGR_C_4267 multiple sugar-binding periplasmic receptor ChvE precursor YP_001753310.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: azc:AZC_4173 short-chain dehydrogenase YP_001753311.1 PFAM: cyclic nucleotide-binding; Patatin; KEGG: ccr:CC_2171 hypothetical protein YP_001753313.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_3841 alpha/beta hydrolase fold YP_001753314.1 KEGG: mex:Mext_4283 hypothetical protein YP_001753315.1 TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS III domain protein; MutS II domain protein; MutS IV domain protein; KEGG: mex:Mext_4282 DNA mismatch repair protein MutS YP_001753316.1 LovR from Caulobacter crescentus is a response regulator part of a two-component signaling system that regulates photosensitive bacterial cell-surface and cell-cell attachment YP_001753317.1 KEGG: mex:Mext_4037 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; SMART: PAC repeat-containing protein YP_001753318.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_4038 major facilitator superfamily MFS_1 YP_001753319.1 KEGG: mex:Mext_4039 hypothetical protein YP_001753320.1 PFAM: MgtC/SapB transporter; KEGG: mex:Mext_2886 MgtC/SapB transporter YP_001753321.1 TIGRFAM: threonine dehydratase, biosynthetic; PFAM: Threonine dehydratase domain protein; Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: mex:Mext_3032 threonine dehydratase, biosynthetic YP_001753322.1 PFAM: diacylglycerol kinase; KEGG: mex:Mext_3213 diacylglycerol kinase YP_001753323.1 TIGRFAM: membrane protein AbrB duplication; PFAM: putative ammonia monooxygenase; KEGG: mex:Mext_3212 membrane protein AbrB duplication YP_001753324.1 PFAM: fumarate lyase; KEGG: rsa:RSal33209_1825 argininosuccinate lyase YP_001753325.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_3211 LysR substrate-binding YP_001753326.1 PFAM: Catalase domain protein; KEGG: mex:Mext_3210 catalase YP_001753327.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: sco:SCO4483 hypothetical protein YP_001753328.1 PFAM: major facilitator superfamily MFS_1; KEGG: pap:PSPA7_3647 probable MFS transporter YP_001753329.1 Transfers the fatty acyl group on membrane lipoproteins YP_001753330.1 PFAM: CBS domain containing protein; transporter-associated region; KEGG: mex:Mext_3207 CBS domain containing protein YP_001753331.1 PFAM: protein of unknown function UPF0054; KEGG: mex:Mext_3206 protein of unknown function UPF0054 YP_001753332.1 PFAM: PhoH family protein; KEGG: mex:Mext_3205 PhoH family protein YP_001753333.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A) YP_001753334.1 TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: mex:Mext_4223 L-lactate transport YP_001753335.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: mex:Mext_3201 phospholipid/glycerol acyltransferase YP_001753336.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_3200 GCN5-related N-acetyltransferase YP_001753337.1 PFAM: peptidase M22 glycoprotease; KEGG: mex:Mext_3199 peptidase M22 glycoprotease YP_001753338.1 PFAM: nitrogen-fixing NifU domain protein; Scaffold protein Nfu/NifU; KEGG: mex:Mext_3198 scaffold protein Nfu/NifU YP_001753339.1 KEGG: nca:Noca_4254 kinetoplast DNA-associated protein YP_001753340.1 KEGG: pca:Pcar_1372 putative methyl-accepting chemotaxis protein (MCP) YP_001753341.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mex:Mext_3991 HAD-superfamily hydrolase, subfamily IA, variant 1 YP_001753342.1 KEGG: mex:Mext_3992 hypothetical protein YP_001753343.1 KEGG: mex:Mext_3945 hypothetical protein YP_001753345.1 KEGG: mex:Mext_3946 hypothetical protein YP_001753346.1 KEGG: mex:Mext_1694 hypothetical protein YP_001753347.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia YP_001753348.1 KEGG: mex:Mext_1692 hypothetical protein YP_001753349.1 PFAM: extracellular solute-binding protein family 5; KEGG: mex:Mext_1277 extracellular solute-binding protein family 5 YP_001753350.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_1278 binding-protein-dependent transport systems inner membrane component YP_001753351.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_1279 binding-protein-dependent transport systems inner membrane component YP_001753352.1 KEGG: mex:Mext_1280 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_001753353.1 KEGG: mex:Mext_1281 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_001753355.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: rxy:Rxyl_0136 transcriptional regulator, GntR family YP_001753356.1 PFAM: Negative transcriptional regulator; KEGG: spe:Spro_1466 FMN-binding negative transcriptional regulator YP_001753357.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bbr:BB2429 putative GNAT-family acetyltransferase YP_001753358.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: xac:XAC2128 2-keto-gluconate dehydrogenase YP_001753359.1 PFAM: alpha/beta hydrolase fold; Thioesterase; KEGG: kra:Krad_0758 alpha/beta hydrolase fold YP_001753360.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rpb:RPB_3736 GCN5-related N-acetyltransferase YP_001753361.1 KEGG: mex:Mext_3873 exodeoxyribonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type YP_001753362.1 PFAM: major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B1252 major facilitator superfamily (MFS) multidrug efflux pump YP_001753363.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: mex:Mext_2290 general substrate transporter YP_001753365.1 KEGG: nwi:Nwi_2640 hypothetical protein YP_001753368.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mca:MCA2449 capsular polysaccharide biosynthesis protein I YP_001753369.1 PFAM: cytochrome c class I; KEGG: mex:Mext_0924 cytochrome c class I YP_001753370.1 PFAM: regulatory protein MarR; KEGG: mex:Mext_0925 regulatory protein MarR YP_001753371.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: mex:Mext_2512 tyrosine recombinase XerD YP_001753372.1 KEGG: mex:Mext_2511 hypothetical protein YP_001753373.1 PFAM: shikimate kinase; KEGG: mex:Mext_1641 shikimate kinase, 3-dehydroquinate synthase YP_001753374.1 PFAM: 3-dehydroquinate synthase; KEGG: mex:Mext_1641 shikimate kinase, 3-dehydroquinate synthase YP_001753375.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: sma:SAV7448 NADH-dehydrogenase YP_001753376.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: sma:SAV7447 dehydrogenase YP_001753377.1 PFAM: Na+/H+ antiporter MnhB subunit-related protein; KEGG: sma:SAV7446 hypothetical protein YP_001753378.1 KEGG: sma:SAV7445 hypothetical protein YP_001753379.1 KEGG: hha:Hhal_2029 monovalent cation/proton antiporter, MnhG/PhaG subunit YP_001753380.1 KEGG: aeh:Mlg_0739 multiple resistance and pH regulation protein F YP_001753382.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_0904 NUDIX hydrolase YP_001753383.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation YP_001753384.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: mex:Mext_3149 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_001753385.1 PFAM: response regulator receiver; KEGG: mex:Mext_3150 response regulator receiver YP_001753386.1 KEGG: mex:Mext_3975 conserved hypothetical protein; putative alpha/beta hydrolase domain YP_001753387.1 PFAM: aminotransferase class V; KEGG: mex:Mext_3976 aminotransferase class V YP_001753388.1 TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: mex:Mext_3977 FeS assembly protein SufB YP_001753389.1 KEGG: ade:Adeh_2445 conserved hypothetical cytosolic protein YP_001753390.1 KEGG: mex:Mext_3978 FeS assembly ATPase SufC; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase YP_001753391.1 PFAM: SufBD protein; KEGG: mex:Mext_3979 FeS assembly protein SufD YP_001753392.1 TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mex:Mext_3980 cysteine desulfurase, SufS subfamily YP_001753393.1 TIGRFAM: FeS assembly SUF system protein; PFAM: protein of unknown function DUF59; KEGG: mex:Mext_3981 FeS assembly SUF system protein YP_001753395.1 KEGG: mex:Mext_4791 hypothetical protein YP_001753397.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_0380 ABC transporter related YP_001753398.1 PFAM: ABC-2 type transporter; KEGG: mex:Mext_0379 ABC-2 type transporter YP_001753399.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_0377 alpha/beta hydrolase fold YP_001753400.1 TIGRFAM: methyltransferase FkbM family; KEGG: mex:Mext_0376 methyltransferase FkbM family YP_001753401.1 PFAM: sugar fermentation stimulation protein; KEGG: mex:Mext_0375 sugar fermentation stimulation protein YP_001753402.1 PFAM: molybdopterin binding domain; KEGG: mex:Mext_0374 molybdopterin binding domain YP_001753403.1 KEGG: mex:Mext_0373 putative transport protein, YfdC-like protein YP_001753404.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: gdi:GDI0312 putative NADH dehydrogenase YP_001753405.1 PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: mex:Mext_3172 H+transporting two-sector ATPase B/B' subunit YP_001753406.1 PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: mex:Mext_3173 H+transporting two-sector ATPase B/B' subunit YP_001753407.1 TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit; KEGG: mex:Mext_3174 H+transporting two-sector ATPase C subunit YP_001753408.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0 YP_001753409.1 KEGG: mex:Mext_3176 conserved hypothetical protein YP_001753410.1 KEGG: mex:Mext_3177 DsbA oxidoreductase YP_001753411.1 PFAM: protein of unknown function DUF1159; KEGG: mex:Mext_3178 protein of unknown function DUF1159 YP_001753412.1 TIGRFAM: A/G-specific adenine glycosylase; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; KEGG: mex:Mext_3180 A/G-specific adenine glycosylase YP_001753413.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: mex:Mext_3181 DNA methylase N-4/N-6 domain protein YP_001753414.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: mex:Mext_3182 rare lipoprotein A YP_001753415.1 KEGG: mex:Mext_3183 hypothetical protein YP_001753416.1 KEGG: mex:Mext_3184 hypothetical protein YP_001753417.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_3185 ABC transporter related YP_001753418.1 PFAM: peptidase M32 carboxypeptidase Taq metallopeptidase; KEGG: mex:Mext_0276 carboxypeptidase Taq YP_001753419.1 KEGG: rpc:RPC_1186 hypothetical protein YP_001753420.1 PFAM: metallophosphoesterase; KEGG: rpd:RPD_3627 metallophosphoesterase YP_001753421.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: mex:Mext_4437 endonuclease/exonuclease/phosphatase YP_001753422.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: mex:Mext_4438 phospholipase D/transphosphatidylase YP_001753423.1 KEGG: mex:Mext_4872 hypothetical protein YP_001753424.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001753425.1 KEGG: mex:Mext_4606 AMP-dependent synthetase and ligase YP_001753426.1 KEGG: mex:Mext_1594 hypothetical protein YP_001753427.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: mex:Mext_1473 uracil-DNA glycosylase superfamily YP_001753428.1 PFAM: ferrochelatase; KEGG: mex:Mext_1470 ferrochelatase YP_001753430.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: mex:Mext_1477 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001753431.1 TIGRFAM: preprotein translocase, SecA subunit; PFAM: SEC-C motif domain protein; SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; KEGG: mex:Mext_1478 preprotein translocase, SecA subunit YP_001753432.1 TIGRFAM: dethiobiotin synthase; KEGG: mex:Mext_2332 dethiobiotin synthase YP_001753433.1 PFAM: K potassium transporter; KEGG: mex:Mext_2282 K potassium transporter YP_001753434.1 PFAM: CsbD family protein; KEGG: mex:Mext_2135 hypothetical protein YP_001753435.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine YP_001753436.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: PAS domain containing protein; KEGG: mex:Mext_4432 ATP-binding region ATPase domain protein YP_001753437.1 PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: rso:RS05067 probable transmembrane protein YP_001753438.1 TIGRFAM: Tol-Pal system beta propeller repeat protein TolB; PFAM: TolB domain protein; WD40 domain protein beta Propeller; KEGG: mex:Mext_4760 Tol-Pal system beta propeller repeat protein TolB YP_001753439.1 TIGRFAM: protein TolA; PFAM: Tol-Pal system TolA; KEGG: mex:Mext_4761 protein TolA YP_001753440.1 TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mex:Mext_4762 biopolymer transport protein ExbD/TolR YP_001753441.1 TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; KEGG: mex:Mext_4763 protein TolQ YP_001753442.1 PFAM: HpcH/HpaI aldolase; KEGG: rle:pRL110432 putative 2,4-dihydroxydec-2-ene-1,10-dioic acid aldolase YP_001753443.1 TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; KEGG: mex:Mext_4765 tol-pal system-associated acyl-CoA thioesterase YP_001753444.1 KEGG: mex:Mext_4766 hypothetical protein YP_001753445.1 KEGG: mex:Mext_4768 Holliday junction DNA helicase RuvB; TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_001753446.1 KEGG: mex:Mext_1980 hypothetical protein YP_001753447.1 KEGG: mex:Mext_1979 hypothetical protein YP_001753448.1 KEGG: xcv:XCV3887 hypothetical protein YP_001753449.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: mex:Mext_1978 diguanylate cyclase YP_001753450.1 PFAM: regulatory protein LuxR; KEGG: mex:Mext_1977 regulatory protein LuxR YP_001753451.1 KEGG: mex:Mext_1974 putative DNA topoisomerase I YP_001753452.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_1973 glycosyl transferase group 1 YP_001753453.1 KEGG: mex:Mext_1972 hypothetical protein YP_001753454.1 PFAM: NADPH-dependent FMN reductase; KEGG: mex:Mext_3404 NADPH-dependent FMN reductase YP_001753455.1 PFAM: cytochrome B561; KEGG: xau:Xaut_2036 cytochrome b561 YP_001753456.1 KEGG: mex:Mext_4353 hypothetical protein YP_001753457.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: mex:Mext_4354 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_001753458.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate YP_001753461.1 KEGG: bra:BRADO2806 hypothetical protein YP_001753462.1 KEGG: mex:Mext_3591 hypothetical protein YP_001753463.1 KEGG: pol:Bpro_0461 hypothetical protein YP_001753464.1 KEGG: mag:amb3176 probable tartrate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_001753465.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: xau:Xaut_0373 two component transcriptional regulator, winged helix family YP_001753466.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bra:BRADO1412 putative two-component sensor histidine kinase YP_001753467.1 KEGG: bra:BRADO5932 conserved hypothetical protein; putative signal peptide YP_001753468.1 KEGG: bra:BRADO4877 conserved hypothetical protein; putative signal peptide YP_001753469.1 PFAM: phosphate transporter; KEGG: ret:RHE_CH00946 phosphate transporter protein YP_001753470.1 PFAM: protein of unknown function DUF47; KEGG: bja:blr4042 hypothetical protein YP_001753473.1 KEGG: rpc:RPC_2864 hypothetical protein YP_001753475.1 KEGG: mex:Mext_3217 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase YP_001753476.1 PFAM: protein of unknown function DUF323; KEGG: mex:Mext_3218 protein of unknown function DUF323 YP_001753477.1 KEGG: mex:Mext_3219 hypothetical protein YP_001753478.1 KEGG: mex:Mext_0521 adenylyl cyclase class-3/4/guanylyl cyclase YP_001753479.1 PFAM: amine oxidase; KEGG: azc:AZC_4484 amine oxidase precursor YP_001753480.1 KEGG: mex:Mext_4803 hypothetical protein YP_001753481.1 KEGG: mex:Mext_4802 ATP-dependent Clp protease, ATP-binding subunit ClpA; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase YP_001753482.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: mex:Mext_4801 ATP-dependent Clp protease adaptor protein ClpS YP_001753483.1 KEGG: swi:Swit_0862 phasin family protein YP_001753484.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Sporulation domain protein; KEGG: mex:Mext_4800 serine-type D-Ala-D-Ala carboxypeptidase YP_001753485.1 PFAM: heat shock protein DnaJ domain protein; KEGG: mex:Mext_4799 heat shock protein DnaJ domain protein YP_001753487.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: mex:Mext_4798 2-alkenal reductase YP_001753488.1 KEGG: mex:Mext_4797 hypothetical protein YP_001753489.1 KEGG: mex:Mext_2156 conserved hypothetical protein YP_001753490.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_2072 chemotaxis sensory transducer YP_001753491.1 KEGG: mex:Mext_2151 hypothetical protein YP_001753492.1 KEGG: mex:Mext_2150 hypothetical protein YP_001753493.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: mex:Mext_4646 peptidylprolyl isomerase FKBP-type YP_001753494.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: azc:AZC_0725 histidine kinase YP_001753495.1 KEGG: mex:Mext_3927 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein YP_001753496.1 catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate YP_001753497.1 KEGG: mex:Mext_4062 hypothetical protein YP_001753498.1 KEGG: mex:Mext_4061 hypothetical protein YP_001753499.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion YP_001753501.1 PFAM: Ankyrin; KEGG: mex:Mext_4065 ankyrin YP_001753502.1 PFAM: Pyrrolo-quinoline quinone; KEGG: mex:Mext_4524 pyrrolo-quinoline quinone YP_001753503.1 PFAM: O-antigen polymerase; KEGG: smd:Smed_4354 O-antigen polymerase YP_001753504.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mex:Mext_1930 alpha/beta hydrolase fold-3 domain protein YP_001753505.1 PFAM: Sporulation domain protein; Lytic transglycosylase catalytic; KEGG: mex:Mext_1931 lytic transglycosylase catalytic YP_001753506.1 PFAM: isochorismatase hydrolase; KEGG: mex:Mext_3854 isochorismatase hydrolase YP_001753507.1 SMART: serine/threonine protein kinase; leucine-rich repeat-containing protein typical subtype; KEGG: mex:Mext_3080 serine/threonine protein kinase YP_001753508.1 PFAM: protein of unknown function DUF1192; KEGG: bja:bsr1504 hypothetical protein YP_001753509.1 KEGG: mex:Mext_1934 phosphopentomutase; TIGRFAM: phosphopentomutase; PFAM: metalloenzyme domain protein; Phosphopentomutase domain protein YP_001753510.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_1933 ABC transporter related YP_001753511.1 KEGG: mex:Mext_3052 hypothetical protein YP_001753512.1 KEGG: mex:Mext_3051 hypothetical protein YP_001753513.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum YP_001753514.1 interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring YP_001753515.1 FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagellum YP_001753516.1 TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: mex:Mext_3047 flagellar basal-body rod protein FlgG YP_001753517.1 TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein; KEGG: mex:Mext_3046 flagella basal body P-ring formation protein FlgA YP_001753518.1 part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod YP_001753519.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: mex:Mext_3251 oxidoreductase domain protein YP_001753520.1 KEGG: mex:Mext_4321 type IV pilus assembly PilZ YP_001753521.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: mex:Mext_3250 phosphoesterase PA-phosphatase related YP_001753522.1 KEGG: mex:Mext_3249 hypothetical protein YP_001753523.1 KEGG: mex:Mext_2717 radical SAM domain protein YP_001753524.1 KEGG: mex:Mext_3248 hypothetical protein YP_001753526.1 PFAM: Glutathione S-transferase domain; KEGG: mex:Mext_2249 glutathione S-transferase domain YP_001753527.1 KEGG: mex:Mext_2250 hypothetical protein YP_001753528.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: mex:Mext_2251 thioredoxin domain YP_001753529.1 PFAM: peptidase S16 lon domain protein; KEGG: mex:Mext_2252 peptidase S16 lon domain protein YP_001753530.1 PFAM: protein of unknown function DUF343; KEGG: mex:Mext_2253 protein of unknown function DUF343 YP_001753531.1 KEGG: mex:Mext_1012 putative exported protein of unknown function YP_001753532.1 KEGG: mex:Mext_1011 hypothetical protein YP_001753533.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity YP_001753534.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_1009 major facilitator superfamily MFS_1 YP_001753536.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: xfa:XF1743 esterase YP_001753537.1 KEGG: csa:Csal_2956 hypothetical protein YP_001753538.1 KEGG: mex:Mext_0905 hypothetical protein YP_001753539.1 KEGG: mex:Mext_2526 hypothetical protein YP_001753540.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; KEGG: rpd:RPD_0292 protein of unknown function DUF21 YP_001753541.1 PFAM: aminotransferase class-III; KEGG: mex:Mext_2908 aminotransferase class-III YP_001753542.1 KEGG: mex:Mext_2907 protein of unknown function UPF0153 YP_001753543.1 KEGG: mex:Mext_0781 hypothetical protein YP_001753544.1 PFAM: glutathione peroxidase; KEGG: mex:Mext_3053 peroxiredoxin YP_001753546.1 PFAM: ATP12 ATPase; KEGG: mex:Mext_0281 ATP12 ATPase YP_001753547.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mex:Mext_0280 HAD-superfamily hydrolase, subfamily IA, variant 1 YP_001753548.1 KEGG: gga:769072 hypothetical protein LOC769072 YP_001753549.1 PFAM: alpha/beta hydrolase fold; KEGG: mag:amb2701 predicted hydrolase or acyltransferase YP_001753550.1 KEGG: mex:Mext_0278 pseudouridine synthase, RluA family; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase YP_001753551.1 PFAM: NUDIX hydrolase; KEGG: bja:blr7631 putative MutT/NUDIX family protein YP_001753552.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_2631 TonB-dependent siderophore receptor YP_001753553.1 PFAM: PepSY-associated TM helix domain protein; KEGG: rpb:RPB_0101 PepSY-associated TM helix YP_001753554.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_3951 TonB-dependent receptor plug YP_001753555.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: mex:Mext_2707 cobalamin synthesis protein P47K YP_001753556.1 PFAM: regulatory protein MarR; transcriptional regulator TrmB; KEGG: mex:Mext_0844 regulatory protein MarR YP_001753557.1 PFAM: response regulator receiver; KEGG: mex:Mext_0851 response regulator receiver YP_001753558.1 TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; KEGG: mex:Mext_0852 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_001753559.1 KEGG: mex:Mext_0857 8-amino-7-oxononanoate synthase; TIGRFAM: 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II YP_001753560.1 PFAM: OsmC family protein; KEGG: mex:Mext_0330 OsmC family protein YP_001753561.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mex:Mext_1032 methyltransferase type 11 YP_001753562.1 PFAM: gamma-glutamyltranspeptidase; KEGG: mex:Mext_1030 gamma-glutamyltransferase YP_001753563.1 PFAM: Carbohydrate-selective porin OprB; KEGG: mex:Mext_1384 carbohydrate-selective porin OprB YP_001753564.1 PFAM: sodium/hydrogen exchanger; KEGG: mex:Mext_0940 sodium/hydrogen exchanger YP_001753565.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione YP_001753566.1 KEGG: mex:Mext_0938 hypothetical protein YP_001753568.1 KEGG: mex:Mext_0937 hypothetical protein YP_001753569.1 KEGG: mex:Mext_0926 hypothetical protein YP_001753570.1 PFAM: protein of unknown function DUF1214; KEGG: mex:Mext_0927 protein of unknown function DUF1214 YP_001753571.1 KEGG: mex:Mext_0928 penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_001753572.1 PFAM: protein of unknown function UPF0153; KEGG: mex:Mext_0929 protein of unknown function UPF0153 YP_001753573.1 KEGG: pol:Bpro_4794 hypothetical protein YP_001753574.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bbt:BBta_3387 putative RNA polymerase ECF-type sigma factor YP_001753575.1 PFAM: protein of unknown function DUF1223; KEGG: bra:BRADO5149 conserved hypothetical protein; putative signal peptide YP_001753576.1 PFAM: Creatininase; KEGG: mex:Mext_2133 creatininase YP_001753577.1 KEGG: mex:Mext_0418 chemotaxis protein YP_001753578.1 PFAM: response regulator receiver; KEGG: mex:Mext_0419 response regulator receiver YP_001753579.1 TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; KEGG: mex:Mext_0420 riboflavin biosynthesis protein RibF YP_001753580.1 KEGG: mex:Mext_2968 hypothetical protein YP_001753581.1 KEGG: mex:Mext_2969 tetraacyldisaccharide 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase YP_001753582.1 PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; KEGG: mex:Mext_2970 three-deoxy-D-manno-octulosonic-acid transferase domain protein YP_001753583.1 PFAM: protein of unknown function DUF374; KEGG: mex:Mext_2971 protein of unknown function DUF374 YP_001753584.1 PFAM: protein of unknown function DUF125 transmembrane; KEGG: bbt:BBta_7128 putative membrane protein of unknown function YP_001753585.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_2972 metallophosphoesterase YP_001753586.1 KEGG: mex:Mext_0547 hypothetical protein YP_001753587.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia YP_001753589.1 catalyzes the release of C-terminal glutamate residues from N-acylating moieties YP_001753590.1 PFAM: MlrC domain protein; Microcystin LR degradation protein MlrC-like; KEGG: sil:SPO1209 MlrC domain protein YP_001753591.1 PFAM: peptidase S45 penicillin amidase; KEGG: vei:Veis_3277 penicillin amidase YP_001753592.1 thiamine-pyrophosphate requiring enzyme YP_001753593.1 PFAM: extracellular solute-binding protein family 5; KEGG: mex:Mext_1277 extracellular solute-binding protein family 5 YP_001753594.1 PFAM: Amidase; KEGG: bpe:BP3426 putative amidase YP_001753596.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mex:Mext_2578 RNA polymerase sigma factor, sigma-70 family YP_001753597.1 KEGG: bra:BRADO3845 nitrile hydratase subunit alpha (nitrilase) (NHase); TIGRFAM: nitrile hydratase, alpha subunit; PFAM: Nitrile hydratase alpha chain YP_001753598.1 PFAM: nitrile hydratase beta subunit; KEGG: bbt:BBta_4084 nitrile hydratase subunit beta (nitrilase) (NHase) YP_001753599.1 KEGG: ret:RHE_CH02781 hypothetical protein YP_001753600.1 KEGG: mex:Mext_4506 hypothetical protein YP_001753601.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_4507 short-chain dehydrogenase/reductase SDR YP_001753603.1 Synthesizes thioester adducts of fatty acids enzymatically to the phosphopantetheine group of acyl carrier protein YP_001753605.1 TIGRFAM: penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein; KEGG: mex:Mext_1396 penicillin-binding protein 1C YP_001753607.1 KEGG: pna:Pnap_4985 hypothetical protein YP_001753608.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: mex:Mext_2508 multiple antibiotic resistance (MarC)-related protein YP_001753609.1 PFAM: Methyltransferase type 11; KEGG: mex:Mext_2509 methyltransferase type 11 YP_001753610.1 KEGG: mex:Mext_2510 hydroxyacylglutathione hydrolase; TIGRFAM: hydroxyacylglutathione hydrolase; PFAM: beta-lactamase domain protein YP_001753611.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_1642 regulatory protein TetR YP_001753612.1 TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: Lactate/malate dehydrogenase; KEGG: mex:Mext_1643 malate dehydrogenase, NAD-dependent YP_001753613.1 KEGG: mex:Mext_1644 succinyl-CoA synthetase, beta subunit; TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp domain protein YP_001753614.1 TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: mex:Mext_1645 succinyl-CoA synthetase, alpha subunit YP_001753615.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide YP_001753616.1 KEGG: xau:Xaut_0157 YCII-related YP_001753617.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: mex:Mext_1647 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase YP_001753618.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rpc:RPC_0186 short-chain dehydrogenase/reductase SDR YP_001753619.1 Catalyzes the oxidation of dihydrolipoamide to lipoamide YP_001753620.1 PFAM: response regulator receiver; KEGG: azo:azo2402 putative sensor-regulator protein YP_001753621.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: mex:Mext_4288 tyrosine recombinase XerC YP_001753622.1 PFAM: protein of unknown function UPF0060; KEGG: mex:Mext_2715 protein of unknown function UPF0060 YP_001753623.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity YP_001753624.1 PFAM: type III restriction protein res subunit; KEGG: fre:Franean1_5135 type III restriction protein res subunit YP_001753625.1 KEGG: nha:Nham_2274 hypothetical protein YP_001753626.1 KEGG: mex:Mext_4369 hypothetical protein YP_001753627.1 PFAM: Ankyrin; KEGG: xcv:XCV3038 putative phospholipase accessory protein YP_001753628.1 PFAM: extracellular solute-binding protein family 1; KEGG: mex:Mext_4019 extracellular solute-binding protein family 1 YP_001753629.1 PFAM: Endoribonuclease L-PSP; KEGG: mex:Mext_4020 endoribonuclease L-PSP YP_001753630.1 PFAM: Transglycosylase-associated protein; KEGG: rpe:RPE_3640 transglycosylase-associated protein YP_001753631.1 KEGG: mex:Mext_4024 hypothetical protein YP_001753632.1 KEGG: mex:Mext_4027 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein YP_001753633.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence YP_001753634.1 KEGG: aba:Acid345_0738 hypothetical protein YP_001753636.1 PFAM: amino acid permease-associated region; KEGG: mex:Mext_4029 amino acid permease-associated region YP_001753637.1 KEGG: rpb:RPB_3776 flagellar basal body rod protein FlgC YP_001753638.1 PFAM: formyl transferase domain protein; KEGG: mex:Mext_2540 formyl transferase domain protein YP_001753639.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_2539 short-chain dehydrogenase/reductase SDR YP_001753640.1 PFAM: Capsule polysaccharide biosynthesis protein; KEGG: mex:Mext_2538 capsule polysaccharide biosynthesis protein YP_001753641.1 PFAM: Capsule polysaccharide biosynthesis protein; KEGG: mex:Mext_2537 capsule polysaccharide biosynthesis protein YP_001753642.1 PFAM: sulfatase; KEGG: mex:Mext_2536 sulfatase YP_001753643.1 PFAM: polysaccharide export protein; KEGG: mex:Mext_2535 polysaccharide export protein YP_001753644.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; aminotransferase class-III; KEGG: mex:Mext_1946 8-amino-7-oxononanoate synthase YP_001753645.1 PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase ; Acyl transferase; KEGG: mex:Mext_1947 beta-ketoacyl synthase YP_001753646.1 KEGG: mex:Mext_1948 nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_001753647.1 TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: mex:Mext_2342 acetylglutamate kinase YP_001753648.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; pyrimidine 5'-nucleotidase; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mex:Mext_2341 pyrimidine 5'-nucleotidase YP_001753649.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site YP_001753650.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bja:bll4327 putative methyl-accepting chemotaxis protein YP_001753651.1 PFAM: Endoribonuclease L-PSP; KEGG: rpe:RPE_4800 endoribonuclease L-PSP YP_001753652.1 TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: mex:Mext_4736 lytic murein transglycosylase YP_001753653.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: gbe:GbCGDNIH1_0637 DNA-binding protein YP_001753654.1 PFAM: regulatory protein TetR; KEGG: rle:RL2980 putative TetR family transcriptional regulator YP_001753655.1 PFAM: O-methyltransferase family 3; KEGG: bte:BTH_II0913 O-methyltransferase YP_001753656.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D YP_001753657.1 PFAM: histidine biosynthesis protein; KEGG: mex:Mext_1835 histidine biosynthesis protein YP_001753658.1 TIGRFAM: H4MPT-linked C1 transfer pathway protein; PFAM: Hydantoinase/oxoprolinase; KEGG: mex:Mext_1836 H4MPT-linked C1 transfer pathway protein YP_001753659.1 KEGG: mex:Mext_1837 hypothetical protein YP_001753660.1 KEGG: pen:PSEEN2117 hypothetical protein YP_001753661.1 PFAM: GCN5-related N-acetyltransferase; KEGG: dsh:Dshi_1743 GCN5-related N-acetyltransferase YP_001753662.1 TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: Radical SAM domain protein; KEGG: mex:Mext_3460 hopanoid biosynthesis associated radical SAM protein HpnH YP_001753663.1 TIGRFAM: hopanoid biosynthesis associated RND transporter like protein HpnN; KEGG: mex:Mext_3458 hopanoid biosynthesis associated RND transporter like protein HpnN YP_001753664.1 PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; KEGG: bra:BRADO2365 putative transcriptional regulatory protein, MarR family with a acetyltransferase (GNAT) domain YP_001753665.1 TIGRFAM: hopanoid biosynthesis associated protein HpnK; PFAM: YdjC family protein; KEGG: mex:Mext_3456 hopanoid biosynthesis associated protein HpnK YP_001753666.1 KEGG: mex:Mext_3455 hopanoid biosynthesis associated radical SAM protein HpnJ; TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnJ; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_001753667.1 TIGRFAM: hopanoid biosynthesis associated glycosyl transferase protein HpnI; PFAM: glycosyl transferase family 2; KEGG: mex:Mext_3454 putative glucosyltransferase YP_001753668.1 PFAM: toluene tolerance family protein; KEGG: mex:Mext_3453 toluene tolerance family protein YP_001753669.1 TIGRFAM: membrane protein; PFAM: conserved hypothetical protein; KEGG: mex:Mext_3452 membrane protein YP_001753670.1 PFAM: amidinotransferase; KEGG: mex:Mext_3451 non-specific serine/threonine protein kinase YP_001753671.1 PFAM: alpha/beta hydrolase fold; KEGG: bte:BTH_I1764 hydrolase, alpha/beta fold family YP_001753672.1 KEGG: mex:Mext_2780 hypothetical protein YP_001753673.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis YP_001753674.1 PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: xau:Xaut_1350 methyltransferase type 11 YP_001753675.1 KEGG: mex:Mext_2782 putative transmembrane protein YP_001753676.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis YP_001753677.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis YP_001753678.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mex:Mext_3188 adenylyl cyclase class-3/4/guanylyl cyclase YP_001753679.1 PFAM: Septum formation initiator; KEGG: mex:Mext_2785 septum formation initiator YP_001753680.1 KEGG: mex:Mext_2786 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; PFAM: dehydrogenase E1 component YP_001753681.1 catalyzes the oxidative decarboxylation of pyruvate with concomitant acetylation of a lipoic acid-containing dihydrolipoamide acetyltransferase within the complex. The E1 component of the pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase(E2) and lipoamide dehydrogenase YP_001753682.1 KEGG: mex:Mext_2788 hypothetical protein YP_001753683.1 PFAM: protein of unknown function DUF820; KEGG: mxa:MXAN_0519 hypothetical protein YP_001753684.1 KEGG: mex:Mext_2789 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein YP_001753686.1 E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide YP_001753688.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: reh:H16_B0554 threonine deaminase YP_001753689.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: mex:Mext_3982 FeS assembly scaffold SufA YP_001753690.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mex:Mext_3983 diguanylate cyclase YP_001753691.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mex:Mext_3984 DEAD/DEAH box helicase domain protein YP_001753692.1 KEGG: kra:Krad_4342 hypothetical protein YP_001753693.1 KEGG: mex:Mext_3986 porin YP_001753694.1 PFAM: PRC-barrel domain protein; KEGG: reu:Reut_C5914 PRC-barrel YP_001753695.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling YP_001753696.1 KEGG: mex:Mext_3120 hypothetical protein YP_001753697.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity YP_001753698.1 KEGG: syf:Synpcc7942_B2631 hypothetical protein YP_001753699.1 KEGG: rpd:RPD_1271 hypothetical protein YP_001753700.1 PFAM: oxidoreductase molybdopterin binding; KEGG: mex:Mext_3309 oxidoreductase molybdopterin binding YP_001753701.1 KEGG: mex:Mext_3310 putative transmembrane b-type cytochrome protein YP_001753702.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis YP_001753703.1 TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-ATP pyrophosphohydrolase; KEGG: mex:Mext_2553 phosphoribosyl-ATP diphosphatase YP_001753704.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis YP_001753705.1 TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: mex:Mext_3995 2'-5' RNA ligase YP_001753706.1 PFAM: lipolytic protein G-D-S-L family; KEGG: mex:Mext_3994 lipolytic protein G-D-S-L family YP_001753707.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_3993 ABC transporter related YP_001753708.1 PFAM: protein of unknown function DUF214; KEGG: mex:Mext_2269 protein of unknown function DUF214 YP_001753710.1 PFAM: PAS fold-3 domain protein; SMART: PAC repeat-containing protein; KEGG: ccr:CC_0836 sensor histidine kinase, putative YP_001753711.1 PFAM: protein of unknown function UPF0005; KEGG: mex:Mext_2268 protein of unknown function UPF0005 YP_001753712.1 PFAM: dihydrodipicolinate synthetase; KEGG: mex:Mext_0696 dihydrodipicolinate synthetase YP_001753713.1 KEGG: mex:Mext_2004 hypothetical protein YP_001753714.1 KEGG: mex:Mext_2003 cob(II)yrinic acid a,c-diamide reductase; TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: nitroreductase YP_001753715.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2002 ErfK/YbiS/YcfS/YnhG family protein YP_001753716.1 PFAM: protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein; KEGG: mxa:MXAN_5309 hypothetical protein YP_001753717.1 transports degraded pectin products into the bacterial cell YP_001753718.1 PFAM: protein of unknown function DUF1674; KEGG: mex:Mext_0550 protein of unknown function DUF1674 YP_001753719.1 PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: mex:Mext_0551 Fmu (Sun) domain protein YP_001753720.1 KEGG: mex:Mext_4740 phosphatidylserine decarboxylase related protein; TIGRFAM: phosphatidylserine decarboxylase related protein; PFAM: phosphatidylserine decarboxylase-related YP_001753721.1 KEGG: mex:Mext_4739 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_001753722.1 TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: mex:Mext_2579 large conductance mechanosensitive channel protein YP_001753723.1 KEGG: mex:Mext_2580 hypothetical protein YP_001753724.1 PFAM: protein of unknown function DUF1236; KEGG: mex:Mext_2581 protein of unknown function DUF1236 YP_001753725.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mex:Mext_4462 RNA polymerase sigma factor, sigma-70 family YP_001753726.1 PFAM: glutamine amidotransferase class-II; KEGG: mex:Mext_4461 glutamine amidotransferase class-II YP_001753727.1 KEGG: nha:Nham_4177 Caa(3)-type oxidase, subunit IV YP_001753728.1 PFAM: cytochrome c oxidase subunit III; KEGG: aba:Acid345_2994 cytochrome c oxidase, subunit III YP_001753729.1 KEGG: cau:Caur_2142 cytochrome c oxidase, subunit I; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I YP_001753730.1 TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; KEGG: aba:Acid345_2996 cytochrome c oxidase, subunit II YP_001753731.1 KEGG: sus:Acid_0495 hypothetical protein YP_001753732.1 KEGG: mex:Mext_4460 hypothetical protein YP_001753733.1 KEGG: mex:Mext_0219 hypothetical protein YP_001753734.1 PFAM: Polysulphide reductase NrfD; KEGG: sus:Acid_0491 polysulphide reductase, NrfD YP_001753735.1 KEGG: noc:Noc_1238 molybdopterin oxidoreductase, iron-sulfur binding subunit YP_001753736.1 KEGG: mex:Mext_0215 chaperone protein HtpG YP_001753737.1 KEGG: mex:Mext_4458 ABC-type multidrug transport system ATPase and permease components-like protein YP_001753738.1 PFAM: protein of unknown function DUF949; KEGG: mex:Mext_4457 protein of unknown function DUF949 YP_001753739.1 PFAM: beta-lactamase domain protein; KEGG: mex:Mext_4456 beta-lactamase domain protein YP_001753741.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: mex:Mext_1007 NADH dehydrogenase YP_001753742.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: azc:AZC_0053 GDP-6-deoxy-D-lyxo-4-hexulose reductase YP_001753743.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: gbe:GbCGDNIH1_1775 methyltransferase YP_001753744.1 PFAM: protein of unknown function UPF0074; Helix-turn-helix type 11 domain protein; KEGG: gbe:GbCGDNIH1_1774 rrf2 family protein YP_001753745.1 PFAM: protein of unknown function DUF1696; KEGG: mes:Meso_1246 protein of unknown function DUF1696 YP_001753746.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: azc:AZC_2864 putative acyl-CoA transferase YP_001753747.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: azc:AZC_2865 transcriptional regulator YP_001753748.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: azc:AZC_2866 enoyl-CoA hydratase YP_001753749.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: azc:AZC_2867 2-nitropropane dioxygenase YP_001753750.1 PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: azc:AZC_2873 enoyl-CoA hydratase YP_001753751.1 KEGG: azc:AZC_2875 thiolase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase YP_001753752.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: azc:AZC_2876 putative acyl-CoA dehydrogenase YP_001753753.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: azc:AZC_2877 putative acyl-CoA dehydrogenase YP_001753754.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mex:Mext_1964 tetratricopeptide TPR_2 repeat protein YP_001753755.1 KEGG: mex:Mext_1963 phosphoribosylaminoimidazole carboxylase, ATPase subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp YP_001753756.1 KEGG: mex:Mext_1962 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_001753757.1 PFAM: protein of unknown function DUF465; KEGG: mex:Mext_1960 protein of unknown function DUF465 YP_001753758.1 PFAM: protein of unknown function DUF465; KEGG: mex:Mext_1959 protein of unknown function DUF465 YP_001753759.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mex:Mext_1958 AMP-dependent synthetase and ligase YP_001753760.1 KEGG: mex:Mext_0047 hypothetical protein YP_001753761.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: mex:Mext_2248 NADH:flavin oxidoreductase/NADH oxidase YP_001753762.1 KEGG: mex:Mext_2247 hypothetical protein YP_001753763.1 KEGG: mex:Mext_2246 hypothetical protein YP_001753764.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: azc:AZC_3224 putative 4-methylmuconolactone transporter YP_001753765.1 PFAM: amidohydrolase 2; KEGG: azc:AZC_3225 putative 2-pyrone-4,6-dicarboxylate hydrolase YP_001753767.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: reh:H16_B2067 MFS transporter, MHS family YP_001753768.1 PFAM: PGAP1 family protein; KEGG: mex:Mext_1008 hypothetical protein YP_001753769.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: smd:Smed_3161 transcriptional regulator, XRE family YP_001753770.1 catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate YP_001753771.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: mex:Mext_3957 NAD-dependent epimerase/dehydratase YP_001753772.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine YP_001753773.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bra:BRADO4494 putative transcriptional regulatory protein, LysR family YP_001753774.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: mul:MUL_1961 hypothetical protein YP_001753775.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2795 ErfK/YbiS/YcfS/YnhG family protein YP_001753776.1 PFAM: Glutathione S-transferase domain; KEGG: nmu:Nmul_A2242 glutathione S-transferase-like YP_001753777.1 KEGG: gbe:GbCGDNIH1_1407 hypothetical protein YP_001753778.1 KEGG: mex:Mext_2673 hypothetical protein YP_001753779.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mlo:mlr7815 transcriptional regulator YP_001753780.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: rru:Rru_A1713 NAD(P)H dehydrogenase (quinone) YP_001753781.1 TIGRFAM: formate dehydrogenase accessory protein FdhE; PFAM: formate dehydrogenase accessory protein; KEGG: xau:Xaut_0659 formate dehydrogenase accessory protein FdhE YP_001753782.1 TIGRFAM: formate dehydrogenase, gamma subunit; PFAM: cytochrome B561; KEGG: oan:Oant_2865 formate dehydrogenase, gamma subunit YP_001753783.1 TIGRFAM: formate dehydrogenase, beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Formate dehydrogenase transmembrane domain protein; KEGG: oan:Oant_2864 formate dehydrogenase, beta subunit YP_001753784.1 KEGG: xau:Xaut_0662 formate dehydrogenase, alpha subunit; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region YP_001753785.1 PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: azc:AZC_1160 twin-arginine translocation pathway signal precursor YP_001753786.1 KEGG: scl:sce1320 putative secreted protein YP_001753787.1 KEGG: mex:Mext_1389 hypothetical protein YP_001753788.1 TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: mex:Mext_0581 sulfate ABC transporter, periplasmic sulfate-binding protein YP_001753789.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_0582 sulfate ABC transporter, inner membrane subunit CysT YP_001753790.1 TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_0583 sulfate ABC transporter, inner membrane subunit CysW YP_001753791.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_0584 sulfate ABC transporter, ATPase subunit YP_001753792.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: mex:Mext_1391 pyridoxal-5'-phosphate-dependent protein beta subunit YP_001753793.1 KEGG: mex:Mext_1392 hypothetical protein YP_001753794.1 KEGG: mex:Mext_1393 peptidoglycan-binding domain 1 protein YP_001753795.1 KEGG: mex:Mext_0295 hypothetical protein YP_001753796.1 PFAM: PhnA protein; KEGG: mex:Mext_1993 PhnA protein YP_001753797.1 TIGRFAM: crotonyl-CoA reductase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_0288 crotonyl-CoA reductase YP_001753798.1 KEGG: mex:Mext_0290 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein YP_001753799.1 PFAM: transposase IS4 family protein; KEGG: rxy:Rxyl_2506 transposase, IS4 YP_001753800.1 KEGG: sco:SCP1.214 putative transposase YP_001753801.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_4068 chemotaxis sensory transducer YP_001753802.1 PFAM: glycosyl transferase family 4; KEGG: mex:Mext_2033 glycosyl transferase family 4 YP_001753803.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KR domain protein; KEGG: mex:Mext_2034 NAD-dependent epimerase/dehydratase YP_001753804.1 catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate YP_001753805.1 PFAM: Phosphoglycerate mutase; KEGG: mex:Mext_4627 phosphoglycerate mutase YP_001753806.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_4557 alpha/beta hydrolase fold YP_001753807.1 PFAM: heat shock protein Hsp20; KEGG: mex:Mext_4556 heat shock protein HSP20 YP_001753808.1 KEGG: mex:Mext_4417 hypothetical protein YP_001753809.1 KEGG: mex:Mext_4553 hypothetical protein YP_001753810.1 KEGG: mex:Mext_4552 hypothetical protein YP_001753811.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: mex:Mext_2638 antibiotic biosynthesis monooxygenase YP_001753812.1 PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: mex:Mext_1395 alpha-2-macroglobulin domain protein YP_001753813.1 PFAM: MscS Mechanosensitive ion channel; KEGG: mex:Mext_3654 MscS mechanosensitive ion channel YP_001753814.1 TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: mex:Mext_1640 radical SAM enzyme, Cfr family YP_001753815.1 PFAM: Methyltransferase type 12; KEGG: hch:HCH_04217 SAM-dependent methyltransferase YP_001753816.1 TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: mex:Mext_0013 glutaredoxin-like protein YP_001753817.1 PFAM: protein of unknown function DUF29; KEGG: rru:Rru_A3208 protein of unknown function DUF29 YP_001753818.1 PFAM: BolA family protein; KEGG: mex:Mext_0012 BolA family protein YP_001753819.1 KEGG: mex:Mext_0011 phosphoribosylformylglycinamidine synthase II; TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_001753820.1 KEGG: mex:Mext_0006 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; ATP-dependent DNA helicase RecQ; PFAM: helicase domain protein; HRDC domain protein; DEAD/DEAH box helicase domain protein; Helicase superfamily 1 and 2 ATP-binding; SMART: DEAD-like helicases YP_001753821.1 PFAM: Rv0623 family protein transcription factor; KEGG: mex:Mext_0005 Rv0623 family protein transcription factor YP_001753822.1 PFAM: PilT protein domain protein; KEGG: mex:Mext_0004 PilT protein domain protein YP_001753823.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: xau:Xaut_1995 NAD-dependent epimerase/dehydratase YP_001753824.1 PFAM: type III effector Hrp-dependent outers; KEGG: bja:blr2930 hypothetical protein YP_001753825.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: xau:Xaut_1026 hydroxypyruvate isomerase YP_001753826.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: xau:Xaut_3451 3-hydroxyisobutyrate dehydrogenase YP_001753827.1 PFAM: major facilitator superfamily MFS_1; KEGG: xau:Xaut_1028 major facilitator superfamily MFS_1 YP_001753828.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: xau:Xaut_1029 periplasmic binding protein/LacI transcriptional regulator YP_001753829.1 PFAM: class II aldolase/adducin family protein; KEGG: smd:Smed_4323 class II aldolase/adducin family protein YP_001753830.1 KEGG: mex:Mext_3096 glycyl-tRNA synthetase, beta subunit; TIGRFAM: glycyl-tRNA synthetase, beta subunit YP_001753831.1 KEGG: mex:Mext_3098 hypothetical protein YP_001753832.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA YP_001753833.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pae:PA5432 probable acetyltransferase YP_001753834.1 KEGG: mex:Mext_3101 hypothetical protein YP_001753835.1 TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; KEGG: bpm:BURPS1710b_A0975 Na+/H+ antiporter YP_001753836.1 PFAM: protein of unknown function DUF1052; KEGG: mex:Mext_2667 protein of unknown function DUF1052 YP_001753837.1 PFAM: periplasmic binding protein; KEGG: mex:Mext_2668 periplasmic binding protein YP_001753838.1 PFAM: SNARE associated Golgi protein; KEGG: mex:Mext_2669 hypothetical protein YP_001753839.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal YP_001753840.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: mex:Mext_2671 phenazine biosynthesis protein PhzF family YP_001753841.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_2672 NUDIX hydrolase YP_001753842.1 KEGG: bja:blr6456 probable aliphatic sulfonates binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; SMART: extracellular solute-binding protein family 3 YP_001753843.1 KEGG: mex:Mext_3138 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_001753845.1 TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: maq:Maqu_0180 protein of unknown function DUF796 YP_001753847.1 TIGRFAM: type VI secretion system Vgr family protein; PFAM: Rhs element Vgr protein; KEGG: eca:ECA4276 Rhs-family protein YP_001753848.1 KEGG: hau:Haur_3851 protein of unknown function DUF909 YP_001753849.1 PFAM: PAAR repeat-containing protein; KEGG: eca:ECA1669 hypothetical protein YP_001753851.1 KEGG: scl:sce8421 hypothetical protein YP_001753852.1 KEGG: scl:sce8420 hypothetical protein YP_001753853.1 KEGG: scl:sce8419 hypothetical protein YP_001753854.1 KEGG: gvi:gll3016 unknown protein YP_001753855.1 KEGG: yps:YPTB3615 hypothetical protein YP_001753856.1 PFAM: Integrase catalytic region; KEGG: gdi:GDI2860 putative integrase YP_001753858.1 KEGG: sen:SACE_0653 hypothetical protein YP_001753859.1 KEGG: gdi:GDI2555 hypothetical protein YP_001753860.1 KEGG: mex:Mext_4377 hypothetical protein YP_001753862.1 PFAM: cytochrome c class I; KEGG: mex:Mext_0924 cytochrome c class I YP_001753866.1 TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; KEGG: azo:azo3189 NDP sugar dehydrogenase YP_001753867.1 PFAM: CoA-binding domain protein; KEGG: mex:Mext_2489 CoA-binding domain protein YP_001753868.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit YP_001753869.1 forms a direct contact with the tRNA during translation YP_001753870.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis YP_001753872.1 KEGG: dps:DP0018 hypothetical protein YP_001753873.1 KEGG: nar:Saro_3112 lipolytic enzyme, G-D-S-L YP_001753874.1 PFAM: glycosyl transferase family 2; KEGG: mtc:MT1570 glycosyl transferase YP_001753875.1 KEGG: mex:Mext_3709 hypothetical protein YP_001753876.1 KEGG: mex:Mext_4503 SNARE associated Golgi protein YP_001753877.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: nmu:Nmul_A2404 NAD-dependent epimerase/dehydratase YP_001753878.1 KEGG: mex:Mext_1402 hypothetical protein YP_001753879.1 KEGG: dol:Dole_1287 capsular polysaccharide biosynthesis protein-like protein YP_001753880.1 PFAM: WxcM domain protein; KEGG: tel:tlr1343 hypothetical protein YP_001753881.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: tel:tlr1344 probable aminotransferase YP_001753882.1 KEGG: hhe:HH0094 hypothetical protein YP_001753883.1 KEGG: cbe:Cbei_2590 capsular polysaccharide biosynthesis -like protein YP_001753884.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: ajs:Ajs_0551 DegT/DnrJ/EryC1/StrS aminotransferase YP_001753885.1 KEGG: sdn:Sden_2647 putative acetyltransferase YP_001753886.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: psp:PSPPH_3425 gluconate 5-dehydrogenase, putative YP_001753888.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: bpd:BURPS668_3877 3-oxoacyl-(acyl-carrier-protein) synthase III YP_001753890.1 TIGRFAM: HAD-superfamily phosphatase, subfamily IIIC; FkbH like protein; KEGG: pdi:BDI_3637 hypothetical protein YP_001753891.1 PFAM: short-chain dehydrogenase/reductase SDR; MaoC domain protein dehydratase; KEGG: sus:Acid_4810 MaoC domain protein dehydratase YP_001753892.1 KEGG: mex:Mext_4523 hypothetical protein YP_001753893.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: vco:VC0395_A2618 transferase, hexapeptide repeat family YP_001753894.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_2218 glycosyl transferase family 2 YP_001753895.1 PFAM: ABC-2 type transporter; KEGG: mex:Mext_2467 ABC-2 type transporter YP_001753897.1 KEGG: sil:SPO1725 hypothetical protein YP_001753899.1 KEGG: mex:Mext_0830 hypothetical protein YP_001753900.1 PFAM: glycosyl transferase family 2; glycosyl transferase group 1; KEGG: mex:Mext_0831 glycosyl transferase family 2 YP_001753901.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_0832 hypothetical protein YP_001753902.1 KEGG: mex:Mext_0833 hypothetical protein YP_001753903.1 PFAM: Methyltransferase type 11; KEGG: rxy:Rxyl_3095 glycosyl transferase, family 2 YP_001753905.1 KEGG: rru:Rru_B0007 glycosyl transferase, group 1 YP_001753906.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: pol:Bpro_4000 NAD-dependent epimerase/dehydratase YP_001753907.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: tel:tll0633 GDP-fucose synthetase YP_001753908.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; Methyltransferase domain protein; C-methyltransferase; KEGG: syn:slr1763 hypothetical protein YP_001753909.1 PFAM: NUDIX hydrolase; KEGG: ccr:CC_3650 MutT/NUDIX family protein YP_001753911.1 TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Nucleotidyl transferase; KEGG: bja:blr5988 hypothetical protein YP_001753912.1 catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate YP_001753913.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mgm:Mmc1_0618 NAD-dependent epimerase/dehydratase YP_001753914.1 PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: mgm:Mmc1_0617 GHMP kinase YP_001753915.1 SMART: helix-turn-helix domain protein; KEGG: rle:pRL110239 hypothetical protein YP_001753917.1 SMART: HNH nuclease; KEGG: sit:TM1040_1690 HNH nuclease YP_001753918.1 KEGG: sus:Acid_6279 hypothetical protein YP_001753919.1 PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: mlo:mll7567 nodulation protein NoeK, phosphomannomutase YP_001753920.1 KEGG: mex:Mext_4198 hypothetical protein YP_001753923.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: gdi:GDI1513 putative heavy-metal ion transporter YP_001753924.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mmr:Mmar10_2338 efflux transporter, RND family, MFP subunit YP_001753925.1 KEGG: aav:Aave_1597 polyhydroxyalkonate synthesis repressor, PhaR YP_001753926.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bja:bll0304 two-component response regulator YP_001753927.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mlo:mll5777 two-component sensor YP_001753928.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mex:Mext_2492 diguanylate cyclase YP_001753929.1 PFAM: type IV pilus assembly PilZ; KEGG: bja:bsl0098 hypothetical protein YP_001753930.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bja:bll3290 transcriptional regulatory protein YP_001753931.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: bja:blr3294 putative decarboxylase YP_001753932.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: azc:AZC_1972 ABC transporter ATP-binding protein YP_001753933.1 PFAM: extracellular solute-binding protein family 1; KEGG: bja:bll3286 ABC transporter substrate-binding protein YP_001753934.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_1970 ABC transporter permease protein 2 YP_001753935.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll3284 ABC transporter permease protein YP_001753936.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: reh:H16_A3073 hydantoin racemase YP_001753937.1 PFAM: Amidase; KEGG: azc:AZC_3204 putative glutamyl-tRNA(Gln) amidotransferase subunit YP_001753938.1 PFAM: Transthyretin; KEGG: bja:blr3283 hypothetical transthyretin-like protein YP_001753939.1 KEGG: rpb:RPB_0491 hypothetical protein YP_001753940.1 KEGG: gdi:GDI3551 hypothetical protein YP_001753941.1 KEGG: sco:SCO5419 putative thioredoxin YP_001753942.1 PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_2382 glycosyl transferase, family 2 YP_001753943.1 TIGRFAM: CDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: bpd:BURPS668_A0663 CDP-glucose 4,6-dehydratase YP_001753944.1 TIGRFAM: glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: spt:SPA0774 glucose-1-phosphate cytidylyltransferase YP_001753945.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: yen:YE3084 paratose synthase YP_001753946.1 PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; KEGG: cth:Cthe_2560 dTDP-4-dehydrorhamnose 3,5-epimerase YP_001753947.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: cvi:CV_3891 CDP-6-deoxy-D-xylo-4-hexulose-3-dehydrase YP_001753950.1 KEGG: mex:Mext_1866 hypothetical protein YP_001753951.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: azc:AZC_3923 response regulator receiver YP_001753952.1 PFAM: response regulator receiver; KEGG: azc:AZC_1362 two-component response regulator YP_001753953.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: azc:AZC_1361 high similarity to two-component response regulator YP_001753954.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; General substrate transporter; major facilitator superfamily MFS_1; PAS fold-3 domain protein; KEGG: neu:NE0100 general substrate transporters YP_001753955.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: scl:sce2324 dihydrolipoyl dehydrogenase YP_001753956.1 PFAM: protein of unknown function DUF417; KEGG: spq:SPAB_02993 hypothetical protein YP_001753957.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mex:Mext_0210 (2Fe-2S)-binding domain protein YP_001753958.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mex:Mext_0211 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_001753959.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: bja:blr0279 two-component hybrid sensor and regulator YP_001753960.1 PFAM: short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: bch:Bcen2424_4305 short-chain dehydrogenase/reductase SDR YP_001753961.1 KEGG: mex:Mext_0360 hypothetical protein YP_001753962.1 KEGG: mex:Mext_0359 hypothetical protein YP_001753964.1 KEGG: mex:Mext_2630 hypothetical protein YP_001753966.1 KEGG: rpa:RPA4503 hypothetical protein YP_001753968.1 KEGG: rpc:RPC_3683 hypothetical protein YP_001753969.1 KEGG: mgr:MGG_08078 hypothetical protein YP_001753971.1 KEGG: mex:Mext_4443 porin YP_001753972.1 KEGG: bra:BRADO5932 conserved hypothetical protein; putative signal peptide YP_001753975.1 KEGG: mex:Mext_4443 porin YP_001753977.1 PFAM: regulatory protein LuxR; KEGG: mex:Mext_1977 regulatory protein LuxR YP_001753978.1 PFAM: protein of unknown function DUF606; KEGG: mex:Mext_4213 protein of unknown function DUF606 YP_001753979.1 SMART: extracellular solute-binding protein family 3; KEGG: bja:bll6724 hypothetical protein YP_001753980.1 PFAM: acyltransferase 3; KEGG: psa:PST_4158 sugar acetylase YP_001753981.1 KEGG: cau:Caur_3728 hypothetical protein YP_001753982.1 KEGG: mex:Mext_1552 protein of unknown function DUF1469 YP_001753983.1 PFAM: histidine kinase HAMP region domain protein; HWE histidine kinase; KEGG: ret:RHE_PF00079 putative two-component sensor histidine kinase protein YP_001753984.1 KEGG: mex:Mext_2911 hypothetical protein YP_001753985.1 PFAM: major facilitator superfamily MFS_1; KEGG: pde:Pden_1498 major facilitator superfamily MFS_1 YP_001753986.1 KEGG: smd:Smed_2193 ferric iron reductase YP_001753987.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_2001 ABC transporter related YP_001753988.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: ppu:PP_2457 ribose operon repressor YP_001753989.1 KEGG: mex:Mext_3766 hypothetical protein YP_001753992.1 KEGG: mex:Mext_0240 hypothetical protein YP_001753993.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mex:Mext_0241 methyltransferase type 11 YP_001753994.1 PFAM: Phosphoglycerate mutase; KEGG: mex:Mext_0502 phosphoglycerate mutase YP_001753995.1 PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase GAPDH domain protein; KEGG: mex:Mext_0503 myo-inositol-1-phosphate synthase YP_001753996.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_0504 NAD-dependent epimerase/dehydratase YP_001753997.1 KEGG: mex:Mext_0505 hypothetical protein YP_001753998.1 KEGG: mex:Mext_0246 hypothetical protein YP_001753999.1 KEGG: mex:Mext_0507 hypothetical protein YP_001754000.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_0508 glycosyl transferase group 1 YP_001754001.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mex:Mext_0249 radical SAM domain protein YP_001754002.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KR domain protein; KEGG: mex:Mext_0510 NAD-dependent epimerase/dehydratase YP_001754003.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; Male sterility domain; KR domain protein; KEGG: mex:Mext_0511 NAD-dependent epimerase/dehydratase YP_001754004.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: mxa:MXAN_3250 senescence marker protein-30 family protein YP_001754005.1 TIGRFAM: glucose/galactose transporter; PFAM: major facilitator superfamily MFS_1; KEGG: sus:Acid_7391 glucose/galactose transporter YP_001754006.1 PFAM: Aldose 1-epimerase; KEGG: ccr:CC_1418 aldose 1-epimerase YP_001754007.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate YP_001754008.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: ccr:CC_1420 transcriptional regulator, GntR family YP_001754009.1 KEGG: bpd:BURPS668_A0566 aldehyde dehydrogenase family protein YP_001754010.1 PFAM: protein of unknown function DUF1238; KEGG: oan:Oant_1419 protein of unknown function DUF1238 YP_001754011.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ret:RHE_CH01458 D-galactose-1-dehydrogenase protein YP_001754012.1 PFAM: Carbohydrate-selective porin OprB; KEGG: gbe:GbCGDNIH1_0408 porin YP_001754013.1 KEGG: mlo:mlr9679 circadian oscillation regulator KaiC homolog; PFAM: KaiA binding; SMART: AAA ATPase YP_001754014.1 PFAM: HWE histidine kinase; KEGG: mlo:mlr8083 two-component, sensor histidine kinase YP_001754016.1 PFAM: NADPH-dependent FMN reductase; KEGG: mex:Mext_3404 NADPH-dependent FMN reductase YP_001754017.1 KEGG: mex:Mext_3405 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3 YP_001754018.1 KEGG: bbt:BBta_2507 putative ABC transporter, substrate binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3 YP_001754019.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_3406 binding-protein-dependent transport systems inner membrane component YP_001754020.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_3407 ABC transporter related YP_001754021.1 PFAM: Luciferase-like monooxygenase; KEGG: mex:Mext_3408 alkanesulfonate monooxygenase YP_001754022.1 KEGG: mex:Mext_3072 conserved hypothetical protein; putative exported protein YP_001754023.1 PFAM: cyclic nucleotide-binding; Sulfate transporter/antisigma-factor antagonist STAS; sulphate transporter; KEGG: mag:amb3535 sulfate permease and related transporters YP_001754024.1 KEGG: rpb:RPB_1694 hypothetical protein YP_001754025.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: ret:RHE_PF00460 efflux transporter inner membrane protein YP_001754026.1 KEGG: bbt:BBta_1093 L-ornithine 5-monooxygenase (L-ornithine N5-oxygenase) YP_001754027.1 KEGG: xau:Xaut_2789 hypothetical protein YP_001754028.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; KEGG: azc:AZC_3246 vicibactin biosynthesis non-ribosomal peptide synthase protein YP_001754029.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sen:SACE_3727 acetyltransferase, GNAT family YP_001754031.1 KEGG: saq:Sare_0852 lipolytic protein G-D-S-L family YP_001754032.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: xau:Xaut_4664 short-chain dehydrogenase/reductase SDR YP_001754034.1 PFAM: Propeptide PepSY amd peptidase M4; KEGG: mex:Mext_3968 propeptide PepSY amd peptidase M4 YP_001754035.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: rpd:RPD_0914 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding YP_001754036.1 PFAM: aldo/keto reductase; KEGG: ava:Ava_0681 twin-arginine translocation pathway signal YP_001754037.1 KEGG: syg:sync_0783 putative circadian phase modifier CpmA homolog YP_001754038.1 KEGG: cyb:CYB_1309 conserved hypothetical protein TIGR00268 YP_001754039.1 PFAM: protein of unknown function DUF111; KEGG: aba:Acid345_2031 protein of unknown function DUF111 YP_001754040.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mex:Mext_2763 cyclic nucleotide-binding YP_001754041.1 PFAM: ribonuclease BN; KEGG: mex:Mext_2469 ribonuclease BN YP_001754042.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_1019 short-chain dehydrogenase/reductase SDR YP_001754043.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mex:Mext_4870 RNA polymerase sigma factor, sigma-70 family YP_001754044.1 KEGG: nwi:Nwi_2772 hypothetical protein YP_001754046.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_3216 metallophosphoesterase YP_001754047.1 SMART: HhH-GPD family protein; KEGG: mex:Mext_0188 HhH-GPD family protein YP_001754048.1 PFAM: helix-turn-helix HxlR type; KEGG: mex:Mext_2036 helix-turn-helix HxlR type YP_001754049.1 PFAM: DoxX family protein; KEGG: mex:Mext_1676 DoxX family protein YP_001754051.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: tfu:Tfu_3031 similar to coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductase YP_001754053.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_0395 regulatory protein TetR YP_001754054.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_0396 efflux transporter, RND family, MFP subunit YP_001754055.1 PFAM: acriflavin resistance protein; KEGG: mex:Mext_0397 acriflavin resistance protein YP_001754056.1 KEGG: rle:RL2883 hypothetical protein YP_001754057.1 TIGRFAM: arsenical resistance protein ArsH; PFAM: NADPH-dependent FMN reductase; KEGG: mex:Mext_1907 arsenical resistance protein ArsH YP_001754058.1 PFAM: regulatory protein ArsR; KEGG: mex:Mext_1908 regulatory protein ArsR YP_001754059.1 TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; KEGG: mex:Mext_1910 arsenate reductase YP_001754060.1 TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: mex:Mext_1911 arsenical pump membrane protein YP_001754061.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_1916 major facilitator superfamily MFS_1 YP_001754062.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_4367 amine oxidase YP_001754063.1 KEGG: scl:sce5216 transposase, probable YP_001754064.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mex:Mext_4777 adenylyl cyclase class-3/4/guanylyl cyclase YP_001754065.1 KEGG: mmu:100041567 similar to p47 protein YP_001754066.1 KEGG: pfl:PFL_2523 hypothetical protein YP_001754067.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); KEGG: hch:HCH_03958 retron-type reverse transcriptase YP_001754068.1 PFAM: zinc finger SWIM domain protein; KEGG: hch:HCH_03960 protein containing SWIM zinc finger domain YP_001754069.1 KEGG: hch:HCH_03961 probable DNA binding protein containing WGR domain YP_001754070.1 PFAM: zinc finger SWIM domain protein; KEGG: bur:Bcep18194_B1558 hypothetical protein YP_001754071.1 PFAM: VWA containing CoxE family protein; SMART: von Willebrand factor type A; KEGG: bur:Bcep18194_B1557 VWA containing CoxE-like protein YP_001754072.1 PFAM: WGR domain protein; KEGG: bur:Bcep18194_B1559 hypothetical protein YP_001754073.1 PFAM: WGR domain protein; KEGG: stp:Strop_2883 WGR domain protein YP_001754074.1 KEGG: stp:Strop_2881 hypothetical protein YP_001754075.1 PFAM: ATPase associated with various cellular activities AAA_5; KEGG: stp:Strop_2882 ATPase associated with various cellular activities, AAA_5 YP_001754077.1 KEGG: rso:RS03006 putative lipoprotein YP_001754080.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: bbt:BBta_3413 RND divalent metal cation efflux transporter CnrA YP_001754081.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: nha:Nham_1888 secretion protein HlyD YP_001754082.1 KEGG: saq:Sare_4665 putative transmembrane anti-sigma factor YP_001754083.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bbt:BBta_5602 putative transcriptional regulatory protein, AraC/XylS family YP_001754085.1 KEGG: mex:Mext_3920 hypothetical protein YP_001754086.1 KEGG: mex:Mext_0194 hypothetical protein YP_001754087.1 KEGG: azo:azo0615 putative TonB protein YP_001754088.1 KEGG: mex:Mext_1751 hypothetical protein YP_001754091.1 KEGG: mex:Mext_4176 hypothetical protein YP_001754093.1 KEGG: mex:Mext_4443 porin YP_001754094.1 KEGG: mex:Mext_4476 hypothetical protein YP_001754095.1 KEGG: mex:Mext_3911 hypothetical protein YP_001754096.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_1014 short-chain dehydrogenase/reductase SDR YP_001754097.1 KEGG: rpc:RPC_3392 hypothetical protein YP_001754099.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription YP_001754100.1 KEGG: rme:Rmet_0596 putative transmembrane transcriptional regulator (anti-sigma factor) YP_001754101.1 SMART: regulatory protein LuxR; KEGG: nar:Saro_3595 regulatory protein, LuxR YP_001754103.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: psa:PST_2871 alcohol dehydrogenase, zinc-containing YP_001754104.1 PFAM: amino acid-binding ACT domain protein; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: mex:Mext_0213 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_001754105.1 TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mex:Mext_1178 cysteine desulfurase, SufS subfamily YP_001754106.1 PFAM: cyclic nucleotide-binding; KEGG: mex:Mext_1177 cyclic nucleotide-binding YP_001754107.1 KEGG: mex:Mext_1176 serine O-acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: serine acetyltransferase domain protein YP_001754108.1 KEGG: mex:Mext_1175 hypothetical protein YP_001754110.1 KEGG: mex:Mext_3386 hypothetical protein YP_001754111.1 KEGG: mex:Mext_3630 hypothetical protein YP_001754112.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_pAT_775 putative branched-chain amino acid transport ATP-binding protein YP_001754113.1 KEGG: bra:BRADO3409 hypothetical protein; putative branched-chain amino acid ABC transporter, substrate-binding protein YP_001754114.1 PFAM: inner-membrane translocator; KEGG: bbt:BBta_4296 putative branched-chain amino acid ABC transporter, permease protein YP_001754115.1 PFAM: inner-membrane translocator; KEGG: bbt:BBta_4297 putative branched-chain amino acid ABC transporter, permease protein YP_001754116.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mlo:mlr5219 ABC transporter, ATP-binding protein YP_001754117.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mex:Mext_2763 cyclic nucleotide-binding YP_001754118.1 KEGG: mex:Mext_2764 HWE histidine kinase YP_001754119.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mex:Mext_2024 cyclic nucleotide-binding YP_001754121.1 KEGG: rpa:RPA3669 putative UreA short-chain amide or branched-chain amino acid uptake ABC transporter periplasmic solute-binding protein precursor YP_001754122.1 TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; KEGG: azc:AZC_1759 ABC transporter permease protein precursor YP_001754123.1 TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: xau:Xaut_4151 inner-membrane translocator YP_001754124.1 KEGG: mlo:mll0758 probable ATP-binding component of ABC transporter; TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; SMART: AAA ATPase YP_001754125.1 KEGG: dsh:Dshi_2699 ABC transporter related; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase YP_001754128.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pmy:Pmen_4041 integral membrane sensor hybrid histidine kinase YP_001754129.1 KEGG: xcb:XC_3876 hypothetical protein YP_001754130.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: pde:Pden_4349 two component transcriptional regulator, LuxR family YP_001754132.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: bra:BRADO4942 hypothetical protein; putative CbxX/CfqX family protein (N-term) and peptidase (C-term) YP_001754133.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: bra:BRADO4942 hypothetical protein; putative CbxX/CfqX family protein (N-term) and peptidase (C-term) YP_001754134.1 KEGG: rpc:RPC_2358 Sel1 YP_001754135.1 KEGG: pde:Pden_2462 peptidase C14, caspase catalytic subunit P20 YP_001754136.1 KEGG: nfa:nfa8070 hypothetical protein YP_001754137.1 KEGG: rpb:RPB_3069 hypothetical protein YP_001754138.1 KEGG: rpd:RPD_0476 OmpA/MotB YP_001754139.1 KEGG: rpd:RPD_0476 OmpA/MotB YP_001754140.1 KEGG: bch:Bcen2424_1787 hypothetical protein YP_001754141.1 KEGG: bch:Bcen2424_3361 hypothetical protein YP_001754143.1 KEGG: bbt:BBta_1108 putative exported protein of unknown function YP_001754144.1 KEGG: bbt:BBta_1109 hypothetical protein YP_001754145.1 KEGG: bbt:BBta_1110 putative membrane protein of unknown function YP_001754146.1 PFAM: FAD linked oxidase domain protein; KEGG: bbt:BBta_1111 putative FAD binding domain protein YP_001754147.1 PFAM: cobalbumin biosynthesis protein; KEGG: mex:Mext_1447 adenosylcobinamide-phosphate guanylyltransferase YP_001754148.1 KEGG: mex:Mext_1448 cob(I)alamin adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP YP_001754149.1 TIGRFAM: cobyric acid synthase CobQ; PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: mex:Mext_4723 cobyric acid synthase CobQ YP_001754150.1 PFAM: major facilitator superfamily MFS_1; KEGG: ccr:CC_2354 major facilitator family transporter YP_001754151.1 KEGG: mex:Mext_3044 hypothetical protein YP_001754152.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: azc:AZC_0758 D-isomer specific 2-hydroxyacid dehydrogenase YP_001754153.1 TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: mex:Mext_4724 cobalamin biosynthesis protein CobD YP_001754154.1 TIGRFAM: L-threonine-O-3-phosphate decarboxylase; PFAM: aminotransferase class I and II; KEGG: mex:Mext_4725 L-threonine-O-3-phosphate decarboxylase YP_001754155.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_4726 major facilitator superfamily MFS_1 YP_001754156.1 KEGG: mex:Mext_4727 hypothetical protein YP_001754157.1 PFAM: Malonyl-CoA decarboxylase; KEGG: mex:Mext_4728 malonyl-CoA decarboxylase YP_001754158.1 catalyzes the formation of malonyl-CoA from malonate and CoA YP_001754159.1 KEGG: mex:Mext_1554 hypothetical protein YP_001754160.1 KEGG: mex:Mext_1553 hypothetical protein YP_001754161.1 KEGG: mex:Mext_1552 protein of unknown function DUF1469 YP_001754162.1 KEGG: mex:Mext_1551 hypothetical protein YP_001754163.1 PFAM: glycosyl transferase family 20; KEGG: mex:Mext_1550 alpha,alpha-trehalose-phosphate synthase (UDP-forming) YP_001754164.1 KEGG: mex:Mext_1549 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_001754165.1 KEGG: mex:Mext_3875 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_001754166.1 KEGG: mex:Mext_3874 hypothetical protein YP_001754167.1 KEGG: mex:Mext_3950 hypothetical protein YP_001754169.1 KEGG: mex:Mext_2822 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001754170.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: mex:Mext_2823 sigma-54 factor interaction domain-containing protein YP_001754171.1 TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: mex:Mext_2824 RNA chaperone Hfq YP_001754172.1 TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: mex:Mext_2825 GTP-binding protein HflX YP_001754173.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: sme:SMc02285 putative adenylate cyclase transmembrane protein YP_001754174.1 TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: ppr:PBPRB0775 hypothetical ABC-type phosphate/phosphonate transport system, periplasmic component YP_001754175.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: maq:Maqu_1447 ABC transporter related YP_001754176.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: maq:Maqu_1448 binding-protein-dependent transport systems inner membrane component YP_001754177.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_1595 TonB-dependent siderophore receptor YP_001754178.1 KEGG: ang:An05g02280 hypothetical protein Pfam: PGAP1 Abhydrolase_1 YP_001754180.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mex:Mext_4171 AMP-dependent synthetase and ligase YP_001754181.1 PFAM: PAS fold-3 domain protein; KEGG: mex:Mext_3387 hypothetical protein YP_001754182.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: mex:Mext_3388 cobyrinic acid ac-diamide synthase YP_001754183.1 KEGG: mex:Mext_3389 hypothetical protein YP_001754184.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: mex:Mext_3390 rare lipoprotein A YP_001754185.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: mex:Mext_2917 serine-type D-Ala-D-Ala carboxypeptidase YP_001754186.1 PFAM: thymidylate kinase; KEGG: mex:Mext_4191 dTMP kinase YP_001754187.1 KEGG: mex:Mext_4190 DNA-directed DNA polymerase YP_001754188.1 PFAM: regulatory protein MarR; KEGG: mex:Mext_1446 regulatory protein MarR YP_001754189.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: bra:BRADO6922 putative monooxygenase, FAD binding (hydroxylase) YP_001754190.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: swi:Swit_0986 helix-turn-helix-domain containing protein, AraC type YP_001754191.1 KEGG: scl:sce5470 protein kinase YP_001754192.1 TIGRFAM: methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); KEGG: mex:Mext_4187 methionyl-tRNA synthetase YP_001754193.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: mex:Mext_4186 hydrolase, TatD family YP_001754194.1 PFAM: beta-lactamase domain protein; KEGG: mex:Mext_4185 beta-lactamase-like protein YP_001754195.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_4474 ROSMUCR transcriptional regulator YP_001754196.1 KEGG: mex:Mext_2221 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_001754197.1 PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mex:Mext_0275 AAA ATPase central domain protein YP_001754198.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: azc:AZC_0266 transcriptional regulatory protein YP_001754199.1 catalyzes conversion of 1-aminocyclopropane-1-carboxylate to ammonia and alpha-ketobutyrate YP_001754200.1 KEGG: spe:Spro_1057 gamma-glutamyltransferase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_001754201.1 KEGG: mex:Mext_3871 phosphoribosylamine--glycine ligase; TIGRFAM: phosphoribosylamine--glycine ligase; PFAM: phosphoribosylglycinamide synthetase YP_001754203.1 KEGG: bld:BLi03580 OxdC; TIGRFAM: bicupin, oxalate decarboxylase family; PFAM: Cupin domain protein; Cupin 2 conserved barrel domain protein YP_001754204.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_3855 efflux transporter, RND family, MFP subunit YP_001754205.1 TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; PFAM: Pyrrolo-quinoline quinone; KEGG: psb:Psyr_2574 quinoprotein YP_001754206.1 PFAM: dihydrodipicolinate synthetase; KEGG: mes:Meso_3139 dihydrodipicolinate synthetase YP_001754207.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mex:Mext_2815 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_001754208.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: bja:blr2218 putative xanthine dehydrogenase YP_001754209.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mex:Mext_2813 (2Fe-2S)-binding domain protein YP_001754210.1 KEGG: rde:RD1_2467 hypothetical protein YP_001754212.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; KEGG: mex:Mext_4526 histidine kinase dimerisation/phosphoacceptor YP_001754213.1 KEGG: syw:SYNW0416 possible glycosyltransferase YP_001754214.1 KEGG: atc:AGR_C_2981 hypothetical protein YP_001754215.1 PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mex:Mext_2821 helicase domain protein YP_001754216.1 catalyzes the formation of precorrin 6x from precorrin 5 YP_001754217.1 PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: eca:ECA2039 putative ornithine cyclodeaminase YP_001754218.1 PFAM: alanine racemase domain protein; KEGG: cps:CPS_4887 putative threonine aldolase YP_001754219.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: aav:Aave_0152 pyridoxal-5'-phosphate-dependent enzyme, beta subunit YP_001754220.1 catalyzes the oxidative deamination of D-amino acids YP_001754221.1 KEGG: azc:AZC_2612 ethyl tert-butyl ether degradation protein YP_001754223.1 PFAM: Glutathione S-transferase domain; KEGG: sil:SPO0270 glutathione S-transferase family protein YP_001754224.1 PFAM: DoxX family protein; KEGG: acr:Acry_3130 DoxX family protein YP_001754225.1 KEGG: ana:all2289 glucosyltransferase YP_001754226.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine YP_001754228.1 KEGG: azc:AZC_3762 esterase YP_001754229.1 PFAM: HWE histidine kinase; KEGG: hch:HCH_02371 FOG: GGDEF domain YP_001754230.1 KEGG: mex:Mext_2828 hypothetical protein YP_001754231.1 PFAM: carbonic anhydrase; KEGG: mex:Mext_2827 carbonate dehydratase YP_001754232.1 PFAM: Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: mex:Mext_2826 sulphate transporter YP_001754233.1 KEGG: hsa:1028 cyclin-dependent kinase inhibitor 1C (p57, Kip2) YP_001754235.1 KEGG: mex:Mext_3915 hypothetical protein YP_001754236.1 PFAM: plasmid encoded RepA protein; KEGG: mex:Mext_3914 plasmid encoded RepA protein YP_001754237.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: mex:Mext_0183 RNA methyltransferase, TrmH family, group 3 YP_001754239.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: har:HEAR0090 putative transporter YP_001754240.1 PFAM: amidohydrolase 2; KEGG: mpt:Mpe_A0928 hypothetical protein YP_001754241.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Nitrate and nitrite sensing domain protein; KEGG: mex:Mext_3893 nitrate and nitrite sensing domain protein YP_001754242.1 PFAM: helix-turn-helix HxlR type; KEGG: mlo:mll7749 hypothetical protein YP_001754243.1 TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_1687 zinc-binding alcohol dehydrogenase family protein YP_001754244.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: mex:Mext_1685 cupin 2 conserved barrel domain protein YP_001754245.1 PFAM: major facilitator superfamily MFS_1; KEGG: psb:Psyr_3360 major facilitator superfamily YP_001754246.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: mex:Mext_3891 excinuclease ABC, A subunit YP_001754247.1 KEGG: mex:Mext_3890 hypothetical protein YP_001754248.1 PFAM: PDZ/DHR/GLGF domain protein; KEGG: mex:Mext_3887 PDZ/DHR/GLGF domain protein YP_001754249.1 KEGG: mex:Mext_3039 hypothetical protein YP_001754250.1 PFAM: protein of unknown function DUF1127; KEGG: mlo:msr1062 hypothetical protein YP_001754251.1 TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine YP_001754252.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide YP_001754253.1 KEGG: dsh:Dshi_4149 transferase hexapeptide repeat containing protein YP_001754254.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_2218 glycosyl transferase family 2 YP_001754255.1 PFAM: transcriptional regulator PadR family protein; KEGG: rru:Rru_A3441 transcriptional regulator, PadR-like family YP_001754256.1 KEGG: mex:Mext_3302 rhamnosyltransferase YP_001754257.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_3301 glycosyl transferase family 2 YP_001754258.1 KEGG: acr:Acry_2418 membrane protein-like protein YP_001754259.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_1735 alpha/beta hydrolase fold YP_001754260.1 PFAM: Endoribonuclease L-PSP; KEGG: mex:Mext_1736 endoribonuclease L-PSP YP_001754261.1 PFAM: isochorismatase hydrolase; KEGG: mex:Mext_1737 isochorismatase hydrolase YP_001754262.1 KEGG: mex:Mext_1738 luciferase family protein YP_001754264.1 KEGG: mex:Mext_3255 hypothetical protein YP_001754265.1 KEGG: atc:AGR_L_2575 hypothetical protein YP_001754266.1 KEGG: mex:Mext_3254 threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_001754267.1 PFAM: peptidase M16 domain protein; KEGG: mex:Mext_3253 processing peptidase YP_001754268.1 KEGG: mex:Mext_2032 diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; Diverse 7TM receptor extracellular region 2; Diverse 7TM receptor transmembrane region; PAS fold-3 domain protein; SMART: PAC repeat-containing protein YP_001754269.1 KEGG: mex:Mext_2031 hypothetical protein YP_001754270.1 KEGG: mex:Mext_2030 putative ferredoxin-NAD reductase component YP_001754271.1 KEGG: dsh:Dshi_2677 lipolytic protein G-D-S-L family YP_001754272.1 KEGG: mex:Mext_2028 glycogen/starch/alpha-glucan phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35 YP_001754273.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rca:Rcas_3863 alpha amylase catalytic region YP_001754274.1 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose YP_001754275.1 KEGG: mex:Mext_2714 1,4-alpha-glucan branching enzyme; TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain YP_001754276.1 KEGG: mex:Mext_2713 trehalose synthase; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_001754277.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: mex:Mext_2712 alpha amylase catalytic region YP_001754278.1 amylomaltase; acts to release glucose from maltodextrins YP_001754279.1 KEGG: mex:Mext_2710 malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_001754280.1 KEGG: mex:Mext_0981 hypothetical protein YP_001754281.1 PFAM: YiaAB two helix domain protein; KEGG: bja:bsl7612 hypothetical protein YP_001754282.1 PFAM: PspA/IM30 family protein; KEGG: bra:BRADO6157 putative PspA/IM30 family protein YP_001754283.1 PFAM: regulatory protein TetR; KEGG: mlo:mll2454 probable transcriptional regulator YP_001754284.1 PFAM: NLPA lipoprotein; KEGG: bbt:BBta_0536 putative ABC transporter (substrate-binding protein) YP_001754285.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rle:RL1330 putative transmembrane efflux pump protein YP_001754286.1 PFAM: secretion protein HlyD family protein; KEGG: nha:Nham_3279 secretion protein HlyD YP_001754287.1 PFAM: regulatory protein TetR; KEGG: bja:blr4685 transcriptional regulatory protein YP_001754288.1 PFAM: protein of unknown function DUF1013; KEGG: mex:Mext_4278 protein of unknown function DUF1013 YP_001754289.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: acr:Acry_0452 major facilitator superfamily MFS_1 YP_001754290.1 PFAM: histone deacetylase superfamily; KEGG: oan:Oant_2856 histone deacetylase superfamily YP_001754291.1 PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: mex:Mext_0206 metal-dependent phosphohydrolase HD sub domain YP_001754292.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_3598 LysR substrate-binding YP_001754294.1 PFAM: protein of unknown function DUF1236; KEGG: mex:Mext_1184 protein of unknown function DUF1236 YP_001754295.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: mex:Mext_2527 thiamine pyrophosphate protein TPP binding domain protein YP_001754296.1 TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: spe:Spro_1916 Mn2+/Fe2+ transporter, NRAMP family YP_001754297.1 PFAM: regulatory protein MarR; iron dependent repressor; KEGG: mex:Mext_3596 iron dependent repressor YP_001754298.1 KEGG: mex:Mext_3414 hypothetical protein YP_001754299.1 PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: mex:Mext_3415 transglutaminase domain protein YP_001754300.1 PFAM: protein of unknown function DUF403; protein of unknown function DUF404; protein of unknown function DUF407; KEGG: mex:Mext_3416 protein of unknown function DUF404 YP_001754301.1 PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: mex:Mext_3417 transglutaminase domain protein YP_001754302.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: ccr:CC_2577 hypothetical protein YP_001754303.1 class I; LysRS1; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri this enzyme charges both tRNA molecules for lysine that exist in this organism (but the tRNALysUUU very poorly) and in the presence of LysRS2 can charge tRNAPyl with lysine YP_001754304.1 PFAM: extracellular solute-binding protein family 3; KEGG: mex:Mext_3226 extracellular solute-binding protein family 3 YP_001754305.1 KEGG: mex:Mext_3225 glycosyl transferase family 2 YP_001754307.1 KEGG: mex:Mext_0454 hypothetical protein YP_001754308.1 TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; KEGG: mex:Mext_3913 MazG family protein YP_001754309.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: atc:AGR_L_3214 hypothetical protein YP_001754311.1 PFAM: protein of unknown function DUF892; KEGG: mex:Mext_3614 protein of unknown function DUF892 YP_001754313.1 PFAM: DoxX family protein; KEGG: mex:Mext_3912 membrane protein-like protein YP_001754314.1 PFAM: aminotransferase class IV; KEGG: mex:Mext_3905 aminotransferase class IV YP_001754315.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: mex:Mext_3906 glutamine amidotransferase of anthranilate synthase YP_001754316.1 TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like; KEGG: mex:Mext_3907 para-aminobenzoate synthase, subunit I YP_001754317.1 catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit YP_001754318.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: bja:bll0861 DNA polymerase IV YP_001754319.1 KEGG: hsa:6874 TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa YP_001754320.1 KEGG: mex:Mext_4152 hypothetical protein YP_001754321.1 PFAM: isochorismatase hydrolase; KEGG: mex:Mext_3904 nicotinamidase YP_001754322.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_3903 alcohol dehydrogenase zinc-binding domain protein YP_001754323.1 PFAM: protein of unknown function DUF339; KEGG: mex:Mext_4162 protein of unknown function DUF339 YP_001754325.1 KEGG: mex:Mext_4163 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases YP_001754326.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_4038 major facilitator superfamily MFS_1 YP_001754327.1 KEGG: mex:Mext_1203 hypothetical protein YP_001754328.1 PFAM: HpcH/HpaI aldolase; KEGG: mex:Mext_3917 HpcH/HpaI aldolase YP_001754329.1 PFAM: protein of unknown function DUF559; KEGG: mmr:Mmar10_0541 protein of unknown function DUF559 YP_001754330.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: mex:Mext_1153 ThiJ/PfpI domain protein YP_001754331.1 PFAM: ThiJ/PfpI domain protein; KEGG: mex:Mext_1154 ThiJ/PfpI domain protein YP_001754332.1 KEGG: sco:SCO7053 hypothetical protein YP_001754333.1 TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region; KEGG: mex:Mext_3918 hemimethylated DNA binding protein YP_001754334.1 KEGG: mlo:mll1459 hypothetical protein YP_001754335.1 PFAM: Invasion associated locus B family protein; KEGG: mex:Mext_3384 invasion associated locus B family protein YP_001754336.1 KEGG: mex:Mext_4168 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II-like protein YP_001754337.1 KEGG: mex:Mext_4167 hypothetical protein YP_001754338.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; tryptophan halogenase; KEGG: mex:Mext_3901 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family YP_001754339.1 PFAM: alpha/beta hydrolase fold; KEGG: sec:SC0377 putative hydrolase or acyltransferase YP_001754340.1 catalyzes branch migration in Holliday junction intermediates YP_001754341.1 KEGG: mex:Mext_4160 hypothetical protein YP_001754342.1 PFAM: protein of unknown function DUF502; KEGG: mex:Mext_4159 protein of unknown function DUF502 YP_001754343.1 PFAM: PfkB domain protein; KEGG: psb:Psyr_2510 carbohydrate kinase, PfkB YP_001754344.1 TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; KEGG: mex:Mext_4859 PAS fold-3 domain protein YP_001754345.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_3787 ROSMUCR transcriptional regulator YP_001754346.1 KEGG: bxe:Bxe_A3282 hypothetical protein YP_001754347.1 PFAM: beta-lactamase; KEGG: gbe:GbCGDNIH1_1437 beta-lactamase family protein YP_001754348.1 PFAM: small multidrug resistance protein; KEGG: syw:SYNW1685 putative SMR family multidrug efflux transporter YP_001754349.1 PFAM: cell wall hydrolase SleB; KEGG: mex:Mext_2798 cell wall hydrolase SleB YP_001754354.1 PFAM: Lytic transglycosylase catalytic; KEGG: mex:Mext_0634 lytic transglycosylase catalytic YP_001754355.1 KEGG: mex:Mext_0633 hypothetical protein YP_001754356.1 a periplasmic protein that interacts with and stabilizes MotB; in Rhizobium, interactions between MotB and MotC at the periplasmic surface of the motor control the energy flux or the energy coupling that drives flagellar rotation YP_001754357.1 PFAM: OmpA/MotB domain protein; KEGG: mex:Mext_0631 OmpA/MotB domain protein YP_001754358.1 KEGG: mex:Mext_0630 hypothetical protein YP_001754359.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod YP_001754360.1 PFAM: flagellin domain protein; KEGG: azc:AZC_2699 flagellin YP_001754361.1 KEGG: mex:Mext_0627 flagellar biosynthetic protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein YP_001754362.1 PFAM: flagellar basal body-associated protein FliL; KEGG: mex:Mext_0626 flagellar basal body-associated protein FliL YP_001754363.1 PFAM: flagellar L-ring protein; KEGG: mex:Mext_0625 flagellar L-ring protein YP_001754364.1 KEGG: mex:Mext_0624 conserved hypothetical protein YP_001754365.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella YP_001754366.1 KEGG: mex:Mext_0622 FlgA, flagellar basal-body P-ring formation protein YP_001754367.1 makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella YP_001754368.1 PFAM: flagellar hook-basal body complex protein FliE; KEGG: mex:Mext_0620 flagellar hook-basal body complex protein FliE YP_001754369.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella YP_001754370.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium have one thick flagellum and several thin flagella; the proteins in this cluster are associated with the thin flagella YP_001754371.1 PFAM: transcriptional regulator domain protein; KEGG: azc:AZC_0619 two-component response regulator YP_001754372.1 KEGG: mex:Mext_0617 hypothetical protein YP_001754373.1 KEGG: mex:Mext_0695 hypothetical protein YP_001754374.1 KEGG: mex:Mext_0694 hypothetical protein YP_001754375.1 KEGG: mex:Mext_0693 hypothetical protein YP_001754376.1 KEGG: mex:Mext_0692 hypothetical protein YP_001754377.1 FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium has one thick and several thin flagella; the Bradyrhizobium protein in this cluster are associated with the thin flagella YP_001754378.1 membrane protein involved in the flagellar export apparatus YP_001754379.1 FliQ, with proteins FliP and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the proteins in this cluster are associated with the thin flagella YP_001754380.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella YP_001754381.1 post-transcriptional repressor of flagellum biosynthesis; promotes degradation of fljK mRNA: Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella YP_001754382.1 acts as an activator or flagellin translation and may be required for filament secretion or assembly; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thin flagella YP_001754383.1 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thin flagella YP_001754384.1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook YP_001754385.1 the hook connects flagellar basal body to the flagellar filament YP_001754386.1 involved in type III protein export during flagellum assembly YP_001754387.1 PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: mex:Mext_0681 flagellar basal body rod protein YP_001754388.1 PFAM: protein of unknown function DUF1217; KEGG: sme:SMc00986 hypothetical protein YP_001754389.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: mes:Meso_0303 flagellar motor protein MotA YP_001754390.1 PFAM: flagellar motor switch protein FliM; KEGG: azc:AZC_0643 flagellar motor switch protein YP_001754391.1 KEGG: mex:Mext_0641 hypothetical protein YP_001754392.1 TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: mex:Mext_0639 flagellar motor switch protein FliN YP_001754393.1 PFAM: flagellar motor switch protein FliG; KEGG: mex:Mext_0638 flagellar motor switch protein FliG YP_001754394.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export YP_001754395.1 catalyzes the formation of malate from glyoxylate and acetyl-CoA YP_001754396.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: azc:AZC_0084 transcriptional regulator YP_001754397.1 PFAM: class II aldolase/adducin family protein; KEGG: rpb:RPB_1652 class II aldolase/adducin-like YP_001754398.1 KEGG: mex:Mext_3945 hypothetical protein YP_001754399.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia YP_001754400.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpa:RPA1683 3-oxoacyl-acyl carrier protein reductase YP_001754402.1 KEGG: mex:Mext_4587 hypothetical protein YP_001754403.1 KEGG: mex:Mext_4587 hypothetical protein YP_001754404.1 KEGG: mex:Mext_4196 hypothetical protein YP_001754406.1 KEGG: mex:Mext_1950 hypothetical protein YP_001754407.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_1949 glycosyl transferase family 2 YP_001754408.1 PFAM: General substrate transporter; KEGG: mex:Mext_4338 putative transmembrane transporter protein YP_001754409.1 TIGRFAM: ubiquinol oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; COX aromatic rich domain protein; KEGG: mex:Mext_4337 ubiquinol oxidase, subunit II YP_001754410.1 KEGG: mex:Mext_4336 cytochrome o ubiquinol oxidase, subunit I; TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; PFAM: cytochrome c oxidase subunit I YP_001754411.1 TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; KEGG: mex:Mext_4335 cytochrome o ubiquinol oxidase, subunit III YP_001754412.1 TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: mex:Mext_4334 cytochrome o ubiquinol oxidase subunit IV YP_001754413.1 PFAM: Surfeit locus 1 family protein; KEGG: bbt:BBta_2034 putative SURF1 family protein YP_001754414.1 MDM; functions in conversion of succinate to propionate YP_001754415.1 PFAM: alpha/beta hydrolase fold; KEGG: pnu:Pnuc_2043 alpha/beta hydrolase fold YP_001754416.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate YP_001754417.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rpa:RPA3436 GCN5-related N-acetyltransferase YP_001754418.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination YP_001754419.1 KEGG: mex:Mext_2192 hypothetical protein YP_001754420.1 KEGG: mex:Mext_2621 conserved hypothetical protein YP_001754421.1 PFAM: TOBE domain protein; KEGG: mex:Mext_2622 TOBE domain protein YP_001754422.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity YP_001754423.1 PFAM: GCN5-related N-acetyltransferase; KEGG: aav:Aave_3219 GCN5-related N-acetyltransferase YP_001754424.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate YP_001754425.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; PAS fold-4 domain protein; KEGG: mlo:mlr3504 hypothetical protein YP_001754426.1 PFAM: protein of unknown function DUF55; KEGG: mex:Mext_0729 protein of unknown function DUF55 YP_001754427.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_0912 ATP-binding region ATPase domain protein YP_001754428.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mex:Mext_0913 (2Fe-2S)-binding domain protein YP_001754429.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mex:Mext_0914 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_001754430.1 KEGG: mex:Mext_1518 uracil-DNA glycosylase superfamily YP_001754431.1 type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase YP_001754432.1 PFAM: protein of unknown function DUF1330; KEGG: mex:Mext_1521 protein of unknown function DUF1330 YP_001754433.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_1522 regulatory protein TetR YP_001754434.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bmu:Bmul_0907 short-chain dehydrogenase/reductase SDR YP_001754435.1 KEGG: mex:Mext_1523 hypothetical protein YP_001754436.1 PFAM: isochorismatase hydrolase; KEGG: mex:Mext_0062 isochorismatase hydrolase YP_001754437.1 PFAM: protein of unknown function DUF892; KEGG: mex:Mext_2776 protein of unknown function DUF892 YP_001754438.1 KEGG: mex:Mext_0829 hypothetical protein YP_001754439.1 PFAM: PAS fold-3 domain protein; KEGG: rpd:RPD_3087 ATP-binding region, ATPase-like YP_001754440.1 KEGG: gdi:GDI2976 hypothetical protein YP_001754441.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: reu:Reut_A1470 binding-protein-dependent transport systems inner membrane component YP_001754442.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bmu:Bmul_0420 ABC transporter related YP_001754443.1 KEGG: bxe:Bxe_A4209 ABC taurine transporter, periplasmic ligand binding protein; TIGRFAM: taurine ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3 YP_001754444.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: rpc:RPC_3380 methyl-accepting chemotaxis sensory transducer YP_001754445.1 KEGG: mex:Mext_1782 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001754446.1 PFAM: regulatory protein TetR; KEGG: cmi:CMM_2385 putative transcriptional regulator, TetR family YP_001754447.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: rpd:RPD_4039 maltose O-acetyltransferase YP_001754448.1 KEGG: rpa:RPA2545 possible outer membrane protein YP_001754449.1 KEGG: rpa:RPA3373 hypothetical protein YP_001754450.1 KEGG: mex:Mext_4601 hypothetical protein YP_001754451.1 KEGG: sus:Acid_7575 hypothetical protein YP_001754452.1 PFAM: Extracellular ligand-binding receptor; KEGG: azc:AZC_2947 amino acid ABC transporter substrate binding protein YP_001754453.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bja:blr5870 transcriptional regulatory protein YP_001754454.1 PFAM: HpcH/HpaI aldolase; KEGG: azc:AZC_0555 2-dehydro-3-deoxyglucarate aldolase YP_001754455.1 KEGG: acr:Acry_1159 2-hydroxy-3-oxopropionate reductase; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding YP_001754456.1 KEGG: azc:AZC_2636 galactarate dehydratase; TIGRFAM: galactarate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein YP_001754457.1 PFAM: PepSY-associated TM helix domain protein; KEGG: mex:Mext_2121 PepSY-associated TM helix domain protein YP_001754458.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_2122 TonB-dependent siderophore receptor YP_001754459.1 KEGG: mex:Mext_0395 regulatory protein TetR YP_001754461.1 hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide YP_001754462.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; FAD-binding domain protein; flavodoxin/nitric oxide synthase; KEGG: mex:Mext_2236 flavodoxin/nitric oxide synthase YP_001754463.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: mex:Mext_2235 regulatory protein AsnC/Lrp family YP_001754464.1 KEGG: mex:Mext_2234 adenylylsulfate reductase, thioredoxin dependent; TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; PFAM: phosphoadenosine phosphosulfate reductase YP_001754465.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP YP_001754466.1 KEGG: mex:Mext_2232 sulfate adenylyltransferase, large subunit; TIGRFAM: sulfate adenylyltransferase, large subunit; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein YP_001754467.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: pnu:Pnuc_1328 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase YP_001754468.1 PFAM: Luciferase-like monooxygenase; KEGG: bja:blr1420 flavin dependant oxidoreductase YP_001754469.1 PFAM: aminotransferase class I and II; KEGG: mex:Mext_2070 aminotransferase class I and II YP_001754470.1 KEGG: xcv:XCVc0002 putative PemK-like protein YP_001754471.1 KEGG: plt:Plut_1918 hypothetical protein YP_001754472.1 PFAM: Phosphogluconate dehydrogenase, NAD-binding, putative-like; KEGG: bja:bll4605 hypothetical protein YP_001754473.1 KEGG: mex:Mext_0881 hypothetical protein YP_001754474.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mex:Mext_0870 protein of unknown function DUF6 transmembrane YP_001754475.1 KEGG: mex:Mext_2202 hypothetical protein YP_001754476.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family; some organisms carry two different copies of this enzyme YP_001754477.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis YP_001754478.1 KEGG: mex:Mext_2327 hypothetical protein YP_001754479.1 PFAM: peptidase M16 domain protein; KEGG: mex:Mext_2328 peptidase M16 domain protein YP_001754480.1 PFAM: peptidase M16 domain protein; KEGG: mex:Mext_2329 peptidase M16 domain protein YP_001754481.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mex:Mext_2330 glyoxalase/bleomycin resistance protein/dioxygenase YP_001754482.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mex:Mext_2331 oxidoreductase FAD/NAD(P)-binding domain protein YP_001754483.1 KEGG: bja:bsr8245 hypothetical protein YP_001754484.1 PFAM: TROVE domain protein; KEGG: scl:sce5600 TROVE domain hypothetical protein YP_001754485.1 KEGG: mex:Mext_2985 hypothetical protein YP_001754486.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mex:Mext_2984 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_001754487.1 PFAM: Peptidase M23; KEGG: mex:Mext_2983 peptidase M23B YP_001754488.1 PFAM: protein of unknown function DUF820; KEGG: mex:Mext_2040 protein of unknown function DUF820 YP_001754489.1 KEGG: mex:Mext_2039 hypothetical protein YP_001754490.1 PFAM: protein of unknown function DUF1206; KEGG: mex:Mext_2038 protein of unknown function DUF1206 YP_001754491.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KR domain protein; KEGG: mex:Mext_2037 polysaccharide biosynthesis protein CapD YP_001754492.1 KEGG: aav:Aave_3942 hypothetical protein YP_001754493.1 PFAM: Extracellular ligand-binding receptor; KEGG: rpa:RPA1741 possible branched-chain amino acid transport system substrate-binding protein YP_001754494.1 PFAM: inner-membrane translocator; KEGG: rpa:RPA1740 possible branched-chain amino acid transport system permease protein YP_001754495.1 PFAM: inner-membrane translocator; KEGG: rpa:RPA1739 putative branched-chain amino acid transport system permease protein YP_001754496.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbt:BBta_4092 putative ABC transporter (ATP-binding protein) YP_001754497.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rpa:RPA3289 acyl-CoA dehydrogenase YP_001754498.1 PFAM: aminoglycoside phosphotransferase; KEGG: rpc:RPC_3481 aminoglycoside phosphotransferase YP_001754499.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rpc:RPC_4268 short-chain dehydrogenase/reductase SDR YP_001754500.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reh:H16_B1240 dehydrogenase with different specificities YP_001754501.1 PFAM: AMP-dependent synthetase and ligase; KEGG: reu:Reut_B4042 AMP-dependent synthetase and ligase YP_001754502.1 KEGG: dac:Daci_1499 hypothetical protein YP_001754503.1 KEGG: mex:Mext_4002 ferredoxin protein YP_001754504.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mva:Mvan_0400 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001754505.1 PFAM: cytochrome P450; KEGG: mex:Mext_4000 cytochrome P450 YP_001754506.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; Cache type 2 domain protein; KEGG: bra:BRADO2557 putative methyl-accepting chemotaxis receptor/sensory transducer YP_001754507.1 KEGG: mex:Mext_2465 hypothetical protein YP_001754508.1 PFAM: Protein of unknown function YqcI/YcgG; KEGG: mex:Mext_2464 protein of unknown function YqcI/YcgG YP_001754509.1 PFAM: peptidase C26; KEGG: bbt:BBta_4584 putative gamma-glutamyl hydrolase family protein YP_001754510.1 TIGRFAM: magnesium chelatase accessory protein; PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_3010 magnesium chelatase accessory protein YP_001754512.1 involved in chelation of magnesium into protoporphyrin IX; involved in bacteriochlorophyll biosynthesis; part of a complex with BchI, BchD, and BchH YP_001754513.1 KEGG: mex:Mext_2505 magnesium chelatase ATPase subunit I; TIGRFAM: magnesium chelatase ATPase subunit I; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase YP_001754514.1 catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine YP_001754515.1 KEGG: mex:Mext_4805 hypothetical protein YP_001754516.1 oxidative; catalyzes the formation of divinylprotochlorophyllide from magnesium-protoporphyrin IX 13-monomethyl ester in isocyclic ring formation in chlorophyll biosynthesis YP_001754517.1 KEGG: mex:Mext_4807 hypothetical protein YP_001754518.1 KEGG: mex:Mext_4808 hypothetical protein YP_001754519.1 KEGG: mex:Mext_4809 putative photosynthetic complex assembly protein YP_001754520.1 KEGG: mex:Mext_4810 photosynthetic reaction center H subunit YP_001754521.1 PFAM: PUCC protein; major facilitator superfamily MFS_1; KEGG: mex:Mext_4811 PucC protein YP_001754522.1 catalyzes the formation of Mg-protoporphyrin IX methyl ester and S-adenosyl-L-homocysteine from Mg-protoporphyrin IX and S-adenosyl-L-methionine YP_001754523.1 light-independent; with chlN(bchN) and chlB(bchB) reduces ring D of protochlorophyllide to form chlorophyllide a in chlorophyll/bacteriochlorophyll production YP_001754524.1 involved in chelation of magnesium into protoporphyrin IX; involved in bacteriochlorophyll biosynthesis; the enzyme from Rhodobacter capsulatus contains an Fe-S cluster; part of a complex with BchI, BchD, and BchH YP_001754525.1 light-independent reduction of protochlorophyllide to form chlorophyllide a YP_001754526.1 light-independent reduction of protochlorophyllide to form chlorophyllide a YP_001754527.1 PFAM: 2-vinyl bacteriochlorophyllide hydratase; KEGG: mex:Mext_4817 2-vinyl bacteriochlorophyllide hydratase YP_001754528.1 KEGG: mex:Mext_4818 cobalamin B12-binding YP_001754529.1 KEGG: mex:Mext_4819 transcriptional regulator PpsR; TIGRFAM: transcriptional regulator PpsR; PFAM: helix-turn-helix Fis-type; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001754530.1 TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; PFAM: UbiA prenyltransferase; KEGG: mex:Mext_4820 bacteriochlorophyll/chlorophyll synthetase YP_001754531.1 PFAM: PUCC protein; KEGG: mex:Mext_4821 PucC protein YP_001754532.1 TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; KEGG: mex:Mext_4822 geranylgeranyl reductase YP_001754533.1 PFAM: TspO/MBR family protein; KEGG: mex:Mext_4823 TspO/MBR family protein YP_001754534.1 KEGG: mex:Mext_4824 hypothetical protein YP_001754535.1 PFAM: cytochrome c class I; KEGG: mex:Mext_4825 gluconate 2-dehydrogenase (acceptor) YP_001754536.1 PFAM: protein of unknown function UPF0057; KEGG: mex:Mext_3240 protein of unknown function UPF0057 YP_001754537.1 PFAM: protein of unknown function DUF949; KEGG: mex:Mext_4733 protein of unknown function DUF949 YP_001754538.1 KEGG: sgl:SG0934 hypothetical protein YP_001754539.1 KEGG: mex:Mext_4732 hypothetical protein YP_001754540.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein YP_001754541.1 KEGG: mex:Mext_0020 hypothetical protein YP_001754542.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: mex:Mext_0967 diguanylate cyclase YP_001754543.1 PFAM: response regulator receiver; KEGG: mex:Mext_0966 response regulator receiver YP_001754544.1 KEGG: mex:Mext_0965 hypothetical protein YP_001754545.1 PFAM: Domain of unknown function DUF1849; KEGG: mex:Mext_4720 domain of unknown function DUF1849 YP_001754546.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nha:Nham_2538 ABC transporter related YP_001754547.1 KEGG: mex:Mext_4421 hypothetical protein YP_001754548.1 PFAM: Rv0623 family protein transcription factor; KEGG: bbt:BBta_p0292 hypothetical protein YP_001754549.1 PFAM: PilT protein domain protein; KEGG: bbt:BBta_p0291 hypothetical protein YP_001754550.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate YP_001754551.1 TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: mex:Mext_1762 peptide methionine sulfoxide reductase YP_001754552.1 PFAM: Prephenate dehydrogenase; NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: mex:Mext_1592 prephenate dehydrogenase YP_001754553.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis YP_001754557.1 KEGG: mex:Mext_1760 homoserine O-acetyltransferase; TIGRFAM: homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold YP_001754558.1 TIGRFAM: methionine biosynthesis protein MetW; PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: mex:Mext_1759 methionine biosynthesis protein MetW YP_001754559.1 KEGG: sye:Syncc9902_0250 hypothetical protein YP_001754560.1 PFAM: adenylylsulfate kinase; KEGG: nfa:nfa24540 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein YP_001754561.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mex:Mext_4113 ATP-binding region ATPase domain protein YP_001754562.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_4114 response regulator receiver YP_001754563.1 KEGG: mex:Mext_4115 hypothetical protein YP_001754564.1 KEGG: mex:Mext_4116 nuclease (SNase domain protein) YP_001754565.1 KEGG: mex:Mext_2315 hypothetical protein YP_001754566.1 PFAM: Catalase domain protein; KEGG: mex:Mext_2314 catalase domain protein YP_001754567.1 PFAM: Lytic transglycosylase catalytic; Tetratricopeptide TPR_4; KEGG: mex:Mext_3190 lytic transglycosylase catalytic YP_001754568.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis YP_001754569.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation YP_001754570.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: bra:BRADO4472 putative thiol-specific antioxidant related protein (thiol peroxidase Bcp) YP_001754571.1 PFAM: protein of unknown function DUF88; KEGG: mex:Mext_3193 protein of unknown function DUF88 YP_001754572.1 KEGG: mex:Mext_3196 RelA/SpoT family protein; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region YP_001754573.1 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits YP_001754574.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: mex:Mext_0556 malonyl CoA-acyl carrier protein transacylase YP_001754575.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: mex:Mext_0557 3-oxoacyl-(acyl-carrier-protein) reductase YP_001754576.1 carries the fatty acid chain in fatty acid biosynthesis YP_001754577.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: mex:Mext_0559 3-oxoacyl-(acyl-carrier-protein) synthase 2 YP_001754578.1 PFAM: protein of unknown function DUF937; KEGG: mex:Mext_4053 protein of unknown function DUF937 YP_001754580.1 KEGG: rpe:RPE_4894 hypothetical protein YP_001754581.1 KEGG: mex:Mext_3187 hypothetical protein YP_001754582.1 KEGG: ang:An12g06380 hypothetical protein Pfam: Collagen PROSITE: ALA_RICH ASP_RICH GLY_RICH SER_RICH YP_001754584.1 KEGG: mva:Mvan_0626 conserved hypothetical proline rich protein YP_001754585.1 KEGG: mex:Mext_4797 hypothetical protein YP_001754586.1 KEGG: mex:Mext_4701 hypothetical protein YP_001754588.1 TIGRFAM: phasin; PFAM: Phasin 2 family protein; KEGG: mex:Mext_2560 phasin YP_001754590.1 KEGG: mex:Mext_4374 hypothetical protein YP_001754591.1 KEGG: mex:Mext_4710 hypothetical protein YP_001754594.1 KEGG: mex:Mext_2141 hypothetical protein YP_001754595.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_2834 ROSMUCR transcriptional regulator YP_001754596.1 KEGG: mex:Mext_4789 hypothetical protein YP_001754597.1 KEGG: mex:Mext_0168 hypothetical protein YP_001754598.1 KEGG: mex:Mext_4705 hypothetical protein YP_001754599.1 KEGG: mex:Mext_1879 hypothetical protein YP_001754600.1 KEGG: bam:Bamb_3933 hypothetical protein YP_001754601.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: rpa:RPA2957 putative diguanylate cyclase (GGDEF)/phosphodiesterase (EAL) YP_001754602.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr) YP_001754603.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: dsy:DSY3454 hypothetical protein YP_001754604.1 KEGG: mex:Mext_0790 hypothetical protein YP_001754605.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_4741 ABC transporter related YP_001754606.1 KEGG: azc:AZC_4466 translation initiation factor IF-2 YP_001754607.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: azc:AZC_4467 regulatory protein YP_001754608.1 PFAM: Peptidoglycan-binding LysM; KEGG: mex:Mext_4742 peptidoglycan-binding LysM YP_001754609.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_4743 hypothetical protein YP_001754610.1 TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: xau:Xaut_4686 pyrrolo-quinoline quinone YP_001754611.1 TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: phosphoesterase PA-phosphatase related; Autotransporter beta- domain protein; KEGG: psp:PSPPH_0319 autotransporter YP_001754612.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rle:pRL100447 putative LysR family transcriptional regulator YP_001754613.1 PFAM: aldo/keto reductase; KEGG: mex:Mext_3802 aldo/keto reductase YP_001754614.1 KEGG: xau:Xaut_1437 extracellular ligand-binding receptor YP_001754615.1 PFAM: protein of unknown function DUF849; KEGG: swi:Swit_1780 protein of unknown function DUF849 YP_001754616.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bbr:BB1113 probable short chain dehydrogenase YP_001754617.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: dsy:DSY4723 hypothetical protein YP_001754618.1 PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mex:Mext_4631 AAA ATPase central domain protein YP_001754619.1 KEGG: mex:Mext_4632 hypothetical protein YP_001754620.1 KEGG: mex:Mext_4633 hypothetical protein YP_001754621.1 PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: mex:Mext_4634 sodium/hydrogen exchanger YP_001754622.1 KEGG: mex:Mext_4464 hypothetical protein YP_001754623.1 KEGG: mex:Mext_4465 hypothetical protein YP_001754624.1 PFAM: ferredoxin; KEGG: mex:Mext_4466 ferredoxin YP_001754625.1 PFAM: Hpt domain protein; KEGG: mex:Mext_4467 Hpt domain protein YP_001754626.1 KEGG: mex:Mext_4468 hypothetical protein YP_001754627.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_0888 hypothetical protein YP_001754628.1 KEGG: mex:Mext_0889 hypothetical protein YP_001754629.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_0890 major facilitator superfamily MFS_1 YP_001754630.1 PFAM: protein of unknown function DUF140; KEGG: mex:Mext_0891 protein of unknown function DUF140 YP_001754631.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_0892 ABC transporter related YP_001754632.1 PFAM: Mammalian cell entry related domain protein; KEGG: mex:Mext_0893 mammalian cell entry related domain protein YP_001754633.1 KEGG: mex:Mext_0894 protein of unknown function DUF330 YP_001754634.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: swi:Swit_0986 helix-turn-helix-domain containing protein, AraC type YP_001754635.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: mex:Mext_4469 helix-turn-helix domain protein YP_001754636.1 KEGG: azc:AZC_1826 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1 YP_001754637.1 PFAM: thiamine monophosphate synthase; KEGG: mex:Mext_4471 thiamine-phosphate diphosphorylase YP_001754638.1 KEGG: mex:Mext_4472 hypothetical protein YP_001754639.1 PFAM: protein of unknown function DUF333; KEGG: sbm:Shew185_0128 protein of unknown function DUF333 YP_001754640.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate YP_001754641.1 KEGG: mex:Mext_1774 rhodanese YP_001754642.1 PFAM: Sulphur oxidation protein SoxZ; KEGG: mex:Mext_1775 sulphur oxidation protein SoxZ YP_001754643.1 PFAM: beta-lactamase domain protein; KEGG: mex:Mext_1776 beta-lactamase domain protein YP_001754644.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_1777 regulatory protein TetR YP_001754645.1 TIGRFAM: exsB protein; PFAM: ExsB family protein; KEGG: mex:Mext_1226 ExsB protein YP_001754646.1 TIGRFAM: queuosine biosynthesis protein QueD; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: mex:Mext_1225 queuosine biosynthesis protein QueD YP_001754647.1 PFAM: dihydrodipicolinate synthetase; KEGG: oan:Oant_2898 dihydrodipicolinate synthetase YP_001754648.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bvi:Bcep1808_6574 transcriptional regulator, GntR family YP_001754649.1 PFAM: extracellular solute-binding protein family 5; KEGG: azc:AZC_2015 ABC transporter substrate binding protein YP_001754650.1 KEGG: mex:Mext_0911 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase YP_001754651.1 TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: mex:Mext_0910 cobalamin 5'-phosphate synthase YP_001754652.1 PFAM: protein of unknown function DUF1289; KEGG: mex:Mext_0908 protein of unknown function DUF1289 YP_001754653.1 KEGG: mex:Mext_0907 conserved hypothetical transmembrane signal peptide protein YP_001754654.1 PFAM: dihydrouridine synthase DuS; KEGG: mex:Mext_0946 dihydrouridine synthase DuS YP_001754655.1 KEGG: pla:Plav_2887 MotA/TolQ/ExbB proton channel YP_001754656.1 PFAM: OmpA/MotB domain protein; KEGG: pla:Plav_2886 OmpA/MotB domain protein YP_001754657.1 PFAM: histidine kinase HAMP region domain protein; Cache type 2 domain protein; KEGG: bbt:BBta_4464 putative methyl-accepting chemotaxis receptor/sensory transducer YP_001754662.1 KEGG: sil:SPO2981 hypothetical protein YP_001754663.1 KEGG: xau:Xaut_3642 hypothetical protein YP_001754665.1 KEGG: xau:Xaut_3648 hypothetical protein YP_001754666.1 KEGG: tcr:507957.200 mucin-associated surface protein (MASP) Pfam: Prosystemin PROSITE: ALA_RICH YP_001754668.1 KEGG: aeh:Mlg_1066 hypothetical protein YP_001754670.1 KEGG: mex:Mext_0764 hypothetical protein YP_001754671.1 KEGG: sty:STY1055 putative bacteriophage protein YP_001754672.1 KEGG: xau:Xaut_1087 AAA ATPase YP_001754673.1 KEGG: xau:Xaut_3438 virulence-associated protein E YP_001754674.1 KEGG: sen:SACE_0466 hypothetical protein YP_001754675.1 PFAM: integrase family protein; KEGG: bbt:BBta_0580 putative phage integrase YP_001754676.1 PFAM: chemotaxis sensory transducer; KEGG: bbt:BBta_5110 hypothetical protein YP_001754677.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_4203 short-chain dehydrogenase/reductase SDR YP_001754681.1 PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: rpa:RPA1907 hypothetical protein YP_001754682.1 PFAM: UreE urease accessory domain protein; KEGG: mex:Mext_0944 UreE urease accessory domain protein YP_001754683.1 KEGG: mex:Mext_0943 hypothetical protein YP_001754684.1 PFAM: heat shock protein DnaJ domain protein; KEGG: mex:Mext_0942 heat shock protein DnaJ domain protein YP_001754685.1 PFAM: Peptidoglycan-binding domain 1 protein; N-acetylmuramoyl-L-alanine amidase family 2; KEGG: mex:Mext_0941 N-acetylmuramoyl-L-alanine amidase family 2 YP_001754686.1 PFAM: Integral membrane protein TerC; KEGG: mex:Mext_0880 integral membrane protein TerC YP_001754687.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_1340 major facilitator superfamily MFS_1 YP_001754688.1 PFAM: HI0933 family protein; FAD dependent oxidoreductase; KEGG: mex:Mext_0879 HI0933 family protein YP_001754689.1 PFAM: Collagen triple helix repeat; KEGG: mex:Mext_0878 collagen triple helix repeat YP_001754690.1 KEGG: mex:Mext_4574 hypothetical protein YP_001754691.1 KEGG: mex:Mext_4575 hypothetical protein YP_001754692.1 KEGG: ccr:CC_3211 DNA polymerase III, alpha subunit, putative; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein YP_001754693.1 KEGG: mex:Mext_0877 hypothetical protein YP_001754694.1 TIGRFAM: formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme (Fae); KEGG: mex:Mext_1450 formaldehyde-activating enzyme YP_001754695.1 KEGG: acr:Acry_1405 natural resistance-associated macrophage protein YP_001754696.1 KEGG: mex:Mext_1451 hypothetical protein YP_001754697.1 KEGG: mex:Mext_1452 hypothetical protein YP_001754698.1 Represses a number of genes involved in the response to DNA damage YP_001754699.1 PFAM: ComEC/Rec2-related protein; KEGG: mex:Mext_4682 ComEC/Rec2-related protein YP_001754700.1 TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase class Ic; KEGG: mex:Mext_4681 glutamyl-tRNA synthetase YP_001754701.1 KEGG: mex:Mext_4680 citrate synthase I; TIGRFAM: citrate synthase I; PFAM: Citrate synthase YP_001754702.1 PFAM: HhH-GPD family protein; AlkA domain protein; KEGG: mex:Mext_2913 AlkA domain protein YP_001754703.1 KEGG: rpc:RPC_1613 hypothetical protein YP_001754705.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling YP_001754706.1 TIGRFAM: DNA repair protein RecO; KEGG: mex:Mext_1051 DNA repair protein RecO YP_001754708.1 PFAM: ChaC family protein; AIG2 family protein; KEGG: mex:Mext_1050 ChaC family protein YP_001754710.1 KEGG: mav:MAV_5246 copper-translocating P-type ATPase YP_001754711.1 PFAM: natural resistance-associated macrophage protein; KEGG: sus:Acid_6457 natural resistance-associated macrophage protein YP_001754712.1 KEGG: mex:Mext_1048 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein YP_001754714.1 PFAM: glycosyl transferase family 28; KEGG: mex:Mext_2132 glycosyl transferase family 28 YP_001754716.1 KEGG: mex:Mext_1780 hypothetical protein YP_001754717.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_1064 ABC transporter related YP_001754718.1 TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; KEGG: mex:Mext_1065 lipoprotein releasing system, transmembrane protein, LolC/E family YP_001754719.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro) YP_001754720.1 PFAM: protein of unknown function DUF1467; KEGG: mex:Mext_1068 protein of unknown function DUF1467 YP_001754721.1 KEGG: mex:Mext_1069 methylmalonyl-CoA epimerase; TIGRFAM: methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_001754722.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: mex:Mext_1070 beta-lactamase domain protein YP_001754723.1 TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; KEGG: mex:Mext_1071 biotin--acetyl-CoA-carboxylase ligase YP_001754724.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: mex:Mext_1072 proton-translocating NADH-quinone oxidoreductase, chain N YP_001754725.1 KEGG: mex:Mext_1073 proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_001754726.1 KEGG: mex:Mext_1074 proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I) YP_001754727.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: mex:Mext_1075 NADH-ubiquinone oxidoreductase chain 4L YP_001754728.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: mex:Mext_1076 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_001754729.1 Catalyzes the transfer of electrons from NADH to quinone YP_001754730.1 Catalyzes the transfer of electrons from NADH to quinone YP_001754731.1 Catalyzes the transfer of electrons from NADH to quinone YP_001754732.1 KEGG: rpe:RPE_2528 hypothetical protein YP_001754733.1 part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase YP_001754734.1 KEGG: mex:Mext_1081 NADH-quinone oxidoreductase, E subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit YP_001754735.1 KEGG: mex:Mext_1082 NADH dehydrogenase I, D subunit; TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa YP_001754736.1 KEGG: mex:Mext_1083 NADH (or F420H2) dehydrogenase, subunit C; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit YP_001754737.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen YP_001754738.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: mex:Mext_1085 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 YP_001754739.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bte:BTH_I0721 hypothetical protein YP_001754740.1 PFAM: protein of unknown function DUF1127; KEGG: azc:AZC_2965 uncharacterized conserved small protein YP_001754741.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: mlo:mlr1139 probable transcriptional regulator YP_001754742.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: atu:Atu4711 two component sensor kinase YP_001754743.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: atc:AGR_L_339 hypothetical protein YP_001754744.1 KEGG: rle:RL3066 putative transmembrane protein YP_001754745.1 KEGG: pna:Pnap_2596 hypothetical protein YP_001754746.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_2624 ABC transporter related YP_001754747.1 PFAM: Aldose 1-epimerase; KEGG: mex:Mext_2623 aldose 1-epimerase YP_001754748.1 KEGG: mex:Mext_0733 uroporphyrinogen III synthase HEM4 YP_001754749.1 KEGG: mex:Mext_0734 hypothetical protein YP_001754750.1 PFAM: HemY domain protein; Tetratricopeptide TPR_4; KEGG: mex:Mext_0735 HemY domain protein YP_001754751.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_2173 NUDIX hydrolase YP_001754753.1 PFAM: manganese containing catalase; KEGG: mex:Mext_2775 catalase YP_001754754.1 PFAM: protein of unknown function DUF156; KEGG: sth:STH2550 hypothetical protein YP_001754755.1 KEGG: mex:Mext_4532 hypothetical protein YP_001754756.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mex:Mext_4870 RNA polymerase sigma factor, sigma-70 family YP_001754757.1 TIGRFAM: TonB family protein; KEGG: mex:Mext_0994 TonB family protein YP_001754758.1 KEGG: mex:Mext_3524 hypothetical protein YP_001754759.1 KEGG: mex:Mext_4701 hypothetical protein YP_001754760.1 PFAM: TadE family protein; KEGG: mex:Mext_3512 TadE family protein YP_001754761.1 PFAM: TadE family protein; KEGG: mex:Mext_3513 TadE family protein YP_001754762.1 KEGG: mex:Mext_3511 hypothetical protein YP_001754763.1 PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: mex:Mext_3509 metal-dependent phosphohydrolase HD sub domain YP_001754764.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: mex:Mext_3510 ATP-binding region ATPase domain protein YP_001754765.1 KEGG: mex:Mext_0816 capsule polysaccharide export protein-like protein YP_001754766.1 KEGG: kra:Krad_3435 competence protein ComEA helix-hairpin-helix repeat protein YP_001754767.1 PFAM: response regulator receiver; KEGG: sme:SMa0114 putative sensory transduction regulatory protein YP_001754768.1 KEGG: mex:Mext_2022 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001754769.1 TIGRFAM: methyltransferase FkbM family; KEGG: bte:BTH_I2582 Ata11 protein YP_001754770.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+) YP_001754771.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: azc:AZC_0389 RNA polymerase ECF-type sigma factor YP_001754772.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; KEGG: bja:bll4366 hypothetical protein YP_001754773.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_0518 ABC transporter related YP_001754774.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: sme:SMa1103 probable adenylate cyclase YP_001754776.1 PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; protein of unknown function DUF1205; KEGG: bja:bll2692 putative glycosyltransferase YP_001754777.1 PFAM: cytochrome P450; KEGG: xcv:XCV2150 cytochrome P-450 YP_001754779.1 PFAM: alpha/beta hydrolase fold; KEGG: sus:Acid_6639 alpha/beta hydrolase fold YP_001754780.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bja:bll2691 putative multidrug resistance protein YP_001754781.1 PFAM: Glycosyltransferase 28 domain; KEGG: fre:Franean1_5223 glycosyltransferase, MGT family YP_001754783.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: bja:blr2694 VirG-like two component response regulator YP_001754784.1 PFAM: Di-haem cytochrome c peroxidase; KEGG: bja:blr2696 cytochrome c peroxidase YP_001754785.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: bja:blr2697 VirA-like protein YP_001754786.1 KEGG: mex:Mext_3622 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001754787.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_B0401 putative short-chain dehydrogenase, oxidoreductase YP_001754788.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_B0661 transcriptional regulator, AraC family YP_001754789.1 PFAM: protein of unknown function DUF1624; KEGG: mex:Mext_1201 protein of unknown function DUF1624 YP_001754790.1 TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: mex:Mext_3094 sodium/hydrogen exchanger YP_001754792.1 SMART: metal-dependent phosphohydrolase HD region; KEGG: sco:SCO2623 hypothetical protein YP_001754794.1 PFAM: Aldehyde Dehydrogenase; KEGG: reh:H16_B0212 NAD-dependent aldehyde dehydrogenase YP_001754795.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: azc:AZC_4176 acetolactate synthase large subunit YP_001754796.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mpt:Mpe_A3658 transcriptional regulator, GntR family YP_001754797.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: azc:AZC_2642 methyltransf 6 family protein YP_001754798.1 PFAM: major facilitator superfamily MFS_1; KEGG: bbt:BBta_5566 putative transport protein, MFS superfamily YP_001754799.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate YP_001754800.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bpt:Bpet2682 hypothetical protein YP_001754801.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity YP_001754802.1 KEGG: mex:Mext_1600 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase YP_001754803.1 PFAM: regulatory protein ArsR; UbiE/COQ5 methyltransferase; methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: mex:Mext_1599 methyltransferase type 11 YP_001754804.1 PFAM: Phosphoglycerate mutase; KEGG: ret:RHE_CH00893 probable phosphoglycerate mutase protein YP_001754805.1 PFAM: protein of unknown function UPF0187; KEGG: mex:Mext_0368 protein of unknown function UPF0187 YP_001754806.1 PFAM: ROK family protein; KEGG: mex:Mext_2323 ROK family protein YP_001754807.1 PFAM: sodium:dicarboxylate symporter; KEGG: mex:Mext_2324 sodium:dicarboxylate symporter YP_001754808.1 KEGG: mex:Mext_0872 hypothetical protein YP_001754809.1 TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; KEGG: mex:Mext_0873 methionine-R-sulfoxide reductase YP_001754810.1 PFAM: ribonuclease BN; KEGG: mex:Mext_0874 ribonuclease BN YP_001754811.1 KEGG: mex:Mext_1536 UV damage repair endonuclease YP_001754812.1 PFAM: protein of unknown function DUF1234; KEGG: mex:Mext_1786 protein of unknown function DUF1234 YP_001754814.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_1784 hypothetical protein YP_001754815.1 PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: mex:Mext_1783 protein of unknown function DUF463 YcjX family protein YP_001754816.1 KEGG: mex:Mext_4626 hypothetical protein YP_001754817.1 TIGRFAM: histidinol-phosphate phosphatase; PFAM: inositol monophosphatase; KEGG: mex:Mext_4559 histidinol-phosphate phosphatase YP_001754818.1 PFAM: protein of unknown function UPF0118; KEGG: mex:Mext_4560 protein of unknown function UPF0118 YP_001754819.1 PFAM: MmgE/PrpD family protein; KEGG: bbt:BBta_2745 hypothetical protein YP_001754820.1 catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate YP_001754821.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mex:Mext_4563 pyridoxamine 5'-phosphate oxidase-related FMN-binding YP_001754822.1 KEGG: mex:Mext_4564 hypothetical protein YP_001754823.1 KEGG: mex:Mext_4565 MRP protein-like protein YP_001754824.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: mex:Mext_4566 molybdopterin-guanine dinucleotide biosynthesis protein A YP_001754825.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: mex:Mext_4572 peptidyl-prolyl cis-trans isomerase cyclophilin type YP_001754826.1 KEGG: mex:Mext_4571 hypothetical protein YP_001754827.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: mex:Mext_4570 peptidyl-prolyl cis-trans isomerase cyclophilin type YP_001754828.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA YP_001754829.1 TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; KEGG: mex:Mext_4567 DNA gyrase, A subunit YP_001754830.1 KEGG: bbt:BBta_0355 hypothetical protein YP_001754831.1 PFAM: peptidase S49; KEGG: mex:Mext_3105 peptidase S49 YP_001754832.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: bja:bll5309 putative methyl-accepting chemotaxis protein YP_001754833.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: mex:Mext_3131 6-phosphogluconate dehydrogenase NAD-binding YP_001754834.1 PFAM: peptidase S58 DmpA; KEGG: mex:Mext_4248 peptidase S58 DmpA YP_001754835.1 PFAM: NIPSNAP family containing protein; KEGG: rpc:RPC_0549 NIPSNAP YP_001754836.1 KEGG: mex:Mext_3112 hypothetical protein YP_001754837.1 KEGG: mex:Mext_4217 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001754838.1 TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: mex:Mext_4249 RarD protein, DMT superfamily transporter YP_001754839.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mex:Mext_4258 pyridoxamine 5'-phosphate oxidase-related FMN-binding YP_001754840.1 PFAM: lipid A biosynthesis domain protein; KEGG: mex:Mext_4175 lipid A biosynthesis domain protein YP_001754841.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_4174 glycosyl transferase family 2 YP_001754842.1 PFAM: glycosyl transferase family 39; KEGG: mex:Mext_4173 glycosyl transferase family 39 YP_001754843.1 TIGRFAM: cystathionine beta-lyase; PFAM: aminotransferase class V; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: mex:Mext_4252 cystathionine beta-lyase YP_001754844.1 KEGG: mex:Mext_4251 hypothetical protein YP_001754845.1 KEGG: mex:Mext_4250 hypothetical protein YP_001754846.1 KEGG: mex:Mext_2820 nitrogen regulation protein NR(I); TIGRFAM: nitrogen regulation protein NR(I); PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_001754847.1 KEGG: mex:Mext_2819 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001754848.1 TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; KEGG: mex:Mext_2818 TIM-barrel protein, nifR3 family YP_001754849.1 TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MECDP-synthase; KEGG: mex:Mext_2817 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_001754850.1 KEGG: mex:Mext_4778 uncharacterized relative of glutathione S-transferase MAPEG superfamily-like protein YP_001754851.1 PFAM: CinA domain protein; KEGG: mex:Mext_2816 CinA domain protein YP_001754852.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: mxa:MXAN_6265 monooxygenase, FAD-dependent YP_001754853.1 PFAM: cyclase/dehydrase; KEGG: mex:Mext_2800 cyclase/dehydrase YP_001754854.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group YP_001754855.1 PFAM: major intrinsic protein; KEGG: azc:AZC_2711 glycerol uptake facilitator protein YP_001754856.1 TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: mex:Mext_4066 glycerol kinase YP_001754857.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane YP_001754858.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: acr:Acry_1769 transcriptional regulator, DeoR family YP_001754860.1 PFAM: CheW domain protein; KEGG: mex:Mext_2835 CheW domain protein YP_001754861.1 PFAM: MCP methyltransferase CheR-type; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; KEGG: mex:Mext_2836 protein-glutamate O-methyltransferase YP_001754862.1 PFAM: CheW domain protein; KEGG: mex:Mext_2837 CheW domain protein YP_001754863.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_2838 chemotaxis sensory transducer YP_001754864.1 PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: mex:Mext_2839 response regulator receiver YP_001754865.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: mex:Mext_2840 protein-glutamate methylesterase YP_001754866.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_2841 ATP-binding region ATPase domain protein YP_001754867.1 TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: mex:Mext_2842 PAS sensor protein YP_001754868.1 is a component of the macrolide binding site in the peptidyl transferase center YP_001754869.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme YP_001754870.1 PFAM: beta-lactamase domain protein; KEGG: mex:Mext_2177 beta-lactamase domain protein YP_001754871.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3 YP_001754872.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA YP_001754873.1 KEGG: scl:sce0458 hypothetical protein YP_001754874.1 KEGG: mex:Mext_0856 hypothetical protein YP_001754875.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP YP_001754876.1 TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; KEGG: mex:Mext_2181 preprotein translocase, SecY subunit YP_001754877.1 late assembly protein YP_001754878.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7 YP_001754879.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance YP_001754880.1 binds 5S rRNA along with protein L5 and L25 YP_001754881.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance YP_001754882.1 PFAM: ribosomal protein S8; KEGG: mex:Mext_2187 ribosomal protein S8 YP_001754883.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif YP_001754884.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13 YP_001754885.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel YP_001754886.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase YP_001754887.1 KEGG: mex:Mext_2921 hypothetical protein YP_001754888.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: spe:Spro_0019 polar amino acid ABC transporter, inner membrane subunit YP_001754889.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmn:BMA10247_0838 binding-protein-dependent transport system inner membrane component YP_001754890.1 PFAM: extracellular solute-binding protein family 3; KEGG: bmu:Bmul_1621 extracellular solute-binding protein family 3 YP_001754891.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance YP_001754892.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit YP_001754893.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene YP_001754894.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_001754895.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex YP_001754896.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin YP_001754897.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA YP_001754898.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel YP_001754899.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation YP_001754900.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA YP_001754901.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center YP_001754902.1 KEGG: mex:Mext_2168 ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; Ribosomal protein S3 domain; SMART: KH domain protein YP_001754903.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e YP_001754904.1 PFAM: ribosomal protein L29; KEGG: mex:Mext_2170 ribosomal protein L29 YP_001754905.1 primary binding protein; helps mediate assembly; involved in translation fidelity YP_001754906.1 KEGG: mex:Mext_2601 RecA protein; TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: AAA ATPase YP_001754907.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; KEGG: mex:Mext_2602 PAS sensor protein YP_001754908.1 TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; KEGG: mex:Mext_2603 flagellar biosynthetic protein FlhB YP_001754909.1 TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: mex:Mext_2604 flagellar biosynthetic protein FliR YP_001754910.1 TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: mex:Mext_2605 flagellar biosynthetic protein FliQ YP_001754911.1 TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: mex:Mext_2606 flagellar hook-basal body complex subunit FliE YP_001754912.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod YP_001754913.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum YP_001754914.1 KEGG: mex:Mext_2609 hypothetical protein YP_001754915.1 KEGG: nha:Nham_1262 hypothetical protein YP_001754916.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: mex:Mext_2487 major facilitator superfamily MFS_1 YP_001754917.1 binds the polymerase to DNA and acts as a sliding clamp YP_001754918.1 KEGG: mex:Mext_0003 DNA replication and repair protein RecF; TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; SMART: AAA ATPase YP_001754919.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_0141 chemotaxis sensory transducer YP_001754920.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mex:Mext_4287 glyoxalase/bleomycin resistance protein/dioxygenase YP_001754921.1 PFAM: Phosphoglycerate mutase; KEGG: mex:Mext_1401 phosphoglycerate mutase YP_001754922.1 KEGG: mex:Mext_1402 hypothetical protein YP_001754923.1 PFAM: high-affinity nickel-transporter; KEGG: mex:Mext_1403 high-affinity nickel-transporter YP_001754924.1 PFAM: protein of unknown function DUF1007; KEGG: mex:Mext_1404 protein of unknown function DUF1007 YP_001754925.1 PFAM: extracellular solute-binding protein family 3; KEGG: bam:Bamb_6249 extracellular solute-binding protein, family 3 YP_001754926.1 PFAM: sodium:dicarboxylate symporter; KEGG: rme:Rmet_1122 sodium:dicarboxylate symporter YP_001754927.1 PFAM: inner-membrane translocator; KEGG: azc:AZC_2942 branched-chain amino acid ABC transporter permease protein YP_001754928.1 PFAM: inner-membrane translocator; KEGG: xau:Xaut_3901 inner-membrane translocator YP_001754929.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mlo:mll3975 ATP-binding component of ABC transporter (high-affinity branched-chain amino acid transport) YP_001754930.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azc:AZC_2945 amino acid ABC transporter ATP-binding protein YP_001754931.1 KEGG: bcs:BCAN_A1824 hypothetical protein YP_001754932.1 PFAM: Extracellular ligand-binding receptor; KEGG: azc:AZC_2947 amino acid ABC transporter substrate binding protein YP_001754933.1 PFAM: extracellular solute-binding protein family 3; KEGG: mex:Mext_3961 extracellular solute-binding protein family 3 YP_001754934.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_3962 polar amino acid ABC transporter, inner membrane subunit YP_001754935.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_3963 polar amino acid ABC transporter, inner membrane subunit YP_001754936.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_3964 ABC transporter related YP_001754937.1 KEGG: mex:Mext_1506 carbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein YP_001754938.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: mex:Mext_1507 molybdopterin biosynthesis MoaE protein YP_001754940.1 PFAM: protein of unknown function UPF0118; KEGG: mex:Mext_1508 protein of unknown function UPF0118 YP_001754941.1 PFAM: Amidase; KEGG: mex:Mext_0916 amidase YP_001754942.1 PFAM: Extensin family protein; KEGG: mex:Mext_0917 extensin family protein YP_001754943.1 KEGG: mex:Mext_0918 hypothetical protein YP_001754944.1 PFAM: ribonuclease T2; KEGG: mex:Mext_0919 ribonuclease T2 YP_001754945.1 PFAM: protein of unknown function DUF519; KEGG: mex:Mext_0920 protein of unknown function DUF519 YP_001754946.1 KEGG: mex:Mext_2100 hypothetical protein YP_001754947.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_4221 GCN5-related N-acetyltransferase YP_001754948.1 PFAM: Peptidoglycan-binding LysM; Peptidase M23; KEGG: mex:Mext_4231 peptidase M23B YP_001754949.1 PFAM: protein of unknown function DUF937; KEGG: bra:BRADO4558 hypothetical protein YP_001754951.1 PFAM: protein of unknown function DUF937; KEGG: spe:Spro_3060 protein of unknown function DUF937 YP_001754952.1 PFAM: alpha/beta hydrolase fold; KEGG: bxe:Bxe_B2687 putative epoxide hydrolase YP_001754953.1 TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: mex:Mext_4229 preprotein translocase, YajC subunit YP_001754954.1 TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecD; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: mex:Mext_4228 protein-export membrane protein SecD YP_001754955.1 TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: mex:Mext_4227 protein-export membrane protein SecF YP_001754956.1 PFAM: protein of unknown function DUF498; KEGG: mex:Mext_4226 protein of unknown function DUF498 YP_001754957.1 PFAM: Squalene/phytoene synthase; KEGG: mex:Mext_4225 squalene/phytoene synthase YP_001754958.1 KEGG: mex:Mext_4232 protein-L-isoaspartate(D-aspartate) O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; Methyltransferase type 11; SMART: ribosomal RNA adenine methylase transferase YP_001754959.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate YP_001754960.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_001754961.1 KEGG: mex:Mext_1204 hypothetical protein YP_001754962.1 PFAM: OsmC family protein; KEGG: mex:Mext_1205 OsmC family protein YP_001754963.1 PFAM: protein of unknown function DUF815; KEGG: mex:Mext_4230 protein of unknown function DUF815 YP_001754964.1 KEGG: mex:Mext_1524 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase YP_001754965.1 PFAM: HpcH/HpaI aldolase; KEGG: azc:AZC_3736 citrate lyase beta subunit YP_001754966.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_1525 NUDIX hydrolase YP_001754967.1 PFAM: carbonic anhydrase; KEGG: mex:Mext_1526 carbonate dehydratase YP_001754968.1 KEGG: mex:Mext_1767 hypothetical protein YP_001754969.1 PFAM: acyltransferase 3; KEGG: mex:Mext_1766 acyltransferase 3 YP_001754970.1 PFAM: UspA domain protein; KEGG: mex:Mext_1765 UspA domain protein YP_001754971.1 KEGG: pap:PSPA7_5606 hypothetical protein YP_001754972.1 PFAM: histidine triad (HIT) protein; KEGG: mex:Mext_4448 histidine triad (HIT) protein YP_001754973.1 PFAM: NUDIX hydrolase; NADH pyrophosphatase-like ; Zinc ribbon NADH pyrophosphatase; KEGG: mex:Mext_4447 NUDIX hydrolase YP_001754974.1 TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mex:Mext_3223 uroporphyrin-III C-methyltransferase YP_001754975.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: mex:Mext_3222 nitrate reductase YP_001754976.1 Catalyzes the reduction of sulfite to sulfide, an essential step in the anaerobic sulfate-respiration pathway YP_001754977.1 ferredoxin-dependent assimilatory nitrite reductase YP_001754978.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; KEGG: mex:Mext_4493 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001754979.1 KEGG: mex:Mext_4497 putative nitrate transport protein YP_001754980.1 PFAM: response regulator receiver; ANTAR domain protein; KEGG: mex:Mext_4498 ANTAR domain protein YP_001754981.1 KEGG: mex:Mext_4499 hypothetical protein YP_001754982.1 PFAM: glycoside hydrolase 15-related; KEGG: mex:Mext_4500 glycoside hydrolase 15-related YP_001754983.1 TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: mex:Mext_4501 transketolase YP_001754984.1 catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate; catalyzes isomerization of glucose 6-phosphate and fructose 6-phosphate YP_001754985.1 similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate YP_001754986.1 TIGRFAM: 6-phosphogluconolactonase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: mex:Mext_4827 6-phosphogluconolactonase YP_001754987.1 PFAM: cysteine dioxygenase type I; KEGG: bbr:BB1170 hypothetical protein YP_001754988.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: azc:AZC_2773 transcriptional regulator YP_001754989.1 Catalyzes the deamination of dCTP to form dUTP YP_001754990.1 protein associated with Co2+ and Mg2+ efflux YP_001754991.1 TIGRFAM: acetylornithine deacetylase (ArgE); PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: mex:Mext_0369 acetylornithine deacetylase (ArgE) YP_001754992.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_2705 GCN5-related N-acetyltransferase YP_001754993.1 KEGG: mex:Mext_3840 tetratricopeptide TPR_4 YP_001754994.1 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers YP_001754995.1 TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: mex:Mext_4076 ornithine carbamoyltransferase YP_001754996.1 TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: mex:Mext_4075 acetylornithine and succinylornithine aminotransferase YP_001754997.1 PFAM: Endoribonuclease L-PSP; KEGG: mex:Mext_4070 endoribonuclease L-PSP YP_001754998.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: mex:Mext_4069 glycerophosphoryl diester phosphodiesterase YP_001754999.1 PFAM: protein of unknown function DUF1311; KEGG: pfl:PFL_4116 hypothetical protein YP_001755000.1 PFAM: protein of unknown function DUF482; KEGG: mex:Mext_4316 protein of unknown function DUF482 YP_001755001.1 KEGG: mex:Mext_4317 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_001755003.1 PFAM: PAS fold-3 domain protein; KEGG: mex:Mext_4512 hypothetical protein YP_001755004.1 KEGG: mlo:mll7595 hypothetical protein YP_001755005.1 PFAM: TadE family protein; KEGG: hne:HNE_0759 TadE-like family protein YP_001755006.1 KEGG: mex:Mext_3635 molybdate ABC transporter, ATPase subunit; TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain protein; SMART: AAA ATPase YP_001755007.1 PFAM: Glutathione S-transferase domain; KEGG: mex:Mext_3634 glutathione S-transferase domain YP_001755008.1 TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_3633 molybdate ABC transporter, inner membrane subunit YP_001755009.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: mex:Mext_4477 molybdenum ABC transporter, periplasmic molybdate-binding protein YP_001755012.1 PFAM: ribosomal L11 methyltransferase; Methyltransferase type 11; KEGG: mex:Mext_4479 ribosomal L11 methyltransferase YP_001755013.1 KEGG: mex:Mext_3786 hypothetical protein YP_001755015.1 PFAM: creatinase; peptidase M24; KEGG: mex:Mext_4480 peptidase M24 YP_001755016.1 KEGG: mex:Mext_4281 thiol:disulfide interchange protein, putative YP_001755017.1 TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_4718 phosphate regulon transcriptional regulatory protein PhoB YP_001755018.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: mex:Mext_4717 phosphate transport system regulatory protein PhoU YP_001755019.1 KEGG: mex:Mext_4716 phosphate ABC transporter, ATPase subunit; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_001755020.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_4715 phosphate ABC transporter, inner membrane subunit PstA YP_001755021.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_4714 phosphate ABC transporter, inner membrane subunit PstC YP_001755022.1 TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: mex:Mext_4713 phosphate ABC transporter, periplasmic phosphate-binding protein YP_001755023.1 KEGG: mex:Mext_4712 hypothetical protein YP_001755024.1 KEGG: mex:Mext_4711 hypothetical protein YP_001755025.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: mex:Mext_2954 DNA repair protein RecN YP_001755026.1 KEGG: mex:Mext_2951 putative lipoprotein YP_001755027.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis YP_001755028.1 TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: mex:Mext_2949 cell division protein FtsZ YP_001755029.1 PFAM: cell division protein FtsA; KEGG: mex:Mext_2948 cell division protein FtsA YP_001755030.1 PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: mex:Mext_2947 polypeptide-transport-associated domain protein FtsQ-type YP_001755031.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli YP_001755032.1 KEGG: mex:Mext_2945 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase domain protein YP_001755033.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis YP_001755034.1 KEGG: mex:Mext_2941 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain YP_001755035.1 PFAM: cell cycle protein; KEGG: mex:Mext_2940 cell cycle protein YP_001755036.1 KEGG: bbt:BBta_6268 putative methyl-accepting chemotaxis receptor/sensory transducer with PAS domain; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001755037.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation YP_001755038.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan YP_001755039.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: mex:Mext_4637 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase YP_001755040.1 TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: mex:Mext_4638 UDP-N-acetylmuramyl-tripeptide synthetase YP_001755041.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: mex:Mext_4639 peptidoglycan glycosyltransferase YP_001755042.1 KEGG: mex:Mext_4640 putative exported protein of unknown function YP_001755043.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: mex:Mext_4641 S-adenosyl-methyltransferase MraW YP_001755044.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mex:Mext_0440 glyoxalase/bleomycin resistance protein/dioxygenase YP_001755045.1 PFAM: acyltransferase 3; KEGG: mlo:mll5285 hypothetical protein YP_001755046.1 TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: mex:Mext_0542 aminopeptidase N YP_001755047.1 KEGG: mex:Mext_0543 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001755050.1 KEGG: mex:Mext_0986 hypothetical protein YP_001755051.1 PFAM: polysaccharide biosynthesis protein; KEGG: mex:Mext_0987 polysaccharide biosynthesis protein YP_001755052.1 KEGG: mex:Mext_0988 hypothetical protein YP_001755053.1 KEGG: mex:Mext_0989 OpgC protein YP_001755054.1 KEGG: mex:Mext_2633 hypothetical protein YP_001755055.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: mex:Mext_2395 glucose-1-phosphate thymidylyltransferase YP_001755056.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_3692 dTDP-4-dehydrorhamnose reductase YP_001755057.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_3691 dTDP-glucose 4,6-dehydratase YP_001755058.1 KEGG: mex:Mext_3690 dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related YP_001755059.1 KEGG: mex:Mext_2925 hypothetical protein YP_001755060.1 KEGG: mex:Mext_1221 hypothetical protein YP_001755061.1 PFAM: beta-lactamase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: mex:Mext_1220 serine-type D-Ala-D-Ala carboxypeptidase YP_001755062.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: mex:Mext_1219 cobalamin synthesis protein P47K YP_001755063.1 KEGG: ade:Adeh_4027 hypothetical protein YP_001755064.1 KEGG: mex:Mext_0586 endonuclease III; PFAM: HhH-GPD family protein; SMART: iron-sulfur cluster loop YP_001755065.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphocarrier HPr protein; KEGG: mex:Mext_1234 phosphocarrier, HPr family YP_001755066.1 PFAM: protein of unknown function DUF490; KEGG: mex:Mext_2766 protein of unknown function DUF490 YP_001755067.1 PFAM: surface antigen (D15); KEGG: mex:Mext_2765 surface antigen (D15) YP_001755068.1 PFAM: Peptidase M23; KEGG: mex:Mext_1023 peptidase M23B YP_001755069.1 PFAM: glutamyl-tRNA synthetase class Ic; KEGG: mex:Mext_1025 glutamyl-tRNA synthetase class Ic YP_001755070.1 KEGG: mex:Mext_1026 hypothetical protein YP_001755071.1 KEGG: mex:Mext_4428 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein YP_001755072.1 PFAM: glucose-methanol-choline oxidoreductase; KEGG: acr:Acry_3135 glucose-methanol-choline oxidoreductase YP_001755073.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_4518 LysR substrate-binding YP_001755074.1 KEGG: mex:Mext_1130 hypothetical protein YP_001755075.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bja:blr4023 acetolactate synthase YP_001755076.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: rle:pRL100103 putative alcohol dehydrogenase YP_001755077.1 KEGG: rle:pRL100104 hypothetical protein YP_001755078.1 TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit; PFAM: alpha/beta hydrolase fold; KEGG: rle:pRL100105 putative polyhydroxyalkanoate synthase subunit C YP_001755079.1 PFAM: coenzyme A transferase; KEGG: reu:Reut_A1494 coenzyme A transferase YP_001755080.1 TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: mes:Meso_1323 succinic semialdehyde dehydrogenase YP_001755081.1 KEGG: mex:Mext_3592 hypothetical protein YP_001755082.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bja:blr3854 hypothetical protein YP_001755083.1 PFAM: protein of unknown function DUF1656; KEGG: bxe:Bxe_B2613 hypothetical protein YP_001755084.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: bra:BRADO4669 putative efflux transporter permease; putative fusaric acid resistance pump YP_001755085.1 PFAM: regulatory protein MarR; KEGG: bmu:Bmul_6147 transcriptional regulator, MarR family YP_001755086.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: mex:Mext_4220 response regulator receiver YP_001755087.1 TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: mex:Mext_1339 PQQ-dependent dehydrogenase, methanol/ethanol family YP_001755088.1 SMART: extracellular solute-binding protein family 3; KEGG: mex:Mext_1338 extracellular solute-binding protein family 3 YP_001755089.1 KEGG: mex:Mext_1337 cytochrome c550 YP_001755090.1 KEGG: mex:Mext_1336 hypothetical protein YP_001755091.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: mex:Mext_1335 40-residue YVTN family beta-propeller repeat protein YP_001755092.1 PFAM: FMN-binding domain protein; KEGG: mex:Mext_1334 FMN-binding domain protein YP_001755093.1 PFAM: ApbE family lipoprotein; KEGG: mex:Mext_1333 ApbE family lipoprotein YP_001755094.1 PFAM: beta-lactamase; KEGG: bpt:Bpet2414 hypothetical protein YP_001755095.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bja:blr7006 probable carboxypeptidase G2 YP_001755096.1 TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); KEGG: mex:Mext_4157 glucosamine--fructose-6-phosphate aminotransferase, isomerizing YP_001755097.1 TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: mex:Mext_4156 UDP-N-acetylglucosamine pyrophosphorylase YP_001755098.1 TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor core-binding region; sigma-54 DNA-binding domain protein; KEGG: mex:Mext_2501 RNA polymerase sigma-54 factor, RpoN YP_001755099.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: mex:Mext_0789 cyclic nucleotide-binding YP_001755103.1 involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan YP_001755104.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; electron transport protein SCO1/SenC; KEGG: ccr:CC_3503 SCO1/2 family protein YP_001755105.1 PFAM: beta-lactamase domain protein; KEGG: mex:Mext_4154 beta-lactamase domain protein YP_001755106.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: ccr:CC_3094 sensory box/GGDEF family protein YP_001755107.1 PFAM: helix-turn-helix domain protein; KEGG: mex:Mext_1041 helix-turn-helix domain protein YP_001755108.1 KEGG: mex:Mext_0066 hypothetical protein YP_001755110.1 TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: psb:Psyr_0771 peptidase M20:peptidase M20 YP_001755111.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mex:Mext_2763 cyclic nucleotide-binding YP_001755112.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_4511 glycosyl transferase group 1 YP_001755113.1 PFAM: Rhodanese domain protein; KEGG: mex:Mext_4510 rhodanese domain protein YP_001755114.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_4509 efflux transporter, RND family, MFP subunit YP_001755115.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mex:Mext_4508 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family YP_001755116.1 KEGG: mex:Mext_1660 hypothetical protein YP_001755117.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: mex:Mext_1756 phospholipid/glycerol acyltransferase YP_001755118.1 KEGG: mex:Mext_1589 hypothetical protein YP_001755119.1 KEGG: mex:Mext_1590 conserved hypothetical protein YP_001755120.1 PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: mex:Mext_0177 phosphoribosylanthranilate isomerase YP_001755121.1 KEGG: mex:Mext_0178 hypothetical protein YP_001755122.1 TIGRFAM: integration host factor, beta subunit; PFAM: histone family protein DNA-binding protein; KEGG: mex:Mext_0179 integration host factor, beta subunit YP_001755123.1 TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: mex:Mext_0180 signal peptide peptidase SppA, 36K type YP_001755124.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins YP_001755125.1 PFAM: cyclic nucleotide-binding; KEGG: bbt:BBta_0859 putative transcriptional regulator protein, Fnr/CRP family YP_001755126.1 PFAM: transglutaminase domain protein; KEGG: mex:Mext_2611 transglutaminase domain protein YP_001755127.1 PFAM: amino acid-binding ACT domain protein; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: azc:AZC_3025 D-3-phosphoglycerate dehydrogenase YP_001755128.1 KEGG: mex:Mext_4647 hypothetical protein YP_001755130.1 KEGG: mex:Mext_4422 hypothetical protein YP_001755131.1 KEGG: mxa:MXAN_0441 hypothetical protein YP_001755132.1 KEGG: mex:Mext_1029 hypothetical protein YP_001755133.1 PFAM: NADPH-dependent FMN reductase; KEGG: mex:Mext_2378 NADPH-dependent FMN reductase YP_001755134.1 KEGG: spn:SP_1772 cell wall surface anchor family protein YP_001755137.1 KEGG: mex:Mext_1230 hypothetical protein YP_001755138.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_1018 short-chain dehydrogenase/reductase SDR YP_001755139.1 KEGG: mex:Mext_1229 hypothetical protein YP_001755140.1 KEGG: mex:Mext_3926 hypothetical protein YP_001755142.1 KEGG: mex:Mext_3209 hypothetical protein YP_001755146.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: azc:AZC_4440 putative methyl-accepting chemotaxis protein YP_001755147.1 PFAM: Urease accessory protein UreD; KEGG: mex:Mext_3020 urease accessory protein UreD YP_001755148.1 TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: mex:Mext_0544 arginase YP_001755149.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_0809 chemotaxis sensory transducer YP_001755150.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mex:Mext_3773 ATP-binding region ATPase domain protein YP_001755151.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_3772 response regulator receiver YP_001755152.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_4266 acyl-CoA dehydrogenase domain protein YP_001755153.1 PFAM: glycoside hydrolase 15-related; KEGG: mex:Mext_4323 glycoside hydrolase 15-related YP_001755154.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: mex:Mext_3748 Rieske (2Fe-2S) domain protein YP_001755155.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mex:Mext_3747 oxidoreductase FAD-binding domain protein YP_001755156.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: mex:Mext_3746 NADH:flavin oxidoreductase/NADH oxidase YP_001755157.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: mex:Mext_3745 protein of unknown function DUF224 cysteine-rich region domain protein YP_001755158.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: mex:Mext_3744 electron transfer flavoprotein alpha subunit YP_001755159.1 KEGG: mex:Mext_3743 electron transfer flavoprotein beta-subunit YP_001755160.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: mex:Mext_3742 YbaK/prolyl-tRNA synthetase associated region YP_001755161.1 KEGG: mex:Mext_3740 L-serine dehydratase 1; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain YP_001755162.1 PFAM: Sarcosine oxidase gamma subunit; KEGG: mex:Mext_3739 sarcosine oxidase gamma subunit YP_001755163.1 TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: FAD dependent oxidoreductase; glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: mex:Mext_3738 sarcosine oxidase, alpha subunit family YP_001755164.1 TIGRFAM: sarcosine oxidase, delta subunit family; PFAM: Sarcosine oxidase delta subunit heterotetrameric; KEGG: mex:Mext_3737 sarcosine oxidase, delta subunit family YP_001755165.1 TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase; KEGG: mex:Mext_3736 sarcosine oxidase, beta subunit family YP_001755166.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: mex:Mext_3735 helix-turn-helix-domain containing protein AraC type YP_001755167.1 KEGG: mex:Mext_3734 putative signal peptide YP_001755168.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: mex:Mext_3733 substrate-binding region of ABC-type glycine betaine transport system YP_001755169.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_3732 binding-protein-dependent transport systems inner membrane component YP_001755170.1 KEGG: mex:Mext_3731 glycine betaine/L-proline ABC transporter, ATPase subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase YP_001755171.1 PFAM: adenylate cyclase; KEGG: mex:Mext_3082 adenylate cyclase YP_001755174.1 KEGG: bra:BRADO0462 putative phage related integrase YP_001755177.1 PFAM: response regulator receiver; KEGG: mex:Mext_1895 response regulator receiver YP_001755178.1 KEGG: mex:Mext_1246 hypothetical protein YP_001755179.1 KEGG: mex:Mext_1246 hypothetical protein YP_001755182.1 KEGG: rpd:RPD_2182 hypothetical protein YP_001755184.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_3216 metallophosphoesterase YP_001755192.1 KEGG: mxa:MXAN_0148 hypothetical protein YP_001755194.1 KEGG: oan:Oant_1518 hypothetical protein YP_001755195.1 KEGG: lma:LmjF34.2560 hypothetical protein, conserved YP_001755196.1 KEGG: tcr:508175.309 60S ribosomal protein L19 YP_001755197.1 KEGG: ade:Adeh_2705 response regulator receiver YP_001755199.1 KEGG: ajs:Ajs_2216 hypothetical protein YP_001755200.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: gur:Gura_3924 filamentation induced by cAMP protein Fic YP_001755201.1 PFAM: protein of unknown function DUF1289; KEGG: hne:HNE_2096 hypothetical protein YP_001755202.1 PFAM: protein of unknown function DUF156; KEGG: xau:Xaut_3401 protein of unknown function DUF156 YP_001755203.1 PFAM: high-affinity nickel-transporter; KEGG: xau:Xaut_3402 high-affinity nickel-transporter YP_001755204.1 PFAM: Heavy metal transport/detoxification protein; KEGG: mag:amb1810 copper chaperone YP_001755205.1 KEGG: mex:Mext_2833 conserved hypothetical protein; putative esterase/lipase/thioesterase domains YP_001755206.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: mex:Mext_2832 efflux transporter, RND family, MFP subunit YP_001755207.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: mex:Mext_2831 acriflavin resistance protein YP_001755208.1 KEGG: mex:Mext_2830 hypothetical protein YP_001755209.1 PFAM: protein of unknown function DUF305; KEGG: mex:Mext_2829 protein of unknown function DUF305 YP_001755210.1 KEGG: mmu:74175 cysteine-rich C-terminal 1 YP_001755211.1 TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: mes:Meso_3892 transcriptional regulator, MerR family YP_001755212.1 PFAM: glutaredoxin; KEGG: sme:SMa0280 hypothetical protein YP_001755213.1 KEGG: bth:BT_0786 putative integral membrane protein YP_001755215.1 KEGG: mex:Mext_2383 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; type IV pilus assembly PilZ; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001755216.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: xau:Xaut_4351 GntR domain protein YP_001755217.1 TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: bov:BOV_0710 L-lactate permease YP_001755218.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: sme:SMc01712 putative L-lactate dehydrogenase (cytochrome) protein YP_001755219.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_4691 chemotaxis sensory transducer YP_001755221.1 PFAM: Radical SAM domain protein; KEGG: bbt:BBta_3378 hypothetical protein YP_001755222.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; HI0933 family protein; FAD dependent oxidoreductase; KEGG: eli:ELI_00350 mercuric reductase, putative YP_001755223.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: eli:ELI_00355 hypothetical protein YP_001755224.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: eli:ELI_00360 hypothetical protein YP_001755225.1 PFAM: glycosyl transferase family 2; KEGG: eli:ELI_00365 hypothetical protein YP_001755226.1 KEGG: eli:ELI_00370 hypothetical protein YP_001755227.1 PFAM: fatty acid hydroxylase; KEGG: lpn:lpg2102 sterol desaturase YP_001755229.1 PFAM: protein of unknown function DUF302; KEGG: bcs:BCAN_A1397 camphor resistance protein CrcB YP_001755230.1 KEGG: pat:Patl_1751 hypothetical protein YP_001755231.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: dar:Daro_1912 hypothetical protein YP_001755232.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: bbt:BBta_3390 putative cytochrome c-type biogenesis protein YP_001755233.1 PFAM: Thioredoxin domain; KEGG: bbt:BBta_3389 putative thioredoxin (H-type,TRX-H) YP_001755234.1 KEGG: sus:Acid_3833 hypothetical protein YP_001755235.1 KEGG: bbt:BBta_3388 putative membrane protein of unknown function YP_001755236.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: bbt:BBta_3387 putative RNA polymerase ECF-type sigma factor YP_001755237.1 TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rrs:RoseRS_3515 haloacid dehalogenase, type II YP_001755238.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: sme:SMa1163 putative cation transport P-type ATPase YP_001755239.1 PFAM: UspA domain protein; KEGG: mex:Mext_1355 UspA domain protein YP_001755240.1 PFAM: cytochrome c class I; KEGG: bbt:BBta_5747 hypothetical protein YP_001755241.1 PFAM: BLUF domain protein; KEGG: swi:Swit_4662 BLUF domain protein YP_001755242.1 PFAM: Integrase catalytic region; KEGG: mgm:Mmc1_1989 integrase, catalytic region YP_001755243.1 PFAM: transposase IS3/IS911 family protein; KEGG: azc:AZC_3852 transposase YP_001755245.1 PFAM: NnrS family protein; KEGG: rpc:RPC_1235 NnrS YP_001755246.1 PFAM: protein of unknown function DUF59; KEGG: tfu:Tfu_1981 hypothetical protein YP_001755247.1 KEGG: eba:ebA6257 hypothetical protein YP_001755248.1 PFAM: NnrUfamily protein; KEGG: atc:AGR_L_945 hypothetical protein YP_001755249.1 KEGG: mex:Mext_3507 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001755250.1 response regulator for histidine kinase FixL; part of global network that controls expression of aerobic respiratory terminal oxidases and carbon and nitrogen metabolic enzymes YP_001755251.1 PFAM: response regulator receiver; KEGG: azc:AZC_4656 response regulator receiver YP_001755252.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bra:BRADO2432 transcriptional regulator FixK YP_001755253.1 KEGG: mex:Mext_1764 hypothetical protein YP_001755254.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: rsh:Rsph17029_3776 molybdenum cofactor synthesis domain YP_001755255.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: rpc:RPC_4554 molybdenum cofactor biosynthesis protein YP_001755256.1 KEGG: azc:AZC_0899 molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB YP_001755258.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: azc:AZC_1429 putative peptidyl-prolyl cis-trans isomerase YP_001755259.1 KEGG: azc:AZC_1428 nitrate reductase gamma subunit protein; TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase gamma subunit YP_001755260.1 TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; PFAM: Nitrate reductase delta subunit; KEGG: pde:Pden_4234 nitrate reductase molybdenum cofactor assembly chaperone YP_001755261.1 TIGRFAM: nitrate reductase, beta subunit; KEGG: azc:AZC_1426 nitrate reductase beta subunit protein YP_001755262.1 KEGG: azc:AZC_1425 nitrate reductase alpha subunit protein; TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region YP_001755263.1 PFAM: major facilitator superfamily MFS_1; KEGG: stp:Strop_0175 nitrate/nitrite transporter-like protein YP_001755264.1 PFAM: major facilitator superfamily MFS_1; KEGG: hne:HNE_1559 nitrite extrusion protein YP_001755265.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: acr:Acry_1580 putative transcriptional regulator, Crp/Fnr family YP_001755266.1 flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine YP_001755267.1 PFAM: PAS fold-3 domain protein; SMART: PAC repeat-containing protein; KEGG: ana:all0824 two-component hybrid sensor and regulator YP_001755268.1 PFAM: UspA domain protein; KEGG: mex:Mext_3504 UspA domain protein YP_001755269.1 KEGG: mex:Mext_1970 hypothetical protein YP_001755270.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: pin:Ping_2670 ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_001755271.1 KEGG: bbt:BBta_0349 hypothetical protein YP_001755272.1 KEGG: mlo:mll6593 hypothetical protein YP_001755273.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; magnesium-translocating P-type ATPase; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: xau:Xaut_0631 magnesium-translocating P-type ATPase YP_001755274.1 PFAM: protein of unknown function DUF1476; KEGG: nwi:Nwi_1303 protein of unknown function DUF1476 YP_001755275.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: rle:RL1878 putative peptidoglycan binding protein YP_001755276.1 KEGG: azc:AZC_3568 hypothetical protein YP_001755278.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mes:Meso_1485 cyclic nucleotide-binding protein YP_001755279.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: rru:Rru_A1467 acetate kinase YP_001755280.1 PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: bja:bll2518 putative phosphoketolase YP_001755281.1 KEGG: mex:Mext_3503 hypothetical protein YP_001755282.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: ret:RHE_PD00022 hypothetical protein YP_001755283.1 TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bcs:BCAN_A1076 zinc-binding alcohol dehydrogenase family protein YP_001755284.1 PFAM: transposase mutator type; KEGG: bja:bll1779 putative transposase YP_001755285.1 PFAM: UspA domain protein; KEGG: mex:Mext_1355 UspA domain protein YP_001755286.1 PFAM: cytochrome c class I; KEGG: mex:Mext_1356 cytochrome c class I YP_001755287.1 PFAM: UspA domain protein; KEGG: mag:amb1529 universal stress protein UspA and related nucleotide-binding protein YP_001755289.1 PFAM: UspA domain protein; KEGG: mex:Mext_3500 UspA domain protein YP_001755290.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: ret:RHE_PD00022 hypothetical protein YP_001755291.1 KEGG: ccr:CC_3058 response regulator/sensor histidine kinase YP_001755292.1 KEGG: bxe:Bxe_C0750 Mn2+/Fe2+ transporter, NRAMP family YP_001755293.1 PFAM: Ion transport 2 domain protein; KEGG: eli:ELI_00280 hypothetical protein YP_001755294.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: swi:Swit_0841 biotin/lipoyl attachment domain-containing protein YP_001755295.1 KEGG: mes:Meso_2143 SPW repeat YP_001755296.1 KEGG: rpb:RPB_4640 putative cytochrome c552 precursor YP_001755297.1 PFAM: UspA domain protein; KEGG: mex:Mext_0489 UspA domain protein YP_001755298.1 KEGG: gga:416851 SET domain containing 1B YP_001755299.1 KEGG: gdi:GDI1281 hypothetical protein YP_001755300.1 PFAM: Integrase catalytic region; KEGG: ret:RHE_PA00091 probable insertion sequence transposase protein YP_001755301.1 PFAM: transposase IS3/IS911 family protein; KEGG: yps:pYV0018 putative transposase YP_001755304.1 KEGG: nha:Nham_0139 hypothetical protein YP_001755305.1 KEGG: ade:Adeh_0935 zinc finger/thioredoxin putative YP_001755306.1 KEGG: mex:Mext_0356 hypothetical protein YP_001755309.1 PFAM: glycoside hydrolase family 24; KEGG: ret:RHE_CH01113 putative lysozyme protein YP_001755313.1 KEGG: bpt:Bpet4401 hypothetical protein YP_001755319.1 TIGRFAM: phage regulatory protein, Rha family; PFAM: regulatory protein Rha family; KEGG: sgl:SG0933 hypothetical protein YP_001755320.1 KEGG: tcr:506303.80 hypothetical protein Pfam: Spb1_C CRA_rpt PROSITE: ALA_RICH GLU_RICH LYS_RICH YP_001755324.1 KEGG: bja:blr7723 hypothetical protein YP_001755327.1 KEGG: rsp:RSP_4074 hypothetical protein YP_001755329.1 KEGG: gga:770941 hypothetical protein LOC770941 YP_001755330.1 KEGG: dol:Dole_0902 hypothetical protein YP_001755332.1 KEGG: bbt:BBta_p0289 hypothetical protein YP_001755333.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis YP_001755334.1 KEGG: rle:RL1068 hypothetical protein YP_001755335.1 PFAM: carbonic anhydrase; KEGG: bbt:BBta_6172 putative carbonic anhydrase YP_001755336.1 KEGG: mex:Mext_2524 3-isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_001755337.1 TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mex:Mext_3929 ubiquinone/menaquinone biosynthesis methyltransferase YP_001755338.1 TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain protein; KEGG: mex:Mext_3928 2-polyprenylphenol 6-hydroxylase YP_001755339.1 KEGG: mex:Mext_4217 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE3 domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001755340.1 PFAM: AFG1-family ATPase; KEGG: mex:Mext_0934 AFG1-family ATPase YP_001755341.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_0930 GCN5-related N-acetyltransferase YP_001755342.1 KEGG: mex:Mext_0307 competence protein F YP_001755343.1 KEGG: bbt:BBta_1778 putative exported protein of unknown function YP_001755344.1 PFAM: Methyltransferase type 11; KEGG: mex:Mext_0309 methyltransferase type 11 YP_001755345.1 PFAM: protein of unknown function DUF427; KEGG: mex:Mext_0310 protein of unknown function DUF427 YP_001755346.1 KEGG: mex:Mext_0311 hypothetical protein YP_001755347.1 KEGG: mex:Mext_0318 hypothetical protein YP_001755349.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_0426 short-chain dehydrogenase/reductase SDR YP_001755351.1 FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP YP_001755352.1 catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP YP_001755353.1 PFAM: ferric-uptake regulator; KEGG: mex:Mext_0423 ferric-uptake regulator YP_001755354.1 PFAM: protein of unknown function DUF1058; KEGG: mex:Mext_0422 protein of unknown function DUF1058 YP_001755355.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: mex:Mext_0421 glyoxylate reductase YP_001755356.1 PFAM: cyclic nucleotide-binding; KEGG: mex:Mext_0576 cyclic nucleotide-binding YP_001755357.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_0575 amine oxidase YP_001755358.1 PFAM: protein of unknown function DUF540; KEGG: mex:Mext_0573 protein of unknown function DUF540 YP_001755359.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_3855 efflux transporter, RND family, MFP subunit YP_001755360.1 KEGG: mex:Mext_2774 diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein YP_001755361.1 KEGG: mex:Mext_1996 phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase class II YP_001755362.1 KEGG: mex:Mext_2955 hypothetical protein YP_001755363.1 TIGRFAM: glutathione-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: mex:Mext_2301 pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_001755364.1 PFAM: O-antigen polymerase; KEGG: mex:Mext_2300 O-antigen polymerase YP_001755365.1 KEGG: mex:Mext_2299 hypothetical protein YP_001755366.1 KEGG: mex:Mext_2298 ribose 5-phosphate isomerase; TIGRFAM: ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase YP_001755367.1 KEGG: mex:Mext_2297 hypothetical protein YP_001755368.1 TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mex:Mext_2296 phosphoglycolate phosphatase YP_001755369.1 PFAM: aminotransferase class I and II; KEGG: mex:Mext_3658 aminotransferase class I and II YP_001755370.1 PFAM: DSBA oxidoreductase; KEGG: mex:Mext_3655 DsbA oxidoreductase YP_001755371.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: mex:Mext_1095 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_001755372.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: mex:Mext_1096 acetyl-CoA carboxylase, biotin carboxylase YP_001755373.1 PFAM: leucyl/phenylalanyl-tRNA--protein transferase; KEGG: mex:Mext_1097 leucyltransferase YP_001755374.1 KEGG: mex:Mext_1605 hypothetical protein YP_001755375.1 KEGG: mex:Mext_1606 hypothetical protein YP_001755376.1 PFAM: cytochrome oxidase assembly; KEGG: mex:Mext_1607 cytochrome oxidase assembly YP_001755377.1 PFAM: Hly-III family protein; KEGG: mex:Mext_1608 Hly-III family protein YP_001755378.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_1857 glycosyl transferase group 1 YP_001755379.1 KEGG: mex:Mext_1856 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase YP_001755380.1 KEGG: mex:Mext_1855 hypothetical protein YP_001755381.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rpe:RPE_2818 TonB-dependent receptor YP_001755382.1 KEGG: mex:Mext_1852 hypothetical protein YP_001755383.1 PFAM: ABC-2 type transporter; KEGG: mex:Mext_1851 ABC-2 type transporter YP_001755384.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_1850 ABC transporter related YP_001755385.1 KEGG: mex:Mext_1849 hypothetical protein YP_001755386.1 KEGG: mex:Mext_1848 hypothetical protein YP_001755387.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: mex:Mext_1847 40-residue YVTN family beta-propeller repeat protein YP_001755388.1 KEGG: mex:Mext_1846 putative exported protein of unknown function YP_001755389.1 KEGG: mex:Mext_1845 hypothetical protein YP_001755390.1 KEGG: mex:Mext_1844 hypothetical protein YP_001755391.1 KEGG: mex:Mext_1843 aspartate/glutamate/uridylate kinase YP_001755392.1 PFAM: dihydropteroate synthase DHPS; KEGG: mex:Mext_1842 dihydropteroate synthase DhpS YP_001755393.1 KEGG: mex:Mext_1841 hypothetical protein YP_001755394.1 KEGG: mex:Mext_1839 conserved hypothetical protein; putative signal peptide YP_001755395.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: NHL repeat containing protein; KEGG: mex:Mext_1838 40-residue YVTN family beta-propeller repeat protein YP_001755396.1 KEGG: mex:Mext_3450 hypothetical protein YP_001755397.1 KEGG: mex:Mext_3448 hypothetical protein YP_001755399.1 PFAM: response regulator receiver; KEGG: mex:Mext_4573 response regulator receiver YP_001755400.1 PFAM: dienelactone hydrolase; KEGG: azc:AZC_0916 dienelactone hydrolase YP_001755401.1 KEGG: mex:Mext_4549 hypothetical protein YP_001755402.1 PFAM: protein of unknown function DUF192; KEGG: mex:Mext_3008 protein of unknown function DUF192 YP_001755403.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mex:Mext_3007 cold-shock protein DNA-binding YP_001755404.1 PFAM: protein of unknown function DUF1624; KEGG: mex:Mext_3006 protein of unknown function DUF1624 YP_001755405.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA YP_001755406.1 PFAM: tRNA synthetase class II (D K and N); KEGG: mex:Mext_3004 tRNA synthetase class II (D K and N) YP_001755407.1 KEGG: mex:Mext_3003 lysine 2,3-aminomutase YodO family protein; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein YP_001755408.1 PFAM: Glutathione S-transferase domain; KEGG: mex:Mext_3002 glutathione S-transferase domain YP_001755409.1 KEGG: acr:Acry_2471 dimethylmenaquinone methyltransferase YP_001755410.1 PFAM: protein of unknown function DUF218; KEGG: mex:Mext_3001 protein of unknown function DUF218 YP_001755411.1 KEGG: mex:Mext_3000 hypothetical protein YP_001755412.1 PFAM: protein of unknown function DUF599; KEGG: mex:Mext_2999 protein of unknown function DUF599 YP_001755413.1 PFAM: acylphosphatase; KEGG: bja:bsl5265 putative acylphosphatase YP_001755414.1 PFAM: formate/nitrite transporter; KEGG: tbd:Tbd_1943 putativel formate transporter YP_001755415.1 PFAM: AIG2 family protein; KEGG: mex:Mext_2997 AIG2 family protein YP_001755417.1 PFAM: biotin/lipoyl attachment domain-containing protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: mex:Mext_2996 carbamoyl-phosphate synthase L chain ATP-binding YP_001755418.1 KEGG: mex:Mext_2995 hypothetical protein YP_001755419.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2994 ErfK/YbiS/YcfS/YnhG family protein YP_001755420.1 PFAM: histone deacetylase superfamily; KEGG: mex:Mext_2993 histone deacetylase superfamily YP_001755421.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: mlo:mll4618 hypothetical protein YP_001755422.1 TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: mex:Mext_2991 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_001755423.1 TIGRFAM: death-on-curing family protein; KEGG: gox:GOX1840 hypothetical protein YP_001755424.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis YP_001755425.1 KEGG: mex:Mext_2989 hypothetical protein YP_001755426.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling YP_001755427.1 KEGG: mex:Mext_2987 tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_001755428.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_0237 response regulator receiver YP_001755429.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: mex:Mext_3401 sec-independent protein translocase, TatC subunit YP_001755430.1 TIGRFAM: twin-arginine translocation protein, TatB subunit; KEGG: mex:Mext_3400 twin-arginine translocation protein, TatB subunit YP_001755431.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes YP_001755432.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: mex:Mext_3398 beta-N-acetylhexosaminidase YP_001755433.1 PFAM: Sporulation domain protein; KEGG: mex:Mext_3397 sporulation domain protein YP_001755434.1 KEGG: mex:Mext_3396 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase YP_001755435.1 KEGG: mex:Mext_3394 hypothetical protein YP_001755436.1 KEGG: mex:Mext_3393 deoxyguanosinetriphosphate triphosphohydrolase; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_001755437.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: mex:Mext_3392 iron-sulfur cluster assembly accessory protein YP_001755438.1 KEGG: mex:Mext_3391 hypothetical protein YP_001755439.1 KEGG: oan:Oant_1708 hypothetical protein YP_001755440.1 PFAM: major facilitator superfamily MFS_1; KEGG: xcv:XCV2334 putative major facilitator superfamily protein YP_001755441.1 KEGG: smd:Smed_2258 hypothetical protein YP_001755442.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_1808 ABC transporter related YP_001755443.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_1807 binding-protein-dependent transport systems inner membrane component YP_001755444.1 KEGG: mex:Mext_1806 putative ABC transporter periplasmic solute-binding protein YP_001755445.1 PFAM: transcriptional coactivator/pterin dehydratase; KEGG: mex:Mext_1805 transcriptional coactivator/pterin dehydratase YP_001755446.1 KEGG: mex:Mext_3447 hypothetical protein YP_001755447.1 PFAM: acriflavin resistance protein; KEGG: mex:Mext_4339 acriflavin resistance protein YP_001755448.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: mex:Mext_4340 efflux transporter, RND family, MFP subunit YP_001755449.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_4341 efflux transporter, RND family, MFP subunit YP_001755450.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_4342 regulatory protein TetR YP_001755451.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; KEGG: mex:Mext_4873 histidine kinase dimerisation/phosphoacceptor YP_001755452.1 PFAM: response regulator receiver; KEGG: mex:Mext_4874 response regulator receiver YP_001755453.1 KEGG: mex:Mext_4875 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; MHYT domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAC repeat-containing protein YP_001755454.1 KEGG: tcr:509269.4 Tb-291 membrane-associated protein-like Pfam: Plasmodium_HRP Vicilin_N PROSITE: ALA_RICH ARG_RICH GLU_RICH YP_001755455.1 KEGG: mex:Mext_3031 hypothetical protein YP_001755456.1 TIGRFAM: formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mex:Mext_1217 formyl-CoA transferase YP_001755457.1 PFAM: formyl transferase domain protein; KEGG: pnu:Pnuc_0641 methionyl-tRNA formyltransferase YP_001755458.1 PFAM: class II aldolase/adducin family protein; KEGG: mex:Mext_4772 L-fuculose-phosphate aldolase YP_001755459.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_1212 major facilitator superfamily MFS_1 YP_001755460.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mex:Mext_1218 GntR domain protein YP_001755462.1 KEGG: mex:Mext_3923 metal dependent phophohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region YP_001755463.1 PFAM: SCP-like extracellular; KEGG: mex:Mext_1086 SCP-like extracellular YP_001755464.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: mex:Mext_2762 single-stranded-DNA-specific exonuclease RecJ YP_001755465.1 PFAM: NAD(P) transhydrogenase beta subunit; KEGG: mex:Mext_2761 NAD(P)(+) transhydrogenase (AB-specific) YP_001755466.1 KEGG: mex:Mext_2760 PntAB, NAD(P) transhydrogenase, alpha2 subunit YP_001755467.1 PFAM: alanine dehydrogenase/PNT domain protein; KEGG: mex:Mext_2759 NAD(P)(+) transhydrogenase (AB-specific) YP_001755468.1 KEGG: mex:Mext_2758 hypothetical protein YP_001755469.1 PFAM: ABC-1 domain protein; KEGG: mex:Mext_2757 ABC-1 domain protein YP_001755470.1 TIGRFAM: oligoendopeptidase, pepF/M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; KEGG: mex:Mext_2754 oligoendopeptidase, PepF/M3 family YP_001755471.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mex:Mext_2753 sigma-54 factor interaction domain-containing protein YP_001755472.1 KEGG: mex:Mext_2752 peptidoglycan-binding domain 1 protein YP_001755473.1 PFAM: protein of unknown function DUF882; Peptidase M15A; KEGG: mex:Mext_2751 protein of unknown function DUF882 YP_001755475.1 catalyzes the formation of phosphoenolpyruvate from pyruvate YP_001755476.1 KEGG: mex:Mext_2892 hypothetical protein YP_001755477.1 PFAM: photosynthetic reaction centre cytochrome c subunit; KEGG: mex:Mext_2738 photosynthetic reaction centre cytochrome c subunit YP_001755478.1 TIGRFAM: photosynthetic reaction center, M subunit; PFAM: photosynthetic reaction centre protein; KEGG: mex:Mext_2737 photosynthetic reaction center, M subunit YP_001755479.1 TIGRFAM: photosynthetic reaction center L subunit; PFAM: photosynthetic reaction centre protein; KEGG: mex:Mext_2736 photosynthetic reaction center L subunit YP_001755480.1 PFAM: antenna complex alpha/beta subunit; KEGG: mex:Mext_2735 antenna complex alpha/beta subunit YP_001755481.1 PFAM: antenna complex alpha/beta subunit; KEGG: mex:Mext_2734 antenna complex alpha/beta subunit YP_001755482.1 KEGG: mex:Mext_2733 hypothetical protein YP_001755483.1 TIGRFAM: chlorophyllide reductase subunit Z; PFAM: oxidoreductase/nitrogenase component 1; protein of unknown function DUF1197; KEGG: mex:Mext_2732 chlorophyllide reductase subunit Z YP_001755484.1 TIGRFAM: chlorophyllide reductase subunit Y; PFAM: oxidoreductase/nitrogenase component 1; KEGG: mex:Mext_2731 chlorophyllide reductase subunit Y YP_001755485.1 KEGG: mex:Mext_2730 chlorophyllide reductase iron protein subunit X; TIGRFAM: chlorophyllide reductase iron protein subunit X; PFAM: NifH/frxC-family protein YP_001755486.1 TIGRFAM: chlorophyll synthesis pathway, BchC; PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_2729 chlorophyll synthesis pathway, BchC YP_001755487.1 PFAM: O-methyltransferase family 2; Methyltransferase type 12; KEGG: mex:Mext_2728 O-methyltransferase family 2 YP_001755488.1 PFAM: Polyprenyl synthetase; KEGG: mex:Mext_2727 polyprenyl synthetase YP_001755489.1 TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_2726 phytoene desaturase YP_001755490.1 PFAM: hydroxyneurosporene synthase; KEGG: mex:Mext_2725 hydroxyneurosporene synthase YP_001755491.1 KEGG: bbt:BBta_1800 putative membrane protein of unknown function YP_001755492.1 KEGG: sil:SPO0555 hypothetical protein YP_001755493.1 PFAM: glycosyl transferase group 1; KEGG: rle:pRL110049 putative glycosyl transferase YP_001755494.1 KEGG: sil:SPO0551 hypothetical protein YP_001755495.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: mlo:mlr3264 ATP-binding component of a ABC transport system (oligopeptide) YP_001755496.1 KEGG: osa:4324538 Os01g0496900 YP_001755497.1 PFAM: extracellular solute-binding protein family 5; KEGG: sil:SPO0560 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein YP_001755498.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rde:RD1_1100 oligopeptide ABC transporter, permease protein, putative YP_001755499.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: smd:Smed_4595 binding-protein-dependent transport systems inner membrane component YP_001755500.1 KEGG: mex:Mext_2022 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001755501.1 TIGRFAM: conserved hypothetical selenoprotein; PFAM: Selenoprotein W-related; KEGG: mex:Mext_2021 conserved hypothetical selenoprotein YP_001755502.1 PFAM: carboxyl transferase; KEGG: mex:Mext_0282 carboxyl transferase YP_001755503.1 KEGG: mex:Mext_4409 hypothetical protein YP_001755504.1 KEGG: azc:AZC_3704 hypothetical protein YP_001755505.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_2910 metallophosphoesterase YP_001755506.1 KEGG: mex:Mext_4848 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase YP_001755507.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: bch:Bcen2424_6520 phenazine biosynthesis protein PhzF family YP_001755509.1 PFAM: Squalene/phytoene synthase; KEGG: mex:Mext_3012 squalene/phytoene synthase YP_001755510.1 TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_3011 phytoene desaturase YP_001755511.1 PFAM: Hep_Hag repeat-containing protein; KEGG: rpb:RPB_2793 haemagluttinin-like protein YP_001755512.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: vvy:VV0350 putative nucleotide di-P-sugar epimerase or dehydratase YP_001755513.1 KEGG: mag:amb1420 hypothetical protein YP_001755514.1 PFAM: lipolytic protein G-D-S-L family; KEGG: nar:Saro_3112 lipolytic enzyme, G-D-S-L YP_001755515.1 KEGG: mex:Mext_2675 dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_001755516.1 KEGG: atc:AGR_C_4165 adenine deaminase; TIGRFAM: adenine deaminase; PFAM: amidohydrolase YP_001755517.1 PFAM: OsmC family protein; KEGG: mex:Mext_2488 OsmC family protein YP_001755518.1 KEGG: acr:Acry_2579 hypothetical protein YP_001755519.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bov:BOV_A0749 acyl-CoA dehydrogenase family protein YP_001755520.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis YP_001755521.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bra:BRADO4810 putative carnitine dehydratase/acyl-CoA transferases-related (COG1804) YP_001755522.1 PFAM: acriflavin resistance protein; KEGG: nha:Nham_1509 acriflavin resistance protein YP_001755523.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: nwi:Nwi_1266 secretion protein HlyD YP_001755527.1 PFAM: isochorismatase hydrolase; KEGG: bra:BRADO3353 conserved hypothetical protein; putative hydrolase, isochorismatase family protein YP_001755528.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bja:blr4132 hypothetical protein YP_001755529.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bra:BRADO2464 putative transcriptional regulatory protein, LysR family YP_001755530.1 KEGG: mex:Mext_3019 urease, gamma subunit; TIGRFAM: urease, beta subunit; urease, gamma subunit; PFAM: Urease beta subunit; Urease gamma subunit region YP_001755531.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits YP_001755532.1 PFAM: UreE urease accessory domain protein; KEGG: mex:Mext_3015 UreE urease accessory domain protein YP_001755533.1 PFAM: Urease accessory protein UreF; KEGG: mex:Mext_3014 urease accessory protein UreF YP_001755534.1 TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: mex:Mext_3013 urease accessory protein UreG YP_001755536.1 KEGG: mex:Mext_4427 hypothetical protein YP_001755537.1 PFAM: Na+/solute symporter; KEGG: mex:Mext_4426 Na+/solute symporter YP_001755538.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_4192 ornithine carbamoyltransferase YP_001755539.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_4193 binding-protein-dependent transport systems inner membrane component YP_001755540.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mex:Mext_4194 ABC transporter related YP_001755541.1 PFAM: cyclic nucleotide-binding; KEGG: mex:Mext_4195 cyclic nucleotide-binding YP_001755542.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis YP_001755543.1 KEGG: mex:Mext_3656 metal dependent phophohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region YP_001755544.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_4267 ABC transporter related YP_001755545.1 PFAM: aminotransferase class-III; KEGG: bur:Bcep18194_B0665 aminotransferase class-III YP_001755546.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mpt:Mpe_A1467 2,2-dialkylglycine decarboxylase repressor protein YP_001755547.1 KEGG: dge:Dgeo_1231 acyl-CoA dehydrogenase, type 2-like protein YP_001755548.1 KEGG: mex:Mext_4846 hypothetical protein YP_001755549.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_4268 putative alpha/beta hydrolase fold YP_001755550.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: mex:Mext_4269 bifunctional deaminase-reductase domain protein YP_001755551.1 PFAM: protein of unknown function DUF336; KEGG: mex:Mext_4271 protein of unknown function DUF336 YP_001755552.1 PFAM: extracellular solute-binding protein family 5; KEGG: mex:Mext_4272 extracellular solute-binding protein family 5 YP_001755553.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_4273 binding-protein-dependent transport systems inner membrane component YP_001755554.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_4274 binding-protein-dependent transport systems inner membrane component YP_001755555.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: hau:Haur_2025 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_001755556.1 PFAM: Dak kinase; Dak phosphatase; KEGG: mex:Mext_1031 glycerone kinase YP_001755557.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA3468 putative permease protein of sugar ABC transporter YP_001755558.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpc:RPC_3645 binding-protein-dependent transport systems inner membrane component YP_001755559.1 PFAM: extracellular solute-binding protein family 1; KEGG: rpc:RPC_3646 twin-arginine translocation pathway signal YP_001755560.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: azc:AZC_4208 ABC transporter ATP-binding protein YP_001755561.1 KEGG: bja:blr3199 hypothetical protein YP_001755562.1 PFAM: FAD linked oxidase domain protein; KEGG: rpa:RPA2002 FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal YP_001755563.1 PFAM: protein of unknown function DUF167; KEGG: ccr:CC_3622 hypothetical protein YP_001755564.1 PFAM: protein of unknown function DUF849; KEGG: acr:Acry_2778 protein of unknown function DUF849 YP_001755565.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: rsq:Rsph17025_3904 protein of unknown function DUF849 YP_001755566.1 PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_0428 ABC transporter related YP_001755567.1 PFAM: inner-membrane translocator; KEGG: xau:Xaut_0429 inner-membrane translocator YP_001755568.1 PFAM: Extracellular ligand-binding receptor; KEGG: xau:Xaut_0430 extracellular ligand-binding receptor YP_001755569.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: xau:Xaut_0431 transcriptional regulator, GntR family YP_001755570.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rsq:Rsph17025_3899 hypothetical protein YP_001755571.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate YP_001755572.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: mex:Mext_4204 D-lactate dehydrogenase (cytochrome) YP_001755573.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mex:Mext_4650 regulatory protein GntR HTH YP_001755574.1 KEGG: dvl:Dvul_2627 hypothetical protein YP_001755575.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mex:Mext_1385 GntR domain protein YP_001755576.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: mex:Mext_1386 TRAP dicarboxylate transporter-DctP subunit YP_001755577.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: mex:Mext_1387 tripartite ATP-independent periplasmic transporter DctQ component YP_001755578.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: mex:Mext_1388 TRAP dicarboxylate transporter, DctM subunit YP_001755579.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: pap:PSPA7_4026 hypothetical protein YP_001755580.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA YP_001755581.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: mex:Mext_4648 L-carnitine dehydratase/bile acid-inducible protein F YP_001755582.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_4199 major facilitator superfamily MFS_1 YP_001755583.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_0306 major facilitator superfamily MFS_1 YP_001755584.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_0302 ErfK/YbiS/YcfS/YnhG family protein YP_001755585.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese YP_001755586.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine YP_001755587.1 KEGG: mex:Mext_1957 hypothetical protein YP_001755588.1 TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: mex:Mext_1956 exodeoxyribonuclease III Xth YP_001755589.1 PFAM: Glutathione S-transferase domain; KEGG: sal:Sala_2088 glutathione S-transferase-like protein YP_001755590.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: mex:Mext_1955 Sel1 domain protein repeat-containing protein YP_001755591.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis YP_001755592.1 PFAM: transglutaminase domain protein; KEGG: mex:Mext_2618 transglutaminase domain protein YP_001755593.1 PFAM: Integrase catalytic region; KEGG: ret:RHE_PA00091 probable insertion sequence transposase protein YP_001755594.1 PFAM: transposase IS3/IS911 family protein; KEGG: ypn:YPN_3423 helix-turn-helix, fis-type YP_001755595.1 PFAM: protein of unknown function DUF162; KEGG: mex:Mext_2617 protein of unknown function DUF162 YP_001755596.1 PFAM: protein of unknown function DUF162; KEGG: mex:Mext_2616 protein of unknown function DUF162 YP_001755597.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: mex:Mext_2615 protein of unknown function DUF224 cysteine-rich region domain protein YP_001755598.1 KEGG: mex:Mext_4416 hypothetical protein YP_001755599.1 KEGG: mex:Mext_0016 hypothetical protein YP_001755600.1 KEGG: mex:Mext_0017 hypothetical protein YP_001755601.1 PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: mex:Mext_0413 peptidyl-dipeptidase DCP YP_001755602.1 PFAM: Extensin family protein; KEGG: mex:Mext_0412 extensin family protein YP_001755603.1 PFAM: Peptidoglycan-binding domain 1 protein; ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_0411 ErfK/YbiS/YcfS/YnhG family protein YP_001755604.1 PFAM: response regulator receiver; KEGG: mex:Mext_0407 response regulator receiver YP_001755605.1 PFAM: protein of unknown function UPF0102; KEGG: mex:Mext_0406 protein of unknown function UPF0102 YP_001755606.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mex:Mext_0405 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase YP_001755607.1 PFAM: Extracellular ligand-binding receptor; KEGG: mex:Mext_0404 extracellular ligand-binding receptor YP_001755608.1 KEGG: mex:Mext_0403 oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB YP_001755609.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine YP_001755610.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs YP_001755611.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons YP_001755612.1 PFAM: protein of unknown function DUF1236; KEGG: mex:Mext_0452 protein of unknown function DUF1236 YP_001755613.1 TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: mex:Mext_4685 general substrate transporter YP_001755614.1 KEGG: ang:An05g02280 hypothetical protein Pfam: PGAP1 Abhydrolase_1 YP_001755615.1 KEGG: mex:Mext_0084 hypothetical protein YP_001755616.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase YP_001755617.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mex:Mext_0073 cyclic nucleotide-binding YP_001755618.1 PFAM: protein of unknown function DUF329; KEGG: azc:AZC_3144 hypothetical protein YP_001755619.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: mex:Mext_2628 maf protein YP_001755620.1 KEGG: mex:Mext_2343 hypothetical protein YP_001755621.1 KEGG: mex:Mext_3113 hypothetical protein YP_001755622.1 TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: mex:Mext_3776 polyhydroxyalkanoate depolymerase, intracellular YP_001755623.1 KEGG: mex:Mext_1537 hypothetical protein YP_001755624.1 PFAM: Hypoxia induced protein conserved region; KEGG: mex:Mext_1538 hypoxia induced protein conserved region YP_001755625.1 KEGG: mex:Mext_1540 hypothetical protein YP_001755626.1 TIGRFAM: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: mex:Mext_1541 ATP--cobalamin adenosyltransferase YP_001755627.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: mex:Mext_1542 electron transfer flavoprotein alpha/beta-subunit YP_001755628.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: mex:Mext_1543 electron transfer flavoprotein alpha subunit YP_001755629.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: mex:Mext_1544 3-hydroxybutyryl-CoA dehydrogenase YP_001755630.1 KEGG: mex:Mext_1545 hypothetical protein YP_001755631.1 TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_1546 NAD(P)H quinone oxidoreductase, PIG3 family YP_001755632.1 PFAM: Extracellular ligand-binding receptor; KEGG: rpa:RPA1741 possible branched-chain amino acid transport system substrate-binding protein YP_001755633.1 PFAM: protein of unknown function DUF938; KEGG: azc:AZC_1770 hypothetical protein YP_001755634.1 acts as a promotor non-specific transcription repressor YP_001755635.1 PFAM: KaiB domain protein; KEGG: mex:Mext_4109 KaiB domain protein YP_001755636.1 PFAM: KaiB domain protein; KEGG: mex:Mext_4108 KaiB domain protein YP_001755637.1 KEGG: mex:Mext_4107 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein YP_001755638.1 KEGG: mex:Mext_1547 uracil phosphoribosyltransferase; TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_001755639.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_4068 chemotaxis sensory transducer YP_001755640.1 KEGG: mex:Mext_2709 hypothetical protein YP_001755641.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_2708 regulatory protein TetR YP_001755642.1 KEGG: mex:Mext_2706 hypothetical protein YP_001755643.1 PFAM: Thioredoxin domain; KEGG: mex:Mext_1773 thioredoxin domain YP_001755644.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_4212 glycosyl transferase family 2 YP_001755645.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: oan:Oant_2758 helix-turn-helix-domain containing protein AraC type YP_001755646.1 TIGRFAM: MJ0042 family finger-like protein; KEGG: mex:Mext_2862 MJ0042 family finger-like protein YP_001755647.1 KEGG: mex:Mext_2863 cell division ATP-binding protein FtsE; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase YP_001755648.1 PFAM: protein of unknown function DUF214; KEGG: mex:Mext_2864 protein of unknown function DUF214 YP_001755649.1 PFAM: protein of unknown function DUF218; KEGG: mex:Mext_2865 protein of unknown function DUF218 YP_001755650.1 KEGG: mex:Mext_2504 hypothetical protein YP_001755651.1 TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: mex:Mext_2503 PTS IIA-like nitrogen-regulatory protein PtsN YP_001755652.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: mex:Mext_2502 ribosomal subunit interface protein YP_001755653.1 involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans YP_001755654.1 necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space YP_001755658.1 PFAM: RNA binding S1 domain protein; SMART: Helix-hairpin-helix DNA-binding class 1; Resolvase RNase H domain protein fold; KEGG: mex:Mext_0813 RNA binding S1 domain protein YP_001755659.1 KEGG: mag:amb2853 hypothetical protein YP_001755660.1 KEGG: ana:all2289 glucosyltransferase YP_001755661.1 KEGG: zmo:ZMO0627 hypothetical protein YP_001755662.1 KEGG: mex:Mext_1246 hypothetical protein YP_001755666.1 KEGG: mex:Mext_0496 hypothetical protein YP_001755667.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_2089 LysR substrate-binding YP_001755668.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_2090 short-chain dehydrogenase/reductase SDR YP_001755669.1 PFAM: Transketolase domain protein; KEGG: mex:Mext_2091 transketolase domain protein YP_001755670.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: mex:Mext_2092 transketolase central region YP_001755671.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: xau:Xaut_1538 3-hydroxyisobutyrate dehydrogenase YP_001755673.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: mex:Mext_2094 TRAP C4-dicarboxylate transport system permease DctM subunit YP_001755675.1 activates fatty acids by binding to coenzyme A YP_001755676.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: bbt:BBta_4094 putative TRAP-type C4-dicarboxylate transport system, periplasmic component YP_001755677.1 catalyzes the formation of glyoxylate from (S)-ureidoglycolate YP_001755678.1 TIGRFAM: allantoin catabolism protein; PFAM: protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein; KEGG: rpa:RPA0553 hypothetical protein YP_001755679.1 involved in the transport of C4-dicarboxylates across the membrane YP_001755680.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rpa:RPA0551 transcriptional regulator, LysR family YP_001755681.1 PFAM: thioesterase superfamily protein; KEGG: saq:Sare_0552 hypothetical protein YP_001755682.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; KEGG: mex:Mext_1331 diguanylate cyclase YP_001755683.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; CHASE3 domain protein; KEGG: mex:Mext_2838 chemotaxis sensory transducer YP_001755684.1 KEGG: mex:Mext_4522 hypothetical protein YP_001755685.1 KEGG: mex:Mext_2131 hypothetical protein YP_001755686.1 KEGG: sen:SACE_2069 hypothetical protein YP_001755687.1 KEGG: mex:Mext_1246 hypothetical protein YP_001755688.1 KEGG: mex:Mext_4107 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001755689.1 PFAM: protein of unknown function DUF1311; KEGG: ccr:CC_2991 hypothetical protein YP_001755690.1 PFAM: protein of unknown function DUF74; KEGG: bra:BRADO6695 hypothetical protein YP_001755692.1 PFAM: Sel1 domain protein repeat-containing protein; peptidase C14 caspase catalytic subunit p20; KEGG: mag:amb0484 hypothetical protein YP_001755693.1 KEGG: ade:Adeh_3797 hypothetical protein YP_001755694.1 KEGG: mgm:Mmc1_0186 hypothetical protein YP_001755696.1 KEGG: scl:sce1019 protein kinase YP_001755697.1 KEGG: scl:sce7119 probable serine protease YP_001755698.1 PFAM: OmpA/MotB domain protein; KEGG: bbt:BBta_0555 hypothetical protein YP_001755699.1 KEGG: mgm:Mmc1_2010 hypothetical protein YP_001755700.1 KEGG: xau:Xaut_0345 hypothetical protein YP_001755701.1 KEGG: bra:BRADO0711 hypothetical protein; putative signal peptide YP_001755702.1 KEGG: azc:AZC_3664 hypothetical protein YP_001755703.1 KEGG: mex:Mext_0812 hypothetical protein YP_001755704.1 KEGG: mex:Mext_3394 hypothetical protein YP_001755705.1 KEGG: mex:Mext_3786 hypothetical protein YP_001755706.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; PAS fold-3 domain protein; KEGG: rpa:RPA1490 bacteriophytochrome (light-regulated signal transduction histidine kinase), PhyB4 YP_001755707.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: rpc:RPC_3790 two component transcriptional regulator, LuxR family YP_001755708.1 PFAM: protein of unknown function DUF808; KEGG: mex:Mext_1746 protein of unknown function DUF808 YP_001755709.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mex:Mext_4359 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family YP_001755710.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_4358 efflux transporter, RND family, MFP subunit YP_001755711.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_4357 regulatory protein TetR YP_001755712.1 KEGG: mex:Mext_4051 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001755713.1 KEGG: mex:Mext_1190 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001755714.1 KEGG: mex:Mext_4390 hypothetical protein YP_001755715.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; KEGG: mex:Mext_4707 carbohydrate kinase, YjeF related protein YP_001755716.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_3476 NUDIX hydrolase YP_001755717.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: mex:Mext_3475 fumarylacetoacetate (FAA) hydrolase YP_001755718.1 PFAM: FAD linked oxidase domain protein; KEGG: mex:Mext_3474 FAD linked oxidase domain protein YP_001755719.1 KEGG: mex:Mext_3473 hypothetical protein YP_001755720.1 PFAM: extracellular solute-binding protein family 5; KEGG: bja:blr3931 probable substrate-binding protein YP_001755721.1 TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Proline dehydrogenase; Aldehyde Dehydrogenase; KEGG: smd:Smed_0092 delta-1-pyrroline-5-carboxylate dehydrogenase YP_001755722.1 KEGG: gbe:GbCGDNIH1_1428 hypothetical secreted protein YP_001755723.1 PFAM: Saccharopine dehydrogenase; KEGG: pla:Plav_2027 saccharopine dehydrogenase YP_001755724.1 PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; KEGG: bja:blr2974 dehydratase YP_001755725.1 PFAM: major facilitator superfamily MFS_1; KEGG: bmu:Bmul_4153 major facilitator superfamily MFS_1 YP_001755726.1 PFAM: Malate/L-lactate dehydrogenase; KEGG: rpb:RPB_1710 malate/L-lactate dehydrogenase YP_001755727.1 PFAM: Microcystin LR degradation protein MlrC-like; KEGG: bbr:BB2142 hypothetical protein YP_001755728.1 PFAM: protein of unknown function DUF1194; KEGG: mes:Meso_1299 protein of unknown function DUF1194 YP_001755729.1 KEGG: mex:Mext_1003 hypothetical protein YP_001755730.1 PFAM: protein of unknown function DUF1223; KEGG: azc:AZC_4462 hypothetical protein YP_001755731.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA YP_001755732.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_4541 alcohol dehydrogenase zinc-binding domain protein YP_001755733.1 KEGG: mex:Mext_4543 SH3 type 3 domain protein YP_001755734.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_4544 short-chain dehydrogenase/reductase SDR YP_001755735.1 FabF, beta-Ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP. YP_001755736.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide YP_001755737.1 KEGG: mex:Mext_4429 hypothetical protein YP_001755738.1 PFAM: glutamate--cysteine ligase GCS2; KEGG: mex:Mext_4653 glutamate--cysteine ligase GCS2 YP_001755739.1 PFAM: CHAD domain containing protein; adenylate cyclase; KEGG: mex:Mext_3081 CHAD domain containing protein YP_001755740.1 TIGRFAM: selenocysteine-specific translation elongation factor; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3; KEGG: sat:SYN_02191 selenocysteine-specific protein translation elongation factor YP_001755741.1 KEGG: mex:Mext_4555 hypothetical protein YP_001755742.1 KEGG: azc:AZC_0067 hypothetical protein YP_001755743.1 PFAM: glycosyl transferase group 1; KEGG: azc:AZC_0068 glycosyltransferase YP_001755744.1 PFAM: lipolytic protein G-D-S-L family; KEGG: mex:Mext_3316 lipolytic protein G-D-S-L family YP_001755745.1 heat shock protein involved in degradation of misfolded proteins YP_001755746.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; CHASE3 domain protein; KEGG: mex:Mext_1266 chemotaxis sensory transducer YP_001755747.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: azc:AZC_0660 methyl-accepting chemotaxis protein YP_001755748.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; Xanthine/uracil/vitamin C permease; sulphate transporter; KEGG: mex:Mext_3643 sulphate transporter YP_001755749.1 heat shock protein involved in degradation of misfolded proteins YP_001755750.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mex:Mext_0646 protein of unknown function DUF6 transmembrane YP_001755751.1 PFAM: PTS system fructose subfamily IIA component; KEGG: mex:Mext_1235 PTS system fructose subfamily IIA component YP_001755752.1 KEGG: mex:Mext_1236 HPr kinase YP_001755753.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mex:Mext_1237 ATP-binding region ATPase domain protein YP_001755754.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_1238 response regulator receiver YP_001755755.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mex:Mext_1239 pyridoxamine 5'-phosphate oxidase-related FMN-binding YP_001755756.1 KEGG: mex:Mext_1897 hypothetical protein YP_001755757.1 binds to the ribosome on the universally-conserved alpha-sarcin loop YP_001755758.1 PFAM: cytochrome c class I; KEGG: mes:Meso_1589 class I diheme cytochrome c4 YP_001755759.1 KEGG: rsq:Rsph17025_1771 glucose/sorbosone dehydrogenase-like protein YP_001755760.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: ccr:CC_1101 hypothetical protein YP_001755761.1 KEGG: sal:Sala_2863 hypothetical protein YP_001755762.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: mex:Mext_4674 molybdenum cofactor synthesis domain protein YP_001755763.1 TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: mex:Mext_4673 molybdenum cofactor biosynthesis protein C YP_001755764.1 PFAM: Indole-3-glycerol phosphate synthase; KEGG: mex:Mext_4672 indole-3-glycerol-phosphate synthase YP_001755765.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate YP_001755766.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: mex:Mext_4670 glutamine amidotransferase of anthranilate synthase YP_001755767.1 KEGG: mex:Mext_4668 anthranilate synthase component I; TIGRFAM: anthranilate synthase component I; PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like YP_001755768.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: mex:Mext_4667 PpiC-type peptidyl-prolyl cis-trans isomerase YP_001755769.1 PFAM: triosephosphate isomerase; KEGG: mex:Mext_4666 triose-phosphate isomerase YP_001755770.1 KEGG: azc:AZC_3623 hypothetical protein YP_001755771.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: mex:Mext_4662 preprotein translocase, SecG subunit YP_001755772.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer YP_001755773.1 PFAM: DNA polymerase III chi subunit HolC; KEGG: mex:Mext_4656 DNA polymerase III chi subunit HolC YP_001755774.1 PFAM: peptidase S10 serine carboxypeptidase; KEGG: mex:Mext_4655 peptidase S10 serine carboxypeptidase YP_001755776.1 TIGRFAM: cobalt transporter, subunit CbtB; PFAM: Cobalt transporter subunit CbtB putative; KEGG: mex:Mext_1444 cobalt transporter, subunit CbtB YP_001755777.1 TIGRFAM: cobalt transporter, subunit CbtA; PFAM: Cobalt transporter subunit CbtA putative; KEGG: mex:Mext_1443 cobalt transporter, subunit CbtA YP_001755778.1 PFAM: protein of unknown function DUF1636; KEGG: mex:Mext_1442 protein of unknown function DUF1636 YP_001755779.1 TIGRFAM: cobalamin biosynthesis protein CobW; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: mex:Mext_1441 cobalamin biosynthesis protein CobW YP_001755780.1 with CobST catalyzes the formation of cobyrinic acid a,c-diamide from hydrogenobyrinic acid a,c-diamide in an ATP-dependent manner; involved in porphyrin and chlorophyll metabolism; vitamin B12 metabolism YP_001755781.1 TIGRFAM: precorrin-3B synthase; PFAM: nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: mex:Mext_1438 precorrin-3B synthase YP_001755782.1 PFAM: Precorrin-8X methylmutase CbiC/CobH; KEGG: mex:Mext_1437 precorrin-8X methylmutase YP_001755783.1 TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mex:Mext_1436 precorrin-2 C20-methyltransferase YP_001755784.1 TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mex:Mext_1435 precorrin-3B C17-methyltransferase YP_001755785.1 PFAM: Precorrin-6x reductase CbiJ/CobK; KEGG: mex:Mext_4722 precorrin-6x reductase YP_001755786.1 KEGG: mex:Mext_1034 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_001755787.1 KEGG: mex:Mext_1035 putative CobE protein YP_001755788.1 TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mex:Mext_1039 precorrin-4 C11-methyltransferase YP_001755789.1 responsible for the amidation of carboxylic groups at position A and C of cobyrinic acid or hydrogenobrynic acid YP_001755790.1 PFAM: helix-turn-helix domain protein; KEGG: mex:Mext_1041 helix-turn-helix domain protein YP_001755791.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: mex:Mext_1042 antibiotic biosynthesis monooxygenase YP_001755792.1 TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; KEGG: mex:Mext_1044 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase YP_001755793.1 PFAM: ferric-uptake regulator; KEGG: mex:Mext_1045 Fe2+/Zn2+ uptake regulation protein-like protein YP_001755794.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_1046 ABC transporter related YP_001755795.1 PFAM: ABC-3 protein; KEGG: mex:Mext_1047 ABC-3 protein YP_001755796.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: mex:Mext_2384 hypothetical protein YP_001755797.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; domain of unknown function DUF1730; KEGG: mex:Mext_2385 domain of unknown function DUF1730 YP_001755798.1 PFAM: Glutathione S-transferase domain; KEGG: mex:Mext_2386 glutathione S-transferase domain YP_001755799.1 KEGG: mex:Mext_2387 undecaprenol kinase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA YP_001755800.1 PFAM: methylmalonyl-CoA mutase; KEGG: mex:Mext_2388 methylmalonyl-CoA mutase YP_001755801.1 KEGG: mex:Mext_2389 hypothetical protein YP_001755802.1 KEGG: mex:Mext_2390 hypothetical protein YP_001755803.1 PFAM: Glutathione S-transferase domain; KEGG: mex:Mext_4052 glutathione S-transferase-like protein YP_001755804.1 PFAM: protein of unknown function RIO1; protein kinase; SMART: tyrosine protein kinase; protein phosphatase 2C domain protein; serine/threonine protein kinase; KEGG: mex:Mext_1132 protein kinase YP_001755805.1 KEGG: bja:bll0661 hypothetical protein; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_001755806.1 KEGG: mex:Mext_1863 hypothetical protein YP_001755807.1 KEGG: mex:Mext_1861 DNA polymerase III, subunits gamma and tau; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase YP_001755808.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_1860 hypothetical protein YP_001755809.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP YP_001755810.1 involved in a recombinational process of DNA repair, independent of the recBC complex YP_001755811.1 KEGG: mex:Mext_1636 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase YP_001755812.1 TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: mex:Mext_1635 methionyl-tRNA formyltransferase YP_001755813.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability YP_001755814.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica. YP_001755815.1 PFAM: Amylo-alpha-16-glucosidase; KEGG: mex:Mext_1625 amylo-alpha-16-glucosidase YP_001755816.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_1626 glycosyl transferase group 1 YP_001755817.1 PFAM: ribosomal protein L35; KEGG: mex:Mext_1627 ribosomal protein L35 YP_001755818.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit YP_001755819.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily YP_001755820.1 KEGG: mex:Mext_1630 phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit YP_001755821.1 PFAM: SEC-C motif domain protein; KEGG: mex:Mext_1631 sec-C motif domain protein YP_001755822.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: mex:Mext_1632 UBA/ThiF-type NAD/FAD binding protein YP_001755823.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits YP_001755824.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_1623 glycosyl transferase group 1 YP_001755825.1 KEGG: mex:Mext_1622 hypothetical protein YP_001755826.1 PFAM: protein of unknown function DUF1150; KEGG: mex:Mext_1621 protein of unknown function DUF1150 YP_001755827.1 PFAM: heat shock protein Hsp20; KEGG: mex:Mext_1620 heat shock protein HSP20 YP_001755828.1 KEGG: bja:blr7297 hypothetical protein YP_001755829.1 KEGG: mex:Mext_1619 hypothetical protein YP_001755830.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: mex:Mext_1618 MotA/TolQ/ExbB proton channel YP_001755831.1 TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; KEGG: mex:Mext_1617 protein TolR YP_001755832.1 TIGRFAM: TonB family protein; protein TolA; KEGG: mex:Mext_1616 TonB family protein YP_001755833.1 KEGG: mex:Mext_3631 hypothetical protein YP_001755834.1 KEGG: mex:Mext_3632 hypothetical protein YP_001755835.1 PFAM: protein of unknown function DUF188; KEGG: mex:Mext_4679 protein of unknown function DUF188 YP_001755837.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mex:Mext_4777 adenylyl cyclase class-3/4/guanylyl cyclase YP_001755838.1 PFAM: aldo/keto reductase; KEGG: bbt:BBta_2824 putative aldo/keto reductase YP_001755839.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mex:Mext_2492 diguanylate cyclase YP_001755840.1 KEGG: mex:Mext_4776 penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_001755841.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_3823 LysR substrate-binding YP_001755843.1 PFAM: protein of unknown function DUF1275; KEGG: mex:Mext_3824 protein of unknown function DUF1275 YP_001755844.1 KEGG: hch:HCH_05855 ATP-dependent helicase HrpB YP_001755845.1 KEGG: mlo:mll8493 hypothetical protein YP_001755846.1 KEGG: rpc:RPC_1549 type IV pilus assembly PilZ YP_001755847.1 PFAM: acyltransferase 3; KEGG: mex:Mext_1250 acyltransferase 3 YP_001755848.1 KEGG: mex:Mext_1252 hypothetical protein YP_001755849.1 KEGG: ret:RHE_CH01073 hypothetical protein YP_001755850.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine YP_001755851.1 KEGG: mex:Mext_1611 hypothetical protein YP_001755852.1 PFAM: glutamine amidotransferase class-II; KEGG: mex:Mext_4869 glutamine amidotransferase class-II YP_001755853.1 KEGG: mex:Mext_4868 asparagine synthase family amidotransferase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); asparagine synthase family amidotransferase; PFAM: glutamine amidotransferase class-II; asparagine synthase YP_001755854.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mnin Bacillus subtilis the protein in this cluster is considered non-essential YP_001755856.1 PFAM: PRC-barrel domain protein; KEGG: mex:Mext_2854 PRC-barrel domain protein YP_001755857.1 KEGG: mex:Mext_2853 hypothetical protein YP_001755858.1 PFAM: WD-40 repeat protein; cytochrome c class I; KEGG: mex:Mext_2844 WD-40 repeat protein YP_001755859.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mex:Mext_0381 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_001755860.1 KEGG: mex:Mext_0382 hypothetical protein YP_001755861.1 KEGG: mex:Mext_0383 hypothetical protein YP_001755862.1 KEGG: mex:Mext_0384 hypothetical protein YP_001755863.1 KEGG: mex:Mext_0385 molybdopterin-guanine dinucleotide biosynthesis protein A YP_001755864.1 KEGG: mex:Mext_0386 hypothetical protein YP_001755865.1 PFAM: cytoplasmic chaperone TorD family protein; KEGG: mex:Mext_0387 cytoplasmic chaperone TorD family protein YP_001755866.1 TIGRFAM: formate dehydrogenase region TAT target; KEGG: mex:Mext_0388 formate dehydrogenase region TAT target YP_001755867.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mex:Mext_0389 molybdopterin oxidoreductase YP_001755868.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mex:Mext_0390 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_001755869.1 TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: mex:Mext_0391 formate dehydrogenase, gamma subunit YP_001755870.1 KEGG: mex:Mext_0392 hypothetical protein YP_001755871.1 KEGG: mex:Mext_0393 hypothetical protein YP_001755872.1 KEGG: eca:ECA0766 hypothetical protein YP_001755873.1 PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mex:Mext_1671 histidine kinase YP_001755874.1 KEGG: mex:Mext_1672 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein YP_001755875.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bja:bll6710 probable dehydrogenase YP_001755876.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: acr:Acry_1861 transcriptional regulator, GntR family YP_001755877.1 PFAM: aminotransferase class-III; KEGG: rsq:Rsph17025_0982 aminotransferase class-III YP_001755878.1 PFAM: aminoglycoside phosphotransferase; KEGG: rsp:RSP_0311 putative aminotransferase protein YP_001755879.1 PFAM: Amidase; KEGG: pfl:PFL_3536 hypothetical protein YP_001755880.1 PFAM: aminotransferase class-III; KEGG: atc:AGR_L_3037 hypothetical protein YP_001755881.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: azc:AZC_2048 ABC transporter ATP-binding protein YP_001755882.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_1649 binding-protein-dependent transport systems inner membrane component YP_001755883.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpb:RPB_1650 binding-protein-dependent transport systems inner membrane component YP_001755884.1 PFAM: extracellular solute-binding protein family 5; KEGG: rpb:RPB_1651 extracellular solute-binding protein, family 5 YP_001755885.1 KEGG: reh:H16_B0461 predicted flavoprotein involved in K+ transport YP_001755886.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: xau:Xaut_2571 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_001755887.1 PFAM: dehydroquinase class II; KEGG: xau:Xaut_2570 3-dehydroquinate dehydratase YP_001755888.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: azc:AZC_0204 LysR-family transcriptional regulator YP_001755889.1 PFAM: protein of unknown function DUF1028; KEGG: pde:Pden_3455 protein of unknown function DUF1028 YP_001755890.1 PFAM: Endoribonuclease L-PSP; KEGG: reh:H16_B0456 endoribonuclease L-PSP YP_001755891.1 PFAM: Glutathione S-transferase domain; KEGG: pmy:Pmen_0226 glutathione S-transferase, N-terminal domain YP_001755892.1 KEGG: xau:Xaut_2580 spermidine/putrescine ABC transporter ATPase subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase YP_001755893.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xau:Xaut_2579 binding-protein-dependent transport systems inner membrane component YP_001755894.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xau:Xaut_2578 binding-protein-dependent transport systems inner membrane component YP_001755895.1 PFAM: extracellular solute-binding protein family 1; KEGG: xau:Xaut_2577 extracellular solute-binding protein family 1 YP_001755896.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sme:SMc01657 putative ferrichrome-iron receptor precursor protein YP_001755897.1 KEGG: mex:Mext_1965 response regulator receiver YP_001755898.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: mlo:mll1618 methionine gamma-lyase YP_001755899.1 KEGG: mex:Mext_2015 hypothetical protein YP_001755900.1 PFAM: peptidase M48 Ste24p; KEGG: mex:Mext_2014 peptidase M48 Ste24p YP_001755901.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: rpa:RPA4231 putative oxidoreductase YP_001755902.1 PFAM: peptidase M55 D-aminopeptidase; KEGG: rfr:Rfer_3107 peptidase M55, D-aminopeptidase YP_001755903.1 PFAM: peptidase S58 DmpA; KEGG: reh:H16_A2097 D-aminopeptidase YP_001755904.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_0137 binding-protein-dependent transport systems inner membrane component YP_001755905.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_0138 binding-protein-dependent transport systems inner membrane component YP_001755906.1 PFAM: extracellular solute-binding protein family 5; KEGG: pol:Bpro_0139 extracellular solute-binding protein, family 5 YP_001755907.1 KEGG: pol:Bpro_0140 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_001755908.1 PFAM: peptidase T2 asparaginase 2; KEGG: pol:Bpro_0141 peptidase T2, asparaginase 2 YP_001755909.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: pol:Bpro_0142 transcriptional regulator, RpiR family YP_001755910.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bxe:Bxe_B0982 transcriptional regulator, GntR family YP_001755911.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: bxe:Bxe_B0980 putative gamma-carboxymuconolactone decarboxylase subunit YP_001755912.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bpt:Bpet1660 hypothetical protein YP_001755913.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bpt:Bpet1659 probable beta-hydroxyacid dehydrogenase YP_001755914.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_B0977 major facilitator superfamily (MFS)metabolite/H+ symporter YP_001755915.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: bxe:Bxe_B0976 putative gamma carboxymuconolactone decarboxylase YP_001755916.1 PFAM: Aldehyde Dehydrogenase; KEGG: bxe:Bxe_B0975 putative aldehyde dehydrogenase YP_001755917.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: bxe:Bxe_B0974 3-hydroxyisobutyrate dehydrogenase YP_001755918.1 PFAM: NIPSNAP family containing protein; KEGG: bxe:Bxe_B0973 hypothetical protein YP_001755919.1 PFAM: beta-lactamase domain protein; KEGG: ypi:YpsIP31758_0379 metallo-beta-lactamase family protein YP_001755920.1 PFAM: major facilitator superfamily MFS_1; KEGG: psb:Psyr_2181 major facilitator superfamily YP_001755921.1 PFAM: regulatory protein ArsR; regulatory protein IclR; KEGG: pla:Plav_1798 regulatory protein IclR YP_001755922.1 KEGG: rso:RS03032 putative periplasmic substrate-binding transmembrane protein YP_001755923.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bxe:Bxe_C0605 putative acyl-CoA dehydrogenase YP_001755924.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: mes:Meso_3279 acyl-CoA dehydrogenase-like YP_001755925.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: vei:Veis_0237 L-carnitine dehydratase/bile acid-inducible protein F YP_001755926.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: chy:CHY_1736 enoyl-CoA hydratase/isomerase family protein YP_001755927.1 TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: mag:amb0895 TRAP-type C4-dicarboxylate transport system YP_001755928.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: bmu:Bmul_3680 tripartite ATP-independent periplasmic transporter DctQ component YP_001755929.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rru:Rru_A3676 TRAP dicarboxylate transporter, DctM subunit YP_001755930.1 catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell YP_001755931.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane YP_001755932.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: smd:Smed_2902 transcriptional regulator, DeoR family YP_001755933.1 KEGG: atc:AGR_L_1617 hypothetical protein YP_001755934.1 KEGG: bbt:BBta_4905 sensor histidine kinase with multiple PAS and a response regulator receiver domain; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001755935.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III YP_001755936.1 KEGG: mex:Mext_3507 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001755937.1 response regulator for histidine kinase FixL; part of global network that controls expression of aerobic respiratory terminal oxidases and carbon and nitrogen metabolic enzymes YP_001755938.1 PFAM: response regulator receiver; KEGG: azc:AZC_4656 response regulator receiver YP_001755939.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: bra:BRADO2432 transcriptional regulator FixK YP_001755940.1 TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; KEGG: ecw:EcE24377A_1138 Tat-translocated enzyme YP_001755941.1 KEGG: spe:Spro_2928 hypothetical protein YP_001755943.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; KEGG: mex:Mext_2113 ATP-binding region ATPase domain protein YP_001755944.1 PFAM: extracellular solute-binding protein family 1; KEGG: rpe:RPE_0440 extracellular solute-binding protein, family 1 YP_001755945.1 PFAM: extracellular solute-binding protein family 5; KEGG: rfr:Rfer_1949 extracellular solute-binding protein, family 5 YP_001755946.1 PFAM: ATP-binding region ATPase domain protein; KEGG: mex:Mext_2113 ATP-binding region ATPase domain protein YP_001755948.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_2116 response regulator receiver YP_001755949.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_2117 histidine kinase YP_001755951.1 PFAM: cytochrome c class I; KEGG: azc:AZC_1250 cytochrome c YP_001755952.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: rsh:Rsph17029_3753 putative transcriptional regulator, GntR family YP_001755953.1 PFAM: protein of unknown function DUF983; KEGG: xau:Xaut_0415 protein of unknown function DUF983 YP_001755955.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_0170 ROSMUCR transcriptional regulator YP_001755956.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_0667 chemotaxis sensory transducer YP_001755959.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: mex:Mext_3867 diguanylate cyclase YP_001755960.1 KEGG: mex:Mext_4443 porin YP_001755961.1 KEGG: nwi:Nwi_1490 lipoprotein, putative YP_001755962.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mex:Mext_4855 GntR domain protein YP_001755963.1 KEGG: mex:Mext_4854 hypothetical protein YP_001755964.1 PFAM: Extracellular ligand-binding receptor; KEGG: mex:Mext_4853 extracellular ligand-binding receptor YP_001755965.1 PFAM: inner-membrane translocator; KEGG: mex:Mext_4852 inner-membrane translocator YP_001755966.1 PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_4851 ABC transporter related YP_001755967.1 PFAM: polysaccharide deacetylase; KEGG: mex:Mext_4850 polysaccharide deacetylase YP_001755968.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azc:AZC_1839 polar amino acid uptake family ABC transporter ATP-binding protein YP_001755969.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_1838 polar amino acid uptake family ABC transporter permease protein 2 YP_001755970.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_1837 polar amino acid uptake family ABC transporter permease protein 1 YP_001755971.1 PFAM: extracellular solute-binding protein family 3; KEGG: azc:AZC_1836 polar amino acid uptake family ABC transporter periplasmic substrate-binding protein YP_001755972.1 catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde; FAD-binding; can also catalyze the demethylation of other N-methyl amino acids YP_001755973.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: rle:pRL110559 putative AraC family transcriptional regulator YP_001755974.1 PFAM: Ethanolamine ammonia-lyase light chain; KEGG: mex:Mext_1953 ethanolamine ammonia-lyase YP_001755975.1 PFAM: Ethanolamine ammonia lyase large subunit; KEGG: jan:Jann_2577 ethanolamine ammonia lyase large subunit YP_001755976.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_3587 ErfK/YbiS/YcfS/YnhG family protein YP_001755977.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: acr:Acry_1422 short-chain dehydrogenase/reductase SDR YP_001755978.1 PFAM: Acetamidase/Formamidase; KEGG: bbt:BBta_3207 putative acetamidase/formamidase family protein YP_001755979.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bra:BRADO4854 putative branched-chain amino acid ABC transporter (ATP-binding protein) YP_001755980.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_3017 ABC transporter related YP_001755981.1 PFAM: inner-membrane translocator; KEGG: rpa:RPA2412 possible permease of ABC transporter YP_001755982.1 PFAM: inner-membrane translocator; KEGG: azc:AZC_3888 putative ABC transporter permease protein YP_001755983.1 KEGG: azc:AZC_3889 putative UreA/short-chain amide transport system substrate-binding protein precursor YP_001755984.1 PFAM: ANTAR domain protein; KEGG: bra:BRADO4859 conserved hypothetical protein; putative ANTAR domain (AmiR antitermination protein) YP_001755985.1 KEGG: bbt:BBta_3200 putative aliphatic amidase expression-regulating protein, AmiC YP_001755986.1 PFAM: Glutathione S-transferase domain; KEGG: nar:Saro_2762 glutathione S-transferase-like YP_001755987.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bxe:Bxe_B0926 putative oxidoreductase YP_001755988.1 PFAM: protein of unknown function DUF1348; KEGG: nar:Saro_2764 protein of unknown function DUF1348 YP_001755989.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: nar:Saro_2765 transcriptional regulator, LysR family YP_001755990.1 PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_3848 acyl-CoA dehydrogenase type 2 domain YP_001755991.1 PFAM: cytochrome B561; KEGG: bov:BOV_A0183 putative cytochrome b561 YP_001755992.1 KEGG: mex:Mext_0875 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001755993.1 KEGG: scl:sce8959 putative monooxygenase YP_001755994.1 KEGG: sus:Acid_5124 hypothetical protein YP_001755996.1 KEGG: aau:AAur_pTC10275 hypothetical protein YP_001755997.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rha:RHA1_ro07103 probable NADH dehydrogenase YP_001755998.1 KEGG: mex:Mext_0334 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: NMT1/THI5 like domain protein; SMART: extracellular solute-binding protein family 3 YP_001755999.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_0332 binding-protein-dependent transport systems inner membrane component YP_001756000.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_0331 ABC transporter related YP_001756001.1 PFAM: acriflavin resistance protein; KEGG: mex:Mext_4520 acriflavin resistance protein YP_001756002.1 KEGG: mex:Mext_4521 hypothetical protein YP_001756003.1 KEGG: mex:Mext_1785 hypothetical protein YP_001756004.1 PFAM: O-antigen polymerase; KEGG: rsq:Rsph17025_1973 O-antigen polymerase YP_001756005.1 PFAM: glycosyl transferase family 25; KEGG: reh:H16_A0903 glycosyltransferase involved in LPS biosynthesis YP_001756006.1 KEGG: mpa:MAP3517 hypothetical protein YP_001756007.1 KEGG: nmu:Nmul_A1821 hypothetical protein YP_001756008.1 PFAM: glycosyl transferase family 2; KEGG: smd:Smed_4681 glycosyl transferase family 2 YP_001756009.1 PFAM: polysaccharide biosynthesis protein; KEGG: nar:Saro_2629 polysaccharide biosynthesis protein YP_001756010.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xau:Xaut_1507 transcriptional regulator, LysR family YP_001756011.1 PFAM: protein of unknown function DUF1445; KEGG: vei:Veis_4744 protein of unknown function DUF1445 YP_001756012.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: vei:Veis_4743 major facilitator superfamily MFS_1 YP_001756013.1 PFAM: LamB/YcsF family protein; KEGG: xau:Xaut_1497 LamB/YcsF family protein YP_001756014.1 PFAM: Allophanate hydrolase subunit 1; KEGG: azc:AZC_4073 putative allophanate hydrolase subunit 1 YP_001756015.1 TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: xau:Xaut_1495 UreA amidolyase related protein YP_001756016.1 PFAM: class II aldolase/adducin family protein; KEGG: bja:blr4379 hypothetical protein YP_001756017.1 TIGRFAM: lytic murein transglycosylase; PFAM: Peptidoglycan-binding domain 1 protein; KEGG: mex:Mext_3055 lytic murein transglycosylase YP_001756018.1 KEGG: gbe:GbCGDNIH1_1407 hypothetical protein YP_001756019.1 KEGG: bbt:BBta_5564 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta YP_001756021.1 PFAM: Patatin; KEGG: mex:Mext_4420 patatin YP_001756022.1 PFAM: GcrA cell cycle regulator; KEGG: mex:Mext_4719 GcrA cell cycle regulator YP_001756023.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: bja:blr2303 immunogenic protein precursor YP_001756024.1 TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: mex:Mext_0973 cysteine synthase A YP_001756025.1 KEGG: jan:Jann_1110 hypothetical protein YP_001756027.1 KEGG: mex:Mext_0971 hypothetical protein YP_001756028.1 KEGG: mex:Mext_0970 hypothetical protein YP_001756029.1 KEGG: mex:Mext_4419 hypothetical protein YP_001756030.1 TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: mex:Mext_1265 GTP-binding protein TypA YP_001756031.1 KEGG: ret:RHE_PE00035 putative multidrug ABC transporter, ATP-binding and permease protein YP_001756032.1 PFAM: cytochrome P450; KEGG: mex:Mext_1270 cytochrome P450 YP_001756033.1 PFAM: alpha/beta hydrolase fold; KEGG: bbr:BB1064 putative hydrolase YP_001756034.1 TIGRFAM: cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE; KEGG: mex:Mext_1269 cell division topological specificity factor MinE YP_001756035.1 TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: mex:Mext_1268 septum site-determining protein MinD YP_001756036.1 blocks the formation of polar Z-ring septums YP_001756037.1 blocks the formation of polar Z-ring septums YP_001756038.1 TIGRFAM: double-strand break repair helicase AddA; PFAM: UvrD/REP helicase; KEGG: mex:Mext_4440 double-strand break repair helicase AddA YP_001756039.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: mex:Mext_4442 thioredoxin YP_001756040.1 KEGG: mex:Mext_4443 porin YP_001756041.1 TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: mex:Mext_4444 FolC bifunctional protein YP_001756042.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: mex:Mext_4445 acetyl-CoA carboxylase, carboxyl transferase, beta subunit YP_001756043.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis YP_001756044.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mlo:mlr4094 hypothetical protein YP_001756045.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bra:BRADO5494 putative fumarylacetoacetate hydrolase family protein YP_001756046.1 KEGG: bxe:Bxe_B0214 hypothetical protein YP_001756047.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_3787 ROSMUCR transcriptional regulator YP_001756048.1 PFAM: FAD dependent oxidoreductase; KEGG: mex:Mext_2610 FAD dependent oxidoreductase YP_001756049.1 PFAM: LrgB family protein; KEGG: mex:Mext_3644 LrgB family protein YP_001756050.1 PFAM: LrgA family protein; KEGG: mex:Mext_3645 LrgA family protein YP_001756051.1 PFAM: protein of unknown function DUF1332; KEGG: mex:Mext_3646 protein of unknown function DUF1332 YP_001756052.1 PFAM: ThiJ/PfpI domain protein; KEGG: mex:Mext_4368 ThiJ/PfpI domain protein YP_001756053.1 PFAM: TENA/THI-4 domain protein; KEGG: mex:Mext_4454 TenA/THI-4 domain protein YP_001756054.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mex:Mext_4453 response regulator receiver YP_001756055.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: mex:Mext_4452 ATP-binding region ATPase domain protein YP_001756056.1 KEGG: mex:Mext_4451 hypothetical protein YP_001756057.1 PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mex:Mext_4450 DEAD/DEAH box helicase domain protein YP_001756058.1 PFAM: sodium/calcium exchanger membrane region; KEGG: dps:DP0233 calcium/proton antiporter YP_001756059.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: mex:Mext_2125 oxidoreductase FAD-binding domain protein YP_001756060.1 PFAM: oxidoreductase molybdopterin binding; KEGG: mex:Mext_2124 oxidoreductase molybdopterin binding YP_001756061.1 KEGG: mex:Mext_1968 hypothetical protein YP_001756062.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mex:Mext_4181 protein of unknown function DUF6 transmembrane YP_001756063.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3 YP_001756064.1 PFAM: Extracellular ligand-binding receptor; KEGG: mex:Mext_1054 extracellular ligand-binding receptor YP_001756065.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate YP_001756066.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bpt:Bpet3356 phosphoglycerate dehydrogenase YP_001756067.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_4886 TonB-dependent siderophore receptor YP_001756068.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: mex:Mext_4202 hydroxypyruvate isomerase YP_001756069.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: bja:bll2908 hypothetical protein YP_001756070.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: vei:Veis_0764 periplasmic binding protein/LacI transcriptional regulator YP_001756071.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: ret:RHE_CH01847 L-lactate dehydrogenase (cytochrome) protein YP_001756072.1 KEGG: rso:RS04695 putative hemagglutinin-related protein YP_001756073.1 PFAM: major facilitator superfamily MFS_1; KEGG: bmu:Bmul_5368 major facilitator superfamily MFS_1 YP_001756074.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; KEGG: pst:PSPTO_1053 hypothetical protein YP_001756075.1 KEGG: bja:blr4171 hypothetical protein YP_001756076.1 PFAM: ABC-1 domain protein; KEGG: mex:Mext_1021 ABC-1 domain protein YP_001756077.1 TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-4 domain protein; KEGG: rle:pRL110319 putative regulator YP_001756078.1 PFAM: Hpt domain protein; KEGG: mex:Mext_1782 PAS sensor protein YP_001756079.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_2811 ABC transporter related YP_001756080.1 KEGG: kpn:KPN_03482 hypothetical protein YP_001756081.1 KEGG: mex:Mext_2857 hypothetical protein YP_001756083.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bbt:BBta_4906 putative two-component system sensor protein YP_001756084.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: bra:BRADO3244 putative response regulator in two-component reguatory system, sigma54 dependent transcriptional regulator YP_001756085.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_2491 major facilitator superfamily MFS_1 YP_001756086.1 KEGG: mex:Mext_2797 hypothetical protein YP_001756087.1 KEGG: dac:Daci_0564 L-asparaginase, type II; TIGRFAM: L-asparaginase, type II; PFAM: Asparaginase/glutaminase YP_001756088.1 catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate YP_001756089.1 KEGG: mex:Mext_2006 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase YP_001756090.1 PFAM: ABC transporter related; SbmABacA family protein; ABC transporter domain protein; SMART: AAA ATPase; KEGG: mex:Mext_4485 ABC transporter domain protein YP_001756091.1 KEGG: mex:Mext_4486 hypothetical protein YP_001756092.1 KEGG: mmr:Mmar10_1758 hypothetical protein YP_001756093.1 KEGG: mex:Mext_4487 hypothetical protein YP_001756094.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM YP_001756095.1 PFAM: protein of unknown function DUF1009; KEGG: mex:Mext_4677 protein of unknown function DUF1009 YP_001756096.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis YP_001756097.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP YP_001756098.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis YP_001756099.1 TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: mex:Mext_2081 outer membrane protein assembly complex, YaeT protein YP_001756100.1 TIGRFAM: membrane-associated zinc metalloprotease; PFAM: PDZ/DHR/GLGF domain protein; peptidase M50; KEGG: mex:Mext_2082 membrane-associated zinc metalloprotease YP_001756101.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_4101 drug resistance transporter, EmrB/QacA subfamily YP_001756102.1 PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_4102 secretion protein HlyD family protein YP_001756103.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_4103 regulatory protein TetR YP_001756104.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate YP_001756105.1 PFAM: phosphatidate cytidylyltransferase; KEGG: mex:Mext_2084 phosphatidate cytidylyltransferase YP_001756106.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs YP_001756107.1 TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: mex:Mext_2075 uridylate kinase YP_001756109.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu YP_001756110.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit YP_001756111.1 KEGG: mgr:MGG_06060 hypothetical protein YP_001756112.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: mex:Mext_2277 pseudouridine synthase YP_001756113.1 PFAM: methyltransferase small; KEGG: mex:Mext_2276 methyltransferase small YP_001756114.1 TIGRFAM: small GTP-binding protein; GTP-binding protein Era; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; KEGG: mex:Mext_2275 GTP-binding protein Era YP_001756115.1 PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: mex:Mext_2274 ribonuclease III YP_001756116.1 KEGG: mex:Mext_2273 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein YP_001756117.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids YP_001756118.1 involved in the de novo synthesis of pyridoxine (Vitamin B6) YP_001756119.2 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate YP_001756120.1 KEGG: mex:Mext_1938 hypothetical protein YP_001756121.1 PFAM: DNA/RNA non-specific endonuclease; KEGG: mex:Mext_1937 DNA/RNA non-specific endonuclease YP_001756122.1 KEGG: mex:Mext_1936 hypothetical protein YP_001756123.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence YP_001756124.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: gbe:GbCGDNIH1_1716 GDP-mannose dehydratase family YP_001756125.1 KEGG: gdi:GDI0882 hypothetical protein YP_001756126.1 KEGG: mex:Mext_1059 hypothetical protein YP_001756127.1 KEGG: mex:Mext_1058 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_001756128.1 PFAM: molybdopterin binding domain; KEGG: mex:Mext_1057 molybdopterin binding domain YP_001756129.1 KEGG: mex:Mext_1056 xanthine dehydrogenase accessory factor YP_001756130.1 PFAM: protein of unknown function DUF182; KEGG: mex:Mext_1055 protein of unknown function DUF182 YP_001756131.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mex:Mext_2584 ATP-binding region ATPase domain protein YP_001756133.1 KEGG: mex:Mext_2583 hypothetical protein YP_001756134.1 PFAM: aminotransferase class I and II; KEGG: mex:Mext_2582 aminotransferase class I and II YP_001756135.1 KEGG: aor:AO090011000131 predicted protein YP_001756136.1 PFAM: protein of unknown function DUF533; KEGG: oan:Oant_2354 protein of unknown function DUF533 YP_001756137.1 KEGG: mex:Mext_0300 hypothetical protein YP_001756138.1 PFAM: transglutaminase domain protein; KEGG: mlo:mll4861 hypothetical protein YP_001756139.1 PFAM: protein of unknown function DUF900 hydrolase family protein; KEGG: mex:Mext_0299 protein of unknown function DUF900 hydrolase family protein YP_001756140.1 functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins YP_001756141.1 PFAM: CsbD family protein; KEGG: mex:Mext_4729 CsbD family protein YP_001756142.1 TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_4730 3-hydroxybutyrate dehydrogenase YP_001756143.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mex:Mext_0328 ATP-binding region ATPase domain protein YP_001756144.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_0329 response regulator receiver YP_001756145.1 KEGG: mex:Mext_0585 putative membrane protein of unknown function YP_001756146.1 KEGG: mex:Mext_0586 endonuclease III; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein YP_001756147.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase YP_001756148.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_0588 glycosyl transferase family 2 YP_001756149.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_0589 glycosyl transferase family 2 YP_001756150.1 KEGG: mex:Mext_0590 hypothetical protein YP_001756151.1 PFAM: Invasion associated locus B family protein; KEGG: mex:Mext_0591 invasion associated locus B family protein YP_001756152.1 KEGG: mex:Mext_0592 hypothetical protein YP_001756153.1 PFAM: protein of unknown function DUF45; KEGG: mex:Mext_0593 protein of unknown function DUF45 YP_001756154.1 PFAM: peptidase A24A prepilin type IV; KEGG: mex:Mext_2478 peptidase A24A prepilin type IV YP_001756155.1 PFAM: Flp/Fap pilin component; KEGG: nha:Nham_0394 Flp/Fap pilin component YP_001756156.1 KEGG: mex:Mext_2476 hypothetical protein YP_001756157.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: bja:bll0130 hypothetical protein YP_001756158.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_0461 regulatory protein LysR YP_001756159.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: mex:Mext_0463 mandelate racemase/muconate lactonizing protein YP_001756160.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_2347 metallophosphoesterase YP_001756161.1 PFAM: protein of unknown function DUF423; KEGG: mex:Mext_2349 protein of unknown function DUF423 YP_001756162.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential YP_001756163.1 PFAM: 60 kDa inner membrane insertion protein; KEGG: mex:Mext_2351 60 kDa inner membrane insertion protein YP_001756164.1 TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: mex:Mext_2352 ribonuclease P protein component YP_001756165.1 in Escherichia coli transcription of this gene is enhanced by polyamines YP_001756166.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis YP_001756167.1 PFAM: inositol monophosphatase; KEGG: mex:Mext_0601 inositol-phosphate phosphatase YP_001756168.1 catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine YP_001756169.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active YP_001756170.1 KEGG: mex:Mext_1986 hypothetical protein YP_001756171.1 KEGG: mex:Mext_1985 hypothetical protein YP_001756172.1 PFAM: histidinol dehydrogenase; KEGG: mex:Mext_1984 histidinol dehydrogenase YP_001756173.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_1983 hypothetical protein YP_001756174.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: mex:Mext_1982 low molecular weight phosphotyrosine protein phosphatase YP_001756175.1 KEGG: mex:Mext_1927 hypothetical protein YP_001756176.1 PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: mex:Mext_2257 transglutaminase family protein cysteine peptidase BTLCP YP_001756177.1 KEGG: mex:Mext_1810 hypothetical protein YP_001756178.1 PFAM: domain of unknown function DUF1745; KEGG: mex:Mext_1925 domain of unknown function DUF1745 YP_001756179.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_1926 ATP-binding region ATPase domain protein YP_001756180.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_3129 major facilitator superfamily MFS_1 YP_001756181.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_3128 short-chain dehydrogenase/reductase SDR YP_001756182.1 PFAM: SWIB/MDM2 domain protein; KEGG: mex:Mext_3127 SWIB/MDM2 domain protein YP_001756183.1 KEGG: mex:Mext_4176 hypothetical protein YP_001756184.1 PFAM: PRC-barrel domain protein; KEGG: mex:Mext_3126 PRC-barrel domain protein YP_001756185.1 KEGG: mex:Mext_3125 hypothetical protein YP_001756186.1 PFAM: PRC-barrel domain protein; KEGG: mex:Mext_3124 PRC-barrel domain protein YP_001756187.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_3123 major facilitator superfamily MFS_1 YP_001756188.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_3122 ABC transporter related YP_001756189.1 catalyzes the formation of glutamate from glutamine YP_001756190.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_5266 major facilitator superfamily MFS_1 YP_001756191.1 PFAM: protein of unknown function DUF820; KEGG: mex:Mext_4644 protein of unknown function DUF820 YP_001756192.1 PFAM: PfkB domain protein; KEGG: mex:Mext_4645 PfkB domain protein YP_001756193.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_4068 chemotaxis sensory transducer YP_001756194.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_0961 alcohol dehydrogenase zinc-binding domain protein YP_001756195.1 KEGG: mex:Mext_0123 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAS domain containing protein YP_001756196.1 KEGG: mex:Mext_2471 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Exonuclease; Helix-hairpin-helix domain protein class 2 YP_001756197.1 PFAM: protein of unknown function DUF86; KEGG: rpc:RPC_0274 protein of unknown function DUF86 YP_001756198.1 PFAM: DNA polymerase beta domain protein region; KEGG: rpb:RPB_0374 DNA polymerase, beta-like region YP_001756199.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: mex:Mext_2306 uracil-DNA glycosylase superfamily YP_001756200.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mex:Mext_2305 radical SAM domain protein YP_001756201.1 KEGG: mex:Mext_2303 hypothetical protein YP_001756202.1 KEGG: mex:Mext_2302 TRAP-type uncharacterized transport system periplasmic component-like protein YP_001756203.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein YP_001756204.1 PFAM: GrpE protein; KEGG: mex:Mext_0336 ribulose-phosphate 3-epimerase YP_001756205.1 KEGG: mex:Mext_0906 hypothetical protein YP_001756206.1 PFAM: porin; KEGG: mex:Mext_4443 porin YP_001756209.1 KEGG: bbt:BBta_7049 hypothetical protein YP_001756210.1 KEGG: bra:BRADO1007 conserved hypothetical protein; putative signal peptide YP_001756211.1 TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein AraC type; Ada metal-binding domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: pde:Pden_4239 methylated-DNA--protein-cysteine methyltransferase YP_001756212.1 KEGG: mex:Mext_4314 hypothetical protein YP_001756213.1 PFAM: protein of unknown function DUF28; KEGG: mex:Mext_0982 protein of unknown function DUF28 YP_001756214.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: nha:Nham_4176 short chain dehydrogenase YP_001756215.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mex:Mext_0990 HAD-superfamily hydrolase, subfamily IA, variant 3 YP_001756216.1 PFAM: ribulose-phosphate 3-epimerase; KEGG: mex:Mext_0991 ribulose-phosphate 3-epimerase YP_001756217.1 PFAM: phosphoribulokinase/uridine kinase; KEGG: mex:Mext_0980 phosphoribulokinase YP_001756218.1 PFAM: Inositol phosphatase/fructose-16-bisphosphatase; KEGG: mex:Mext_0979 inositol phosphatase/fructose-16-bisphosphatase YP_001756219.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_0978 LysR substrate-binding YP_001756220.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mex:Mext_0977 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001756221.1 PFAM: major facilitator superfamily MFS_1; KEGG: rpb:RPB_2783 major facilitator superfamily MFS_1 YP_001756222.1 PFAM: extracellular solute-binding protein family 3; KEGG: bja:bll4384 probable substrate-binding protein YP_001756223.1 PFAM: Glutathione S-transferase domain; KEGG: rpa:RPA2266 putative glutathione S-transferase YP_001756224.1 PFAM: response regulator receiver; KEGG: mex:Mext_4215 response regulator receiver YP_001756225.1 PFAM: protein of unknown function UPF0118; KEGG: mex:Mext_4214 protein of unknown function UPF0118 YP_001756226.1 KEGG: mex:Mext_1649 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001756227.1 KEGG: mex:Mext_3140 hypothetical protein YP_001756228.1 KEGG: eba:ebA232 ketopantoate reductase ApbA; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein YP_001756229.1 PFAM: FAD linked oxidase domain protein; KEGG: rpc:RPC_2718 FAD linked oxidase-like YP_001756230.1 KEGG: mex:Mext_2379 hypothetical protein YP_001756231.1 KEGG: mex:Mext_2380 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein YP_001756232.1 PFAM: protein of unknown function DUF983; KEGG: mex:Mext_2381 protein of unknown function DUF983 YP_001756233.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_2382 NUDIX hydrolase YP_001756234.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_4418 major facilitator superfamily MFS_1 YP_001756235.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif YP_001756236.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_4408 LysR substrate-binding YP_001756237.1 PFAM: major facilitator superfamily MFS_1; KEGG: rle:RL4388 putative transmembrane permease protein YP_001756238.1 KEGG: mex:Mext_3402 hypothetical protein YP_001756239.1 TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein; KEGG: mex:Mext_2637 aconitate hydratase 1 YP_001756240.1 PFAM: Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mex:Mext_2977 tetratricopeptide TPR_2 repeat protein YP_001756241.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: mex:Mext_2976 leucyl aminopeptidase YP_001756242.1 TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: mex:Mext_1475 chromate transporter, chromate ion transporter (CHR) family YP_001756243.1 KEGG: mex:Mext_2692 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_001756244.1 TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; KEGG: mex:Mext_2691 Cu(I)-responsive transcriptional regulator YP_001756245.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: mex:Mext_2690 heavy metal translocating P-type ATPase YP_001756246.1 PFAM: Glutathione S-transferase domain; KEGG: mex:Mext_2312 glutathione S-transferase domain YP_001756247.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: mex:Mext_2689 histidine kinase YP_001756248.1 KEGG: mex:Mext_2688 putative membrane protein of unknown function YP_001756249.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: mex:Mext_2687 uracil-DNA glycosylase superfamily YP_001756250.1 PFAM: LmbE family protein; KEGG: mex:Mext_2686 LmbE family protein YP_001756251.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_2685 glycosyl transferase group 1 YP_001756252.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: mex:Mext_2684 xylose isomerase domain protein TIM barrel YP_001756253.1 PFAM: protein of unknown function DUF181; KEGG: mex:Mext_2683 protein of unknown function DUF181 YP_001756254.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: mex:Mext_2682 oxidoreductase domain protein YP_001756255.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mex:Mext_2681 methyltransferase type 11 YP_001756256.1 KEGG: mex:Mext_2680 hypothetical protein YP_001756257.1 PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase GAPDH domain protein; KEGG: mex:Mext_2679 inositol-3-phosphate synthase YP_001756258.1 KEGG: mex:Mext_2678 lytic transglycosylase catalytic YP_001756259.1 KEGG: ret:RHE_CH02941 hypothetical protein YP_001756260.1 PFAM: beta-lactamase domain protein; KEGG: mex:Mext_0647 hypothetical protein YP_001756261.1 PFAM: extracellular solute-binding protein family 5; KEGG: xau:Xaut_0290 extracellular solute-binding protein family 5 YP_001756262.1 KEGG: mex:Mext_3948 hypothetical protein YP_001756263.1 KEGG: mex:Mext_1854 hypothetical protein YP_001756265.1 TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; KEGG: msm:MSMEG_1897 3-oxoadipate enol-lactonase YP_001756266.1 KEGG: tdn:Tmden_0155 hypothetical protein YP_001756269.1 PFAM: Protein of unknown function DUF1810; KEGG: mex:Mext_0712 protein of unknown function DUF1810 YP_001756270.1 KEGG: mex:Mext_0706 penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_001756271.1 KEGG: mex:Mext_1255 hypothetical protein YP_001756272.1 PFAM: secretion protein HlyD family protein; KEGG: bra:BRADO5121 putative multidrug resistance protein (HlyD family), EmrA-like YP_001756273.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bra:BRADO5120 putative multidrug resistance protein, EmrB-like YP_001756274.1 Essential for efficient processing of 16S rRNA YP_001756275.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity YP_001756276.1 TIGRFAM: chorismate mutase; PFAM: Chorismate mutase; KEGG: mex:Mext_0652 chorismate mutase YP_001756277.1 KEGG: mex:Mext_0651 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase YP_001756278.1 KEGG: mex:Mext_0650 hypothetical protein YP_001756279.1 KEGG: mex:Mext_0649 hypothetical protein YP_001756280.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: mex:Mext_0648 Rieske (2Fe-2S) domain protein YP_001756281.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mex:Mext_0656 methyltransferase type 11 YP_001756282.1 KEGG: mex:Mext_0658 tRNA (guanine-N1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase YP_001756284.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate YP_001756285.1 TIGRFAM: ammonium transporter; PFAM: Rh family protein/ammonium transporter; KEGG: mex:Mext_2099 ammonium transporter YP_001756286.1 PFAM: nitrogen regulatory protein P-II; KEGG: mex:Mext_2098 nitrogen regulatory protein P-II YP_001756287.1 KEGG: mex:Mext_2097 acyl-CoA thioesterase II; TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase YP_001756288.1 TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; KEGG: mex:Mext_2088 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family YP_001756289.1 KEGG: bja:blr3114 hypothetical protein YP_001756290.1 PFAM: acyltransferase 3; KEGG: cac:CAC3042 O-actetyl transferase related protein YP_001756291.1 PFAM: protein of unknown function DUF861 cupin_3; KEGG: oan:Oant_3611 protein of unknown function DUF861 cupin_3 YP_001756292.1 KEGG: swi:Swit_4009 glycosyl transferase, group 1 YP_001756293.1 PFAM: glycosyl transferase group 1; KEGG: swi:Swit_4009 glycosyl transferase, group 1 YP_001756294.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: mex:Mext_1459 ATPase associated with various cellular activities AAA_3 YP_001756295.1 PFAM: protein of unknown function DUF58; KEGG: mex:Mext_1458 protein of unknown function DUF58 YP_001756296.1 TIGRFAM: conserved hypothetical membrane protein; KEGG: mex:Mext_1457 hypothetical protein YP_001756297.1 KEGG: mex:Mext_1456 hypothetical protein YP_001756298.1 PFAM: extracellular solute-binding protein family 5; KEGG: mex:Mext_0342 extracellular solute-binding protein family 5 YP_001756299.1 PFAM: extracellular solute-binding protein family 5; KEGG: mex:Mext_0343 extracellular solute-binding protein family 5 YP_001756300.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_0344 binding-protein-dependent transport systems inner membrane component YP_001756301.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: mex:Mext_0968 transcriptional regulator, Rrf2 family YP_001756302.1 flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine YP_001756303.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: bur:Bcep18194_B2671 transcriptional regulator, AraC family YP_001756304.1 PFAM: major facilitator superfamily MFS_1; KEGG: mms:mma_1657 transporter of the MFS superfamily YP_001756305.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_0345 GCN5-related N-acetyltransferase YP_001756306.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: xau:Xaut_4936 drug resistance transporter, Bcr/CflA subfamily YP_001756307.1 PFAM: cytochrome c class I; KEGG: mex:Mext_0341 cytochrome c class I YP_001756308.1 KEGG: mex:Mext_0340 3-deoxy-D-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase YP_001756309.1 PFAM: prephenate dehydratase; KEGG: mex:Mext_0339 prephenate dehydratase YP_001756310.1 KEGG: mex:Mext_2078 hypothetical protein YP_001756311.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_2077 GCN5-related N-acetyltransferase YP_001756312.1 catalyzes the hydrolysis of pyrophosphate to phosphate YP_001756313.1 KEGG: smd:Smed_1693 transferase hexapeptide repeat containing protein YP_001756317.1 PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: mex:Mext_0975 protein of unknown function DUF306 MetA and HslJ YP_001756318.1 KEGG: mex:Mext_0976 hypothetical protein YP_001756319.1 PFAM: LmbE family protein; KEGG: mex:Mext_1227 LmbE family protein YP_001756320.1 PFAM: NodS family protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: mex:Mext_3847 methyltransferase type 12 YP_001756321.1 KEGG: mex:Mext_1228 glycosyl transferase family 2 YP_001756322.1 PFAM: HpcH/HpaI aldolase; KEGG: mex:Mext_1802 citrate (pro-3S)-lyase YP_001756323.1 PFAM: phosphoenolpyruvate carboxylase; KEGG: mex:Mext_1801 phosphoenolpyruvate carboxylase YP_001756324.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle YP_001756325.1 catalyzes the formation of malyl-CoA from malate and CoA YP_001756326.1 PFAM: Formiminotransferase-cyclodeaminase; KEGG: mex:Mext_1798 formiminotransferase-cyclodeaminase YP_001756327.1 PFAM: Methylene-tetrahydromethanopterin dehydrogenase; KEGG: mex:Mext_1797 methylenetetrahydrofolate dehydrogenase (NADP(+)) YP_001756328.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: mex:Mext_1796 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_001756329.1 PFAM: aminotransferase class V; KEGG: mex:Mext_1795 serine--glyoxylate transaminase YP_001756330.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_1794 metallophosphoesterase YP_001756331.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_1793 glycosyl transferase group 1 YP_001756332.1 PFAM: ribonuclease HII/HIII; KEGG: mex:Mext_1792 ribonuclease H YP_001756333.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: azc:AZC_1078 histidine kinase YP_001756334.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mex:Mext_1768 radical SAM domain protein YP_001756335.1 KEGG: mex:Mext_1769 hypothetical protein YP_001756336.1 PFAM: amino acid permease-associated region; KEGG: gvi:gll1666 probable amino acid transporter YP_001756337.1 TIGRFAM: molybdenum cofactor synthesis domain protein; molybdenum cofactor biosynthesis protein B; PFAM: molybdopterin binding domain; KEGG: mex:Mext_0995 molybdenum cofactor biosynthesis protein B YP_001756338.1 TIGRFAM: maleylacetoacetate isomerase; PFAM: Glutathione S-transferase domain; KEGG: mex:Mext_2639 maleylacetoacetate isomerase YP_001756339.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mex:Mext_2640 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001756340.1 PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: mex:Mext_2641 ethyl tert-butyl ether degradation EthD YP_001756341.1 KEGG: mex:Mext_2642 hypothetical protein YP_001756342.1 KEGG: mex:Mext_1782 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; SMART: PAC repeat-containing protein YP_001756343.1 PFAM: O-antigen polymerase; KEGG: mex:Mext_1781 hypothetical protein YP_001756344.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: mex:Mext_1778 cobalamin synthesis protein P47K YP_001756345.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: bra:BRADO2650 conserved hypothetical protein; putative signal peptide YP_001756346.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: nha:Nham_3298 heavy metal efflux pump CzcA YP_001756347.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: bbt:BBta_3468 putative outer membrane lipoprotein (NodT-like), RND efflux system YP_001756348.1 PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: rpa:RPA1652 possible flagellar basal-body rod protein FlgG YP_001756349.1 PFAM: protein of unknown function UPF0047; KEGG: mex:Mext_3238 protein of unknown function UPF0047 YP_001756350.1 PFAM: ATP dependent DNA ligase domain protein; ATP dependent DNA ligase; KEGG: mex:Mext_3237 ATP dependent DNA ligase YP_001756351.1 KEGG: mex:Mext_3236 putative mRNA 3-end processing factor YP_001756352.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mex:Mext_3235 methyltransferase type 12 YP_001756353.1 PFAM: protein of unknown function DUF1275; KEGG: mex:Mext_3234 protein of unknown function DUF1275 YP_001756354.1 PFAM: Class I peptide chain release factor; KEGG: xau:Xaut_0332 class I peptide chain release factor YP_001756355.1 PFAM: BolA family protein; KEGG: mex:Mext_3232 BolA family protein YP_001756356.1 PFAM: heat shock protein DnaJ domain protein; KEGG: mex:Mext_3231 heat shock protein DnaJ domain protein YP_001756357.1 KEGG: mex:Mext_3230 cobalt chelatase, pCobS small subunit; TIGRFAM: cobalt chelatase, pCobS small subunit; PFAM: ATPase associated with various cellular activities AAA_5 YP_001756358.1 PFAM: protein of unknown function DUF29; KEGG: rpe:RPE_0134 protein of unknown function DUF29 YP_001756359.1 KEGG: mex:Mext_3229 cobalt chelatase, pCobT subunit; TIGRFAM: cobalt chelatase, pCobT subunit; PFAM: Cobalt chelatase CobT subunit; SMART: von Willebrand factor type A YP_001756360.1 required for 70S ribosome assembly YP_001756361.1 KEGG: mex:Mext_4396 hypothetical protein YP_001756362.1 PFAM: protein of unknown function DUF1330; KEGG: pde:Pden_1110 protein of unknown function DUF1330 YP_001756363.1 KEGG: mex:Mext_4395 hypothetical protein YP_001756364.1 PFAM: helicase domain protein; KEGG: mex:Mext_4394 helicase domain protein YP_001756365.1 PFAM: RNA-binding S4 domain protein; KEGG: mex:Mext_4393 RNA-binding S4 domain protein YP_001756366.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mex:Mext_3879 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_001756367.1 PFAM: transcription factor CarD; KEGG: mex:Mext_3880 transcription factor CarD YP_001756368.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma-32 is responsible for the expression of heat shock promoters; there are paralogs in Rhizobium and Sinorhizobium; the proteins in this cluster act as secondary heat shock sigma factors; the Rhizobium sigma-32 factor may also be involved in exopolysaccharide production YP_001756369.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_1558 major facilitator superfamily MFS_1 YP_001756370.1 TIGRFAM: protein-export protein SecB; PFAM: protein export chaperone SecB; KEGG: mex:Mext_1559 protein-export protein SecB YP_001756371.1 PFAM: import inner membrane translocase subunit Tim44; KEGG: mex:Mext_1560 import inner membrane translocase subunit Tim44 YP_001756372.1 PFAM: MltA domain protein; 3D domain protein; KEGG: mex:Mext_1561 MltA domain protein YP_001756373.1 PFAM: Smr protein/MutS2; KEGG: mex:Mext_1562 Smr protein/MutS2 YP_001756374.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases YP_001756375.1 PFAM: aminodeoxychorismate lyase; KEGG: mex:Mext_0560 aminodeoxychorismate lyase YP_001756376.1 PFAM: PAS fold-3 domain protein; KEGG: mex:Mext_4878 PAS fold-3 domain protein YP_001756377.1 PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: mex:Mext_1999 domain of unknown function DUF1732 YP_001756378.1 Essential for recycling GMP and indirectly, cGMP YP_001756379.1 PFAM: protein of unknown function DUF606; KEGG: mex:Mext_3239 protein of unknown function DUF606 YP_001756380.1 PFAM: Haem oxygenase-like; KEGG: mex:Mext_4082 haem oxygenase YP_001756381.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase dimerisation/phosphoacceptor; Phytochrome central region domain protein; PAS fold-2 domain protein; KEGG: mex:Mext_4081 histidine kinase dimerisation/phosphoacceptor YP_001756382.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: mex:Mext_4080 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001756383.1 TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: mex:Mext_2695 tRNA pseudouridine synthase B YP_001756384.1 PFAM: ribosome-binding factor A; KEGG: mex:Mext_2696 ribosome-binding factor A YP_001756385.1 TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; GTP-binding protein HSR1-related; elongation factor Tu domain 2 protein; translation initiation factor IF-2 domain protein; Initiation factor 2 associated domain protein; KEGG: mex:Mext_2697 translation initiation factor IF-2 YP_001756386.1 PFAM: protein of unknown function DUF448; KEGG: mex:Mext_2698 protein of unknown function DUF448 YP_001756387.1 KEGG: mex:Mext_2699 transcription termination factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: RNA binding S1 domain protein; KH type 1 domain protein; NusA domain protein; SMART: KH domain protein YP_001756388.1 PFAM: protein of unknown function DUF150; KEGG: mex:Mext_2700 protein of unknown function DUF150 YP_001756389.1 PFAM: aldo/keto reductase; KEGG: bbt:BBta_0931 putative oxidoreductase (aldo/keto reductase) YP_001756390.1 PFAM: Ferric reductase domain protein transmembrane component domain; KEGG: xau:Xaut_3512 ferric reductase domain protein transmembrane component domain YP_001756391.1 KEGG: mex:Mext_4643 hypothetical protein YP_001756392.1 KEGG: mex:Mext_1020 hypothetical protein YP_001756393.1 KEGG: mex:Mext_2245 conserved hypothetical protein; putative secreted protein YP_001756394.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: mex:Mext_2244 alcohol dehydrogenase zinc-binding domain protein YP_001756395.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: mex:Mext_2243 single-strand binding protein YP_001756396.1 KEGG: nha:Nham_3495 hypothetical protein YP_001756397.1 KEGG: mex:Mext_3039 hypothetical protein YP_001756398.1 KEGG: mex:Mext_3987 hypothetical protein YP_001756399.1 KEGG: saq:Sare_3286 hypothetical protein YP_001756400.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: xau:Xaut_2759 short-chain dehydrogenase/reductase SDR YP_001756402.1 TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molydopterin dinucleotide-binding region; KEGG: rpc:RPC_1201 oxidoreductase alpha (molybdopterin) subunit YP_001756403.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_B1317 short-chain dehydrogenase YP_001756404.1 TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: mex:Mext_4030 exodeoxyribonuclease III Xth YP_001756405.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: mag:amb4445 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_001756406.1 PFAM: outer membrane lipoprotein carrier protein LolA; KEGG: mex:Mext_4033 outer membrane lipoprotein carrier protein LolA YP_001756407.1 PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: mex:Mext_4034 cell divisionFtsK/SpoIIIE YP_001756408.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers YP_001756409.1 KEGG: mex:Mext_4322 hypothetical protein YP_001756410.1 PFAM: type IV pilus assembly PilZ; KEGG: mex:Mext_4321 type IV pilus assembly PilZ YP_001756411.1 PFAM: histidine triad (HIT) protein; KEGG: mex:Mext_4320 histidine triad (HIT) protein YP_001756412.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: mex:Mext_4319 cation diffusion facilitator family transporter YP_001756413.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_4738 transcriptional regulator, LysR family YP_001756414.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bam:Bamb_4739 short-chain dehydrogenase/reductase SDR YP_001756415.1 KEGG: bra:BRADO0019 hypothetical protein YP_001756416.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_3159 short-chain dehydrogenase/reductase SDR YP_001756417.1 PFAM: protein of unknown function DUF1328; KEGG: mex:Mext_3158 protein of unknown function DUF1328 YP_001756418.1 PFAM: Chloride channel core; KEGG: mex:Mext_3157 chloride channel core YP_001756419.1 KEGG: bam:Bamb_3544 hypothetical protein YP_001756420.1 PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: mex:Mext_2531 deoxyribodipyrimidine photo-lyase YP_001756421.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: azc:AZC_2096 putative autotransporter YP_001756422.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: mex:Mext_2532 TRAP dicarboxylate transporter-DctP subunit YP_001756423.1 KEGG: mex:Mext_2533 protein tyrosine phosphatase YP_001756424.1 PFAM: Extracellular ligand-binding receptor; KEGG: mex:Mext_2534 extracellular ligand-binding receptor YP_001756425.1 PFAM: polysaccharide export protein; KEGG: mex:Mext_3462 polysaccharide export protein YP_001756426.1 KEGG: rme:Rmet_0651 Flp/Fap pilin component YP_001756427.1 KEGG: mex:Mext_2588 hypothetical protein YP_001756428.1 KEGG: mex:Mext_3463 carbohydrate kinase, thermoresistant glucokinase family; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase YP_001756429.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase type 3; KEGG: mex:Mext_3464 Cof-like hydrolase YP_001756430.1 PFAM: Lytic transglycosylase catalytic; KEGG: mex:Mext_3465 lytic transglycosylase catalytic YP_001756431.1 consists of N-terminal helix-turn-helix domain and C-terminal shikimate kinase-like domain which may bind benzoyl-CoA; controls inducible expression of the bzd catabolic operon that is involved in the anaerobic catabolism of benzoate YP_001756432.1 KEGG: mex:Mext_2111 serine O-acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; serine acetyltransferase domain protein YP_001756433.1 KEGG: mex:Mext_2110 hypothetical protein YP_001756434.1 KEGG: mex:Mext_2109 hypothetical protein YP_001756435.1 PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: mex:Mext_2256 transglutaminase family protein cysteine peptidase BTLCP YP_001756437.1 PFAM: transglutaminase family protein cysteine peptidase BTLCP; KEGG: mex:Mext_2257 transglutaminase family protein cysteine peptidase BTLCP YP_001756438.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bja:blr3958 putative acetyl-coenzyme A synthetase YP_001756439.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mlo:mll5584 enoyl-CoA hydratase YP_001756440.1 TIGRFAM: 3-hydroxyisobutyrate dehydrogenase; PFAM: NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: rpd:RPD_3299 3-hydroxyisobutyrate dehydrogenase YP_001756441.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: smd:Smed_4242 enoyl-CoA hydratase/isomerase YP_001756442.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: xau:Xaut_2190 acyl-CoA dehydrogenase domain protein YP_001756443.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: bra:BRADO3137 methylmalonate-semialdehyde dehydrogenase YP_001756444.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rme:Rmet_1605 transcriptional regulator, LysR family YP_001756445.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: sal:Sala_0308 iron-containing alcohol dehydrogenase YP_001756447.1 KEGG: bmf:BAB2_0282 Leu/Ile/Val-binding protein family YP_001756448.1 TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: mex:Mext_2479 Flp pilus assembly protein CpaB YP_001756449.1 PFAM: type II and III secretion system protein; transport-associated; KEGG: mex:Mext_2480 type II and III secretion system protein YP_001756450.1 TIGRFAM: pilus (Caulobacter type) biogenesis lipoprotein CpaD; PFAM: Pilus biogenesis CpaD family protein; KEGG: mex:Mext_2481 pilus (Caulobacter type) biogenesis lipoprotein CpaD YP_001756451.1 KEGG: mex:Mext_2482 putative pilus assembly protein CpaE YP_001756452.1 PFAM: type II secretion system protein E; KEGG: mex:Mext_2483 type II secretion system protein E YP_001756453.1 PFAM: type II secretion system protein; KEGG: mex:Mext_2484 type II secretion system protein YP_001756454.1 PFAM: type II secretion system protein; KEGG: mex:Mext_2485 type II secretion system protein YP_001756455.1 KEGG: mex:Mext_3026 hypothetical protein YP_001756456.1 PFAM: Rhodanese domain protein; KEGG: mex:Mext_2568 rhodanese domain protein YP_001756458.1 PFAM: iron permease FTR1; KEGG: azc:AZC_2743 high-affinity Fe2+/Pb2+ permease YP_001756459.1 KEGG: bcs:BCAN_B0387 hypothetical protein YP_001756460.1 KEGG: rpc:RPC_3632 hypothetical protein YP_001756461.1 KEGG: bpt:Bpet1852 hypothetical protein YP_001756462.1 PFAM: Carbohydrate-selective porin OprB; KEGG: mex:Mext_2010 carbohydrate-selective porin OprB YP_001756463.1 TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; KEGG: mex:Mext_4211 lipoate-protein ligase B YP_001756464.1 PFAM: surface presentation of antigens (SPOA) protein; KEGG: mex:Mext_4210 surface presentation of antigens (SpoA) protein YP_001756465.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: swi:Swit_0986 helix-turn-helix-domain containing protein, AraC type YP_001756466.1 TIGRFAM: oligopeptide transporters, OPT superfamily; oligopeptide transporter, OPT family; PFAM: Oligopeptide transporter OPT superfamily protein; KEGG: nar:Saro_1960 oligopeptide transporter OPT YP_001756467.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mex:Mext_2571 DEAD/DEAH box helicase domain protein YP_001756468.1 KEGG: rpb:RPB_1100 hypothetical protein YP_001756469.1 KEGG: xau:Xaut_4593 hypothetical protein YP_001756470.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: xau:Xaut_3973 efflux transporter, RND family, MFP subunit YP_001756471.1 TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; KEGG: xau:Xaut_4833 heavy metal efflux pump, CzcA family YP_001756472.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: gbe:GbCGDNIH1_1142 molybdopterin dependent oxidoreductase YP_001756473.1 PFAM: protein of unknown function DUF1508; KEGG: mex:Mext_2572 protein of unknown function DUF1508 YP_001756474.1 KEGG: mex:Mext_2573 hypothetical protein YP_001756476.1 PFAM: thioesterase superfamily protein; KEGG: mex:Mext_2575 thioesterase superfamily protein YP_001756477.1 PFAM: superoxide dismutase copper/zinc binding; KEGG: mex:Mext_4310 superoxide dismutase copper/zinc binding YP_001756478.1 TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: mex:Mext_4311 hemolysin A YP_001756479.1 KEGG: mex:Mext_4312 (uracil-5)-methyltransferase YP_001756480.1 KEGG: mex:Mext_2633 hypothetical protein YP_001756481.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: mex:Mext_3613 magnesium and cobalt transport protein CorA YP_001756482.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_4068 chemotaxis sensory transducer YP_001756483.1 PFAM: small multidrug resistance protein; KEGG: dac:Daci_0685 small multidrug resistance protein YP_001756484.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: bja:blr2739 hypothetical methyltransferase YP_001756485.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_3611 short-chain dehydrogenase/reductase SDR YP_001756486.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mex:Mext_3610 enoyl-CoA hydratase/isomerase YP_001756487.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_4104 acyl-CoA dehydrogenase domain protein YP_001756488.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC domain; KEGG: mex:Mext_4105 SUA5/YciO/YrdC/YwlC family protein YP_001756489.1 stationary phase protein that binds TrpR repressor YP_001756490.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_4279 LysR substrate-binding YP_001756491.1 PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: mex:Mext_3876 transcription elongation factor GreA/GreB domain protein YP_001756492.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pfo:Pfl_2006 hypothetical protein YP_001756493.1 TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_3877 quinone oxidoreductase, YhdH/YhfP family YP_001756494.1 KEGG: mex:Mext_3878 hypothetical protein YP_001756495.1 PFAM: cell wall hydrolase SleB; KEGG: mex:Mext_2889 cell wall hydrolase SleB YP_001756496.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter YP_001756497.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme YP_001756498.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors YP_001756499.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit YP_001756500.1 PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mex:Mext_4012 radical SAM domain protein YP_001756501.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA YP_001756502.1 binds directly to 23S ribosomal RNA YP_001756503.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: KOW domain protein; NGN domain protein; KEGG: mex:Mext_3997 transcription termination/antitermination factor NusG YP_001756504.1 TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: mex:Mext_3996 preprotein translocase, SecE subunit YP_001756505.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_001756506.1 PFAM: porin; KEGG: mex:Mext_2745 porin YP_001756507.1 TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; KEGG: bbt:BBta_5841 putative ATP-binding component, PhnN protein YP_001756508.1 TIGRFAM: phosphonate metabolism protein PhnM; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: bja:blr1227 phosphonate metabolism protein YP_001756509.1 KEGG: xau:Xaut_1311 phosphonate C-P lyase system protein PhnL; TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter related; SMART: AAA ATPase YP_001756510.1 KEGG: azc:AZC_3397 phosphonate ABC transporter ATP-binding component; TIGRFAM: phosphonate C-P lyase system protein PhnK; PFAM: ABC transporter related; SMART: AAA ATPase YP_001756511.1 PFAM: GCN5-related N-acetyltransferase; KEGG: azc:AZC_3396 GCN5-related N-acetyltransferase YP_001756512.1 PFAM: phosphonate metabolism PhnJ; KEGG: azc:AZC_3395 putative C-P (carbon-phosphorus) lyase component protein YP_001756513.1 PFAM: phosphonate metabolism; KEGG: rpd:RPD_3827 phosphonate metabolism YP_001756514.1 TIGRFAM: phosphonate C-P lyase system protein PhnH; PFAM: phosphonate metabolism; KEGG: azc:AZC_3393 putative phosphonate metabolism protein YP_001756515.1 TIGRFAM: phosphonate C-P lyase system protein PhnG; PFAM: phosphonate metabolism PhnG; KEGG: xau:Xaut_1316 phosphonate metabolism PhnG YP_001756516.1 TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: xau:Xaut_1317 transcriptional regulator, GntR family YP_001756517.1 TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_1055 phosphonate uptake transporter YP_001756518.1 TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_1056 phosphonate uptake transporter YP_001756519.1 TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; phosphonate ABC transporter, periplasmic phosphonate binding protein; KEGG: oan:Oant_2186 phosphonate ABC transporter, periplasmic phosphonate-binding protein YP_001756520.1 KEGG: xau:Xaut_1322 phosphonate ABC transporter, ATPase subunit; TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_001756521.1 TIGRFAM: phosphonate metabolism protein; PFAM: protein of unknown function DUF1045; KEGG: rsh:Rsph17029_1582 protein of unknown function DUF1045 YP_001756522.1 KEGG: mex:Mext_0714 ceramide glucosyltransferase YP_001756523.1 PFAM: phosphate transporter; KEGG: mex:Mext_4788 phosphate transporter YP_001756525.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_3787 ROSMUCR transcriptional regulator YP_001756526.1 PFAM: major facilitator superfamily MFS_1; KEGG: ppf:Pput_5023 major facilitator superfamily MFS_1 YP_001756527.1 PFAM: pyruvate carboxyltransferase; KEGG: ppf:Pput_5024 pyruvate carboxyltransferase YP_001756528.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ppf:Pput_5025 L-carnitine dehydratase/bile acid-inducible protein F YP_001756529.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pfo:Pfl_1313 transcriptional regulator, LysR family YP_001756530.1 KEGG: mex:Mext_2194 hypothetical protein YP_001756531.1 PFAM: LemA family protein; KEGG: mex:Mext_2020 LemA family protein YP_001756532.1 PFAM: protein of unknown function DUF477; KEGG: mex:Mext_2019 protein of unknown function DUF477 YP_001756533.1 PFAM: protein of unknown function DUF477; KEGG: mex:Mext_2018 protein of unknown function DUF477 YP_001756534.1 PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; glycosyl transferase family 28; KEGG: bja:bll2692 putative glycosyltransferase YP_001756535.1 KEGG: mex:Mext_4002 ferredoxin protein YP_001756536.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mba:Mbar_A1946 putative ferredoxin reductase YP_001756537.1 PFAM: cytochrome P450; KEGG: mex:Mext_4000 cytochrome P450 YP_001756538.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_1016 alcohol dehydrogenase GroES domain protein YP_001756539.1 PFAM: protein of unknown function DUF159; KEGG: acr:Acry_3296 protein of unknown function DUF159 YP_001756540.1 PFAM: Lytic transglycosylase catalytic; KEGG: rpa:RPA1359 possible transglycosylase YP_001756541.1 KEGG: mex:Mext_0100 hypothetical protein YP_001756542.1 KEGG: mex:Mext_4702 hypothetical protein YP_001756544.1 KEGG: mex:Mext_4040 hypothetical protein YP_001756545.1 PFAM: NnrUfamily protein; KEGG: mex:Mext_4041 NnrU family protein YP_001756546.1 KEGG: mex:Mext_4042 hypothetical protein YP_001756547.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains YP_001756548.1 PFAM: glutamate--cysteine ligase GCS2; KEGG: mex:Mext_4045 glutamate--cysteine ligase GCS2 YP_001756549.1 KEGG: mex:Mext_3930 dihydrofolate reductase YP_001756550.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_3931 short-chain dehydrogenase/reductase SDR YP_001756551.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway YP_001756552.1 PFAM: Colicin V production protein; KEGG: mex:Mext_3933 colicin V production protein YP_001756553.1 KEGG: mex:Mext_3937 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein YP_001756554.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents YP_001756555.1 KEGG: mex:Mext_2650 molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB YP_001756556.1 PFAM: protein of unknown function DUF971; KEGG: mex:Mext_2649 protein of unknown function DUF971 YP_001756557.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: azc:AZC_2608 hypothetical protein YP_001756558.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2647 ErfK/YbiS/YcfS/YnhG family protein YP_001756559.1 necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space YP_001756560.1 involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans YP_001756561.1 KEGG: mex:Mext_0417 hypothetical protein YP_001756562.1 KEGG: mex:Mext_0545 glucose-6-phosphate 1-dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase YP_001756563.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bja:blr7608 oxidoreductase YP_001756564.1 PFAM: glycoside hydrolase family 10; KEGG: psp:PSPPH_4536 glycosyl hydrolase, family 10 YP_001756565.1 PFAM: acyltransferase 3; KEGG: bra:BRADO4818 putative acyltransferase; putative membrane protein YP_001756566.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: mex:Mext_4769 peptidoglycan-binding domain 1 protein YP_001756567.1 PFAM: Ferritin Dps family protein; KEGG: mex:Mext_4770 ferritin Dps family protein YP_001756568.1 PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: mex:Mext_4771 GCN5-related N-acetyltransferase YP_001756569.1 PFAM: ROSMUCR transcriptional regulator; KEGG: azc:AZC_1086 putative transcriptional regulator YP_001756570.1 PFAM: restriction endonuclease; KEGG: mex:Mext_4774 restriction endonuclease YP_001756571.1 PFAM: SNARE associated Golgi protein; KEGG: mex:Mext_4503 SNARE associated Golgi protein YP_001756572.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mex:Mext_2595 redoxin domain protein YP_001756573.1 KEGG: ddi:DDBDRAFT_0216653 hypothetical protein YP_001756574.1 PFAM: protein of unknown function DUF179; KEGG: mex:Mext_2596 protein of unknown function DUF179 YP_001756575.1 KEGG: mex:Mext_2959 hypothetical protein YP_001756576.1 KEGG: mex:Mext_2960 chaperone protein DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70 YP_001756577.1 TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ central domain protein; heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: mex:Mext_2961 chaperone protein DnaJ YP_001756578.1 KEGG: mex:Mext_2962 phospholipid N-methyltransferase YP_001756579.1 KEGG: mex:Mext_2963 conserved hypothetical protein; putative secreted protein YP_001756580.1 KEGG: mex:Mext_2964 thymidine phosphorylase; TIGRFAM: pyrimidine-nucleoside phosphorylase; thymidine phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain YP_001756581.1 KEGG: mex:Mext_2965 deoxyribose-phosphate aldolase; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_001756582.1 catalyzes the formation of a purine and ribose phosphate from a purine nucleoside; in E. coli this enzyme functions in xanthosine degradation YP_001756583.1 TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: mex:Mext_2967 cytidine deaminase YP_001756584.1 KEGG: mex:Mext_1375 hypothetical protein YP_001756585.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; possibly involved in prevention of copper toxicity YP_001756586.1 PFAM: glutathione peroxidase; KEGG: mex:Mext_0316 glutathione peroxidase YP_001756587.1 PFAM: Patatin; KEGG: mex:Mext_1598 patatin YP_001756588.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis YP_001756589.1 PFAM: K potassium transporter; KEGG: mex:Mext_1596 K potassium transporter YP_001756590.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mex:Mext_4529 (2Fe-2S)-binding domain protein YP_001756591.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mex:Mext_4528 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_001756592.1 KEGG: mex:Mext_4527 hypothetical protein YP_001756593.1 KEGG: mex:Mext_1332 protein of unknown function DUF1194 YP_001756594.1 KEGG: mex:Mext_2219 hypothetical protein YP_001756595.1 PFAM: Silent information regulator protein Sir2; KEGG: mex:Mext_2216 silent information regulator protein Sir2 YP_001756596.1 PFAM: isochorismatase hydrolase; KEGG: rru:Rru_A0757 isochorismatase hydrolase YP_001756597.1 PFAM: ThiJ/PfpI domain protein; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: azc:AZC_2701 transcriptional regulator YP_001756598.1 catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position YP_001756599.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mpt:Mpe_A3375 ABC transporter ATP-binding protein YP_001756600.1 KEGG: bxe:Bxe_B1361 ABC spermidine/putrescine transporter, periplasmic ligand binding protein YP_001756601.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: vei:Veis_2471 binding-protein-dependent transport systems inner membrane component YP_001756602.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pol:Bpro_1008 binding-protein-dependent transport systems inner membrane component YP_001756603.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response YP_001756604.1 KEGG: mex:Mext_4295 pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding YP_001756605.1 KEGG: mex:Mext_4294 hypothetical protein YP_001756606.1 KEGG: mex:Mext_4324 hypothetical protein YP_001756607.1 KEGG: mlo:mlr2091 hypothetical protein YP_001756608.1 TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: mex:Mext_2592 potassium efflux system protein YP_001756609.1 PFAM: multi antimicrobial extrusion protein MatE; KEGG: mex:Mext_2591 multi antimicrobial extrusion protein MatE YP_001756610.1 KEGG: mex:Mext_2590 conserved hypothetical protein YP_001756611.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: cau:Caur_2180 cupin 2 conserved barrel domain protein YP_001756613.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate YP_001756614.1 PFAM: ATP-cone domain protein; KEGG: mex:Mext_3169 ATP-cone domain protein YP_001756615.1 TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; KEGG: mex:Mext_3168 riboflavin biosynthesis protein RibD YP_001756616.1 TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein; KEGG: mex:Mext_3167 riboflavin synthase, alpha subunit YP_001756617.1 PFAM: thioesterase superfamily protein; KEGG: mex:Mext_2490 thioesterase superfamily protein YP_001756618.1 PFAM: SpoVR family protein; KEGG: mex:Mext_2061 SpoVR family protein YP_001756619.1 PFAM: protein of unknown function DUF444; KEGG: mex:Mext_2060 protein of unknown function DUF444 YP_001756620.1 PFAM: PrkA serine kinase; PrkA AAA domain protein; KEGG: mex:Mext_2059 PrkA AAA domain protein YP_001756621.1 KEGG: mex:Mext_2058 hypothetical protein YP_001756622.1 KEGG: mex:Mext_2057 hypothetical protein YP_001756623.1 PFAM: regulatory protein MerR; KEGG: mex:Mext_2056 regulatory protein MerR YP_001756624.1 PFAM: histone family protein DNA-binding protein; KEGG: mex:Mext_2055 histone family protein DNA-binding protein YP_001756625.1 KEGG: mex:Mext_2054 3-oxoacyl-(acyl-carrier-protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YP_001756626.1 TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; KEGG: mex:Mext_2053 fatty acid/phospholipid synthesis protein PlsX YP_001756627.1 KEGG: mex:Mext_2052 hypothetical protein YP_001756628.1 KEGG: mex:Mext_2051 ubiquinol-cytochrome c chaperone YP_001756629.1 PFAM: SmpA/OmlA domain protein; KEGG: mex:Mext_2050 SmpA/OmlA domain protein YP_001756630.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mex:Mext_2049 HAD-superfamily hydrolase, subfamily IA, variant 1 YP_001756631.1 KEGG: mex:Mext_1117 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001756632.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: mex:Mext_2048 NADH:flavin oxidoreductase/NADH oxidase YP_001756633.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient YP_001756635.1 KEGG: mex:Mext_3160 thiamine-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein domain protein YP_001756636.1 TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: mex:Mext_3161 transcription antitermination factor NusB YP_001756637.1 TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase; KEGG: mex:Mext_3162 6,7-dimethyl-8-ribityllumazine synthase YP_001756638.1 KEGG: kpn:KPN_pKPN5p08190 hypothetical protein YP_001756639.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_4297 short-chain dehydrogenase/reductase SDR YP_001756640.1 KEGG: mex:Mext_4298 hypothetical protein YP_001756641.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_4299 NUDIX hydrolase YP_001756642.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_4300 hypothetical protein YP_001756643.1 KEGG: mex:Mext_4301 hypothetical protein YP_001756644.1 TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: mex:Mext_4304 folate-binding protein YgfZ YP_001756645.1 KEGG: mex:Mext_4305 DNA-3-methyladenine glycosylase I; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase YP_001756646.1 KEGG: mex:Mext_4306 metal-dependent phosphohydrolase HD sub domain YP_001756647.1 KEGG: mex:Mext_4307 hypothetical protein YP_001756648.1 TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; KEGG: mex:Mext_4308 exodeoxyribonuclease VII, small subunit YP_001756649.2 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate YP_001756650.1 KEGG: mex:Mext_4687 tartrate dehydrogenase; TIGRFAM: tartrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_001756651.1 PFAM: CBS domain containing protein; Chloride channel core; KEGG: mex:Mext_2779 chloride channel core YP_001756652.1 KEGG: mex:Mext_3361 hypothetical protein YP_001756653.1 KEGG: mex:Mext_2861 hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_001756654.1 PFAM: response regulator receiver; KEGG: mex:Mext_2860 response regulator receiver YP_001756663.1 PFAM: type IV pilus assembly PilZ; KEGG: mex:Mext_4321 type IV pilus assembly PilZ YP_001756666.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bbt:BBta_7402 putative membrane protein of unknown function YP_001756667.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: swi:Swit_0986 helix-turn-helix-domain containing protein, AraC type YP_001756668.1 KEGG: mex:Mext_3889 uncharacterized protein-like protein YP_001756669.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mex:Mext_3888 RNA polymerase sigma factor, sigma-70 family YP_001756670.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: bcn:Bcen_2902 alkylhydroperoxidase AhpD core YP_001756672.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: drm:Dred_1362 pyridoxal-5'-phosphate-dependent enzyme, beta subunit YP_001756673.1 KEGG: ngo:NGO0508 hypothetical protein, putative phage associated protein YP_001756675.1 KEGG: nwi:Nwi_0626 autoinducer synthesis protein YP_001756677.1 PFAM: Extracellular ligand-binding receptor; KEGG: xau:Xaut_5024 extracellular ligand-binding receptor YP_001756678.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bbt:BBta_0225 putative 3-oxoacyl-(acyl-carrier-protein) reductase 1 (fabG1) YP_001756680.1 KEGG: mdo:100027887 similar to type IIA procollagen YP_001756681.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mlo:mll3697 RNA polymerase sigma factor YP_001756682.1 PFAM: isochorismatase hydrolase; KEGG: bpa:BPP3583 hypothetical protein YP_001756683.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: mex:Mext_2279 Sel1 domain protein repeat-containing protein YP_001756684.1 PFAM: Asparaginase/glutaminase; KEGG: kra:Krad_3608 asparaginase/glutaminase YP_001756685.1 KEGG: bja:bll6650 hypothetical protein YP_001756686.1 PFAM: MCP methyltransferase CheR-type; KEGG: mex:Mext_1533 protein-glutamate O-methyltransferase YP_001756687.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: mex:Mext_1532 protein-glutamate methylesterase YP_001756688.1 PFAM: response regulator receiver; KEGG: rpe:RPE_4282 response regulator receiver protein YP_001756689.1 PFAM: CheW domain protein; KEGG: mex:Mext_1530 CheW domain protein YP_001756690.1 PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: mex:Mext_1529 ATP-binding region ATPase domain protein YP_001756691.1 KEGG: mex:Mext_1528 hypothetical protein YP_001756692.1 PFAM: glutamate-ammonia ligase adenylyltransferase; KEGG: mex:Mext_0326 (glutamate--ammonia-ligase) adenylyltransferase YP_001756693.1 PFAM: inositol monophosphatase; KEGG: mex:Mext_1527 inositol monophosphatase YP_001756694.1 KEGG: bbt:BBta_6562 hypothetical protein YP_001756695.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_1791 hypothetical protein YP_001756696.1 KEGG: mex:Mext_1790 hypothetical protein YP_001756697.1 KEGG: mex:Mext_1789 hypothetical protein YP_001756698.1 KEGG: mex:Mext_1788 hypothetical protein YP_001756699.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: mex:Mext_1787 diaminopimelate decarboxylase YP_001756700.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_0347 glycosyl transferase family 2 YP_001756701.1 KEGG: mex:Mext_2455 hypothetical protein YP_001756702.1 KEGG: rpb:RPB_1494 beta-lactamase YP_001756703.1 PFAM: protein of unknown function DUF1446; KEGG: bra:BRADO1397 hypothetical protein YP_001756704.1 TIGRFAM: citrate/H+ symporter, CitMHS family; PFAM: Citrate transporter; KEGG: bur:Bcep18194_A4510 citrate transporter YP_001756705.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bmu:Bmul_1930 transcriptional regulator, LysR family YP_001756706.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: mjl:Mjls_3329 amidohydrolase 3 YP_001756707.1 KEGG: mex:Mext_2633 hypothetical protein YP_001756708.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: bch:Bcen2424_3339 ABC transporter related YP_001756709.1 PFAM: GCN5-related N-acetyltransferase; regulatory protein MarR; KEGG: hne:HNE_3038 transcriptional regulator, MarR family/acetyltransferase, GNAT family protein YP_001756710.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mlo:mll6710 transcriptional regulator YP_001756711.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_0748 alpha/beta hydrolase fold YP_001756712.1 KEGG: mex:Mext_0749 hypothetical protein YP_001756713.1 KEGG: mex:Mext_0750 hypothetical protein YP_001756714.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_3147 chemotaxis sensory transducer YP_001756715.1 KEGG: mlo:mll4559 aliphatic sulfonate binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3 YP_001756716.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rpd:RPD_2413 TonB-dependent receptor, plug YP_001756717.1 PFAM: CopG domain protein DNA-binding domain protein; NikR nickel binding; KEGG: spt:SPA3435 nickel responsive regulator YP_001756718.1 PFAM: PepSY-associated TM helix domain protein; KEGG: mex:Mext_4119 PepSY-associated TM helix domain protein YP_001756719.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_4121 TonB-dependent siderophore receptor YP_001756720.1 PFAM: Hydratase/decarboxylase; KEGG: mpt:Mpe_A0408 putative decarboxylase YP_001756722.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_2585 response regulator receiver YP_001756723.1 PFAM: regulatory protein MarR; KEGG: mex:Mext_2586 regulatory protein MarR YP_001756724.1 catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway. YP_001756725.1 PFAM: formate-tetrahydrofolate ligase FTHFS; KEGG: mex:Mext_0414 formate--tetrahydrofolate ligase YP_001756726.1 PFAM: OmpA/MotB domain protein; KEGG: hch:HCH_04311 outer membrane protein and related peptidoglycan-associated (LipO)protein YP_001756727.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mex:Mext_3111 tetratricopeptide TPR_2 repeat protein YP_001756728.1 PFAM: FAD dependent oxidoreductase; electron transfer flavoprotein-ubiquinone oxidoreductase; KEGG: mex:Mext_4247 electron-transferring-flavoprotein dehydrogenase YP_001756729.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: mex:Mext_4246 phage SPO1 DNA polymerase-related protein YP_001756730.1 PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: mex:Mext_4245 protein of unknown function zinc metallopeptidase putative YP_001756731.1 KEGG: mex:Mext_3988 hypothetical protein YP_001756732.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_0192 ABC transporter related YP_001756733.1 KEGG: mex:Mext_2123 hypothetical protein YP_001756734.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE YP_001756735.1 PFAM: beta-lactamase; KEGG: bbt:BBta_4439 putative beta-lactamase YP_001756736.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: smd:Smed_3507 YbaK/EbsC protein YP_001756737.1 KEGG: mex:Mext_2241 hypothetical protein YP_001756738.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine YP_001756739.1 PFAM: phosphate-selective porin O and P; KEGG: mex:Mext_3657 phosphate-selective porin O and P YP_001756740.1 PFAM: EAL domain protein; KEGG: mex:Mext_0416 EAL domain protein YP_001756741.1 PFAM: MltA-interacting MipA family protein; KEGG: xau:Xaut_1031 MltA-interacting MipA family protein YP_001756742.1 PFAM: Heavy metal transport/detoxification protein; KEGG: mex:Mext_0415 heavy metal transport/detoxification protein YP_001756744.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs YP_001756745.1 TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; KEGG: mex:Mext_1584 methyltransferase GidB YP_001756746.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: mex:Mext_1585 cobyrinic acid ac-diamide synthase YP_001756747.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: mex:Mext_1586 ParB-like partition protein YP_001756748.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pfl:PFL_2762 hypothetical protein YP_001756749.1 required for the assembly and function of the DNAX complex which are required for the assembly of the beta subunit onto primed DNA YP_001756750.1 KEGG: mex:Mext_1588 hypothetical protein YP_001756751.1 PFAM: Auxin Efflux Carrier; KEGG: acr:Acry_2889 auxin efflux carrier YP_001756752.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: smd:Smed_2192 TonB-dependent siderophore receptor YP_001756753.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: mex:Mext_1570 acid phosphatase YP_001756755.1 KEGG: mex:Mext_1571 hypothetical protein YP_001756756.1 KEGG: mex:Mext_1574 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; PFAM: transferase hexapeptide repeat containing protein YP_001756757.1 PFAM: cyclic nucleotide-binding; KEGG: mex:Mext_1575 cyclic nucleotide-binding YP_001756758.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_1576 response regulator receiver YP_001756759.1 KEGG: mex:Mext_1577 hypothetical protein YP_001756760.1 PFAM: alanine racemase domain protein; KEGG: mex:Mext_1578 alanine racemase domain protein YP_001756761.1 TIGRFAM: leucyl-tRNA synthetase; KEGG: mex:Mext_1579 leucyl-tRNA synthetase YP_001756762.1 SMART: extracellular solute-binding protein family 3; KEGG: rso:RS04698 hypothetical periplasmic substrate binding ABC transporter protein YP_001756763.1 PFAM: Integral membrane protein TerC; KEGG: mex:Mext_1566 integral membrane protein TerC YP_001756764.1 similar to YegS from E. coli YP_001756765.1 KEGG: mex:Mext_1568 hypothetical protein YP_001756766.1 KEGG: mex:Mext_1569 hypothetical protein YP_001756767.1 PFAM: Aldose 1-epimerase; KEGG: mex:Mext_2873 aldose 1-epimerase YP_001756768.1 PFAM: ETC complex I subunit conserved region; KEGG: oan:Oant_4634 ETC complex I subunit conserved region YP_001756770.1 KEGG: mex:Mext_4264 hypothetical protein YP_001756771.1 PFAM: heat shock protein Hsp20; KEGG: pde:Pden_3146 heat shock protein HSP20 YP_001756772.1 PFAM: heat shock protein Hsp20; KEGG: mex:Mext_4263 heat shock protein HSP20 YP_001756773.1 PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: mex:Mext_2101 cell divisionFtsK/SpoIIIE YP_001756774.1 KEGG: mex:Mext_0662 translation initiation factor, aIF-2BI family; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related YP_001756775.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: azc:AZC_1518 hypothetical protein YP_001756776.1 PFAM: MaoC domain protein dehydratase; KEGG: mex:Mext_2486 MaoC domain protein dehydratase YP_001756777.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1 YP_001756778.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation YP_001756780.1 PFAM: protein of unknown function DUF893 YccS/YhfK; KEGG: gbe:GbCGDNIH1_0403 integral membrane protein YP_001756781.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bam:Bamb_5168 transcriptional regulator, LysR family YP_001756782.1 PFAM: Citrate carrier protein; KEGG: bmu:Bmul_3390 citrate carrier protein YP_001756783.1 PFAM: HpcH/HpaI aldolase; KEGG: vei:Veis_3048 citryl-CoA lyase YP_001756784.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bur:Bcep18194_B1719 L-carnitine dehydratase/bile acid-inducible protein F YP_001756785.1 PFAM: amidohydrolase 2; KEGG: bra:BRADO3864 conserved hypothetical protein; putative amidohydrolase; putative exported protein YP_001756786.1 PFAM: MmgE/PrpD family protein; KEGG: bpl:BURPS1106A_A2918 MmgE/PrpD family protein YP_001756787.1 PFAM: amidohydrolase 2; KEGG: bra:BRADO3864 conserved hypothetical protein; putative amidohydrolase; putative exported protein YP_001756788.1 PFAM: amidohydrolase 2; KEGG: bra:BRADO3864 conserved hypothetical protein; putative amidohydrolase; putative exported protein YP_001756789.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bja:blr2277 hypothetical protein YP_001756790.1 PFAM: major facilitator superfamily MFS_1; KEGG: rpc:RPC_2715 major facilitator superfamily MFS_1 YP_001756791.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: bpt:Bpet0386 putative transferase YP_001756792.1 PFAM: Phosphogluconate dehydrogenase, NAD-binding, putative-like; KEGG: bja:blr2279 hypothetical protein YP_001756793.1 PFAM: FAD linked oxidase domain protein; KEGG: rpc:RPC_2718 FAD linked oxidase-like YP_001756794.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bch:Bcen2424_5395 major facilitator superfamily MFS_1 YP_001756795.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: bja:blr2275 transcriptional regulatory protein YP_001756798.1 PFAM: RelA/SpoT domain protein; KEGG: aha:AHA_3012 region found in RelA / SpoT proteins YP_001756799.1 SMART: helix-turn-helix domain protein; KEGG: mag:amb1736 predicted transcriptional regulator YP_001756802.1 KEGG: xau:Xaut_1087 AAA ATPase YP_001756803.1 KEGG: aba:Acid345_3545 hypothetical protein YP_001756804.1 PFAM: Resolvase domain; KEGG: mex:Mext_2451 resolvase domain YP_001756806.1 KEGG: bpt:Bpet0975 hypothetical protein YP_001756807.1 KEGG: fal:FRAAL4591 hypothetical protein YP_001756809.1 KEGG: tcr:504239.220 mucin-associated surface protein (MASP) Pfam: Vicilin_N PROSITE: ALA_RICH CHEMOTAXIS_TRANSDUC_2 YP_001756810.1 KEGG: ent:Ent638_0809 lytic transglycosylase, catalytic YP_001756811.1 PFAM: transposase IS4 family protein; KEGG: rxy:Rxyl_2506 transposase, IS4 YP_001756812.1 KEGG: sco:SCP1.214 putative transposase YP_001756813.1 KEGG: tcr:511487.170 mucin-associated surface protein (MASP) Pfam: Mucin PROSITE: ALA_RICH YP_001756814.1 PFAM: integrase family protein; KEGG: bja:bll5003 similar to site-specific integrase/recombinase YP_001756815.1 KEGG: mex:Mext_0184 hypothetical protein YP_001756816.1 KEGG: mex:Mext_0807 hypothetical protein YP_001756818.1 KEGG: sen:SACE_6069 hypothetical protein YP_001756819.1 KEGG: mex:Mext_1961 hypothetical protein YP_001756820.1 KEGG: mex:Mext_4429 hypothetical protein YP_001756823.1 PFAM: PAS fold-3 domain protein; KEGG: mex:Mext_3528 PAS fold-3 domain protein YP_001756824.1 KEGG: mex:Mext_2648 hypothetical protein YP_001756827.1 KEGG: mex:Mext_4601 hypothetical protein YP_001756828.1 KEGG: tcr:507969.10 vesicular transport-associated repeat protein Pfam: Plasmodium_HRP S-antigen PROSITE: ALA_RICH ARG_RICH GLU_RICH YP_001756829.1 KEGG: mex:Mext_4578 patatin YP_001756830.1 KEGG: rxy:Rxyl_1766 hypothetical protein YP_001756831.1 KEGG: mex:Mext_4709 hypothetical protein YP_001756832.1 KEGG: bte:BTH_II0853 transcriptional regulator, AraC family YP_001756834.1 KEGG: pen:PSEEN1996 hypothetical protein YP_001756835.1 PFAM: Helix-turn-helix type 11 domain protein; KEGG: swi:Swit_0146 helix-turn-helix, type 11 domain protein YP_001756836.1 PFAM: Glutathione S-transferase domain; KEGG: swi:Swit_0145 glutathione S-transferase, N-terminal domain YP_001756839.1 KEGG: azc:AZC_0471 hypothetical protein YP_001756840.1 KEGG: mlo:mlr2091 hypothetical protein YP_001756841.1 KEGG: mex:Mext_4443 porin YP_001756843.1 KEGG: mex:Mext_3063 diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001756844.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gvi:gll0132 hypothetical protein YP_001756845.1 KEGG: mex:Mext_2629 hypothetical protein YP_001756846.1 KEGG: mex:Mext_0430 hypothetical protein YP_001756847.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mex:Mext_4137 response regulator receiver YP_001756848.1 KEGG: mex:Mext_4138 hypothetical protein YP_001756849.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: mex:Mext_4139 40-residue YVTN family beta-propeller repeat protein YP_001756850.1 KEGG: mex:Mext_4140 MxaD protein, putative YP_001756851.1 SMART: von Willebrand factor type A; KEGG: mex:Mext_4141 von Willebrand factor type A YP_001756852.1 KEGG: mex:Mext_4142 hypothetical protein YP_001756853.1 SMART: von Willebrand factor type A; KEGG: mex:Mext_4143 von Willebrand factor type A YP_001756854.1 KEGG: mex:Mext_4144 MxaA protein, putative YP_001756855.1 KEGG: mex:Mext_4145 hypothetical protein YP_001756856.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mex:Mext_4146 ATPase associated with various cellular activities AAA_3 YP_001756857.1 PFAM: methanol dehydrogenase beta subunit; KEGG: mex:Mext_4147 methanol dehydrogenase beta subunit YP_001756858.1 PFAM: cytochrome c class I; KEGG: mex:Mext_4148 cytochrome c class I YP_001756859.1 SMART: extracellular solute-binding protein family 3; KEGG: mex:Mext_4149 extracellular solute-binding protein family 3 YP_001756860.1 TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: Pyrrolo-quinoline quinone; KEGG: mex:Mext_4150 PQQ-dependent dehydrogenase, methanol/ethanol family YP_001756861.1 KEGG: mex:Mext_4151 hypothetical protein YP_001756862.1 PFAM: cytochrome P450; KEGG: mex:Mext_1330 cytochrome P450 YP_001756863.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: mex:Mext_1331 diguanylate cyclase YP_001756864.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bpt:Bpet0409 D-3-phosphoglycerate dehydrogenase YP_001756865.1 PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: xau:Xaut_2672 oxidoreductase molybdopterin binding YP_001756866.1 KEGG: xau:Xaut_2671 putative sulfite:cytochrome c oxidoreductase subunit B YP_001756868.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; CHASE3 domain protein; KEGG: sme:SMa1103 probable adenylate cyclase YP_001756869.1 KEGG: mex:Mext_0239 TRAP-type uncharacterized transport system periplasmic component-like protein YP_001756870.1 PFAM: protein of unknown function DUF606; KEGG: mex:Mext_3965 protein of unknown function DUF606 YP_001756871.1 PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: mex:Mext_3966 arsenical pump membrane protein YP_001756872.1 PFAM: metallophosphoesterase; KEGG: sil:SPO1819 phosphodiesterase YP_001756873.1 KEGG: mex:Mext_1175 hypothetical protein YP_001756874.1 PFAM: NLPA lipoprotein; KEGG: dac:Daci_1782 NlpA lipoprotein YP_001756875.1 PFAM: ABC transporter related; DNA-directed DNA polymerase B; SMART: AAA ATPase; KEGG: dac:Daci_1781 ABC transporter related YP_001756876.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_1780 binding-protein-dependent transport systems inner membrane component YP_001756877.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bbt:BBta_2571 putative acyl-CoA dehydrogenase YP_001756878.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: bbt:BBta_2572 putative acyl-CoA dehydrogenase YP_001756879.1 KEGG: bbt:BBta_2573 putative luciferase-like protein, putative alkanesulfonate monooxygenase YP_001756880.1 PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: ana:all2911 glutamine transport system substrate-binding protein YP_001756881.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mca:MCA2706 transcriptional regulator, AraC family YP_001756882.1 TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Autotransporter beta- domain protein; KEGG: azc:AZC_1504 putative serine protease YP_001756884.1 SMART: response regulator receiver; KEGG: mex:Mext_1965 response regulator receiver YP_001756885.1 KEGG: mex:Mext_0915 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001756886.1 PFAM: protein of unknown function DUF892; KEGG: mex:Mext_1129 protein of unknown function DUF892 YP_001756887.1 KEGG: mex:Mext_4423 hypothetical protein YP_001756889.1 KEGG: mex:Mext_4704 hypothetical protein YP_001756890.1 KEGG: mex:Mext_3520 hypothetical protein YP_001756892.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_2834 ROSMUCR transcriptional regulator YP_001756894.1 KEGG: dre:555805 zgc:162320 YP_001756896.1 PFAM: GAF domain protein; KEGG: mex:Mext_3629 GAF domain protein YP_001756897.1 KEGG: mex:Mext_3986 porin YP_001756898.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mex:Mext_0060 glyoxalase/bleomycin resistance protein/dioxygenase YP_001756899.1 KEGG: mes:Meso_3126 hypothetical protein YP_001756900.1 PFAM: major facilitator superfamily MFS_1; KEGG: bbt:BBta_2213 putative transport protein (MFS superfamily) YP_001756901.1 PFAM: extracellular solute-binding protein family 5; KEGG: bja:blr3931 probable substrate-binding protein YP_001756902.1 KEGG: bra:BRADO0046 conserved hypothetical protein; putative transcriptional regulatory protein HTH type YP_001756903.1 PFAM: PAS fold-3 domain protein; KEGG: ccr:CC_0836 sensor histidine kinase, putative YP_001756904.1 KEGG: mex:Mext_0057 hypothetical protein YP_001756905.1 KEGG: mex:Mext_0088 hypothetical protein YP_001756906.1 KEGG: mex:Mext_0189 hypothetical protein YP_001756907.1 PFAM: adenylate cyclase; KEGG: azc:AZC_3492 hypothetical protein YP_001756908.1 PFAM: NUDIX hydrolase; KEGG: smd:Smed_0390 NUDIX hydrolase YP_001756909.1 KEGG: bja:bll0596 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001756910.1 KEGG: mex:Mext_3412 hypothetical protein YP_001756911.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: sme:SMa2349 putative xanthine dehydrogenase iron-sulfur-binding subunit YP_001756912.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: aav:Aave_1486 molybdopterin dehydrogenase, FAD-binding YP_001756913.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bra:BRADO2884 putative xanthine dehydrogenase, molybdenum binding subunit YP_001756915.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rpe:RPE_2818 TonB-dependent receptor YP_001756916.1 PFAM: SOUL heme-binding protein; KEGG: rpd:RPD_3441 SOUL heme-binding protein YP_001756917.1 KEGG: mex:Mext_0802 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001756918.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rpc:RPC_4889 PAS/PAC sensor hybrid histidine kinase YP_001756919.1 PFAM: response regulator receiver; KEGG: atu:Atu1989 two component response regulator YP_001756920.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Phytochrome central region domain protein; PAS fold-2 domain protein; KEGG: atc:AGR_C_3620 cyanobacterial phytochrome B YP_001756921.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; KEGG: bvi:Bcep1808_3598 uncharacterized peroxidase-related enzyme YP_001756922.1 KEGG: rle:RL0971 hypothetical protein YP_001756923.1 KEGG: rso:RSc0250 hypothetical protein YP_001756924.1 KEGG: bpl:BURPS1106A_A0317 hypothetical protein YP_001756925.1 KEGG: nwi:Nwi_2469 hypothetical protein YP_001756926.1 KEGG: mlo:mll0172 hypothetical protein YP_001756927.1 PFAM: glutathionylspermidine synthase; KEGG: mex:Mext_4658 glutathionylspermidine synthase YP_001756928.1 KEGG: mex:Mext_4659 integral membrane protein-like protein YP_001756929.1 PFAM: protein of unknown function DUF350; KEGG: mex:Mext_4660 protein of unknown function DUF350 YP_001756930.1 TIGRFAM: HAD-superfamily subfamily IIA hydrolase like protein; HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mex:Mext_1499 HAD-superfamily hydrolase, subfamily IIA YP_001756931.1 TIGRFAM: esterase, PHB depolymerase family; PFAM: putative esterase; phospholipase/Carboxylesterase; KEGG: mex:Mext_1483 esterase, PHB depolymerase family YP_001756932.1 KEGG: mex:Mext_1485 DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease YP_001756933.1 KEGG: mex:Mext_0856 hypothetical protein YP_001756934.1 KEGG: mex:Mext_1488 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase YP_001756935.1 TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: mex:Mext_1489 shikimate 5-dehydrogenase YP_001756936.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: mex:Mext_1490 cation diffusion facilitator family transporter YP_001756937.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: mex:Mext_1491 maf protein YP_001756938.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes YP_001756939.1 KEGG: mex:Mext_1557 hypothetical protein YP_001756940.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG YP_001756942.1 May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine YP_001756943.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors YP_001756944.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pde:Pden_0940 transcriptional regulator, LysR family YP_001756945.1 TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: bpt:Bpet2326 putative aspartate racemase YP_001756946.1 KEGG: mex:Mext_1496 hypothetical protein YP_001756947.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_1495 hypothetical protein YP_001756948.1 KEGG: mex:Mext_1494 uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D) YP_001756949.1 PFAM: protein of unknown function DUF299; KEGG: mex:Mext_1493 protein of unknown function DUF299 YP_001756950.1 KEGG: mex:Mext_1998 hypothetical protein YP_001756951.1 SMART: Calcium-binding EF-hand-containing protein; KEGG: mex:Mext_1854 hypothetical protein YP_001756952.1 KEGG: mex:Mext_0868 hypothetical protein YP_001756953.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mex:Mext_0867 tetratricopeptide TPR_2 repeat protein YP_001756954.1 KEGG: mex:Mext_0866 von Willebrand factor type A YP_001756955.1 PFAM: von Willebrand factor type A; KEGG: mex:Mext_0865 von Willebrand factor type A YP_001756956.1 KEGG: mex:Mext_0864 hypothetical protein YP_001756957.1 KEGG: mex:Mext_0863 hypothetical protein YP_001756958.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: mex:Mext_0862 ATPase associated with various cellular activities AAA_3 YP_001756959.1 PFAM: MgtC/SapB transporter; KEGG: mex:Mext_0861 MgtC/SapB transporter YP_001756960.1 KEGG: mex:Mext_0859 hypothetical protein YP_001756961.1 PFAM: NLP/P60 protein; KEGG: mex:Mext_0858 NLP/P60 protein YP_001756962.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway YP_001756963.1 KEGG: mex:Mext_2594 homoserine kinase; TIGRFAM: homoserine kinase; PFAM: aminoglycoside phosphotransferase YP_001756964.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate YP_001756965.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: mex:Mext_2522 RND efflux system, outer membrane lipoprotein, NodT family YP_001756966.1 PFAM: acriflavin resistance protein; KEGG: mex:Mext_2521 acriflavin resistance protein YP_001756967.1 PFAM: acriflavin resistance protein; KEGG: mex:Mext_2520 acriflavin resistance protein YP_001756968.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_2519 efflux transporter, RND family, MFP subunit YP_001756970.1 PFAM: aminotransferase class V; aminotransferase class I and II; KEGG: mex:Mext_2517 aminotransferase class I and II YP_001756971.1 KEGG: mex:Mext_2516 hypothetical protein YP_001756972.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_2515 binding-protein-dependent transport systems inner membrane component YP_001756973.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_4463 ROSMUCR transcriptional regulator YP_001756974.1 PFAM: FAD linked oxidase domain protein; KEGG: mex:Mext_0923 FAD linked oxidase domain protein YP_001756975.1 KEGG: mes:Meso_2737 KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein; sugar isomerase (SIS) YP_001756976.1 KEGG: mex:Mext_3137 hypothetical protein YP_001756977.1 PFAM: nitroreductase; KEGG: mex:Mext_4435 nitroreductase YP_001756978.1 PFAM: GSCFA domain protein; KEGG: mex:Mext_4847 GSCFA domain protein YP_001756979.1 KEGG: mex:Mext_2079 hypothetical protein YP_001756980.1 PFAM: response regulator receiver; KEGG: mex:Mext_4845 response regulator receiver YP_001756981.1 TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; KEGG: mex:Mext_4843 peptidoglycan-associated lipoprotein YP_001756982.1 TIGRFAM: tol-pal system protein YbgF; PFAM: Tetratricopeptide TPR_4; KEGG: mex:Mext_4842 tol-pal system protein YbgF YP_001756983.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: mex:Mext_4841 tRNA(Ile)-lysidine synthetase YP_001756984.1 KEGG: mex:Mext_4840 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_001756985.1 PFAM: protein of unknown function DUF81; KEGG: mex:Mext_4839 protein of unknown function DUF81 YP_001756986.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate YP_001756987.1 KEGG: mex:Mext_0193 hypothetical protein YP_001756988.1 PFAM: porin; KEGG: mex:Mext_4837 hypothetical protein YP_001756989.1 KEGG: mex:Mext_4835 porin YP_001756991.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: mex:Mext_4834 HNH endonuclease YP_001756992.1 PFAM: MscS Mechanosensitive ion channel; KEGG: mex:Mext_4833 MscS mechanosensitive ion channel YP_001756993.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; KEGG: mlo:mll2240 hypothetical protein YP_001756994.1 PFAM: SCP-like extracellular; KEGG: mex:Mext_4832 SCP-like extracellular YP_001756995.1 responsible for transport of beta-1,2-glucans from the cytoplasm to periplasm; inner membrane ABC transporter permease component; Cgt; ChvA; NdvA YP_001756996.1 PFAM: ribonuclease BN; KEGG: mex:Mext_2230 ribonuclease BN YP_001756997.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mex:Mext_2229 protein of unknown function DUF6 transmembrane YP_001756998.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rieske [2Fe-2S] domain protein; KEGG: bxe:Bxe_B1329 putative dioxygenase, ferredoxin reductase component YP_001756999.1 KEGG: mex:Mext_3113 hypothetical protein YP_001757000.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_2228 acyl-CoA dehydrogenase domain protein YP_001757001.1 KEGG: mex:Mext_2227 diguanylate cyclase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; SMART: PAS domain containing protein YP_001757002.1 KEGG: mex:Mext_2226 hypothetical protein YP_001757003.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_2225 glycosyl transferase group 1 YP_001757004.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_2224 glycosyl transferase group 1 YP_001757005.1 TIGRFAM: phasin; KEGG: mex:Mext_2223 phasin YP_001757006.1 KEGG: mex:Mext_2222 hypothetical protein YP_001757007.1 PFAM: cell wall hydrolase/autolysin; KEGG: mex:Mext_3661 N-acetylmuramoyl-L-alanine amidase YP_001757008.1 KEGG: mex:Mext_3662 penicillin-binding protein, 1A family; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_001757009.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis YP_001757010.1 TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS; KEGG: mex:Mext_0598 phosphoribosylformylglycinamidine synthase, PurS YP_001757011.1 KEGG: mex:Mext_0597 putative exported protein of unknown function YP_001757012.1 PFAM: response regulator receiver; KEGG: mex:Mext_0596 response regulator receiver YP_001757013.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_0595 ATP-binding region ATPase domain protein YP_001757014.1 TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: mex:Mext_0594 polyhydroxyalkanoate depolymerase, intracellular YP_001757015.1 PFAM: extracellular solute-binding protein family 5; KEGG: azc:AZC_2015 ABC transporter substrate binding protein YP_001757016.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:blr3342 ABC transporter permease protein YP_001757017.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_2013 oligopeptide ABC transporter permease protein YP_001757018.1 KEGG: bra:BRADO3022 ABC transporter ATP-binding protein, putative oligo/dipeptide transport protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_001757019.1 KEGG: bja:blr3345 ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_001757020.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides YP_001757021.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azc:AZC_1952 ABC transporter ATP-binding protein YP_001757022.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpt:Bpet0411 ABC transporter permease protein YP_001757023.1 PFAM: conserved hypothetical protein; KEGG: bja:blr3189 hypothetical protein YP_001757024.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_2834 ROSMUCR transcriptional regulator YP_001757026.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: rpb:RPB_1648 ABC transporter related YP_001757027.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bam:Bamb_1486 peptidase M20 YP_001757028.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_0810 peptide ABC transporter permease protein YP_001757029.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_0811 peptide ABC transporter permease protein YP_001757030.1 PFAM: extracellular solute-binding protein family 5; KEGG: azc:AZC_0812 peptide ABC transporter periplasmic peptide-binding protein YP_001757031.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: azc:AZC_0813 transcriptional regulator YP_001757032.1 KEGG: mlo:mlr5488 hypothetical protein YP_001757033.1 PFAM: CDP-diacylglycerol pyrophosphatase; KEGG: cvi:CV_4315 CDP-diacylglycerol pyrophosphatase YP_001757034.1 KEGG: bpd:BURPS668_A2069 hypothetical protein YP_001757036.1 KEGG: mex:Mext_4051 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001757037.1 PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: mex:Mext_1298 DEAD/DEAH box helicase domain protein YP_001757038.1 PFAM: protein of unknown function DUF336; KEGG: mex:Mext_4158 protein of unknown function DUF336 YP_001757039.1 PFAM: PAS fold-3 domain protein; KEGG: mex:Mext_4512 hypothetical protein YP_001757040.1 KEGG: atc:AGR_C_4327 N-carbamoyl-beta-alanine amidohydrolase; TIGRFAM: amidase, hydantoinase/carbamoylase family; PFAM: peptidase M20 YP_001757041.1 KEGG: mex:Mext_3584 hypothetical protein YP_001757042.1 KEGG: cvi:CV_1605 hypothetical protein YP_001757043.1 KEGG: mex:Mext_2778 hypothetical protein YP_001757044.1 KEGG: mex:Mext_2777 hypothetical protein YP_001757045.1 KEGG: mex:Mext_4172 hypothetical protein YP_001757046.1 KEGG: mex:Mext_2625 hypothetical protein YP_001757047.1 KEGG: bja:bll1555 hypothetical protein YP_001757048.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: noc:Noc_2410 transcriptional regulatory protein, LysR family YP_001757049.1 PFAM: YceI family protein; KEGG: gdi:GDI1483 hypothetical protein YP_001757050.1 PFAM: cytochrome B561; KEGG: gdi:GDI1482 putative cytochrome b561 YP_001757051.1 PFAM: YceI family protein; KEGG: gdi:GDI1481 hypothetical protein YP_001757052.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_0992 GCN5-related N-acetyltransferase YP_001757053.1 PFAM: Orn/Lys/Arg decarboxylase major region; aromatic amino acid beta-eliminating lyase/threonine aldolase; Orn/Lys/Arg decarboxylase domain protein; KEGG: mex:Mext_0993 ornithine decarboxylase YP_001757054.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bbr:BB1529 putative dehydrogenase YP_001757055.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: bbt:BBta_0629 putative ferric siderophore receptor protein YP_001757056.1 KEGG: rpc:RPC_1596 hypothetical protein YP_001757057.1 KEGG: nha:Nham_0684 O-succinylhomoserine (thiol)-lyase; TIGRFAM: O-succinylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_001757058.1 PFAM: cytochrome B561; KEGG: mex:Mext_0231 cytochrome b561 YP_001757059.1 PFAM: Catalase domain protein; KEGG: mex:Mext_0230 catalase domain protein YP_001757060.1 PFAM: BLUF domain protein; KEGG: mex:Mext_4031 BLUF domain protein YP_001757061.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; KEGG: mex:Mext_4032 diguanylate cyclase YP_001757062.1 PFAM: Acetamidase/Formamidase; KEGG: bbt:BBta_5975 putative acetamidase/formamidase family protein YP_001757063.1 PFAM: helicase domain protein; KEGG: mex:Mext_0811 helicase domain protein YP_001757064.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bmu:Bmul_5325 transcriptional regulator, LysR family YP_001757065.1 PFAM: major facilitator superfamily MFS_1; KEGG: bja:blr0485 hypothetical protein YP_001757066.1 PFAM: ferredoxin; adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mex:Mext_3083 adenylyl cyclase class-3/4/guanylyl cyclase YP_001757067.1 TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG); KEGG: mex:Mext_0935 DNA-3-methyladenine glycosylase YP_001757068.1 KEGG: bra:BRADO2659 putative amidase expression-regulating protein YP_001757069.1 PFAM: ANTAR domain protein; KEGG: bbt:BBta_2995 hypothetical protein YP_001757070.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: bra:BRADO2656 putative N-carbamoyl-D-amino acid hydrolase YP_001757071.1 PFAM: Extracellular ligand-binding receptor; KEGG: bbt:BBta_2993 putative exported protein of unknown function YP_001757072.1 PFAM: inner-membrane translocator; KEGG: bbt:BBta_2992 putative membrane protein of unknown function YP_001757073.1 PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: bbt:BBta_2991 putative branched-chain amino acid ABC tranpsorter, ATP binding protein YP_001757074.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_C1307 ABC branched chain amino acid family transporter, ATPase subunit YP_001757075.1 PFAM: protein of unknown function DUF1028; KEGG: pmy:Pmen_3267 protein of unknown function DUF1028 YP_001757076.1 PFAM: Amidase; KEGG: nfa:nfa12060 putative amidase YP_001757077.1 KEGG: mex:Mext_0456 hypothetical protein YP_001757078.1 PFAM: protein of unknown function DUF1236; KEGG: mex:Mext_0457 protein of unknown function DUF1236 YP_001757079.1 KEGG: gbe:GbCGDNIH1_1133 chemotaxis protein methyltransferase; TIGRFAM: PAS sensor protein; PFAM: CheB methylesterase; MCP methyltransferase CheR-type; HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001757080.1 TIGRFAM: PAS sensor protein; KEGG: gbe:GbCGDNIH1_1132 sensory transduction protein kinase YP_001757081.1 KEGG: rpd:RPD_3087 ATP-binding region, ATPase-like; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAC repeat-containing protein YP_001757083.1 KEGG: gdi:GDI0596 hypothetical protein YP_001757084.1 KEGG: mex:Mext_3720 hypothetical protein YP_001757085.1 KEGG: mex:Mext_4768 Holliday junction DNA helicase RuvB; TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_001757086.1 PFAM: Glutathione S-transferase domain; KEGG: bbt:BBta_7359 putative glutathione S-transferase YP_001757087.1 PFAM: extracellular solute-binding protein family 5; KEGG: bja:blr3931 probable substrate-binding protein YP_001757088.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: mex:Mext_2291 diguanylate cyclase YP_001757089.1 KEGG: dsh:Dshi_2291 protein of unknown function DUF306 MetA and HslJ YP_001757090.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: rle:RL4053 putative AraC family transcriptional regulator YP_001757091.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mex:Mext_0210 (2Fe-2S)-binding domain protein YP_001757092.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mex:Mext_0211 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_001757093.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pmy:Pmen_1100 short-chain dehydrogenase/reductase SDR YP_001757094.1 TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rru:Rru_A3031 2-phosphoglycolate phosphatase YP_001757095.1 PFAM: protein of unknown function DUF417; KEGG: spq:SPAB_02993 hypothetical protein YP_001757096.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: mms:mma_0914 carboxymuconolactone decarboxylase YP_001757097.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: bur:Bcep18194_C7057 transcriptional regulator, AraC family YP_001757098.1 PFAM: regulatory protein TetR; KEGG: xau:Xaut_2103 transcriptional regulator, TetR family YP_001757099.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: xau:Xaut_0183 acyl-CoA dehydrogenase domain protein YP_001757100.1 KEGG: rsh:Rsph17029_0022 acetyl-CoA acetyltransferases; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase YP_001757101.1 PFAM: aminoglycoside phosphotransferase; KEGG: ppu:PP_2791 aminoglycoside phosphotransferase YP_001757102.1 KEGG: mxa:MXAN_6419 tetratricopeptide repeat protein YP_001757104.1 PFAM: CsbD family protein; KEGG: mex:Mext_0367 CsbD family protein YP_001757105.1 PFAM: CsbD family protein; KEGG: mex:Mext_0366 CsbD family protein YP_001757106.1 KEGG: mex:Mext_0365 conserved hypothetical membrane spanning protein YP_001757107.1 PFAM: CsbD family protein; KEGG: mex:Mext_0364 CsbD family protein YP_001757108.1 KEGG: acr:Acry_3194 CsbD family protein YP_001757109.1 KEGG: pap:PSPA7_0636 transcriptional regulator, LuxR family; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001757110.1 KEGG: mex:Mext_4462 RNA polymerase sigma factor, sigma-70 family YP_001757111.1 KEGG: mex:Mext_1012 putative exported protein of unknown function YP_001757112.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: fal:FRAAL2309 cyclomaltodextrinase YP_001757113.1 PFAM: protein of unknown function YGGT; KEGG: mex:Mext_3782 protein of unknown function YGGT YP_001757114.1 PFAM: MaoC domain protein dehydratase; KEGG: mex:Mext_3781 MaoC domain protein dehydratase YP_001757115.1 KEGG: pde:Pden_0415 outer membrane protein YP_001757116.1 PFAM: Formaldehyde-activating enzyme (Fae); KEGG: mex:Mext_3143 formaldehyde-activating enzyme (Fae) YP_001757117.1 PFAM: helix-turn-helix HxlR type; KEGG: rpc:RPC_2243 putative transcriptional regulator YP_001757118.1 PFAM: NAD(P)H dehydrogenase (quinone); NADPH-dependent FMN reductase; KEGG: mex:Mext_2035 NAD(P)H dehydrogenase (quinone) YP_001757119.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_3329 ErfK/YbiS/YcfS/YnhG family protein YP_001757120.1 KEGG: rno:679678 hypothetical protein LOC679678 YP_001757121.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_3327 efflux transporter, RND family, MFP subunit YP_001757122.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mex:Mext_3326 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family YP_001757123.1 PFAM: extracellular solute-binding protein family 5; KEGG: bra:BRADO2512 putative oligopeptide ABC transporter (substrate-binding protein) YP_001757124.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bja:bll2876 ABC transporter permease protein YP_001757125.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bra:BRADO2510 putative oligopeptide ABC transporter (permease protein) YP_001757126.1 KEGG: bja:bll2874 ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_001757127.1 KEGG: bja:bll2873 ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_001757128.1 TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: gox:GOX2653 integral membrane protein YP_001757129.1 PFAM: MEKHLA domain protein; KEGG: ret:RHE_CH01749 hypothetical protein YP_001757130.1 KEGG: mex:Mext_0613 major royal jelly protein YP_001757131.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: rpa:pRPA2 partition protein YP_001757132.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: mex:Mext_0834 peptidase M20 YP_001757133.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mex:Mext_0835 (2Fe-2S)-binding domain protein YP_001757134.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: mex:Mext_0836 molybdopterin dehydrogenase FAD-binding YP_001757135.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mex:Mext_0837 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_001757136.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mex:Mext_0839 protein of unknown function DUF6 transmembrane YP_001757138.1 PFAM: Glutathione S-transferase domain; KEGG: bte:BTH_I1237 glutathione S-transferase, putative YP_001757139.1 PFAM: peptidase M48 Ste24p; KEGG: mex:Mext_3303 peptidase M48 Ste24p YP_001757140.1 PFAM: nucleic acid binding OB-fold tRNA/helicase-type; KEGG: mex:Mext_3304 hypothetical protein YP_001757141.1 PFAM: helix-turn-helix domain protein; KEGG: mex:Mext_3305 helix-turn-helix domain protein YP_001757142.1 PFAM: S-adenosylmethionine synthetase; KEGG: mex:Mext_3306 methionine adenosyltransferase YP_001757143.1 PFAM: putative methyltransferase; KEGG: mex:Mext_3307 tRNA (guanine-N(7)-)-methyltransferase YP_001757144.1 KEGG: mex:Mext_3300 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; SMART: PAS domain containing protein YP_001757145.1 KEGG: mex:Mext_3299 hypothetical protein YP_001757146.1 PFAM: manganese and iron superoxide dismutase; KEGG: mex:Mext_3298 superoxide dismutase YP_001757147.1 TIGRFAM: integral membrane protein MviN; PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; KEGG: mex:Mext_3297 integral membrane protein MviN YP_001757148.1 TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mex:Mext_3296 haloacid dehalogenase, type II YP_001757149.1 KEGG: mex:Mext_3295 hypothetical protein YP_001757150.1 PFAM: Carbamoyltransferase; KEGG: mex:Mext_3294 carbamoyltransferase YP_001757151.1 PFAM: Na+/H+ antiporter NhaA; KEGG: mex:Mext_3287 Na+/H+ antiporter NhaA YP_001757152.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: mex:Mext_3288 redoxin domain protein YP_001757153.1 TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: mex:Mext_3289 argininosuccinate lyase YP_001757154.1 KEGG: bra:BRADO5230 hypothetical protein YP_001757155.1 KEGG: mex:Mext_3290 hypothetical protein YP_001757156.1 KEGG: mex:Mext_3291 hypothetical protein YP_001757157.1 KEGG: mex:Mext_3292 hypothetical protein YP_001757158.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mex:Mext_3293 HAD-superfamily hydrolase, subfamily IA, variant 3 YP_001757159.1 KEGG: mex:Mext_3286 hypothetical protein YP_001757160.1 KEGG: mex:Mext_3280 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001757161.1 TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; KEGG: mex:Mext_3281 peptide methionine sulfoxide reductase YP_001757163.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: scl:sce1232 pentachlorophenol 4-monooxygenase YP_001757164.1 PFAM: regulatory protein TetR; KEGG: rpc:RPC_2069 transcriptional regulator, TetR family YP_001757165.1 D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm YP_001757166.1 PFAM: PRC-barrel domain protein; KEGG: mex:Mext_3285 PRC-barrel domain protein YP_001757167.1 PFAM: Putative ParB-like nuclease; KEGG: mex:Mext_0727 putative ParB-like nuclease YP_001757168.1 KEGG: rru:Rru_A2208 hypothetical protein YP_001757169.1 KEGG: mex:Mext_2665 hypothetical protein YP_001757170.1 TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; KEGG: mex:Mext_2664 fumarate hydratase, class II YP_001757171.1 PFAM: cytochrome P450; KEGG: mex:Mext_2663 cytochrome P450 YP_001757172.1 PFAM: protein of unknown function DUF1321; KEGG: mex:Mext_2662 protein of unknown function DUF1321 YP_001757173.1 PFAM: Abortive infection protein; KEGG: mex:Mext_2661 abortive infection protein YP_001757174.1 PFAM: thymidylate synthase; KEGG: mex:Mext_2660 thymidylate synthase YP_001757175.1 PFAM: dihydrofolate reductase region; KEGG: mex:Mext_2659 dihydrofolate reductase YP_001757176.1 TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: mex:Mext_2658 HflK protein YP_001757177.1 TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: mex:Mext_2657 HflC protein YP_001757178.1 KEGG: mex:Mext_2656 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_001757179.1 KEGG: rpe:RPE_2699 hypothetical protein YP_001757180.1 KEGG: mex:Mext_2655 phosphoserine phosphatase SerB; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase YP_001757181.1 KEGG: mex:Mext_2654 tRNA delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase YP_001757182.1 PFAM: oxidoreductase domain protein; NADP oxidoreductase coenzyme F420-dependent; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: mex:Mext_2653 6-phosphogluconate dehydrogenase NAD-binding YP_001757183.1 PFAM: carbon starvation protein CstA; KEGG: mex:Mext_2017 carbon starvation protein CstA YP_001757184.1 PFAM: protein of unknown function DUF466; KEGG: mex:Mext_2016 protein of unknown function DUF466 YP_001757185.1 KEGG: mex:Mext_1249 hypothetical protein YP_001757186.1 KEGG: mex:Mext_4373 hypothetical protein YP_001757187.1 PFAM: acriflavin resistance protein; KEGG: mex:Mext_3856 acriflavin resistance protein YP_001757188.1 catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide YP_001757189.1 KEGG: mex:Mext_2770 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; AAA ATPase YP_001757190.1 PFAM: cyclic nucleotide-binding; EAL domain protein; KEGG: amr:AM1_0714 EAL and cyclic nucleotide-binding domain protein YP_001757191.1 PFAM: aminoglycoside phosphotransferase; protein of unknown function UPF0079; protein of unknown function DUF227; KEGG: mex:Mext_4431 protein of unknown function UPF0079 YP_001757192.1 PFAM: Nucleotidyl transferase; KEGG: mex:Mext_4430 nucleotidyl transferase YP_001757193.1 PFAM: glycosyl transferase family 2; KEGG: smd:Smed_4246 glycosyl transferase family 2 YP_001757194.1 KEGG: rle:RL3815 putative glycosyl hydrolase YP_001757195.1 PFAM: glucose-methanol-choline oxidoreductase; NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; FAD dependent oxidoreductase; GMC oxidoreductase; Male sterility domain; KEGG: mes:Meso_2585 glucose-methanol-choline oxidoreductase YP_001757196.1 PFAM: glycosyl transferase group 1; KEGG: smd:Smed_4583 glycosyl transferase group 1 YP_001757197.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: sme:SMb21070 putative MPA1 family auxiliary surface saccharide export protein, similar to chain-length determination proteins YP_001757198.1 PFAM: glycosyl transferase family 2; glycosyl transferase group 1; KEGG: bbt:BBta_1060 putative glycosyl transferase group 1 YP_001757199.1 KEGG: sse:Ssed_3007 hypothetical protein YP_001757200.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sse:Ssed_3008 hydrolase (HAD superfamily)-like protein YP_001757201.1 PFAM: glycosyl transferase family 2; KEGG: mpt:Mpe_A0726 putative glycosyltransferase protein YP_001757202.1 PFAM: glycosyl transferase group 1; KEGG: ava:Ava_1139 glycosyl transferase, group 1 YP_001757203.1 PFAM: polysaccharide biosynthesis protein; KEGG: bbt:BBta_1044 putative membrane protein of unknown function with polysaccharide biosynthesis protein domain YP_001757204.1 PFAM: polysaccharide export protein; KEGG: sme:SMb21073 putative OMA family outer membrane saccharide export protein, similar to ExoF YP_001757205.1 KEGG: rpa:RPA3345 hypothetical protein YP_001757206.1 KEGG: gdi:GDI1716 putative amine oxidase YP_001757207.1 PFAM: glycosyl transferase group 1; KEGG: rpa:RPA3352 glycosyltransferase YP_001757208.1 PFAM: sugar transferase; KEGG: mes:Meso_0653 sugar transferase YP_001757210.1 KEGG: rpc:RPC_2599 collagen triple helix repeat YP_001757211.1 KEGG: mxa:MXAN_7241 cyclic nucleotide-binding/patatin-like phospholipase domain protein YP_001757212.1 PFAM: acyltransferase 3; KEGG: swi:Swit_1329 acyltransferase 3 YP_001757213.1 PFAM: dienelactone hydrolase; phospholipase/Carboxylesterase; KEGG: bra:BRADO4625 conserved hypothetical protein; putative alpha/beta-hydrolases superfamily protein YP_001757214.1 catalyzes the hydrolysis of allophanate YP_001757215.1 PFAM: polysaccharide deacetylase; KEGG: jan:Jann_2944 polysaccharide deacetylase YP_001757216.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mms:mma_3084 sulfonate/nitrate transport system ATP-binding protein YP_001757217.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA2678 putative permease protein, subunit of ABC transporter YP_001757218.1 PFAM: NMT1/THI5 like domain protein; KEGG: rpb:RPB_2838 twin-arginine translocation pathway signal YP_001757219.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gbe:GbCGDNIH1_1637 transcriptional regulators, LysR family YP_001757220.1 PFAM: transcriptional regulator domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bbt:BBta_1118 putative transcriptional regulatory protein, HTH DNA binding domain YP_001757221.1 PFAM: alpha/beta hydrolase fold; KEGG: bpl:BURPS1106A_A2941 hydrolase, alpha/beta fold family YP_001757222.1 KEGG: bja:blr1198 putative cytochrome P460 YP_001757223.1 TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: bpt:Bpet3966 hypothetical protein YP_001757224.1 KEGG: bbr:BB0947 putative transport system ATP-binding protein; TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_001757225.1 TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmw:Mmwyl1_0999 phosphonate ABC transporter, inner membrane subunit YP_001757226.1 TIGRFAM: phosphonate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bpt:Bpet3969 binding-protein-dependent transport system permease protein YP_001757227.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; KEGG: bbt:BBta_2082 putative peptidase M20D, amidohydrolase YP_001757228.1 PFAM: extracellular solute-binding protein family 5; KEGG: bbt:BBta_6955 oligopeptide ABC transporter (substrate-binding protein) YP_001757229.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bra:BRADO1094 oligopeptide transport system permease protein (ABC superfamily, OppBC subfamily) YP_001757230.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbt:BBta_6953 oligopeptide ABC transporter (permease protein) YP_001757231.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: bja:bll6709 probable ATP-binding protein YP_001757232.1 KEGG: aeh:Mlg_1010 hypothetical protein YP_001757233.1 KEGG: mag:amb3449 hypothetical protein YP_001757234.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: aeh:Mlg_1012 diguanylate cyclase YP_001757235.1 PFAM: histidine kinase HAMP region domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: mag:amb3453 serine phosphatase RsbU, regulator of sigma subunit YP_001757236.1 KEGG: xcv:XCV0874 hypothetical protein YP_001757237.1 PFAM: periplasmic binding protein; KEGG: atc:AGR_C_4467 hemin-binding periplasmic protein HmuT precursor YP_001757238.1 PFAM: transport system permease protein; KEGG: smd:Smed_2340 transport system permease protein YP_001757239.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: atc:AGR_C_4465 putative ATP-binding protein of ABC transport system YP_001757240.1 TIGRFAM: TonB-dependent hemoglobin/transferrin/lactoferrin family receptor; TonB-dependent heme/hemoglobin receptor family protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: rpc:RPC_1973 TonB-dependent haem/haemoglobin receptor YP_001757241.1 PFAM: glycosyl transferase family 2; KEGG: cmi:CMM_0830 putative glycosyltransferase YP_001757242.1 PFAM: glycosyl transferase family 2; KEGG: swi:Swit_4535 glycosyl transferase, family 2 YP_001757244.1 PFAM: acyltransferase 3; KEGG: bxe:Bxe_B2282 putative acyltransferase YP_001757246.1 PFAM: sugar transferase; KEGG: mes:Meso_0653 sugar transferase YP_001757249.1 PFAM: glycoside hydrolase family 16; KEGG: mlo:mlr5264 endo-1,3-1,4-beta-glycanase ExoK YP_001757250.1 PFAM: glycosyl transferase family 2; KEGG: sme:SMb20948 glucosyltransferase protein YP_001757255.1 KEGG: mex:Mext_1948 nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_001757257.1 PFAM: regulatory protein LuxR; KEGG: rle:pRL90149 putative transcriptional regulator YP_001757258.1 KEGG: sme:SMb20956 putative glucosyltransferase protein YP_001757259.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: bra:BRADO2234 putative exopolysaccharide polymerization protein YP_001757260.1 PFAM: polysaccharide export protein; KEGG: bja:blr6311 putative exopolysaccharide production protein YP_001757261.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: rsh:Rsph17029_3687 transferase hexapeptide repeat containing protein YP_001757262.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; homoserine dehydrogenase NAD-binding; KEGG: mag:amb0126 predicted dehydrogenase and related protein YP_001757263.1 PFAM: aminotransferase class V; Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rsh:Rsph17029_3689 DegT/DnrJ/EryC1/StrS aminotransferase YP_001757264.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: rsh:Rsph17029_3690 NAD-dependent epimerase/dehydratase YP_001757265.1 PFAM: aminotransferase class V; DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: rsh:Rsph17029_3691 DegT/DnrJ/EryC1/StrS aminotransferase YP_001757266.1 PFAM: polysaccharide deacetylase; KEGG: rxy:Rxyl_1932 polysaccharide deacetylase YP_001757267.1 PFAM: glycosyl transferase family 2; KEGG: rca:Rcas_3100 glycosyl transferase family 2 YP_001757268.1 PFAM: glycosyl transferase group 1; KEGG: aav:Aave_4407 glycosyl transferase, family 2 YP_001757269.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gur:Gura_2358 ABC transporter related YP_001757270.1 PFAM: ABC-2 type transporter; KEGG: gur:Gura_2359 ABC-2 type transporter YP_001757271.1 PFAM: glycosyl transferase family 2; KEGG: bra:BRADO4753 succinoglycan biosynthesis protein ExoA YP_001757272.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate YP_001757273.1 KEGG: rpc:RPC_0667 polysaccharide biosynthesis protein YP_001757274.1 KEGG: bbt:BBta_5467 hypothetical protein YP_001757276.1 KEGG: mex:Mext_2569 hypothetical protein YP_001757277.1 PFAM: protein of unknown function UPF0061; KEGG: mex:Mext_4180 protein of unknown function UPF0061 YP_001757278.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mex:Mext_0666 tRNA/rRNA methyltransferase (SpoU) YP_001757279.1 PFAM: PRC-barrel domain protein; KEGG: azc:AZC_0981 hypothetical protein YP_001757280.1 PFAM: electron transport protein SCO1/SenC; KEGG: mex:Mext_3224 electron transport protein SCO1/SenC YP_001757281.1 PFAM: type IV pilus assembly PilZ; KEGG: mex:Mext_2258 type IV pilus assembly PilZ YP_001757282.1 PFAM: protein of unknown function DUF1457; KEGG: mex:Mext_2259 protein of unknown function DUF1457 YP_001757283.1 PFAM: Rhomboid family protein; KEGG: mex:Mext_2260 rhomboid family protein YP_001757284.1 PFAM: CBS domain containing protein; KEGG: mex:Mext_2262 CBS domain containing protein YP_001757285.1 KEGG: bja:blr0534 putative alkaline phosphatase YP_001757286.1 PFAM: Patatin; KEGG: mex:Mext_2263 patatin YP_001757287.1 PFAM: phosphoribosyl-AMP cyclohydrolase; KEGG: mex:Mext_2264 phosphoribosyl-AMP cyclohydrolase YP_001757288.1 PFAM: GTP cyclohydrolase I; KEGG: mex:Mext_2265 GTP cyclohydrolase I YP_001757289.1 PFAM: nitrogen-fixing NifU domain protein; KEGG: mex:Mext_2266 nitrogen-fixing NifU domain protein YP_001757290.1 PFAM: protein of unknown function DUF37; KEGG: mex:Mext_2267 protein of unknown function DUF37 YP_001757291.1 KEGG: bja:blr3887 pyridoxal phosphate biosynthesis protein; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA YP_001757292.1 KEGG: bja:blr3886 hypothetical protein YP_001757293.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rpc:RPC_1157 GntR-like YP_001757294.1 transports degraded pectin products into the bacterial cell YP_001757295.1 KEGG: mex:Mext_1961 hypothetical protein YP_001757296.1 KEGG: mex:Mext_0444 hypothetical protein YP_001757297.1 PFAM: chemotaxis sensory transducer; KEGG: mex:Mext_2643 chemotaxis sensory transducer YP_001757298.1 TIGRFAM: ribonuclease, Rne/Rng family; KEGG: mex:Mext_3659 ribonuclease, Rne/Rng family YP_001757299.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: mex:Mext_3151 protein of unknown function DUF224 cysteine-rich region domain protein YP_001757300.1 PFAM: FAD linked oxidase domain protein; KEGG: mex:Mext_4787 FAD linked oxidase domain protein YP_001757301.1 KEGG: mex:Mext_4786 membrane protein involved in the export of O-antigen and teichoic acid-like protein YP_001757302.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: azc:AZC_1078 histidine kinase YP_001757303.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_2047 GCN5-related N-acetyltransferase YP_001757304.1 PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: mex:Mext_2045 Orn/DAP/Arg decarboxylase 2 YP_001757305.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_2044 GCN5-related N-acetyltransferase YP_001757306.1 PFAM: protein of unknown function DUF1611; KEGG: mex:Mext_2676 protein of unknown function DUF1611 YP_001757307.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: mex:Mext_2677 mandelate racemase/muconate lactonizing protein YP_001757308.1 KEGG: bbt:BBta_4226 hypothetical protein YP_001757309.1 PFAM: protein of unknown function DUF1491; KEGG: mex:Mext_0698 protein of unknown function DUF1491 YP_001757310.1 KEGG: mex:Mext_2767 hypothetical protein YP_001757311.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: mex:Mext_0699 peptidoglycan-binding domain 1 protein YP_001757312.1 KEGG: mex:Mext_0700 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein YP_001757313.1 KEGG: mex:Mext_0701 hypothetical protein YP_001757314.1 KEGG: mex:Mext_0697 hypothetical protein YP_001757315.1 KEGG: mex:Mext_4709 hypothetical protein YP_001757316.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mex:Mext_1004 GCN5-related N-acetyltransferase YP_001757318.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_4463 ROSMUCR transcriptional regulator YP_001757319.1 PFAM: thioesterase superfamily protein; KEGG: bbr:BB3094 hypothetical protein YP_001757320.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis YP_001757321.1 KEGG: mex:Mext_0674 conserved hypothetical protein; putative deoxyribonuclease YP_001757322.1 KEGG: dvl:Dvul_0861 conserved hypothetical protein, putative DNA helicase YP_001757323.1 KEGG: azc:AZC_3707 hypothetical protein YP_001757324.1 PFAM: peptidase M41; AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: mag:amb1687 ATP-dependent Zn protease YP_001757327.1 PFAM: protein of unknown function DUF1006; KEGG: mes:Meso_1021 protein of unknown function DUF1006 YP_001757328.1 PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: bja:blr5158 potassium-tellurite ethidium and proflavin transporter YP_001757329.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rle:RL3451 putative short-chain dehydrogenase/reductase YP_001757330.1 PFAM: alpha/beta hydrolase fold; KEGG: ret:RHE_PE00174 putative alpha/beta hydrolase protein YP_001757331.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: nar:Saro_2765 transcriptional regulator, LysR family YP_001757333.1 PFAM: protein of unknown function DUF1348; KEGG: pen:PSEEN3413 hypothetical protein YP_001757334.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: bxe:Bxe_B0926 putative oxidoreductase YP_001757335.1 PFAM: Glutathione S-transferase domain; KEGG: nar:Saro_2762 glutathione S-transferase-like YP_001757336.1 PFAM: isochorismatase hydrolase; KEGG: pap:PSPA7_4176 probable hydrolase YP_001757337.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rle:RL0307 putative LysR family transcriptional regulator YP_001757338.1 PFAM: Pirin domain protein; KEGG: rle:pRL110470 hypothetical protein YP_001757339.1 PFAM: Ferritin Dps family protein; KEGG: dra:DR_B0092 DNA-binding stress response protein, Dps family YP_001757341.1 PFAM: cytochrome B561; KEGG: nha:Nham_3894 cytochrome b561 YP_001757342.1 PFAM: protein of unknown function DUF125 transmembrane; KEGG: rpd:RPD_1040 protein of unknown function DUF125, transmembrane YP_001757343.1 KEGG: bbt:BBta_7126 hypothetical protein YP_001757344.1 KEGG: bbt:BBta_7127 hypothetical protein YP_001757345.1 KEGG: mex:Mext_4047 hypothetical protein YP_001757346.1 KEGG: bbt:BBta_0284 putative exported protein of unknown function YP_001757347.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bja:blr6986 putative adenylate cyclase 3 YP_001757348.1 KEGG: bja:bll6110 hypothetical protein YP_001757349.1 KEGG: oan:Oant_1708 hypothetical protein YP_001757351.1 PFAM: protein of unknown function DUF302; KEGG: mlo:mll1327 hypothetical protein YP_001757352.1 KEGG: mlo:mll1329 hypothetical protein YP_001757353.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mlo:mlr1331 probable transcriptional regulator YP_001757354.1 PFAM: FAD dependent oxidoreductase; KEGG: swi:Swit_1188 monooxygenase, FAD-binding YP_001757355.1 KEGG: swi:Swit_1187 methyltransferase type 12 YP_001757356.1 PFAM: chalcone and stilbene synthase domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: scl:sce2182 naringenin-chalcone synthase YP_001757357.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rsh:Rsph17029_1870 drug resistance transporter, EmrB/QacA subfamily YP_001757358.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rme:Rmet_5322 periplasmic sensor signal transduction histidine kinase YP_001757359.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: rme:Rmet_5323 two component transcriptional regulator, LuxR family YP_001757360.1 KEGG: rle:RL2912 hypothetical protein YP_001757361.1 KEGG: hma:rrnB0033 tautomerase YP_001757362.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: reh:H16_B1790 short-chain dehydrogenase of various substrates pecificities YP_001757363.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: rle:RL4053 putative AraC family transcriptional regulator YP_001757364.1 KEGG: dol:Dole_3165 alpha/beta hydrolase fold YP_001757365.1 PFAM: Na+/solute symporter; KEGG: psp:PSPPH_3436 probable sodium/solute symporter YP_001757366.1 SMART: helix-turn-helix- domain containing protein AraC type; KEGG: rpc:RPC_0847 transcriptional regulator, AraC family YP_001757367.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; cyclase/dehydrase; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; carbon monoxide dehydrogenase subunit G; KEGG: rpc:RPC_0848 carbon-monoxide dehydrogenase YP_001757368.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: bja:blr3534 putative carbon monoxide dehydrogenase medium chain YP_001757369.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: acr:Acry_0670 (2Fe-2S)-binding domain protein YP_001757370.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bja:blr3536 putative 4-chlorobenzoate--CoA ligase YP_001757371.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: acr:Acry_0672 enoyl-CoA hydratase/isomerase YP_001757372.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bxe:Bxe_A2078 major facilitator superfamily (MFS) metabolite/H+ symporter YP_001757373.1 PFAM: conserved hypothetical protein; KEGG: rru:Rru_A2729 hypothetical protein YP_001757374.1 TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; KEGG: dsh:Dshi_3714 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_001757375.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: reh:H16_A1704 transcriptional regulator, LysR-family YP_001757376.1 TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; KEGG: rpc:RPC_0843 carboxylyase-related protein YP_001757377.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: bja:blr0367 putative glucose dehydrogenase (acceptor) YP_001757378.1 PFAM: alpha/beta hydrolase fold; KEGG: rpa:RPA0675 possible hydrolase (alpha/beta hydrolase superfamily) YP_001757379.1 PFAM: protein of unknown function DUF849; KEGG: sme:SMb20275 hypothetical protein YP_001757380.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: sme:SMb20276 putative transcriptional regulator protein YP_001757381.1 PFAM: aminotransferase class-III; KEGG: mes:Meso_0176 aminotransferase class-III YP_001757382.1 PFAM: extracellular solute-binding protein family 3; KEGG: bbr:BB0329 probable extracellular solute-binding protein YP_001757383.1 PFAM: Integrase catalytic region; KEGG: ret:RHE_PA00091 probable insertion sequence transposase protein YP_001757384.1 PFAM: transposase IS3/IS911 family protein; KEGG: ypn:YPN_3423 helix-turn-helix, fis-type YP_001757385.1 KEGG: asa:ASA_4263 predicted kinase YP_001757386.1 KEGG: mav:MAV_4187 hypothetical protein YP_001757388.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_4518 LysR substrate-binding YP_001757389.1 PFAM: extracellular solute-binding protein family 5; KEGG: bja:blr3931 probable substrate-binding protein YP_001757390.1 PFAM: type IV pilus assembly PilZ; KEGG: mex:Mext_4321 type IV pilus assembly PilZ YP_001757391.1 PFAM: porin; KEGG: mex:Mext_3186 porin YP_001757392.1 PFAM: Glutathione S-transferase domain; KEGG: rpc:RPC_2712 glutathione S-transferase-like YP_001757393.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gdi:GDI2776 putative transcriptional regulator, LysR family YP_001757394.1 KEGG: rpd:RPD_3655 hypothetical protein YP_001757395.1 KEGG: nha:Nham_2087 hypothetical protein YP_001757396.1 PFAM: Integrase catalytic region; KEGG: rpe:RPE_2430 integrase, catalytic region YP_001757397.1 KEGG: nha:Nham_2089 hypothetical protein YP_001757398.1 KEGG: rpb:RPB_2536 hypothetical protein YP_001757399.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: rpa:RPA0105 transcriptional regulator, GntR family with aminotransferase domain YP_001757400.1 PFAM: protein of unknown function DUF81; KEGG: rpb:RPB_0136 protein of unknown function DUF81 YP_001757401.1 PFAM: Aldehyde Dehydrogenase; KEGG: rpb:RPB_0137 betaine-aldehyde dehydrogenase YP_001757402.1 PFAM: protein of unknown function DUF1486; KEGG: rpb:RPB_0138 hypothetical protein YP_001757403.1 PFAM: FAD dependent oxidoreductase; KEGG: rpa:RPA0113 putative oxidoreductase YP_001757404.1 KEGG: rpb:RPB_0128 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_001757405.1 KEGG: rpa:RPA0099 putative oligopeptide ABC transporter (ATP-binding protein); TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_001757406.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA0100 putative ABC transporter permease protein YP_001757407.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rpa:RPA0101 putative dipeptide transport system permease protein 1 YP_001757408.1 PFAM: extracellular solute-binding protein family 5; KEGG: rpa:RPA0102 putative ABC transporter oligopeptide-binding protein YP_001757409.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: rpb:RPB_0133 cobalamin synthesis protein, P47K YP_001757410.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: rpb:RPB_0134 amidohydrolase-like YP_001757411.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bvi:Bcep1808_6280 transcriptional regulator, LysR family YP_001757412.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: bpt:Bpet0242 probable dehydrogenase YP_001757413.1 PFAM: alpha/beta hydrolase fold; KEGG: bja:blr8188 putative dehalogenase YP_001757414.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bja:blr8189 hypothetical protein YP_001757415.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_1682 ErfK/YbiS/YcfS/YnhG family protein YP_001757416.1 PFAM: peptidase S15; peptidase S9 prolyl oligopeptidase active site domain protein; dienelactone hydrolase; KEGG: mex:Mext_0301 peptidase S9 prolyl oligopeptidase active site domain protein YP_001757418.1 PFAM: pentapeptide repeat protein; KEGG: bja:blr6202 hypothetical protein YP_001757419.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: rpe:RPE_4360 transcriptional regulator, Crp/Fnr family YP_001757420.1 KEGG: azc:AZC_3892 cyanuric acid amidohydrolase; TIGRFAM: ring-opening amidohydrolase; PFAM: Amidohydrolase ring-opening AtzD/TrzD YP_001757421.1 PFAM: regulatory protein ArsR; KEGG: mex:Mext_2872 conserved hypothetical protein; putative transcriptional regulatory protein YP_001757422.1 KEGG: mex:Mext_2871 hypothetical protein YP_001757423.1 PFAM: Saccharopine dehydrogenase; KEGG: mex:Mext_4536 saccharopine dehydrogenase YP_001757424.1 PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: scl:sce0600 putative hydroxylase YP_001757426.1 KEGG: nwi:Nwi_0473 hypothetical protein YP_001757427.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; MHYT domain protein; PAS fold-4 domain protein; KEGG: bja:bll5864 hypothetical protein YP_001757428.1 KEGG: rpa:RPA3317 hypothetical protein YP_001757429.1 PFAM: cyclic nucleotide-binding; KEGG: mex:Mext_2024 cyclic nucleotide-binding YP_001757430.1 KEGG: rpa:RPA2756 hypothetical protein YP_001757431.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: rle:RL4275 putative Acr/RND family efflux transmembrane transporter YP_001757432.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: rle:RL4274 putative HlyD family transmembrane efflux protein YP_001757433.1 KEGG: mex:Mext_2857 hypothetical protein YP_001757434.1 KEGG: dac:Daci_2531 hypothetical protein YP_001757435.1 PFAM: FAD linked oxidase domain protein; KEGG: sen:SACE_6092 FAD linked oxidase-like YP_001757436.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: syc:syc1383_d hypothetical protein YP_001757437.1 PFAM: response regulator receiver; KEGG: eba:ebA6051 putative sensory transduction histidine kinase of highly complex domain structure YP_001757438.1 KEGG: mex:Mext_1371 hypothetical protein YP_001757439.1 KEGG: mex:Mext_1370 hypothetical protein YP_001757440.1 PFAM: glycoside hydrolase family 8; KEGG: mex:Mext_1369 cellulase YP_001757441.1 KEGG: mex:Mext_1368 hypothetical protein YP_001757442.1 KEGG: mex:Mext_1367 cellulose synthase catalytic subunit (UDP-forming); TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: glycosyl transferase family 2 YP_001757443.1 KEGG: mex:Mext_1366 hypothetical protein YP_001757444.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mes:Meso_0596 two component transcriptional regulator, LuxR family YP_001757445.1 KEGG: mex:Mext_1782 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001757446.1 PFAM: type IV pilus assembly PilZ; KEGG: azc:AZC_3349 methyl-accepting chemotaxis sensory transducer YP_001757447.1 KEGG: bja:bll6650 hypothetical protein YP_001757448.1 KEGG: pna:Pnap_2696 antibiotic biosynthesis monooxygenase YP_001757449.1 KEGG: mex:Mext_1696 conserved hypothetical protein; putative signal peptide YP_001757450.1 TIGRFAM: glutamine synthetase, type III; PFAM: glutamine synthetase catalytic region; KEGG: mex:Mext_1659 glutamine synthetase, type III YP_001757451.1 PFAM: dihydroorotate dehydrogenase; ferredoxin-dependent glutamate synthase; KEGG: mex:Mext_1658 ferredoxin-dependent glutamate synthase YP_001757452.1 PFAM: glutamate synthase alpha subunit domain protein; KEGG: mex:Mext_1657 glutamate synthase alpha subunit domain protein YP_001757453.1 PFAM: glutamine amidotransferase class-II; KEGG: mex:Mext_1656 glutamine amidotransferase class-II YP_001757454.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: mex:Mext_2242 helix-turn-helix domain protein YP_001757455.1 PFAM: response regulator receiver; KEGG: bja:blr2342 chemotaxis two-component response regulator YP_001757456.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: rpe:RPE_4677 anti-sigma-factor antagonist YP_001757457.1 PFAM: chemotaxis sensory transducer; KEGG: bbt:BBta_2149 hypothetical protein YP_001757458.1 PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: rpa:RPA0142 multidomain chemotaxis histidine kinase CheA1 (Hpt, CheA, & CheW domains) YP_001757459.1 PFAM: CheW domain protein; KEGG: bbt:BBta_6736 chemotaxis protein CheW YP_001757460.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpe:RPE_4673 methyl-accepting chemotaxis sensory transducer YP_001757461.1 PFAM: CheW domain protein; KEGG: bbt:BBta_6732 chemotaxis protein CheW YP_001757462.1 PFAM: MCP methyltransferase CheR-type; KEGG: rpe:RPE_4670 MCP methyltransferase, CheR-type YP_001757463.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: rpe:RPE_4669 response regulator receiver modulated CheB methylesterase YP_001757464.1 PFAM: FAD dependent oxidoreductase; KEGG: xau:Xaut_2304 D-amino-acid dehydrogenase YP_001757465.1 KEGG: gdi:GDI2421 putative alanine racemase, catabolic; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein YP_001757466.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: bcs:BCAN_B0941 leucine-responsive regulatory protein YP_001757467.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: azc:AZC_1945 cytosine deaminase and related metal-dependent hydrolase YP_001757468.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bbt:BBta_5126 putative transcriptional regulatory protein, LysR-family YP_001757469.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase; 6-phosphogluconate dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: sit:TM1040_0514 6-phosphogluconate dehydrogenase, NAD-binding YP_001757470.1 PFAM: Aldehyde Dehydrogenase; KEGG: sit:TM1040_0515 aldehyde dehydrogenase (NAD+) YP_001757471.1 KEGG: rru:Rru_A1351 hypothetical protein YP_001757472.1 KEGG: mms:mma_3336 hippurate hydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_001757473.1 TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; KEGG: ppu:PP_3668 catalase/peroxidase HPI YP_001757475.1 KEGG: mex:Mext_1545 hypothetical protein YP_001757476.1 PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: azc:AZC_1108 transcriptional regulator YP_001757477.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: azc:AZC_1107 major facilitator family transporter YP_001757478.1 PFAM: amidohydrolase 2; KEGG: rso:RS05190 probable hydrolase transmembrane protein YP_001757479.1 PFAM: major facilitator superfamily MFS_1; KEGG: acb:A1S_1810 putative tartrate transporter YP_001757480.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_1167 ABC transporter related YP_001757481.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_1168 binding-protein-dependent transport systems inner membrane component YP_001757482.1 KEGG: mex:Mext_1169 ABC transporter substrate-binding protein YP_001757483.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_1170 acyl-CoA dehydrogenase domain protein YP_001757484.1 PFAM: Luciferase-like monooxygenase; KEGG: mex:Mext_1171 alkanesulfonate monooxygenase YP_001757485.1 TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; KEGG: mex:Mext_1172 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein YP_001757486.1 PFAM: Cupin domain protein; Cupin 2 conserved barrel domain protein; KEGG: mex:Mext_1173 cupin 2 conserved barrel domain protein YP_001757487.1 KEGG: mex:Mext_3116 Nrd protein YP_001757488.1 KEGG: rsq:Rsph17025_3141 hypothetical protein YP_001757489.1 PFAM: response regulator receiver; KEGG: mex:Mext_0773 response regulator receiver YP_001757490.1 SMART: metal-dependent phosphohydrolase HD region; KEGG: ava:Ava_4162 hypothetical protein YP_001757491.1 KEGG: mxa:MXAN_0959 nuclease SbcCD, C subunit YP_001757492.1 PFAM: protein of unknown function DUF344; KEGG: rle:pRL100445 hypothetical protein YP_001757493.1 KEGG: mex:Mext_4797 hypothetical protein YP_001757494.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: nfa:nfa20960 putative transcriptional regulator YP_001757495.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_2834 ROSMUCR transcriptional regulator YP_001757496.1 KEGG: ade:Adeh_0726 hypothetical protein YP_001757497.1 KEGG: mex:Mext_4587 hypothetical protein YP_001757498.1 PFAM: Pirin domain protein; KEGG: mex:Mext_0185 pirin domain protein YP_001757499.1 PFAM: aldo/keto reductase; KEGG: mex:Mext_3852 aldo/keto reductase YP_001757500.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: azc:AZC_1357 membrane fusion protein YP_001757501.1 PFAM: protein of unknown function DUF1656; KEGG: reh:H16_B1464 hypothetical protein YP_001757502.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: gox:GOX0647 hypothetical protein YP_001757503.1 TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: azc:AZC_1353 cytochrome bd ubiquinol oxidase subunit II YP_001757504.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: azc:AZC_1354 cytochrome BD2 subunit I YP_001757505.1 malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate YP_001757506.1 KEGG: bja:bll0285 hypothetical protein YP_001757507.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: azc:AZC_1355 pyruvate dehydrogenase YP_001757508.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle YP_001757509.1 KEGG: azc:AZC_1188 CoA transferase YP_001757510.1 PFAM: Citrate synthase; KEGG: mlo:mlr3843 citrate synthase II YP_001757511.1 PFAM: class II aldolase/adducin family protein; KEGG: pol:Bpro_4082 hypothetical protein YP_001757512.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_4083 transcriptional regulator, LysR family YP_001757513.1 PFAM: oxidoreductase domain protein; SAF domain protein; KEGG: pnu:Pnuc_1550 SAF domain YP_001757514.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mex:Mext_4074 helix-turn-helix-domain containing protein AraC type YP_001757515.1 KEGG: rha:RHA1_ro05486 hypothetical protein YP_001757516.1 KEGG: mex:Mext_4072 secretion protein HlyD family protein YP_001757517.1 PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; KEGG: mex:Mext_4071 ABC transporter related YP_001757518.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: ccr:CC_0713 transcriptional regulator, AraC family YP_001757519.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: sma:SAV2297 sugar transporter YP_001757520.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rpe:RPE_1828 GCN5-related N-acetyltransferase YP_001757521.1 PFAM: alpha/beta hydrolase fold; KEGG: pfl:PFL_4903 hydrolase, alpha/beta hydrolase fold family, putative YP_001757523.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_2834 ROSMUCR transcriptional regulator YP_001757525.1 KEGG: mex:Mext_4322 hypothetical protein YP_001757526.1 KEGG: bra:BRADO4431 hypothetical protein YP_001757528.1 KEGG: ade:Adeh_0673 signal recognition particle-docking protein FtsY YP_001757530.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr8416 ABC transporter, permease protein YP_001757531.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mlo:mlr8415 ABC transporter ATP-binding subunit YP_001757532.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb21145 putative choline uptake ABC transporter permease protein YP_001757533.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bov:BOV_0216 putative ABC transporter, periplasmic substrate-binding protein YP_001757535.1 PFAM: protein of unknown function UPF0061; KEGG: mex:Mext_4863 protein of unknown function UPF0061 YP_001757536.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mex:Mext_3626 short-chain dehydrogenase/reductase SDR YP_001757537.1 KEGG: mex:Mext_2196 hypothetical protein YP_001757538.1 KEGG: bja:blr0521 hypothetical protein YP_001757539.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_4463 ROSMUCR transcriptional regulator YP_001757541.1 KEGG: mex:Mext_3029 hypothetical protein YP_001757542.1 PFAM: CDP-diacylglycerol pyrophosphatase; KEGG: cvi:CV_4315 CDP-diacylglycerol pyrophosphatase YP_001757543.1 KEGG: mex:Mext_1750 hypothetical protein YP_001757544.1 KEGG: mex:Mext_4706 hypothetical protein YP_001757545.1 KEGG: mex:Mext_1324 hypothetical protein YP_001757547.1 KEGG: mex:Mext_2633 hypothetical protein YP_001757550.1 KEGG: mex:Mext_1866 hypothetical protein YP_001757551.1 KEGG: mex:Mext_4580 hypothetical protein YP_001757552.1 KEGG: mex:Mext_4153 hypothetical protein YP_001757553.1 KEGG: mex:Mext_0394 hypothetical protein YP_001757554.1 PFAM: Protein of unknown function YqcI/YcgG; KEGG: mex:Mext_2464 protein of unknown function YqcI/YcgG YP_001757555.1 PFAM: methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: mex:Mext_2463 methyltransferase small YP_001757556.1 KEGG: mex:Mext_2462 hypothetical protein YP_001757558.1 KEGG: nfa:nfa38100 hypothetical protein YP_001757559.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: ret:RHE_PE00431 probable oxidoreductase protein, short-chain-dehydrogenase (SDR) superfamily YP_001757560.1 PFAM: protein of unknown function DUF606; KEGG: mex:Mext_3609 protein of unknown function DUF606 YP_001757561.1 PFAM: protein of unknown function DUF606; KEGG: mex:Mext_3609 protein of unknown function DUF606 YP_001757562.1 TIGRFAM: oligopeptide transporters, OPT superfamily; oligopeptide transporter, OPT family; PFAM: Oligopeptide transporter OPT superfamily protein; KEGG: mex:Mext_2466 oligopeptide transporter, OPT family YP_001757563.1 KEGG: mex:Mext_4155 hypothetical protein YP_001757565.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bpt:Bpet2876 putative amino-acid ABC transporter ATP-binding protein YP_001757566.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll3859 amino acid ABC transporter (permease) YP_001757567.1 PFAM: extracellular solute-binding protein family 3; KEGG: sme:SMc03891 putative amino acid-binding periplasmic ABC transporter protein YP_001757568.1 PFAM: dihydrodipicolinate synthetase; KEGG: xau:Xaut_1021 dihydrodipicolinate synthetase YP_001757569.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; DegT/DnrJ/EryC1/StrS aminotransferase; aminotransferase class I and II; KEGG: mlo:mlr5693 aspartate aminotransferase YP_001757570.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: rpd:RPD_4378 cytochrome bd ubiquinol oxidase, subunit I YP_001757571.1 TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: swi:Swit_0417 cytochrome d ubiquinol oxidase, subunit II YP_001757572.1 KEGG: nar:Saro_1027 hypothetical protein YP_001757573.1 KEGG: rle:pRL90275 putative transcriptional regulator YP_001757574.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bja:blr4427 transcriptional regulatory protein YP_001757575.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_2152 LysR substrate-binding YP_001757576.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mex:Mext_2153 glyoxalase/bleomycin resistance protein/dioxygenase YP_001757577.1 PFAM: phospholipase/Carboxylesterase; KEGG: mex:Mext_2154 phospholipase/carboxylesterase YP_001757578.1 PFAM: DoxX family protein; KEGG: rme:Rmet_4295 DoxX YP_001757579.1 PFAM: alpha/beta hydrolase fold; KEGG: gur:Gura_3450 alpha/beta hydrolase fold YP_001757580.1 PFAM: oxidoreductase domain protein; KEGG: scl:sce2390 putative dehydrogenases YP_001757582.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_0312 mutator MutT protein YP_001757583.1 PFAM: protein of unknown function DUF541; KEGG: mex:Mext_0313 protein of unknown function DUF541 YP_001757584.1 KEGG: mex:Mext_0314 arginine biosynthesis bifunctional protein ArgJ; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ YP_001757585.1 KEGG: mex:Mext_0315 sensor histidine kinase with PAS/PAC and response regulator receiver domains YP_001757586.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_4691 chemotaxis sensory transducer YP_001757587.1 KEGG: mex:Mext_3768 putative transcriptional regulator, TetR family YP_001757588.1 KEGG: mex:Mext_3769 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent YP_001757589.1 PFAM: Protein of unknown function DUF1790; KEGG: mex:Mext_3770 protein of unknown function DUF1790 YP_001757590.1 PFAM: protein of unknown function DUF526; KEGG: mex:Mext_3771 protein of unknown function DUF526 YP_001757592.1 PFAM: PhoH family protein; KEGG: mex:Mext_0323 PhoH family protein YP_001757593.1 PFAM: UvrD/REP helicase; KEGG: mex:Mext_0322 UvrD/REP helicase YP_001757594.1 KEGG: mex:Mext_0320 hypothetical protein YP_001757595.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: mex:Mext_0431 oligopeptidase B YP_001757596.1 PFAM: porin; KEGG: mex:Mext_3960 porin YP_001757597.1 KEGG: mex:Mext_0433 hypothetical protein YP_001757598.1 KEGG: mex:Mext_0434 hypothetical protein YP_001757599.1 PFAM: Fe-S metabolism associated SufE; KEGG: mex:Mext_0435 Fe-S metabolism associated SufE YP_001757600.1 KEGG: mex:Mext_0436 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: histidine kinase dimerisation/phosphoacceptor; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAC repeat-containing protein YP_001757601.1 KEGG: bxe:Bxe_A0444 hypothetical protein YP_001757602.1 KEGG: dge:Dgeo_2872 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase YP_001757603.1 PFAM: protein of unknown function DUF264; KEGG: mex:Mext_1434 protein of unknown function DUF264 YP_001757604.1 KEGG: jan:Jann_3322 hypothetical protein YP_001757605.1 TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein; KEGG: mex:Mext_1433 phage portal protein, HK97 family YP_001757606.1 TIGRFAM: phage prohead protease, HK97 family; PFAM: peptidase U35 phage prohead HK97; KEGG: mex:Mext_1432 phage prohead protease, HK97 family YP_001757607.1 TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97; KEGG: mex:Mext_1431 phage major capsid protein, HK97 family YP_001757608.1 binds DNA in a non-sequence-specific manner and is abundant during stationary phase; forms a DNA-protein crystal that protects DNA from damage; required for normal starvation response and long-term stationary viability; forms a homododecameric complex and sequesters iron which provides protection against oxidative damage YP_001757609.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: mex:Mext_1430 peptidase S1 and S6 chymotrypsin/Hap YP_001757610.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: mex:Mext_1429 peptidase S1 and S6 chymotrypsin/Hap YP_001757611.1 KEGG: mex:Mext_1428 phiE125 gp8 family protein YP_001757612.1 TIGRFAM: phage head-tail adaptor; KEGG: mex:Mext_1427 phage head-tail adaptor YP_001757613.1 KEGG: mex:Mext_1426 hypothetical protein YP_001757614.1 TIGRFAM: phage major tail protein, TP901-1 family; KEGG: mex:Mext_1425 phage major tail protein, TP901-1 family YP_001757615.1 KEGG: mex:Mext_1424 gene transfer agent (GTA) orfg10 YP_001757616.1 KEGG: mex:Mext_1422 gene transfer agent (GTA) orfg11 YP_001757617.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: bmu:Bmul_4566 taurine dioxygenase YP_001757618.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_1421 hypothetical protein YP_001757619.1 PFAM: Beta tubulin, autoregulation binding site; KEGG: mex:Mext_1420 hypothetical protein YP_001757620.1 TIGRFAM: phage cell wall peptidase, NlpC/P60 family; PFAM: NLP/P60 protein; KEGG: mex:Mext_1419 phage cell wall peptidase, NlpC/P60 family YP_001757621.1 KEGG: mex:Mext_1418 gene transfer agent (GTA) orfg15, like protein YP_001757622.1 KEGG: mex:Mext_1417 hypothetical protein YP_001757623.1 KEGG: nar:Saro_3112 lipolytic enzyme, G-D-S-L YP_001757624.1 KEGG: bam:Bamb_5886 hypothetical protein YP_001757625.1 KEGG: mex:Mext_4382 hypothetical protein YP_001757628.1 KEGG: mex:Mext_1412 hypothetical protein YP_001757629.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_1411 response regulator receiver YP_001757630.1 PFAM: protein of unknown function DUF453; KEGG: acr:Acry_1266 protein of unknown function DUF453 YP_001757631.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mex:Mext_1409 ATP-binding region ATPase domain protein YP_001757632.1 TIGRFAM: cytochrome c-type biogenesis protein CcmI; KEGG: mex:Mext_1408 cytochrome c-type biogenesis protein CcmI YP_001757633.1 PFAM: CcmE/CycJ protein; KEGG: mex:Mext_1407 CcmE/CycJ protein YP_001757634.1 TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: mex:Mext_1406 cytochrome c assembly protein YP_001757635.1 PFAM: cytochrome C biogenesis protein; KEGG: mex:Mext_1405 cytochrome c biogenesis protein YP_001757636.1 PFAM: Glutathione S-transferase domain; KEGG: mex:Mext_3775 putative glutathione-S-transferase protein YP_001757637.1 PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: mex:Mext_4404 NADH dehydrogenase (ubiquinone) 24 kDa subunit YP_001757638.1 PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: mex:Mext_4405 NADH dehydrogenase (quinone) YP_001757639.1 TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mex:Mext_4406 formate dehydrogenase, alpha subunit YP_001757640.1 KEGG: mex:Mext_4407 hypothetical protein YP_001757641.1 KEGG: mex:Mext_2920 3-oxoacid CoA-transferase, B subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase YP_001757642.1 KEGG: mex:Mext_2919 3-oxoacid CoA-transferase, A subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase YP_001757643.1 PFAM: AsmA family protein; KEGG: mex:Mext_2918 AsmA family protein YP_001757644.1 KEGG: mex:Mext_2900 hypothetical protein YP_001757645.1 PFAM: beta-lactamase domain protein; KEGG: mex:Mext_2901 beta-lactamase domain protein YP_001757647.1 PFAM: protein of unknown function DUF1328; KEGG: mex:Mext_2903 protein of unknown function DUF1328 YP_001757648.1 KEGG: mex:Mext_2904 hypothetical protein YP_001757649.1 in Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media YP_001757650.1 KEGG: mex:Mext_2906 hypothetical protein YP_001757651.1 KEGG: mex:Mext_2898 hypothetical protein YP_001757652.1 KEGG: sma:SAV7301 proline-rich protein YP_001757653.1 KEGG: nha:Nham_4181 hypothetical protein YP_001757654.1 PFAM: cyclic nucleotide-binding; KEGG: mex:Mext_2896 cyclic nucleotide-binding YP_001757655.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mex:Mext_2894 glyoxalase/bleomycin resistance protein/dioxygenase YP_001757656.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2893 ErfK/YbiS/YcfS/YnhG family protein YP_001757657.1 KEGG: bbt:BBta_4232 putative exported protein of unknown function YP_001757658.1 PFAM: nuclease (SNase domain protein); KEGG: mex:Mext_0111 nuclease (SNase domain protein) YP_001757659.1 PFAM: protein of unknown function UPF0118; KEGG: mex:Mext_4551 protein of unknown function UPF0118 YP_001757660.1 Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides YP_001757661.1 PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: mex:Mext_4547 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_001757662.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP YP_001757663.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mex:Mext_4164 cold-shock protein DNA-binding YP_001757664.1 KEGG: mex:Mext_4165 hypothetical protein YP_001757665.1 KEGG: mex:Mext_4166 hypothetical protein YP_001757666.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rle:pRL110290 putative acetyltransferase YP_001757667.1 PFAM: ATP-NAD/AcoX kinase; KEGG: mex:Mext_0549 NAD(+) kinase YP_001757668.1 PFAM: CutA1 divalent ion tolerance protein; KEGG: mex:Mext_0548 CutA1 divalent ion tolerance protein YP_001757669.1 KEGG: psb:Psyr_0765 hypothetical protein YP_001757670.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_3434 glycosyl transferase family 2 YP_001757671.1 SMART: phospholipid/glycerol acyltransferase; KEGG: mex:Mext_3435 phospholipid/glycerol acyltransferase YP_001757672.1 TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_3436 phytoene desaturase YP_001757673.1 PFAM: glutamine amidotransferase class-I; KEGG: mex:Mext_3437 glutamine amidotransferase class-I YP_001757675.1 PFAM: Cache type 2 domain protein; KEGG: gur:Gura_3066 cache, type 2 domain protein YP_001757676.1 PFAM: ABC-2 type transporter; KEGG: mex:Mext_3438 ABC-2 type transporter YP_001757677.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_3439 ABC transporter related YP_001757678.1 KEGG: mex:Mext_3440 hypothetical protein YP_001757679.1 TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_3441 phytoene desaturase YP_001757680.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: rpa:RPA1935 possible transcriptional regulator, AraC family YP_001757681.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mex:Mext_3443 tRNA/rRNA methyltransferase (SpoU) YP_001757682.1 PFAM: MaoC domain protein dehydratase; KEGG: mex:Mext_3444 MaoC domain protein dehydratase YP_001757683.1 KEGG: mex:Mext_3445 cation efflux protein YP_001757684.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_3446 metallophosphoesterase YP_001757685.1 KEGG: mex:Mext_2261 hypothetical protein YP_001757686.1 PFAM: homospermidine synthase; KEGG: mex:Mext_2042 homospermidine synthase YP_001757688.1 PFAM: Invasion associated locus B family protein; KEGG: mex:Mext_3054 invasion associated locus B family protein YP_001757689.1 KEGG: mex:Mext_0429 tetratricopeptide TPR_4 protein YP_001757690.1 KEGG: dac:Daci_3321 hypothetical protein YP_001757691.1 KEGG: mex:Mext_0427 flagellar biosynthetic protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein YP_001757692.1 KEGG: mex:Mext_4083 hypothetical protein YP_001757693.1 KEGG: mex:Mext_4084 hypothetical protein YP_001757694.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: mex:Mext_4085 capsule polysaccharide export protein-like protein YP_001757695.1 KEGG: mex:Mext_4086 hypothetical protein YP_001757696.1 PFAM: response regulator receiver; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: mex:Mext_4088 sigma-54 factor interaction domain-containing protein YP_001757697.1 TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: mex:Mext_4089 flagellar motor switch protein FliN YP_001757698.1 binds to and inhibits the function of flagella specific ATPase FliI YP_001757699.1 One of three proteins involved in switching the direction of the flagellar rotation YP_001757700.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod YP_001757701.1 PFAM: protein of unknown function DUF1153; KEGG: mex:Mext_4093 protein of unknown function DUF1153 YP_001757702.1 PFAM: flagellar hook capping protein; KEGG: mex:Mext_4094 flagellar hook capping protein YP_001757703.1 PFAM: flagellar hook-length control protein; KEGG: mex:Mext_4095 flagellar hook-length control protein YP_001757704.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs YP_001757705.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mex:Mext_4097 phosphatidylethanolamine N-methyltransferase YP_001757706.1 PFAM: SNARE associated Golgi protein; KEGG: mex:Mext_4098 SNARE associated Golgi protein YP_001757707.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mex:Mext_4099 ATP-binding region ATPase domain protein YP_001757708.1 KEGG: mex:Mext_4006 biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; SMART: Elongator protein 3/MiaB/NifB YP_001757709.1 PFAM: chemotaxis sensory transducer; KEGG: mex:Mext_1975 chemotaxis sensory transducer YP_001757710.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: mex:Mext_4008 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase YP_001757711.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: mex:Mext_4009 membrane protein involved in aromatic hydrocarbon degradation YP_001757712.1 TIGRFAM: poly(R)-hydroxyalkanoic acid synthase, class I; PFAM: alpha/beta hydrolase fold; Poly-beta-hydroxybutyrate polymerase domain protein; KEGG: mex:Mext_3093 poly(R)-hydroxyalkanoic acid synthase, class I YP_001757713.1 KEGG: mex:Mext_3092 hypothetical protein YP_001757714.1 PFAM: aminotransferase class I and II; KEGG: mex:Mext_3091 aminotransferase class I and II YP_001757715.1 KEGG: mex:Mext_3090 hypothetical protein YP_001757716.1 KEGG: mex:Mext_3089 hypothetical protein YP_001757717.1 KEGG: mex:Mext_0663 putative DNA-binding protein YP_001757718.1 TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: mex:Mext_2982 peptide chain release factor 2 YP_001757719.1 KEGG: azc:AZC_0771 gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_001757720.1 PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; KEGG: azc:AZC_0772 oligopeptide ABC transporter ATP-binding protein YP_001757721.1 KEGG: azc:AZC_0773 oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_001757722.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_0774 ABC transporter permease protein YP_001757723.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: azc:AZC_0775 ABC transporter permease protein YP_001757724.1 PFAM: extracellular solute-binding protein family 5; KEGG: azc:AZC_0777 ABC transporter substrate binding protein YP_001757725.1 PFAM: type IV pilus assembly PilZ; KEGG: mex:Mext_3033 type IV pilus assembly PilZ YP_001757726.1 PFAM: HupE/UreJ protein; KEGG: xau:Xaut_2188 HupE/UreJ protein YP_001757727.1 KEGG: mex:Mext_3402 hypothetical protein YP_001757728.1 PFAM: porin; KEGG: mex:Mext_3186 porin YP_001757729.1 PFAM: porin; KEGG: mex:Mext_3186 porin YP_001757730.1 PFAM: Citrate carrier protein; KEGG: bur:Bcep18194_B0308 citrate carrier protein YP_001757731.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: xau:Xaut_2273 general substrate transporter YP_001757732.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: acr:Acry_2242 transcriptional regulator, GntR family YP_001757733.1 catalyzes the oxidation of tricarballylate to cis-aconitate; FAD-dependent; required for the utilization of tricarballylate as a carbon and energy source by S. enterica YP_001757734.1 TIGRFAM: double-strand break repair protein AddB; KEGG: mex:Mext_4439 double-strand break repair protein AddB YP_001757735.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: rpa:RPA1094 glutaryl-CoA dehydrogenase YP_001757736.1 PFAM: Auxin Efflux Carrier; KEGG: mex:Mext_2979 auxin efflux carrier YP_001757737.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: reh:H16_B2216 methyltransferase YP_001757738.1 KEGG: mex:Mext_2857 hypothetical protein YP_001757739.1 PFAM: aminotransferase class V; Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: mex:Mext_2858 cystathionine gamma-synthase YP_001757740.1 PFAM: TspO/MBR family protein; KEGG: mex:Mext_2859 TspO/MBR family protein YP_001757741.1 KEGG: mjl:Mjls_2610 hypothetical protein YP_001757742.1 KEGG: rpd:RPD_0552 hypothetical protein YP_001757743.1 PFAM: acriflavin resistance protein; KEGG: mex:Mext_3922 acriflavin resistance protein YP_001757744.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_3921 efflux transporter, RND family, MFP subunit YP_001757745.1 KEGG: mex:Mext_3920 hypothetical protein YP_001757746.1 KEGG: mex:Mext_1231 hypothetical protein YP_001757747.1 PFAM: glycosyl transferase family 2; KEGG: mex:Mext_1232 glycosyl transferase family 2 YP_001757748.1 PFAM: glycosyl transferase group 1; KEGG: mex:Mext_1233 glycosyl transferase group 1 YP_001757749.1 PFAM: band 7 protein; KEGG: bja:bll7750 hypothetical protein YP_001757750.1 PFAM: protein of unknown function DUF107; KEGG: rpd:RPD_0863 protein of unknown function DUF107 YP_001757751.1 KEGG: mex:Mext_4533 phosphoenolpyruvate carboxylase YP_001757752.1 KEGG: mex:Mext_4534 hypothetical protein YP_001757753.1 KEGG: mex:Mext_4535 hypothetical protein YP_001757754.1 PFAM: helix-hairpin-helix motif; KEGG: mex:Mext_2496 hypothetical protein YP_001757755.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not YP_001757756.1 KEGG: mex:Mext_3467 hypothetical protein YP_001757757.1 TIGRFAM: polyhydroxyalkanoate synthesis repressor PhaR; PFAM: PHB accumulation regulatory domain protein; PHA accumulation regulator DNA-binding protein; KEGG: mex:Mext_3468 polyhydroxyalkanoate synthesis repressor PhaR YP_001757758.1 KEGG: mex:Mext_3469 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase YP_001757759.1 TIGRFAM: acetoacetyl-CoA reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_3470 acetoacetyl-CoA reductase YP_001757760.1 KEGG: cvi:CV_2078 hypothetical protein YP_001757762.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: rpe:RPE_3536 glycerophosphoryl diester phosphodiesterase YP_001757763.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: rpd:RPD_0304 protein of unknown function DUF6, transmembrane YP_001757764.1 PFAM: protein of unknown function DUF985; KEGG: mex:Mext_4537 protein of unknown function DUF985 YP_001757765.1 PFAM: 3'-5' exonuclease; KEGG: mex:Mext_2497 3'-5' exonuclease YP_001757766.1 KEGG: bbt:BBta_0888 hypothetical protein YP_001757767.1 TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: mex:Mext_2377 glutamine synthetase, type I YP_001757768.1 PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: rpc:RPC_1539 glutamate--ammonia ligase YP_001757770.1 PFAM: nitrogen regulatory protein P-II; KEGG: mex:Mext_2374 nitrogen regulatory protein P-II YP_001757771.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: mex:Mext_2373 carbohydrate kinase, YjeF related protein YP_001757772.1 PFAM: multicopper oxidase type 1; multicopper oxidase type 2; multicopper oxidase type 3; KEGG: mex:Mext_2414 multicopper oxidase type 3 YP_001757773.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer YP_001757774.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates YP_001757775.1 binds and unfolds substrates as part of the ClpXP protease YP_001757776.1 KEGG: mex:Mext_2418 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_001757777.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: pol:Bpro_1006 Asp/Glu racemase YP_001757778.1 KEGG: bra:BRADO5932 conserved hypothetical protein; putative signal peptide YP_001757779.1 PFAM: Phytanoyl-CoA dioxygenase; KEGG: bch:Bcen2424_6285 phytanoyl-CoA dioxygenase YP_001757780.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_1316 alpha/beta hydrolase fold YP_001757781.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_0021 short-chain dehydrogenase/reductase SDR YP_001757782.1 KEGG: mex:Mext_4793 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; Nucleotidyl transferase; Cupin 2 conserved barrel domain protein YP_001757783.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; L-seryl-tRNA selenium transferase; KEGG: azc:AZC_1155 L-seryl-tRNA selenium transferase YP_001757784.1 PFAM: regulatory protein MarR; KEGG: mex:Mext_2174 regulatory protein MarR YP_001757785.1 PFAM: pentapeptide repeat protein; KEGG: mex:Mext_4216 pentapeptide repeat protein YP_001757786.1 TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: mex:Mext_2958 oxidoreductase alpha (molybdopterin) subunit YP_001757787.1 PFAM: metallothionein family 14; KEGG: mex:Mext_2843 metallothionein family 14 YP_001757788.1 PFAM: protein of unknown function DUF77; KEGG: aeh:Mlg_1183 protein of unknown function DUF77 YP_001757789.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: bbt:BBta_6486 putative transcriptional regulatory protein, LysR family YP_001757790.1 catalyzes the formation of 2,5-dioxopentanoate from 5-dehydro-4-deoxy-D-glucarate YP_001757791.1 TIGRFAM: d-galactonate transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bbt:BBta_6485 D-glucarate permease (MFS family) YP_001757792.1 KEGG: bur:Bcep18194_A4275 mandelate racemase/muconate lactonizing enzyme; TIGRFAM: glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing protein YP_001757793.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: bra:BRADO3099 putative amidohydrolase family protein YP_001757794.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bra:BRADO3098 ABC transporter ATP-binding protein (TauB-like) YP_001757795.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bra:BRADO3097 putative ABC transporter permease YP_001757796.1 KEGG: bra:BRADO3096 putative ABC transporter periplasmic substrate-binding protein YP_001757797.1 PFAM: GCN5-related N-acetyltransferase; KEGG: rru:Rru_A2227 GCN5-related N-acetyltransferase YP_001757798.1 KEGG: mex:Mext_3971 hypothetical protein YP_001757799.1 PFAM: band 7 protein; KEGG: mex:Mext_3970 band 7 protein YP_001757800.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_3969 NUDIX hydrolase YP_001757801.1 PFAM: von Willebrand factor type A; Vault protein inter-alpha-trypsin domain protein; SMART: Vault protein inter-alpha-trypsin, metazoa; KEGG: mex:Mext_1400 vault protein inter-alpha-trypsin domain protein YP_001757802.1 TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: mex:Mext_1399 sortase family protein YP_001757803.1 SMART: helix-turn-helix domain protein; KEGG: mex:Mext_1398 helix-turn-helix domain protein YP_001757805.1 KEGG: xau:Xaut_3440 hypothetical protein YP_001757806.1 PFAM: Primase 1; Bifunctional DNA primase/polymerase; KEGG: cth:Cthe_1986 phage / plasmid primase, P4 family YP_001757807.1 TIGRFAM: phage/plasmid primase, P4 family; PFAM: primase P4; KEGG: xau:Xaut_3437 phage/plasmid primase, P4 family YP_001757808.1 KEGG: mex:Mext_1876 hypothetical protein YP_001757810.1 KEGG: pac:PPA2210 hypothetical protein, putative adhesion or S-layer protein YP_001757811.1 KEGG: mex:Mext_1877 hypothetical protein YP_001757812.1 KEGG: ade:Adeh_2705 response regulator receiver YP_001757814.1 KEGG: sal:Sala_3169 tetratricopeptide TPR_2 YP_001757815.1 TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: oan:Oant_0888 phage tail tape measure protein, TP901 family YP_001757816.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_4463 ROSMUCR transcriptional regulator YP_001757817.1 KEGG: mex:Mext_0078 hypothetical protein YP_001757821.1 KEGG: azc:AZC_3253 putative transposase of insertion sequence YP_001757822.1 KEGG: azc:AZC_2122 transposase YP_001757823.1 KEGG: cvi:CV_2828 hypothetical protein YP_001757825.1 KEGG: mex:Mext_1867 hypothetical protein YP_001757826.1 KEGG: hal:VNG1659G Htr1 YP_001757831.1 KEGG: nwi:Nwi_1140 phage integrase YP_001757832.1 KEGG: vha:VIBHAR_00841 integrase YP_001757833.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_1922 metallophosphoesterase YP_001757835.1 KEGG: bbr:BB1832 hypothetical protein YP_001757840.1 PFAM: ParB domain protein nuclease; KEGG: pla:Plav_0315 ParB domain protein nuclease YP_001757841.1 KEGG: bta:782323 hypothetical protein LOC782323 YP_001757846.1 KEGG: sil:SPO3171 hypothetical protein YP_001757847.1 KEGG: nha:Nham_0784 hypothetical protein YP_001757848.1 KEGG: nha:Nham_0785 hypothetical protein YP_001757849.1 KEGG: nha:Nham_0786 hypothetical protein YP_001757851.1 KEGG: bbt:BBta_7127 hypothetical protein YP_001757852.1 KEGG: bra:BRADO0926 hypothetical protein containing two histidine-rich domains; putative signal peptide YP_001757854.1 PFAM: protein of unknown function DUF125 transmembrane; KEGG: rpd:RPD_1040 protein of unknown function DUF125, transmembrane YP_001757855.1 PFAM: cytochrome B561; KEGG: nha:Nham_3894 cytochrome b561 YP_001757857.1 PFAM: Ferritin Dps family protein; KEGG: dra:DR_B0092 DNA-binding stress response protein, Dps family YP_001757858.1 KEGG: mex:Mext_0454 hypothetical protein YP_001757859.1 PFAM: GAF domain protein; KEGG: mex:Mext_3897 PAS sensor protein YP_001757860.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; KEGG: pen:PSEEN2027 sensor histidine kinase/response regulator hybrid YP_001757861.1 KEGG: rpc:RPC_2215 putative transcriptional regulators, CopG/Arc/MetJ DNA-binding domain YP_001757862.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_4107 PAS sensor protein YP_001757863.1 KEGG: scl:sce5100 two-component hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001757864.1 PFAM: response regulator receiver; KEGG: sbl:Sbal_0503 response regulator receiver protein YP_001757865.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: amr:AM1_5057 two-component hybrid histidine kinase sensor and regulator YP_001757866.1 PFAM: protein of unknown function UPF0156; KEGG: rru:Rru_A0700 predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain YP_001757867.1 KEGG: psp:PSPPH_4003 sensory box histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001757868.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: bxe:Bxe_B2486 anti-sigma-factor antagonist (STAS) domain protein YP_001757869.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: aba:Acid345_2415 anti-sigma-factor antagonist YP_001757870.1 PFAM: ATP-binding region ATPase domain protein; KEGG: sus:Acid_0529 putative anti-sigma regulatory factor, serine/threonine protein kinase YP_001757871.1 PFAM: ATP-binding region ATPase domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: afw:Anae109_0802 putative anti-sigma regulatory factor, serine/threonine protein kinase YP_001757872.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_4051 PAS sensor protein YP_001757873.1 KEGG: mex:Mext_4051 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; GAF domain protein YP_001757874.1 PFAM: histidine kinase HAMP region domain protein; HWE histidine kinase; KEGG: ret:RHE_PF00079 putative two-component sensor histidine kinase protein YP_001757875.1 PFAM: regulatory protein TetR; KEGG: gbe:GbCGDNIH1_1777 transcriptional regulator, TetR family YP_001757876.1 PFAM: protein of unknown function DUF892; KEGG: mex:Mext_3624 hypothetical protein YP_001757877.1 KEGG: mex:Mext_1186 conserved hypothetical protein; putative signal peptide YP_001757878.1 KEGG: mex:Mext_3483 hypothetical protein YP_001757879.1 TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; KEGG: gdi:GDI3796 putative outer membrane protein YP_001757880.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: gbe:GbCGDNIH1_1723 multidrug resistance protein B YP_001757881.1 PFAM: secretion protein HlyD family protein; KEGG: gbe:GbCGDNIH1_1724 multidrug resistance protein A YP_001757882.1 PFAM: regulatory protein TetR; KEGG: jan:Jann_2416 transcriptional regulator, TetR family YP_001757883.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bbt:BBta_7111 putative enoyl-CoA hydratase YP_001757884.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: azc:AZC_2053 putative ring-cleavage extradiol dioxygenase YP_001757885.1 PFAM: YceI family protein; KEGG: gdi:GDI1481 hypothetical protein YP_001757886.1 PFAM: cytochrome B561; KEGG: gdi:GDI1482 putative cytochrome b561 YP_001757887.1 PFAM: YceI family protein; KEGG: rpc:RPC_2323 YceI YP_001757888.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: noc:Noc_2410 transcriptional regulatory protein, LysR family YP_001757889.1 PFAM: 3-beta hydroxysteroid dehydrogenase/isomerase; NmrA family protein; KEGG: rpa:RPA2701 hypothetical protein YP_001757890.1 PFAM: helix-turn-helix HxlR type; KEGG: rpb:RPB_2619 putative transcriptional regulator YP_001757891.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: xau:Xaut_2667 40-residue YVTN family beta-propeller repeat protein YP_001757892.1 PFAM: protein of unknown function DUF305; KEGG: xau:Xaut_2666 protein of unknown function DUF305 YP_001757893.1 PFAM: Secreted repeat of unknown function; KEGG: rpb:RPB_1064 secreted repeat protein YP_001757894.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: xau:Xaut_2662 RNA polymerase, sigma-24 subunit, ECF subfamily YP_001757895.1 KEGG: xau:Xaut_2661 putative transmembrane anti-sigma factor YP_001757896.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rpc:RPC_1679 transcriptional regulator, LysR family YP_001757898.1 PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: mbb:BCG_1796 putative sulfite oxidase YP_001757899.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: pst:PSPTO_4611 hypothetical protein YP_001757900.1 KEGG: swi:Swit_0948 hypothetical protein YP_001757901.1 PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: swi:Swit_0949 oxidoreductase, molybdopterin binding YP_001757902.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: mex:Mext_0606 adenylyl cyclase class-3/4/guanylyl cyclase YP_001757903.1 PFAM: conserved hypothetical protein; KEGG: oan:Oant_0027 conserved hypothetical protein 698 YP_001757904.1 PFAM: Phosphoglycerate mutase; KEGG: bbt:BBta_0198 phosphoglyceromutase YP_001757905.1 PFAM: periplasmic binding protein; KEGG: mex:Mext_2668 periplasmic binding protein YP_001757906.1 KEGG: rde:RD1_0735 hypothetical protein YP_001757908.1 KEGG: mex:Mext_0048 hypothetical protein YP_001757909.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_4367 amine oxidase YP_001757910.1 KEGG: bra:BRADO1990 hypothetical protein YP_001757911.1 KEGG: hne:HNE_0493 hypothetical protein YP_001757913.1 PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: mra:MRA_1768C putative sulfite oxidase YP_001757914.1 TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mex:Mext_1687 zinc-binding alcohol dehydrogenase family protein YP_001757915.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: rha:RHA1_ro02434 hypothetical protein YP_001757916.1 PFAM: alpha/beta hydrolase fold; KEGG: gbe:GbCGDNIH1_1476 hydrolase YP_001757917.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: dac:Daci_3889 NADH:flavin oxidoreductase/NADH oxidase YP_001757918.1 PFAM: protein of unknown function DUF1486; KEGG: art:Arth_0931 protein of unknown function DUF1486 YP_001757919.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: rsh:Rsph17029_1228 intracellular protease, PfpI family YP_001757920.1 PFAM: aldo/keto reductase; KEGG: ava:Ava_C0138 aldo/keto reductase YP_001757921.1 PFAM: integrase family protein; KEGG: eli:ELI_04185 phage integrase family protein YP_001757922.1 PFAM: beta-lactamase; KEGG: csa:Csal_0193 beta-lactamase YP_001757923.1 KEGG: smd:Smed_3441 translation initiation factor IF-2 YP_001757925.1 KEGG: mgm:Mmc1_2915 hypothetical protein YP_001757929.1 KEGG: xau:Xaut_3664 hypothetical protein YP_001757930.1 KEGG: xau:Xaut_3664 hypothetical protein YP_001757931.1 KEGG: btr:Btr_0991 hypothetical protein YP_001757935.1 KEGG: nha:Nham_3781 ATPase associated with various cellular activities, AAA_5 YP_001757948.1 PFAM: protein of unknown function DUF849; KEGG: mex:Mext_1354 protein of unknown function DUF849 YP_001757949.1 PFAM: dehydroquinase class II; KEGG: rsp:RSP_3376 3-dehydroquinate dehydratase YP_001757950.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate YP_001757951.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis YP_001757952.1 PFAM: Amidase; KEGG: bpt:Bpet3846 probable amidase YP_001757953.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: mex:Mext_4864 acetolactate synthase, large subunit, biosynthetic type YP_001757954.1 TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; KEGG: mex:Mext_4866 acetolactate synthase, small subunit YP_001757955.1 PFAM: Glutathione S-transferase domain; KEGG: mex:Mext_4867 glutathione S-transferase domain YP_001757956.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_0284 regulatory protein TetR YP_001757957.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis YP_001757958.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: mex:Mext_0286 pyridoxamine 5'-phosphate oxidase-related FMN-binding YP_001757959.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_3161 methyl-accepting chemotaxis sensory transducer YP_001757960.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: aav:Aave_2207 trans-aconitate 2-methyltransferase YP_001757961.1 TIGRFAM: haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bam:Bamb_3446 haloacid dehalogenase, type II YP_001757962.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_001757963.1 PFAM: helix-hairpin-helix motif; SMART: HhH-GPD family protein; KEGG: mex:Mext_2718 HhH-GPD family protein YP_001757964.1 PFAM: transcription activator effector binding; KEGG: mex:Mext_2719 transcription activator effector binding YP_001757965.1 PFAM: diaminopimelate epimerase; KEGG: mex:Mext_2720 diaminopimelate epimerase YP_001757966.1 KEGG: mex:Mext_2721 MiaB-like tRNA modifying enzyme; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB YP_001757967.1 PFAM: pseudouridine synthase; KEGG: mex:Mext_2722 pseudouridine synthase YP_001757968.1 KEGG: mex:Mext_2723 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase YP_001757969.1 TIGRFAM: intracellular septation protein A; PFAM: Intracellular septation protein A; KEGG: mex:Mext_2724 intracellular septation protein A YP_001757970.1 TIGRFAM: periplasmic protein thiol--disulphide oxidoreductase DsbE; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; Thioredoxin domain; KEGG: mex:Mext_2614 periplasmic protein thiol--disulphide oxidoreductase DsbE YP_001757971.1 TIGRFAM: heme exporter protein CcmD; PFAM: Heme exporter protein D (CcmD) YP_001757972.1 TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: mex:Mext_2612 heme exporter protein CcmC YP_001757973.1 KEGG: mex:Mext_0008 hypothetical protein YP_001757975.1 PFAM: methyltransferase small; KEGG: mex:Mext_3106 methyltransferase small YP_001757976.1 KEGG: mex:Mext_3107 hypothetical protein YP_001757977.1 PFAM: Polyprenyl synthetase; KEGG: mex:Mext_3108 polyprenyl synthetase YP_001757978.1 PFAM: regulatory protein MarR; KEGG: oan:Oant_3938 transcriptional regulator, MarR family YP_001757979.1 PFAM: CBS domain containing protein; Chloride channel core; KEGG: ret:RHE_PC00165 probable chloride channel protein YP_001757981.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis YP_001757982.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: mex:Mext_2848 molybdenum cofactor synthesis domain protein YP_001757983.1 PFAM: aminotransferase class V; KEGG: rxy:Rxyl_2207 aminotransferase, class V YP_001757984.1 KEGG: mlo:mll2083 hypothetical protein YP_001757985.1 KEGG: mex:Mext_3925 hypothetical protein YP_001757986.1 PFAM: glycosyl transferase group 1; KEGG: mlo:mll2084 hypothetical protein YP_001757987.1 PFAM: glycosyl transferase group 1; Protein of unknown function DUF1972; KEGG: mlo:mlr2085 hypothetical protein YP_001757988.1 PFAM: glycoside hydrolase family 5; KEGG: mlo:mlr2086 cellulase YP_001757989.1 KEGG: mlo:mll2088 hypothetical protein YP_001757990.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: mlo:mll2090 hypothetical protein YP_001757992.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: mex:Mext_2363 5-formyltetrahydrofolate cyclo-ligase YP_001757993.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_2362 metallophosphoesterase YP_001757994.1 KEGG: mex:Mext_2361 hypothetical protein YP_001757995.1 PFAM: OmpA/MotB domain protein; KEGG: mex:Mext_2360 OmpA/MotB domain protein YP_001757996.1 KEGG: mex:Mext_1266 chemotaxis sensory transducer YP_001757997.1 KEGG: mex:Mext_2356 lipid A ABC exporter family, fused ATPase and inner membrane subunits; TIGRFAM: lipid A ABC exporter family, fused ATPase and inner membrane subunits; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase YP_001757998.1 TIGRFAM: ribosomal protein L31; KEGG: mex:Mext_2355 ribosomal protein L31 YP_001757999.1 TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; KEGG: bbt:BBta_4856 D-methionine ABC transporter protein, periplasmic binding protein YP_001758000.1 PFAM: protein of unknown function DUF1465; KEGG: mex:Mext_2354 protein of unknown function DUF1465 YP_001758001.1 PFAM: protein of unknown function DUF461; nuclear export factor GLE1; KEGG: mex:Mext_1378 protein of unknown function DUF461 YP_001758002.1 KEGG: mex:Mext_2922 hypothetical protein YP_001758003.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: mex:Mext_1377 peptidoglycan-binding domain 1 protein YP_001758004.1 KEGG: xcb:XC_2373 hypothetical protein YP_001758005.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: mex:Mext_0882 intracellular protease, PfpI family YP_001758006.1 KEGG: mex:Mext_0883 hypothetical protein YP_001758007.1 KEGG: mex:Mext_0885 hypothetical protein YP_001758008.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mex:Mext_0886 cold-shock protein DNA-binding YP_001758009.1 KEGG: mex:Mext_0887 hypothetical protein YP_001758010.1 PFAM: inositol monophosphatase; KEGG: mex:Mext_0895 inositol monophosphatase YP_001758011.1 KEGG: mex:Mext_0896 hypothetical protein YP_001758012.1 TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase; KEGG: mex:Mext_0897 4-hydroxybenzoate polyprenyl transferase YP_001758013.1 KEGG: mex:Mext_0898 conserved hypothetical protein; putative signal peptide YP_001758014.1 PFAM: protein of unknown function DUF558; KEGG: mex:Mext_0899 protein of unknown function DUF558 YP_001758015.1 KEGG: mex:Mext_0901 glutamate--cysteine ligase; TIGRFAM: glutamate--cysteine ligase; PFAM: glutamate--cysteine ligase GCS2 YP_001758016.1 KEGG: bra:BRADO4877 conserved hypothetical protein; putative signal peptide YP_001758017.1 PFAM: SirA family protein; KEGG: mex:Mext_0903 SirA family protein YP_001758018.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_0904 NUDIX hydrolase YP_001758019.1 TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: afw:Anae109_3040 glycosyl transferase, WecB/TagA/CpsF family YP_001758020.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: mlo:mll2090 hypothetical protein YP_001758021.1 PFAM: glycosyl transferase group 1; KEGG: afw:Anae109_1409 glycosyl transferase group 1 YP_001758022.1 PFAM: glycosyl transferase group 1; KEGG: dvl:Dvul_3037 glycosyl transferase, family 2 YP_001758023.1 KEGG: xau:Xaut_0666 selenide, water dikinase; TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_001758024.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: mex:Mext_0187 cytochrome c biogenesis protein transmembrane region YP_001758025.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_1615 metallophosphoesterase YP_001758026.1 KEGG: mex:Mext_1614 hypothetical protein YP_001758028.1 KEGG: mex:Mext_1613 hypothetical protein YP_001758029.1 PFAM: flagellar FlaF family protein; KEGG: mex:Mext_1612 flagellar FlaF family protein YP_001758030.1 PFAM: flagellar FlbT family protein; KEGG: mex:Mext_1248 flagellar FlbT family protein YP_001758031.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KEGG: ccr:CC_0821 oxidoreductase, short-chain dehydrogenase/reductase family YP_001758032.1 KEGG: mex:Mext_0456 hypothetical protein YP_001758033.1 TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; KEGG: mex:Mext_2876 molybdopterin converting factor, subunit 1 YP_001758034.1 TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: mex:Mext_2877 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_001758035.1 TIGRFAM: excinuclease ABC, C subunit; PFAM: Excinuclease ABC C subunit domain protein; excinuclease ABC C subunit domain protein; UvrB/UvrC protein; KEGG: mex:Mext_2878 excinuclease ABC, C subunit YP_001758036.1 KEGG: mex:Mext_2879 hypothetical protein YP_001758037.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2880 ErfK/YbiS/YcfS/YnhG family protein YP_001758038.1 KEGG: mex:Mext_2881 putative periplasmic ligand-binding sensor protein YP_001758039.1 KEGG: mex:Mext_2882 porin YP_001758040.1 PFAM: protein of unknown function DUF152; KEGG: mex:Mext_2883 protein of unknown function DUF152 YP_001758041.1 KEGG: bta:281702 cyclic nucleotide gated channel beta 1 YP_001758042.1 PFAM: protein of unknown function DUF185; KEGG: mex:Mext_2884 protein of unknown function DUF185 YP_001758043.1 PFAM: prolipoprotein diacylglyceryl transferase; KEGG: mex:Mext_2885 prolipoprotein diacylglyceryl transferase YP_001758044.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gvi:glr1161 hypothetical protein YP_001758045.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: sme:SMa0196 putative gluconolactonase precursor YP_001758046.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: acr:Acry_3129 hypothetical protein YP_001758047.1 TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: mex:Mext_3938 replicative DNA helicase YP_001758048.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk YP_001758049.1 KEGG: mex:Mext_3940 hypothetical protein YP_001758050.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit YP_001758051.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21 YP_001758052.1 TIGRFAM: hopanoid-associated sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: mex:Mext_1940 hopanoid-associated sugar epimerase YP_001758053.1 TIGRFAM: squalene synthase HpnC; PFAM: Squalene/phytoene synthase; KEGG: mex:Mext_1941 squalene synthase HpnC YP_001758054.1 TIGRFAM: squalene synthase HpnD; PFAM: Squalene/phytoene synthase; KEGG: mex:Mext_1942 squalene synthase HpnD YP_001758055.1 TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: mex:Mext_1943 squalene-associated FAD-dependent desaturase YP_001758056.1 KEGG: mex:Mext_1944 squalene-hopene cyclase; TIGRFAM: squalene/oxidosqualene cyclase; squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase YP_001758057.1 KEGG: mex:Mext_3461 hypothetical protein YP_001758058.1 KEGG: mex:Mext_4692 protease Do; TIGRFAM: protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_001758060.1 TIGRFAM: valyl-tRNA synthetase; KEGG: mex:Mext_4694 valyl-tRNA synthetase YP_001758061.1 KEGG: mex:Mext_4695 hypothetical protein YP_001758062.1 TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; KEGG: mex:Mext_4696 type I secretion outer membrane protein, TolC family YP_001758063.1 PFAM: Collagen triple helix repeat; KEGG: mex:Mext_0878 collagen triple helix repeat YP_001758065.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: mex:Mext_1002 diguanylate cyclase YP_001758066.1 KEGG: mex:Mext_3136 radical SAM domain protein YP_001758067.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: mex:Mext_3135 CMP/dCMP deaminase zinc-binding YP_001758068.1 PFAM: ETC complex I subunit conserved region; KEGG: mex:Mext_3134 ETC complex I subunit conserved region YP_001758069.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: acr:Acry_2591 gluconolactonase YP_001758070.1 PFAM: Glutathione S-transferase domain; KEGG: mex:Mext_3132 glutathione S-transferase domain YP_001758071.1 PFAM: NUDIX hydrolase; KEGG: mex:Mext_0904 NUDIX hydrolase YP_001758072.1 PFAM: inositol monophosphatase; KEGG: xau:Xaut_1485 inositol monophosphatase YP_001758073.1 KEGG: rru:Rru_A1101 hypothetical protein YP_001758074.1 KEGG: mex:Mext_2346 ATP-dependent chaperone ClpB; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase YP_001758075.1 PFAM: MOSC domain containing protein; KEGG: mex:Mext_2344 MOSC domain containing protein YP_001758076.1 KEGG: bbt:BBta_0312 putative cytochrome c4 precursor YP_001758077.1 KEGG: reu:Reut_A2541 putative membrane-bound dehydrogenase oxidoreductase protein YP_001758078.1 PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; KEGG: mex:Mext_4697 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_001758079.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mex:Mext_4177 cyclohexanone monooxygenase YP_001758080.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: mex:Mext_0126 alpha/beta hydrolase fold-3 domain protein YP_001758081.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_4179 short-chain dehydrogenase/reductase SDR YP_001758082.1 PFAM: regulatory protein TetR; KEGG: acr:Acry_1089 transcriptional regulator, TetR family YP_001758083.1 PFAM: Na+ dependent nucleoside transporter; nucleoside recognition domain protein; Na+ dependent nucleoside transporter domain protein; KEGG: mex:Mext_1971 Na+ dependent nucleoside transporter domain protein YP_001758084.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mex:Mext_0959 ubiquinone biosynthesis O-methyltransferase YP_001758085.1 TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: nha:Nham_3524 magnesium transporter YP_001758086.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mex:Mext_0346 AMP-dependent synthetase and ligase YP_001758087.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mex:Mext_3667 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_001758088.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: mex:Mext_3666 molybdopterin dehydrogenase FAD-binding YP_001758089.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: mex:Mext_3665 (2Fe-2S)-binding domain protein YP_001758090.1 PFAM: aldo/keto reductase; KEGG: mex:Mext_2023 2,5-didehydrogluconate reductase YP_001758091.1 KEGG: mex:Mext_2644 quinolinate synthetase complex, A subunit; TIGRFAM: quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A YP_001758092.1 KEGG: mex:Mext_2645 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001758093.1 KEGG: mex:Mext_2646 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase YP_001758094.1 PFAM: K potassium transporter; KEGG: mex:Mext_2282 K potassium transporter YP_001758095.1 molecular chaperone YP_001758096.1 PFAM: protein of unknown function DUF1239; KEGG: mex:Mext_2498 protein of unknown function DUF1239 YP_001758097.1 PFAM: OstA family protein; KEGG: mex:Mext_2499 OstA family protein YP_001758098.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_2500 ABC transporter related YP_001758099.1 KEGG: mex:Mext_3673 phosphohydrolase (DHH superfamily)-like protein YP_001758100.1 PFAM: major facilitator superfamily MFS_1; KEGG: sus:Acid_4766 major facilitator superfamily MFS_1 YP_001758101.1 PFAM: glycosyl transferase group 1; KEGG: sus:Acid_6231 glycosyl transferase, group 1 YP_001758102.1 KEGG: ret:RHE_CH01892 putative RTX toxin hemolysin-type calcium-binding protein YP_001758103.1 PFAM: glycosyl transferase family 2; KEGG: cau:Caur_1641 glycosyl transferase family 2 YP_001758104.1 PFAM: polysaccharide biosynthesis protein; KEGG: fal:FRAAL2062 putative 3-demethylubiquinone-9 3-O-methyltransferase YP_001758105.1 KEGG: gvi:glr2514 serine acetyltransferase YP_001758106.1 KEGG: psp:PSPPH_1307 serine O-acetyltransferase YP_001758107.1 PFAM: Protein of unknown function DUF1972; KEGG: tbd:Tbd_1781 glycosyltransferase, RfaG YP_001758108.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: noc:Noc_1510 hypothetical protein YP_001758109.1 PFAM: glycosyl transferase family 2; KEGG: rca:Rcas_1949 glycosyl transferase family 2 YP_001758110.1 KEGG: rsq:Rsph17025_3401 polysaccharide deacetylase YP_001758111.1 KEGG: gvi:glr3785 hypothetical protein YP_001758112.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: mca:MCA0149 chain length determinant protein YP_001758113.1 PFAM: polysaccharide export protein; KEGG: pfl:PFL_3082 polysaccharide biosynthesis/export protein YP_001758114.1 SMART: regulatory protein LuxR; KEGG: atc:AGR_C_3081 hypothetical protein YP_001758115.1 KEGG: mex:Mext_0922 hypothetical protein YP_001758116.1 KEGG: mex:Mext_3412 hypothetical protein YP_001758117.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gdi:GDI0820 putative phosphinothricin N-acetyltransferase YP_001758118.1 KEGG: mex:Mext_3413 conserved hypothetical protein YP_001758119.1 PFAM: beta-lactamase; KEGG: mex:Mext_4402 beta-lactamase YP_001758120.1 PFAM: protein of unknown function DUF427; KEGG: mex:Mext_4401 protein of unknown function DUF427 YP_001758121.1 KEGG: mex:Mext_4400 HAD-superfamily hydrolase, subfamily IIB; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase YP_001758122.1 KEGG: mex:Mext_3228 hypothetical protein YP_001758123.1 PFAM: Glucokinase; KEGG: mex:Mext_4399 glucokinase YP_001758124.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: mex:Mext_4276 major facilitator superfamily MFS_1 YP_001758126.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bam:Bamb_4327 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_001758127.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: azc:AZC_1707 putative transcriptional regulator YP_001758128.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: azc:AZC_1708 short-chain dehydrogenase/reductase SDR precursor YP_001758129.1 KEGG: mex:Mext_4871 hypothetical protein YP_001758130.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bxe:Bxe_B0206 short chain dehydrogenase YP_001758131.1 KEGG: eli:ELI_07140 hypothetical protein YP_001758132.1 aliphatic amidase; catalyzes the hydrolysis of short-chain aliphatic amides to their organic acids and can also transfer the acyl moiety of short-chain amides to hydroxylamine to form hydroxamates YP_001758133.1 TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: mex:Mext_3374 regulatory protein, FmdB family YP_001758134.1 PFAM: Acetamidase/Formamidase; KEGG: mex:Mext_3375 formamidase YP_001758135.1 PFAM: alpha/beta hydrolase fold; KEGG: mex:Mext_3376 alpha/beta hydrolase fold YP_001758136.1 KEGG: mex:Mext_3377 UreA ABC transporter, ATP-binding protein UrtE; TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; SMART: AAA ATPase YP_001758137.1 TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: mex:Mext_3378 UreA ABC transporter, ATP-binding protein UrtD YP_001758138.1 TIGRFAM: urea ABC transporter, permease protein UrtC; PFAM: inner-membrane translocator; KEGG: mex:Mext_3379 UreA ABC transporter, permease protein UrtC YP_001758139.1 TIGRFAM: urea ABC transporter, permease protein UrtB; PFAM: inner-membrane translocator; KEGG: mex:Mext_3380 UreA ABC transporter, permease protein UrtB YP_001758140.1 KEGG: mex:Mext_3381 ABC transporter substrate-binding protein YP_001758141.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mex:Mext_3382 ATP-binding region ATPase domain protein YP_001758142.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mex:Mext_3383 response regulator receiver YP_001758143.1 KEGG: mex:Mext_1020 hypothetical protein YP_001758144.1 KEGG: rpc:RPC_3667 hypothetical protein YP_001758145.1 PFAM: protein of unknown function DUF1130; KEGG: mex:Mext_3900 protein of unknown function DUF1130 YP_001758146.1 PFAM: glycoside hydrolase family 25; KEGG: mex:Mext_3899 glycoside hydrolase family 25 YP_001758147.1 SMART: regulatory protein Crp; KEGG: mex:Mext_3898 regulatory protein Crp YP_001758148.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_3844 ABC transporter related YP_001758149.1 PFAM: transport system permease protein; KEGG: mex:Mext_3843 transport system permease protein YP_001758150.1 PFAM: periplasmic binding protein; KEGG: mex:Mext_3842 periplasmic binding protein YP_001758151.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mex:Mext_0464 glyoxalase/bleomycin resistance protein/dioxygenase YP_001758152.1 PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: mex:Mext_4293 heat shock protein DnaJ domain protein YP_001758153.1 KEGG: mex:Mext_4292 enoyl-acyl carrier protein reductase YP_001758154.1 KEGG: sme:SMc02491 hypothetical protein YP_001758155.1 PFAM: protein of unknown function DUF344; KEGG: mex:Mext_4290 protein of unknown function DUF344 YP_001758156.1 PFAM: Phosphoglycerate mutase; KEGG: mex:Mext_4289 phosphoglycerate mutase YP_001758157.1 TIGRFAM: amino acid adenylation domain protein; non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase and ligase; transferase hexapeptide repeat containing protein; phosphopantetheine-binding; KEGG: mex:Mext_3972 non-ribosomal peptide synthetase YP_001758158.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: mex:Mext_2513 diguanylate cyclase YP_001758159.1 KEGG: mex:Mext_0731 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001758160.1 PFAM: SlyX family protein; KEGG: mex:Mext_3034 SlyX family protein YP_001758161.1 PFAM: Aldehyde Dehydrogenase; KEGG: mex:Mext_4206 aldehyde dehydrogenase YP_001758162.1 PFAM: glutamine amidotransferase class-II; KEGG: mex:Mext_3779 glutamine amidotransferase class-II YP_001758163.1 PFAM: response regulator receiver; KEGG: mex:Mext_3778 response regulator receiver YP_001758164.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA YP_001758165.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: azc:AZC_2018 low-specificity L-threonine aldolase YP_001758166.1 PFAM: protein of unknown function DUF1501; KEGG: azc:AZC_3729 hypothetical protein YP_001758167.1 PFAM: Protein of unknown function DUF1800; KEGG: rpa:RPA3597 hypothetical protein YP_001758168.1 TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: mex:Mext_4375 peptide chain release factor 3 YP_001758169.1 PFAM: response regulator receiver; KEGG: mex:Mext_0948 response regulator receiver YP_001758170.1 KEGG: mex:Mext_0949 BLUF domain protein YP_001758171.1 PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; KEGG: mex:Mext_0950 protein of unknown function DUF1078 domain protein YP_001758172.1 TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; KEGG: rpc:RPC_2014 flagellar hook-associated protein YP_001758173.1 KEGG: mex:Mext_0952 hypothetical protein YP_001758175.1 KEGG: mex:Mext_3035 hypothetical protein YP_001758176.1 KEGG: mex:Mext_3043 hypothetical protein YP_001758177.1 KEGG: mex:Mext_3042 hypothetical protein YP_001758178.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum YP_001758179.1 KEGG: mex:Mext_3040 hypothetical protein YP_001758180.1 KEGG: mex:Mext_3442 hypothetical protein YP_001758181.1 KEGG: mex:Mext_0277 molecular chaperone, HSP70 class YP_001758182.1 PFAM: membrane bound O-acyl transferase MBOAT family protein; KEGG: mex:Mext_3038 membrane bound O-acyl transferase MBOAT family protein YP_001758183.1 KEGG: mex:Mext_3037 hypothetical protein YP_001758184.1 TIGRFAM: RNA polymerase-binding protein DksA; PFAM: zinc finger DksA/TraR C4-type; KEGG: mex:Mext_3036 RNA polymerase-binding protein DksA YP_001758185.1 KEGG: mmr:Mmar10_2602 Flp pilus assembly protein TadG YP_001758186.1 PFAM: TadE family protein; KEGG: mex:Mext_3512 TadE family protein YP_001758187.1 PFAM: TadE family protein; KEGG: mex:Mext_3513 TadE family protein YP_001758188.1 KEGG: mdo:100027887 similar to type IIA procollagen YP_001758190.1 PFAM: FAD dependent oxidoreductase; KEGG: rpb:RPB_3648 D-amino-acid dehydrogenase YP_001758191.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation YP_001758192.1 PFAM: UbiE/COQ5 methyltransferase; methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; KEGG: mex:Mext_4752 methyltransferase type 11 YP_001758193.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_4750 major facilitator superfamily MFS_1 YP_001758194.1 PFAM: OmpA/MotB domain protein; KEGG: mex:Mext_4749 OmpA/MotB domain protein YP_001758195.1 KEGG: bmn:BMA10247_A1129 polyketide synthase YP_001758196.1 KEGG: mex:Mext_4748 hypothetical protein YP_001758197.1 PFAM: CreA family protein; KEGG: mex:Mext_4747 CreA family protein YP_001758198.1 KEGG: mex:Mext_4746 hypothetical protein YP_001758199.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA YP_001758200.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: rpc:RPC_1812 peptidase S1 and S6, chymotrypsin/Hap YP_001758201.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_0824 response regulator receiver YP_001758202.1 involved in type III protein export during flagellum assembly YP_001758203.1 TIGRFAM: flagellar export protein FliJ; KEGG: mex:Mext_0822 flagellar export protein FliJ YP_001758204.1 KEGG: mex:Mext_0821 hypothetical protein YP_001758205.1 membrane protein involved in the flagellar export apparatus YP_001758206.1 KEGG: mex:Mext_0817 hypothetical protein YP_001758207.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: mex:Mext_0816 capsule polysaccharide export protein-like protein YP_001758208.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_0815 ABC transporter related YP_001758209.1 KEGG: mex:Mext_1206 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001758210.1 catalyzes the formation of oxalyl-CoA from oxalate and Formyl-CoA YP_001758211.1 PFAM: CBS domain containing protein; HPP family protein?; KEGG: azc:AZC_0146 hypothetical protein YP_001758212.1 PFAM: phospholipase/Carboxylesterase; KEGG: azc:AZC_1806 putative esterase YP_001758213.1 catalyzes the formation of formyl-CoA from oxalyl-CoA YP_001758214.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_1211 major facilitator superfamily MFS_1 YP_001758215.1 KEGG: mex:Mext_1215 hypothetical protein YP_001758216.1 TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; KEGG: sme:SMc02896 branched-chain amino acid aminotransferase YP_001758217.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_2874 ABC transporter related YP_001758218.1 KEGG: rpa:RPA2050 hypothetical protein YP_001758219.1 PFAM: periplasmic solute binding protein; KEGG: mex:Mext_2875 periplasmic solute binding protein YP_001758220.1 PFAM: Heparinase II/III family protein; KEGG: mex:Mext_2567 heparinase II/III family protein YP_001758221.1 KEGG: mex:Mext_2566 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: MGS domain protein; AICARFT/IMPCHase bienzyme formylation region YP_001758223.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: azc:AZC_0877 general substrate transporter YP_001758224.1 TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: mex:Mext_2564 SSS sodium solute transporter superfamily YP_001758225.1 PFAM: protein of unknown function DUF485; KEGG: mex:Mext_2563 protein of unknown function DUF485 YP_001758226.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA YP_001758227.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; KEGG: mex:Mext_2561 PAS sensor protein YP_001758228.1 TIGRFAM: phasin; PFAM: Phasin 2 family protein; KEGG: mex:Mext_2560 phasin YP_001758229.1 KEGG: mex:Mext_2559 hypothetical protein YP_001758230.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mex:Mext_2558 ErfK/YbiS/YcfS/YnhG family protein YP_001758231.1 PFAM: transglutaminase domain protein; KEGG: mex:Mext_2611 transglutaminase domain protein YP_001758232.1 PFAM: transglutaminase domain protein; transglutaminase domain protein; KEGG: rpc:RPC_0967 transglutaminase-like YP_001758233.1 PFAM: response regulator receiver; KEGG: mex:Mext_2557 response regulator receiver YP_001758234.1 KEGG: mex:Mext_2556 hypothetical protein YP_001758235.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_001758236.1 KEGG: mex:Mext_4525 hypothetical protein YP_001758237.1 KEGG: mex:Mext_2391 hypothetical protein YP_001758238.1 KEGG: mex:Mext_2396 hypothetical protein YP_001758239.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: biotin/lipoyl attachment domain-containing protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: pnu:Pnuc_0736 dihydrolipoamide dehydrogenase YP_001758240.1 PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: rso:RSc1601 dihydrolipoamide acetyltransferase YP_001758241.1 paralogs to the E1 component of pyruvate dehydrogenase subunit E1 YP_001758242.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: rru:Rru_A0216 transcriptional regulator, AsnC family YP_001758243.1 PFAM: conserved hypothetical protein; KEGG: mex:Mext_2126 hypothetical protein YP_001758244.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis YP_001758245.1 KEGG: mex:Mext_2129 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region YP_001758246.1 KEGG: mex:Mext_2782 putative transmembrane protein YP_001758247.1 KEGG: mex:Mext_3248 hypothetical protein YP_001758249.1 PFAM: type IV pilus assembly PilZ; KEGG: rpd:RPD_3053 type IV pilus assembly PilZ YP_001758251.1 KEGG: mex:Mext_4515 hypothetical protein YP_001758252.1 PFAM: protein of unknown function DUF1236; KEGG: mes:Meso_1254 hypothetical protein YP_001758253.1 PFAM: formyl transferase domain protein; KEGG: mex:Mext_1060 formyl transferase domain protein YP_001758254.1 PFAM: deoxyribodipyrimidine photolyase-related protein; KEGG: azc:AZC_2742 hypothetical protein YP_001758255.1 KEGG: mex:Mext_1062 hypothetical protein YP_001758256.1 PFAM: Exopolysaccharide synthesis ExoD; KEGG: mex:Mext_1063 exopolysaccharide synthesis ExoD YP_001758257.1 PFAM: regulatory protein MarR; KEGG: mex:Mext_4235 regulatory protein MarR YP_001758258.1 KEGG: mex:Mext_4236 hypothetical protein YP_001758259.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate YP_001758260.1 KEGG: mex:Mext_4239 hypothetical protein YP_001758261.1 PFAM: RDD domain containing protein; KEGG: mex:Mext_4240 RDD domain containing protein YP_001758262.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate YP_001758263.1 TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; KEGG: mex:Mext_0996 adenylosuccinate lyase YP_001758264.1 PFAM: aminotransferase class IV; KEGG: mex:Mext_0997 aminotransferase class IV YP_001758265.1 KEGG: mex:Mext_0998 hypothetical protein YP_001758266.1 PFAM: adenylosuccinate synthetase; KEGG: nwi:Nwi_2965 adenylosuccinate synthetase YP_001758267.1 KEGG: mex:Mext_1000 hypothetical protein YP_001758268.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters YP_001758269.1 KEGG: mex:Mext_1005 pseudouridine synthase, RluA family; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase YP_001758271.1 KEGG: rpd:RPD_3003 outer membrane autotransporter barrel YP_001758273.1 KEGG: mex:Mext_4522 hypothetical protein YP_001758274.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: pol:Bpro_4004 hypothetical protein YP_001758276.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mex:Mext_4462 RNA polymerase sigma factor, sigma-70 family YP_001758277.1 KEGG: pap:PSPA7_0636 transcriptional regulator, LuxR family; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001758278.1 KEGG: acr:Acry_3194 CsbD family protein YP_001758279.1 PFAM: CsbD family protein; KEGG: mex:Mext_0364 CsbD family protein YP_001758280.1 KEGG: mex:Mext_0365 conserved hypothetical membrane spanning protein YP_001758281.1 PFAM: CsbD family protein; KEGG: mex:Mext_0366 CsbD family protein YP_001758282.1 KEGG: mex:Mext_0239 TRAP-type uncharacterized transport system periplasmic component-like protein YP_001758283.1 PFAM: protein of unknown function DUF937; KEGG: mex:Mext_1884 protein of unknown function DUF937 YP_001758284.1 PFAM: protein of unknown function DUF534; KEGG: bja:bll7751 hypothetical protein YP_001758285.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; response regulator receiver; KEGG: bja:blr2864 two-component response regulator YP_001758286.1 PFAM: response regulator receiver; KEGG: bja:bsr2863 two-component response regulator YP_001758287.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: bja:blr2862 two-component hybrid sensor and regulator YP_001758288.1 PFAM: protein of unknown function DUF534; KEGG: bja:bll7751 hypothetical protein YP_001758289.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_2924 TonB-dependent receptor YP_001758290.1 KEGG: rpc:RPC_2422 hypothetical protein YP_001758291.1 PFAM: PepSY-associated TM helix domain protein; KEGG: mex:Mext_2923 PepSY-associated TM helix domain protein YP_001758292.1 KEGG: mex:Mext_2922 hypothetical protein YP_001758293.1 KEGG: mex:Mext_4377 hypothetical protein YP_001758294.1 KEGG: smd:Smed_1295 hypothetical protein YP_001758296.1 KEGG: mlo:mlr8558 hypothetical protein YP_001758297.1 KEGG: ent:Ent638_1655 hypothetical protein YP_001758299.1 KEGG: smd:Smed_1311 hypothetical protein YP_001758301.1 KEGG: oan:Oant_0261 hypothetical protein YP_001758302.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; KEGG: mex:Mext_3182 rare lipoprotein A YP_001758303.1 KEGG: olu:OSTLU_28282 predicted protein YP_001758304.1 PFAM: Tail Collar domain protein; KEGG: xoo:XOO1698 hypothetical protein YP_001758305.1 KEGG: pde:Pden_3770 hypothetical protein YP_001758306.1 KEGG: bra:BRADO0474 hypothetical protein; putative secreted protein YP_001758309.1 KEGG: xau:Xaut_3432 hypothetical protein YP_001758310.1 KEGG: art:Arth_2770 hypothetical protein YP_001758311.1 KEGG: bhe:BH09310 hypothetical genomic island protein YP_001758312.1 KEGG: azc:AZC_0848 hypothetical protein YP_001758313.1 KEGG: azc:AZC_0847 hypothetical protein YP_001758314.1 KEGG: azc:AZC_0846 hypothetical protein YP_001758315.1 KEGG: smd:Smed_1822 hypothetical protein YP_001758316.1 KEGG: azc:AZC_0845 hypothetical protein YP_001758317.1 KEGG: azc:AZC_0844 hypothetical protein YP_001758318.1 KEGG: azc:AZC_0843 hypothetical protein YP_001758319.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_0667 chemotaxis sensory transducer YP_001758320.1 KEGG: mex:Mext_0140 hypothetical protein YP_001758321.1 KEGG: mex:Mext_3923 metal dependent phophohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_001758322.1 KEGG: azc:AZC_0841 hypothetical protein YP_001758323.1 KEGG: azc:AZC_0840 hypothetical protein YP_001758324.1 TIGRFAM: phage terminase, large subunit, PBSX family; PFAM: terminase large subunit; KEGG: mex:Mext_2427 terminase large subunit YP_001758325.1 KEGG: mlo:mlr8001 hypothetical protein YP_001758326.1 KEGG: cko:CKO_01871 hypothetical protein YP_001758327.1 KEGG: mex:Mext_3113 hypothetical protein YP_001758330.1 KEGG: mex:Mext_2431 hypothetical protein YP_001758332.1 PFAM: Resolvase domain; Recombinase; KEGG: mex:Mext_2432 resolvase domain YP_001758333.1 KEGG: mex:Mext_2433 hypothetical protein YP_001758334.1 KEGG: mex:Mext_2434 hypothetical protein YP_001758337.1 PFAM: CheB methylesterase; MCP methyltransferase CheR-type; KEGG: smd:Smed_4278 putative PAS/PAC sensor protein YP_001758339.1 KEGG: rpa:RPA3317 hypothetical protein YP_001758340.1 KEGG: mex:Mext_2437 hypothetical protein YP_001758343.1 PFAM: YcfA family protein; KEGG: pfo:Pfl_0304 hypothetical protein YP_001758344.1 PFAM: protein of unknown function UPF0150; KEGG: btr:Btr_0360 hypothetical protein YP_001758346.1 KEGG: mex:Mext_2440 hypothetical protein YP_001758347.1 KEGG: mex:Mext_2441 hypothetical protein YP_001758349.1 PFAM: endodeoxyribonuclease RusA; KEGG: xau:Xaut_3695 endodeoxyribonuclease RusA YP_001758350.1 KEGG: rsh:Rsph17029_0663 hypothetical protein YP_001758352.1 KEGG: pde:Pden_3765 hypothetical protein YP_001758353.1 KEGG: mex:Mext_2446 hypothetical protein YP_001758357.1 PFAM: helix-turn-helix domain protein; KEGG: pla:Plav_1454 2-oxoglutarate dehydrogenase, E1 subunit YP_001758358.1 PFAM: helix-turn-helix domain protein; KEGG: btr:Btr_0553 hypothetical protein YP_001758359.1 KEGG: xau:Xaut_4322 hypothetical protein YP_001758362.1 PFAM: helix-turn-helix domain protein; KEGG: mex:Mext_3305 helix-turn-helix domain protein YP_001758367.1 PFAM: ERF family protein; KEGG: ppf:Pput_1923 ERF family protein YP_001758368.1 TIGRFAM: phage-type endonuclease; PFAM: Exonuclease, phage-type; KEGG: sit:TM1040_0783 exonuclease YP_001758371.1 PFAM: phosphoadenosine phosphosulfate reductase; KEGG: mes:Meso_2353 phosphoadenosine phosphosulfate reductase YP_001758372.1 PFAM: Gp37Gp68 family protein; KEGG: nwi:Nwi_1564 phage Gp37Gp68 YP_001758373.1 PFAM: protein of unknown function DUF1643; KEGG: ecs:ECs5248 hypothetical protein YP_001758376.1 TIGRFAM: DNA binding domain protein, excisionase family; KEGG: swi:Swit_0663 DNA binding domain, excisionase family YP_001758377.1 PFAM: integrase family protein; KEGG: atc:AGR_L_2007 hypothetical protein YP_001758378.1 KEGG: mex:Mext_2422 hypothetical protein YP_001758379.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: rpd:RPD_0770 GGDEF domain YP_001758380.1 PFAM: protein of unknown function DUF87; KEGG: rpe:RPE_2027 protein of unknown function DUF87 YP_001758382.1 KEGG: mex:Mext_1341 hypothetical protein YP_001758383.1 KEGG: mex:Mext_3360 hypothetical protein YP_001758384.1 catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol YP_001758385.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mex:Mext_3245 acyl-CoA dehydrogenase domain protein YP_001758386.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: mex:Mext_3246 Sel1 domain protein repeat-containing protein YP_001758387.1 KEGG: mex:Mext_3156 hypothetical protein YP_001758389.1 PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; Bacterio-opsin activator HTH domain protein; KEGG: mex:Mext_4514 autoinducer-binding domain protein YP_001758390.1 PFAM: autoinducer synthesis protein; KEGG: nwi:Nwi_0626 autoinducer synthesis protein YP_001758392.1 Converts isocitrate to alpha ketoglutarate YP_001758393.1 TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mex:Mext_3144 RNA methyltransferase, TrmH family, group 1 YP_001758394.1 KEGG: mex:Mext_2636 hypothetical protein YP_001758395.1 KEGG: mex:Mext_2635 heme exporter protein CcmA; TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; SMART: AAA ATPase YP_001758396.1 TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; KEGG: mex:Mext_2634 heme exporter protein CcmB YP_001763278.1 PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: syf:Synpcc7942_0725 DEAD/DEAH box helicase-like YP_001763280.1 PFAM: Prophage CP4-57 regulatory; KEGG: fra:Francci3_1200 excisionase/Xis, DNA-binding YP_001763281.1 KEGG: xau:Xaut_1087 AAA ATPase YP_001763282.1 KEGG: ade:Adeh_0231 Fe-S oxidoreductase YP_001763283.1 KEGG: oan:Oant_3690 hypothetical protein YP_001763284.1 PFAM: terminase GpA; KEGG: oan:Oant_1506 phage terminase GpA YP_001763286.1 KEGG: ypi:YpsIP31758_0906 putative lipoprotein YP_001763287.1 PFAM: peptidase S49; KEGG: rsq:Rsph17025_0104 peptidase S49 YP_001763288.1 KEGG: reu:Reut_C6381 hypothetical protein YP_001763290.1 KEGG: smd:Smed_4252 outer membrane autotransporter barrel domain YP_001763291.1 KEGG: acr:Acry_3225 hypothetical protein YP_001763293.1 KEGG: mex:Mext_3525 hypothetical protein YP_001763297.1 KEGG: rru:Rru_B0002 hypothetical protein YP_001763298.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: rru:Rru_B0001 putative partition protein YP_001763299.1 KEGG: mex:Mext_1998 hypothetical protein YP_001763303.1 KEGG: gdi:GDI3589 hypothetical protein YP_001766464.1 PFAM: Haemagluttinin domain protein; KEGG: xom:XOO_0620 outer membrane protein YP_001766465.1 KEGG: aav:Aave_0511 hypothetical protein YP_001766469.1 PFAM: plasmid encoded RepA protein; KEGG: ppd:Ppro_3841 plasmid encoded RepA protein YP_001766470.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: hso:HS_0441 cell filamentation-like protein YP_001766471.1 KEGG: hso:HS_0440 hypothetical protein YP_001766472.1 PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: psa:PST_0242 probable DNA invertase YP_001766475.1 KEGG: bvi:Bcep1808_7660 hypothetical protein YP_001766477.1 KEGG: bps:BPSS1049 hypothetical bacteriophage protein YP_001766481.1 KEGG: net:Neut_2597 hypothetical protein YP_001766482.1 KEGG: noc:Noc_0626 hypothetical protein YP_001766484.1 KEGG: dre:797093 hypothetical protein LOC797093 YP_001766486.1 PFAM: Lytic transglycosylase catalytic; KEGG: bcs:BCAN_B0072 TraA protein YP_001766487.1 KEGG: xfa:XFa0003 topoisomerase I; TIGRFAM: DNA topoisomerase I; PFAM: TOPRIM domain protein; DNA topoisomerase type IA central domain protein; SMART: DNA topoisomerase I ATP-binding; DNA topoisomerase I DNA-binding; Toprim sub domain protein YP_001766488.1 PFAM: Conjugal transfer protein TrbC; KEGG: bmt:BSUIS_B0072 hypothetical protein YP_001766489.1 PFAM: type IV secretory pathway VirB3 family protein; KEGG: bcs:BCAN_B0070 TraD protein YP_001766490.1 TIGRFAM: type IV secretion/conjugal transfer ATPase, VirB4 family; PFAM: CagE TrbE VirB component of type IV transporter system; KEGG: bms:BRA0066 type IV secretion system protein VirB4 YP_001766491.1 TIGRFAM: P-type DNA transfer protein VirB5; PFAM: type IV secretion system family protein; KEGG: bbr:BB0491 plasmid-related exported protein YP_001766492.1 KEGG: bbr:BB0489 plasmid-related lipoprotein YP_001766493.1 PFAM: TrbL/VirB6 plasmid conjugal transfer protein; KEGG: bcs:BCAN_B0067 protein virB6 YP_001766494.1 KEGG: bcs:BCAN_B0066 TraI protein YP_001766495.1 PFAM: VirB8 family protein; KEGG: bov:BOV_A0057 type IV secretion system protein VirB8 YP_001766496.1 TIGRFAM: P-type conjugative transfer protein VirB9; PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: bcs:BCAN_B0064 P-type conjugative transfer protein VirB9 YP_001766497.1 PFAM: conjugation TrbI family protein; KEGG: bov:BOV_A0055 type IV secretion system protein VirB10 YP_001766498.1 TIGRFAM: P-type DNA transfer ATPase VirB11; PFAM: type II secretion system protein E; KEGG: bov:BOV_A0054 P-type DNA transfer ATPase VirB11 YP_001766499.1 PFAM: TRAG family protein; KEGG: vfi:VFB44 protein VirD4 YP_001766500.1 KEGG: bvi:Bcep1808_5794 putative DNA replication primase protein YP_001766501.1 KEGG: bxe:Bxe_A2645 putative DNA primase, DNA transfer TraO-like protein YP_001766502.1 KEGG: eba:p2A235 putative conjugation protein TraO YP_001766503.1 PFAM: VirBTraTrw family protein; KEGG: bov:BOV_A0053 putative lipoprotein YP_001766504.1 PFAM: TrbM family protein; KEGG: ajs:Ajs_4263 TrbM family protein YP_001766505.1 KEGG: bxe:Bxe_A1768 putative DNA relaxase/nickase, TraS/VirD2-like YP_001766506.1 PFAM: mobilisation protein; KEGG: pst:PSPTO_0530 hypothetical protein YP_001766507.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KorB domain protein; KEGG: bam:Bamb_6603 ParB-like partition proteins YP_001766508.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: eba:p2A247 ParA-like ATPase, probably involved in plasmid partitioning YP_001766510.1 PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: ypi:YpsIP31758_A0009 single-strand binding protein family protein YP_001766514.1 KEGG: net:Neut_2602 hypothetical protein YP_001766515.1 KEGG: dre:797093 hypothetical protein LOC797093 YP_001766516.1 SMART: regulatory protein ArsR; KEGG: mex:Mext_0293 regulatory protein ArsR YP_001766517.1 PFAM: short-chain dehydrogenase/reductase SDR; Male sterility domain; KR domain protein; KEGG: mex:Mext_0292 short-chain dehydrogenase/reductase SDR YP_001766518.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: azc:AZC_2053 putative ring-cleavage extradiol dioxygenase YP_001766520.1 PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; KEGG: rpa:RPA0142 multidomain chemotaxis histidine kinase CheA1 (Hpt, CheA, & CheW domains) YP_001766521.1 PFAM: CheW domain protein; KEGG: bbt:BBta_6736 chemotaxis protein CheW YP_001766522.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: rpc:RPC_4672 methyl-accepting chemotaxis sensory transducer YP_001766523.1 PFAM: CheW domain protein; KEGG: bbt:BBta_6732 chemotaxis protein CheW YP_001766525.1 KEGG: mex:Mext_0141 chemotaxis sensory transducer YP_001766526.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_1118 short-chain dehydrogenase/reductase SDR YP_001766527.1 KEGG: bpm:BURPS1710b_A0489 sensor histidine kinase YP_001766528.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: azc:AZC_1571 NAD-dependent epimerase/dehydratase family protein YP_001766530.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mex:Mext_1782 PAS sensor protein YP_001766532.1 PFAM: response regulator receiver; KEGG: rpb:RPB_4041 response regulator receiver domain protein YP_001766535.1 KEGG: bra:BRADO5752 putative sensor histidine kinase with multiple PAS/PAC and a response regulator receiver domain; TIGRFAM: PAS sensor protein; PFAM: HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001766536.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_0667 chemotaxis sensory transducer YP_001766537.1 KEGG: azc:AZC_3660 sensory box/GGDEF family protein YP_001766538.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: mex:Mext_0947 diguanylate cyclase YP_001766539.1 KEGG: sal:Sala_1606 AAA family ATPase, CDC48 subfamily; TIGRFAM: AAA family ATPase, CDC48 subfamily; PFAM: AAA ATPase VAT domain protein; AAA ATPase central domain protein; cell division protein 48 CDC48 domain 2; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_001766540.1 PFAM: aldo/keto reductase; KEGG: ava:Ava_C0138 aldo/keto reductase YP_001766541.1 PFAM: ABC transporter related; KEGG: mex:Mext_0207 ABC transporter related YP_001766542.1 PFAM: ThiJ/PfpI domain protein; KEGG: mex:Mext_4361 ThiJ/PfpI domain protein YP_001766543.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide YP_001766544.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides YP_001766545.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: bja:bll7201 putative hydantoin racemase YP_001766546.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: vei:Veis_0415 amidohydrolase YP_001766547.1 PFAM: extracellular solute-binding protein family 5; KEGG: azc:AZC_2737 ABC transporter substrate binding protein YP_001766548.1 PFAM: creatinase; peptidase M24; KEGG: rsq:Rsph17025_2053 creatinase YP_001766549.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bbr:BB4721 GntR-family transcriptional regulator YP_001766550.1 PFAM: extracellular solute-binding protein family 3; KEGG: rsh:Rsph17029_3473 extracellular solute-binding protein, family 3 YP_001766551.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsh:Rsph17029_3475 polar amino acid ABC transporter, inner membrane subunit YP_001766552.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rsp:RSP_3745 ABC amino acid transporter, ATPase subunit YP_001766554.1 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide YP_001766555.1 PFAM: LamB/YcsF family protein; KEGG: mex:Mext_4561 LamB/YcsF family protein YP_001766556.1 PFAM: Allophanate hydrolase subunit 1; KEGG: pde:Pden_3430 allophanate hydrolase subunit 1 YP_001766557.1 TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; KEGG: mex:Mext_1535 UreA amidolyase related protein YP_001766558.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: atc:AGR_pAT_700 probable ring-cleaving dioxygenase PA0817 YP_001766559.1 PFAM: extracellular solute-binding protein family 5; KEGG: bja:blr3931 probable substrate-binding protein YP_001766560.1 PFAM: AMP-dependent synthetase and ligase; KEGG: bxe:Bxe_B2354 putative acetyl-CoA synthetase YP_001766561.1 KEGG: bxe:Bxe_B2355 hypothetical protein YP_001766562.1 PFAM: thioesterase superfamily protein; KEGG: bxe:Bxe_B2356 phenylacetic acid degradation-related protein YP_001766563.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bxe:Bxe_B2357 putative zinc-containing alcohol dehydrogenase YP_001766564.1 KEGG: bxe:Bxe_B2352 ABC nitrate/sulfonate/bicarbonate family transporter, periplasmic ligand binding protein YP_001766565.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bxe:Bxe_B2358 ABC nitrate/sulfonate/bicarbonate family transporter, inner membrane subunit YP_001766566.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bxe:Bxe_B2359 ABC nitrate/sulfonate/bicarbonate family transporter, ATPase subunit YP_001766567.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bxe:Bxe_B2360 transcriptional regulator, GntR family YP_001766568.1 PFAM: regulatory protein MarR; KEGG: xau:Xaut_0651 transcriptional regulator, MarR family YP_001766569.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides YP_001766570.1 KEGG: azc:AZC_3762 esterase YP_001766571.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: xau:Xaut_0648 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding YP_001766572.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: xau:Xaut_0647 molybdopterin dehydrogenase FAD-binding YP_001766573.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; carbon monoxide dehydrogenase subunit G; KEGG: xau:Xaut_0646 (2Fe-2S)-binding domain protein YP_001766574.1 PFAM: Extracellular ligand-binding receptor; KEGG: xau:Xaut_0645 extracellular ligand-binding receptor YP_001766575.1 PFAM: inner-membrane translocator; KEGG: xau:Xaut_0644 inner-membrane translocator YP_001766576.1 PFAM: inner-membrane translocator; KEGG: xau:Xaut_0643 inner-membrane translocator YP_001766577.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_0642 ABC transporter related YP_001766578.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:blr3357 ABC transporter ATP-binding protein YP_001766579.1 PFAM: Rieske [2Fe-2S] domain protein; KEGG: bja:blr3358 putative ferredoxin YP_001766580.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: pna:Pnap_2689 two component transcriptional regulator, LuxR family YP_001766581.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pna:Pnap_2688 integral membrane sensor hybrid histidine kinase YP_001766582.1 PFAM: transmembrane pair domain protein; KEGG: mex:Mext_1038 transmembrane pair domain protein YP_001766583.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_1037 LysR substrate-binding YP_001766584.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rpa:RPA0551 transcriptional regulator, LysR family YP_001766585.1 KEGG: bbt:BBta_7199 hypothetical protein; TIGRFAM: urate catabolism protein; PFAM: polysaccharide deacetylase YP_001766586.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: reh:H16_B2481 APC transporter, NCS1 family YP_001766587.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: pol:Bpro_1006 Asp/Glu racemase YP_001766588.1 PFAM: major facilitator superfamily MFS_1; KEGG: reh:H16_B0996 MFS transporter, ACS family YP_001766589.1 TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin; KEGG: reu:Reut_A0032 transthyretin YP_001766590.1 TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin; KEGG: bbt:BBta_7200 putative transthyretin-like protein YP_001766591.1 KEGG: bpd:BURPS668_2387 hypothetical protein YP_001766592.1 PFAM: monooxygenase FAD-binding; KEGG: bvi:Bcep1808_6380 hypothetical protein YP_001766593.1 KEGG: jan:Jann_2955 hypothetical protein YP_001766594.1 PFAM: regulatory protein TetR; KEGG: reu:Reut_B5643 regulatory protein, TetR YP_001766595.1 PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: bja:bll6239 probable carbon monoxide dehydrogenase medium chain YP_001766596.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: acr:Acry_2175 (2Fe-2S)-binding domain protein YP_001766597.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: dsh:Dshi_4202 carbon-monoxide dehydrogenase (acceptor) YP_001766598.1 PFAM: Extracellular ligand-binding receptor; KEGG: mex:Mext_1288 extracellular ligand-binding receptor YP_001766599.1 PFAM: inner-membrane translocator; KEGG: mex:Mext_1287 inner-membrane translocator YP_001766600.1 PFAM: inner-membrane translocator; KEGG: bpt:Bpet1186 putative branched-chain amino acid transport permease YP_001766601.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbr:BB2758 ATP-binding component of ABC transporter protein YP_001766602.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:bll6232 ABC transporter ATP-binding protein YP_001766603.1 PFAM: cyclase/dehydrase; carbon monoxide dehydrogenase subunit G; KEGG: mex:Mext_1283 carbon monoxide dehydrogenase subunit G YP_001766604.1 KEGG: ptr:468249 hypothetical LOC468249 YP_001766605.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: azc:AZC_1030 putative proline/betaine transporter 1 YP_001766606.1 PFAM: regulatory protein MarR; helix-turn-helix HxlR type; KEGG: atc:AGR_C_1578 hypothetical protein YP_001766607.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sme:SMb21384 putative SDR family dehydrogenase protein YP_001766608.1 KEGG: ret:RHE_PF00143 putative tautomerase protein YP_001766609.1 KEGG: rme:Rmet_3854 putative nitrilotriacetate monooxygenase component A YP_001766610.1 PFAM: Luciferase-like monooxygenase; KEGG: mex:Mext_3342 alkanesulfonate monooxygenase YP_001766611.1 KEGG: mex:Mext_3341 aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; SMART: extracellular solute-binding protein family 3 YP_001766612.1 PFAM: Acyl-CoA dehydrogenase type 2 domain; KEGG: mex:Mext_3336 acyl-CoA dehydrogenase type 2 domain YP_001766613.1 KEGG: bxe:Bxe_C0130 hypothetical protein YP_001766614.1 PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; KEGG: bja:bll6121 probable sulfite oxidase YP_001766615.1 PFAM: cytochrome c class I; KEGG: mex:Mext_3340 cytochrome c, class I YP_001766616.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_1202 TonB-dependent siderophore receptor YP_001766617.1 TIGRFAM: high-affinity nickel-transporter; KEGG: bxe:Bxe_C0038 high-affinity nickel transporter YP_001766618.1 KEGG: mex:Mext_3589 hypothetical protein YP_001766619.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_0667 chemotaxis sensory transducer YP_001766621.1 KEGG: ccr:CC_0893 hypothetical protein YP_001766622.1 KEGG: rpc:RPC_2525 TRAP transporter solute receptor, TAXI family YP_001766623.1 PFAM: PAS fold-3 domain protein; KEGG: ccr:CC_0836 sensor histidine kinase, putative YP_001766624.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: rru:Rru_A0090 prevent-host-death protein YP_001766625.1 PFAM: PilT protein domain protein; KEGG: rru:Rru_A0091 PilT protein-like YP_001766626.1 PFAM: regulatory protein TetR; KEGG: atc:AGR_pAT_416 hypothetical protein YP_001766627.1 PFAM: Platelet-activating factor acetylhydrolase plasma/intracellular isoform II; KEGG: mex:Mext_1126 platelet-activating factor acetylhydrolase plasma/intracellular isoform II YP_001766628.1 PFAM: regulatory protein TetR; KEGG: ret:RHE_CH00565 probable transcriptional regulator protein, TetR family YP_001766629.1 PFAM: major facilitator superfamily MFS_1; KEGG: rle:RL0599 putative transmembrane efflux protein YP_001766630.1 PFAM: alpha/beta hydrolase fold; Epoxide hydrolase domain protein; KEGG: ccr:CC_3091 epoxide hydrolase, putative YP_001766631.1 KEGG: gme:Gmet_2448 hypothetical protein YP_001766632.1 PFAM: beta-lactamase domain protein; KEGG: mex:Mext_3268 beta-lactamase domain protein YP_001766633.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: mex:Mext_3269 ATP-binding region ATPase domain protein YP_001766634.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: mex:Mext_3270 response regulator receiver YP_001766635.1 KEGG: mex:Mext_2633 hypothetical protein YP_001766636.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: mex:Mext_1271 SMP-30/gluconolaconase/LRE domain protein YP_001766637.1 PFAM: glycoside hydrolase 15-related; KEGG: rxy:Rxyl_1262 glycoside hydrolase 15-related YP_001766638.1 KEGG: mex:Mext_2792 hypothetical protein YP_001766640.1 PFAM: monooxygenase FAD-binding; KEGG: mex:Mext_0724 monooxygenase FAD-binding YP_001766641.1 PFAM: protein of unknown function DUF72; KEGG: pna:Pnap_0190 protein of unknown function DUF72 YP_001766642.1 KEGG: mfa:Mfla_0012 hypothetical protein YP_001766643.1 KEGG: mgm:Mmc1_2541 DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; SMART: DNA topoisomerase I ATP-binding; DNA topoisomerase I DNA-binding YP_001766644.1 TIGRFAM: potassium efflux system protein; PFAM: TrkA-N domain protein; sodium/hydrogen exchanger; KEGG: mex:Mext_0186 potassium efflux system protein YP_001766645.1 PFAM: sigma-70 region 2 domain protein; KEGG: nar:Saro_0485 sigma-24 (FecI-like) YP_001766646.1 KEGG: mex:Mext_1163 hypothetical protein YP_001766647.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_1162 type I secretion membrane fusion protein, HlyD family YP_001766648.1 KEGG: mex:Mext_1161 type I secretion system ATPase; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; SMART: AAA ATPase YP_001766649.1 PFAM: helix-turn-helix domain protein; KEGG: mex:Mext_1160 helix-turn-helix domain protein YP_001766650.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mex:Mext_1159 RNA polymerase sigma factor, sigma-70 family YP_001766652.1 PFAM: replication protein C; KEGG: sme:SMa2391 RepC2 replication protein YP_001766653.1 TIGRFAM: plasmid partitioning protein RepA; PFAM: regulatory protein MerR; Cobyrinic acid ac-diamide synthase; KEGG: ret:RHE_PA00180 plasmid partitioning protein RepAa1 YP_001766654.1 TIGRFAM: parB-like partition protein; plasmid partitioning protein RepB; PFAM: ParB domain protein nuclease; RepB plasmid partition; KEGG: nha:Nham_4280 RepB plasmid partition YP_001766656.1 PFAM: amidohydrolase 2; KEGG: azo:azo2542 probable 4-oxalomesaconate hydratase YP_001766657.1 PFAM: NHL repeat containing protein; KEGG: bja:bll4058 hypothetical protein YP_001766658.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: psb:Psyr_2177 probable sulfopyruvate decarboxylase YP_001766659.1 KEGG: psb:Psyr_2178 hypothetical protein YP_001766660.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: psb:Psyr_2180 regulatory protein, LysR:LysR, substrate-binding YP_001766661.1 PFAM: major facilitator superfamily MFS_1; KEGG: gox:GOX0208 putative glucarate/galactarate transporter YP_001766662.1 KEGG: mes:Meso_2921 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like YP_001766663.1 KEGG: rle:RL2912 hypothetical protein YP_001766664.1 PFAM: thioesterase superfamily protein; KEGG: sth:STH3036 hypothetical protein YP_001766665.1 KEGG: mex:Mext_4421 hypothetical protein YP_001766666.1 PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mms:mma_0889 ferredoxin/oxidoreductase FAD/NAD(P)-binding YP_001766667.1 KEGG: mms:mma_0888 hypothetical protein YP_001766668.1 TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: mms:mma_0887 translation initiation inhibitor YP_001766669.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: azc:AZC_2788 putative metabolite transport protein YP_001766670.1 PFAM: helix-turn-helix domain protein; protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein; KEGG: rxy:Rxyl_1265 transcriptional regulator, XRE family with cupin sensor YP_001766671.1 PFAM: regulatory protein AsnC/Lrp family; KEGG: mlo:msl0718 probable transcription regulator YP_001766672.1 PFAM: alpha/beta hydrolase fold; KEGG: bja:blr3878 putative hydrolase YP_001766673.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bja:bll3877 transcriptional regulatory protein YP_001766674.1 PFAM: Aldehyde Dehydrogenase; KEGG: bja:bll3876 aldehyde dehydrogenase YP_001766675.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bja:bll3875 hypothetical metabolite transport protein YP_001766676.1 KEGG: sme:SMc00281 hypothetical signal peptide protein YP_001766677.1 KEGG: ret:RHE_CH04039 hypothetical protein YP_001766678.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: bja:bll1016 probable peptidase YP_001766682.1 KEGG: mex:Mext_1750 hypothetical protein YP_001766686.1 PFAM: manganese containing catalase; KEGG: mex:Mext_4224 manganese containing catalase YP_001766688.1 PFAM: alpha/beta hydrolase fold; KEGG: bja:blr7894 epoxide hydrolase YP_001766689.1 PFAM: major facilitator superfamily MFS_1; KEGG: bbt:BBta_3117 putative transport protein (MFS superfamily) YP_001766690.1 PFAM: FAD linked oxidase domain protein; KEGG: xau:Xaut_1422 D-lactate dehydrogenase (cytochrome) YP_001766691.1 PFAM: major facilitator superfamily MFS_1; KEGG: mex:Mext_1951 major facilitator superfamily MFS_1 YP_001766692.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: xau:Xaut_0485 transcriptional regulator, GntR family YP_001766694.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: mex:Mext_3759 RNA polymerase sigma factor, sigma-70 family YP_001766695.1 PFAM: FecR protein; KEGG: mex:Mext_3758 FecR protein YP_001766696.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; Secretin/TonB short domain; TonB-dependent receptor plug; KEGG: azc:AZC_4433 putative TonB-dependent receptor YP_001766697.1 PFAM: PepSY-associated TM helix domain protein; KEGG: rpb:RPB_3271 PepSY-associated TM helix YP_001766699.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: mlo:mll7072 hypothetical protein YP_001766700.1 PFAM: cytochrome P450; KEGG: xau:Xaut_0387 cytochrome P450 YP_001766701.1 SMART: regulatory protein LuxR; KEGG: xau:Xaut_0385 regulatory protein LuxR YP_001766702.1 KEGG: hch:HCH_04215 hypothetical protein YP_001766703.1 KEGG: bja:bll2701 hypothetical protein YP_001766706.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: mex:Mext_1143 protein of unknown function DUF395 YeeE/YedE YP_001766707.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: rxy:Rxyl_1617 protein of unknown function DUF395, YeeE/YedE YP_001766708.1 PFAM: metallophosphoesterase; KEGG: mex:Mext_1127 metallophosphoesterase YP_001766709.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: dac:Daci_0969 HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like) YP_001766710.1 PFAM: alanine racemase domain protein; KEGG: rpc:RPC_0462 alanine racemase-like YP_001766711.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: nar:Saro_3701 transcriptional regulator, LysR family YP_001766712.1 regulator of pathogenicity factor RpfF; involved in synthesis of a diffusible signal factor involved in the regulation of extracellular enzymes YP_001766713.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: bja:bll7151 hypothetical protein YP_001766714.1 PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: eba:ebA6693 transcription regulator protein YP_001766715.1 PFAM: Malate/L-lactate dehydrogenase; KEGG: atc:AGR_C_268 probable L-malate dehydrogenase YP_001766716.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bpt:Bpet0409 D-3-phosphoglycerate dehydrogenase YP_001766717.1 PFAM: sodium:dicarboxylate symporter; KEGG: gur:Gura_0381 sodium:dicarboxylate symporter YP_001766718.1 PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; KEGG: dsh:Dshi_2038 altronate dehydratase YP_001766719.1 KEGG: dsh:Dshi_2037 hypothetical protein YP_001766720.1 PFAM: protein of unknown function DUF81; KEGG: mex:Mext_4839 protein of unknown function DUF81 YP_001766721.1 KEGG: rsh:Rsph17029_3888 ABC nitrate/sulfonate/bicarbonate transporter family, periplasmic substrate-binding protein YP_001766722.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bpt:Bpet0406 acetolactate synthase large subunit YP_001766723.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: bpt:Bpet0404 putative succinate dehydrogenase flavoprotein subunit YP_001766724.1 PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: bpt:Bpet0403 L-tartrate dehydratase, subunit B YP_001766725.1 KEGG: bpt:Bpet0402 fumarate hydratase alpha subunit; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region YP_001766726.1 PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: jan:Jann_3968 succinate dehydrogenase, cytochrome b subunit YP_001766727.1 KEGG: jan:Jann_3967 hypothetical protein YP_001766728.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; KEGG: bpt:Bpet0399 fumarate reductase iron-sulfur protein YP_001766729.1 KEGG: rsh:Rsph17029_3889 ABC nitrate/sulfonate/bicarbonate transporter family, periplasmic substrate-binding protein YP_001766730.1 KEGG: cbh:CLC_2222 hypothetical protein YP_001766731.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_3894 efflux transporter, RND family, MFP subunit YP_001766732.1 TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; KEGG: mex:Mext_3895 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family YP_001766733.1 KEGG: mex:Mext_4054 hypothetical protein YP_001766734.1 PFAM: CDP-diacylglycerol pyrophosphatase; KEGG: gdi:GDI2008 putative CDP-diacylglycerol pyrophosphatase YP_001766735.1 catalyzes the formation of 3-methyl-2-oxobutanoate from 2,3,-dihydroxy-3-methylbutanoate YP_001766736.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: mex:Mext_3795 MATE efflux family protein YP_001766737.1 PFAM: thioesterase superfamily protein; KEGG: cvi:CV_3201 hypothetical protein YP_001766738.1 PFAM: regulatory protein TetR; KEGG: mex:Mext_3797 regulatory protein TetR YP_001766739.1 PFAM: acriflavin resistance protein; KEGG: mex:Mext_3798 acriflavin resistance protein YP_001766740.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: mex:Mext_3799 efflux transporter, RND family, MFP subunit YP_001766741.1 KEGG: mex:Mext_4184 hypothetical protein YP_001766742.1 PFAM: ribonuclease H; KEGG: mex:Mext_0936 ribonuclease H YP_001766744.1 KEGG: gvi:glr1312 hypothetical protein YP_001766745.1 KEGG: mex:Mext_1968 hypothetical protein YP_001766746.1 KEGG: ret:RHE_PE00274 hypothetical protein YP_001766747.1 KEGG: mex:Mext_1992 hypothetical protein YP_001766749.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: bpe:BP0484 L-lactate dehydrogenase YP_001766750.1 PFAM: Extracellular ligand-binding receptor; KEGG: rpc:RPC_1695 extracellular ligand-binding receptor YP_001766751.1 PFAM: inner-membrane translocator; KEGG: rpc:RPC_1696 inner-membrane translocator YP_001766752.1 PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_1697 ABC transporter related YP_001766753.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_1698 ABC transporter related YP_001766754.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress YP_001766757.1 KEGG: mlo:mlr3136 hypothetical protein YP_001766758.1 PFAM: cobalamin B12-binding domain protein; KEGG: mex:Mext_4818 cobalamin B12-binding YP_001766759.1 KEGG: mex:Mext_0810 hypothetical protein YP_001766760.1 KEGG: mex:Mext_3818 hypothetical protein YP_001766761.1 TIGRFAM: esterase, PHB depolymerase family; PFAM: putative esterase; KEGG: mex:Mext_3819 esterase, PHB depolymerase family YP_001766763.1 KEGG: mex:Mext_2198 hypothetical protein YP_001766765.1 KEGG: mex:Mext_2907 protein of unknown function UPF0153 YP_001766768.1 KEGG: mex:Mext_4166 hypothetical protein YP_001766769.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mex:Mext_1893 cold-shock protein DNA-binding YP_001766770.1 KEGG: mex:Mext_1120 hypothetical protein YP_001766771.1 PFAM: Carotenoid oxygenase; KEGG: nar:Saro_3580 carotenoid oxygenase YP_001766772.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mex:Mext_0265 short-chain dehydrogenase/reductase SDR YP_001766773.1 PFAM: helix-turn-helix HxlR type; KEGG: mex:Mext_0266 helix-turn-helix HxlR type YP_001766774.1 KEGG: mlo:msl0491 hypothetical protein YP_001766775.1 PFAM: sodium/hydrogen exchanger; KEGG: rpc:RPC_1941 sodium/hydrogen exchanger YP_001766776.1 KEGG: rpe:RPE_4749 hypothetical protein YP_001766777.1 PFAM: Ion transport protein; Ion transport 2 domain protein; KEGG: mex:Mext_4579 ion transport 2 domain protein YP_001766779.1 exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH YP_001766780.1 KEGG: mex:Mext_4877 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; response regulator receiver; GAF domain protein; Sigma-70 region 4 type 2; PAS fold-3 domain protein; SMART: PAS domain containing protein YP_001766781.1 KEGG: xcv:XCV3867 hypothetical protein YP_001766782.1 PFAM: FAD linked oxidase domain protein; KEGG: azc:AZC_0253 putative FAD/FMN-containing dehydrogenase YP_001766783.1 PFAM: domain of unknown function DUF1738; KEGG: bbt:BBta_7394 putative ArdC antirestriction protein YP_001766784.1 PFAM: Integrase catalytic region; KEGG: mgm:Mmc1_1989 integrase, catalytic region YP_001766785.1 PFAM: transposase IS3/IS911 family protein; KEGG: azc:AZC_3852 transposase YP_001766786.1 KEGG: mes:Meso_3818 hypothetical protein YP_001766787.1 PFAM: ParB domain protein nuclease; KEGG: xau:Xaut_3031 ParB domain protein nuclease YP_001766788.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_4474 ROSMUCR transcriptional regulator YP_001766789.1 PFAM: protein of unknown function DUF736; KEGG: pde:Pden_1518 protein of unknown function DUF736 YP_001766790.1 KEGG: oan:Oant_3175 hypothetical protein YP_001766791.1 KEGG: bbt:BBta_7415 hypothetical protein YP_001766792.1 KEGG: atc:AGR_L_816 hypothetical protein YP_001766793.1 TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: atc:AGR_L_815 hypothetical protein YP_001766794.1 PFAM: helix-turn-helix domain protein; KEGG: rru:Rru_A0278 transcriptional regulator, XRE family YP_001766795.1 KEGG: swi:Swit_5157 hypothetical protein YP_001766797.1 PFAM: Glutathione S-transferase domain; KEGG: psb:Psyr_3548 glutathione S-transferase, N-terminal YP_001766798.1 PFAM: protein of unknown function DUF461; nuclear export factor GLE1; KEGG: mex:Mext_1378 protein of unknown function DUF461 YP_001766799.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_1382 TonB-dependent receptor YP_001766800.1 KEGG: mlo:msl0491 hypothetical protein YP_001766802.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: mex:Mext_1202 TonB-dependent siderophore receptor YP_001766803.1 PFAM: CopG domain protein DNA-binding domain protein; NikR nickel binding; KEGG: bxe:Bxe_C0039 transcriptional regulator, CopG family YP_001766804.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rru:Rru_A2273 nickel transporter ATP-binding protein YP_001766805.1 with NikABCE is involved in nickel transport into the cell YP_001766806.1 with NikABDE is involved in nickel transport into the cell YP_001766807.1 with NikACDE is involved in nickel transport into the cell YP_001766808.1 KEGG: rru:Rru_A2277 nickel ABC transporter, periplasmic nickel-binding; TIGRFAM: nickel ABC transporter, periplasmic nickel-binding protein; PFAM: extracellular solute-binding protein family 5 YP_001766809.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: nha:Nham_2621 TonB-dependent receptor, plug YP_001766810.1 PFAM: periplasmic binding protein; KEGG: mex:Mext_2928 periplasmic binding protein YP_001766811.1 PFAM: transport system permease protein; KEGG: mex:Mext_2927 transport system permease protein YP_001766812.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_2926 ABC transporter related YP_001766813.1 KEGG: mex:Mext_2925 hypothetical protein YP_001766814.1 KEGG: dra:DR_2467 hypothetical protein YP_001766815.1 PFAM: integrase family protein; KEGG: eli:ELI_04185 phage integrase family protein YP_001766816.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bbr:BB4812 hypothetical protein YP_001766817.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce5342 transcriptional regulator, AraC family YP_001766818.1 TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: neu:NE1097 TonB-dependent receptor protein YP_001766819.1 PFAM: FecR protein; KEGG: atc:AGR_pAT_bx251 transmembrane sensor homolog (PigE) YP_001766820.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: bra:BRADO2224 putative sigma-70 factor, ECF subfamily YP_001766821.1 KEGG: maq:Maqu_2105 putative metal dependent phosphohydrolase YP_001766822.1 KEGG: sen:SACE_5323 hypothetical protein YP_001766824.1 PFAM: integrase family protein; KEGG: eli:ELI_04185 phage integrase family protein YP_001766825.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: rsq:Rsph17025_1953 intracellular protease, PfpI family YP_001766826.1 KEGG: mex:Mext_3086 catalase YP_001766827.1 KEGG: rpd:RPD_3256 catalase YP_001766828.1 KEGG: rle:RL1753 hypothetical protein YP_001766829.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_4691 chemotaxis sensory transducer YP_001766831.1 VirD4 family YP_001766832.1 KEGG: rle:pRL80120A conjugal transfer protein TraD YP_001766833.1 KEGG: rle:pRL80121 putative conjugal transfer protein TraC YP_001766834.1 PFAM: transposase IS3/IS911 family protein; KEGG: yps:pYV0018 putative transposase YP_001766835.1 PFAM: Integrase catalytic region; KEGG: ret:RHE_PA00091 probable insertion sequence transposase protein YP_001766836.1 KEGG: ppf:Pput_3004 inner-membrane translocator YP_001766837.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pfl:PFL_2619 branched-chain amino acid ABC transporter, ATP-binding protein YP_001766838.1 KEGG: mex:Mext_3490 putative monooxygenase YP_001766839.1 PFAM: DNA polymerase beta domain protein region; SMART: HEPN domain protein; KEGG: sal:Sala_2595 hypothetical protein YP_001766840.1 PFAM: transposase IS3/IS911 family protein; KEGG: azc:AZC_3852 transposase YP_001766841.1 PFAM: Integrase catalytic region; KEGG: mgm:Mmc1_1989 integrase, catalytic region YP_001766842.1 KEGG: mex:Mext_0541 hypothetical protein YP_001766843.1 KEGG: mex:Mext_0541 hypothetical protein YP_001766844.1 PFAM: carbonic anhydrase; KEGG: mex:Mext_4100 carbonic anhydrase YP_001766845.1 KEGG: gbe:GbCGDNIH1_1526 type I secretion adaptor protein (HlyD family) YP_001766846.1 PFAM: ABC transporter transmembrane region; ABC transporter related; peptidase C39 bacteriocin processing; SMART: AAA ATPase; KEGG: pth:PTH_2380 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain YP_001766847.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gbe:GbCGDNIH1_1528 ABC-type multidrug/protein/lipid transport system, ATPase component YP_001766848.1 KEGG: bbt:BBta_0481 putative transposase YP_001766849.1 KEGG: xau:Xaut_2709 putative transposase YP_001766851.1 KEGG: mex:Mext_4443 porin YP_001766852.1 TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Autotransporter beta- domain protein; KEGG: azc:AZC_1504 putative serine protease YP_001766853.1 KEGG: rpa:RPA2545 possible outer membrane protein YP_001766854.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mex:Mext_0824 response regulator receiver YP_001766855.1 PFAM: integrase family protein; KEGG: mgm:Mmc1_1674 phage integrase family protein YP_001766856.1 KEGG: mag:amb1040 hypothetical protein YP_001766857.1 KEGG: mag:amb1039 hypothetical protein YP_001766858.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: rpc:RPC_0772 phage integrase YP_001766859.1 KEGG: dol:Dole_1891 GCN5-related N-acetyltransferase YP_001766860.1 SMART: AAA ATPase; KEGG: mgi:Mflv_4504 regulatory protein, LuxR YP_001766861.1 KEGG: nha:Nham_3062 hypothetical protein YP_001766862.1 KEGG: gdi:GDI3804 putative transposase YP_001766863.1 PFAM: transposase IS4 family protein; KEGG: rxy:Rxyl_2506 transposase, IS4 YP_001766864.1 KEGG: sco:SCP1.214 putative transposase YP_001766865.1 PFAM: cyclic nucleotide-binding; KEGG: mms:mma_1000 hypothetical protein YP_001766866.1 PFAM: KAP P-loop domain protein; KEGG: shn:Shewana3_4250 kap P-loop domain protein YP_001766867.1 KEGG: shn:Shewana3_4249 hypothetical protein YP_001766868.1 KEGG: shn:Shewana3_4248 hypothetical protein YP_001766869.1 PFAM: TatD-related deoxyribonuclease; KEGG: mmr:Mmar10_2311 TatD-related deoxyribonuclease YP_001766870.1 KEGG: mex:Mext_2626 hypothetical protein YP_001766871.1 KEGG: sco:SCP2.01 putative IS1648 transposase YP_001766872.1 PFAM: integrase family protein; KEGG: fal:FRAAL3720 putative integrase YP_001766873.1 KEGG: pde:Pden_3863 hypothetical protein YP_001766874.1 KEGG: rpb:RPB_1476 hypothetical protein YP_001766875.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: xau:Xaut_2801 fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_001766876.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: xau:Xaut_2802 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_001766877.1 PFAM: HEAT domain containing protein; PBS lyase HEAT domain protein repeat-containing protein; KEGG: xau:Xaut_2803 PBS lyase heat domain protein repeat-containing protein YP_001766878.1 PFAM: cyclic nucleotide-binding; SMART: regulatory protein Crp; KEGG: rpb:RPB_1475 transcriptional regulator, Crp/Fnr family YP_001766879.1 KEGG: xau:Xaut_2084 ABC transporter substrate-binding protein YP_001766880.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: xau:Xaut_2085 binding-protein-dependent transport systems inner membrane component YP_001766881.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:bll3190 ABC transporter ATP-binding protein YP_001766882.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bbt:BBta_7544 ferredoxin II YP_001766883.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mex:Mext_2331 oxidoreductase FAD/NAD(P)-binding domain protein YP_001766884.1 PFAM: cyclic nucleotide-binding; KEGG: rpb:RPB_1475 transcriptional regulator, Crp/Fnr family YP_001766885.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rpb:RPB_1489 peptidase M20 YP_001766886.1 KEGG: bmu:Bmul_0419 taurine ABC transporter, periplasmic binding protein; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; NMT1/THI5 like domain protein; SMART: extracellular solute-binding protein family 3 YP_001766887.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tfu:Tfu_1691 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component YP_001766888.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ent:Ent638_0840 binding-protein-dependent transport systems inner membrane component YP_001766889.1 PFAM: Amidase; KEGG: rpb:RPB_1484 amidase YP_001766890.1 KEGG: nha:Nham_0362 putative PAS/PAC sensor protein YP_001766891.1 PFAM: extracellular solute-binding protein family 1; KEGG: mex:Mext_2852 extracellular solute-binding protein family 1 YP_001766892.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mex:Mext_2851 ABC transporter related YP_001766893.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_2850 binding-protein-dependent transport systems inner membrane component YP_001766894.1 PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; KEGG: mex:Mext_2845 molybdopterin binding domain YP_001766895.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: mex:Mext_2846 molybdenum cofactor synthesis domain protein YP_001766896.1 PFAM: regulatory protein LysR; KEGG: nha:Nham_2952 putative transcriptional regulator, ModE family YP_001766897.1 TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: mex:Mext_4582 formate dehydrogenase, alpha subunit YP_001766898.1 PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: mex:Mext_4581 respiratory-chain NADH dehydrogenase domain 51 kDa subunit YP_001766899.1 KEGG: mex:Mext_4580 hypothetical protein YP_001766900.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: mex:Mext_2847 molybdopterin-guanine dinucleotide biosynthesis protein B YP_001766901.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: mex:Mext_2848 molybdenum cofactor synthesis domain protein YP_001766903.1 KEGG: scl:sce5100 two-component hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001766904.1 PFAM: response regulator receiver; KEGG: sbl:Sbal_0503 response regulator receiver protein YP_001766905.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: amr:AM1_5057 two-component hybrid histidine kinase sensor and regulator YP_001766906.1 SMART: regulatory protein Crp; KEGG: mex:Mext_3898 regulatory protein Crp YP_001766907.1 KEGG: mex:Mext_1190 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: GAF domain protein; HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001766908.1 KEGG: mex:Mext_3896 hypothetical protein YP_001766909.1 KEGG: mex:Mext_1455 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001766910.1 PFAM: alpha/beta hydrolase fold; KEGG: bpt:Bpet3889 putative hydrolase YP_001766911.1 PFAM: Endoribonuclease L-PSP; KEGG: bja:blr4467 hypothetical protein YP_001766912.1 TIGRFAM: urea ABC transporter, urea binding protein; KEGG: mex:Mext_3381 ABC transporter substrate-binding protein YP_001766913.1 PFAM: Urease accessory protein UreD; KEGG: mex:Mext_1199 urease accessory protein UreD YP_001766914.1 TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: mex:Mext_1198 urease accessory protein UreG YP_001766915.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits YP_001766916.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits YP_001766917.1 PFAM: Urease accessory protein UreF; KEGG: mex:Mext_1195 urease accessory protein UreF YP_001766918.1 involved in the assembly of the urease metallocenter; possible nickel donor YP_001766919.1 PFAM: ABC-2 type transporter; KEGG: mex:Mext_2467 ABC-2 type transporter YP_001766920.1 KEGG: mex:Mext_4366 hypothetical protein YP_001766921.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: mex:Mext_4365 helix-turn-helix-domain containing protein AraC type YP_001766922.1 TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin; KEGG: bcs:BCAN_A0516 hydroxyisourate hydrolase YP_001766923.1 PFAM: protein of unknown function DUF989; KEGG: xau:Xaut_3294 protein of unknown function DUF989 YP_001766924.1 KEGG: mjl:Mjls_2022 polysaccharide deacetylase; TIGRFAM: urate catabolism protein; PFAM: polysaccharide deacetylase YP_001766925.1 KEGG: bpd:BURPS668_2387 hypothetical protein YP_001766926.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mex:Mext_1743 carbonate dehydratase YP_001766927.1 KEGG: mex:Mext_1696 conserved hypothetical protein; putative signal peptide YP_001766928.1 PFAM: cytochrome c class I; KEGG: bch:Bcen2424_4418 cytochrome c, class I YP_001766929.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: bur:Bcep18194_B1542 (2Fe-2S)-binding protein YP_001766930.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: bur:Bcep18194_B1541 aldehyde oxidase YP_001766931.1 TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: pfo:Pfl_1701 xanthine/uracil permease YP_001766932.1 catalyzes the transformation of hydroxyatrazine to N-isopropylammelide and ethylamine in the atrazine degradation pathway. YP_001766933.1 PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: mes:Meso_3311 ornithine cyclodeaminase/mu-crystallin YP_001766934.1 PFAM: alanine racemase domain protein; KEGG: mes:Meso_3310 alanine racemase-like YP_001766935.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: mes:Meso_3309 pyridoxal-5'-phosphate-dependent enzyme, beta subunit YP_001766936.1 PFAM: aminotransferase class V; KEGG: sil:SPOA0144 serine--glyoxylate transaminase, putative YP_001766937.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: mes:Meso_3307 transcriptional regulator, IclR family YP_001766938.1 KEGG: mex:Mext_1724 hypothetical protein YP_001766939.1 KEGG: mex:Mext_1112 hypothetical protein YP_001766940.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; CHASE domain protein; KEGG: rpd:RPD_3087 ATP-binding region, ATPase-like YP_001766941.1 PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mex:Mext_4610 radical SAM domain protein YP_001766942.1 PFAM: helix-turn-helix HxlR type; KEGG: oan:Oant_2549 transcriptional regulator, HxlR family YP_001766943.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: gdi:GDI0565 putative glyoxalase YP_001766944.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: hch:HCH_03395 hypothetical protein YP_001766945.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: pen:PSEEN2180 hypothetical protein YP_001766946.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bxe:Bxe_C1284 pyruvate decarboxylase YP_001766947.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: xcb:XC_0553 gluconolactonase precursor YP_001766948.1 KEGG: mex:Mext_0215 chaperone protein HtpG YP_001766949.1 KEGG: mex:Mext_0216 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_001766950.1 PFAM: Polysulphide reductase NrfD; KEGG: mex:Mext_0217 polysulphide reductase NrfD YP_001766951.1 KEGG: mex:Mext_0218 hypothetical protein YP_001766952.1 KEGG: mex:Mext_0219 hypothetical protein YP_001766953.1 KEGG: mex:Mext_0220 hypothetical protein YP_001766954.1 KEGG: mex:Mext_0221 hypothetical protein YP_001766955.1 TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; KEGG: mex:Mext_0222 cytochrome c oxidase, subunit II YP_001766956.1 KEGG: mex:Mext_0223 cytochrome c oxidase, subunit I; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I YP_001766957.1 PFAM: cytochrome c oxidase subunit III; KEGG: mex:Mext_0224 cytochrome c oxidase subunit III YP_001766958.1 TIGRFAM: caa(3)-type oxidase, subunit IV; KEGG: mex:Mext_0225 caa(3)-type oxidase, subunit IV YP_001766959.1 KEGG: bpd:BURPS668_A3114 hypothetical protein YP_001766962.1 KEGG: mex:Mext_0454 hypothetical protein YP_001766964.1 PFAM: glutaredoxin; KEGG: sme:SMa0280 hypothetical protein YP_001766965.1 KEGG: mex:Mext_2213 hypothetical protein YP_001766966.1 KEGG: scl:sce0965 glycosyl hydrolase family 11 member YP_001766967.1 KEGG: mex:Mext_2211 hypothetical protein YP_001766968.1 PFAM: protein of unknown function UPF0118; KEGG: mex:Mext_3812 protein of unknown function UPF0118 YP_001766969.1 PFAM: protein of unknown function DUF1452; KEGG: mex:Mext_1887 protein of unknown function DUF1452 YP_001766970.1 PFAM: response regulator receiver; GAF domain protein; HWE histidine kinase; Phytochrome central region domain protein; PAS fold-2 domain protein; KEGG: bra:BRADO2008 putative bacteriophytochrome YP_001766971.1 KEGG: gme:Gmet_2448 hypothetical protein YP_001766972.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mxa:MXAN_0269 oxidoreductase, zinc-binding dehydrogenase family YP_001766973.1 KEGG: mxa:MXAN_0270 hypothetical protein YP_001766974.1 KEGG: mex:Mext_4877 PAS sensor protein; TIGRFAM: PAS sensor protein; PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001766975.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: mex:Mext_4876 cyclic nucleotide-binding YP_001766976.1 KEGG: sus:Acid_0874 hypothetical protein YP_001766978.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: dsy:DSY1780 hypothetical protein YP_001766979.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bra:BRADO1941 S-(hydroxymethyl)glutathione dehydrogenase (glutathione-dependent formaldehyde dehydrogenase) (fdh) YP_001766980.1 KEGG: bbt:BBta_2246 hypothetical protein YP_001766981.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: mex:Mext_3517 DNA-directed DNA polymerase YP_001766982.1 PFAM: peptidase S24 and S26 domain protein; KEGG: mex:Mext_0361 peptidase S24 and S26 domain protein YP_001766983.1 KEGG: mex:Mext_0360 hypothetical protein YP_001766985.1 PFAM: transposase IS3/IS911 family protein; KEGG: bcs:BCAN_B1096 transposase insN for insertion sequence element IS911 YP_001766986.1 PFAM: Integrase catalytic region; KEGG: bov:BOV_A1015 IS3 family element, transposase orfB YP_001766987.1 PFAM: HWE histidine kinase; KEGG: mex:Mext_2764 HWE histidine kinase YP_001766988.1 PFAM: CheB methylesterase; KEGG: xcc:XCC2021 protein-glutamate methylesterase YP_001766989.1 KEGG: xcb:XC_3757 methyltransferase; TIGRFAM: PAS sensor protein; PFAM: CheB methylesterase; MCP methyltransferase CheR-type; HWE histidine kinase; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001766990.1 PFAM: response regulator receiver; KEGG: mex:Mext_1965 response regulator receiver YP_001766993.1 TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; KEGG: bja:blr2717 cytochrome o ubiquinol oxidase protein YP_001766994.1 KEGG: mex:Mext_0738 hypothetical protein YP_001766995.1 KEGG: mex:Mext_3583 hypothetical protein YP_001766999.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mex:Mext_1892 cold-shock protein DNA-binding YP_001767000.1 KEGG: mex:Mext_2778 hypothetical protein YP_001767001.1 KEGG: mex:Mext_2777 hypothetical protein YP_001767002.1 KEGG: mex:Mext_3805 hypothetical protein YP_001767003.1 PFAM: conserved hypothetical protein; KEGG: nwi:Nwi_0210 conserved hypothetical protein FYDLN acid YP_001767005.1 KEGG: mdo:100030415 hypothetical protein LOC100030415 YP_001767006.1 KEGG: mex:Mext_0047 hypothetical protein YP_001767008.1 KEGG: mex:Mext_0572 hypothetical protein YP_001767009.1 PFAM: PAS fold-3 domain protein; KEGG: mex:Mext_0437 PAS sensor protein YP_001767010.1 KEGG: ade:Adeh_1681 PE-PGRS family protein YP_001767011.1 KEGG: mex:Mext_1123 hypothetical protein YP_001767012.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: mex:Mext_0569 ABC transporter related YP_001767013.1 PFAM: extracellular solute-binding protein family 1; KEGG: mex:Mext_0570 extracellular solute-binding protein family 1 YP_001767014.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mex:Mext_0571 binding-protein-dependent transport systems inner membrane component YP_001767015.1 TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: rpe:RPE_3512 type I secretion membrane fusion protein, HlyD family YP_001767016.1 KEGG: mlo:mll1027 rhizobiocin secretion protein RspD; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; SMART: AAA ATPase YP_001767017.1 KEGG: bcn:Bcen_6532 PE-PGRS family protein YP_001767018.1 PFAM: glycoside hydrolase family 16; KEGG: smd:Smed_4931 glycoside hydrolase family 16 YP_001767019.1 PFAM: ribonuclease BN; KEGG: mex:Mext_1115 ribonuclease BN YP_001767020.1 KEGG: bur:Bcep18194_B1723 conserved hypothetical protein, MmgE/PrpD family YP_001776789.1 KEGG: bbt:BBta_7317 putative ATP-dependent exoDNAse; TIGRFAM: conjugative relaxase domain protein; PFAM: TrwC relaxase; SMART: AAA ATPase YP_001776791.1 KEGG: fre:Franean1_4657 sodium/hydrogen exchanger YP_001776793.1 KEGG: xom:XOO_0530 hypothetical protein YP_001776794.1 KEGG: gox:GOX2551 hypothetical protein YP_001776795.1 TIGRFAM: PAS sensor protein; PFAM: PAS fold-4 domain protein; PAS fold domain protein; KEGG: mex:Mext_0113 PAS sensor protein YP_001776796.1 KEGG: azc:AZC_3153 methyl-accepting chemotaxis receptor; TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001776798.1 PFAM: TRAG family protein; KEGG: rle:pRL120565 putative transmembrane TraG homologue/component of type IV secretion system YP_001776800.1 KEGG: mex:Mext_3525 hypothetical protein YP_001776801.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: xcv:XCVb0021 plasmid partitioning-family protein YP_001776803.1 KEGG: eca:ECA0766 hypothetical protein YP_001776808.1 KEGG: rca:Rcas_3465 hypothetical protein YP_001776809.1 PFAM: Phosphoglycerate mutase; KEGG: rle:RL2665 hypothetical protein YP_001776810.1 PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: kra:Krad_4707 resolvase domain YP_001776811.1 KEGG: mex:Mext_2197 hypothetical protein YP_001776812.1 PFAM: histone family protein DNA-binding protein; KEGG: rpd:RPD_0194 integration host factor subunit beta YP_001776814.1 KEGG: rle:pRL100164 putative autoinducer synthesis protein YP_001776815.1 PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: bja:blr1062 transcriptional regulatory protein YP_001776816.1 KEGG: gox:GOX2551 hypothetical protein YP_001776817.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_4463 ROSMUCR transcriptional regulator YP_001776818.1 KEGG: azc:AZC_3924 hypothetical protein in RpoN 3'region YP_001776819.1 PFAM: ROSMUCR transcriptional regulator; KEGG: ccr:CC_0933 transcriptional regulator YP_001776821.1 KEGG: mex:Mext_3810 hypothetical protein YP_001776822.1 KEGG: mex:Mext_4523 hypothetical protein YP_001776824.1 KEGG: mex:Mext_2197 hypothetical protein YP_001776825.1 PFAM: Resolvase domain; KEGG: rsh:Rsph17029_2027 resolvase, N-terminal domain YP_001776826.1 KEGG: amr:AM1_D0068 hypothetical protein YP_001776827.1 KEGG: ses:SARI_03094 hypothetical protein YP_001776828.1 KEGG: nha:Nham_3895 putative transposase YP_001776829.1 PFAM: helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: vpa:VP1072 putative helicase YP_001776830.1 SMART: helix-turn-helix domain protein; KEGG: aba:Acid345_3587 transcriptional regulator, XRE family YP_001776831.1 PFAM: protein of unknown function DUF891; KEGG: nmu:Nmul_D2815 protein of unknown function DUF891 YP_001783284.1 KEGG: rpe:RPE_1284 hypothetical protein YP_001783285.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: zmo:ZMO0341 oxidoreductase YP_001783286.1 KEGG: bbt:BBta_5400 putative membrane protein of unknown function with acyltransferase family protein domain YP_001783287.1 PFAM: peptidase M19 renal dipeptidase; KEGG: sru:SRU_0391 putative dipeptidase YP_001783288.1 PFAM: peptidase U61 LD-carboxypeptidase A; KEGG: pst:PSPTO_2030 muramoyltetrapeptide carboxypeptidase, putative YP_001783289.1 KEGG: xau:Xaut_2709 putative transposase YP_001783290.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mlo:mll5985 hypothetical protein YP_001783291.1 PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: kra:Krad_4707 resolvase domain YP_001783292.1 KEGG: mex:Mext_2197 hypothetical protein YP_001783293.1 PFAM: histone family protein DNA-binding protein; KEGG: rpd:RPD_0194 integration host factor subunit beta YP_001783295.1 KEGG: rle:pRL100164 putative autoinducer synthesis protein YP_001783296.1 PFAM: regulatory protein LuxR; Autoinducer-binding domain protein; KEGG: bja:blr1062 transcriptional regulatory protein YP_001783297.1 KEGG: gox:GOX2551 hypothetical protein YP_001783298.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_4463 ROSMUCR transcriptional regulator YP_001783299.1 KEGG: azc:AZC_3924 hypothetical protein in RpoN 3'region YP_001783300.1 PFAM: ROSMUCR transcriptional regulator; KEGG: ccr:CC_0933 transcriptional regulator YP_001783302.1 KEGG: mex:Mext_3810 hypothetical protein YP_001783303.1 KEGG: mex:Mext_1246 hypothetical protein YP_001783305.1 PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: swi:Swit_5122 resolvase, N-terminal domain YP_001783307.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: gox:GOX2702 ParA-like protein YP_001783308.1 PFAM: plasmid maintenance system killer; KEGG: rpc:RPC_3186 plasmid maintenance system killer YP_001783309.1 TIGRFAM: addiction module antidote protein, HigA family; KEGG: mag:amb0660 plasmid maintenance system antidote protein YP_001783310.1 KEGG: mex:Mext_3525 hypothetical protein YP_001783311.1 KEGG: oan:Oant_4756 hypothetical protein YP_001783312.1 PFAM: ROSMUCR transcriptional regulator; KEGG: mex:Mext_4474 ROSMUCR transcriptional regulator YP_001783313.1 PFAM: transposase mutator type; KEGG: bja:bll1779 putative transposase YP_001783314.1 PFAM: Integrase catalytic region; KEGG: nha:Nham_4212 integrase, catalytic region YP_001783315.1 PFAM: transposase IS3/IS911 family protein; KEGG: mex:Mext_3547 transposase IS3/IS911 family protein YP_001783316.1 PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: scl:sce5342 transcriptional regulator, AraC family YP_001783317.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bbr:BB4812 hypothetical protein YP_001783318.1 PFAM: GCN5-related N-acetyltransferase; KEGG: fjo:Fjoh_0874 GCN5-related N-acetyltransferase YP_001783319.1 PFAM: Rhodanese domain protein; KEGG: oan:Oant_1235 rhodanese domain protein YP_001783320.1 PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: oan:Oant_1234 transcriptional regulator, AraC family YP_001783321.1 KEGG: mex:Mext_0140 hypothetical protein YP_001783322.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: mex:Mext_2555 chemotaxis sensory transducer YP_001783323.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: pde:Pden_2818 lysine exporter protein (LysE/YggA) YP_001783324.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: mex:Mext_0398 protein of unknown function DUF6 transmembrane YP_001783325.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mca:MCA1911 heavy metal translocating P-type ATPase YP_001783326.1 PFAM: Exopolysaccharide synthesis ExoD; KEGG: ccr:CC_3598 hypothetical protein YP_001783327.1 PFAM: ROSMUCR transcriptional regulator; KEGG: ccr:CC_0933 transcriptional regulator YP_001783328.1 PFAM: adenylate cyclase; KEGG: azc:AZC_3492 hypothetical protein YP_001783329.1 KEGG: mex:Mext_1968 hypothetical protein YP_001783330.1 PFAM: protein of unknown function DUF1625; KEGG: mlo:mll2895 hypothetical protein YP_001783331.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: mex:Mext_2279 Sel1 domain protein repeat-containing protein YP_001783332.1 KEGG: xau:Xaut_2709 putative transposase YP_001783333.1 PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: kra:Krad_4707 resolvase domain YP_001783334.1 KEGG: gox:GOX2551 hypothetical protein YP_001783335.1 PFAM: ROSMUCR transcriptional regulator; KEGG: ccr:CC_0933 transcriptional regulator YP_001783336.1 KEGG: xau:Xaut_0768 hypothetical protein YP_001783338.1 KEGG: mex:Mext_4243 hypothetical protein YP_001783339.1 TIGRFAM: addiction module killer protein; PFAM: protein of unknown function DUF891; KEGG: mex:Mext_4242 addiction module killer protein YP_001783340.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: nha:Nham_3861 cobyrinic acid a,c-diamide synthase YP_001783341.1 KEGG: nha:Nham_3862 hypothetical protein YP_001783342.1 KEGG: bra:BRADO6409 putative replication protein YP_001783343.1 KEGG: bra:BRADO6410 hypothetical protein YP_001783344.1 PFAM: Protein of unknown function DUF1810; KEGG: mex:Mext_0712 protein of unknown function DUF1810 YP_001783345.1 PFAM: Integrase catalytic region; KEGG: nha:Nham_4212 integrase, catalytic region YP_001783346.1 PFAM: transposase IS3/IS911 family protein; KEGG: mex:Mext_3547 transposase IS3/IS911 family protein YP_001783347.1 KEGG: scl:sce5216 transposase, probable YP_001783348.1 KEGG: mex:Mext_3412 hypothetical protein YP_001783349.1 PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: mag:amb2073 DNA polymerase III epsilon subunit and related 3'-5' exonuclease YP_001783350.1 PFAM: MCP methyltransferase CheR-type; KEGG: rpe:RPE_4670 MCP methyltransferase, CheR-type YP_001783351.1 PFAM: EAL domain protein; KEGG: dde:Dde_3417 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) YP_001783352.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: mex:Mext_3867 diguanylate cyclase YP_001783354.1 KEGG: mca:MCA1915 cation-transporting ATPase, E1-E2 family YP_001783355.1 KEGG: pla:Plav_2486 Mg2 transporter protein CorA family protein