-- dump date 20140619_120145 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 575540000001 SEQ_END SEQ_END NC_014957.1 56340 56340 DR NC_014957.1; contig end 56340..56340 Isosphaera pallida ATCC 43644 575540000002 SEQ_END SEQ_END NC_014962.1 5472964 5472964 DR NC_014962.1; contig end 5472964..5472964 Isosphaera pallida ATCC 43644 YP_004169298.1 CDS Isop_3732 NC_014957.1 258 3446 D COGs: COG0515 Serine/threonine protein kinase; InterPro IPR002290: IPR019734: IPR000719: IPR017442: IPR001440; KEGG: sus:Acid_1208 TPR repeat-containing serine/threonin protein kinase; PFAM: Serine/threonine-protein kinase-like domain; Tetratricopeptide TPR_1 repeat-containing protein; SMART: serine/threonine protein kinase; Tetratricopeptide repeat; SPTR: Serine/threonine protein kinase with TPR repeats; PFAM: Protein kinase domain; serine/threonine protein kinase 258..3446 Isosphaera pallida ATCC 43644 10149210 YP_004169299.1 CDS Isop_3733 NC_014957.1 3621 3911 R KEGG: bcj:BCAS0416 putative oxidoreductase; SPTR: 75c; hypothetical protein complement(3621..3911) Isosphaera pallida ATCC 43644 10149179 YP_004169300.1 CDS Isop_3734 NC_014957.1 3974 4180 R SPTR: Bacterial lipid A biosynthesis acyltransferase family; hypothetical protein complement(3974..4180) Isosphaera pallida ATCC 43644 10149180 YP_004169301.1 CDS Isop_3735 NC_014957.1 5975 7552 D COGs: COG1866 Phosphoenolpyruvate carboxykinase (ATP); InterPro IPR015994: IPR001272; KEGG: rmr:Rmar_1197 phosphoenolpyruvate carboxykinase (ATP); PFAM: phosphoenolpyruvate carboxykinase (ATP); SPTR: Phosphoenolpyruvate carboxykinase [ATP]; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); PFAM: Phosphoenolpyruvate carboxykinase; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); phosphoenolpyruvate carboxykinase (ATP) 5975..7552 Isosphaera pallida ATCC 43644 10149181 YP_004169302.1 CDS Isop_3736 NC_014957.1 7911 12407 D COGs: COG0515 Serine/threonine protein kinase; InterPro IPR020635: IPR002290: IPR017441: IPR008271: IPR000719: IPR0174 42; KEGG: rop:ROP_67030 putative serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Putative uncharacterized protein; PFAM: Protein kinase domain; serine/threonine protein kinase 7911..12407 Isosphaera pallida ATCC 43644 10149182 YP_004169303.1 CDS Isop_3737 NC_014957.1 12525 14267 R COGs: COG1027 Aspartate ammonia-lyase; InterPro IPR020557: IPR000362: IPR018951; KEGG: azo:azo0437 aspartate ammonia-lyase; PFAM: fumarate lyase; Fumarase C-like; SPTR: Aspartate ammonia-lyase; PFAM: Fumarase C C-terminus; Lyase; TIGRFAM: aspartate ammonia-lyase; fumarate lyase complement(12525..14267) Isosphaera pallida ATCC 43644 10149183 YP_004169304.1 CDS Isop_3738 NC_014957.1 15289 16104 R KEGG: mmi:MMAR_2116 PE-PGRS family protein; SPTR: PE-PGRS family protein; hypothetical protein complement(15289..16104) Isosphaera pallida ATCC 43644 10149184 YP_004169305.1 CDS Isop_3739 NC_014957.1 16213 16377 D SPTR: Putative uncharacterized protein P0463F06.44; hypothetical protein 16213..16377 Isosphaera pallida ATCC 43644 10149185 YP_004169306.1 CDS Isop_3740 NC_014957.1 17577 17675 R hypothetical protein complement(17577..17675) Isosphaera pallida ATCC 43644 10149186 YP_004169307.1 CDS Isop_3741 NC_014957.1 17722 18201 D KEGG: cqu:CpipJ_CPIJ015082 gbx homeobox protein; SPTR: Gbx homeobox protein; hypothetical protein 17722..18201 Isosphaera pallida ATCC 43644 10149187 YP_004169308.1 CDS Isop_3742 NC_014957.1 18348 19706 D COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterPro IPR001732: IPR014026: IPR014027: IPR017476; KEGG: plm:Plim_4103 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; PRIAM: UDP-glucose 6-dehydrogenase; SPTR: Putative UDPglucoseGDPmannose dehydrogenase protein; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; nucleotide sugar dehydrogenase 18348..19706 Isosphaera pallida ATCC 43644 10149188 YP_004169309.1 CDS Isop_3743 NC_014957.1 19839 21035 R COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mxa:MXAN_1027 glycosyl transferase, group 1 family protein; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1 family protein; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase complement(19839..21035) Isosphaera pallida ATCC 43644 10149189 YP_004169310.1 CDS Isop_3744 NC_014957.1 21431 22258 D InterPro IPR022272; KEGG: mgm:Mmc1_2179 putative outer membrane adhesin like proteiin; SPTR: Putative outer membrane adhesin like proteiin; outer membrane adhesin-like protein 21431..22258 Isosphaera pallida ATCC 43644 10149190 YP_004169311.1 CDS Isop_3745 NC_014957.1 22418 23560 R COGs: COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase; InterPro IPR020583: IPR020550: IPR000760; KEGG: uma:UM01664.1 hypothetical protein; PFAM: inositol monophosphatase; SPTR: Ammonium transporter protein-like; PFAM: Inositol monophosphatase family; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase, HAL2 family; inositol monophosphatase complement(22418..23560) Isosphaera pallida ATCC 43644 10149191 YP_004169312.1 CDS Isop_3746 NC_014957.1 24103 25335 D COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mxa:MXAN_1026 glycosyl transferase, group 1 family protein; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1 family protein; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase 24103..25335 Isosphaera pallida ATCC 43644 10149192 YP_004169313.1 CDS Isop_3747 NC_014957.1 25421 26614 R KEGG: ppl:POSPLDRAFT_134953 eukaryotic translation initiation factor 5B; SPTR: Predicted protein; hypothetical protein complement(25421..26614) Isosphaera pallida ATCC 43644 10149193 YP_004169314.1 CDS Isop_3748 NC_014957.1 27248 28126 D KEGG: sus:Acid_4663 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3485); TIGRFAM: EpsI family protein; hypothetical protein 27248..28126 Isosphaera pallida ATCC 43644 10149194 YP_004169315.1 CDS Isop_3749 NC_014957.1 28148 30937 D COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR003856; KEGG: plm:Plim_4111 capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein; SPTR: Putative uncharacterized protein; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; lipopolysaccharide biosynthesis protein 28148..30937 Isosphaera pallida ATCC 43644 10149195 YP_004169316.1 CDS Isop_3750 NC_014957.1 30934 31998 D InterPro IPR019127: IPR013426; KEGG: dde:Dde_0847 hypothetical protein; PFAM: Exosortase EpsH-related; SPTR: Membrane protein, putative; TIGRFAM: eight transmembrane protein EpsH; PFAM: Transmembrane exosortase (Exosortase_EpsH); TIGRFAM: eight transmembrane protein EpsH (proposed exosortase); transmembrane protein EpsH 30934..31998 Isosphaera pallida ATCC 43644 10149196 YP_004169317.1 CDS Isop_3751 NC_014957.1 32241 37145 D InterPro IPR019734: IPR013026: IPR001440; KEGG: ank:AnaeK_3854 tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Tetratricopeptide TPR_2 repeat protein; hypothetical protein 32241..37145 Isosphaera pallida ATCC 43644 10149197 YP_004169318.1 CDS Isop_3752 NC_014957.1 37260 37904 R InterPro IPR007627: IPR013249: IPR014284; KEGG: rba:RB8027 hypothetical protein; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: Serine/threonine protein kinase; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: ECF sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 family RNA polymerase sigma factor complement(37260..37904) Isosphaera pallida ATCC 43644 10149198 YP_004169319.1 CDS Isop_3753 NC_014957.1 38601 39566 D COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR020904: IPR001509; KEGG: rrs:RoseRS_2395 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family; NAD-dependent epimerase/dehydratase 38601..39566 Isosphaera pallida ATCC 43644 10149199 YP_004169320.1 CDS Isop_3754 NC_014957.1 39648 40319 R KEGG: paa:Paes_0409 RNA polymerase, sigma-24 subunit, ECF subfamily; SPTR: RNA polymerase ECF-type sigma factor; PFAM: ECF sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; hypothetical protein complement(39648..40319) Isosphaera pallida ATCC 43644 10149200 YP_004169321.1 CDS Isop_3755 NC_014957.1 40783 42342 D KEGG: cyn:Cyan7425_1090 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 40783..42342 Isosphaera pallida ATCC 43644 10149201 YP_004169322.1 CDS Isop_3756 NC_014957.1 42425 42670 D KEGG: dpo:Dpse_GA22350 GA22350 gene product from transcript GA22350-RA; SPTR: GA22350; hypothetical protein 42425..42670 Isosphaera pallida ATCC 43644 10149202 YP_004169323.1 CDS Isop_3757 NC_014957.1 42787 44322 R KEGG: msv:Mesil_3348 cupin 2 conserved barrel domain protein; SPTR: Hypothetical conserved protein; PFAM: Replication initiator protein A; hypothetical protein complement(42787..44322) Isosphaera pallida ATCC 43644 10149203 YP_004169324.1 CDS Isop_3758 NC_014957.1 45212 46651 D InterPro IPR013026; KEGG: tgo:TGME49_065500 voltage gated chloride channel domain-containing protein; SPTR: Plus agglutinin; hypothetical protein 45212..46651 Isosphaera pallida ATCC 43644 10149204 YP_004169325.1 CDS Isop_3759 NC_014957.1 49538 50179 R InterPro IPR003751; KEGG: ppp:PHYPADRAFT_159956 hypothetical protein; PFAM: carbon storage regulator; SPTR: Predicted protein; PFAM: Global regulator protein family; carbon storage regulator complement(49538..50179) Isosphaera pallida ATCC 43644 10149205 YP_004169326.1 CDS Isop_3760 NC_014957.1 50684 52267 R InterPro IPR002797; KEGG: gvi:gll3854 hypothetical protein; PFAM: polysaccharide biosynthesis protein; SPTR: Putative uncharacterized protein; polysaccharide biosynthesis protein complement(50684..52267) Isosphaera pallida ATCC 43644 10149206 YP_004169327.1 CDS Isop_3761 NC_014957.1 52442 53098 R KEGG: sro:Sros_9182 RNA polymerase, sigma-24 subunit, ECF subfamily; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; hypothetical protein complement(52442..53098) Isosphaera pallida ATCC 43644 10149207 YP_004169328.1 CDS Isop_3762 NC_014957.1 53223 54251 R COGs: COG1192 ATPase involved in chromosome partitioning; KEGG: afn:Acfer_2072 cobyrinic acid ac-diamide synthase; SPTR: Cobyrinic acid ac-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; hypothetical protein complement(53223..54251) Isosphaera pallida ATCC 43644 10149208 YP_004169329.1 CDS Isop_3763 NC_014957.1 54984 56165 D COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: chl:Chy400_1889 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family; NAD-dependent epimerase/dehydratase 54984..56165 Isosphaera pallida ATCC 43644 10149209 YP_004177147.1 CDS Isop_0001 NC_014962.1 202 1665 D COGs: COG0593 ATPase involved in DNA replication initiation; InterProIPR001957: IPR020591: IPR018312: IPR013317: IPR 013159: IPR003593; KEGG: scl:sce0001 chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase; SPTR: Chromosomal replication initiator protein dnaA; TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA; chromosomal replication initiator protein DnaA 202..1665 Isosphaera pallida ATCC 43644 10157891 YP_004177148.1 CDS Isop_0002 NC_014962.1 1812 2672 R COGs: COG0584 Glycerophosphoryl diester phosphodiesterase; InterPro IPR004129; KEGG: plm:Plim_3666 glycerophosphoryl diester phosphodiesterase; PFAM: glycerophosphoryl diester phosphodiesterase; SPTR: Glycerophosphoryl diester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase family; glycerophosphoryl diester phosphodiesterase complement(1812..2672) Isosphaera pallida ATCC 43644 10154101 YP_004177149.1 CDS Isop_0003 NC_014962.1 2869 3639 R COGs: COG1234 Metal-dependent hydrolase of the beta-lactamase superfamily III; InterPro IPR022272; KEGG: afw:Anae109_0563 beta-lactamase domain-containing protein; SPTR: Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily; beta-lactamase domain-containing protein complement(2869..3639) Isosphaera pallida ATCC 43644 10154102 YP_004177150.1 CDS Isop_0004 NC_014962.1 3869 5296 R COGs: COG3875 conserved hypothetical protein; InterPro IPR018657; KEGG: dol:Dole_2523 hypothetical protein; PFAM: Protein of unknown function DUF2088; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2088); hypothetical protein complement(3869..5296) Isosphaera pallida ATCC 43644 10154103 YP_004177151.1 CDS Isop_0005 NC_014962.1 5658 6110 D COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR020476: IPR020084: IPR000086; KEGG: ngr:NAEGRDRAFT_49855 hypothetical protein; PFAM: NUDIX hydrolase; SPTR: Hydrolase, NUDIX family protein; PFAM: NUDIX domain; NUDIX hydrolase 5658..6110 Isosphaera pallida ATCC 43644 10154104 YP_004177152.1 CDS Isop_0006 NC_014962.1 6513 9764 D COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); InterProIPR011761: IPR006275: IPR005483: IPR005479: IPR 005481: IPR005480: IPR011607; KEGG: psl:Psta_1525 carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein; SPTR: Carbamoyl-phosphate synthase, large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit; carbamoyl-phosphate synthase large subunit 6513..9764 Isosphaera pallida ATCC 43644 10154105 YP_004177153.1 CDS Isop_0007 NC_014962.1 10316 11113 D InterPro IPR018247; KEGG: sit:TM1040_0284 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 10316..11113 Isosphaera pallida ATCC 43644 10154106 YP_004177154.1 CDS Isop_0008 NC_014962.1 11294 11638 D COGs: COG0640 transcriptional regulator protein; InterPro IPR001845; KEGG: bts:Btus_0242 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Transcriptional regulator ArsR; PFAM: Bacterial regulatory protein, arsR family; ArsR family transcriptional regulator 11294..11638 Isosphaera pallida ATCC 43644 10154107 YP_004177155.1 CDS Isop_0009 NC_014962.1 11641 12378 D COGs: COG5658 integral membrane protein; InterPro IPR012867; KEGG: tpd:Teth39_1876 hypothetical protein; PFAM: protein of unknown function DUF1648; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1648); hypothetical protein 11641..12378 Isosphaera pallida ATCC 43644 10154108 YP_004177156.1 CDS Isop_0010 NC_014962.1 12383 13012 R KEGG: rba:RB6463 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(12383..13012) Isosphaera pallida ATCC 43644 10154109 YP_004177157.1 CDS Isop_0011 NC_014962.1 13564 15414 D COGs: COG1109 Phosphomannomutase; InterPro IPR005841: IPR016066: IPR005844: IPR005845; KEGG: rba:RB6061 phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; SPTR: Phosphomannomutase; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I 13564..15414 Isosphaera pallida ATCC 43644 10154110 YP_004177158.1 CDS Isop_0012 NC_014962.1 15667 16851 D COGs: COG3380 NAD/FAD-dependent oxidoreductase; InterPro IPR006076; KEGG: caa:Caka_1904 fumarate reductase/succinate dehydrogenase flavoprotein domain protein; PFAM: FAD dependent oxidoreductase; SPTR: Putative uncharacterized protein; FAD dependent oxidoreductase 15667..16851 Isosphaera pallida ATCC 43644 10154111 YP_004177159.1 CDS Isop_0013 NC_014962.1 16921 17715 D COGs: COG0496 acid phosphatase; InterPro IPR002828; KEGG: psl:Psta_2815 stationary-phase survival protein SurE; PFAM: Survival protein SurE; SPTR: 5'-nucleotidase surE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE; stationary-phase survival protein SurE 16921..17715 Isosphaera pallida ATCC 43644 10154112 YP_004177160.1 CDS Isop_0014 NC_014962.1 17919 18572 D KEGG: psl:Psta_2816 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 17919..18572 Isosphaera pallida ATCC 43644 10154113 YP_004177161.1 CDS Isop_0015 NC_014962.1 19080 20756 D KEGG: mno:Mnod_6296 glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; hypothetical protein 19080..20756 Isosphaera pallida ATCC 43644 10154114 YP_004177162.1 CDS Isop_0016 NC_014962.1 20728 21888 D KEGG: eba:ebA1583 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 20728..21888 Isosphaera pallida ATCC 43644 10154115 YP_004177163.1 CDS Isop_0017 NC_014962.1 22106 22333 R KEGG: mrd:Mrad2831_0866 8-amino-7-oxononanoate synthase; SPTR: Putative 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase; hypothetical protein complement(22106..22333) Isosphaera pallida ATCC 43644 10154116 YP_004177164.1 CDS Isop_0018 NC_014962.1 22302 23156 R KEGG: plm:Plim_0750 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(22302..23156) Isosphaera pallida ATCC 43644 10154117 YP_004177165.1 CDS Isop_0019 NC_014962.1 23306 23869 R KEGG: tva:TVAG_069880 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(23306..23869) Isosphaera pallida ATCC 43644 10154118 YP_004177166.1 CDS Isop_0020 NC_014962.1 24340 25377 R COGs: COG0492 Thioredoxin reductase; InterPro IPR005982: IPR000103: IPR013027: IPR008255; KEGG: acp:A2cp1_4094 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase; thioredoxin reductase complement(24340..25377) Isosphaera pallida ATCC 43644 10154119 YP_004177167.1 CDS Isop_0021 NC_014962.1 25427 26134 D COGs: COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing); InterPro IPR003751; KEGG: nam:NAMH_0494 carbon storage regulator; PFAM: carbon storage regulator; SPTR: Carbon storage regulator homolog; PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA); carbon storage regulator CsrA 25427..26134 Isosphaera pallida ATCC 43644 10154120 YP_004177168.1 CDS Isop_0022 NC_014962.1 26377 27087 R COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR001867; KEGG: psl:Psta_2596 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; SPTR: Phosphate regulon response regulator PhoB; PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; winged helix family two component transcriptional regulator complement(26377..27087) Isosphaera pallida ATCC 43644 10154121 YP_004177169.1 CDS Isop_0023 NC_014962.1 27063 27224 R hypothetical protein complement(27063..27224) Isosphaera pallida ATCC 43644 10154122 YP_004177170.1 CDS Isop_0024 NC_014962.1 27347 28240 R COGs: COG1117 ABC-type phosphate transport system ATPase component; InterPro IPR003439: IPR015850: IPR003593; KEGG: tkm:TK90_0954 phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter; phosphate ABC transporter ATP-binding protein complement(27347..28240) Isosphaera pallida ATCC 43644 10154123 YP_004177171.1 CDS Isop_0025 NC_014962.1 28641 29378 D COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: mmi:MMAR_2311 glycosyl transferase; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase 28641..29378 Isosphaera pallida ATCC 43644 10154124 YP_004177172.1 CDS Isop_0026 NC_014962.1 29576 30886 R COGs: COG4102 conserved hypothetical protein; InterPro IPR001295: IPR010869; KEGG: psl:Psta_4282 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501); hypothetical protein complement(29576..30886) Isosphaera pallida ATCC 43644 10154125 YP_004177173.1 CDS Isop_0027 NC_014962.1 31088 34000 R InterPro IPR003343: IPR011444; KEGG: plm:Plim_4094 protein of unknown function DUF1549; PFAM: protein of unknown function DUF1549; Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial Ig-like domain (group 2); Protein of unknown function (DUF1549); Protein of unknown function (DUF1553); hypothetical protein complement(31088..34000) Isosphaera pallida ATCC 43644 10154126 YP_004177174.1 CDS Isop_0028 NC_014962.1 34101 35036 R KEGG: psl:Psta_4284 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(34101..35036) Isosphaera pallida ATCC 43644 10154127 YP_004177175.1 CDS Isop_0029 NC_014962.1 35037 35903 R KEGG: kse:Ksed_00190 serine/threonine protein kinase; SPTR: Serine/threonine protein kinase; hypothetical protein complement(35037..35903) Isosphaera pallida ATCC 43644 10154128 YP_004177176.1 CDS Isop_0030 NC_014962.1 35900 36481 R COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284: IPR007627: IPR013249; KEGG: psl:Psta_4286 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; ECF subfamily RNA polymerase sigma-24 factor complement(35900..36481) Isosphaera pallida ATCC 43644 10154129 YP_004177177.1 CDS Isop_0031 NC_014962.1 36677 38665 R KEGG: tfu:Tfu_2006 hypothetical protein; SPTR: Serine/threonine protein kinase; hypothetical protein complement(36677..38665) Isosphaera pallida ATCC 43644 10154130 YP_004177178.1 CDS Isop_0032 NC_014962.1 38680 38826 R SPTR: Putative uncharacterized protein; hypothetical protein complement(38680..38826) Isosphaera pallida ATCC 43644 10154131 YP_004177179.1 CDS Isop_0033 NC_014962.1 38882 39373 R COGs: COG1225 Peroxiredoxin; InterPro IPR017936: IPR000866; KEGG: aac:Aaci_1040 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PRIAM: Peroxiredoxin; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: AhpC/TSA family; peroxiredoxin complement(38882..39373) Isosphaera pallida ATCC 43644 10154132 YP_004177180.1 CDS Isop_0034 NC_014962.1 39719 39823 D hypothetical protein 39719..39823 Isosphaera pallida ATCC 43644 10154133 YP_004177181.1 CDS Isop_0035 NC_014962.1 39866 42094 D InterPro IPR002035; KEGG: psl:Psta_3985 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 39866..42094 Isosphaera pallida ATCC 43644 10154134 YP_004177182.1 CDS Isop_0036 NC_014962.1 42258 43664 R COGs: COG2262 GTPase; InterPro IPR016496: IPR005225: IPR006073: IPR002917; KEGG: psl:Psta_3580 GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; SPTR: GTP-binding proten HflX; TIGRFAM: GTP-binding proten HflX; small GTP-binding protein; PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX; small GTP-binding protein domain; GTP-binding protein HflX complement(42258..43664) Isosphaera pallida ATCC 43644 10154135 YP_004177183.1 CDS Isop_0037 NC_014962.1 43782 44765 R COGs: COG0130 Pseudouridine synthase; InterPro IPR014780: IPR002501; KEGG: sti:Sthe_1260 tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; SPTR: TRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase; tRNA pseudouridine synthase B complement(43782..44765) Isosphaera pallida ATCC 43644 10154136 YP_004177184.1 CDS Isop_0038 NC_014962.1 44915 46510 D KEGG: scl:sce2251 hypothetical protein; SPTR: Hypothetical protein; hypothetical protein 44915..46510 Isosphaera pallida ATCC 43644 10154137 YP_004177185.1 CDS Isop_0039 NC_014962.1 46564 47445 D COGs: COG0253 Diaminopimelate epimerase; InterPro IPR001653: IPR018510; KEGG: plm:Plim_0185 diaminopimelate epimerase; PFAM: diaminopimelate epimerase; PRIAM: Diaminopimelate epimerase; SPTR: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; diaminopimelate epimerase 46564..47445 Isosphaera pallida ATCC 43644 10154138 YP_004177186.1 CDS Isop_0040 NC_014962.1 47429 47866 D KEGG: kse:Ksed_00620 malate dehydrogenase; SPTR: Predicted protein; hypothetical protein 47429..47866 Isosphaera pallida ATCC 43644 10154139 YP_004177187.1 CDS Isop_0041 NC_014962.1 47851 48075 R hypothetical protein complement(47851..48075) Isosphaera pallida ATCC 43644 10154140 YP_004177188.1 CDS Isop_0042 NC_014962.1 48410 53644 D COGs: COG2319 FOG: WD40 repeat; InterProIPR019782: IPR017986: IPR009056: IPR019781: IPR 003343: IPR011444: IPR001680; KEGG: plm:Plim_1151 protein of unknown function DUF1549; PFAM: protein of unknown function DUF1549; WD40 repeat, subgroup; Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein; WD-40 repeat-containing protein; SPTR: Putative uncharacterized protein; PFAM: WD domain, G-beta repeat; Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553); hypothetical protein 48410..53644 Isosphaera pallida ATCC 43644 10154141 YP_004177189.1 CDS Isop_0043 NC_014962.1 53923 55416 D InterPro IPR017909: IPR006311: IPR010869; KEGG: plm:Plim_1150 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501); hypothetical protein 53923..55416 Isosphaera pallida ATCC 43644 10154142 YP_004177190.1 CDS Isop_0044 NC_014962.1 55941 58958 D COGs: COG0567 2-oxoglutarate dehydrogenase complex dehydrogenase (E1); InterPro IPR011603: IPR001017: IPR005475; KEGG: sfu:Sfum_3547 2-oxoglutarate dehydrogenase E1 component; PFAM: Transketolase central region; dehydrogenase E1 component; PRIAM: Oxoglutarate dehydrogenase (succinyl-transferring); SPTR: 2-oxoglutarate dehydrogenase, E1 component; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: Dehydrogenase E1 component; Transketolase, pyrimidine binding domain; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component; 2-oxoglutarate dehydrogenase E1 component 55941..58958 Isosphaera pallida ATCC 43644 10154143 YP_004177191.1 CDS Isop_0045 NC_014962.1 59503 60822 D COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterPro IPR000089: IPR006255: IPR004167: IPR001078; KEGG: sti:Sthe_2057 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; SPTR: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component); 2-oxoglutarate dehydrogenase E2 component 59503..60822 Isosphaera pallida ATCC 43644 10154144 YP_004177192.1 CDS Isop_0046 NC_014962.1 61055 62518 D COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterProIPR006258: IPR013027: IPR000815: IPR012999: IPR 004099; KEGG: mag:amb3963 pyruvate/2-oxoglutarate dehydrogenase complex; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: Dihydrolipoyl dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase 61055..62518 Isosphaera pallida ATCC 43644 10154145 YP_004177193.1 CDS Isop_0047 NC_014962.1 62655 65525 R COGs: COG4232 Thiol:disulfide interchange protein; InterPro IPR017936; KEGG: plm:Plim_0535 cytochrome c biogenesis protein transmembrane region; PRIAM: Protein-disulfide reductase; SPTR: Cytochrome c biogenesis protein transmembrane region; PFAM: Cytochrome C biogenesis protein transmembrane region; Protein of unknown function, DUF255; protein-disulfide reductase complement(62655..65525) Isosphaera pallida ATCC 43644 10154146 YP_004177194.1 CDS Isop_0048 NC_014962.1 65793 67313 R KEGG: sus:Acid_2051 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(65793..67313) Isosphaera pallida ATCC 43644 10154147 YP_004177195.1 CDS Isop_0049 NC_014962.1 67620 68405 D COGs: COG3183 restriction endonuclease; InterPro IPR002711; KEGG: tra:Trad_1508 HNH endonuclease; PFAM: HNH endonuclease; SPTR: HNH endonuclease; PFAM: HNH endonuclease; HNH endonuclease 67620..68405 Isosphaera pallida ATCC 43644 10154148 YP_004177196.1 CDS Isop_0050 NC_014962.1 68444 70069 R COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; KEGG: cyb:CYB_0994 hypothetical protein; SPTR: Putative membrane protein; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase; hypothetical protein complement(68444..70069) Isosphaera pallida ATCC 43644 10154149 YP_004177197.1 CDS Isop_0051 NC_014962.1 70278 71690 R COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR010822: IPR001932; KEGG: plm:Plim_3158 stage II sporulation E family protein; PFAM: Stage II sporulation protein E; SMART: protein phosphatase 2C domain protein; SPTR: Stage II sporulation E family protein; PFAM: Stage II sporulation protein E (SpoIIE); protein serine/threonine phosphatase complement(70278..71690) Isosphaera pallida ATCC 43644 10154150 YP_004177198.1 CDS Isop_0052 NC_014962.1 71789 73342 D COGs: COG0037 ATPase of the PP-loop superfamily protein implicated in cell cycle control; InterPro IPR012795: IPR012796: IPR011063; KEGG: dau:Daud_0086 tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; SPTR: tRNA(Ile)-lysidine synthetase; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: TilS substrate C-terminal domain; PP-loop family; TIGRFAM: tRNA(Ile)-lysidine synthetase, C-terminal domain; tRNA(Ile)-lysidine synthetase, N-terminal domain; tRNA(Ile)-lysidine synthetase 71789..73342 Isosphaera pallida ATCC 43644 10154151 YP_004177199.1 CDS Isop_0053 NC_014962.1 73486 74313 R KEGG: ade:Adeh_3797 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(73486..74313) Isosphaera pallida ATCC 43644 10154152 YP_004177200.1 CDS Isop_0054 NC_014962.1 74481 76229 R COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002528; KEGG: gbm:Gbem_1791 polysaccharide biosynthesis protein; PFAM: multi antimicrobial extrusion protein MatE; SPTR: Polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein; multi antimicrobial extrusion protein MatE complement(74481..76229) Isosphaera pallida ATCC 43644 10154153 YP_004177201.1 CDS Isop_0055 NC_014962.1 76640 78823 D InterPro IPR000595; KEGG: tcr:504449.30 hypothetical protein; PFAM: cyclic nucleotide-binding; SPTR: Putative uncharacterized protein; PFAM: Cyclic nucleotide-binding domain; cyclic nucleotide-binding protein 76640..78823 Isosphaera pallida ATCC 43644 10154154 YP_004177202.1 CDS Isop_0056 NC_014962.1 78854 79930 D COGs: COG2340 Uncharacterized protein with SCP/PR1 domains; InterPro IPR014044; KEGG: ami:Amir_2074 SCP-like extracellular; PFAM: SCP-like extracellular; SPTR: Putative uncharacterized protein; PFAM: Cysteine-rich secretory protein family; hypothetical protein 78854..79930 Isosphaera pallida ATCC 43644 10154155 YP_004177203.1 CDS Isop_0057 NC_014962.1 80104 81357 R COGs: COG2340 Uncharacterized protein with SCP/PR1 domains; InterPro IPR019775: IPR014044; KEGG: ter:Tery_4644 allergen V5/TPX-1 related; PFAM: SCP-like extracellular; SPTR: SCP-like extracellular protein, putative; PFAM: Cysteine-rich secretory protein family; hypothetical protein complement(80104..81357) Isosphaera pallida ATCC 43644 10154156 YP_004177204.1 CDS Isop_0058 NC_014962.1 82124 83857 D KEGG: zpr:ZPR_0251 putative secreted protein; SPTR: Putative uncharacterized protein; PFAM: Calcineurin-like phosphoesterase; hypothetical protein 82124..83857 Isosphaera pallida ATCC 43644 10154157 YP_004177205.1 CDS Isop_0059 NC_014962.1 84537 85292 R InterPro IPR010298; KEGG: psl:Psta_2939 protein of unknown function DUF901; PFAM: protein of unknown function DUF901; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF901); hypothetical protein complement(84537..85292) Isosphaera pallida ATCC 43644 10154158 YP_004177206.1 CDS Isop_0060 NC_014962.1 85525 86856 R COGs: COG1004 UDP-glucose 6-dehydrogenase; InterPro IPR017476: IPR001732: IPR014026: IPR014027; KEGG: psl:Psta_1357 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; PRIAM: UDP-glucose 6-dehydrogenase; SPTR: Nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; nucleotide sugar dehydrogenase complement(85525..86856) Isosphaera pallida ATCC 43644 10154159 YP_004177207.1 CDS Isop_0061 NC_014962.1 87189 88601 R COGs: COG0174 Glutamine synthetase; InterPro IPR004809: IPR008147: IPR008146; KEGG: psl:Psta_1754 glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; SPTR: Glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I; L-glutamine synthetase complement(87189..88601) Isosphaera pallida ATCC 43644 10154160 YP_004177208.1 CDS Isop_0062 NC_014962.1 89052 89672 D KEGG: dba:Dbac_1387 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 89052..89672 Isosphaera pallida ATCC 43644 10154161 YP_004177209.1 CDS Isop_0063 NC_014962.1 90553 91590 D KEGG: cin:100178638 similar to topoisomerase (DNA) III alpha; SPTR: Putative uncharacterized protein; hypothetical protein 90553..91590 Isosphaera pallida ATCC 43644 10154162 YP_004177210.1 CDS Isop_0064 NC_014962.1 91735 92763 R InterPro IPR012902; KEGG: plm:Plim_4074 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein complement(91735..92763) Isosphaera pallida ATCC 43644 10154163 YP_004177211.1 CDS Isop_0065 NC_014962.1 93164 93406 R KEGG: tgu:100226598 RAS p21 protein activator (GTPase activating protein) 1; SPTR: TRAP transporter solute receptor, TAXI family; hypothetical protein complement(93164..93406) Isosphaera pallida ATCC 43644 10154164 YP_004177212.1 CDS Isop_0066 NC_014962.1 93765 94586 R COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000639: IPR000073; KEGG: svi:Svir_29320 predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold; SPTR: Predicted hydrolase or acyltransferase of alpha/beta superfamily; PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(93765..94586) Isosphaera pallida ATCC 43644 10154165 YP_004177213.1 CDS Isop_0067 NC_014962.1 94591 96054 R KEGG: ttr:Tter_2666 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(94591..96054) Isosphaera pallida ATCC 43644 10154166 YP_004177214.1 CDS Isop_0068 NC_014962.1 96223 100479 R COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR019782: IPR017986: IPR006530: IPR 017441: IPR008271: IPR019775: IPR017442: IPR019781: IPR020635:I PR002290: IPR001680; KEGG: psl:Psta_3450 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; WD40 repeat, subgroup; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; WD-40 repeat-containing protein; SPTR: Serine/threonine protein kinase; TIGRFAM: YD repeat protein; PFAM: Protein kinase domain; WD domain, G-beta repeat; TIGRFAM: YD repeat (two copies); WD40 repeat-containing serine/threonine protein kinase complement(96223..100479) Isosphaera pallida ATCC 43644 10154167 YP_004177215.1 CDS Isop_0069 NC_014962.1 100476 101465 R COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284: IPR007630; KEGG: psl:Psta_2501 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: sigma-70 region 4 domain protein; SPTR: Probable RNA polymerase sigma-E factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: ECF sigma factor; TIGRFAM: RNA polymerase sigma-70 factor, Planctomycetaceae-specific subfamily 1; RNA polymerase sigma factor, sigma-70 family; ECF subfamily RNA polymerase sigma-24 factor complement(100476..101465) Isosphaera pallida ATCC 43644 10154168 YP_004177216.1 CDS Isop_0070 NC_014962.1 101547 101924 D COGs: COG1607 Acyl-CoA hydrolase; InterPro IPR006683; KEGG: zpr:ZPR_2605 acyl-CoA thioester hydrolase; PFAM: thioesterase superfamily protein; SPTR: Acyl-CoA thioester hydrolase; PFAM: Thioesterase superfamily; thioesterase superfamily protein 101547..101924 Isosphaera pallida ATCC 43644 10154169 YP_004177217.1 CDS Isop_0071 NC_014962.1 101985 102896 R KEGG: psl:Psta_1977 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(101985..102896) Isosphaera pallida ATCC 43644 10154170 YP_004177218.1 CDS Isop_0072 NC_014962.1 103420 105558 D COGs: COG4964 Flp pilus assembly protein secretin CpaC; InterPro IPR001775: IPR001814: IPR007055: IPR004846; KEGG: rba:RB13104 type II secretion system protein; PFAM: type II and III secretion system protein; transport-associated; SPTR: Probable type II secretion system protein; PFAM: Bacterial type II and III secretion system protein; type II and III secretion system protein 103420..105558 Isosphaera pallida ATCC 43644 10154171 YP_004177219.1 CDS Isop_0073 NC_014962.1 105782 107053 D InterPro IPR000209; KEGG: bja:blr0521 hypothetical protein; SPTR: Blr0521 protein; hypothetical protein 105782..107053 Isosphaera pallida ATCC 43644 10154172 YP_004177220.1 CDS Isop_0074 NC_014962.1 107419 108360 D COGs: COG5010 Flp pilus assembly protein TadD contains TPR repeats; InterPro IPR019734: IPR013026: IPR001440; KEGG: ade:Adeh_2822 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Tetratricopeptide repeat protein; PFAM: Tetratricopeptide repeat; hypothetical protein 107419..108360 Isosphaera pallida ATCC 43644 10154173 YP_004177221.1 CDS Isop_0075 NC_014962.1 108535 108843 R KEGG: pan:PODANSg8032 hypothetical protein; SPTR: Chromosome 10 SCAF15123, whole genome shotgun sequence.; hypothetical protein complement(108535..108843) Isosphaera pallida ATCC 43644 10154174 YP_004177222.1 CDS Isop_0076 NC_014962.1 108850 110532 R COGs: COG0443 Molecular chaperone; InterPro IPR001023: IPR018181: IPR013126; KEGG: cac:CA_C0472 HSP70/DnaK family protein; PFAM: Heat shock protein 70; SPTR: Chaperone protein dnaK; PFAM: Hsp70 protein; Heat shock protein 70 complement(108850..110532) Isosphaera pallida ATCC 43644 10154175 YP_004177223.1 CDS Isop_0077 NC_014962.1 110670 111377 R InterPro IPR003675; KEGG: noc:Noc_1193 abortive infection protein; PFAM: Abortive infection protein; SPTR: Abortive infection protein; PFAM: CAAX amino terminal protease family; abortive infection protein complement(110670..111377) Isosphaera pallida ATCC 43644 10154176 YP_004177224.1 CDS Isop_0078 NC_014962.1 111844 112947 D InterPro IPR000866: IPR005123: IPR006620; KEGG: rlg:Rleg_5934 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: AhpC/TSA family; alkyl hydroperoxide reductase 111844..112947 Isosphaera pallida ATCC 43644 10154177 YP_004177225.1 CDS Isop_0079 NC_014962.1 113129 114184 D COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: plm:Plim_2996 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase domain-containing protein 113129..114184 Isosphaera pallida ATCC 43644 10154178 YP_004177226.1 CDS Isop_0080 NC_014962.1 114225 115163 R InterPro IPR001845; KEGG: plm:Plim_2033 regulatory protein ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: ArsR family transcriptional regulator; PFAM: Bacterial regulatory protein, arsR family; regulatory protein ArsR complement(114225..115163) Isosphaera pallida ATCC 43644 10154179 YP_004177227.1 CDS Isop_0081 NC_014962.1 115700 116518 D InterPro IPR014284: IPR000792; KEGG: bxe:Bxe_C1157 two component LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; SPTR: Putative uncharacterized protein; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Bacterial regulatory proteins, luxR family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 familyRNA polymerase sigma factor 115700..116518 Isosphaera pallida ATCC 43644 10154180 YP_004177228.1 CDS Isop_0082 NC_014962.1 116717 118855 D COGs: COG0465 ATP-dependent Zn protease; InterProIPR005936: IPR003960: IPR003959: IPR000642: IPR 003593; KEGG: plm:Plim_1623 ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; PRIAM: Microtubule-severing ATPase; SMART: AAA ATPase; SPTR: Cell division protein FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH; membrane protease FtsH catalytic subunit 116717..118855 Isosphaera pallida ATCC 43644 10154181 YP_004177229.1 CDS Isop_0083 NC_014962.1 118942 119925 D COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR002139: IPR011611; KEGG: syx:SynWH7803_0167 ribokinase family sugar kinase; PFAM: PfkB domain protein; SPTR: Putative sugar kinase; PFAM: pfkB family carbohydrate kinase; PfkB domain-containing protein 118942..119925 Isosphaera pallida ATCC 43644 10154182 YP_004177230.1 CDS Isop_0084 NC_014962.1 120029 120847 R COGs: COG0560 Phosphoserine phosphatase; InterPro IPR006383: IPR006385: IPR005834; KEGG: hch:HCH_05985 phosphoserine phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: Phosphoserine phosphatase; TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase, subfamily IB (PSPase-like); TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; HAD-superfamily hydrolase complement(120029..120847) Isosphaera pallida ATCC 43644 10154183 YP_004177231.1 CDS Isop_0085 NC_014962.1 120844 122343 R COGs: COG1109 Phosphomannomutase; InterProIPR005841: IPR005844: IPR005845: IPR005846: IPR 005843; KEGG: rba:RB9832 phosphomannomutase (pmm); PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; SPTR: Phosphomannomutase (Pmm); PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I complement(120844..122343) Isosphaera pallida ATCC 43644 10154184 YP_004177232.1 CDS Isop_0086 NC_014962.1 123602 124831 D COGs: COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; InterPro IPR017476: IPR001732: IPR014027; KEGG: nml:Namu_4191 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase; SPTR: Nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; nucleotide sugar dehydrogenase 123602..124831 Isosphaera pallida ATCC 43644 10154185 YP_004177233.1 CDS Isop_0087 NC_014962.1 124839 125870 D COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: mmi:MMAR_2310 UDP-glucose 4-epimerase, GalE5; PFAM: NAD-dependent epimerase/dehydratase; SPTR: UDP-glucose 4-epimerase, GalE5; manually curated; PFAM: NAD dependent epimerase/dehydratase family; NAD-dependent epimerase/dehydratase 124839..125870 Isosphaera pallida ATCC 43644 10154186 YP_004177234.1 CDS Isop_0088 NC_014962.1 125918 128383 D COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR002469; KEGG: hoh:Hoch_4258 peptidase S9B dipeptidylpeptidase IV domain protein; PFAM: peptidase S9B dipeptidylpeptidase IV domain protein; SPTR: Peptidase S9B dipeptidylpeptidase IV domain protein; PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region; peptidase S9B dipeptidylpeptidase IV domain-containing protein 125918..128383 Isosphaera pallida ATCC 43644 10154187 YP_004177235.1 CDS Isop_0089 NC_014962.1 128505 131234 D COGs: COG1331 Highly conserved protein containing a thioredoxin domain; InterPro IPR010819; KEGG: bts:Btus_0399 protein of unknown function DUF255; PFAM: N-acylglucosamine 2-epimerase; SPTR: Putative uncharacterized protein; PFAM: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); Protein of unknown function, DUF255; N-acylglucosamine 2-epimerase 128505..131234 Isosphaera pallida ATCC 43644 10154188 YP_004177236.1 CDS Isop_0090 NC_014962.1 131307 132593 D COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000253: IPR000160; KEGG: afw:Anae109_4141 diguanylate cyclase; PFAM: GGDEF domain containing protein; Forkhead-associated protein; SMART: GGDEF domain containing protein; Forkhead-associated protein; SPTR: Diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; FHA domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 131307..132593 Isosphaera pallida ATCC 43644 10154189 YP_004177237.1 CDS Isop_0091 NC_014962.1 132672 133523 R COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: plm:Plim_3631 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: Xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase-like TIM barrel; xylose isomerase domain-containing protein complement(132672..133523) Isosphaera pallida ATCC 43644 10154190 YP_004177238.1 CDS Isop_0092 NC_014962.1 133520 134440 R COGs: COG0190 5 10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; InterPro IPR000672: IPR020867: IPR020630: IPR020631; KEGG: acr:Acry_2656 methylenetetrahydrofolate dehydrogenase (NADP(+)); PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; PRIAM: Methenyltetrahydrofolate cyclohydrolase; SPTR: Bifunctional protein folD; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; 5,10-methylenetetrahydrofolate dehydrogenase complement(133520..134440) Isosphaera pallida ATCC 43644 10154191 YP_004177239.1 CDS Isop_0093 NC_014962.1 134560 135090 R InterPro IPR002645; KEGG: tle:Tlet_0344 anti-sigma-factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; sulfate transporter/antisigma-factor antagonist STAS complement(134560..135090) Isosphaera pallida ATCC 43644 10154192 YP_004177240.1 CDS Isop_0094 NC_014962.1 135419 136711 D KEGG: bpl:BURPS1106A_3676 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 135419..136711 Isosphaera pallida ATCC 43644 10154193 YP_004177241.1 CDS Isop_0095 NC_014962.1 137010 138683 D COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891: IPR005675: IPR002034: IPR013709; KEGG: plm:Plim_2070 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain-containing protein; SPTR: 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; 2-isopropylmalate synthase 137010..138683 Isosphaera pallida ATCC 43644 10154194 YP_004177242.1 CDS Isop_0096 NC_014962.1 138899 141697 D COGs: COG0525 Valyl-tRNA synthetase; InterProIPR002303: IPR019754: IPR001412: IPR002300: IPR 013155: IPR019499; KEGG: plm:Plim_2069 valyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ia; tRNA synthetase valyl/leucyl anticodon-binding; Valyl-tRNA synthetase, class Ia, tRNA binding arm; SPTR: Valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase; valyl-tRNA synthetase 138899..141697 Isosphaera pallida ATCC 43644 10154195 YP_004177243.1 CDS Isop_0097 NC_014962.1 141790 142389 R InterPro IPR000086; KEGG: sus:Acid_0573 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: NUDIX hydrolase; PFAM: NUDIX domain; NUDIX hydrolase complement(141790..142389) Isosphaera pallida ATCC 43644 10154196 YP_004177244.1 CDS Isop_0098 NC_014962.1 142404 146579 R COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR019782: IPR017986: IPR017441: IPR 008271: IPR019775: IPR017442: IPR019781: IPR020635: IPR002290:I PR001680; KEGG: psl:Psta_3450 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; WD40 repeat, subgroup; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; WD-40 repeat-containing protein; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain; WD domain, G-beta repeat; WD40 repeat-containing serine/threonine protein kinase complement(142404..146579) Isosphaera pallida ATCC 43644 10154197 YP_004177245.1 CDS Isop_0099 NC_014962.1 146983 147822 D COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284: IPR007627: IPR013249; KEGG: psl:Psta_2330 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; ECF subfamily RNA polymerase sigma-24 factor 146983..147822 Isosphaera pallida ATCC 43644 10154198 YP_004177246.1 CDS Isop_0100 NC_014962.1 147800 149323 D KEGG: cmi:CMM_0482 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 147800..149323 Isosphaera pallida ATCC 43644 10154199 YP_004177247.1 CDS Isop_0101 NC_014962.1 149496 150653 R COGs: COG0192 S-adenosylmethionine synthetase; InterPro IPR002133; KEGG: psl:Psta_1334 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase; PRIAM: Methionine adenosyltransferase; SPTR: S-adenosylmethionine synthase; TIGRFAM: S-adenosylmethionine synthetase; manually curated; PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, N-terminal domain; S-adenosylmethionine synthetase, central domain; TIGRFAM: S-adenosylmethionine synthetase; methionine adenosyltransferase complement(149496..150653) Isosphaera pallida ATCC 43644 10154200 YP_004177248.1 CDS Isop_0102 NC_014962.1 150824 151081 D KEGG: ptr:461611 F-box protein 8; SPTR: Putative uncharacterized protein; F-box protein 8 150824..151081 Isosphaera pallida ATCC 43644 10154201 YP_004177249.1 CDS Isop_0103 NC_014962.1 150983 151864 R KEGG: slo:Shew_0685 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(150983..151864) Isosphaera pallida ATCC 43644 10154202 YP_004177250.1 CDS Isop_0104 NC_014962.1 152049 154199 R COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: chl:Chy400_1467 sulfatase; PFAM: sulfatase; SPTR: Sulfatase; PFAM: Sulfatase; sulfatase complement(152049..154199) Isosphaera pallida ATCC 43644 10154203 YP_004177251.1 CDS Isop_0105 NC_014962.1 154555 158265 R COGs: COG0085 DNA-directed RNA polymerase beta subunit/140 kD subunit; InterProIPR010243: IPR007121: IPR007644: IPR007642: IPR 007645: IPR019462: IPR007120: IPR007641; KEGG: psl:Psta_2551 DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 3; RNA polymerase Rpb2 domain 2; RNA polymerase beta subunit; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2 domain 7; SPTR: DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit; DNA-directed RNA polymerase subunit beta complement(154555..158265) Isosphaera pallida ATCC 43644 10154204 YP_004177252.1 CDS Isop_0106 NC_014962.1 158685 159089 R COGs: COG0222 Ribosomal protein L7/L12; InterPro IPR000206: IPR013823; KEGG: rmr:Rmar_1107 ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12; SPTR: 50S ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12; 50S ribosomal protein L12 complement(158685..159089) Isosphaera pallida ATCC 43644 10154205 YP_004177253.1 CDS Isop_0107 NC_014962.1 159275 159814 R COGs: COG0244 Ribosomal protein L10; InterPro IPR001790; KEGG: plm:Plim_0441 ribosomal protein L10-like protein; PFAM: ribosomal protein L10; SPTR: Probable 50S ribosomal protein L10; PFAM: Ribosomal protein L10; 50S ribosomal protein L10 complement(159275..159814) Isosphaera pallida ATCC 43644 10154206 YP_004177254.1 CDS Isop_0108 NC_014962.1 159840 160523 R COGs: COG0081 Ribosomal protein L1; InterPro IPR002143: IPR005878; KEGG: psl:Psta_2555 ribosomal protein L1; PFAM: ribosomal protein L1; SPTR: 50S ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast; 50S ribosomal protein L1P complement(159840..160523) Isosphaera pallida ATCC 43644 10154207 YP_004177255.1 CDS Isop_0109 NC_014962.1 160849 161274 R COGs: COG0080 Ribosomal protein L11; InterPro IPR006519: IPR020784: IPR020783: IPR000911; KEGG: tit:Thit_1987 ribosomal protein L11; PFAM: Ribosomal protein L11-like; SMART: ribosomal protein L11; SPTR: 50S ribosomal protein L11; TIGRFAM: ribosomal protein L11; PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11; 50S ribosomal protein L11 complement(160849..161274) Isosphaera pallida ATCC 43644 10154208 YP_004177256.1 CDS Isop_0110 NC_014962.1 161525 162382 R COGs: COG0250 Transcription antiterminator; InterPro IPR001062: IPR006645: IPR005824; KEGG: plm:Plim_0438 transcription termination/antitermination factor NusG; PFAM: NGN domain-containing protein; KOW domain protein; SMART: NGN domain-containing protein; KOW domain protein; SPTR: Transcription antitermination protein nusG; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG; NusG antitermination factor complement(161525..162382) Isosphaera pallida ATCC 43644 10154209 YP_004177257.1 CDS Isop_0111 NC_014962.1 162490 162993 R InterPro IPR005807: IPR001901; KEGG: rba:RB7897 SecE protein; PFAM: protein secE/sec61-gamma protein; SPTR: Putative uncharacterized protein secE; TIGRFAM: preprotein translocase, SecE subunit; PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial; preprotein translocase subunit SecE complement(162490..162993) Isosphaera pallida ATCC 43644 10154210 YP_004177258.1 CDS Isop_0112 NC_014962.1 163542 163694 R InterPro IPR001705; KEGG: plm:Plim_0436 ribosomal protein L33; PFAM: ribosomal protein L33; SPTR: 50S ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type; 50S ribosomal protein L33 complement(163542..163694) Isosphaera pallida ATCC 43644 10154212 YP_004177259.1 CDS Isop_0113 NC_014962.1 164041 165261 R COGs: COG0050 GTPase - translation elongation factors; InterProIPR004541: IPR005225: IPR000795: IPR004161: IPR 004160; KEGG: rba:RB7894 elongation factor Tu; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain-containing protein; SPTR: Elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; manually curated; PFAM: Elongation factor Tu C-terminal domain; Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU; translation elongation factor 1A (EF-1A/EF-Tu) complement(164041..165261) Isosphaera pallida ATCC 43644 10154213 YP_004177260.1 CDS Isop_0114 NC_014962.1 166507 167427 D KEGG: ptr:473093 similar to Gene model 996, (NCBI); SPTR: Putative uncharacterized protein; hypothetical protein 166507..167427 Isosphaera pallida ATCC 43644 10154218 YP_004177261.1 CDS Isop_0115 NC_014962.1 167863 169023 D COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: phe:Phep_3646 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Putative uncharacterized protein; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase domain-containing protein 167863..169023 Isosphaera pallida ATCC 43644 10154219 YP_004177262.1 CDS Isop_0116 NC_014962.1 169568 170158 D COGs: COG4961 Flp pilus assembly protein TadG; InterPro IPR012495; KEGG: pca:Pcar_1749 Flp pilus assembly protein TadG; PFAM: TadE family protein; SPTR: Flp pilus assembly protein TadG; PFAM: TadE-like protein; TadE family protein 169568..170158 Isosphaera pallida ATCC 43644 10154220 YP_004177263.1 CDS Isop_0117 NC_014962.1 170265 170756 D InterPro IPR012495; KEGG: ctt:CtCNB1_2097 TadE-like protein; PFAM: TadE family protein; SPTR: TadE family protein; PFAM: TadE-like protein; TadE family protein 170265..170756 Isosphaera pallida ATCC 43644 10154221 YP_004177264.1 CDS Isop_0118 NC_014962.1 171258 174200 D KEGG: psl:Psta_0521 von Willebrand factor type A; SPTR: von Willebrand factor type A; hypothetical protein 171258..174200 Isosphaera pallida ATCC 43644 10154222 YP_004177265.1 CDS Isop_0119 NC_014962.1 174372 175220 D COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: sru:SRU_1197 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter, ATP-binding protein; PFAM: ABC transporter; ABC transporter-like protein 174372..175220 Isosphaera pallida ATCC 43644 10154223 YP_004177266.1 CDS Isop_0120 NC_014962.1 175339 176601 D KEGG: psl:Psta_0817 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 175339..176601 Isosphaera pallida ATCC 43644 10154224 YP_004177267.1 CDS Isop_0121 NC_014962.1 176639 177799 R COGs: COG2170 conserved hypothetical protein; InterPro IPR011793: IPR006336; KEGG: gvi:gll2294 hypothetical protein; PFAM: glutamate--cysteine ligase GCS2; SPTR: Carboxylate-amine ligase PM8797T_05430; PFAM: Glutamate-cysteine ligase family 2(GCS2); TIGRFAM: uncharacterized enzyme; glutamate--cysteine ligase complement(176639..177799) Isosphaera pallida ATCC 43644 10154225 YP_004177268.1 CDS Isop_0122 NC_014962.1 177796 179160 R COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR017439: IPR010168: IPR002933: IPR011650; KEGG: rba:RB4484 IAA-amino acid hydrolase 1; PFAM: peptidase M20; peptidase dimerisation domain protein; PRIAM: N-acetyldiaminopimelate deacetylase; SPTR: IAA-amino acid hydrolase 1; TIGRFAM: amidohydrolase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; amidohydrolase complement(177796..179160) Isosphaera pallida ATCC 43644 10154226 YP_004177269.1 CDS Isop_0123 NC_014962.1 179373 182606 R COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016160: IPR002872: IPR015590; KEGG: psl:Psta_0870 delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde Dehydrogenase; Proline dehydrogenase; SPTR: 1-pyrroline-5 carboxylate dehydrogenase; PFAM: Proline dehydrogenase; Aldehyde dehydrogenase family; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative; aldehyde dehydrogenase complement(179373..182606) Isosphaera pallida ATCC 43644 10154227 YP_004177270.1 CDS Isop_0124 NC_014962.1 182910 189527 R COGs: COG2931 RTX toxins and related Ca2+-binding protein; InterPro IPR018512: IPR018511: IPR001343; KEGG: swp:swp_1383 hemolysin-type calcium-binding region; SPTR: Type I secretion target repeat protein; PFAM: Hemolysin-type calcium-binding repeat (2 copies); hypothetical protein complement(182910..189527) Isosphaera pallida ATCC 43644 10154228 YP_004177271.1 CDS Isop_0125 NC_014962.1 190037 191383 R InterPro IPR019734: IPR013026: IPR001440; KEGG: cyb:CYB_1571 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Tetratricopeptide repeat protein; hypothetical protein complement(190037..191383) Isosphaera pallida ATCC 43644 10154229 YP_004177272.1 CDS Isop_0126 NC_014962.1 191669 192781 R InterPro IPR012902: IPR001120; KEGG: plm:Plim_0377 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein complement(191669..192781) Isosphaera pallida ATCC 43644 10154230 YP_004177273.1 CDS Isop_0127 NC_014962.1 193916 194710 D KEGG: tth:TT_P0178 hemin transport system permease protein HmuU; SPTR: Hemin transport system permease protein hmuU; hypothetical protein 193916..194710 Isosphaera pallida ATCC 43644 10154231 YP_004177274.1 CDS Isop_0128 NC_014962.1 194950 195633 D InterPro IPR000866; KEGG: sus:Acid_3880 redoxin domain-containing protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Peroxiredoxin-like protein; PFAM: AhpC/TSA family; alkyl hydroperoxide reductase 194950..195633 Isosphaera pallida ATCC 43644 10154232 YP_004177275.1 CDS Isop_0129 NC_014962.1 195692 197029 D COGs: COG0128 5-enolpyruvylshikimate-3-phosphate synthase; InterPro IPR016228: IPR006264: IPR001986; KEGG: psl:Psta_2422 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); PRIAM: 3-phosphoshikimate 1-carboxyvinyltransferase; SPTR: 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; 3-phosphoshikimate 1-carboxyvinyltransferase 195692..197029 Isosphaera pallida ATCC 43644 10154233 YP_004177276.1 CDS Isop_0130 NC_014962.1 197133 197732 D COGs: COG0792 endonuclease distantly related to Holliday junction resolvase; InterPro IPR003509; KEGG: psl:Psta_2264 protein of unknown function UPF0102; PFAM: Uncharacterised protein family UPF0102; SPTR: UPF0102 protein PM8797T_28449; PFAM: Uncharacterised protein family UPF0102; TIGRFAM: conserved hypothetical protein TIGR00252; hypothetical protein 197133..197732 Isosphaera pallida ATCC 43644 10154234 YP_004177277.1 CDS Isop_0131 NC_014962.1 198135 199280 D COGs: COG0794 sugar phosphate isomerase involved in capsule formation; InterPro IPR000644: IPR004800: IPR018506: IPR001347; KEGG: psl:Psta_0845 KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein; PRIAM: Arabinose-5-phosphate isomerase; SPTR: KpsF/GutQ family protein; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein; KpsF/GutQ family protein 198135..199280 Isosphaera pallida ATCC 43644 10154235 YP_004177278.1 CDS Isop_0132 NC_014962.1 199277 199852 D COGs: COG1778 Low specificity phosphatase (HAD superfamily); InterPro IPR010023: IPR006549; KEGG: psl:Psta_0844 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; PRIAM: 3-deoxy-manno-octulosonate-8-phosphatase; SPTR: Phosphatase kdsC; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; hydrolase, HAD-superfamily, subfamily IIIA; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; HAD-superfamily hydrolase, subfamily IIIA; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 199277..199852 Isosphaera pallida ATCC 43644 10154236 YP_004177279.1 CDS Isop_0133 NC_014962.1 200234 204325 D KEGG: plm:Plim_3739 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 200234..204325 Isosphaera pallida ATCC 43644 10154237 YP_004177280.1 CDS Isop_0134 NC_014962.1 204712 204900 D InterPro IPR007047; KEGG: psl:Psta_2071 Flp/Fap pilin component; PFAM: Flp/Fap pilin component; SPTR: Flp/Fap pilin component; PFAM: Flp/Fap pilin component; Flp/Fap pilin component 204712..204900 Isosphaera pallida ATCC 43644 10154238 YP_004177281.1 CDS Isop_0135 NC_014962.1 205398 206207 D InterPro IPR000045; KEGG: plm:Plim_0796 peptidase A24A prepilin type IV; PFAM: peptidase A24A prepilin type IV; SPTR: Peptidase A24A prepilin type IV; PFAM: Type IV leader peptidase family; peptidase A24A prepilin type IV 205398..206207 Isosphaera pallida ATCC 43644 10154239 YP_004177282.1 CDS Isop_0136 NC_014962.1 206448 207758 D COGs: COG3745 Flp pilus assembly protein CpaB; InterPro IPR017592; KEGG: bbt:BBta_7030 putative pilus assembly protein, CpaB; SPTR: Putative pilus assembly protein, cpaB; TIGRFAM: Flp pilus assembly protein CpaB; TIGRFAM: Flp pilus assembly protein CpaB; Flp pilus assembly protein CpaB 206448..207758 Isosphaera pallida ATCC 43644 10154240 YP_004177283.1 CDS Isop_0137 NC_014962.1 208304 209527 D COGs: COG4963 Flp pilus assembly protein ATPase CpaE; KEGG: plm:Plim_0793 response regulator receiver; SPTR: Response regulator receiver protein; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; response regulator receiver 208304..209527 Isosphaera pallida ATCC 43644 10154241 YP_004177284.1 CDS Isop_0138 NC_014962.1 209772 211355 D COGs: COG4962 Flp pilus assembly protein ATPase CpaF; InterPro IPR017975: IPR001482; KEGG: plm:Plim_1918 type II secretion system protein E; PFAM: type II secretion system protein E; SPTR: Type II secretion system protein E; PFAM: Type II/IV secretion system protein; type II secretion system protein E 209772..211355 Isosphaera pallida ATCC 43644 10154242 YP_004177285.1 CDS Isop_0139 NC_014962.1 211650 212645 D COGs: COG4965 Flp pilus assembly protein TadB; InterPro IPR018076; KEGG: rba:RB5941 secretion system protein TadB; PFAM: Type II secretion system F domain; SPTR: Secretion system protein TadB; PFAM: Bacterial type II secretion system protein F domain; type II secretion system F domain-containing protein 211650..212645 Isosphaera pallida ATCC 43644 10154243 YP_004177286.1 CDS Isop_0140 NC_014962.1 212749 213705 D COGs: COG2064 Flp pilus assembly protein TadC; InterPro IPR018076; KEGG: plm:Plim_1916 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: Type II secretion system protein; PFAM: Bacterial type II secretion system protein F domain; type II secretion system F domain-containing protein 212749..213705 Isosphaera pallida ATCC 43644 10154244 YP_004177287.1 CDS Isop_0141 NC_014962.1 213750 214103 D KEGG: eat:EAT1b_1475 arginine/ornithine antiporter; SPTR: Putative uncharacterized protein; hypothetical protein 213750..214103 Isosphaera pallida ATCC 43644 10154245 YP_004177288.1 CDS Isop_0142 NC_014962.1 214310 215002 R KEGG: gga:423772 similar to KIAA0592 protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(214310..215002) Isosphaera pallida ATCC 43644 10154246 YP_004177289.1 CDS Isop_0143 NC_014962.1 215831 216499 D COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR014284: IPR018247: IPR000838: IPR007627: IPR 013249; KEGG: sth:STH2677 RNA polymerase ECF-type sigma factor; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; ECF subfamily RNA polymerase sigma-24 factor 215831..216499 Isosphaera pallida ATCC 43644 10154247 YP_004177290.1 CDS Isop_0144 NC_014962.1 216612 217310 D KEGG: hoh:Hoch_3681 serine/threonine protein kinase; SPTR: Serine/threonine protein kinase; hypothetical protein 216612..217310 Isosphaera pallida ATCC 43644 10154248 YP_004177291.1 CDS Isop_0145 NC_014962.1 217304 218200 D KEGG: rle:RL3065 hypothetical protein; SPTR: Fork head transcription factor 1; hypothetical protein 217304..218200 Isosphaera pallida ATCC 43644 10154249 YP_004177292.1 CDS Isop_0146 NC_014962.1 218315 219643 R COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001940: IPR001254; KEGG: plm:Plim_3737 peptidase S1 and S6 chymotrypsin/Hap; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SPTR: 2-alkenal reductase; PFAM: Trypsin; peptidase S1 and S6 chymotrypsin/Hap complement(218315..219643) Isosphaera pallida ATCC 43644 10154250 YP_004177293.1 CDS Isop_0147 NC_014962.1 220286 223969 R COGs: COG2133 Glucose/sorbosone dehydrogenase; InterPro IPR009056: IPR013428: IPR013427; KEGG: sli:Slin_5811 membrane-bound dehydrogenase domain protein; SPTR: Membrane-bound dehydrogenase domain protein; TIGRFAM: membrane-bound dehydrogenase domain protein; heme-binding protein; PFAM: Cytochrome c; HEAT repeat; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type; membrane-bound dehydrogenase domain-containing protein complement(220286..223969) Isosphaera pallida ATCC 43644 10154251 YP_004177294.1 CDS Isop_0148 NC_014962.1 224387 225214 R COGs: COG0101 Pseudouridylate synthase; InterPro IPR001406: IPR020097; KEGG: psl:Psta_4219 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; PRIAM: tRNA-pseudouridine synthase I; SPTR: tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I; tRNA pseudouridine synthase A complement(224387..225214) Isosphaera pallida ATCC 43644 10154252 YP_004177295.1 CDS Isop_0149 NC_014962.1 225331 226344 R COGs: COG0136 Aspartate-semialdehyde dehydrogenase; InterProIPR012080: IPR005986: IPR000319: IPR000534: IPR 012280; KEGG: dma:DMR_16050 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding; PRIAM: Aspartate-semialdehyde dehydrogenase; SPTR: Aspartate-semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms); aspartate semialdehyde dehydrogenase complement(225331..226344) Isosphaera pallida ATCC 43644 10154253 YP_004177296.1 CDS Isop_0150 NC_014962.1 226602 228257 D COGs: COG0661 unusual protein kinase; InterPro IPR004147; KEGG: cvi:CV_2967 ubiquinone biosynthesis protein; PFAM: ABC-1 domain-containing protein; SPTR: Probable ubiquinone biosynthesis protein; PFAM: ABC1 family; ABC-1 domain-containing protein 226602..228257 Isosphaera pallida ATCC 43644 10154254 YP_004177297.1 CDS Isop_0151 NC_014962.1 228291 229253 R COGs: COG1767 Triphosphoribosyl-dephospho-CoA synthetase; InterPro IPR002736; KEGG: psl:Psta_4265 triphosphoribosyl-dephospho-CoA protein; PFAM: triphosphoribosyl-dephospho-CoA protein; SPTR: Triphosphoribosyl-dephospho-CoA protein; PFAM: ATP:dephospho-CoA triphosphoribosyl transferase; triphosphoribosyl-dephospho-CoA protein complement(228291..229253) Isosphaera pallida ATCC 43644 10154255 YP_004177298.1 CDS Isop_0152 NC_014962.1 229294 230241 R COGs: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); InterPro IPR011761: IPR004666: IPR013651; KEGG: psl:Psta_3185 alpha-L-glutamate ligase, RimK family; PFAM: RimK domain protein ATP-grasp; SPTR: Probable ribosomal protein S6 modification protein; TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family; alpha-L-glutamate ligase complement(229294..230241) Isosphaera pallida ATCC 43644 10154256 YP_004177299.1 CDS Isop_0153 NC_014962.1 230238 233240 R COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017441: IPR008271: IPR017442: IPR 020635: IPR002290; KEGG: psl:Psta_1107 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain; serine/threonine protein kinase complement(230238..233240) Isosphaera pallida ATCC 43644 10154257 YP_004177300.1 CDS Isop_0154 NC_014962.1 233460 233951 D COGs: COG2947 conserved hypothetical protein; InterPro IPR002740; KEGG: tel:tlr0743 hypothetical protein; PFAM: protein of unknown function DUF55; SPTR: Tlr0743 protein; PFAM: Protein of unknown function DUF55; hypothetical protein 233460..233951 Isosphaera pallida ATCC 43644 10154258 YP_004177301.1 CDS Isop_0155 NC_014962.1 234089 234559 R KEGG: plm:Plim_2797 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(234089..234559) Isosphaera pallida ATCC 43644 10154259 YP_004177302.1 CDS Isop_0156 NC_014962.1 235572 236213 R InterPro IPR007267; KEGG: sat:SYN_02391 cell wall biogenesis glycosyltransferase; PFAM: GtrA family protein; SPTR: Glycosyltransferase involved in cell wall biogenesis; PFAM: GtrA-like protein; GtrA family protein complement(235572..236213) Isosphaera pallida ATCC 43644 10154260 YP_004177303.1 CDS Isop_0157 NC_014962.1 236357 237562 R COGs: COG0482 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain; InterPro IPR004506; KEGG: plm:Plim_4028 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; SPTR: tRNA-specific 2-thiouridylase mnmA; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase complement(236357..237562) Isosphaera pallida ATCC 43644 10154261 YP_004177304.1 CDS Isop_0158 NC_014962.1 237916 238899 D KEGG: sro:Sros_1356 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: CDP-alcohol phosphatidyltransferase; hypothetical protein 237916..238899 Isosphaera pallida ATCC 43644 10154262 YP_004177305.1 CDS Isop_0159 NC_014962.1 238847 239902 R COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR006140: IPR006139; KEGG: aco:Amico_1309 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; PRIAM: Phosphoglycerate dehydrogenase; SPTR: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; phosphoglycerate dehydrogenase complement(238847..239902) Isosphaera pallida ATCC 43644 10154263 YP_004177306.1 CDS Isop_0160 NC_014962.1 239985 240803 R KEGG: sco:SCO4215 GntR family regulatory protein; SPTR: Sec-independent protein translocase TatC; hypothetical protein complement(239985..240803) Isosphaera pallida ATCC 43644 10154264 YP_004177307.1 CDS Isop_0161 NC_014962.1 241166 241462 R KEGG: cpi:Cpin_1010 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(241166..241462) Isosphaera pallida ATCC 43644 10154265 YP_004177308.1 CDS Isop_0162 NC_014962.1 241710 242504 D COGs: COG2071 glutamine amidotransferase; InterPro IPR017926: IPR011697; KEGG: gau:GAU_1361 glutamine amidotransferase class-I family protein; PFAM: peptidase C26; SPTR: Glutamine amidotransferase class-I family protein; PFAM: Peptidase C26; peptidase C26 241710..242504 Isosphaera pallida ATCC 43644 10154266 YP_004177309.1 CDS Isop_0163 NC_014962.1 242645 243835 R InterPro IPR011467; KEGG: rba:RB1699 signal peptide; PFAM: protein of unknown function DUF1573; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1573); hypothetical protein complement(242645..243835) Isosphaera pallida ATCC 43644 10154267 YP_004177310.1 CDS Isop_0164 NC_014962.1 244225 244755 D COGs: COG5405 ATP-dependent protease HslVU (ClpYQ) peptidase subunit; InterPro IPR001353; KEGG: dhd:Dhaf_3713 ATP-dependent protease peptidase subunit; PFAM: 20S proteasome A and B subunits; SPTR: ATP-dependent protease peptidase subunit; manually curated; PFAM: Proteasome subunit; TIGRFAM: ATP-dependent protease HslVU, peptidase subunit; ATP dependent peptidase subunit CodW 244225..244755 Isosphaera pallida ATCC 43644 10154268 YP_004177311.1 CDS Isop_0165 NC_014962.1 244752 246377 D COGs: COG1220 ATP-dependent protease HslVU (ClpYQ) ATPase subunit; InterPro IPR004491: IPR013093: IPR003593; KEGG: adg:Adeg_0577 ATP-dependent protease ATP-binding subunit HslU; PFAM: ATPase AAA-2 domain protein; SMART: AAA ATPase; SPTR: ATP-dependent protease ATPase subunit HslU; TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; TIGRFAM: ATP-dependent protease HslVU, ATPase subunit; heat shock protein HslVU, ATPase subunit HslU 244752..246377 Isosphaera pallida ATCC 43644 10154269 YP_004177312.1 CDS Isop_0166 NC_014962.1 246624 247184 D KEGG: ppa:PAS_chr2-1_0824 hypothetical protein; SPTR: GATA zinc finger domain-containing protein 1; hypothetical protein 246624..247184 Isosphaera pallida ATCC 43644 10154270 YP_004177313.1 CDS Isop_0167 NC_014962.1 247445 247678 D KEGG: dpe:Dper_GL15605 GL15605 gene product from transcript GL15605-RA; SPTR: GL15605; hypothetical protein 247445..247678 Isosphaera pallida ATCC 43644 10154271 YP_004177314.1 CDS Isop_0168 NC_014962.1 247844 249919 D COGs: COG0072 Phenylalanyl-tRNA synthetase beta subunit; InterPro IPR005121: IPR004532: IPR005146: IPR005147; KEGG: rba:RB7112 phenylalanyl-tRNA synthetase beta chain; PFAM: B3/4 domain protein; tRNA synthetase B5; ferredoxin-fold anticodon-binding; SPTR: Phenylalanyl-tRNA synthetase beta chain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial; phenylalanyl-tRNA synthetase subunit beta 247844..249919 Isosphaera pallida ATCC 43644 10154272 YP_004177315.1 CDS Isop_0169 NC_014962.1 249999 251255 R COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sti:Sthe_0904 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase complement(249999..251255) Isosphaera pallida ATCC 43644 10154273 YP_004177316.1 CDS Isop_0170 NC_014962.1 251382 251882 D InterPro IPR004360; KEGG: bpy:Bphyt_1430 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; glyoxalase/bleomycin resistance protein/dioxygenase 251382..251882 Isosphaera pallida ATCC 43644 10154274 YP_004177317.1 CDS Isop_0171 NC_014962.1 252212 253990 D KEGG: rba:RB5189 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 252212..253990 Isosphaera pallida ATCC 43644 10154275 YP_004177318.1 CDS Isop_0172 NC_014962.1 254133 255473 D COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: psl:Psta_3646 sulfatase; PFAM: sulfatase; SPTR: Sulfatase; PFAM: Sulfatase; sulfatase 254133..255473 Isosphaera pallida ATCC 43644 10154276 YP_004177319.1 CDS Isop_0173 NC_014962.1 255581 256465 D COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR004838: IPR013216; KEGG: bcv:Bcav_2198 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: Methyltransferase domain; type 11 methyltransferase 255581..256465 Isosphaera pallida ATCC 43644 10154277 YP_004177320.1 CDS Isop_0174 NC_014962.1 256481 258043 D KEGG: clj:CLJU_c05530 putative polysaccharide biosynthesis protein; SPTR: Membrane protein involved in the export of O-antigen and teichoic acid; hypothetical protein 256481..258043 Isosphaera pallida ATCC 43644 10154278 YP_004177321.1 CDS Isop_0175 NC_014962.1 258040 260049 D InterPro IPR003342; KEGG: psl:Psta_0545 hypothetical protein; PFAM: glycosyl transferase family 39; SPTR: Dolichyl-phosphate-mannose-protein mannosyltransferase protein; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase; glycosyl transferase family protein 258040..260049 Isosphaera pallida ATCC 43644 10154279 YP_004177322.1 CDS Isop_0176 NC_014962.1 260103 261071 D COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway); InterPro IPR002529; KEGG: rme:Rmet_5199 fumarylacetoacetate hydrolase; PFAM: fumarylacetoacetate (FAA) hydrolase; PRIAM: Ureidoglycolate lyase; SPTR: 5-carboxymethyl-2-hydroxymuconate delta-isomerase; PFAM: Fumarylacetoacetate (FAA) hydrolase family; ureidoglycolate lyase 260103..261071 Isosphaera pallida ATCC 43644 10154280 YP_004177323.1 CDS Isop_0177 NC_014962.1 261443 262972 D KEGG: eba:ebA4323 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 261443..262972 Isosphaera pallida ATCC 43644 10154281 YP_004177324.1 CDS Isop_0178 NC_014962.1 262976 264166 D KEGG: eba:ebA4323 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 262976..264166 Isosphaera pallida ATCC 43644 10154282 YP_004177325.1 CDS Isop_0179 NC_014962.1 264163 265422 D KEGG: eba:ebA4323 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 264163..265422 Isosphaera pallida ATCC 43644 10154283 YP_004177326.1 CDS Isop_0180 NC_014962.1 265484 267229 D COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR010071: IPR020845: IPR000873; KEGG: eba:ebA4326 putative acyl-CoA synthetase; PFAM: AMP-dependent synthetase and ligase; SPTR: Putative acyl-CoA synthetase; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-binding enzyme; TIGRFAM: amino acid adenylation domain; amino acid adenylation domain-containing protein 265484..267229 Isosphaera pallida ATCC 43644 10154284 YP_004177327.1 CDS Isop_0181 NC_014962.1 267275 268594 D COGs: COG1560 Lauroyl/myristoyl acyltransferase; KEGG: aeh:Mlg_2805 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; SPTR: Lipid A biosynthesis acyltransferase; PFAM: Bacterial lipid A biosynthesis acyltransferase; hypothetical protein 267275..268594 Isosphaera pallida ATCC 43644 10154285 YP_004177328.1 CDS Isop_0182 NC_014962.1 268668 269582 R KEGG: rba:RB9030 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(268668..269582) Isosphaera pallida ATCC 43644 10154286 YP_004177329.1 CDS Isop_0183 NC_014962.1 270100 272289 D COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR011659; KEGG: mxa:MXAN_6601 S9C family peptidase; PFAM: WD40-like beta Propeller containing protein; SPTR: Prolyl oligopeptidase family protein; PFAM: Prolyl oligopeptidase family; WD40-like Beta Propeller Repeat; WD40-like beta Propeller containing protein 270100..272289 Isosphaera pallida ATCC 43644 10154287 YP_004177330.1 CDS Isop_0184 NC_014962.1 272455 273021 D KEGG: psl:Psta_2531 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: DinB family; hypothetical protein 272455..273021 Isosphaera pallida ATCC 43644 10154288 YP_004177331.1 CDS Isop_0185 NC_014962.1 273146 275254 D COGs: COG1686 D-alanyl-D-alanine carboxypeptidase; InterPro IPR018044: IPR001466: IPR002477: IPR001967; KEGG: psl:Psta_1647 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Peptidoglycan-binding domain 1 protein; beta-lactamase; SPTR: Peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; PFAM: Putative peptidoglycan binding domain; D-alanyl-D-alanine carboxypeptidase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 273146..275254 Isosphaera pallida ATCC 43644 10154289 YP_004177332.1 CDS Isop_0186 NC_014962.1 275424 277058 D COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006236: IPR006140: IPR006139: IPR002912; KEGG: plm:Plim_2827 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein; PRIAM: Phosphoglycerate dehydrogenase; SPTR: D-3-phosphoglycerate dehydrogenase; TIGRFAM: D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; ACT domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; TIGRFAM: D-3-phosphoglycerate dehydrogenase; D-3-phosphoglycerate dehydrogenase 275424..277058 Isosphaera pallida ATCC 43644 10154290 YP_004177333.1 CDS Isop_0187 NC_014962.1 277123 278682 R COGs: COG1570 Exonuclease VII large subunit; InterPro IPR003753: IPR004365: IPR020579; KEGG: plm:Plim_0430 exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit-like; nucleic acid binding OB-fold tRNA/helicase-type; PRIAM: Exodeoxyribonuclease VII; SPTR: Exodeoxyribonuclease 7 large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit; OB-fold nucleic acid binding domain; TIGRFAM: exodeoxyribonuclease VII, large subunit; exodeoxyribonuclease VII large subunit complement(277123..278682) Isosphaera pallida ATCC 43644 10154291 YP_004177334.1 CDS Isop_0188 NC_014962.1 278764 279810 R KEGG: cpv:cgd1_590 hypothetical protein; SPTR: Subtilisin, putative; hypothetical protein complement(278764..279810) Isosphaera pallida ATCC 43644 10154292 YP_004177335.1 CDS Isop_0189 NC_014962.1 280285 280932 D COGs: COG0317 Guanosine polyphosphate pyrophosphohydrolase/synthetase; InterPro IPR006674; KEGG: cfa:488744 HD domain containing 3; PFAM: metal-dependent phosphohydrolase HD sub domain; SPTR: HD domain protein; metal dependent phosphohydrolase 280285..280932 Isosphaera pallida ATCC 43644 10154293 YP_004177336.1 CDS Isop_0190 NC_014962.1 281320 283191 R KEGG: dal:Dalk_2888 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(281320..283191) Isosphaera pallida ATCC 43644 10154294 YP_004177337.1 CDS Isop_0191 NC_014962.1 283478 284488 D KEGG: xcb:XC_0878 protein kinases, catalytic domain; region: PKc_like; cl09925; SPTR: Putative uncharacterized protein; hypothetical protein 283478..284488 Isosphaera pallida ATCC 43644 10154295 YP_004177338.1 CDS Isop_0192 NC_014962.1 284482 285291 R COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR017871: IPR003593; KEGG: gau:GAU_0826 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative ABC transporter ATP-binding protein; PFAM: ABC transporter; ABC transporter-like protein complement(284482..285291) Isosphaera pallida ATCC 43644 10154296 YP_004177339.1 CDS Isop_0193 NC_014962.1 285288 286331 R KEGG: afo:Afer_1728 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; SPTR: Putative uncharacterized protein; hypothetical protein complement(285288..286331) Isosphaera pallida ATCC 43644 10154297 YP_004177340.1 CDS Isop_0194 NC_014962.1 286707 287909 D COGs: COG0820 Fe-S-cluster redox enzyme; InterPro IPR004383: IPR007197; KEGG: plm:Plim_2783 radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; SPTR: Ribosomal RNA large subunit methyltransferase N; TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM enzyme, Cfr family; 23S rRNA m(2)A-2503 methyltransferase 286707..287909 Isosphaera pallida ATCC 43644 10154298 YP_004177341.1 CDS Isop_0195 NC_014962.1 288093 288833 D COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284: IPR007627: IPR013249; KEGG: psl:Psta_1783 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; ECF subfamily RNA polymerase sigma-24 factor 288093..288833 Isosphaera pallida ATCC 43644 10154299 YP_004177342.1 CDS Isop_0196 NC_014962.1 288855 289757 D COGs: COG1040 amidophosphoribosyltransferase; InterPro IPR000836; KEGG: cja:CJA_0425 competence protein ComF; PFAM: phosphoribosyltransferase; SPTR: Phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein; phosphoribosyltransferase 288855..289757 Isosphaera pallida ATCC 43644 10154300 YP_004177343.1 CDS Isop_0197 NC_014962.1 289890 290888 D COGs: COG0181 Porphobilinogen deaminase; InterPro IPR000860; KEGG: psl:Psta_2360 porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; SPTR: Porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase; hydroxymethylbilane synthase 289890..290888 Isosphaera pallida ATCC 43644 10154301 YP_004177344.1 CDS Isop_0198 NC_014962.1 291043 292218 R COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR001176: IPR004838: IPR004839; KEGG: ttr:Tter_0434 aminotransferase class I and II; PFAM: aminotransferase class I and II; SPTR: Aminotransferase class I and II; PFAM: Aminotransferase class I and II; class I/II aminotransferase complement(291043..292218) Isosphaera pallida ATCC 43644 10154302 YP_004177345.1 CDS Isop_0199 NC_014962.1 292551 294788 D KEGG: mbr:MONBRDRAFT_8053 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 292551..294788 Isosphaera pallida ATCC 43644 10154303 YP_004177346.1 CDS Isop_0200 NC_014962.1 295248 295613 R KEGG: dre:445226 zgc:100957; SPTR: Putative uncharacterized protein; hypothetical protein complement(295248..295613) Isosphaera pallida ATCC 43644 10154304 YP_004177347.1 CDS Isop_0201 NC_014962.1 296128 297177 R COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: ttr:Tter_1808 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase domain-containing protein complement(296128..297177) Isosphaera pallida ATCC 43644 10154305 YP_004177348.1 CDS Isop_0202 NC_014962.1 297348 299138 R KEGG: plm:Plim_3249 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(297348..299138) Isosphaera pallida ATCC 43644 10154306 YP_004177349.1 CDS Isop_0203 NC_014962.1 299473 301728 D COGs: COG4099 peptidase; InterPro IPR001330: IPR010496: IPR003140; KEGG: plm:Plim_2385 protein of unknown function DUF1080; PFAM: protein of unknown function DUF1080; Prenyltransferase/squalene oxidase; phospholipase/Carboxylesterase; SPTR: Putative uncharacterized protein; PFAM: Prenyltransferase and squalene oxidase repeat; Domain of Unknown Function (DUF1080); Putative esterase; hypothetical protein 299473..301728 Isosphaera pallida ATCC 43644 10154307 YP_004177350.1 CDS Isop_0204 NC_014962.1 301851 302330 D KEGG: mac:MA3428 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 301851..302330 Isosphaera pallida ATCC 43644 10154308 YP_004177351.1 CDS Isop_0205 NC_014962.1 302447 302575 R hypothetical protein complement(302447..302575) Isosphaera pallida ATCC 43644 10154309 YP_004177352.1 CDS Isop_0206 NC_014962.1 302722 304203 D KEGG: cag:Cagg_3809 protein of unknown function DUF88; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF88; hypothetical protein 302722..304203 Isosphaera pallida ATCC 43644 10154310 YP_004177353.1 CDS Isop_0207 NC_014962.1 304337 304540 R KEGG: tva:TVAG_332710 hypothetical protein; hypothetical protein complement(304337..304540) Isosphaera pallida ATCC 43644 10154311 YP_004177354.1 CDS Isop_0208 NC_014962.1 304620 305588 D COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: psl:Psta_1182 protein of unknown function DUF323; PFAM: protein of unknown function DUF323; SPTR: Putative uncharacterized protein; PFAM: Formylglycine-generating sulfatase enzyme; hypothetical protein 304620..305588 Isosphaera pallida ATCC 43644 10154312 YP_004177355.1 CDS Isop_0209 NC_014962.1 305849 307006 R COGs: COG0075 Serine-pyruvate aminotransferase/ aspartate aminotransferase; InterPro IPR000111: IPR020578: IPR000192; KEGG: ddf:DEFDS_2124 serine--glyoxylate transaminase; PFAM: aminotransferase class V; SPTR: Serine--glyoxylate transaminase; PFAM: Aminotransferase class-V; class V aminotransferase complement(305849..307006) Isosphaera pallida ATCC 43644 10154313 YP_004177356.1 CDS Isop_0210 NC_014962.1 307334 307780 R COGs: COG0139 Phosphoribosyl-AMP cyclohydrolase; InterPro IPR002496; KEGG: dde:Dde_3567 phosphoribosyl-AMP cyclohydrolase; PFAM: phosphoribosyl-AMP cyclohydrolase; PRIAM: Phosphoribosyl-AMP cyclohydrolase; SPTR: Phosphoribosyl-AMP cyclohydrolase; PFAM: Phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-AMP cyclohydrolase complement(307334..307780) Isosphaera pallida ATCC 43644 10154314 YP_004177357.1 CDS Isop_0211 NC_014962.1 307777 309150 R InterPro IPR013026; KEGG: afw:Anae109_3372 TPR repeat-containing protein; SPTR: Tetratricopeptide TPR_2 repeat protein; hypothetical protein complement(307777..309150) Isosphaera pallida ATCC 43644 10154315 YP_004177358.1 CDS Isop_0212 NC_014962.1 309401 311695 R InterPro IPR013026: IPR004027: IPR019734; KEGG: psl:Psta_1877 hypothetical protein; PFAM: SEC-C motif domain protein; SMART: Tetratricopeptide repeat; SPTR: Protein disulfide-isomerase-like protein; PFAM: SEC-C motif; SEC-C motif domain-containing protein complement(309401..311695) Isosphaera pallida ATCC 43644 10154316 YP_004177359.1 CDS Isop_0213 NC_014962.1 311979 313622 R COGs: COG1160 GTPase; InterPro IPR005225: IPR016484: IPR002917; KEGG: psl:Psta_1973 small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; SPTR: GTP-binding protein engA; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein; PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain; ribosome-associated GTPase EngA complement(311979..313622) Isosphaera pallida ATCC 43644 10154317 YP_004177360.1 CDS Isop_0214 NC_014962.1 314116 314757 D KEGG: smd:Smed_5899 protein of unknown function DUF395 YeeE/YedE; SPTR: Putative uncharacterized protein; hypothetical protein 314116..314757 Isosphaera pallida ATCC 43644 10154318 YP_004177361.1 CDS Isop_0215 NC_014962.1 314754 315341 D KEGG: nca:Noca_1392 PAS sensor protein; SPTR: PAS sensor protein; hypothetical protein 314754..315341 Isosphaera pallida ATCC 43644 10154319 YP_004177362.1 CDS Isop_0216 NC_014962.1 315338 316087 D KEGG: xce:Xcel_3000 NLP/P60 protein; SPTR: NLP/P60 protein; hypothetical protein 315338..316087 Isosphaera pallida ATCC 43644 10154320 YP_004177363.1 CDS Isop_0217 NC_014962.1 316356 317495 R COGs: COG0616 Periplasmic serine protease (ClpP class); InterPro IPR004635: IPR002142; KEGG: nde:NIDE2543 putative signal peptide peptidase SppA; PFAM: peptidase S49; SPTR: Signal peptide peptidase SppA, 36K type; TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type; signal peptide peptidase SppA, 36K type complement(316356..317495) Isosphaera pallida ATCC 43644 10154321 YP_004177364.1 CDS Isop_0218 NC_014962.1 317692 318729 D COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: nhl:Nhal_0558 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter; ABC transporter-like protein 317692..318729 Isosphaera pallida ATCC 43644 10154322 YP_004177365.1 CDS Isop_0219 NC_014962.1 318807 320732 R COGs: COG0326 Molecular chaperone HSP90 family; InterPro IPR001404: IPR020575: IPR003594; KEGG: lic:LIC12469 HSP90 family protein; PFAM: ATP-binding region ATPase domain protein; SPTR: HtpG; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; ATP-binding protein complement(318807..320732) Isosphaera pallida ATCC 43644 10154323 YP_004177366.1 CDS Isop_0220 NC_014962.1 320974 324255 R COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467: IPR001789: IPR000014: IPR000700: IPR 004358: IPR013655: IPR003661: IPR003594: IPR001610; KEGG: dma:DMR_33580 two-component hybrid sensor and regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; response regulator receiver; SPTR: Two-component hybrid sensor and regulator; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; PAS/PAC sensor hybrid histidine kinase complement(320974..324255) Isosphaera pallida ATCC 43644 10154324 YP_004177367.1 CDS Isop_0221 NC_014962.1 324912 325874 R COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR019554; KEGG: rba:RB754 polysaccharide export protein; PFAM: Soluble ligand binding domain; SPTR: Wza; PFAM: Polysaccharide biosynthesis/export protein; SLBB domain; Soluble ligand-binding domain-containing protein complement(324912..325874) Isosphaera pallida ATCC 43644 10154325 YP_004177368.1 CDS Isop_0222 NC_014962.1 326343 326600 R KEGG: uma:UM06005.1 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(326343..326600) Isosphaera pallida ATCC 43644 10154326 YP_004177369.1 CDS Isop_0223 NC_014962.1 326732 327295 D KEGG: cre:CHLREDRAFT_196816 glyoxal or galactose oxidase; SPTR: Minus agglutinin; glyoxal or galactose oxidase 326732..327295 Isosphaera pallida ATCC 43644 10154327 YP_004177370.1 CDS Isop_0224 NC_014962.1 327413 327547 D KEGG: pic:PICST_85888 transcription factor which mediates glucose repression; SPTR: Transcription factor which mediates glucose repression; hypothetical protein 327413..327547 Isosphaera pallida ATCC 43644 10154328 YP_004177371.1 CDS Isop_0225 NC_014962.1 327635 328618 D KEGG: oaa:100080472 similar to Src homology 3 domain-containing guanine nucleotide exchange factor; SPTR: Putative uncharacterized protein; hypothetical protein 327635..328618 Isosphaera pallida ATCC 43644 10154329 YP_004177372.1 CDS Isop_0226 NC_014962.1 328986 329453 D KEGG: bcl:ABC1424 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 328986..329453 Isosphaera pallida ATCC 43644 10154330 YP_004177373.1 CDS Isop_0227 NC_014962.1 329577 330614 D COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: plm:Plim_0746 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel; SPTR: MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel family; MotA/TolQ/ExbB proton channel 329577..330614 Isosphaera pallida ATCC 43644 10154331 YP_004177374.1 CDS Isop_0228 NC_014962.1 330696 331172 D COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: psl:Psta_2466 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 330696..331172 Isosphaera pallida ATCC 43644 10154332 YP_004177375.1 CDS Isop_0229 NC_014962.1 331330 332040 D COGs: COG0586 membrane-associated protein; InterPro IPR015414; KEGG: gau:GAU_2047 hypothetical membrane protein; PFAM: SNARE associated Golgi protein; SPTR: Hypothetical membrane protein; PFAM: SNARE associated Golgi protein; hypothetical protein 331330..332040 Isosphaera pallida ATCC 43644 10154333 YP_004177376.1 CDS Isop_0230 NC_014962.1 332078 332839 R COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002347: IPR002198; KEGG: plm:Plim_1577 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(332078..332839) Isosphaera pallida ATCC 43644 10154334 YP_004177377.1 CDS Isop_0231 NC_014962.1 332959 333516 R COGs: COG2096 conserved hypothetical protein; InterPro IPR017858: IPR002779; KEGG: rmr:Rmar_1592 ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; PRIAM: Cob(I)yrinic acid a,c-diamide adenosyltransferase; SPTR: ATP/cobalamin adenosyltransferase; TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: Cobalamin adenosyltransferase; TIGRFAM: ATP:cob(I)alamin adenosyltransferase; ATP:cob(I)alamin adenosyltransferase complement(332959..333516) Isosphaera pallida ATCC 43644 10154335 YP_004177378.1 CDS Isop_0232 NC_014962.1 333804 334901 D COGs: COG0823 Periplasmic component of the Tol biopolymer transport system; InterPro IPR011659; KEGG: psl:Psta_4140 WD40 domain protein beta propeller; PFAM: WD40-like beta Propeller containing protein; SPTR: WD40 domain protein beta Propeller; PFAM: WD40-like Beta Propeller Repeat; WD40-like beta Propeller containing protein 333804..334901 Isosphaera pallida ATCC 43644 10154336 YP_004177379.1 CDS Isop_0233 NC_014962.1 335157 335657 D KEGG: plm:Plim_3923 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF664); hypothetical protein 335157..335657 Isosphaera pallida ATCC 43644 10154337 YP_004177380.1 CDS Isop_0234 NC_014962.1 335700 337811 R COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017441: IPR008271: IPR017442: IPR 020635: IPR002290; KEGG: cya:CYA_2146 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain; serine/threonine protein kinase complement(335700..337811) Isosphaera pallida ATCC 43644 10154338 YP_004177381.1 CDS Isop_0235 NC_014962.1 338074 338958 R InterPro IPR001478; KEGG: ote:Oter_4030 PDZ/DHR/GLGF domain-containing protein; PFAM: PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: PDZ/DHR/GLGF domain protein; PFAM: PDZ domain (Also known as DHR or GLGF); PDZ/DHR/GLGF domain-containing protein complement(338074..338958) Isosphaera pallida ATCC 43644 10154339 YP_004177382.1 CDS Isop_0236 NC_014962.1 338962 339942 R InterPro IPR001478: IPR001969; KEGG: rlt:Rleg2_1589 membrane-associated zinc metalloprotease; PFAM: PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: Membrane-associated zinc metalloprotease; PFAM: PDZ domain (Also known as DHR or GLGF); PDZ/DHR/GLGF domain-containing protein complement(338962..339942) Isosphaera pallida ATCC 43644 10154340 YP_004177383.1 CDS Isop_0237 NC_014962.1 340304 341329 R KEGG: pyo:PY00560 hypothetical protein; SPTR: Putative uncharacterized protein PY00560; manually curated; hypothetical protein complement(340304..341329) Isosphaera pallida ATCC 43644 10154341 YP_004177384.1 CDS Isop_0238 NC_014962.1 341458 341763 R KEGG: sna:Snas_2029 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(341458..341763) Isosphaera pallida ATCC 43644 10154342 YP_004177385.1 CDS Isop_0239 NC_014962.1 342281 342613 R KEGG: der:Dere_GG18161 GG18161 gene product from transcript GG18161-RA; SPTR: GG18161; hypothetical protein complement(342281..342613) Isosphaera pallida ATCC 43644 10154343 YP_004177386.1 CDS Isop_0240 NC_014962.1 342644 344938 D COGs: COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain; InterPro IPR002035: IPR013694: IPR006587; KEGG: psl:Psta_0406 von Willebrand factor type A; PFAM: von Willebrand factor type A; Vault protein inter-alpha-trypsin domain-containing protein; SMART: von Willebrand factor type A; Vault protein inter-alpha-trypsin, metazoa; SPTR: Inter-alpha-trypsin inhibitor family heavy chain-related protein-hypothetical secreted or membrane-associated; PFAM: Vault protein inter-alpha-trypsin; von Willebrand factor type A domain; von Willebrand factor type A 342644..344938 Isosphaera pallida ATCC 43644 10154344 YP_004177387.1 CDS Isop_0241 NC_014962.1 345200 346336 D KEGG: chu:CHU_3727 b-glycosidase, CBM9 module, glycoside hydrolase family 8 protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1083); hypothetical protein 345200..346336 Isosphaera pallida ATCC 43644 10154345 YP_004177388.1 CDS Isop_0242 NC_014962.1 346541 348907 D KEGG: plm:Plim_0217 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 346541..348907 Isosphaera pallida ATCC 43644 10154346 YP_004177389.1 CDS Isop_0243 NC_014962.1 349200 349406 D KEGG: nfi:NFIA_102750 hypothetical protein; SPTR: Predicted protein; PFAM: Lipoprotein Rz1 precursor; hypothetical protein 349200..349406 Isosphaera pallida ATCC 43644 10154347 YP_004177390.1 CDS Isop_0244 NC_014962.1 349729 351366 D InterPro IPR011465; KEGG: cre:CHLREDRAFT_10029 fibrocystin-L-like protein; PFAM: protein of unknown function DUF1571; SPTR: Plus agglutinin; PFAM: Protein of unknown function (DUF1571); hypothetical protein 349729..351366 Isosphaera pallida ATCC 43644 10154348 YP_004177391.1 CDS Isop_0245 NC_014962.1 351585 352055 D COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: psl:Psta_0568 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator-like protein; PFAM: Response regulator receiver domain; response regulator receiver protein 351585..352055 Isosphaera pallida ATCC 43644 10154349 YP_004177392.1 CDS Isop_0246 NC_014962.1 352052 353638 D COGs: COG2215 ABC-type uncharacterized transport system permease component; KEGG: cai:Caci_3988 high-affinity nickel-transporter; SPTR: High-affinity nickel-transporter; PFAM: High-affinity nickel-transport protein; hypothetical protein 352052..353638 Isosphaera pallida ATCC 43644 10154350 YP_004177393.1 CDS Isop_0247 NC_014962.1 353866 354561 D InterPro IPR010496; KEGG: rmr:Rmar_1742 protein of unknown function DUF1080; PFAM: protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF1080); hypothetical protein 353866..354561 Isosphaera pallida ATCC 43644 10154351 YP_004177394.1 CDS Isop_0248 NC_014962.1 354736 355176 D KEGG: srm:SRM_01011 conserved hypothetical protein, secreted; SPTR: Putative uncharacterized protein; hypothetical protein 354736..355176 Isosphaera pallida ATCC 43644 10154352 YP_004177395.1 CDS Isop_0249 NC_014962.1 355313 355816 R COGs: COG0225 Peptide methionine sulfoxide reductase; InterPro IPR002569; KEGG: nmu:Nmul_A2452 methionine sulfoxide reductase A; PFAM: Methionine sulfoxide reductase A; PRIAM: Peptide-methionine (S)-S-oxide reductase; SPTR: Peptide methionine sulfoxide reductase msrA; TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; peptide methionine sulfoxide reductase complement(355313..355816) Isosphaera pallida ATCC 43644 10154353 YP_004177396.1 CDS Isop_0250 NC_014962.1 355987 357363 R KEGG: cag:Cagg_0419 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2088); hypothetical protein complement(355987..357363) Isosphaera pallida ATCC 43644 10154354 YP_004177397.1 CDS Isop_0251 NC_014962.1 357484 358380 R InterPro IPR013424; KEGG: bja:blr0478 hypothetical protein; SPTR: Conserved repeat domain protein; TIGRFAM: PEP-CTERM putative exosortase interaction domain; hypothetical protein complement(357484..358380) Isosphaera pallida ATCC 43644 10154355 YP_004177398.1 CDS Isop_0252 NC_014962.1 359207 359605 D COGs: COG1869 ABC-type ribose transport system auxiliary component; InterPro IPR007721; KEGG: gct:GC56T3_3248 RbsD or FucU transport; PFAM: RbsD or FucU transport; SPTR: Putative uncharacterized protein; PFAM: RbsD / FucU transport protein family; transport protein RbsD/FucU 359207..359605 Isosphaera pallida ATCC 43644 10154356 YP_004177399.1 CDS Isop_0253 NC_014962.1 359757 360452 R KEGG: dia:Dtpsy_3135 primosomal protein N'; SPTR: Putative DNA internalization-related competence protein ComEC/Rec2; hypothetical protein complement(359757..360452) Isosphaera pallida ATCC 43644 10154357 YP_004177400.1 CDS Isop_0254 NC_014962.1 360621 360878 R KEGG: tcr:510625.10 dispersed gene family protein 1 (DGF-1); SPTR: Dispersed gene family protein 1 (DGF-1), putative; dispersed gene family protein 1 (DGF-1) complement(360621..360878) Isosphaera pallida ATCC 43644 10154358 YP_004177401.1 CDS Isop_0255 NC_014962.1 361029 362072 R COGs: COG2267 Lysophospholipase; InterPro IPR000073; KEGG: rba:RB10853 lysophospholipase; PFAM: alpha/beta hydrolase fold; SPTR: Probable lysophospholipase; PFAM: Putative lysophospholipase; alpha/beta hydrolase fold protein complement(361029..362072) Isosphaera pallida ATCC 43644 10154359 YP_004177402.1 CDS Isop_0256 NC_014962.1 362077 363513 R COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013342; KEGG: rba:RB10855 muconate cycloisomerase I; PFAM: Mandelate racemase/muconate lactonizing protein; SPTR: Muconate cycloisomerase I; PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; mandelate racemase/muconate lactonizing protein complement(362077..363513) Isosphaera pallida ATCC 43644 10154360 YP_004177403.1 CDS Isop_0257 NC_014962.1 363565 364128 D COGs: COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); InterProIPR020599: IPR011768: IPR013185: IPR001059: IPR 015365; KEGG: aca:ACP_2876 translation elongation factor P; PFAM: Elongation factor P; Elongation factor P/YeiP protein; Elongation factor KOW-like domain-containing protein; SPTR: Elongation factor P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P; translation elongation factor P 363565..364128 Isosphaera pallida ATCC 43644 10154361 YP_004177404.1 CDS Isop_0258 NC_014962.1 364312 367308 R InterPro IPR008454; KEGG: rca:Rcas_2197 hypothetical protein; PFAM: Cna B domain protein; SPTR: Conserved repeat domain; PFAM: Cna protein B-type domain; Cna B domain-containing protein complement(364312..367308) Isosphaera pallida ATCC 43644 10154362 YP_004177405.1 CDS Isop_0259 NC_014962.1 368014 370824 R KEGG: hau:Haur_4998 Na-Ca exchanger/integrin-beta4; SPTR: Putative uncharacterized protein; hypothetical protein complement(368014..370824) Isosphaera pallida ATCC 43644 10154363 YP_004177406.1 CDS Isop_0260 NC_014962.1 371319 371963 D COGs: COG1555 DNA uptake protein and related DNA-binding protein; InterPro IPR003583; KEGG: plm:Plim_2967 helix-hairpin-helix DNA-binding class 1; SMART: Helix-hairpin-helix DNA-binding class 1; SPTR: Helix-hairpin-helix DNA-binding class 1; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; helix-hairpin-helix DNA-binding class 1 371319..371963 Isosphaera pallida ATCC 43644 10154364 YP_004177407.1 CDS Isop_0261 NC_014962.1 372838 375609 D COGs: COG0515 Serine/threonine protein kinase; InterProIPR019734: IPR000719: IPR013026: IPR017442: IPR 001440: IPR020635: IPR002290; KEGG: mno:Mnod_2431 peptidase C14 caspase catalytic subunit P20; PFAM: Serine/threonine-protein kinase-like domain; Tetratricopeptide TPR_1 repeat-containing protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; Tetratricopeptide repeat; SPTR: TPR domain protein; PFAM: Protein kinase domain; Tetratricopeptide repeat; TIGRFAM: DNA binding domain, excisionase family; serine/threonine protein kinase 372838..375609 Isosphaera pallida ATCC 43644 10154365 YP_004177408.1 CDS Isop_0262 NC_014962.1 375720 378623 R KEGG: phe:Phep_2409 heparinase II/III family protein; SPTR: Heparinase II/III family protein; hypothetical protein complement(375720..378623) Isosphaera pallida ATCC 43644 10154366 YP_004177409.1 CDS Isop_0263 NC_014962.1 378746 379168 R KEGG: tbr:Tb11.01.4480 hypothetical protein; SPTR: Predicted protein; hypothetical protein complement(378746..379168) Isosphaera pallida ATCC 43644 10154367 YP_004177410.1 CDS Isop_0264 NC_014962.1 379456 380343 D COGs: COG0325 enzyme with a TIM-barrel fold; InterPro IPR011078: IPR001608; KEGG: psl:Psta_1019 alanine racemase domain protein; PFAM: alanine racemase domain protein; SPTR: Alanine racemase domain protein; PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family; alanine racemase domain-containing protein 379456..380343 Isosphaera pallida ATCC 43644 10154368 YP_004177411.1 CDS Isop_0265 NC_014962.1 380411 380806 D COGs: COG1872 conserved hypothetical protein; InterPro IPR003746; KEGG: scl:sce8156 hypothetical protein; PFAM: protein of unknown function DUF167; SPTR: UPF0235 protein DehlyDRAFT_1349; PFAM: Uncharacterised ACR, YggU family COG1872; TIGRFAM: conserved hypothetical protein TIGR00251; hypothetical protein 380411..380806 Isosphaera pallida ATCC 43644 10154369 YP_004177412.1 CDS Isop_0266 NC_014962.1 380851 382386 R COGs: COG0606 ATPase with chaperone activity; InterPro IPR004482: IPR001208: IPR000523: IPR003593; KEGG: plm:Plim_0159 Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; SMART: AAA ATPase; SPTR: Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein; Mg chelatase subunit ChlI complement(380851..382386) Isosphaera pallida ATCC 43644 10154370 YP_004177413.1 CDS Isop_0267 NC_014962.1 382899 385247 D COGs: COG1706 Flagellar basal-body P-ring protein; InterPro IPR001782; KEGG: plm:Plim_1168 flagellar P-ring protein; PFAM: flagellar P-ring protein; SPTR: Flagellar P-ring protein; PFAM: Flagellar P-ring protein; flagellar P-ring protein 382899..385247 Isosphaera pallida ATCC 43644 10154371 YP_004177414.1 CDS Isop_0268 NC_014962.1 385509 385895 R KEGG: fra:Francci3_0051 hypothetical protein; SPTR: Lyase; hypothetical protein complement(385509..385895) Isosphaera pallida ATCC 43644 10154372 YP_004177415.1 CDS Isop_0269 NC_014962.1 386243 386818 D InterPro IPR001789: IPR010093; KEGG: psl:Psta_3012 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator receiver protein; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: Response regulator receiver domain; TIGRFAM: DNA binding domain, excisionase family; excisionase family DNA-binding domain-containing protein 386243..386818 Isosphaera pallida ATCC 43644 10154373 YP_004177416.1 CDS Isop_0270 NC_014962.1 387190 387714 D COGs: COG0315 Molybdenum cofactor biosynthesis enzyme; InterPro IPR002820; KEGG: mbt:JTY_3390 molybdenum cofactor biosynthesis protein MoaC; PFAM: molybdopterin cofactor biosynthesis protein MoaC; SPTR: Molybdenum cofactor biosynthesis protein C 3 moaC3; TIGRFAM: molybdenum cofactor biosynthesis protein C; manually curated; PFAM: MoaC family; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC; GTP cyclohydrolase subunit MoaC 387190..387714 Isosphaera pallida ATCC 43644 10154374 YP_004177417.1 CDS Isop_0271 NC_014962.1 387770 388810 D COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: plm:Plim_0149 trans-hexaprenyltranstransferase; PFAM: Polyprenyl synthetase; SPTR: Trans-hexaprenyltranstransferase; PFAM: Polyprenyl synthetase; polyprenyl synthetase 387770..388810 Isosphaera pallida ATCC 43644 10154375 YP_004177418.1 CDS Isop_0272 NC_014962.1 388961 390406 R COGs: COG0793 Periplasmic protease; InterPro IPR001478: IPR004447: IPR005151; KEGG: plm:Plim_2514 carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; SPTR: Carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); C-terminal processing peptidase-3 complement(388961..390406) Isosphaera pallida ATCC 43644 10154376 YP_004177419.1 CDS Isop_0273 NC_014962.1 390781 392937 D COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006655: IPR006963: IPR006656: IPR006657; KEGG: hau:Haur_4673 molybdopterin oxidoreductase; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; PRIAM: Nitrate reductase; SPTR: Molybdopterin oxidoreductase; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; nitrate reductase 390781..392937 Isosphaera pallida ATCC 43644 10154377 YP_004177420.1 CDS Isop_0274 NC_014962.1 392934 393707 D COGs: COG3222 conserved hypothetical protein; InterPro IPR018641; KEGG: gsu:GSU0485 hypothetical protein; PFAM: Protein of unknown function DUF2064; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2064); hypothetical protein 392934..393707 Isosphaera pallida ATCC 43644 10154378 YP_004177421.1 CDS Isop_0275 NC_014962.1 393807 394655 D COGs: COG0005 Purine nucleoside phosphorylase; InterPro IPR011268: IPR011270: IPR000845; KEGG: psl:Psta_3240 purine nucleoside phosphorylase I, inosine and guanosine-specific; PFAM: purine or other phosphorylase family 1; SPTR: Purine nucleoside phosphorylase I, inosine and guanosine-specific; TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine guanosine and xanthosine phosphorylase family; PFAM: Phosphorylase superfamily; TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine guanosine and xanthosine phosphorylase family; purine nucleoside phosphorylase I 393807..394655 Isosphaera pallida ATCC 43644 10154379 YP_004177422.1 CDS Isop_0276 NC_014962.1 394693 397476 R COGs: COG0474 Cation transport ATPase; InterProIPR001757: IPR000695: IPR018303: IPR004014: IPR 008250: IPR005834: IPR006068; KEGG: sat:SYN_00872 calcium-transporting ATPase; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; SPTR: Calcium-transporting ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; potassium and/or sodium efflux P-type ATPase, fungal-type; HAD superfamily P-type ATPase complement(394693..397476) Isosphaera pallida ATCC 43644 10154380 YP_004177423.1 CDS Isop_0277 NC_014962.1 397819 399393 D COGs: COG3653 N-acyl-D-aspartate/D-glutamate deacylase; InterPro IPR013108: IPR012855; KEGG: sro:Sros_1552 N-acyl-D-glutamate deacylase; PFAM: D-aminoacylase domain protein; Amidohydrolase 3; PRIAM: N-acyl-D-glutamate deacylase; SPTR: N-acyl-D-glutamate deacylase; PFAM: D-aminoacylase, C-terminal region; Amidohydrolase family; N-acyl-D-glutamate deacylase 397819..399393 Isosphaera pallida ATCC 43644 10154381 YP_004177424.1 CDS Isop_0278 NC_014962.1 399521 402043 D InterPro IPR000834: IPR008391; KEGG: psl:Psta_2878 hypothetical protein; PFAM: Acetyl xylan esterase; SPTR: Putative uncharacterized protein; PFAM: Acetyl xylan esterase (AXE1); acetyl xylan esterase 399521..402043 Isosphaera pallida ATCC 43644 10154382 YP_004177425.1 CDS Isop_0279 NC_014962.1 402087 402560 D KEGG: fre:Franean1_5618 ATP-dependent transcription regulator LuxR; SPTR: ATP-dependent transcriptional regulator, MalT-like, LuxR family; hypothetical protein 402087..402560 Isosphaera pallida ATCC 43644 10154383 YP_004177426.1 CDS Isop_0280 NC_014962.1 402666 403319 R COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: pvi:Cvib_1640 beta-lactamase domain-containing protein; SPTR: Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily; beta-lactamase domain-containing protein complement(402666..403319) Isosphaera pallida ATCC 43644 10154384 YP_004177427.1 CDS Isop_0281 NC_014962.1 403303 404169 R InterPro IPR011444: IPR010869; KEGG: psl:Psta_3333 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501); Protein of unknown function (DUF1549); hypothetical protein complement(403303..404169) Isosphaera pallida ATCC 43644 10154385 YP_004177428.1 CDS Isop_0282 NC_014962.1 404250 404516 R KEGG: min:Minf_1147 Zn-dependent hydrolase, glyoxylase family; SPTR: Putative uncharacterized protein; Zn-dependent hydrolase, glyoxylase family complement(404250..404516) Isosphaera pallida ATCC 43644 10154386 YP_004177429.1 CDS Isop_0283 NC_014962.1 404685 405689 R COGs: COG0059 Ketol-acid reductoisomerase; InterPro IPR013023: IPR013116: IPR000506; KEGG: psl:Psta_4689 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase catalytic domain-containing protein; acetohydroxy acid isomeroreductase; PRIAM: Ketol-acid reductoisomerase; SPTR: Ketol-acid reductoisomerase; TIGRFAM: ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase; ketol-acid reductoisomerase complement(404685..405689) Isosphaera pallida ATCC 43644 10154387 YP_004177430.1 CDS Isop_0284 NC_014962.1 405979 406554 R COGs: COG0440 Acetolactate synthase small (regulatory) subunit; InterPro IPR004789: IPR002912: IPR019455; KEGG: psl:Psta_4688 acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein; SPTR: Acetolactate synthase, small subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: Small subunit of acetolactate synthase; ACT domain; TIGRFAM: acetolactate synthase, small subunit; acetolactate synthase small subunit complement(405979..406554) Isosphaera pallida ATCC 43644 10154388 YP_004177431.1 CDS Isop_0285 NC_014962.1 406981 407466 D InterPro IPR017504; KEGG: rba:RB4470 signal peptide; SPTR: Putative uncharacterized protein; TIGRFAM: Planctomycetes uncharacterized domain TIGR03067; hypothetical protein 406981..407466 Isosphaera pallida ATCC 43644 10154389 YP_004177432.1 CDS Isop_0286 NC_014962.1 407761 409158 R InterPro IPR005829; KEGG: rrs:RoseRS_0128 peptidase C14, caspase catalytic subunit P20; SPTR: Peptidase C14, caspase catalytic subunit p20; hypothetical protein complement(407761..409158) Isosphaera pallida ATCC 43644 10154390 YP_004177433.1 CDS Isop_0287 NC_014962.1 409411 410736 R COGs: COG1904 Glucuronate isomerase; KEGG: plm:Plim_2160 amidohydrolase 2; SPTR: Putative uncharacterized protein; PFAM: Glucuronate isomerase; amidohydrolase 2 complement(409411..410736) Isosphaera pallida ATCC 43644 10154391 YP_004177434.1 CDS Isop_0289 NC_014962.1 411210 411725 R KEGG: cdi:DIP0357 putative secreted bifunctional (alpha-amylase and endo-alpha-glucosidase): starch degradation and integral membrane protein; SPTR: Putative secreted bifunctional (Alpha-amylase and endo-alpha-glucosidase): starch degradation and integral membrane protein; hypothetical protein complement(411210..411725) Isosphaera pallida ATCC 43644 10154393 YP_004177435.1 CDS Isop_0290 NC_014962.1 411722 413599 R COGs: COG3379 conserved hypothetical protein; InterPro IPR001917: IPR002591; KEGG: hoh:Hoch_2285 type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; SPTR: Type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase; type I phosphodiesterase/nucleotide pyrophosphatase complement(411722..413599) Isosphaera pallida ATCC 43644 10154394 YP_004177436.1 CDS Isop_0291 NC_014962.1 413596 413802 R KEGG: psb:Psyr_1958 non-ribosomal peptide synthase:amino acid adenylation; SPTR: Non-ribosomal peptide synthase:Amino acid adenylation; hypothetical protein complement(413596..413802) Isosphaera pallida ATCC 43644 10154395 YP_004177437.1 CDS Isop_0292 NC_014962.1 414268 416829 R InterPro IPR009056: IPR013427; KEGG: plm:Plim_3308 heme-binding protein; SPTR: Putative uncharacterized protein; TIGRFAM: heme-binding protein; PFAM: Cytochrome c; TIGRFAM: putative heme-binding domain, Pirellula/Verrucomicrobium type; heme-binding protein complement(414268..416829) Isosphaera pallida ATCC 43644 10154396 YP_004177438.1 CDS Isop_0294 NC_014962.1 418094 419104 D InterPro IPR001173; KEGG: jan:Jann_0217 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase 418094..419104 Isosphaera pallida ATCC 43644 10154398 YP_004177439.1 CDS Isop_0295 NC_014962.1 419101 420096 D KEGG: nda:Ndas_1372 transcriptional regulator, winged helix family; SPTR: Transcriptional regulator, winged helix family; hypothetical protein 419101..420096 Isosphaera pallida ATCC 43644 10154399 YP_004177440.1 CDS Isop_0296 NC_014962.1 420207 420896 D COGs: COG0259 Pyridoxamine-phosphate oxidase; InterPro IPR000659: IPR019740: IPR011576: IPR019576; KEGG: bmj:BMULJ_02532 pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; Pyridoxine 5'-phosphate oxidase, dimerisation-like; PRIAM: Pyridoxal 5'-phosphate synthase; SPTR: Pyridoxine/pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: Pyridoxamine 5'-phosphate oxidase; Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region; TIGRFAM: pyridoxamine-phosphate oxidase; Pyridoxamine 5'-phosphate oxidase 420207..420896 Isosphaera pallida ATCC 43644 10154400 YP_004177441.1 CDS Isop_0297 NC_014962.1 420839 425794 R KEGG: aor:AO090020000039 guanine nucleotide exchange factor; SPTR: Alpha-2-macroglobulin domain protein; manually curated; hypothetical protein complement(420839..425794) Isosphaera pallida ATCC 43644 10154401 YP_004177442.1 CDS Isop_0298 NC_014962.1 426869 427675 R InterPro IPR018247; KEGG: rbi:RB2501_05365 probable large multifunctional protein-putative glycosyl hydrolase; SPTR: Probable large multifunctional protein-putative glycosyl hydrolase; hypothetical protein complement(426869..427675) Isosphaera pallida ATCC 43644 10154403 YP_004177443.1 CDS Isop_0299 NC_014962.1 427925 428269 R COGs: COG3169 conserved hypothetical protein; InterPro IPR007437; KEGG: dia:Dtpsy_2708 protein of unknown function DUF486; PFAM: protein of unknown function DUF486; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function, DUF486; hypothetical protein complement(427925..428269) Isosphaera pallida ATCC 43644 10154404 YP_004177444.1 CDS Isop_0300 NC_014962.1 428465 429628 R COGs: COG2382 Enterochelin esterase; InterPro IPR004193: IPR000801; KEGG: sli:Slin_1254 putative esterase; PFAM: esterase; glycoside hydrolase family 13 domain protein; SPTR: Putative esterase; PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Putative esterase; esterase complement(428465..429628) Isosphaera pallida ATCC 43644 10154405 YP_004177445.1 CDS Isop_0301 NC_014962.1 430038 430664 D KEGG: psl:Psta_3458 methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: DsrE/DsrF-like family; hypothetical protein 430038..430664 Isosphaera pallida ATCC 43644 10154406 YP_004177446.1 CDS Isop_0302 NC_014962.1 430694 432175 D COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: plm:Plim_0571 sulfatase; PFAM: sulfatase; SPTR: Sulfatase; PFAM: Sulfatase; sulfatase 430694..432175 Isosphaera pallida ATCC 43644 10154407 YP_004177447.1 CDS Isop_0303 NC_014962.1 432189 432686 D COGs: COG2110 phosphatase homologous to the C-terminal domain of histone macroH2A1; InterPro IPR002589; KEGG: rba:RB4366 hypothetical protein; PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein; SPTR: Putative uncharacterized protein; PFAM: Macro domain; Appr-1-p processing protein 432189..432686 Isosphaera pallida ATCC 43644 10154408 YP_004177448.1 CDS Isop_0304 NC_014962.1 432751 434085 R COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: rba:RB7823 transaminase; PFAM: aminotransferase class I and II; SPTR: Probable transaminase; PFAM: Aminotransferase class I and II; class I/II aminotransferase complement(432751..434085) Isosphaera pallida ATCC 43644 10154409 YP_004177449.1 CDS Isop_0305 NC_014962.1 434412 435761 R InterPro IPR000297; KEGG: plm:Plim_2735 PpiC-type peptidyl-prolyl cis-trans isomerase; SPTR: PpiC-type peptidyl-prolyl cis-trans isomerase; hypothetical protein complement(434412..435761) Isosphaera pallida ATCC 43644 10154410 YP_004177450.1 CDS Isop_0306 NC_014962.1 436142 437998 D COGs: COG0405 Gamma-glutamyltransferase; InterPro IPR000101; KEGG: gau:GAU_2335 gamma-glutamyltranspeptidase precursor; PFAM: gamma-glutamyltranspeptidase; PRIAM: Gamma-glutamyltransferase; SPTR: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltransferase; PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 436142..437998 Isosphaera pallida ATCC 43644 10154411 YP_004177451.1 CDS Isop_0307 NC_014962.1 438334 438726 D InterPro IPR000119; KEGG: tgr:Tgr7_2924 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; SPTR: Histone family protein DNA-binding protein; PFAM: Bacterial DNA-binding protein; histone family protein DNA-binding protein 438334..438726 Isosphaera pallida ATCC 43644 10154412 YP_004177452.1 CDS Isop_0308 NC_014962.1 439321 439755 D InterPro IPR013096; KEGG: mka:MK0873 mannose-6-phosphate isomerase; PFAM: Cupin 2 conserved barrel domain protein; SPTR: Cupin 2 conserved barrel domain protein; PFAM: Cupin domain; cupin 439321..439755 Isosphaera pallida ATCC 43644 10154413 YP_004177453.1 CDS Isop_0309 NC_014962.1 439946 441421 R COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: psl:Psta_1220 efflux transporter, RND family, MFP subunit; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter MFP subunit complement(439946..441421) Isosphaera pallida ATCC 43644 10154415 YP_004177454.1 CDS Isop_0310 NC_014962.1 441749 443191 R COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027: IPR004099: IPR000815; KEGG: hch:HCH_00152 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: Putative pyridine nucleotide-disulfide oxidoreductase, class I; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(441749..443191) Isosphaera pallida ATCC 43644 10154416 YP_004177455.1 CDS Isop_0311 NC_014962.1 443238 444719 R InterPro IPR010869: IPR006311: IPR017909; KEGG: rba:RB12159 hypothetical protein; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501); hypothetical protein complement(443238..444719) Isosphaera pallida ATCC 43644 10154417 YP_004177456.1 CDS Isop_0312 NC_014962.1 444828 448133 R InterPro IPR011444; KEGG: rba:RB12155 signal peptide; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553); hypothetical protein complement(444828..448133) Isosphaera pallida ATCC 43644 10154418 YP_004177457.1 CDS Isop_0313 NC_014962.1 448677 451265 D KEGG: aag:AaeL_AAEL001032 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 448677..451265 Isosphaera pallida ATCC 43644 10154419 YP_004177458.1 CDS Isop_0314 NC_014962.1 451653 453788 D InterPro IPR013740: IPR009056: IPR017936; KEGG: psl:Psta_2862 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: Redoxin domain protein; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: Copper type II ascorbate-dependent monooxygenase, C-terminal domain; Redoxin; redoxin domain-containing protein 451653..453788 Isosphaera pallida ATCC 43644 10154420 YP_004177459.1 CDS Isop_0315 NC_014962.1 454105 455901 D COGs: COG1032 Fe-S oxidoreductase; InterPro IPR007197: IPR006638; KEGG: rba:RB5334 Fe-S oxidoreductase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Fe-S oxidoreductase; PFAM: Radical SAM superfamily; radical SAM protein 454105..455901 Isosphaera pallida ATCC 43644 10154421 YP_004177460.1 CDS Isop_0316 NC_014962.1 456005 456637 D KEGG: rrs:RoseRS_1412 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 456005..456637 Isosphaera pallida ATCC 43644 10154422 YP_004177461.1 CDS Isop_0317 NC_014962.1 456640 457431 D COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR004033; KEGG: psl:Psta_1787 ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; SPTR: Menaquinone biosynthesis methyltransferase ubiE; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: ubiE/COQ5 methyltransferase family; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases; ubiquinone/menaquinone biosynthesis methyltransferase 456640..457431 Isosphaera pallida ATCC 43644 10154423 YP_004177462.1 CDS Isop_0318 NC_014962.1 457439 458425 R COGs: COG3494 conserved hypothetical protein; InterPro IPR010415; KEGG: plm:Plim_2359 protein of unknown function DUF1009; PFAM: protein of unknown function DUF1009; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1009); hypothetical protein complement(457439..458425) Isosphaera pallida ATCC 43644 10154424 YP_004177463.1 CDS Isop_0319 NC_014962.1 458443 459663 R COGs: COG1044 UDP-3-O-(3-hydroxymyristoyl); InterPro IPR020573: IPR001451: IPR018357: IPR007691; KEGG: plm:Plim_2360 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; transferase hexapeptide repeat containing protein; SPTR: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase complement(458443..459663) Isosphaera pallida ATCC 43644 10154425 YP_004177464.1 CDS Isop_0320 NC_014962.1 459757 462822 R COGs: COG0642 Signal transduction histidine kinase; InterProIPR013655: IPR013656: IPR003661: IPR003594: IPR 001789: IPR000014: IPR004358: IPR005467: IPR000700; KEGG: nde:NIDE1908 putative sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold-3 domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver; SPTR: Sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; multi-sensor hybrid histidine kinase complement(459757..462822) Isosphaera pallida ATCC 43644 10154426 YP_004177465.1 CDS Isop_0321 NC_014962.1 463277 464068 R COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005834: IPR006439; KEGG: plm:Plim_4115 HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: Putative uncharacterized protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; HAD-superfamily hydrolase complement(463277..464068) Isosphaera pallida ATCC 43644 10154427 YP_004177466.1 CDS Isop_0322 NC_014962.1 464011 465180 R COGs: COG0533 Metal-dependent protease with possible chaperone activity; InterPro IPR000905: IPR017861; KEGG: plm:Plim_2513 metalloendopeptidase, glycoprotease family; PFAM: peptidase M22 glycoprotease; PRIAM: O-sialoglycoprotein endopeptidase; SPTR: Metalloendopeptidase, glycoprotease family; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: Glycoprotease family; TIGRFAM: putative glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family; O-sialoglycoprotein endopeptidase complement(464011..465180) Isosphaera pallida ATCC 43644 10154428 YP_004177467.1 CDS Isop_0323 NC_014962.1 465214 466266 R COGs: COG2730 Endoglucanase; InterPro IPR001547: IPR018087; KEGG: trq:TRQ2_1074 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 5; SPTR: Glycoside hydrolase family 5; PFAM: Cellulase (glycosyl hydrolase family 5); glycoside hydrolase family protein complement(465214..466266) Isosphaera pallida ATCC 43644 10154429 YP_004177468.1 CDS Isop_0324 NC_014962.1 466324 467526 R COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000994; KEGG: psl:Psta_2870 peptidase M24; PFAM: peptidase M24; SPTR: Peptidase M24; PFAM: Metallopeptidase family M24; peptidase M24 complement(466324..467526) Isosphaera pallida ATCC 43644 10154430 YP_004177469.1 CDS Isop_0325 NC_014962.1 467752 468783 R COGs: COG3252 Methenyltetrahydromethanopterin cyclohydrolase; InterPro IPR003209; KEGG: plm:Plim_2586 methenyltetrahydromethanopterin cyclohydrolase; PFAM: Methenyltetrahydromethanopterin cyclohydrolase; PRIAM: Methenyltetrahydromethanopterin cyclohydrolase; SPTR: Methenyltetrahydromethanopterin cyclohydrolase; TIGRFAM: methenyltetrahydromethanopterin cyclohydrolase; PFAM: Cyclohydrolase (MCH); TIGRFAM: methenyltetrahydromethanopterin cyclohydrolase; methenyltetrahydromethanopterin cyclohydrolase complement(467752..468783) Isosphaera pallida ATCC 43644 10154431 YP_004177470.1 CDS Isop_0326 NC_014962.1 468806 469741 R COGs: COG2218 Formylmethanofuran dehydrogenase subunit C; InterPro IPR002489: IPR017550; KEGG: nhl:Nhal_0012 formylmethanofuran dehydrogenase subunit C; PFAM: glutamate synthase alpha subunit domain protein; PRIAM: Formylmethanofuran dehydrogenase; SPTR: Formylmethanofuran dehydrogenase subunit C; TIGRFAM: formylmethanofuran dehydrogenase subunit C; PFAM: GXGXG motif; TIGRFAM: formylmethanofuran dehydrogenase subunit C; formylmethanofuran dehydrogenase subunit C complement(468806..469741) Isosphaera pallida ATCC 43644 10154432 YP_004177471.1 CDS Isop_0327 NC_014962.1 470272 471228 R COGs: COG1560 Lauroyl/myristoyl acyltransferase; InterPro IPR004960; KEGG: tgr:Tgr7_0480 lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; PFAM: lipid A biosynthesis acyltransferase; SPTR: Lipid A biosynthesis lauroyl (Or palmitoleoyl) acyltransferase; PFAM: Bacterial lipid A biosynthesis acyltransferase; lipid A biosynthesis acyltransferase complement(470272..471228) Isosphaera pallida ATCC 43644 10154433 YP_004177472.1 CDS Isop_0328 NC_014962.1 471314 471601 R InterPro IPR006163: IPR009081; KEGG: drt:Dret_1416 acyl carrier protein; PFAM: phosphopantetheine-binding; SPTR: Phosphopantetheine-binding; PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein; phosphopantetheine-binding protein complement(471314..471601) Isosphaera pallida ATCC 43644 10154434 YP_004177473.1 CDS Isop_0329 NC_014962.1 471598 472893 R COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR014030: IPR014031; KEGG: aae:aq_1717 3-oxoacyl-[acyl-carrier-protein] synthase II; PFAM: Beta-ketoacyl synthase; SPTR: 3-oxoacyl-[acyl-carrier-protein] synthase II; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; beta-ketoacyl synthase complement(471598..472893) Isosphaera pallida ATCC 43644 10154435 YP_004177474.1 CDS Isop_0330 NC_014962.1 473151 473918 D COGs: COG0110 Acetyltransferase (isoleucine patch superfamily); InterPro IPR001451: IPR018357; KEGG: scl:sce6563 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial transferase hexapeptide (three repeats); hypothetical protein 473151..473918 Isosphaera pallida ATCC 43644 10154436 YP_004177475.1 CDS Isop_0331 NC_014962.1 473973 474218 D InterPro IPR006163: IPR006162: IPR009081; KEGG: scl:sce6564 hypothetical protein; PFAM: phosphopantetheine-binding; SPTR: Putative uncharacterized protein; manually curated; PFAM: Phosphopantetheine attachment site; phosphopantetheine-binding protein 473973..474218 Isosphaera pallida ATCC 43644 10154437 YP_004177476.1 CDS Isop_0332 NC_014962.1 474277 475530 D InterPro IPR002314: IPR000408: IPR006195; KEGG: scl:sce6565 hypothetical protein; PFAM: tRNA synthetase class II (G H P and S); SPTR: SerS1 protein; PFAM: tRNA synthetase class II core domain (G, H, P, S and T); tRNA synthetase class II (G H P and S) 474277..475530 Isosphaera pallida ATCC 43644 10154438 YP_004177477.1 CDS Isop_0333 NC_014962.1 475534 476667 D InterPro IPR000182; KEGG: scl:sce6566 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 475534..476667 Isosphaera pallida ATCC 43644 10154439 YP_004177478.1 CDS Isop_0334 NC_014962.1 476861 478060 D COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: psl:Psta_4753 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase domain-containing protein 476861..478060 Isosphaera pallida ATCC 43644 10154440 YP_004177479.1 CDS Isop_0335 NC_014962.1 478090 480870 R COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765: IPR007863; KEGG: sth:STH913 peptidase; PFAM: peptidase M16 domain protein; SPTR: Peptidase M16 inactive domain family; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); peptidase M16 domain-containing protein complement(478090..480870) Isosphaera pallida ATCC 43644 10154441 YP_004177480.1 CDS Isop_0336 NC_014962.1 480948 481052 R hypothetical protein complement(480948..481052) Isosphaera pallida ATCC 43644 10154442 YP_004177481.1 CDS Isop_0337 NC_014962.1 481049 481738 R COGs: COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN; InterPro IPR002376: IPR001555: IPR004607; KEGG: sti:Sthe_1363 phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; SPTR: Phosphoribosylglycinamide formyltransferase; TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent; phosphoribosylglycinamide formyltransferase complement(481049..481738) Isosphaera pallida ATCC 43644 10154443 YP_004177482.1 CDS Isop_0338 NC_014962.1 481740 484658 R COGs: COG0060 Isoleucyl-tRNA synthetase; InterProIPR002300: IPR013155: IPR010663: IPR001412: IPR 002301: IPR015905; KEGG: mta:Moth_0863 isoleucyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ia; tRNA synthetase valyl/leucyl anticodon-binding; SPTR: Strongly similar to isoleucine tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Zinc finger found in FPG and IleRS; TIGRFAM: isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase complement(481740..484658) Isosphaera pallida ATCC 43644 10154444 YP_004177483.1 CDS Isop_0339 NC_014962.1 485090 488266 R COGs: COG3696 Putative silver efflux pump; InterPro IPR001036: IPR004763; KEGG: mca:MCA2324 CzcA family heavy metal efflux protein; PFAM: acriflavin resistance protein; SPTR: Heavy metal efflux pump, CzcA family; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); CzcA family heavy metal efflux pump complement(485090..488266) Isosphaera pallida ATCC 43644 10154445 YP_004177484.1 CDS Isop_0340 NC_014962.1 488263 489660 R InterPro IPR006143; KEGG: mca:MCA2325 RND family efflux transporter MFP subunit; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter MFP subunit complement(488263..489660) Isosphaera pallida ATCC 43644 10154446 YP_004177485.1 CDS Isop_0341 NC_014962.1 489673 491346 R COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: mca:MCA2329 outer membrane efflux family protein, putative; PFAM: outer membrane efflux protein; SPTR: Putative outer membrane efflux family protein; PFAM: Outer membrane efflux protein; outer membrane efflux protein complement(489673..491346) Isosphaera pallida ATCC 43644 10154447 YP_004177486.1 CDS Isop_0342 NC_014962.1 491707 493134 R InterPro IPR011447: IPR017909; KEGG: psl:Psta_3460 protein of unknown function DUF1552; PFAM: protein of unknown function DUF1552; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1552); hypothetical protein complement(491707..493134) Isosphaera pallida ATCC 43644 10154448 YP_004177487.1 CDS Isop_0343 NC_014962.1 493277 495295 R InterPro IPR013036: IPR013043: IPR013042: IPR013039; KEGG: plm:Plim_0129 protein of unknown function DUF1592; PFAM: protein of unknown function DUF1592; protein of unknown function DUF1595; protein of unknown function DUF1587; protein of unknown function DUF1588; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1592); Protein of unknown function (DUF1587); Protein of unknown function (DUF1588); Protein of unknown function (DUF1595); Protein of unknown function (DUF1585); hypothetical protein complement(493277..495295) Isosphaera pallida ATCC 43644 10154449 YP_004177488.1 CDS Isop_0344 NC_014962.1 495708 497228 D InterPro IPR004861; KEGG: hypothetical protein; PFAM: tyrosine phosphatase; SPTR: Putative uncharacterized protein; PFAM: Tyrosine phosphatase family; tyrosine phosphatase 495708..497228 Isosphaera pallida ATCC 43644 10154450 YP_004177489.1 CDS Isop_0345 NC_014962.1 497393 498733 D COGs: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; InterPro IPR004839; KEGG: caa:Caka_0677 putative transcriptional regulator, GntR family; PFAM: aminotransferase class I and II; SPTR: Aminotransferase; PFAM: Aminotransferase class I and II; GntR family transcriptional regulator 497393..498733 Isosphaera pallida ATCC 43644 10154451 YP_004177490.1 CDS Isop_0346 NC_014962.1 498990 500513 D COGs: COG0795 permease; InterPro IPR005495; KEGG: plm:Plim_2512 permease YjgP/YjgQ family protein; PFAM: permease YjgP/YjgQ family protein; SPTR: Permease YjgP/YjgQ family protein; PFAM: Predicted permease YjgP/YjgQ family; YjgP/YjgQ family permease 498990..500513 Isosphaera pallida ATCC 43644 10154452 YP_004177491.1 CDS Isop_0347 NC_014962.1 500719 501897 D COGs: COG0795 permease; InterPro IPR005495; KEGG: psl:Psta_2358 permease YjgP/YjgQ family protein; PFAM: permease YjgP/YjgQ family protein; SPTR: Permease YjgP/YjgQ family protein; PFAM: Predicted permease YjgP/YjgQ family; YjgP/YjgQ family permease 500719..501897 Isosphaera pallida ATCC 43644 10154453 YP_004177492.1 CDS Isop_0348 NC_014962.1 502045 503064 R KEGG: plm:Plim_3310 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(502045..503064) Isosphaera pallida ATCC 43644 10154454 YP_004177493.1 CDS Isop_0349 NC_014962.1 503412 504227 R KEGG: plm:Plim_3310 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(503412..504227) Isosphaera pallida ATCC 43644 10154455 YP_004177494.1 CDS Isop_0350 NC_014962.1 504434 504658 R KEGG: fre:Franean1_4095 hypothetical protein; hypothetical protein complement(504434..504658) Isosphaera pallida ATCC 43644 10154456 YP_004177495.1 CDS Isop_0351 NC_014962.1 504720 505835 D COGs: COG0620 Methionine synthase II (cobalamin-independent); InterPro IPR002629; KEGG: rca:Rcas_2758 methionine synthase vitamin-B12 independent; PFAM: Methionine synthase vitamin-B12 independent; SPTR: Methionine synthase vitamin-B12 independent; PFAM: Cobalamin-independent synthase, Catalytic domain; vitamin-B12 independent methionine synthase 504720..505835 Isosphaera pallida ATCC 43644 10154457 YP_004177496.1 CDS Isop_0352 NC_014962.1 505844 506794 D COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; KEGG: sli:Slin_6275 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 505844..506794 Isosphaera pallida ATCC 43644 10154458 YP_004177497.1 CDS Isop_0353 NC_014962.1 506847 508397 D COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484: IPR018485: IPR018483: IPR006000; KEGG: plm:Plim_0722 xylulokinase; PFAM: Carbohydrate kinase, FGGY-like; SPTR: Xylulose kinase; TIGRFAM: xylulokinase; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: D-xylulose kinase; xylulokinase 506847..508397 Isosphaera pallida ATCC 43644 10154459 YP_004177498.1 CDS Isop_0354 NC_014962.1 508559 512821 R KEGG: ade:Adeh_0165 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(508559..512821) Isosphaera pallida ATCC 43644 10154460 YP_004177499.1 CDS Isop_0355 NC_014962.1 512860 513771 R KEGG: pan:PODANSg5339 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(512860..513771) Isosphaera pallida ATCC 43644 10154461 YP_004177500.1 CDS Isop_0356 NC_014962.1 514059 515504 R KEGG: plm:Plim_0529 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(514059..515504) Isosphaera pallida ATCC 43644 10154462 YP_004177501.1 CDS Isop_0357 NC_014962.1 515613 515831 D KEGG: cfa:474868 bromodomain containing 2; SPTR: Putative uncharacterized protein Brd2; bromodomain containing 2 515613..515831 Isosphaera pallida ATCC 43644 10154463 YP_004177502.1 CDS Isop_0358 NC_014962.1 516025 516765 D KEGG: dre:797750 KIAA1447-like; SPTR: Putative uncharacterized protein; hypothetical protein 516025..516765 Isosphaera pallida ATCC 43644 10154464 YP_004177503.1 CDS Isop_0359 NC_014962.1 516928 518379 R KEGG: plm:Plim_0766 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(516928..518379) Isosphaera pallida ATCC 43644 10154465 YP_004177504.1 CDS Isop_0360 NC_014962.1 518458 519615 R COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: plm:Plim_1158 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase complement(518458..519615) Isosphaera pallida ATCC 43644 10154466 YP_004177505.1 CDS Isop_0361 NC_014962.1 519642 520709 R KEGG: nda:Ndas_3773 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0104); hypothetical protein complement(519642..520709) Isosphaera pallida ATCC 43644 10154467 YP_004177506.1 CDS Isop_0362 NC_014962.1 521268 522191 D KEGG: rcu:RCOM_0939530 protein binding protein, putative; SPTR: Proline-rich extensin-like protein; hypothetical protein 521268..522191 Isosphaera pallida ATCC 43644 10154468 YP_004177507.1 CDS Isop_0363 NC_014962.1 522444 524249 R COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR011547; KEGG: plm:Plim_3748 sulphate transporter; PFAM: sulphate transporter; SPTR: Sulphate transporter; PFAM: Sulfate transporter family; sulfate transporter complement(522444..524249) Isosphaera pallida ATCC 43644 10154469 YP_004177508.1 CDS Isop_0364 NC_014962.1 524346 525119 R COGs: COG3260 Ni Fe-hydrogenase III small subunit; InterPro IPR006137: IPR017900: IPR017896; KEGG: geo:Geob_1699 NADH ubiquinone oxidoreductase 20 kDa subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; SPTR: NADH ubiquinone oxidoreductase 20 kDa subunit; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; NADH ubiquinone oxidoreductase 20 kDa subunit complement(524346..525119) Isosphaera pallida ATCC 43644 10154470 YP_004177509.1 CDS Isop_0365 NC_014962.1 525132 526658 R COGs: COG3261 Ni Fe-hydrogenase III large subunit; InterPro IPR001268; KEGG: geo:Geob_1700 NADH dehydrogenase (ubiquinone) 30 kDa subunit; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; SPTR: NADH dehydrogenase (Ubiquinone) 30 kDa subunit; PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; Respiratory-chain NADH dehydrogenase, 49 Kd subunit; NADH dehydrogenase (ubiquinone) 30 kDa subunit complement(525132..526658) Isosphaera pallida ATCC 43644 10154471 YP_004177510.1 CDS Isop_0366 NC_014962.1 526655 528166 R COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit; InterPro IPR001750; KEGG: dat:HRM2_39000 HyfF; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: HyfF; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH/ubiquinone/plastoquinone complement(526655..528166) Isosphaera pallida ATCC 43644 10154472 YP_004177511.1 CDS Isop_0367 NC_014962.1 528171 528821 R COGs: COG4237 Hydrogenase 4 membrane component (E); KEGG: dat:HRM2_38990 HyfE; SPTR: NAD-dependent dehydrogenase subunit; NAD-dependent dehydrogenase subunit complement(528171..528821) Isosphaera pallida ATCC 43644 10154473 YP_004177512.1 CDS Isop_0368 NC_014962.1 528818 529750 R COGs: COG0650 Formate hydrogenlyase subunit 4; KEGG: gme:Gmet_0374 respiratory-chain NADH dehydrogenase subunit 1; SPTR: Respiratory-chain NADH dehydrogenase, subunit 1; PFAM: NADH dehydrogenase; respiratory-chain NADH dehydrogenase subunit 1 complement(528818..529750) Isosphaera pallida ATCC 43644 10154474 YP_004177513.1 CDS Isop_0369 NC_014962.1 529747 531750 R COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit; InterPro IPR001750: IPR003918; KEGG: dat:HRM2_38970 HyfB; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: HyfB; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH/ubiquinone/plastoquinone complement(529747..531750) Isosphaera pallida ATCC 43644 10154475 YP_004177514.1 CDS Isop_0370 NC_014962.1 531752 532447 R COGs: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); InterPro IPR000551: IPR010093: IPR002178; KEGG: gur:Gura_0893 putative PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: regulatory protein MerR; SPTR: Putative PTS IIA-like nitrogen-regulatory protein PtsN; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; TIGRFAM: DNA binding domain, excisionase family; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN complement(531752..532447) Isosphaera pallida ATCC 43644 10154476 YP_004177515.1 CDS Isop_0371 NC_014962.1 532908 533246 D COGs: COG0640 transcriptional regulator protein; InterPro IPR001845; KEGG: plm:Plim_3775 regulatory protein ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Regulatory protein ArsR; PFAM: Bacterial regulatory protein, arsR family; ArsR family transcriptional regulator 532908..533246 Isosphaera pallida ATCC 43644 10154477 YP_004177516.1 CDS Isop_0372 NC_014962.1 533863 534225 D InterPro IPR002645: IPR003658; KEGG: plm:Plim_2057 anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: Probable anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor); TIGRFAM: anti-anti-sigma factor; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; anti-anti-sigma factor 533863..534225 Isosphaera pallida ATCC 43644 10154478 YP_004177517.1 CDS Isop_0373 NC_014962.1 534567 537257 D COGs: COG0249 Mismatch repair ATPase (MutS family); InterProIPR007695: IPR007860: IPR007696: IPR007861: IPR 000432: IPR005748; KEGG: plm:Plim_4057 DNA mismatch repair protein MutS; PFAM: MutS III domain protein; DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; SPTR: DNA mismatch repair protein mutS; TIGRFAM: DNA mismatch repair protein MutS; PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS; DNA mismatch repair protein MutS 534567..537257 Isosphaera pallida ATCC 43644 10154479 YP_004177518.1 CDS Isop_0374 NC_014962.1 537404 538792 D InterPro IPR013517; KEGG: psl:Psta_0040 FG-GAP repeat protein; PFAM: FG-GAP repeat protein; SPTR: FG-GAP repeat protein; PFAM: FG-GAP repeat; FG-GAP repeat-containing protein 537404..538792 Isosphaera pallida ATCC 43644 10154480 YP_004177519.1 CDS Isop_0375 NC_014962.1 538867 539988 R COGs: COG4783 Putative Zn-dependent protease contains TPR repeats; InterPro IPR001440: IPR019734: IPR013026; KEGG: cyp:PCC8801_1300 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: TPR repeat-containing protein; PFAM: Tetratricopeptide repeat; hypothetical protein complement(538867..539988) Isosphaera pallida ATCC 43644 10154481 YP_004177520.1 CDS Isop_0376 NC_014962.1 540187 541293 R InterPro IPR012902: IPR001120; KEGG: plm:Plim_3345 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein complement(540187..541293) Isosphaera pallida ATCC 43644 10154482 YP_004177521.1 CDS Isop_0377 NC_014962.1 541875 542099 R KEGG: mxa:MXAN_3772 putative lipoprotein; SPTR: Putative lipoprotein; putative lipoprotein complement(541875..542099) Isosphaera pallida ATCC 43644 10154483 YP_004177522.1 CDS Isop_0378 NC_014962.1 542530 543105 D KEGG: reu:Reut_A1745 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 542530..543105 Isosphaera pallida ATCC 43644 10154484 YP_004177523.1 CDS Isop_0379 NC_014962.1 543119 544087 R COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR003148; KEGG: rba:RB2059 putative nucleoside-diphosphate-sugar epimerase; PFAM: TrkA-N domain protein; SPTR: Putative uncharacterized protein; PFAM: NAD dependent epimerase/dehydratase family; TrkA-N domain-containing protein complement(543119..544087) Isosphaera pallida ATCC 43644 10154485 YP_004177524.1 CDS Isop_0380 NC_014962.1 544084 544635 R COGs: COG0816 endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis); InterPro IPR005227: IPR006641; KEGG: psl:Psta_3924 Holliday junction resolvase YqgF; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; SPTR: Putative Holliday junction resolvase; PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: RNAse H-fold protein YqgF; Holliday junction resolvase YqgF complement(544084..544635) Isosphaera pallida ATCC 43644 10154486 YP_004177525.1 CDS Isop_0381 NC_014962.1 544684 545772 R COGs: COG0836 Mannose-1-phosphate guanylyltransferase; InterPro IPR005835: IPR001538; KEGG: ttr:Tter_0486 mannose-1-phosphate guanylyltransferase (GDP); PFAM: Nucleotidyl transferase; mannose-6-phosphate isomerase type II; PRIAM: Mannose-1-phosphate guanylyltransferase; SPTR: Mannose-1-phosphate guanylyltransferase; PFAM: Nucleotidyl transferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; mannose-1-phosphate guanylyltransferase complement(544684..545772) Isosphaera pallida ATCC 43644 10154487 YP_004177526.1 CDS Isop_0382 NC_014962.1 545830 547287 R COGs: COG4284 UDP-glucose pyrophosphorylase; InterPro IPR002618; KEGG: rba:RB6977 UDP-N-acetylhexosamine pyrophosphorylase; PFAM: UTP--glucose-1-phosphate uridylyltransferase; SPTR: UTP--glucose-1-phosphate uridylyltransferase subfamily; PFAM: UTP--glucose-1-phosphate uridylyltransferase; UTP--glucose-1-phosphate uridylyltransferase complement(545830..547287) Isosphaera pallida ATCC 43644 10154488 YP_004177527.1 CDS Isop_0383 NC_014962.1 547400 548203 R COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; KEGG: rba:RB11859 PhnP protein homolog-putative hydrolase; SPTR: PhnP protein homolog-putative hydrolase; PFAM: Metallo-beta-lactamase superfamily; Metal-dependent hydrolase of the beta-lactamase superfamily I complement(547400..548203) Isosphaera pallida ATCC 43644 10154489 YP_004177528.1 CDS Isop_0384 NC_014962.1 548337 549446 R KEGG: psl:Psta_2877 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(548337..549446) Isosphaera pallida ATCC 43644 10154490 YP_004177529.1 CDS Isop_0385 NC_014962.1 549890 551536 D COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; KEGG: plm:Plim_3516 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase; hypothetical protein 549890..551536 Isosphaera pallida ATCC 43644 10154491 YP_004177530.1 CDS Isop_0386 NC_014962.1 551557 553050 R KEGG: kfl:Kfla_1513 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(551557..553050) Isosphaera pallida ATCC 43644 10154492 YP_004177531.1 CDS Isop_0387 NC_014962.1 553122 553676 R KEGG: vha:VIBHAR_00898 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate- D-alanyl-D -alanyl ligase; SPTR: Abhydrolase domain-containing protein; hypothetical protein complement(553122..553676) Isosphaera pallida ATCC 43644 10154493 YP_004177532.1 CDS Isop_0388 NC_014962.1 553947 554957 R COGs: COG0863 DNA modification methylase; InterPro IPR002941: IPR002052: IPR001091; KEGG: psl:Psta_0519 DNA methylase N-4/N-6 domain protein; PFAM: DNA methylase N-4/N-6 domain protein; SPTR: Adenine-specific methyltransferase; PFAM: DNA methylase; DNA methylase N-4/N-6 domain-containing protein complement(553947..554957) Isosphaera pallida ATCC 43644 10154494 YP_004177533.1 CDS Isop_0389 NC_014962.1 555180 556502 D InterPro IPR014338; KEGG: hau:Haur_4051 hypothetical protein; SPTR: Leucine-rich repeat-containing protein typical subtype; TIGRFAM: repeat-companion domain protein; TIGRFAM: repeat-companion domain TIGR02996; repeat-companion domain-containing protein 555180..556502 Isosphaera pallida ATCC 43644 10154495 YP_004177534.1 CDS Isop_0390 NC_014962.1 556599 558125 D InterPro IPR003590; KEGG: hau:Haur_4051 hypothetical protein; SPTR: Leucine-rich repeat-containing protein typical subtype; TIGRFAM: repeat-companion domain TIGR02996; hypothetical protein 556599..558125 Isosphaera pallida ATCC 43644 10154496 YP_004177535.1 CDS Isop_0391 NC_014962.1 558392 560050 D InterPro IPR014338; KEGG: hau:Haur_4051 hypothetical protein; SPTR: Leucine-rich repeat-containing protein typical subtype; TIGRFAM: repeat-companion domain protein; TIGRFAM: repeat-companion domain TIGR02996; repeat-companion domain-containing protein 558392..560050 Isosphaera pallida ATCC 43644 10154497 YP_004177536.1 CDS Isop_0392 NC_014962.1 560104 561426 D InterPro IPR014338; KEGG: hau:Haur_4051 hypothetical protein; SPTR: Leucine-rich repeat-containing protein typical subtype; TIGRFAM: repeat-companion domain protein; TIGRFAM: repeat-companion domain TIGR02996; repeat-companion domain-containing protein 560104..561426 Isosphaera pallida ATCC 43644 10154498 YP_004177537.1 CDS Isop_0393 NC_014962.1 561665 563305 D KEGG: ani:AN8715.2 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 561665..563305 Isosphaera pallida ATCC 43644 10154499 YP_004177538.1 CDS Isop_0394 NC_014962.1 563677 564048 D KEGG: dya:Dyak_GE20054 GE20054 gene product from transcript GE20054-RA; SPTR: GE20054; hypothetical protein 563677..564048 Isosphaera pallida ATCC 43644 10154500 YP_004177539.1 CDS Isop_0395 NC_014962.1 564045 564272 D KEGG: srm:SRM_00401 conserved hypothetical protein, secreted; SPTR: Putative uncharacterized protein; PFAM: Cytochrome oxidase maturation protein cbb3-type; hypothetical protein 564045..564272 Isosphaera pallida ATCC 43644 10154501 YP_004177540.1 CDS Isop_0396 NC_014962.1 564269 565840 D COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR000883; KEGG: srm:SRM_00402 cytochrome c oxidase subunit 1; PFAM: cytochrome c oxidase subunit I; PRIAM: Cytochrome-c oxidase; SPTR: Putative cytochrome-c oxidase; PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; cytochrome-c oxidase 564269..565840 Isosphaera pallida ATCC 43644 10154502 YP_004177541.1 CDS Isop_0397 NC_014962.1 565837 566532 D COGs: COG2993 Cbb3-type cytochrome oxidase cytochrome c subunit; InterPro IPR003468: IPR009056; KEGG: sru:SRU_0323 cytochrome c oxidase, cbb3-type, subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; SPTR: Cytochrome c oxidase mono-heme subunit/FixO; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; cytochrome C oxidase mono-heme subunit/FixO 565837..566532 Isosphaera pallida ATCC 43644 10154503 YP_004177542.1 CDS Isop_0398 NC_014962.1 566529 567749 D InterPro IPR003088: IPR008168: IPR009056; KEGG: caa:Caka_0027 cytochrome c class I; PFAM: cytochrome c class I; SPTR: Cytochrome c class I; PFAM: Cytochrome c; class I cytochrome c 566529..567749 Isosphaera pallida ATCC 43644 10154504 YP_004177543.1 CDS Isop_0399 NC_014962.1 567961 570873 D COGs: COG2217 Cation transport ATPase; InterProIPR008250: IPR005834: IPR018303: IPR006416: IPR 001757; KEGG: caa:Caka_0015 heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; SPTR: Heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase 567961..570873 Isosphaera pallida ATCC 43644 10154505 YP_004177544.1 CDS Isop_0400 NC_014962.1 571042 576018 R KEGG: cpi:Cpin_4113 hypothetical protein; SPTR: Bacterial pre-peptidase C-terminal domain family; hypothetical protein complement(571042..576018) Isosphaera pallida ATCC 43644 10154506 YP_004177545.1 CDS Isop_0401 NC_014962.1 576531 578615 D COGs: COG1032 Fe-S oxidoreductase; InterPro IPR013704: IPR007197: IPR006638: IPR020612; KEGG: psl:Psta_1639 radical SAM domain protein; PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Radical SAM domain protein; PFAM: Domain of unknown function (DUF3362); Radical SAM superfamily; Radical SAM N-terminal; radical SAM protein 576531..578615 Isosphaera pallida ATCC 43644 10154507 YP_004177546.1 CDS Isop_0402 NC_014962.1 578937 579230 D InterPro IPR003735; KEGG: ele:Elen_1552 protein of unknown function DUF156; PFAM: protein of unknown function DUF156; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised BCR, COG1937; hypothetical protein 578937..579230 Isosphaera pallida ATCC 43644 10154508 YP_004177547.1 CDS Isop_0403 NC_014962.1 579235 579885 D COGs: COG4662 ABC-type tungstate transport system periplasmic component; InterPro IPR000515; KEGG: sti:Sthe_3396 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 579235..579885 Isosphaera pallida ATCC 43644 10154509 YP_004177548.1 CDS Isop_0404 NC_014962.1 579882 580610 D COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003439: IPR003593: IPR017871; KEGG: sti:Sthe_3397 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter; phosphate ABC transporter ATP-binding protein 579882..580610 Isosphaera pallida ATCC 43644 10154510 YP_004177549.1 CDS Isop_0405 NC_014962.1 580612 581442 D COGs: COG2998 ABC-type tungstate transport system permease component; KEGG: pth:PTH_0602 ABC-type tungstate transport system, permease component; SPTR: ABC-type tungstate transport system, permease component; ABC-type tungstate transport system, permease 580612..581442 Isosphaera pallida ATCC 43644 10154511 YP_004177550.1 CDS Isop_0406 NC_014962.1 581439 582767 D KEGG: dhd:Dhaf_1705 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 581439..582767 Isosphaera pallida ATCC 43644 10154512 YP_004177551.1 CDS Isop_0407 NC_014962.1 582764 583630 D InterPro IPR001048; KEGG: swo:Swol_2454 uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; SPTR: Aspartate/glutamate/uridylate kinase; PFAM: Amino acid kinase family; aspartate/glutamate/uridylate kinase 582764..583630 Isosphaera pallida ATCC 43644 10154513 YP_004177552.1 CDS Isop_0408 NC_014962.1 583620 584450 D COGs: COG0528 Uridylate kinase; InterPro IPR001048; KEGG: swo:Swol_2454 uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; SPTR: Uridylate kinase; PFAM: Amino acid kinase family; aspartate/glutamate/uridylate kinase 583620..584450 Isosphaera pallida ATCC 43644 10154514 YP_004177553.1 CDS Isop_0409 NC_014962.1 584573 587002 R InterPro IPR001330; KEGG: plm:Plim_0306 A-macroglobulin complement component; PFAM: Prenyltransferase/squalene oxidase; SPTR: A-macroglobulin complement component; prenyltransferase/squalene oxidase complement(584573..587002) Isosphaera pallida ATCC 43644 10154515 YP_004177554.1 CDS Isop_0410 NC_014962.1 587209 588465 R KEGG: cse:Cseg_3119 integral membrane sensor hybrid histidine kinase; SPTR: Putative uncharacterized protein; hypothetical protein complement(587209..588465) Isosphaera pallida ATCC 43644 10154516 YP_004177555.1 CDS Isop_0411 NC_014962.1 588817 589296 D KEGG: rcu:RCOM_1935260 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 588817..589296 Isosphaera pallida ATCC 43644 10154517 YP_004177556.1 CDS Isop_0412 NC_014962.1 589462 590586 D COGs: COG0714 MoxR-like ATPase; InterPro IPR011703: IPR003593: IPR016366; KEGG: psl:Psta_1557 ATPase associated with various cellular activities AAA_3; PFAM: ATPase associated with various cellular activities AAA_3; SMART: AAA ATPase; SPTR: MoxR protein; PFAM: ATPase family associated with various cellular activities (AAA); ATPase 589462..590586 Isosphaera pallida ATCC 43644 10154518 YP_004177557.1 CDS Isop_0413 NC_014962.1 590661 591572 D COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: psl:Psta_1558 von Willebrand factor type A; PFAM: protein of unknown function DUF58; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF58; hypothetical protein 590661..591572 Isosphaera pallida ATCC 43644 10154519 YP_004177558.1 CDS Isop_0414 NC_014962.1 591732 594026 D InterPro IPR011933; KEGG: psl:Psta_0478 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein; PFAM: Aerotolerance regulator N-terminal; TIGRFAM: N-terminal double-transmembrane domain; hypothetical protein 591732..594026 Isosphaera pallida ATCC 43644 10154520 YP_004177559.1 CDS Isop_0415 NC_014962.1 594034 596385 D InterPro IPR010768: IPR002035; KEGG: plm:Plim_2313 hypothetical protein; PFAM: protein of unknown function DUF1355; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1355); hypothetical protein 594034..596385 Isosphaera pallida ATCC 43644 10154521 YP_004177560.1 CDS Isop_0416 NC_014962.1 596459 597850 R COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterPro IPR000089: IPR004167: IPR001078: IPR003016; KEGG: sth:STH413 pyruvate dehydrogenase E2; PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; SPTR: Pyruvate dehydrogenase E2; PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; hypothetical protein complement(596459..597850) Isosphaera pallida ATCC 43644 10154522 YP_004177561.1 CDS Isop_0417 NC_014962.1 597989 599050 R COGs: COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit; InterPro IPR005475: IPR005476; KEGG: mxa:MXAN_4565 2-oxoisovalerate dehydrogenase complex, E1 component, beta subunit; PFAM: Transketolase domain-containing protein; Transketolase central region; PRIAM: Pyruvate dehydrogenase (acetyl-transferring); SPTR: 2-oxoisovalerate dehydrogenase complex, E1 component, beta subunit; PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; pyruvate dehydrogenase complement(597989..599050) Isosphaera pallida ATCC 43644 10154523 YP_004177562.1 CDS Isop_0418 NC_014962.1 599229 600332 R COGs: COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type alpha subunit; InterPro IPR001017; KEGG: mxa:MXAN_4564 2-oxoisovalerate dehydrogenase complex, E1 component, alpha subunit; PFAM: dehydrogenase E1 component; PRIAM: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring); SPTR: 2-oxoisovalerate dehydrogenase complex, E1 component, alpha subunit; PFAM: Dehydrogenase E1 component; 3-methyl-2-oxobutanoate dehydrogenase complement(599229..600332) Isosphaera pallida ATCC 43644 10154524 YP_004177563.1 CDS Isop_0419 NC_014962.1 600556 600738 D hypothetical protein 600556..600738 Isosphaera pallida ATCC 43644 10154525 YP_004177564.1 CDS Isop_0420 NC_014962.1 601113 601367 D KEGG: psl:Psta_2735 pyrrolo-quinoline quinone; SPTR: Pyrrolo-quinoline quinone; hypothetical protein 601113..601367 Isosphaera pallida ATCC 43644 10154526 YP_004177565.1 CDS Isop_0421 NC_014962.1 602112 604403 D COGs: COG3284 Transcriptional activator of acetoin/glycerol metabolism; InterProIPR003018: IPR002078: IPR002197: IPR003593: IPR 020441; KEGG: afw:Anae109_3045 fis family GAF modulated sigma54 specific transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase; SPTR: GAF modulated sigma54 specific transcriptional regulator, Fis family; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; GAF modulated Fis family sigma-54 specific transcriptional regulator 602112..604403 Isosphaera pallida ATCC 43644 10154527 YP_004177566.1 CDS Isop_0422 NC_014962.1 605001 606020 D COGs: COG1064 Zn-dependent alcohol dehydrogenase; InterPro IPR013154: IPR013149: IPR002328; KEGG: rca:Rcas_4434 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; SPTR: Alcohol dehydrogenase GroES domain protein; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; alcohol dehydrogenase GroES domain-containing protein 605001..606020 Isosphaera pallida ATCC 43644 10154528 YP_004177567.1 CDS Isop_0423 NC_014962.1 606178 607680 D COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590: IPR016160; KEGG: aba:Acid345_1381 aldehyde dehydrogenase (acceptor); PFAM: Aldehyde Dehydrogenase; SPTR: Aldehyde dehydrogenase (Acceptor); PFAM: Aldehyde dehydrogenase family; aldehyde dehydrogenase 606178..607680 Isosphaera pallida ATCC 43644 10154529 YP_004177568.1 CDS Isop_0424 NC_014962.1 607961 608629 D KEGG: act:ACLA_076560 integral membrane protein; SPTR: Integral membrane protein; hypothetical protein 607961..608629 Isosphaera pallida ATCC 43644 10154530 YP_004177569.1 CDS Isop_0425 NC_014962.1 608660 611197 R COGs: COG0464 ATPase of the AAA+ class; InterProIPR003338: IPR004201: IPR003959: IPR003593: IPR 003960: IPR005938; KEGG: mxa:MXAN_2773 AAA family ATPase; PFAM: AAA ATPase central domain protein; AAA ATPase VAT domain protein; cell division protein 48 CDC48 domain 2; PRIAM: Adenosinetriphosphatase; SMART: AAA ATPase; SPTR: ATPase, AAA family; TIGRFAM: AAA family ATPase, CDC48 subfamily; PFAM: ATPase family associated with various cellular activities (AAA); Cell division protein 48 (CDC48), N-terminal domain; Cell division protein 48 (CDC48), domain 2; TIGRFAM: AAA family ATPase, CDC48 subfamily; AAA ATPase complement(608660..611197) Isosphaera pallida ATCC 43644 10154531 YP_004177570.1 CDS Isop_0426 NC_014962.1 611194 611898 R KEGG: pin:Ping_1246 heat shock protein, HSP20 family protein; SPTR: Heat shock protein, HSP20 family protein; hypothetical protein complement(611194..611898) Isosphaera pallida ATCC 43644 10154532 YP_004177571.1 CDS Isop_0427 NC_014962.1 612060 613628 R COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR001789: IPR002078: IPR002197: IPR003593: IPR 020441; KEGG: ank:AnaeK_1971 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; Fis family two component sigma54 specific transcriptional regulator complement(612060..613628) Isosphaera pallida ATCC 43644 10154533 YP_004177572.1 CDS Isop_0428 NC_014962.1 613851 616376 R COGs: COG2217 Cation transport ATPase; InterProIPR006121: IPR008250: IPR005834: IPR018303: IPR 017969: IPR000150: IPR006403: IPR006416: IPR001757; KEGG: rsc:RCFBP_10117 copper transporting P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; SPTR: Cation-transporting atpase protein; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase complement(613851..616376) Isosphaera pallida ATCC 43644 10154534 YP_004177573.1 CDS Isop_0429 NC_014962.1 616636 618060 D COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: rba:RB4815 arylsulphatase A; PFAM: sulfatase; SPTR: Arylsulphatase A; PFAM: Sulfatase; sulfatase 616636..618060 Isosphaera pallida ATCC 43644 10154535 YP_004177574.1 CDS Isop_0430 NC_014962.1 618067 618300 D KEGG: cre:CHLREDRAFT_151536 hypothetical protein; SPTR: Predicted protein; hypothetical protein 618067..618300 Isosphaera pallida ATCC 43644 10154536 YP_004177575.1 CDS Isop_0431 NC_014962.1 618341 618877 R KEGG: psl:Psta_3507 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(618341..618877) Isosphaera pallida ATCC 43644 10154537 YP_004177576.1 CDS Isop_0432 NC_014962.1 619080 622271 R InterPro IPR013428: IPR013427: IPR009056; KEGG: psl:Psta_1994 membrane-bound dehydrogenase domain protein; SPTR: Membrane-bound dehydrogenase domain protein; TIGRFAM: membrane-bound dehydrogenase domain protein; heme-binding protein; PFAM: Cytochrome c; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type; membrane-bound dehydrogenase domain-containing protein complement(619080..622271) Isosphaera pallida ATCC 43644 10154538 YP_004177577.1 CDS Isop_0433 NC_014962.1 622770 624467 R COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterPro IPR007627: IPR007630: IPR014284: IPR000943; KEGG: psl:Psta_2560 RNA polymerase, sigma 32 subunit, RpoH; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-32 subunit RpoH complement(622770..624467) Isosphaera pallida ATCC 43644 10154539 YP_004177578.1 CDS Isop_0434 NC_014962.1 625762 626703 R KEGG: rba:RB7149 signal peptide; SPTR: Putative uncharacterized protein; hypothetical protein complement(625762..626703) Isosphaera pallida ATCC 43644 10154540 YP_004177579.1 CDS Isop_0435 NC_014962.1 626859 628259 R COGs: COG0515 Serine/threonine protein kinase; InterProIPR000253: IPR017442: IPR020635: IPR002290: IPR 017441: IPR008271: IPR000719; KEGG: sro:Sros_3456 serine/threonine protein kinase-like protein; PFAM: Serine/threonine-protein kinase-like domain; Forkhead-associated protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; Forkhead-associated protein; SPTR: Serine/threonine protein kinase-like protein; PFAM: Protein kinase domain; FHA domain; FHA domain-containing serine/threonine protein kinase complement(626859..628259) Isosphaera pallida ATCC 43644 10154541 YP_004177580.1 CDS Isop_0436 NC_014962.1 628543 629520 D COGs: COG2313 Uncharacterized protein involved in pigment biosynthesis; InterPro IPR007342; KEGG: rce:RC1_0645 indigoidine synthase A like protein; PFAM: Indigoidine synthase A family protein; SPTR: Pseudouridine-5'-phosphate glycosidase; PFAM: Indigoidine synthase A like protein; Indigoidine synthase A family protein 628543..629520 Isosphaera pallida ATCC 43644 10154542 YP_004177581.1 CDS Isop_0437 NC_014962.1 630120 630971 D InterPro IPR011138; KEGG: amu:Amuc_0986 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; SPTR: Succinate dehydrogenase (Or fumarate reductase) cytochrome b subunit, b558 family; TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; succinate dehydrogenase (or fumarate reductase) cytochrome subunit B, b558 family 630120..630971 Isosphaera pallida ATCC 43644 10154543 YP_004177582.1 CDS Isop_0438 NC_014962.1 631198 633126 D COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR003953: IPR004112: IPR010916: IPR011280; KEGG: chl:Chy400_2032 succinate dehydrogenase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: Succinate dehydrogenase or fumarate reductase, flavoprotein subunit; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup; nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein 631198..633126 Isosphaera pallida ATCC 43644 10154544 YP_004177583.1 CDS Isop_0439 NC_014962.1 633126 633941 D COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterPro IPR017900: IPR004489: IPR017896; KEGG: sro:Sros_8456 succinate dehydrogenase/fumarate reductase iron-sulfur subunit; SPTR: Succinate dehydrogenase/fumarate reductase iron-sulfur subunit; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; succinate dehydrogenase subunit B 633126..633941 Isosphaera pallida ATCC 43644 10154545 YP_004177584.1 CDS Isop_0440 NC_014962.1 634063 634608 D InterPro IPR011449: IPR013424; KEGG: lch:Lcho_2328 hypothetical protein; PFAM: protein of unknown function DUF1555; SPTR: Putative uncharacterized protein; PFAM: PEP-CTERM motif; TIGRFAM: PEP-CTERM putative exosortase interaction domain; hypothetical protein 634063..634608 Isosphaera pallida ATCC 43644 10154546 YP_004177585.1 CDS Isop_0441 NC_014962.1 634623 634931 R KEGG: ncr:NCU02592 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(634623..634931) Isosphaera pallida ATCC 43644 10154547 YP_004177586.1 CDS Isop_0442 NC_014962.1 635034 635318 R COGs: COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing); InterPro IPR003751; KEGG: psl:Psta_2371 carbon storage regulator, CsrA; PFAM: carbon storage regulator; SPTR: Probable carbon storage regulator; TIGRFAM: carbon storage regulator; PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA); carbon storage regulator CsrA complement(635034..635318) Isosphaera pallida ATCC 43644 10154548 YP_004177587.1 CDS Isop_0443 NC_014962.1 635575 636099 R COGs: COG1699 conserved hypothetical protein; InterPro IPR003775; KEGG: gsu:GSU3040 flagellar assembly protein FliW; PFAM: protein of unknown function DUF180; SPTR: Transmembrane protein; PFAM: FliW protein; hypothetical protein complement(635575..636099) Isosphaera pallida ATCC 43644 10154549 YP_004177588.1 CDS Isop_0444 NC_014962.1 636722 637939 R COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; KEGG: phe:Phep_0342 dipeptidyl aminopeptidase/acylaminoacyl-peptidase; SPTR: Putative uncharacterized protein; PFAM: Prolyl oligopeptidase family; dipeptidylaminopeptidase/acylaminoacyl- peptidase complement(636722..637939) Isosphaera pallida ATCC 43644 10154550 YP_004177589.1 CDS Isop_0445 NC_014962.1 637973 640093 R COGs: COG1523 Type II secretory pathway pullulanase PulA and related glycosidase; InterPro IPR004193: IPR006047: IPR006589: IPR011837; KEGG: dak:DaAHT2_1644 glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: glycogen debranching enzyme GlgX; isoamylase complement(637973..640093) Isosphaera pallida ATCC 43644 10154551 YP_004177590.1 CDS Isop_0446 NC_014962.1 640515 641945 D InterPro IPR010916; KEGG: dre:100330916 hypothetical protein LOC100330916; SPTR: Cell surface flocculin; hypothetical protein 640515..641945 Isosphaera pallida ATCC 43644 10154552 YP_004177591.1 CDS Isop_0447 NC_014962.1 642267 642512 D KEGG: rso:RS03706 transcription regulator protein; SPTR: Probable transcription regulator protein; hypothetical protein 642267..642512 Isosphaera pallida ATCC 43644 10154553 YP_004177592.1 CDS Isop_0448 NC_014962.1 642493 643794 D COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: afw:Anae109_1425 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase 642493..643794 Isosphaera pallida ATCC 43644 10154554 YP_004177593.1 CDS Isop_0449 NC_014962.1 643924 644997 D COGs: COG0416 Fatty acid/phospholipid biosynthesis enzyme; InterPro IPR003664: IPR012281; KEGG: plm:Plim_2567 fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; SPTR: Phosphate acyltransferase; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: Fatty acid synthesis protein; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; phosphate:acyl-(acyl carrier protein) acyltransferase 643924..644997 Isosphaera pallida ATCC 43644 10154555 YP_004177594.1 CDS Isop_0450 NC_014962.1 645138 646049 D COGs: COG0331 (acyl-carrier-protein) S-malonyltransferase; InterPro IPR014043: IPR004410; KEGG: psl:Psta_1725 malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; SPTR: Malonyl CoA-acyl carrier protein transacylase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; ACP S-malonyltransferase 645138..646049 Isosphaera pallida ATCC 43644 10154556 YP_004177595.1 CDS Isop_0451 NC_014962.1 646149 646931 D COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198: IPR020904: IPR011284: IPR002347; KEGG: psl:Psta_1726 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: 3-oxoacyl-(Acyl-carrier protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-(acyl-carrier-protein) reductase 646149..646931 Isosphaera pallida ATCC 43644 10154557 YP_004177596.1 CDS Isop_0452 NC_014962.1 647025 648866 R InterPro IPR012902: IPR001120; KEGG: plm:Plim_1302 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein complement(647025..648866) Isosphaera pallida ATCC 43644 10154558 YP_004177597.1 CDS Isop_0453 NC_014962.1 648877 649086 R hypothetical protein complement(648877..649086) Isosphaera pallida ATCC 43644 10154559 YP_004177598.1 CDS Isop_0454 NC_014962.1 649190 649420 R KEGG: ptr:749912 hypothetical protein LOC749912; SPTR: Copper-exporting ATPase; hypothetical protein complement(649190..649420) Isosphaera pallida ATCC 43644 10154560 YP_004177599.1 CDS Isop_0455 NC_014962.1 649504 650046 R KEGG: cat:CA2559_07901 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(649504..650046) Isosphaera pallida ATCC 43644 10154561 YP_004177600.1 CDS Isop_0456 NC_014962.1 650384 650566 R KEGG: act:ACLA_046450 IKI3 family protein; IKI3 family protein complement(650384..650566) Isosphaera pallida ATCC 43644 10154562 YP_004177601.1 CDS Isop_0457 NC_014962.1 650817 651596 R KEGG: dpe:Dper_GL18878 GL18878 gene product from transcript GL18878-RA; SPTR: GA17967; hypothetical protein complement(650817..651596) Isosphaera pallida ATCC 43644 10154563 YP_004177602.1 CDS Isop_0458 NC_014962.1 651598 652590 R COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR001544; KEGG: tkm:TK90_1969 D-amino-acid transaminase; PFAM: aminotransferase class IV; SPTR: D-amino-acid transaminase; PFAM: Aminotransferase class IV; TIGRFAM: D-amino acid aminotransferase; class IV aminotransferase complement(651598..652590) Isosphaera pallida ATCC 43644 10154564 YP_004177603.1 CDS Isop_0459 NC_014962.1 652921 653253 D COGs: COG3118 Thioredoxin domain-containing protein; InterProIPR013766: IPR017937: IPR005746: IPR006662: IPR 017936; KEGG: tal:Thal_1357 thioredoxin; PFAM: Thioredoxin domain-containing protein; SPTR: Thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin; TIGRFAM: thioredoxin; thioredoxin 652921..653253 Isosphaera pallida ATCC 43644 10154565 YP_004177604.1 CDS Isop_0460 NC_014962.1 653402 654139 D COGs: COG0135 Phosphoribosylanthranilate isomerase; InterPro IPR001240; KEGG: gme:Gmet_2492 N-(5'-phosphoribosyl)anthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); PRIAM: Phosphoribosylanthranilate isomerase; SPTR: N-(5'-phosphoribosyl)anthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase; phosphoribosylanthranilate isomerase 653402..654139 Isosphaera pallida ATCC 43644 10154566 YP_004177605.1 CDS Isop_0461 NC_014962.1 654206 656896 D COGs: COG0826 Collagenase and related protease; InterPro IPR001539; KEGG: psl:Psta_3009 peptidase U32; PFAM: peptidase U32; SPTR: Peptidase U32; PFAM: Collagenase; Peptidase family U32; peptidase U32 654206..656896 Isosphaera pallida ATCC 43644 10154567 YP_004177606.1 CDS Isop_0462 NC_014962.1 657189 658505 R COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR006311; KEGG: plm:Plim_1207 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; SPTR: Probable dehydrogenase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase domain-containing protein complement(657189..658505) Isosphaera pallida ATCC 43644 10154568 YP_004177607.1 CDS Isop_0463 NC_014962.1 658891 659715 R COGs: COG1540 conserved hypothetical protein; InterPro IPR005501; KEGG: bcv:Bcav_1377 LamB/YcsF family protein; PFAM: LamB/YcsF family protein; SPTR: LamB/YcsF family protein; PFAM: LamB/YcsF family; LamB/YcsF family protein complement(658891..659715) Isosphaera pallida ATCC 43644 10154569 YP_004177608.1 CDS Isop_0464 NC_014962.1 659712 660392 R COGs: COG2049 Allophanate hydrolase subunit 1; InterPro IPR003833; KEGG: nde:NIDE1154 putative allophanate hydrolase subunit 1; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; SPTR: Putative uncharacterized protein; PFAM: Allophanate hydrolase subunit 1; TIGRFAM: conserved hypothetical protein TIGR00370; allophanate hydrolase subunit 1 complement(659712..660392) Isosphaera pallida ATCC 43644 10154570 YP_004177609.1 CDS Isop_0465 NC_014962.1 660637 662229 D KEGG: rba:RB13032 putative permease; SPTR: Putative uncharacterized protein; PFAM: Predicted permease; hypothetical protein 660637..662229 Isosphaera pallida ATCC 43644 10154571 YP_004177610.1 CDS Isop_0466 NC_014962.1 662481 663878 D KEGG: plm:Plim_0653 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 662481..663878 Isosphaera pallida ATCC 43644 10154572 YP_004177611.1 CDS Isop_0467 NC_014962.1 663981 665828 D COGs: COG0449 Glucosamine 6-phosphate synthetase contains amidotransferase and phosphosugar isomerase domains; InterPro IPR000583: IPR001347: IPR005855: IPR017932; KEGG: plm:Plim_1342 glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: sugar isomerase (SIS); glutamine amidotransferase class-II; SPTR: Glucosamine/fructose-6-phosphate aminotransferase, isomerizing; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing); glutamine--fructose-6-phosphate transaminase 663981..665828 Isosphaera pallida ATCC 43644 10154573 YP_004177612.1 CDS Isop_0468 NC_014962.1 665846 667465 R COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR001173: IPR013216; KEGG: plm:Plim_3541 glycosyl transferase family 2; PFAM: Methyltransferase type 11; glycosyl transferase family 2; SPTR: Glycosyl transferase, family 2; PFAM: Methyltransferase domain; Glycosyl transferase family 2; type 11 methyltransferase complement(665846..667465) Isosphaera pallida ATCC 43644 10154574 YP_004177613.1 CDS Isop_0469 NC_014962.1 667483 668193 R COGs: COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase; InterPro IPR003382; KEGG: tad:TRIADDRAFT_49959 hypothetical protein; PFAM: flavoprotein; PRIAM: Phosphopantothenoylcysteine decarboxylase; SPTR: Putative uncharacterized protein; PFAM: Flavoprotein; phosphopantothenoylcysteine decarboxylase complement(667483..668193) Isosphaera pallida ATCC 43644 10154575 YP_004177614.1 CDS Isop_0470 NC_014962.1 668403 668648 R KEGG: hne:HNE_1503 Tat pathway signal sequence domain-containing protein; hypothetical protein complement(668403..668648) Isosphaera pallida ATCC 43644 10154576 YP_004177615.1 CDS Isop_0471 NC_014962.1 669325 670755 D COGs: COG0124 Histidyl-tRNA synthetase; InterProIPR002314: IPR004154: IPR004516: IPR015807: IPR 006195; KEGG: rba:RB251 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; PRIAM: Histidine--tRNA ligase; SPTR: Histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase; histidyl-tRNA synthetase 669325..670755 Isosphaera pallida ATCC 43644 10154577 YP_004177616.1 CDS Isop_0472 NC_014962.1 670752 672521 D COGs: COG0124 Histidyl-tRNA synthetase; InterPro IPR002314: IPR006195; KEGG: hau:Haur_3835 histidine--tRNA ligase; PFAM: tRNA synthetase class II (G H P and S); SPTR: Histidine--tRNA ligase; PFAM: tRNA synthetase class II core domain (G, H, P, S and T); tRNA synthetase class II (G H P and S) 670752..672521 Isosphaera pallida ATCC 43644 10154578 YP_004177617.1 CDS Isop_0473 NC_014962.1 672527 673663 D COGs: COG0040 ATP phosphoribosyltransferase; InterPro IPR013820: IPR018198; KEGG: hau:Haur_2634 ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region; PRIAM: ATP phosphoribosyltransferase; SPTR: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase; ATP phosphoribosyltransferase 672527..673663 Isosphaera pallida ATCC 43644 10154579 YP_004177618.1 CDS Isop_0474 NC_014962.1 673712 674566 D COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: rba:RB2626 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: Putative uncharacterized protein; PFAM: Methyltransferase domain; type 11 methyltransferase 673712..674566 Isosphaera pallida ATCC 43644 10154580 YP_004177619.1 CDS Isop_0475 NC_014962.1 675151 675669 D COGs: COG0290 Translation initiation factor 3 (IF-3); InterPro IPR019814: IPR019815: IPR019813: IPR001288; KEGG: psl:Psta_1536 translation initiation factor IF-3; PFAM: Translation initiation factor 3-like; SPTR: Translation initiation factor IF-3; TIGRFAM: translation initiation factor IF-3; PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3; translation initiation factor 3 (bIF-3) 675151..675669 Isosphaera pallida ATCC 43644 10154581 YP_004177620.1 CDS Isop_0476 NC_014962.1 676123 676401 D InterPro IPR021137: IPR018265: IPR001706; KEGG: pfr:PFREUD_14060 50S ribosomal protein L35; PFAM: Ribosomal protein L35; SPTR: 50S ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; 50S ribosomal protein L35 676123..676401 Isosphaera pallida ATCC 43644 10154582 YP_004177621.1 CDS Isop_0477 NC_014962.1 676723 677115 D COGs: COG0292 Ribosomal protein L20; InterPro IPR005813; KEGG: psl:Psta_0380 ribosomal protein L20; PFAM: ribosomal protein L20; SPTR: 50S ribosomal protein L20; TIGRFAM: ribosomal protein L20; PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20; 50S ribosomal protein L20 676723..677115 Isosphaera pallida ATCC 43644 10154583 YP_004177622.1 CDS Isop_0478 NC_014962.1 677353 678375 D COGs: COG0016 Phenylalanyl-tRNA synthetase alpha subunit; InterPro IPR002319: IPR004529: IPR006195; KEGG: psl:Psta_0379 phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; SPTR: Phenylalanyl-tRNA synthetase, alpha subunit; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; phenylalanyl-tRNA synthetase subunit alpha 677353..678375 Isosphaera pallida ATCC 43644 10154584 YP_004177623.1 CDS Isop_0479 NC_014962.1 678395 679246 R COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: psl:Psta_2472 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: Phospholipid/glycerol acyltransferase; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; phospholipid/glycerol acyltransferase complement(678395..679246) Isosphaera pallida ATCC 43644 10154585 YP_004177624.1 CDS Isop_0480 NC_014962.1 679397 680743 R InterPro IPR019775; KEGG: rca:Rcas_1659 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(679397..680743) Isosphaera pallida ATCC 43644 10154586 YP_004177625.1 CDS Isop_0481 NC_014962.1 681555 682550 D KEGG: cre:CHLREDRAFT_144070 flagellar associated protein; SPTR: Flagellar associated protein; hypothetical protein 681555..682550 Isosphaera pallida ATCC 43644 10154587 YP_004177626.1 CDS Isop_0482 NC_014962.1 682773 683891 D InterPro IPR003590: IPR014338; KEGG: amd:AMED_5837 leucine-rich repeat-containing protein; SMART: Leucine-rich repeat, ribonuclease inhibitor subtype; SPTR: Putative uncharacterized protein; TIGRFAM: repeat-companion domain protein; TIGRFAM: repeat-companion domain TIGR02996; repeat-companion domain-containing protein 682773..683891 Isosphaera pallida ATCC 43644 10154588 YP_004177627.1 CDS Isop_0483 NC_014962.1 684103 684585 R COGs: COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); InterPro IPR008331: IPR002177; KEGG: psl:Psta_1613 ferritin Dps family protein; PFAM: Ferritin Dps family protein; SPTR: Ferritin Dps family protein; PFAM: Ferritin-like domain; ferritin Dps family protein complement(684103..684585) Isosphaera pallida ATCC 43644 10154589 YP_004177628.1 CDS Isop_0484 NC_014962.1 684727 686742 R COGs: COG0308 Aminopeptidase N; InterPro IPR014782: IPR015211; KEGG: amc:MADE_03140 putative cold-active aminopeptidase; secreted using a signal peptide; PFAM: Peptidase M1 membrane alanine aminopeptidase; Leukotriene A4 hydrolase; SPTR: Peptidase M1 membrane alanine aminopeptidase; PFAM: Leukotriene A4 hydrolase, C-terminal; Peptidase family M1; peptidase M1 membrane alanine aminopeptidase complement(684727..686742) Isosphaera pallida ATCC 43644 10154590 YP_004177629.1 CDS Isop_0485 NC_014962.1 686739 688322 R KEGG: sus:Acid_1892 isochorismatase hydrolase; SPTR: Isochorismatase hydrolase; PFAM: Isochorismatase family; Trehalose utilisation; hypothetical protein complement(686739..688322) Isosphaera pallida ATCC 43644 10154591 YP_004177630.1 CDS Isop_0486 NC_014962.1 688409 690763 R InterPro IPR002035: IPR017802; KEGG: plm:Plim_0632 hypothetical protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: Putative uncharacterized protein; TIGRFAM: VWFA-related Acidobacterial domain protein; PFAM: von Willebrand factor type A domain; TIGRFAM: VWFA-related Acidobacterial domain; VWFA-like domain-containing protein complement(688409..690763) Isosphaera pallida ATCC 43644 10154592 YP_004177631.1 CDS Isop_0487 NC_014962.1 690767 692461 R InterPro IPR000253; KEGG: pic:PICST_67887 hypothetical protein; PFAM: Forkhead-associated protein; SPTR: Predicted protein; PFAM: FHA domain; forkhead-associated protein complement(690767..692461) Isosphaera pallida ATCC 43644 10154593 YP_004177632.1 CDS Isop_0488 NC_014962.1 692768 693394 D KEGG: cai:Caci_6850 type IV secretory pathway VirD4 protein-like protein; SPTR: Type IV secretory pathway VirD4 protein-like protein; hypothetical protein 692768..693394 Isosphaera pallida ATCC 43644 10154594 YP_004177633.1 CDS Isop_0489 NC_014962.1 693513 694634 D COGs: COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenase large terminal subunit; InterPro IPR017941: IPR001663; KEGG: chl:Chy400_2532 Rieske (2Fe-2S) domain protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: Rieske (2Fe-2S) domain protein; PFAM: Rieske [2Fe-2S] domain; Rieske (2Fe-2S) domain-containing protein 693513..694634 Isosphaera pallida ATCC 43644 10154595 YP_004177634.1 CDS Isop_0490 NC_014962.1 694648 695565 R KEGG: mac:MA3330 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(694648..695565) Isosphaera pallida ATCC 43644 10154596 YP_004177635.1 CDS Isop_0491 NC_014962.1 695714 697885 R COGs: COG1331 Highly conserved protein containing a thioredoxin domain; KEGG: psl:Psta_0467 protein of unknown function DUF255; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function, DUF255; hypothetical protein complement(695714..697885) Isosphaera pallida ATCC 43644 10154597 YP_004177636.1 CDS Isop_0492 NC_014962.1 698010 698816 R COGs: COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; InterPro IPR006148; KEGG: gym:GYMC10_1212 glucosamine-6-phosphate deaminase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; SPTR: Glucosamine/galactosamine-6-phosphate isomerase; PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; glucosamine/galactosamine-6-phosphate isomerase complement(698010..698816) Isosphaera pallida ATCC 43644 10154598 YP_004177637.1 CDS Isop_0493 NC_014962.1 699035 699802 D KEGG: bte:BTH_II0854 ubiquitin-specific proteinase 31, putative; SPTR: Ubiquitin-specific proteinase 31, putative; hypothetical protein 699035..699802 Isosphaera pallida ATCC 43644 10154599 YP_004177638.1 CDS Isop_0494 NC_014962.1 700025 700987 D InterPro IPR008538; KEGG: rca:Rcas_2194 hypothetical protein; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF820); hypothetical protein 700025..700987 Isosphaera pallida ATCC 43644 10154600 YP_004177639.1 CDS Isop_0495 NC_014962.1 701035 704181 R InterPro IPR011444: IPR009056; KEGG: rba:RB6511 hypothetical protein; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Planctomycete cytochrome C; Protein of unknown function (DUF1549); Protein of unknown function (DUF1553); hypothetical protein complement(701035..704181) Isosphaera pallida ATCC 43644 10154601 YP_004177640.1 CDS Isop_0496 NC_014962.1 704233 705246 R COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR002942: IPR006145: IPR006225; KEGG: sds:SDEG_0791 ribosomal large subunit pseudouridine synthase D; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: Pseudouridine synthase; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; RluA family pseudouridine synthase complement(704233..705246) Isosphaera pallida ATCC 43644 10154602 YP_004177641.1 CDS Isop_0497 NC_014962.1 705275 706252 D COGs: COG0483 fructose-1 6-bisphosphatase of inositol monophosphatase family; InterPro IPR000760; KEGG: chl:Chy400_3622 inositol-phosphate phosphatase; PFAM: inositol monophosphatase; SPTR: Inositol-phosphate phosphatase; PFAM: Inositol monophosphatase family; inositol monophosphatase 705275..706252 Isosphaera pallida ATCC 43644 10154603 YP_004177642.1 CDS Isop_0498 NC_014962.1 706361 706846 D KEGG: lbz:LbrM27_V2.1500 hypothetical protein; SPTR: Paramyosin; hypothetical protein 706361..706846 Isosphaera pallida ATCC 43644 10154604 YP_004177643.1 CDS Isop_0499 NC_014962.1 706967 707509 D InterPro IPR017504; KEGG: cmi:CMM_1969 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Planctomycetes uncharacterized domain TIGR03067; hypothetical protein 706967..707509 Isosphaera pallida ATCC 43644 10154605 YP_004177644.1 CDS Isop_0500 NC_014962.1 707706 708347 D InterPro IPR014284; KEGG: clj:CLJU_c27510 putative RNA polymerase sigma factor; SPTR: RNA polymerase sigma factor SigD; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: ECF sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 familyRNA polymerase sigma factor 707706..708347 Isosphaera pallida ATCC 43644 10154606 YP_004177645.1 CDS Isop_0501 NC_014962.1 708549 711905 D COGs: COG0515 Serine/threonine protein kinase; InterProIPR017442: IPR002290: IPR017441: IPR008271: IPR 000719; KEGG: rba:RB5593 serine/threonine-protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; SPTR: Serine/threonine-protein kinase; PFAM: Protein kinase domain; serine/threonine protein kinase 708549..711905 Isosphaera pallida ATCC 43644 10154607 YP_004177646.1 CDS Isop_0502 NC_014962.1 711877 713322 D COGs: COG0153 Galactokinase; InterProIPR019539: IPR006204: IPR013750: IPR000705: IPR 006203: IPR006206; KEGG: rrs:RoseRS_3819 galactokinase; PFAM: Galactokinase galactose-binding domain; GHMP kinase; GHMP kinase domain protein; SPTR: Galactokinase; TIGRFAM: galactokinase; PFAM: Galactokinase galactose-binding signature; GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: galactokinase; galactokinase 711877..713322 Isosphaera pallida ATCC 43644 10154608 YP_004177647.1 CDS Isop_0503 NC_014962.1 713308 714228 R COGs: COG0846 NAD-dependent protein deacetylase SIR2 family; InterPro IPR003000; KEGG: svi:Svir_35400 NAD-dependent protein deacetylase, SIR2 family; PFAM: Silent information regulator protein Sir2; SPTR: NAD-dependent protein deacetylase, SIR2 family; PFAM: Sir2 family; silent information regulator protein Sir2 complement(713308..714228) Isosphaera pallida ATCC 43644 10154609 YP_004177648.1 CDS Isop_0504 NC_014962.1 714306 715337 R COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: chl:Chy400_2903 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family; NAD-dependent epimerase/dehydratase complement(714306..715337) Isosphaera pallida ATCC 43644 10154610 YP_004177649.1 CDS Isop_0507 NC_014962.1 717790 719373 R InterPro IPR001611: IPR014338; KEGG: hau:Haur_4051 hypothetical protein; SPTR: Leucine-rich repeat-containing protein typical subtype; TIGRFAM: repeat-companion domain protein; PFAM: Leucine Rich Repeat; TIGRFAM: repeat-companion domain TIGR02996; repeat-companion domain-containing protein complement(717790..719373) Isosphaera pallida ATCC 43644 10154613 YP_004177650.1 CDS Isop_0508 NC_014962.1 719677 721692 R COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing); InterPro IPR000583: IPR001962: IPR006426: IPR017932; KEGG: psl:Psta_1424 asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II; SPTR: Asparagine synthetase [glutamine-hydrolyzing] 1; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); asparagine synthase complement(719677..721692) Isosphaera pallida ATCC 43644 10154614 YP_004177651.1 CDS Isop_0509 NC_014962.1 721939 723357 D KEGG: plm:Plim_2156 transmembrane prediction; SPTR: Putative uncharacterized protein; hypothetical protein 721939..723357 Isosphaera pallida ATCC 43644 10154615 YP_004177652.1 CDS Isop_0510 NC_014962.1 723397 725454 R COGs: COG1518 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR002729: IPR013343; KEGG: tgr:Tgr7_2433 CRISPR-associated Cas1/Cas4 family protein; PFAM: protein of unknown function DUF48; SPTR: CRISPR-associated protein Cas1/Cas4; TIGRFAM: CRISPR-associated protein Cas1; CRISPR-associated protein Cas4; PFAM: Domain of unknown function DUF83; CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated protein Cas4; CRISPR-associated endonuclease Cas1; CRISPR-associated protein Cas1 complement(723397..725454) Isosphaera pallida ATCC 43644 10154616 YP_004177653.1 CDS Isop_0511 NC_014962.1 725486 725779 R InterPro IPR021127; KEGG: hoh:Hoch_4853 CRISPR-associated protein Cas2; SPTR: Putative uncharacterized protein; TIGRFAM: CRISPR-associated protein Cas2; PFAM: CRISPR associated protein Cas2; TIGRFAM: CRISPR-associated endoribonuclease Cas2; CRISPR-associated protein Cas2 complement(725486..725779) Isosphaera pallida ATCC 43644 10154617 YP_004177654.1 CDS Isop_0512 NC_014962.1 725851 726969 R InterPro IPR019089; KEGG: hoh:Hoch_4849 hypothetical protein; PFAM: CRISPR-associated protein, GSU0054; SPTR: Putative uncharacterized protein; manually curated; PFAM: CRISPR-associated protein, GSU0054 family (Cas_GSU0054); CRISPR-associated protein complement(725851..726969) Isosphaera pallida ATCC 43644 10154618 YP_004177655.1 CDS Isop_0513 NC_014962.1 727006 727551 D InterPro IPR005650; KEGG: hoh:Hoch_4716 transcriptional repressor, CopY family; PFAM: Penicillinase repressor; SPTR: Transcriptional repressor, CopY family protein; PFAM: Penicillinase repressor; penicillinase repressor 727006..727551 Isosphaera pallida ATCC 43644 10154619 YP_004177656.1 CDS Isop_0514 NC_014962.1 727954 728532 R COGs: COG1259 conserved hypothetical protein; InterPro IPR003729; KEGG: plm:Plim_2219 protein of unknown function DUF151; PFAM: protein of unknown function DUF151; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised ACR, COG1259; hypothetical protein complement(727954..728532) Isosphaera pallida ATCC 43644 10154621 YP_004177657.1 CDS Isop_0515 NC_014962.1 728660 730414 R InterPro IPR004993; KEGG: plm:Plim_0953 GH3 auxin-responsive promoter; PFAM: GH3 auxin-responsive promoter; SPTR: GH3 auxin-responsive promoter; PFAM: GH3 auxin-responsive promoter; GH3 auxin-responsive promoter complement(728660..730414) Isosphaera pallida ATCC 43644 10154622 YP_004177658.1 CDS Isop_0516 NC_014962.1 730572 731774 R KEGG: plm:Plim_3438 dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein; SPTR: Dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein; PFAM: Prolyl oligopeptidase family; hypothetical protein complement(730572..731774) Isosphaera pallida ATCC 43644 10154623 YP_004177659.1 CDS Isop_0517 NC_014962.1 731921 733210 R COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR014030: IPR014031: IPR017441: IPR017568; KEGG: plm:Plim_3120 3-oxoacyl-(acyl-carrier-protein) synthase 2; PFAM: Beta-ketoacyl synthase; SPTR: 3-oxoacyl-(Acyl-carrier-protein) synthase 2; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II; 3-oxoacyl-(acyl-carrier-protein) synthase II complement(731921..733210) Isosphaera pallida ATCC 43644 10154624 YP_004177660.1 CDS Isop_0518 NC_014962.1 733377 734702 R COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR014030: IPR014031; KEGG: plm:Plim_2562 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase; SPTR: 3-oxoacyl-(Acyl carrier protein) synthase; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; beta-ketoacyl synthase complement(733377..734702) Isosphaera pallida ATCC 43644 10154625 YP_004177661.1 CDS Isop_0519 NC_014962.1 734917 735462 R COGs: COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase; InterPro IPR013114; KEGG: plm:Plim_3121 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; SPTR: Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabA/FabZ; PFAM: FabA-like domain; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ complement(734917..735462) Isosphaera pallida ATCC 43644 10154626 YP_004177662.1 CDS Isop_0520 NC_014962.1 735662 736048 R InterPro IPR006163: IPR009081; KEGG: plm:Plim_3122 phosphopantetheine-binding protein; PFAM: phosphopantetheine-binding; SPTR: Probable acyl carrier protein; PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein; phosphopantetheine-binding protein complement(735662..736048) Isosphaera pallida ATCC 43644 10154627 YP_004177663.1 CDS Isop_0521 NC_014962.1 736276 736773 R COGs: COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase; InterPro IPR013114; KEGG: plm:Plim_3124 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; SPTR: Probable hydroxymyristoyl-(Acyl carrier protein) dehydratase; PFAM: FabA-like domain; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ complement(736276..736773) Isosphaera pallida ATCC 43644 10154628 YP_004177664.1 CDS Isop_0522 NC_014962.1 737249 739369 D InterPro IPR002202; KEGG: tro:trd_0931 acylaminoacyl-peptidase; SPTR: Acylaminoacyl-peptidase; PFAM: WD40-like Beta Propeller Repeat; hypothetical protein 737249..739369 Isosphaera pallida ATCC 43644 10154629 YP_004177665.1 CDS Isop_0523 NC_014962.1 739437 740366 R COGs: COG2037 Formylmethanofuran:tetrahydromethanopterin formyltransferase; InterPro IPR002770: IPR014053; KEGG: plm:Plim_0767 formylmethanofuran/tetrahydromethanopterin N-formyltransferase; PFAM: formylmethanofuran: tetrahydromethanopterin formyltransferase (Ftr); PRIAM: Formylmethanofuran--tetrahydromethanopterin N-formyltransferase; SPTR: Formyltransferase/hydrolase complex subunit D; TIGRFAM: formylmethanofuran/tetrahydromethanopterin N-formyltransferase; PFAM: FTR, proximal lobe; lobe; TIGRFAM: formylmethanofuran--tetrahydromethanopterin N-formyltransferase; formylmethanofuran-tetrahydromethanopterin formyltransferase complement(739437..740366) Isosphaera pallida ATCC 43644 10154630 YP_004177666.1 CDS Isop_0524 NC_014962.1 740363 742174 R COGs: COG1229 Formylmethanofuran dehydrogenase subunit A; InterPro IPR013108: IPR012027; KEGG: psl:Psta_0063 formylmethanofuran dehydrogenase subunit A; PFAM: Amidohydrolase 3; SPTR: Formylmethanofuran dehydrogenase subunit A; TIGRFAM: formylmethanofuran dehydrogenase subunit A; PFAM: Amidohydrolase family; TIGRFAM: formylmethanofuran dehydrogenase subunit A; formylmethanofuran dehydrogenase subunit A complement(740363..742174) Isosphaera pallida ATCC 43644 10154631 YP_004177667.1 CDS Isop_0525 NC_014962.1 742235 743953 R COGs: COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful); InterPro IPR011607: IPR013982: IPR002695; KEGG: plm:Plim_1423 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein; PRIAM: Phosphoribosylaminoimidazolecarboxamide formyltransferase; SMART: AICARFT/IMPCHase bienzyme formylation region; SPTR: Phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase complement(742235..743953) Isosphaera pallida ATCC 43644 10154632 YP_004177668.1 CDS Isop_0526 NC_014962.1 744173 745189 R KEGG: psl:Psta_0848 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(744173..745189) Isosphaera pallida ATCC 43644 10154633 YP_004177669.1 CDS Isop_0527 NC_014962.1 745454 746236 R COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002198: IPR002347; KEGG: psl:Psta_0898 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Oxidoreductase, short-chain dehydrogenase/reductase family protein; PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(745454..746236) Isosphaera pallida ATCC 43644 10154634 YP_004177670.1 CDS Isop_0528 NC_014962.1 746540 748108 R InterPro IPR000209; KEGG: cyt:cce_1400 hypothetical protein; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: Major intracellular serine protease; PFAM: Subtilase family; peptidase S8 and S53 subtilisin kexin sedolisin complement(746540..748108) Isosphaera pallida ATCC 43644 10154635 YP_004177671.1 CDS Isop_0529 NC_014962.1 748183 748773 D KEGG: mgl:MGL_2709 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 748183..748773 Isosphaera pallida ATCC 43644 10154636 YP_004177672.1 CDS Isop_0530 NC_014962.1 748718 749485 D COGs: COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; InterPro IPR003329: IPR004528; KEGG: psl:Psta_0160 3-deoxy-D-manno-octulosonatecytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; PRIAM: 3-deoxy-manno-octulosonate cytidylyltransferase; SPTR: 3-deoxy-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; 3-deoxy-D-manno-octulosonate cytidylyltransferase 748718..749485 Isosphaera pallida ATCC 43644 10154637 YP_004177673.1 CDS Isop_0531 NC_014962.1 750014 750358 D KEGG: cin:100177691 similar to nuclear receptor corepressor; SPTR: TetR-family transcriptional regulator; hypothetical protein 750014..750358 Isosphaera pallida ATCC 43644 10154638 YP_004177674.1 CDS Isop_0532 NC_014962.1 750413 751570 R COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: psl:Psta_4220 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Putative glycosyl transferase (WbnE); PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase complement(750413..751570) Isosphaera pallida ATCC 43644 10154639 YP_004177675.1 CDS Isop_0533 NC_014962.1 751797 752675 D COGs: COG0483 fructose-1 6-bisphosphatase of inositol monophosphatase family; InterPro IPR000760: IPR020583: IPR020550; KEGG: plm:Plim_1820 inositol monophosphatase; PFAM: inositol monophosphatase; SPTR: Inositol monophosphatase; PFAM: Inositol monophosphatase family; inositol monophosphatase 751797..752675 Isosphaera pallida ATCC 43644 10154640 YP_004177676.1 CDS Isop_0534 NC_014962.1 752994 756869 D KEGG: mdo:100028759 similar to Sfi1 homolog, spindle assembly associated (yeast); SPTR: Chloride channel, putative; hypothetical protein 752994..756869 Isosphaera pallida ATCC 43644 10154641 YP_004177677.1 CDS Isop_0535 NC_014962.1 757021 758649 D COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR006805: IPR015890: IPR005256: IPR019999; KEGG: psl:Psta_3829 anthranilate synthase component I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; PRIAM: Anthranilate synthase; SPTR: Anthranilate synthase component I; TIGRFAM: anthranilate synthase component I; PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: anthranilate synthase component I, non-proteobacterial lineages; anthranilate synthase, component I 757021..758649 Isosphaera pallida ATCC 43644 10154642 YP_004177678.1 CDS Isop_0536 NC_014962.1 758646 760811 D KEGG: scl:sce6932 hypothetical protein; SPTR: Myosin tail region-interacting protein MTI1; hypothetical protein 758646..760811 Isosphaera pallida ATCC 43644 10154643 YP_004177679.1 CDS Isop_0537 NC_014962.1 760915 761865 R InterPro IPR003590: IPR014338; KEGG: hau:Haur_4051 hypothetical protein; SPTR: Leucine-rich repeat-containing protein typical subtype; TIGRFAM: repeat-companion domain protein; TIGRFAM: repeat-companion domain TIGR02996; repeat-companion domain-containing protein complement(760915..761865) Isosphaera pallida ATCC 43644 10154644 YP_004177680.1 CDS Isop_0538 NC_014962.1 761868 762077 R KEGG: cfa:478778 xin actin-binding repeat containing 2; SPTR: Putative uncharacterized protein Xirp2; hypothetical protein complement(761868..762077) Isosphaera pallida ATCC 43644 10154645 YP_004177681.1 CDS Isop_0539 NC_014962.1 762149 763792 R KEGG: mxa:MXAN_2893 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(762149..763792) Isosphaera pallida ATCC 43644 10154646 YP_004177682.1 CDS Isop_0540 NC_014962.1 763868 764929 R COGs: COG0714 MoxR-like ATPase; InterPro IPR011704: IPR003593; KEGG: mxa:MXAN_2895 AAA family ATPase; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; SPTR: ATPase, AAA family; PFAM: AAA domain (dynein-related subfamily); ATPase complement(763868..764929) Isosphaera pallida ATCC 43644 10154647 YP_004177683.1 CDS Isop_0541 NC_014962.1 765035 768916 R KEGG: mxa:MXAN_2896 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(765035..768916) Isosphaera pallida ATCC 43644 10154648 YP_004177684.1 CDS Isop_0542 NC_014962.1 768982 769260 R KEGG: mxa:MXAN_2897 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(768982..769260) Isosphaera pallida ATCC 43644 10154649 YP_004177685.1 CDS Isop_0543 NC_014962.1 769366 771618 R COGs: COG0465 ATP-dependent Zn protease; InterPro IPR003959: IPR000642: IPR003593: IPR003960; KEGG: mxa:MXAN_2898 ATP-dependent metalloprotease FtsH; PFAM: AAA ATPase central domain protein; peptidase M41; SMART: AAA ATPase; SPTR: ATP-dependent metalloprotease, FtsH family; PFAM: Peptidase family M41; ATPase family associated with various cellular activities (AAA); AAA ATPase complement(769366..771618) Isosphaera pallida ATCC 43644 10154650 YP_004177686.1 CDS Isop_0544 NC_014962.1 771851 772441 R KEGG: mxa:MXAN_2899 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(771851..772441) Isosphaera pallida ATCC 43644 10154651 YP_004177687.1 CDS Isop_0545 NC_014962.1 772559 773728 R KEGG: mxa:MXAN_2900 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(772559..773728) Isosphaera pallida ATCC 43644 10154652 YP_004177688.1 CDS Isop_0546 NC_014962.1 773842 774444 R COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005269; KEGG: mca:MCA2182 decarboxylase family protein; PFAM: Conserved hypothetical protein CHP00730; SPTR: Decarboxylase family protein; PFAM: Possible lysine decarboxylase; TIGRFAM: conserved hypothetical protein, DprA/Smf-related, family 1; conserved hypothetical protein, DprA/Smf-related, family 2; hypothetical protein complement(773842..774444) Isosphaera pallida ATCC 43644 10154653 YP_004177689.1 CDS Isop_0547 NC_014962.1 774441 775949 R COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR002078: IPR002197: IPR020441; KEGG: psa:PST_3225 transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SPTR: Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; TIGRFAM: PAS domain S-box; Fis family sigma-54 specific transcriptional regulator complement(774441..775949) Isosphaera pallida ATCC 43644 10154654 YP_004177690.1 CDS Isop_0548 NC_014962.1 776032 777669 R KEGG: plm:Plim_2336 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(776032..777669) Isosphaera pallida ATCC 43644 10154655 YP_004177691.1 CDS Isop_0549 NC_014962.1 777711 779360 R KEGG: rba:RB10354 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(777711..779360) Isosphaera pallida ATCC 43644 10154656 YP_004177692.1 CDS Isop_0550 NC_014962.1 779587 780039 R COGs: COG0355 F0F1-type ATP synthase epsilon subunit (mitochondrial delta subunit); InterPro IPR020546: IPR001469; KEGG: psl:Psta_4414 ATP synthase F1, epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit-like; SPTR: ATP synthase epsilon chain; TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria); ATP synthase F1 subunit epsilon complement(779587..780039) Isosphaera pallida ATCC 43644 10154657 YP_004177693.1 CDS Isop_0551 NC_014962.1 780249 781688 R COGs: COG0055 F0F1-type ATP synthase beta subunit; InterProIPR004100: IPR000194: IPR000793: IPR003593: IPR 020003: IPR005722; KEGG: rba:RB10217 F0F1 ATP synthase subunit beta; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; PRIAM: H(+)-transporting two-sector ATPase; SMART: AAA ATPase; SPTR: F0F1 ATP synthase subunit beta; TIGRFAM: ATP synthase F1, beta subunit; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta chain, C terminal domain; TIGRFAM: ATP synthase, F1 beta subunit; ATP synthase F1 subcomplex subunit beta complement(780249..781688) Isosphaera pallida ATCC 43644 10154658 YP_004177694.1 CDS Isop_0552 NC_014962.1 781875 782795 R COGs: COG0224 F0F1-type ATP synthase gamma subunit; InterPro IPR000131; KEGG: psl:Psta_4412 ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit; SPTR: ATP synthase gamma chain; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit; ATP synthase F1 subcomplex subunit gamma complement(781875..782795) Isosphaera pallida ATCC 43644 10154659 YP_004177695.1 CDS Isop_0553 NC_014962.1 782955 784625 R COGs: COG0056 F0F1-type ATP synthase alpha subunit; InterProIPR004100: IPR000194: IPR000793: IPR020003: IPR 005294; KEGG: psl:Psta_4410 ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SPTR: ATP synthase subunit alpha; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta chain, C terminal domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit; ATP synthase F1 subcomplex subunit alpha complement(782955..784625) Isosphaera pallida ATCC 43644 10154660 YP_004177696.1 CDS Isop_0554 NC_014962.1 784582 785229 R COGs: COG0712 F0F1-type ATP synthase delta subunit (mitochondrial oligomycin sensitivity protein); InterPro IPR000711; KEGG: plm:Plim_0173 ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; SPTR: Probable ATP synthase delta chain; TIGRFAM: ATP synthase F1, delta subunit; PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit; ATP synthase F1 subunit delta complement(784582..785229) Isosphaera pallida ATCC 43644 10154661 YP_004177697.1 CDS Isop_0555 NC_014962.1 785226 785852 R COGs: COG0711 F0F1-type ATP synthase subunit b; InterPro IPR002146: IPR005864; KEGG: plm:Plim_0172 ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit; SPTR: ATP synthase subunit b; TIGRFAM: ATP synthase F0, B subunit; PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b; ATP synthase F0 subunit B complement(785226..785852) Isosphaera pallida ATCC 43644 10154662 YP_004177698.1 CDS Isop_0556 NC_014962.1 786158 786529 R InterPro IPR002379: IPR020537: IPR000454; KEGG: rbi:RB2501_06560 hypothetical protein; PFAM: H+transporting two-sector ATPase C subunit; SPTR: Putative uncharacterized protein; PFAM: ATP synthase subunit C; H+transporting two-sector ATPase subunit C complement(786158..786529) Isosphaera pallida ATCC 43644 10154663 YP_004177699.1 CDS Isop_0557 NC_014962.1 786854 787663 R COGs: COG0356 F0F1-type ATP synthase subunit a; InterPro IPR000568; KEGG: plm:Plim_0170 ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit; SPTR: ATP synthase subunit a; TIGRFAM: ATP synthase F0, A subunit; PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); ATP synthase F0 subunit A complement(786854..787663) Isosphaera pallida ATCC 43644 10154664 YP_004177700.1 CDS Isop_0558 NC_014962.1 787693 787989 R KEGG: bts:Btus_3241 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(787693..787989) Isosphaera pallida ATCC 43644 10154665 YP_004177701.1 CDS Isop_0559 NC_014962.1 788640 789800 D InterPro IPR003088: IPR009056; KEGG: psl:Psta_3515 hypothetical protein; PFAM: cytochrome c class I; SPTR: Putative uncharacterized protein; PFAM: Cytochrome c; class I cytochrome c 788640..789800 Isosphaera pallida ATCC 43644 10154666 YP_004177702.1 CDS Isop_0560 NC_014962.1 789949 790692 D KEGG: psl:Psta_3514 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 789949..790692 Isosphaera pallida ATCC 43644 10154667 YP_004177703.1 CDS Isop_0561 NC_014962.1 791025 792443 D COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR000883; KEGG: psl:Psta_3513 cytochrome-c oxidase; PFAM: cytochrome c oxidase subunit I; PRIAM: Cytochrome-c oxidase; SPTR: Cytochrome-c oxidase; PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; cytochrome-c oxidase 791025..792443 Isosphaera pallida ATCC 43644 10154668 YP_004177704.1 CDS Isop_0562 NC_014962.1 792637 793476 D COGs: COG2993 Cbb3-type cytochrome oxidase cytochrome c subunit; InterPro IPR003468; KEGG: psl:Psta_3512 cytochrome c oxidase mono-heme subunit/FixO; PFAM: cytochrome C oxidase mono-heme subunit/FixO; SPTR: Cytochrome C oxidase mono-heme subunit/FixO; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; cytochrome C oxidase mono-heme subunit/FixO 792637..793476 Isosphaera pallida ATCC 43644 10154669 YP_004177705.1 CDS Isop_0563 NC_014962.1 793480 793956 D KEGG: psl:Psta_3511 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 793480..793956 Isosphaera pallida ATCC 43644 10154670 YP_004177706.1 CDS Isop_0564 NC_014962.1 793953 794162 D KEGG: psl:Psta_3510 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 793953..794162 Isosphaera pallida ATCC 43644 10154671 YP_004177707.1 CDS Isop_0565 NC_014962.1 794159 796669 D COGs: COG2217 Cation transport ATPase; InterProIPR008250: IPR005834: IPR018303: IPR006416: IPR 001757; KEGG: ank:AnaeK_1237 heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; SPTR: Heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal translocating P-type ATPase 794159..796669 Isosphaera pallida ATCC 43644 10154672 YP_004177708.1 CDS Isop_0566 NC_014962.1 796761 797504 D COGs: COG2836 conserved hypothetical protein; KEGG: psl:Psta_3508 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 796761..797504 Isosphaera pallida ATCC 43644 10154673 YP_004177709.1 CDS Isop_0567 NC_014962.1 797686 800259 D COGs: COG1033 exporter of the RND superfamily protein; InterPro IPR000731; KEGG: psl:Psta_0163 exporter of the RND superfamily protein-like protein; SPTR: Exporter of the RND superfamily protein-like protein; PFAM: MMPL family; hypothetical protein 797686..800259 Isosphaera pallida ATCC 43644 10154674 YP_004177710.1 CDS Isop_0568 NC_014962.1 800944 801786 R COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: plm:Plim_0391 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: Xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase-like TIM barrel; xylose isomerase domain-containing protein complement(800944..801786) Isosphaera pallida ATCC 43644 10154675 YP_004177711.1 CDS Isop_0569 NC_014962.1 802042 803202 R COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: plm:Plim_2489 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain; oxidoreductase domain-containing protein complement(802042..803202) Isosphaera pallida ATCC 43644 10154676 YP_004177712.1 CDS Isop_0570 NC_014962.1 803382 804458 R InterPro IPR012307: IPR017441; KEGG: rba:RB12035 hypothetical protein; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: Putative uncharacterized protein; PFAM: Xylose isomerase-like TIM barrel; xylose isomerase domain-containing protein complement(803382..804458) Isosphaera pallida ATCC 43644 10154677 YP_004177713.1 CDS Isop_0571 NC_014962.1 804621 805871 R KEGG: plm:Plim_1608 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(804621..805871) Isosphaera pallida ATCC 43644 10154678 YP_004177714.1 CDS Isop_0572 NC_014962.1 806759 807646 D COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: aca:ACP_1745 hydrolase, carbon-nitrogen family; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Hydrolase, carbon-nitrogen family; PFAM: Carbon-nitrogen hydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 806759..807646 Isosphaera pallida ATCC 43644 10154679 YP_004177715.1 CDS Isop_0573 NC_014962.1 807643 808851 D COGs: COG2957 Peptidylarginine deiminase; InterPro IPR007466; KEGG: aca:ACP_1746 peptidyl-arginine deiminase family protein; PFAM: Porphyromonas-type peptidyl-arginine deiminase; PRIAM: Agmatine deiminase; SPTR: Agmatine deiminase; PFAM: Porphyromonas-type peptidyl-arginine deiminase; agmatine deiminase 807643..808851 Isosphaera pallida ATCC 43644 10154680 YP_004177716.1 CDS Isop_0574 NC_014962.1 808848 809006 R hypothetical protein complement(808848..809006) Isosphaera pallida ATCC 43644 10154681 YP_004177717.1 CDS Isop_0575 NC_014962.1 809104 809730 D InterPro IPR000866: IPR017936; KEGG: psl:Psta_1644 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: AhpC/TSA family; alkyl hydroperoxide reductase 809104..809730 Isosphaera pallida ATCC 43644 10154682 YP_004177718.1 CDS Isop_0576 NC_014962.1 810042 810749 D InterPro IPR000866: IPR017936; KEGG: plm:Plim_0203 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: AhpC/TSA family; alkyl hydroperoxide reductase 810042..810749 Isosphaera pallida ATCC 43644 10154683 YP_004177719.1 CDS Isop_0577 NC_014962.1 810771 811622 D InterPro IPR013740: IPR017936; KEGG: shn:Shewana3_1881 redoxin domain-containing protein; PFAM: Redoxin domain protein; SPTR: Thioredoxin-like protein; PFAM: AhpC/TSA family; redoxin domain-containing protein 810771..811622 Isosphaera pallida ATCC 43644 10154684 YP_004177720.1 CDS Isop_0578 NC_014962.1 811838 812932 D COGs: COG0216 Protein chain release factor A; InterPro IPR005139: IPR000352: IPR004373; KEGG: plm:Plim_0922 peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein; SPTR: Peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1; peptide chain release factor 1 (bRF-1) 811838..812932 Isosphaera pallida ATCC 43644 10154685 YP_004177721.1 CDS Isop_0579 NC_014962.1 813036 813995 D COGs: COG2890 Methylase of polypeptide chain release factors; InterPro IPR007848: IPR002052: IPR004556: IPR019874; KEGG: plm:Plim_3974 modification methylase, HemK family; PFAM: methyltransferase small; SPTR: HemK protein; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases; protein-(glutamine-N5) methyltransferase, release factor-specific; protein-(glutamine-N5) methyltransferase 813036..813995 Isosphaera pallida ATCC 43644 10154686 YP_004177722.1 CDS Isop_0580 NC_014962.1 814488 815924 D COGs: COG1219 ATP-dependent protease Clp ATPase subunit; InterProIPR010603: IPR013093: IPR019489: IPR003593: IPR 004487; KEGG: psl:Psta_4171 ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; SMART: AAA ATPase; SPTR: ATP-dependent Clp protease ATP-binding subunit clpX; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX); ATP-dependent Clp protease ATP-binding subunit ClpX 814488..815924 Isosphaera pallida ATCC 43644 10154687 YP_004177723.1 CDS Isop_0581 NC_014962.1 816182 817396 D COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: rsh:Rsph17029_1561 cystathionine gamma-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; SPTR: Cystathionine gamma-synthase; PFAM: Cys/Met metabolism PLP-dependent enzyme; Cys/Met metabolism pyridoxal-phosphate-dependent protein 816182..817396 Isosphaera pallida ATCC 43644 10154688 YP_004177724.1 CDS Isop_0582 NC_014962.1 817398 818642 D COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mxa:MXAN_1032 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1; manually curated; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase 817398..818642 Isosphaera pallida ATCC 43644 10154689 YP_004177725.1 CDS Isop_0583 NC_014962.1 818711 819829 R KEGG: sti:Sthe_3495 ABC-type sugar transport system periplasmic component-like protein; SPTR: ABC-type sugar transport system periplasmic component-like protein; hypothetical protein complement(818711..819829) Isosphaera pallida ATCC 43644 10154690 YP_004177726.1 CDS Isop_0584 NC_014962.1 819966 821801 R COGs: COG0527 Aspartokinase; InterProIPR001048: IPR002912: IPR018042: IPR005260: IPR 001341; KEGG: psl:Psta_4303 aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; SPTR: Aspartokinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: Amino acid kinase family; ACT domain; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase; aspartate kinase complement(819966..821801) Isosphaera pallida ATCC 43644 10154691 YP_004177727.1 CDS Isop_0585 NC_014962.1 822017 823237 R COGs: COG3635 phosphoglycerate mutase AP superfamily; InterPro IPR019304: IPR006124: IPR004456: IPR013371; KEGG: psl:Psta_4304 proposed homoserine kinase; PFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; metalloenzyme domain protein; PRIAM: Phosphoglycerate mutase; SPTR: Cofactor-independent phosphoglycerate mutase; TIGRFAM: proposed homoserine kinase; phosphonopyruvate decarboxylase-related protein; PFAM: Metalloenzyme superfamily; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form; proposed homoserine kinase; phosphoglycerate mutase complement(822017..823237) Isosphaera pallida ATCC 43644 10154692 YP_004177728.1 CDS Isop_0586 NC_014962.1 823750 824688 D InterPro IPR004564; KEGG: plm:Plim_3543 hypothetical protein; PFAM: outer membrane lipoprotein carrier protein LolA; SPTR: Putative uncharacterized protein; PFAM: Outer membrane lipoprotein carrier protein LolA; TIGRFAM: Planctomycetes uncharacterized domain TIGR03009; outer membrane lipoprotein carrier protein LolA 823750..824688 Isosphaera pallida ATCC 43644 10154693 YP_004177729.1 CDS Isop_0587 NC_014962.1 825155 826345 D COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839: IPR004838: IPR001176; KEGG: plm:Plim_0135 aminotransferase class I and II; PFAM: aminotransferase class I and II; SPTR: Aspartate aminotransferase; PFAM: Aminotransferase class I and II; L-aspartate aminotransferase apoenzyme 825155..826345 Isosphaera pallida ATCC 43644 10154694 YP_004177730.1 CDS Isop_0588 NC_014962.1 826563 827957 D KEGG: plm:Plim_4199 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 826563..827957 Isosphaera pallida ATCC 43644 10154695 YP_004177731.1 CDS Isop_0589 NC_014962.1 828315 829223 D KEGG: bfu:BC1G_14869 hypothetical protein; SPTR: NADH dehydrogenase subunit J; hypothetical protein 828315..829223 Isosphaera pallida ATCC 43644 10154696 YP_004177732.1 CDS Isop_0590 NC_014962.1 829442 829534 D hypothetical protein 829442..829534 Isosphaera pallida ATCC 43644 10154697 YP_004177733.1 CDS Isop_0591 NC_014962.1 829747 830577 D KEGG: zro:ZYRO0A11154g hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 829747..830577 Isosphaera pallida ATCC 43644 10154698 YP_004177734.1 CDS Isop_0592 NC_014962.1 830673 831515 R COGs: COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase; InterPro IPR013216; KEGG: sus:Acid_1803 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: Methyltransferase domain; type 11 methyltransferase complement(830673..831515) Isosphaera pallida ATCC 43644 10154699 YP_004177735.1 CDS Isop_0593 NC_014962.1 831506 832612 R COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: tro:trd_1295 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: Putative uncharacterized protein; PFAM: Methyltransferase domain; type 11 methyltransferase complement(831506..832612) Isosphaera pallida ATCC 43644 10154700 YP_004177736.1 CDS Isop_0594 NC_014962.1 832588 833376 R COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: adg:Adeg_1620 polysaccharide deacetylase; PFAM: polysaccharide deacetylase; SPTR: Polysaccharide deacetylase; PFAM: Polysaccharide deacetylase; polysaccharide deacetylase complement(832588..833376) Isosphaera pallida ATCC 43644 10154701 YP_004177737.1 CDS Isop_0595 NC_014962.1 833373 834506 R COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: rca:Rcas_2202 oxidoreductase domain-containing protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase domain-containing protein complement(833373..834506) Isosphaera pallida ATCC 43644 10154702 YP_004177738.1 CDS Isop_0596 NC_014962.1 834560 835855 R KEGG: rpt:Rpal_2847 alginate O-acetyltransferase AlgJ; SPTR: Alginate O-acetyltransferase AlgJ; hypothetical protein complement(834560..835855) Isosphaera pallida ATCC 43644 10154703 YP_004177739.1 CDS Isop_0597 NC_014962.1 835874 837325 R COGs: COG1696 membrane protein involved in D-alanine export; InterPro IPR004299; KEGG: azl:AZL_019970 membrane bound O-acyl transferase; PFAM: membrane bound O-acyl transferase MBOAT family protein; SPTR: Membrane bound O-acyl transferase MBOAT family protein; PFAM: MBOAT family; membrane bound O-acyl transferase MBOAT family protein complement(835874..837325) Isosphaera pallida ATCC 43644 10154704 YP_004177740.1 CDS Isop_0598 NC_014962.1 837322 838218 R KEGG: rrs:RoseRS_1291 glycosyl transferase family protein; SPTR: Glycosyl transferase, family 2; hypothetical protein complement(837322..838218) Isosphaera pallida ATCC 43644 10154705 YP_004177741.1 CDS Isop_0599 NC_014962.1 838215 839480 R COGs: COG2006 conserved hypothetical protein; KEGG: sus:Acid_1417 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF362); hypothetical protein complement(838215..839480) Isosphaera pallida ATCC 43644 10154706 YP_004177742.1 CDS Isop_0600 NC_014962.1 839467 840591 R COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: cyc:PCC7424_4195 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase complement(839467..840591) Isosphaera pallida ATCC 43644 10154707 YP_004177743.1 CDS Isop_0601 NC_014962.1 840895 842928 D KEGG: sus:Acid_4318 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 840895..842928 Isosphaera pallida ATCC 43644 10154708 YP_004177744.1 CDS Isop_0602 NC_014962.1 843064 843666 D KEGG: cre:CHLREDRAFT_141529 hypothetical protein; SPTR: Predicted protein; hypothetical protein 843064..843666 Isosphaera pallida ATCC 43644 10154709 YP_004177745.1 CDS Isop_0603 NC_014962.1 843778 844206 D COGs: COG1186 Protein chain release factor B; InterPro IPR000352; KEGG: dal:Dalk_4700 class I peptide chain release factor; PFAM: Class I peptide chain release factor; SPTR: Class I peptide chain release factor; PFAM: RF-1 domain; class I peptide chain release factor 843778..844206 Isosphaera pallida ATCC 43644 10154710 YP_004177746.1 CDS Isop_0604 NC_014962.1 844267 845817 R InterPro IPR003140; KEGG: sus:Acid_1148 putative esterase; PFAM: phospholipase/Carboxylesterase; SPTR: Putative esterase; PFAM: Phospholipase/Carboxylesterase; phospholipase/carboxylesterase complement(844267..845817) Isosphaera pallida ATCC 43644 10154711 YP_004177747.1 CDS Isop_0605 NC_014962.1 845893 847005 R COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: psl:Psta_0651 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: Xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase-like TIM barrel; xylose isomerase domain-containing protein complement(845893..847005) Isosphaera pallida ATCC 43644 10154712 YP_004177748.1 CDS Isop_0606 NC_014962.1 847169 847837 R InterPro IPR010496; KEGG: tra:Trad_1254 protein of unknown function DUF1080; PFAM: protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF1080); hypothetical protein complement(847169..847837) Isosphaera pallida ATCC 43644 10154713 YP_004177749.1 CDS Isop_0607 NC_014962.1 847851 848723 D KEGG: cfa:609955 hypothetical protein LOC609955; SPTR: Putative uncharacterized protein; hypothetical protein 847851..848723 Isosphaera pallida ATCC 43644 10154714 YP_004177750.1 CDS Isop_0608 NC_014962.1 848723 851446 D InterPro IPR000834; KEGG: sti:Sthe_2480 hypothetical protein; PFAM: peptidase M14 carboxypeptidase A; SPTR: Putative uncharacterized protein; PFAM: Zinc carboxypeptidase; peptidase M14 carboxypeptidase A 848723..851446 Isosphaera pallida ATCC 43644 10154715 YP_004177751.1 CDS Isop_0609 NC_014962.1 851443 854442 R COGs: COG0308 Aminopeptidase N; InterPro IPR014782; KEGG: tte:TTE2694 aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; SPTR: Peptidase family M1, putative; PFAM: Peptidase family M1; peptidase M1 membrane alanine aminopeptidase complement(851443..854442) Isosphaera pallida ATCC 43644 10154716 YP_004177752.1 CDS Isop_0610 NC_014962.1 854858 858331 D COGs: COG1038 Pyruvate carboxylase; InterProIPR005481: IPR005479: IPR005482: IPR000891: IPR 003379: IPR000089: IPR005930: IPR011761: IPR011764: IPR001882; KEGG: psl:Psta_2726 pyruvate carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; pyruvate carboxyltransferase; Conserved carboxylase region; biotin/lipoyl attachment domain-containing protein; SPTR: Pyruvate carboxylase; TIGRFAM: pyruvate carboxylase; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; HMGL-like; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; Conserved carboxylase domain; Biotin-requiring enzyme; TIGRFAM: pyruvate carboxylase; pyruvate carboxylase 854858..858331 Isosphaera pallida ATCC 43644 10154717 YP_004177753.1 CDS Isop_0611 NC_014962.1 858425 859054 R COGs: COG0526 Thiol-disulfide isomerase and thioredoxins; InterPro IPR013740: IPR017936: IPR017937: IPR006650; KEGG: son:SO_0269 thioredoxin, putative; PFAM: Redoxin domain protein; SPTR: Thioredoxin, putative; PFAM: Redoxin; redoxin domain-containing protein complement(858425..859054) Isosphaera pallida ATCC 43644 10154718 YP_004177754.1 CDS Isop_0612 NC_014962.1 859104 860435 R KEGG: dal:Dalk_3286 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(859104..860435) Isosphaera pallida ATCC 43644 10154719 YP_004177755.1 CDS Isop_0613 NC_014962.1 860551 861729 R COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: hau:Haur_2689 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase complement(860551..861729) Isosphaera pallida ATCC 43644 10154720 YP_004177756.1 CDS Isop_0614 NC_014962.1 861888 862463 R COGs: COG0526 Thiol-disulfide isomerase and thioredoxins; InterPro IPR013740: IPR017936; KEGG: mch:Mchl_0201 redoxin domain protein; PFAM: Redoxin domain protein; SPTR: Redoxin domain protein; PFAM: Redoxin; redoxin domain-containing protein complement(861888..862463) Isosphaera pallida ATCC 43644 10154721 YP_004177757.1 CDS Isop_0615 NC_014962.1 862528 862788 D KEGG: bcl:ABC2207 Zn-dependent protease; SPTR: Zn-dependent protease; hypothetical protein 862528..862788 Isosphaera pallida ATCC 43644 10154722 YP_004177758.1 CDS Isop_0616 NC_014962.1 862832 863926 R InterPro IPR013740: IPR017936: IPR017937; KEGG: mch:Mchl_0201 redoxin domain protein; PFAM: Redoxin domain protein; SPTR: Redoxin domain protein; PFAM: Redoxin; redoxin domain-containing protein complement(862832..863926) Isosphaera pallida ATCC 43644 10154723 YP_004177759.1 CDS Isop_0618 NC_014962.1 864583 865296 R InterPro IPR011449; KEGG: npu:Npun_F2645 hypothetical protein; PFAM: protein of unknown function DUF1555; SPTR: Putative uncharacterized protein; hypothetical protein complement(864583..865296) Isosphaera pallida ATCC 43644 10154725 YP_004177760.1 CDS Isop_0619 NC_014962.1 865652 865768 R hypothetical protein complement(865652..865768) Isosphaera pallida ATCC 43644 10154726 YP_004177761.1 CDS Isop_0620 NC_014962.1 865765 867453 R COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001940: IPR001254: IPR001478; KEGG: azl:AZL_e02840 trypsin-like serine protease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: Peptidase S1 and S6 chymotrypsin/Hap; PFAM: Trypsin; peptidase S1 and S6 chymotrypsin/Hap complement(865765..867453) Isosphaera pallida ATCC 43644 10154727 YP_004177762.1 CDS Isop_0621 NC_014962.1 867573 869537 R InterPro IPR000866: IPR017936; KEGG: tgr:Tgr7_0547 peroxiredoxin-like protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Peroxiredoxin-like protein; PFAM: AhpC/TSA family; alkyl hydroperoxide reductase complement(867573..869537) Isosphaera pallida ATCC 43644 10154728 YP_004177763.1 CDS Isop_0622 NC_014962.1 869709 871469 R InterPro IPR011031; KEGG: sus:Acid_4315 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(869709..871469) Isosphaera pallida ATCC 43644 10154729 YP_004177764.1 CDS Isop_0623 NC_014962.1 871567 873186 R InterPro IPR011031; KEGG: sus:Acid_4315 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(871567..873186) Isosphaera pallida ATCC 43644 10154730 YP_004177765.1 CDS Isop_0624 NC_014962.1 874022 875557 R COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: plm:Plim_3483 efflux transporter, RND family, MFP subunit; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter MFP subunit complement(874022..875557) Isosphaera pallida ATCC 43644 10154731 YP_004177766.1 CDS Isop_0625 NC_014962.1 875885 876190 D KEGG: drt:Dret_1844 methyltransferase type 11; SPTR: Methyltransferase type 11; hypothetical protein 875885..876190 Isosphaera pallida ATCC 43644 10154732 YP_004177767.1 CDS Isop_0626 NC_014962.1 876198 877571 D COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: scl:sce2804 RND family efflux transporter MFP subunit; PFAM: secretion protein HlyD family protein; SPTR: Putative HlyD-like secretion protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter MFP subunit 876198..877571 Isosphaera pallida ATCC 43644 10154733 YP_004177768.1 CDS Isop_0627 NC_014962.1 877850 881230 D COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: scl:sce2805 hypothetical protein; PFAM: acriflavin resistance protein; SPTR: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family protein; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; acriflavin resistance protein 877850..881230 Isosphaera pallida ATCC 43644 10154734 YP_004177769.1 CDS Isop_0628 NC_014962.1 881250 884021 R COGs: COG0178 Excinuclease ATPase subunit; InterPro IPR003439; KEGG: sfu:Sfum_1602 excinuclease ABC, A subunit; PFAM: ABC transporter related; SPTR: Excinuclease ABC subunit A; TIGRFAM: excinuclease ABC, A subunit; ABC transporter-like protein complement(881250..884021) Isosphaera pallida ATCC 43644 10154735 YP_004177770.1 CDS Isop_0629 NC_014962.1 884093 884794 R COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: psl:Psta_3605 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; phospholipid/glycerol acyltransferase complement(884093..884794) Isosphaera pallida ATCC 43644 10154736 YP_004177771.1 CDS Isop_0630 NC_014962.1 884912 885649 R COGs: COG0283 Cytidylate kinase; InterPro IPR003136: IPR011994; KEGG: alv:Alvin_1646 cytidylate kinase; PFAM: cytidylate kinase region; SPTR: Cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase; cytidylate kinase complement(884912..885649) Isosphaera pallida ATCC 43644 10154737 YP_004177772.1 CDS Isop_0631 NC_014962.1 886073 886669 D COGs: COG4911 conserved hypothetical protein; InterPro IPR018699; KEGG: tro:trd_A0913 hypothetical protein; PFAM: Protein of unknown function DUF2203; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2203); hypothetical protein 886073..886669 Isosphaera pallida ATCC 43644 10154738 YP_004177773.1 CDS Isop_0632 NC_014962.1 886666 886815 D KEGG: vsp:VS_II1081 transcriptional regulators, LysR family; SPTR: Transcriptional regulators, LysR family; hypothetical protein 886666..886815 Isosphaera pallida ATCC 43644 10154739 YP_004177774.1 CDS Isop_0633 NC_014962.1 887028 888989 D KEGG: sfu:Sfum_1331 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 887028..888989 Isosphaera pallida ATCC 43644 10154740 YP_004177775.1 CDS Isop_0634 NC_014962.1 889146 890273 D COGs: COG2006 conserved hypothetical protein; InterPro IPR006311; KEGG: hoh:Hoch_0562 protein of unknown function DUF362; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF362); hypothetical protein 889146..890273 Isosphaera pallida ATCC 43644 10154741 YP_004177776.1 CDS Isop_0635 NC_014962.1 890381 892144 D COGs: COG0348 Polyferredoxin; InterPro IPR017896: IPR017900; KEGG: hoh:Hoch_0561 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S binding domain; 4Fe-4S ferredoxin 890381..892144 Isosphaera pallida ATCC 43644 10154742 YP_004177777.1 CDS Isop_0636 NC_014962.1 892163 893296 R COGs: COG2255 Holliday junction resolvasome helicase subunit; InterProIPR004605: IPR008824: IPR003959: IPR008823: IPR 003593: IPR002464; KEGG: plm:Plim_2430 Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; SMART: AAA ATPase; SPTR: Holliday junction DNA helicase RuvB; TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit; Holliday junction DNA helicase subunit RuvB complement(892163..893296) Isosphaera pallida ATCC 43644 10154743 YP_004177778.1 CDS Isop_0637 NC_014962.1 893354 894052 R COGs: COG0632 Holliday junction resolvasome DNA-binding subunit; InterPro IPR000085; KEGG: rba:RB4610 holliday junction DNA helicase RuvA; SPTR: Holliday junction ATP-dependent DNA helicase ruvA; Holliday junction ATP-dependent DNA helicase RuvA complement(893354..894052) Isosphaera pallida ATCC 43644 10154744 YP_004177779.1 CDS Isop_0638 NC_014962.1 894310 895089 D COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: plm:Plim_2866 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter; ABC transporter-like protein 894310..895089 Isosphaera pallida ATCC 43644 10154745 YP_004177780.1 CDS Isop_0639 NC_014962.1 895126 896052 D COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: plm:Plim_2867 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 895126..896052 Isosphaera pallida ATCC 43644 10154746 YP_004177781.1 CDS Isop_0640 NC_014962.1 896155 897315 D COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; KEGG: plm:Plim_2868 NMT1/THI5 like domain protein; SPTR: NMT1/THI5 like domain protein; PFAM: NMT1/THI5 like; NMT1/THI5 like domain-containing protein 896155..897315 Isosphaera pallida ATCC 43644 10154747 YP_004177782.1 CDS Isop_0641 NC_014962.1 897491 899074 D COGs: COG0169 Shikimate 5-dehydrogenase; InterPro IPR001381: IPR013708: IPR006151: IPR011342; KEGG: psl:Psta_4018 shikimate 5-dehydrogenase; PFAM: dehydroquinase class I; Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; SPTR: Shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain; Type I 3-dehydroquinase; Shikimate / quinate 5-dehydrogenase; TIGRFAM: 3-dehydroquinate dehydratase, type I; shikimate 5-dehydrogenase; shikimate 5-dehydrogenase 897491..899074 Isosphaera pallida ATCC 43644 10154748 YP_004177783.1 CDS Isop_0642 NC_014962.1 899080 899790 D COGs: COG0703 Shikimate kinase; InterPro IPR000623; KEGG: nha:Nham_0490 shikimate kinase; PFAM: shikimate kinase; PRIAM: Shikimate kinase; SPTR: Shikimate kinase; PFAM: Shikimate kinase; shikimate kinase 899080..899790 Isosphaera pallida ATCC 43644 10154749 YP_004177784.1 CDS Isop_0643 NC_014962.1 899787 900758 D InterPro IPR000045; KEGG: plm:Plim_1841 peptidase A24A domain protein; PFAM: peptidase A24A prepilin type IV; SPTR: Probable type 4 prepilin-like proteins leader peptide processing enzyme; PFAM: Type IV leader peptidase family; peptidase A24A prepilin type IV 899787..900758 Isosphaera pallida ATCC 43644 10154750 YP_004177785.1 CDS Isop_0644 NC_014962.1 900950 901312 D KEGG: blo:BL0962 membrane protein with acetylase function; SPTR: Hypothetical membrane protein with possible acetylase function; hypothetical protein 900950..901312 Isosphaera pallida ATCC 43644 10154751 YP_004177786.1 CDS Isop_0645 NC_014962.1 901374 902441 D KEGG: lma:LmjF35.0520 proteophosphoglycan ppg4; SPTR: Proteophosphoglycan ppg4; hypothetical protein 901374..902441 Isosphaera pallida ATCC 43644 10154752 YP_004177787.1 CDS Isop_0646 NC_014962.1 902731 903147 D KEGG: bfo:BRAFLDRAFT_86726 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 902731..903147 Isosphaera pallida ATCC 43644 10154753 YP_004177788.1 CDS Isop_0647 NC_014962.1 903366 904079 D COGs: COG0637 phosphatase/phosphohexomutase; InterPro IPR005834: IPR006402; KEGG: nde:NIDE1522 putative beta-phosphoglucomutase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; HAD-superfamily hydrolase 903366..904079 Isosphaera pallida ATCC 43644 10154754 YP_004177789.1 CDS Isop_0648 NC_014962.1 904170 904616 D InterPro IPR001789; KEGG: rxy:Rxyl_2770 response regulator receiver protein; SPTR: Response regulator receiver protein; PFAM: Response regulator receiver domain; hypothetical protein 904170..904616 Isosphaera pallida ATCC 43644 10154755 YP_004177790.1 CDS Isop_0649 NC_014962.1 904777 905220 D COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: plm:Plim_1175 heat shock protein HSP20; PFAM: heat shock protein Hsp20; SPTR: Heat shock protein, HSP20 family; PFAM: Hsp20/alpha crystallin family; heat shock protein Hsp20 904777..905220 Isosphaera pallida ATCC 43644 10154756 YP_004177791.1 CDS Isop_0650 NC_014962.1 905333 906001 D COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: csa:Csal_3255 heat shock protein HSP20; PFAM: heat shock protein Hsp20; SPTR: Small heat shock protein (Class I); PFAM: Hsp20/alpha crystallin family; heat shock protein Hsp20 905333..906001 Isosphaera pallida ATCC 43644 10154757 YP_004177792.1 CDS Isop_0651 NC_014962.1 906045 906257 D KEGG: plm:Plim_3756 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 906045..906257 Isosphaera pallida ATCC 43644 10154758 YP_004177793.1 CDS Isop_0652 NC_014962.1 906653 907567 R COGs: COG0078 Ornithine carbamoyltransferase; InterPro IPR002292: IPR006130: IPR006132: IPR006131; KEGG: rba:RB5986 ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; PRIAM: Ornithine carbamoyltransferase; SPTR: Ornithine carbamoyltransferase; TIGRFAM: ornithine carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase; ornithine carbamoyltransferase complement(906653..907567) Isosphaera pallida ATCC 43644 10154759 YP_004177794.1 CDS Isop_0653 NC_014962.1 908012 909220 R COGs: COG4992 Ornithine/acetylornithine aminotransferase; InterPro IPR005814: IPR004636; KEGG: psl:Psta_2678 acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; SPTR: Acetylornithine and succinylornithine aminotransferase; TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine aminotransferases; acetylornithine aminotransferase complement(908012..909220) Isosphaera pallida ATCC 43644 10154760 YP_004177795.1 CDS Isop_0654 NC_014962.1 909525 910472 R COGs: COG0548 Acetylglutamate kinase; InterPro IPR001048: IPR004662: IPR011148; KEGG: psl:Psta_2677 acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; SPTR: Acetylglutamate kinase; TIGRFAM: acetylglutamate kinase; PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase; N-acetylglutamate kinase complement(909525..910472) Isosphaera pallida ATCC 43644 10154761 YP_004177796.1 CDS Isop_0655 NC_014962.1 911031 911525 D COGs: COG4747 ACT domain-containing protein; KEGG: psl:Psta_2888 amino acid-binding ACT domain protein; SPTR: Amino acid-binding ACT domain protein; amino acid-binding ACT domain-containing protein 911031..911525 Isosphaera pallida ATCC 43644 10154762 YP_004177797.1 CDS Isop_0656 NC_014962.1 911519 912247 R COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR020476: IPR000086: IPR020084; KEGG: pru:PRU_0340 ADP-ribose pyrophosphatase; PFAM: NUDIX hydrolase; SPTR: ADP-ribose pyrophosphatase; PFAM: NUDIX domain; NUDIX hydrolase complement(911519..912247) Isosphaera pallida ATCC 43644 10154763 YP_004177798.1 CDS Isop_0657 NC_014962.1 912367 913548 D COGs: COG1960 Acyl-CoA dehydrogenase; KEGG: psl:Psta_0990 putative isovaleryl-CoA dehydrogenase protein; SPTR: Putative isovaleryl-CoA dehydrogenase protein; putative isovaleryl-CoA dehydrogenase protein 912367..913548 Isosphaera pallida ATCC 43644 10154764 YP_004177799.1 CDS Isop_0658 NC_014962.1 913695 914579 D COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway); InterPro IPR002529; KEGG: plm:Plim_1770 5-carboxymethyl-2-hydroxymuconate delta-isomerase; PFAM: fumarylacetoacetate (FAA) hydrolase; PRIAM: Ureidoglycolate lyase; SPTR: 5-carboxymethyl-2-hydroxymuconate Delta-isomerase; PFAM: Fumarylacetoacetate (FAA) hydrolase family; ureidoglycolate lyase 913695..914579 Isosphaera pallida ATCC 43644 10154765 YP_004177800.1 CDS Isop_0659 NC_014962.1 914609 916135 R KEGG: dal:Dalk_0843 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(914609..916135) Isosphaera pallida ATCC 43644 10154766 YP_004177801.1 CDS Isop_0660 NC_014962.1 916675 918126 R COGs: COG0015 Adenylosuccinate lyase; InterPro IPR000362: IPR019468: IPR004769: IPR020557; KEGG: plm:Plim_3831 adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase-like; SPTR: Adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase; adenylosuccinate lyase complement(916675..918126) Isosphaera pallida ATCC 43644 10154767 YP_004177802.1 CDS Isop_0661 NC_014962.1 918355 919122 D COGs: COG1402 Uncharacterized protein putative amidase; InterPro IPR003785; KEGG: psl:Psta_1670 creatininase; PFAM: Creatininase; SPTR: Putative uncharacterized protein; PFAM: Creatinine amidohydrolase; creatininase 918355..919122 Isosphaera pallida ATCC 43644 10154768 YP_004177803.1 CDS Isop_0662 NC_014962.1 919103 920326 D COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR000866: IPR017936; KEGG: aba:Acid345_3047 electron transport protein SCO1/SenC; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Electron transport protein SCO1/SenC; PFAM: Copper binding periplasmic protein CusF; SCO1/SenC; alkyl hydroperoxide reductase 919103..920326 Isosphaera pallida ATCC 43644 10154769 YP_004177804.1 CDS Isop_0663 NC_014962.1 920497 920901 D KEGG: vap:Vapar_2637 asparaginase; SPTR: Bud20p; hypothetical protein 920497..920901 Isosphaera pallida ATCC 43644 10154770 YP_004177805.1 CDS Isop_0664 NC_014962.1 921169 922287 D KEGG: cya:CYA_0440 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 921169..922287 Isosphaera pallida ATCC 43644 10154771 YP_004177806.1 CDS Isop_0665 NC_014962.1 922495 923592 D COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006140; KEGG: ttr:Tter_1328 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; SPTR: Dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 922495..923592 Isosphaera pallida ATCC 43644 10154772 YP_004177807.1 CDS Isop_0666 NC_014962.1 923766 925577 D KEGG: ade:Adeh_4091 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase; hypothetical protein 923766..925577 Isosphaera pallida ATCC 43644 10154773 YP_004177808.1 CDS Isop_0667 NC_014962.1 925671 926111 D KEGG: mav:MAV_3625 hypothetical protein; SPTR: (Dimethylallyl)adenosine tRNA methylthiotransferase miaB; hypothetical protein 925671..926111 Isosphaera pallida ATCC 43644 10154774 YP_004177809.1 CDS Isop_0668 NC_014962.1 926203 929946 D COGs: COG1410 Methionine synthase I cobalamin-binding domain; InterProIPR003726: IPR000489: IPR003759: IPR006158: IPR 004223: IPR011822; KEGG: scl:sce5871 methionine synthase; PFAM: homocysteine S-methyltransferase; dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; Vitamin B12 dependent methionine synthase activation region; SPTR: Methionine synthase; TIGRFAM: methionine synthase; PFAM: Pterin binding enzyme; Vitamin B12 dependent methionine synthase, activation domain; B12 binding domain; Homocysteine S-methyltransferase; TIGRFAM: methylmalonyl-CoA mutase C-terminal domain; 5-methyltetrahydrofolate--homocysteine methyltransferase; methionine synthase (B12-dependent) 926203..929946 Isosphaera pallida ATCC 43644 10154775 YP_004177810.1 CDS Isop_0669 NC_014962.1 930143 931630 D COGs: COG0541 Signal recognition particle GTPase; InterProIPR013822: IPR000897: IPR004125: IPR004780: IPR 003593; KEGG: plm:Plim_0181 signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; Signal peptide binding (SRP54) M- domain protein; SMART: AAA ATPase; SPTR: Signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle-docking protein FtsY; signal recognition particle protein; signal recognition particle subunit FFH/SRP54 (srp54) 930143..931630 Isosphaera pallida ATCC 43644 10154776 YP_004177811.1 CDS Isop_0670 NC_014962.1 931863 932411 D COGs: COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A); InterPro IPR000440; KEGG: psl:Psta_0743 NADH-ubiquinone/plastoquinone oxidoreductase chain 3; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; SPTR: NADH-quinone oxidoreductase subunit; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; NADH-ubiquinone/plastoquinone oxidoreductase chain 3 931863..932411 Isosphaera pallida ATCC 43644 10154777 YP_004177812.1 CDS Isop_0671 NC_014962.1 932402 933145 D COGs: COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductase; InterPro IPR006137: IPR006138; KEGG: psl:Psta_0742 NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH-quinone oxidoreductase, B subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; NADH-quinone oxidoreductase subunit B 932402..933145 Isosphaera pallida ATCC 43644 10154778 YP_004177813.1 CDS Isop_0672 NC_014962.1 933335 933919 D COGs: COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit; InterPro IPR001268: IPR010218: IPR020396; KEGG: plm:Plim_3858 NADH dehydrogenase (ubiquinone) 30 kDa subunit; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; SPTR: NADH dehydrogenase (Ubiquinone) 30 kDa subunit; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; NADH dehydrogenase subunit C 933335..933919 Isosphaera pallida ATCC 43644 10154779 YP_004177814.1 CDS Isop_0673 NC_014962.1 934097 935338 D COGs: COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7; InterPro IPR001135; KEGG: psl:Psta_0740 NADH dehydrogenase (quinone); PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH dehydrogenase (Quinone); PFAM: Respiratory-chain NADH dehydrogenase, 49 Kd subunit; NADH dehydrogenase (quinone) 934097..935338 Isosphaera pallida ATCC 43644 10154780 YP_004177815.1 CDS Isop_0674 NC_014962.1 935398 935949 D COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR002023; KEGG: psl:Psta_0739 NADH dehydrogenase (ubiquinone) 24 kDa subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; SPTR: NADH dehydrogenase (Ubiquinone) 24 kDa subunit; PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; NADH dehydrogenase subunit E 935398..935949 Isosphaera pallida ATCC 43644 10154781 YP_004177816.1 CDS Isop_0676 NC_014962.1 936638 937702 D COGs: COG3386 Gluconolactonase; InterPro IPR005511: IPR013658; KEGG: plm:Plim_3928 gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE-like region-containing protein; PRIAM: Gluconolactonase; SPTR: Gluconolactonase (Precursor); PFAM: SMP-30/Gluconolaconase/LRE-like region; gluconolactonase 936638..937702 Isosphaera pallida ATCC 43644 10154783 YP_004177817.1 CDS Isop_0677 NC_014962.1 937944 939797 D COGs: COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component); InterProIPR006318: IPR008731: IPR008279: IPR000121: IPR 018274; KEGG: psl:Psta_1586 phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; SPTR: Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; phosphoenolpyruvate-protein phosphotransferase 937944..939797 Isosphaera pallida ATCC 43644 10154784 YP_004177818.1 CDS Isop_0678 NC_014962.1 939861 941411 D COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590: IPR016160; KEGG: cai:Caci_5460 aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: Aldehyde Dehydrogenase; PFAM: Aldehyde dehydrogenase family; aldehyde dehydrogenase 939861..941411 Isosphaera pallida ATCC 43644 10154785 YP_004177819.1 CDS Isop_0679 NC_014962.1 941642 941833 R InterPro IPR001911; KEGG: psl:Psta_3640 ribosomal protein S21; PFAM: ribosomal protein S21; SPTR: 30S ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21; 30S ribosomal protein S21 complement(941642..941833) Isosphaera pallida ATCC 43644 10154786 YP_004177820.1 CDS Isop_0680 NC_014962.1 942436 943380 R COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013217; KEGG: pab:PAB1765 menaquinone biosynthesis methlytransferase related; PFAM: Methyltransferase type 12; SPTR: Putative uncharacterized protein; PFAM: Methyltransferase domain; type 12 methyltransferase complement(942436..943380) Isosphaera pallida ATCC 43644 10154787 YP_004177821.1 CDS Isop_0681 NC_014962.1 943507 945054 R COGs: COG3693 Beta-1 4-xylanase; KEGG: plm:Plim_3847 glycoside hydrolase family 10; SPTR: Glycoside hydrolase family 10; glycoside hydrolase family protein complement(943507..945054) Isosphaera pallida ATCC 43644 10154788 YP_004177822.1 CDS Isop_0682 NC_014962.1 945041 946075 R COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR006139: IPR006140; KEGG: mta:Moth_1954 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; SPTR: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein complement(945041..946075) Isosphaera pallida ATCC 43644 10154789 YP_004177823.1 CDS Isop_0683 NC_014962.1 946329 947663 R COGs: COG0460 Homoserine dehydrogenase; InterProIPR005106: IPR001342: IPR002912: IPR016204: IPR 019811; KEGG: rba:RB8510 homoserine dehydrogenase; PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; amino acid-binding ACT domain protein; SPTR: Homoserine dehydrogenase; PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain; ACT domain; homoserine dehydrogenase complement(946329..947663) Isosphaera pallida ATCC 43644 10154790 YP_004177824.1 CDS Isop_0684 NC_014962.1 947829 947963 R hypothetical protein complement(947829..947963) Isosphaera pallida ATCC 43644 10154791 YP_004177825.1 CDS Isop_0685 NC_014962.1 948030 948290 D KEGG: rpb:RPB_3001 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 948030..948290 Isosphaera pallida ATCC 43644 10154792 YP_004177826.1 CDS Isop_0686 NC_014962.1 948699 949733 D InterPro IPR012902: IPR001120; KEGG: psl:Psta_1428 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 948699..949733 Isosphaera pallida ATCC 43644 10154793 YP_004177827.1 CDS Isop_0687 NC_014962.1 950340 950600 D InterPro IPR003369; KEGG: plm:Plim_2724 twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; SPTR: Putative Sec-independent protein translocase component; PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family; sec-independent translocation protein mttA/Hcf106 950340..950600 Isosphaera pallida ATCC 43644 10154794 YP_004177828.1 CDS Isop_0688 NC_014962.1 950715 951086 D COGs: COG1826 Sec-independent protein secretion pathway components; InterPro IPR003369: IPR006312; KEGG: dge:Dgeo_1396 twin arginine-targeting protein translocase; PFAM: sec-independent translocation protein mttA/Hcf106; SPTR: Putative Sec-independent protein translocase component; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family; twin-arginine translocation protein, TatA/E family subunit 950715..951086 Isosphaera pallida ATCC 43644 10154795 YP_004177829.1 CDS Isop_0689 NC_014962.1 951486 953744 D COGs: COG0441 Threonyl-tRNA synthetase; InterProIPR018158: IPR004095: IPR012947: IPR002314: IPR 004154: IPR002320: IPR006195; KEGG: plm:Plim_4204 threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Threonyl/alanyl tRNA synthetase SAD; TGS domain-containing protein; Anticodon-binding domain protein; SPTR: Threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TGS domain; TIGRFAM: threonyl-tRNA synthetase; Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase 951486..953744 Isosphaera pallida ATCC 43644 10154796 YP_004177830.1 CDS Isop_0690 NC_014962.1 953816 955165 D COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR001789: IPR010822: IPR001932; KEGG: sus:Acid_4295 response regulator receiver modulated serine phosphatase; PFAM: Stage II sporulation protein E; response regulator receiver; SMART: protein phosphatase 2C domain protein; response regulator receiver; SPTR: Response regulator receiver modulated serine phosphatase; PFAM: Response regulator receiver domain; Stage II sporulation protein E (SpoIIE); response regulator receiver modulated serine phosphatase 953816..955165 Isosphaera pallida ATCC 43644 10154797 YP_004177831.1 CDS Isop_0691 NC_014962.1 955623 956066 D InterPro IPR003594; KEGG: azl:AZL_018000 hypothetical protein; PFAM: ATP-binding region ATPase domain protein; SPTR: Putative uncharacterized protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; ATP-binding protein 955623..956066 Isosphaera pallida ATCC 43644 10154798 YP_004177832.1 CDS Isop_0692 NC_014962.1 956332 956685 D InterPro IPR002645: IPR003658; KEGG: mbn:Mboo_1159 anti-sigma-factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; anti-anti-sigma factor 956332..956685 Isosphaera pallida ATCC 43644 10154799 YP_004177833.1 CDS Isop_0693 NC_014962.1 957126 958154 D COGs: COG0714 MoxR-like ATPase; InterPro IPR011703: IPR016366; KEGG: plm:Plim_4014 ATPase associated with various cellular activities AAA_3; PFAM: ATPase associated with various cellular activities AAA_3; SPTR: ATPase associated with various cellular activities AAA_3; PFAM: ATPase family associated with various cellular activities (AAA); ATPase 957126..958154 Isosphaera pallida ATCC 43644 10154800 YP_004177834.1 CDS Isop_0694 NC_014962.1 958266 959684 D COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: psl:Psta_1578 protein of unknown function DUF58; PFAM: protein of unknown function DUF58; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF58; hypothetical protein 958266..959684 Isosphaera pallida ATCC 43644 10154801 YP_004177835.1 CDS Isop_0695 NC_014962.1 959774 962065 D COGs: COG1305 Transglutaminase-like protein; InterPro IPR002931; KEGG: plm:Plim_1293 transglutaminase domain protein; PFAM: transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein; SPTR: Transglutaminase domain protein; PFAM: Transglutaminase-like superfamily; Domain of unknown function (DUF3488); transglutaminase domain-containing protein 959774..962065 Isosphaera pallida ATCC 43644 10154802 YP_004177836.1 CDS Isop_0696 NC_014962.1 962082 963446 D COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: plm:Plim_4196 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase 962082..963446 Isosphaera pallida ATCC 43644 10154803 YP_004177837.1 CDS Isop_0697 NC_014962.1 963469 963864 R KEGG: bge:BC1002_5539 mammalian cell entry related domain protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(963469..963864) Isosphaera pallida ATCC 43644 10154804 YP_004177838.1 CDS Isop_0698 NC_014962.1 963927 966923 R COGs: COG1201 Lhr-like helicase; InterProIPR011545: IPR001650: IPR013701: IPR014001: IPR 014021: IPR017170; KEGG: tga:TGAM_0576 ATP-dependent helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DEAD/H associated domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: ATP-dependent helicase, lhr-like protein (Lhr); PFAM: Helicase conserved C-terminal domain; DEAD/H associated; DEAD/DEAH box helicase; DEAD/DEAH box helicase complement(963927..966923) Isosphaera pallida ATCC 43644 10154805 YP_004177839.1 CDS Isop_0699 NC_014962.1 967125 967427 R KEGG: tca:100141858 similar to broad-complex; SPTR: ORF87; hypothetical protein complement(967125..967427) Isosphaera pallida ATCC 43644 10154806 YP_004177840.1 CDS Isop_0700 NC_014962.1 967782 969038 D COGs: COG2041 Sulfite oxidase; InterPro IPR008335: IPR000572: IPR005066: IPR017909; KEGG: sus:Acid_7248 sulfite dehydrogenase (cytochrome) subunit SorA apoprotein; PFAM: oxidoreductase molybdopterin binding; Mo-co oxidoreductase dimerisation domain; SPTR: Sulfite dehydrogenase (Cytochrome) subunit SorA apoprotein; PFAM: Mo-co oxidoreductase dimerisation domain; Oxidoreductase molybdopterin binding domain; oxidoreductase molybdopterin-binding protein 967782..969038 Isosphaera pallida ATCC 43644 10154807 YP_004177841.1 CDS Isop_0701 NC_014962.1 969156 970322 D COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: pca:Pcar_2305 glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Glycosyltransferase; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase 969156..970322 Isosphaera pallida ATCC 43644 10154808 YP_004177842.1 CDS Isop_0702 NC_014962.1 970949 972760 D InterPro IPR013766: IPR017936; KEGG: rba:RB5782 thioredoxin; PFAM: Thioredoxin domain-containing protein; SPTR: Probable thioredoxin; PFAM: Thioredoxin; thioredoxin domain-containing protein 970949..972760 Isosphaera pallida ATCC 43644 10154809 YP_004177843.1 CDS Isop_0703 NC_014962.1 972968 973315 R COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: psl:Psta_4489 nitrogen regulatory protein P-II; PFAM: nitrogen regulatory protein P-II; SPTR: Nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein P-II; nitrogen regulatory protein P-II complement(972968..973315) Isosphaera pallida ATCC 43644 10154810 YP_004177844.1 CDS Isop_0704 NC_014962.1 973546 975744 R COGs: COG3968 Uncharacterized protein related to glutamine synthetase; InterPro IPR008146; KEGG: psl:Psta_1753 glutamine synthetase catalytic region; PFAM: glutamine synthetase catalytic region; SPTR: Glutamine synthetase, type III; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase type III N terminal; L-glutamine synthetase complement(973546..975744) Isosphaera pallida ATCC 43644 10154811 YP_004177845.1 CDS Isop_0705 NC_014962.1 976419 976715 R KEGG: mgi:Mflv_4416 hypothetical protein; SPTR: Transcription factor TFIID complex subunit Taf11; hypothetical protein complement(976419..976715) Isosphaera pallida ATCC 43644 10154812 YP_004177846.1 CDS Isop_0706 NC_014962.1 977516 989095 R InterPro IPR011506: IPR000209: IPR011459: IPR006626; KEGG: mar:MAE_50880 hypothetical protein; PFAM: protein of unknown function DUF1565; Planctomycete extracellular domain protein; peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: Peptidase families S8 and S53 domain protein; PFAM: Protein of unknown function (DUF1565); Subtilase family; hypothetical protein complement(977516..989095) Isosphaera pallida ATCC 43644 10154813 YP_004177847.1 CDS Isop_0707 NC_014962.1 989578 990207 R COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005833: IPR005834: IPR006402; KEGG: spe:Spro_4879 phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; Epoxide hydrolase N-terminal domain-like phosphatase; HAD-superfamily hydrolase complement(989578..990207) Isosphaera pallida ATCC 43644 10154814 YP_004177848.1 CDS Isop_0708 NC_014962.1 990483 993134 R COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR001270: IPR004176: IPR003959: IPR013093: IPR 019489: IPR017730: IPR003593: IPR018368; KEGG: psl:Psta_0837 ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; SMART: AAA ATPase; SPTR: ATP-dependent chaperone ClpB; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB; ATP-dependent chaperone ClpB complement(990483..993134) Isosphaera pallida ATCC 43644 10154815 YP_004177849.1 CDS Isop_0709 NC_014962.1 993567 995477 R COGs: COG0443 Molecular chaperone; InterPro IPR012725: IPR001023: IPR013126: IPR018181; KEGG: plm:Plim_2047 chaperone protein DnaK; PFAM: Heat shock protein 70; SPTR: Chaperone protein dnaK; TIGRFAM: chaperone protein DnaK; PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK; chaperone protein DnaK complement(993567..995477) Isosphaera pallida ATCC 43644 10154816 YP_004177850.1 CDS Isop_0710 NC_014962.1 995843 999130 R COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036: IPR004764; KEGG: sfu:Sfum_3922 hydrophobe/amphiphile efflux-1 (HAE1) family protein; PFAM: acriflavin resistance protein; SPTR: Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(995843..999130) Isosphaera pallida ATCC 43644 10154817 YP_004177851.1 CDS Isop_0711 NC_014962.1 999158 1000612 R COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: dvm:DvMF_0035 efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter MFP subunit complement(999158..1000612) Isosphaera pallida ATCC 43644 10154818 YP_004177852.1 CDS Isop_0712 NC_014962.1 1000871 1001572 R InterPro IPR001647; KEGG: gsu:GSU2666 TetR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family; regulatory protein TetR complement(1000871..1001572) Isosphaera pallida ATCC 43644 10154819 YP_004177853.1 CDS Isop_0713 NC_014962.1 1002040 1003200 D COGs: COG0077 Prephenate dehydratase; InterProIPR020822: IPR001086: IPR002912: IPR010957: IPR 002701: IPR008242; KEGG: plm:Plim_2048 prephenate dehydratase; PFAM: prephenate dehydratase; Chorismate mutase, type II; amino acid-binding ACT domain protein; SPTR: Prephenate dehydratase; TIGRFAM: chorismate mutase; PFAM: Prephenate dehydratase; Chorismate mutase type II; TIGRFAM: chorismate mutase domain of proteobacterial P-protein, clade 2; chorismate mutase 1002040..1003200 Isosphaera pallida ATCC 43644 10154820 YP_004177854.1 CDS Isop_0714 NC_014962.1 1003417 1004685 D COGs: COG0673 dehydrogenase and related protein; InterProIPR000683: IPR004104: IPR006311: IPR017909: IPR 017970; KEGG: sus:Acid_3950 oxidoreductase domain-containing protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase domain-containing protein 1003417..1004685 Isosphaera pallida ATCC 43644 10154821 YP_004177855.1 CDS Isop_0715 NC_014962.1 1004936 1007491 D KEGG: rba:RB8980 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1559); hypothetical protein 1004936..1007491 Isosphaera pallida ATCC 43644 10154822 YP_004177856.1 CDS Isop_0716 NC_014962.1 1007526 1010168 D KEGG: rba:RB8980 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1559); hypothetical protein 1007526..1010168 Isosphaera pallida ATCC 43644 10154823 YP_004177857.1 CDS Isop_0717 NC_014962.1 1010251 1011747 R KEGG: lbz:LbrM22_V2.1600 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1010251..1011747) Isosphaera pallida ATCC 43644 10154824 YP_004177858.1 CDS Isop_0718 NC_014962.1 1011887 1012228 R KEGG: dac:Daci_4306 NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; hypothetical protein complement(1011887..1012228) Isosphaera pallida ATCC 43644 10154825 YP_004177859.1 CDS Isop_0719 NC_014962.1 1012366 1014159 R COGs: COG0515 Serine/threonine protein kinase; InterProIPR017442: IPR002290: IPR020635: IPR000719: IPR 001789: IPR008271; KEGG: psl:Psta_1859 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain; Response regulator receiver domain; serine/threonine protein kinase complement(1012366..1014159) Isosphaera pallida ATCC 43644 10154826 YP_004177860.1 CDS Isop_0720 NC_014962.1 1014790 1015179 R COGs: COG0724 RNA-binding protein (RRM domain); InterPro IPR000504; KEGG: plm:Plim_1587 RNP-1 like RNA-binding protein; PFAM: RNP-1 like RNA-binding protein; SMART: RNP-1 like RNA-binding protein; SPTR: RNP-1 like RNA-binding protein; PFAM: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); RNP-1 like RNA-binding protein complement(1014790..1015179) Isosphaera pallida ATCC 43644 10154827 YP_004177861.1 CDS Isop_0721 NC_014962.1 1015428 1016657 R KEGG: psl:Psta_0112 glycosyl transferase family 39; SPTR: Putative uncharacterized protein; glycosyl transferase family protein complement(1015428..1016657) Isosphaera pallida ATCC 43644 10154828 YP_004177862.1 CDS Isop_0722 NC_014962.1 1016854 1021551 R InterPro IPR001440: IPR019734: IPR013026: IPR019794; KEGG: ade:Adeh_2705 response regulator receiver; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Response regulator receiver; hypothetical protein complement(1016854..1021551) Isosphaera pallida ATCC 43644 10154829 YP_004177863.1 CDS Isop_0723 NC_014962.1 1022090 1023100 D COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR006139: IPR006140; KEGG: sfu:Sfum_3136 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; PRIAM: Phosphoglycerate dehydrogenase; SPTR: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; phosphoglycerate dehydrogenase 1022090..1023100 Isosphaera pallida ATCC 43644 10154830 YP_004177864.1 CDS Isop_0724 NC_014962.1 1023240 1024700 D COGs: COG0415 Deoxyribodipyrimidine photolyase; InterPro IPR006050: IPR005101; KEGG: aca:ACP_1875 deoxyribodipyrimidine photolyase; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; SPTR: Deoxyribodipyrimidine photolyase; PFAM: FAD binding domain of DNA photolyase; DNA photolyase; TIGRFAM: photolyase PhrII; DNA photolyase FAD-binding protein 1023240..1024700 Isosphaera pallida ATCC 43644 10154831 YP_004177865.1 CDS Isop_0725 NC_014962.1 1024654 1025676 D KEGG: rba:RB5663 signal peptide; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1570); hypothetical protein 1024654..1025676 Isosphaera pallida ATCC 43644 10154832 YP_004177866.1 CDS Isop_0726 NC_014962.1 1025731 1026759 R COGs: COG0515 Serine/threonine protein kinase; InterPro IPR017442: IPR020635: IPR002290: IPR000719; KEGG: plm:Plim_1234 serine/threonine protein kinase-related protein; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase-related protein; PFAM: Protein kinase domain; serine/threonine protein kinase complement(1025731..1026759) Isosphaera pallida ATCC 43644 10154833 YP_004177867.1 CDS Isop_0727 NC_014962.1 1027499 1029118 D KEGG: rba:RB4576 signal peptide; SPTR: Putative uncharacterized protein; hypothetical protein 1027499..1029118 Isosphaera pallida ATCC 43644 10154834 YP_004177868.1 CDS Isop_0728 NC_014962.1 1029921 1030604 D KEGG: plm:Plim_0783 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1029921..1030604 Isosphaera pallida ATCC 43644 10154835 YP_004177869.1 CDS Isop_0729 NC_014962.1 1030800 1031804 D KEGG: plm:Plim_3460 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1030800..1031804 Isosphaera pallida ATCC 43644 10154836 YP_004177870.1 CDS Isop_0730 NC_014962.1 1031930 1032982 R COGs: COG3221 ABC-type phosphate/phosphonate transport system periplasmic component; InterPro IPR005770; KEGG: cyb:CYB_0011 putative phosphonate ABC transporter, phosphonate-binding protein; SPTR: Putative phosphonate ABC transporter, phosphonate-binding protein; TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; TIGRFAM: phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein; phosphonate ABC transporter periplasmic phosphonate-binding protein complement(1031930..1032982) Isosphaera pallida ATCC 43644 10154837 YP_004177871.1 CDS Isop_0731 NC_014962.1 1033961 1035766 D COGs: COG0481 Membrane GTPase LepA; InterProIPR006297: IPR000795: IPR004161: IPR000640: IPR 013842: IPR005225; KEGG: plm:Plim_3466 GTP-binding protein LepA; PFAM: GTP-binding protein LepA domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein; SPTR: GTP-binding protein lepA; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain; GTP-binding protein LepA 1033961..1035766 Isosphaera pallida ATCC 43644 10154838 YP_004177872.1 CDS Isop_0732 NC_014962.1 1035772 1037379 D InterPro IPR000223: IPR019759: IPR019757: IPR019758; KEGG: plm:Plim_1125 peptidase S24 and S26 domain protein; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: Probable signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; signal peptidase I 1035772..1037379 Isosphaera pallida ATCC 43644 10154839 YP_004177873.1 CDS Isop_0733 NC_014962.1 1037462 1039495 D InterPro IPR000223: IPR019759: IPR019757: IPR019758; KEGG: plm:Plim_1125 peptidase S24 and S26 domain protein; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: Peptidase S24 and S26 domain protein; PFAM: Peptidase S24-like; peptidase S24/S26A/S26B 1037462..1039495 Isosphaera pallida ATCC 43644 10154840 YP_004177874.1 CDS Isop_0734 NC_014962.1 1039620 1040735 D COGs: COG1137 ABC-type (unclassified) transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: psl:Psta_0620 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter; ABC transporter-like protein 1039620..1040735 Isosphaera pallida ATCC 43644 10154841 YP_004177875.1 CDS Isop_0735 NC_014962.1 1040833 1042518 R InterPro IPR001330: IPR004155; KEGG: psl:Psta_2719 hypothetical protein; PFAM: Prenyltransferase/squalene oxidase; SMART: PBS lyase HEAT domain protein repeat-containing protein; SPTR: Putative uncharacterized protein; prenyltransferase/squalene oxidase complement(1040833..1042518) Isosphaera pallida ATCC 43644 10154842 YP_004177876.1 CDS Isop_0736 NC_014962.1 1042874 1043947 R COGs: COG2055 Malate/L-lactate dehydrogenase; InterPro IPR003767; KEGG: plm:Plim_1356 malate/L-lactate dehydrogenase; PFAM: Malate/L-lactate dehydrogenase; SPTR: Malate/L-lactate dehydrogenase; PFAM: Malate/L-lactate dehydrogenase; malate/L-lactate dehydrogenase complement(1042874..1043947) Isosphaera pallida ATCC 43644 10154843 YP_004177877.1 CDS Isop_0737 NC_014962.1 1044456 1045460 D COGs: COG2017 Galactose mutarotase; InterPro IPR008183; KEGG: plm:Plim_0702 aldose 1-epimerase; PFAM: Aldose 1-epimerase; SPTR: Aldose 1-epimerase; PFAM: Aldose 1-epimerase; aldose 1-epimerase 1044456..1045460 Isosphaera pallida ATCC 43644 10154844 YP_004177878.1 CDS Isop_0738 NC_014962.1 1045615 1045836 R KEGG: mxa:MXAN_2290 putative lipoprotein; SPTR: Putative lipoprotein; hypothetical protein complement(1045615..1045836) Isosphaera pallida ATCC 43644 10154845 YP_004177879.1 CDS Isop_0739 NC_014962.1 1045967 1047028 R InterPro IPR012902: IPR001120; KEGG: plm:Plim_0377 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein complement(1045967..1047028) Isosphaera pallida ATCC 43644 10154846 YP_004177880.1 CDS Isop_0740 NC_014962.1 1047612 1048292 R COGs: COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase; InterPro IPR003265; KEGG: msv:Mesil_1125 HhH-GPD family protein; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein; SPTR: Probable DNA-3-methyladenine glycosylase; PFAM: HhH-GPD superfamily base excision DNA repair protein; HhH-GPD family protein complement(1047612..1048292) Isosphaera pallida ATCC 43644 10154847 YP_004177881.1 CDS Isop_0741 NC_014962.1 1048289 1049302 R COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600: IPR002731; KEGG: psl:Psta_4719 ROK family protein; PFAM: ROK family protein; ATPase BadF/BadG/BcrA/BcrD type; SPTR: Glucokinase; PFAM: ROK family; TIGRFAM: ROK family protein (putative glucokinase); ROK family protein complement(1048289..1049302) Isosphaera pallida ATCC 43644 10154848 YP_004177882.1 CDS Isop_0742 NC_014962.1 1049800 1050543 D COGs: COG0799 Iojap protein; InterPro IPR004394; KEGG: plm:Plim_1339 iojap-like protein; PFAM: Iojap-related protein; SPTR: Iojap-like protein; TIGRFAM: iojap-like protein; PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein; iojap family protein 1049800..1050543 Isosphaera pallida ATCC 43644 10154849 YP_004177883.1 CDS Isop_0743 NC_014962.1 1050540 1052618 D COGs: COG0018 Arginyl-tRNA synthetase; InterProIPR001278: IPR015945: IPR005148: IPR008909: IPR 001800: IPR001412; KEGG: psl:Psta_0209 arginyl-tRNA synthetase; PFAM: Arginyl-tRNA synthetase, class Ic, core; arginyl tRNA synthetase domain protein; DALR anticodon binding domain protein; PRIAM: Arginine--tRNA ligase; SPTR: Arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase; PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase; arginyl-tRNA synthetase 1050540..1052618 Isosphaera pallida ATCC 43644 10154850 YP_004177884.1 CDS Isop_0744 NC_014962.1 1052910 1054847 D COGs: COG3391 conserved hypothetical protein; InterPro IPR011964: IPR009056; KEGG: psl:Psta_0767 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: Cytochrome c; Di-haem cytochrome c peroxidase; 3-carboxy-cis,cis-muconate lactonizing enzyme; TIGRFAM: 40-residue YVTN family beta-propeller repeat; 40-residue YVTN family beta-propeller repeat-containing protein 1052910..1054847 Isosphaera pallida ATCC 43644 10154851 YP_004177885.1 CDS Isop_0745 NC_014962.1 1055053 1055619 R KEGG: psl:Psta_2460 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1055053..1055619) Isosphaera pallida ATCC 43644 10154852 YP_004177886.1 CDS Isop_0746 NC_014962.1 1056215 1056712 D KEGG: tai:Taci_1732 protein of unknown function UPF0118; SPTR: Phosphatidylglycerophosphatase, putative; hypothetical protein 1056215..1056712 Isosphaera pallida ATCC 43644 10154853 YP_004177887.1 CDS Isop_0747 NC_014962.1 1056703 1057167 R COGs: COG1716 FOG: FHA domain; InterPro IPR000253; KEGG: plm:Plim_2211 forkhead-associated protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: Forkhead-associated protein; PFAM: FHA domain; FHA domain-containing protein complement(1056703..1057167) Isosphaera pallida ATCC 43644 10154854 YP_004177888.1 CDS Isop_0748 NC_014962.1 1057207 1057377 D KEGG: cbt:CLH_0103 prolipoprotein diacylglyceryl transferase; SPTR: Prolipoprotein diacylglyceryl transferase; hypothetical protein 1057207..1057377 Isosphaera pallida ATCC 43644 10154855 YP_004177889.1 CDS Isop_0749 NC_014962.1 1057578 1058291 D InterPro IPR005632; KEGG: plm:Plim_0920 outer membrane chaperone Skp (OmpH); PFAM: outer membrane chaperone Skp (OmpH); SPTR: Outer membrane chaperone Skp (OmpH); PFAM: Outer membrane protein (OmpH-like); outer membrane chaperone Skp 1057578..1058291 Isosphaera pallida ATCC 43644 10154856 YP_004177890.1 CDS Isop_0750 NC_014962.1 1058602 1059948 D COGs: COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase; InterPro IPR010084: IPR004463: IPR013114; KEGG: gau:GAU_1588 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; SPTR: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; UDP-3-0-acyl N-acetylglucosamine deacetylase; PFAM: FabA-like domain; UDP-3-O-acyl N-acetylglycosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 1058602..1059948 Isosphaera pallida ATCC 43644 10154857 YP_004177891.1 CDS Isop_0751 NC_014962.1 1060063 1061076 D COGs: COG1043 Acyl-(acyl carrier protein); InterPro IPR001451: IPR010137: IPR018357; KEGG: psl:Psta_3189 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosa mineO-acyltransferase; PFAM: transferase hexapeptide repeat containing protein; PRIAM:Acyl-[acyl-carrier-protein]--UDP-N-acetylgluc osamineO-acyltransferase; SPTR:Acyl-(Acyl-carrier-protein)--UDP-N-acetylgluco samineO-acyltransferase; TIGRFAM:acyl-[acyl-carrier-protein]--UDP-N-acetylgl ucosamineO-acyltransferase; PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase 1060063..1061076 Isosphaera pallida ATCC 43644 10154858 YP_004177892.1 CDS Isop_0752 NC_014962.1 1061195 1062388 D COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: plm:Plim_0917 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Similar to 1-carboxy-3-chloro-3,4-dihydroxycyclohexa-1, 5-diene dehydrogenase; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase domain-containing protein 1061195..1062388 Isosphaera pallida ATCC 43644 10154859 YP_004177893.1 CDS Isop_0753 NC_014962.1 1062711 1064354 D KEGG: rba:RB2304 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1062711..1064354 Isosphaera pallida ATCC 43644 10154860 YP_004177894.1 CDS Isop_0754 NC_014962.1 1064428 1065591 D COGs: COG1985 Pyrimidine reductase riboflavin biosynthesis; InterProIPR002125: IPR002734: IPR004794: IPR011549: IPR 016192; KEGG: psl:Psta_1878 riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding; PRIAM: Diaminohydroxyphosphoribosylaminopyrimidine deaminase., 5-amino-6-(5-phosphoribosylamino)uracil reductase; SPTR: Riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD; diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase 1064428..1065591 Isosphaera pallida ATCC 43644 10154861 YP_004177895.1 CDS Isop_0755 NC_014962.1 1065646 1068708 R InterPro IPR013428: IPR013427: IPR009056; KEGG: psl:Psta_0498 membrane-bound dehydrogenase domain protein; SPTR: Membrane-bound dehydrogenase domain protein; TIGRFAM: membrane-bound dehydrogenase domain protein; heme-binding protein; PFAM: Cytochrome c; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type; membrane-bound dehydrogenase domain-containing protein complement(1065646..1068708) Isosphaera pallida ATCC 43644 10154862 YP_004177896.1 CDS Isop_0756 NC_014962.1 1068911 1069639 R COGs: COG0274 Deoxyribose-phosphate aldolase; InterPro IPR002915: IPR011343; KEGG: rba:RB6729 deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; PRIAM: Deoxyribose-phosphate aldolase; SPTR: Deoxyribose-phosphate aldolase; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: DeoC/LacD family aldolase; TIGRFAM: deoxyribose-phosphate aldolase; deoxyribose-phosphate aldolase complement(1068911..1069639) Isosphaera pallida ATCC 43644 10154863 YP_004177897.1 CDS Isop_0757 NC_014962.1 1069726 1070640 R InterPro IPR010496; KEGG: caa:Caka_0473 protein of unknown function DUF1080; PFAM: protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF1080); hypothetical protein complement(1069726..1070640) Isosphaera pallida ATCC 43644 10154864 YP_004177898.1 CDS Isop_0758 NC_014962.1 1071034 1072089 D KEGG: rba:RB6409 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3500); hypothetical protein 1071034..1072089 Isosphaera pallida ATCC 43644 10154865 YP_004177899.1 CDS Isop_0759 NC_014962.1 1072339 1073757 R InterPro IPR010869: IPR017909; KEGG: psl:Psta_2356 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501); hypothetical protein complement(1072339..1073757) Isosphaera pallida ATCC 43644 10154866 YP_004177900.1 CDS Isop_0760 NC_014962.1 1073868 1074383 R InterPro IPR000638: IPR018493; KEGG: sma:SAV_1884 gas vesicle synthesis protein; PFAM: gas vesicle protein GVPa; SPTR: Gas vesicle protein; PFAM: Gas vesicle protein; gas vesicle protein GvpA complement(1073868..1074383) Isosphaera pallida ATCC 43644 10154867 YP_004177901.1 CDS Isop_0761 NC_014962.1 1074385 1074825 R InterPro IPR001305; KEGG: sen:SACE_7208 molecular chaperone; PFAM: DnaJ central domain protein; SPTR: Molecular chaperone; DnaJ central domain-containing protein complement(1074385..1074825) Isosphaera pallida ATCC 43644 10154868 YP_004177902.1 CDS Isop_0762 NC_014962.1 1074950 1075390 R InterPro IPR007805; KEGG: aba:Acid345_2406 gas vesicle K; PFAM: Gas vesicle K; SPTR: Gas vesicle protein K; PFAM: Gas vesicle protein K; gas vesicle protein K complement(1074950..1075390) Isosphaera pallida ATCC 43644 10154869 YP_004177903.1 CDS Isop_0763 NC_014962.1 1075387 1075683 R InterPro IPR000638; KEGG: pin:Ping_1260 gas vesicle protein GVPa; PFAM: gas vesicle protein GVPa; SPTR: Gas vesicle protein GVPa; PFAM: Gas vesicle protein; gas vesicle protein GvpA complement(1075387..1075683) Isosphaera pallida ATCC 43644 10154870 YP_004177904.1 CDS Isop_0764 NC_014962.1 1075655 1075969 R KEGG: lbc:LACBIDRAFT_304787 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1075655..1075969) Isosphaera pallida ATCC 43644 10154871 YP_004177905.1 CDS Isop_0765 NC_014962.1 1076042 1076353 R KEGG: pin:Ping_1259 gas vesicle protein G; SPTR: Gas vesicle protein G; PFAM: Gas vesicle protein G; gas vesicle protein G complement(1076042..1076353) Isosphaera pallida ATCC 43644 10154872 YP_004177906.1 CDS Isop_0766 NC_014962.1 1076447 1077286 R InterPro IPR009430; KEGG: mxa:MXAN_2769 GvpL/GvpF family gas vesicle protein; PFAM: Gas vesicle synthesis GvpLGvpF; SPTR: Putative gas vesicle synthesis GvpLGvpF; PFAM: Gas vesicle synthesis protein GvpL/GvpF; gas vesicle synthesis protein GvpLGvpF complement(1076447..1077286) Isosphaera pallida ATCC 43644 10154873 YP_004177907.1 CDS Isop_0767 NC_014962.1 1077507 1077932 R KEGG: xcv:XCV2837 translation initiation factor IF-2; SPTR: Translation initiation factor IF-2; hypothetical protein complement(1077507..1077932) Isosphaera pallida ATCC 43644 10154874 YP_004177908.1 CDS Isop_0768 NC_014962.1 1077916 1078953 R COGs: COG0714 MoxR-like ATPase; InterPro IPR011704: IPR013462: IPR003593; KEGG: cya:CYA_0826 gas vesicle protein GvpN; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; SPTR: Gas vesicle protein GvpN; TIGRFAM: gas vesicle protein GvpN; PFAM: AAA domain (dynein-related subfamily); CbbQ/NirQ/NorQ C-terminal; TIGRFAM: gas vesicle protein GvpN; gas vesicle protein GvpN complement(1077916..1078953) Isosphaera pallida ATCC 43644 10154875 YP_004177909.1 CDS Isop_0769 NC_014962.1 1079253 1079975 R KEGG: nca:Noca_1794 hypothetical protein; SPTR: Predicted protein; hypothetical protein complement(1079253..1079975) Isosphaera pallida ATCC 43644 10154876 YP_004177910.1 CDS Isop_0770 NC_014962.1 1080126 1080344 R InterPro IPR000638: IPR018493; KEGG: pin:Ping_1748 gas vesicle synthesis protein GvpA; PFAM: gas vesicle protein GVPa; SPTR: Gas vesicle protein; PFAM: Gas vesicle protein; gas vesicle protein GvpA complement(1080126..1080344) Isosphaera pallida ATCC 43644 10154877 YP_004177911.1 CDS Isop_0771 NC_014962.1 1080715 1081668 R COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002347: IPR002198; KEGG: syx:SynWH7803_2446 short-chain dehydrogenase/reductase of unknown specificity; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase (SDR) superfamily protein; PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(1080715..1081668) Isosphaera pallida ATCC 43644 10154878 YP_004177912.1 CDS Isop_0772 NC_014962.1 1081687 1083291 R COGs: COG0076 Glutamate decarboxylase and related PLP-dependent protein; InterPro IPR002129; KEGG: mca:MCA2806 pyridoxal-dependent decarboxylase domain-containing protein; PFAM: Pyridoxal-dependent decarboxylase; SPTR: Pyridoxal-dependent decarboxylase domain protein; PFAM: Pyridoxal-dependent decarboxylase conserved domain; pyridoxal-dependent decarboxylase complement(1081687..1083291) Isosphaera pallida ATCC 43644 10154879 YP_004177913.1 CDS Isop_0773 NC_014962.1 1083620 1084321 R InterPro IPR011449: IPR013424; KEGG: cte:CT1750 hypothetical protein; PFAM: protein of unknown function DUF1555; SPTR: Endonuclease/exonuclease/phosphatase; hypothetical protein complement(1083620..1084321) Isosphaera pallida ATCC 43644 10154880 YP_004177914.1 CDS Isop_0774 NC_014962.1 1084616 1087264 R InterPro IPR007312; KEGG: bts:Btus_0523 40-residue YVTN family beta-propeller repeat protein; PFAM: phosphoesterase; SPTR: Phosphoesterase; PFAM: Phosphoesterase family; phosphoesterase complement(1084616..1087264) Isosphaera pallida ATCC 43644 10154881 YP_004177915.1 CDS Isop_0775 NC_014962.1 1087796 1088038 R KEGG: bta:539055 tetraspanin 14; SPTR: Tetraspanin 14; hypothetical protein complement(1087796..1088038) Isosphaera pallida ATCC 43644 10154882 YP_004177916.1 CDS Isop_0776 NC_014962.1 1088063 1088944 R COGs: COG1234 Metal-dependent hydrolase of the beta-lactamase superfamily III; KEGG: plm:Plim_2995 Nuz; SPTR: Putative uncharacterized protein; Metal-dependent hydrolase of the beta-lactamase superfamily III complement(1088063..1088944) Isosphaera pallida ATCC 43644 10154883 YP_004177917.1 CDS Isop_0777 NC_014962.1 1089041 1089697 R COGs: COG2993 Cbb3-type cytochrome oxidase cytochrome c subunit; InterPro IPR003468: IPR009056; KEGG: min:Minf_1953 Cbb3-type cytochrome oxidase, cytochrome c subunit; PFAM: cytochrome C oxidase mono-heme subunit/FixO; SPTR: Cytochrome C oxidase, mono-heme subunit/FixO superfamily; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; cytochrome C oxidase mono-heme subunit/FixO complement(1089041..1089697) Isosphaera pallida ATCC 43644 10154884 YP_004177918.1 CDS Isop_0778 NC_014962.1 1089912 1090268 R KEGG: ncr:NCU03263 similar to transmembrane protein; SPTR: Peptidoglycan-binding LysM; hypothetical protein complement(1089912..1090268) Isosphaera pallida ATCC 43644 10154885 YP_004177919.1 CDS Isop_0779 NC_014962.1 1090476 1091921 R KEGG: scl:sce7589 hypothetical protein; SPTR: Conserved hypothetical membrane protein; hypothetical protein complement(1090476..1091921) Isosphaera pallida ATCC 43644 10154886 YP_004177920.1 CDS Isop_0780 NC_014962.1 1091918 1092742 R InterPro IPR009056; KEGG: caa:Caka_0021 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Cytochrome c; hypothetical protein complement(1091918..1092742) Isosphaera pallida ATCC 43644 10154887 YP_004177921.1 CDS Isop_0781 NC_014962.1 1092749 1093297 R KEGG: scl:sce7587 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3341); hypothetical protein complement(1092749..1093297) Isosphaera pallida ATCC 43644 10154888 YP_004177922.1 CDS Isop_0782 NC_014962.1 1093297 1094784 R COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: rmr:Rmar_0223 polysulphide reductase NrfD; PFAM: Polysulphide reductase NrfD; SPTR: Polysulphide reductase NrfD; PFAM: Polysulphide reductase, NrfD; quinol:cytochrome c oxidoreductase quinone-binding subunit 1 complement(1093297..1094784) Isosphaera pallida ATCC 43644 10154889 YP_004177923.1 CDS Isop_0783 NC_014962.1 1094781 1098359 R COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR017896; KEGG: ote:Oter_3934 Fe-S-cluster-containing hydrogenase components 1-like protein; SPTR: Molybdopterin oxidoreductase, iron-sulfur binding subunit; Fe-S-cluster-containing hydrogenase components 1-like protein complement(1094781..1098359) Isosphaera pallida ATCC 43644 10154890 YP_004177924.1 CDS Isop_0784 NC_014962.1 1098356 1099009 R InterPro IPR002322: IPR011031; KEGG: caa:Caka_0017 cytochrome c family protein; SPTR: Cytochrome c family protein; PFAM: Class III cytochrome C family; Cytochrome c552; quinol:cytochrome c oxidoreductase pentaheme cytochrome subunit complement(1098356..1099009) Isosphaera pallida ATCC 43644 10154891 YP_004177925.1 CDS Isop_0785 NC_014962.1 1099296 1099448 D KEGG: aha:AHA_1433 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1099296..1099448 Isosphaera pallida ATCC 43644 10154892 YP_004177926.1 CDS Isop_0786 NC_014962.1 1099812 1100927 R COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: plm:Plim_2198 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain; oxidoreductase domain-containing protein complement(1099812..1100927) Isosphaera pallida ATCC 43644 10154893 YP_004177927.1 CDS Isop_0787 NC_014962.1 1101088 1102362 R COGs: COG0162 Tyrosyl-tRNA synthetase; InterPro IPR002307: IPR002305; KEGG: plm:Plim_2197 tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; SPTR: Tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase; tyrosyl-tRNA synthetase complement(1101088..1102362) Isosphaera pallida ATCC 43644 10154894 YP_004177928.1 CDS Isop_0788 NC_014962.1 1102745 1103839 D InterPro IPR003675; KEGG: rba:RB10877 hypothetical protein; PFAM: Abortive infection protein; SPTR: Putative uncharacterized protein; PFAM: CAAX amino terminal protease family; abortive infection protein 1102745..1103839 Isosphaera pallida ATCC 43644 10154895 YP_004177929.1 CDS Isop_0789 NC_014962.1 1104134 1104310 D KEGG: cci:CC1G_00588 GTPase activating protein; SPTR: GTPase activating protein; hypothetical protein 1104134..1104310 Isosphaera pallida ATCC 43644 10154896 YP_004177930.1 CDS Isop_0790 NC_014962.1 1104494 1110703 R COGs: COG0515 Serine/threonine protein kinase; InterProIPR017442: IPR005532: IPR020635: IPR002290: IPR 000719: IPR008271; KEGG: hoh:Hoch_0080 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; protein of unknown function DUF323; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain; Formylglycine-generating sulfatase enzyme; serine/threonine protein kinase complement(1104494..1110703) Isosphaera pallida ATCC 43644 10154897 YP_004177931.1 CDS Isop_0791 NC_014962.1 1110711 1111784 R COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR003004: IPR018076; KEGG: ank:AnaeK_0718 general secretion pathway protein F; PFAM: Type II secretion system F domain; SPTR: General secretion pathway protein F; PFAM: Bacterial type II secretion system protein F domain; type II secretion system F domain-containing protein complement(1110711..1111784) Isosphaera pallida ATCC 43644 10154898 YP_004177932.1 CDS Isop_0792 NC_014962.1 1112416 1114641 D KEGG: nfi:NFIA_014140 myosin class II heavy chain (MHC), putative; SPTR: GI11144; hypothetical protein 1112416..1114641 Isosphaera pallida ATCC 43644 10154899 YP_004177933.1 CDS Isop_0793 NC_014962.1 1114757 1115974 R KEGG: plm:Plim_2619 SH3 type 3 domain protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1114757..1115974) Isosphaera pallida ATCC 43644 10154900 YP_004177934.1 CDS Isop_0794 NC_014962.1 1116258 1117256 D COGs: COG1163 GTPase; InterPro IPR006073: IPR002917: IPR004095: IPR005225; KEGG: psl:Psta_1013 GTP-binding protein HSR1-related protein; PFAM: GTP-binding protein HSR1-related; TGS domain-containing protein; SPTR: GTP-binding protein HSR1-related protein; TIGRFAM: small GTP-binding protein; PFAM: GTPase of unknown function; TGS domain; TIGRFAM: small GTP-binding protein domain; small GTP-binding protein 1116258..1117256 Isosphaera pallida ATCC 43644 10154901 YP_004177935.1 CDS Isop_0795 NC_014962.1 1117338 1118426 D InterPro IPR003594: IPR016160; KEGG: sus:Acid_7798 response regulator receiver protein; PFAM: ATP-binding region ATPase domain protein; SPTR: Response regulator receiver protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; ATP-binding protein 1117338..1118426 Isosphaera pallida ATCC 43644 10154902 YP_004177936.1 CDS Isop_0796 NC_014962.1 1118405 1118806 R KEGG: rba:RB1138 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; PFAM: Sugar-specific transcriptional regulator TrmB; hypothetical protein complement(1118405..1118806) Isosphaera pallida ATCC 43644 10154903 YP_004177937.1 CDS Isop_0797 NC_014962.1 1118803 1121241 R COGs: COG3002 conserved hypothetical protein; InterPro IPR018752; KEGG: chl:Chy400_1924 hypothetical protein; PFAM: Protein of unknown function DUF2309; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2309); hypothetical protein complement(1118803..1121241) Isosphaera pallida ATCC 43644 10154904 YP_004177938.1 CDS Isop_0798 NC_014962.1 1121225 1122802 R COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit; InterPro IPR003916: IPR018393: IPR001516: IPR001750; KEGG: bra:BRADO2284 putative NADH dehydrogenase (NADH quinone oxidoreductase)(nuoL3-like); PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; SPTR: Putative NADH dehydrogenase (NADH quinone oxidoreductase)(NuoL3-like); PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH/ubiquinone/plastoquinone complement(1121225..1122802) Isosphaera pallida ATCC 43644 10154905 YP_004177939.1 CDS Isop_0799 NC_014962.1 1123044 1124549 R COGs: COG0247 Fe-S oxidoreductase; InterPro IPR004017: IPR017896: IPR017900; KEGG: psl:Psta_2647 protein of unknown function DUF224 cysteine-rich region domain protein; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: Putative uncharacterized protein; PFAM: Cysteine-rich domain; hypothetical protein complement(1123044..1124549) Isosphaera pallida ATCC 43644 10154906 YP_004177940.1 CDS Isop_0800 NC_014962.1 1124651 1126021 R COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR006094: IPR004113: IPR016166; KEGG: psl:Psta_2648 FAD linked oxidase domain protein; PFAM: FAD linked oxidase domain protein; SPTR: Glycolate oxidase subunit; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; FAD linked oxidase domain-containing protein complement(1124651..1126021) Isosphaera pallida ATCC 43644 10154907 YP_004177941.1 CDS Isop_0801 NC_014962.1 1126182 1127591 R KEGG: act:ACLA_069350 SH3 domain protein; SPTR: SH3 domain protein; manually curated; hypothetical protein complement(1126182..1127591) Isosphaera pallida ATCC 43644 10154908 YP_004177942.1 CDS Isop_0802 NC_014962.1 1127974 1128699 D InterPro IPR011449: IPR013424; KEGG: sus:Acid_6948 hypothetical protein; PFAM: protein of unknown function DUF1555; SPTR: Putative uncharacterized protein; PFAM: PEP-CTERM motif; TIGRFAM: PEP-CTERM putative exosortase interaction domain; hypothetical protein 1127974..1128699 Isosphaera pallida ATCC 43644 10154909 YP_004177943.1 CDS Isop_0803 NC_014962.1 1128887 1130617 R COGs: COG2509 Uncharacterized FAD-dependent dehydrogenase; InterPro IPR003042: IPR006076; KEGG: plm:Plim_3358 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: Putative uncharacterized protein; PFAM: Thi4 family; FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(1128887..1130617) Isosphaera pallida ATCC 43644 10154910 YP_004177944.1 CDS Isop_0804 NC_014962.1 1130717 1132846 R COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR000253: IPR003018: IPR010822: IPR001932; KEGG: nhl:Nhal_1223 stage II sporulation E family protein; PFAM: Stage II sporulation protein E; GAF domain protein; Forkhead-associated protein; SMART: protein phosphatase 2C domain protein; GAF domain protein; Forkhead-associated protein; SPTR: Stage II sporulation E family protein; PFAM: GAF domain; Stage II sporulation protein E (SpoIIE); FHA domain; protein serine phosphatase with GAF(s) sensor(s) complement(1130717..1132846) Isosphaera pallida ATCC 43644 10154911 YP_004177945.1 CDS Isop_0805 NC_014962.1 1132946 1133629 R KEGG: scl:sce5120 protein kinase; SPTR: Serine/threonine protein kinase; hypothetical protein complement(1132946..1133629) Isosphaera pallida ATCC 43644 10154912 YP_004177946.1 CDS Isop_0806 NC_014962.1 1133842 1134123 R KEGG: rba:RB12189 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1133842..1134123) Isosphaera pallida ATCC 43644 10154913 YP_004177947.1 CDS Isop_0807 NC_014962.1 1134740 1135243 D COGs: COG2030 Acyl dehydratase; InterPro IPR002539; KEGG: rba:RB5038 monoamine oxidase regulatory protein; PFAM: MaoC domain protein dehydratase; SPTR: Similar to monoamine oxidase regulatory protein; PFAM: MaoC like domain; MaoC domain-containing protein dehydratase 1134740..1135243 Isosphaera pallida ATCC 43644 10154914 YP_004177948.1 CDS Isop_0808 NC_014962.1 1135156 1135488 R KEGG: hmu:Hmuk_2248 O-succinylbenzoate-CoA ligase; SPTR: Putative uncharacterized protein Sb07g024970; hypothetical protein complement(1135156..1135488) Isosphaera pallida ATCC 43644 10154915 YP_004177949.1 CDS Isop_0809 NC_014962.1 1135640 1135942 D KEGG: cur:cur_1975 major facilitator superfamily permease; SPTR: Putative permease of the major facilitator superfamily; hypothetical protein 1135640..1135942 Isosphaera pallida ATCC 43644 10154916 YP_004177950.1 CDS Isop_0810 NC_014962.1 1136094 1136609 D KEGG: plm:Plim_0531 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1136094..1136609 Isosphaera pallida ATCC 43644 10154917 YP_004177951.1 CDS Isop_0811 NC_014962.1 1137203 1138282 D COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase; InterPro IPR001804; KEGG: cbl:CLK_3621 isocitrate/isopropylmalate family dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; SPTR: Isocitrate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; isocitrate/isopropylmalate dehydrogenase 1137203..1138282 Isosphaera pallida ATCC 43644 10154919 YP_004177952.1 CDS Isop_0812 NC_014962.1 1138279 1138836 D COGs: COG0590 Cytosine/adenosine deaminase; InterPro IPR002125: IPR016192; KEGG: psl:Psta_0541 CMP/dCMP deaminase zinc-binding protein; PFAM: CMP/dCMP deaminase zinc-binding; SPTR: CMP/dCMP deaminase zinc-binding protein; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; tRNA-adenosine deaminase 1138279..1138836 Isosphaera pallida ATCC 43644 10154920 YP_004177953.1 CDS Isop_0814 NC_014962.1 1139651 1140340 R COGs: COG0637 phosphatase/phosphohexomutase; InterPro IPR005834: IPR006402; KEGG: mxa:MXAN_2697 HAD family hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; HAD-superfamily hydrolase complement(1139651..1140340) Isosphaera pallida ATCC 43644 10154923 YP_004177954.1 CDS Isop_0815 NC_014962.1 1140463 1141743 R COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR000192: IPR016454; KEGG: cre:CHLREDRAFT_191269 cysteine desulfurase; PFAM: aminotransferase class V; PRIAM: Cysteine desulfurase; SPTR: Cysteine desulfurase; PFAM: Aminotransferase class-V; cysteine desulfurase IscS complement(1140463..1141743) Isosphaera pallida ATCC 43644 10154924 YP_004177955.1 CDS Isop_0816 NC_014962.1 1142138 1142887 D KEGG: psl:Psta_3746 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1142138..1142887 Isosphaera pallida ATCC 43644 10154925 YP_004177956.1 CDS Isop_0817 NC_014962.1 1143141 1145690 D InterPro IPR003343: IPR011444; KEGG: psl:Psta_3533 protein of unknown function DUF1549; PFAM: protein of unknown function DUF1549; Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial Ig-like domain (group 2); Protein of unknown function (DUF1549); Protein of unknown function (DUF1553); hypothetical protein 1143141..1145690 Isosphaera pallida ATCC 43644 10154926 YP_004177957.1 CDS Isop_0818 NC_014962.1 1145952 1147301 D COGs: COG4102 conserved hypothetical protein; InterPro IPR010869: IPR017909; KEGG: psl:Psta_2015 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501); hypothetical protein 1145952..1147301 Isosphaera pallida ATCC 43644 10154927 YP_004177958.1 CDS Isop_0819 NC_014962.1 1147439 1148224 D COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: sus:Acid_3710 xylose isomerase domain-containing protein; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: Xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase-like TIM barrel; xylose isomerase domain-containing protein 1147439..1148224 Isosphaera pallida ATCC 43644 10154928 YP_004177959.1 CDS Isop_0820 NC_014962.1 1148444 1149244 D COGs: COG2230 Cyclopropane fatty acid synthase and related methyltransferase; InterPro IPR013216; KEGG: nve:NEMVE_v1g164983 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: Predicted protein; PFAM: Methyltransferase domain; type 11 methyltransferase 1148444..1149244 Isosphaera pallida ATCC 43644 10154929 YP_004177960.1 CDS Isop_0821 NC_014962.1 1149325 1152216 D KEGG: cai:Caci_3165 ricin B lectin; SPTR: Putative uncharacterized protein; hypothetical protein 1149325..1152216 Isosphaera pallida ATCC 43644 10154930 YP_004177961.1 CDS Isop_0822 NC_014962.1 1152330 1152581 D KEGG: ptm:GSPATT00000501001 hypothetical protein; SPTR: Chromosome undetermined scaffold_1, whole genome shotgun sequence; hypothetical protein 1152330..1152581 Isosphaera pallida ATCC 43644 10154931 YP_004177962.1 CDS Isop_0823 NC_014962.1 1152556 1154385 R COGs: COG0344 membrane protein; InterPro IPR003811: IPR020788; KEGG: plm:Plim_0829 protein of unknown function DUF205; PFAM: protein of unknown function DUF205; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF205); TIGRFAM: acyl-phosphate glycerol 3-phosphate acyltransferase; hypothetical protein complement(1152556..1154385) Isosphaera pallida ATCC 43644 10154932 YP_004177963.1 CDS Isop_0824 NC_014962.1 1154396 1155277 R COGs: COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); InterPro IPR005835; KEGG: rrs:RoseRS_4077 nucleotidyl transferase; PFAM: Nucleotidyl transferase; SPTR: Nucleotidyl transferase; PFAM: Nucleotidyl transferase; nucleotidyltransferase complement(1154396..1155277) Isosphaera pallida ATCC 43644 10154933 YP_004177964.1 CDS Isop_0825 NC_014962.1 1155274 1156563 R COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sfu:Sfum_0373 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Probable glycosyltransferase; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase complement(1155274..1156563) Isosphaera pallida ATCC 43644 10154934 YP_004177965.1 CDS Isop_0826 NC_014962.1 1156586 1157494 R KEGG: pca:Pcar_1265 putative LPS biosynthesis enzyme; SPTR: Mn2+-dependent serine/threonine protein kinase; PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family; hypothetical protein complement(1156586..1157494) Isosphaera pallida ATCC 43644 10154935 YP_004177966.1 CDS Isop_0827 NC_014962.1 1157470 1159107 R KEGG: tcx:Tcr_2091 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1157470..1159107) Isosphaera pallida ATCC 43644 10154936 YP_004177967.1 CDS Isop_0828 NC_014962.1 1159338 1159949 D COGs: COG0279 Phosphoheptose isomerase; InterPro IPR001347; KEGG: plm:Plim_1528 sugar isomerase (SIS); PFAM: sugar isomerase (SIS); SPTR: Sugar isomerase (SIS); PFAM: SIS domain; sugar isomerase 1159338..1159949 Isosphaera pallida ATCC 43644 10154937 YP_004177968.1 CDS Isop_0829 NC_014962.1 1159974 1161020 D COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: plm:Plim_1388 ROK family protein; PFAM: ROK family protein; SPTR: ROK protein; PFAM: ROK family; ROK family protein 1159974..1161020 Isosphaera pallida ATCC 43644 10154938 YP_004177969.1 CDS Isop_0830 NC_014962.1 1161128 1165798 R InterPro IPR018062; KEGG: syf:Synpcc7942_0287 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1161128..1165798) Isosphaera pallida ATCC 43644 10154939 YP_004177970.1 CDS Isop_0831 NC_014962.1 1166125 1166775 D COGs: COG0613 metal-dependent phosphoesterase (PHP family); InterPro IPR004013: IPR003141; KEGG: cbf:CLI_3812 phosphotransferase domain-containing protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; SPTR: PHP domain protein; manually curated; PFAM: PHP domain; PHP domain-containing protein 1166125..1166775 Isosphaera pallida ATCC 43644 10154940 YP_004177971.1 CDS Isop_0832 NC_014962.1 1166797 1168122 R COGs: COG0705 membrane protein; InterPro IPR002610; KEGG: bse:Bsel_2310 rhomboid protease; PFAM: Rhomboid family protein; SPTR: Rhomboid protease; PFAM: Rhomboid family; rhomboid family protein complement(1166797..1168122) Isosphaera pallida ATCC 43644 10154941 YP_004177972.1 CDS Isop_0833 NC_014962.1 1168119 1168754 R COGs: COG4293 conserved hypothetical protein; InterPro IPR014923; KEGG: dra:DR_0097 hypothetical protein; PFAM: protein of unknown function DUF1802; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1802); hypothetical protein complement(1168119..1168754) Isosphaera pallida ATCC 43644 10154942 YP_004177973.1 CDS Isop_0834 NC_014962.1 1168802 1169833 R COGs: COG0240 Glycerol-3-phosphate dehydrogenase; InterPro IPR006168: IPR011128: IPR006109; KEGG: plm:Plim_1353 glycerol-3-phosphate dehydrogenase (NAD(P)(+)); PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; SPTR: Glycerol-3-phosphate dehydrogenase; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein complement(1168802..1169833) Isosphaera pallida ATCC 43644 10154943 YP_004177974.1 CDS Isop_0835 NC_014962.1 1170130 1171890 D COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; KEGG: hau:Haur_0806 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase; hypothetical protein 1170130..1171890 Isosphaera pallida ATCC 43644 10154944 YP_004177975.1 CDS Isop_0836 NC_014962.1 1172266 1174011 R COGs: COG2046 ATP sulfurylase (sulfate adenylyltransferase); InterPro IPR002891: IPR002650; KEGG: cag:Cagg_1550 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; PFAM: ATP-sulfurylase; adenylylsulfate kinase; PRIAM: Sulfate adenylyltransferase., Adenylyl-sulfate kinase; SPTR: Sulfate adenylyltransferase; TIGRFAM: sulfate adenylyltransferase; adenylylsulfate kinase; PFAM: ATP-sulfurylase; Adenylylsulphate kinase; TIGRFAM: adenylylsulfate kinase (apsK); ATP sulphurylase; sulfate adenylyltransferase complement(1172266..1174011) Isosphaera pallida ATCC 43644 10154945 YP_004177976.1 CDS Isop_0837 NC_014962.1 1174215 1174628 R COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: psl:Psta_0335 transcriptional regulator, BadM/Rrf2 family; PFAM: protein of unknown function UPF0074; SPTR: Transcriptional regulator, BadM/Rrf2 family; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: Transcriptional regulator; TIGRFAM: rrf2 family protein (putative transcriptional regulator); BadM/Rrf2 family transcriptional regulator complement(1174215..1174628) Isosphaera pallida ATCC 43644 10154946 YP_004177977.1 CDS Isop_0838 NC_014962.1 1174729 1175541 R COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; InterPro IPR002500: IPR004511; KEGG: psl:Psta_0334 phosphoadenosine phosphosulfate reductase; PFAM: phosphoadenosine phosphosulfate reductase; PRIAM: Phosphoadenylyl-sulfate reductase (thioredoxin); SPTR: Phosphoadenosine phosphosulfate reductase; TIGRFAM: phosphoadenosine phosphosulfate reductase; PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: phosophoadenylyl-sulfate reductase (thioredoxin); phosphoadenylylsulfate reductase complement(1174729..1175541) Isosphaera pallida ATCC 43644 10154947 YP_004177978.1 CDS Isop_0839 NC_014962.1 1176111 1177208 D COGs: COG0642 Signal transduction histidine kinase; InterPro IPR004358: IPR003661: IPR003594: IPR005467; KEGG: psl:Psta_2875 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: Histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; histidine kinase 1176111..1177208 Isosphaera pallida ATCC 43644 10154948 YP_004177979.1 CDS Isop_0840 NC_014962.1 1177412 1180096 D COGs: COG1048 Aconitase A; InterPro IPR001030: IPR000573: IPR006249: IPR018136; KEGG: chl:Chy400_3402 aconitate hydratase 1; PFAM: aconitate hydratase domain-containing protein; SPTR: Aconitate hydratase 1; TIGRFAM: aconitate hydratase 1; PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase 1; aconitase 1177412..1180096 Isosphaera pallida ATCC 43644 10154949 YP_004177980.1 CDS Isop_0841 NC_014962.1 1180347 1181951 D COGs: COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type alpha subunit; InterPro IPR001017: IPR017597; KEGG: phe:Phep_0171 pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; PFAM: dehydrogenase E1 component; PRIAM: Pyruvate dehydrogenase (acetyl-transferring); SPTR: Pyruvate dehydrogenase; TIGRFAM: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit; PFAM: Dehydrogenase E1 component; TIGRFAM: pyruvate dehydrogenase E1 component, alpha subunit; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha 1180347..1181951 Isosphaera pallida ATCC 43644 10154950 YP_004177981.1 CDS Isop_0842 NC_014962.1 1182126 1183103 D COGs: COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit; InterPro IPR005475: IPR005476; KEGG: scl:sce3801 pyruvate dehydrogenase (acetyl-transferring); PFAM: Transketolase central region; Transketolase domain-containing protein; SPTR: Pyruvate dehydrogenase (Acetyl-transferring); PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; transketolase central region 1182126..1183103 Isosphaera pallida ATCC 43644 10154951 YP_004177982.1 CDS Isop_0843 NC_014962.1 1183430 1184779 D COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterPro IPR000089: IPR004167: IPR001078: IPR003016; KEGG: ace:Acel_0588 dehydrogenase catalytic domain-containing protein; PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; SPTR: Catalytic domain of components of various dehydrogenase complexes; PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form; hypothetical protein 1183430..1184779 Isosphaera pallida ATCC 43644 10154952 YP_004177983.1 CDS Isop_0844 NC_014962.1 1184989 1186884 D InterPro IPR001901; KEGG: plm:Plim_0565 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1184989..1186884 Isosphaera pallida ATCC 43644 10154953 YP_004177984.1 CDS Isop_0845 NC_014962.1 1187157 1190240 D KEGG: plm:Plim_2152 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1187157..1190240 Isosphaera pallida ATCC 43644 10154954 YP_004177985.1 CDS Isop_0846 NC_014962.1 1190497 1191648 D KEGG: spu:576647 receptor for egg jelly protein; SPTR: Receptor for egg jelly protein 9; hypothetical protein 1190497..1191648 Isosphaera pallida ATCC 43644 10154955 YP_004177986.1 CDS Isop_0847 NC_014962.1 1191852 1192169 R COGs: COG2501 conserved hypothetical protein; InterPro IPR002942; KEGG: vfm:VFMJ11_A0298 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1191852..1192169) Isosphaera pallida ATCC 43644 10154956 YP_004177987.1 CDS Isop_0848 NC_014962.1 1192166 1192882 R InterPro IPR003825; KEGG: plm:Plim_1277 colicin V production protein; PFAM: Colicin V production protein; SPTR: Colicin V production protein; PFAM: Colicin V production protein; colicin V production protein complement(1192166..1192882) Isosphaera pallida ATCC 43644 10154957 YP_004177988.1 CDS Isop_0849 NC_014962.1 1193076 1194134 R KEGG: psl:Psta_2453 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1193076..1194134) Isosphaera pallida ATCC 43644 10154958 YP_004177989.1 CDS Isop_0850 NC_014962.1 1194847 1195116 D KEGG: plm:Plim_2412 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1194847..1195116 Isosphaera pallida ATCC 43644 10154959 YP_004177990.1 CDS Isop_0851 NC_014962.1 1195296 1195670 D InterPro IPR002645: IPR003658; KEGG: plm:Plim_0153 anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: Putative uncharacterized protein; TIGRFAM: anti-anti-sigma factor; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; anti-anti-sigma factor 1195296..1195670 Isosphaera pallida ATCC 43644 10154960 YP_004177991.1 CDS Isop_0852 NC_014962.1 1195667 1196887 D COGs: COG0705 membrane protein; InterPro IPR002610; KEGG: mmh:Mmah_1165 rhomboid family protein; PFAM: Rhomboid family protein; SPTR: Cytoplasmic membrane protein; PFAM: Rhomboid family; rhomboid family protein 1195667..1196887 Isosphaera pallida ATCC 43644 10154961 YP_004177992.1 CDS Isop_0853 NC_014962.1 1196884 1197411 D InterPro IPR000182; KEGG: srm:SRM_03016 acetyltransferase, GNAT family; PFAM: GCN5-related N-acetyltransferase; SPTR: Acetyltransferase, GNAT family; PFAM: Acetyltransferase (GNAT) family; N-acetyltransferase GCN5 1196884..1197411 Isosphaera pallida ATCC 43644 10154962 YP_004177993.1 CDS Isop_0854 NC_014962.1 1197438 1198115 R KEGG: pti:PHATRDRAFT_43752 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1197438..1198115) Isosphaera pallida ATCC 43644 10154963 YP_004177994.1 CDS Isop_0855 NC_014962.1 1198257 1198841 D KEGG: cwo:Cwoe_4269 FAD dependent oxidoreductase; SPTR: FAD dependent oxidoreductase; hypothetical protein 1198257..1198841 Isosphaera pallida ATCC 43644 10154964 YP_004177995.1 CDS Isop_0856 NC_014962.1 1198948 1199304 R KEGG: cpc:Cpar_0045 F0F1 ATP synthase subunit beta; SPTR: Putative uncharacterized protein; hypothetical protein complement(1198948..1199304) Isosphaera pallida ATCC 43644 10154965 YP_004177996.1 CDS Isop_0857 NC_014962.1 1199482 1200342 R InterPro IPR006186: IPR004843; KEGG: plm:Plim_0868 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase; metallophosphoesterase complement(1199482..1200342) Isosphaera pallida ATCC 43644 10154966 YP_004177997.1 CDS Isop_0858 NC_014962.1 1200882 1201412 D COGs: COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase; InterPro IPR013114; KEGG: plm:Plim_3297 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; SPTR: Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabA/FabZ; PFAM: FabA-like domain; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ 1200882..1201412 Isosphaera pallida ATCC 43644 10154967 YP_004177998.1 CDS Isop_0859 NC_014962.1 1201564 1202349 D COGs: COG0220 S-adenosylmethionine-dependent methyltransferase; InterPro IPR003358; KEGG: plm:Plim_3296 tRNA (guanine-N(7)-)-methyltransferase; PFAM: methyltransferase; SPTR: Putative uncharacterized protein; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: Putative methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 1201564..1202349 Isosphaera pallida ATCC 43644 10154968 YP_004177999.1 CDS Isop_0860 NC_014962.1 1202325 1205189 R KEGG: psl:Psta_1696 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1202325..1205189) Isosphaera pallida ATCC 43644 10154969 YP_004178000.1 CDS Isop_0861 NC_014962.1 1205352 1206896 R COGs: COG2319 FOG: WD40 repeat; InterProIPR020472: IPR019781: IPR001680: IPR019782: IPR 017986: IPR019775; KEGG: psl:Psta_3242 WD-40 repeat protein; PFAM: WD40 repeat, subgroup; SMART: WD-40 repeat-containing protein; SPTR: WD-40 repeat protein; PFAM: WD domain, G-beta repeat; Planctomycete cytochrome C; WD40 repeat-containing protein complement(1205352..1206896) Isosphaera pallida ATCC 43644 10154970 YP_004178001.1 CDS Isop_0862 NC_014962.1 1206893 1209280 R KEGG: psl:Psta_4371 hypothetical protein; SPTR: Probable serine proteinase, subtilase family protein; hypothetical protein complement(1206893..1209280) Isosphaera pallida ATCC 43644 10154971 YP_004178002.1 CDS Isop_0863 NC_014962.1 1209718 1210284 D InterPro IPR004238; KEGG: mgr:MGG_06862 hypothetical protein; PFAM: Late embryogenesis abundant protein; SPTR: Putative uncharacterized protein; PFAM: Late embryogenesis abundant protein; Late embryogenesis abundant protein 1209718..1210284 Isosphaera pallida ATCC 43644 10154972 YP_004178003.1 CDS Isop_0864 NC_014962.1 1210485 1211477 R KEGG: gtn:GTNG_0567 ABC transporter (permease) EscB; SPTR: ABC transporter (Permease) EscB; hypothetical protein complement(1210485..1211477) Isosphaera pallida ATCC 43644 10154973 YP_004178004.1 CDS Isop_0865 NC_014962.1 1211658 1213493 R COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; KEGG: srm:SRM_00402 cytochrome c oxidase subunit 1; SPTR: Putative cytochrome-c oxidase; PFAM: Cytochrome C and Quinol oxidase polypeptide I; hypothetical protein complement(1211658..1213493) Isosphaera pallida ATCC 43644 10154974 YP_004178005.1 CDS Isop_0866 NC_014962.1 1213774 1215579 R InterPro IPR009056; KEGG: psl:Psta_2931 cytochrome c class I; SPTR: Probable PbrT protein-possibly cytochrome c; PFAM: Cytochrome c; hypothetical protein complement(1213774..1215579) Isosphaera pallida ATCC 43644 10154975 YP_004178006.1 CDS Isop_0867 NC_014962.1 1216105 1218318 D InterPro IPR003088: IPR009056; KEGG: psl:Psta_2931 cytochrome c class I; PFAM: cytochrome c class I; SPTR: Cytochrome c class I; PFAM: Cytochrome c; class I cytochrome c 1216105..1218318 Isosphaera pallida ATCC 43644 10154976 YP_004178007.1 CDS Isop_0868 NC_014962.1 1218722 1219648 D COGs: COG1622 Heme/copper-type cytochrome/quinol oxidase subunit 2; InterPro IPR002429: IPR011759: IPR014222: IPR001505; KEGG: psl:Psta_2930 cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome C oxidase subunit II transmembrane region; SPTR: Cytochrome c oxidase subunit 2; TIGRFAM: cytochrome c oxidase, subunit II; PFAM: Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome C oxidase subunit II, transmembrane domain; TIGRFAM: cytochrome c oxidase, subunit II; cytochrome c oxidase subunit II 1218722..1219648 Isosphaera pallida ATCC 43644 10154977 YP_004178008.1 CDS Isop_0869 NC_014962.1 1219645 1221525 D COGs: COG0843 Heme/copper-type cytochrome/quinol oxidase subunit 1; InterPro IPR000883; KEGG: psl:Psta_2929 cytochrome-c oxidase; PFAM: cytochrome c oxidase subunit I; SPTR: Cytochrome c oxidase subunit I; PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, subunit I; cytochrome c oxidase subunit I 1219645..1221525 Isosphaera pallida ATCC 43644 10154978 YP_004178009.1 CDS Isop_0870 NC_014962.1 1221576 1222895 D COGs: COG1612 Uncharacterized protein required for cytochrome oxidase assembly; KEGG: rba:RB11934 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Cytochrome oxidase assembly protein; hypothetical protein 1221576..1222895 Isosphaera pallida ATCC 43644 10154979 YP_004178010.1 CDS Isop_0871 NC_014962.1 1222892 1223944 D COGs: COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor); InterPro IPR006369: IPR000537; KEGG: plm:Plim_2955 protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; SPTR: Protoheme IX farnesyltransferase; TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase family; TIGRFAM: protoheme IX farnesyltransferase; protoheme IX farnesyltransferase 1222892..1223944 Isosphaera pallida ATCC 43644 10154980 YP_004178011.1 CDS Isop_0872 NC_014962.1 1224054 1224818 D COGs: COG1845 Heme/copper-type cytochrome/quinol oxidase subunit 3; InterPro IPR000298: IPR020606; KEGG: hwa:HQ2352A cytochrome-C-like terminal oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; PRIAM: Cytochrome-c oxidase; SPTR: Cytochrome-c-like terminal oxidase, subunit III; PFAM: Cytochrome c oxidase subunit III; cytochrome-c oxidase 1224054..1224818 Isosphaera pallida ATCC 43644 10154981 YP_004178012.1 CDS Isop_0873 NC_014962.1 1224984 1226411 D COGs: COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; InterPro IPR005814: IPR005815; KEGG: dvu:DVU2559 adenosylmethionine--8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; SPTR: Adenosylmethionine--8-amino-7-oxononanoate aminotransferase; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: Aminotransferase class-III; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate transaminase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 1224984..1226411 Isosphaera pallida ATCC 43644 10154982 YP_004178013.1 CDS Isop_0874 NC_014962.1 1226408 1227175 D COGs: COG0132 Dethiobiotin synthetase; InterPro IPR004472; KEGG: hoh:Hoch_6892 dethiobiotin synthase; SPTR: Dethiobiotin synthetase; TIGRFAM: dethiobiotin synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: dethiobiotin synthase; dethiobiotin synthase 1226408..1227175 Isosphaera pallida ATCC 43644 10154983 YP_004178014.1 CDS Isop_0875 NC_014962.1 1227494 1228666 D KEGG: lbz:LbrM34_V2.0530 proteophosphoglycan ppg4; SPTR: Proteophosphoglycan ppg4; hypothetical protein 1227494..1228666 Isosphaera pallida ATCC 43644 10154984 YP_004178015.1 CDS Isop_0876 NC_014962.1 1229050 1232469 D KEGG: rde:RD1_1585 VBCS repeat-containing protein; SPTR: VCBS repeat domain protein; VBCS repeat-containing protein 1229050..1232469 Isosphaera pallida ATCC 43644 10154985 YP_004178016.1 CDS Isop_0877 NC_014962.1 1232625 1233326 D InterPro IPR013424; KEGG: sml:Smlt1009 putative glycine-rich autotransporter protein; SPTR: Putative glycine-rich autotransporter protein; hypothetical protein 1232625..1233326 Isosphaera pallida ATCC 43644 10154986 YP_004178017.1 CDS Isop_0878 NC_014962.1 1233547 1234776 D InterPro IPR017481; KEGG: nca:Noca_3554 TPR repeat-containing protein; SPTR: TPR repeat; TIGRFAM: conserved hypothetical protein TIGR03032; hypothetical protein 1233547..1234776 Isosphaera pallida ATCC 43644 10154987 YP_004178018.1 CDS Isop_0879 NC_014962.1 1234773 1236893 D COGs: COG3914 O-linked N-acetylglucosamine transferase SPINDLY family; InterPro IPR001440: IPR019734: IPR013026; KEGG: ote:Oter_3958 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: TPR repeat-containing protein; PFAM: Tetratricopeptide repeat; hypothetical protein 1234773..1236893 Isosphaera pallida ATCC 43644 10154988 YP_004178019.1 CDS Isop_0880 NC_014962.1 1236984 1238414 R COGs: COG0422 Thiamine biosynthesis protein ThiC; InterPro IPR002817; KEGG: psl:Psta_1377 thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; SPTR: Phosphomethylpyrimidine synthase; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC; hydroxymethylpyrimidine synthase complement(1236984..1238414) Isosphaera pallida ATCC 43644 10154989 YP_004178020.1 CDS Isop_0881 NC_014962.1 1239025 1240632 R COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: aca:ACP_0275 MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; SPTR: MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; MATE efflux family protein complement(1239025..1240632) Isosphaera pallida ATCC 43644 10154990 YP_004178021.1 CDS Isop_0882 NC_014962.1 1240939 1241871 R COGs: COG1377 Flagellar biosynthesis pathway component FlhB; KEGG: aac:Aaci_1409 flagellar biosynthetic protein FlhB; SPTR: Flagellar biosynthetic protein FlhB; PFAM: FlhB HrpN YscU SpaS Family; hypothetical protein complement(1240939..1241871) Isosphaera pallida ATCC 43644 10154991 YP_004178022.1 CDS Isop_0883 NC_014962.1 1241971 1242903 R COGs: COG0682 Prolipoprotein diacylglyceryltransferase; InterPro IPR001640; KEGG: plm:Plim_2253 prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase; SPTR: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase complement(1241971..1242903) Isosphaera pallida ATCC 43644 10154992 YP_004178023.1 CDS Isop_0884 NC_014962.1 1242922 1243350 R COGs: COG0853 Aspartate 1-decarboxylase; InterPro IPR003190; KEGG: adg:Adeg_1875 aspartate 1-decarboxylase; PFAM: aspartate decarboxylase; PRIAM: Aspartate 1-decarboxylase; SPTR: Aspartate 1-decarboxylase; TIGRFAM: aspartate 1-decarboxylase; PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase; L-aspartate 1-decarboxylase complement(1242922..1243350) Isosphaera pallida ATCC 43644 10154993 YP_004178024.1 CDS Isop_0885 NC_014962.1 1243356 1244288 R COGs: COG0414 Panthothenate synthetase; InterPro IPR003721; KEGG: adg:Adeg_1876 pantoate/beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase; SPTR: Pantoate/beta-alanine ligase; TIGRFAM: pantoate/beta-alanine ligase; manually curated; PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase; pantothenate synthetase complement(1243356..1244288) Isosphaera pallida ATCC 43644 10154994 YP_004178025.1 CDS Isop_0886 NC_014962.1 1244434 1244823 R COGs: COG3411 Ferredoxin; InterPro IPR009737; KEGG: psl:Psta_4693 ferredoxin-like protein; PFAM: Sucraseferredoxin family protein; SPTR: Ferredoxin, 2Fe-2S; PFAM: Sucrase/ferredoxin-like; sucraseferredoxin family protein complement(1244434..1244823) Isosphaera pallida ATCC 43644 10154995 YP_004178026.1 CDS Isop_0887 NC_014962.1 1245019 1250076 R InterPro IPR018392: IPR002482; KEGG: dpo:Dpse_GA28568 GA28568 gene product from transcript GA28568-RA; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: GA28568; PFAM: LysM domain; peptidoglycan-binding lysin domain-containing protein complement(1245019..1250076) Isosphaera pallida ATCC 43644 10154996 YP_004178027.1 CDS Isop_0888 NC_014962.1 1250073 1251002 R COGs: COG0275 S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; InterPro IPR002903; KEGG: psl:Psta_2958 S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; SPTR: Ribosomal RNA small subunit methyltransferase H; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW complement(1250073..1251002) Isosphaera pallida ATCC 43644 10154997 YP_004178028.1 CDS Isop_0889 NC_014962.1 1251194 1251406 D SPTR: Hemolysin III family channel protein; hypothetical protein 1251194..1251406 Isosphaera pallida ATCC 43644 10154998 YP_004178029.1 CDS Isop_0890 NC_014962.1 1251489 1252367 D COGs: COG3828 conserved hypothetical protein; InterPro IPR006311: IPR017909; KEGG: ote:Oter_2820 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Trehalose utilisation; hypothetical protein 1251489..1252367 Isosphaera pallida ATCC 43644 10154999 YP_004178030.1 CDS Isop_0891 NC_014962.1 1252761 1253873 D COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: aba:Acid345_0284 ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter, ATPase subunit; PFAM: ABC transporter; ABC transporter-like protein 1252761..1253873 Isosphaera pallida ATCC 43644 10155000 YP_004178031.1 CDS Isop_0892 NC_014962.1 1253984 1255183 D COGs: COG0842 ABC-type multidrug transport system permease component; InterPro IPR013525: IPR000412; KEGG: aba:Acid345_0285 ABC multidrug efflux pump, inner membrane subunit; PFAM: ABC-2 type transporter; SPTR: ABC multidrug efflux pump, inner membrane subunit; PFAM: ABC-2 type transporter; ABC-2 type transporter 1253984..1255183 Isosphaera pallida ATCC 43644 10155001 YP_004178032.1 CDS Isop_0893 NC_014962.1 1255427 1256713 D KEGG: dmo:Dmoj_GI11778 GI11778 gene product from transcript GI11778-RA; SPTR: Flagelliform silk protein; hypothetical protein 1255427..1256713 Isosphaera pallida ATCC 43644 10155002 YP_004178033.1 CDS Isop_0894 NC_014962.1 1256905 1257027 D hypothetical protein 1256905..1257027 Isosphaera pallida ATCC 43644 10155003 YP_004178034.1 CDS Isop_0895 NC_014962.1 1257179 1257916 D InterPro IPR007055; KEGG: rba:RB8487 signal peptide; PFAM: transport-associated; SPTR: Putative uncharacterized protein; PFAM: Putative phospholipid-binding domain; transport-associated protein 1257179..1257916 Isosphaera pallida ATCC 43644 10155004 YP_004178035.1 CDS Isop_0896 NC_014962.1 1258136 1259614 R InterPro IPR000073: IPR002471; KEGG: mma:MM_3198 hypothetical protein; PFAM: alpha/beta hydrolase fold; SPTR: Putative uncharacterized protein; PFAM: X-Pro dipeptidyl-peptidase (S15 family); alpha/beta hydrolase fold protein complement(1258136..1259614) Isosphaera pallida ATCC 43644 10155005 YP_004178036.1 CDS Isop_0897 NC_014962.1 1259745 1261166 R COGs: COG0515 Serine/threonine protein kinase; InterProIPR017442: IPR020635: IPR002290: IPR000719: IPR 017441: IPR008271; KEGG: tte:TTE1500 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Protein tyrosine kinase family; PFAM: Protein kinase domain; serine/threonine protein kinase complement(1259745..1261166) Isosphaera pallida ATCC 43644 10155006 YP_004178037.1 CDS Isop_0899 NC_014962.1 1262208 1265468 R InterPro IPR018580; KEGG: psl:Psta_4419 hypothetical protein; PFAM: Protein of unknown function, membrane YfhO; SPTR: Putative uncharacterized protein; PFAM: Bacterial membrane protein YfhO; hypothetical protein complement(1262208..1265468) Isosphaera pallida ATCC 43644 10155008 YP_004178038.1 CDS Isop_0900 NC_014962.1 1265671 1267089 R COGs: COG1858 Cytochrome c peroxidase; InterPro IPR004852: IPR009056: IPR011031; KEGG: psl:Psta_3944 cytochrome-c peroxidase; PFAM: Di-haem cytochrome c peroxidase; PRIAM: Cytochrome-c peroxidase; SPTR: Cytochrome-c peroxidase; PFAM: Di-haem cytochrome c peroxidase; cytochrome-c peroxidase complement(1265671..1267089) Isosphaera pallida ATCC 43644 10155009 YP_004178039.1 CDS Isop_0901 NC_014962.1 1267488 1269635 D COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000253: IPR000160: IPR012307; KEGG: sus:Acid_4909 xylose isomerase domain-containing protein; PFAM: GGDEF domain containing protein; Forkhead-associated protein; Xylose isomerase domain-containing protein TIM barrel; SMART: GGDEF domain containing protein; Forkhead-associated protein; SPTR: Xylose isomerase domain protein TIM barrel; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; Xylose isomerase-like TIM barrel; FHA domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 1267488..1269635 Isosphaera pallida ATCC 43644 10155010 YP_004178040.1 CDS Isop_0902 NC_014962.1 1270023 1270415 R InterPro IPR001845; KEGG: plm:Plim_2033 regulatory protein ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Regulatory protein ArsR; PFAM: Bacterial regulatory protein, arsR family; regulatory protein ArsR complement(1270023..1270415) Isosphaera pallida ATCC 43644 10155011 YP_004178041.1 CDS Isop_0903 NC_014962.1 1271100 1272056 D COGs: COG3253 conserved hypothetical protein; InterPro IPR010644; KEGG: psl:Psta_0500 chlorite dismutase; PFAM: Chlorite dismutase; SPTR: Putative uncharacterized protein; PFAM: Chlorite dismutase; chlorite dismutase 1271100..1272056 Isosphaera pallida ATCC 43644 10155012 YP_004178042.1 CDS Isop_0904 NC_014962.1 1272186 1272476 D InterPro IPR000089; KEGG: fre:Franean1_7269 dehydrogenase catalytic domain-containing protein; PFAM: biotin/lipoyl attachment domain-containing protein; SPTR: Probable hydrolase; PFAM: Biotin-requiring enzyme; biotin/lipoyl attachment domain-containing protein 1272186..1272476 Isosphaera pallida ATCC 43644 10155013 YP_004178043.1 CDS Isop_0905 NC_014962.1 1272550 1273176 D InterPro IPR020476: IPR000086: IPR020084; KEGG: hut:Huta_0878 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: NUDIX hydrolase; PFAM: NUDIX domain; NUDIX hydrolase 1272550..1273176 Isosphaera pallida ATCC 43644 10155014 YP_004178044.1 CDS Isop_0906 NC_014962.1 1273179 1273853 D COGs: COG0125 Thymidylate kinase; InterPro IPR018094: IPR000062: IPR005829: IPR018095; KEGG: psl:Psta_2097 thymidylate kinase; PFAM: thymidylate kinase; PRIAM: dTMP kinase; SPTR: Thymidylate kinase; TIGRFAM: thymidylate kinase; PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase; thymidylate kinase 1273179..1273853 Isosphaera pallida ATCC 43644 10155015 YP_004178045.1 CDS Isop_0907 NC_014962.1 1273825 1274871 D COGs: COG2812 DNA polymerase III gamma/tau subunits; InterPro IPR004622; KEGG: psl:Psta_2096 DNA polymerase III gamma/tau subunits-like protein; SPTR: DNA polymerase III, tau/gamma subunit; TIGRFAM: DNA polymerase III, delta prime subunit; TIGRFAM: DNA polymerase III, delta' subunit; DNA polymerase III subunit delta' 1273825..1274871 Isosphaera pallida ATCC 43644 10155016 YP_004178046.1 CDS Isop_0908 NC_014962.1 1275049 1276398 R KEGG: paa:Paes_2121 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1275049..1276398) Isosphaera pallida ATCC 43644 10155017 YP_004178047.1 CDS Isop_0909 NC_014962.1 1276602 1277792 R COGs: COG0082 Chorismate synthase; InterPro IPR000453: IPR020541; KEGG: psl:Psta_4767 chorismate synthase; PFAM: chorismate synthase; PRIAM: Chorismate synthase; SPTR: Chorismate synthase; TIGRFAM: chorismate synthase; PFAM: Chorismate synthase; TIGRFAM: chorismate synthase; chorismate synthase complement(1276602..1277792) Isosphaera pallida ATCC 43644 10155018 YP_004178048.1 CDS Isop_0910 NC_014962.1 1277907 1278818 R COGs: COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; InterPro IPR001636: IPR018236; KEGG: psl:Psta_4309 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; PRIAM: Phosphoribosylaminoimidazolesuccinocarboxamide synthase; SPTR: Phosphoribosylaminoimidazole-succinocarboxamide synthase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase complement(1277907..1278818) Isosphaera pallida ATCC 43644 10155019 YP_004178049.1 CDS Isop_0911 NC_014962.1 1279214 1281661 D COGs: COG0642 Signal transduction histidine kinase; InterProIPR003018: IPR003661: IPR003594: IPR001789: IPR 005467: IPR004358; KEGG: tcx:Tcr_2068 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; response regulator receiver; SPTR: Sensory transduction histidine kinase; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; GAF sensor hybrid histidine kinase 1279214..1281661 Isosphaera pallida ATCC 43644 10155020 YP_004178050.1 CDS Isop_0912 NC_014962.1 1281717 1283249 R InterPro IPR009056; KEGG: noc:Noc_1610 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1281717..1283249) Isosphaera pallida ATCC 43644 10155021 YP_004178051.1 CDS Isop_0913 NC_014962.1 1283623 1285503 D KEGG: dpo:Dpse_GA21277 GA21277 gene product from transcript GA21277-RA; SPTR: Putative uncharacterized protein; hypothetical protein 1283623..1285503 Isosphaera pallida ATCC 43644 10155022 YP_004178052.1 CDS Isop_0914 NC_014962.1 1285926 1286855 D COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: isc:IscW_ISCW012637 dtdp-glucose 4-6-dehydratase, putative; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Dtdp-glucose 4-6-dehydratase, putative; PFAM: NAD dependent epimerase/dehydratase family; NAD-dependent epimerase/dehydratase 1285926..1286855 Isosphaera pallida ATCC 43644 10155023 YP_004178053.1 CDS Isop_0915 NC_014962.1 1287074 1288042 D COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: mpl:Mpal_2127 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family; NAD-dependent epimerase/dehydratase 1287074..1288042 Isosphaera pallida ATCC 43644 10155024 YP_004178054.1 CDS Isop_0916 NC_014962.1 1288256 1289695 D COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sru:SRU_0620 putative colanic acid biosynthesis glycosyl transferase; PFAM: glycosyl transferase group 1; SPTR: Putative colanic acid biosynthesis glycosyl transferase; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase 1288256..1289695 Isosphaera pallida ATCC 43644 10155025 YP_004178055.1 CDS Isop_0917 NC_014962.1 1289884 1292901 D InterPro IPR011658: IPR009056: IPR011031: IPR017937; KEGG: psl:Psta_3883 PA14 domain protein; SMART: PA14 domain protein; SPTR: PA14 domain protein; PFAM: PA14 domain; PA14 domain-containing protein 1289884..1292901 Isosphaera pallida ATCC 43644 10155026 YP_004178056.1 CDS Isop_0918 NC_014962.1 1292939 1294417 D KEGG: plm:Plim_1580 large, multifunctional secreted protein; SPTR: Large, multifunctional secreted protein; large, multifunctional secreted protein 1292939..1294417 Isosphaera pallida ATCC 43644 10155027 YP_004178057.1 CDS Isop_0919 NC_014962.1 1294522 1295559 R KEGG: similar to SET domain containing 1A; SPTR: Putative uncharacterized protein; hypothetical protein complement(1294522..1295559) Isosphaera pallida ATCC 43644 10155028 YP_004178058.1 CDS Isop_0920 NC_014962.1 1295699 1298053 R KEGG: act:ACLA_011820 myosin type II heavy chain, putative; SPTR: Myosin type II heavy chain, putative; manually curated; hypothetical protein complement(1295699..1298053) Isosphaera pallida ATCC 43644 10155029 YP_004178059.1 CDS Isop_0921 NC_014962.1 1298271 1299287 R KEGG: nar:Saro_3560 dehydrogenase catalytic domain-containing protein; SPTR: Catalytic domain of components of various dehydrogenase complexes; hypothetical protein complement(1298271..1299287) Isosphaera pallida ATCC 43644 10155030 YP_004178060.1 CDS Isop_0922 NC_014962.1 1299461 1301461 R KEGG: scl:sce2655 two-component hybrid sensor and regulator; SPTR: Two-component hybrid sensor and regulator; hypothetical protein complement(1299461..1301461) Isosphaera pallida ATCC 43644 10155031 YP_004178061.1 CDS Isop_0923 NC_014962.1 1301786 1302919 R COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: cyb:CYB_1783 sugar transferase family protein; PFAM: sugar transferase; SPTR: Bacterial sugar transferase family protein; PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; sugar transferase complement(1301786..1302919) Isosphaera pallida ATCC 43644 10155032 YP_004178062.1 CDS Isop_0924 NC_014962.1 1303402 1304628 D COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: rxy:Rxyl_3119 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, family 2; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase 1303402..1304628 Isosphaera pallida ATCC 43644 10155033 YP_004178063.1 CDS Isop_0925 NC_014962.1 1304625 1306241 D KEGG: gem:GM21_3502 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1304625..1306241 Isosphaera pallida ATCC 43644 10155034 YP_004178064.1 CDS Isop_0926 NC_014962.1 1306273 1307478 R InterPro IPR008912; KEGG: psl:Psta_0364 VWA containing CoxE family protein; PFAM: VWA containing CoxE family protein; SPTR: VWA containing CoxE family protein; PFAM: VWA domain containing CoxE-like protein; VWA containing CoxE family protein complement(1306273..1307478) Isosphaera pallida ATCC 43644 10155035 YP_004178065.1 CDS Isop_0927 NC_014962.1 1307539 1309908 R InterPro IPR002092; KEGG: psl:Psta_0365 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1307539..1309908) Isosphaera pallida ATCC 43644 10155036 YP_004178066.1 CDS Isop_0928 NC_014962.1 1309905 1311080 R COGs: COG0714 MoxR-like ATPase; InterPro IPR011704; KEGG: psl:Psta_0366 ATPase associated with various cellular activities AAA_5; PFAM: ATPase associated with various cellular activities AAA_5; SPTR: ATPase associated with various cellular activities AAA_5; PFAM: AAA domain (dynein-related subfamily); ATPase complement(1309905..1311080) Isosphaera pallida ATCC 43644 10155037 YP_004178067.1 CDS Isop_0929 NC_014962.1 1311248 1313107 R KEGG: psl:Psta_0367 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1311248..1313107) Isosphaera pallida ATCC 43644 10155038 YP_004178068.1 CDS Isop_0930 NC_014962.1 1313190 1314641 R InterPro IPR007527; KEGG: psl:Psta_0368 zinc finger SWIM domain protein; SPTR: Zinc finger SWIM domain protein; zinc finger SWIM domain-containing protein complement(1313190..1314641) Isosphaera pallida ATCC 43644 10155039 YP_004178069.1 CDS Isop_0931 NC_014962.1 1314901 1315737 R COGs: COG0637 phosphatase/phosphohexomutase; InterPro IPR006323: IPR005834; KEGG: azl:AZL_a10480 phosphonoacetaldehyde hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: Phosphonoacetaldehyde hydrolase; TIGRFAM: phosphonoacetaldehyde hydrolase; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: phosphonoacetaldehyde hydrolase; phosphonoacetaldehyde hydrolase complement(1314901..1315737) Isosphaera pallida ATCC 43644 10155040 YP_004178070.1 CDS Isop_0932 NC_014962.1 1315792 1317084 R COGs: COG0075 Serine-pyruvate aminotransferase/ aspartate aminotransferase; InterPro IPR012703: IPR017688: IPR000192; KEGG: bfo:BRAFLDRAFT_77063 hypothetical protein; PFAM: aminotransferase class V; SPTR: Putative uncharacterized protein; TIGRFAM: 2-aminoethylphosphonate/pyruvate transaminase; 2-aminoethylphosphonate aminotransferase; PFAM: Aminotransferase class-V; TIGRFAM: 2-aminoethylphosphonate aminotransferase; 2-aminoethylphosphonate--pyruvate transaminase; 2-aminoethylphosphonate--pyruvate transaminase complement(1315792..1317084) Isosphaera pallida ATCC 43644 10155041 YP_004178071.1 CDS Isop_0933 NC_014962.1 1317647 1319437 D COGs: COG0028 Thiamine pyrophosphate-requiring protein; InterProIPR012846: IPR012001: IPR012000: IPR011766: IPR 000399; KEGG: psl:Psta_1779 acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; SPTR: Acetolactate synthase; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; acetolactate synthase large subunit 1317647..1319437 Isosphaera pallida ATCC 43644 10155042 YP_004178072.1 CDS Isop_0934 NC_014962.1 1319669 1320085 D InterPro IPR002321; KEGG: tmz:Tmz1t_1007 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Cytochrome C'; hypothetical protein 1319669..1320085 Isosphaera pallida ATCC 43644 10155043 YP_004178073.1 CDS Isop_0935 NC_014962.1 1320236 1320997 R COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284: IPR007627: IPR013249; KEGG: plm:Plim_0700 RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: RNA polymerase sigma factor sigW; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; ECF subfamily RNA polymerase sigma-24 factor complement(1320236..1320997) Isosphaera pallida ATCC 43644 10155044 YP_004178074.1 CDS Isop_0936 NC_014962.1 1321646 1322035 R KEGG: xtr:448447 paired box 6; SPTR: Pax6 variant; hypothetical protein complement(1321646..1322035) Isosphaera pallida ATCC 43644 10155045 YP_004178075.1 CDS Isop_0937 NC_014962.1 1322599 1325877 R KEGG: rba:RB4703 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1322599..1325877) Isosphaera pallida ATCC 43644 10155046 YP_004178076.1 CDS Isop_0938 NC_014962.1 1325879 1326124 D KEGG: mva:Mvan_3126 beta-ketoacyl synthase; SPTR: Beta-ketoacyl synthase; hypothetical protein 1325879..1326124 Isosphaera pallida ATCC 43644 10155047 YP_004178077.1 CDS Isop_0939 NC_014962.1 1326090 1327304 R COGs: COG0486 GTPase; InterPro IPR005225: IPR018948: IPR002917; KEGG: tra:Trad_1190 tRNA modification GTPase TrmE; PFAM: GTP-binding protein HSR1-related; GTP-binding protein TrmE-like; SPTR: TRNA modification GTPase TrmE; TIGRFAM: small GTP-binding protein; manually curated; PFAM: GTPase of unknown function; TIGRFAM: small GTP-binding protein domain; small GTP-binding protein complement(1326090..1327304) Isosphaera pallida ATCC 43644 10155048 YP_004178078.1 CDS Isop_0940 NC_014962.1 1327404 1328291 R KEGG: gvi:gvip179 dihydrobiliverdin:ferredoxin oxidoreductase; SPTR: Ferredoxin-dependent bilin reductase; PFAM: Ferredoxin-dependent bilin reductase; hypothetical protein complement(1327404..1328291) Isosphaera pallida ATCC 43644 10155049 YP_004178079.1 CDS Isop_0941 NC_014962.1 1328388 1329584 R COGs: COG1454 Alcohol dehydrogenase class IV; InterPro IPR001670: IPR017972; KEGG: reu:Reut_C6426 iron-containing alcohol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase; SPTR: Iron-containing alcohol dehydrogenase; PFAM: Iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase complement(1328388..1329584) Isosphaera pallida ATCC 43644 10155050 YP_004178080.1 CDS Isop_0942 NC_014962.1 1329578 1329895 R KEGG: rba:RB3171 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1329578..1329895) Isosphaera pallida ATCC 43644 10155051 YP_004178081.1 CDS Isop_0943 NC_014962.1 1330230 1331351 R COGs: COG3684 Tagatose-1 6-bisphosphate aldolase; InterPro IPR002915; KEGG: deb:DehaBAV1_1156 tagatose 1,6-diphosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; PRIAM: Tagatose-bisphosphate aldolase; SPTR: Tagatose-bisphosphate aldolase; PFAM: DeoC/LacD family aldolase; TIGRFAM: tagatose 1,6-diphosphate aldolase; Tagatose-bisphosphate aldolase complement(1330230..1331351) Isosphaera pallida ATCC 43644 10155052 YP_004178082.1 CDS Isop_0944 NC_014962.1 1332033 1335386 D COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014: IPR003661: IPR003594: IPR001789: IPR 005467: IPR000700: IPR013767: IPR004358; KEGG: rba:RB13181 sensory transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; response regulator receiver; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; SPTR: Sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; multi-sensor hybrid histidine kinase 1332033..1335386 Isosphaera pallida ATCC 43644 10155053 YP_004178083.1 CDS Isop_0945 NC_014962.1 1335630 1338140 R InterPro IPR013517; KEGG: plm:Plim_3628 FG-GAP repeat protein; PFAM: FG-GAP repeat protein; SPTR: Lipoprotein, putative; FG-GAP repeat-containing protein complement(1335630..1338140) Isosphaera pallida ATCC 43644 10155054 YP_004178084.1 CDS Isop_0946 NC_014962.1 1338600 1338755 R hypothetical protein complement(1338600..1338755) Isosphaera pallida ATCC 43644 10155055 YP_004178085.1 CDS Isop_0947 NC_014962.1 1338752 1340035 R COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR014030: IPR014031: IPR018201; KEGG: adg:Adeg_0960 3-oxoacyl-(acyl-carrier-protein) synthase 2; PFAM: Beta-ketoacyl synthase; SPTR: 3-oxoacyl-(Acyl-carrier-protein) synthase 2; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II; 3-oxoacyl-(acyl-carrier-protein) synthase II complement(1338752..1340035) Isosphaera pallida ATCC 43644 10155056 YP_004178086.1 CDS Isop_0948 NC_014962.1 1340845 1342314 D COGs: COG0621 2-methylthioadenine synthetase; InterProIPR006638: IPR002792: IPR013848: IPR005839: IPR 005840: IPR007197: IPR020612; KEGG: psl:Psta_3170 MiaB-like tRNA modifying enzyme YliG; PFAM: protein of unknown function UPF0004; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: MiaB-like tRNA modifying enzyme YliG; TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme YliG, TIGR01125; RNA modification enzyme, MiaB family; 30S ribosomal protein S12P methylthiotransferase 1340845..1342314 Isosphaera pallida ATCC 43644 10155057 YP_004178087.1 CDS Isop_0949 NC_014962.1 1342384 1343058 D COGs: COG0558 Phosphatidylglycerophosphate synthase; InterPro IPR004570: IPR000462; KEGG: psl:Psta_3169 CDP-diacylglycerol/glycerol-3-phosphate3- phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR:CDP-diacylglycerol/glycerol-3-phosphate3-phosp hatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 1342384..1343058 Isosphaera pallida ATCC 43644 10155058 YP_004178088.1 CDS Isop_0950 NC_014962.1 1343249 1344187 D COGs: COG1968 Uncharacterized bacitracin resistance protein; InterPro IPR003824; KEGG: chy:CHY_1158 undecaprenyl pyrophosphate phosphatase; PFAM: Bacitracin resistance protein BacA; SPTR: Undecaprenyl-diphosphatase; PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP; bacitracin resistance protein BacA 1343249..1344187 Isosphaera pallida ATCC 43644 10155059 YP_004178089.1 CDS Isop_0951 NC_014962.1 1344129 1347866 D COGs: COG3857 ATP-dependent nuclease subunit B; InterPro IPR014017; KEGG: plm:Plim_2361 ATP-dependent nuclease subunit B-like protein; SPTR: ATP-dependent deoxyribonuclease subunit B; hypothetical protein 1344129..1347866 Isosphaera pallida ATCC 43644 10155060 YP_004178090.1 CDS Isop_0952 NC_014962.1 1347863 1351507 D COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR014016: IPR014017: IPR000212; KEGG: plm:Plim_1377 exodeoxyribonuclease V; PFAM: UvrD/REP helicase; PRIAM: Exodeoxyribonuclease V; SPTR: UvrD/REP helicase; PFAM: UvrD/REP helicase; exodeoxyribonuclease V 1347863..1351507 Isosphaera pallida ATCC 43644 10155061 YP_004178091.1 CDS Isop_0953 NC_014962.1 1351540 1353366 R COGs: COG1404 Subtilisin-like serine protease; InterPro IPR000209; KEGG: rxy:Rxyl_1295 peptidase S8/S53 subtilisin kexin sedolisin; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: Cna protein B-type domain; PFAM: Subtilase family; peptidase S8 and S53 subtilisin kexin sedolisin complement(1351540..1353366) Isosphaera pallida ATCC 43644 10155062 YP_004178092.1 CDS Isop_0954 NC_014962.1 1353607 1354728 R COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase; InterPro IPR001804: IPR019818; KEGG: tbi:Tbis_2812 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; PRIAM: 3-isopropylmalate dehydrogenase; SPTR: 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase complement(1353607..1354728) Isosphaera pallida ATCC 43644 10155063 YP_004178093.1 CDS Isop_0955 NC_014962.1 1355364 1356491 D InterPro IPR012902: IPR001120; KEGG: plm:Plim_1302 protein of unknown function DUF1559; SPTR: Probable fimbrial protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 1355364..1356491 Isosphaera pallida ATCC 43644 10155064 YP_004178094.1 CDS Isop_0956 NC_014962.1 1356828 1357352 D KEGG: psl:Psta_3881 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1356828..1357352 Isosphaera pallida ATCC 43644 10155065 YP_004178095.1 CDS Isop_0957 NC_014962.1 1357627 1358814 D KEGG: sus:Acid_6147 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF362); hypothetical protein 1357627..1358814 Isosphaera pallida ATCC 43644 10155066 YP_004178096.1 CDS Isop_0958 NC_014962.1 1358890 1360197 D InterPro IPR019734: IPR013026; KEGG: sus:Acid_3324 TPR repeat-containing protein; SPTR: Tetratricopeptide TPR_2 repeat protein; hypothetical protein 1358890..1360197 Isosphaera pallida ATCC 43644 10155067 YP_004178097.1 CDS Isop_0959 NC_014962.1 1360262 1361170 R InterPro IPR013424: IPR011449; KEGG: gur:Gura_2610 filamentous haemagglutinin outer membrane protein; PFAM: protein of unknown function DUF1555; SPTR: ATPase with chaperone activity, ATP-binding subunit; hypothetical protein complement(1360262..1361170) Isosphaera pallida ATCC 43644 10155068 YP_004178098.1 CDS Isop_0960 NC_014962.1 1362096 1362509 R InterPro IPR013424; KEGG: ote:Oter_0535 hypothetical protein; SPTR: Hemolysin-type calcium-binding region; TIGRFAM: PEP-CTERM putative exosortase interaction domain; hypothetical protein complement(1362096..1362509) Isosphaera pallida ATCC 43644 10155069 YP_004178099.1 CDS Isop_0961 NC_014962.1 1363260 1363760 R KEGG: mch:Mchl_4671 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1363260..1363760) Isosphaera pallida ATCC 43644 10155070 YP_004178100.1 CDS Isop_0962 NC_014962.1 1363975 1366509 R COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR003593: IPR001943: IPR004176: IPR003959: IPR 013093: IPR019489: IPR001270: IPR018368; KEGG: plm:Plim_0603 ATPase AAA-2 domain protein; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; UvrB/UvrC protein; Clp ATPase-like; SMART: AAA ATPase; SPTR: ATPase AAA-2 domain protein; PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); UvrB/uvrC motif; ATPase AAA-2 domain-containing protein complement(1363975..1366509) Isosphaera pallida ATCC 43644 10155071 YP_004178101.1 CDS Isop_0963 NC_014962.1 1367010 1369697 R COGs: COG0515 Serine/threonine protein kinase; InterProIPR020635: IPR002290: IPR006626: IPR000719: IPR 017442: IPR008271; KEGG: chl:Chy400_0060 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; Parallel beta-helix repeat; SPTR: Serine/threonine kinase Pkn10; PFAM: Protein kinase domain; TIGRFAM: parallel beta-helix repeat (two copies); serine/threonine protein kinase complement(1367010..1369697) Isosphaera pallida ATCC 43644 10155072 YP_004178102.1 CDS Isop_0964 NC_014962.1 1370243 1371229 R COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509: IPR020904; KEGG: rrs:RoseRS_4078 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family; NAD-dependent epimerase/dehydratase complement(1370243..1371229) Isosphaera pallida ATCC 43644 10155073 YP_004178103.1 CDS Isop_0965 NC_014962.1 1371346 1371804 R KEGG: plm:Plim_2797 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1371346..1371804) Isosphaera pallida ATCC 43644 10155074 YP_004178104.1 CDS Isop_0966 NC_014962.1 1372515 1374260 D KEGG: rba:RB6127 signal peptide; SPTR: Putative uncharacterized protein; hypothetical protein 1372515..1374260 Isosphaera pallida ATCC 43644 10155075 YP_004178105.1 CDS Isop_0967 NC_014962.1 1374257 1375645 D KEGG: rba:RB6127 signal peptide; SPTR: Putative uncharacterized protein; hypothetical protein 1374257..1375645 Isosphaera pallida ATCC 43644 10155076 YP_004178106.1 CDS Isop_0968 NC_014962.1 1375799 1376719 R COGs: COG4589 CDP-diglyceride synthetase/phosphatidate cytidylyltransferase; InterPro IPR000374; KEGG: psl:Psta_0097 phosphatidate cytidylyltransferase; PFAM: phosphatidate cytidylyltransferase; SPTR: Phosphatidate cytidylyltransferase; PFAM: Cytidylyltransferase family; phosphatidate cytidylyltransferase complement(1375799..1376719) Isosphaera pallida ATCC 43644 10155077 YP_004178107.1 CDS Isop_0969 NC_014962.1 1376878 1377795 R COGs: COG0020 Undecaprenyl pyrophosphate synthase; InterPro IPR001441: IPR018520; KEGG: psl:Psta_0098 undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; PRIAM: Di-trans,poly-cis-decaprenylcistransferase; SPTR: Undecaprenyl pyrophosphate synthetase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; Undecaprenyl pyrophosphate synthetase complement(1376878..1377795) Isosphaera pallida ATCC 43644 10155078 YP_004178108.1 CDS Isop_0970 NC_014962.1 1377962 1379257 R COGs: COG0104 Adenylosuccinate synthase; InterPro IPR001114: IPR018220; KEGG: plm:Plim_2072 adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase; PRIAM: Adenylosuccinate synthase; SMART: adenylosuccinate synthetase; SPTR: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; manually curated; PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase; adenylosuccinate synthetase complement(1377962..1379257) Isosphaera pallida ATCC 43644 10155079 YP_004178109.1 CDS Isop_0971 NC_014962.1 1379590 1382364 R InterPro IPR000014: IPR001789: IPR013767: IPR013656; KEGG: mgm:Mmc1_3367 multi-sensor hybrid histidine kinase; PFAM: PAS fold-4 domain protein; PAS fold domain protein; response regulator receiver; SMART: PAS domain containing protein; response regulator receiver; SPTR: Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Response regulator receiver domain; PAS fold; TIGRFAM: PAS domain S-box; PAS sensor protein complement(1379590..1382364) Isosphaera pallida ATCC 43644 10155080 YP_004178110.1 CDS Isop_0972 NC_014962.1 1382528 1383916 R COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: nde:NIDE3566 putative peptidase; PFAM: peptidase M28; SPTR: Aminopeptidase; PFAM: Peptidase family M28; peptidase M28 complement(1382528..1383916) Isosphaera pallida ATCC 43644 10155081 YP_004178111.1 CDS Isop_0973 NC_014962.1 1384300 1384695 D KEGG: xtr:496424 heterogeneous nuclear ribonucleoprotein D-like; SPTR: Heterogeneous nuclear ribonucleoprotein D-like; hypothetical protein 1384300..1384695 Isosphaera pallida ATCC 43644 10155082 YP_004178112.1 CDS Isop_0974 NC_014962.1 1384744 1385958 R COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933: IPR011650: IPR001261; KEGG: psl:Psta_1795 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: Acetylornithine deacetylase; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: acetylornithine deacetylase (ArgE); acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; peptidase M20 complement(1384744..1385958) Isosphaera pallida ATCC 43644 10155083 YP_004178113.1 CDS Isop_0975 NC_014962.1 1386008 1386775 R COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198: IPR002347: IPR020904; KEGG: bbt:BBta_3977 putative 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Putative 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(1386008..1386775) Isosphaera pallida ATCC 43644 10155084 YP_004178114.1 CDS Isop_0976 NC_014962.1 1387154 1388269 D COGs: COG2309 Leucyl aminopeptidase (aminopeptidase T); InterPro IPR000787; KEGG: gym:GYMC10_1924 peptidase M29 aminopeptidase II; PFAM: peptidase M29 aminopeptidase II; SPTR: Peptidase M29 aminopeptidase II; PFAM: Thermophilic metalloprotease (M29); peptidase M29 aminopeptidase II 1387154..1388269 Isosphaera pallida ATCC 43644 10155085 YP_004178115.1 CDS Isop_0977 NC_014962.1 1388206 1388922 R KEGG: ske:Sked_36150 putative collagen-binding protein; SPTR: Putative collagen-binding protein; hypothetical protein complement(1388206..1388922) Isosphaera pallida ATCC 43644 10155086 YP_004178116.1 CDS Isop_0978 NC_014962.1 1389072 1392353 R InterPro IPR000209: IPR018247; KEGG: mar:MAE_50880 hypothetical protein; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: Putative uncharacterized protein; PFAM: Subtilase family; peptidase S8 and S53 subtilisin kexin sedolisin complement(1389072..1392353) Isosphaera pallida ATCC 43644 10155087 YP_004178117.1 CDS Isop_0979 NC_014962.1 1392743 1392880 R hypothetical protein complement(1392743..1392880) Isosphaera pallida ATCC 43644 10155088 YP_004178118.1 CDS Isop_0980 NC_014962.1 1392877 1394184 R COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: pca:Pcar_1263 ADP-heptose--LPS heptosyltransferase II; PFAM: glycosyl transferase family 9; SPTR: Lipopolysaccharide heptosyltransferase II; manually curated; PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase II; glycosyl transferase family protein complement(1392877..1394184) Isosphaera pallida ATCC 43644 10155089 YP_004178119.1 CDS Isop_0981 NC_014962.1 1394360 1395583 R COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: tjr:TherJR_2845 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase complement(1394360..1395583) Isosphaera pallida ATCC 43644 10155090 YP_004178120.1 CDS Isop_0982 NC_014962.1 1395580 1397148 R InterPro IPR002509; KEGG: dat:HRM2_19910 hypothetical protein; PFAM: polysaccharide deacetylase; SPTR: Putative uncharacterized protein; PFAM: Polysaccharide deacetylase; polysaccharide deacetylase complement(1395580..1397148) Isosphaera pallida ATCC 43644 10155091 YP_004178121.1 CDS Isop_0983 NC_014962.1 1397145 1397927 R COGs: COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase; InterPro IPR013216; KEGG: sus:Acid_4738 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: Methyltransferase domain; type 11 methyltransferase complement(1397145..1397927) Isosphaera pallida ATCC 43644 10155092 YP_004178122.1 CDS Isop_0984 NC_014962.1 1397884 1398828 R KEGG: hor:Hore_18870 glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2; hypothetical protein complement(1397884..1398828) Isosphaera pallida ATCC 43644 10155093 YP_004178123.1 CDS Isop_0985 NC_014962.1 1398947 1399921 R COGs: COG1216 glycosyltransferase; InterPro IPR001173: IPR000276; KEGG: sus:Acid_7437 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, family 2; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase complement(1398947..1399921) Isosphaera pallida ATCC 43644 10155094 YP_004178124.1 CDS Isop_0986 NC_014962.1 1400705 1403842 D KEGG: psl:Psta_0111 organic solvent tolerance protein OstA-like protein; SPTR: Organic solvent tolerance protein OstA-like protein; organic solvent tolerance protein OstA-like protein 1400705..1403842 Isosphaera pallida ATCC 43644 10155095 YP_004178125.1 CDS Isop_0987 NC_014962.1 1403984 1404682 D KEGG: eba:ebA607 diacylglycerol kinase; SPTR: Probable diacylglycerol kinase; PFAM: Prokaryotic diacylglycerol kinase; hypothetical protein 1403984..1404682 Isosphaera pallida ATCC 43644 10155096 YP_004178126.1 CDS Isop_0988 NC_014962.1 1404828 1406384 D COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR014105: IPR006076; KEGG: rca:Rcas_2535 zeta-phytoene desaturase; PFAM: FAD dependent oxidoreductase; SPTR: Zeta-phytoene desaturase; TIGRFAM: phytoene desaturase; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase; phytoene desaturase 1404828..1406384 Isosphaera pallida ATCC 43644 10155097 YP_004178127.1 CDS Isop_0989 NC_014962.1 1406381 1407700 D COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: rrs:RoseRS_0386 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, family 2; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase 1406381..1407700 Isosphaera pallida ATCC 43644 10155098 YP_004178128.1 CDS Isop_0990 NC_014962.1 1407550 1411101 R InterPro IPR008009; KEGG: rci:RRC213 hypothetical protein; PFAM: Ig family protein; SPTR: Putative uncharacterized protein; PFAM: Putative Ig domain; Ig family protein complement(1407550..1411101) Isosphaera pallida ATCC 43644 10155099 YP_004178129.1 CDS Isop_0991 NC_014962.1 1411098 1415042 R COGs: COG0515 Serine/threonine protein kinase; InterProIPR020635: IPR002290: IPR019734: IPR000719: IPR 013026: IPR017442: IPR001440: IPR017441: IPR008271; KEGG: plm:Plim_4000 serine/threonine protein kinase-related protein; PFAM: Serine/threonine-protein kinase-like domain; Tetratricopeptide TPR_1 repeat-containing protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; Tetratricopeptide repeat; SPTR: Probable serine/threonine protein kinase; PFAM: Protein kinase domain; Tetratricopeptide repeat; serine/threonine protein kinase complement(1411098..1415042) Isosphaera pallida ATCC 43644 10155100 YP_004178130.1 CDS Isop_0992 NC_014962.1 1415207 1426834 R InterPro IPR001434: IPR008454; KEGG: rca:Rcas_2197 hypothetical protein; PFAM: protein of unknown function DUF11; Cna B domain protein; SPTR: Conserved repeat domain; TIGRFAM: conserved repeat domain protein; TIGRFAM: conserved repeat domain; hypothetical protein complement(1415207..1426834) Isosphaera pallida ATCC 43644 10155101 YP_004178131.1 CDS Isop_0993 NC_014962.1 1427211 1432073 R COGs: COG0515 Serine/threonine protein kinase; InterProIPR020635: IPR002290: IPR000719: IPR017442: IPR 017441: IPR008271; KEGG: psl:Psta_3332 serine/threonine protein kinase with WD40 repeats; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Probable serine/threonine protein kinase; PFAM: Protein kinase domain; serine/threonine protein kinase complement(1427211..1432073) Isosphaera pallida ATCC 43644 10155102 YP_004178132.1 CDS Isop_0994 NC_014962.1 1432535 1432963 D COGs: COG2138 conserved hypothetical protein; InterPro IPR002762; KEGG: plm:Plim_2903 cobalamin (vitamin B12) biosynthesis CbiX protein; PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; SPTR: Cobalamin (Vitamin B12) biosynthesis CbiX protein; PFAM: CbiX; cobalamin (vitamin B12) biosynthesis CbiX protein 1432535..1432963 Isosphaera pallida ATCC 43644 10155103 YP_004178133.1 CDS Isop_0995 NC_014962.1 1433093 1433953 D InterPro IPR002123; KEGG: bse:Bsel_2210 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: Phospholipid/glycerol acyltransferase; PFAM: Acyltransferase; phospholipid/glycerol acyltransferase 1433093..1433953 Isosphaera pallida ATCC 43644 10155104 YP_004178134.1 CDS Isop_0996 NC_014962.1 1434078 1436021 D COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing); InterPro IPR017932: IPR006426: IPR000583: IPR001962; KEGG: dvl:Dvul_0358 asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II; PRIAM: Asparagine synthase (glutamine-hydrolyzing); SPTR: Asparagine synthetase, glutamine-hydrolyzing; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); asparagine synthase 1434078..1436021 Isosphaera pallida ATCC 43644 10155105 YP_004178135.1 CDS Isop_0997 NC_014962.1 1436200 1436604 D KEGG: smt:Smal_3076 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF962); hypothetical protein 1436200..1436604 Isosphaera pallida ATCC 43644 10155106 YP_004178136.1 CDS Isop_0998 NC_014962.1 1436647 1437171 R KEGG: sna:Snas_3664 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1436647..1437171) Isosphaera pallida ATCC 43644 10155107 YP_004178137.1 CDS Isop_0999 NC_014962.1 1437485 1438525 D COGs: COG1090 nucleoside-diphosphate sugar epimerase; InterPro IPR010099: IPR001509: IPR013549; KEGG: cwo:Cwoe_2865 domain of unknown function DUF1731; PFAM: domain of unknown function DUF1731; NAD-dependent epimerase/dehydratase; SPTR: Putative uncharacterized protein; manually curated; PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: conserved hypothetical protein TIGR01777; hypothetical protein 1437485..1438525 Isosphaera pallida ATCC 43644 10155108 YP_004178138.1 CDS Isop_1000 NC_014962.1 1438608 1439240 D KEGG: aav:Aave_1628 prophage tail length tape measure; SPTR: Prophage tail length tape measure; hypothetical protein 1438608..1439240 Isosphaera pallida ATCC 43644 10155109 YP_004178139.1 CDS Isop_1001 NC_014962.1 1439337 1439750 D InterPro IPR001129: IPR001446; KEGG: gvi:glr3057 glutathione S-transferase; PFAM: membrane-associated protein in eicosanoid and glutathione metabolism (MAPEG); SPTR: Glr3057 protein; PFAM: MAPEG family; eicosanoid and glutathione metabolism membrane protein 1439337..1439750 Isosphaera pallida ATCC 43644 10155110 YP_004178140.1 CDS Isop_1002 NC_014962.1 1439799 1440701 R InterPro IPR007087; KEGG: rba:RB12890 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1439799..1440701) Isosphaera pallida ATCC 43644 10155111 YP_004178141.1 CDS Isop_1003 NC_014962.1 1440755 1441159 R KEGG: bbt:BBta_7857 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial regulatory protein, arsR family; ArsR family transcriptional regulator complement(1440755..1441159) Isosphaera pallida ATCC 43644 10155112 YP_004178142.1 CDS Isop_1004 NC_014962.1 1441152 1441757 R InterPro IPR001588; KEGG: aba:Acid345_3138 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1441152..1441757) Isosphaera pallida ATCC 43644 10155113 YP_004178143.1 CDS Isop_1005 NC_014962.1 1442050 1443090 R COGs: COG2441 butyrate kinase; InterPro IPR009927; KEGG: pfu:PF1187 hypothetical protein; PFAM: protein of unknown function DUF1464; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1464); hypothetical protein complement(1442050..1443090) Isosphaera pallida ATCC 43644 10155114 YP_004178144.1 CDS Isop_1006 NC_014962.1 1443148 1444503 R KEGG: tit:Thit_0694 CRISPR-associated protein, TIGR02710 family; SPTR: CRISPR-associated protein, TIGR02710 family; hypothetical protein complement(1443148..1444503) Isosphaera pallida ATCC 43644 10155115 YP_004178145.1 CDS Isop_1007 NC_014962.1 1444531 1445595 R KEGG: tet:TTHERM_00218470 hypothetical protein; SPTR: Exodeoxyribonuclease V, gamma subunit; hypothetical protein complement(1444531..1445595) Isosphaera pallida ATCC 43644 10155116 YP_004178146.1 CDS Isop_1008 NC_014962.1 1445597 1446358 R KEGG: nfi:NFIA_056950 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1445597..1446358) Isosphaera pallida ATCC 43644 10155117 YP_004178147.1 CDS Isop_1009 NC_014962.1 1446355 1447065 R KEGG: rpc:RPC_1740 RNA polymerase sigma factor; SPTR: Sigma-24 (FecI-like); TIGRFAM: RNA polymerase sigma factor, sigma-70 family; hypothetical protein complement(1446355..1447065) Isosphaera pallida ATCC 43644 10155118 YP_004178148.1 CDS Isop_1010 NC_014962.1 1447426 1447806 R KEGG: bvi:Bcep1808_3098 uracil-xanthine permease; SPTR: Putative uncharacterized protein; hypothetical protein complement(1447426..1447806) Isosphaera pallida ATCC 43644 10155119 YP_004178149.1 CDS Isop_1011 NC_014962.1 1447861 1448064 D KEGG: spu:758811 similar to isthmin; hypothetical protein 1447861..1448064 Isosphaera pallida ATCC 43644 10155120 YP_004178150.1 CDS Isop_1012 NC_014962.1 1448237 1449172 R InterPro IPR015259; KEGG: psl:Psta_2659 methylenetetrahydrofolate dehydrogenase (NADP(+)); PFAM: Methylene-tetrahydromethanopterin dehydrogenase; PRIAM: Methylenetetrahydrofolate dehydrogenase (NADP(+)); SPTR: Methylenetetrahydrofolate dehydrogenase (NADP(+)); PFAM: Methylene-tetrahydromethanopterin dehydrogenase, N-terminal; methylenetetrahydrofolate dehydrogenase complement(1448237..1449172) Isosphaera pallida ATCC 43644 10155121 YP_004178151.1 CDS Isop_1013 NC_014962.1 1449437 1449940 R COGs: COG1795 conserved hypothetical protein; InterPro IPR014826; KEGG: plm:Plim_1285 formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme (Fae); SPTR: Formaldehyde-activating enzyme; TIGRFAM: formaldehyde-activating enzyme; PFAM: Formaldehyde-activating enzyme (Fae); TIGRFAM: formaldehyde-activating enzyme; formaldehyde-activating enzyme complement(1449437..1449940) Isosphaera pallida ATCC 43644 10155122 YP_004178152.1 CDS Isop_1014 NC_014962.1 1451015 1452595 D COGs: COG0486 GTPase; InterPro IPR018948: IPR002917: IPR004520; KEGG: plm:Plim_1709 small GTP-binding protein; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related; SPTR: tRNA modification GTPase mnmE; PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein domain; GTP-binding protein TrmE 1451015..1452595 Isosphaera pallida ATCC 43644 10155123 YP_004178153.1 CDS Isop_1015 NC_014962.1 1452930 1454126 D COGs: COG0697 Permease of the drug/metabolite transporter (DMT) superfamily; InterPro IPR000620; KEGG: afw:Anae109_2782 hypothetical protein; PFAM: protein of unknown function DUF6 transmembrane; SPTR: Putative uncharacterized protein; PFAM: EamA-like transporter family; hypothetical protein 1452930..1454126 Isosphaera pallida ATCC 43644 10155124 YP_004178154.1 CDS Isop_1016 NC_014962.1 1454332 1455204 D COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease component; InterPro IPR003453; KEGG: sit:TM1040_1780 hypothetical protein; PFAM: protein of unknown function DUF140; SPTR: Membrane protein; PFAM: Domain of unknown function DUF140; hypothetical protein 1454332..1455204 Isosphaera pallida ATCC 43644 10155125 YP_004178155.1 CDS Isop_1017 NC_014962.1 1455349 1456518 D COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000587: IPR000994; KEGG: plm:Plim_1634 peptidase M24; PFAM: peptidase M24; creatinase; SPTR: Proline dipeptidase; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain; peptidase M24 1455349..1456518 Isosphaera pallida ATCC 43644 10155126 YP_004178156.1 CDS Isop_1018 NC_014962.1 1456777 1457724 D COGs: COG0576 Molecular chaperone GrpE (heat shock protein); InterPro IPR000740; KEGG: cac:CA_C0471 GrpE protein HSP-70 cofactor; PFAM: GrpE protein; SPTR: GrpE protein HSP-70 cofactor; PFAM: GrpE; GrpE protein HSP-70 cofactor 1456777..1457724 Isosphaera pallida ATCC 43644 10155127 YP_004178157.1 CDS Isop_1019 NC_014962.1 1457832 1458824 R COGs: COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB); InterPro IPR011611: IPR002173; KEGG: sth:STH1246 tagatose-6-phosphate kinase; PFAM: PfkB domain protein; SPTR: Tagatose-6-phosphate kinase; PFAM: pfkB family carbohydrate kinase; TIGRFAM: hexose kinase, 1-phosphofructokinase family; PfkB domain-containing protein complement(1457832..1458824) Isosphaera pallida ATCC 43644 10155128 YP_004178158.1 CDS Isop_1020 NC_014962.1 1459164 1459955 D COGs: COG0107 Imidazoleglycerol-phosphate synthase; InterPro IPR004651: IPR006062; KEGG: plm:Plim_2829 imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; SPTR: Imidazole glycerol phosphate synthase subunit hisF; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; imidazole glycerol phosphate synthase subunit hisF 1459164..1459955 Isosphaera pallida ATCC 43644 10155129 YP_004178159.1 CDS Isop_1021 NC_014962.1 1460146 1461339 D COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT; InterPro IPR006321: IPR001482; KEGG: psl:Psta_1744 twitching motility protein; PFAM: type II secretion system protein E; SPTR: Twitching motility protein; TIGRFAM: twitching motility protein; PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT; twitching motility protein 1460146..1461339 Isosphaera pallida ATCC 43644 10155130 YP_004178160.1 CDS Isop_1022 NC_014962.1 1461555 1463357 D COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR001482; KEGG: plm:Plim_0082 type II secretion system protein E; PFAM: type II secretion system protein E; SPTR: Type II secretion system protein E; PFAM: Type II/IV secretion system protein; type II secretion system protein E 1461555..1463357 Isosphaera pallida ATCC 43644 10155131 YP_004178161.1 CDS Isop_1023 NC_014962.1 1463493 1464095 D KEGG: plm:Plim_0083 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Colicin V production protein; hypothetical protein 1463493..1464095 Isosphaera pallida ATCC 43644 10155132 YP_004178162.1 CDS Isop_1024 NC_014962.1 1464068 1464166 R hypothetical protein complement(1464068..1464166) Isosphaera pallida ATCC 43644 10155133 YP_004178163.1 CDS Isop_1025 NC_014962.1 1464163 1464753 R KEGG: plm:Plim_2350 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1464163..1464753) Isosphaera pallida ATCC 43644 10155134 YP_004178164.1 CDS Isop_1026 NC_014962.1 1464868 1466463 D KEGG: plm:Plim_2686 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1464868..1466463 Isosphaera pallida ATCC 43644 10155135 YP_004178165.1 CDS Isop_1027 NC_014962.1 1466535 1466777 R InterPro IPR001648; KEGG: psl:Psta_1727 ribosomal protein S18; PFAM: ribosomal protein S18; SPTR: 30S ribosomal protein S18; TIGRFAM: ribosomal protein S18; PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18; 30S ribosomal protein S18 complement(1466535..1466777) Isosphaera pallida ATCC 43644 10155136 YP_004178166.1 CDS Isop_1028 NC_014962.1 1467198 1469198 D COGs: COG0296 1 4-alpha-glucan branching enzyme; InterPro IPR006589: IPR012768: IPR004193: IPR006047; KEGG: cyb:CYB_2529 malto-oligosyltrehalose trehalohydrolase; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; SMART: alpha amylase catalytic sub domain; SPTR: Malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); TIGRFAM: malto-oligosyltrehalose trehalohydrolase; maltooligosyl trehalose hydrolase 1467198..1469198 Isosphaera pallida ATCC 43644 10155137 YP_004178167.1 CDS Isop_1029 NC_014962.1 1469195 1474723 D COGs: COG3280 Maltooligosyl trehalose synthase; InterPro IPR006589: IPR012767: IPR004300: IPR006047; KEGG: cag:Cagg_2094 maltooligosyl trehalose synthase; PFAM: alpha amylase catalytic region; glycoside hydrolase family 57; SMART: alpha amylase catalytic sub domain; SPTR: Malto-oligosyltrehalose synthase; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: Alpha amylase, catalytic domain; Glycosyl hydrolase family 57; Domain of unknown function (DUF3536); TIGRFAM: malto-oligosyltrehalose synthase; malto-oligosyltrehalose synthase 1469195..1474723 Isosphaera pallida ATCC 43644 10155138 YP_004178168.1 CDS Isop_1030 NC_014962.1 1474801 1475346 D KEGG: adg:Adeg_1075 FMN-dependent alpha-hydroxy acid dehydrogenase; SPTR: Putative PAS/PAC sensor protein; hypothetical protein 1474801..1475346 Isosphaera pallida ATCC 43644 10155139 YP_004178169.1 CDS Isop_1031 NC_014962.1 1475786 1477255 D COGs: COG1690 conserved hypothetical protein; InterPro IPR001233; KEGG: pca:Pcar_0019 hypothetical protein; PFAM: protein of unknown function UPF0027; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein family UPF0027; hypothetical protein 1475786..1477255 Isosphaera pallida ATCC 43644 10155141 YP_004178170.1 CDS Isop_1032 NC_014962.1 1478141 1479256 D COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839: IPR004838; KEGG: psl:Psta_4235 aminotransferase class I and II; PFAM: aminotransferase class I and II; SPTR: Aminotransferase class I and II; PFAM: Aminotransferase class I and II; class I/II aminotransferase 1478141..1479256 Isosphaera pallida ATCC 43644 10155143 YP_004178171.1 CDS Isop_1033 NC_014962.1 1479375 1483304 D COGs: COG0515 Serine/threonine protein kinase; InterProIPR020635: IPR002290: IPR000719: IPR017442: IPR 002355: IPR017441: IPR008271; KEGG: psl:Psta_4528 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain; serine/threonine protein kinase 1479375..1483304 Isosphaera pallida ATCC 43644 10155144 YP_004178172.1 CDS Isop_1034 NC_014962.1 1483442 1485613 R InterPro IPR017871; KEGG: plm:Plim_0078 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1483442..1485613) Isosphaera pallida ATCC 43644 10155145 YP_004178173.1 CDS Isop_1035 NC_014962.1 1485796 1487388 R KEGG: plm:Plim_0077 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1485796..1487388) Isosphaera pallida ATCC 43644 10155146 YP_004178174.1 CDS Isop_1036 NC_014962.1 1487612 1490197 R COGs: COG4972 Tfp pilus assembly protein ATPase PilM; InterPro IPR005883; KEGG: plm:Plim_0076 type IV pilus assembly protein PilM; SPTR: Probable fimbrial assembly protein PilM; TIGRFAM: type IV pilus assembly protein PilM; PFAM: Competence protein A; Cell division protein FtsA; TIGRFAM: type IV pilus assembly protein PilM; type IV pilus assembly protein PilM complement(1487612..1490197) Isosphaera pallida ATCC 43644 10155147 YP_004178175.1 CDS Isop_1037 NC_014962.1 1491003 1494884 D COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014: IPR001610: IPR003661: IPR003594: IPR 001789: IPR005467: IPR013767: IPR013656: IPR004358; KEGG: cyb:CYB_1640 sensory box histidine kinase/response regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; response regulator receiver; SPTR: Sensory box histidine kinase/response regulator; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; PAS/PAC sensor hybrid histidine kinase 1491003..1494884 Isosphaera pallida ATCC 43644 10155148 YP_004178176.1 CDS Isop_1038 NC_014962.1 1495202 1497949 D COGs: COG0178 Excinuclease ATPase subunit; InterPro IPR004602: IPR003439: IPR017871; KEGG: rba:RB10876 excinuclease ABC subunit A; PFAM: ABC transporter related; SPTR: Excinuclease ABC subunit A; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit; excinuclease ABC subunit A 1495202..1497949 Isosphaera pallida ATCC 43644 10155149 YP_004178177.1 CDS Isop_1039 NC_014962.1 1497946 1498638 R COGs: COG2121 conserved hypothetical protein; InterPro IPR007172; KEGG: psl:Psta_3561 protein of unknown function DUF374; PFAM: protein of unknown function DUF374; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF374); hypothetical protein complement(1497946..1498638) Isosphaera pallida ATCC 43644 10155150 YP_004178178.1 CDS Isop_1040 NC_014962.1 1498697 1499560 D COGs: COG3142 Uncharacterized protein involved in copper resistance; InterPro IPR005627; KEGG: hsa:51076 cutC copper transporter homolog (E. coli); PFAM: CutC family protein; SPTR: CGI-32 protein; PFAM: CutC family; CutC family protein 1498697..1499560 Isosphaera pallida ATCC 43644 10155151 YP_004178179.1 CDS Isop_1041 NC_014962.1 1499645 1501711 D COGs: COG0443 Molecular chaperone; InterPro IPR002035: IPR013126: IPR001023: IPR018181; KEGG: cac:CA_C0473 heat shock protein DnaK; PFAM: Heat shock protein 70; von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: DnaK protein (Heat shock protein), C-terminal region has VWA type A domain; PFAM: Hsp70 protein; von Willebrand factor type A domain; Heat shock protein 70 1499645..1501711 Isosphaera pallida ATCC 43644 10155152 YP_004178180.1 CDS Isop_1043 NC_014962.1 1502049 1502405 D COGs: COG2076 Membrane transporter of cations and cationic drugs; InterPro IPR000390; KEGG: mei:Msip34_1120 small multidrug resistance protein; PFAM: small multidrug resistance protein; SPTR: Small multidrug resistance protein; PFAM: Small Multidrug Resistance protein; small multidrug resistance protein 1502049..1502405 Isosphaera pallida ATCC 43644 10155154 YP_004178181.1 CDS Isop_1044 NC_014962.1 1502453 1502935 D COGs: COG0295 Cytidine deaminase; InterPro IPR006262: IPR002125: IPR016192; KEGG: ote:Oter_2657 cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; SPTR: Cytidine deaminase; TIGRFAM: cytidine deaminase; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric; cytidine deaminase 1502453..1502935 Isosphaera pallida ATCC 43644 10155155 YP_004178182.1 CDS Isop_1045 NC_014962.1 1503205 1504902 D COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873: IPR020845; KEGG: sus:Acid_0587 2-acyl-glycerophospho-ethanolamine acyltransferase; PFAM: AMP-dependent synthetase and ligase; SPTR: AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme; AMP-dependent synthetase and ligase 1503205..1504902 Isosphaera pallida ATCC 43644 10155156 YP_004178183.1 CDS Isop_1046 NC_014962.1 1504981 1505355 R COGs: COG1917 conserved hypothetical protein contains double-stranded beta-helix domain; InterPro IPR013096; KEGG: psl:Psta_3892 cupin 2 conserved barrel domain protein; PFAM: Cupin 2 conserved barrel domain protein; SPTR: Cupin 2 conserved barrel domain protein; PFAM: Cupin domain; cupin complement(1504981..1505355) Isosphaera pallida ATCC 43644 10155157 YP_004178184.1 CDS Isop_1047 NC_014962.1 1505361 1506785 R KEGG: rba:RB8370 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Planctomycete cytochrome C; hypothetical protein complement(1505361..1506785) Isosphaera pallida ATCC 43644 10155158 YP_004178185.1 CDS Isop_1048 NC_014962.1 1507331 1507549 D COGs: COG0361 Translation initiation factor 1 (IF-1); InterPro IPR006196: IPR004368; KEGG: tme:Tmel_0976 translation initiation factor IF-1; PFAM: S1 IF1 family protein; SPTR: Probable translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1; translation initiation factor 1 (bIF-1) 1507331..1507549 Isosphaera pallida ATCC 43644 10155159 YP_004178186.1 CDS Isop_1049 NC_014962.1 1507746 1508882 R COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; KEGG: geo:Geob_3152 3-beta hydroxysteroid dehydrogenase/isomerase; SPTR: 3-beta hydroxysteroid dehydrogenase/isomerase; PFAM: 3-beta hydroxysteroid dehydrogenase/isomerase family; 3-beta hydroxysteroid dehydrogenase/isomerase complement(1507746..1508882) Isosphaera pallida ATCC 43644 10155160 YP_004178187.1 CDS Isop_1050 NC_014962.1 1508904 1510682 R COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873: IPR020845; KEGG: geo:Geob_3151 peptide synthase; PFAM: AMP-dependent synthetase and ligase; SPTR: AMP-dependent synthetase and ligase; PFAM: AMP-binding enzyme; AMP-dependent synthetase and ligase complement(1508904..1510682) Isosphaera pallida ATCC 43644 10155161 YP_004178188.1 CDS Isop_1051 NC_014962.1 1511206 1512342 D COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: sus:Acid_4848 beta-lactamase; PFAM: beta-lactamase; SPTR: Beta-lactamase; PFAM: Beta-lactamase; beta-lactamase 1511206..1512342 Isosphaera pallida ATCC 43644 10155162 YP_004178189.1 CDS Isop_1052 NC_014962.1 1512350 1513399 R COGs: COG1134 ABC-type polysaccharide/polyol phosphate transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: gur:Gura_2358 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter; ABC transporter-like protein complement(1512350..1513399) Isosphaera pallida ATCC 43644 10155163 YP_004178190.1 CDS Isop_1053 NC_014962.1 1513423 1514355 R COGs: COG1682 ABC-type polysaccharide/polyol phosphate export systems permease component; InterPro IPR000412: IPR013525: IPR013526; KEGG: bts:Btus_0876 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter; PFAM: ABC-2 type transporter; ABC-2 type transporter complement(1513423..1514355) Isosphaera pallida ATCC 43644 10155164 YP_004178191.1 CDS Isop_1054 NC_014962.1 1514783 1515586 D COGs: COG3836 2 4-dihydroxyhept-2-ene-1 7-dioic acid aldolase; InterPro IPR005000; KEGG: plm:Plim_3155 2-dehydro-3-deoxyglucarate aldolase; PFAM: HpcH/HpaI aldolase; PRIAM: 4-hydroxy-2-oxovalerate aldolase; SPTR: 2-dehydro-3-deoxyglucarate aldolase; PFAM: HpcH/HpaI aldolase/citrate lyase family; 4-hydroxy-2-oxovalerate aldolase 1514783..1515586 Isosphaera pallida ATCC 43644 10155165 YP_004178192.1 CDS Isop_1055 NC_014962.1 1515802 1516386 R COGs: COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; InterPro IPR003697; KEGG: rba:RB1703 maf protein; PFAM: Maf family protein; SPTR: Maf protein; TIGRFAM: maf protein; PFAM: Maf-like protein; TIGRFAM: MAF protein; maf protein complement(1515802..1516386) Isosphaera pallida ATCC 43644 10155167 YP_004178193.1 CDS Isop_1056 NC_014962.1 1516589 1518391 D COGs: COG0155 Sulfite reductase beta subunit (hemoprotein); InterPro IPR005117: IPR006067: IPR006066; KEGG: psl:Psta_1330 sulfite reductase (NADPH); PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; PRIAM: Sulfite reductase (NADPH); SPTR: Sulfite reductase; PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: ferredoxin-sulfite reductase; sulfite reductase (NADPH) subunit beta 1516589..1518391 Isosphaera pallida ATCC 43644 10155168 YP_004178194.1 CDS Isop_1057 NC_014962.1 1518696 1520345 R COGs: COG2759 Formyltetrahydrofolate synthetase; InterPro IPR000559: IPR020628; KEGG: amu:Amuc_1860 formate--tetrahydrofolate ligase; PFAM: formate-tetrahydrofolate ligase FTHFS; PRIAM: Formate--tetrahydrofolate ligase; SPTR: Formate--tetrahydrofolate ligase; PFAM: Formate--tetrahydrofolate ligase; formate-tetrahydrofolate ligase complement(1518696..1520345) Isosphaera pallida ATCC 43644 10155169 YP_004178195.1 CDS Isop_1058 NC_014962.1 1520549 1522258 R COGs: COG0486 GTPase; InterPro IPR002917; KEGG: alv:Alvin_1744 GTP-binding protein HSR1-related protein; PFAM: GTP-binding protein HSR1-related; SPTR: GTP-binding protein HSR1-related protein; PFAM: GTPase of unknown function; GTP-binding protein HSR1-like protein complement(1520549..1522258) Isosphaera pallida ATCC 43644 10155170 YP_004178196.1 CDS Isop_1059 NC_014962.1 1522295 1523584 R COGs: COG3597 Uncharacterized protein/domain associated with GTPase; KEGG: alv:Alvin_1745 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: GTPase of unknown function; Domain of unknown function (DUF697); hypothetical protein complement(1522295..1523584) Isosphaera pallida ATCC 43644 10155171 YP_004178197.1 CDS Isop_1060 NC_014962.1 1523677 1525161 R COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001367: IPR001626; KEGG: psl:Psta_4677 ABC-3 protein; PFAM: ABC-3 protein; iron dependent repressor; SMART: iron dependent repressor; SPTR: ABC-3 protein; PFAM: ABC 3 transport family; Iron dependent repressor, metal binding and dimerisation domain; ABC-3 protein complement(1523677..1525161) Isosphaera pallida ATCC 43644 10155172 YP_004178198.1 CDS Isop_1061 NC_014962.1 1525158 1526243 R COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: psl:Psta_4676 ABC-3 protein; PFAM: ABC-3 protein; SPTR: ABC-3 protein; PFAM: ABC 3 transport family; ABC-3 protein complement(1525158..1526243) Isosphaera pallida ATCC 43644 10155173 YP_004178199.1 CDS Isop_1062 NC_014962.1 1526312 1527166 R COGs: COG1121 ABC-type Mn/Zn transport systems ATPase component; InterPro IPR003593: IPR003439: IPR017871; KEGG: psl:Psta_4675 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter; ABC transporter-like protein complement(1526312..1527166) Isosphaera pallida ATCC 43644 10155174 YP_004178200.1 CDS Isop_1063 NC_014962.1 1527163 1528200 R COGs: COG0803 ABC-type metal ion transport system periplasmic component/surface adhesin; InterPro IPR006311: IPR006127: IPR006128: IPR006129; KEGG: sth:STH1506 ABC transporter permease protein; PFAM: periplasmic solute binding protein; SPTR: ABC transporter permease protein; PFAM: Periplasmic solute binding protein family; periplasmic solute-binding protein complement(1527163..1528200) Isosphaera pallida ATCC 43644 10155175 YP_004178201.1 CDS Isop_1064 NC_014962.1 1528682 1529905 D COGs: COG0337 3-dehydroquinate synthetase; InterPro IPR016303: IPR002658; KEGG: rba:RB6147 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; PRIAM: 3-dehydroquinate synthase; SPTR: 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; 3-dehydroquinate synthase 1528682..1529905 Isosphaera pallida ATCC 43644 10155176 YP_004178202.1 CDS Isop_1065 NC_014962.1 1529962 1531068 R COGs: COG3483 Tryptophan 2 3-dioxygenase (vermilion); InterPro IPR004981; KEGG: rso:RS01755 putative tryptophan-2,3-dioxygenase oxidoreductase protein; PFAM: tryptophan 23-dioxygenase; SPTR: Tryptophan 2 3 dioxygenase; PFAM: Tryptophan 2,3-dioxygenase; tryptophan 23-dioxygenase complement(1529962..1531068) Isosphaera pallida ATCC 43644 10155177 YP_004178203.1 CDS Isop_1066 NC_014962.1 1531065 1534400 R COGs: COG1197 Transcription-repair coupling factor (superfamily II helicase); InterProIPR014001: IPR001650: IPR014021: IPR004576: IPR 003711: IPR011545: IPR005118; KEGG: plm:Plim_3728 transcription-repair coupling factor; PFAM: DEAD/DEAH box helicase domain protein; transcription factor CarD; helicase domain protein; TRCF domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: Transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd); transcription-repair coupling factor complement(1531065..1534400) Isosphaera pallida ATCC 43644 10155178 YP_004178204.1 CDS Isop_1067 NC_014962.1 1534390 1535307 R KEGG: tro:trd_0686 transcriptional regulator; SPTR: Putative regulatory protein; hypothetical protein complement(1534390..1535307) Isosphaera pallida ATCC 43644 10155179 YP_004178205.1 CDS Isop_1068 NC_014962.1 1535558 1535692 D hypothetical protein 1535558..1535692 Isosphaera pallida ATCC 43644 10155180 YP_004178206.1 CDS Isop_1069 NC_014962.1 1535664 1537265 D KEGG: fra:Francci3_2916 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2029); hypothetical protein 1535664..1537265 Isosphaera pallida ATCC 43644 10155181 YP_004178207.1 CDS Isop_1070 NC_014962.1 1537432 1538562 D COGs: COG0196 FAD synthase; InterPro IPR015864: IPR015865; KEGG: psl:Psta_3846 riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase; FAD synthetase; SPTR: Riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; Riboflavin kinase 1537432..1538562 Isosphaera pallida ATCC 43644 10155182 YP_004178208.1 CDS Isop_1071 NC_014962.1 1538921 1539559 R InterPro IPR010719; KEGG: rmr:Rmar_1203 putative rRNA methylase; PFAM: rRNA methylase; SPTR: Putative rRNA methylase; PFAM: Putative rRNA methylase; rRNA methylase complement(1538921..1539559) Isosphaera pallida ATCC 43644 10155183 YP_004178209.1 CDS Isop_1072 NC_014962.1 1539598 1540095 R COGs: COG4767 Glycopeptide antibiotics resistance protein; InterPro IPR006976; KEGG: cac:CA_C0829 hypothetical protein; PFAM: VanZ family protein; SPTR: VanZ family protein; PFAM: VanZ like family; VanZ family protein complement(1539598..1540095) Isosphaera pallida ATCC 43644 10155184 YP_004178210.1 CDS Isop_1073 NC_014962.1 1540470 1545371 D COGs: COG4935 Regulatory P domain of the subtilisin-like proprotein convertase and other protease; InterPro IPR000209: IPR002884; KEGG: mar:MAE_12430 hypothetical protein; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Proprotein convertase P; SPTR: Putative uncharacterized protein; PFAM: Proprotein convertase P-domain; Subtilase family; peptidase S8 and S53 subtilisin kexin sedolisin 1540470..1545371 Isosphaera pallida ATCC 43644 10155185 YP_004178211.1 CDS Isop_1074 NC_014962.1 1545521 1546417 D COGs: COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin; InterPro IPR008775; KEGG: psl:Psta_2684 phytanoyl-CoA dioxygenase; PFAM: Phytanoyl-CoA dioxygenase; SPTR: Syringomycin biosynthesis enzyme 2-like protein; PFAM: Phytanoyl-CoA dioxygenase (PhyH); Phytanoyl-CoA dioxygenase 1545521..1546417 Isosphaera pallida ATCC 43644 10155186 YP_004178212.1 CDS Isop_1075 NC_014962.1 1546470 1547798 D COGs: COG0673 dehydrogenase and related protein; InterPro IPR017909: IPR000683; KEGG: plm:Plim_0006 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase domain-containing protein 1546470..1547798 Isosphaera pallida ATCC 43644 10155187 YP_004178213.1 CDS Isop_1076 NC_014962.1 1547919 1548830 D COGs: COG1475 transcriptional regulator protein; InterPro IPR003115: IPR004437: IPR001387; KEGG: rba:RB2296 chromosome partitioning protein ParB; PFAM: ParB domain protein nuclease; helix-turn-helix domain protein; SMART: ParB domain protein nuclease; SPTR: Probable chromosome partitioning protein parB; TIGRFAM: parB-like partition protein; PFAM: Helix-turn-helix; ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins; parB-like partition protein 1547919..1548830 Isosphaera pallida ATCC 43644 10155188 YP_004178214.1 CDS Isop_1077 NC_014962.1 1549145 1550461 D COGs: COG0205 6-phosphofructokinase; InterPro IPR011403: IPR000023; KEGG: psl:Psta_4392 6-phosphofructokinase; PFAM: phosphofructokinase; SPTR: 6-phosphofructokinase; PFAM: Phosphofructokinase; phosphofructokinase 1549145..1550461 Isosphaera pallida ATCC 43644 10155189 YP_004178215.1 CDS Isop_1078 NC_014962.1 1550727 1550981 D KEGG: fre:Franean1_2999 MmpL domain-containing protein; SPTR: MMPL domain protein; MmpL domain-containing protein 1550727..1550981 Isosphaera pallida ATCC 43644 10155190 YP_004178216.1 CDS Isop_1079 NC_014962.1 1551114 1552943 R COGs: COG0793 Periplasmic protease; InterPro IPR001478: IPR005151: IPR004447; KEGG: rba:RB3195 carboxyl-terminal processing protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; SPTR: Carboxyl-terminal processing protease; TIGRFAM: carboxyl-terminal protease; PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); carboxyl-terminal protease complement(1551114..1552943) Isosphaera pallida ATCC 43644 10155191 YP_004178217.1 CDS Isop_1080 NC_014962.1 1553505 1554716 R COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mxa:MXAN_1030 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase complement(1553505..1554716) Isosphaera pallida ATCC 43644 10155192 YP_004178218.1 CDS Isop_1081 NC_014962.1 1554788 1555042 R KEGG: eba:ebB145 acyl carrier protein; SPTR: Predicted acyl carrier protein; PFAM: Phosphopantetheine attachment site; acyl carrier protein complement(1554788..1555042) Isosphaera pallida ATCC 43644 10155193 YP_004178219.1 CDS Isop_1082 NC_014962.1 1555561 1556280 D COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR003715; KEGG: rba:RB754 polysaccharide export protein; PFAM: polysaccharide export protein; SPTR: Probable polysaccharide export protein; PFAM: Polysaccharide biosynthesis/export protein; polysaccharide export protein 1555561..1556280 Isosphaera pallida ATCC 43644 10155194 YP_004178220.1 CDS Isop_1083 NC_014962.1 1556371 1557348 R InterPro IPR001509; KEGG: xac:XAC4039 hypothetical protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Putative uncharacterized protein; NAD-dependent epimerase/dehydratase complement(1556371..1557348) Isosphaera pallida ATCC 43644 10155195 YP_004178221.1 CDS Isop_1084 NC_014962.1 1557775 1559067 R COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; InterPro IPR004839: IPR004838; KEGG: pth:PTH_1314 histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; PFAM: aminotransferase class I and II; SPTR: Aminotransferase class I and II; manually curated; PFAM: Aminotransferase class I and II; class I/II aminotransferase complement(1557775..1559067) Isosphaera pallida ATCC 43644 10155196 YP_004178222.1 CDS Isop_1085 NC_014962.1 1559351 1559557 R InterPro IPR017136; KEGG: dge:Dgeo_1820 hypothetical protein; PFAM: Uncharacterised conserved protein UCP037205; SPTR: Zn-ribbon protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2256); hypothetical protein complement(1559351..1559557) Isosphaera pallida ATCC 43644 10155197 YP_004178223.1 CDS Isop_1086 NC_014962.1 1559633 1560955 R COGs: COG1058 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; InterPro IPR008135: IPR008136: IPR001453; KEGG: rxy:Rxyl_2558 competence/damage-inducible protein CinA; PFAM: CinA domain protein; molybdopterin binding domain; SPTR: CinA-like protein; TIGRFAM: competence/damage-inducible protein CinA; PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-terminal domain; molybdenum cofactor synthesis domain; competence/damage-inducible protein CinA complement(1559633..1560955) Isosphaera pallida ATCC 43644 10155198 YP_004178224.1 CDS Isop_1087 NC_014962.1 1561774 1562373 D COGs: COG1403 Restriction endonuclease; InterPro IPR003615: IPR002711; KEGG: plm:Plim_1211 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: HNH endonuclease domain protein; PFAM: HNH endonuclease; HNH endonuclease 1561774..1562373 Isosphaera pallida ATCC 43644 10155199 YP_004178225.1 CDS Isop_1088 NC_014962.1 1562636 1563628 D COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509: IPR008089; KEGG: rca:Rcas_3656 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family; NAD-dependent epimerase/dehydratase 1562636..1563628 Isosphaera pallida ATCC 43644 10155200 YP_004178226.1 CDS Isop_1089 NC_014962.1 1563778 1564083 D KEGG: msl:Msil_3355 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1563778..1564083 Isosphaera pallida ATCC 43644 10155201 YP_004178227.1 CDS Isop_1090 NC_014962.1 1564259 1566385 R KEGG: rba:RB9030 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1564259..1566385) Isosphaera pallida ATCC 43644 10155202 YP_004178228.1 CDS Isop_1091 NC_014962.1 1566748 1569642 D COGs: COG0550 Topoisomerase IA; InterProIPR006154: IPR003601: IPR003602: IPR005733: IPR 006171: IPR013497: IPR013498: IPR000380; KEGG: hau:Haur_4389 DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; DNA topoisomerase type IA zn finger domain protein; PRIAM: DNA topoisomerase; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein; SPTR: DNA topoisomerase; TIGRFAM: DNA topoisomerase I; PFAM: Toprim domain; Topoisomerase DNA binding C4 zinc finger; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial; DNA topoisomerase I 1566748..1569642 Isosphaera pallida ATCC 43644 10155203 YP_004178229.1 CDS Isop_1092 NC_014962.1 1569923 1570456 R COGs: COG0736 Phosphopantetheinyl transferase (holo-ACP synthase); InterPro IPR004568: IPR002582: IPR008278; KEGG: psl:Psta_3536 holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; SPTR: Acyl-carrier protein synthase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantethiene--protein transferase domain; holo-[acyl-carrier-protein] synthase; holo-acyl-carrier-protein synthase complement(1569923..1570456) Isosphaera pallida ATCC 43644 10155204 YP_004178230.1 CDS Isop_1093 NC_014962.1 1570932 1571117 D hypothetical protein 1570932..1571117 Isosphaera pallida ATCC 43644 10155205 YP_004178231.1 CDS Isop_1094 NC_014962.1 1571142 1572398 D COGs: COG2335 Secreted and surface protein containing fasciclin-like repeats; InterPro IPR000782; KEGG: rsk:RSKD131_2807 beta-Ig-H3/fasciclin precursor; PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin; SPTR: Beta-Ig-H3/Fasciclin; PFAM: Fasciclin domain; beta-Ig-H3/fasciclin 1571142..1572398 Isosphaera pallida ATCC 43644 10155206 YP_004178232.1 CDS Isop_1095 NC_014962.1 1572978 1574042 D COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR011912: IPR001509; KEGG: dvu:DVU0481 ADP-L-glycero-D-mannoheptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: ADP-L-glycero-D-manno-heptose-6-epimerase; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; ADP-L-glycero-D-manno-heptose-6-epimerase 1572978..1574042 Isosphaera pallida ATCC 43644 10155208 YP_004178233.1 CDS Isop_1096 NC_014962.1 1574421 1575491 D COGs: COG1899 Deoxyhypusine synthase; InterPro IPR002773; KEGG: aca:ACP_1729 deoxyhypusine synthase-like protein; PFAM: deoxyhypusine synthase; SPTR: Deoxyhypusine synthase family protein; PFAM: Deoxyhypusine synthase; TIGRFAM: deoxyhypusine synthase; homospermidine synthase 1574421..1575491 Isosphaera pallida ATCC 43644 10155209 YP_004178234.1 CDS Isop_1097 NC_014962.1 1575564 1576325 D InterPro IPR014346: IPR003675; KEGG: amr:AM1_1967 CAAX prenyl protease-related protein, putative; PFAM: Abortive infection protein; SPTR: Caax prenyl protease-related protein, putative; TIGRFAM: CAAX prenyl protease-related protein; PFAM: CAAX amino terminal protease family; TIGRFAM: CAAX prenyl protease-related protein; CAAX prenyl protease-like protein 1575564..1576325 Isosphaera pallida ATCC 43644 10155210 YP_004178235.1 CDS Isop_1098 NC_014962.1 1576503 1579193 D COGs: COG3391 conserved hypothetical protein; InterPro IPR011964: IPR007312; KEGG: sus:Acid_4558 YVTN beta-propeller repeat-containing protein; PFAM: phosphoesterase; SPTR: 40-residue YVTN family beta-propeller repeat protein; TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; PFAM: Phosphoesterase family; 3-carboxy-cis,cis-muconate lactonizing enzyme; TIGRFAM: 40-residue YVTN family beta-propeller repeat; 40-residue YVTN family beta-propeller repeat-containing protein 1576503..1579193 Isosphaera pallida ATCC 43644 10155211 YP_004178236.1 CDS Isop_1099 NC_014962.1 1579394 1580731 D COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: nhl:Nhal_0824 efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter MFP subunit 1579394..1580731 Isosphaera pallida ATCC 43644 10155212 YP_004178237.1 CDS Isop_1100 NC_014962.1 1580728 1584237 D COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: nhl:Nhal_0822 acriflavin resistance protein; PFAM: acriflavin resistance protein; SPTR: Acriflavin resistance protein; PFAM: AcrB/AcrD/AcrF family; acriflavin resistance protein 1580728..1584237 Isosphaera pallida ATCC 43644 10155213 YP_004178238.1 CDS Isop_1101 NC_014962.1 1584490 1585416 R KEGG: ami:Amir_6377 RNA polymerase, sigma-24 subunit, ECF subfamily; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; hypothetical protein complement(1584490..1585416) Isosphaera pallida ATCC 43644 10155214 YP_004178239.1 CDS Isop_1102 NC_014962.1 1585413 1587707 R InterPro IPR013517; KEGG: rba:RB8789 hypothetical protein; PFAM: FG-GAP repeat protein; SPTR: Putative uncharacterized protein; PFAM: FG-GAP repeat; FG-GAP repeat-containing protein complement(1585413..1587707) Isosphaera pallida ATCC 43644 10155215 YP_004178240.1 CDS Isop_1103 NC_014962.1 1587908 1590088 R COGs: COG3808 Inorganic pyrophosphatase; InterPro IPR004131; KEGG: pvi:Cvib_0758 membrane-bound proton-translocating pyrophosphatase; PFAM: Inorganic H pyrophosphatase; PRIAM: Inorganic diphosphatase; SPTR: V-type H(+)-translocating pyrophosphatase; TIGRFAM: V-type H(+)-translocating pyrophosphatase; PFAM: Inorganic H+ pyrophosphatase; TIGRFAM: vacuolar-type H(+)-translocating pyrophosphatase; V-type H(+)-translocating pyrophosphatase complement(1587908..1590088) Isosphaera pallida ATCC 43644 10155216 YP_004178241.1 CDS Isop_1104 NC_014962.1 1590480 1594901 R COGs: COG1530 Ribonuclease G and E; InterPro IPR003029: IPR004659: IPR019307; KEGG: psl:Psta_2436 ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein; SPTR: Ribonuclease, Rne/Rng family; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family; ribonuclease, Rne/Rng family complement(1590480..1594901) Isosphaera pallida ATCC 43644 10155217 YP_004178242.1 CDS Isop_1105 NC_014962.1 1595118 1595528 R KEGG: lch:Lcho_2901 hypothetical protein; SPTR: Helicase; hypothetical protein complement(1595118..1595528) Isosphaera pallida ATCC 43644 10155218 YP_004178243.1 CDS Isop_1106 NC_014962.1 1595467 1596462 R COGs: COG5011 conserved hypothetical protein; InterPro IPR018768; KEGG: afw:Anae109_0737 radical SAM domain-containing protein; PFAM: Protein of unknown function DUF2344; SPTR: Radical SAM domain protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2344); hypothetical protein complement(1595467..1596462) Isosphaera pallida ATCC 43644 10155219 YP_004178244.1 CDS Isop_1107 NC_014962.1 1596459 1598471 R COGs: COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component); InterPro IPR006318: IPR008731: IPR008279: IPR000121; KEGG: plm:Plim_0359 phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region; SPTR: Phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; phosphoenolpyruvate-protein phosphotransferase complement(1596459..1598471) Isosphaera pallida ATCC 43644 10155220 YP_004178245.1 CDS Isop_1108 NC_014962.1 1598468 1598833 R COGs: COG1925 Phosphotransferase system HPr-related protein; InterPro IPR000032: IPR005698; KEGG: gau:GAU_1482 phosphocarrier protein HPr; PFAM: phosphoryl transfer system HPr; SPTR: Phosphocarrier protein HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family; phosphotransferase system, phosphocarrier protein HPr complement(1598468..1598833) Isosphaera pallida ATCC 43644 10155221 YP_004178246.1 CDS Isop_1109 NC_014962.1 1599289 1599768 R COGs: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); InterPro IPR002178; KEGG: plm:Plim_0361 phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; SPTR: Phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN complement(1599289..1599768) Isosphaera pallida ATCC 43644 10155222 YP_004178247.1 CDS Isop_1110 NC_014962.1 1600321 1600569 D KEGG: xop:PXO_05780 ISXo8 transposase; SPTR: ISXo8 transposase; hypothetical protein 1600321..1600569 Isosphaera pallida ATCC 43644 10155223 YP_004178248.1 CDS Isop_1111 NC_014962.1 1600754 1601524 R InterPro IPR000387: IPR004861; KEGG: geo:Geob_0068 protein tyrosine/serine phosphatase; PFAM: tyrosine phosphatase; SPTR: Protein tyrosine/serine phosphatase; PFAM: Tyrosine phosphatase family; tyrosine phosphatase complement(1600754..1601524) Isosphaera pallida ATCC 43644 10155224 YP_004178249.1 CDS Isop_1112 NC_014962.1 1601885 1602307 R COGs: COG1371 conserved hypothetical protein; InterPro IPR002804; KEGG: rmr:Rmar_0655 protein of unknown function DUF101; PFAM: protein of unknown function DUF101; SPTR: Putative uncharacterized protein; PFAM: Archease protein family (DUF101/UPF0211); hypothetical protein complement(1601885..1602307) Isosphaera pallida ATCC 43644 10155225 YP_004178250.1 CDS Isop_1113 NC_014962.1 1602468 1602734 R KEGG: fal:FRAAL3740 epoxide hydrolase; SPTR: Whole genome shotgun sequence assembly, scaffold_116; hypothetical protein complement(1602468..1602734) Isosphaera pallida ATCC 43644 10155226 YP_004178251.1 CDS Isop_1114 NC_014962.1 1602786 1607666 D COGs: COG1450 Type II secretory pathway component PulD; InterPro IPR019734: IPR001440: IPR004846; KEGG: plm:Plim_0641 hypothetical protein; PFAM: type II and III secretion system protein; Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial type II and III secretion system protein; type II and III secretion system protein 1602786..1607666 Isosphaera pallida ATCC 43644 10155227 YP_004178252.1 CDS Isop_1115 NC_014962.1 1607843 1609843 R KEGG: clu:CLUG_03274 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1607843..1609843) Isosphaera pallida ATCC 43644 10155228 YP_004178253.1 CDS Isop_1116 NC_014962.1 1610400 1610624 D KEGG: syr:SynRCC307_1777 hypothetical protein; hypothetical protein 1610400..1610624 Isosphaera pallida ATCC 43644 10155229 YP_004178254.1 CDS Isop_1117 NC_014962.1 1610661 1611206 D InterPro IPR001701; KEGG: tfu:Tfu_2176 endoglucanase; PFAM: glycoside hydrolase family 9; SPTR: Endoglucanase. Glycosyl Hydrolase family 9; PFAM: Glycosyl hydrolase family 9; glycoside hydrolase family protein 1610661..1611206 Isosphaera pallida ATCC 43644 10155230 YP_004178255.1 CDS Isop_1118 NC_014962.1 1611328 1614552 R COGs: COG3119 Arylsulfatase A; InterPro IPR000917: IPR022272; KEGG: plm:Plim_3419 sulfatase; PFAM: sulfatase; SPTR: Sulfatase; PFAM: Sulfatase; TIGRFAM: choline-sulfatase; sulfatase complement(1611328..1614552) Isosphaera pallida ATCC 43644 10155231 YP_004178256.1 CDS Isop_1119 NC_014962.1 1614720 1615199 D KEGG: hoh:Hoch_0150 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF2760); hypothetical protein 1614720..1615199 Isosphaera pallida ATCC 43644 10155232 YP_004178257.1 CDS Isop_1120 NC_014962.1 1615248 1615892 D KEGG: aca:ACP_0440 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1615248..1615892 Isosphaera pallida ATCC 43644 10155233 YP_004178258.1 CDS Isop_1121 NC_014962.1 1615899 1616969 R COGs: COG0158 Fructose-1 6-bisphosphatase; InterPro IPR000146; KEGG: amr:AM1_6321 fructose-1,6-bisphosphatase; PFAM: Inositol phosphatase/fructose-16-bisphosphatase; SPTR: Fructose-1,6-bisphosphatase class 1 2; PFAM: Fructose-1-6-bisphosphatase; inositol phosphatase/fructose-16-bisphosphatase complement(1615899..1616969) Isosphaera pallida ATCC 43644 10155234 YP_004178259.1 CDS Isop_1122 NC_014962.1 1617121 1618302 D COGs: COG3288 NAD/NADP transhydrogenase alpha subunit; InterPro IPR007886: IPR007698; KEGG: sus:Acid_3375 NAD(P) transhydrogenase subunit alpha; PFAM: alanine dehydrogenase/PNT domain protein; SPTR: Alanine dehydrogenase/PNT domain protein; PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: NAD(P) transhydrogenase, alpha subunit; alanine dehydrogenase/PNT domain-containing protein 1617121..1618302 Isosphaera pallida ATCC 43644 10155235 YP_004178260.1 CDS Isop_1123 NC_014962.1 1618438 1618803 D COGs: COG3288 NAD/NADP transhydrogenase alpha subunit; KEGG: hoh:Hoch_1909 oxidoreductase; SPTR: Proton-translocating transhydrogenase subunit alpha 2; hypothetical protein 1618438..1618803 Isosphaera pallida ATCC 43644 10155236 YP_004178261.1 CDS Isop_1124 NC_014962.1 1618943 1620355 D COGs: COG1282 NAD/NADP transhydrogenase beta subunit; InterPro IPR012136: IPR004003; KEGG: lbf:LBF_0176 NAD(P)(+) transhydrogenase subunit beta; PFAM: NAD(P) transhydrogenase beta subunit; PRIAM: NAD(P)(+) transhydrogenase (AB-specific); SPTR: NAD(P) transhydrogenase subunit beta; PFAM: NAD(P) transhydrogenase beta subunit; NAD(P)(+) transhydrogenase 1618943..1620355 Isosphaera pallida ATCC 43644 10155237 YP_004178262.1 CDS Isop_1125 NC_014962.1 1620408 1621616 R COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR004839: IPR001917; KEGG: gau:GAU_2840 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II; PRIAM: 8-amino-7-oxononanoate synthase; SPTR: 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; 8-amino-7-oxononanoate synthase complement(1620408..1621616) Isosphaera pallida ATCC 43644 10155238 YP_004178263.1 CDS Isop_1126 NC_014962.1 1621617 1622813 R COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR014030: IPR014031; KEGG: tro:trd_A0447 beta-ketoacyl-acyl-carrier-protein synthase II; PFAM: Beta-ketoacyl synthase; SPTR: Putative uncharacterized protein; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; beta-ketoacyl synthase complement(1621617..1622813) Isosphaera pallida ATCC 43644 10155239 YP_004178264.1 CDS Isop_1127 NC_014962.1 1622872 1623915 R COGs: COG0502 Biotin synthase; InterPro IPR006638: IPR002684: IPR007197: IPR010722; KEGG: sli:Slin_2405 biotin synthase; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; PRIAM: Biotin synthase; SMART: Elongator protein 3/MiaB/NifB; SPTR: Biotin synthase; TIGRFAM: biotin synthase; PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthetase; biotin synthase complement(1622872..1623915) Isosphaera pallida ATCC 43644 10155240 YP_004178265.1 CDS Isop_1128 NC_014962.1 1624029 1624229 R KEGG: mth:MTH1810 hypothetical protein; hypothetical protein complement(1624029..1624229) Isosphaera pallida ATCC 43644 10155241 YP_004178266.1 CDS Isop_1129 NC_014962.1 1624226 1625071 R KEGG: plm:Plim_3503 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1624226..1625071) Isosphaera pallida ATCC 43644 10155242 YP_004178267.1 CDS Isop_1130 NC_014962.1 1625252 1625734 R InterPro IPR005358; KEGG: plm:Plim_3260 hypothetical protein; PFAM: protein of unknown function UPF0153; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0153); hypothetical protein complement(1625252..1625734) Isosphaera pallida ATCC 43644 10155243 YP_004178268.1 CDS Isop_1131 NC_014962.1 1625780 1626649 R COGs: COG0646 Methionine synthase I (cobalamin-dependent) methyltransferase domain; InterPro IPR003726; KEGG: ade:Adeh_1778 homocysteine S-methyltransferase; PFAM: homocysteine S-methyltransferase; SPTR: Homocysteine S-methyltransferase; PFAM: Homocysteine S-methyltransferase; homocysteine S-methyltransferase complement(1625780..1626649) Isosphaera pallida ATCC 43644 10155244 YP_004178269.1 CDS Isop_1132 NC_014962.1 1626642 1627883 R InterPro IPR008915; KEGG: sno:Snov_3348 peptidase M50; PFAM: peptidase M50; SPTR: Putative uncharacterized protein; manually curated; PFAM: Peptidase family M50; peptidase M50 complement(1626642..1627883) Isosphaera pallida ATCC 43644 10155245 YP_004178270.1 CDS Isop_1133 NC_014962.1 1628181 1628552 D COGs: COG2154 Pterin-4a-carbinolamine dehydratase; InterPro IPR001533; KEGG: plm:Plim_4232 transcriptional coactivator/pterin dehydratase; PFAM: transcriptional coactivator/pterin dehydratase; SPTR: Probable pterin-4-alpha-carbinolamine dehydratase; PFAM: Pterin 4 alpha carbinolamine dehydratase; pterin-4-alpha-carbinolamine dehydratase 1628181..1628552 Isosphaera pallida ATCC 43644 10155246 YP_004178271.1 CDS Isop_1135 NC_014962.1 1629077 1630126 R COGs: COG0009 Putative translation factor (SUA5); InterPro IPR006070: IPR004388: IPR010923: IPR005145; KEGG: aba:Acid345_4092 translation factor SUA5; PFAM: SUA5/yciO/yrdC domain; SUA5 domain-containing protein; SPTR: Sua5/YciO/YrdC/YwlC; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: yrdC domain; SUA5 domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; Sua5/YciO/YrdC/YwlC family protein complement(1629077..1630126) Isosphaera pallida ATCC 43644 10155248 YP_004178272.1 CDS Isop_1136 NC_014962.1 1630156 1631526 R COGs: COG0415 Deoxyribodipyrimidine photolyase; InterPro IPR005101; KEGG: rca:Rcas_4249 deoxyribodipyrimidine photolyase-like protein; PFAM: DNA photolyase FAD-binding; SPTR: Probable deoxyribodipyrimidine photolyase; PFAM: FAD binding domain of DNA photolyase; DNA photolyase FAD-binding protein complement(1630156..1631526) Isosphaera pallida ATCC 43644 10155249 YP_004178273.1 CDS Isop_1137 NC_014962.1 1631527 1633080 R COGs: COG3046 Uncharacterized protein related to deoxyribodipyrimidine photolyase; InterPro IPR007357: IPR005101; KEGG: rrs:RoseRS_0009 deoxyribodipyrimidine photolyase-related protein; PFAM: deoxyribodipyrimidine photolyase-related protein; DNA photolyase FAD-binding; SPTR: Deoxyribodipyrimidine photolyase-related protein; PFAM: FAD binding domain of DNA photolyase; Deoxyribodipyrimidine photo-lyase-related protein; deoxyribodipyrimidine photolyase-like protein complement(1631527..1633080) Isosphaera pallida ATCC 43644 10155250 YP_004178274.1 CDS Isop_1138 NC_014962.1 1633539 1634366 D InterPro IPR000182; KEGG: rer:RER_23190 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; N-acetyltransferase GCN5 1633539..1634366 Isosphaera pallida ATCC 43644 10155251 YP_004178275.1 CDS Isop_1139 NC_014962.1 1634593 1635378 R COGs: COG0846 NAD-dependent protein deacetylase SIR2 family; InterPro IPR003000; KEGG: scl:sce7444 NAD-dependent deacetylase; PFAM: Silent information regulator protein Sir2; SPTR: Transcriptional regulatory protein, Sir2 family; manually curated; PFAM: Sir2 family; silent information regulator protein Sir2 complement(1634593..1635378) Isosphaera pallida ATCC 43644 10155252 YP_004178276.1 CDS Isop_1140 NC_014962.1 1635523 1636791 R KEGG: scb:SCAB_17871 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1635523..1636791) Isosphaera pallida ATCC 43644 10155253 YP_004178277.1 CDS Isop_1141 NC_014962.1 1637367 1638845 D COGs: COG0165 Argininosuccinate lyase; InterPro IPR009049: IPR000362: IPR003031: IPR020557; KEGG: psl:Psta_0383 argininosuccinate lyase; PFAM: fumarate lyase; SPTR: Argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; manually curated; PFAM: Lyase; TIGRFAM: argininosuccinate lyase; argininosuccinate lyase 1637367..1638845 Isosphaera pallida ATCC 43644 10155254 YP_004178278.1 CDS Isop_1142 NC_014962.1 1638981 1640399 D COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR002986: IPR000183; KEGG: plm:Plim_1775 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; SPTR: Diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase; diaminopimelate decarboxylase 1638981..1640399 Isosphaera pallida ATCC 43644 10155255 YP_004178279.1 CDS Isop_1143 NC_014962.1 1640445 1640645 R SPTR: IP09468p; hypothetical protein complement(1640445..1640645) Isosphaera pallida ATCC 43644 10155256 YP_004178280.1 CDS Isop_1144 NC_014962.1 1640841 1643405 D InterPro IPR004155; KEGG: plm:Plim_1773 hypothetical protein; PFAM: PBS lyase HEAT domain protein repeat-containing protein; SPTR: LigA; PBS lyase HEAT domain-containing protein 1640841..1643405 Isosphaera pallida ATCC 43644 10155257 YP_004178281.1 CDS Isop_1145 NC_014962.1 1643409 1644629 D COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR003593: IPR002078: IPR002197; KEGG: psl:Psta_0385 sigma54 specific transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; SPTR: Acetoacetate metabolism regulatory protein atoC; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; Fis family sigma-54 specific transcriptional regulator 1643409..1644629 Isosphaera pallida ATCC 43644 10155258 YP_004178282.1 CDS Isop_1146 NC_014962.1 1644659 1644883 D KEGG: bfr:BF0490 D-alanyl-alanine synthetase A; hypothetical protein 1644659..1644883 Isosphaera pallida ATCC 43644 10155259 YP_004178283.1 CDS Isop_1147 NC_014962.1 1644809 1646698 R COGs: COG3104 Dipeptide/tripeptide permease; InterPro IPR005279: IPR000109: IPR018456; KEGG: xal:XALc_Yp01 hypothetical amino acid/peptide transporter protein; PFAM: TGF-beta receptor type I/II extracellular region; SPTR: Di-/tripeptide transporter; TIGRFAM: amino acid/peptide transporter; PFAM: POT family; TIGRFAM: amino acid/peptide transporter (Peptide:H+ symporter), bacterial; amino acid/peptide transporter complement(1644809..1646698) Isosphaera pallida ATCC 43644 10155260 YP_004178284.1 CDS Isop_1148 NC_014962.1 1647219 1649006 R KEGG: psl:Psta_0548 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1647219..1649006) Isosphaera pallida ATCC 43644 10155261 YP_004178285.1 CDS Isop_1149 NC_014962.1 1649003 1649743 R COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: plm:Plim_1311 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase complement(1649003..1649743) Isosphaera pallida ATCC 43644 10155262 YP_004178286.1 CDS Isop_1150 NC_014962.1 1649972 1650640 R InterPro IPR001387: IPR013096; KEGG: plm:Plim_2075 helix-turn-helix domain protein; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; SPTR: DNA-binding protein; PFAM: Cupin domain; Helix-turn-helix; helix-turn-helix domain-containing protein complement(1649972..1650640) Isosphaera pallida ATCC 43644 10155263 YP_004178287.1 CDS Isop_1151 NC_014962.1 1650874 1651899 D COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase; InterPro IPR004627: IPR013154: IPR013149: IPR002328; KEGG: plm:Plim_2076 L-threonine 3-dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; SPTR: L-threonine 3-dehydrogenase; TIGRFAM: L-threonine 3-dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: L-threonine 3-dehydrogenase; 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase; L-threonine 3-dehydrogenase 1650874..1651899 Isosphaera pallida ATCC 43644 10155264 YP_004178288.1 CDS Isop_1152 NC_014962.1 1652033 1653247 D COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR011282: IPR004839: IPR001917; KEGG: plm:Plim_2077 2-amino-3-ketobutyrate coenzyme A ligase; PFAM: aminotransferase class I and II; PRIAM: Glycine C-acetyltransferase; SPTR: 2-amino-3-ketobutyrate coenzyme A ligase; TIGRFAM: 2-amino-3-ketobutyrate coenzyme A ligase; PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; 2-amino-3-ketobutyrate coenzyme A ligase; 2-amino-3-ketobutyrate coenzyme A ligase 1652033..1653247 Isosphaera pallida ATCC 43644 10155265 YP_004178289.1 CDS Isop_1153 NC_014962.1 1653464 1655101 R COGs: COG0642 Signal transduction histidine kinase; InterProIPR001789: IPR003661: IPR003594: IPR005467: IPR 004358; KEGG: dsa:Desal_1726 Hpt sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SPTR: Hpt sensor hybrid histidine kinase; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; response regulator receiver sensor signal transduction histidine kinase complement(1653464..1655101) Isosphaera pallida ATCC 43644 10155266 YP_004178290.1 CDS Isop_1154 NC_014962.1 1655098 1659264 R COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterProIPR003018: IPR000014: IPR001610: IPR003594: IPR 016132: IPR005467: IPR000700: IPR013515: IPR013767: IPR013655:I PR013656: IPR011495: IPR001294; KEGG: rpe:RPE_1343 putative PAS/PAC sensor protein; PFAM: GAF domain protein; Phytochrome central region domain protein; PAS fold domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; histidine kinase dimerisation/phosphoacceptor; ATP-binding region ATPase domain protein; SMART: GAF domain protein; PAS domain containing protein; PAC repeat-containing protein; ATP-binding region ATPase domain protein; SPTR: Putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase; GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Phytochrome region; PAS fold; TIGRFAM: PAS domain S-box; multi-sensor signal transduction histidine kinase complement(1655098..1659264) Isosphaera pallida ATCC 43644 10155267 YP_004178291.1 CDS Isop_1155 NC_014962.1 1659731 1660714 D COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593: IPR003439: IPR017871; KEGG: csa:Csal_1351 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter; ABC transporter-like protein 1659731..1660714 Isosphaera pallida ATCC 43644 10155268 YP_004178292.1 CDS Isop_1156 NC_014962.1 1660824 1661597 D InterPro IPR000412: IPR013525: IPR013526; KEGG: maq:Maqu_1098 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter; PFAM: ABC-2 type transporter; ABC-2 type transporter 1660824..1661597 Isosphaera pallida ATCC 43644 10155269 YP_004178293.1 CDS Isop_1157 NC_014962.1 1661912 1665340 D InterPro IPR011444; KEGG: rba:RB4803 signal peptide; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553); hypothetical protein 1661912..1665340 Isosphaera pallida ATCC 43644 10155270 YP_004178294.1 CDS Isop_1158 NC_014962.1 1665389 1666906 D InterPro IPR017909: IPR006311: IPR010869; KEGG: psl:Psta_0183 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501); TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; hypothetical protein 1665389..1666906 Isosphaera pallida ATCC 43644 10155271 YP_004178295.1 CDS Isop_1159 NC_014962.1 1667235 1667951 R COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: dge:Dgeo_0058 ubiquinone/menaquinone biosynthesis methyltransferases; PFAM: Methyltransferase type 11; SPTR: Putative methyltransferase; PFAM: Methyltransferase domain; type 11 methyltransferase complement(1667235..1667951) Isosphaera pallida ATCC 43644 10155272 YP_004178296.1 CDS Isop_1160 NC_014962.1 1668079 1670037 R COGs: COG5010 Flp pilus assembly protein TadD contains TPR repeats; InterPro IPR019734: IPR013026: IPR001440; KEGG: azl:AZL_f01560 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: TPR repeat-containing protein; PFAM: Tetratricopeptide repeat; hypothetical protein complement(1668079..1670037) Isosphaera pallida ATCC 43644 10155273 YP_004178297.1 CDS Isop_1161 NC_014962.1 1670041 1672731 R COGs: COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); InterProIPR013840: IPR003583: IPR001357: IPR001679: IPR 013839: IPR004150: IPR000445: IPR018239; KEGG: psl:Psta_2044 DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; NAD-dependent DNA ligase OB-fold; helix-hairpin-helix motif; BRCT domain protein; SMART: NAD-dependent DNA ligase; Helix-hairpin-helix DNA-binding class 1; BRCT domain protein; SPTR: DNA ligase; TIGRFAM: DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; BRCA1 C Terminus (BRCT) domain; Helix-hairpin-helix motif; TIGRFAM: DNA ligase, NAD-dependent; NAD-dependent DNA ligase complement(1670041..1672731) Isosphaera pallida ATCC 43644 10155274 YP_004178298.1 CDS Isop_1162 NC_014962.1 1672867 1674174 R COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: nde:NIDE2987 putative glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyltransferase; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase complement(1672867..1674174) Isosphaera pallida ATCC 43644 10155275 YP_004178299.1 CDS Isop_1163 NC_014962.1 1674327 1678241 D COGs: COG0438 Glycosyltransferase; InterPro IPR006589: IPR001296: IPR006047; KEGG: tro:trd_1930 possible glycanase or glycogenase with amylase domain; PFAM: glycosyl transferase group 1; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Possible glycanase or glycogenase with amylase domain; PFAM: Glycosyl transferases group 1; Alpha amylase, catalytic domain; Domain of unknown function (DUF3416); group 1 glycosyl transferase 1674327..1678241 Isosphaera pallida ATCC 43644 10155276 YP_004178300.1 CDS Isop_1164 NC_014962.1 1678481 1679353 D COGs: COG1427 periplasmic solute-binding protein; InterPro IPR003773; KEGG: psl:Psta_0154 protein of unknown function DUF178; PFAM: protein of unknown function DUF178; SPTR: Putative uncharacterized protein; PFAM: Putative periplasminc binding protein (DUF178); hypothetical protein 1678481..1679353 Isosphaera pallida ATCC 43644 10155277 YP_004178301.1 CDS Isop_1165 NC_014962.1 1679304 1680449 D COGs: COG1060 Thiamine biosynthesis protein ThiH; InterPro IPR020050: IPR005244: IPR007197; KEGG: plm:Plim_2811 radical SAM domain protein; PFAM: Radical SAM domain protein; SPTR: Radical SAM domain protein; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM domain protein, CofH subfamily; menaquinone biosynthesis protein, SCO4550 family; radical SAM protein 1679304..1680449 Isosphaera pallida ATCC 43644 10155278 YP_004178302.1 CDS Isop_1166 NC_014962.1 1680654 1681337 D COGs: COG0412 Dienelactone hydrolase; KEGG: dar:Daro_3231 dienelactone hydrolase; PRIAM: Carboxymethylenebutenolidase; SPTR: Dienelactone hydrolase; PFAM: Dienelactone hydrolase family; carboxymethylenebutenolidase 1680654..1681337 Isosphaera pallida ATCC 43644 10155279 YP_004178303.1 CDS Isop_1167 NC_014962.1 1681495 1681863 D KEGG: nfa:nfa19400 ornithine carbamoyltransferase; SPTR: Ornithine carbamoyltransferase; hypothetical protein 1681495..1681863 Isosphaera pallida ATCC 43644 10155280 YP_004178304.1 CDS Isop_1168 NC_014962.1 1682098 1682742 D InterPro IPR006342; KEGG: rru:Rru_A3719 methyltransferase FkbM; SPTR: Genome sequencing data, contig C315; TIGRFAM: methyltransferase FkbM family; TIGRFAM: methyltransferase, FkbM family; FkbM family methyltransferase 1682098..1682742 Isosphaera pallida ATCC 43644 10155281 YP_004178305.1 CDS Isop_1169 NC_014962.1 1682809 1683603 D COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: acp:A2cp1_2280 enoyl-CoA hydratase/isomerase; PFAM: Enoyl-CoA hydratase/isomerase; SPTR: 3-hydroxybutyryl-CoA dehydratase; PFAM: Enoyl-CoA hydratase/isomerase family; Enoyl-CoA hydratase/isomerase 1682809..1683603 Isosphaera pallida ATCC 43644 10155282 YP_004178306.1 CDS Isop_1170 NC_014962.1 1683710 1684189 R KEGG: rba:RB4919 signal peptide; SPTR: Putative uncharacterized protein; PFAM: DsrE/DsrF-like family; hypothetical protein complement(1683710..1684189) Isosphaera pallida ATCC 43644 10155283 YP_004178307.1 CDS Isop_1171 NC_014962.1 1684571 1686715 D COGs: COG0021 Transketolase; InterProIPR005478: IPR005474: IPR005475: IPR005476: IPR 020826; KEGG: mea:Mex_1p1861 transketolase; PFAM: Transketolase domain-containing protein; Transketolase central region; SPTR: Transketolase; TIGRFAM: transketolase; PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast; transketolase 1684571..1686715 Isosphaera pallida ATCC 43644 10155284 YP_004178308.1 CDS Isop_1172 NC_014962.1 1686853 1688175 R COGs: COG0402 Cytosine deaminase and related metal-dependent hydrolase; InterPro IPR006680; KEGG: rba:RB8208 chlorohydrolase; PFAM: amidohydrolase; SPTR: Probable chlorohydrolase; PFAM: Amidohydrolase family; amidohydrolase complement(1686853..1688175) Isosphaera pallida ATCC 43644 10155285 YP_004178309.1 CDS Isop_1173 NC_014962.1 1688535 1689083 D COGs: COG1678 Putative transcriptional regulator protein; InterPro IPR003774; KEGG: psl:Psta_3870 protein of unknown function DUF179; PFAM: protein of unknown function DUF179; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized ACR, COG1678; hypothetical protein 1688535..1689083 Isosphaera pallida ATCC 43644 10155286 YP_004178310.1 CDS Isop_1174 NC_014962.1 1689193 1690407 R COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466: IPR001586; KEGG: srm:SRM_02930 beta-lactamase; PFAM: beta-lactamase; SPTR: Beta-lactamase; PFAM: Beta-lactamase; beta-lactamase complement(1689193..1690407) Isosphaera pallida ATCC 43644 10155287 YP_004178311.1 CDS Isop_1175 NC_014962.1 1690649 1691416 D KEGG: tra:Trad_0396 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1690649..1691416 Isosphaera pallida ATCC 43644 10155288 YP_004178312.1 CDS Isop_1176 NC_014962.1 1691490 1692407 D COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR001544; KEGG: ppp:PHYPADRAFT_141539 hypothetical protein; PFAM: aminotransferase class IV; SPTR: Putative branched chain amino acid aminotransferase; PFAM: Aminotransferase class IV; class IV aminotransferase 1691490..1692407 Isosphaera pallida ATCC 43644 10155289 YP_004178313.1 CDS Isop_1177 NC_014962.1 1692610 1693488 D InterPro IPR013424: IPR011449; KEGG: mno:Mnod_0484 glycerophosphoryl diester phosphodiesterase; PFAM: protein of unknown function DUF1555; SPTR: Glycerophosphoryl diester phosphodiesterase; TIGRFAM: PEP-CTERM putative exosortase interaction domain; hypothetical protein 1692610..1693488 Isosphaera pallida ATCC 43644 10155290 YP_004178314.1 CDS Isop_1178 NC_014962.1 1693638 1696112 R COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: rba:RB183 putative outer membrane protein; PFAM: outer membrane efflux protein; SPTR: Putative uncharacterized protein; PFAM: Outer membrane efflux protein; outer membrane efflux protein complement(1693638..1696112) Isosphaera pallida ATCC 43644 10155291 YP_004178315.1 CDS Isop_1179 NC_014962.1 1696109 1696375 R hypothetical protein complement(1696109..1696375) Isosphaera pallida ATCC 43644 10155292 YP_004178316.1 CDS Isop_1180 NC_014962.1 1696449 1697939 D COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR000644: IPR002550: IPR005170; KEGG: swo:Swol_1763 hypothetical protein; PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SPTR: Putative uncharacterized protein; PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; hypothetical protein 1696449..1697939 Isosphaera pallida ATCC 43644 10155293 YP_004178317.1 CDS Isop_1181 NC_014962.1 1698029 1698700 R COGs: COG1716 FOG: FHA domain; InterPro IPR000253: IPR018247; KEGG: plm:Plim_0878 forkhead-associated protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: Forkhead-associated protein; PFAM: FHA domain; FHA domain-containing protein complement(1698029..1698700) Isosphaera pallida ATCC 43644 10155294 YP_004178318.1 CDS Isop_1182 NC_014962.1 1699332 1701116 D COGs: COG0539 Ribosomal protein S1; InterPro IPR003029: IPR000110; KEGG: plm:Plim_1620 ribosomal protein S1; PFAM: RNA binding S1 domain protein; SPTR: Ribosomal protein S1; PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1; 30S ribosomal protein S1 1699332..1701116 Isosphaera pallida ATCC 43644 10155295 YP_004178319.1 CDS Isop_1183 NC_014962.1 1701219 1701938 R COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: psl:Psta_3458 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: Methyltransferase domain; type 11 methyltransferase complement(1701219..1701938) Isosphaera pallida ATCC 43644 10155296 YP_004178320.1 CDS Isop_1185 NC_014962.1 1703103 1703573 R COGs: COG0049 Ribosomal protein S7; InterPro IPR005717: IPR000235: IPR020606; KEGG: psl:Psta_2548 ribosomal protein S7; PFAM: ribosomal protein S7; SPTR: 30S ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle; 30S ribosomal protein S7 complement(1703103..1703573) Isosphaera pallida ATCC 43644 10155298 YP_004178321.1 CDS Isop_1186 NC_014962.1 1703818 1704225 R COGs: COG0048 Ribosomal protein S12; InterPro IPR005679: IPR006032; KEGG: hau:Haur_3275 30S ribosomal protein S12; PFAM: ribosomal protein S12/S23; SPTR: 30S ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle; 30S ribosomal protein S12 complement(1703818..1704225) Isosphaera pallida ATCC 43644 10155299 YP_004178322.1 CDS Isop_1187 NC_014962.1 1704405 1705487 R COGs: COG0825 Acetyl-CoA carboxylase alpha subunit; InterPro IPR011763: IPR001095: IPR020582; KEGG: psl:Psta_4222 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region; PRIAM: Acetyl-CoA carboxylase; SPTR: Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; acetyl-CoA carboxylase carboxyltransferase subunit alpha complement(1704405..1705487) Isosphaera pallida ATCC 43644 10155300 YP_004178323.1 CDS Isop_1188 NC_014962.1 1705782 1706666 R COGs: COG0515 Serine/threonine protein kinase; InterPro IPR020635: IPR002290: IPR000719: IPR017442; KEGG: psl:Psta_4221 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Probable protein kinase yloP; PFAM: Protein kinase domain; serine/threonine protein kinase complement(1705782..1706666) Isosphaera pallida ATCC 43644 10155301 YP_004178324.1 CDS Isop_1189 NC_014962.1 1707221 1709743 D COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR003593: IPR002543: IPR018541; KEGG: psl:Psta_2807 cell divisionFtsK/SpoIIIE; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: AAA ATPase; SPTR: Cell divisionFtsK/SpoIIIE; PFAM: Ftsk gamma domain; FtsK/SpoIIIE family; cell division protein FtsK 1707221..1709743 Isosphaera pallida ATCC 43644 10155302 YP_004178325.1 CDS Isop_1190 NC_014962.1 1709985 1711202 R InterPro IPR019734: IPR001440; KEGG: pca:Pcar_1872 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: TPR repeat protein; hypothetical protein complement(1709985..1711202) Isosphaera pallida ATCC 43644 10155303 YP_004178326.1 CDS Isop_1191 NC_014962.1 1711199 1713139 R InterPro IPR013517: IPR011519; KEGG: sus:Acid_1964 ASPIC/UnbV domain-containing protein; PFAM: ASPIC/UnbV domain protein; FG-GAP repeat protein; SPTR: ASPIC/UnbV domain protein; PFAM: ASPIC and UnbV; ASPIC/UnbV domain-containing protein complement(1711199..1713139) Isosphaera pallida ATCC 43644 10155304 YP_004178327.1 CDS Isop_1192 NC_014962.1 1713300 1714733 R COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR001789: IPR003593: IPR002078: IPR002197: IPR 020441; KEGG: plm:Plim_2084 sigma-54 factor interaction domain-containing protein; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: Sigma-54 factor interaction domain-containing protein; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; Fis family sigma-54 specific transcriptional regulator complement(1713300..1714733) Isosphaera pallida ATCC 43644 10155305 YP_004178328.1 CDS Isop_1193 NC_014962.1 1714833 1716584 R COGs: COG0642 Signal transduction histidine kinase; InterProIPR003660: IPR003661: IPR003594: IPR005467: IPR 004358; KEGG: psl:Psta_0490 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SPTR: Histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase complement(1714833..1716584) Isosphaera pallida ATCC 43644 10155306 YP_004178329.1 CDS Isop_1194 NC_014962.1 1716811 1717257 R KEGG: mfa:Mfla_1237 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1716811..1717257) Isosphaera pallida ATCC 43644 10155307 YP_004178330.1 CDS Isop_1195 NC_014962.1 1717424 1718608 R KEGG: psl:Psta_1651 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Dienelactone hydrolase family; hypothetical protein complement(1717424..1718608) Isosphaera pallida ATCC 43644 10155308 YP_004178331.1 CDS Isop_1196 NC_014962.1 1718770 1721448 D COGs: COG3008 Paraquat-inducible protein B; InterPro IPR007498: IPR003399; KEGG: abo:ABO_2405 PqiB family protein; PFAM: Paraquat-inducible protein A; Mammalian cell entry related domain protein; SPTR: Mce related protein; PFAM: mce related protein; Paraquat-inducible protein A; TIGRFAM: integral membrane protein, PqiA family; Paraquat-inducible protein A 1718770..1721448 Isosphaera pallida ATCC 43644 10155309 YP_004178332.1 CDS Isop_1197 NC_014962.1 1721888 1722211 D KEGG: psl:Psta_4060 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1721888..1722211 Isosphaera pallida ATCC 43644 10155310 YP_004178333.1 CDS Isop_1198 NC_014962.1 1722603 1723907 D COGs: COG0448 ADP-glucose pyrophosphorylase; InterPro IPR011831: IPR005835: IPR005836; KEGG: plm:Plim_1974 glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; SPTR: Glucose-1-phosphate adenylyltransferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; glucose-1-phosphate adenylyltransferase 1722603..1723907 Isosphaera pallida ATCC 43644 10155311 YP_004178334.1 CDS Isop_1199 NC_014962.1 1724480 1725622 D COGs: COG2165 Type II secretory pathway pseudopilin PulG; InterPro IPR012902: IPR001120; KEGG: psl:Psta_2986 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 1724480..1725622 Isosphaera pallida ATCC 43644 10155312 YP_004178335.1 CDS Isop_1200 NC_014962.1 1725792 1726247 D KEGG: psl:Psta_0693 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein 1725792..1726247 Isosphaera pallida ATCC 43644 10155313 YP_004178336.1 CDS Isop_1201 NC_014962.1 1726575 1728827 D COGs: COG1770 Protease II; InterPro IPR004106: IPR002470; KEGG: sus:Acid_3709 oligopeptidase B; PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller; PRIAM: Oligopeptidase B; SPTR: Oligopeptidase B; PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase family; oligopeptidase B 1726575..1728827 Isosphaera pallida ATCC 43644 10155314 YP_004178337.1 CDS Isop_1202 NC_014962.1 1729119 1729763 D KEGG: cfa:485022 KH-type splicing regulatory protein; SPTR: Whole genome shotgun sequence assembly, scaffold_139; hypothetical protein 1729119..1729763 Isosphaera pallida ATCC 43644 10155315 YP_004178338.1 CDS Isop_1203 NC_014962.1 1730340 1731338 D InterPro IPR012902; KEGG: plm:Plim_4084 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 1730340..1731338 Isosphaera pallida ATCC 43644 10155316 YP_004178339.1 CDS Isop_1204 NC_014962.1 1731503 1733029 D KEGG: abo:ABO_1105 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1731503..1733029 Isosphaera pallida ATCC 43644 10155317 YP_004178340.1 CDS Isop_1205 NC_014962.1 1733226 1734239 D InterPro IPR012902; KEGG: plm:Plim_1767 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 1733226..1734239 Isosphaera pallida ATCC 43644 10155318 YP_004178341.1 CDS Isop_1206 NC_014962.1 1734354 1735364 D InterPro IPR012902: IPR001120; KEGG: plm:Plim_4084 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 1734354..1735364 Isosphaera pallida ATCC 43644 10155319 YP_004178342.1 CDS Isop_1207 NC_014962.1 1736013 1737068 D InterPro IPR012902: IPR001120; KEGG: plm:Plim_0377 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 1736013..1737068 Isosphaera pallida ATCC 43644 10155320 YP_004178343.1 CDS Isop_1208 NC_014962.1 1737058 1737324 D KEGG: syp:SYNPCC7002_A0336 ABC-type phosphate/phosphonate transport system periplasmic component; SPTR: Activating transcription factor 6-like protein; hypothetical protein 1737058..1737324 Isosphaera pallida ATCC 43644 10155321 YP_004178344.1 CDS Isop_1209 NC_014962.1 1737348 1737581 D KEGG: rha:RHA1_ro01893 ABC amino acid transporter, periplasmic binding protein; SPTR: ABC amino acid transporter, periplasmic binding protein; hypothetical protein 1737348..1737581 Isosphaera pallida ATCC 43644 10155322 YP_004178345.1 CDS Isop_1210 NC_014962.1 1737743 1741285 R KEGG: aba:Acid345_0515 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: BNR/Asp-box repeat; hypothetical protein complement(1737743..1741285) Isosphaera pallida ATCC 43644 10155323 YP_004178346.1 CDS Isop_1211 NC_014962.1 1741303 1741497 D KEGG: tgo:TGME49_015600 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1741303..1741497 Isosphaera pallida ATCC 43644 10155324 YP_004178347.1 CDS Isop_1212 NC_014962.1 1741677 1742966 D COGs: COG0523 Putative GTPase (G3E family); InterPro IPR003495: IPR011629; KEGG: rme:Rmet_1098 cobalamin synthesis protein P47K; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; SPTR: Cobalamin synthesis protein/P47K; PFAM: Cobalamin synthesis protein cobW C-terminal domain; CobW/HypB/UreG, nucleotide-binding domain; cobalamin synthesis protein P47K 1741677..1742966 Isosphaera pallida ATCC 43644 10155325 YP_004178348.1 CDS Isop_1213 NC_014962.1 1743043 1743867 D InterPro IPR019613; KEGG: abu:Abu_2284 hypothetical protein; PFAM: Nickel transport complex, NikM subunit, transmembrane; SPTR: Putative uncharacterized protein; PFAM: Nickel uptake substrate-specific transmembrane region; nickel transport complex transmembrane protein NikM 1743043..1743867 Isosphaera pallida ATCC 43644 10155326 YP_004178349.1 CDS Isop_1214 NC_014962.1 1744267 1744614 D KEGG: bta:508527 biorientation of chromosomes in cell division 1-like; SPTR: BOD1L protein; hypothetical protein 1744267..1744614 Isosphaera pallida ATCC 43644 10155327 YP_004178350.1 CDS Isop_1215 NC_014962.1 1744856 1745533 R COGs: COG0035 Uracil phosphoribosyltransferase; InterPro IPR005765: IPR000836; KEGG: ttr:Tter_1755 uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; SPTR: Uracil phosphoribosyltransferase; TIGRFAM: uracil phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase; uracil phosphoribosyltransferase complement(1744856..1745533) Isosphaera pallida ATCC 43644 10155328 YP_004178351.1 CDS Isop_1216 NC_014962.1 1745643 1747247 R InterPro IPR000182; KEGG: psl:Psta_0547 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Acetyltransferase (GNAT) family; hypothetical protein complement(1745643..1747247) Isosphaera pallida ATCC 43644 10155329 YP_004178352.1 CDS Isop_1217 NC_014962.1 1747684 1750863 D InterPro IPR011444; KEGG: sus:Acid_0974 hypothetical protein; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553); hypothetical protein 1747684..1750863 Isosphaera pallida ATCC 43644 10155330 YP_004178353.1 CDS Isop_1218 NC_014962.1 1750989 1752491 D InterPro IPR017909: IPR010869; KEGG: psl:Psta_4533 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501); hypothetical protein 1750989..1752491 Isosphaera pallida ATCC 43644 10155331 YP_004178354.1 CDS Isop_1219 NC_014962.1 1752681 1753778 D KEGG: sli:Slin_2951 glycosyl transferase family protein; SPTR: Glycosyl transferase, group 2 family protein; PFAM: Glycosyl transferase family 2; glycosyl transferase family protein 1752681..1753778 Isosphaera pallida ATCC 43644 10155332 YP_004178355.1 CDS Isop_1220 NC_014962.1 1753834 1755054 D InterPro IPR010496; KEGG: rba:RB9196 secreted glycosyl hydrolase; PFAM: protein of unknown function DUF1080; SPTR: Probable secreted glycosyl hydrolase; PFAM: Domain of Unknown Function (DUF1080); hypothetical protein 1753834..1755054 Isosphaera pallida ATCC 43644 10155333 YP_004178356.1 CDS Isop_1221 NC_014962.1 1755201 1756328 R COGs: COG0276 Protoheme ferro-lyase (ferrochelatase); InterPro IPR001015; KEGG: plm:Plim_1905 ferrochelatase; PFAM: ferrochelatase; SPTR: Ferrochelatase; TIGRFAM: ferrochelatase; PFAM: Ferrochelatase; TIGRFAM: ferrochelatase; ferrochelatase complement(1755201..1756328) Isosphaera pallida ATCC 43644 10155334 YP_004178357.1 CDS Isop_1222 NC_014962.1 1756569 1757573 D COGs: COG1984 Allophanate hydrolase subunit 2; InterPro IPR003778; KEGG: mca:MCA0477 allophanate hydrolase, subunit 2; PFAM: Allophanate hydrolase subunit 2; SMART: Allophanate hydrolase subunit 2; SPTR: Allophanate hydrolase, subunit 2; PFAM: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 2 1756569..1757573 Isosphaera pallida ATCC 43644 10155335 YP_004178358.1 CDS Isop_1223 NC_014962.1 1757773 1758300 D COGs: COG0503 Adenine/guanine phosphoribosyltransferase and related PRPP-binding protein; InterPro IPR005764: IPR000836; KEGG: plm:Plim_3653 adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; SPTR: Adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase; adenine phosphoribosyltransferase 1757773..1758300 Isosphaera pallida ATCC 43644 10155336 YP_004178359.1 CDS Isop_1224 NC_014962.1 1758475 1759821 D COGs: COG2814 Arabinose efflux permease; InterPro IPR011701: IPR005829: IPR001958; KEGG: gvi:gll1490 tetracycline resistance protein; PFAM: major facilitator superfamily MFS_1; SPTR: Tetracycline resistance protein; PFAM: Major Facilitator Superfamily; TIGRFAM: Multidrug resistance protein; major facilitator superfamily protein 1758475..1759821 Isosphaera pallida ATCC 43644 10155337 YP_004178360.1 CDS Isop_1225 NC_014962.1 1759897 1761495 R COGs: COG0151 Phosphoribosylamine-glycine ligase; InterProIPR011761: IPR000115: IPR020562: IPR020561: IPR 020560: IPR020559; KEGG: plm:Plim_1777 phosphoribosylamine/glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C-domain; PRIAM: Phosphoribosylamine--glycine ligase; SPTR: Phosphoribosylamine-glycine ligase; TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase; phosphoribosylamine/glycine ligase complement(1759897..1761495) Isosphaera pallida ATCC 43644 10155338 YP_004178361.1 CDS Isop_1226 NC_014962.1 1761661 1763019 R COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: cag:Cagg_2495 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase complement(1761661..1763019) Isosphaera pallida ATCC 43644 10155339 YP_004178362.1 CDS Isop_1227 NC_014962.1 1763016 1764269 R COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sti:Sthe_0904 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase complement(1763016..1764269) Isosphaera pallida ATCC 43644 10155340 YP_004178363.1 CDS Isop_1228 NC_014962.1 1764444 1766498 R KEGG: rca:Rcas_2085 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1764444..1766498) Isosphaera pallida ATCC 43644 10155341 YP_004178364.1 CDS Isop_1229 NC_014962.1 1766809 1767930 R COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: jan:Jann_1467 oxidoreductase-like; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Oxidoreductase-like protein; manually curated; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase domain-containing protein complement(1766809..1767930) Isosphaera pallida ATCC 43644 10155342 YP_004178365.1 CDS Isop_1230 NC_014962.1 1768283 1769173 D COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR005263: IPR002220; KEGG: plm:Plim_1370 dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; SPTR: Dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase; dihydrodipicolinate synthase 1768283..1769173 Isosphaera pallida ATCC 43644 10155343 YP_004178366.1 CDS Isop_1231 NC_014962.1 1769286 1770947 R COGs: COG0591 Na+/proline symporter; InterPro IPR001734: IPR006311; KEGG: phe:Phep_2815 SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; SPTR: Sodium-dependent multivitamin transporter; PFAM: Sodium:solute symporter family; Na+/solute symporter complement(1769286..1770947) Isosphaera pallida ATCC 43644 10155344 YP_004178367.1 CDS Isop_1232 NC_014962.1 1770983 1771471 R COGs: COG3613 Nucleoside 2-deoxyribosyltransferase; InterPro IPR007710; KEGG: mbn:Mboo_2452 nucleoside 2-deoxyribosyltransferase; PFAM: nucleoside 2-deoxyribosyltransferase; SPTR: Nucleoside 2-deoxyribosyltransferase; PFAM: Nucleoside 2-deoxyribosyltransferase; nucleoside 2-deoxyribosyltransferase complement(1770983..1771471) Isosphaera pallida ATCC 43644 10155345 YP_004178368.1 CDS Isop_1233 NC_014962.1 1771782 1772522 D KEGG: cal:CaO19.4334 Proline_Alanine_Serine repeat protein; SPTR: Fe-S oxidoreductase; hypothetical protein 1771782..1772522 Isosphaera pallida ATCC 43644 10155346 YP_004178369.1 CDS Isop_1234 NC_014962.1 1772868 1773683 D KEGG: ame:725726 hypothetical protein LOC725726; SPTR: Histidine-rich jaw structural protein; hypothetical protein 1772868..1773683 Isosphaera pallida ATCC 43644 10155347 YP_004178370.1 CDS Isop_1235 NC_014962.1 1773952 1774677 D KEGG: scl:sce8575 PE-PGRS family protein; SPTR: Whole genome shotgun sequence assembly, scaffold_14; hypothetical protein 1773952..1774677 Isosphaera pallida ATCC 43644 10155348 YP_004178371.1 CDS Isop_1236 NC_014962.1 1774795 1775553 D KEGG: scl:sce9323 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1774795..1775553 Isosphaera pallida ATCC 43644 10155349 YP_004178372.1 CDS Isop_1237 NC_014962.1 1775543 1776784 R COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR017568: IPR014030: IPR014031: IPR018201; KEGG: adg:Adeg_0960 3-oxoacyl-(acyl-carrier-protein) synthase 2; PFAM: Beta-ketoacyl synthase; SPTR: 3-oxoacyl-(Acyl-carrier-protein) synthase 2; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II; 3-oxoacyl-(acyl-carrier-protein) synthase II complement(1775543..1776784) Isosphaera pallida ATCC 43644 10155350 YP_004178373.1 CDS Isop_1238 NC_014962.1 1776929 1778173 R COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR017568: IPR014030: IPR014031: IPR018201; KEGG: plm:Plim_2564 3-oxoacyl-(acyl-carrier-protein) synthase 2; PFAM: Beta-ketoacyl synthase; SPTR: 3-oxoacyl-(Acyl-carrier-protein) synthase 2; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II; 3-oxoacyl-(acyl-carrier-protein) synthase II complement(1776929..1778173) Isosphaera pallida ATCC 43644 10155351 YP_004178374.1 CDS Isop_1239 NC_014962.1 1778343 1778582 R COGs: COG0236 Acyl carrier protein; InterPro IPR009081: IPR003231: IPR006163: IPR006162; KEGG: rba:RB318 acyl carrier protein precursor; PFAM: phosphopantetheine-binding; SPTR: Acyl carrier protein; TIGRFAM: acyl carrier protein; PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein; acyl carrier protein complement(1778343..1778582) Isosphaera pallida ATCC 43644 10155352 YP_004178375.1 CDS Isop_1240 NC_014962.1 1778814 1780355 R COGs: COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase]; InterPro IPR004534: IPR018319; KEGG: hmo:HM1_2507 L-seryl-tRNA selenium transferase; PFAM: Pyridoxal phosphate-dependent transferase; PRIAM: L-seryl-tRNA(Sec) selenium transferase; SPTR: L-seryl-tRNA selenium transferase; TIGRFAM: L-seryl-tRNA selenium transferase; PFAM: L-seryl-tRNA selenium transferase; TIGRFAM: seryl-tRNA(sec) selenium transferase; L-seryl-tRNA selenium transferase complement(1778814..1780355) Isosphaera pallida ATCC 43644 10155353 YP_004178376.1 CDS Isop_1241 NC_014962.1 1780352 1781293 R KEGG: swi:Swit_1745 aldehyde dehydrogenase (acceptor); SPTR: Putative uncharacterized protein; hypothetical protein complement(1780352..1781293) Isosphaera pallida ATCC 43644 10155354 YP_004178377.1 CDS Isop_1242 NC_014962.1 1781405 1782130 D KEGG: psl:Psta_2273 protein of unknown function DUF1588; SPTR: Putative uncharacterized protein; hypothetical protein 1781405..1782130 Isosphaera pallida ATCC 43644 10155355 YP_004178378.1 CDS Isop_1243 NC_014962.1 1782225 1783565 D COGs: COG0673 dehydrogenase and related protein; InterPro IPR017909: IPR006311: IPR000683; KEGG: dfe:Dfer_1237 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase domain-containing protein 1782225..1783565 Isosphaera pallida ATCC 43644 10155356 YP_004178379.1 CDS Isop_1244 NC_014962.1 1783623 1784534 D COGs: COG3622 Hydroxypyruvate isomerase; InterPro IPR006311: IPR012307; KEGG: zpr:ZPR_4222 probable glyoxylate-induced protein; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: Probable glyoxylate-induced protein; PFAM: Xylose isomerase-like TIM barrel; xylose isomerase domain-containing protein 1783623..1784534 Isosphaera pallida ATCC 43644 10155357 YP_004178380.1 CDS Isop_1245 NC_014962.1 1784634 1785098 D InterPro IPR017504; KEGG: rba:RB4470 signal peptide; SPTR: Putative uncharacterized protein; TIGRFAM: Planctomycetes uncharacterized domain TIGR03067; hypothetical protein 1784634..1785098 Isosphaera pallida ATCC 43644 10155358 YP_004178381.1 CDS Isop_1246 NC_014962.1 1785177 1785350 R hypothetical protein complement(1785177..1785350) Isosphaera pallida ATCC 43644 10155359 YP_004178382.1 CDS Isop_1247 NC_014962.1 1785557 1787236 R KEGG: dpo:Dpse_GA11831 GA11831 gene product from transcript GA11831-RA; SPTR: Putative uncharacterized protein; hypothetical protein complement(1785557..1787236) Isosphaera pallida ATCC 43644 10155360 YP_004178383.1 CDS Isop_1248 NC_014962.1 1787505 1790249 R COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterPro IPR005743: IPR002205: IPR006691; KEGG: rba:RB8841 DNA gyrase subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA gyrase/topoisomerase IV subunit A; SPTR: DNA gyrase subunit A; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit; DNA gyrase subunit A complement(1787505..1790249) Isosphaera pallida ATCC 43644 10155361 YP_004178384.1 CDS Isop_1249 NC_014962.1 1790356 1791006 R KEGG: ddr:Deide_06010 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2721); hypothetical protein complement(1790356..1791006) Isosphaera pallida ATCC 43644 10155362 YP_004178385.1 CDS Isop_1250 NC_014962.1 1791174 1792766 R COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: dde:Dde_0462 sulfatase; PFAM: sulfatase; SPTR: Sulfatase, putative; PFAM: Sulfatase; sulfatase complement(1791174..1792766) Isosphaera pallida ATCC 43644 10155363 YP_004178386.1 CDS Isop_1251 NC_014962.1 1792911 1794914 R COGs: COG0531 Amino acid transporter; InterPro IPR006016; KEGG: pcu:pc0262 hypothetical protein; PFAM: UspA domain-containing protein; SPTR: Amino acid permease-associated region; PFAM: Universal stress protein family; UspA domain-containing protein complement(1792911..1794914) Isosphaera pallida ATCC 43644 10155364 YP_004178387.1 CDS Isop_1252 NC_014962.1 1795440 1796813 D COGs: COG0673 dehydrogenase and related protein; InterPro IPR017909: IPR006311: IPR000683; KEGG: plm:Plim_0111 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase domain-containing protein 1795440..1796813 Isosphaera pallida ATCC 43644 10155365 YP_004178388.1 CDS Isop_1253 NC_014962.1 1797015 1799954 R InterProIPR019734: IPR000719: IPR013026: IPR017442: IPR 001440; KEGG: dal:Dalk_5269 TPR repeat-containing protein; PFAM: Serine/threonine-protein kinase-like domain; Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Tetratricopeptide TPR_2 repeat protein; PFAM: Protein kinase domain; Tetratricopeptide repeat; Serine/threonine-protein kinase-like domain-containing protein complement(1797015..1799954) Isosphaera pallida ATCC 43644 10155366 YP_004178389.1 CDS Isop_1254 NC_014962.1 1800015 1800758 R COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017442: IPR008271: IPR020635: IPR 002290; KEGG: rca:Rcas_0525 TPR repeat-containing serine/threonin protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine-protein kinase; PFAM: Protein kinase domain; serine/threonine protein kinase complement(1800015..1800758) Isosphaera pallida ATCC 43644 10155367 YP_004178390.1 CDS Isop_1255 NC_014962.1 1800762 1802855 R COGs: COG0303 Molybdopterin biosynthesis enzyme; InterProIPR020817: IPR005110: IPR001453: IPR005111: IPR 008284; KEGG: met:M446_3276 putative molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV; SPTR: Molybdenum cofactor synthesis domain protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain; molybdopterin molybdochelatase complement(1800762..1802855) Isosphaera pallida ATCC 43644 10155368 YP_004178391.1 CDS Isop_1256 NC_014962.1 1803160 1804911 R COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: tpd:Teth39_1750 amidohydrolase; PFAM: amidohydrolase; SPTR: Amidohydrolase; PFAM: Amidohydrolase family; amidohydrolase complement(1803160..1804911) Isosphaera pallida ATCC 43644 10155369 YP_004178392.1 CDS Isop_1257 NC_014962.1 1804904 1806187 R COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR013108; KEGG: swi:Swit_0080 amidohydrolase 3; PFAM: Amidohydrolase 3; SPTR: Putative uncharacterized protein; PFAM: Amidohydrolase family; amidohydrolase complement(1804904..1806187) Isosphaera pallida ATCC 43644 10155370 YP_004178393.1 CDS Isop_1258 NC_014962.1 1806358 1807659 R COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: dau:Daud_2020 amidohydrolase; PFAM: amidohydrolase; SPTR: Amidohydrolase; PFAM: Amidohydrolase family; amidohydrolase complement(1806358..1807659) Isosphaera pallida ATCC 43644 10155371 YP_004178394.1 CDS Isop_1259 NC_014962.1 1807664 1810498 R COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: rmr:Rmar_1420 amidohydrolase; PFAM: amidohydrolase; SPTR: Amidohydrolase; PFAM: Amidohydrolase family; amidohydrolase complement(1807664..1810498) Isosphaera pallida ATCC 43644 10155372 YP_004178395.1 CDS Isop_1260 NC_014962.1 1810501 1811949 R COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: ami:Amir_0524 amidohydrolase; PFAM: amidohydrolase; SPTR: Amidohydrolase; PFAM: Amidohydrolase family; amidohydrolase complement(1810501..1811949) Isosphaera pallida ATCC 43644 10155373 YP_004178396.1 CDS Isop_1261 NC_014962.1 1811957 1813240 R COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: tte:TTE0530 imidazolonepropionase and related amidohydrolase; PFAM: amidohydrolase; SPTR: Imidazolonepropionase and related amidohydrolases; PFAM: Amidohydrolase family; amidohydrolase complement(1811957..1813240) Isosphaera pallida ATCC 43644 10155374 YP_004178397.1 CDS Isop_1262 NC_014962.1 1813389 1816589 R COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR013108: IPR006680; KEGG: sth:STH1913 putative amidohydrolase; PFAM: Amidohydrolase 3; amidohydrolase; SPTR: Putative amidohydrolase; PFAM: Amidohydrolase family; amidohydrolase complement(1813389..1816589) Isosphaera pallida ATCC 43644 10155375 YP_004178398.1 CDS Isop_1263 NC_014962.1 1816944 1817897 D KEGG: plm:Plim_2865 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1816944..1817897 Isosphaera pallida ATCC 43644 10155376 YP_004178399.1 CDS Isop_1264 NC_014962.1 1817894 1819255 D KEGG: sus:Acid_2874 transmembrane prediction; SPTR: Putative uncharacterized protein; hypothetical protein 1817894..1819255 Isosphaera pallida ATCC 43644 10155377 YP_004178400.1 CDS Isop_1265 NC_014962.1 1819350 1820498 D COGs: COG1466 DNA polymerase III delta subunit; InterPro IPR005790: IPR010372; KEGG: plm:Plim_3591 DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; SPTR: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; DNA polymerase III subunit delta 1819350..1820498 Isosphaera pallida ATCC 43644 10155378 YP_004178401.1 CDS Isop_1266 NC_014962.1 1820510 1822450 R COGs: COG2114 Adenylate cyclase family 3 (some protein contain HAMP domain); InterPro IPR001054; KEGG: pmx:PERMA_0988 adenylate cyclase; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; SPTR: Adenylate cyclase; PFAM: Adenylate and Guanylate cyclase catalytic domain; adenylate/guanylate cyclase complement(1820510..1822450) Isosphaera pallida ATCC 43644 10155379 YP_004178402.1 CDS Isop_1267 NC_014962.1 1822949 1826173 D InterPro IPR009056: IPR013428: IPR013427: IPR003088; KEGG: rba:RB3322 cytochrome c; PFAM: cytochrome c class I; SPTR: Putative uncharacterized protein; TIGRFAM: membrane-bound dehydrogenase domain protein; heme-binding protein; PFAM: Cytochrome c; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type; membrane-bound dehydrogenase domain-containing protein 1822949..1826173 Isosphaera pallida ATCC 43644 10155380 YP_004178403.1 CDS Isop_1268 NC_014962.1 1826241 1826870 D COGs: COG0742 N6-adenine-specific methylase; InterPro IPR004398: IPR002052; KEGG: sfu:Sfum_3033 putative methyltransferase; PFAM: Conserved hypothetical protein CHP00095; SPTR: Putative methyltransferase; TIGRFAM: methyltransferase; manually curated; PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family; methyltransferase 1826241..1826870 Isosphaera pallida ATCC 43644 10155381 YP_004178404.1 CDS Isop_1269 NC_014962.1 1826939 1828354 D COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR002646; KEGG: psl:Psta_2057 tRNA adenylyltransferase; PFAM: Polynucleotide adenylyltransferase region; SPTR: Metal dependent phosphohydrolase; PFAM: Poly A polymerase head domain; TIGRFAM: poly(A) polymerase; polynucleotide adenylyltransferase 1826939..1828354 Isosphaera pallida ATCC 43644 10155382 YP_004178405.1 CDS Isop_1270 NC_014962.1 1828571 1829521 R KEGG: amd:AMED_5754 putative O-methyltransferase; SPTR: Beta-lactamase regulatory protein BlaB; hypothetical protein complement(1828571..1829521) Isosphaera pallida ATCC 43644 10155383 YP_004178406.1 CDS Isop_1271 NC_014962.1 1829968 1830972 R COGs: COG1573 Uracil-DNA glycosylase; InterPro IPR005273: IPR005122; KEGG: aca:ACP_0612 uracil-DNA glycosylase, family 4; PFAM: Uracil-DNA glycosylase superfamily; SPTR: Uracil-DNA glycosylase, family 4; TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4; phage SPO1 DNA polymerase-like protein complement(1829968..1830972) Isosphaera pallida ATCC 43644 10155384 YP_004178407.1 CDS Isop_1272 NC_014962.1 1831084 1832505 R InterPro IPR002018: IPR004155; KEGG: plm:Plim_3568 hypothetical protein; PFAM: PBS lyase HEAT domain protein repeat-containing protein; Carboxylesterase type B; SPTR: Putative uncharacterized protein; PFAM: PBS lyase HEAT-like repeat; PBS lyase HEAT domain-containing protein complement(1831084..1832505) Isosphaera pallida ATCC 43644 10155385 YP_004178408.1 CDS Isop_1273 NC_014962.1 1832608 1833300 R COGs: COG4112 phosphoesterase (MutT family); KEGG: psl:Psta_3526 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: NUDIX domain; hypothetical protein complement(1832608..1833300) Isosphaera pallida ATCC 43644 10155386 YP_004178409.1 CDS Isop_1274 NC_014962.1 1833376 1833663 R KEGG: plm:Plim_1299 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1833376..1833663) Isosphaera pallida ATCC 43644 10155387 YP_004178410.1 CDS Isop_1275 NC_014962.1 1834094 1834672 R KEGG: ppe:PEPE_0573 polysaccharide polymerase; SPTR: Putative uncharacterized protein; hypothetical protein complement(1834094..1834672) Isosphaera pallida ATCC 43644 10155388 YP_004178411.1 CDS Isop_1276 NC_014962.1 1834718 1835473 R KEGG: naz:Aazo_0786 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1834718..1835473) Isosphaera pallida ATCC 43644 10155389 YP_004178412.1 CDS Isop_1277 NC_014962.1 1835495 1836937 R COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: plm:Plim_3949 sulfatase; PFAM: sulfatase; SPTR: Sulfatase; PFAM: Sulfatase; sulfatase complement(1835495..1836937) Isosphaera pallida ATCC 43644 10155390 YP_004178413.1 CDS Isop_1278 NC_014962.1 1837085 1837426 R KEGG: plm:Plim_2804 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF962); hypothetical protein complement(1837085..1837426) Isosphaera pallida ATCC 43644 10155391 YP_004178414.1 CDS Isop_1279 NC_014962.1 1837799 1838884 D COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase; InterPro IPR001804: IPR019818; KEGG: psl:Psta_0983 isocitrate dehydrogenase (NAD(+)); PFAM: isocitrate/isopropylmalate dehydrogenase; PRIAM: Isocitrate dehydrogenase (NADP(+)); SPTR: Isocitrate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NAD-dependent, mitochondrial type; isocitrate dehydrogenase, NADP-dependent, prokaryotic type; isocitrate dehydrogenase (NADP) 1837799..1838884 Isosphaera pallida ATCC 43644 10155392 YP_004178415.1 CDS Isop_1280 NC_014962.1 1839216 1840409 D COGs: COG1663 Tetraacyldisaccharide-1-P 4'-kinase; InterPro IPR003758; KEGG: rba:RB7300 tetraacyldisaccharide 4-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; PRIAM: Tetraacyldisaccharide 4'-kinase; SPTR: Tetraacyldisaccharide 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; tetraacyldisaccharide 4'-kinase 1839216..1840409 Isosphaera pallida ATCC 43644 10155393 YP_004178416.1 CDS Isop_1281 NC_014962.1 1840382 1841659 D COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR011910: IPR002201; KEGG: plm:Plim_0899 lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9; SPTR: ADP-heptose--LPS heptosyltransferase II, putative; TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase II; lipopolysaccharide heptosyltransferase II 1840382..1841659 Isosphaera pallida ATCC 43644 10155394 YP_004178417.1 CDS Isop_1282 NC_014962.1 1841585 1842823 R COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR006097: IPR006096: IPR006095: IPR014362; KEGG: ath:AT5G18170 GDH1 (GLUTAMATE DEHYDROGENASE 1); ATP binding / glutamate dehydrogenase [NAD(P)+]/ oxidoreductase; PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; SPTR: Putative uncharacterized protein; PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; glutamate dehydrogenase complement(1841585..1842823) Isosphaera pallida ATCC 43644 10155395 YP_004178418.1 CDS Isop_1283 NC_014962.1 1842922 1843497 R COGs: COG0319 metal-dependent hydrolase; InterPro IPR002036: IPR020549; KEGG: plm:Plim_2234 protein of unknown function UPF0054; PFAM: protein of unknown function UPF0054; SPTR: Putative metalloprotease Plim_2234; PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family; hypothetical protein complement(1842922..1843497) Isosphaera pallida ATCC 43644 10155396 YP_004178419.1 CDS Isop_1284 NC_014962.1 1843570 1845939 R COGs: COG1480 membrane-associated HD superfamily hydrolase; InterPro IPR006675: IPR006674: IPR003607; KEGG: plm:Plim_2233 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: Putative uncharacterized protein; TIGRFAM: metal dependent phophohydrolase; PFAM: HD domain; 7TM receptor with intracellular HD hydrolase; TIGRFAM: uncharacterized domain HDIG; metal dependent phosphohydrolase complement(1843570..1845939) Isosphaera pallida ATCC 43644 10155397 YP_004178420.1 CDS Isop_1285 NC_014962.1 1845936 1847087 R COGs: COG1702 Phosphate starvation-inducible protein PhoH predicted ATPase; InterPro IPR003714; KEGG: psl:Psta_2532 PhoH family protein; PFAM: PhoH family protein; SPTR: PhoH family protein; PFAM: PhoH-like protein; PhoH family protein complement(1845936..1847087) Isosphaera pallida ATCC 43644 10155398 YP_004178421.1 CDS Isop_1286 NC_014962.1 1847277 1848089 R COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789; KEGG: pla:Plav_1850 multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Multi-sensor hybrid histidine kinase; PFAM: Response regulator receiver domain; response regulator receiver protein complement(1847277..1848089) Isosphaera pallida ATCC 43644 10155399 YP_004178422.1 CDS Isop_1287 NC_014962.1 1848849 1849049 D KEGG: bcv:Bcav_4123 HNH nuclease; hypothetical protein 1848849..1849049 Isosphaera pallida ATCC 43644 10155400 YP_004178423.1 CDS Isop_1288 NC_014962.1 1849373 1850842 D COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590: IPR016160: IPR001261; KEGG: plm:Plim_1868 retinal dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: Retinal dehydrogenase; PFAM: Aldehyde dehydrogenase family; aldehyde dehydrogenase 1849373..1850842 Isosphaera pallida ATCC 43644 10155401 YP_004178424.1 CDS Isop_1289 NC_014962.1 1850910 1851389 R COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: psl:Psta_1920 transcriptional repressor, CopY family; PFAM: Penicillinase repressor; SPTR: Transcriptional repressor, CopY family; PFAM: Penicillinase repressor; CopY family transcriptional repressor complement(1850910..1851389) Isosphaera pallida ATCC 43644 10155402 YP_004178425.1 CDS Isop_1290 NC_014962.1 1851552 1851854 D KEGG: pat:Patl_1507 major facilitator transporter; SPTR: Major facilitator superfamily MFS_1; hypothetical protein 1851552..1851854 Isosphaera pallida ATCC 43644 10155403 YP_004178426.1 CDS Isop_1291 NC_014962.1 1852358 1852609 R KEGG: pfu:PF0725 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1852358..1852609) Isosphaera pallida ATCC 43644 10155404 YP_004178427.1 CDS Isop_1292 NC_014962.1 1853121 1853582 D KEGG: ferrichrome ABC transporter (permease) homolog; SPTR: ABC transporter, membrane spanning protein; hypothetical protein 1853121..1853582 Isosphaera pallida ATCC 43644 10155405 YP_004178428.1 CDS Isop_1293 NC_014962.1 1853943 1856165 D COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; InterPro IPR002130: IPR011506: IPR001343; KEGG: psl:Psta_1955 peptidyl-prolyl cis-trans isomerase cyclophilin type; PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; Planctomycete extracellular domain protein; Hemolysin-type calcium-binding region; SPTR: Peptidyl-prolyl cis-trans isomerase cyclophilin type; PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; cyclophilin type peptidyl-prolyl cis-trans isomerase 1853943..1856165 Isosphaera pallida ATCC 43644 10155406 YP_004178429.1 CDS Isop_1294 NC_014962.1 1856386 1857507 D COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR010197: IPR013341: IPR013342; KEGG: chl:Chy400_0934 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing protein; SPTR: Mandelate racemase/muconate lactonizing protein; TIGRFAM: o-succinylbenzoic acid (OSB) synthetase; PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; TIGRFAM: o-succinylbenzoic acid (OSB) synthetase; O-succinylbenzoate synthase 1856386..1857507 Isosphaera pallida ATCC 43644 10155407 YP_004178430.1 CDS Isop_1295 NC_014962.1 1857640 1858914 R InterPro IPR017909: IPR006311: IPR010869; KEGG: rba:RB12732 hypothetical protein; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501); hypothetical protein complement(1857640..1858914) Isosphaera pallida ATCC 43644 10155408 YP_004178431.1 CDS Isop_1296 NC_014962.1 1859125 1860786 R InterPro IPR011444; KEGG: plm:Plim_0522 protein of unknown function DUF1549; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Protein of unknown function (DUF1553); hypothetical protein complement(1859125..1860786) Isosphaera pallida ATCC 43644 10155409 YP_004178432.1 CDS Isop_1297 NC_014962.1 1860807 1861076 D KEGG: sbi:SORBI_05g025880 hypothetical protein; SPTR: Putative uncharacterized protein Sb05g025880; hypothetical protein 1860807..1861076 Isosphaera pallida ATCC 43644 10155410 YP_004178433.1 CDS Isop_1298 NC_014962.1 1861197 1861769 R KEGG: mse:Msed_0762 SMC domain-containing protein; SPTR: AcrB; hypothetical protein complement(1861197..1861769) Isosphaera pallida ATCC 43644 10155411 YP_004178434.1 CDS Isop_1299 NC_014962.1 1861971 1863605 R KEGG: plm:Plim_0688 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: DNA binding domain, excisionase family; hypothetical protein complement(1861971..1863605) Isosphaera pallida ATCC 43644 10155412 YP_004178435.1 CDS Isop_1300 NC_014962.1 1863792 1864262 R KEGG: psl:Psta_4199 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1863792..1864262) Isosphaera pallida ATCC 43644 10155413 YP_004178436.1 CDS Isop_1301 NC_014962.1 1864451 1864909 D KEGG: cqu:CpipJ_CPIJ010111 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1864451..1864909 Isosphaera pallida ATCC 43644 10155414 YP_004178437.1 CDS Isop_1302 NC_014962.1 1864747 1865187 R InterPro IPR007029: IPR011017; KEGG: rba:RB1174 signal peptide; PFAM: YHS domain-containing protein; SMART: TRASH domain-containing protein; SPTR: Putative uncharacterized protein; PFAM: YHS domain; YHS domain-containing protein complement(1864747..1865187) Isosphaera pallida ATCC 43644 10155415 YP_004178438.1 CDS Isop_1303 NC_014962.1 1865862 1866326 D COGs: COG2193 Bacterioferritin (cytochrome b1); InterPro IPR009040: IPR008331; KEGG: psl:Psta_4002 ferritin Dps family protein; PFAM: Ferritin Dps family protein; SPTR: Putative uncharacterized protein; PFAM: Ferritin-like domain; TIGRFAM: bacterioferritin; ferritin Dps family protein 1865862..1866326 Isosphaera pallida ATCC 43644 10155416 YP_004178439.1 CDS Isop_1304 NC_014962.1 1866563 1866838 R KEGG: pcs:Pc16g05880 Pc16g05880; SPTR: Pc16g05880 protein; hypothetical protein complement(1866563..1866838) Isosphaera pallida ATCC 43644 10155417 YP_004178440.1 CDS Isop_1305 NC_014962.1 1866883 1867158 R KEGG: pcs:Pc16g05880 Pc16g05880; SPTR: Pc16g05880 protein; hypothetical protein complement(1866883..1867158) Isosphaera pallida ATCC 43644 10155418 YP_004178441.1 CDS Isop_1306 NC_014962.1 1867203 1867583 R KEGG: psl:Psta_1622 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1867203..1867583) Isosphaera pallida ATCC 43644 10155419 YP_004178442.1 CDS Isop_1307 NC_014962.1 1867988 1869826 D KEGG: fre:Franean1_6664 FAD dependent oxidoreductase; SPTR: FAD dependent oxidoreductase; hypothetical protein 1867988..1869826 Isosphaera pallida ATCC 43644 10155420 YP_004178443.1 CDS Isop_1308 NC_014962.1 1869838 1871322 D COGs: COG5267 conserved hypothetical protein; InterPro IPR014917; KEGG: bcj:BCAL2009 hypothetical protein; PFAM: protein of unknown function DUF1800; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1800); hypothetical protein 1869838..1871322 Isosphaera pallida ATCC 43644 10155421 YP_004178444.1 CDS Isop_1309 NC_014962.1 1871473 1872759 D COGs: COG4102 conserved hypothetical protein; InterPro IPR017909: IPR006311: IPR010869; KEGG: plm:Plim_4236 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501); TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; hypothetical protein 1871473..1872759 Isosphaera pallida ATCC 43644 10155422 YP_004178445.1 CDS Isop_1310 NC_014962.1 1872947 1873996 R InterPro IPR012902: IPR001120; KEGG: plm:Plim_2547 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein complement(1872947..1873996) Isosphaera pallida ATCC 43644 10155423 YP_004178446.1 CDS Isop_1311 NC_014962.1 1874161 1874358 R KEGG: scl:sce1709 putative secreted proline rich protein; SPTR: Putative secreted proline rich protein; hypothetical protein complement(1874161..1874358) Isosphaera pallida ATCC 43644 10155424 YP_004178447.1 CDS Isop_1312 NC_014962.1 1874704 1875969 D COGs: COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; InterPro IPR017963: IPR001126; KEGG: psl:Psta_3727 DNA-directed DNA polymerase; PFAM: UMUC domain protein DNA-repair protein; PRIAM: DNA-directed DNA polymerase; SPTR: DNA-directed DNA polymerase; PFAM: impB/mucB/samB family; DNA-directed DNA polymerase 1874704..1875969 Isosphaera pallida ATCC 43644 10155425 YP_004178448.1 CDS Isop_1313 NC_014962.1 1876063 1876518 D KEGG: psl:Psta_3728 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1876063..1876518 Isosphaera pallida ATCC 43644 10155426 YP_004178449.1 CDS Isop_1314 NC_014962.1 1876570 1877400 R InterPro IPR009430; KEGG: mxa:MXAN_2772 GvpL/GvpF family gas vesicle protein; PFAM: Gas vesicle synthesis GvpLGvpF; SPTR: Gas vesicle protein, GvpL/GvpF family; PFAM: Gas vesicle synthesis protein GvpL/GvpF; gas vesicle synthesis protein GvpLGvpF complement(1876570..1877400) Isosphaera pallida ATCC 43644 10155427 YP_004178450.1 CDS Isop_1315 NC_014962.1 1877462 1879546 R COGs: COG0705 membrane protein; InterPro IPR002610; KEGG: nmu:Nmul_A2462 rhomboid-like protein; PFAM: Rhomboid family protein; SPTR: Rhomboid family protein; PFAM: Rhomboid family; rhomboid family protein complement(1877462..1879546) Isosphaera pallida ATCC 43644 10155428 YP_004178451.1 CDS Isop_1316 NC_014962.1 1879655 1880284 D InterPro IPR000352; KEGG: plm:Plim_0816 class I peptide chain release factor; PFAM: Class I peptide chain release factor; SPTR: Putative uncharacterized protein; PFAM: RF-1 domain; class I peptide chain release factor 1879655..1880284 Isosphaera pallida ATCC 43644 10155429 YP_004178452.1 CDS Isop_1317 NC_014962.1 1880546 1894843 D InterPro IPR003644: IPR000169: IPR006626; KEGG: hau:Haur_4998 Na-Ca exchanger/integrin-beta4; PFAM: Na-Ca exchanger/integrin-beta4; SMART: Na-Ca exchanger/integrin-beta4; Parallel beta-helix repeat; SPTR: Na-Ca exchanger/integrin-beta4; PFAM: Calx-beta domain; Na-Ca exchanger/integrin-beta4 1880546..1894843 Isosphaera pallida ATCC 43644 10155430 YP_004178453.1 CDS Isop_1318 NC_014962.1 1895246 1896439 D KEGG: rba:RB2412 signal peptide; SPTR: Putative uncharacterized protein; hypothetical protein 1895246..1896439 Isosphaera pallida ATCC 43644 10155431 YP_004178454.1 CDS Isop_1319 NC_014962.1 1896613 1898022 D KEGG: bhy:BHWA1_00453 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1896613..1898022 Isosphaera pallida ATCC 43644 10155432 YP_004178455.1 CDS Isop_1320 NC_014962.1 1898424 1898624 D KEGG: ddc:Dd586_0514 putative capsular polysaccharide biosynthesis protein; SPTR: Putative capsular polysaccharide biosynthesis protein; putative capsular polysaccharide biosynthesis protein 1898424..1898624 Isosphaera pallida ATCC 43644 10155433 YP_004178456.1 CDS Isop_1321 NC_014962.1 1898780 1900363 D COGs: COG5267 conserved hypothetical protein; InterPro IPR014917; KEGG: plm:Plim_4237 protein of unknown function DUF1800; PFAM: protein of unknown function DUF1800; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1800); hypothetical protein 1898780..1900363 Isosphaera pallida ATCC 43644 10155434 YP_004178457.1 CDS Isop_1322 NC_014962.1 1900432 1901679 D COGs: COG4102 conserved hypothetical protein; InterPro IPR010869; KEGG: plm:Plim_4236 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501); hypothetical protein 1900432..1901679 Isosphaera pallida ATCC 43644 10155435 YP_004178458.1 CDS Isop_1323 NC_014962.1 1902031 1902849 D COGs: COG0637 phosphatase/phosphohexomutase; InterPro IPR006402: IPR005834; KEGG: gem:GM21_1179 HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; HAD-superfamily hydrolase 1902031..1902849 Isosphaera pallida ATCC 43644 10155436 YP_004178459.1 CDS Isop_1324 NC_014962.1 1902846 1905707 D InterPro IPR002052: IPR002296; KEGG: cyn:Cyan7425_5355 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Putative RNA methylase family UPF0020; hypothetical protein 1902846..1905707 Isosphaera pallida ATCC 43644 10155437 YP_004178460.1 CDS Isop_1325 NC_014962.1 1905826 1909557 R COGs: COG0587 DNA polymerase III alpha subunit; InterProIPR004805: IPR004013: IPR011708: IPR004365: IPR 003141; KEGG: plm:Plim_1265 DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; PRIAM: DNA-directed DNA polymerase; SMART: phosphoesterase PHP domain protein; SPTR: DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc); DNA polymerase III subunit alpha complement(1905826..1909557) Isosphaera pallida ATCC 43644 10155438 YP_004178461.1 CDS Isop_1326 NC_014962.1 1909856 1911748 R KEGG: gsu:GSU1537 general secretion pathway protein-related protein; SPTR: General secretion pathway protein-related protein; hypothetical protein complement(1909856..1911748) Isosphaera pallida ATCC 43644 10155439 YP_004178462.1 CDS Isop_1327 NC_014962.1 1912333 1913328 D KEGG: tgu:100220437 collagen type III alpha 1; SPTR: Whole genome shotgun sequence assembly, scaffold_15, strain Mel28; hypothetical protein 1912333..1913328 Isosphaera pallida ATCC 43644 10155440 YP_004178463.1 CDS Isop_1328 NC_014962.1 1913484 1915082 D KEGG: ttr:Tter_1099 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1913484..1915082 Isosphaera pallida ATCC 43644 10155441 YP_004178464.1 CDS Isop_1329 NC_014962.1 1915296 1916348 D COGs: COG1045 Serine acetyltransferase; InterPro IPR001451; KEGG: psl:Psta_4420 serine O-acetyltransferase; PRIAM: Serine O-acetyltransferase; SPTR: Serine O-acetyltransferase; TIGRFAM: serine O-acetyltransferase; serine O-acetyltransferase 1915296..1916348 Isosphaera pallida ATCC 43644 10155442 YP_004178465.1 CDS Isop_1330 NC_014962.1 1916639 1917643 D COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307: IPR011418; KEGG: psl:Psta_1535 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase domain-containing protein TIM barrel; AP endonuclease 2 domain protein; SPTR: Xylose isomerase domain protein TIM barrel; PFAM: AP endonuclease family 2 C terminus; Xylose isomerase-like TIM barrel; xylose isomerase domain-containing protein 1916639..1917643 Isosphaera pallida ATCC 43644 10155443 YP_004178466.1 CDS Isop_1331 NC_014962.1 1917810 1918034 D KEGG: gox:GOX0933 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1917810..1918034 Isosphaera pallida ATCC 43644 10155444 YP_004178467.1 CDS Isop_1332 NC_014962.1 1918342 1919490 D COGs: COG1995 Pyridoxal phosphate biosynthesis protein; InterPro IPR005255; KEGG: rxy:Rxyl_2988 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; PRIAM: 4-hydroxythreonine-4-phosphate dehydrogenase; SPTR: 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; 4-hydroxythreonine-4-phosphate dehydrogenase 1918342..1919490 Isosphaera pallida ATCC 43644 10155445 YP_004178468.1 CDS Isop_1333 NC_014962.1 1919513 1919725 R KEGG: pgu:PGUG_01177 hypothetical protein; hypothetical protein complement(1919513..1919725) Isosphaera pallida ATCC 43644 10155446 YP_004178469.1 CDS Isop_1334 NC_014962.1 1919798 1920562 D COGs: COG0406 Fructose-2 6-bisphosphatase; InterPro IPR013078; KEGG: psl:Psta_4229 phosphoglycerate mutase; PFAM: Phosphoglycerate mutase; SPTR: Phosphoglycerate mutase; PFAM: Phosphoglycerate mutase family; phosphoglycerate mutase 1919798..1920562 Isosphaera pallida ATCC 43644 10155447 YP_004178470.1 CDS Isop_1335 NC_014962.1 1920705 1922636 R InterPro IPR001455; KEGG: mar:MAE_49330 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1920705..1922636) Isosphaera pallida ATCC 43644 10155448 YP_004178471.1 CDS Isop_1337 NC_014962.1 1923708 1924820 D COGs: COG1560 Lauroyl/myristoyl acyltransferase; InterPro IPR004960: IPR018124; KEGG: plm:Plim_1862 lipid A biosynthesis acyltransferase; PFAM: lipid A biosynthesis acyltransferase; SPTR: Probable lipid A biosynthesis lauroyl acyltransferase; PFAM: Bacterial lipid A biosynthesis acyltransferase; lipid A biosynthesis acyltransferase 1923708..1924820 Isosphaera pallida ATCC 43644 10155451 YP_004178472.1 CDS Isop_1338 NC_014962.1 1924883 1925893 D COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: rca:Rcas_3889 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: Methyltransferase domain; type 11 methyltransferase 1924883..1925893 Isosphaera pallida ATCC 43644 10155452 YP_004178473.1 CDS Isop_1339 NC_014962.1 1926002 1926559 R KEGG: plm:Plim_0620 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1926002..1926559) Isosphaera pallida ATCC 43644 10155453 YP_004178474.1 CDS Isop_1340 NC_014962.1 1926809 1927105 D KEGG: psl:Psta_4149 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1926809..1927105 Isosphaera pallida ATCC 43644 10155454 YP_004178475.1 CDS Isop_1341 NC_014962.1 1927554 1928195 D InterPro IPR000608; KEGG: psl:Psta_4148 ubiquitin-conjugating protein E2; SPTR: Ubiquitin-conjugating protein E2; PFAM: Ubiquitin-conjugating enzyme; ubiquitin-conjugating protein E2 1927554..1928195 Isosphaera pallida ATCC 43644 10155455 YP_004178476.1 CDS Isop_1342 NC_014962.1 1928231 1929574 D COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR000594; KEGG: psl:Psta_4146 UBA/ThiF-type NAD/FAD binding protein; PFAM: UBA/THIF-type NAD/FAD binding protein; SPTR: UBA/THIF-type NAD/FAD binding protein; PFAM: ThiF family; UBA/THIF-type NAD/FAD-binding protein 1928231..1929574 Isosphaera pallida ATCC 43644 10155456 YP_004178477.1 CDS Isop_1343 NC_014962.1 1929571 1931019 D InterPro IPR000555; KEGG: psl:Psta_4145 Mov34/MPN/PAD-1 family protein; PFAM: Mov34/MPN/PAD-1 family protein; SPTR: Mov34/MPN/PAD-1 family protein; PFAM: Mov34/MPN/PAD-1 family; Mov34/MPN/PAD-1 family protein 1929571..1931019 Isosphaera pallida ATCC 43644 10155457 YP_004178478.1 CDS Isop_1344 NC_014962.1 1931420 1934815 D COGs: COG2409 drug exporter of the RND superfamily; InterPro IPR000731; KEGG: nca:Noca_2163 MmpL domain-containing protein; SPTR: MMPL domain protein; PFAM: MMPL family; hypothetical protein 1931420..1934815 Isosphaera pallida ATCC 43644 10155458 YP_004178479.1 CDS Isop_1345 NC_014962.1 1934812 1936275 D KEGG: cag:Cagg_3648 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1934812..1936275 Isosphaera pallida ATCC 43644 10155459 YP_004178480.1 CDS Isop_1346 NC_014962.1 1936272 1937666 D COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003439: IPR003593; KEGG: bmr:BMI_II322 spermidine/putrescine ABC transporter, ATP-binding protein, putative; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter; ABC transporter-like protein 1936272..1937666 Isosphaera pallida ATCC 43644 10155460 YP_004178481.1 CDS Isop_1347 NC_014962.1 1937663 1939597 D COGs: COG1178 ABC-type Fe3+ transport system permease component; KEGG: ttj:TTHA0716 molybdenum ABC transporter, permease protein; SPTR: Binding-protein-dependent transport systems inner membrane component; hypothetical protein 1937663..1939597 Isosphaera pallida ATCC 43644 10155461 YP_004178482.1 CDS Isop_1348 NC_014962.1 1940028 1943789 D COGs: COG2133 Glucose/sorbosone dehydrogenase; InterProIPR021133: IPR009056: IPR013427: IPR004155: IPR 014795; KEGG: plm:Plim_1957 heme-binding protein; PFAM: protein of unknown function DUF1778; PBS lyase HEAT domain protein repeat-containing protein; SPTR: Putative uncharacterized protein; TIGRFAM: heme-binding protein; PFAM: Cytochrome c; HEAT repeat; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type; heme-binding protein 1940028..1943789 Isosphaera pallida ATCC 43644 10155462 YP_004178483.1 CDS Isop_1349 NC_014962.1 1943888 1944979 D KEGG: psl:Psta_0447 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1943888..1944979 Isosphaera pallida ATCC 43644 10155463 YP_004178484.1 CDS Isop_1350 NC_014962.1 1944984 1945934 D COGs: COG2513 PEP phosphonomutase; InterPro IPR012695: IPR000918: IPR018523; KEGG: psl:Psta_3159 methylisocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; SPTR: Methylisocitrate lyase; TIGRFAM: methylisocitrate lyase; PFAM: Isocitrate lyase family; TIGRFAM: methylisocitrate lyase; methylisocitrate lyase 1944984..1945934 Isosphaera pallida ATCC 43644 10155464 YP_004178485.1 CDS Isop_1351 NC_014962.1 1946090 1947037 D COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR011611; KEGG: psl:Psta_2824 PfkB domain protein; PFAM: PfkB domain protein; SPTR: PfkB domain protein; PFAM: pfkB family carbohydrate kinase; PfkB domain-containing protein 1946090..1947037 Isosphaera pallida ATCC 43644 10155465 YP_004178486.1 CDS Isop_1352 NC_014962.1 1947120 1947986 R COGs: COG0266 Formamidopyrimidine-DNA glycosylase; InterProIPR000214: IPR012319: IPR000191: IPR015886: IPR 015887; KEGG: slp:Slip_1694 formamidopyrimidine-DNA glycosylase; PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; Formamidopyrimidine-DNA glycosylase catalytic domain protein; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SPTR: Putative uncharacterized protein; TIGRFAM: formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg); formamidopyrimidine-DNA glycosylase complement(1947120..1947986) Isosphaera pallida ATCC 43644 10155466 YP_004178487.1 CDS Isop_1353 NC_014962.1 1948439 1949548 D InterPro IPR012902: IPR001120: IPR000983; KEGG: plm:Plim_1767 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 1948439..1949548 Isosphaera pallida ATCC 43644 10155467 YP_004178488.1 CDS Isop_1354 NC_014962.1 1950377 1951126 D COGs: COG0321 Lipoate-protein ligase B; InterPro IPR004143; KEGG: plm:Plim_3383 lipoate-protein ligase B-like protein; PFAM: biotin/lipoate A/B protein ligase; SPTR: Lipoate-protein ligase B; TIGRFAM: lipoate-protein ligase B; biotin/lipoate A/B protein ligase 1950377..1951126 Isosphaera pallida ATCC 43644 10155468 YP_004178489.1 CDS Isop_1355 NC_014962.1 1951095 1952189 D COGs: COG0320 Lipoate synthase; InterPro IPR003698: IPR007197: IPR006638; KEGG: plm:Plim_3382 lipoic acid synthetase; PFAM: Radical SAM domain protein; PRIAM: Lipoyl synthase; SMART: Elongator protein 3/MiaB/NifB; SPTR: Lipoyl synthase; TIGRFAM: lipoic acid synthetase; PFAM: Radical SAM superfamily; TIGRFAM: lipoate synthase; lipoic acid synthetase 1951095..1952189 Isosphaera pallida ATCC 43644 10155469 YP_004178490.1 CDS Isop_1356 NC_014962.1 1952395 1954047 D KEGG: sus:Acid_3388 TPR repeat-containing protein; SPTR: Tetratricopeptide TPR_2 repeat protein; hypothetical protein 1952395..1954047 Isosphaera pallida ATCC 43644 10155470 YP_004178491.1 CDS Isop_1357 NC_014962.1 1954356 1956413 R COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003439: IPR017940: IPR006162; KEGG: cpe:CPE1525 ABC transporter; SPTR: Phospholipid-lipopolysaccharide ABC transporter; hypothetical protein complement(1954356..1956413) Isosphaera pallida ATCC 43644 10155471 YP_004178492.1 CDS Isop_1358 NC_014962.1 1956520 1957344 R KEGG: plm:Plim_0058 putative membrane bound transporter; SPTR: Putative uncharacterized protein; putative membrane bound transporter complement(1956520..1957344) Isosphaera pallida ATCC 43644 10155472 YP_004178493.1 CDS Isop_1359 NC_014962.1 1957623 1959647 R COGs: COG2217 Cation transport ATPase; InterProIPR006416: IPR008250: IPR005834: IPR018303: IPR 001757: IPR000695; KEGG: rba:RB4891 cadmium-transporting ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; PRIAM: Zinc-exporting ATPase; SPTR: Cadmium-transporting ATPase; TIGRFAM: heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; heavy metal translocating P-type ATPase complement(1957623..1959647) Isosphaera pallida ATCC 43644 10155473 YP_004178494.1 CDS Isop_1360 NC_014962.1 1959711 1960607 R COGs: COG0388 amidohydrolase; InterPro IPR003010: IPR001110; KEGG: plm:Plim_2311 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Predicted amidohydrolase; PFAM: Carbon-nitrogen hydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(1959711..1960607) Isosphaera pallida ATCC 43644 10155474 YP_004178495.1 CDS Isop_1361 NC_014962.1 1961015 1963867 D KEGG: syn:slr1959 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1961015..1963867 Isosphaera pallida ATCC 43644 10155475 YP_004178496.1 CDS Isop_1362 NC_014962.1 1964118 1965836 R COGs: COG4145 Na+/panthothenate symporter; InterPro IPR001734: IPR019900; KEGG: psl:Psta_2785 Na+/solute symporter; PFAM: Na+/solute symporter; SPTR: Na+/solute symporter; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; SSS sodium solute transporter superfamily protein complement(1964118..1965836) Isosphaera pallida ATCC 43644 10155476 YP_004178497.1 CDS Isop_1363 NC_014962.1 1965954 1966352 R KEGG: psl:Psta_2784 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1965954..1966352) Isosphaera pallida ATCC 43644 10155477 YP_004178498.1 CDS Isop_1364 NC_014962.1 1966789 1967547 R COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: rba:RB12167 hypothetical protein; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: Putative uncharacterized protein; xylose isomerase domain-containing protein complement(1966789..1967547) Isosphaera pallida ATCC 43644 10155478 YP_004178499.1 CDS Isop_1365 NC_014962.1 1967719 1972269 R KEGG: hsa:203286 ankyrin repeat and sterile alpha motif domain containing 6; SPTR: cDNA FLJ45802 fis, clone NT2RI3001967, highly similar to Ankyrin repeat and SAM domain-containing protein 6; hypothetical protein complement(1967719..1972269) Isosphaera pallida ATCC 43644 10155479 YP_004178500.1 CDS Isop_1366 NC_014962.1 1972287 1972529 R KEGG: ara:Arad_0807 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1972287..1972529) Isosphaera pallida ATCC 43644 10155480 YP_004178501.1 CDS Isop_1367 NC_014962.1 1972570 1973391 R COGs: COG1191 DNA-directed RNA polymerase specialized sigma subunit; InterProIPR014284: IPR012845: IPR007627: IPR007624: IPR 007630: IPR000943; KEGG: psl:Psta_3555 RNA polymerase, sigma 28 subunit, FliA/WhiG; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-28 subunit SigD/FliA/WhiG complement(1972570..1973391) Isosphaera pallida ATCC 43644 10155481 YP_004178502.1 CDS Isop_1368 NC_014962.1 1973873 1975024 R COGs: COG1419 Flagellar GTP-binding protein; KEGG: psl:Psta_3558 GTP-binding signal recognition particle SRP54 G-domain protein; SPTR: GTP-binding signal recognition particle SRP54 G-domain protein; hypothetical protein complement(1973873..1975024) Isosphaera pallida ATCC 43644 10155482 YP_004178503.1 CDS Isop_1369 NC_014962.1 1975141 1977543 R COGs: COG1298 Flagellar biosynthesis pathway component FlhA; InterPro IPR001712; KEGG: plm:Plim_1138 flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; SPTR: Flagella-associated protein; PFAM: FHIPEP family; TIGRFAM: flagellar biosynthesis protein FlhA; type III secretion FHIPEP protein complement(1975141..1977543) Isosphaera pallida ATCC 43644 10155483 YP_004178504.1 CDS Isop_1370 NC_014962.1 1978097 1978771 D COGs: COG1321 Mn-dependent transcriptional regulator protein; InterPro IPR001367: IPR007167; KEGG: psl:Psta_3183 iron (metal) dependent repressor, DtxR family; PFAM: iron dependent repressor; FeoA family protein; SMART: iron dependent repressor; SPTR: Iron (Metal) dependent repressor, DtxR family; PFAM: FeoA domain; Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain; DtxR family iron (metal) dependent repressor 1978097..1978771 Isosphaera pallida ATCC 43644 10155484 YP_004178505.1 CDS Isop_1371 NC_014962.1 1978832 1979113 R COGs: COG2343 conserved hypothetical protein; InterPro IPR007361: IPR010916; KEGG: msl:Msil_3182 protein of unknown function DUF427; PFAM: protein of unknown function DUF427; SPTR: Uncharacterized protein conserved in bacteria; PFAM: Domain of unknown function (DUF427); hypothetical protein complement(1978832..1979113) Isosphaera pallida ATCC 43644 10155485 YP_004178506.1 CDS Isop_1372 NC_014962.1 1979506 1981611 D InterPro IPR019500; KEGG: ote:Oter_0618 hypothetical protein; PFAM: Peptidase S46; SPTR: Putative uncharacterized protein; PFAM: Peptidase S46; dipeptidyl-peptidase 7 1979506..1981611 Isosphaera pallida ATCC 43644 10155486 YP_004178507.1 CDS Isop_1373 NC_014962.1 1982091 1983512 D COGs: COG0697 Permease of the drug/metabolite transporter (DMT) superfamily; InterPro IPR000620; KEGG: scl:sce4294 DMT family permease; PFAM: protein of unknown function DUF6 transmembrane; SPTR: Permease of the drug/metabolite transporter (DMT) superfamily; PFAM: EamA-like transporter family; hypothetical protein 1982091..1983512 Isosphaera pallida ATCC 43644 10155487 YP_004178508.1 CDS Isop_1374 NC_014962.1 1984233 1985528 D COGs: COG0498 Threonine synthase; InterPro IPR004450: IPR001926; KEGG: tye:THEYE_A1678 threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Threonine synthase; TIGRFAM: threonine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase; L-threonine synthase 1984233..1985528 Isosphaera pallida ATCC 43644 10155488 YP_004178509.1 CDS Isop_1375 NC_014962.1 1985700 1985972 D InterPro IPR003749; KEGG: tfu:Tfu_2369 hypothetical protein; PFAM: thiamineS protein; SPTR: Putative uncharacterized protein; manually curated; PFAM: ThiS family; sulfur carrier protein ThiS 1985700..1985972 Isosphaera pallida ATCC 43644 10155489 YP_004178510.1 CDS Isop_1376 NC_014962.1 1986106 1987191 D COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR000594: IPR007901; KEGG: sti:Sthe_0801 UBA/ThiF-type NAD/FAD binding protein; PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; SPTR: Molybdopterin biosynthesis protein MoeB; PFAM: MoeZ/MoeB domain; ThiF family; UBA/THIF-type NAD/FAD-binding protein 1986106..1987191 Isosphaera pallida ATCC 43644 10155490 YP_004178511.1 CDS Isop_1377 NC_014962.1 1987241 1988398 D COGs: COG0520 Selenocysteine lyase; InterPro IPR000192; KEGG: sti:Sthe_0800 cysteine desulfurase family protein; PFAM: aminotransferase class V; SPTR: Similar to selenocysteine lyase; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase family protein; class V aminotransferase 1987241..1988398 Isosphaera pallida ATCC 43644 10155491 YP_004178512.1 CDS Isop_1378 NC_014962.1 1988606 1989721 R KEGG: srm:SRM_02168 conserved hypothetical protein, secreted; SPTR: Putative uncharacterized protein; hypothetical protein complement(1988606..1989721) Isosphaera pallida ATCC 43644 10155492 YP_004178513.1 CDS Isop_1379 NC_014962.1 1990086 1992713 D COGs: COG0308 Aminopeptidase N; InterPro IPR014782; KEGG: mxa:MXAN_0644 M1 family peptidase; PFAM: Peptidase M1 membrane alanine aminopeptidase; SPTR: Peptidase, M1 (Aminopeptidase N) family; PFAM: Peptidase family M1; peptidase M1 membrane alanine aminopeptidase 1990086..1992713 Isosphaera pallida ATCC 43644 10155493 YP_004178514.1 CDS Isop_1380 NC_014962.1 1992716 1994074 D KEGG: rca:Rcas_3850 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Neutral/alkaline non-lysosomal ceramidase; hypothetical protein 1992716..1994074 Isosphaera pallida ATCC 43644 10155494 YP_004178515.1 CDS Isop_1381 NC_014962.1 1994189 1995196 D COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR013154: IPR013149; KEGG: rba:RB11985 quinone oxidoreductase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; SPTR: Quinone oxidoreductase; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein 1994189..1995196 Isosphaera pallida ATCC 43644 10155495 YP_004178516.1 CDS Isop_1382 NC_014962.1 1995661 1996617 D KEGG: tgo:TGME49_078190 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1995661..1996617 Isosphaera pallida ATCC 43644 10155496 YP_004178517.1 CDS Isop_1383 NC_014962.1 1996968 1997597 D COGs: COG0740 Protease subunit of ATP-dependent Clp protease; InterPro IPR001907: IPR018215; KEGG: ote:Oter_2740 endopeptidase Clp; PFAM: peptidase S14 ClpP; PRIAM: Endopeptidase Clp; SPTR: ATP-dependent Clp protease proteolytic subunit; PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; ATP-dependent Clp protease proteolytic subunit ClpP 1996968..1997597 Isosphaera pallida ATCC 43644 10155497 YP_004178518.1 CDS Isop_1384 NC_014962.1 1997734 1998330 D COGs: COG0740 Protease subunit of ATP-dependent Clp protease; InterPro IPR001907: IPR018215; KEGG: plm:Plim_3338 endopeptidase Clp; PFAM: peptidase S14 ClpP; PRIAM: Endopeptidase Clp; SPTR: ATP-dependent Clp protease proteolytic subunit; PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; ATP-dependent Clp protease proteolytic subunit ClpP 1997734..1998330 Isosphaera pallida ATCC 43644 10155498 YP_004178519.1 CDS Isop_1385 NC_014962.1 1998511 1999332 R COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR012838: IPR007197: IPR001989; KEGG: nha:Nham_0890 pyruvate formate-lyase activating; PFAM: Radical SAM domain protein; PRIAM: [Formate-C-acetyltransferase]-activating enzyme; SPTR: Pyruvate formate-lyase activating; TIGRFAM: pyruvate formate-lyase activating enzyme; PFAM: Radical SAM superfamily; TIGRFAM: pyruvate formate-lyase 1-activating enzyme; pyruvate formate-lyase activating enzyme complement(1998511..1999332) Isosphaera pallida ATCC 43644 10155499 YP_004178520.1 CDS Isop_1386 NC_014962.1 1999469 2000383 D COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: mxa:MXAN_2064 carbon-nitrogen family hydrolase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Possible nitrilase; PFAM: Carbon-nitrogen hydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1999469..2000383 Isosphaera pallida ATCC 43644 10155500 YP_004178521.1 CDS Isop_1387 NC_014962.1 2000567 2001910 R KEGG: dpo:Dpse_GA28568 GA28568 gene product from transcript GA28568-RA; SPTR: GA28568; hypothetical protein complement(2000567..2001910) Isosphaera pallida ATCC 43644 10155501 YP_004178522.1 CDS Isop_1388 NC_014962.1 2002439 2004727 R COGs: COG1882 Pyruvate-formate lyase; InterPro IPR001150: IPR005949: IPR004184: IPR019777; KEGG: cya:CYA_0477 formate acetyltransferase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical; PRIAM: Formate C-acetyltransferase; SPTR: Formate acetyltransferase; TIGRFAM: formate acetyltransferase; PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: formate acetyltransferase 1; formate acetyltransferase complement(2002439..2004727) Isosphaera pallida ATCC 43644 10155502 YP_004178523.1 CDS Isop_1389 NC_014962.1 2004947 2005687 R KEGG: acp:A2cp1_0253 Fe-S oxidoreductase; SPTR: Fe-S oxidoreductase; hypothetical protein complement(2004947..2005687) Isosphaera pallida ATCC 43644 10155503 YP_004178524.1 CDS Isop_1390 NC_014962.1 2005684 2006511 R COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284: IPR007627: IPR013249; KEGG: plm:Plim_3007 RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; ECF subfamily RNA polymerase sigma-24 factor complement(2005684..2006511) Isosphaera pallida ATCC 43644 10155504 YP_004178525.1 CDS Isop_1391 NC_014962.1 2006662 2007687 D InterPro IPR000182; KEGG: psl:Psta_4773 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Nourseothricin acetyltransferase-like protein; PFAM: Acetyltransferase (GNAT) family; N-acetyltransferase GCN5 2006662..2007687 Isosphaera pallida ATCC 43644 10155505 YP_004178526.1 CDS Isop_1392 NC_014962.1 2008386 2008634 D KEGG: eli:ELI_05005 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Flp/Fap pilin component; hypothetical protein 2008386..2008634 Isosphaera pallida ATCC 43644 10155506 YP_004178527.1 CDS Isop_1393 NC_014962.1 2008653 2009714 R KEGG: ure:UREG_00791 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2008653..2009714) Isosphaera pallida ATCC 43644 10155507 YP_004178528.1 CDS Isop_1394 NC_014962.1 2009711 2010232 R KEGG: cfa:609399 hypothetical protein LOC609399; SPTR: Putative uncharacterized protein; hypothetical protein complement(2009711..2010232) Isosphaera pallida ATCC 43644 10155508 YP_004178529.1 CDS Isop_1395 NC_014962.1 2010306 2011160 R COGs: COG0566 rRNA methylase; InterPro IPR001537; KEGG: psl:Psta_3353 tRNA/rRNA methyltransferase (SpoU); PFAM: tRNA/rRNA methyltransferase (SpoU); SPTR: tRNA/rRNA methyltransferase (SpoU); PFAM: SpoU rRNA Methylase family; tRNA/rRNA methyltransferase SpoU complement(2010306..2011160) Isosphaera pallida ATCC 43644 10155509 YP_004178530.1 CDS Isop_1396 NC_014962.1 2011219 2014374 R COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467: IPR001789: IPR003661: IPR003594: IPR 004358; KEGG: plm:Plim_1346 PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: PAS sensor protein; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; MASE1; integral membrane sensor hybrid histidine kinase complement(2011219..2014374) Isosphaera pallida ATCC 43644 10155510 YP_004178531.1 CDS Isop_1397 NC_014962.1 2014686 2016329 R COGs: COG2721 Altronate dehydratase; InterPro IPR013974: IPR007392; KEGG: kra:Krad_0582 altronate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; PRIAM: Galactarate dehydratase; SPTR: Altronate dehydratase; PFAM: SAF domain; D-galactarate dehydratase / Altronate hydrolase, C terminus; galactarate dehydratase complement(2014686..2016329) Isosphaera pallida ATCC 43644 10155511 YP_004178532.1 CDS Isop_1398 NC_014962.1 2016748 2016933 D KEGG: mmr:Mmar10_1970 spore coat polysaccharide biosynthesis protein glycosyltransferase-like protein; hypothetical protein 2016748..2016933 Isosphaera pallida ATCC 43644 10155512 YP_004178533.1 CDS Isop_1399 NC_014962.1 2016893 2018974 D KEGG: rmr:Rmar_0200 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2016893..2018974 Isosphaera pallida ATCC 43644 10155513 YP_004178534.1 CDS Isop_1400 NC_014962.1 2019218 2019856 D COGs: COG4662 ABC-type tungstate transport system periplasmic component; InterPro IPR000515; KEGG: sti:Sthe_3396 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component; binding-protein-dependent transport system inner membrane protein 2019218..2019856 Isosphaera pallida ATCC 43644 10155514 YP_004178535.1 CDS Isop_1401 NC_014962.1 2019941 2020474 R KEGG: bta:100336730 myocyte enhancer factor 2D-like; SPTR: Putative uncharacterized protein; hypothetical protein complement(2019941..2020474) Isosphaera pallida ATCC 43644 10155515 YP_004178536.1 CDS Isop_1402 NC_014962.1 2020744 2021151 R KEGG: mjl:Mjls_5025 polysaccharide deacetylase; SPTR: Polysaccharide deacetylase; polysaccharide deacetylase complement(2020744..2021151) Isosphaera pallida ATCC 43644 10155516 YP_004178537.1 CDS Isop_1403 NC_014962.1 2021535 2022053 R KEGG: der:Dere_GG14334 GG14334 gene product from transcript GG14334-RA; SPTR: GG14334; hypothetical protein complement(2021535..2022053) Isosphaera pallida ATCC 43644 10155517 YP_004178538.1 CDS Isop_1404 NC_014962.1 2022323 2023474 R InterPro IPR012902: IPR001120; KEGG: plm:Plim_1767 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein complement(2022323..2023474) Isosphaera pallida ATCC 43644 10155518 YP_004178539.1 CDS Isop_1405 NC_014962.1 2023815 2025107 R KEGG: plm:Plim_2744 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2023815..2025107) Isosphaera pallida ATCC 43644 10155519 YP_004178540.1 CDS Isop_1406 NC_014962.1 2025235 2026428 R KEGG: rca:Rcas_4172 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2025235..2026428) Isosphaera pallida ATCC 43644 10155520 YP_004178541.1 CDS Isop_1407 NC_014962.1 2026473 2027639 R COGs: COG0430 RNA 3'-terminal phosphate cyclase; InterPro IPR000228; KEGG: tgr:Tgr7_1692 RNA 3'-phosphate cyclase; PFAM: RNA 3'-terminal phosphate cyclase; PRIAM: RNA-3'-phosphate cyclase; SPTR: RNA 3'-phosphate cyclase; PFAM: RNA 3'-terminal phosphate cyclase; TIGRFAM: RNA 3'-phosphate cyclase; RNA-3'-phosphate cyclase complement(2026473..2027639) Isosphaera pallida ATCC 43644 10155521 YP_004178542.1 CDS Isop_1408 NC_014962.1 2027834 2028184 R InterPro IPR005349; KEGG: ter:Tery_4061 hypothetical protein; PFAM: protein of unknown function UPF0136; SPTR: Putative uncharacterized protein; PFAM: Transmembrane proteins 14C; hypothetical protein complement(2027834..2028184) Isosphaera pallida ATCC 43644 10155522 YP_004178543.1 CDS Isop_1409 NC_014962.1 2028491 2029189 D KEGG: gvi:glr4340 hypothetical protein; SPTR: Glr4340 protein; PFAM: SOUL heme-binding protein; hypothetical protein 2028491..2029189 Isosphaera pallida ATCC 43644 10155523 YP_004178544.1 CDS Isop_1410 NC_014962.1 2029540 2031321 D COGs: COG1387 Histidinol phosphatase and related hydrolase of the PHP family; InterPro IPR004013: IPR002054: IPR003583: IPR003141; KEGG: tte:TTE2516 family X DNA polymerase IV; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; DNA polymerase X; Helix-hairpin-helix DNA-binding class 1; SPTR: PHP domain protein; PFAM: PHP domain; PHP domain-containing protein 2029540..2031321 Isosphaera pallida ATCC 43644 10155524 YP_004178545.1 CDS Isop_1411 NC_014962.1 2031380 2032144 R COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: psl:Psta_2844 LmbE family protein; PFAM: LmbE family protein; SPTR: Putative uncharacterized protein; PFAM: GlcNAc-PI de-N-acetylase; LmbE family protein complement(2031380..2032144) Isosphaera pallida ATCC 43644 10155525 YP_004178546.1 CDS Isop_1412 NC_014962.1 2032479 2034320 D KEGG: plm:Plim_3397 4-amino-4-deoxy-L-arabinose transferase-like glycosyltransferase of PMT family; SPTR: Putative uncharacterized protein; hypothetical protein 2032479..2034320 Isosphaera pallida ATCC 43644 10155527 YP_004178547.1 CDS Isop_1413 NC_014962.1 2034472 2035860 D COGs: COG1488 Nicotinic acid phosphoribosyltransferase; InterPro IPR006405: IPR015977: IPR007229; KEGG: pzu:PHZ_c0648 nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; SPTR: Nicotinate phosphoribosyltransferase; TIGRFAM: nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase (NAPRTase) family; TIGRFAM: putative nicotinate phosphoribosyltransferase; nicotinate phosphoribosyltransferase 2034472..2035860 Isosphaera pallida ATCC 43644 10155528 YP_004178548.1 CDS Isop_1414 NC_014962.1 2036002 2036544 R InterPro IPR017936: IPR013740: IPR017937; KEGG: mch:Mchl_0201 redoxin domain protein; PFAM: Redoxin domain protein; SPTR: Redoxin domain protein; PFAM: Redoxin; redoxin domain-containing protein complement(2036002..2036544) Isosphaera pallida ATCC 43644 10155529 YP_004178549.1 CDS Isop_1415 NC_014962.1 2036798 2038708 R COGs: COG0249 Mismatch repair ATPase (MutS family); InterPro IPR000432; KEGG: afw:Anae109_2424 DNA mismatch repair protein MutS domain-containing protein; PFAM: DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; SPTR: DNA mismatch repair protein MutS domain protein; PFAM: MutS domain V; DNA mismatch repair protein MutS domain-containing protein complement(2036798..2038708) Isosphaera pallida ATCC 43644 10155530 YP_004178550.1 CDS Isop_1416 NC_014962.1 2038902 2040461 R COGs: COG3670 Lignostilbene-alpha beta-dioxygenase; InterPro IPR006311: IPR004294; KEGG: cyt:cce_2215 retinal pigment epithelial membrane protein; PFAM: Carotenoid oxygenase; PRIAM: 9-cis-epoxycarotenoid dioxygenase; SPTR: Putative uncharacterized protein; PFAM: Retinal pigment epithelial membrane protein; 9-cis-epoxycarotenoid dioxygenase complement(2038902..2040461) Isosphaera pallida ATCC 43644 10155531 YP_004178551.1 CDS Isop_1417 NC_014962.1 2040527 2042296 R COGs: COG0173 Aspartyl-tRNA synthetase; InterProIPR006195: IPR004524: IPR004365: IPR004364: IPR 004115: IPR002312; KEGG: plm:Plim_3302 aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; GAD domain protein; SPTR: Aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type; aspartyl-tRNA synthetase complement(2040527..2042296) Isosphaera pallida ATCC 43644 10155532 YP_004178552.1 CDS Isop_1418 NC_014962.1 2042549 2044384 R KEGG: rrs:RoseRS_2250 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF2357); Protein of unknown function (DUF524); hypothetical protein complement(2042549..2044384) Isosphaera pallida ATCC 43644 10155533 YP_004178553.1 CDS Isop_1419 NC_014962.1 2044362 2047076 R COGs: COG1401 GTPase subunit of restriction endonuclease; KEGG: bcb:BCB4264_A0433 ATPase associated with various cellular activities AAA_5; SPTR: GTPase subunit of restriction endonuclease; hypothetical protein complement(2044362..2047076) Isosphaera pallida ATCC 43644 10155534 YP_004178554.1 CDS Isop_1420 NC_014962.1 2047854 2048816 D InterPro IPR006148; KEGG: plm:Plim_2730 glucosamine/galactosamine-6-phosphate isomerase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; SPTR: Glucosamine-6-phosphate isomerase, putative; PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; glucosamine/galactosamine-6-phosphate isomerase 2047854..2048816 Isosphaera pallida ATCC 43644 10155535 YP_004178555.1 CDS Isop_1421 NC_014962.1 2049142 2054976 R COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterProIPR003439: IPR017940: IPR005074: IPR001140: IPR 017871: IPR003593; KEGG: npu:Npun_F3763 ABC transporter related; PFAM: ABC transporter related; peptidase C39 bacteriocin processing; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: Peptidase C39 family; ABC transporter transmembrane region; ABC transporter; TIGRFAM: NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein; NHPM bacteriocin system ABC transporter, ATP-binding protein; ABC transporter-like protein complement(2049142..2054976) Isosphaera pallida ATCC 43644 10155536 YP_004178556.1 CDS Isop_1422 NC_014962.1 2055052 2056761 R KEGG: ana:alr7298 hypothetical protein; SPTR: Alr7298 protein; TIGRFAM: NHPM bacteriocin system secretion protein; hypothetical protein complement(2055052..2056761) Isosphaera pallida ATCC 43644 10155537 YP_004178557.1 CDS Isop_1423 NC_014962.1 2056826 2058142 R COGs: COG1915 conserved hypothetical protein; InterPro IPR005239: IPR007545; KEGG: psl:Psta_3748 LOR/SDH bifunctional protein conserved domain protein; PFAM: LOR/SDH bifunctional protein conserved domain protein; SPTR: LOR/SDH bifunctional protein conserved domain protein; PFAM: LOR/SDH bifunctional enzyme conserved region; TIGRFAM: conserved hypothetical protein TIGR00300; bifunctional protein LOR/SDH complement(2056826..2058142) Isosphaera pallida ATCC 43644 10155538 YP_004178558.1 CDS Isop_1424 NC_014962.1 2058603 2059796 D COGs: COG0310 ABC-type Co2+ transport system permease component; InterPro IPR002751; KEGG: rrs:RoseRS_0174 cobalamin (vitamin B12) biosynthesis CbiM protein; PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; SPTR: Cobalamin (Vitamin B12) biosynthesis CbiM protein; PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM; cobalamin (vitamin B12) biosynthesis protein CbiM 2058603..2059796 Isosphaera pallida ATCC 43644 10155539 YP_004178559.1 CDS Isop_1425 NC_014962.1 2059786 2061426 D COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003439: IPR003339: IPR017871: IPR003593; KEGG: tbi:Tbis_0515 cobalt ABC transporter ATPase subunit; PFAM: ABC transporter related; cobalt transport protein; SMART: AAA ATPase; SPTR: Cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter; Cobalt transport protein; ABC transporter-like protein 2059786..2061426 Isosphaera pallida ATCC 43644 10155540 YP_004178560.1 CDS Isop_1426 NC_014962.1 2061562 2062476 D COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198: IPR020904: IPR002347; KEGG: psl:Psta_3581 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Glucose 1-dehydrogenase-like protein; PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 2061562..2062476 Isosphaera pallida ATCC 43644 10155541 YP_004178561.1 CDS Isop_1427 NC_014962.1 2062830 2063033 D KEGG: tel:tll2350 virulence factor MviN-like protein; hypothetical protein 2062830..2063033 Isosphaera pallida ATCC 43644 10155543 YP_004178562.1 CDS Isop_1428 NC_014962.1 2063329 2065266 D COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: htu:Htur_3376 sulfatase; PFAM: sulfatase; SPTR: Sulfatase; PFAM: Sulfatase; sulfatase 2063329..2065266 Isosphaera pallida ATCC 43644 10155544 YP_004178563.1 CDS Isop_1429 NC_014962.1 2065935 2068883 D COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR016474: IPR010827: IPR000184; KEGG: plm:Plim_2365 outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein; SPTR: Outer membrane protein assembly complex, YaeT protein; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein; outer membrane protein assembly complex, YaeT protein 2065935..2068883 Isosphaera pallida ATCC 43644 10155545 YP_004178564.1 CDS Isop_1430 NC_014962.1 2069092 2072820 R InterPro IPR019734: IPR013026: IPR001440: IPR020053; KEGG: rca:Rcas_1124 hypothetical protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein complement(2069092..2072820) Isosphaera pallida ATCC 43644 10155546 YP_004178565.1 CDS Isop_1431 NC_014962.1 2072839 2073759 R InterPro IPR014284; KEGG: sis:LS215_1063 protein of unknown function DUF1156; SPTR: Putative uncharacterized protein; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 familyRNA polymerase sigma factor complement(2072839..2073759) Isosphaera pallida ATCC 43644 10155547 YP_004178566.1 CDS Isop_1432 NC_014962.1 2074334 2075875 R InterPro IPR014338: IPR001611; KEGG: hau:Haur_4051 hypothetical protein; SPTR: Leucine-rich repeat-containing protein typical subtype; TIGRFAM: repeat-companion domain protein; PFAM: Leucine Rich Repeat; TIGRFAM: repeat-companion domain TIGR02996; repeat-companion domain-containing protein complement(2074334..2075875) Isosphaera pallida ATCC 43644 10155548 YP_004178567.1 CDS Isop_1433 NC_014962.1 2076294 2077961 R InterPro IPR014338; KEGG: hau:Haur_4051 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: repeat-companion domain protein; TIGRFAM: repeat-companion domain TIGR02996; repeat-companion domain-containing protein complement(2076294..2077961) Isosphaera pallida ATCC 43644 10155549 YP_004178568.1 CDS Isop_1434 NC_014962.1 2078350 2079195 D COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198: IPR020904: IPR002347; KEGG: mno:Mnod_1178 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 2078350..2079195 Isosphaera pallida ATCC 43644 10155550 YP_004178569.1 CDS Isop_1435 NC_014962.1 2079652 2082228 D COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017442: IPR017441: IPR008271: IPR 020635: IPR002290; KEGG: fal:FRAAL4418 putative serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Putative serine/threonine protein kinase; PFAM: Protein kinase domain; serine/threonine protein kinase 2079652..2082228 Isosphaera pallida ATCC 43644 10155551 YP_004178570.1 CDS Isop_1436 NC_014962.1 2082644 2084770 D COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017442: IPR017441: IPR008271: IPR 020635: IPR002290; KEGG: hoh:Hoch_1100 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain; serine/threonine protein kinase 2082644..2084770 Isosphaera pallida ATCC 43644 10155552 YP_004178571.1 CDS Isop_1437 NC_014962.1 2084880 2086106 D KEGG: plm:Plim_3700 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2084880..2086106 Isosphaera pallida ATCC 43644 10155553 YP_004178572.1 CDS Isop_1438 NC_014962.1 2086136 2087434 D COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR002942: IPR006225: IPR006145: IPR006224; KEGG: psl:Psta_2843 pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: Pseudouridine synthase; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family; RluA family pseudouridine synthase 2086136..2087434 Isosphaera pallida ATCC 43644 10155554 YP_004178573.1 CDS Isop_1439 NC_014962.1 2087570 2090731 D InterPro IPR019734: IPR013026: IPR001440: IPR001917; KEGG: plm:Plim_3586 tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Putative uncharacterized protein; PFAM: Tetratricopeptide repeat; hypothetical protein 2087570..2090731 Isosphaera pallida ATCC 43644 10155555 YP_004178574.1 CDS Isop_1440 NC_014962.1 2090757 2091728 R COGs: COG0611 Thiamine monophosphate kinase; InterPro IPR006283: IPR000728: IPR010918; KEGG: psl:Psta_3917 thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; PRIAM: Thiamine-phosphate kinase; SPTR: Thiamine-monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein, N-terminal domain; TIGRFAM: thiamine-monophosphate kinase; thiamine-monophosphate kinase complement(2090757..2091728) Isosphaera pallida ATCC 43644 10155556 YP_004178575.1 CDS Isop_1441 NC_014962.1 2091725 2092960 R COGs: COG1929 Glycerate kinase; InterPro IPR004381; KEGG: mta:Moth_0404 glycerate kinase; PFAM: glycerate kinase; PRIAM: Glycerate kinase; SPTR: Glycerate kinase; TIGRFAM: glycerate kinase; PFAM: Glycerate kinase family; TIGRFAM: glycerate kinase; glycerate kinase complement(2091725..2092960) Isosphaera pallida ATCC 43644 10155557 YP_004178576.1 CDS Isop_1442 NC_014962.1 2092944 2094449 R COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR005467: IPR001789: IPR003661: IPR003594: IPR 004358; KEGG: sus:Acid_4297 response regulator receiver sensor signal transduction histidine kinase; PFAM: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SPTR: Response regulator receiver sensor signal transduction histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; response regulator receiver sensor signal transduction histidine kinase complement(2092944..2094449) Isosphaera pallida ATCC 43644 10155558 YP_004178577.1 CDS Isop_1443 NC_014962.1 2094879 2096957 D COGs: COG0171 NAD synthase; InterPro IPR003010: IPR003694: IPR014445; KEGG: psl:Psta_3194 NAD+ synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: NH(3)-dependent NAD(+) synthetase; TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; Carbon-nitrogen hydrolase; TIGRFAM: NAD+ synthetase; NAD+ synthetase 2094879..2096957 Isosphaera pallida ATCC 43644 10155559 YP_004178578.1 CDS Isop_1444 NC_014962.1 2097223 2098707 D COGs: COG0823 Periplasmic component of the Tol biopolymer transport system; InterPro IPR011659; KEGG: rrs:RoseRS_1915 WD40 domain-containing protein; PFAM: WD40-like beta Propeller containing protein; SPTR: WD40 domain protein beta Propeller; PFAM: WD40-like Beta Propeller Repeat; WD40-like beta Propeller containing protein 2097223..2098707 Isosphaera pallida ATCC 43644 10155560 YP_004178579.1 CDS Isop_1445 NC_014962.1 2098737 2099888 R COGs: COG0182 translation initiation factor 2B subunit eIF-2B alpha/beta/delta family; InterPro IPR005251: IPR011559: IPR000649; KEGG: mta:Moth_0703 translation initiation factor 2B subunit I; PFAM: initiation factor 2B related; PRIAM: S-methyl-5-thioribose-1-phosphate isomerase; SPTR: Methylthioribose-1-phosphate isomerase; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: Initiation factor 2 subunit family; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized proteins; S-methyl-5-thioribose-1-phosphate isomerase; methylthioribose-1-phosphate isomerase complement(2098737..2099888) Isosphaera pallida ATCC 43644 10155561 YP_004178580.1 CDS Isop_1446 NC_014962.1 2099943 2100266 R KEGG: pan:PODANSg7841 hypothetical protein; SPTR: Predicted protein; hypothetical protein complement(2099943..2100266) Isosphaera pallida ATCC 43644 10155562 YP_004178581.1 CDS Isop_1447 NC_014962.1 2100377 2101507 R COGs: COG0686 Alanine dehydrogenase; InterPro IPR008141: IPR007886: IPR007698: IPR008143; KEGG: plm:Plim_3804 alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; SPTR: Alanine dehydrogenase; TIGRFAM: alanine dehydrogenase; PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase; L-alanine dehydrogenase complement(2100377..2101507) Isosphaera pallida ATCC 43644 10155563 YP_004178582.1 CDS Isop_1448 NC_014962.1 2101691 2101990 R KEGG: cci:CC1G_09301 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2101691..2101990) Isosphaera pallida ATCC 43644 10155564 YP_004178583.1 CDS Isop_1449 NC_014962.1 2102357 2103502 D COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092: IPR006091: IPR006090; KEGG: gur:Gura_2352 acyl-CoA dehydrogenase domain-containing protein; PFAM: acyl-CoA dehydrogenase domain-containing protein; SPTR: Acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; acyl-CoA dehydrogenase domain-containing protein 2102357..2103502 Isosphaera pallida ATCC 43644 10155565 YP_004178584.1 CDS Isop_1450 NC_014962.1 2103720 2104865 D COGs: COG1088 dTDP-D-glucose 4 6-dehydratase; InterPro IPR005888: IPR001509; KEGG: msl:Msil_2711 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 2103720..2104865 Isosphaera pallida ATCC 43644 10155566 YP_004178585.1 CDS Isop_1451 NC_014962.1 2104862 2105761 D COGs: COG1209 dTDP-glucose pyrophosphorylase; InterPro IPR005907: IPR005835; KEGG: dol:Dole_1011 glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; SPTR: Glucose-1-phosphate thymidylyltransferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase, short form; glucose-1-phosphate thymidylyltransferase 2104862..2105761 Isosphaera pallida ATCC 43644 10155567 YP_004178586.1 CDS Isop_1452 NC_014962.1 2105758 2106357 D COGs: COG1898 dTDP-4-dehydrorhamnose 3 5-epimerase; InterPro IPR000888; KEGG: rxy:Rxyl_3120 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; PRIAM: dTDP-4-dehydrorhamnose 3,5-epimerase; SPTR: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; dTDP-4-dehydrorhamnose 3,5-epimerase 2105758..2106357 Isosphaera pallida ATCC 43644 10155568 YP_004178587.1 CDS Isop_1453 NC_014962.1 2106517 2106939 R COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789; KEGG: psl:Psta_3399 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator receiver protein; PFAM: Response regulator receiver domain; response regulator receiver protein complement(2106517..2106939) Isosphaera pallida ATCC 43644 10155569 YP_004178588.1 CDS Isop_1454 NC_014962.1 2107220 2107435 R KEGG: rcu:RCOM_0218920 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2107220..2107435) Isosphaera pallida ATCC 43644 10155570 YP_004178589.1 CDS Isop_1455 NC_014962.1 2107635 2109308 R COGs: COG1620 L-lactate permease; InterPro IPR003804; KEGG: ade:Adeh_2974 L-lactate transporter; PFAM: L-lactate permease; SPTR: L-lactate transporter; TIGRFAM: L-lactate transport; PFAM: L-lactate permease; TIGRFAM: L-lactate transport; L-lactate transport complement(2107635..2109308) Isosphaera pallida ATCC 43644 10155571 YP_004178590.1 CDS Isop_1456 NC_014962.1 2109573 2110724 D COGs: COG4301 conserved hypothetical protein; InterPro IPR017804: IPR019257; KEGG: npu:Npun_F2219 hypothetical protein; PFAM: Protein of unknown function DUF2260; SPTR: Putative uncharacterized protein; TIGRFAM: methyltransferase; PFAM: Uncharacterized conserved protein (DUF2260); TIGRFAM: probable methyltransferase; methyltransferase 2109573..2110724 Isosphaera pallida ATCC 43644 10155572 YP_004178591.1 CDS Isop_1457 NC_014962.1 2111018 2112436 D COGs: COG3572 Gamma-glutamylcysteine synthetase; InterPro IPR006336; KEGG: nml:Namu_1082 glutamate/cysteine ligase family protein; PFAM: glutamate--cysteine ligase GCS2; PRIAM: Glutamate--cysteine ligase; SPTR: Glutamate/cysteine ligase family protein; PFAM: Glutamate-cysteine ligase family 2(GCS2); TIGRFAM: glutamate--cysteine ligase, plant type; glutamate--cysteine ligase 2111018..2112436 Isosphaera pallida ATCC 43644 10155573 YP_004178592.1 CDS Isop_1458 NC_014962.1 2112808 2113428 D KEGG: bpm:BURPS1710b_1193 phosphoglycerate mutase family protein; SPTR: Possible integral membrane protein; hypothetical protein 2112808..2113428 Isosphaera pallida ATCC 43644 10155574 YP_004178593.1 CDS Isop_1459 NC_014962.1 2113558 2114691 D KEGG: sen:SACE_3494 enantiomer-selective amidase; SPTR: Enantiomer-selective amidase; hypothetical protein 2113558..2114691 Isosphaera pallida ATCC 43644 10155575 YP_004178594.1 CDS Isop_1460 NC_014962.1 2114718 2115683 R COGs: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); InterPro IPR011761: IPR006284: IPR004215: IPR004218; KEGG: scl:sce7568 glutathione synthetase; PFAM: glutathione synthetase ATP-binding; glutathione synthetase domain protein; PRIAM: Glutathione synthase; SPTR: Glutathione synthetase; TIGRFAM: glutathione synthetase; PFAM: Prokaryotic glutathione synthetase, N-terminal domain; Prokaryotic glutathione synthetase, ATP-grasp domain; TIGRFAM: glutathione synthetase, prokaryotic; glutathione synthetase complement(2114718..2115683) Isosphaera pallida ATCC 43644 10155576 YP_004178595.1 CDS Isop_1461 NC_014962.1 2115994 2117748 D KEGG: mca:MCA2974 PKD domain-containing protein; SPTR: PKD domain protein; hypothetical protein 2115994..2117748 Isosphaera pallida ATCC 43644 10155577 YP_004178596.1 CDS Isop_1462 NC_014962.1 2118039 2119460 D KEGG: pop:POPTR_658978 hypothetical protein; SPTR: Predicted protein; hypothetical protein 2118039..2119460 Isosphaera pallida ATCC 43644 10155578 YP_004178597.1 CDS Isop_1463 NC_014962.1 2119646 2120320 R COGs: COG1510 transcriptional regulator protein; KEGG: bpt:Bpet0455 putative transcriptional regulator; SPTR: Transcriptional regulator; PFAM: Sugar-specific transcriptional regulator TrmB; transcriptional regulator TrmB complement(2119646..2120320) Isosphaera pallida ATCC 43644 10155579 YP_004178598.1 CDS Isop_1464 NC_014962.1 2120689 2121195 R COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: mxa:MXAN_2962 response regulator; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator; PFAM: Response regulator receiver domain; response regulator receiver protein complement(2120689..2121195) Isosphaera pallida ATCC 43644 10155580 YP_004178599.1 CDS Isop_1465 NC_014962.1 2121199 2123004 R COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR005467: IPR000014: IPR000700: IPR013656: IPR 013767: IPR003661: IPR003594: IPR004358; KEGG: pin:Ping_1250 sensor histidine kinase PAS domain-containing protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; SPTR: PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; PAS/PAC sensor signal transduction histidine kinase complement(2121199..2123004) Isosphaera pallida ATCC 43644 10155581 YP_004178600.1 CDS Isop_1466 NC_014962.1 2123166 2124173 R KEGG: mxa:MXAN_2771 GvpL/GvpF family gas vesicle protein; SPTR: Gas vesicle protein, GvpL/GvpF family; PFAM: Gas vesicle synthesis protein GvpL/GvpF; hypothetical protein complement(2123166..2124173) Isosphaera pallida ATCC 43644 10155582 YP_004178601.1 CDS Isop_1467 NC_014962.1 2124304 2124735 R KEGG: azl:AZL_b00450 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2124304..2124735) Isosphaera pallida ATCC 43644 10155583 YP_004178602.1 CDS Isop_1468 NC_014962.1 2125315 2126427 D COGs: COG0760 Parvulin-like peptidyl-prolyl isomerase; InterPro IPR000297; KEGG: sfu:Sfum_0568 PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SPTR: Similar to peptidyl-prolyl cis-trans isomerase (Survival protein SurA); PFAM: PPIC-type PPIASE domain; PpiC-type peptidyl-prolyl cis-trans isomerase 2125315..2126427 Isosphaera pallida ATCC 43644 10155584 YP_004178603.1 CDS Isop_1469 NC_014962.1 2126625 2127377 D COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: plm:Plim_3596 LmbE family protein; PFAM: LmbE family protein; SPTR: LmbE family protein; PFAM: GlcNAc-PI de-N-acetylase; LmbE family protein 2126625..2127377 Isosphaera pallida ATCC 43644 10155585 YP_004178604.1 CDS Isop_1470 NC_014962.1 2127527 2127790 D KEGG: pla:Plav_2132 phosphomethylpyrimidine kinase; SPTR: Phosphomethylpyrimidine kinase; hypothetical protein 2127527..2127790 Isosphaera pallida ATCC 43644 10155586 YP_004178605.1 CDS Isop_1471 NC_014962.1 2128089 2128922 R COGs: COG1716 FOG: FHA domain; InterPro IPR000253; KEGG: rrs:RoseRS_3938 FHA domain-containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: FHA domain containing protein; PFAM: FHA domain; FHA domain-containing protein complement(2128089..2128922) Isosphaera pallida ATCC 43644 10155587 YP_004178606.1 CDS Isop_1472 NC_014962.1 2129295 2129648 D COGs: COG0780 Enzyme related to GTP cyclohydrolase I; InterPro IPR016856: IPR020602; KEGG: plm:Plim_2723 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; PRIAM: PreQ(1) synthase; SPTR: NADPH-dependent 7-cyano-7-deazaguanine reductase; TIGRFAM: 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I; TIGRFAM: 7-cyano-7-deazaguanine reductase; 7-cyano-7-deazaguanine reductase 2129295..2129648 Isosphaera pallida ATCC 43644 10155588 YP_004178607.1 CDS Isop_1473 NC_014962.1 2129767 2130648 D COGs: COG1912 conserved hypothetical protein; InterPro IPR002747; KEGG: psl:Psta_4032 protein of unknown function DUF62; PFAM: protein of unknown function DUF62; SPTR: Putative uncharacterized protein; PFAM: S-adenosyl-l-methionine hydroxide adenosyltransferase; hypothetical protein 2129767..2130648 Isosphaera pallida ATCC 43644 10155589 YP_004178608.1 CDS Isop_1474 NC_014962.1 2131305 2131961 R KEGG: plm:Plim_3431 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2131305..2131961) Isosphaera pallida ATCC 43644 10155591 YP_004178609.1 CDS Isop_1475 NC_014962.1 2132413 2133654 R COGs: COG0438 Glycosyltransferase; KEGG: ami:Amir_3661 glycosyl transferase group 1; SPTR: Putative uncharacterized protein; hypothetical protein complement(2132413..2133654) Isosphaera pallida ATCC 43644 10155592 YP_004178610.1 CDS Isop_1476 NC_014962.1 2134030 2134692 D InterPro IPR010496; KEGG: rba:RB569 hypothetical protein; PFAM: protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF1080); hypothetical protein 2134030..2134692 Isosphaera pallida ATCC 43644 10155593 YP_004178611.1 CDS Isop_1477 NC_014962.1 2134866 2136608 D COGs: COG0531 Amino acid transporter; InterPro IPR004841: IPR002293; KEGG: rpc:RPC_1838 amino acid permease-associated region; PFAM: amino acid permease-associated region; SPTR: Amino acid permease-associated region; PFAM: Amino acid permease; TC 2.A.3; amino acid/polyamine/organocation transporter 2134866..2136608 Isosphaera pallida ATCC 43644 10155594 YP_004178612.1 CDS Isop_1478 NC_014962.1 2136685 2138766 D COGs: COG1199 Rad3-related DNA helicase; InterPro IPR014013: IPR014001: IPR006554: IPR006555; KEGG: plm:Plim_0188 helicase C2; SMART: helicase c2; Helicase-like, DEXD box c2 type; DEAD-like helicase; SPTR: Helicase c2; PFAM: Type III restriction enzyme, res subunit; helicase c2 2136685..2138766 Isosphaera pallida ATCC 43644 10155595 YP_004178613.1 CDS Isop_1479 NC_014962.1 2138779 2139819 R InterPro IPR002509; KEGG: plm:Plim_0677 polysaccharide deacetylase; PFAM: polysaccharide deacetylase; SPTR: Polysaccharide deacetylase; PFAM: Polysaccharide deacetylase; polysaccharide deacetylase complement(2138779..2139819) Isosphaera pallida ATCC 43644 10155596 YP_004178614.1 CDS Isop_1480 NC_014962.1 2139806 2140987 R KEGG: sus:Acid_1360 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2139806..2140987) Isosphaera pallida ATCC 43644 10155597 YP_004178615.1 CDS Isop_1481 NC_014962.1 2141018 2142265 R COGs: COG1453 oxidoreductase of the aldo/keto reductase family; InterPro IPR017909: IPR001395: IPR020471; KEGG: hoh:Hoch_0560 aldo/keto reductase; PFAM: aldo/keto reductase; SPTR: Aldo/keto reductase; PFAM: Aldo/keto reductase family; aldo/keto reductase complement(2141018..2142265) Isosphaera pallida ATCC 43644 10155598 YP_004178616.1 CDS Isop_1482 NC_014962.1 2142366 2143421 R COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: cyc:PCC7424_0330 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase complement(2142366..2143421) Isosphaera pallida ATCC 43644 10155599 YP_004178617.1 CDS Isop_1483 NC_014962.1 2143469 2143807 R COGs: COG3536 conserved hypothetical protein; KEGG: ank:AnaeK_3736 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF971); hypothetical protein complement(2143469..2143807) Isosphaera pallida ATCC 43644 10155600 YP_004178618.1 CDS Isop_1484 NC_014962.1 2144033 2144263 D KEGG: cbr:CBG23538 Hypothetical protein CBG23538; SPTR: Putative uncharacterized protein; hypothetical protein 2144033..2144263 Isosphaera pallida ATCC 43644 10155601 YP_004178619.1 CDS Isop_1485 NC_014962.1 2144380 2147625 R COGs: COG1413 FOG: HEAT repeat; InterPro IPR009056: IPR013427: IPR004155; KEGG: psl:Psta_1217 heme-binding protein; PFAM: PBS lyase HEAT domain protein repeat-containing protein; SPTR: Putative uncharacterized protein; TIGRFAM: heme-binding protein; PFAM: Cytochrome c; PBS lyase HEAT-like repeat; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type; heme-binding protein complement(2144380..2147625) Isosphaera pallida ATCC 43644 10155602 YP_004178620.1 CDS Isop_1486 NC_014962.1 2147789 2149003 D COGs: COG2706 3-carboxymuconate cyclase; KEGG: psl:Psta_1125 6-phosphogluconolactonase; PRIAM: 6-phosphogluconolactonase; SPTR: 6-phosphogluconolactonase; PFAM: 3-carboxy-cis,cis-muconate lactonizing enzyme; 6-phosphogluconolactonase 2147789..2149003 Isosphaera pallida ATCC 43644 10155603 YP_004178621.1 CDS Isop_1487 NC_014962.1 2149155 2150585 R COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: psl:Psta_4258 sulfatase; PFAM: sulfatase; SPTR: Arylsulfatase; PFAM: Sulfatase; sulfatase complement(2149155..2150585) Isosphaera pallida ATCC 43644 10155604 YP_004178622.1 CDS Isop_1488 NC_014962.1 2150654 2151820 R COGs: COG0354 aminomethyltransferase related to GcvT; InterPro IPR017703: IPR006222; KEGG: psl:Psta_1957 folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); SPTR: Putative uncharacterized protein; TIGRFAM: folate-binding protein YgfZ; PFAM: Glycine cleavage T-protein C-terminal barrel domain; Aminomethyltransferase folate-binding domain; TIGRFAM: folate-binding protein YgfZ; folate-binding protein YgfZ complement(2150654..2151820) Isosphaera pallida ATCC 43644 10155605 YP_004178623.1 CDS Isop_1489 NC_014962.1 2151930 2152808 R COGs: COG0005 Purine nucleoside phosphorylase; InterPro IPR011268: IPR000845; KEGG: gtn:GTNG_2244 purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1; SPTR: Purine nucleoside phosphorylase; TIGRFAM: inosine guanosine and xanthosine phosphorylase family; PFAM: Phosphorylase superfamily; TIGRFAM: inosine guanosine and xanthosine phosphorylase family; inosine guanosine and xanthosine phosphorylase family protein complement(2151930..2152808) Isosphaera pallida ATCC 43644 10155606 YP_004178624.1 CDS Isop_1490 NC_014962.1 2152965 2154170 R COGs: COG1972 Nucleoside permease; InterPro IPR002668: IPR011642: IPR011657; KEGG: aca:ACP_1720 nucleoside:Na+ symporter, concentrative nucleoside transporter (CNT) family; PFAM: Na+ dependent nucleoside transporter domain protein; Na+ dependent nucleoside transporter; nucleoside recognition domain protein; SPTR: Nucleoside:Na+ symporter, concentrative nucleoside transporter (CNT) family; PFAM: Na+ dependent nucleoside transporter C-terminus; Na+ dependent nucleoside transporter N-terminus; Nucleoside recognition; TIGRFAM: nucleoside transporter; Na+ dependent nucleoside transporter domain-containing protein complement(2152965..2154170) Isosphaera pallida ATCC 43644 10155607 YP_004178625.1 CDS Isop_1491 NC_014962.1 2154317 2154916 R KEGG: sbi:SORBI_06g026125 hypothetical protein; SPTR: Hypothetical membrane protein; hypothetical protein complement(2154317..2154916) Isosphaera pallida ATCC 43644 10155608 YP_004178626.1 CDS Isop_1492 NC_014962.1 2155105 2156403 R COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase; InterPro IPR004722: IPR006680: IPR002195; KEGG: nde:NIDE2540 dihydroorotase; PFAM: amidohydrolase; SPTR: Dihydroorotase; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type; dihydroorotase complement(2155105..2156403) Isosphaera pallida ATCC 43644 10155609 YP_004178627.1 CDS Isop_1493 NC_014962.1 2156467 2157540 R COGs: COG0540 Aspartate carbamoyltransferase catalytic chain; InterProIPR002082: IPR006132: IPR006131: IPR006130: IPR 003006; KEGG: plm:Plim_2268 aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; SPTR: Aspartate carbamoyltransferase; TIGRFAM: aspartate carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase; aspartate carbamoyltransferase complement(2156467..2157540) Isosphaera pallida ATCC 43644 10155610 YP_004178628.1 CDS Isop_1494 NC_014962.1 2157719 2158342 R COGs: COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase; InterPro IPR000836; KEGG: pth:PTH_1813 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; PRIAM: Uracil phosphoribosyltransferase; SPTR: Bifunctional protein pyrR; PFAM: Phosphoribosyl transferase domain; uracil phosphoribosyltransferase complement(2157719..2158342) Isosphaera pallida ATCC 43644 10155611 YP_004178629.1 CDS Isop_1495 NC_014962.1 2158587 2158997 D COGs: COG2335 Secreted and surface protein containing fasciclin-like repeats; InterPro IPR000782; KEGG: plm:Plim_3576 beta-Ig-H3/fasciclin; PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin; SPTR: Beta-Ig-H3/fasciclin; PFAM: Fasciclin domain; beta-Ig-H3/fasciclin 2158587..2158997 Isosphaera pallida ATCC 43644 10155612 YP_004178630.1 CDS Isop_1496 NC_014962.1 2159456 2160661 D COGs: COG4398 conserved hypothetical protein; InterPro IPR013702: IPR019494: IPR016741; KEGG: psl:Psta_0358 domain of unknown function DUF1745; PFAM: domain of unknown function DUF1745; FIST C domain; SPTR: Putative uncharacterized protein; PFAM: FIST C domain; FIST N domain; hypothetical protein 2159456..2160661 Isosphaera pallida ATCC 43644 10155613 YP_004178631.1 CDS Isop_1497 NC_014962.1 2161035 2162036 D KEGG: scl:sce5405 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2161035..2162036 Isosphaera pallida ATCC 43644 10155614 YP_004178632.1 CDS Isop_1498 NC_014962.1 2162042 2164447 D KEGG: scl:sce5406 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: KAP family P-loop domain; hypothetical protein 2162042..2164447 Isosphaera pallida ATCC 43644 10155615 YP_004178633.1 CDS Isop_1499 NC_014962.1 2164444 2167044 D COGs: COG0433 ATPase; InterPro IPR003593; KEGG: scl:sce5407 hypothetical protein; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF87; AAA ATPase 2164444..2167044 Isosphaera pallida ATCC 43644 10155616 YP_004178634.1 CDS Isop_1500 NC_014962.1 2167037 2168407 R COGs: COG1118 ABC-type sulfate/molybdate transport systems ATPase component; InterProIPR003439: IPR014769: IPR005666: IPR013611: IPR 017871: IPR003593; KEGG: cyb:CYB_0238 sulfate ABC transporter, ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; SPTR: Sulfate ABC transporter, ATPase subunit; TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter; TOBE domain; TIGRFAM: sulfate ABC transporter, ATP-binding protein; sulfate ABC transporter ATPase complement(2167037..2168407) Isosphaera pallida ATCC 43644 10155617 YP_004178635.1 CDS Isop_1501 NC_014962.1 2168551 2169534 R COGs: COG4208 ABC-type sulfate transport system permease component; InterPro IPR000515: IPR005667; KEGG: cya:CYA_0468 sulfate ABC transporter, permease protein CysW; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Sulfate ABC transporter, permease protein CysW; TIGRFAM: sulfate ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: sulfate ABC transporter, permease protein CysW; sulfate ABC transporter, permease protein; sulfate ABC transporter permease complement(2168551..2169534) Isosphaera pallida ATCC 43644 10155618 YP_004178636.1 CDS Isop_1502 NC_014962.1 2169531 2170397 R COGs: COG0555 ABC-type sulfate transport system permease component; InterPro IPR000515: IPR005667; KEGG: hau:Haur_0258 sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Sulfate ABC transporter, inner membrane subunit; TIGRFAM: sulfate ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: sulfate ABC transporter, permease protein CysW; sulfate ABC transporter, permease protein; sulfate ABC transporter, permease protein CysT; sulfate ABC transporter permease complement(2169531..2170397) Isosphaera pallida ATCC 43644 10155619 YP_004178637.1 CDS Isop_1503 NC_014962.1 2170508 2171605 R COGs: COG1613 ABC-type sulfate transport system periplasmic component; InterPro IPR005669; KEGG: gym:GYMC10_5202 sulfate ABC transporter, periplasmic sulfate-binding protein; SPTR: Sulfate ABC transporter, periplasmic sulfate-binding protein; TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; TIGRFAM: sulfate/thiosulfate-binding protein; sulfate ABC transporter substrate-binding protein complement(2170508..2171605) Isosphaera pallida ATCC 43644 10155620 YP_004178638.1 CDS Isop_1504 NC_014962.1 2171839 2173728 D COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; InterPro IPR003342; KEGG: psl:Psta_3676 glycosyl transferase family 39; PFAM: glycosyl transferase family 39; SPTR: Glycosyl transferase family 39; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase; glycosyl transferase family protein 2171839..2173728 Isosphaera pallida ATCC 43644 10155621 YP_004178639.1 CDS Isop_1505 NC_014962.1 2173785 2174135 R COGs: COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related protein; InterPro IPR001950: IPR017228; KEGG: plm:Plim_0024 translation initiation factor SUI1; PFAM: translation initiation factor SUI1; SPTR: Putative uncharacterized protein; PFAM: Translation initiation factor SUI1; TIGRFAM: translation initation factor SUI1, putative, prokaryotic; translation initiation factor SUI1 complement(2173785..2174135) Isosphaera pallida ATCC 43644 10155622 YP_004178640.1 CDS Isop_1506 NC_014962.1 2174357 2175088 D COGs: COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase; InterPro IPR004507: IPR003382; KEGG: plm:Plim_2148 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; SPTR: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: Flavoprotein; TIGRFAM: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 2174357..2175088 Isosphaera pallida ATCC 43644 10155623 YP_004178641.1 CDS Isop_1507 NC_014962.1 2175155 2176171 D COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198: IPR020904: IPR002347; KEGG: cyb:CYB_0005 short chain dehydrogenase/reductase family oxidoreductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Oxidoreductase, short chain dehydrogenase/reductase family; PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 2175155..2176171 Isosphaera pallida ATCC 43644 10155624 YP_004178642.1 CDS Isop_1508 NC_014962.1 2176215 2177204 D COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase; InterPro IPR006371: IPR000537; KEGG: psl:Psta_1373 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase; SPTR: 4-hydroxybenzoate polyprenyltransferase; TIGRFAM: 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase family; TIGRFAM: putative 4-hydroxybenzoate polyprenyltransferase; 4-hydroxybenzoate polyprenyltransferase 2176215..2177204 Isosphaera pallida ATCC 43644 10155625 YP_004178643.1 CDS Isop_1509 NC_014962.1 2177441 2178658 R COGs: COG1835 acyltransferase; InterPro IPR002656; KEGG: bxe:Bxe_A2227 putative lipopolysaccharide biosynthesis-related membrane protein; PFAM: acyltransferase 3; SPTR: Putative lipopolysaccharide biosynthesis-related membrane protein; PFAM: Acyltransferase family; acyltransferase 3 complement(2177441..2178658) Isosphaera pallida ATCC 43644 10155626 YP_004178644.1 CDS Isop_1510 NC_014962.1 2179174 2180487 D COGs: COG2115 Xylose isomerase; InterPro IPR001998: IPR013452: IPR012307; KEGG: psl:Psta_4262 xylose isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel; PRIAM: Xylose isomerase; SPTR: Xylose isomerase; TIGRFAM: xylose isomerase; PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase; D-xylose isomerase 2179174..2180487 Isosphaera pallida ATCC 43644 10155627 YP_004178645.1 CDS Isop_1511 NC_014962.1 2180826 2181098 D KEGG: psl:Psta_2505 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Proteins of 100 residues with WXG; hypothetical protein 2180826..2181098 Isosphaera pallida ATCC 43644 10155628 YP_004178646.1 CDS Isop_1512 NC_014962.1 2181166 2181810 D KEGG: psl:Psta_2506 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2181166..2181810 Isosphaera pallida ATCC 43644 10155629 YP_004178647.1 CDS Isop_1513 NC_014962.1 2181875 2182096 D KEGG: psl:Psta_2507 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2181875..2182096 Isosphaera pallida ATCC 43644 10155630 YP_004178648.1 CDS Isop_1514 NC_014962.1 2182281 2186555 D COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR002543: IPR003593; KEGG: psl:Psta_2508 cell divisionFtsK/SpoIIIE; PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; SPTR: Cell divisionFtsK/SpoIIIE; PFAM: FtsK/SpoIIIE family; cell division protein FtsK 2182281..2186555 Isosphaera pallida ATCC 43644 10155631 YP_004178649.1 CDS Isop_1515 NC_014962.1 2186641 2187759 D COGs: COG1975 Xanthine and CO dehydrogenase maturation factor XdhC/CoxF family; InterPro IPR003777; KEGG: psl:Psta_3800 protein of unknown function DUF182; PFAM: protein of unknown function DUF182; SPTR: Putative uncharacterized protein; PFAM: XdhC and CoxI family; hypothetical protein 2186641..2187759 Isosphaera pallida ATCC 43644 10155632 YP_004178650.1 CDS Isop_1516 NC_014962.1 2187756 2188493 D COGs: COG2068 Uncharacterized MobA-related protein; KEGG: psl:Psta_3801 MobA-like protein; SPTR: Uncharacterized MobA-related protein-like protein; PFAM: Uncharacterized protein family UPF0007; MobA-like protein 2187756..2188493 Isosphaera pallida ATCC 43644 10155633 YP_004178651.1 CDS Isop_1517 NC_014962.1 2188557 2189825 R COGs: COG0513 Superfamily II DNA and RNA helicase; InterProIPR014021: IPR001650: IPR014014: IPR000629: IPR 014001: IPR011545; KEGG: psl:Psta_1620 DEAD/DEAH box helicase domain protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: DEAD/DEAH box helicase domain protein; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; DEAD/DEAH box helicase complement(2188557..2189825) Isosphaera pallida ATCC 43644 10155634 YP_004178652.1 CDS Isop_1518 NC_014962.1 2190589 2190825 D KEGG: plm:Plim_2599 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2190589..2190825 Isosphaera pallida ATCC 43644 10155635 YP_004178653.1 CDS Isop_1519 NC_014962.1 2191659 2192141 D KEGG: ote:Oter_3848 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2191659..2192141 Isosphaera pallida ATCC 43644 10155636 YP_004178654.1 CDS Isop_1520 NC_014962.1 2193001 2197605 D InterPro IPR019734: IPR013026: IPR001440; KEGG: dak:DaAHT2_1784 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: TPR repeat-containing protein; hypothetical protein 2193001..2197605 Isosphaera pallida ATCC 43644 10155637 YP_004178655.1 CDS Isop_1521 NC_014962.1 2197865 2198473 D COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; InterPro IPR002130: IPR020892; KEGG: ppf:Pput_1349 peptidyl-prolyl cis-trans isomerase, cyclophilin type; PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; PRIAM: Peptidylprolyl isomerase; SPTR: Peptidyl-prolyl cis-trans isomerase; PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; peptidyl-prolyl isomerase 2197865..2198473 Isosphaera pallida ATCC 43644 10155638 YP_004178656.1 CDS Isop_1522 NC_014962.1 2198776 2199072 D InterPro IPR017896: IPR000813: IPR017900; KEGG: psl:Psta_3004 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S binding domain; 4Fe-4S ferredoxin 2198776..2199072 Isosphaera pallida ATCC 43644 10155639 YP_004178657.1 CDS Isop_1523 NC_014962.1 2199344 2200612 D COGs: COG1092 SAM-dependent methyltransferase; InterPro IPR002478; KEGG: psl:Psta_0223 methyltransferase small; SMART: PUA domain containing protein; SPTR: Putative uncharacterized protein; PFAM: S-adenosylmethionine-dependent methyltransferase; PUA domain-containing protein 2199344..2200612 Isosphaera pallida ATCC 43644 10155640 YP_004178658.1 CDS Isop_1524 NC_014962.1 2200819 2201100 R KEGG: dpo:Dpse_GA26185 GA26185 gene product from transcript GA26185-RA; SPTR: Putative uncharacterized protein; hypothetical protein complement(2200819..2201100) Isosphaera pallida ATCC 43644 10155641 YP_004178659.1 CDS Isop_1525 NC_014962.1 2201333 2203897 R KEGG: tro:trd_1801 hypothetical protein; SPTR: Putative membrane protein; hypothetical protein complement(2201333..2203897) Isosphaera pallida ATCC 43644 10155642 YP_004178660.1 CDS Isop_1526 NC_014962.1 2203881 2205152 R COGs: COG1162 GTPase; InterPro IPR010914: IPR004881; KEGG: psl:Psta_2967 ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; SPTR: Ribosome small subunit-dependent GTPase A; TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A; ribosome small subunit-dependent GTPase A complement(2203881..2205152) Isosphaera pallida ATCC 43644 10155643 YP_004178661.1 CDS Isop_1527 NC_014962.1 2205404 2207068 D COGs: COG4799 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta); InterPro IPR011762: IPR011763: IPR000022; KEGG: psl:Psta_0088 propionyl-CoA carboxylase; PFAM: carboxyl transferase; PRIAM: Methylcrotonoyl-CoA carboxylase; SPTR: Propionyl-CoA carboxylase; PFAM: Carboxyl transferase domain; methylcrotonoyl-CoA carboxylase 2205404..2207068 Isosphaera pallida ATCC 43644 10155644 YP_004178662.1 CDS Isop_1528 NC_014962.1 2207117 2208124 D COGs: COG0369 Sulfite reductase alpha subunit (flavoprotein); InterProIPR017927: IPR001709: IPR012146: IPR008333: IPR 001433; KEGG: gvi:gvip312 ferredoxin--NADP+ reductase; PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; SPTR: Ferredoxin--NADP+ reductase; manually curated; PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; oxidoreductase FAD/NAD(P)-binding domain-containing protein 2207117..2208124 Isosphaera pallida ATCC 43644 10155645 YP_004178663.1 CDS Isop_1529 NC_014962.1 2208152 2209105 D COGs: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase; InterPro IPR006115; KEGG: hoh:Hoch_3369 6-phosphogluconate dehydrogenase NAD-binding protein; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; SPTR: 3-hydroxyisobutyrate dehydrogenase; PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; 6-phosphogluconate dehydrogenase 2208152..2209105 Isosphaera pallida ATCC 43644 10155646 YP_004178664.1 CDS Isop_1530 NC_014962.1 2209170 2210090 D COGs: COG0657 Esterase/lipase; KEGG: psl:Psta_2974 alpha/beta hydrolase fold-3 domain protein; SPTR: Alpha/beta hydrolase fold-3 domain protein; PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase 2209170..2210090 Isosphaera pallida ATCC 43644 10155647 YP_004178665.1 CDS Isop_1531 NC_014962.1 2210415 2212223 R InterPro IPR002035: IPR013026; KEGG: dma:DMR_35140 hypothetical protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: Tetratricopeptide TPR_2 repeat protein; manually curated; PFAM: von Willebrand factor type A domain; von Willebrand factor type A complement(2210415..2212223) Isosphaera pallida ATCC 43644 10155648 YP_004178666.1 CDS Isop_1532 NC_014962.1 2212288 2213031 R COGs: COG0217 conserved hypothetical protein; InterPro IPR002876; KEGG: plm:Plim_2554 protein of unknown function DUF28; PFAM: protein of unknown function DUF28; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family; hypothetical protein complement(2212288..2213031) Isosphaera pallida ATCC 43644 10155649 YP_004178667.1 CDS Isop_1533 NC_014962.1 2213288 2215966 R InterPro IPR019734: IPR013026: IPR001440; KEGG: plm:Plim_2555 tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Tetratricopeptide TPR_2 repeat protein; hypothetical protein complement(2213288..2215966) Isosphaera pallida ATCC 43644 10155650 YP_004178668.1 CDS Isop_1534 NC_014962.1 2216378 2216929 R COGs: COG2335 Secreted and surface protein containing fasciclin-like repeats; InterPro IPR000782; KEGG: vha:VIBHAR_06660 hypothetical protein; PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin; SPTR: Beta-Ig-H3/fasciclin; PFAM: Fasciclin domain; beta-Ig-H3/fasciclin complement(2216378..2216929) Isosphaera pallida ATCC 43644 10155651 YP_004178669.1 CDS Isop_1535 NC_014962.1 2217068 2218255 R KEGG: psl:Psta_4659 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2217068..2218255) Isosphaera pallida ATCC 43644 10155652 YP_004178670.1 CDS Isop_1536 NC_014962.1 2218452 2218994 R COGs: COG0858 Ribosome-binding factor A; InterPro IPR000238: IPR020053; KEGG: psl:Psta_4658 ribosome-binding factor A; PFAM: ribosome-binding factor A; SPTR: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; ribosome-binding factor A complement(2218452..2218994) Isosphaera pallida ATCC 43644 10155653 YP_004178671.1 CDS Isop_1537 NC_014962.1 2219377 2223066 R COGs: COG0532 Translation initiation factor 2 (IF-2; GTPase); InterProIPR000178: IPR005225: IPR006847: IPR000795: IPR 004161; KEGG: psl:Psta_4657 translation initiation factor IF-2; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain-containing protein; elongation factor Tu domain 2 protein; SPTR: Translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2; translation initiation factor IF-2 complement(2219377..2223066) Isosphaera pallida ATCC 43644 10155654 YP_004178672.1 CDS Isop_1538 NC_014962.1 2223606 2225168 R COGs: COG0195 Transcription elongation factor; InterProIPR004088: IPR003029: IPR004087: IPR010213: IPR 013735; KEGG: plm:Plim_2559 transcription termination factor NusA; PFAM: NusA domain-containing protein; RNA binding S1 domain protein; SMART: KH domain protein; SPTR: Transcription elongation factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: NusA N-terminal domain; S1 RNA binding domain; TIGRFAM: transcription termination factor NusA; transcription termination factor NusA, C-terminal duplication; NusA antitermination factor complement(2223606..2225168) Isosphaera pallida ATCC 43644 10155655 YP_004178673.1 CDS Isop_1539 NC_014962.1 2225708 2226223 D COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: tte:TTE1767 Fe2+/Zn2+ uptake regulation proteins; PFAM: ferric-uptake regulator; SPTR: Ferric uptake regulator, Fur family; PFAM: Ferric uptake regulator family; Fur family ferric uptake regulator 2225708..2226223 Isosphaera pallida ATCC 43644 10155656 YP_004178674.1 CDS Isop_1540 NC_014962.1 2226274 2227074 D COGs: COG0084 Mg-dependent DNase; InterPro IPR018228: IPR015991: IPR012278: IPR001130; KEGG: psl:Psta_3152 hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; SPTR: Hydrolase, TatD family; TIGRFAM: hydrolase, TatD family; manually curated; PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family; TatD family hydrolase 2226274..2227074 Isosphaera pallida ATCC 43644 10155657 YP_004178675.1 CDS Isop_1541 NC_014962.1 2227374 2231207 D COGs: COG2319 FOG: WD40 repeat; InterProIPR019782: IPR017986: IPR019775: IPR001680: IPR 019781; KEGG: rrs:RoseRS_0892 WD-40 repeat-containing protein; PFAM: WD40 repeat, subgroup; SMART: WD-40 repeat-containing protein; SPTR: WD-40 repeat; PFAM: WD domain, G-beta repeat; WD40 repeat-containing protein 2227374..2231207 Isosphaera pallida ATCC 43644 10155658 YP_004178676.1 CDS Isop_1542 NC_014962.1 2231204 2233870 D COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017441: IPR008271: IPR020635: IPR 002290: IPR017442: IPR005532; KEGG: plm:Plim_1473 serine/threonine protein kinase-related protein; PFAM: Serine/threonine-protein kinase-like domain; protein of unknown function DUF323; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase-related protein; PFAM: Protein kinase domain; Formylglycine-generating sulfatase enzyme; serine/threonine protein kinase 2231204..2233870 Isosphaera pallida ATCC 43644 10155659 YP_004178677.1 CDS Isop_1543 NC_014962.1 2233867 2238684 D InterProIPR019782: IPR017986: IPR018247: IPR001680: IPR 019781; KEGG: rrs:RoseRS_4025 NB-ARC domain-containing protein; PFAM: WD40 repeat, subgroup; SMART: WD-40 repeat-containing protein; SPTR: NB-ARC domain protein; PFAM: WD domain, G-beta repeat; WD40 repeat-containing protein 2233867..2238684 Isosphaera pallida ATCC 43644 10155660 YP_004178678.1 CDS Isop_1544 NC_014962.1 2238575 2238988 R COGs: COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase; InterPro IPR017941; KEGG: rba:RB5336 assimilatory nitrite reductase [NAD(P)H] small subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: Probable assimilatory nitrite reductase [NAD(P)H] small subunit; PFAM: Rieske [2Fe-2S] domain; Rieske (2Fe-2S) domain-containing protein complement(2238575..2238988) Isosphaera pallida ATCC 43644 10155661 YP_004178679.1 CDS Isop_1545 NC_014962.1 2239061 2239990 R KEGG: psl:Psta_4540 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2239061..2239990) Isosphaera pallida ATCC 43644 10155662 YP_004178680.1 CDS Isop_1546 NC_014962.1 2239987 2241024 R COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: psl:Psta_4539 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter; ABC transporter-like protein complement(2239987..2241024) Isosphaera pallida ATCC 43644 10155663 YP_004178681.1 CDS Isop_1547 NC_014962.1 2241219 2241626 R InterPro IPR001387; KEGG: ami:Amir_3407 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Transcriptional regulator, XRE family; PFAM: Helix-turn-helix; helix-turn-helix domain-containing protein complement(2241219..2241626) Isosphaera pallida ATCC 43644 10155664 YP_004178682.1 CDS Isop_1548 NC_014962.1 2242401 2242826 D InterPro IPR000866; KEGG: nca:Noca_1643 hypothetical protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Putative uncharacterized protein; manually curated; PFAM: AhpC/TSA family; alkyl hydroperoxide reductase 2242401..2242826 Isosphaera pallida ATCC 43644 10155665 YP_004178683.1 CDS Isop_1549 NC_014962.1 2243122 2244057 R KEGG: psl:Psta_1016 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2243122..2244057) Isosphaera pallida ATCC 43644 10155666 YP_004178684.1 CDS Isop_1550 NC_014962.1 2244235 2248659 R COGs: COG1196 Chromosome segregation ATPase; KEGG: lma:LmjF34.0690 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2244235..2248659) Isosphaera pallida ATCC 43644 10155667 YP_004178685.1 CDS Isop_1551 NC_014962.1 2249347 2250366 D COGs: COG1085 Galactose-1-phosphate uridylyltransferase; InterPro IPR001937; KEGG: nde:NIDE3393 galactose-1-phosphate uridylyltransferase; PRIAM: UDP-glucose--hexose-1-phosphate uridylyltransferase; SPTR: Galactose-1-phosphate uridylyltransferase; PFAM: Galactose-1-phosphate uridyl transferase, N-terminal domain; TIGRFAM: galactose-1-phosphate uridylyltransferase, family 1; UDP-glucose--hexose-1- phosphateuridylyltransferase 2249347..2250366 Isosphaera pallida ATCC 43644 10155668 YP_004178686.1 CDS Isop_1552 NC_014962.1 2250742 2252991 D COGs: COG1449 Alpha-amylase/alpha-mannosidase; InterPro IPR015178: IPR004300: IPR015179; KEGG: psl:Psta_3212 4-alpha-glucanotransferase; PFAM: Domain of unknown function DUF1926; Domain of unknown function DUF1925; glycoside hydrolase family 57; PRIAM: 4-alpha-glucanotransferase; SPTR: Alpha-amylase; PFAM: Domain of unknown function (DUF1925); Glycosyl hydrolase family 57; Domain of unknown function (DUF1926); 4-alpha-glucanotransferase 2250742..2252991 Isosphaera pallida ATCC 43644 10155669 YP_004178687.1 CDS Isop_1553 NC_014962.1 2253082 2253981 D COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: dal:Dalk_3474 hypothetical protein; PFAM: protein of unknown function DUF58; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF58; hypothetical protein 2253082..2253981 Isosphaera pallida ATCC 43644 10155670 YP_004178688.1 CDS Isop_1554 NC_014962.1 2254342 2255937 D COGs: COG0539 Ribosomal protein S1; InterPro IPR003029: IPR000110; KEGG: psl:Psta_0370 RNA binding S1 domain protein; PFAM: RNA binding S1 domain protein; SPTR: RNA binding S1 domain protein; PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1; RNA-binding S1 domain-containing protein 2254342..2255937 Isosphaera pallida ATCC 43644 10155671 YP_004178689.1 CDS Isop_1555 NC_014962.1 2256181 2257824 D COGs: COG0504 CTP synthase (UTP-ammonia lyase); InterPro IPR017926: IPR004468: IPR017456: IPR000991; KEGG: psl:Psta_0161 CTP synthase; PFAM: CTP synthase-like; glutamine amidotransferase class-I; PRIAM: CTP synthase; SPTR: CTP synthase; TIGRFAM: CTP synthase; PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase; CTP synthase 2256181..2257824 Isosphaera pallida ATCC 43644 10155672 YP_004178690.1 CDS Isop_1556 NC_014962.1 2257905 2260763 R COGs: COG3119 Arylsulfatase A; InterPro IPR002052: IPR008265: IPR001087: IPR000917; KEGG: psl:Psta_3960 sulfatase; PFAM: sulfatase; lipolytic protein G-D-S-L family; SPTR: Choline sulfatase; PFAM: GDSL-like Lipase/Acylhydrolase; Sulfatase; sulfatase complement(2257905..2260763) Isosphaera pallida ATCC 43644 10155673 YP_004178691.1 CDS Isop_1557 NC_014962.1 2261056 2262288 D COGs: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; InterPro IPR001789: IPR003607: IPR006674; KEGG: dak:DaAHT2_0731 response regulator receiver modulated metal dependent phosphohydrolase; PFAM: response regulator receiver; metal-dependent phosphohydrolase HD sub domain; SMART: response regulator receiver; metal-dependent phosphohydrolase HD region; SPTR: Response regulator receiver modulated metal dependent phosphohydrolase; PFAM: HD domain; Response regulator receiver domain; response regulator receiver modulated metal dependent phosphohydrolase 2261056..2262288 Isosphaera pallida ATCC 43644 10155674 YP_004178692.1 CDS Isop_1559 NC_014962.1 2263754 2265136 D COGs: COG0303 Molybdopterin biosynthesis enzyme; InterPro IPR020817: IPR005110: IPR001453: IPR005111; KEGG: scl:sce9309 molybdenum cofactor biosynthesis protein; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV; SPTR: Molybdenum cofactor biosynthesis protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain; molybdenum cofactor synthesis domain-containing protein 2263754..2265136 Isosphaera pallida ATCC 43644 10155678 YP_004178693.1 CDS Isop_1560 NC_014962.1 2265147 2266190 R KEGG: aav:Aave_4115 putative phage repressor; SPTR: Putative uncharacterized protein; hypothetical protein complement(2265147..2266190) Isosphaera pallida ATCC 43644 10155679 YP_004178694.1 CDS Isop_1561 NC_014962.1 2266474 2267958 R COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR008271: IPR020635: IPR002290: IPR 017442; KEGG: hau:Haur_2960 serine/threonine protein kinase with PASTA sensor(s); PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Transmembrane serine/threonine protein kinase D; PFAM: Protein kinase domain; serine/threonine protein kinase complement(2266474..2267958) Isosphaera pallida ATCC 43644 10155680 YP_004178695.1 CDS Isop_1562 NC_014962.1 2267955 2270033 R InterPro IPR017871; KEGG: cwo:Cwoe_4509 glycosyl transferase family 39; SPTR: Glycosyl transferase family 39; hypothetical protein complement(2267955..2270033) Isosphaera pallida ATCC 43644 10155681 YP_004178696.1 CDS Isop_1563 NC_014962.1 2270227 2270550 R COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: reu:Reut_A0291 nitrogen regulatory protein P-II; PFAM: nitrogen regulatory protein P-II; SPTR: Nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein P-II; nitrogen regulatory protein P-II complement(2270227..2270550) Isosphaera pallida ATCC 43644 10155682 YP_004178697.1 CDS Isop_1564 NC_014962.1 2270689 2270922 R COGs: COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing); InterPro IPR003751; KEGG: plm:Plim_0341 carbon storage regulator; PFAM: carbon storage regulator; SPTR: Carbon storage regulator homolog; PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA); carbon storage regulator CsrA complement(2270689..2270922) Isosphaera pallida ATCC 43644 10155683 YP_004178698.1 CDS Isop_1565 NC_014962.1 2271276 2272445 R InterPro IPR010791; KEGG: cch:Cag_0393 hydroxyneurosporene synthase CrtC; PFAM: hydroxyneurosporene synthase; SPTR: Hydroxyneurosporene synthase; PFAM: Hydroxyneurosporene synthase (CrtC); hydroxyneurosporene synthase complement(2271276..2272445) Isosphaera pallida ATCC 43644 10155684 YP_004178699.1 CDS Isop_1566 NC_014962.1 2272455 2273468 R COGs: COG1562 Phytoene/squalene synthetase; InterPro IPR019845: IPR002060; KEGG: mxa:MXAN_0896 phytoene synthetase; PFAM: Squalene/phytoene synthase; PRIAM: Phytoene synthase; SPTR: Phytoene synthase; PFAM: Squalene/phytoene synthase; phytoene synthase complement(2272455..2273468) Isosphaera pallida ATCC 43644 10155685 YP_004178700.1 CDS Isop_1567 NC_014962.1 2273469 2275034 R COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR008150: IPR014105: IPR002937; KEGG: hau:Haur_3185 zeta-phytoene desaturase; PFAM: amine oxidase; SPTR: Zeta-phytoene desaturase; TIGRFAM: phytoene desaturase; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase; phytoene desaturase complement(2273469..2275034) Isosphaera pallida ATCC 43644 10155686 YP_004178701.1 CDS Isop_1568 NC_014962.1 2275031 2276125 R COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: saq:Sare_4930 polyprenyl synthetase; PFAM: Polyprenyl synthetase; SPTR: Polyprenyl synthetase; PFAM: Polyprenyl synthetase; polyprenyl synthetase complement(2275031..2276125) Isosphaera pallida ATCC 43644 10155687 YP_004178702.1 CDS Isop_1569 NC_014962.1 2276419 2276631 R InterPro IPR005584; KEGG: ade:Adeh_1859 hypothetical protein; PFAM: protein of unknown function DUF329; SPTR: UPF0243 zinc-binding protein Adeh_1859; PFAM: Domain of unknown function (DUF329); hypothetical protein complement(2276419..2276631) Isosphaera pallida ATCC 43644 10155688 YP_004178703.1 CDS Isop_1570 NC_014962.1 2276746 2277096 R COGs: COG2331 conserved hypothetical protein; InterPro IPR013429; KEGG: plm:Plim_2923 regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; SPTR: Regulatory protein, FmdB family; TIGRFAM: regulatory protein, FmdB family; PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family; FmdB family regulatory protein complement(2276746..2277096) Isosphaera pallida ATCC 43644 10155689 YP_004178704.1 CDS Isop_1571 NC_014962.1 2277238 2277846 R COGs: COG0576 Molecular chaperone GrpE (heat shock protein); InterPro IPR000740; KEGG: tjr:TherJR_2451 GrpE protein; PFAM: GrpE protein; SPTR: GrpE protein; PFAM: GrpE; GrpE protein HSP-70 cofactor complement(2277238..2277846) Isosphaera pallida ATCC 43644 10155690 YP_004178705.1 CDS Isop_1572 NC_014962.1 2278035 2279207 R COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterProIPR001623: IPR001305: IPR012724: IPR003095: IPR 018253: IPR002939; KEGG: psl:Psta_3026 chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; DnaJ central domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: Chaperone protein dnaJ; TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ central domain (4 repeats); DnaJ C terminal region; DnaJ domain; TIGRFAM: chaperone protein DnaJ; chaperone protein DnaJ complement(2278035..2279207) Isosphaera pallida ATCC 43644 10155691 YP_004178706.1 CDS Isop_1573 NC_014962.1 2279686 2281308 R COGs: COG0459 Chaperonin GroEL (HSP60 family); InterPro IPR001844: IPR002423; KEGG: plm:Plim_2926 chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; SPTR: 60 kDa chaperonin; TIGRFAM: chaperonin GroEL; PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL; chaperonin GroEL complement(2279686..2281308) Isosphaera pallida ATCC 43644 10155692 YP_004178707.1 CDS Isop_1574 NC_014962.1 2281558 2281854 R COGs: COG0234 Co-chaperonin GroES (HSP10); InterPro IPR001476: IPR018369: IPR020818; KEGG: psl:Psta_3024 chaperonin Cpn10; PFAM: Chaperonin Cpn10; SPTR: 10 kDa chaperonin; PFAM: Chaperonin 10 Kd subunit; chaperonin Cpn10 complement(2281558..2281854) Isosphaera pallida ATCC 43644 10155693 YP_004178708.1 CDS Isop_1575 NC_014962.1 2282052 2283689 R COGs: COG0459 Chaperonin GroEL (HSP60 family); InterPro IPR001844: IPR002423; KEGG: psl:Psta_3023 chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; SPTR: 60 kDa chaperonin; TIGRFAM: chaperonin GroEL; PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL; chaperonin GroEL complement(2282052..2283689) Isosphaera pallida ATCC 43644 10155694 YP_004178709.1 CDS Isop_1576 NC_014962.1 2283710 2283901 R KEGG: pno:SNOG_10790 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2283710..2283901) Isosphaera pallida ATCC 43644 10155695 YP_004178710.1 CDS Isop_1577 NC_014962.1 2284146 2285012 D COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: tro:trd_1849 glycosyl transferase, family 2:glycosyl transferase, group 1; PFAM: Methyltransferase type 11; SPTR: Glycosyl transferase, family 2:Glycosyl transferase, group 1; PFAM: Methyltransferase domain; type 11 methyltransferase 2284146..2285012 Isosphaera pallida ATCC 43644 10155696 YP_004178711.1 CDS Isop_1578 NC_014962.1 2285297 2286307 D COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR002220: IPR005829; KEGG: psl:Psta_3336 dihydrodipicolinate synthetase; PFAM: dihydrodipicolinate synthetase; SPTR: Dihydrodipicolinate synthetase; PFAM: Dihydrodipicolinate synthetase family; dihydrodipicolinate synthetase 2285297..2286307 Isosphaera pallida ATCC 43644 10155697 YP_004178712.1 CDS Isop_1579 NC_014962.1 2286406 2287383 R COGs: COG0030 Dimethyladenosine transferase (rRNA methylation); InterPro IPR011530: IPR020596: IPR020598: IPR001737; KEGG: psl:Psta_2598 dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; SMART: Ribosomal RNA adenine methylase transferase-like; SPTR: Ribosomal RNA small subunit methyltransferase A; TIGRFAM: dimethyladenosine transferase; PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase; dimethyladenosine transferase complement(2286406..2287383) Isosphaera pallida ATCC 43644 10155698 YP_004178713.1 CDS Isop_1580 NC_014962.1 2287459 2288088 R COGs: COG0307 Riboflavin synthase alpha chain; InterPro IPR001783; KEGG: rba:RB12379 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein; PRIAM: Riboflavin synthase; SPTR: Riboflavin synthase alpha chain; TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit; riboflavin synthase subunit alpha complement(2287459..2288088) Isosphaera pallida ATCC 43644 10155699 YP_004178714.1 CDS Isop_1581 NC_014962.1 2288378 2289451 R COGs: COG1703 Putative periplasmic protein kinase ArgK and related GTPase of G3E family; InterPro IPR000812: IPR005129; KEGG: mav:MAV_3276 arginine/ornithine transport system ATPase; PFAM: ArgK protein; SPTR: Arginine/ornithine transport system ATPase; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; TIGRFAM: LAO/AO transport system ATPase; LAO/AO transport system ATPase complement(2288378..2289451) Isosphaera pallida ATCC 43644 10155700 YP_004178715.1 CDS Isop_1582 NC_014962.1 2289518 2291773 R COGs: COG1884 Methylmalonyl-CoA mutase N-terminal domain/subunit; InterPro IPR006158: IPR006098: IPR006159: IPR006099; KEGG: mxa:MXAN_2263 methylmalonyl-CoA mutase; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein; PRIAM: Methylmalonyl-CoA mutase; SPTR: Methylmalonyl-CoA mutase, alpha subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: Methylmalonyl-CoA mutase; B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain; methylmalonyl-CoA mutase C-terminal domain; methylmalonyl-CoA mutase large subunit complement(2289518..2291773) Isosphaera pallida ATCC 43644 10155701 YP_004178716.1 CDS Isop_1583 NC_014962.1 2291770 2293965 R COGs: COG1884 Methylmalonyl-CoA mutase N-terminal domain/subunit; InterPro IPR006099; KEGG: rru:Rru_A2480 methylmalonyl-CoA mutase; PFAM: methylmalonyl-CoA mutase; PRIAM: Methylmalonyl-CoA mutase; SPTR: Methylmalonyl-CoA mutase; PFAM: Methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain; methylmalonyl-CoA mutase, heterodimeric type, beta chain; methylmalonyl-CoA mutase complement(2291770..2293965) Isosphaera pallida ATCC 43644 10155702 YP_004178717.1 CDS Isop_1584 NC_014962.1 2293962 2295461 R COGs: COG0427 Acetyl-CoA hydrolase; InterPro IPR017821: IPR003702; KEGG: dal:Dalk_0129 succinate CoA transferase; PFAM: acetyl-CoA hydrolase/transferase; PRIAM: Acetyl-CoA hydrolase; SPTR: Succinate CoA transferase; TIGRFAM: succinate CoA transferase; PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain; Citrate lyase, alpha subunit (CitF); TIGRFAM: succinate CoA transferases; succinate CoA transferase complement(2293962..2295461) Isosphaera pallida ATCC 43644 10155703 YP_004178718.1 CDS Isop_1585 NC_014962.1 2295540 2297000 R COGs: COG1883 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit; InterPro IPR005661; KEGG: plt:Plut_1434 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit; PRIAM: Oxaloacetate decarboxylase; SPTR: Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; sodium ion-translocating decarboxylase subunit beta complement(2295540..2297000) Isosphaera pallida ATCC 43644 10155704 YP_004178719.1 CDS Isop_1586 NC_014962.1 2297062 2297454 R COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit; InterPro IPR000089; KEGG: cag:Cagg_0997 biotin/lipoyl attachment domain-containing protein; PFAM: biotin/lipoyl attachment domain-containing protein; SPTR: Biotin/lipoyl attachment domain-containing protein; PFAM: Biotin-requiring enzyme; biotin/lipoyl attachment domain-containing protein complement(2297062..2297454) Isosphaera pallida ATCC 43644 10155705 YP_004178720.1 CDS Isop_1587 NC_014962.1 2297523 2298011 R InterPro IPR005899; KEGG: caa:Caka_0798 sodium pump decarboxylase gamma subunit; PFAM: sodium pump decarboxylase gamma subunit; SPTR: Sodium pump decarboxylase gamma subunit; PFAM: Oxaloacetate decarboxylase, gamma chain; TIGRFAM: sodium pump decarboxylases, gamma subunit; sodium pump decarboxylase subunit gamma complement(2297523..2298011) Isosphaera pallida ATCC 43644 10155706 YP_004178721.1 CDS Isop_1588 NC_014962.1 2298008 2299588 R COGs: COG4799 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta); InterPro IPR011762: IPR011763: IPR000438: IPR000022; KEGG: sus:Acid_6960 carboxyl transferase; PFAM: carboxyl transferase; SPTR: Carboxyl transferase; PFAM: Carboxyl transferase domain; carboxyl transferase complement(2298008..2299588) Isosphaera pallida ATCC 43644 10155707 YP_004178722.1 CDS Isop_1589 NC_014962.1 2299703 2300131 R InterPro IPR017515: IPR004360; KEGG: glo:Glov_3258 methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Methylmalonyl-CoA epimerase; TIGRFAM: methylmalonyl-CoA epimerase; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: methylmalonyl-CoA epimerase; methylmalonyl-CoA epimerase complement(2299703..2300131) Isosphaera pallida ATCC 43644 10155708 YP_004178723.1 CDS Isop_1590 NC_014962.1 2300585 2303113 D COGs: COG3391 conserved hypothetical protein; InterPro IPR007312; KEGG: sli:Slin_6217 40-residue YVTN family beta-propeller repeat protein; PFAM: phosphoesterase; SPTR: 40-residue YVTN family beta-propeller repeat protein; PFAM: SMP-30/Gluconolaconase/LRE-like region; Phosphoesterase family; 3-carboxy-cis,cis-muconate lactonizing enzyme; phosphoesterase 2300585..2303113 Isosphaera pallida ATCC 43644 10155709 YP_004178724.1 CDS Isop_1591 NC_014962.1 2303273 2305852 R COGs: COG1538 Outer membrane protein; KEGG: plm:Plim_2805 outer membrane efflux protein; SPTR: Putative uncharacterized protein; PFAM: Outer membrane efflux protein; hypothetical protein complement(2303273..2305852) Isosphaera pallida ATCC 43644 10155710 YP_004178725.1 CDS Isop_1592 NC_014962.1 2306373 2309519 R InterPro IPR000788: IPR013344: IPR013678; KEGG: psl:Psta_0580 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: Ribonucleotide reductase class II vitamin B12-dependent; ribonucleotide reductase large subunit; PRIAM: Ribonucleoside-diphosphate reductase; SPTR: Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: Class II vitamin B12-dependent ribonucleotide reductase; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; ribonucleoside-diphosphate reductase complement(2306373..2309519) Isosphaera pallida ATCC 43644 10155711 YP_004178726.1 CDS Isop_1593 NC_014962.1 2310206 2310526 R COGs: COG0261 Ribosomal protein L21; InterPro IPR001787: IPR018258; KEGG: psl:Psta_2437 ribosomal protein L21; PFAM: ribosomal protein L21; SPTR: 50S ribosomal protein L21; TIGRFAM: ribosomal protein L21; PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21; 50S ribosomal protein L21 complement(2310206..2310526) Isosphaera pallida ATCC 43644 10155712 YP_004178727.1 CDS Isop_1594 NC_014962.1 2311003 2311926 D COGs: COG0052 Ribosomal protein S2; InterPro IPR001865: IPR018130: IPR005706; KEGG: psl:Psta_0952 ribosomal protein S2; PFAM: ribosomal protein S2; SPTR: Ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; 30S ribosomal protein S2P 2311003..2311926 Isosphaera pallida ATCC 43644 10155713 YP_004178728.1 CDS Isop_1595 NC_014962.1 2312362 2313288 D COGs: COG0264 Translation elongation factor Ts; InterPro IPR001816: IPR018101: IPR014039; KEGG: ele:Elen_1104 translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B dimerisation; SPTR: Elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: Elongation factor TS; TIGRFAM: translation elongation factor Ts; translation elongation factor Ts 2312362..2313288 Isosphaera pallida ATCC 43644 10155714 YP_004178729.1 CDS Isop_1596 NC_014962.1 2313698 2314483 D COGs: COG0528 Uridylate kinase; InterPro IPR015963: IPR011817: IPR001048; KEGG: psl:Psta_0954 uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; SPTR: Uridylate kinase; TIGRFAM: uridylate kinase; PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase; uridylate kinase 2313698..2314483 Isosphaera pallida ATCC 43644 10155715 YP_004178730.1 CDS Isop_1597 NC_014962.1 2314618 2315178 D COGs: COG0233 Ribosome recycling factor; InterPro IPR015998: IPR002661; KEGG: plm:Plim_3273 ribosome recycling factor; PFAM: ribosome recycling factor; SPTR: Ribosome-recycling factor; TIGRFAM: ribosome recycling factor; PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor; ribosome recycling factor 2314618..2315178 Isosphaera pallida ATCC 43644 10155716 YP_004178731.1 CDS Isop_1598 NC_014962.1 2315934 2316518 D KEGG: sli:Slin_2345 oxidoreductase molybdopterin binding protein; SPTR: Oxidoreductase molybdopterin binding protein; PFAM: Oxidoreductase molybdopterin binding domain; hypothetical protein 2315934..2316518 Isosphaera pallida ATCC 43644 10155718 YP_004178732.1 CDS Isop_1599 NC_014962.1 2316592 2317578 D InterPro IPR001120: IPR012902; KEGG: plm:Plim_4074 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 2316592..2317578 Isosphaera pallida ATCC 43644 10155719 YP_004178733.1 CDS Isop_1600 NC_014962.1 2318176 2319030 D KEGG: plm:Plim_3406 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2318176..2319030 Isosphaera pallida ATCC 43644 10155721 YP_004178734.1 CDS Isop_1601 NC_014962.1 2319470 2322595 D COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017441: IPR008271: IPR020635: IPR 002290: IPR017442: IPR010432; KEGG: rba:RB7928 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; RDD domain containing protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain; RDD family; serine/threonine protein kinase 2319470..2322595 Isosphaera pallida ATCC 43644 10155722 YP_004178735.1 CDS Isop_1602 NC_014962.1 2322917 2323267 D KEGG: psp:PSPPH_1090 ribosomal subunit interface protein, putative; SPTR: Ribosomal subunit interface protein, putative; PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; ribosomal subunit interface protein 2322917..2323267 Isosphaera pallida ATCC 43644 10155723 YP_004178736.1 CDS Isop_1603 NC_014962.1 2323413 2327099 R InterPro IPR018480; KEGG: mar:MAE_61060 hyalin repeat-containing protein; SPTR: Hyalin repeat protein; hypothetical protein complement(2323413..2327099) Isosphaera pallida ATCC 43644 10155724 YP_004178737.1 CDS Isop_1604 NC_014962.1 2327611 2329632 R KEGG: plm:Plim_3407 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2327611..2329632) Isosphaera pallida ATCC 43644 10155725 YP_004178738.1 CDS Isop_1605 NC_014962.1 2329932 2331926 R KEGG: yli:YALI0C22924g YALI0C22924p; SPTR: YALI0C22924p; hypothetical protein complement(2329932..2331926) Isosphaera pallida ATCC 43644 10155726 YP_004178739.1 CDS Isop_1606 NC_014962.1 2332397 2332900 D KEGG: cwo:Cwoe_0044 helix-turn-helix type 11 domain protein; SPTR: Helix-turn-helix type 11 domain protein; hypothetical protein 2332397..2332900 Isosphaera pallida ATCC 43644 10155727 YP_004178740.1 CDS Isop_1607 NC_014962.1 2333540 2334355 R KEGG: hor:Hore_13760 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2333540..2334355) Isosphaera pallida ATCC 43644 10155728 YP_004178741.1 CDS Isop_1608 NC_014962.1 2334877 2338305 D InterProIPR003961: IPR005084: IPR018247: IPR006626: IPR 006584: IPR011459; KEGG: sco:SCO7170 secreted sugar hydrolase; PFAM: Carbohydrate binding family 6; protein of unknown function DUF1565; Fibronectin type III domain protein; SMART: cellulose binding type IV; Parallel beta-helix repeat; Fibronectin type III domain protein; SPTR: Carbohydrate binding family 6; PFAM: Carbohydrate binding module (family 6); Fibronectin type III domain; carbohydrate-binding family 6 2334877..2338305 Isosphaera pallida ATCC 43644 10155729 YP_004178742.1 CDS Isop_1609 NC_014962.1 2338470 2339201 D KEGG: fal:FRAAL6628 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2338470..2339201 Isosphaera pallida ATCC 43644 10155730 YP_004178743.1 CDS Isop_1610 NC_014962.1 2339302 2341134 R COGs: COG1217 membrane GTPase involved in stress response; InterProIPR000795: IPR005225: IPR006298: IPR004161: IPR 000640; KEGG: plm:Plim_1239 GTP-binding protein TypA; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein; SPTR: GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain; GTP-binding protein TypA complement(2339302..2341134) Isosphaera pallida ATCC 43644 10155731 YP_004178744.1 CDS Isop_1611 NC_014962.1 2341400 2342605 R KEGG: sus:Acid_2658 neuraminidase (sialidase)-like protein; SPTR: Neuraminidase (Sialidase)-like protein; PFAM: BNR/Asp-box repeat; neuraminidase (sialidase)-like protein complement(2341400..2342605) Isosphaera pallida ATCC 43644 10155732 YP_004178745.1 CDS Isop_1612 NC_014962.1 2343073 2343210 R hypothetical protein complement(2343073..2343210) Isosphaera pallida ATCC 43644 10155733 YP_004178746.1 CDS Isop_1613 NC_014962.1 2343493 2343918 D KEGG: gob:Gobs_5081 glycoprotein; SPTR: Glycoprotein; hypothetical protein 2343493..2343918 Isosphaera pallida ATCC 43644 10155734 YP_004178747.1 CDS Isop_1614 NC_014962.1 2344101 2349125 R InterPro IPR006118: IPR003644; KEGG: mpd:MCP_2796 hypothetical protein; PFAM: Na-Ca exchanger/integrin-beta4; SMART: Na-Ca exchanger/integrin-beta4; SPTR: Probable aggregation factor core protein MAFp3, isoform C; PFAM: Calx-beta domain; Na-Ca exchanger/integrin-beta4 complement(2344101..2349125) Isosphaera pallida ATCC 43644 10155735 YP_004178748.1 CDS Isop_1615 NC_014962.1 2349712 2350782 R COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: amr:AM1_G0129 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family; NAD-dependent epimerase/dehydratase complement(2349712..2350782) Isosphaera pallida ATCC 43644 10155736 YP_004178749.1 CDS Isop_1616 NC_014962.1 2350967 2352271 R KEGG: cja:CJA_3342 nucleoside-transport system protein; SPTR: Nucleoside:H symporter; PFAM: Nucleoside H+ symporter; TIGRFAM: nucleoside transporter; hypothetical protein complement(2350967..2352271) Isosphaera pallida ATCC 43644 10155737 YP_004178750.1 CDS Isop_1617 NC_014962.1 2352459 2353952 R InterPro IPR018506; KEGG: rba:RB6867 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1570); hypothetical protein complement(2352459..2353952) Isosphaera pallida ATCC 43644 10155738 YP_004178751.1 CDS Isop_1618 NC_014962.1 2353958 2355634 R InterPro IPR001128; KEGG: mrd:Mrad2831_3371 cytochrome P450; PFAM: cytochrome P450; SPTR: Cytochrome P450; PFAM: Cytochrome P450; cytochrome P450 complement(2353958..2355634) Isosphaera pallida ATCC 43644 10155739 YP_004178752.1 CDS Isop_1619 NC_014962.1 2356337 2358937 D KEGG: cre:CHLREDRAFT_10029 fibrocystin-L-like protein; SPTR: Minus agglutinin; hypothetical protein 2356337..2358937 Isosphaera pallida ATCC 43644 10155740 YP_004178753.1 CDS Isop_1620 NC_014962.1 2359283 2361814 D COGs: COG2409 drug exporter of the RND superfamily; InterPro IPR010916; KEGG: plm:Plim_0066 MmpL domain protein; SPTR: Probable membrane protein-putative transporter; PFAM: MMPL family; hypothetical protein 2359283..2361814 Isosphaera pallida ATCC 43644 10155741 YP_004178754.1 CDS Isop_1621 NC_014962.1 2362005 2363201 D COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004838: IPR004839; KEGG: sfu:Sfum_0054 aminotransferase, class I and II; PFAM: aminotransferase class I and II; SPTR: LL-diaminopimelate aminotransferase; PFAM: Aminotransferase class I and II; LL-diaminopimelate aminotransferase apoenzyme 2362005..2363201 Isosphaera pallida ATCC 43644 10155742 YP_004178755.1 CDS Isop_1622 NC_014962.1 2363316 2364197 D COGs: COG0801 7 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; InterPro IPR000550; KEGG: psl:Psta_2023 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; SPTR:2-amino-4-hydroxy-6-hydroxymethyldihydropterid inepyrophosphokinase; TIGRFAM:2-amino-4-hydroxy-6-hydroxymethyldihydropte ridinepyrophosphokinase; PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 2363316..2364197 Isosphaera pallida ATCC 43644 10155743 YP_004178756.1 CDS Isop_1623 NC_014962.1 2364383 2365228 D COGs: COG1349 Transcriptional regulators of sugar metabolism; InterPro IPR001034: IPR018356: IPR014036; KEGG: psl:Psta_3278 transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; SPTR: Transcriptional regulator, DeoR family; PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain; DeoR family transcriptional regulator 2364383..2365228 Isosphaera pallida ATCC 43644 10155744 YP_004178757.1 CDS Isop_1624 NC_014962.1 2365225 2365947 D COGs: COG4869 Propanediol utilization protein; InterPro IPR008300; KEGG: plm:Plim_1757 propanediol utilization protein; PFAM: Propanediol utilization protein; SPTR: Propanediol utilization protein; PFAM: Propanediol utilisation protein PduL; propanediol utilization protein 2365225..2365947 Isosphaera pallida ATCC 43644 10155745 YP_004178758.1 CDS Isop_1625 NC_014962.1 2366065 2366361 D COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR020808: IPR000249; KEGG: psl:Psta_3280 microcompartments protein; PFAM: microcompartments protein; SPTR: Microcompartments protein; PFAM: BMC domain; microcompartments protein 2366065..2366361 Isosphaera pallida ATCC 43644 10155746 YP_004178759.1 CDS Isop_1626 NC_014962.1 2366365 2366703 D COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR020808: IPR000249; KEGG: psl:Psta_3281 microcompartments protein; PFAM: microcompartments protein; SPTR: Ethanolamine utilization protein; PFAM: BMC domain; microcompartments protein 2366365..2366703 Isosphaera pallida ATCC 43644 10155747 YP_004178760.1 CDS Isop_1627 NC_014962.1 2366817 2367095 D COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249; KEGG: psl:Psta_3281 microcompartments protein; PFAM: microcompartments protein; SPTR: Putative uncharacterized protein; PFAM: BMC domain; microcompartments protein 2366817..2367095 Isosphaera pallida ATCC 43644 10155748 YP_004178761.1 CDS Isop_1628 NC_014962.1 2367219 2368430 D COGs: COG0282 Acetate kinase; InterPro IPR000890: IPR004372; KEGG: psl:Psta_3282 acetate kinase; PFAM: acetate and butyrate kinase; SPTR: Acetate kinase; TIGRFAM: acetate kinase; PFAM: Acetokinase family; TIGRFAM: acetate kinase; acetate kinase 2367219..2368430 Isosphaera pallida ATCC 43644 10155749 YP_004178762.1 CDS Isop_1629 NC_014962.1 2368468 2368773 D COGs: COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR004992; KEGG: psl:Psta_3283 ethanolamine utilization protein EutN/carboxysome structural protein CcmL; PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; SPTR: Probable ethanolamine utilization protein EutN; PFAM: Ethanolamine utilisation protein EutN/carboxysome; ethanolamine utilization protein EutN/carboxysome structural protein Ccml 2368468..2368773 Isosphaera pallida ATCC 43644 10155750 YP_004178763.1 CDS Isop_1630 NC_014962.1 2368938 2370362 D COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR012408: IPR015590; KEGG: plm:Plim_1751 aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: Ethanolamine utilization protein EutE; PFAM: Aldehyde dehydrogenase family; aldehyde dehydrogenase 2368938..2370362 Isosphaera pallida ATCC 43644 10155751 YP_004178764.1 CDS Isop_1631 NC_014962.1 2370420 2370725 D COGs: COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR004992; KEGG: plm:Plim_1750 ethanolamine utilization protein EutN/carboxysome structural protein CcmL; PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; SPTR: Putative uncharacterized protein; PFAM: Ethanolamine utilisation protein EutN/carboxysome; ethanolamine utilization protein EutN/carboxysome structural protein Ccml 2370420..2370725 Isosphaera pallida ATCC 43644 10155752 YP_004178765.1 CDS Isop_1632 NC_014962.1 2370752 2371054 D KEGG: psl:Psta_3287 ethanolamine utilization protein EutN/carboxysome structural protein CcmL; SPTR: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; PFAM: Ethanolamine utilisation protein EutN/carboxysome; ethanolamine utilization protein EutN/carboxysome structural protein CcmL 2370752..2371054 Isosphaera pallida ATCC 43644 10155753 YP_004178766.1 CDS Isop_1633 NC_014962.1 2371135 2372127 D COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: plm:Plim_1747 class II aldolase/adducin family protein; PFAM: class II aldolase/adducin family protein; SPTR: Class II aldolase/adducin family protein; PFAM: Class II Aldolase and Adducin N-terminal domain; class II aldolase/adducin family protein 2371135..2372127 Isosphaera pallida ATCC 43644 10155754 YP_004178767.1 CDS Isop_1634 NC_014962.1 2372129 2373178 D COGs: COG0039 Malate/lactate dehydrogenase; InterPro IPR001557: IPR018177: IPR001236; KEGG: psl:Psta_3289 lactate/malate dehydrogenase; PFAM: Lactate/malate dehydrogenase; SPTR: L-lactate dehydrogenase; PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; malate dehydrogenase (NAD) 2372129..2373178 Isosphaera pallida ATCC 43644 10155755 YP_004178768.1 CDS Isop_1635 NC_014962.1 2373298 2374632 D KEGG: ote:Oter_4087 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2373298..2374632 Isosphaera pallida ATCC 43644 10155756 YP_004178769.1 CDS Isop_1636 NC_014962.1 2374879 2375307 D KEGG: azl:AZL_b00450 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2374879..2375307 Isosphaera pallida ATCC 43644 10155757 YP_004178770.1 CDS Isop_1637 NC_014962.1 2375568 2378258 D COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR019782: IPR017986: IPR020472: IPR 017441: IPR008271: IPR019775: IPR020635: IPR002290: IPR001680:I PR017442: IPR019781; KEGG: tcu:Tcur_0419 serine/threonine protein kinase with WD40 repeats; PFAM: Serine/threonine-protein kinase-like domain; WD40 repeat, subgroup; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; WD-40 repeat-containing protein; SPTR: Serine/threonine protein kinase with WD40 repeats; PFAM: Protein kinase domain; WD domain, G-beta repeat; WD40 repeat-containing serine/threonine protein kinase 2375568..2378258 Isosphaera pallida ATCC 43644 10155758 YP_004178771.1 CDS Isop_1638 NC_014962.1 2378498 2380966 D COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR019782: IPR017986: IPR017441: IPR 008271: IPR020635: IPR002290: IPR001680: IPR017442: IPR019781; KEGG: sro:Sros_7190 WD40 repeat-domain-containing protein-like protein; PFAM: Serine/threonine-protein kinase-like domain; WD40 repeat, subgroup; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; WD-40 repeat-containing protein; SPTR: WD40 repeat-domain-containing protein-like protein; PFAM: Protein kinase domain; WD domain, G-beta repeat; WD40 repeat-containing serine/threonine protein kinase 2378498..2380966 Isosphaera pallida ATCC 43644 10155759 YP_004178772.1 CDS Isop_1639 NC_014962.1 2381522 2382850 D COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: rca:Rcas_0781 glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; PRIAM: Glutamine--scyllo-inositol transaminase; SPTR: Glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; glutamine--scyllo-inositol transaminase 2381522..2382850 Isosphaera pallida ATCC 43644 10155760 YP_004178773.1 CDS Isop_1640 NC_014962.1 2383108 2384508 D COGs: COG1194 A/G-specific DNA glycosylase; InterPro IPR004036: IPR003265: IPR003651; KEGG: plm:Plim_3349 A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; SMART: HhH-GPD family protein; SPTR: A/G-specific adenine glycosylase; PFAM: HhH-GPD superfamily base excision DNA repair protein; TIGRFAM: A/G-specific adenine glycosylase; HhH-GPD family protein 2383108..2384508 Isosphaera pallida ATCC 43644 10155761 YP_004178774.1 CDS Isop_1641 NC_014962.1 2384707 2385162 D COGs: COG0105 Nucleoside diphosphate kinase; InterPro IPR001564; KEGG: abi:Aboo_1239 nucleoside-diphosphate kinase; PFAM: nucleoside diphosphate kinase; PRIAM: Nucleoside-diphosphate kinase; SMART: nucleoside diphosphate kinase; SPTR: Nucleoside diphosphate kinase; PFAM: Nucleoside diphosphate kinase; nucleoside diphosphate kinase 2384707..2385162 Isosphaera pallida ATCC 43644 10155762 YP_004178775.1 CDS Isop_1642 NC_014962.1 2385554 2387047 R KEGG: psl:Psta_3854 protein of unknown function DUF1570; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1570); hypothetical protein complement(2385554..2387047) Isosphaera pallida ATCC 43644 10155764 YP_004178776.1 CDS Isop_1643 NC_014962.1 2387206 2387580 R COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: nmi:NMO_0284 rhodanese-related sulfur transferase; SMART: Rhodanese domain protein; SPTR: Rhodanese domain protein; PFAM: Rhodanese-like domain; rhodanese domain-containing protein complement(2387206..2387580) Isosphaera pallida ATCC 43644 10155765 YP_004178777.1 CDS Isop_1644 NC_014962.1 2388325 2391720 R InterPro IPR001478; KEGG: rmr:Rmar_0910 glycosyl hydrolase BNR repeat-containing protein; PFAM: PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: Glycosyl hydrolase BNR repeat-containing protein; PFAM: BNR/Asp-box repeat; PDZ/DHR/GLGF domain-containing protein complement(2388325..2391720) Isosphaera pallida ATCC 43644 10155766 YP_004178778.1 CDS Isop_1645 NC_014962.1 2392125 2394245 R COGs: COG0480 Translation elongation factors (GTPase); InterProIPR000795: IPR004540: IPR005225: IPR004161: IPR 005517: IPR000640; KEGG: sti:Sthe_1033 translation elongation factor G; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain-containing protein; SPTR: Strongly similar to translation elongation factor EF-G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; translation elongation factor 2 (EF-2/EF-G) complement(2392125..2394245) Isosphaera pallida ATCC 43644 10155767 YP_004178779.1 CDS Isop_1646 NC_014962.1 2394489 2395349 R COGs: COG4712 conserved hypothetical protein; InterPro IPR001012; KEGG: msv:Mesil_2611 Rad52/22 double-strand break repair protein; PFAM: UBX; SPTR: Rad52/22 double-strand break repair protein; PFAM: Rad52/22 family double-strand break repair protein; double-strand break repair protein complement(2394489..2395349) Isosphaera pallida ATCC 43644 10155768 YP_004178780.1 CDS Isop_1647 NC_014962.1 2395630 2396895 R COGs: COG3429 Glucose-6-P dehydrogenase subunit; InterPro IPR019297; KEGG: rrs:RoseRS_2561 glucose-6-P dehydrogenase subunit-like protein; PFAM: Glucose-6-phosphate dehydrogenase subunit; SPTR: Glucose-6-P dehydrogenase subunit-like protein; PFAM: Glucose-6-phosphate dehydrogenase subunit; glucose-6-phosphate dehydrogenase subunit complement(2395630..2396895) Isosphaera pallida ATCC 43644 10155769 YP_004178781.1 CDS Isop_1648 NC_014962.1 2396908 2398899 R KEGG: psl:Psta_2467 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2396908..2398899) Isosphaera pallida ATCC 43644 10155770 YP_004178782.1 CDS Isop_1649 NC_014962.1 2399380 2399817 D InterPro IPR007922; KEGG: psl:Psta_1043 protein of unknown function DUF721; PFAM: protein of unknown function DUF721; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF721); hypothetical protein 2399380..2399817 Isosphaera pallida ATCC 43644 10155771 YP_004178783.1 CDS Isop_1650 NC_014962.1 2400201 2402870 D COGs: COG0187 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit; InterProIPR000565: IPR001241: IPR018522: IPR003594: IPR 013506: IPR002288; KEGG: psl:Psta_1044 DNA gyrase, B subunit; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; DNA gyrase subunit B domain protein; SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; SPTR: DNA gyrase subunit B; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit; DNA topoisomerase type IIA subunit B domain-containing protein 2400201..2402870 Isosphaera pallida ATCC 43644 10155772 YP_004178784.1 CDS Isop_1651 NC_014962.1 2403865 2409603 D COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family; InterProIPR007527: IPR014021: IPR001650: IPR014001: IPR 000330; KEGG: sus:Acid_3907 SNF2-related protein; PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: SNF2-related protein; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain; SWIM zinc finger; SNF2-like protein 2403865..2409603 Isosphaera pallida ATCC 43644 10155773 YP_004178785.1 CDS Isop_1652 NC_014962.1 2409744 2411102 R KEGG: psl:Psta_2349 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2409744..2411102) Isosphaera pallida ATCC 43644 10155774 YP_004178786.1 CDS Isop_1653 NC_014962.1 2411396 2412394 D COGs: COG1408 phosphohydrolase; InterPro IPR006311: IPR004843; KEGG: zpr:ZPR_1393 calcineurin-like phosphoesterase; PFAM: metallophosphoesterase; SPTR: Calcineurin-like phosphoesterase; PFAM: Calcineurin-like phosphoesterase; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; metallophosphoesterase 2411396..2412394 Isosphaera pallida ATCC 43644 10155775 YP_004178787.1 CDS Isop_1654 NC_014962.1 2412557 2416195 R COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR000834: IPR002469; KEGG: sus:Acid_5302 peptidase S9B dipeptidylpeptidase IV subunit; PFAM: peptidase S9B dipeptidylpeptidase IV domain protein; peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; SPTR: Peptidase S9B, dipeptidylpeptidase IV domain protein; PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region; Zinc carboxypeptidase; peptidase S9B dipeptidylpeptidase IV domain-containing protein complement(2412557..2416195) Isosphaera pallida ATCC 43644 10155776 YP_004178788.1 CDS Isop_1655 NC_014962.1 2416589 2419813 R COGs: COG0342 Preprotein translocase subunit SecD; InterPro IPR003335: IPR005791: IPR005665; KEGG: plm:Plim_1349 protein-export membrane protein SecD; PFAM: SecD/SecF/SecDF export membrane protein; SPTR: Protein-export membrane protein secD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; protein-export membrane protein SecD complement(2416589..2419813) Isosphaera pallida ATCC 43644 10155777 YP_004178789.1 CDS Isop_1656 NC_014962.1 2420034 2420441 R COGs: COG1862 Preprotein translocase subunit YajC; InterPro IPR003849; KEGG: cpb:Cphamn1_2348 preprotein translocase, YajC subunit; PFAM: YajC family protein; SPTR: Putative uncharacterized protein; TIGRFAM: preprotein translocase, YajC subunit; PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit; preprotein translocase subunit YajC complement(2420034..2420441) Isosphaera pallida ATCC 43644 10155778 YP_004178790.1 CDS Isop_1657 NC_014962.1 2420725 2421903 R COGs: COG0343 Queuine/archaeosine tRNA-ribosyltransferase; InterPro IPR004803: IPR002616; KEGG: plm:Plim_1347 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; PRIAM: tRNA-guanine transglycosylase; SPTR: Queuine tRNA-ribosyltransferase; TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming; tRNA-guanine transglycosylase complement(2420725..2421903) Isosphaera pallida ATCC 43644 10155779 YP_004178791.1 CDS Isop_1658 NC_014962.1 2421896 2423242 R COGs: COG0202 DNA-directed RNA polymerase alpha subunit/40 kD subunit; InterPro IPR019734: IPR013026: IPR011260: IPR001440; KEGG: psl:Psta_3991 RNA polymerase alpha subunit domain protein; PFAM: RNA polymerase alpha subunit domain protein; Tetratricopeptide TPR_1 repeat-containing protein; SPTR: RNA polymerase alpha subunit domain protein; PFAM: Tetratricopeptide repeat; Bacterial RNA polymerase, alpha chain C terminal domain; RNA polymerase subunit alpha domain-containing protein complement(2421896..2423242) Isosphaera pallida ATCC 43644 10155780 YP_004178792.1 CDS Isop_1659 NC_014962.1 2423428 2424660 R KEGG: yli:YALI0E22572g YALI0E22572p; SPTR: LysM domain protein; hypothetical protein complement(2423428..2424660) Isosphaera pallida ATCC 43644 10155781 YP_004178793.1 CDS Isop_1660 NC_014962.1 2425132 2427558 D COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR008271: IPR020635: IPR002290: IPR 017442; KEGG: plm:Plim_3456 serine/threonine protein kinase-related protein; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase-related protein; PFAM: Protein kinase domain; serine/threonine protein kinase 2425132..2427558 Isosphaera pallida ATCC 43644 10155782 YP_004178794.1 CDS Isop_1661 NC_014962.1 2427977 2428717 R KEGG: psl:Psta_0447 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2427977..2428717) Isosphaera pallida ATCC 43644 10155783 YP_004178795.1 CDS Isop_1662 NC_014962.1 2429100 2430410 R InterPro IPR000297; KEGG: plm:Plim_3331 PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SPTR: Probable peptidyl-prolyl cis-trans isomerase; PFAM: PPIC-type PPIASE domain; PpiC-type peptidyl-prolyl cis-trans isomerase complement(2429100..2430410) Isosphaera pallida ATCC 43644 10155784 YP_004178796.1 CDS Isop_1663 NC_014962.1 2431083 2432147 D InterPro IPR001120: IPR012902; KEGG: plm:Plim_2840 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 2431083..2432147 Isosphaera pallida ATCC 43644 10155785 YP_004178797.1 CDS Isop_1664 NC_014962.1 2432300 2432746 R KEGG: pna:Pnap_4853 signal peptide prediction; SPTR: Putative uncharacterized protein; hypothetical protein complement(2432300..2432746) Isosphaera pallida ATCC 43644 10155786 YP_004178798.1 CDS Isop_1665 NC_014962.1 2432959 2433729 R KEGG: gau:GAU_1101 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2432959..2433729) Isosphaera pallida ATCC 43644 10155787 YP_004178799.1 CDS Isop_1666 NC_014962.1 2433959 2435398 R COGs: COG0793 Periplasmic protease; InterPro IPR001478: IPR005151; KEGG: gau:GAU_1102 peptidase S41A family protein; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; SPTR: Peptidase S41A family protein; PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); peptidase S41 complement(2433959..2435398) Isosphaera pallida ATCC 43644 10155788 YP_004178800.1 CDS Isop_1667 NC_014962.1 2435691 2436134 D COGs: COG0432 conserved hypothetical protein; InterPro IPR018356: IPR001602; KEGG: hoh:Hoch_6559 protein of unknown function UPF0047; PFAM: protein of unknown function UPF0047; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme; hypothetical protein 2435691..2436134 Isosphaera pallida ATCC 43644 10155789 YP_004178801.1 CDS Isop_1668 NC_014962.1 2436181 2437587 R KEGG: psl:Psta_1715 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Neutral/alkaline non-lysosomal ceramidase; hypothetical protein complement(2436181..2437587) Isosphaera pallida ATCC 43644 10155790 YP_004178802.1 CDS Isop_1669 NC_014962.1 2437716 2438576 D COGs: COG0340 Biotin-(acetyl-CoA carboxylase) ligase; InterPro IPR004408: IPR004143; KEGG: hne:HNE_1759 biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; SPTR: Biotin [acetyl-CoA-carboxylase] ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region; biotin--acetyl-CoA-carboxylase ligase 2437716..2438576 Isosphaera pallida ATCC 43644 10155791 YP_004178803.1 CDS Isop_1670 NC_014962.1 2438653 2438853 R KEGG: nth:Nther_2175 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2438653..2438853) Isosphaera pallida ATCC 43644 10155792 YP_004178804.1 CDS Isop_1671 NC_014962.1 2439482 2440177 D KEGG: gga:422595 lin-54 homolog (C. elegans); SPTR: Putative uncharacterized protein; hypothetical protein 2439482..2440177 Isosphaera pallida ATCC 43644 10155793 YP_004178805.1 CDS Isop_1672 NC_014962.1 2440371 2441495 D InterPro IPR001120: IPR012902; KEGG: rba:RB1052 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 2440371..2441495 Isosphaera pallida ATCC 43644 10155794 YP_004178806.1 CDS Isop_1673 NC_014962.1 2441683 2442675 R COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: plm:Plim_0256 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter, ATP-binding protein; PFAM: ABC transporter; ABC transporter-like protein complement(2441683..2442675) Isosphaera pallida ATCC 43644 10155795 YP_004178807.1 CDS Isop_1674 NC_014962.1 2442828 2445104 R KEGG: psl:Psta_2902 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2442828..2445104) Isosphaera pallida ATCC 43644 10155796 YP_004178808.1 CDS Isop_1675 NC_014962.1 2445227 2445589 R InterPro IPR004518; KEGG: psl:Psta_2903 MazG nucleotide pyrophosphohydrolase; PFAM: MazG nucleotide pyrophosphohydrolase; SPTR: MazG nucleotide pyrophosphohydrolase; PFAM: MazG nucleotide pyrophosphohydrolase domain; MazG nucleotide pyrophosphohydrolase complement(2445227..2445589) Isosphaera pallida ATCC 43644 10155797 YP_004178809.1 CDS Isop_1676 NC_014962.1 2445825 2446379 R COGs: COG0521 Molybdopterin biosynthesis protein; InterPro IPR008284: IPR020817: IPR001453; KEGG: pca:Pcar_2074 molybdenum cofactor biosynthesis protein; PFAM: molybdopterin binding domain; SPTR: Molybdenum cofactor biosynthesis mog; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain; molybdopterin adenylyltransferase complement(2445825..2446379) Isosphaera pallida ATCC 43644 10155798 YP_004178810.1 CDS Isop_1677 NC_014962.1 2446397 2447800 R COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mxa:MXAN_1031 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase complement(2446397..2447800) Isosphaera pallida ATCC 43644 10155799 YP_004178811.1 CDS Isop_1678 NC_014962.1 2447932 2450151 R COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017441: IPR008271: IPR020635: IPR 002290: IPR017442; KEGG: plm:Plim_1535 serine/threonine protein kinase-related protein; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase-related protein; PFAM: Protein kinase domain; serine/threonine protein kinase complement(2447932..2450151) Isosphaera pallida ATCC 43644 10155800 YP_004178812.1 CDS Isop_1679 NC_014962.1 2450508 2452019 R COGs: COG1117 ABC-type phosphate transport system ATPase component; InterProIPR000387: IPR003439: IPR017871: IPR016130: IPR 003593: IPR003595: IPR000340; KEGG: dac:Daci_1595 ABC transporter related; PFAM: ABC transporter related; Dual specificity protein phosphatase; SMART: AAA ATPase; Protein-tyrosine phosphatase, catalytic; SPTR: ABC transporter related; PFAM: ABC transporter; Dual specificity phosphatase, catalytic domain; ABC transporter-like protein complement(2450508..2452019) Isosphaera pallida ATCC 43644 10155801 YP_004178813.1 CDS Isop_1680 NC_014962.1 2452267 2453322 R COGs: COG0515 Serine/threonine protein kinase; InterPro IPR000719: IPR020635: IPR002290: IPR017442; KEGG: scl:sce9150 protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Protein kinase; PFAM: Protein kinase domain; serine/threonine protein kinase complement(2452267..2453322) Isosphaera pallida ATCC 43644 10155802 YP_004178814.1 CDS Isop_1681 NC_014962.1 2453914 2454672 R InterPro IPR013216; KEGG: gsu:GSU0628 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: Conserved domain protein; PFAM: Methyltransferase domain; type 11 methyltransferase complement(2453914..2454672) Isosphaera pallida ATCC 43644 10155803 YP_004178815.1 CDS Isop_1682 NC_014962.1 2454984 2455649 R InterPro IPR020084: IPR000086; KEGG: chu:CHU_2826 pyrophosphohydrolase related protein; PFAM: NUDIX hydrolase; SPTR: Pyrophosphohydrolase related protein; PFAM: NUDIX domain; NUDIX hydrolase complement(2454984..2455649) Isosphaera pallida ATCC 43644 10155804 YP_004178816.1 CDS Isop_1683 NC_014962.1 2455663 2456547 R COGs: COG0074 Succinyl-CoA synthetase alpha subunit; InterPro IPR005810: IPR017440: IPR003781: IPR005811; KEGG: mxa:MXAN_3542 succinyl-CoA synthetase, alpha subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding domain protein; SPTR: Succinyl-CoA ligase [ADP-forming] subunit alpha; TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA binding domain; CoA-ligase; TIGRFAM: succinyl-CoA synthetase, alpha subunit; succinyl-CoA synthetase subunit alpha complement(2455663..2456547) Isosphaera pallida ATCC 43644 10155805 YP_004178817.1 CDS Isop_1684 NC_014962.1 2456702 2457970 R COGs: COG0045 Succinyl-CoA synthetase beta subunit; InterPro IPR005809: IPR017866: IPR013650: IPR005811; KEGG: rba:RB10617 succinyl-CoA synthetase (beta subunit); PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase; PRIAM: Succinate--CoA ligase (ADP-forming); SPTR: Succinyl-CoA ligase [ADP-forming] subunit beta; TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: CoA-ligase; ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase, beta subunit; succinyl-CoA synthetase subunit beta complement(2456702..2457970) Isosphaera pallida ATCC 43644 10155806 YP_004178818.1 CDS Isop_1685 NC_014962.1 2458576 2459763 R COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: psl:Psta_1640 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Putative glycosyl transferase; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase complement(2458576..2459763) Isosphaera pallida ATCC 43644 10155807 YP_004178819.1 CDS Isop_1686 NC_014962.1 2459816 2462386 R COGs: COG0421 Spermidine synthase; InterPro IPR001045; KEGG: kfl:Kfla_1557 spermine synthase; PFAM: Spermine synthase; SPTR: Spermine synthase; PFAM: Spermine/spermidine synthase; spermine synthase complement(2459816..2462386) Isosphaera pallida ATCC 43644 10155808 YP_004178820.1 CDS Isop_1687 NC_014962.1 2462548 2463678 R COGs: COG0628 permease; InterPro IPR002549; KEGG: hoh:Hoch_2065 protein of unknown function UPF0118; PFAM: protein of unknown function UPF0118; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF20; hypothetical protein complement(2462548..2463678) Isosphaera pallida ATCC 43644 10155809 YP_004178821.1 CDS Isop_1688 NC_014962.1 2464206 2466305 D COGs: COG0323 DNA mismatch repair enzyme (predicted ATPase); InterProIPR020667: IPR014762: IPR014763: IPR003594: IPR 013507: IPR014790; KEGG: plm:Plim_1838 DNA mismatch repair protein MutL; PFAM: MutL dimerisation; DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein; SPTR: DNA mismatch repair protein MutL; TIGRFAM: DNA mismatch repair protein MutL; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; MutL C terminal dimerisation domain; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL; DNA mismatch repair protein MutL 2464206..2466305 Isosphaera pallida ATCC 43644 10155810 YP_004178822.1 CDS Isop_1689 NC_014962.1 2466373 2467236 R COGs: COG1521 Putative transcriptional regulator protein; InterPro IPR004619; KEGG: psl:Psta_1900 putative transcriptional acitvator, Baf family; PFAM: Bvg accessory factor; SPTR: Putative uncharacterized protein; TIGRFAM: transcriptional activator, Baf family; PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III; putative Baf family transcriptional acitvator complement(2466373..2467236) Isosphaera pallida ATCC 43644 10155811 YP_004178823.1 CDS Isop_1690 NC_014962.1 2467233 2468453 R COGs: COG0536 GTPase; InterProIPR006073: IPR006074: IPR014100: IPR006169: IPR 002917; KEGG: psl:Psta_1899 GTP-binding protein Obg/CgtA; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related; SPTR: GTP-binding protein Obg/CgtA; TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTPase of unknown function; GTP1/OBG; TIGRFAM: Obg family GTPase CgtA; small GTP-binding protein domain; GTP-binding protein Obg/CgtA complement(2467233..2468453) Isosphaera pallida ATCC 43644 10155812 YP_004178824.1 CDS Isop_1691 NC_014962.1 2468995 2469252 R COGs: COG0211 Ribosomal protein L27; InterPro IPR001684: IPR018261; KEGG: plm:Plim_0238 ribosomal protein L27; PFAM: ribosomal protein L27; SPTR: 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27; 50S ribosomal protein L27 complement(2468995..2469252) Isosphaera pallida ATCC 43644 10155813 YP_004178825.1 CDS Isop_1692 NC_014962.1 2469578 2470318 D COGs: COG0603 PP-loop superfamily ATPase; InterPro IPR004479: IPR018317; KEGG: azl:AZL_006140 queuosine biosynthesis protein; PFAM: Queuosine synthesis-like; SPTR: Queuosine biosynthesis protein; TIGRFAM: exsB protein; PFAM: ExsB; TIGRFAM: exsB protein; preQ(0) biosynthesis protein QueC 2469578..2470318 Isosphaera pallida ATCC 43644 10155814 YP_004178826.1 CDS Isop_1693 NC_014962.1 2470392 2470565 R hypothetical protein complement(2470392..2470565) Isosphaera pallida ATCC 43644 10155815 YP_004178827.1 CDS Isop_1694 NC_014962.1 2470659 2471495 D COGs: COG4886 Leucine-rich repeat (LRR) protein; InterPro IPR020474: IPR003591: IPR001611; KEGG: npu:Npun_F6039 Miro domain-containing protein; PFAM: leucine-rich repeat-containing protein; PRIAM: Adenylate cyclase; SPTR: Predicted protein; PFAM: Leucine Rich Repeat; adenylate cyclase 2470659..2471495 Isosphaera pallida ATCC 43644 10155816 YP_004178828.1 CDS Isop_1695 NC_014962.1 2471832 2472524 R COGs: COG1030 Membrane-bound serine protease (ClpP class); InterPro IPR002810; KEGG: psl:Psta_0480 protein of unknown function DUF107; PFAM: protein of unknown function DUF107; SPTR: Putative uncharacterized protein; PFAM: NfeD-like; hypothetical protein complement(2471832..2472524) Isosphaera pallida ATCC 43644 10155817 YP_004178829.1 CDS Isop_1696 NC_014962.1 2472793 2474946 R COGs: COG1030 Membrane-bound serine protease (ClpP class); InterPro IPR002810; KEGG: plm:Plim_0730 protein of unknown function DUF107; PFAM: protein of unknown function DUF107; SPTR: Putative uncharacterized protein; PFAM: NfeD-like; hypothetical protein complement(2472793..2474946) Isosphaera pallida ATCC 43644 10155818 YP_004178830.1 CDS Isop_1697 NC_014962.1 2475702 2477843 R KEGG: sus:Acid_0265 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2475702..2477843) Isosphaera pallida ATCC 43644 10155820 YP_004178831.1 CDS Isop_1698 NC_014962.1 2478367 2479326 D InterPro IPR003737; KEGG: nfa:nfa45970 hypothetical protein; PFAM: LmbE family protein; SPTR: Putative uncharacterized protein; PFAM: GlcNAc-PI de-N-acetylase; LmbE family protein 2478367..2479326 Isosphaera pallida ATCC 43644 10155821 YP_004178832.1 CDS Isop_R0025 NC_014962.1 2479491 2480318 D COGs: COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; InterPro IPR018321: IPR006148; KEGG: coc:Coch_2021 glucosamine-6-phosphate deaminase-like protein; PFAM: glucosamine/galactosamine-6-phosphate isomerase; SPTR: Glucosamine-6-phosphate isomerase; tmRNA as predicted by Rfam (RF00023), score 139.03; PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: glucosamine-6-phosphate isomerase; glucosamine/galactosamine-6-phosphate isomerase 2479491..2480318 Isosphaera pallida ATCC 43644 10155822 YP_004178833.1 CDS Isop_1700 NC_014962.1 2481797 2482480 D InterPro IPR013424: IPR011449; KEGG: neu:NE2239 hypothetical protein; PFAM: protein of unknown function DUF1555; SPTR: Probable aggregation factor core protein MAFp3, isoform C; PFAM: PEP-CTERM motif; TIGRFAM: PEP-CTERM putative exosortase interaction domain; hypothetical protein 2481797..2482480 Isosphaera pallida ATCC 43644 10155823 YP_004178834.1 CDS Isop_1701 NC_014962.1 2482664 2483689 R InterPro IPR019734: IPR013026; KEGG: gem:GM21_3832 TPR repeat-containing protein; SPTR: Serine/threonine protein kinase containing TPR domain; hypothetical protein complement(2482664..2483689) Isosphaera pallida ATCC 43644 10155824 YP_004178835.1 CDS Isop_1702 NC_014962.1 2483747 2485093 D COGs: COG3063 Tfp pilus assembly protein PilF; InterPro IPR019734: IPR013026: IPR001440; KEGG: cyp:PCC8801_1300 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: TPR repeat-containing protein; hypothetical protein 2483747..2485093 Isosphaera pallida ATCC 43644 10155825 YP_004178836.1 CDS Isop_1703 NC_014962.1 2485479 2485883 D KEGG: dac:Daci_1596 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2485479..2485883 Isosphaera pallida ATCC 43644 10155826 YP_004178837.1 CDS Isop_1704 NC_014962.1 2486057 2487565 R InterPro IPR017909: IPR010869; KEGG: psl:Psta_4556 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501); hypothetical protein complement(2486057..2487565) Isosphaera pallida ATCC 43644 10155827 YP_004178838.1 CDS Isop_1705 NC_014962.1 2487673 2490891 R InterPro IPR009056: IPR011444; KEGG: psl:Psta_4557 protein of unknown function DUF1549; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553); hypothetical protein complement(2487673..2490891) Isosphaera pallida ATCC 43644 10155828 YP_004178839.1 CDS Isop_1706 NC_014962.1 2491866 2493257 R InterPro IPR017909: IPR006311: IPR010869; KEGG: psl:Psta_1944 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501); hypothetical protein complement(2491866..2493257) Isosphaera pallida ATCC 43644 10155829 YP_004178840.1 CDS Isop_1707 NC_014962.1 2493629 2493892 R KEGG: tva:TVAG_204370 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2493629..2493892) Isosphaera pallida ATCC 43644 10155830 YP_004178841.1 CDS Isop_1708 NC_014962.1 2493951 2494778 R InterPro IPR003675; KEGG: rrs:RoseRS_1918 abortive infection protein; PFAM: Abortive infection protein; SPTR: Abortive infection protein; PFAM: CAAX amino terminal protease family; abortive infection protein complement(2493951..2494778) Isosphaera pallida ATCC 43644 10155831 YP_004178842.1 CDS Isop_1709 NC_014962.1 2495581 2496486 D KEGG: cyn:Cyan7425_0636 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Sulfotransferase domain; hypothetical protein 2495581..2496486 Isosphaera pallida ATCC 43644 10155833 YP_004178843.1 CDS Isop_1710 NC_014962.1 2497059 2498372 D KEGG: fal:FRAAL3971 putative short-chain acyl dehydrogenase; SPTR: Putative short-chain acyl dehydrogenase; hypothetical protein 2497059..2498372 Isosphaera pallida ATCC 43644 10155834 YP_004178844.1 CDS Isop_1711 NC_014962.1 2498527 2499354 R COGs: COG1117 ABC-type phosphate transport system ATPase component; InterProIPR003439: IPR015850: IPR017871: IPR003593: IPR 005670; KEGG: msl:Msil_2650 phosphate ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Phosphate ABC transporter, ATPase subunit; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein; phosphate ABC transporter ATP-binding protein complement(2498527..2499354) Isosphaera pallida ATCC 43644 10155835 YP_004178845.1 CDS Isop_1712 NC_014962.1 2499442 2500431 R COGs: COG0581 ABC-type phosphate transport system permease component; InterPro IPR000515: IPR005672; KEGG: pfs:PFLU3316 phosphate transport system permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Phosphate transport system permease protein; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA; phosphate ABC transporter complement(2499442..2500431) Isosphaera pallida ATCC 43644 10155836 YP_004178846.1 CDS Isop_1713 NC_014962.1 2500431 2501405 R COGs: COG0573 ABC-type phosphate transport system permease component; InterPro IPR000515: IPR011864; KEGG: msl:Msil_2652 phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Phosphate ABC transporter, inner membrane subunit PstC; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstC; phosphate ABC transporter complement(2500431..2501405) Isosphaera pallida ATCC 43644 10155837 YP_004178847.1 CDS Isop_1714 NC_014962.1 2501402 2502658 R COGs: COG0226 ABC-type phosphate transport system periplasmic component; InterPro IPR005673: IPR006059; KEGG: gvi:gll2034 phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: Phosphate-binding protein; TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: phosphate ABC transporter, phosphate-binding protein; phosphate ABC transporter substrate-binding protein complement(2501402..2502658) Isosphaera pallida ATCC 43644 10155838 YP_004178848.1 CDS Isop_1715 NC_014962.1 2502977 2503447 R KEGG: rlt:Rleg2_2803 putative transmembrane anti-sigma factor; SPTR: Putative transmembrane anti-sigma factor; hypothetical protein complement(2502977..2503447) Isosphaera pallida ATCC 43644 10155839 YP_004178849.1 CDS Isop_1716 NC_014962.1 2503858 2504076 R KEGG: nhl:Nhal_3367 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein complement(2503858..2504076) Isosphaera pallida ATCC 43644 10155840 YP_004178850.1 CDS Isop_1717 NC_014962.1 2504069 2504602 R COGs: COG0139 Phosphoribosyl-AMP cyclohydrolase; InterPro IPR002496; KEGG: pde:Pden_1336 phosphoribosyl-AMP cyclohydrolase; PFAM: phosphoribosyl-AMP cyclohydrolase; PRIAM: Phosphoribosyl-AMP cyclohydrolase; SPTR: Phosphoribosyl-AMP cyclohydrolase; PFAM: Phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-AMP cyclohydrolase complement(2504069..2504602) Isosphaera pallida ATCC 43644 10155841 YP_004178851.1 CDS Isop_1718 NC_014962.1 2504599 2504976 R KEGG: tel:tlr2278 hypothetical protein; SPTR: Tlr2278 protein; PFAM: DsrE/DsrF-like family; hypothetical protein complement(2504599..2504976) Isosphaera pallida ATCC 43644 10155842 YP_004178852.1 CDS Isop_1719 NC_014962.1 2505388 2506380 R COGs: COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase; InterPro IPR018022: IPR002627; KEGG: psl:Psta_4706 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; PRIAM: tRNA isopentenyltransferase; SPTR: tRNA dimethylallyltransferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: IPP transferase; TIGRFAM: tRNA isopentenyltransferase (miaA); tRNA delta(2)-isopentenylpyrophosphate transferase complement(2505388..2506380) Isosphaera pallida ATCC 43644 10155843 YP_004178853.1 CDS Isop_1720 NC_014962.1 2506446 2508419 D InterPro IPR019734: IPR013026; KEGG: psl:Psta_3994 hypothetical protein; SMART: Tetratricopeptide repeat; SPTR: Putative uncharacterized protein; hypothetical protein 2506446..2508419 Isosphaera pallida ATCC 43644 10155844 YP_004178854.1 CDS Isop_1721 NC_014962.1 2508427 2509113 D COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR012837: IPR007197; KEGG: mxa:MXAN_2901 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SPTR: Putative radical SAM domain protein; PFAM: Radical SAM superfamily; radical SAM protein 2508427..2509113 Isosphaera pallida ATCC 43644 10155845 YP_004178855.1 CDS Isop_1722 NC_014962.1 2509285 2510574 R COGs: COG0148 Enolase; InterPro IPR000941: IPR020809: IPR020811: IPR020810; KEGG: dae:Dtox_3933 enolase; PFAM: Enolase-like; PRIAM: Phosphopyruvate hydratase; SPTR: Enolase; TIGRFAM: enolase; PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase; enolase complement(2509285..2510574) Isosphaera pallida ATCC 43644 10155846 YP_004178856.1 CDS Isop_1723 NC_014962.1 2510803 2512047 R InterPro IPR020845; KEGG: ade:Adeh_0700 type III secretion exporter; SPTR: Ribose transport system permease rbsC; hypothetical protein complement(2510803..2512047) Isosphaera pallida ATCC 43644 10155847 YP_004178857.1 CDS Isop_1724 NC_014962.1 2512216 2512971 R COGs: COG0588 Phosphoglycerate mutase 1; InterPro IPR005952: IPR001345: IPR013078; KEGG: cpc:Cpar_1493 phosphoglyceromutase; PFAM: Phosphoglycerate mutase; PRIAM: Bisphosphoglycerate mutase; SPTR: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; TIGRFAM: phosphoglycerate mutase 1 family; PFAM: Phosphoglycerate mutase family; TIGRFAM: phosphoglycerate mutase, BPG-dependent, family 1; phosphoglycerate mutase complement(2512216..2512971) Isosphaera pallida ATCC 43644 10155848 YP_004178858.1 CDS Isop_1725 NC_014962.1 2513313 2515115 R InterPro IPR017909: IPR006076; KEGG: dfe:Dfer_4473 hypothetical protein; PFAM: FAD dependent oxidoreductase; SPTR: Putative uncharacterized protein; PFAM: FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(2513313..2515115) Isosphaera pallida ATCC 43644 10155849 YP_004178859.1 CDS Isop_1726 NC_014962.1 2515112 2515270 R KEGG: rmr:Rmar_1662 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2515112..2515270) Isosphaera pallida ATCC 43644 10155850 YP_004178860.1 CDS Isop_1727 NC_014962.1 2515401 2515724 R COGs: COG0545 FKBP-type peptidyl-prolyl cis-trans isomerase 1; InterPro IPR001179; KEGG: mxa:MXAN_6849 peptidyl-prolyl cis-trans isomerase, FKBP-type; PFAM: peptidylprolyl isomerase FKBP-type; PRIAM: Peptidylprolyl isomerase; SPTR: Peptidyl-prolyl cis-trans isomerase; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; peptidyl-prolyl isomerase complement(2515401..2515724) Isosphaera pallida ATCC 43644 10155851 YP_004178861.1 CDS Isop_1728 NC_014962.1 2515814 2516134 R COGs: COG0393 conserved hypothetical protein; InterPro IPR002765; KEGG: eba:ebA2875 hypothetical protein; PFAM: protein of unknown function DUF74; SPTR: UPF0145 protein AZOSEA16190; manually curated; PFAM: Domain of unknown function (DUF74); hypothetical protein complement(2515814..2516134) Isosphaera pallida ATCC 43644 10155852 YP_004178862.1 CDS Isop_1730 NC_014962.1 2517485 2518504 D COGs: COG0861 Membrane protein TerC possibly involved in tellurium resistance; InterPro IPR005496; KEGG: dae:Dtox_0578 integral membrane protein TerC; PFAM: Integral membrane protein TerC; SPTR: Membrane protein, TerC family; PFAM: Integral membrane protein TerC family; TIGRFAM: integral membrane protein, YkoY family; integral membrane protein TerC 2517485..2518504 Isosphaera pallida ATCC 43644 10155855 YP_004178863.1 CDS Isop_1731 NC_014962.1 2518639 2519217 R KEGG: azo:azo0200 exonuclease SbcC, putative; SPTR: Exonuclease SbcC, putative; hypothetical protein complement(2518639..2519217) Isosphaera pallida ATCC 43644 10155856 YP_004178864.1 CDS Isop_1732 NC_014962.1 2519258 2519743 R KEGG: cpb:Cphamn1_0874 D12 class N6 adenine-specific DNA methyltransferase; SPTR: D12 class N6 adenine-specific DNA methyltransferase; hypothetical protein complement(2519258..2519743) Isosphaera pallida ATCC 43644 10155857 YP_004178865.1 CDS Isop_1733 NC_014962.1 2520133 2520897 D COGs: COG2344 AT-rich DNA-binding protein; InterPro IPR009718: IPR003781; KEGG: psl:Psta_1966 CoA-binding domain protein; PFAM: CoA-binding domain protein; Rex DNA-binding domain protein; SPTR: CoA-binding domain protein; PFAM: CoA binding domain; Putative DNA-binding protein N-terminus; CoA-binding domain-containing protein 2520133..2520897 Isosphaera pallida ATCC 43644 10155858 YP_004178866.1 CDS Isop_1734 NC_014962.1 2520970 2522379 R COGs: COG0531 Amino acid transporter; InterPro IPR002293: IPR004841; KEGG: hoh:Hoch_1917 amino acid permease-associated region; PFAM: amino acid permease-associated region; SPTR: Amino acid permease-associated region; PFAM: Amino acid permease; amino acid permease complement(2520970..2522379) Isosphaera pallida ATCC 43644 10155859 YP_004178867.1 CDS Isop_1735 NC_014962.1 2522544 2523839 R InterPro IPR004155; KEGG: rrs:RoseRS_3392 heat repeat-containing PBS lyase; PFAM: PBS lyase HEAT domain protein repeat-containing protein; SMART: PBS lyase HEAT domain protein repeat-containing protein; SPTR: PBS lyase HEAT domain protein repeat-containing protein; PFAM: PBS lyase HEAT-like repeat; PBS lyase HEAT domain-containing protein complement(2522544..2523839) Isosphaera pallida ATCC 43644 10155860 YP_004178868.1 CDS Isop_1736 NC_014962.1 2524280 2524474 R KEGG: syg:sync_1768 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2524280..2524474) Isosphaera pallida ATCC 43644 10155861 YP_004178869.1 CDS Isop_1737 NC_014962.1 2524861 2526564 D COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017441: IPR008271: IPR020635: IPR 002290: IPR017442; KEGG: plm:Plim_3104 serine/threonine protein kinase-related protein; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Tyrosine protein kinase:Serine/threonine protein kinase:PASTA; PFAM: Protein kinase domain; serine/threonine protein kinase 2524861..2526564 Isosphaera pallida ATCC 43644 10155862 YP_004178870.1 CDS Isop_1738 NC_014962.1 2527273 2528535 D KEGG: ava:Ava_4226 peptidase S8/S53 subtilisin kexin sedolisin; SPTR: APHP domain protein; hypothetical protein 2527273..2528535 Isosphaera pallida ATCC 43644 10155863 YP_004178871.1 CDS Isop_1739 NC_014962.1 2528826 2529278 R KEGG: tra:Trad_2522 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2528826..2529278) Isosphaera pallida ATCC 43644 10155864 YP_004178872.1 CDS Isop_1740 NC_014962.1 2529420 2530886 R COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family; InterPro IPR001155; KEGG: plm:Plim_1981 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase; SPTR: NADH:flavin oxidoreductase; PFAM: NADH:flavin oxidoreductase / NADH oxidase family; NADH:flavin oxidoreductase complement(2529420..2530886) Isosphaera pallida ATCC 43644 10155865 YP_004178873.1 CDS Isop_1741 NC_014962.1 2531108 2531854 R COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003439: IPR017871: IPR003593; KEGG: bpt:Bpet2495 putative glutamine ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative glutamine ABC transporter ATP-binding protein; PFAM: ABC transporter; ABC transporter-like protein complement(2531108..2531854) Isosphaera pallida ATCC 43644 10155866 YP_004178874.1 CDS Isop_1742 NC_014962.1 2531959 2533692 R COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515: IPR001638: IPR010065; KEGG: tai:Taci_0574 polar amino acid ABC transporter, inner membrane subunit; PFAM: extracellular solute-binding protein family 3; binding-protein-dependent transport systems inner membrane component; SMART: extracellular solute-binding protein family 3; SPTR: Polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; polar amino acid ABC transporter inner membrane subunit complement(2531959..2533692) Isosphaera pallida ATCC 43644 10155867 YP_004178875.1 CDS Isop_1743 NC_014962.1 2533928 2535184 R COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; KEGG: tye:THEYE_A1783 ceramide glucosyltransferase, putative; PRIAM: Ceramide glucosyltransferase; SPTR: Ceramide glucosyltransferase, putative; TIGRFAM: hopanoid biosynthesis associated glycosyl transferase protein HpnI; ceramide glucosyltransferase complement(2533928..2535184) Isosphaera pallida ATCC 43644 10155868 YP_004178876.1 CDS Isop_1744 NC_014962.1 2535297 2535860 R InterPro IPR017909; KEGG: rfr:Rfer_1421 thiopurine S-methyltransferase; SPTR: Secreted protein; hypothetical protein complement(2535297..2535860) Isosphaera pallida ATCC 43644 10155869 YP_004178877.1 CDS Isop_1745 NC_014962.1 2536048 2538825 R COGs: COG0466 ATP-dependent Lon protease; InterProIPR001984: IPR008268: IPR003111: IPR003593: IPR 004815: IPR003959; KEGG: dtu:Dtur_1560 ATP-dependent protease La; PFAM: AAA ATPase central domain protein; peptidase S16 lon domain protein; PRIAM: Endopeptidase La; SMART: peptidase S16 lon domain protein; AAA ATPase; SPTR: ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La; ATP-dependent proteinase complement(2536048..2538825) Isosphaera pallida ATCC 43644 10155870 YP_004178878.1 CDS Isop_1746 NC_014962.1 2539466 2540392 D COGs: COG1453 oxidoreductase of the aldo/keto reductase family; InterPro IPR017909: IPR020471: IPR006311: IPR001395; KEGG: sus:Acid_7548 oxidoreductase; PFAM: aldo/keto reductase; SPTR: Oxidoreductase, aldo/keto reductase family; PFAM: Aldo/keto reductase family; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; aldo/keto reductase 2539466..2540392 Isosphaera pallida ATCC 43644 10155871 YP_004178879.1 CDS Isop_1747 NC_014962.1 2540624 2542837 D COGs: COG1966 Carbon starvation protein predicted membrane protein; InterPro IPR003706; KEGG: kra:Krad_4167 carbon starvation protein CstA; PFAM: carbon starvation protein CstA; SPTR: Carbon starvation protein CstA; PFAM: Carbon starvation protein CstA; carbon starvation protein CstA 2540624..2542837 Isosphaera pallida ATCC 43644 10155872 YP_004178880.1 CDS Isop_1748 NC_014962.1 2542972 2545890 R COGs: COG2133 Glucose/sorbosone dehydrogenase; KEGG: mxa:MXAN_3138 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Glucose / Sorbosone dehydrogenase; TIGRFAM: conserved hypothetical protein, HNE_0200 family; hypothetical protein complement(2542972..2545890) Isosphaera pallida ATCC 43644 10155873 YP_004178881.1 CDS Isop_1749 NC_014962.1 2545908 2546123 D hypothetical protein 2545908..2546123 Isosphaera pallida ATCC 43644 10155874 YP_004178882.1 CDS Isop_1750 NC_014962.1 2546337 2547179 D COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease component; InterPro IPR003453; KEGG: psl:Psta_2136 protein of unknown function DUF140; PFAM: protein of unknown function DUF140; SPTR: Probable permease of ABC transporter; PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein; hypothetical protein 2546337..2547179 Isosphaera pallida ATCC 43644 10155875 YP_004178883.1 CDS Isop_1751 NC_014962.1 2547184 2548125 D COGs: COG1127 ABC-type transport system involved in resistance to organic solvents ATPase component; InterPro IPR003439: IPR017871: IPR003593; KEGG: psl:Psta_2135 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter; ABC transporter-like protein 2547184..2548125 Isosphaera pallida ATCC 43644 10155876 YP_004178884.1 CDS Isop_1752 NC_014962.1 2548279 2549397 D COGs: COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component; InterPro IPR003399; KEGG: psl:Psta_2134 mammalian cell entry related domain protein; PFAM: Mammalian cell entry related domain protein; SPTR: Putative uncharacterized protein; PFAM: mce related protein; mammalian cell entry domain-containing protein 2548279..2549397 Isosphaera pallida ATCC 43644 10155877 YP_004178885.1 CDS Isop_1753 NC_014962.1 2550318 2551976 R InterPro IPR019734: IPR013026; KEGG: cts:Ctha_0597 TPR repeat-containing protein; SPTR: TPR repeat-containing protein; PFAM: Tetratricopeptide repeat; hypothetical protein complement(2550318..2551976) Isosphaera pallida ATCC 43644 10155878 YP_004178886.1 CDS Isop_1754 NC_014962.1 2552253 2553113 D COGs: COG1768 phosphohydrolase; InterPro IPR004843; KEGG: hau:Haur_4804 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase; metallophosphoesterase 2552253..2553113 Isosphaera pallida ATCC 43644 10155879 YP_004178887.1 CDS Isop_1755 NC_014962.1 2553107 2553865 R KEGG: psl:Psta_2876 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2553107..2553865) Isosphaera pallida ATCC 43644 10155880 YP_004178888.1 CDS Isop_1756 NC_014962.1 2553902 2555869 D COGs: COG2870 ADP-heptose synthase bifunctional sugar kinase/adenylyltransferase; InterPro IPR011914: IPR004821: IPR011611: IPR004820; KEGG: plm:Plim_0898 cytidyltransferase-related domain protein; PFAM: PfkB domain protein; cytidylyltransferase; SPTR: Cytidyltransferase-related domain protein; TIGRFAM: rfaE bifunctional protein; cytidyltransferase-related domain protein; PFAM: Cytidylyltransferase; pfkB family carbohydrate kinase; TIGRFAM: rfaE bifunctional protein, domain II; rfaE bifunctional protein, domain I; cytidyltransferase-related domain; D-alpha,beta-D-heptose 7-phosphate 1-kinase 2553902..2555869 Isosphaera pallida ATCC 43644 10155881 YP_004178889.1 CDS Isop_1757 NC_014962.1 2556031 2557242 D COGs: COG4637 ATPase; InterPro IPR003395; KEGG: alv:Alvin_0247 SMC domain protein; PFAM: SMC domain protein; SPTR: SMC domain protein; SMC domain-containing protein 2556031..2557242 Isosphaera pallida ATCC 43644 10155882 YP_004178890.1 CDS Isop_1758 NC_014962.1 2557239 2557994 D KEGG: alv:Alvin_0246 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2557239..2557994 Isosphaera pallida ATCC 43644 10155883 YP_004178891.1 CDS Isop_1759 NC_014962.1 2558054 2560150 R InterPro IPR017936: IPR001258; KEGG: psl:Psta_3322 NHL repeat containing protein; PFAM: NHL repeat containing protein; SPTR: Putative uncharacterized protein; PFAM: NHL repeat; AhpC/TSA family; NHL repeat containing protein complement(2558054..2560150) Isosphaera pallida ATCC 43644 10155884 YP_004178892.1 CDS Isop_1760 NC_014962.1 2560336 2562366 R COGs: COG3391 conserved hypothetical protein; InterPro IPR017936: IPR001258; KEGG: psl:Psta_3322 NHL repeat containing protein; PFAM: NHL repeat containing protein; SPTR: NHL repeat containing protein; PFAM: NHL repeat; AhpC/TSA family; NHL repeat containing protein complement(2560336..2562366) Isosphaera pallida ATCC 43644 10155885 YP_004178893.1 CDS Isop_1761 NC_014962.1 2562731 2563321 D KEGG: tcu:Tcur_2365 glucose-methanol-choline oxidoreductase; SPTR: AMP-dependent synthetase and ligase; hypothetical protein 2562731..2563321 Isosphaera pallida ATCC 43644 10155886 YP_004178894.1 CDS Isop_1762 NC_014962.1 2563433 2564518 D COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR000808: IPR002744: IPR019591; KEGG: sti:Sthe_0642 protein of unknown function DUF59; PFAM: ATPase-like, ParA/MinD; protein of unknown function DUF59; SPTR: Putative uncharacterized protein; PFAM: ParA/MinD ATPase like; Domain of unknown function DUF59; Anion-transporting ATPase; ParA/MinD-like ATPase 2563433..2564518 Isosphaera pallida ATCC 43644 10155887 YP_004178895.1 CDS Isop_1763 NC_014962.1 2564515 2565861 D KEGG: ade:Adeh_2641 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2564515..2565861 Isosphaera pallida ATCC 43644 10155888 YP_004178896.1 CDS Isop_1764 NC_014962.1 2565970 2566659 D InterPro IPR008915; KEGG: plm:Plim_2044 peptidase M50; PFAM: peptidase M50; SPTR: Putative uncharacterized protein; PFAM: Peptidase family M50; peptidase M50 2565970..2566659 Isosphaera pallida ATCC 43644 10155889 YP_004178897.1 CDS Isop_1765 NC_014962.1 2566771 2567958 R KEGG: plm:Plim_1832 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2566771..2567958) Isosphaera pallida ATCC 43644 10155890 YP_004178898.1 CDS Isop_1766 NC_014962.1 2568080 2570149 R KEGG: plm:Plim_1833 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2568080..2570149) Isosphaera pallida ATCC 43644 10155891 YP_004178899.1 CDS Isop_1767 NC_014962.1 2571036 2572031 R KEGG: nca:Noca_1954 putative lipoprotein; SPTR: Putative lipoprotein; hypothetical protein complement(2571036..2572031) Isosphaera pallida ATCC 43644 10155892 YP_004178900.1 CDS Isop_1768 NC_014962.1 2572795 2574420 D KEGG: bac:BamMC406_3019 type VI secretion system Vgr family protein; SPTR: Type VI secretion system Vgr family protein; hypothetical protein 2572795..2574420 Isosphaera pallida ATCC 43644 10155893 YP_004178901.1 CDS Isop_1769 NC_014962.1 2574724 2574984 D KEGG: rba:RB11569 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2574724..2574984 Isosphaera pallida ATCC 43644 10155894 YP_004178902.1 CDS Isop_1770 NC_014962.1 2575295 2576458 R KEGG: nca:Noca_4359 ATPase domain-containing protein; SPTR: ATP-binding region, ATPase domain protein domain protein; hypothetical protein complement(2575295..2576458) Isosphaera pallida ATCC 43644 10155895 YP_004178903.1 CDS Isop_1771 NC_014962.1 2576572 2577846 R KEGG: psl:Psta_2465 MotA/TolQ/ExbB proton channel; SPTR: Probable biopolymer transport ExbB-related protein; PFAM: MotA/TolQ/ExbB proton channel family; hypothetical protein complement(2576572..2577846) Isosphaera pallida ATCC 43644 10155896 YP_004178904.1 CDS Isop_1772 NC_014962.1 2578206 2579564 R KEGG: hoh:Hoch_4942 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2578206..2579564) Isosphaera pallida ATCC 43644 10155897 YP_004178905.1 CDS Isop_1773 NC_014962.1 2579561 2580985 R KEGG: rrs:RoseRS_1099 glycosyl transferase family protein; SPTR: Glycosyl transferase, family 39; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase; hypothetical protein complement(2579561..2580985) Isosphaera pallida ATCC 43644 10155898 YP_004178906.1 CDS Isop_1774 NC_014962.1 2581183 2582838 D KEGG: spu:577326 similar to Cpsf6 protein; SPTR: Extensin-like protein; TIGRFAM: conserved hypothetical protein TIGR01244; hypothetical protein 2581183..2582838 Isosphaera pallida ATCC 43644 10155899 YP_004178907.1 CDS Isop_1775 NC_014962.1 2582648 2583505 R COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: rmr:Rmar_1191 pseudouridine synthase; PFAM: pseudouridine synthase; SPTR: Pseudouridine synthase; PFAM: RNA pseudouridylate synthase; pseudouridine synthase complement(2582648..2583505) Isosphaera pallida ATCC 43644 10155900 YP_004178908.1 CDS Isop_1776 NC_014962.1 2583502 2584959 R COGs: COG0585 conserved hypothetical protein; InterPro IPR011760: IPR020119: IPR001656; KEGG: plm:Plim_3118 tRNA pseudouridine synthase D TruD; PFAM: tRNA pseudouridine synthase D TruD; SPTR: tRNA pseudouridine synthase D TruD; PFAM: tRNA pseudouridine synthase D (TruD); TIGRFAM: tRNA pseudouridine synthase, TruD family; tRNA pseudouridine synthase D TruD complement(2583502..2584959) Isosphaera pallida ATCC 43644 10155901 YP_004178909.1 CDS Isop_1777 NC_014962.1 2584956 2585189 R KEGG: plm:Plim_0875 Flp/Fap pilin component; SPTR: Putative uncharacterized protein; PFAM: Flp/Fap pilin component; hypothetical protein complement(2584956..2585189) Isosphaera pallida ATCC 43644 10155902 YP_004178910.1 CDS Isop_1778 NC_014962.1 2586003 2586821 D COGs: COG0062 conserved hypothetical protein; InterPro IPR004443; KEGG: mgm:Mmc1_3307 carbohydrate kinase, YjeF related protein; PFAM: YjeF-family domain-containing protein; SPTR: Carbohydrate kinase, YjeF related protein; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: YjeF-related protein N-terminus; TIGRFAM: yjeF N-terminal region; carbohydrate kinase 2586003..2586821 Isosphaera pallida ATCC 43644 10155903 YP_004178911.1 CDS Isop_1779 NC_014962.1 2587153 2587665 R KEGG: hsa:643314 KIAA0754; SPTR: Uncharacterized protein KIAA0754; hypothetical protein complement(2587153..2587665) Isosphaera pallida ATCC 43644 10155904 YP_004178912.1 CDS Isop_1780 NC_014962.1 2587899 2588801 R COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: psl:Psta_3742 peptidase M28; PFAM: peptidase M28; SPTR: Putative uncharacterized protein; PFAM: Peptidase family M28; peptidase M28 complement(2587899..2588801) Isosphaera pallida ATCC 43644 10155905 YP_004178913.1 CDS Isop_1781 NC_014962.1 2588848 2589888 R COGs: COG0462 Phosphoribosylpyrophosphate synthetase; InterPro IPR000842: IPR000169: IPR005946: IPR000836; KEGG: plm:Plim_0451 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; PRIAM: Ribose-phosphate diphosphokinase; SPTR: Ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase; ribose-phosphate pyrophosphokinase complement(2588848..2589888) Isosphaera pallida ATCC 43644 10155906 YP_004178914.1 CDS Isop_1782 NC_014962.1 2590141 2591322 R COGs: COG0042 tRNA-dihydrouridine synthase; InterPro IPR018517: IPR004652: IPR001269; KEGG: plm:Plim_2300 TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; SPTR: TIM-barrel protein, nifR3 family; TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: Dihydrouridine synthase (Dus); TIGRFAM: putative TIM-barrel protein, nifR3 family; tRNA-U20-dihydrouridine synthase complement(2590141..2591322) Isosphaera pallida ATCC 43644 10155907 YP_004178915.1 CDS Isop_1783 NC_014962.1 2591490 2592461 R COGs: COG0061 sugar kinase; InterPro IPR002504; KEGG: plm:Plim_1521 ATP-NAD/AcoX kinase; PFAM: ATP-NAD/AcoX kinase; SPTR: Probable inorganic polyphosphate/ATP-NAD kinase; PFAM: ATP-NAD kinase; ATP-NAD/AcoX kinase complement(2591490..2592461) Isosphaera pallida ATCC 43644 10155908 YP_004178916.1 CDS Isop_1784 NC_014962.1 2592680 2594695 R COGs: COG1154 Deoxyxylulose-5-phosphate synthase; InterPro IPR005477: IPR005475: IPR005476; KEGG: plm:Plim_2440 deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain-containing protein; SPTR: 1-deoxy-D-xylulose-5-phosphate synthase; TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase; 1-deoxy-D-xylulose-5-phosphate synthase complement(2592680..2594695) Isosphaera pallida ATCC 43644 10155909 YP_004178917.1 CDS Isop_1785 NC_014962.1 2594695 2595705 R COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: alv:Alvin_0767 polyprenyl synthetase; PFAM: Polyprenyl synthetase; SPTR: Polyprenyl synthetase; PFAM: Polyprenyl synthetase; farnesyl-diphosphate synthase complement(2594695..2595705) Isosphaera pallida ATCC 43644 10155910 YP_004178918.1 CDS Isop_1786 NC_014962.1 2596034 2596327 R InterPro IPR003761; KEGG: hch:HCH_05864 exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; SPTR: Exodeoxyribonuclease 7 small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; exodeoxyribonuclease VII small subunit complement(2596034..2596327) Isosphaera pallida ATCC 43644 10155911 YP_004178919.1 CDS Isop_1787 NC_014962.1 2596533 2597276 R COGs: COG0062 conserved hypothetical protein; InterPro IPR004443; KEGG: rxy:Rxyl_0802 YjeF-related protein-like protein; PFAM: YjeF-family domain-containing protein; SPTR: Carbohydrate kinase, YjeF related protein; PFAM: YjeF-related protein N-terminus; TIGRFAM: yjeF N-terminal region; hypothetical protein complement(2596533..2597276) Isosphaera pallida ATCC 43644 10155912 YP_004178920.1 CDS Isop_1788 NC_014962.1 2597776 2598567 R COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR018376: IPR001753; KEGG: msv:Mesil_1247 enoyl-CoA hydratase/isomerase; PFAM: Enoyl-CoA hydratase/isomerase; SPTR: Enoyl-CoA hydratase/isomerase; PFAM: Enoyl-CoA hydratase/isomerase family; Enoyl-CoA hydratase/isomerase complement(2597776..2598567) Isosphaera pallida ATCC 43644 10155913 YP_004178921.1 CDS Isop_1789 NC_014962.1 2599886 2601013 D COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001972: IPR001107; KEGG: pca:Pcar_2837 membrane protease subunit, stomatin/prohibitin-like; PFAM: band 7 protein; SMART: band 7 protein; SPTR: Putative uncharacterized protein; PFAM: SPFH domain / Band 7 family; hypothetical protein 2599886..2601013 Isosphaera pallida ATCC 43644 10155917 YP_004178922.1 CDS Isop_1790 NC_014962.1 2601340 2602077 R InterPro IPR004843; KEGG: gau:GAU_1565 UDP-2,3-diacylglucosamine hydrolase; PFAM: metallophosphoesterase; SPTR: UDP-2,3-diacylglucosamine hydrolase; PFAM: Calcineurin-like phosphoesterase; metallophosphoesterase complement(2601340..2602077) Isosphaera pallida ATCC 43644 10155918 YP_004178923.1 CDS Isop_1791 NC_014962.1 2602131 2603060 R COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; KEGG: pca:Pcar_1329 beta-lactamase superfamily hydrolase; SPTR: Metal-dependent hydrolases of the beta-lactamase superfamily I; PFAM: Metallo-beta-lactamase superfamily; beta-lactamase superfamily hydrolase complement(2602131..2603060) Isosphaera pallida ATCC 43644 10155919 YP_004178924.1 CDS Isop_1792 NC_014962.1 2603351 2603980 R InterPro IPR011637; KEGG: cpi:Cpin_4093 DoxX family protein; PFAM: DoxX family protein; SPTR: DoxX family protein; PFAM: DoxX; DoxX family protein complement(2603351..2603980) Isosphaera pallida ATCC 43644 10155920 YP_004178925.1 CDS Isop_1793 NC_014962.1 2604098 2604643 R COGs: COG0669 Phosphopantetheine adenylyltransferase; InterPro IPR001980: IPR004821: IPR004820; KEGG: plm:Plim_1290 pantetheine-phosphate adenylyltransferase; PFAM: cytidylyltransferase; PRIAM: Pantetheine-phosphate adenylyltransferase; SPTR: Phosphopantetheine adenylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; manually curated; PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain; phosphopantetheine adenylyltransferase complement(2604098..2604643) Isosphaera pallida ATCC 43644 10155921 YP_004178926.1 CDS Isop_1794 NC_014962.1 2604774 2606510 R COGs: COG0520 Selenocysteine lyase; InterPro IPR000192; KEGG: psl:Psta_3767 aminotransferase class V; PFAM: aminotransferase class V; SPTR: Aminotransferase class V; PFAM: Aminotransferase class-V; class V aminotransferase complement(2604774..2606510) Isosphaera pallida ATCC 43644 10155922 YP_004178927.1 CDS Isop_1796 NC_014962.1 2607192 2611754 R InterPro IPR008454; KEGG: ami:Amir_2421 conserved repeat domain protein; PFAM: Cna B domain protein; SPTR: Conserved repeat domain protein; PFAM: Cna protein B-type domain; Cna B domain-containing protein complement(2607192..2611754) Isosphaera pallida ATCC 43644 10155924 YP_004178928.1 CDS Isop_1797 NC_014962.1 2612273 2613826 D KEGG: plm:Plim_2486 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2612273..2613826 Isosphaera pallida ATCC 43644 10155925 YP_004178929.1 CDS Isop_1798 NC_014962.1 2614010 2614843 D COGs: COG1183 Phosphatidylserine synthase; InterPro IPR000462; KEGG: gob:Gobs_4045 CDP-diacylglycerol-cholineO-phosphatidyl transferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: CDP-diacylglycerol-choline O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 2614010..2614843 Isosphaera pallida ATCC 43644 10155926 YP_004178930.1 CDS Isop_1799 NC_014962.1 2614893 2616263 D KEGG: psl:Psta_3977 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2614893..2616263 Isosphaera pallida ATCC 43644 10155927 YP_004178931.1 CDS Isop_1800 NC_014962.1 2616338 2619838 D KEGG: psl:Psta_3976 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2616338..2619838 Isosphaera pallida ATCC 43644 10155928 YP_004178932.1 CDS Isop_1801 NC_014962.1 2619890 2621413 R COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR006076; KEGG: afw:Anae109_3492 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: FAD dependent oxidoreductase; manually curated; PFAM: Flavin containing amine oxidoreductase; FAD dependent oxidoreductase complement(2619890..2621413) Isosphaera pallida ATCC 43644 10155929 YP_004178933.1 CDS Isop_1802 NC_014962.1 2621578 2622543 R COGs: COG0284 Orotidine-5'-phosphate decarboxylase; InterPro IPR018089: IPR011995: IPR001754; KEGG: psl:Psta_1002 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; PRIAM: Orotidine-5'-phosphate decarboxylase; SPTR: Orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 2; orotidine 5'-phosphate decarboxylase complement(2621578..2622543) Isosphaera pallida ATCC 43644 10155930 YP_004178934.1 CDS Isop_1803 NC_014962.1 2622559 2624649 R COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR008391; KEGG: rba:RB5616 hypothetical protein; PFAM: Acetyl xylan esterase; SPTR: Putative uncharacterized protein; PFAM: Prolyl oligopeptidase family; acetyl xylan esterase complement(2622559..2624649) Isosphaera pallida ATCC 43644 10155931 YP_004178935.1 CDS Isop_1804 NC_014962.1 2624799 2624957 D hypothetical protein 2624799..2624957 Isosphaera pallida ATCC 43644 10155932 YP_004178936.1 CDS Isop_1805 NC_014962.1 2624982 2627132 R COGs: COG4935 Regulatory P domain of the subtilisin-like proprotein convertase and other protease; InterPro IPR018247: IPR002884; KEGG: scl:sce1039 hypothetical protein; PFAM: Proprotein convertase P; SPTR: Serine protease, subtilase family protein; PFAM: Proprotein convertase P-domain; Proprotein convertase P complement(2624982..2627132) Isosphaera pallida ATCC 43644 10155933 YP_004178937.1 CDS Isop_1806 NC_014962.1 2627837 2632654 D InterPro IPR006626: IPR003644: IPR001434: IPR002884; KEGG: hau:Haur_4998 Na-Ca exchanger/integrin-beta4; PFAM: Proprotein convertase P; SMART: Na-Ca exchanger/integrin-beta4; Parallel beta-helix repeat; SPTR: Integrin alpha chain; TIGRFAM: conserved repeat domain protein; PFAM: Calx-beta domain; Proprotein convertase P-domain; TIGRFAM: conserved repeat domain; hypothetical protein 2627837..2632654 Isosphaera pallida ATCC 43644 10155934 YP_004178938.1 CDS Isop_1807 NC_014962.1 2632925 2633731 R COGs: COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase glutamine amidotransferase domain; InterPro IPR017926: IPR010075: IPR011698; KEGG: adg:Adeg_0621 phosphoribosylformylglycinamidine synthase I; PFAM: CobB/CobQ domain protein glutamine amidotransferase; PRIAM: Phosphoribosylformylglycinamidine synthase; SPTR: Phosphoribosylformylglycinamidine synthase I; TIGRFAM: phosphoribosylformylglycinamidine synthase I; PFAM: DJ-1/PfpI family; TIGRFAM: phosphoribosylformylglycinamidine synthase I; phosphoribosylformylglycinamidine synthase subunit I complement(2632925..2633731) Isosphaera pallida ATCC 43644 10155936 YP_004178939.1 CDS Isop_1808 NC_014962.1 2633929 2634759 R KEGG: hoh:Hoch_4264 protein of unknown function DUF88; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF88; hypothetical protein complement(2633929..2634759) Isosphaera pallida ATCC 43644 10155937 YP_004178940.1 CDS Isop_1809 NC_014962.1 2635150 2638113 R COGs: COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase synthetase domain; InterPro IPR010074: IPR000728: IPR010918; KEGG: plm:Plim_1829 phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; PRIAM: Phosphoribosylformylglycinamidine synthase; SPTR: Phosphoribosylformylglycinamidine synthase II; TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase II; phosphoribosylformylglycinamidine synthase subunit II complement(2635150..2638113) Isosphaera pallida ATCC 43644 10155938 YP_004178941.1 CDS Isop_1810 NC_014962.1 2638657 2639622 R COGs: COG0287 Prephenate dehydrogenase; InterPro IPR003099; KEGG: dau:Daud_1182 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase; SPTR: Prephenate dehydrogenase; PFAM: Prephenate dehydrogenase; prephenate dehydrogenase complement(2638657..2639622) Isosphaera pallida ATCC 43644 10155939 YP_004178942.1 CDS Isop_1811 NC_014962.1 2639677 2640723 R KEGG: plm:Plim_3162 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2639677..2640723) Isosphaera pallida ATCC 43644 10155940 YP_004178943.1 CDS Isop_1812 NC_014962.1 2641262 2642125 D COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR000943: IPR014284: IPR009042: IPR007627: IPR 007624: IPR007630; KEGG: rba:RB3727 RNA polymerase sigma factor RpoS; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 3 domain protein; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-38 subunit RpoS 2641262..2642125 Isosphaera pallida ATCC 43644 10155941 YP_004178944.1 CDS Isop_1813 NC_014962.1 2642401 2643204 D KEGG: plm:Plim_0226 signal peptide-containing protein; SPTR: Putative uncharacterized protein; hypothetical protein 2642401..2643204 Isosphaera pallida ATCC 43644 10155942 YP_004178945.1 CDS Isop_1814 NC_014962.1 2643828 2645621 D InterPro IPR000253; KEGG: psl:Psta_2773 FHA domain containing protein; PFAM: Forkhead-associated protein; SPTR: FHA domain containing protein; forkhead-associated protein 2643828..2645621 Isosphaera pallida ATCC 43644 10155943 YP_004178946.1 CDS Isop_1815 NC_014962.1 2645827 2648067 D COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017441: IPR020635: IPR002290: IPR 017442; KEGG: psl:Psta_2774 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain; serine/threonine protein kinase 2645827..2648067 Isosphaera pallida ATCC 43644 10155944 YP_004178947.1 CDS Isop_1816 NC_014962.1 2648200 2648907 D KEGG: fre:Franean1_2472 copper resistance protein CopC; SPTR: Copper resistance protein CopC; hypothetical protein 2648200..2648907 Isosphaera pallida ATCC 43644 10155945 YP_004178948.1 CDS Isop_1817 NC_014962.1 2648976 2649617 D COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: psl:Psta_2776 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: Probable RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; ECF subfamily RNA polymerase sigma-24 factor 2648976..2649617 Isosphaera pallida ATCC 43644 10155946 YP_004178949.1 CDS Isop_1818 NC_014962.1 2649760 2650209 D KEGG: rba:RB1994 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2649760..2650209 Isosphaera pallida ATCC 43644 10155947 YP_004178950.1 CDS Isop_1819 NC_014962.1 2650402 2651520 D COGs: COG0337 3-dehydroquinate synthetase; InterPro IPR002658: IPR016303: IPR016037; KEGG: rsc:RCFBP_10481 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; PRIAM: 3-dehydroquinate synthase; SPTR: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; 3-dehydroquinate synthase 2650402..2651520 Isosphaera pallida ATCC 43644 10155948 YP_004178951.1 CDS Isop_1820 NC_014962.1 2651517 2652878 D COGs: COG0758 Rossmann fold nucleotide-binding protein involved in DNA uptake; InterPro IPR003488; KEGG: psl:Psta_1070 DNA protecting protein DprA; PFAM: SMF family protein; SPTR: DNA processing chain A; TIGRFAM: DNA protecting protein DprA; PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA; DNA protecting protein DprA 2651517..2652878 Isosphaera pallida ATCC 43644 10155949 YP_004178952.1 CDS Isop_1821 NC_014962.1 2653196 2656984 D KEGG: plm:Plim_2849 tyrosine protein kinase; SPTR: Tyrosine protein kinase; hypothetical protein 2653196..2656984 Isosphaera pallida ATCC 43644 10155950 YP_004178953.1 CDS Isop_1822 NC_014962.1 2657052 2657387 D KEGG: hmu:Hmuk_0186 hypothetical protein; hypothetical protein 2657052..2657387 Isosphaera pallida ATCC 43644 10155951 YP_004178954.1 CDS Isop_1823 NC_014962.1 2657702 2659186 D COGs: COG1305 Transglutaminase-like protein; InterPro IPR002931; KEGG: psl:Psta_4154 transglutaminase domain protein; PFAM: transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein; SPTR: Transglutaminase-like protein; PFAM: Transglutaminase-like superfamily; transglutaminase domain-containing protein 2657702..2659186 Isosphaera pallida ATCC 43644 10155952 YP_004178955.1 CDS Isop_1824 NC_014962.1 2659381 2661216 R COGs: COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylase; InterPro IPR002830; KEGG: gur:Gura_1842 UbiD family decarboxylase; PFAM: Carboxylyase-related protein; SPTR: UbiD family decarboxylase; TIGRFAM: UbiD family decarboxylase; PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: UbiD family decarboxylases; UbiD family decarboxylase complement(2659381..2661216) Isosphaera pallida ATCC 43644 10155953 YP_004178956.1 CDS Isop_1825 NC_014962.1 2661525 2662085 D KEGG: plm:Plim_3517 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2661525..2662085 Isosphaera pallida ATCC 43644 10155954 YP_004178957.1 CDS Isop_1826 NC_014962.1 2662130 2662237 D hypothetical protein 2662130..2662237 Isosphaera pallida ATCC 43644 10155955 YP_004178958.1 CDS Isop_1827 NC_014962.1 2662295 2662831 R COGs: COG0691 tmRNA-binding protein; InterPro IPR000037: IPR020081; KEGG: tfu:Tfu_2476 SsrA-binding protein; PFAM: SmpB protein; SPTR: SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; TIGRFAM: SsrA-binding protein; SsrA-binding protein complement(2662295..2662831) Isosphaera pallida ATCC 43644 10155956 YP_004178959.1 CDS Isop_1828 NC_014962.1 2663048 2665933 R KEGG: sti:Sthe_2169 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2663048..2665933) Isosphaera pallida ATCC 43644 10155957 YP_004178960.1 CDS Isop_1829 NC_014962.1 2666103 2666333 R KEGG: cdi:DIP0772 putative ATP-dependent DNA helicase; SPTR: Putative ATP-dependent DNA helicase; hypothetical protein complement(2666103..2666333) Isosphaera pallida ATCC 43644 10155958 YP_004178961.1 CDS Isop_1830 NC_014962.1 2666376 2668082 R COGs: COG1061 DNA or RNA helicase of superfamily II; InterProIPR006935: IPR001650: IPR014001: IPR001161: IPR 014021; KEGG: mta:Moth_1918 DEAD/DEAH box helicase-like; PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: DEAD/DEAH box helicase-like; PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; type III restriction protein res subunit complement(2666376..2668082) Isosphaera pallida ATCC 43644 10155959 YP_004178962.1 CDS Isop_1831 NC_014962.1 2668500 2669453 R KEGG: hoh:Hoch_4851 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2668500..2669453) Isosphaera pallida ATCC 43644 10155960 YP_004178963.1 CDS Isop_1832 NC_014962.1 2669450 2672626 R COGs: COG1203 helicase; InterPro IPR013444: IPR006483; KEGG: hoh:Hoch_4850 CRISPR-associated helicase Cas3, Anaes-subtype; SPTR: CRISPR-associated helicase Cas3, Anaes-subtype; TIGRFAM: CRISPR-associated helicase Cas3, Anaes-subtype; CRISPR-associated HD domain protein; TIGRFAM: CRISPR-associated endonuclease Cas3-HD; CRISPR-associated helicase Cas3, Anaes-subtype; CRISPR-associated helicase Cas3, Anaes-subtype complement(2669450..2672626) Isosphaera pallida ATCC 43644 10155961 YP_004178964.1 CDS Isop_1833 NC_014962.1 2672623 2674335 R InterPro IPR019089; KEGG: hoh:Hoch_4849 hypothetical protein; PFAM: CRISPR-associated protein, GSU0054; SPTR: Putative uncharacterized protein; PFAM: CRISPR-associated protein, GSU0054 family (Cas_GSU0054); TIGRFAM: CRISPR-associated protein, GSU0054 family; CRISPR-associated protein complement(2672623..2674335) Isosphaera pallida ATCC 43644 10155962 YP_004178965.1 CDS Isop_1834 NC_014962.1 2674332 2675630 R InterPro IPR013403; KEGG: hoh:Hoch_4848 CRISPR-associated protein GSU0053; PFAM: CRISPR-associated protein GSU0053; SPTR: CRISPR-associated protein GSU0053; PFAM: CRISPR-associated protein GSU0053 (Cas_GSU0053); TIGRFAM: CRISPR-associated protein, GSU0053 family, N-terminal domain; Csx4 family CRISPR-associated protein complement(2674332..2675630) Isosphaera pallida ATCC 43644 10155963 YP_004178966.1 CDS Isop_1835 NC_014962.1 2676152 2677243 D InterPro IPR007029; KEGG: psl:Psta_0875 hypothetical protein; PFAM: YHS domain-containing protein; SPTR: Putative uncharacterized protein; PFAM: YHS domain; YHS domain-containing protein 2676152..2677243 Isosphaera pallida ATCC 43644 10155964 YP_004178967.1 CDS Isop_1836 NC_014962.1 2677420 2677929 D COGs: COG0634 Hypoxanthine-guanine phosphoribosyltransferase; InterPro IPR000836: IPR005904; KEGG: psl:Psta_1642 hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; PRIAM: Hypoxanthine phosphoribosyltransferase; SPTR: Hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase 2677420..2677929 Isosphaera pallida ATCC 43644 10155965 YP_004178968.1 CDS Isop_1837 NC_014962.1 2678231 2680003 D InterPro IPR000253; KEGG: scl:sce6746 sigma-54 dependent transcriptional regulator; PFAM: Forkhead-associated protein; SPTR: Whole genome shotgun sequence assembly, scaffold_139; PFAM: FHA domain; forkhead-associated protein 2678231..2680003 Isosphaera pallida ATCC 43644 10155966 YP_004178969.1 CDS Isop_1838 NC_014962.1 2680209 2680484 D KEGG: ptm:GSPATT00033131001 hypothetical protein; SPTR: Chromosome undetermined scaffold_134, whole genome shotgun sequence; hypothetical protein 2680209..2680484 Isosphaera pallida ATCC 43644 10155967 YP_004178970.1 CDS Isop_1839 NC_014962.1 2680591 2681169 D InterPro IPR002545; KEGG: enc:ECL_03259 purine-binding chemotaxis protein CheW; PFAM: CheW domain protein; SPTR: Purine-binding chemotaxis protein CheW; PFAM: CheW-like domain; CheW domain-containing protein 2680591..2681169 Isosphaera pallida ATCC 43644 10155968 YP_004178971.1 CDS Isop_1840 NC_014962.1 2681840 2683231 D COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR004089: IPR004090; KEGG: cyb:CYB_1935 putative methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; SPTR: Methyl-accepting chemotaxis sensory transducer; PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis sensory transducer 2681840..2683231 Isosphaera pallida ATCC 43644 10155969 YP_004178972.1 CDS Isop_1841 NC_014962.1 2683550 2687527 D COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterProIPR008207: IPR004105: IPR003594: IPR002545: IPR 001789: IPR004358: IPR005467; KEGG: aeh:Mlg_0359 CheA signal transduction histidine kinases; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; CheW domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; Hpt domain protein; CheW domain protein; SPTR: CheA signal transduction histidine kinases; PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; Signal transducing histidine kinase, homodimeric domain; Hpt domain; CheA signal transduction histidine kinase 2683550..2687527 Isosphaera pallida ATCC 43644 10155970 YP_004178973.1 CDS Isop_1842 NC_014962.1 2687649 2689193 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789; KEGG: afw:Anae109_0804 multi-sensor signal transduction histidine kinase; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator receiver protein; PFAM: Response regulator receiver domain; response regulator receiver protein 2687649..2689193 Isosphaera pallida ATCC 43644 10155971 YP_004178974.1 CDS Isop_1843 NC_014962.1 2689395 2690507 D KEGG: dgr:Dgri_GH24162 GH24162 gene product from transcript GH24162-RA; SPTR: Kinesin K39, putative (ISS); hypothetical protein 2689395..2690507 Isosphaera pallida ATCC 43644 10155972 YP_004178975.1 CDS Isop_1844 NC_014962.1 2691023 2691796 D KEGG: scl:sce4929 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2691023..2691796 Isosphaera pallida ATCC 43644 10155973 YP_004178976.1 CDS Isop_1845 NC_014962.1 2692209 2693198 D COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: psl:Psta_4609 protein of unknown function DUF323; PFAM: protein of unknown function DUF323; SPTR: Putative uncharacterized protein; PFAM: Formylglycine-generating sulfatase enzyme; hypothetical protein 2692209..2693198 Isosphaera pallida ATCC 43644 10155974 YP_004178977.1 CDS Isop_1846 NC_014962.1 2693302 2694231 D KEGG: psl:Psta_4608 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2693302..2694231 Isosphaera pallida ATCC 43644 10155975 YP_004178978.1 CDS Isop_1847 NC_014962.1 2694346 2695041 D InterPro IPR010916; KEGG: psl:Psta_4607 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2694346..2695041 Isosphaera pallida ATCC 43644 10155976 YP_004178979.1 CDS Isop_1848 NC_014962.1 2695095 2695628 R KEGG: caa:Caka_2983 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2695095..2695628) Isosphaera pallida ATCC 43644 10155977 YP_004178980.1 CDS Isop_1849 NC_014962.1 2695946 2696125 D KEGG: bmy:Bm1_35930 Kelch-like protein X; Kelch-like protein X 2695946..2696125 Isosphaera pallida ATCC 43644 10155978 YP_004178981.1 CDS Isop_1850 NC_014962.1 2696450 2698318 D COGs: COG0642 Signal transduction histidine kinase; InterProIPR003660: IPR003661: IPR003594: IPR004358: IPR 005467; KEGG: plm:Plim_3217 ATP-binding region ATPase domain protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SPTR: Sensory transduction histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase 2696450..2698318 Isosphaera pallida ATCC 43644 10155979 YP_004178982.1 CDS Isop_1851 NC_014962.1 2698893 2699507 D KEGG: gga:424533 vitellogenin 2; SPTR: Vitellogenin; hypothetical protein 2698893..2699507 Isosphaera pallida ATCC 43644 10155980 YP_004178983.1 CDS Isop_1853 NC_014962.1 2700481 2703381 D COGs: COG0443 Molecular chaperone; InterPro IPR001023: IPR018181; KEGG: sfu:Sfum_0343 DnaK-related protein; SPTR: DnaK-related protein; PFAM: DNA-K related protein; Hsp70 protein; DnaK-like protein 2700481..2703381 Isosphaera pallida ATCC 43644 10155982 YP_004178984.1 CDS Isop_1854 NC_014962.1 2703439 2704440 R COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: aac:Aaci_2618 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase domain-containing protein complement(2703439..2704440) Isosphaera pallida ATCC 43644 10155983 YP_004178985.1 CDS Isop_1855 NC_014962.1 2705141 2705377 D KEGG: sli:Slin_1397 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2705141..2705377 Isosphaera pallida ATCC 43644 10155984 YP_004178986.1 CDS Isop_1856 NC_014962.1 2705404 2705793 R InterPro IPR004360; KEGG: cja:CJA_0178 glyoxylase family protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxylase family protein; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; glyoxalase/bleomycin resistance protein/dioxygenase complement(2705404..2705793) Isosphaera pallida ATCC 43644 10155985 YP_004178987.1 CDS Isop_1857 NC_014962.1 2706048 2706353 R COGs: COG0254 Ribosomal protein L31; InterPro IPR002150; KEGG: rsl:RPSI07_2195 50S ribosomal protein L31, type B subfamily; PFAM: ribosomal protein L31; SPTR: 50S ribosomal protein L31; TIGRFAM: ribosomal protein L31; PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31; 50S ribosomal protein L31 complement(2706048..2706353) Isosphaera pallida ATCC 43644 10155986 YP_004178988.1 CDS Isop_1858 NC_014962.1 2706657 2708504 D InterPro IPR019794; KEGG: mmr:Mmar10_1967 flagellin modification protein FlmD; SPTR: Flagellin modification protein FlmD; hypothetical protein 2706657..2708504 Isosphaera pallida ATCC 43644 10155987 YP_004178989.1 CDS Isop_1859 NC_014962.1 2708583 2711246 R KEGG: sli:Slin_3037 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Prolyl oligopeptidase family; hypothetical protein complement(2708583..2711246) Isosphaera pallida ATCC 43644 10155988 YP_004178990.1 CDS Isop_1860 NC_014962.1 2711581 2711904 D InterPro IPR007167; KEGG: tit:Thit_1666 FeoA family protein; PFAM: FeoA family protein; SPTR: FeoA family protein; PFAM: FeoA domain; FeoA family protein 2711581..2711904 Isosphaera pallida ATCC 43644 10155989 YP_004178991.1 CDS Isop_1861 NC_014962.1 2711901 2712167 D COGs: COG1918 Fe2+ transport system protein A; InterPro IPR007167; KEGG: det:DET0097 iron dependent repressor, putative; PFAM: FeoA family protein; SPTR: Iron dependent repressor, putative; PFAM: FeoA domain; FeoA family protein 2711901..2712167 Isosphaera pallida ATCC 43644 10155990 YP_004178992.1 CDS Isop_1862 NC_014962.1 2712204 2712890 R KEGG: gbr:Gbro_0510 colicin V production protein; SPTR: Colicin V production protein; hypothetical protein complement(2712204..2712890) Isosphaera pallida ATCC 43644 10155991 YP_004178993.1 CDS Isop_1863 NC_014962.1 2713455 2715779 D COGs: COG0370 Fe2+ transport system protein B; InterProIPR002917: IPR011619: IPR011642: IPR011640: IPR 006073: IPR005225: IPR003373; KEGG: psl:Psta_2393 ferrous iron transport protein B; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain-containing protein; nucleoside recognition domain protein; Ferrous iron transport B domain-containing protein; SPTR: Ferrous iron transport protein b; TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain; ferrous iron transport protein B 2713455..2715779 Isosphaera pallida ATCC 43644 10155992 YP_004178994.1 CDS Isop_1864 NC_014962.1 2715858 2716190 D KEGG: cme:CMB008C similar to vacuolar sorting protein DID4; SPTR: NimA-related protein kinase 8; hypothetical protein 2715858..2716190 Isosphaera pallida ATCC 43644 10155993 YP_004178995.1 CDS Isop_1865 NC_014962.1 2716346 2717329 D COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307: IPR017909; KEGG: psl:Psta_2217 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: Probable IolI protein; PFAM: Xylose isomerase-like TIM barrel; xylose isomerase domain-containing protein 2716346..2717329 Isosphaera pallida ATCC 43644 10155994 YP_004178996.1 CDS Isop_1866 NC_014962.1 2717531 2718382 R COGs: COG0413 Ketopantoate hydroxymethyltransferase; InterPro IPR003700; KEGG: psl:Psta_1348 3-methyl-2-oxobutanoatehydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; PRIAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; SPTR: 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; ketopantoate hydroxymethyltransferase complement(2717531..2718382) Isosphaera pallida ATCC 43644 10155995 YP_004178997.1 CDS Isop_1867 NC_014962.1 2718457 2719950 R COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR006094: IPR004113: IPR016166; KEGG: psl:Psta_2649 FAD linked oxidase domain protein; PFAM: FAD linked oxidase domain protein; SPTR: Glycolate oxidase subunit; PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD; FAD linked oxidase domain-containing protein complement(2718457..2719950) Isosphaera pallida ATCC 43644 10155996 YP_004178998.1 CDS Isop_1868 NC_014962.1 2720187 2723159 D KEGG: psl:Psta_3802 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2720187..2723159 Isosphaera pallida ATCC 43644 10155997 YP_004178999.1 CDS Isop_1869 NC_014962.1 2723156 2724193 D COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: rba:RB279 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter, ATP-binding protein; PFAM: ABC transporter; ABC transporter-like protein 2723156..2724193 Isosphaera pallida ATCC 43644 10155998 YP_004179000.1 CDS Isop_1870 NC_014962.1 2724350 2726059 D KEGG: psl:Psta_4021 ABC-2 type transporter; SPTR: ABC-2 type transporter; PFAM: ABC-2 type transporter; ABC-2 type transporter 2724350..2726059 Isosphaera pallida ATCC 43644 10155999 YP_004179001.1 CDS Isop_1871 NC_014962.1 2726059 2727966 D InterPro IPR013525; KEGG: plm:Plim_3249 hypothetical protein; PFAM: ABC-2 type transporter; SPTR: Putative uncharacterized protein; ABC-2 type transporter 2726059..2727966 Isosphaera pallida ATCC 43644 10156000 YP_004179002.1 CDS Isop_1872 NC_014962.1 2728115 2729062 R InterPro IPR001440: IPR019734: IPR013026; KEGG: rpt:Rpal_2530 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: TPR repeat-containing protein; PFAM: Tetratricopeptide repeat; hypothetical protein complement(2728115..2729062) Isosphaera pallida ATCC 43644 10156001 YP_004179003.1 CDS Isop_1873 NC_014962.1 2729251 2730234 R COGs: COG0180 Tryptophanyl-tRNA synthetase; InterPro IPR002305: IPR002306: IPR001412; KEGG: plm:Plim_0771 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; PRIAM: Tryptophan--tRNA ligase; SPTR: Tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase; tryptophanyl-tRNA synthetase complement(2729251..2730234) Isosphaera pallida ATCC 43644 10156002 YP_004179004.1 CDS Isop_1874 NC_014962.1 2730562 2731422 D KEGG: dfe:Dfer_2054 signal peptide; SPTR: Membrane-bound dehydrogenase domain protein; PFAM: Trehalose utilisation; hypothetical protein 2730562..2731422 Isosphaera pallida ATCC 43644 10156003 YP_004179005.1 CDS Isop_1875 NC_014962.1 2731579 2732412 R COGs: COG2091 Phosphopantetheinyl transferase; InterPro IPR008278; KEGG: ava:Ava_2597 4'-phosphopantetheinyl transferase; PFAM: 4'-phosphopantetheinyl transferase; SPTR: 4'-phosphopantetheinyl transferase; PFAM: 4'-phosphopantetheinyl transferase superfamily; 4'-phosphopantetheinyl transferase complement(2731579..2732412) Isosphaera pallida ATCC 43644 10156004 YP_004179006.1 CDS Isop_1876 NC_014962.1 2732473 2733078 R InterPro IPR003716; KEGG: plm:Plim_2053 DNA-directed RNA polymerase, omega subunit; SPTR: DNA-directed RNA polymerase subunit omega; TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; DNA-directed RNA polymerase subunit omega complement(2732473..2733078) Isosphaera pallida ATCC 43644 10156005 YP_004179007.1 CDS Isop_1877 NC_014962.1 2733181 2733819 R COGs: COG0194 Guanylate kinase; InterProIPR008144: IPR008145: IPR017665: IPR022272: IPR 020590; KEGG: rxy:Rxyl_1473 guanylate kinase; PFAM: guanylate kinase; PRIAM: Guanylate kinase; SMART: guanylate kinase/L-type calcium channel region; SPTR: Guanylate kinase; TIGRFAM: guanylate kinase; PFAM: Guanylate kinase; TIGRFAM: guanylate kinase; guanylate kinase complement(2733181..2733819) Isosphaera pallida ATCC 43644 10156006 YP_004179008.1 CDS Isop_1878 NC_014962.1 2733916 2734068 D hypothetical protein 2733916..2734068 Isosphaera pallida ATCC 43644 10156007 YP_004179009.1 CDS Isop_1879 NC_014962.1 2734053 2734997 R COGs: COG1561 Uncharacterized stress-induced protein; InterPro IPR013527: IPR013551: IPR005229; KEGG: rba:RB7091 hypothetical protein; PFAM: domain of unknown function DUF1732; YicC-like domain-containing protein; SPTR: Putative uncharacterized protein; PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: conserved hypothetical protein TIGR00255; hypothetical protein complement(2734053..2734997) Isosphaera pallida ATCC 43644 10156008 YP_004179010.1 CDS Isop_1880 NC_014962.1 2735252 2735620 R InterPro IPR004692; KEGG: psl:Psta_3127 preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; SPTR: Putative uncharacterized protein; TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit; preprotein translocase subunit SecG complement(2735252..2735620) Isosphaera pallida ATCC 43644 10156009 YP_004179011.1 CDS Isop_1881 NC_014962.1 2735910 2736698 R COGs: COG0149 Triosephosphate isomerase; InterPro IPR000652: IPR020861; KEGG: ote:Oter_3825 triose-phosphate isomerase; PFAM: triosephosphate isomerase; PRIAM: Triose-phosphate isomerase; SPTR: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; triosephosphate isomerase complement(2735910..2736698) Isosphaera pallida ATCC 43644 10156010 YP_004179012.1 CDS Isop_1882 NC_014962.1 2737264 2741241 D COGs: COG0515 Serine/threonine protein kinase; InterProIPR017442: IPR001440: IPR020635: IPR002290: IPR 019734: IPR002151: IPR017441: IPR008271: IPR000719: IPR013026; KEGG: aba:Acid345_2310 TPR repeat-containing serine/threonin protein kinase; PFAM: Serine/threonine-protein kinase-like domain; Tetratricopeptide TPR_1 repeat-containing protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; Tetratricopeptide repeat; SPTR: Putative serine/threonine protein kinase; PFAM: Protein kinase domain; serine/threonine protein kinase 2737264..2741241 Isosphaera pallida ATCC 43644 10156011 YP_004179013.1 CDS Isop_1883 NC_014962.1 2741399 2742994 D COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: rbi:RB2501_14084 probable aminopeptidase; PFAM: peptidase M28; SPTR: Peptidase M28; PFAM: Peptidase family M28; peptidase M28 2741399..2742994 Isosphaera pallida ATCC 43644 10156012 YP_004179014.1 CDS Isop_1884 NC_014962.1 2743185 2743811 D COGs: COG0118 Glutamine amidotransferase; InterPro IPR000991: IPR016226: IPR010139: IPR017926; KEGG: plm:Plim_2081 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; SPTR: Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; imidazole glycerol phosphate synthase subunit hisH 2743185..2743811 Isosphaera pallida ATCC 43644 10156013 YP_004179015.1 CDS Isop_1885 NC_014962.1 2744003 2744731 D COGs: COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; InterPro IPR006062: IPR006063; KEGG: msl:Msil_2551 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein; PRIAM:1-(5-phosphoribosyl)-5-((5-phosphoribosylamin o)methylideneamino)imidazole-4-carboxamideisomerase; SPTR:1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 2744003..2744731 Isosphaera pallida ATCC 43644 10156014 YP_004179016.1 CDS Isop_1886 NC_014962.1 2744867 2746930 D COGs: COG0480 Translation elongation factors (GTPase); InterProIPR000795: IPR004161: IPR005517: IPR000640: IPR 005225: IPR018116; KEGG: sth:STH3140 protein translation elongation factor G; PFAM: elongation factor G domain IV; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein; SPTR: Protein translation elongation factor G; TIGRFAM: small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; small GTP-binding protein 2744867..2746930 Isosphaera pallida ATCC 43644 10156015 YP_004179017.1 CDS Isop_1887 NC_014962.1 2747242 2748567 R COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR006311: IPR017909; KEGG: rsl:RPSI07_2135 putative oxidoreductase; PFAM: oxidoreductase domain protein; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase domain-containing protein complement(2747242..2748567) Isosphaera pallida ATCC 43644 10156016 YP_004179018.1 CDS Isop_1888 NC_014962.1 2748964 2749299 R KEGG: pkn:PKH_127070 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2748964..2749299) Isosphaera pallida ATCC 43644 10156017 YP_004179019.1 CDS Isop_1889 NC_014962.1 2749399 2749527 R hypothetical protein complement(2749399..2749527) Isosphaera pallida ATCC 43644 10156018 YP_004179020.1 CDS Isop_1890 NC_014962.1 2749929 2750165 R KEGG: bta:521058 collagen, type XXII, alpha 1; SPTR: Putative uncharacterized protein Sb02g041242; hypothetical protein complement(2749929..2750165) Isosphaera pallida ATCC 43644 10156019 YP_004179021.1 CDS Isop_1891 NC_014962.1 2750650 2752014 D COGs: COG0108 3 4-dihydroxy-2-butanone 4-phosphate synthase; InterPro IPR000422: IPR000926: IPR016299; KEGG: psl:Psta_2110 GTP cyclohydrolase II; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; SPTR: Riboflavin biosynthesis protein RibA; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II 2750650..2752014 Isosphaera pallida ATCC 43644 10156020 YP_004179022.1 CDS Isop_1892 NC_014962.1 2752135 2753067 D InterPro IPR006342; KEGG: mar:MAE_13110 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: methyltransferase FkbM family; TIGRFAM: methyltransferase, FkbM family; FkbM family methyltransferase 2752135..2753067 Isosphaera pallida ATCC 43644 10156021 YP_004179023.1 CDS Isop_1893 NC_014962.1 2753261 2755465 R COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR011659; KEGG: kko:Kkor_1452 peptidase S9 prolyl oligopeptidase active site domain protein; PFAM: WD40-like beta Propeller containing protein; PRIAM: Acylaminoacyl-peptidase; SPTR: Putative uncharacterized protein; PFAM: Prolyl oligopeptidase family; acylaminoacyl-peptidase complement(2753261..2755465) Isosphaera pallida ATCC 43644 10156022 YP_004179024.1 CDS Isop_1894 NC_014962.1 2755743 2756174 D KEGG: cse:Cseg_2143 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2755743..2756174 Isosphaera pallida ATCC 43644 10156023 YP_004179025.1 CDS Isop_1895 NC_014962.1 2756350 2757507 R COGs: COG1060 Thiamine biosynthesis protein ThiH; InterPro IPR007197: IPR005244: IPR020050; KEGG: plm:Plim_0097 radical SAM domain protein; PFAM: Radical SAM domain protein; SPTR: Putative uncharacterized protein; PFAM: Radical SAM superfamily; TIGRFAM: putative menaquinone biosynthesis protein, SCO4494 family; radical SAM domain protein, CofH subfamily; radical SAM protein complement(2756350..2757507) Isosphaera pallida ATCC 43644 10156024 YP_004179026.1 CDS Isop_1896 NC_014962.1 2757727 2758338 R COGs: COG1437 Adenylate cyclase class 2 (thermophilic); InterPro IPR008172: IPR008173; KEGG: rba:RB6328 adenylyl cyclase related protein; PFAM: adenylate cyclase; SPTR: Adenylyl cyclase related protein; TIGRFAM: adenylyl cyclase CyaB; PFAM: CYTH domain; TIGRFAM: adenylyl cyclase CyaB, putative; adenylyl cyclase CyaB complement(2757727..2758338) Isosphaera pallida ATCC 43644 10156025 YP_004179027.1 CDS Isop_1897 NC_014962.1 2759351 2760559 D COGs: COG3330 conserved hypothetical protein; KEGG: psl:Psta_4403 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2759351..2760559 Isosphaera pallida ATCC 43644 10156026 YP_004179028.1 CDS Isop_1898 NC_014962.1 2760801 2761661 R COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR009042: IPR007627: IPR007624: IPR007630: IPR 000943: IPR014284: IPR005479; KEGG: psl:Psta_2413 RNA polymerase, sigma 70 subunit, RpoD subfamily; PFAM: sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RpoD subfamily RNA polymerase sigma-70 factor complement(2760801..2761661) Isosphaera pallida ATCC 43644 10156027 YP_004179029.1 CDS Isop_1900 NC_014962.1 2762308 2762763 R KEGG: rmr:Rmar_0460 VanZ family protein; SPTR: VanZ family protein; hypothetical protein complement(2762308..2762763) Isosphaera pallida ATCC 43644 10156029 YP_004179030.1 CDS Isop_1901 NC_014962.1 2763062 2764288 D COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: afw:Anae109_1425 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1 family protein; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase 2763062..2764288 Isosphaera pallida ATCC 43644 10156031 YP_004179031.1 CDS Isop_1902 NC_014962.1 2764504 2766621 R COGs: COG0515 Serine/threonine protein kinase; InterProIPR017442: IPR020635: IPR002290: IPR017441: IPR 000719; KEGG: plm:Plim_3400 serine/threonine protein kinase-related protein; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase-related protein; PFAM: Protein kinase domain; serine/threonine protein kinase complement(2764504..2766621) Isosphaera pallida ATCC 43644 10156032 YP_004179032.1 CDS Isop_1903 NC_014962.1 2767124 2768614 D COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: chu:CHU_0890 A-glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: A-glycosyltransferase, glycosyltransferase family 4 protein; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase 2767124..2768614 Isosphaera pallida ATCC 43644 10156033 YP_004179033.1 CDS Isop_1904 NC_014962.1 2768653 2769993 D KEGG: chu:CHU_0867 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2768653..2769993 Isosphaera pallida ATCC 43644 10156034 YP_004179034.1 CDS Isop_1905 NC_014962.1 2770074 2771363 D COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sfu:Sfum_3338 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1 family protein; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase 2770074..2771363 Isosphaera pallida ATCC 43644 10156035 YP_004179035.1 CDS Isop_1906 NC_014962.1 2771360 2773681 D COGs: COG0438 Glycosyltransferase; InterPro IPR001296: IPR001173; KEGG: ote:Oter_3266 glycosyl transferase family protein; PFAM: glycosyl transferase group 1; glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferases group 1; Glycosyl transferase family 2; group 1 glycosyl transferase 2771360..2773681 Isosphaera pallida ATCC 43644 10156036 YP_004179036.1 CDS Isop_1907 NC_014962.1 2773934 2774683 R InterPro IPR010496; KEGG: sus:Acid_0701 hypothetical protein; PFAM: protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF1080); hypothetical protein complement(2773934..2774683) Isosphaera pallida ATCC 43644 10156037 YP_004179037.1 CDS Isop_1908 NC_014962.1 2775118 2775357 R KEGG: nhl:Nhal_0677 methane monooxygenase/ammonia monooxygenase, subunit B; SPTR: Methane monooxygenase/ammonia monooxygenase, subunit B; hypothetical protein complement(2775118..2775357) Isosphaera pallida ATCC 43644 10156038 YP_004179038.1 CDS Isop_1909 NC_014962.1 2775481 2776722 D COGs: COG3839 ABC-type sugar transport systems ATPase components; InterPro IPR003439: IPR003593: IPR017871; KEGG: fre:Franean1_5458 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter; ABC transporter-like protein 2775481..2776722 Isosphaera pallida ATCC 43644 10156039 YP_004179039.1 CDS Isop_1910 NC_014962.1 2776871 2777431 D KEGG: tgu:100190202 WW domain binding protein 2-like; SPTR: GA12129; hypothetical protein 2776871..2777431 Isosphaera pallida ATCC 43644 10156040 YP_004179040.1 CDS Isop_1911 NC_014962.1 2777512 2779023 D InterPro IPR006311: IPR017909; KEGG: psl:Psta_0688 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2777512..2779023 Isosphaera pallida ATCC 43644 10156041 YP_004179041.1 CDS Isop_1912 NC_014962.1 2779266 2782643 R InterPro IPR003088: IPR013428: IPR013427: IPR009056; KEGG: plm:Plim_0902 heme-binding protein; PFAM: cytochrome c class I; SPTR: Heme-binding protein; TIGRFAM: membrane-bound dehydrogenase domain protein; heme-binding protein; PFAM: Cytochrome c; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type; membrane-bound dehydrogenase domain-containing protein complement(2779266..2782643) Isosphaera pallida ATCC 43644 10156042 YP_004179042.1 CDS Isop_1913 NC_014962.1 2782919 2784316 R InterPro IPR004843; KEGG: sli:Slin_6603 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: Putative uncharacterized protein; PFAM: Calcineurin-like phosphoesterase; metallophosphoesterase complement(2782919..2784316) Isosphaera pallida ATCC 43644 10156043 YP_004179043.1 CDS Isop_1914 NC_014962.1 2784502 2785416 R COGs: COG3375 conserved hypothetical protein; KEGG: tpe:Tpen_1785 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2784502..2785416) Isosphaera pallida ATCC 43644 10156044 YP_004179044.1 CDS Isop_1915 NC_014962.1 2785450 2786667 R COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933: IPR011650: IPR017150: IPR001261; KEGG: cag:Cagg_3807 peptidase M20; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: Peptidase M20; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; peptidase M20 complement(2785450..2786667) Isosphaera pallida ATCC 43644 10156045 YP_004179045.1 CDS Isop_1916 NC_014962.1 2786716 2787825 R COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR003782: IPR007352: IPR017936; KEGG: plm:Plim_0216 protein of unknown function DUF420; PFAM: protein of unknown function DUF420; electron transport protein SCO1/SenC; SPTR: Putative uncharacterized protein; PFAM: SCO1/SenC; Protein of unknown function (DUF420); hypothetical protein complement(2786716..2787825) Isosphaera pallida ATCC 43644 10156046 YP_004179046.1 CDS Isop_1917 NC_014962.1 2788156 2788860 R KEGG: tml:GSTUM_00009071001 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2788156..2788860) Isosphaera pallida ATCC 43644 10156047 YP_004179047.1 CDS Isop_1918 NC_014962.1 2789137 2790225 R InterPro IPR000792: IPR014284; KEGG: sli:Slin_5409 two component transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; SPTR: Two component transcriptional regulator, LuxR family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Bacterial regulatory proteins, luxR family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 familyRNA polymerase sigma factor complement(2789137..2790225) Isosphaera pallida ATCC 43644 10156048 YP_004179048.1 CDS Isop_1919 NC_014962.1 2790373 2790585 R SPTR: Putative uncharacterized protein; hypothetical protein complement(2790373..2790585) Isosphaera pallida ATCC 43644 10156049 YP_004179049.1 CDS Isop_1920 NC_014962.1 2790917 2792437 R KEGG: plm:Plim_3404 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Natural resistance-associated macrophage protein; hypothetical protein complement(2790917..2792437) Isosphaera pallida ATCC 43644 10156050 YP_004179050.1 CDS Isop_1921 NC_014962.1 2792961 2793332 R KEGG: slt:Slit_2521 S23 ribosomal protein; SPTR: S23 ribosomal protein; manually curated; PFAM: S23 ribosomal protein; S23 ribosomal protein complement(2792961..2793332) Isosphaera pallida ATCC 43644 10156051 YP_004179051.1 CDS Isop_1922 NC_014962.1 2793792 2796914 R COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterProIPR020046: IPR020047: IPR001098: IPR002421: IPR 008918: IPR002298: IPR018320: IPR019760; KEGG: plm:Plim_3011 DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; SMART: DNA-directed DNA polymerase; 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; SPTR: DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: 5'-3' exonuclease, C-terminal SAM fold; 5'-3' exonuclease, N-terminal resolvase-like domain; DNA polymerase family A; TIGRFAM: DNA polymerase I; DNA polymerase I complement(2793792..2796914) Isosphaera pallida ATCC 43644 10156052 YP_004179052.1 CDS Isop_1923 NC_014962.1 2797514 2799145 D KEGG: psl:Psta_3786 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2797514..2799145 Isosphaera pallida ATCC 43644 10156053 YP_004179053.1 CDS Isop_1924 NC_014962.1 2799450 2800601 R COGs: COG0372 Citrate synthase; InterPro IPR002020: IPR011278: IPR019810; KEGG: psl:Psta_3158 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase; PRIAM: Citrate (Si)-synthase; SPTR: 2-methylcitrate synthase/citrate synthase II; TIGRFAM: 2-methylcitrate synthase/citrate synthase II; PFAM: Citrate synthase; TIGRFAM: 2-methylcitrate synthase/citrate synthase II; citrate synthase complement(2799450..2800601) Isosphaera pallida ATCC 43644 10156054 YP_004179054.1 CDS Isop_1925 NC_014962.1 2801151 2801969 D COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198: IPR002347: IPR020904; KEGG: psl:Psta_2335 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 2801151..2801969 Isosphaera pallida ATCC 43644 10156055 YP_004179055.1 CDS Isop_1926 NC_014962.1 2802221 2803129 R COGs: COG2267 Lysophospholipase; InterPro IPR000073; KEGG: bam:Bamb_0934 alpha/beta hydrolase fold; PFAM: alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase fold protein; PFAM: Putative lysophospholipase; alpha/beta hydrolase fold protein complement(2802221..2803129) Isosphaera pallida ATCC 43644 10156056 YP_004179056.1 CDS Isop_1927 NC_014962.1 2803126 2803797 R COGs: COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase; InterPro IPR013216; KEGG: psl:Psta_2332 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: Methyltransferase domain; type 11 methyltransferase complement(2803126..2803797) Isosphaera pallida ATCC 43644 10156057 YP_004179057.1 CDS Isop_1928 NC_014962.1 2803866 2805518 R COGs: COG0322 Nuclease subunit of the excinuclease complex; InterPro IPR000305: IPR001943: IPR001162; KEGG: rba:RB7010 excinuclease ABC subunit C; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; UvrB/UvrC protein; SMART: Excinuclease ABC C subunit domain protein; SPTR: Excinuclease ABC subunit C; PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit; excinuclease ABC subunit C domain-containing protein complement(2803866..2805518) Isosphaera pallida ATCC 43644 10156058 YP_004179058.1 CDS Isop_1929 NC_014962.1 2806115 2807212 D KEGG: amr:AM1_0371 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2806115..2807212 Isosphaera pallida ATCC 43644 10156059 YP_004179059.1 CDS Isop_1930 NC_014962.1 2807400 2808677 R COGs: COG2267 Lysophospholipase; InterPro IPR000073; KEGG: lic:LIC11875 putative hydrolase; PFAM: alpha/beta hydrolase fold; SPTR: Putative hydrolase; PFAM: ab-hydrolase associated lipase region; alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(2807400..2808677) Isosphaera pallida ATCC 43644 10156060 YP_004179060.1 CDS Isop_1931 NC_014962.1 2809035 2810138 R COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000253: IPR000160; KEGG: scl:sce8626 FHA domain-containing protein; PFAM: GGDEF domain containing protein; Forkhead-associated protein; SMART: GGDEF domain containing protein; Forkhead-associated protein; SPTR: FHA domain protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; FHA domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase complement(2809035..2810138) Isosphaera pallida ATCC 43644 10156061 YP_004179061.1 CDS Isop_1932 NC_014962.1 2810462 2810989 R COGs: COG2077 Peroxiredoxin; InterPro IPR013740: IPR017936; KEGG: glo:Glov_2959 redoxin domain protein; PFAM: Redoxin domain protein; SPTR: Redoxin domain protein; PFAM: Redoxin; thiol peroxidase complement(2810462..2810989) Isosphaera pallida ATCC 43644 10156062 YP_004179062.1 CDS Isop_1933 NC_014962.1 2811361 2811624 D KEGG: dvu:DVU2153 tail fiber protein, putative; SPTR: Tail fiber protein, putative; hypothetical protein 2811361..2811624 Isosphaera pallida ATCC 43644 10156063 YP_004179063.1 CDS Isop_1934 NC_014962.1 2811868 2813727 D COGs: COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division; InterPro IPR002218: IPR013027: IPR004416: IPR020595; KEGG: plm:Plim_2536 glucose inhibited division protein A; PFAM: glucose-inhibited division protein A; SPTR: tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG; TIGRFAM: glucose inhibited division protein A; PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A; glucose inhibited division protein A 2811868..2813727 Isosphaera pallida ATCC 43644 10156064 YP_004179064.1 CDS Isop_1935 NC_014962.1 2814305 2814898 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR010093; KEGG: plm:Plim_2544 DNA binding domain protein, excisionase family; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Probable regulatory components of sensory transduction system; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: Response regulator receiver domain; TIGRFAM: DNA binding domain, excisionase family; response regulator receiver protein 2814305..2814898 Isosphaera pallida ATCC 43644 10156065 YP_004179065.1 CDS Isop_1936 NC_014962.1 2815101 2817179 D COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661: IPR003594: IPR004358: IPR005467; KEGG: psl:Psta_1094 histidine kinase; PFAM: histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: histidine kinase A domain protein; ATP-binding region ATPase domain protein; SPTR: Histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; histidine kinase 2815101..2817179 Isosphaera pallida ATCC 43644 10156066 YP_004179066.1 CDS Isop_1937 NC_014962.1 2817939 2820167 D COGs: COG1668 ABC-type Na+ efflux pump permease component; InterPro IPR003675; KEGG: psl:Psta_2528 abortive infection protein; PFAM: Abortive infection protein; SPTR: Probable sodium extrusion protein NatB; PFAM: CAAX amino terminal protease family; abortive infection protein 2817939..2820167 Isosphaera pallida ATCC 43644 10156067 YP_004179067.1 CDS Isop_1938 NC_014962.1 2820164 2820946 D COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: rba:RB7633 sodium ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter (ATP-binding protein)-putative sodium extrusion ABC transporter; PFAM: ABC transporter; ABC transporter-like protein 2820164..2820946 Isosphaera pallida ATCC 43644 10156068 YP_004179068.1 CDS Isop_1939 NC_014962.1 2821244 2822041 R KEGG: sma:SAV_5137 dehydrogenase; SPTR: Putative dehydrogenase; hypothetical protein complement(2821244..2822041) Isosphaera pallida ATCC 43644 10156069 YP_004179069.1 CDS Isop_1940 NC_014962.1 2822167 2823057 R COGs: COG1606 ATP-utilizing protein of the PP-loop superfamily; InterPro IPR001962: IPR005232; KEGG: psl:Psta_4402 ExsB family protein; PFAM: asparagine synthase; SPTR: ExsB family protein; manually curated; PFAM: Asparagine synthase; TIGRFAM: conserved hypothetical protein TIGR00268; asparagine synthase complement(2822167..2823057) Isosphaera pallida ATCC 43644 10156070 YP_004179070.1 CDS Isop_1941 NC_014962.1 2823538 2824545 R COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR013154: IPR013149: IPR014189; KEGG: mxa:MXAN_4429 PIG3 family NAD(P)H quinone oxidoreductase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; SPTR: NAD(P)H quinone oxidoreductase, PIG3 family; TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: putative NAD(P)H quinone oxidoreductase, PIG3 family; NAD(P)H quinone oxidoreductase complement(2823538..2824545) Isosphaera pallida ATCC 43644 10156071 YP_004179071.1 CDS Isop_1942 NC_014962.1 2824607 2826796 R KEGG: afw:Anae109_2789 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2824607..2826796) Isosphaera pallida ATCC 43644 10156072 YP_004179072.1 CDS Isop_1943 NC_014962.1 2826786 2827535 R InterPro IPR004861: IPR016130: IPR000387; KEGG: gme:Gmet_0085 protein tyrosine/serine phosphatase; PFAM: tyrosine phosphatase; SPTR: Protein tyrosine/serine phosphatase; PFAM: Tyrosine phosphatase family; tyrosine phosphatase complement(2826786..2827535) Isosphaera pallida ATCC 43644 10156073 YP_004179073.1 CDS Isop_1944 NC_014962.1 2827968 2830283 D InterPro IPR011444: IPR009056; KEGG: rba:RB13137 hypothetical protein; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553); hypothetical protein 2827968..2830283 Isosphaera pallida ATCC 43644 10156074 YP_004179074.1 CDS Isop_1945 NC_014962.1 2830382 2831899 D InterPro IPR010869: IPR006311: IPR006186; KEGG: psl:Psta_3350 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501); hypothetical protein 2830382..2831899 Isosphaera pallida ATCC 43644 10156075 YP_004179075.1 CDS Isop_1946 NC_014962.1 2831964 2833154 R COGs: COG0349 Ribonuclease D; InterPro IPR002562: IPR002121: IPR006292; KEGG: plm:Plim_0672 ribonuclease D; PFAM: 3'-5' exonuclease; HRDC domain protein; PRIAM: Ribonuclease D; SMART: 3'-5' exonuclease; HRDC domain protein; SPTR: Ribonuclease D; TIGRFAM: ribonuclease D; PFAM: HRDC domain; 3'-5' exonuclease; TIGRFAM: ribonuclease D; ribonuclease D complement(2831964..2833154) Isosphaera pallida ATCC 43644 10156076 YP_004179076.1 CDS Isop_1947 NC_014962.1 2833369 2835948 D COGs: COG0515 Serine/threonine protein kinase; InterProIPR017442: IPR005532: IPR020635: IPR002290: IPR 017441: IPR008271: IPR000719; KEGG: plm:Plim_1535 serine/threonine protein kinase-related protein; PFAM: Serine/threonine-protein kinase-like domain; protein of unknown function DUF323; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase-related protein; PFAM: Protein kinase domain; Formylglycine-generating sulfatase enzyme; serine/threonine protein kinase 2833369..2835948 Isosphaera pallida ATCC 43644 10156077 YP_004179077.1 CDS Isop_1948 NC_014962.1 2835986 2836909 R KEGG: afw:Anae109_0871 TonB family protein; SPTR: Kexin-like serine endoprotease; hypothetical protein complement(2835986..2836909) Isosphaera pallida ATCC 43644 10156078 YP_004179078.1 CDS Isop_1949 NC_014962.1 2837126 2838577 R COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR002550: IPR000644: IPR005170; KEGG: msv:Mesil_2233 protein of unknown function DUF21; PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SPTR: Putative uncharacterized protein; PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; hypothetical protein complement(2837126..2838577) Isosphaera pallida ATCC 43644 10156079 YP_004179079.1 CDS Isop_1950 NC_014962.1 2838827 2840743 R COGs: COG1290 Cytochrome b subunit of the bc complex; InterPro IPR005797: IPR009056; KEGG: gau:GAU_0696 putative menaquinol-cytochrome c reductase cytochrome b/c subunit; PFAM: Cytochrome b/b6 domain; SPTR: Putative menaquinol-cytochrome c reductase cytochrome b/c subunit; PFAM: Cytochrome c; Cytochrome b(C-terminal)/b6/petD; cytochrome b/b6 protein complement(2838827..2840743) Isosphaera pallida ATCC 43644 10156080 YP_004179080.1 CDS Isop_1951 NC_014962.1 2840748 2841338 R InterPro IPR017941; KEGG: plm:Plim_0423 Rieske (2Fe-2S) domain protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: Menaquinol-cytochrome c reductase, iron-sulfur subunit; PFAM: Rieske [2Fe-2S] domain; Rieske (2Fe-2S) domain-containing protein complement(2840748..2841338) Isosphaera pallida ATCC 43644 10156081 YP_004179081.1 CDS Isop_1952 NC_014962.1 2841633 2841959 R COGs: COG1716 FOG: FHA domain; InterPro IPR000253; KEGG: plm:Plim_4219 forkhead-associated protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: Forkhead-associated protein; PFAM: FHA domain; FHA domain-containing protein complement(2841633..2841959) Isosphaera pallida ATCC 43644 10156082 YP_004179082.1 CDS Isop_1953 NC_014962.1 2842023 2842841 R COGs: COG1716 FOG: FHA domain; InterPro IPR000253; KEGG: plm:Plim_4219 forkhead-associated protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: FHA domain containing protein; PFAM: FHA domain; FHA domain-containing protein complement(2842023..2842841) Isosphaera pallida ATCC 43644 10156083 YP_004179083.1 CDS Isop_1954 NC_014962.1 2843032 2843187 D hypothetical protein 2843032..2843187 Isosphaera pallida ATCC 43644 10156084 YP_004179084.1 CDS Isop_1955 NC_014962.1 2843270 2844412 R COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: neu:NE1170 putative dihydroflavonol-4-reductase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: hopanoid-associated sugar epimerase; NAD-dependent epimerase/dehydratase complement(2843270..2844412) Isosphaera pallida ATCC 43644 10156085 YP_004179085.1 CDS Isop_1956 NC_014962.1 2844409 2846610 R KEGG: plm:Plim_0336 hypothetical protein; SPTR: Dolichyl-phosphate-mannose-protein mannosyltransferase protein; hypothetical protein complement(2844409..2846610) Isosphaera pallida ATCC 43644 10156086 YP_004179086.1 CDS Isop_1957 NC_014962.1 2846913 2848397 R KEGG: rba:RB10292 signal peptide; SPTR: Putative uncharacterized protein; hypothetical protein complement(2846913..2848397) Isosphaera pallida ATCC 43644 10156087 YP_004179087.1 CDS Isop_1958 NC_014962.1 2849215 2850798 D COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478: IPR001940; KEGG: psl:Psta_3797 peptidase S1 and S6 chymotrypsin/Hap; PFAM: PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: Peptidase S1 and S6 chymotrypsin/Hap; PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); PDZ/DHR/GLGF domain-containing protein 2849215..2850798 Isosphaera pallida ATCC 43644 10156088 YP_004179088.1 CDS Isop_1959 NC_014962.1 2850961 2853585 D COGs: COG0013 Alanyl-tRNA synthetase; InterProIPR018164: IPR012947: IPR003156: IPR002318: IPR 018165; KEGG: plm:Plim_2551 alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; Threonyl/alanyl tRNA synthetase SAD; phosphoesterase DHHA1; SPTR: Alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase; alanyl-tRNA synthetase 2850961..2853585 Isosphaera pallida ATCC 43644 10156089 YP_004179089.1 CDS Isop_1960 NC_014962.1 2853964 2854338 R COGs: COG2127 conserved hypothetical protein; InterPro IPR003769; KEGG: rxy:Rxyl_2055 ATP-dependent Clp protease adaptor protein ClpS; PFAM: ATP-dependent Clp protease adaptor protein ClpS; SPTR: ATP-dependent Clp protease adaptor protein ClpS; PFAM: ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS complement(2853964..2854338) Isosphaera pallida ATCC 43644 10156090 YP_004179090.1 CDS Isop_1961 NC_014962.1 2854600 2854938 D KEGG: mcc:705891 Rho guanine nucleotide exchange factor (GEF) 5; SPTR: Small Conductance Mechanosensitive ion Channel family protein; hypothetical protein 2854600..2854938 Isosphaera pallida ATCC 43644 10156091 YP_004179091.1 CDS Isop_1962 NC_014962.1 2854935 2856365 D COGs: COG1092 SAM-dependent methyltransferase; InterPro IPR013216; KEGG: psl:Psta_1671 protein of unknown function Met10; PFAM: Methyltransferase type 11; SPTR: Putative uncharacterized protein; PFAM: S-adenosylmethionine-dependent methyltransferase; type 11 methyltransferase 2854935..2856365 Isosphaera pallida ATCC 43644 10156092 YP_004179092.1 CDS Isop_1963 NC_014962.1 2856552 2857721 R COGs: COG0468 RecA/RadA recombinase; InterProIPR013765: IPR003593: IPR001553: IPR020584: IPR 020588: IPR020587; KEGG: plm:Plim_2553 RecA protein; PFAM: RecA domain protein; SMART: AAA ATPase; SPTR: Protein recA; TIGRFAM: recA protein; PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA; recombinase A complement(2856552..2857721) Isosphaera pallida ATCC 43644 10156093 YP_004179093.1 CDS Isop_1964 NC_014962.1 2858170 2859174 D KEGG: vpr:Vpar_1579 DNA repair ATPase-like protein; SPTR: ATPase involved in DNA repair-like protein; hypothetical protein 2858170..2859174 Isosphaera pallida ATCC 43644 10156094 YP_004179094.1 CDS Isop_1965 NC_014962.1 2859298 2861826 D KEGG: psl:Psta_3038 peptidase-like protein; SPTR: Peptidase-like protein; hypothetical protein 2859298..2861826 Isosphaera pallida ATCC 43644 10156095 YP_004179095.1 CDS Isop_1966 NC_014962.1 2861823 2862719 D COGs: COG0561 hydrolase of the HAD superfamily; InterPro IPR013200: IPR000150: IPR006379; KEGG: ttr:Tter_1448 Cof-like hydrolase; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; SPTR: Cof-like hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB; cof family hydrolase 2861823..2862719 Isosphaera pallida ATCC 43644 10156096 YP_004179096.1 CDS Isop_1967 NC_014962.1 2862787 2864562 D InterPro IPR013517: IPR011519; KEGG: sus:Acid_0215 ASPIC/UnbV domain-containing protein; PFAM: ASPIC/UnbV domain protein; FG-GAP repeat protein; SPTR: ASPIC/UnbV domain protein; PFAM: ASPIC and UnbV; FG-GAP repeat; ASPIC/UnbV domain-containing protein 2862787..2864562 Isosphaera pallida ATCC 43644 10156097 YP_004179097.1 CDS Isop_1968 NC_014962.1 2865030 2866439 D COGs: COG0520 Selenocysteine lyase; InterPro IPR000192: IPR010970; KEGG: ace:Acel_1138 SufS subfamily cysteine desulfurase; PFAM: aminotransferase class V; SPTR: Cysteine desulfurases, SufS subfamily; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufS subfamily; cysteine desulfurase 2865030..2866439 Isosphaera pallida ATCC 43644 10156098 YP_004179098.1 CDS Isop_1969 NC_014962.1 2866479 2866904 D COGs: COG0822 NifU homolog involved in Fe-S cluster formation; InterPro IPR002871; KEGG: plm:Plim_1321 nitrogen-fixing NifU domain protein; PFAM: nitrogen-fixing NifU domain protein; SPTR: Nitrogen-fixing NifU domain protein; PFAM: NifU-like N terminal domain; TIGRFAM: SUF system FeS assembly protein, NifU family; nitrogen-fixing NifU domain-containing protein 2866479..2866904 Isosphaera pallida ATCC 43644 10156099 YP_004179099.1 CDS Isop_1970 NC_014962.1 2867027 2871409 R InterPro IPR003961: IPR011658: IPR018247; KEGG: lhk:LHK_00825 cellulose-binding domain protein; PFAM: Fibronectin type III domain protein; SMART: PA14 domain protein; Fibronectin type III domain protein; SPTR: Putative uncharacterized protein; PFAM: PA14 domain; Fibronectin type III domain; fibronectin type III domain-containing protein complement(2867027..2871409) Isosphaera pallida ATCC 43644 10156100 YP_004179100.1 CDS Isop_1971 NC_014962.1 2871959 2872984 R COGs: COG0332 3-oxoacyl-(acyl-carrier-protein); InterPro IPR013751: IPR013747: IPR004655; KEGG: plm:Plim_2221 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase I; SPTR: 3-oxoacyl-(Acyl carrier protein) synthase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III complement(2871959..2872984) Isosphaera pallida ATCC 43644 10156101 YP_004179101.1 CDS Isop_1972 NC_014962.1 2873365 2877012 R COGs: COG0642 Signal transduction histidine kinase; InterProIPR013655: IPR013767: IPR003661: IPR003594: IPR 001789: IPR008207: IPR000014: IPR004358: IPR000896: IPR005467; KEGG: rba:RB159 sensory transduction histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold domain protein; Hpt domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; SPTR: Sensory transduction histidine kinase; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; Hpt domain; TIGRFAM: PAS domain S-box; multi-sensor hybrid histidine kinase complement(2873365..2877012) Isosphaera pallida ATCC 43644 10156102 YP_004179102.1 CDS Isop_1973 NC_014962.1 2877593 2878789 D InterPro IPR011467; KEGG: rba:RB12489 signal peptide; PFAM: protein of unknown function DUF1573; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1573); hypothetical protein 2877593..2878789 Isosphaera pallida ATCC 43644 10156103 YP_004179103.1 CDS Isop_1974 NC_014962.1 2878932 2880245 R COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: tkm:TK90_2517 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase complement(2878932..2880245) Isosphaera pallida ATCC 43644 10156104 YP_004179104.1 CDS Isop_1975 NC_014962.1 2880879 2881907 D InterPro IPR002035; KEGG: srm:SRM_02789 von Willebrand factor type A domain protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: von Willebrand factor type A domain protein; PFAM: von Willebrand factor type A domain; von Willebrand factor type A 2880879..2881907 Isosphaera pallida ATCC 43644 10156106 YP_004179105.1 CDS Isop_1976 NC_014962.1 2882278 2882856 D COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: psl:Psta_4009 ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; SPTR: Probable transcription regulator FurR family protein; PFAM: Ferric uptake regulator family; Fur family ferric uptake regulator 2882278..2882856 Isosphaera pallida ATCC 43644 10156107 YP_004179106.1 CDS Isop_1977 NC_014962.1 2882924 2883673 D COGs: COG1515 Deoxyinosine 3'endonuclease (endonuclease V); InterPro IPR007581; KEGG: dau:Daud_2187 deoxyribonuclease V; PFAM: Endonuclease V; PRIAM: Deoxyribonuclease V; SPTR: Deoxyribonuclease V; PFAM: Endonuclease V; Deoxyribonuclease V 2882924..2883673 Isosphaera pallida ATCC 43644 10156108 YP_004179107.1 CDS Isop_1978 NC_014962.1 2883828 2885321 R InterPro IPR005181; KEGG: rba:RB10048 sialic acid-specific 9-O-acetylesterase; PFAM: protein of unknown function DUF303 acetylesterase; PRIAM: Sialate O-acetylesterase; SPTR: Sialic acid-specific 9-O-acetylesterase; PFAM: Domain of unknown function (DUF303); sialate O-acetylesterase complement(2883828..2885321) Isosphaera pallida ATCC 43644 10156109 YP_004179108.1 CDS Isop_1979 NC_014962.1 2885698 2887062 D KEGG: dev:DhcVS_293 phage domain protein; SPTR: Phage domain protein; hypothetical protein 2885698..2887062 Isosphaera pallida ATCC 43644 10156110 YP_004179109.1 CDS Isop_1980 NC_014962.1 2887141 2887617 D KEGG: cyb:CYB_2329 OmpA family protein; SPTR: Putative DNA-binding protein; hypothetical protein 2887141..2887617 Isosphaera pallida ATCC 43644 10156111 YP_004179110.1 CDS Isop_1981 NC_014962.1 2887735 2888655 D KEGG: sus:Acid_4111 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: P22 coat protein - gene protein 5; hypothetical protein 2887735..2888655 Isosphaera pallida ATCC 43644 10156112 YP_004179111.1 CDS Isop_1982 NC_014962.1 2888815 2889237 D KEGG: pno:SNOG_05675 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2888815..2889237 Isosphaera pallida ATCC 43644 10156113 YP_004179112.1 CDS Isop_1983 NC_014962.1 2889269 2889688 D KEGG: htu:Htur_1455 pyrrolo-quinoline quinone; SPTR: Pyrrolo-quinoline quinone; hypothetical protein 2889269..2889688 Isosphaera pallida ATCC 43644 10156114 YP_004179113.1 CDS Isop_1984 NC_014962.1 2889685 2890512 D KEGG: plm:Plim_4245 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2889685..2890512 Isosphaera pallida ATCC 43644 10156115 YP_004179114.1 CDS Isop_1985 NC_014962.1 2890568 2891497 D KEGG: plm:Plim_2121 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2890568..2891497 Isosphaera pallida ATCC 43644 10156116 YP_004179115.1 CDS Isop_1986 NC_014962.1 2891539 2891715 D KEGG: mdo:100024436 hypothetical protein LOC100024436; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; hypothetical protein 2891539..2891715 Isosphaera pallida ATCC 43644 10156117 YP_004179116.1 CDS Isop_1987 NC_014962.1 2891732 2892523 D KEGG: aav:Aave_2261 hypothetical protein; SPTR: Beta-galactosidase family protein; hypothetical protein 2891732..2892523 Isosphaera pallida ATCC 43644 10156118 YP_004179117.1 CDS Isop_1988 NC_014962.1 2892514 2892756 D KEGG: bfo:BRAFLDRAFT_281325 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2892514..2892756 Isosphaera pallida ATCC 43644 10156119 YP_004179118.1 CDS Isop_1989 NC_014962.1 2892800 2893393 D KEGG: fal:FRAAL6684 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2892800..2893393 Isosphaera pallida ATCC 43644 10156120 YP_004179119.1 CDS Isop_1990 NC_014962.1 2893489 2894418 D KEGG: sro:Sros_5147 phosphoenolpyruvate synthase; SPTR: Phosphoenolpyruvate synthase; hypothetical protein 2893489..2894418 Isosphaera pallida ATCC 43644 10156121 YP_004179120.1 CDS Isop_1991 NC_014962.1 2894465 2897038 D KEGG: blo:BL1281 ribonuclease G; SPTR: Ribonuclease G; hypothetical protein 2894465..2897038 Isosphaera pallida ATCC 43644 10156122 YP_004179121.1 CDS Isop_1992 NC_014962.1 2897144 2897620 D KEGG: rsq:Rsph17025_0363 hypothetical protein; SPTR: Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase-like protein; hypothetical protein 2897144..2897620 Isosphaera pallida ATCC 43644 10156123 YP_004179122.1 CDS Isop_1993 NC_014962.1 2897819 2900038 D InterPro IPR000866: IPR017936; KEGG: rpf:Rpic12D_3102 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; alkyl hydroperoxide reductase 2897819..2900038 Isosphaera pallida ATCC 43644 10156124 YP_004179123.1 CDS Isop_1994 NC_014962.1 2900286 2902238 D COGs: COG0297 Glycogen synthase; InterPro IPR013534: IPR001296: IPR011835; KEGG: psl:Psta_3210 glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain-containing protein; glycosyl transferase group 1; SPTR: Glycogen synthase; TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; TIGRFAM: glycogen/starch synthases, ADP-glucose type; glycogen/starch synthase 2900286..2902238 Isosphaera pallida ATCC 43644 10156125 YP_004179124.1 CDS Isop_1995 NC_014962.1 2902416 2903318 D KEGG: ppp:PHYPADRAFT_72648 hypothetical protein; SPTR: Predicted protein; hypothetical protein 2902416..2903318 Isosphaera pallida ATCC 43644 10156126 YP_004179125.1 CDS Isop_1996 NC_014962.1 2903589 2906789 D InterProIPR003088: IPR004155: IPR013428: IPR013427: IPR 009056; KEGG: psl:Psta_0923 membrane-bound dehydrogenase domain protein; PFAM: cytochrome c class I; SMART: PBS lyase HEAT domain protein repeat-containing protein; SPTR: Putative uncharacterized protein; TIGRFAM: membrane-bound dehydrogenase domain protein; heme-binding protein; PFAM: Cytochrome c; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type; membrane-bound dehydrogenase domain-containing protein 2903589..2906789 Isosphaera pallida ATCC 43644 10156127 YP_004179126.1 CDS Isop_1997 NC_014962.1 2906915 2907529 R COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: ote:Oter_1985 ECF subfamily RNA polymerase sigma-24 factor; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; ECF subfamily RNA polymerase sigma-24 factor complement(2906915..2907529) Isosphaera pallida ATCC 43644 10156128 YP_004179127.1 CDS Isop_1998 NC_014962.1 2907820 2909979 R KEGG: act:ACLA_088300 WW domain protein; SPTR: WW domain protein; hypothetical protein complement(2907820..2909979) Isosphaera pallida ATCC 43644 10156129 YP_004179128.1 CDS Isop_1999 NC_014962.1 2910238 2911194 R COGs: COG2897 Rhodanese-related sulfurtransferase; InterPro IPR001763: IPR001307; KEGG: pfl:PFL_0553 fused rhodanese domain-containing protein/phosphatidylserine decarboxylase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: Rhodanese domain protein/phosphatidylserine decarboxylase; manually curated; PFAM: Rhodanese-like domain; rhodanese domain-containing protein complement(2910238..2911194) Isosphaera pallida ATCC 43644 10156130 YP_004179129.1 CDS Isop_2000 NC_014962.1 2911668 2912015 D COGs: COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing); InterPro IPR003751; KEGG: mgm:Mmc1_3093 carbon storage regulator, CsrA / carbon storage regulator, CsrA; PFAM: carbon storage regulator; SPTR: Carbon storage regulator homolog; PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA); carbon storage regulator CsrA 2911668..2912015 Isosphaera pallida ATCC 43644 10156131 YP_004179130.1 CDS Isop_2001 NC_014962.1 2912421 2914037 D COGs: COG2070 Dioxygenase related to 2-nitropropane dioxygenase; InterPro IPR004136: IPR014179; KEGG: plm:Plim_0463 PfaD family protein; PFAM: 2-nitropropane dioxygenase NPD; SPTR: PfaD family protein; TIGRFAM: PfaD family protein; PFAM: 2-nitropropane dioxygenase; TIGRFAM: PfaD family protein; PfaD family protein 2912421..2914037 Isosphaera pallida ATCC 43644 10156132 YP_004179131.1 CDS Isop_2002 NC_014962.1 2914205 2915485 D COGs: COG3321 Polyketide synthase modules and related protein; InterPro IPR014030: IPR018201; KEGG: gur:Gura_2012 erythronolide synthase; PFAM: Beta-ketoacyl synthase; SPTR: Erythronolide synthase; PFAM: Beta-ketoacyl synthase, N-terminal domain; beta-ketoacyl synthase 2914205..2915485 Isosphaera pallida ATCC 43644 10156133 YP_004179132.1 CDS Isop_2003 NC_014962.1 2915451 2922029 D COGs: COG3321 Polyketide synthase modules and related protein; InterProIPR014031: IPR014043: IPR006163: IPR013968: IPR 009081; KEGG: glo:Glov_2267 polyketide-type polyunsaturated fatty acid synthase PfaA; PFAM: KR domain protein; Beta-ketoacyl synthase; Acyl transferase; phosphopantetheine-binding; SPTR: Polyketide-type polyunsaturated fatty acid synthase PfaA; PFAM: Acyl transferase domain; Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: acyl carrier protein; KR domain-containing protein 2915451..2922029 Isosphaera pallida ATCC 43644 10156134 YP_004179133.1 CDS Isop_2004 NC_014962.1 2922026 2929147 D COGs: COG3321 Polyketide synthase modules and related protein; InterPro IPR014030: IPR014031: IPR013114; KEGG: glo:Glov_2268 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; SPTR: Beta-ketoacyl synthase; PFAM: FabA-like domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: PfaB family protein; beta-ketoacyl synthase 2922026..2929147 Isosphaera pallida ATCC 43644 10156135 YP_004179134.1 CDS Isop_2005 NC_014962.1 2929241 2930296 D COGs: COG0332 3-oxoacyl-(acyl-carrier-protein); InterPro IPR013747; KEGG: plm:Plim_3323 3-oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain protein; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; SPTR: 3-Oxoacyl-(Acyl-carrier-protein (ACP)) synthase III domain protein; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; Thiolase, N-terminal domain; 3-oxoacyl-ACP synthase 2929241..2930296 Isosphaera pallida ATCC 43644 10156136 YP_004179135.1 CDS Isop_2006 NC_014962.1 2930296 2931261 D COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073: IPR000639; KEGG: glo:Glov_2270 alpha/beta hydrolase fold; PFAM: alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase fold; PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 2930296..2931261 Isosphaera pallida ATCC 43644 10156137 YP_004179136.1 CDS Isop_2007 NC_014962.1 2931661 2933343 D COGs: COG3379 conserved hypothetical protein; InterPro IPR002591; KEGG: hor:Hore_17270 type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; SPTR: Type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase; type I phosphodiesterase/nucleotide pyrophosphatase 2931661..2933343 Isosphaera pallida ATCC 43644 10156138 YP_004179137.1 CDS Isop_2008 NC_014962.1 2933445 2934845 D COGs: COG2271 Sugar phosphate permease; InterPro IPR011701; KEGG: rms:RMA_0089 sugar phosphate permease; PFAM: major facilitator superfamily MFS_1; SPTR: Glycerol-3-phosphate transporter; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein 2933445..2934845 Isosphaera pallida ATCC 43644 10156139 YP_004179138.1 CDS Isop_2009 NC_014962.1 2934916 2936424 R COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: rba:RB4638 arylsulphatase A; PFAM: sulfatase; SPTR: Arylsulphatase A; PFAM: Sulfatase; sulfatase complement(2934916..2936424) Isosphaera pallida ATCC 43644 10156140 YP_004179139.1 CDS Isop_2010 NC_014962.1 2936913 2937614 D KEGG: phu:Phum_PHUM263440 spliceosome associated protein, putative; SPTR: Putative uncharacterized protein; hypothetical protein 2936913..2937614 Isosphaera pallida ATCC 43644 10156141 YP_004179140.1 CDS Isop_2011 NC_014962.1 2937768 2939828 D COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR000212: IPR014016: IPR014017; KEGG: ank:AnaeK_2052 UvrD/REP helicase; PFAM: UvrD/REP helicase; SPTR: UvrD/REP helicase; PFAM: UvrD/REP helicase; UvrD/REP helicase 2937768..2939828 Isosphaera pallida ATCC 43644 10156142 YP_004179141.1 CDS Isop_2012 NC_014962.1 2939848 2940729 R KEGG: rba:RB12718 putative tRNA adenylyltransferase; SPTR: Putative uncharacterized protein; PFAM: HD domain; hypothetical protein complement(2939848..2940729) Isosphaera pallida ATCC 43644 10156143 YP_004179142.1 CDS Isop_2013 NC_014962.1 2940875 2942734 R COGs: COG3386 Gluconolactonase; InterPro IPR000801: IPR013658: IPR005511; KEGG: plm:Plim_2162 SMP-30/gluconolaconase/LRE domain protein; PFAM: SMP-30/Gluconolaconase/LRE-like region-containing protein; esterase; SPTR: SMP-30/Gluconolaconase/LRE domain protein; PFAM: SMP-30/Gluconolaconase/LRE-like region; Putative esterase; gluconolactonase complement(2940875..2942734) Isosphaera pallida ATCC 43644 10156144 YP_004179143.1 CDS Isop_2014 NC_014962.1 2943088 2943336 D InterPro IPR007341; KEGG: cli:Clim_0730 transglycosylase-associated protein; PFAM: Transglycosylase-associated protein; SPTR: Transglycosylase-associated protein; PFAM: Transglycosylase associated protein; transglycosylase-associated protein 2943088..2943336 Isosphaera pallida ATCC 43644 10156145 YP_004179144.1 CDS Isop_2015 NC_014962.1 2943779 2946373 D COGs: COG0515 Serine/threonine protein kinase; InterProIPR017442: IPR020635: IPR002290: IPR017441: IPR 008271: IPR000719; KEGG: gob:Gobs_1752 serine/threonine protein kinase with PASTA sensor(s); PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase with PASTA sensor(S); PFAM: Protein kinase domain; serine/threonine protein kinase 2943779..2946373 Isosphaera pallida ATCC 43644 10156146 YP_004179145.1 CDS Isop_2016 NC_014962.1 2946513 2947214 R COGs: COG0819 Putative transcription activator; InterPro IPR004305; KEGG: mjl:Mjls_0346 TenA family transcription regulator; PFAM: TENA/THI-4 domain-containing protein; PRIAM: Thiaminase; SPTR: Transcriptional activator, TenA family; PFAM: TENA/THI-4/PQQC family; 4-amino-5-aminomethyl-2-methylpyrimidine deaminase complement(2946513..2947214) Isosphaera pallida ATCC 43644 10156147 YP_004179146.1 CDS Isop_2017 NC_014962.1 2947293 2948546 R InterPro IPR002035; KEGG: psl:Psta_0969 hypothetical protein; SMART: von Willebrand factor type A; SPTR: Putative uncharacterized protein; PFAM: Predicted metallopeptidase (DUF2201); von Willebrand factor type A complement(2947293..2948546) Isosphaera pallida ATCC 43644 10156148 YP_004179147.1 CDS Isop_2018 NC_014962.1 2948617 2948772 R KEGG: cpc:Cpar_0963 hypothetical protein; SPTR: Conserved hypothetical membrane protein; hypothetical protein complement(2948617..2948772) Isosphaera pallida ATCC 43644 10156149 YP_004179148.1 CDS Isop_2019 NC_014962.1 2949166 2949621 D InterPro IPR004360; KEGG: cvi:CV_2020 hypothetical protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Putative uncharacterized protein; PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; glyoxalase/bleomycin resistance protein/dioxygenase 2949166..2949621 Isosphaera pallida ATCC 43644 10156150 YP_004179149.1 CDS Isop_2020 NC_014962.1 2949680 2949793 R hypothetical protein complement(2949680..2949793) Isosphaera pallida ATCC 43644 10156151 YP_004179150.1 CDS Isop_2021 NC_014962.1 2950390 2952069 R COGs: COG3211 phosphatase; InterPro IPR008557: IPR006311: IPR017909; KEGG: hau:Haur_4431 hypothetical protein; PFAM: protein of unknown function DUF839; SPTR: Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF839); hypothetical protein complement(2950390..2952069) Isosphaera pallida ATCC 43644 10156152 YP_004179151.1 CDS Isop_2022 NC_014962.1 2952671 2953309 D KEGG: rpt:Rpal_3870 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2952671..2953309 Isosphaera pallida ATCC 43644 10156153 YP_004179152.1 CDS Isop_2023 NC_014962.1 2953354 2954352 D COGs: COG0113 Delta-aminolevulinic acid dehydratase; InterPro IPR001731; KEGG: msl:Msil_0420 delta-aminolevulinic acid dehydratase; PFAM: delta-aminolevulinic acid dehydratase; PRIAM: Porphobilinogen synthase; SPTR: Delta-aminolevulinic acid dehydratase; PFAM: Delta-aminolevulinic acid dehydratase; porphobilinogen synthase 2953354..2954352 Isosphaera pallida ATCC 43644 10156154 YP_004179153.1 CDS Isop_2024 NC_014962.1 2954389 2955660 R COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: mxa:MXAN_1029 glycosyl transferase, group 1 family protein; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase complement(2954389..2955660) Isosphaera pallida ATCC 43644 10156155 YP_004179154.1 CDS Isop_2025 NC_014962.1 2955657 2957720 R COGs: COG0642 Signal transduction histidine kinase; InterProIPR003661: IPR003594: IPR001789: IPR004358: IPR 005467; KEGG: rba:RB8873 sensory transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SPTR: Sensory transduction histidine kinase; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor hybrid histidine kinase complement(2955657..2957720) Isosphaera pallida ATCC 43644 10156156 YP_004179155.1 CDS Isop_2026 NC_014962.1 2957787 2958656 R InterPro IPR000866: IPR017936; KEGG: fjo:Fjoh_2938 hypothetical protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Putative uncharacterized protein; PFAM: Redoxin; alkyl hydroperoxide reductase complement(2957787..2958656) Isosphaera pallida ATCC 43644 10156157 YP_004179156.1 CDS Isop_2027 NC_014962.1 2958792 2959718 R COGs: COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; InterPro IPR013749: IPR004399; KEGG: cja:CJA_2910 phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; PRIAM: Phosphomethylpyrimidine kinase; SPTR: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; phosphomethylpyrimidine kinase complement(2958792..2959718) Isosphaera pallida ATCC 43644 10156158 YP_004179157.1 CDS Isop_2028 NC_014962.1 2959916 2960986 R InterPro IPR001943; KEGG: psl:Psta_3649 hypothetical protein; PFAM: UvrB/UvrC protein; SPTR: Putative uncharacterized protein; PFAM: UvrB/uvrC motif; UvrB/UvrC protein complement(2959916..2960986) Isosphaera pallida ATCC 43644 10156159 YP_004179158.1 CDS Isop_2029 NC_014962.1 2961960 2962580 D InterPro IPR008538; KEGG: rrs:RoseRS_2740 hypothetical protein; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF820); hypothetical protein 2961960..2962580 Isosphaera pallida ATCC 43644 10156160 YP_004179159.1 CDS Isop_2030 NC_014962.1 2962603 2962848 R KEGG: osa:4341597 hypothetical protein; SPTR: Os06g0634600 protein; hypothetical protein complement(2962603..2962848) Isosphaera pallida ATCC 43644 10156161 YP_004179160.1 CDS Isop_2031 NC_014962.1 2962845 2964332 R KEGG: aca:ACP_1356 BNR/Asp-box repeat protein; SPTR: BNR/Asp-box repeat protein; PFAM: BNR/Asp-box repeat; hypothetical protein complement(2962845..2964332) Isosphaera pallida ATCC 43644 10156162 YP_004179161.1 CDS Isop_2032 NC_014962.1 2964586 2965398 D COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198: IPR002347; KEGG: psl:Psta_2635 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 2964586..2965398 Isosphaera pallida ATCC 43644 10156163 YP_004179162.1 CDS Isop_2033 NC_014962.1 2965470 2966006 R KEGG: ppp:PHYPADRAFT_224311 hypothetical protein; SPTR: Predicted protein; hypothetical protein complement(2965470..2966006) Isosphaera pallida ATCC 43644 10156164 YP_004179163.1 CDS Isop_2034 NC_014962.1 2966273 2967061 D KEGG: cyh:Cyan8802_2208 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2966273..2967061 Isosphaera pallida ATCC 43644 10156165 YP_004179164.1 CDS Isop_2035 NC_014962.1 2966961 2967353 R COGs: COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase; InterPro IPR017941; KEGG: psl:Psta_2904 Rieske (2Fe-2S) domain protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: Rieske (2Fe-2S) domain protein; PFAM: Rieske [2Fe-2S] domain; Rieske (2Fe-2S) domain-containing protein complement(2966961..2967353) Isosphaera pallida ATCC 43644 10156166 YP_004179165.1 CDS Isop_2036 NC_014962.1 2967762 2970707 D InterPro IPR011444; KEGG: rba:RB544 hypothetical protein; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Planctomycete cytochrome C; Protein of unknown function (DUF1549); Protein of unknown function (DUF1553); hypothetical protein 2967762..2970707 Isosphaera pallida ATCC 43644 10156167 YP_004179166.1 CDS Isop_2037 NC_014962.1 2970775 2972304 D InterPro IPR010869: IPR006311: IPR017909; KEGG: rba:RB546 hypothetical protein; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501); hypothetical protein 2970775..2972304 Isosphaera pallida ATCC 43644 10156168 YP_004179167.1 CDS Isop_2038 NC_014962.1 2972628 2973056 R KEGG: plm:Plim_2790 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2972628..2973056) Isosphaera pallida ATCC 43644 10156169 YP_004179168.1 CDS Isop_2039 NC_014962.1 2973658 2974734 R KEGG: kse:Ksed_00180 protein kinase family protein with PASTA domain; SPTR: Protein kinase family protein with PASTA domain; hypothetical protein complement(2973658..2974734) Isosphaera pallida ATCC 43644 10156170 YP_004179169.1 CDS Isop_2040 NC_014962.1 2974922 2975833 R COGs: COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; InterPro IPR006218: IPR006269; KEGG: psl:Psta_3993 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA; SPTR: 2-dehydro-3-deoxyphosphooctonate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I family; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; 2-dehydro-3-deoxyphosphooctonate aldolase complement(2974922..2975833) Isosphaera pallida ATCC 43644 10156171 YP_004179170.1 CDS Isop_2041 NC_014962.1 2975913 2977079 R COGs: COG1597 Sphingosine kinase; InterPro IPR001206; KEGG: psl:Psta_3992 diacylglycerol kinase catalytic region; PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; SPTR: Putative uncharacterized protein; PFAM: Diacylglycerol kinase catalytic domain; diacylglycerol kinase catalytic subunit complement(2975913..2977079) Isosphaera pallida ATCC 43644 10156172 YP_004179171.1 CDS Isop_2042 NC_014962.1 2977359 2977916 R KEGG: tbi:Tbis_1120 RNA binding metal dependent phosphohydrolase; SPTR: RNA binding metal dependent phosphohydrolase; hypothetical protein complement(2977359..2977916) Isosphaera pallida ATCC 43644 10156173 YP_004179172.1 CDS Isop_2043 NC_014962.1 2979025 2979888 D InterPro IPR012902; KEGG: rba:RB6458 signal peptide; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 2979025..2979888 Isosphaera pallida ATCC 43644 10156174 YP_004179173.1 CDS Isop_2044 NC_014962.1 2980074 2980895 D InterPro IPR013424; KEGG: rba:RB4575 signal peptide; SPTR: Putative uncharacterized protein; hypothetical protein 2980074..2980895 Isosphaera pallida ATCC 43644 10156175 YP_004179174.1 CDS Isop_2045 NC_014962.1 2981017 2982057 D KEGG: mac:MA4289 cell surface protein; SPTR: Cell surface protein; cell surface protein 2981017..2982057 Isosphaera pallida ATCC 43644 10156176 YP_004179175.1 CDS Isop_2046 NC_014962.1 2982150 2982503 R KEGG: jde:Jden_1212 anthranilate synthase component I; SPTR: Anthranilate synthase component I; hypothetical protein complement(2982150..2982503) Isosphaera pallida ATCC 43644 10156177 YP_004179176.1 CDS Isop_2047 NC_014962.1 2983129 2984673 D InterPro IPR011521; KEGG: psl:Psta_1964 YTV domain protein; PFAM: YTV repeat-containing protein; SPTR: YTV domain protein; PFAM: YTV; YTV repeat-containing protein 2983129..2984673 Isosphaera pallida ATCC 43644 10156178 YP_004179177.1 CDS Isop_2048 NC_014962.1 2984803 2986215 D KEGG: osa:4328854 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2984803..2986215 Isosphaera pallida ATCC 43644 10156179 YP_004179178.1 CDS Isop_2049 NC_014962.1 2986362 2987789 D COGs: COG0515 Serine/threonine protein kinase; InterProIPR000253: IPR017442: IPR020635: IPR002290: IPR 017441: IPR008271: IPR000719; KEGG: sro:Sros_3456 serine/threonine protein kinase-like protein; PFAM: Serine/threonine-protein kinase-like domain; Forkhead-associated protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; Forkhead-associated protein; SPTR: Serine/threonine protein kinase-like protein; PFAM: Protein kinase domain; FHA domain; FHA domain-containing serine/threonine protein kinase 2986362..2987789 Isosphaera pallida ATCC 43644 10156180 YP_004179179.1 CDS Isop_2050 NC_014962.1 2987926 2989575 R COGs: COG0366 Glycosidase; InterPro IPR006047: IPR006589: IPR012810; KEGG: mxa:MXAN_3684 trehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Trehalose synthase; TIGRFAM: trehalose synthase; PFAM: Alpha amylase, catalytic domain; TIGRFAM: trehalose synthase; trehalose synthase complement(2987926..2989575) Isosphaera pallida ATCC 43644 10156181 YP_004179180.1 CDS Isop_2051 NC_014962.1 2990060 2991073 D COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterPro IPR001623: IPR002939: IPR003095: IPR018253; KEGG: psl:Psta_4209 chaperone DnaJ domain protein; PFAM: heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: Chaperone DnaJ domain protein; PFAM: DnaJ C terminal region; DnaJ domain; heat shock protein DnaJ domain-containing protein 2990060..2991073 Isosphaera pallida ATCC 43644 10156182 YP_004179181.1 CDS Isop_2052 NC_014962.1 2991166 2991558 D KEGG: gla:GL50803_113836 High cysteine membrane protein EGF-like; SPTR: High cysteine membrane protein EGF-like; hypothetical protein 2991166..2991558 Isosphaera pallida ATCC 43644 10156183 YP_004179182.1 CDS Isop_2053 NC_014962.1 2991602 2992099 D COGs: COG0594 RNase P protein component; InterPro IPR000100; KEGG: psl:Psta_4212 ribonuclease P protein component; PFAM: ribonuclease P protein; SPTR: Ribonuclease P protein component; TIGRFAM: ribonuclease P protein component; PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial; ribonuclease P protein component 2991602..2992099 Isosphaera pallida ATCC 43644 10156184 YP_004179183.1 CDS Isop_2054 NC_014962.1 2992108 2992386 D COGs: COG0759 conserved hypothetical protein; InterPro IPR002696; KEGG: aeh:Mlg_1511 hypothetical protein; PFAM: protein of unknown function DUF37; SPTR: UPF0161 protein Mlg_1511; PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein YidD; hypothetical protein 2992108..2992386 Isosphaera pallida ATCC 43644 10156185 YP_004179184.1 CDS Isop_2055 NC_014962.1 2992477 2993826 R KEGG: scb:SCAB_10901 putative membrane-bound oxidoreductase; SPTR: Tetratricopeptide TPR_2 repeat protein; hypothetical protein complement(2992477..2993826) Isosphaera pallida ATCC 43644 10156186 YP_004179185.1 CDS Isop_2056 NC_014962.1 2993831 2994799 R KEGG: plm:Plim_2899 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2993831..2994799) Isosphaera pallida ATCC 43644 10156187 YP_004179186.1 CDS Isop_2057 NC_014962.1 2994882 2995301 R KEGG: rba:RB7689 signal peptide; SPTR: Putative uncharacterized protein; hypothetical protein complement(2994882..2995301) Isosphaera pallida ATCC 43644 10156188 YP_004179187.1 CDS Isop_2058 NC_014962.1 2995510 2996694 R InterPro IPR012902; KEGG: plm:Plim_2901 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein complement(2995510..2996694) Isosphaera pallida ATCC 43644 10156189 YP_004179188.1 CDS Isop_2059 NC_014962.1 2997038 2998759 R COGs: COG1164 Oligoendopeptidase F; InterPro IPR001567: IPR011976; KEGG: min:Minf_1983 oligoendopeptidase F; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; SPTR: Oligoendopeptidase, M3 family; TIGRFAM: oligoendopeptidase, M3 family; PFAM: Peptidase family M3; TIGRFAM: oligoendopeptidase, M3 family; oligoendopeptidase complement(2997038..2998759) Isosphaera pallida ATCC 43644 10156190 YP_004179189.1 CDS Isop_2060 NC_014962.1 2999454 3000740 R COGs: COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetase; InterPro IPR013120: IPR010080; KEGG: mxa:MXAN_4525 non-ribosomal peptide synthase MxaA; PFAM: Male sterility domain; SPTR: MxaA; TIGRFAM: thioester reductase domain protein; PFAM: Male sterility protein; TIGRFAM: thioester reductase domain; thioester reductase domain-containing protein complement(2999454..3000740) Isosphaera pallida ATCC 43644 10156192 YP_004179190.1 CDS Isop_2061 NC_014962.1 3000848 3001876 R COGs: COG0012 GTPase probable translation factor; InterPro IPR013029: IPR004396: IPR006073; KEGG: mta:Moth_2477 GTP-dependent nucleic acid-binding protein EngD; PFAM: protein of unknown function DUF933; SPTR: Putative uncharacterized protein; TIGRFAM: GTP-binding protein YchF; PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF; GTP-binding protein YchF complement(3000848..3001876) Isosphaera pallida ATCC 43644 10156193 YP_004179191.1 CDS Isop_2062 NC_014962.1 3001968 3003686 R COGs: COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase; InterPro IPR000583: IPR000836: IPR005854: IPR017932; KEGG: rba:RB5050 amidophosphoribosyltransferase [precursor]; PFAM: phosphoribosyltransferase; glutamine amidotransferase class-II; SPTR: Amidophosphoribosyltransferase [precursor]; PFAM: Phosphoribosyl transferase domain; Glutamine amidotransferases class-II; TIGRFAM: amidophosphoribosyltransferase; amidophosphoribosyltransferase complement(3001968..3003686) Isosphaera pallida ATCC 43644 10156194 YP_004179192.1 CDS Isop_2063 NC_014962.1 3004031 3005269 D COGs: COG0263 Glutamate 5-kinase; InterProIPR001048: IPR002478: IPR011529: IPR001057: IPR 005715: IPR019797; KEGG: plm:Plim_1538 glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; SMART: PUA domain containing protein; SPTR: Glutamate 5-kinase; TIGRFAM: glutamate 5-kinase; PFAM: PUA domain; Amino acid kinase family; TIGRFAM: glutamate 5-kinase; glutamate 5-kinase 3004031..3005269 Isosphaera pallida ATCC 43644 10156195 YP_004179193.1 CDS Isop_2064 NC_014962.1 3005473 3006264 D InterPro IPR003825; KEGG: det:DET0192 CvpA family protein; PFAM: Colicin V production protein; SPTR: CvpA family protein; PFAM: Colicin V production protein; colicin V production protein 3005473..3006264 Isosphaera pallida ATCC 43644 10156196 YP_004179194.1 CDS Isop_2065 NC_014962.1 3006355 3008631 D KEGG: oan:Oant_2034 phosphatidate cytidylyltransferase; SPTR: Putative uncharacterized protein; hypothetical protein 3006355..3008631 Isosphaera pallida ATCC 43644 10156197 YP_004179195.1 CDS Isop_2066 NC_014962.1 3008486 3010114 R COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: srm:SRM_01110 nucleoside-diphosphate-sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Nucleoside-diphosphate-sugar epimerase; PFAM: NAD dependent epimerase/dehydratase family; NAD-dependent epimerase/dehydratase complement(3008486..3010114) Isosphaera pallida ATCC 43644 10156198 YP_004179196.1 CDS Isop_2067 NC_014962.1 3010310 3011155 R COGs: COG0024 Methionine aminopeptidase; InterPro IPR000994: IPR001714: IPR002467; KEGG: dsa:Desal_2239 methionine aminopeptidase, type I; PFAM: peptidase M24; PRIAM: Methionyl aminopeptidase; SPTR: Methionine aminopeptidase, type I; TIGRFAM: methionine aminopeptidase, type I; PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I; methionine aminopeptidase complement(3010310..3011155) Isosphaera pallida ATCC 43644 10156199 YP_004179197.1 CDS Isop_2068 NC_014962.1 3011312 3012418 R COGs: COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR006218: IPR006219; KEGG: plm:Plim_0134 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; PRIAM: 3-deoxy-7-phosphoheptulonate synthase; SPTR: Phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase complement(3011312..3012418) Isosphaera pallida ATCC 43644 10156200 YP_004179198.1 CDS Isop_2069 NC_014962.1 3012654 3013646 R COGs: COG2897 Rhodanese-related sulfurtransferase; InterPro IPR001763: IPR001307; KEGG: rxy:Rxyl_2802 thiosulfate sulfurtransferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: Thiosulfate sulfurtransferase; PFAM: Rhodanese-like domain; rhodanese domain-containing protein complement(3012654..3013646) Isosphaera pallida ATCC 43644 10156201 YP_004179199.1 CDS Isop_2070 NC_014962.1 3013942 3014925 D COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR013154: IPR013149; KEGG: plm:Plim_0729 alcohol dehydrogenase zinc-binding domain protein; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; SPTR: Alcohol dehydrogenase GroES domain protein; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; alcohol dehydrogenase GroES domain-containing protein 3013942..3014925 Isosphaera pallida ATCC 43644 10156202 YP_004179200.1 CDS Isop_2071 NC_014962.1 3015148 3016131 D COGs: COG0863 DNA modification methylase; InterPro IPR002941: IPR001091: IPR002052; KEGG: chl:Chy400_0713 DNA methylase N-4/N-6 domain protein; PFAM: DNA methylase N-4/N-6 domain protein; SPTR: DNA methylase; PFAM: DNA methylase; DNA methylase N-4/N-6 domain-containing protein 3015148..3016131 Isosphaera pallida ATCC 43644 10156203 YP_004179201.1 CDS Isop_2072 NC_014962.1 3016198 3016875 R COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: plm:Plim_4088 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: Methyltransferase domain; type 11 methyltransferase complement(3016198..3016875) Isosphaera pallida ATCC 43644 10156204 YP_004179202.1 CDS Isop_2073 NC_014962.1 3017172 3018221 R InterPro IPR012902; KEGG: psl:Psta_3084 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein complement(3017172..3018221) Isosphaera pallida ATCC 43644 10156205 YP_004179203.1 CDS Isop_2074 NC_014962.1 3018441 3019604 R COGs: COG2232 ATP-dependent carboligase related to biotin carboxylase; InterPro IPR003806: IPR011761; KEGG: met:M446_5779 hypothetical protein; PFAM: protein of unknown function DUF201; SPTR: Putative uncharacterized protein; PFAM: ATP-grasp domain; hypothetical protein complement(3018441..3019604) Isosphaera pallida ATCC 43644 10156206 YP_004179204.1 CDS Isop_2075 NC_014962.1 3019879 3021219 R COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: aba:Acid345_2211 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, family 2; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase complement(3019879..3021219) Isosphaera pallida ATCC 43644 10156207 YP_004179205.1 CDS Isop_2076 NC_014962.1 3021283 3022101 R KEGG: fra:Francci3_3136 serine/threonine protein kinase; SPTR: Serine/threonine protein kinase; hypothetical protein complement(3021283..3022101) Isosphaera pallida ATCC 43644 10156208 YP_004179206.1 CDS Isop_2077 NC_014962.1 3022143 3023576 R COGs: COG1641 conserved hypothetical protein; InterPro IPR002822; KEGG: plm:Plim_2400 protein of unknown function DUF111; PFAM: protein of unknown function DUF111; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF111; TIGRFAM: conserved hypothetical protein TIGR00299; hypothetical protein complement(3022143..3023576) Isosphaera pallida ATCC 43644 10156209 YP_004179207.1 CDS Isop_2078 NC_014962.1 3024692 3025024 D COGs: COG0051 Ribosomal protein S10; InterPro IPR001848: IPR005731; KEGG: plm:Plim_0476 ribosomal protein S10; PFAM: ribosomal protein S10; SPTR: 30S ribosomal protein S10; TIGRFAM: ribosomal protein S10; PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle; 30S ribosomal protein S10P 3024692..3025024 Isosphaera pallida ATCC 43644 10156210 YP_004179208.1 CDS Isop_2079 NC_014962.1 3025468 3026106 D COGs: COG0087 Ribosomal protein L3; InterPro IPR000597: IPR019927: IPR019926; KEGG: rba:RB7833 50S ribosomal protein L3; PFAM: ribosomal protein L3; SPTR: 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial; 50S ribosomal protein L3P 3025468..3026106 Isosphaera pallida ATCC 43644 10156211 YP_004179209.1 CDS Isop_2080 NC_014962.1 3026267 3027037 D COGs: COG0088 Ribosomal protein L4; InterPro IPR002136; KEGG: psl:Psta_2601 ribosomal protein L4/L1e; PFAM: ribosomal protein L4/L1e; SPTR: 50S ribosomal protein L4; PFAM: Ribosomal protein L4/L1 family; 50S ribosomal protein L4 3026267..3027037 Isosphaera pallida ATCC 43644 10156212 YP_004179210.1 CDS Isop_2081 NC_014962.1 3027045 3027374 D COGs: COG0089 Ribosomal protein L23; InterPro IPR013025; KEGG: plm:Plim_0479 ribosomal protein L25/L23; PFAM: Ribosomal protein L25/L23; SPTR: 50S ribosomal protein L23; PFAM: Ribosomal protein L23; 50S ribosomal protein L23 3027045..3027374 Isosphaera pallida ATCC 43644 10156213 YP_004179211.1 CDS Isop_2082 NC_014962.1 3027567 3028427 D COGs: COG0090 Ribosomal protein L2; InterPro IPR002171: IPR005880; KEGG: plm:Plim_0480 ribosomal protein L2; PFAM: ribosomal protein L2; SPTR: 50S ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar; 50S ribosomal protein L2 3027567..3028427 Isosphaera pallida ATCC 43644 10156214 YP_004179212.1 CDS Isop_2083 NC_014962.1 3028514 3028789 D COGs: COG0185 Ribosomal protein S19; InterPro IPR002222: IPR005732: IPR020934; KEGG: tye:THEYE_A1442 ribosomal protein S19; PFAM: ribosomal protein S19/S15; SPTR: 30S ribosomal protein S19; TIGRFAM: ribosomal protein S19; PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle; 30S ribosomal protein S19 3028514..3028789 Isosphaera pallida ATCC 43644 10156215 YP_004179213.1 CDS Isop_2084 NC_014962.1 3028896 3029348 D COGs: COG0091 Ribosomal protein L22; InterPro IPR001063: IPR005727; KEGG: psl:Psta_2605 ribosomal protein L22; PFAM: ribosomal protein L22/L17; SPTR: 50S ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type; 50S ribosomal protein L22 3028896..3029348 Isosphaera pallida ATCC 43644 10156216 YP_004179214.1 CDS Isop_2085 NC_014962.1 3029564 3030268 D COGs: COG0092 Ribosomal protein S3; InterProIPR008282: IPR004044: IPR001351: IPR004087: IPR 005704: IPR018280; KEGG: psl:Psta_2606 ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; Ribosomal protein S3 domain; KH type 2 domain protein; SMART: KH domain protein; SPTR: 30S ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type; 30S ribosomal protein S3 3029564..3030268 Isosphaera pallida ATCC 43644 10156217 YP_004179215.1 CDS Isop_2086 NC_014962.1 3030207 3030626 D COGs: COG0197 Ribosomal protein L16/L10E; InterPro IPR016180: IPR000114: IPR020798; KEGG: rba:RB7841 50S ribosomal protein L16; PFAM: Ribosomal protein L10e/L16; SPTR: 50S ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle; 50S ribosomal protein L16 3030207..3030626 Isosphaera pallida ATCC 43644 10156218 YP_004179216.1 CDS Isop_2087 NC_014962.1 3030867 3031088 D InterPro IPR001854; KEGG: psl:Psta_2608 ribosomal protein L29; PFAM: ribosomal protein L29; SPTR: Probable 50S ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29; 50S ribosomal protein L29 3030867..3031088 Isosphaera pallida ATCC 43644 10156219 YP_004179217.1 CDS Isop_2088 NC_014962.1 3031214 3031540 D COGs: COG0186 Ribosomal protein S17; InterPro IPR000266: IPR019984: IPR019979; KEGG: plm:Plim_0486 ribosomal protein S17; PFAM: ribosomal protein S17; SPTR: 30S ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; 30S ribosomal protein S17 3031214..3031540 Isosphaera pallida ATCC 43644 10156220 YP_004179218.1 CDS Isop_2089 NC_014962.1 3031803 3032189 D COGs: COG0093 Ribosomal protein L14; InterPro IPR000218: IPR005745; KEGG: shi:Shel_23370 LSU ribosomal protein L14P; PFAM: ribosomal protein L14b/L23e; SPTR: 50S ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle; 50S ribosomal protein L14 3031803..3032189 Isosphaera pallida ATCC 43644 10156221 YP_004179219.1 CDS Isop_2090 NC_014962.1 3032324 3032698 D COGs: COG0198 Ribosomal protein L24; InterPro IPR005824: IPR003256: IPR005825; KEGG: rba:RB7851 50S ribosomal protein L24; PFAM: KOW domain protein; SMART: KOW domain protein; SPTR: 50S ribosomal protein L24; TIGRFAM: ribosomal protein L24; PFAM: KOW motif; TIGRFAM: ribosomal protein L24, bacterial/organelle; 50S ribosomal protein L24 3032324..3032698 Isosphaera pallida ATCC 43644 10156222 YP_004179220.1 CDS Isop_2091 NC_014962.1 3032923 3033564 D COGs: COG0094 Ribosomal protein L5; InterPro IPR002132: IPR020929; KEGG: aba:Acid345_1238 50S ribosomal protein L5; SPTR: 50S ribosomal protein L5; PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5; 50S ribosomal protein L5 3032923..3033564 Isosphaera pallida ATCC 43644 10156223 YP_004179221.1 CDS Isop_2092 NC_014962.1 3033741 3033926 D COGs: COG0199 Ribosomal protein S14; InterPro IPR001209: IPR018271; KEGG: emi:Emin_1405 ribosomal protein S14; PFAM: ribosomal protein S14; SPTR: 30S ribosomal protein S14 type Z; manually curated; PFAM: Ribosomal protein S14p/S29e; 30S ribosomal protein S14 3033741..3033926 Isosphaera pallida ATCC 43644 10156224 YP_004179222.1 CDS Isop_2093 NC_014962.1 3034113 3034508 D COGs: COG0096 Ribosomal protein S8; InterPro IPR000630; KEGG: psl:Psta_2614 ribosomal protein S8; PFAM: ribosomal protein S8; SPTR: 30S ribosomal protein S8; PFAM: Ribosomal protein S8; 30S ribosomal protein S8 3034113..3034508 Isosphaera pallida ATCC 43644 10156225 YP_004179223.1 CDS Isop_2094 NC_014962.1 3034616 3035164 D COGs: COG0097 Ribosomal protein L6P/L9E; InterPro IPR020040: IPR000702: IPR019906: IPR002358; KEGG: rba:RB7856 50S ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain; SPTR: 50S ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type; 50S ribosomal protein L6 3034616..3035164 Isosphaera pallida ATCC 43644 10156226 YP_004179224.1 CDS Isop_2095 NC_014962.1 3035449 3035805 D COGs: COG0256 Ribosomal protein L18; InterPro IPR005484: IPR004389; KEGG: sth:STH3059 50S ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; SPTR: 50S ribosomal protein L18; TIGRFAM: ribosomal protein L18; PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type; 50S ribosomal protein L18 3035449..3035805 Isosphaera pallida ATCC 43644 10156227 YP_004179225.1 CDS Isop_2096 NC_014962.1 3035802 3035930 R hypothetical protein complement(3035802..3035930) Isosphaera pallida ATCC 43644 10156228 YP_004179226.1 CDS Isop_2097 NC_014962.1 3035961 3036464 D COGs: COG0098 Ribosomal protein S5; InterPro IPR013810: IPR005324: IPR005712: IPR018192; KEGG: rba:RB7859 30S ribosomal protein S5; PFAM: ribosomal protein S5 domain protein; Ribosomal protein S5; SPTR: 30S ribosomal protein S5; TIGRFAM: ribosomal protein S5; PFAM: Ribosomal protein S5, C-terminal domain; Ribosomal protein S5, N-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type; 30S ribosomal protein S5 3035961..3036464 Isosphaera pallida ATCC 43644 10156229 YP_004179227.1 CDS Isop_2098 NC_014962.1 3036467 3036955 D COGs: COG0200 Ribosomal protein L15; InterPro IPR005749: IPR001196; KEGG: trq:TRQ2_1375 50S ribosomal protein L15; SPTR: 50S ribosomal protein L15; TIGRFAM: ribosomal protein L15; PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle; 50S ribosomal protein L15 3036467..3036955 Isosphaera pallida ATCC 43644 10156230 YP_004179228.1 CDS Isop_2099 NC_014962.1 3037076 3038470 D COGs: COG0201 Preprotein translocase subunit SecY; InterPro IPR002208; KEGG: plm:Plim_0496 preprotein translocase, SecY subunit; PFAM: SecY protein; SPTR: Preprotein translocase subunit secY; TIGRFAM: preprotein translocase, SecY subunit; PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit; protein translocase subunit secY/sec61 alpha 3037076..3038470 Isosphaera pallida ATCC 43644 10156231 YP_004179229.1 CDS Isop_2100 NC_014962.1 3038742 3038855 D InterPro IPR000473; KEGG: ele:Elen_2808 ribosomal protein L36; PFAM: ribosomal protein L36; SPTR: 50S ribosomal protein L36; TIGRFAM: ribosomal protein L36; PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type; 50S ribosomal protein L36 3038742..3038855 Isosphaera pallida ATCC 43644 10156232 YP_004179230.1 CDS Isop_2101 NC_014962.1 3039176 3039559 D COGs: COG0099 Ribosomal protein S13; InterPro IPR001892: IPR019980: IPR018269; KEGG: psl:Psta_2623 ribosomal protein S13; PFAM: ribosomal protein S13; SPTR: 30S ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13; 30S ribosomal protein S13 3039176..3039559 Isosphaera pallida ATCC 43644 10156233 YP_004179231.1 CDS Isop_2102 NC_014962.1 3039811 3040194 D COGs: COG0100 Ribosomal protein S11; InterPro IPR001971: IPR019981: IPR018102; KEGG: plm:Plim_0498 ribosomal protein S11; PFAM: ribosomal protein S11; SPTR: 30S ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; 30S ribosomal protein S11 3039811..3040194 Isosphaera pallida ATCC 43644 10156234 YP_004179232.1 CDS Isop_2103 NC_014962.1 3040499 3041128 D COGs: COG0522 Ribosomal protein S4 and related protein; InterPro IPR001912: IPR002942: IPR005709; KEGG: tpd:Teth39_0401 30S ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: 30S ribosomal protein S4; TIGRFAM: ribosomal protein S4; PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type; 30S ribosomal protein S4 3040499..3041128 Isosphaera pallida ATCC 43644 10156235 YP_004179233.1 CDS Isop_2104 NC_014962.1 3041365 3042372 D COGs: COG0202 DNA-directed RNA polymerase alpha subunit/40 kD subunit; InterProIPR011261: IPR011262: IPR011260: IPR011263: IPR 011773; KEGG: plm:Plim_0499 DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase insert; RNA polymerase dimerisation; RNA polymerase alpha subunit domain protein; SMART: RNA polymerase RpoA/D/Rpb3-type; SPTR: DNA-directed RNA polymerase subunit alpha; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type; DNA-directed RNA polymerase subunit alpha 3041365..3042372 Isosphaera pallida ATCC 43644 10156236 YP_004179234.1 CDS Isop_2105 NC_014962.1 3042530 3042967 D COGs: COG0203 Ribosomal protein L17; InterPro IPR000456; KEGG: mca:MCA2346 ribosomal protein L17; PFAM: ribosomal protein L17; SPTR: 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17; 50S ribosomal protein L17 3042530..3042967 Isosphaera pallida ATCC 43644 10156237 YP_004179235.1 CDS Isop_2106 NC_014962.1 3043110 3043586 D COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310; KEGG: tgo:TGME49_043580 HIT domain-containing protein; PFAM: histidine triad (HIT) protein; SPTR: Predicted protein; PFAM: HIT domain; histidine triad (HIT) protein 3043110..3043586 Isosphaera pallida ATCC 43644 10156238 YP_004179236.1 CDS Isop_2107 NC_014962.1 3043672 3044505 D COGs: COG0345 Pyrroline-5-carboxylate reductase; InterPro IPR004455: IPR000304; KEGG: acp:A2cp1_1474 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; PRIAM: Pyrroline-5-carboxylate reductase; SPTR: Pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase; pyrroline-5-carboxylate reductase 3043672..3044505 Isosphaera pallida ATCC 43644 10156239 YP_004179237.1 CDS Isop_2108 NC_014962.1 3044615 3045454 R COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198: IPR002347; KEGG: ade:Adeh_3849 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(3044615..3045454) Isosphaera pallida ATCC 43644 10156240 YP_004179238.1 CDS Isop_2109 NC_014962.1 3045444 3046478 R COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005269; KEGG: sti:Sthe_2745 hypothetical protein; PFAM: Conserved hypothetical protein CHP00730; SPTR: Putative uncharacterized protein; PFAM: Possible lysine decarboxylase; TIGRFAM: conserved hypothetical protein, DprA/Smf-related, family 1; conserved hypothetical protein, DprA/Smf-related, family 2; hypothetical protein complement(3045444..3046478) Isosphaera pallida ATCC 43644 10156241 YP_004179239.1 CDS Isop_2110 NC_014962.1 3046777 3047859 D COGs: COG0407 Uroporphyrinogen-III decarboxylase; InterPro IPR000257: IPR006361; KEGG: scl:sce8628 putative uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); PRIAM: Uroporphyrinogen decarboxylase; SPTR: Uroporphyrinogen III synthase, uroporhyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: uroporphyrinogen decarboxylase; uroporphyrinogen decarboxylase 3046777..3047859 Isosphaera pallida ATCC 43644 10156242 YP_004179240.1 CDS Isop_2111 NC_014962.1 3048380 3049378 D COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: hoh:Hoch_2233 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter; ABC transporter-like protein 3048380..3049378 Isosphaera pallida ATCC 43644 10156243 YP_004179241.1 CDS Isop_2112 NC_014962.1 3049498 3050577 D KEGG: sus:Acid_7688 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3049498..3050577 Isosphaera pallida ATCC 43644 10156244 YP_004179242.1 CDS Isop_2113 NC_014962.1 3050574 3051596 D COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: hoh:Hoch_2235 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter; ABC transporter-like protein 3050574..3051596 Isosphaera pallida ATCC 43644 10156245 YP_004179243.1 CDS Isop_2114 NC_014962.1 3051676 3052572 D KEGG: sti:Sthe_1080 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3051676..3052572 Isosphaera pallida ATCC 43644 10156246 YP_004179244.1 CDS Isop_2115 NC_014962.1 3052597 3053148 D COGs: COG2191 Formylmethanofuran dehydrogenase subunit E; InterPro IPR003814; KEGG: cyb:CYB_0846 hypothetical protein; PFAM: formylmethanofuran dehydrogenase subunit E region; SPTR: Conserved domain protein; PFAM: FmdE, Molybdenum formylmethanofuran dehydrogenase operon; formylmethanofuran dehydrogenase subunit E 3052597..3053148 Isosphaera pallida ATCC 43644 10156247 YP_004179245.1 CDS Isop_2116 NC_014962.1 3053281 3053637 R KEGG: drt:Dret_1972 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3053281..3053637) Isosphaera pallida ATCC 43644 10156248 YP_004179246.1 CDS Isop_2117 NC_014962.1 3053950 3055059 D COGs: COG0616 Periplasmic serine protease (ClpP class); InterPro IPR002142: IPR004635; KEGG: rba:RB1371 proteinase IV homolog YteI; PFAM: peptidase S49; SPTR: Proteinase IV homolog yteI; TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type; signal peptide peptidase SppA, 36K type 3053950..3055059 Isosphaera pallida ATCC 43644 10156249 YP_004179247.1 CDS Isop_2118 NC_014962.1 3055167 3056327 D COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: rba:RB6502 putative permease; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; PFAM: Predicted permease; hypothetical protein 3055167..3056327 Isosphaera pallida ATCC 43644 10156250 YP_004179248.1 CDS Isop_2119 NC_014962.1 3056320 3057186 D COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593: IPR017871: IPR003439; KEGG: gau:GAU_2113 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter-related protein; PFAM: ABC transporter; ABC transporter-like protein 3056320..3057186 Isosphaera pallida ATCC 43644 10156251 YP_004179249.1 CDS Isop_2120 NC_014962.1 3057556 3058383 R InterPro IPR014338; KEGG: reu:Reut_A0701 bifunctional uroporphyrinogen-III synthetase/uroporphyrin-III C-methyltransferase; SPTR: Transcriptional regulator, MarR family; TIGRFAM: repeat-companion domain protein; TIGRFAM: repeat-companion domain TIGR02996; repeat-companion domain-containing protein complement(3057556..3058383) Isosphaera pallida ATCC 43644 10156252 YP_004179250.1 CDS Isop_2121 NC_014962.1 3058646 3059017 D KEGG: bfo:BRAFLDRAFT_63381 hypothetical protein; SPTR: Gap in sequence; hypothetical protein 3058646..3059017 Isosphaera pallida ATCC 43644 10156253 YP_004179251.1 CDS Isop_2122 NC_014962.1 3058895 3059206 R KEGG: mar:MAE_47960 GP63-like protein; SPTR: GP63-like protein; hypothetical protein complement(3058895..3059206) Isosphaera pallida ATCC 43644 10156254 YP_004179252.1 CDS Isop_2123 NC_014962.1 3059694 3061355 D KEGG: tit:Thit_1395 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3059694..3061355 Isosphaera pallida ATCC 43644 10156255 YP_004179253.1 CDS Isop_2124 NC_014962.1 3061592 3062719 D COGs: COG3481 HD-superfamily hydrolase; InterPro IPR003607: IPR006674; KEGG: psl:Psta_4761 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: Nucleic acid-binding protein, putative; PFAM: HD domain; metal dependent phosphohydrolase 3061592..3062719 Isosphaera pallida ATCC 43644 10156256 YP_004179254.1 CDS Isop_2125 NC_014962.1 3062913 3063896 D InterPro IPR001120: IPR012902; KEGG: plm:Plim_4084 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 3062913..3063896 Isosphaera pallida ATCC 43644 10156257 YP_004179255.1 CDS Isop_2126 NC_014962.1 3063990 3065684 R COGs: COG0497 ATPase involved in DNA repair; InterPro IPR004604: IPR003395; KEGG: mta:Moth_1507 DNA repair protein RecN; PFAM: SMC domain protein; SPTR: DNA repair protein RecN; TIGRFAM: DNA repair protein RecN; PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN; DNA repair protein RecN complement(3063990..3065684) Isosphaera pallida ATCC 43644 10156258 YP_004179256.1 CDS Isop_2128 NC_014962.1 3066524 3066943 R COGs: COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase; InterPro IPR002579; KEGG: tel:tlr1214 methionine sulfoxide reductase B; PFAM: Methionine sulfoxide reductase B; PRIAM: Peptide-methionine (R)-S-oxide reductase; SPTR: Peptide methionine sulfoxide reductase msrB; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase; methionine-R-sulfoxide reductase complement(3066524..3066943) Isosphaera pallida ATCC 43644 10156260 YP_004179257.1 CDS Isop_2129 NC_014962.1 3067523 3068275 D InterPro IPR013424; KEGG: oan:Oant_2810 outer membrane autotransporter; SPTR: Putative uncharacterized protein; TIGRFAM: PEP-CTERM putative exosortase interaction domain; hypothetical protein 3067523..3068275 Isosphaera pallida ATCC 43644 10156261 YP_004179258.1 CDS Isop_2130 NC_014962.1 3068615 3070711 D KEGG: plm:Plim_0945 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3068615..3070711 Isosphaera pallida ATCC 43644 10156262 YP_004179259.1 CDS Isop_2131 NC_014962.1 3071163 3072869 R COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: sus:Acid_6453 outer membrane efflux protein; PFAM: outer membrane efflux protein; SPTR: Outer membrane efflux protein; PFAM: Outer membrane efflux protein; outer membrane efflux protein complement(3071163..3072869) Isosphaera pallida ATCC 43644 10156263 YP_004179260.1 CDS Isop_2132 NC_014962.1 3073604 3074806 D COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR016454: IPR000192; KEGG: rmr:Rmar_1215 aminotransferase class V; PFAM: aminotransferase class V; PRIAM: Cysteine desulfurase; SPTR: Aminotransferase class V; PFAM: Aminotransferase class-V; cysteine desulfurase 3073604..3074806 Isosphaera pallida ATCC 43644 10156265 YP_004179261.1 CDS Isop_2133 NC_014962.1 3074900 3076252 R COGs: COG0112 Glycine/serine hydroxymethyltransferase; InterPro IPR019798: IPR022272: IPR001085; KEGG: tro:trd_0755 serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase; PRIAM: Glycine hydroxymethyltransferase; SPTR: Serine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase; serine hydroxymethyltransferase complement(3074900..3076252) Isosphaera pallida ATCC 43644 10156266 YP_004179262.1 CDS Isop_2134 NC_014962.1 3076659 3078032 R KEGG: cma:Cmaq_1622 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3076659..3078032) Isosphaera pallida ATCC 43644 10156267 YP_004179263.1 CDS Isop_2135 NC_014962.1 3078260 3079093 R COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: sit:TM1040_3346 xylose isomerase-like TIM barrel; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: Myo-inositol catabolism protein; PFAM: Xylose isomerase-like TIM barrel; xylose isomerase domain-containing protein complement(3078260..3079093) Isosphaera pallida ATCC 43644 10156269 YP_004179264.1 CDS Isop_2136 NC_014962.1 3079315 3080748 R COGs: COG0515 Serine/threonine protein kinase; InterProIPR020635: IPR002290: IPR017441: IPR008271: IPR 017442: IPR000719; KEGG: hoh:Hoch_1432 serine/threonine protein kinase with WD40 repeats; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase with WD40 repeats; PFAM: Protein kinase domain; serine/threonine protein kinase complement(3079315..3080748) Isosphaera pallida ATCC 43644 10156270 YP_004179265.1 CDS Isop_2137 NC_014962.1 3081296 3084400 R COGs: COG0515 Serine/threonine protein kinase; InterProIPR020635: IPR002290: IPR008271: IPR017442: IPR 000719: IPR013026; KEGG: psl:Psta_0270 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine-protein kinase; PFAM: Protein kinase domain; serine/threonine protein kinase complement(3081296..3084400) Isosphaera pallida ATCC 43644 10156271 YP_004179266.1 CDS Isop_2138 NC_014962.1 3084944 3086518 R InterPro IPR004993; KEGG: afr:AFE_0805 auxin-responsive GH3-related protein; PFAM: GH3 auxin-responsive promoter; SPTR: Auxin-responsive GH3-related protein; PFAM: GH3 auxin-responsive promoter; GH3 auxin-responsive promoter complement(3084944..3086518) Isosphaera pallida ATCC 43644 10156272 YP_004179267.1 CDS Isop_2139 NC_014962.1 3086874 3087458 R COGs: COG3963 Phospholipid N-methyltransferase; InterPro IPR020598: IPR020596: IPR001737; KEGG: bbe:BBR47_00590 hypothetical protein; PFAM: ribosomal RNA adenine methylase transferase; SMART: Ribosomal RNA adenine methylase transferase-like; SPTR: Putative uncharacterized protein; PFAM: Ribosomal RNA adenine dimethylase; ribosomal RNA adenine methylase transferase complement(3086874..3087458) Isosphaera pallida ATCC 43644 10156273 YP_004179268.1 CDS Isop_2140 NC_014962.1 3087533 3088507 R COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: rmr:Rmar_0379 alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(3087533..3088507) Isosphaera pallida ATCC 43644 10156274 YP_004179269.1 CDS Isop_2141 NC_014962.1 3088986 3091667 R KEGG: tro:trd_1801 hypothetical protein; SPTR: Putative membrane protein; hypothetical protein complement(3088986..3091667) Isosphaera pallida ATCC 43644 10156275 YP_004179270.1 CDS Isop_2142 NC_014962.1 3091682 3093355 R COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593: IPR017871: IPR003439; KEGG: psl:Psta_2421 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter; PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family; ABC transporter-like protein complement(3091682..3093355) Isosphaera pallida ATCC 43644 10156276 YP_004179271.1 CDS Isop_2143 NC_014962.1 3093839 3094342 D KEGG: psl:Psta_4324 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; SPTR: Hypothetical membrane protein; hypothetical protein 3093839..3094342 Isosphaera pallida ATCC 43644 10156277 YP_004179272.1 CDS Isop_2144 NC_014962.1 3094386 3094988 R InterPro IPR002052; KEGG: aau:AAur_pTC10295 hypothetical protein; SPTR: N-6-adenine-methyltransferase; PFAM: DNA N-6-adenine-methyltransferase (Dam); hypothetical protein complement(3094386..3094988) Isosphaera pallida ATCC 43644 10156278 YP_004179273.1 CDS Isop_2145 NC_014962.1 3095038 3096174 R COGs: COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); InterPro IPR001001; KEGG: rba:RB10108 DNA polymerase III, beta chain; PFAM: DNA polymerase III beta chain; PRIAM: DNA-directed DNA polymerase; SMART: DNA polymerase III beta chain; SPTR: DNA polymerase III, beta chain; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit; DNA polymerase III subunit beta complement(3095038..3096174) Isosphaera pallida ATCC 43644 10156279 YP_004179274.1 CDS Isop_2146 NC_014962.1 3097170 3099608 D KEGG: dae:Dtox_2979 CRISPR-associated protein, Crm2 family; SPTR: CRISPR-associated protein, Crm2 family; PFAM: CRISPR-associated protein; TIGRFAM: CRISPR-associated protein, Crm2 family; hypothetical protein 3097170..3099608 Isosphaera pallida ATCC 43644 10156280 YP_004179275.1 CDS Isop_2147 NC_014962.1 3099611 3100996 D COGs: COG1769 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR019117; KEGG: hha:Hhal_0628 CRISPR-associated Cmr3 family protein; PFAM: CRISPR-associated protein, Cmr3; SPTR: CRISPR-associated protein, Cmr3 family; PFAM: CRISPR-associated protein (Cas_Cmr3); TIGRFAM: CRISPR-associated protein, Cmr3 family; CRISPR-associated protein Cmr3 3099611..3100996 Isosphaera pallida ATCC 43644 10156281 YP_004179276.1 CDS Isop_2148 NC_014962.1 3101117 3102082 D COGs: COG1336 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR013410: IPR005537; KEGG: rce:RC1_3484 CRISPR-associated RAMP protein, putative; PFAM: protein of unknown function DUF324; SPTR: CRISPR-associated RAMP protein, putative; TIGRFAM: CRISPR-associated RAMP protein, Cmr4 family; PFAM: RAMP superfamily; TIGRFAM: CRISPR-associated RAMP protein, Cmr4 family; Cmr4 family CRISPR-associated RAMP protein 3101117..3102082 Isosphaera pallida ATCC 43644 10156282 YP_004179277.1 CDS Isop_2149 NC_014962.1 3102162 3102635 D InterPro IPR010160; KEGG: dae:Dtox_2976 CRISPR-associated protein, Cmr5 family; PFAM: CRISPR-associated protein TM1791.1; SPTR: CRISPR-associated protein, Cmr5 family; TIGRFAM: CRISPR-associated protein, Cmr5 family; PFAM: CRISPR-associated protein (Cas_Cmr5); TIGRFAM: CRISPR-associated protein, Cmr5 family; Cmr5 family CRISPR-associated protein 3102162..3102635 Isosphaera pallida ATCC 43644 10156283 YP_004179278.1 CDS Isop_2150 NC_014962.1 3102688 3103704 D COGs: COG1604 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR010172: IPR005537; KEGG: hor:Hore_15110 CRISPR-associated RAMP protein, Cmr6 family; PFAM: protein of unknown function DUF324; SPTR: CRISPR-associated RAMP protein, Cmr6 family; TIGRFAM: CRISPR-associated RAMP protein, Cmr6 family; TIGRFAM: CRISPR-associated RAMP protein, Cmr6 family; Cmr6 family CRISPR-associated RAMP protein 3102688..3103704 Isosphaera pallida ATCC 43644 10156284 YP_004179279.1 CDS Isop_2151 NC_014962.1 3103757 3105451 D InterPro IPR007522; KEGG: rxy:Rxyl_0264 CRISPR-associated RAMP Cmr1 family protein; SPTR: CRISPR-associated protein, Cmr1 family; TIGRFAM: CRISPR-associated RAMP protein, Cmr1 family; TIGRFAM: CRISPR-associated RAMP protein, Cmr1 family; Cmr1 family CRISPR-associated RAMP protein 3103757..3105451 Isosphaera pallida ATCC 43644 10156285 YP_004179280.1 CDS Isop_2152 NC_014962.1 3105473 3106531 R COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR018130: IPR013154: IPR013149; KEGG: gbe:GbCGDNIH1_0098 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; SPTR: Alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; alcohol dehydrogenase zinc-binding domain-containing protein complement(3105473..3106531) Isosphaera pallida ATCC 43644 10156286 YP_004179281.1 CDS Isop_2153 NC_014962.1 3106767 3107282 R KEGG: eca:ECA0170 hypothetical protein; SPTR: Putative exported peptidase; hypothetical protein complement(3106767..3107282) Isosphaera pallida ATCC 43644 10156287 YP_004179282.1 CDS Isop_2154 NC_014962.1 3107526 3108668 R InterPro IPR001120: IPR012902; KEGG: plm:Plim_3656 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein complement(3107526..3108668) Isosphaera pallida ATCC 43644 10156288 YP_004179283.1 CDS Isop_2155 NC_014962.1 3109110 3110381 R InterPro IPR011701; KEGG: bpy:Bphyt_0287 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein complement(3109110..3110381) Isosphaera pallida ATCC 43644 10156289 YP_004179284.1 CDS Isop_2156 NC_014962.1 3110956 3111168 D KEGG: tva:TVAG_189160 chitinase; SPTR: Putative uncharacterized protein; manually curated; chitinase 3110956..3111168 Isosphaera pallida ATCC 43644 10156290 YP_004179285.1 CDS Isop_2157 NC_014962.1 3111248 3111673 R KEGG: bpy:Bphyt_0986 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3111248..3111673) Isosphaera pallida ATCC 43644 10156291 YP_004179286.1 CDS Isop_2158 NC_014962.1 3112021 3114519 D COGs: COG1225 Peroxiredoxin; InterPro IPR000866: IPR019734: IPR017936; KEGG: plm:Plim_3941 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: TPR repeat protein; PFAM: AhpC/TSA family; alkyl hydroperoxide reductase 3112021..3114519 Isosphaera pallida ATCC 43644 10156292 YP_004179287.1 CDS Isop_2159 NC_014962.1 3114861 3117104 D COGs: COG0515 Serine/threonine protein kinase; InterProIPR020635: IPR002290: IPR017441: IPR008271: IPR 017442: IPR005532: IPR000719; KEGG: psl:Psta_0057 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; protein of unknown function DUF323; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Probable serine/threonine-protein kinase pknB; PFAM: Protein kinase domain; Formylglycine-generating sulfatase enzyme; serine/threonine protein kinase 3114861..3117104 Isosphaera pallida ATCC 43644 10156293 YP_004179288.1 CDS Isop_2160 NC_014962.1 3117391 3119640 D InterPro IPR003997: IPR006143; KEGG: rba:RB10473 alkaline protease secretion protein AprE; PFAM: secretion protein HlyD family protein; SPTR: Similar to alkaline proteinase secretion protein aprE; secretion protein HlyD family protein 3117391..3119640 Isosphaera pallida ATCC 43644 10156294 YP_004179289.1 CDS Isop_2161 NC_014962.1 3119852 3121000 D COGs: COG1566 Multidrug resistance efflux pump; KEGG: psl:Psta_0858 hypothetical protein; SPTR: Probable multidrug efflux pump; TIGRFAM: RND family efflux transporter, MFP subunit; hypothetical protein 3119852..3121000 Isosphaera pallida ATCC 43644 10156295 YP_004179290.1 CDS Isop_2162 NC_014962.1 3121300 3123483 D InterPro IPR008915; KEGG: psl:Psta_0857 peptidase, M50 family; PFAM: peptidase M50; SPTR: Peptidase, M50 family; PFAM: Peptidase family M50; peptidase M50 3121300..3123483 Isosphaera pallida ATCC 43644 10156296 YP_004179291.1 CDS Isop_2163 NC_014962.1 3123634 3124329 D KEGG: scb:SCAB_72391 putative ATPase; SPTR: Putative ATPase; hypothetical protein 3123634..3124329 Isosphaera pallida ATCC 43644 10156297 YP_004179292.1 CDS Isop_2164 NC_014962.1 3124350 3125234 R COGs: COG1432 conserved hypothetical protein; KEGG: bgl:bglu_2g12170 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF88; TIGRFAM: conserved hypothetical protein TIGR00288; hypothetical protein complement(3124350..3125234) Isosphaera pallida ATCC 43644 10156298 YP_004179293.1 CDS Isop_2165 NC_014962.1 3125579 3126427 D InterPro IPR004843; KEGG: scl:sce5969 calcineurin-like phosphoesterase; PFAM: metallophosphoesterase; SPTR: Calcineurin-like phosphoesterase; PFAM: Calcineurin-like phosphoesterase; metallophosphoesterase 3125579..3126427 Isosphaera pallida ATCC 43644 10156299 YP_004179294.1 CDS Isop_2166 NC_014962.1 3126432 3127664 D COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000587: IPR000994; KEGG: psl:Psta_4481 peptidase M24; PFAM: peptidase M24; creatinase; SPTR: Putative peptidase; PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain; peptidase M24 3126432..3127664 Isosphaera pallida ATCC 43644 10156300 YP_004179295.1 CDS Isop_2167 NC_014962.1 3127755 3128333 D COGs: COG0511 Biotin carboxyl carrier protein; InterPro IPR001249: IPR000089; KEGG: plm:Plim_0064 acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; SPTR: Acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; biotin carboxyl carrier protein 3127755..3128333 Isosphaera pallida ATCC 43644 10156301 YP_004179296.1 CDS Isop_2168 NC_014962.1 3128410 3129765 D COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit; InterProIPR005479: IPR004549: IPR005481: IPR005482: IPR 011761: IPR011764; KEGG: plm:Plim_0063 acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; SPTR: Acetyl-CoA carboxylase, biotin carboxylase; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit; biotin carboxylase 3128410..3129765 Isosphaera pallida ATCC 43644 10156302 YP_004179297.1 CDS Isop_2169 NC_014962.1 3129807 3130640 D COGs: COG0692 Uracil DNA glycosylase; InterPro IPR018085: IPR002043: IPR005122; KEGG: cai:Caci_5297 uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase superfamily; SPTR: Uracil-DNA glycosylase; TIGRFAM: uracil-DNA glycosylase; PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase; uracil-DNA glycosylase 3129807..3130640 Isosphaera pallida ATCC 43644 10156303 YP_004179298.1 CDS Isop_2170 NC_014962.1 3130714 3132270 D KEGG: dma:DMR_46130 hypothetical membrane protein; SPTR: Hypothetical membrane protein; hypothetical protein 3130714..3132270 Isosphaera pallida ATCC 43644 10156304 YP_004179299.1 CDS Isop_2171 NC_014962.1 3132280 3132537 R COGs: COG0695 Glutaredoxin and related protein; InterPro IPR011767: IPR014025: IPR002109; KEGG: pde:Pden_2586 glutaredoxin 3; PFAM: glutaredoxin; SPTR: Glutaredoxin 3; PFAM: Glutaredoxin; glutaredoxin complement(3132280..3132537) Isosphaera pallida ATCC 43644 10156305 YP_004179300.1 CDS Isop_2172 NC_014962.1 3133273 3136233 R COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR017900: IPR006655: IPR006478: IPR001041: IPR 006963: IPR006656: IPR006657: IPR017896; KEGG: mno:Mnod_5226 formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; ferredoxin; molydopterin dinucleotide-binding region; SPTR: Formate dehydrogenase, alpha subunit; TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; 4Fe-4S binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: formate dehydrogenase, alpha subunit, archaeal-type; NAD-dependent formate dehydrogenase iron-sulfur protein; NAD-dependent formate dehydrogenase catalytic subunit complement(3133273..3136233) Isosphaera pallida ATCC 43644 10156306 YP_004179301.1 CDS Isop_2173 NC_014962.1 3136715 3137473 R COGs: COG1891 conserved hypothetical protein; InterPro IPR007565; KEGG: mex:Mext_1844 hypothetical protein; PFAM: protein of unknown function DUF556; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF556); hypothetical protein complement(3136715..3137473) Isosphaera pallida ATCC 43644 10156307 YP_004179302.1 CDS Isop_2174 NC_014962.1 3137969 3138727 R InterPro IPR010496; KEGG: psl:Psta_3759 protein of unknown function DUF1080; PFAM: protein of unknown function DUF1080; SPTR: Putative large multi-functional protein; PFAM: Domain of Unknown Function (DUF1080); hypothetical protein complement(3137969..3138727) Isosphaera pallida ATCC 43644 10156308 YP_004179303.1 CDS Isop_2175 NC_014962.1 3139959 3141332 D COGs: COG1397 ADP-ribosylglycohydrolase; InterPro IPR005502; KEGG: syf:Synpcc7942_1562 ADP-ribosylglycohydrolase-like; PFAM: ADP-ribosylation/Crystallin J1; SPTR: Probable ADP-ribosylglycohydrolase; PFAM: ADP-ribosylglycohydrolase; ADP-ribosylation/Crystallin J1 3139959..3141332 Isosphaera pallida ATCC 43644 10156309 YP_004179304.1 CDS Isop_2176 NC_014962.1 3167717 3167908 R hypothetical protein complement(3167717..3167908) Isosphaera pallida ATCC 43644 10156310 YP_004179305.1 CDS Isop_2177 NC_014962.1 3168558 3168734 D KEGG: lma:LmjF06.1150 hypothetical protein; hypothetical protein 3168558..3168734 Isosphaera pallida ATCC 43644 10156311 YP_004179306.1 CDS Isop_2178 NC_014962.1 3168888 3170525 R KEGG: plm:Plim_2074 hypothetical protein; SPTR: Probable xanthan lyase; hypothetical protein complement(3168888..3170525) Isosphaera pallida ATCC 43644 10156312 YP_004179307.1 CDS Isop_2179 NC_014962.1 3170648 3172018 R COGs: COG2355 Zn-dependent dipeptidase microsomal dipeptidase homolog; InterPro IPR000169: IPR008257; KEGG: psl:Psta_1911 membrane dipeptidase; PFAM: peptidase M19 renal dipeptidase; PRIAM: Membrane dipeptidase; SPTR: Membrane dipeptidase; PFAM: Membrane dipeptidase (Peptidase family M19); membrane dipeptidase complement(3170648..3172018) Isosphaera pallida ATCC 43644 10156313 YP_004179308.1 CDS Isop_2181 NC_014962.1 3172894 3174633 R KEGG: dal:Dalk_2449 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3172894..3174633) Isosphaera pallida ATCC 43644 10156315 YP_004179309.1 CDS Isop_2182 NC_014962.1 3175046 3177550 R COGs: COG0515 Serine/threonine protein kinase; InterProIPR020635: IPR002290: IPR008271: IPR017442: IPR 005532: IPR000719; KEGG: rba:RB1892 serine/threonine protein kinase; PFAM: protein of unknown function DUF323; Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain; Formylglycine-generating sulfatase enzyme; serine/threonine protein kinase complement(3175046..3177550) Isosphaera pallida ATCC 43644 10156317 YP_004179310.1 CDS Isop_2183 NC_014962.1 3177906 3178916 R COGs: COG3622 Hydroxypyruvate isomerase; InterPro IPR012307; KEGG: cag:Cagg_1301 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase domain-containing protein TIM barrel; PRIAM: Hydroxypyruvate isomerase; SPTR: Xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase-like TIM barrel; Hydroxypyruvate isomerase complement(3177906..3178916) Isosphaera pallida ATCC 43644 10156318 YP_004179311.1 CDS Isop_2184 NC_014962.1 3179147 3181363 R InterPro IPR002035; KEGG: psl:Psta_3764 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: von Willebrand factor type A domain; hypothetical protein complement(3179147..3181363) Isosphaera pallida ATCC 43644 10156319 YP_004179312.1 CDS Isop_2185 NC_014962.1 3182161 3183138 R COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR006311: IPR012307: IPR017909; KEGG: psl:Psta_2977 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: Xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; xylose isomerase domain-containing protein complement(3182161..3183138) Isosphaera pallida ATCC 43644 10156320 YP_004179313.1 CDS Isop_2186 NC_014962.1 3183499 3184224 D InterPro IPR005543; KEGG: mta:Moth_0837 stage V sporulation protein D; PFAM: PASTA domain containing protein; SPTR: PASTA domain containing protein; PFAM: PASTA domain; protein PASTA domain-containing protein 3183499..3184224 Isosphaera pallida ATCC 43644 10156321 YP_004179314.1 CDS Isop_2187 NC_014962.1 3184358 3189640 D COGs: COG2815 conserved hypothetical protein; InterPro IPR005543; KEGG: cwo:Cwoe_0017 serine/threonine protein kinase with PASTA sensor(s); PFAM: PASTA domain containing protein; SPTR: Serine/threonine protein kinase with PASTA sensor(S); PFAM: PASTA domain; protein PASTA domain-containing protein 3184358..3189640 Isosphaera pallida ATCC 43644 10156322 YP_004179315.1 CDS Isop_2188 NC_014962.1 3189952 3191223 D COGs: COG1225 Peroxiredoxin; InterPro IPR017937: IPR000866: IPR017936; KEGG: ote:Oter_2095 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: AhpC/TSA family; alkyl hydroperoxide reductase 3189952..3191223 Isosphaera pallida ATCC 43644 10156323 YP_004179316.1 CDS Isop_2189 NC_014962.1 3191404 3192501 D InterPro IPR017937: IPR000866: IPR017936; KEGG: ote:Oter_2095 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: AhpC/TSA family; alkyl hydroperoxide reductase 3191404..3192501 Isosphaera pallida ATCC 43644 10156324 YP_004179317.1 CDS Isop_2190 NC_014962.1 3192687 3193211 R KEGG: tro:trd_0839 O-antigen polymerase family; SPTR: O-Antigen Polymerase family; hypothetical protein complement(3192687..3193211) Isosphaera pallida ATCC 43644 10156325 YP_004179318.1 CDS Isop_2191 NC_014962.1 3193389 3194312 D COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR000560: IPR012307; KEGG: gym:GYMC10_3280 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: Xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase-like TIM barrel; xylose isomerase domain-containing protein 3193389..3194312 Isosphaera pallida ATCC 43644 10156326 YP_004179319.1 CDS Isop_2192 NC_014962.1 3194363 3195391 R COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; InterPro IPR001412: IPR020060: IPR020058; KEGG: afw:Anae109_0319 glutamate--tRNA ligase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; SPTR: Glutamyl-Q tRNA(Asp) synthetase; PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-queuosine tRNA(Asp) synthetase; glutamyl/glutaminyl-tRNA synthetase catalytic domain-containing protein complement(3194363..3195391) Isosphaera pallida ATCC 43644 10156327 YP_004179320.1 CDS Isop_2193 NC_014962.1 3195675 3196679 D COGs: COG1186 Protein chain release factor B; InterPro IPR004374: IPR005139: IPR000352; KEGG: amu:Amuc_0245 peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; SPTR: Peptide chain release factor 2; TIGRFAM: peptide chain release factor 2; PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2; peptide chain release factor 2 (bRF-2) 3195675..3196679 Isosphaera pallida ATCC 43644 10156328 YP_004179321.1 CDS Isop_2194 NC_014962.1 3196916 3197797 D COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: psl:Psta_2022 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Hydrolase, carbon-nitrogen family protein; PFAM: Carbon-nitrogen hydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 3196916..3197797 Isosphaera pallida ATCC 43644 10156329 YP_004179322.1 CDS Isop_2195 NC_014962.1 3198060 3199289 D InterPro IPR001917: IPR001330; KEGG: plm:Plim_4048 cycloartenol synthase-like protein; PFAM: Prenyltransferase/squalene oxidase; SPTR: Putative uncharacterized protein; prenyltransferase/squalene oxidase 3198060..3199289 Isosphaera pallida ATCC 43644 10156330 YP_004179323.1 CDS Isop_2196 NC_014962.1 3199387 3200865 R KEGG: mtp:Mthe_1075 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3199387..3200865) Isosphaera pallida ATCC 43644 10156331 YP_004179324.1 CDS Isop_2197 NC_014962.1 3201099 3201956 D InterPro IPR013216; KEGG: rca:Rcas_0141 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: Methyltransferase domain; type 11 methyltransferase 3201099..3201956 Isosphaera pallida ATCC 43644 10156332 YP_004179325.1 CDS Isop_2198 NC_014962.1 3202135 3203832 D COGs: COG3379 conserved hypothetical protein; InterPro IPR005829: IPR002591; KEGG: htu:Htur_5256 type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; SPTR: Type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase; type I phosphodiesterase/nucleotide pyrophosphatase 3202135..3203832 Isosphaera pallida ATCC 43644 10156333 YP_004179326.1 CDS Isop_2199 NC_014962.1 3203870 3205282 R InterPro IPR005829: IPR003663; KEGG: nml:Namu_4863 sugar transporter; SPTR: Sugar transporter; TIGRFAM: sugar transporter; PFAM: Sugar (and other) transporter; TIGRFAM: MFS transporter, sugar porter (SP) family; sugar transporter complement(3203870..3205282) Isosphaera pallida ATCC 43644 10156334 YP_004179327.1 CDS Isop_2200 NC_014962.1 3205296 3206150 R KEGG: pan:PODANSg965 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: PGAP1-like protein; hypothetical protein complement(3205296..3206150) Isosphaera pallida ATCC 43644 10156335 YP_004179328.1 CDS Isop_2201 NC_014962.1 3206683 3207456 D KEGG: rba:RB6430 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3206683..3207456 Isosphaera pallida ATCC 43644 10156336 YP_004179329.1 CDS Isop_2202 NC_014962.1 3207652 3209499 R InterPro IPR006162; KEGG: kpe:KPK_A0192 hypothetical protein; SPTR: Membrane protein; hypothetical protein complement(3207652..3209499) Isosphaera pallida ATCC 43644 10156337 YP_004179330.1 CDS Isop_2203 NC_014962.1 3209499 3210968 R KEGG: cnb:CNBH3510 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3209499..3210968) Isosphaera pallida ATCC 43644 10156338 YP_004179331.1 CDS Isop_2204 NC_014962.1 3211472 3211678 D KEGG: cci:CC1G_14467 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3211472..3211678 Isosphaera pallida ATCC 43644 10156339 YP_004179332.1 CDS Isop_2205 NC_014962.1 3211750 3212019 D KEGG: ure:UREG_05390 hypothetical protein; hypothetical protein 3211750..3212019 Isosphaera pallida ATCC 43644 10156340 YP_004179333.1 CDS Isop_2206 NC_014962.1 3212494 3212736 R KEGG: hdu:HD0089 transcription regulator; SPTR: Probable transcription regulator; hypothetical protein complement(3212494..3212736) Isosphaera pallida ATCC 43644 10156341 YP_004179334.1 CDS Isop_2207 NC_014962.1 3213624 3214481 D COGs: COG0207 Thymidylate synthase; InterPro IPR020940: IPR000398; KEGG: msv:Mesil_0097 thymidylate synthase; PFAM: thymidylate synthase; PRIAM: Thymidylate synthase; SPTR: Thymidylate synthase; TIGRFAM: thymidylate synthase; PFAM: Thymidylate synthase; TIGRFAM: thymidylate synthase; thymidylate synthase 3213624..3214481 Isosphaera pallida ATCC 43644 10156342 YP_004179335.1 CDS Isop_2208 NC_014962.1 3214833 3215906 D InterPro IPR001120: IPR012902; KEGG: plm:Plim_1767 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 3214833..3215906 Isosphaera pallida ATCC 43644 10156343 YP_004179336.1 CDS Isop_2209 NC_014962.1 3216172 3216603 D KEGG: sco:SCO5580 docking protein; SPTR: Putative prokaryotic docking protein; hypothetical protein 3216172..3216603 Isosphaera pallida ATCC 43644 10156344 YP_004179337.1 CDS Isop_2210 NC_014962.1 3216777 3217901 R KEGG: psl:Psta_0705 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3216777..3217901) Isosphaera pallida ATCC 43644 10156345 YP_004179338.1 CDS Isop_2211 NC_014962.1 3218182 3218586 R KEGG: ana:all4578 hypothetical protein; SPTR: All4578 protein; hypothetical protein complement(3218182..3218586) Isosphaera pallida ATCC 43644 10156346 YP_004179339.1 CDS Isop_2212 NC_014962.1 3218583 3219008 R KEGG: aau:AAur_3400 putative lipoprotein; SPTR: Predicted protein; hypothetical protein complement(3218583..3219008) Isosphaera pallida ATCC 43644 10156347 YP_004179340.1 CDS Isop_2213 NC_014962.1 3219622 3220656 D COGs: COG0583 Transcriptional regulator; InterPro IPR000847: IPR005119; KEGG: psl:Psta_0198 transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; SPTR: Transcriptional regulator, LysR family; PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family; transcriptional regulator, LysR family 3219622..3220656 Isosphaera pallida ATCC 43644 10156348 YP_004179341.1 CDS Isop_2214 NC_014962.1 3221292 3225911 D COGs: COG0069 Glutamate synthase domain 2; InterProIPR000583: IPR006982: IPR002932: IPR002489: IPR 017932; KEGG: ttr:Tter_0474 glutamate synthase (ferredoxin); PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein; PRIAM: Glutamate synthase (ferredoxin); SPTR: Glutamate synthase (Ferredoxin); PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II; glutamate synthase (NADH) large subunit 3221292..3225911 Isosphaera pallida ATCC 43644 10156349 YP_004179342.1 CDS Isop_2215 NC_014962.1 3226091 3227587 D COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR006005: IPR000759: IPR013027; KEGG: tcu:Tcur_2865 glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Glutamate synthase, NADH/NADPH, small subunit; TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthases, NADH/NADPH, small subunit; glutamate synthase (NADH) small subunit 3226091..3227587 Isosphaera pallida ATCC 43644 10156350 YP_004179343.1 CDS Isop_2216 NC_014962.1 3227989 3230019 D COGs: COG0515 Serine/threonine protein kinase; InterProIPR020635: IPR002290: IPR017441: IPR017442: IPR 000719; KEGG: rba:RB2673 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain; serine/threonine protein kinase 3227989..3230019 Isosphaera pallida ATCC 43644 10156351 YP_004179344.1 CDS Isop_2217 NC_014962.1 3230033 3231013 R KEGG: ana:all7320 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Predicted periplasmic protein (DUF2233); hypothetical protein complement(3230033..3231013) Isosphaera pallida ATCC 43644 10156352 YP_004179345.1 CDS Isop_2218 NC_014962.1 3231010 3231675 R InterPro IPR004096; KEGG: cyp:PCC8801_1056 4-vinyl reductase 4VR; PFAM: 4-vinyl reductase 4VR; SPTR: 4-vinyl reductase 4VR; PFAM: V4R domain; 4-vinyl reductase 4VR complement(3231010..3231675) Isosphaera pallida ATCC 43644 10156353 YP_004179346.1 CDS Isop_2219 NC_014962.1 3231938 3232435 R InterPro IPR012128; KEGG: cyb:CYB_0575 phycobilisome protein; PFAM: Phycocyanin; SPTR: Phycobilisome protein; PFAM: Phycobilisome protein; Phycocyanin complement(3231938..3232435) Isosphaera pallida ATCC 43644 10156354 YP_004179347.1 CDS Isop_2220 NC_014962.1 3232548 3233066 R KEGG: ade:Adeh_0691 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3232548..3233066) Isosphaera pallida ATCC 43644 10156355 YP_004179348.1 CDS Isop_2221 NC_014962.1 3233377 3234156 R COGs: COG1719 hydrocarbon binding protein (contains V4R domain); InterPro IPR004096; KEGG: tel:tll0856 hypothetical protein; PFAM: 4-vinyl reductase 4VR; SPTR: 4-vinyl reductase 4VR; PFAM: V4R domain; 4-vinyl reductase 4VR complement(3233377..3234156) Isosphaera pallida ATCC 43644 10156356 YP_004179349.1 CDS Isop_2222 NC_014962.1 3234355 3234828 R COGs: COG0633 Ferredoxin; InterPro IPR001055: IPR001041; KEGG: cyt:cce_2108 ferredoxin; PFAM: ferredoxin; SPTR: Probable ferredoxin; PFAM: 2Fe-2S iron-sulfur cluster binding domain; ferredoxin complement(3234355..3234828) Isosphaera pallida ATCC 43644 10156357 YP_004179350.1 CDS Isop_2223 NC_014962.1 3234965 3235702 R InterPro IPR016053; KEGG: tps:THAPSDRAFT_17865 hypothetical protein; PFAM: Haem oxygenase-like; SPTR: Predicted protein; PFAM: Heme oxygenase; heme oxygenase complement(3234965..3235702) Isosphaera pallida ATCC 43644 10156358 YP_004179351.1 CDS Isop_2224 NC_014962.1 3235856 3237712 R COGs: COG0515 Serine/threonine protein kinase; InterProIPR020635: IPR002290: IPR017441: IPR017442: IPR 000719; KEGG: ttr:Tter_1004 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain; serine/threonine protein kinase complement(3235856..3237712) Isosphaera pallida ATCC 43644 10156359 YP_004179352.1 CDS Isop_2225 NC_014962.1 3238162 3239319 R COGs: COG0515 Serine/threonine protein kinase; InterPro IPR002290: IPR020635: IPR017442: IPR000719; KEGG: hoh:Hoch_5516 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine kinase PKN9; PFAM: Protein kinase domain; serine/threonine protein kinase complement(3238162..3239319) Isosphaera pallida ATCC 43644 10156360 YP_004179353.1 CDS Isop_2226 NC_014962.1 3239721 3241262 D COGs: COG2271 Sugar phosphate permease; InterPro IPR011701; KEGG: rxy:Rxyl_2476 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein 3239721..3241262 Isosphaera pallida ATCC 43644 10156361 YP_004179354.1 CDS Isop_2227 NC_014962.1 3241312 3242694 R COGs: COG5002 Signal transduction histidine kinase; InterProIPR000014: IPR003661: IPR003594: IPR004358: IPR 013767: IPR005467; KEGG: plm:Plim_1491 PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; SPTR: Sensory box sensor histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; PAS/PAC sensor signal transduction histidine kinase complement(3241312..3242694) Isosphaera pallida ATCC 43644 10156362 YP_004179355.1 CDS Isop_2228 NC_014962.1 3242691 3243428 R COGs: COG0663 Carbonic anhydrase/acetyltransferase isoleucine patch superfamily; InterPro IPR001451; KEGG: mxa:MXAN_3783 hexapaptide repeat-containing transferase; SPTR: Transferase hexapeptide repeat family protein; hypothetical protein complement(3242691..3243428) Isosphaera pallida ATCC 43644 10156363 YP_004179356.1 CDS Isop_2229 NC_014962.1 3243839 3244372 D KEGG: dac:Daci_2332 beta-lactamase; SPTR: Putative uncharacterized protein; hypothetical protein 3243839..3244372 Isosphaera pallida ATCC 43644 10156364 YP_004179357.1 CDS Isop_2230 NC_014962.1 3244359 3244934 R KEGG: cpi:Cpin_1878 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3244359..3244934) Isosphaera pallida ATCC 43644 10156365 YP_004179358.1 CDS Isop_2231 NC_014962.1 3245183 3247717 R COGs: COG0308 Aminopeptidase N; KEGG: rba:RB5627 aminopeptidase; SPTR: Putative aminopeptidase; PFAM: Peptidase family M1; aminopeptidase complement(3245183..3247717) Isosphaera pallida ATCC 43644 10156366 YP_004179359.1 CDS Isop_2232 NC_014962.1 3248152 3248946 D COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593: IPR017871: IPR003439; KEGG: sus:Acid_6574 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter; ABC transporter-like protein 3248152..3248946 Isosphaera pallida ATCC 43644 10156367 YP_004179360.1 CDS Isop_2233 NC_014962.1 3249017 3250387 D KEGG: xac:XAC1202 oligopeptide transporter; SPTR: Oligopeptide transporter; hypothetical protein 3249017..3250387 Isosphaera pallida ATCC 43644 10156368 YP_004179361.1 CDS Isop_2234 NC_014962.1 3250374 3251504 R COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: dma:DMR_42800 glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase complement(3250374..3251504) Isosphaera pallida ATCC 43644 10156369 YP_004179362.1 CDS Isop_2235 NC_014962.1 3251623 3253926 R COGs: COG2217 Cation transport ATPase; InterProIPR018303: IPR006404: IPR006416: IPR001757: IPR 008250: IPR005834; KEGG: dsh:Dshi_3947 heavy metal translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; SPTR: Cation transport ATPase; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; heavy metal translocating P-type ATPase complement(3251623..3253926) Isosphaera pallida ATCC 43644 10156370 YP_004179363.1 CDS Isop_2236 NC_014962.1 3254743 3259500 D InterPro IPR019734: IPR001440: IPR013026; KEGG: mxa:MXAN_6419 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: TPR domain protein; hypothetical protein 3254743..3259500 Isosphaera pallida ATCC 43644 10156371 YP_004179364.1 CDS Isop_2237 NC_014962.1 3259861 3264741 D InterPro IPR019734: IPR001440: IPR013026; KEGG: sus:Acid_3324 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: TPR domain protein; hypothetical protein 3259861..3264741 Isosphaera pallida ATCC 43644 10156372 YP_004179365.1 CDS Isop_2238 NC_014962.1 3265166 3269971 D InterPro IPR019734: IPR001440: IPR013026; KEGG: ade:Adeh_3311 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: TPR domain protein; hypothetical protein 3265166..3269971 Isosphaera pallida ATCC 43644 10156373 YP_004179366.1 CDS Isop_2239 NC_014962.1 3269968 3271026 D InterPro IPR019127; KEGG: rba:RB2461 hypothetical protein; PFAM: Exosortase EpsH-related; SPTR: Putative uncharacterized protein; PFAM: Transmembrane exosortase (Exosortase_EpsH); TIGRFAM: eight transmembrane protein EpsH (proposed exosortase); Exosortase EpsH-like protein 3269968..3271026 Isosphaera pallida ATCC 43644 10156374 YP_004179367.1 CDS Isop_2240 NC_014962.1 3270996 3271784 D KEGG: azl:AZL_027420 UvrD/REP helicase; SPTR: SNF2-related protein; hypothetical protein 3270996..3271784 Isosphaera pallida ATCC 43644 10156375 YP_004179368.1 CDS Isop_2241 NC_014962.1 3271950 3273179 D KEGG: bgl:bglu_1p1330 TonB family protein; SPTR: Predicted protein; hypothetical protein 3271950..3273179 Isosphaera pallida ATCC 43644 10156376 YP_004179369.1 CDS Isop_2242 NC_014962.1 3273251 3274264 R COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR006268: IPR006218; KEGG: psl:Psta_4054 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; SPTR: 3-deoxy-7-phosphoheptulonate synthase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase complement(3273251..3274264) Isosphaera pallida ATCC 43644 10156377 YP_004179370.1 CDS Isop_2243 NC_014962.1 3274334 3274498 R KEGG: mgr:MGG_12809 hypothetical protein; hypothetical protein complement(3274334..3274498) Isosphaera pallida ATCC 43644 10156378 YP_004179371.1 CDS Isop_2244 NC_014962.1 3275087 3277030 D KEGG: cyn:Cyan7425_3991 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3275087..3277030 Isosphaera pallida ATCC 43644 10156379 YP_004179372.1 CDS Isop_2245 NC_014962.1 3277242 3278123 R COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: pde:Pden_1042 alpha/beta hydrolase fold; PFAM: alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(3277242..3278123) Isosphaera pallida ATCC 43644 10156380 YP_004179373.1 CDS Isop_2246 NC_014962.1 3278530 3281844 D COGs: COG3604 Transcriptional regulator containing GAF AAA-type ATPase and DNA binding domains; InterPro IPR003593: IPR002078: IPR020441: IPR002197; KEGG: plm:Plim_0197 sigma-54 factor interaction domain-containing protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; SPTR: Sigma-54 factor interaction domain-containing protein; PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; Fis family sigma-54 specific transcriptional regulator 3278530..3281844 Isosphaera pallida ATCC 43644 10156381 YP_004179374.1 CDS Isop_2247 NC_014962.1 3281859 3283316 D KEGG: plm:Plim_2351 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: RNA cap guanine-N2 methyltransferase; hypothetical protein 3281859..3283316 Isosphaera pallida ATCC 43644 10156382 YP_004179375.1 CDS Isop_2248 NC_014962.1 3283498 3284358 D COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR017937: IPR006662: IPR013766: IPR017936; KEGG: psl:Psta_1606 thioredoxin domain protein; PFAM: Thioredoxin domain-containing protein; SPTR: Thioredoxin domain protein; PFAM: Thioredoxin; TIGRFAM: thioredoxin; thioredoxin domain-containing protein 3283498..3284358 Isosphaera pallida ATCC 43644 10156383 YP_004179376.1 CDS Isop_2249 NC_014962.1 3284362 3285165 R KEGG: psl:Psta_1030 endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase complement(3284362..3285165) Isosphaera pallida ATCC 43644 10156384 YP_004179377.1 CDS Isop_2250 NC_014962.1 3285188 3285817 R COGs: COG1335 Amidase related to nicotinamidase; KEGG: sus:Acid_4520 isochorismatase hydrolase; SPTR: Isochorismatase hydrolase; PFAM: Isochorismatase family; isochorismatase hydrolase complement(3285188..3285817) Isosphaera pallida ATCC 43644 10156385 YP_004179378.1 CDS Isop_2251 NC_014962.1 3286904 3287431 D InterPro IPR001007; KEGG: ctp:CTRG_06004 hypothetical protein; SPTR: Predicted protein; hypothetical protein 3286904..3287431 Isosphaera pallida ATCC 43644 10156386 YP_004179379.1 CDS Isop_2252 NC_014962.1 3287494 3287763 R KEGG: tcr:503551.20 hypothetical protein; hypothetical protein complement(3287494..3287763) Isosphaera pallida ATCC 43644 10156387 YP_004179380.1 CDS Isop_2253 NC_014962.1 3287808 3288992 R KEGG: rba:RB4002 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3287808..3288992) Isosphaera pallida ATCC 43644 10156388 YP_004179381.1 CDS Isop_2254 NC_014962.1 3289223 3290605 D KEGG: aba:Acid345_4727 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3289223..3290605 Isosphaera pallida ATCC 43644 10156389 YP_004179382.1 CDS Isop_2255 NC_014962.1 3290880 3291611 D KEGG: ank:AnaeK_3620 GAF sensor signal transduction histidine kinase; SPTR: GAF sensor signal transduction histidine kinase; hypothetical protein 3290880..3291611 Isosphaera pallida ATCC 43644 10156390 YP_004179383.1 CDS Isop_2256 NC_014962.1 3291777 3293285 R COGs: COG1520 FOG: WD40-like repeat; InterPro IPR018391: IPR002372; KEGG: plm:Plim_3570 pyrrolo-quinoline quinone; PFAM: Pyrrolo-quinoline quinone repeat-containing protein; SPTR: Predicted cell surface protein/ lipoprotein; PFAM: PQQ enzyme repeat; pyrrolo-quinoline quinone repeat-containing protein complement(3291777..3293285) Isosphaera pallida ATCC 43644 10156391 YP_004179384.1 CDS Isop_2257 NC_014962.1 3294050 3294454 R COGs: COG0140 Phosphoribosyl-ATP pyrophosphohydrolase; InterPro IPR008179: IPR021130; KEGG: psl:Psta_4703 phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase-like; SPTR: Phosphoribosyl-ATP diphosphatase; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase; phosphoribosyl-ATP diphosphatase complement(3294050..3294454) Isosphaera pallida ATCC 43644 10156392 YP_004179385.1 CDS Isop_2258 NC_014962.1 3294515 3296173 R COGs: COG1574 metal-dependent hydrolase with the TIM-barrel fold; InterPro IPR013108; KEGG: scl:sce3068 putative secreted protein; PFAM: Amidohydrolase 3; SPTR: Putative lipoprotein; PFAM: Amidohydrolase family; amidohydrolase complement(3294515..3296173) Isosphaera pallida ATCC 43644 10156393 YP_004179386.1 CDS Isop_2259 NC_014962.1 3296533 3297942 R KEGG: psl:Psta_2862 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: Copper type II ascorbate-dependent monooxygenase, C-terminal domain; alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen complement(3296533..3297942) Isosphaera pallida ATCC 43644 10156394 YP_004179387.1 CDS Isop_2260 NC_014962.1 3298242 3299153 R COGs: COG3970 Fumarylacetoacetate (FAA) hydrolase family protein; InterPro IPR002529; KEGG: scl:sce8243 fumarylacetoacetase family protein; PFAM: fumarylacetoacetate (FAA) hydrolase; SPTR: Fumarylacetoacetase family protein; PFAM: Fumarylacetoacetate (FAA) hydrolase family; fumarylacetoacetate (FAA) hydrolase complement(3298242..3299153) Isosphaera pallida ATCC 43644 10156395 YP_004179388.1 CDS Isop_2261 NC_014962.1 3300088 3301890 R COGs: COG0405 Gamma-glutamyltransferase; InterPro IPR000101; KEGG: aba:Acid345_3078 gamma-glutamyltransferase 2; PFAM: gamma-glutamyltranspeptidase; PRIAM: Gamma-glutamyltransferase; SPTR: Gamma-glutamyltransferase 2. Threonine peptidase. MEROPS family T03; PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase complement(3300088..3301890) Isosphaera pallida ATCC 43644 10156396 YP_004179389.1 CDS Isop_2262 NC_014962.1 3302173 3303450 R COGs: COG2133 Glucose/sorbosone dehydrogenase; KEGG: plm:Plim_0363 glucose sorbosone dehydrogenase; SPTR: Protein up-regulated by thyroid hormone-putative PQQ-dependent glucose dehydrogenase; PFAM: Glucose / Sorbosone dehydrogenase; glucose sorbosone dehydrogenase complement(3302173..3303450) Isosphaera pallida ATCC 43644 10156397 YP_004179390.1 CDS Isop_2263 NC_014962.1 3303959 3304393 R KEGG: rba:RB2907 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3303959..3304393) Isosphaera pallida ATCC 43644 10156398 YP_004179391.1 CDS Isop_2264 NC_014962.1 3304698 3305537 R COGs: COG0289 Dihydrodipicolinate reductase; InterPro IPR000846: IPR011770; KEGG: psl:Psta_0616 dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase; PRIAM: Dihydrodipicolinate reductase; SPTR: Dihydrodipicolinate reductase; TIGRFAM: dihydrodipicolinate reductase; PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase; dihydrodipicolinate reductase complement(3304698..3305537) Isosphaera pallida ATCC 43644 10156399 YP_004179392.1 CDS Isop_2265 NC_014962.1 3305602 3306570 R COGs: COG1305 Transglutaminase-like protein; InterPro IPR002931: IPR013589; KEGG: cag:Cagg_2254 transglutaminase domain protein; PFAM: transglutaminase domain-containing protein; transglutaminase domain protein; SMART: transglutaminase domain-containing protein; SPTR: Transglutaminase domain protein; PFAM: Transglutaminase-like superfamily; Bacterial transglutaminase-like N-terminal region; transglutaminase domain-containing protein complement(3305602..3306570) Isosphaera pallida ATCC 43644 10156400 YP_004179393.1 CDS Isop_2266 NC_014962.1 3306632 3307588 R COGs: COG2307 conserved hypothetical protein; InterPro IPR007296; KEGG: rca:Rcas_3760 hypothetical protein; PFAM: protein of unknown function DUF403; SPTR: Putative uncharacterized protein; PFAM: Bacterial domain of unknown function (DUF403); hypothetical protein complement(3306632..3307588) Isosphaera pallida ATCC 43644 10156401 YP_004179394.1 CDS Isop_2267 NC_014962.1 3308664 3310190 R COGs: COG2308 conserved hypothetical protein; InterPro IPR016450: IPR007297: IPR007302; KEGG: hau:Haur_3415 hypothetical protein; PFAM: protein of unknown function DUF404; protein of unknown function DUF407; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF407); Domain of unknown function (DUF404); hypothetical protein complement(3308664..3310190) Isosphaera pallida ATCC 43644 10156402 YP_004179395.1 CDS Isop_2268 NC_014962.1 3310526 3313276 D KEGG: amc:MADE_02276 vcbs repeat-containing protein; SPTR: Putative uncharacterized protein; hypothetical protein 3310526..3313276 Isosphaera pallida ATCC 43644 10156403 YP_004179396.1 CDS Isop_2269 NC_014962.1 3313498 3313905 D KEGG: cmi:CMM_2338 putative SAM-dependant methyltransferase; SPTR: Putative SAM-dependant methyltransferase; hypothetical protein 3313498..3313905 Isosphaera pallida ATCC 43644 10156404 YP_004179397.1 CDS Isop_2270 NC_014962.1 3314133 3314996 D KEGG: bta:518970 SH3 and multiple ankyrin repeat domains 1; SPTR: Putative uncharacterized protein Shank1; hypothetical protein 3314133..3314996 Isosphaera pallida ATCC 43644 10156405 YP_004179398.1 CDS Isop_2271 NC_014962.1 3315389 3315820 D KEGG: plm:Plim_1926 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3315389..3315820 Isosphaera pallida ATCC 43644 10156406 YP_004179399.1 CDS Isop_2272 NC_014962.1 3316214 3317143 D COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR008089: IPR001509; KEGG: rmr:Rmar_1858 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family; NAD-dependent epimerase/dehydratase 3316214..3317143 Isosphaera pallida ATCC 43644 10156407 YP_004179400.1 CDS Isop_2273 NC_014962.1 3317235 3318644 D COGs: COG0285 Folylpolyglutamate synthase; InterPro IPR018109: IPR001645: IPR013221: IPR004101; KEGG: sti:Sthe_3030 FolC bifunctional protein; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; PRIAM: Tetrahydrofolate synthase; SPTR: FolC bifunctional protein; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 3317235..3318644 Isosphaera pallida ATCC 43644 10156408 YP_004179401.1 CDS Isop_2274 NC_014962.1 3318838 3319341 D COGs: COG2363 Uncharacterized small membrane protein; InterPro IPR006696; KEGG: bpf:BpOF4_07255 hypothetical protein; PFAM: protein of unknown function DUF423; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF423); hypothetical protein 3318838..3319341 Isosphaera pallida ATCC 43644 10156409 YP_004179402.1 CDS Isop_2275 NC_014962.1 3319401 3322427 R InterPro IPR001623; KEGG: tcu:Tcur_1396 fibronectin type III domain protein; PFAM: heat shock protein DnaJ domain protein; SPTR: Fibronectin type III domain protein; heat shock protein DnaJ domain-containing protein complement(3319401..3322427) Isosphaera pallida ATCC 43644 10156410 YP_004179403.1 CDS Isop_2276 NC_014962.1 3322602 3323552 R COGs: COG0761 Penicillin tolerance protein; InterPro IPR003451; KEGG: psl:Psta_0598 hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; PRIAM: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SPTR: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; manually curated; PFAM: LytB protein; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming); 4-hydroxy-3-methylbut-2-enyl diphosphate reductase complement(3322602..3323552) Isosphaera pallida ATCC 43644 10156411 YP_004179404.1 CDS Isop_2277 NC_014962.1 3323732 3324709 R COGs: COG0223 Methionyl-tRNA formyltransferase; InterPro IPR005794: IPR002376: IPR005793; KEGG: gtn:GTNG_1025 methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; SPTR: Methionyl-tRNA formyltransferase; TIGRFAM: methionyl-tRNA formyltransferase; PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase complement(3323732..3324709) Isosphaera pallida ATCC 43644 10156412 YP_004179405.1 CDS Isop_2278 NC_014962.1 3324768 3325370 R COGs: COG0242 N-formylmethionyl-tRNA deformylase; InterPro IPR000181; KEGG: plm:Plim_0246 peptide deformylase; PFAM: formylmethionine deformylase; SPTR: Peptide deformylase; TIGRFAM: peptide deformylase; PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase; peptide deformylase complement(3324768..3325370) Isosphaera pallida ATCC 43644 10156413 YP_004179406.1 CDS Isop_2279 NC_014962.1 3325590 3326693 R KEGG: rba:RB12630 signal peptide; SPTR: Putative uncharacterized protein; hypothetical protein complement(3325590..3326693) Isosphaera pallida ATCC 43644 10156414 YP_004179407.1 CDS Isop_2280 NC_014962.1 3326988 3329828 D COGs: COG0495 Leucyl-tRNA synthetase; InterProIPR001412: IPR002302: IPR015413: IPR002300: IPR 013155; KEGG: plm:Plim_3733 leucyl-tRNA synthetase; PFAM: tRNA synthetase valyl/leucyl anticodon-binding; aminoacyl-tRNA synthetase class Ia; tRNA synthetase class I (M); SPTR: Putative leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase; PFAM: tRNA synthetases class I (I, L, M and V); tRNA synthetases class I (M); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family; leucyl-tRNA synthetase 3326988..3329828 Isosphaera pallida ATCC 43644 10156415 YP_004179408.1 CDS Isop_2281 NC_014962.1 3330166 3331635 R InterPro IPR007055; KEGG: plm:Plim_3429 transport-associated protein; PFAM: transport-associated; SPTR: Transport-associated protein; PFAM: Putative phospholipid-binding domain; transport-associated protein complement(3330166..3331635) Isosphaera pallida ATCC 43644 10156416 YP_004179409.1 CDS Isop_2282 NC_014962.1 3331968 3332273 D KEGG: aas:Aasi_1452 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3331968..3332273 Isosphaera pallida ATCC 43644 10156417 YP_004179410.1 CDS Isop_2283 NC_014962.1 3332553 3333356 R COGs: COG0775 Nucleoside phosphorylase; InterPro IPR000845; KEGG: psl:Psta_1736 purine or other phosphorylase family 1; PFAM: purine or other phosphorylase family 1; SPTR: Purine or other phosphorylase family 1; PFAM: Phosphorylase superfamily; purine phosphorylase family protein complement(3332553..3333356) Isosphaera pallida ATCC 43644 10156418 YP_004179411.1 CDS Isop_2284 NC_014962.1 3333434 3334447 R COGs: COG0535 Fe-S oxidoreductase; InterPro IPR017833: IPR007197; KEGG: ppd:Ppro_1192 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SPTR: Molybdenum cofactor biosynthesis protein A; TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: Radical SAM superfamily; Domain of unknown function (DUF3463); TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnH; hopanoid biosynthesis associated radical SAM protein HpnH complement(3333434..3334447) Isosphaera pallida ATCC 43644 10156419 YP_004179412.1 CDS Isop_2285 NC_014962.1 3334543 3336528 R COGs: COG1657 Squalene cyclase; InterPro IPR006400: IPR018333: IPR001330; KEGG: psl:Psta_1738 squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase; PRIAM: Squalene--hopene cyclase; SPTR: Squalene-hopene cyclase; TIGRFAM: squalene-hopene cyclase; squalene/oxidosqualene cyclase; PFAM: Prenyltransferase and squalene oxidase repeat; TIGRFAM: squalene/oxidosqualene cyclases; squalene-hopene cyclase; squalene-hopene cyclase complement(3334543..3336528) Isosphaera pallida ATCC 43644 10156420 YP_004179413.1 CDS Isop_2286 NC_014962.1 3337466 3338851 D COGs: COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain); InterPro IPR000644: IPR006669: IPR006668: IPR006667; KEGG: dal:Dalk_4723 magnesium transporter; PFAM: MgtE integral membrane region; MgtE intracellular region; CBS domain containing protein; SPTR: Magnesium transporter; TIGRFAM: magnesium transporter; PFAM: MgtE intracellular N domain; Divalent cation transporter; CBS domain; TIGRFAM: Mg2+ transporter (mgtE); magnesium transporter 3337466..3338851 Isosphaera pallida ATCC 43644 10156421 YP_004179414.1 CDS Isop_2287 NC_014962.1 3339052 3340125 D InterPro IPR006311; KEGG: rba:RB2096 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3500); TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; hypothetical protein 3339052..3340125 Isosphaera pallida ATCC 43644 10156422 YP_004179415.1 CDS Isop_2288 NC_014962.1 3340209 3341462 D InterPro IPR001258; KEGG: sus:Acid_1144 NHL repeat-containing protein; PFAM: NHL repeat containing protein; SPTR: Serine/threonine protein kinase; PFAM: NHL repeat; NHL repeat containing protein 3340209..3341462 Isosphaera pallida ATCC 43644 10156423 YP_004179416.1 CDS Isop_2289 NC_014962.1 3341513 3342064 D KEGG: dma:DMR_08260 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3341513..3342064 Isosphaera pallida ATCC 43644 10156424 YP_004179417.1 CDS Isop_2290 NC_014962.1 3342182 3344206 D KEGG: psl:Psta_2852 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3342182..3344206 Isosphaera pallida ATCC 43644 10156425 YP_004179418.1 CDS Isop_2291 NC_014962.1 3344398 3344586 R KEGG: ara:Arad_3044 amino acid transporter protein; SPTR: Amino acid transporter protein; amino acid transporter protein complement(3344398..3344586) Isosphaera pallida ATCC 43644 10156426 YP_004179419.1 CDS Isop_2292 NC_014962.1 3344994 3347198 R COGs: COG1505 Serine protease of the peptidase family S9A; InterPro IPR002471: IPR002470: IPR004106; KEGG: npu:Npun_F5151 peptidase S9 prolyl oligopeptidase; PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller; PRIAM: Prolyl oligopeptidase; SPTR: Peptidase, S9A (Prolyl oligopeptidase) family, N-terminal beta-propeller domain protein; PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase family; prolyl oligopeptidase complement(3344994..3347198) Isosphaera pallida ATCC 43644 10156427 YP_004179420.1 CDS Isop_2293 NC_014962.1 3347628 3348677 D COGs: COG0031 Cysteine synthase; InterPro IPR005856: IPR005859: IPR001926; KEGG: psl:Psta_1771 cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Cysteine synthase A; TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases; cysteine synthase 3347628..3348677 Isosphaera pallida ATCC 43644 10156428 YP_004179421.1 CDS Isop_2294 NC_014962.1 3348751 3350295 D InterPro IPR002052: IPR002296; KEGG: rca:Rcas_1074 modification methylase NspV; SPTR: Modification methylase NspV; modification methylase NspV 3348751..3350295 Isosphaera pallida ATCC 43644 10156429 YP_004179422.1 CDS Isop_2295 NC_014962.1 3350500 3351033 D COGs: COG1310 metal-dependent protease of the PAD1/JAB1 superfamily; InterPro IPR000555; KEGG: tjr:TherJR_2271 Mov34/MPN/PAD-1 family protein; PFAM: Mov34/MPN/PAD-1 family protein; SMART: Mov34/MPN/PAD-1 family protein; SPTR: Mov34/MPN/PAD-1 family protein; PFAM: Mov34/MPN/PAD-1 family; Mov34/MPN/PAD-1 family protein 3350500..3351033 Isosphaera pallida ATCC 43644 10156430 YP_004179423.1 CDS Isop_2296 NC_014962.1 3350952 3351716 R COGs: COG0563 Adenylate kinase and related kinase; InterPro IPR000850; KEGG: plm:Plim_0733 adenylate kinase; PFAM: adenylate kinase; SPTR: Adenylate kinase; PFAM: Adenylate kinase; adenylate kinase complement(3350952..3351716) Isosphaera pallida ATCC 43644 10156431 YP_004179424.1 CDS Isop_2297 NC_014962.1 3351991 3352776 D COGs: COG0406 Fructose-2 6-bisphosphatase; InterPro IPR013078; KEGG: stp:Strop_3355 phosphoglycerate mutase; PFAM: Phosphoglycerate mutase; SPTR: Phosphoglycerate mutase; PFAM: Phosphoglycerate mutase family; phosphoglycerate mutase 3351991..3352776 Isosphaera pallida ATCC 43644 10156432 YP_004179425.1 CDS Isop_2298 NC_014962.1 3352864 3352965 R hypothetical protein complement(3352864..3352965) Isosphaera pallida ATCC 43644 10156433 YP_004179426.1 CDS Isop_2299 NC_014962.1 3353078 3354403 D COGs: COG1301 Na+/H+-dicarboxylate symporter; InterPro IPR001991; KEGG: gau:GAU_2005 glutamate-aspartate carrier protein; PFAM: sodium:dicarboxylate symporter; SPTR: Glutamate-aspartate carrier protein; PFAM: Sodium:dicarboxylate symporter family; sodium:dicarboxylate symporter 3353078..3354403 Isosphaera pallida ATCC 43644 10156434 YP_004179427.1 CDS Isop_2300 NC_014962.1 3354839 3356740 D COGs: COG0621 2-methylthioadenine synthetase; InterProIPR006638: IPR020612: IPR005839: IPR006463: IPR 013848: IPR007197: IPR002792; KEGG: plm:Plim_1655 RNA modification enzyme, MiaB family; PFAM: protein of unknown function UPF0004; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Probable MiaB protein-putative tRNA-thiotransferase; TIGRFAM: RNA modification enzyme, MiaB family; tRNA-i(6)A37 thiotransferase enzyme MiaB; PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; RNA modification enzyme, MiaB family; MiaB family RNA modification protein 3354839..3356740 Isosphaera pallida ATCC 43644 10156435 YP_004179428.1 CDS Isop_2301 NC_014962.1 3356737 3357648 D KEGG: sro:Sros_2633 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3356737..3357648 Isosphaera pallida ATCC 43644 10156436 YP_004179429.1 CDS Isop_2302 NC_014962.1 3357827 3361135 D COGs: COG1391 Glutamine synthetase adenylyltransferase; InterPro IPR021158: IPR005190: IPR013546; KEGG: psl:Psta_3571 (glutamate--ammonia-ligase) adenylyltransferase; PFAM: glutamate-ammonia ligase adenylyltransferase; GlnD PII-uridylyltransferase; PRIAM: [Glutamate--ammonia-ligase] adenylyltransferase; SPTR: Glutamate-ammonia-ligase adenylyltransferase; PFAM: GlnD PII-uridylyltransferase; Glutamate-ammonia ligase adenylyltransferase; (glutamate--ammonia-ligase) adenylyltransferase 3357827..3361135 Isosphaera pallida ATCC 43644 10156437 YP_004179430.1 CDS Isop_2303 NC_014962.1 3361364 3363361 D COGs: COG2234 aminopeptidase; InterPro IPR001478: IPR017441: IPR003137: IPR007484; KEGG: psl:Psta_3192 peptidase M28; PFAM: peptidase M28; protease-associated PA domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: Probable aminopeptidase; PFAM: PA domain; PDZ domain (Also known as DHR or GLGF); Peptidase family M28; peptidase M28 3361364..3363361 Isosphaera pallida ATCC 43644 10156438 YP_004179431.1 CDS Isop_2304 NC_014962.1 3363788 3365299 D InterPro IPR014338; KEGG: hau:Haur_4051 hypothetical protein; SPTR: Leucine-rich repeat-containing protein typical subtype; TIGRFAM: repeat-companion domain protein; TIGRFAM: repeat-companion domain TIGR02996; repeat-companion domain-containing protein 3363788..3365299 Isosphaera pallida ATCC 43644 10156439 YP_004179432.1 CDS Isop_2305 NC_014962.1 3365359 3366210 R InterPro IPR013217; KEGG: mem:Memar_0201 methyltransferase type 12; PFAM: Methyltransferase type 12; SPTR: Putative uncharacterized protein; type 12 methyltransferase complement(3365359..3366210) Isosphaera pallida ATCC 43644 10156440 YP_004179433.1 CDS Isop_2306 NC_014962.1 3366496 3367545 R InterPro IPR018062: IPR001120: IPR012902; KEGG: plm:Plim_1767 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein complement(3366496..3367545) Isosphaera pallida ATCC 43644 10156441 YP_004179434.1 CDS Isop_2307 NC_014962.1 3367743 3367964 R KEGG: azo:azo3956 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3367743..3367964) Isosphaera pallida ATCC 43644 10156442 YP_004179435.1 CDS Isop_2308 NC_014962.1 3367961 3368353 R KEGG: dra:DR_0458 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3367961..3368353) Isosphaera pallida ATCC 43644 10156443 YP_004179436.1 CDS Isop_2309 NC_014962.1 3368986 3369993 D COGs: COG3481 HD-superfamily hydrolase; InterPro IPR003607: IPR006675: IPR004365: IPR006674; KEGG: plm:Plim_2466 metal-dependent phosphohydrolase HD sub domain protein; PFAM: metal-dependent phosphohydrolase HD sub domain; nucleic acid binding OB-fold tRNA/helicase-type; SMART: metal-dependent phosphohydrolase HD region; SPTR: CMP-binding protein; TIGRFAM: metal dependent phophohydrolase; PFAM: HD domain; OB-fold nucleic acid binding domain; TIGRFAM: uncharacterized domain HDIG; metal dependent phosphohydrolase 3368986..3369993 Isosphaera pallida ATCC 43644 10156444 YP_004179437.1 CDS Isop_2310 NC_014962.1 3370114 3372594 D COGs: COG0557 Exoribonuclease R; InterPro IPR004476: IPR013223: IPR001900: IPR003029; KEGG: psl:Psta_4682 ribonuclease R; PFAM: ribonuclease II; Ribonuclease B OB region domain; RNA binding S1 domain protein; SPTR: Ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; PFAM: Ribonuclease B OB domain; RNB domain; S1 RNA binding domain; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonucleases; VacB and RNase II family 3'-5' exoribonuclease 3370114..3372594 Isosphaera pallida ATCC 43644 10156445 YP_004179438.1 CDS Isop_2311 NC_014962.1 3373006 3374673 D COGs: COG2931 RTX toxins and related Ca2+-binding protein; InterPro IPR018511: IPR018512: IPR001343; KEGG: swp:swp_1383 hemolysin-type calcium-binding region; PFAM: Hemolysin-type calcium-binding region; SPTR: Hemolysin-type calcium-binding region; PFAM: Hemolysin-type calcium-binding repeat (2 copies); hemolysin-type calcium-binding protein 3373006..3374673 Isosphaera pallida ATCC 43644 10156446 YP_004179439.1 CDS Isop_2312 NC_014962.1 3374762 3375445 R KEGG: sbi:SORBI_10g021900 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3374762..3375445) Isosphaera pallida ATCC 43644 10156447 YP_004179440.1 CDS Isop_2313 NC_014962.1 3375955 3376416 D InterPro IPR013229; KEGG: plm:Plim_2448 PEGA domain protein; PFAM: PEGA domain protein; SPTR: PEGA domain protein; PFAM: PEGA domain; PEGA domain-containing protein 3375955..3376416 Isosphaera pallida ATCC 43644 10156448 YP_004179441.1 CDS Isop_2314 NC_014962.1 3376688 3377545 D COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: rci:RCIX762 putative amidohydrolase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: MelJ protein; PFAM: Carbon-nitrogen hydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 3376688..3377545 Isosphaera pallida ATCC 43644 10156449 YP_004179442.1 CDS Isop_2315 NC_014962.1 3377488 3377616 D KEGG: cci:CC1G_06487 hypothetical protein; hypothetical protein 3377488..3377616 Isosphaera pallida ATCC 43644 10156450 YP_004179443.1 CDS Isop_2316 NC_014962.1 3377990 3379975 D COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing); InterPro IPR006426: IPR000583: IPR001962: IPR017932; KEGG: scl:sce2064 asparagine synthetase; PFAM: asparagine synthase; glutamine amidotransferase class-II; PRIAM: Asparagine synthase (glutamine-hydrolyzing); SPTR: Asparagine synthetase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); asparagine synthase 3377990..3379975 Isosphaera pallida ATCC 43644 10156451 YP_004179444.1 CDS Isop_2317 NC_014962.1 3380026 3380829 R KEGG: rmr:Rmar_0763 flagellar biosynthetic protein FliR; SPTR: Flagellar biosynthetic protein fliR; PFAM: Bacterial export proteins, family 1; flagellar biosynthetic protein FliR complement(3380026..3380829) Isosphaera pallida ATCC 43644 10156452 YP_004179445.1 CDS Isop_2318 NC_014962.1 3380930 3381199 R InterPro IPR002191; KEGG: hha:Hhal_0483 flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; SPTR: Probable flagellar biosynthetic protein fliQ; PFAM: Bacterial export proteins, family 3; export protein FliQ family 3 complement(3380930..3381199) Isosphaera pallida ATCC 43644 10156453 YP_004179446.1 CDS Isop_2319 NC_014962.1 3381282 3382025 R COGs: COG1338 Flagellar biosynthesis pathway component FliP; InterPro IPR005838; KEGG: adg:Adeg_2033 flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein; SPTR: Flagellar biosynthetic protein FliP; PFAM: FliP family; type III secretion system inner membrane P protein complement(3381282..3382025) Isosphaera pallida ATCC 43644 10156454 YP_004179447.1 CDS Isop_2320 NC_014962.1 3382025 3382624 R KEGG: ske:Sked_02910 HNH endonuclease; SPTR: HNH endonuclease; hypothetical protein complement(3382025..3382624) Isosphaera pallida ATCC 43644 10156455 YP_004179448.1 CDS Isop_2321 NC_014962.1 3382621 3383172 R InterPro IPR000090; KEGG: aeh:Mlg_0710 flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; SPTR: Flagellar motor switch protein fliG; PFAM: FliG C-terminal domain; flagellar motor switch protein FliG complement(3382621..3383172) Isosphaera pallida ATCC 43644 10156456 YP_004179449.1 CDS Isop_2322 NC_014962.1 3383179 3385002 R KEGG: bfa:Bfae_21550 FHA domain-containing protein; SPTR: FHA domain-containing protein; hypothetical protein complement(3383179..3385002) Isosphaera pallida ATCC 43644 10156457 YP_004179450.1 CDS Isop_2323 NC_014962.1 3385595 3385954 D KEGG: bfa:Bfae_02760 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3385595..3385954 Isosphaera pallida ATCC 43644 10156458 YP_004179451.1 CDS Isop_2324 NC_014962.1 3386172 3386645 R COGs: COG0782 Transcription elongation factor; InterPro IPR006359: IPR001437; KEGG: rba:RB2780 transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain-containing protein; SPTR: Transcription elongation factor greA; TIGRFAM: transcription elongation factor GreA; PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA; transcription elongation factor GreA complement(3386172..3386645) Isosphaera pallida ATCC 43644 10156459 YP_004179452.1 CDS Isop_2325 NC_014962.1 3387202 3387513 D KEGG: nde:NIDE0216 putative filamentous haemagglutinin; SPTR: Nucleoporin, putative (Serine peptidase, clan sp, family s59, putative); hypothetical protein 3387202..3387513 Isosphaera pallida ATCC 43644 10156460 YP_004179453.1 CDS Isop_2326 NC_014962.1 3387456 3388736 R COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: plm:Plim_0127 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Probable ATP-binding/permease fusion ABC transporter; PFAM: Predicted permease; hypothetical protein complement(3387456..3388736) Isosphaera pallida ATCC 43644 10156461 YP_004179454.1 CDS Isop_2327 NC_014962.1 3389007 3389843 R COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593: IPR017871: IPR003439; KEGG: psl:Psta_4732 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter; ABC transporter-like protein complement(3389007..3389843) Isosphaera pallida ATCC 43644 10156462 YP_004179455.1 CDS Isop_2328 NC_014962.1 3389840 3391711 R COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: psl:Psta_4731 efflux transporter, RND family, MFP subunit; SPTR: Putative uncharacterized protein; TIGRFAM: efflux transporter, RND family, MFP subunit; TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter MFP subunit complement(3389840..3391711) Isosphaera pallida ATCC 43644 10156463 YP_004179456.1 CDS Isop_2329 NC_014962.1 3391683 3395117 R KEGG: psl:Psta_4730 hypothetical protein; SPTR: Outer membrane protein-like protein; hypothetical protein complement(3391683..3395117) Isosphaera pallida ATCC 43644 10156464 YP_004179457.1 CDS Isop_2330 NC_014962.1 3396000 3398411 D InterPro IPR013519: IPR013517; KEGG: noc:Noc_2093 integrins alpha chain; PFAM: FG-GAP repeat protein; SMART: Integrin alpha beta-propellor repeat protein; SPTR: Integrins alpha chain; FG-GAP repeat-containing protein 3396000..3398411 Isosphaera pallida ATCC 43644 10156465 YP_004179458.1 CDS Isop_2331 NC_014962.1 3398641 3400110 R COGs: COG0144 tRNA and rRNA cytosine-C5-methylase; InterPro IPR001678; KEGG: shw:Sputw3181_2798 Fmu (Sun) domain-containing protein; PFAM: Fmu (Sun) domain protein; SPTR: NOL1/NOP2/sun family putative RNA methylase; PFAM: NOL1/NOP2/sun family; Fmu (Sun) domain-containing protein complement(3398641..3400110) Isosphaera pallida ATCC 43644 10156466 YP_004179459.1 CDS Isop_2332 NC_014962.1 3400236 3401693 R KEGG: psl:Psta_1770 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Neutral/alkaline non-lysosomal ceramidase; hypothetical protein complement(3400236..3401693) Isosphaera pallida ATCC 43644 10156467 YP_004179460.1 CDS Isop_2333 NC_014962.1 3401762 3404503 R COGs: COG0612 Zn-dependent peptidase; InterPro IPR001431: IPR011765: IPR007863; KEGG: tro:trd_A0561 peptidase M16 domain protein; PFAM: peptidase M16 domain protein; SPTR: Peptidase M16-like; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); peptidase M16 domain-containing protein complement(3401762..3404503) Isosphaera pallida ATCC 43644 10156468 YP_004179461.1 CDS Isop_2334 NC_014962.1 3405183 3405509 D KEGG: cwo:Cwoe_1217 transcriptional regulator, GntR family with aminotransferase domain; SPTR: Transcriptional regulator, GntR family with aminotransferase domain; hypothetical protein 3405183..3405509 Isosphaera pallida ATCC 43644 10156469 YP_004179462.1 CDS Isop_2335 NC_014962.1 3405844 3407241 D COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: kra:Krad_1062 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase 3405844..3407241 Isosphaera pallida ATCC 43644 10156470 YP_004179463.1 CDS Isop_2336 NC_014962.1 3407244 3408677 D InterPro IPR002656; KEGG: bja:bll7034 MDO-like protein; PFAM: acyltransferase 3; SPTR: MDO-like protein; PFAM: Acyltransferase family; acyltransferase 3 3407244..3408677 Isosphaera pallida ATCC 43644 10156471 YP_004179464.1 CDS Isop_2337 NC_014962.1 3409170 3410360 R COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: psl:Psta_3890 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; Oxidoreductase domain; SPTR: Probable NADH-dependent dyhydrogenase related protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain; oxidoreductase domain-containing protein complement(3409170..3410360) Isosphaera pallida ATCC 43644 10156472 YP_004179465.1 CDS Isop_2338 NC_014962.1 3410477 3413269 R KEGG: ank:AnaeK_3854 tetratricopeptide TPR_2 repeat protein; SPTR: Tetratricopeptide repeat domain protein; hypothetical protein complement(3410477..3413269) Isosphaera pallida ATCC 43644 10156473 YP_004179466.1 CDS Isop_2339 NC_014962.1 3413462 3414826 R KEGG: rba:RB3324 signal peptide; SPTR: Putative uncharacterized protein; hypothetical protein complement(3413462..3414826) Isosphaera pallida ATCC 43644 10156474 YP_004179467.1 CDS Isop_2341 NC_014962.1 3417655 3418311 D COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR000838: IPR014284: IPR007627: IPR013249; KEGG: psl:Psta_4738 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: Probable RNA polymerase sigma factor sigW; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; ECF subfamily RNA polymerase sigma-24 factor 3417655..3418311 Isosphaera pallida ATCC 43644 10156476 YP_004179468.1 CDS Isop_2342 NC_014962.1 3418391 3419119 D KEGG: hmg:100202799 hypothetical protein LOC100202799; SPTR: Putative uncharacterized protein; hypothetical protein 3418391..3419119 Isosphaera pallida ATCC 43644 10156477 YP_004179469.1 CDS Isop_2343 NC_014962.1 3419116 3420039 D KEGG: sna:Snas_5781 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3419116..3420039 Isosphaera pallida ATCC 43644 10156478 YP_004179470.1 CDS Isop_2344 NC_014962.1 3420039 3422021 D KEGG: rsc:RCFBP_20244 putative helicase, C_term RecB family exonuclease; SPTR: Putative uncharacterized protein; hypothetical protein 3420039..3422021 Isosphaera pallida ATCC 43644 10156479 YP_004179471.1 CDS Isop_2345 NC_014962.1 3422654 3424075 D COGs: COG0160 4-aminobutyrate aminotransferase and related aminotransferase; InterPro IPR005814: IPR004636; KEGG: cyc:PCC7424_4452 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; PRIAM: Acetylornithine transaminase; SPTR: Acetylornithine transaminase; TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: Aminotransferase class-III; TIGRFAM: 4-aminobutyrate aminotransferase, prokaryotic type; acetylornithine and succinylornithine aminotransferases; 4-aminobutyrate aminotransferase 3422654..3424075 Isosphaera pallida ATCC 43644 10156480 YP_004179472.1 CDS Isop_2346 NC_014962.1 3424072 3425526 D KEGG: wch:wcw_0825 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3424072..3425526 Isosphaera pallida ATCC 43644 10156481 YP_004179473.1 CDS Isop_2347 NC_014962.1 3426015 3427514 D COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: plm:Plim_2239 protein of unknown function DUF58; PFAM: protein of unknown function DUF58; SPTR: Probable membrane protein; PFAM: Protein of unknown function DUF58; hypothetical protein 3426015..3427514 Isosphaera pallida ATCC 43644 10156482 YP_004179474.1 CDS Isop_2348 NC_014962.1 3427547 3430285 D COGs: COG1305 Transglutaminase-like protein; InterPro IPR002931; KEGG: plm:Plim_2238 transglutaminase domain protein; PFAM: transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein; SPTR: Transglutaminase domain protein; PFAM: Transglutaminase-like superfamily; transglutaminase domain-containing protein 3427547..3430285 Isosphaera pallida ATCC 43644 10156483 YP_004179475.1 CDS Isop_2349 NC_014962.1 3430375 3431406 D COGs: COG0714 MoxR-like ATPase; InterPro IPR003593: IPR016366: IPR011703; KEGG: psl:Psta_3996 ATPase associated with various cellular activities AAA_3; PFAM: ATPase associated with various cellular activities AAA_3; SMART: AAA ATPase; SPTR: ATPase associated with various cellular activities AAA_3; PFAM: ATPase family associated with various cellular activities (AAA); ATPase 3430375..3431406 Isosphaera pallida ATCC 43644 10156484 YP_004179476.1 CDS Isop_2350 NC_014962.1 3431603 3432322 R COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: maq:Maqu_0100 multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Multi-sensor hybrid histidine kinase; PFAM: Response regulator receiver domain; response regulator receiver protein complement(3431603..3432322) Isosphaera pallida ATCC 43644 10156485 YP_004179477.1 CDS Isop_2351 NC_014962.1 3432731 3434356 D InterPro IPR004155; KEGG: plm:Plim_1500 hypothetical protein; PFAM: PBS lyase HEAT domain protein repeat-containing protein; SMART: PBS lyase HEAT domain protein repeat-containing protein; SPTR: Cell division protein FtsK, putative; PBS lyase HEAT domain-containing protein 3432731..3434356 Isosphaera pallida ATCC 43644 10156486 YP_004179478.1 CDS Isop_2352 NC_014962.1 3434541 3435104 D KEGG: bts:Btus_0261 protein of unknown function DUF58; SPTR: Putative uncharacterized protein; hypothetical protein 3434541..3435104 Isosphaera pallida ATCC 43644 10156487 YP_004179479.1 CDS Isop_2353 NC_014962.1 3435101 3437056 D COGs: COG0608 Single-stranded DNA-specific exonuclease; InterPro IPR004610: IPR001667: IPR003156; KEGG: psl:Psta_2157 single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SPTR: Single-strand DNA-specific exonuclease; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: DHHA1 domain; DHH family; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; single-stranded-DNA-specific exonuclease RecJ 3435101..3437056 Isosphaera pallida ATCC 43644 10156488 YP_004179480.1 CDS Isop_2354 NC_014962.1 3437053 3437532 D KEGG: psl:Psta_1891 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3437053..3437532 Isosphaera pallida ATCC 43644 10156489 YP_004179481.1 CDS Isop_2355 NC_014962.1 3437567 3438643 R KEGG: rmr:Rmar_2792 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1083); hypothetical protein complement(3437567..3438643) Isosphaera pallida ATCC 43644 10156490 YP_004179482.1 CDS Isop_2356 NC_014962.1 3438876 3439850 D KEGG: rcu:RCOM_1609340 structural constituent of nuclear pore, putative; SPTR: Type I secretion target repeat protein; hypothetical protein 3438876..3439850 Isosphaera pallida ATCC 43644 10156491 YP_004179483.1 CDS Isop_2357 NC_014962.1 3440826 3442067 D COGs: COG0448 ADP-glucose pyrophosphorylase; InterPro IPR005836: IPR011831: IPR005835; KEGG: plm:Plim_1691 glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; SPTR: Glucose-1-phosphate adenylyltransferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; glucose-1-phosphate adenylyltransferase 3440826..3442067 Isosphaera pallida ATCC 43644 10156492 YP_004179484.1 CDS Isop_2358 NC_014962.1 3442261 3442575 D COGs: COG0724 RNA-binding protein (RRM domain); InterPro IPR000504; KEGG: plm:Plim_1587 RNP-1 like RNA-binding protein; PFAM: RNP-1 like RNA-binding protein; SMART: RNP-1 like RNA-binding protein; SPTR: RNP-1 like RNA-binding protein; PFAM: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); RNP-1 like RNA-binding protein 3442261..3442575 Isosphaera pallida ATCC 43644 10156493 YP_004179485.1 CDS Isop_2359 NC_014962.1 3442797 3444515 R COGs: COG0515 Serine/threonine protein kinase; InterProIPR020635: IPR002290: IPR017441: IPR008271: IPR 017442: IPR000719; KEGG: psl:Psta_4044 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Probable serine/threonine protein kinase; PFAM: Protein kinase domain; serine/threonine protein kinase complement(3442797..3444515) Isosphaera pallida ATCC 43644 10156494 YP_004179486.1 CDS Isop_2360 NC_014962.1 3444705 3445811 R COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123: IPR018221; KEGG: plm:Plim_2369 AMP-dependent synthetase and ligase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: AMP-dependent synthetase and ligase; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; phospholipid/glycerol acyltransferase complement(3444705..3445811) Isosphaera pallida ATCC 43644 10156495 YP_004179487.1 CDS Isop_2361 NC_014962.1 3445808 3447085 R InterPro IPR011701; KEGG: vei:Veis_2436 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Probable transport transmembrane protein; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein complement(3445808..3447085) Isosphaera pallida ATCC 43644 10156496 YP_004179488.1 CDS Isop_2362 NC_014962.1 3447436 3447903 R COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: tye:THEYE_A1927 heat shock protein, HSP20 family; PFAM: heat shock protein Hsp20; SPTR: Heat shock protein, Hsp20 family; PFAM: Hsp20/alpha crystallin family; heat shock protein Hsp20 complement(3447436..3447903) Isosphaera pallida ATCC 43644 10156497 YP_004179489.1 CDS Isop_2363 NC_014962.1 3448244 3449059 R InterPro IPR008538; KEGG: mar:MAE_05220 hypothetical protein; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF820); hypothetical protein complement(3448244..3449059) Isosphaera pallida ATCC 43644 10156498 YP_004179490.1 CDS Isop_2364 NC_014962.1 3449130 3450014 R InterPro IPR008538; KEGG: cyh:Cyan8802_0022 protein of unknown function DUF820; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF820); hypothetical protein complement(3449130..3450014) Isosphaera pallida ATCC 43644 10156499 YP_004179491.1 CDS Isop_2365 NC_014962.1 3450085 3450879 R InterPro IPR008538; KEGG: mar:MAE_05220 hypothetical protein; PFAM: protein of unknown function DUF820; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF820); hypothetical protein complement(3450085..3450879) Isosphaera pallida ATCC 43644 10156500 YP_004179492.1 CDS Isop_2366 NC_014962.1 3450943 3452637 R InterPro IPR011031; KEGG: psl:Psta_4660 5'-nucleotidase/2' 3'-cyclic phosphodiesterase esterase-like protein; SPTR: 5'-nucleotidase/2' 3'-cyclic phosphodiesterase esterase-like protein; 5'-nucleotidase complement(3450943..3452637) Isosphaera pallida ATCC 43644 10156501 YP_004179493.1 CDS Isop_2367 NC_014962.1 3452937 3454112 R InterPro IPR011467; KEGG: psl:Psta_1338 protein of unknown function DUF1573; PFAM: protein of unknown function DUF1573; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1573); hypothetical protein complement(3452937..3454112) Isosphaera pallida ATCC 43644 10156502 YP_004179494.1 CDS Isop_2368 NC_014962.1 3454618 3454920 D InterPro IPR001075; KEGG: dal:Dalk_0569 nitrogen-fixing NifU domain protein; PFAM: nitrogen-fixing NifU domain protein; SPTR: Nitrogen-fixing NifU domain protein; PFAM: NifU-like domain; nitrogen-fixing NifU domain-containing protein 3454618..3454920 Isosphaera pallida ATCC 43644 10156503 YP_004179495.1 CDS Isop_2369 NC_014962.1 3455038 3456225 D COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterPro IPR006638: IPR004559: IPR007197: IPR010723; KEGG: psl:Psta_0038 oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase; oxygen-independent coproporphyrinogen III oxidase 3455038..3456225 Isosphaera pallida ATCC 43644 10156504 YP_004179496.1 CDS Isop_2370 NC_014962.1 3456809 3457183 R InterPro IPR020476: IPR000086; KEGG: psl:Psta_2454 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: NUDIX hydrolase; PFAM: NUDIX domain; TIGRFAM: mutator mutT protein; NUDIX hydrolase complement(3456809..3457183) Isosphaera pallida ATCC 43644 10156505 YP_004179497.1 CDS Isop_2371 NC_014962.1 3457309 3457488 D hypothetical protein 3457309..3457488 Isosphaera pallida ATCC 43644 10156506 YP_004179498.1 CDS Isop_2372 NC_014962.1 3457429 3458253 R COGs: COG0623 Enoyl-(acyl-carrier-protein); InterPro IPR002347; KEGG: plm:Plim_3893 short-chain dehydrogenase/reductase SDR; SPTR: Enoyl-[acyl-carrier-protein] reductase (NADH); PFAM: short chain dehydrogenase; Enoyl-(acyl-carrier-protein) reductase (NADH) complement(3457429..3458253) Isosphaera pallida ATCC 43644 10156507 YP_004179499.1 CDS Isop_2373 NC_014962.1 3458481 3459275 R InterPro IPR013424: IPR011449; KEGG: rcu:RCOM_0136370 hypothetical protein; PFAM: protein of unknown function DUF1555; SPTR: Putative uncharacterized protein; TIGRFAM: PEP-CTERM putative exosortase interaction domain; hypothetical protein complement(3458481..3459275) Isosphaera pallida ATCC 43644 10156508 YP_004179500.1 CDS Isop_2374 NC_014962.1 3459272 3459418 R hypothetical protein complement(3459272..3459418) Isosphaera pallida ATCC 43644 10156509 YP_004179501.1 CDS Isop_2375 NC_014962.1 3459478 3460743 R InterPro IPR018247: IPR018242; KEGG: aba:Acid345_4018 integrin-like protein; PFAM: Dockerin type 1; SPTR: Integrin-like protein; PFAM: Dockerin type I repeat; Dockerin type 1 complement(3459478..3460743) Isosphaera pallida ATCC 43644 10156510 YP_004179502.1 CDS Isop_2376 NC_014962.1 3461194 3462051 D InterPro IPR000253; KEGG: cwo:Cwoe_0012 FHA domain containing protein; PFAM: Forkhead-associated protein; SPTR: FHA domain containing protein; PFAM: FHA domain; forkhead-associated protein 3461194..3462051 Isosphaera pallida ATCC 43644 10156511 YP_004179503.1 CDS Isop_2377 NC_014962.1 3462524 3463747 R KEGG: plm:Plim_0704 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3462524..3463747) Isosphaera pallida ATCC 43644 10156512 YP_004179504.1 CDS Isop_2378 NC_014962.1 3463814 3464668 R COGs: COG1192 ATPase involved in chromosome partitioning; KEGG: psl:Psta_0392 cobyrinic acid ac-diamide synthase; SPTR: Cobyrinic acid ac-diamide synthase; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; cobyrinic acid ac-diamide synthase complement(3463814..3464668) Isosphaera pallida ATCC 43644 10156513 YP_004179505.1 CDS Isop_2379 NC_014962.1 3465100 3466278 R InterPro IPR017937: IPR013740: IPR000866: IPR017936; KEGG: ote:Oter_0137 redoxin domain-containing protein; PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: AhpC/TSA family; redoxin domain-containing protein complement(3465100..3466278) Isosphaera pallida ATCC 43644 10156514 YP_004179506.1 CDS Isop_2380 NC_014962.1 3466721 3471316 D COGs: COG3828 conserved hypothetical protein; InterPro IPR013428: IPR013427: IPR009056; KEGG: psl:Psta_1431 membrane-bound dehydrogenase domain protein; SPTR: Membrane-bound dehydrogenase domain protein; TIGRFAM: membrane-bound dehydrogenase domain protein; heme-binding protein; PFAM: Cytochrome c; Trehalose utilisation; Membrane bound L-sorbosone dehydrogenase; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type; membrane-bound dehydrogenase domain-containing protein 3466721..3471316 Isosphaera pallida ATCC 43644 10156515 YP_004179507.1 CDS Isop_2381 NC_014962.1 3471480 3474056 D InterPro IPR011444: IPR009056; KEGG: plm:Plim_0775 protein of unknown function DUF1549; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553); hypothetical protein 3471480..3474056 Isosphaera pallida ATCC 43644 10156516 YP_004179508.1 CDS Isop_2382 NC_014962.1 3474123 3475625 D InterPro IPR006311: IPR010869: IPR017909; KEGG: rba:RB2170 hypothetical protein; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501); hypothetical protein 3474123..3475625 Isosphaera pallida ATCC 43644 10156517 YP_004179509.1 CDS Isop_2383 NC_014962.1 3475714 3476151 D COGs: COG3651 conserved hypothetical protein; InterPro IPR018714; KEGG: tel:tll1086 hypothetical protein; PFAM: Protein of unknown function DUF2237; SPTR: Tll1086 protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2237); hypothetical protein 3475714..3476151 Isosphaera pallida ATCC 43644 10156518 YP_004179510.1 CDS Isop_2384 NC_014962.1 3476298 3477857 D COGs: COG0364 Glucose-6-phosphate 1-dehydrogenase; InterPro IPR019796: IPR001282; KEGG: cyb:CYB_1985 glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase; PRIAM: Glucose-6-phosphate dehydrogenase; SPTR: Glucose-6-phosphate 1-dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase, NAD binding domain; Glucose-6-phosphate dehydrogenase, C-terminal domain; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; glucose-6-phosphate 1-dehydrogenase 3476298..3477857 Isosphaera pallida ATCC 43644 10156519 YP_004179511.1 CDS Isop_2385 NC_014962.1 3477900 3478436 D COGs: COG0219 rRNA methylase (SpoU class); InterPro IPR016914: IPR001537; KEGG: psl:Psta_0030 tRNA/rRNA methyltransferase (SpoU); PFAM: tRNA/rRNA methyltransferase (SpoU); SPTR: tRNA/rRNA methyltransferase (SpoU); PFAM: SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, putative, group 2; tRNA/rRNA methyltransferase SpoU 3477900..3478436 Isosphaera pallida ATCC 43644 10156520 YP_004179512.1 CDS Isop_2387 NC_014962.1 3479002 3480303 R InterPro IPR002123; KEGG: psl:Psta_3295 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: Phospholipid/glycerol acyltransferase; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; phospholipid/glycerol acyltransferase complement(3479002..3480303) Isosphaera pallida ATCC 43644 10156522 YP_004179513.1 CDS Isop_2388 NC_014962.1 3480315 3483857 R KEGG: psl:Psta_2133 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3480315..3483857) Isosphaera pallida ATCC 43644 10156523 YP_004179514.1 CDS Isop_2389 NC_014962.1 3484016 3485917 R COGs: COG0443 Molecular chaperone; InterPro IPR018181; KEGG: mxa:MXAN_5322 heat shock protein 70 family protein; SPTR: Heat shock protein 70 family protein; PFAM: Hsp70 protein; heat shock protein 70 family protein complement(3484016..3485917) Isosphaera pallida ATCC 43644 10156524 YP_004179515.1 CDS Isop_2390 NC_014962.1 3486020 3486610 R KEGG: xom:XOO_4334 hypothetical protein; SPTR: Putative uncharacterized protein XOO4334; manually curated; hypothetical protein complement(3486020..3486610) Isosphaera pallida ATCC 43644 10156525 YP_004179516.1 CDS Isop_2391 NC_014962.1 3486611 3487840 R COGs: COG4637 ATPase; InterPro IPR014555; KEGG: sat:SYN_00010 ATPase; SPTR: ATPase; ATPase complement(3486611..3487840) Isosphaera pallida ATCC 43644 10156526 YP_004179517.1 CDS Isop_2392 NC_014962.1 3487896 3489269 R COGs: COG3372 conserved hypothetical protein; InterPro IPR008508; KEGG: scl:sce6812 hypothetical protein; PFAM: protein of unknown function DUF790; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF790); hypothetical protein complement(3487896..3489269) Isosphaera pallida ATCC 43644 10156527 YP_004179518.1 CDS Isop_2393 NC_014962.1 3489400 3490944 R COGs: COG1061 DNA or RNA helicase of superfamily II; InterPro IPR014001: IPR001650: IPR006935: IPR014021; KEGG: scl:sce6811 DNA repair protein; PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: DNA repair protein; PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; type III restriction protein res subunit complement(3489400..3490944) Isosphaera pallida ATCC 43644 10156528 YP_004179519.1 CDS Isop_2394 NC_014962.1 3491130 3491354 R InterPro IPR013424: IPR011449; KEGG: ote:Oter_2200 hypothetical protein; PFAM: protein of unknown function DUF1555; SPTR: Extracellular repeat protein, HAF family; PFAM: PEP-CTERM motif; TIGRFAM: PEP-CTERM putative exosortase interaction domain; hypothetical protein complement(3491130..3491354) Isosphaera pallida ATCC 43644 10156529 YP_004179520.1 CDS Isop_2395 NC_014962.1 3491752 3492618 R KEGG: rpc:RPC_3182 peptidase C14, caspase catalytic subunit P20; SPTR: Peptidase C14, caspase catalytic subunit p20; hypothetical protein complement(3491752..3492618) Isosphaera pallida ATCC 43644 10156530 YP_004179521.1 CDS Isop_2396 NC_014962.1 3493063 3495591 R COGs: COG0515 Serine/threonine protein kinase; InterProIPR020635: IPR002290: IPR008271: IPR017442: IPR 005532: IPR000719; KEGG: cya:CYA_2859 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; protein of unknown function DUF323; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine kinase PKN9; PFAM: Protein kinase domain; Formylglycine-generating sulfatase enzyme; serine/threonine protein kinase complement(3493063..3495591) Isosphaera pallida ATCC 43644 10156531 YP_004179522.1 CDS Isop_2397 NC_014962.1 3495631 3499593 R COGs: COG0658 membrane metal-binding protein; InterPro IPR004477: IPR000073; KEGG: rba:RB9840 competence protein ComEC/Rec2; PFAM: ComEC/Rec2-related protein; alpha/beta hydrolase fold; SPTR: Probable competence protein; TIGRFAM: ComEC/Rec2-related protein; PFAM: Competence protein; Metallo-beta-lactamase superfamily; X-Pro dipeptidyl-peptidase (S15 family); TIGRFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-like protein complement(3495631..3499593) Isosphaera pallida ATCC 43644 10156532 YP_004179523.1 CDS Isop_2398 NC_014962.1 3499906 3500664 R COGs: COG0740 Protease subunit of ATP-dependent Clp protease; InterPro IPR018215: IPR001907; KEGG: psl:Psta_1762 endopeptidase Clp; PFAM: peptidase S14 ClpP; PRIAM: Endopeptidase Clp; SPTR: ATP-dependent Clp protease proteolytic subunit; PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; ATP-dependent Clp protease proteolytic subunit ClpP complement(3499906..3500664) Isosphaera pallida ATCC 43644 10156533 YP_004179524.1 CDS Isop_2399 NC_014962.1 3500797 3502236 R COGs: COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); InterPro IPR005215: IPR008881: IPR008880; KEGG: psl:Psta_1761 trigger factor; PFAM: trigger factor domain-containing protein; SPTR: Trigger factor; TIGRFAM: trigger factor; PFAM: Bacterial trigger factor protein (TF); Bacterial trigger factor protein (TF) C-terminus; TIGRFAM: trigger factor; trigger factor complement(3500797..3502236) Isosphaera pallida ATCC 43644 10156534 YP_004179525.1 CDS Isop_2400 NC_014962.1 3503027 3505159 R COGs: COG1523 Type II secretory pathway pullulanase PulA and related glycosidase; InterPro IPR006589: IPR011837: IPR004193: IPR006047; KEGG: dak:DaAHT2_0475 glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); TIGRFAM: glycogen debranching enzyme GlgX; isoamylase complement(3503027..3505159) Isosphaera pallida ATCC 43644 10156535 YP_004179526.1 CDS Isop_2401 NC_014962.1 3505509 3506057 R COGs: COG0406 Fructose-2 6-bisphosphatase; InterPro IPR013078; KEGG: plm:Plim_1026 phosphoglycerate mutase; PFAM: Phosphoglycerate mutase; SPTR: Phosphoglycerate mutase; PFAM: Phosphoglycerate mutase family; phosphoglycerate mutase complement(3505509..3506057) Isosphaera pallida ATCC 43644 10156536 YP_004179527.1 CDS Isop_2402 NC_014962.1 3506059 3506838 R COGs: COG0368 Cobalamin-5-phosphate synthase; InterPro IPR003805; KEGG: plm:Plim_1024 cobalamin-5-phosphate synthase CobS; PFAM: cobalamin-5-phosphate synthase CobS; SPTR: Cobalamin-5-phosphate synthase CobS; PFAM: Cobalamin-5-phosphate synthase; TIGRFAM: cobalamin 5'-phosphate synthase/cobalamin synthase; cobalamin-5-phosphate synthase CobS complement(3506059..3506838) Isosphaera pallida ATCC 43644 10156537 YP_004179528.1 CDS Isop_2403 NC_014962.1 3506828 3507847 R COGs: COG2038 NaMN:DMB phosphoribosyltransferase; InterPro IPR017846: IPR003200; KEGG: plm:Plim_1023 nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; PRIAM: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; SPTR: Nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; TIGRFAM:nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase complement(3506828..3507847) Isosphaera pallida ATCC 43644 10156538 YP_004179529.1 CDS Isop_2404 NC_014962.1 3508019 3508735 R COGs: COG2102 ATPase of PP-loop superfamily; InterPro IPR002761; KEGG: aba:Acid345_3648 protein of unknown function DUF71, ATPase; PFAM: protein of unknown function DUF71 ATP-binding region; SPTR: Putative uncharacterized protein; PFAM: ATP-binding region; TIGRFAM: MJ0570-related uncharacterized domain; hypothetical protein complement(3508019..3508735) Isosphaera pallida ATCC 43644 10156539 YP_004179530.1 CDS Isop_2405 NC_014962.1 3508732 3509673 R COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: rba:RB11981 ABC transporter substrate-binding protein; SPTR: Probable ABC transporter (Substrate-binding protein); PFAM: Periplasmic binding protein; ABC transporter substrate-binding protein complement(3508732..3509673) Isosphaera pallida ATCC 43644 10156540 YP_004179531.1 CDS Isop_2406 NC_014962.1 3509687 3510235 R KEGG: plm:Plim_1022 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3509687..3510235) Isosphaera pallida ATCC 43644 10156541 YP_004179532.1 CDS Isop_2407 NC_014962.1 3510611 3511675 R InterPro IPR013442; KEGG: tra:Trad_1670 CRISPR-associated protein, APE2256 family; PFAM: CRISPR-associated protein APE2256; SPTR: CRISPR-associated protein, APE2256 family; TIGRFAM: CRISPR-associated protein, APE2256 family; PFAM: CRISPR-associated protein (Cas_APE2256); TIGRFAM: putative CRISPR-associated protein, APE2256 family; CRISPR-associated protein complement(3510611..3511675) Isosphaera pallida ATCC 43644 10156542 YP_004179533.1 CDS Isop_2409 NC_014962.1 3512245 3513105 R KEGG: btk:BT9727_2837 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3512245..3513105) Isosphaera pallida ATCC 43644 10156544 YP_004179534.1 CDS Isop_2410 NC_014962.1 3513485 3514825 R COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR007087: IPR006119: IPR011109; KEGG: mag:amb1201 site-specific recombinase; PFAM: Resolvase domain; Recombinase; SPTR: Site-specific recombinase; PFAM: Recombinase; Resolvase, N terminal domain; resolvase domain-containing protein complement(3513485..3514825) Isosphaera pallida ATCC 43644 10156545 YP_004179535.1 CDS Isop_2411 NC_014962.1 3514829 3515218 R KEGG: sus:Acid_6199 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3514829..3515218) Isosphaera pallida ATCC 43644 10156546 YP_004179536.1 CDS Isop_2412 NC_014962.1 3515215 3515469 R COGs: COG2442 conserved hypothetical protein; InterPro IPR007367; KEGG: npu:Npun_R2704 hypothetical protein; PFAM: protein of unknown function DUF433; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF433); hypothetical protein complement(3515215..3515469) Isosphaera pallida ATCC 43644 10156547 YP_004179537.1 CDS Isop_2413 NC_014962.1 3515865 3517961 D COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR006119: IPR011109; KEGG: fre:Franean1_0458 resolvase domain-containing protein; PFAM: Resolvase domain; Recombinase; SPTR: Resolvase domain; PFAM: Recombinase; Resolvase, N terminal domain; resolvase domain-containing protein 3515865..3517961 Isosphaera pallida ATCC 43644 10156548 YP_004179538.1 CDS Isop_2415 NC_014962.1 3518579 3518980 R KEGG: ngr:NAEGRDRAFT_37179 U5 snRNP-specific spliceosomal protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3518579..3518980) Isosphaera pallida ATCC 43644 10156550 YP_004179539.1 CDS Isop_2416 NC_014962.1 3519060 3519350 R KEGG: bmi:BMEA_A1879 pyridoxamine kinase; SPTR: Putative uncharacterized protein; hypothetical protein complement(3519060..3519350) Isosphaera pallida ATCC 43644 10156551 YP_004179540.1 CDS Isop_2417 NC_014962.1 3519363 3519569 R KEGG: pol:Bpro_2708 N-formylglutamate amidohydrolase; hypothetical protein complement(3519363..3519569) Isosphaera pallida ATCC 43644 10156552 YP_004179541.1 CDS Isop_2418 NC_014962.1 3519683 3519979 R KEGG: bfr:BF1384 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein complement(3519683..3519979) Isosphaera pallida ATCC 43644 10156553 YP_004179542.1 CDS Isop_2419 NC_014962.1 3520004 3527479 R COGs: COG3209 Rhs family protein; InterPro IPR003587: IPR006530: IPR006141; KEGG: plm:Plim_1036 AmoP; PFAM: YD repeat-containing protein; SMART: Hedgehog/intein hint domain protein; SPTR: AmoP; TIGRFAM: YD repeat protein; PFAM: RHS Repeat; Protein of unknown function (DUF1557); TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies); YD repeat-containing protein complement(3520004..3527479) Isosphaera pallida ATCC 43644 10156554 YP_004179543.1 CDS Isop_2420 NC_014962.1 3527654 3528484 R InterPro IPR006342; KEGG: naz:Aazo_5202 FkbM family methyltransferase; SPTR: Methyltransferase FkbM family; TIGRFAM: methyltransferase FkbM family; TIGRFAM: methyltransferase, FkbM family; FkbM family methyltransferase complement(3527654..3528484) Isosphaera pallida ATCC 43644 10156555 YP_004179544.1 CDS Isop_2421 NC_014962.1 3528487 3529824 R KEGG: cre:CHLREDRAFT_149710 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Mannosyltransferase putative; hypothetical protein complement(3528487..3529824) Isosphaera pallida ATCC 43644 10156556 YP_004179545.1 CDS Isop_2422 NC_014962.1 3529821 3531428 R KEGG: cgr:CAGL0J01771g hypothetical protein; SPTR: Similarity; hypothetical protein complement(3529821..3531428) Isosphaera pallida ATCC 43644 10156557 YP_004179546.1 CDS Isop_2423 NC_014962.1 3531425 3532105 R KEGG: xop:PXO_02602 transcriptional regulatory protein, C terminal; SPTR: Putative uncharacterized protein; hypothetical protein complement(3531425..3532105) Isosphaera pallida ATCC 43644 10156558 YP_004179547.1 CDS Isop_2424 NC_014962.1 3532105 3532896 R KEGG: dac:Daci_0928 AMP-dependent synthetase and ligase; SPTR: Putative uncharacterized protein; hypothetical protein complement(3532105..3532896) Isosphaera pallida ATCC 43644 10156559 YP_004179548.1 CDS Isop_2425 NC_014962.1 3532907 3534883 R KEGG: sit:TM1040_1281 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3532907..3534883) Isosphaera pallida ATCC 43644 10156560 YP_004179549.1 CDS Isop_2426 NC_014962.1 3534886 3535086 R KEGG: ppf:Pput_4105 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3534886..3535086) Isosphaera pallida ATCC 43644 10156561 YP_004179550.1 CDS Isop_2427 NC_014962.1 3535086 3535586 R KEGG: psl:Psta_2206 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3535086..3535586) Isosphaera pallida ATCC 43644 10156562 YP_004179551.1 CDS Isop_2428 NC_014962.1 3535604 3536641 R InterPro IPR018114; KEGG: lsg:lse_0520 peptidoglycan bound protein (LPXTG motif); SPTR: Peptidoglycan bound protein (LPXTG motif); hypothetical protein complement(3535604..3536641) Isosphaera pallida ATCC 43644 10156563 YP_004179552.1 CDS Isop_2429 NC_014962.1 3536662 3537102 R KEGG: chy:CHY_1665 hypothetical protein; SPTR: Antigen A; PFAM: Phage major tail protein 2; hypothetical protein complement(3536662..3537102) Isosphaera pallida ATCC 43644 10156564 YP_004179553.1 CDS Isop_2430 NC_014962.1 3537115 3537546 R KEGG: avi:Avi_8200 replication protein B; SPTR: Replication protein B; hypothetical protein complement(3537115..3537546) Isosphaera pallida ATCC 43644 10156565 YP_004179554.1 CDS Isop_2431 NC_014962.1 3537550 3537975 R KEGG: htu:Htur_3964 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3537550..3537975) Isosphaera pallida ATCC 43644 10156566 YP_004179555.1 CDS Isop_2432 NC_014962.1 3537976 3538356 R KEGG: plm:Plim_2119 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3537976..3538356) Isosphaera pallida ATCC 43644 10156567 YP_004179556.1 CDS Isop_2433 NC_014962.1 3538364 3538699 R COGs: COG5471 conserved hypothetical protein; InterPro IPR011231; KEGG: sbl:Sbal_3597 gifsy-2 prophage; putative RecA/RadA recombinase; PFAM: protein of unknown function UCP030771; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2190); hypothetical protein complement(3538364..3538699) Isosphaera pallida ATCC 43644 10156568 YP_004179557.1 CDS Isop_2434 NC_014962.1 3538732 3540795 R KEGG: dsa:Desal_2132 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Mu-like prophage major head subunit gpT; hypothetical protein complement(3538732..3540795) Isosphaera pallida ATCC 43644 10156569 YP_004179558.1 CDS Isop_2435 NC_014962.1 3540758 3542254 R COGs: COG5511 Bacteriophage capsid protein; InterPro IPR006429; KEGG: lhk:LHK_01658 phage portal protein, lambda family; PFAM: portal protein lambda; SPTR: Phage portal protein, lambda family; TIGRFAM: phage portal protein, lambda family; PFAM: Phage portal protein, lambda family; TIGRFAM: phage portal protein, lambda family; phage portal protein, lambda family complement(3540758..3542254) Isosphaera pallida ATCC 43644 10156570 YP_004179559.1 CDS Isop_2436 NC_014962.1 3542257 3542454 R KEGG: osa:4346641 hypothetical protein; SPTR: Putative Peptidyl Prolyl cis-trans isomerase; hypothetical protein complement(3542257..3542454) Isosphaera pallida ATCC 43644 10156571 YP_004179560.1 CDS Isop_2437 NC_014962.1 3542781 3543110 D KEGG: sfu:Sfum_3782 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3542781..3543110 Isosphaera pallida ATCC 43644 10156572 YP_004179561.1 CDS Isop_2438 NC_014962.1 3543307 3543882 D InterPro IPR000843: IPR014284; KEGG: sfu:Sfum_3783 ECF subfamily RNA polymerase sigma-24 factor; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 familyRNA polymerase sigma factor 3543307..3543882 Isosphaera pallida ATCC 43644 10156573 YP_004179562.1 CDS Isop_2439 NC_014962.1 3543946 3544797 D KEGG: oan:Oant_0214 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3543946..3544797 Isosphaera pallida ATCC 43644 10156574 YP_004179563.1 CDS Isop_2440 NC_014962.1 3544813 3545583 D KEGG: mag:amb0352 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3544813..3545583 Isosphaera pallida ATCC 43644 10156575 YP_004179564.1 CDS Isop_2441 NC_014962.1 3545576 3546031 D InterPro IPR007731; KEGG: mgm:Mmc1_2920 hypothetical protein; PFAM: protein of unknown function DUF669; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF669); hypothetical protein 3545576..3546031 Isosphaera pallida ATCC 43644 10156576 YP_004179565.1 CDS Isop_2442 NC_014962.1 3546149 3546598 D COGs: COG4570 Holliday junction resolvase; InterPro IPR008822; KEGG: sgl:SG0745 putative phage endonuclease; PFAM: endodeoxyribonuclease RusA; SPTR: Endodeoxyribonuclease RusA; PFAM: Endodeoxyribonuclease RusA; endodeoxyribonuclease RusA 3546149..3546598 Isosphaera pallida ATCC 43644 10156577 YP_004179566.1 CDS Isop_2443 NC_014962.1 3546573 3548318 D COGs: COG1061 DNA or RNA helicase of superfamily II; InterProIPR014021: IPR001650: IPR006935: IPR018886: IPR 014001; KEGG: mag:amb0356 superfamily II DNA/RNA helicase; PFAM: type III restriction protein res subunit; helicase domain protein; Uncharacterised protein family UPF0547; SMART: helicase domain protein; DEAD-like helicase; SPTR: Helicase domain protein; PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; Uncharacterised protein family UPF0547; type III restriction protein res subunit 3546573..3548318 Isosphaera pallida ATCC 43644 10156578 YP_004179567.1 CDS Isop_2444 NC_014962.1 3548315 3550204 D COGs: COG3598 RecA-family ATPase; InterPro IPR015330: IPR014820; KEGG: aeh:Mlg_0791 ATPase-like protein; PFAM: Bifunctional DNA primase/polymerase; Primase 1; SPTR: Bifunctional DNA primase/polymerase; PFAM: Bifunctional DNA primase/polymerase, N-terminal; Primase C terminal 1 (PriCT-1); bifunctional DNA primase/polymerase 3548315..3550204 Isosphaera pallida ATCC 43644 10156579 YP_004179568.1 CDS Isop_2445 NC_014962.1 3550504 3551844 D COGs: COG0863 DNA modification methylase; InterPro IPR003115: IPR002941: IPR002295: IPR015840; KEGG: cbe:Cbei_1632 DNA methylase N-4/N-6 domain-containing protein; PFAM: ParB domain protein nuclease; DNA methylase N-4/N-6 domain protein; SMART: ParB domain protein nuclease; SPTR: DNA methylase N-4/N-6 domain protein; PFAM: DNA methylase; ParB-like nuclease domain; ParB domain-containing protein nuclease 3550504..3551844 Isosphaera pallida ATCC 43644 10156580 YP_004179569.1 CDS Isop_2446 NC_014962.1 3551786 3552265 D KEGG: rlt:Rleg2_1131 hypothetical protein; SPTR: ORF87; hypothetical protein 3551786..3552265 Isosphaera pallida ATCC 43644 10156581 YP_004179570.1 CDS Isop_2447 NC_014962.1 3552258 3552647 D KEGG: btr:Btr_0991 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3552258..3552647 Isosphaera pallida ATCC 43644 10156582 YP_004179571.1 CDS Isop_2448 NC_014962.1 3552644 3553087 D InterPro IPR015235; KEGG: pag:PLES_39201 hypothetical protein; PFAM: Domain of unknown function DUF1937; SPTR: Putative uncharacterized protein; PFAM: Nucleoside 2-deoxyribosyltransferase; Domain of unknown function (DUF1937); hypothetical protein 3552644..3553087 Isosphaera pallida ATCC 43644 10156583 YP_004179572.1 CDS Isop_2449 NC_014962.1 3553157 3553336 R KEGG: rlt:Rleg2_0092 hypothetical protein; SPTR: Prepilin peptidase; hypothetical protein complement(3553157..3553336) Isosphaera pallida ATCC 43644 10156584 YP_004179573.1 CDS Isop_2450 NC_014962.1 3553351 3553686 R KEGG: dde:Dde_1858 restriction endonuclease-like; SPTR: Putative uncharacterized protein; restriction endonuclease complement(3553351..3553686) Isosphaera pallida ATCC 43644 10156585 YP_004179574.1 CDS Isop_2451 NC_014962.1 3553827 3554051 D KEGG: xce:Xcel_1612 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3553827..3554051 Isosphaera pallida ATCC 43644 10156586 YP_004179575.1 CDS Isop_2452 NC_014962.1 3554041 3556308 D KEGG: plm:Plim_2131 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Phage terminase large subunit (GpA); hypothetical protein 3554041..3556308 Isosphaera pallida ATCC 43644 10156587 YP_004179576.1 CDS Isop_2453 NC_014962.1 3556383 3556589 D KEGG: dac:Daci_1505 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3556383..3556589 Isosphaera pallida ATCC 43644 10156588 YP_004179577.1 CDS Isop_2454 NC_014962.1 3556622 3557119 D KEGG: tai:Taci_1503 putative bacteriophage related protein; SPTR: Putative bacteriophage related protein; PFAM: Protein of unknown function (DUF2924); putative bacteriophage-like protein 3556622..3557119 Isosphaera pallida ATCC 43644 10156589 YP_004179578.1 CDS Isop_2455 NC_014962.1 3557116 3558708 D COGs: COG1961 Site-specific recombinase DNA invertase Pin homologs; InterPro IPR006119: IPR011109; KEGG: hoh:Hoch_2866 resolvase domain protein; PFAM: Resolvase domain; Recombinase; SPTR: Resolvase domain protein; PFAM: Recombinase; Resolvase, N terminal domain; resolvase domain-containing protein 3557116..3558708 Isosphaera pallida ATCC 43644 10156590 YP_004179579.1 CDS Isop_2456 NC_014962.1 3558705 3559118 D KEGG: hoh:Hoch_2796 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3558705..3559118 Isosphaera pallida ATCC 43644 10156591 YP_004179580.1 CDS Isop_2457 NC_014962.1 3559303 3560493 D KEGG: dde:Dde_0892 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3559303..3560493 Isosphaera pallida ATCC 43644 10156592 YP_004179581.1 CDS Isop_2458 NC_014962.1 3560471 3561517 D KEGG: sfu:Sfum_3781 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3560471..3561517 Isosphaera pallida ATCC 43644 10156593 YP_004179582.1 CDS Isop_2459 NC_014962.1 3562013 3563380 R InterPro IPR006626; KEGG: rlg:Rleg_1748 hemolysin-type calcium-binding region; SPTR: Hemolysin-type calcium-binding region; PFAM: Protein of unknown function (DUF1565); hypothetical protein complement(3562013..3563380) Isosphaera pallida ATCC 43644 10156595 YP_004179583.1 CDS Isop_2461 NC_014962.1 3564650 3565225 R COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: plm:Plim_2616 RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; SPTR: RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; ECF subfamily RNA polymerase sigma-24 factor complement(3564650..3565225) Isosphaera pallida ATCC 43644 10156597 YP_004179584.1 CDS Isop_2462 NC_014962.1 3565522 3566025 D COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR001789; KEGG: plm:Plim_2180 response regulator receiver; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator receiver; PFAM: Response regulator receiver domain; response regulator receiver protein 3565522..3566025 Isosphaera pallida ATCC 43644 10156598 YP_004179585.1 CDS Isop_2463 NC_014962.1 3566208 3567749 D KEGG: ava:Ava_0857 putative phosphate transport system substrate-binding protein; SPTR: Putative phosphate transport system substrate-binding protein; hypothetical protein 3566208..3567749 Isosphaera pallida ATCC 43644 10156599 YP_004179586.1 CDS Isop_2464 NC_014962.1 3567751 3569304 D COGs: COG1543 conserved hypothetical protein; KEGG: noc:Noc_0099 glycoside hydrolase family protein; SPTR: Glycoside hydrolase, family 57; hypothetical protein 3567751..3569304 Isosphaera pallida ATCC 43644 10156600 YP_004179587.1 CDS Isop_2465 NC_014962.1 3569388 3569552 D KEGG: sbi:SORBI_08g017780 hypothetical protein; hypothetical protein 3569388..3569552 Isosphaera pallida ATCC 43644 10156601 YP_004179588.1 CDS Isop_2466 NC_014962.1 3569549 3570091 D KEGG: tpr:Tpau_1451 ABC transporter related protein; SPTR: Transmembrane transport protein; hypothetical protein 3569549..3570091 Isosphaera pallida ATCC 43644 10156602 YP_004179589.1 CDS Isop_2467 NC_014962.1 3570042 3571787 R COGs: COG4805 conserved hypothetical protein; InterPro IPR010281; KEGG: scl:sce6178 hypothetical protein; PFAM: protein of unknown function DUF885; SPTR: Putative uncharacterized protein; manually curated; PFAM: Bacterial protein of unknown function (DUF885); hypothetical protein complement(3570042..3571787) Isosphaera pallida ATCC 43644 10156603 YP_004179590.1 CDS Isop_2468 NC_014962.1 3572084 3572329 R KEGG: cre:CHLREDRAFT_147815 flagellar associated protein; SPTR: Polysaccharide deacetylase; hypothetical protein complement(3572084..3572329) Isosphaera pallida ATCC 43644 10156604 YP_004179591.1 CDS Isop_2469 NC_014962.1 3572437 3573378 R COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterPro IPR006176: IPR006108; KEGG: afw:Anae109_2134 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; SPTR: 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; 3-hydroxyacyl-CoA dehydrogenase complement(3572437..3573378) Isosphaera pallida ATCC 43644 10156605 YP_004179592.1 CDS Isop_2470 NC_014962.1 3573522 3574052 R KEGG: nhl:Nhal_2099 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3573522..3574052) Isosphaera pallida ATCC 43644 10156606 YP_004179593.1 CDS Isop_2471 NC_014962.1 3574306 3575847 R InterPro IPR017909: IPR006311; KEGG: rba:RB5268 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; hypothetical protein complement(3574306..3575847) Isosphaera pallida ATCC 43644 10156607 YP_004179594.1 CDS Isop_2472 NC_014962.1 3576429 3577007 D KEGG: mrd:Mrad2831_1437 inner-membrane translocator; SPTR: ABC transporter related protein; hypothetical protein 3576429..3577007 Isosphaera pallida ATCC 43644 10156608 YP_004179595.1 CDS Isop_2474 NC_014962.1 3578354 3578971 R InterPro IPR013249: IPR014284; KEGG: psl:Psta_3331 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: Sigma-70 region 4 type 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: ECF sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 familyRNA polymerase sigma factor complement(3578354..3578971) Isosphaera pallida ATCC 43644 10156610 YP_004179596.1 CDS Isop_2475 NC_014962.1 3579115 3579555 D COGs: COG1490 D-Tyr-tRNAtyr deacylase; InterPro IPR003732; KEGG: afw:Anae109_0196 D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase; SPTR: D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; D-tyrosyl-tRNA(Tyr) deacylase 3579115..3579555 Isosphaera pallida ATCC 43644 10156611 YP_004179597.1 CDS Isop_2476 NC_014962.1 3579883 3581388 R COGs: COG0554 Glycerol kinase; InterProIPR022272: IPR018483: IPR018484: IPR018485: IPR 005999; KEGG: gme:Gmet_1676 glycerol kinase; PFAM: Carbohydrate kinase, FGGY-like; SPTR: Glycerol kinase; TIGRFAM: glycerol kinase; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase; glycerol kinase complement(3579883..3581388) Isosphaera pallida ATCC 43644 10156612 YP_004179598.1 CDS Isop_2477 NC_014962.1 3581645 3582913 R COGs: COG0673 dehydrogenase and related protein; InterPro IPR017909: IPR000683: IPR006311; KEGG: plm:Plim_0037 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; oxidoreductase domain-containing protein complement(3581645..3582913) Isosphaera pallida ATCC 43644 10156613 YP_004179599.1 CDS Isop_2478 NC_014962.1 3583241 3584377 R COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: plm:Plim_0907 protein of unknown function DUF323; PFAM: protein of unknown function DUF323; SPTR: Putative uncharacterized protein; PFAM: Formylglycine-generating sulfatase enzyme; hypothetical protein complement(3583241..3584377) Isosphaera pallida ATCC 43644 10156614 YP_004179600.1 CDS Isop_2479 NC_014962.1 3584538 3585581 D COGs: COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis; InterPro IPR003374; KEGG: sus:Acid_6143 ApbE family lipoprotein; PFAM: ApbE family lipoprotein; SPTR: Membrane-associated lipoprotein involved in thiamine biosynthesis; PFAM: ApbE family; ApbE family lipoprotein 3584538..3585581 Isosphaera pallida ATCC 43644 10156615 YP_004179601.1 CDS Isop_2480 NC_014962.1 3585620 3586390 R KEGG: plm:Plim_1979 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3585620..3586390) Isosphaera pallida ATCC 43644 10156616 YP_004179602.1 CDS Isop_2481 NC_014962.1 3586460 3587140 R KEGG: rca:Rcas_4229 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3586460..3587140) Isosphaera pallida ATCC 43644 10156617 YP_004179603.1 CDS Isop_2482 NC_014962.1 3587321 3587863 R COGs: COG0054 Riboflavin synthase beta-chain; InterPro IPR002180; KEGG: hna:Hneap_1866 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase; SPTR: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase complement(3587321..3587863) Isosphaera pallida ATCC 43644 10156618 YP_004179604.1 CDS Isop_2483 NC_014962.1 3587811 3587942 R hypothetical protein complement(3587811..3587942) Isosphaera pallida ATCC 43644 10156619 YP_004179605.1 CDS Isop_2484 NC_014962.1 3588343 3589266 D COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: psl:Psta_2011 dolichyl-phosphate beta-D-mannosyltransferase; PFAM: glycosyl transferase family 2; PRIAM: Dolichyl-phosphate beta-D-mannosyltransferase; SPTR: Dolichyl-phosphate beta-D-mannosyltransferase; PFAM: Glycosyl transferase family 2; dolichyl-phosphate beta-D-mannosyltransferase 3588343..3589266 Isosphaera pallida ATCC 43644 10156620 YP_004179606.1 CDS Isop_2485 NC_014962.1 3589386 3598049 R KEGG: tcu:Tcur_1098 chromosome partitioning ATPase; SPTR: Mucin-like protein; hypothetical protein complement(3589386..3598049) Isosphaera pallida ATCC 43644 10156621 YP_004179607.1 CDS Isop_2486 NC_014962.1 3598130 3599611 R COGs: COG0498 Threonine synthase; InterPro IPR001926: IPR004450; KEGG: psl:Psta_0617 threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; PRIAM: Threonine synthase; SPTR: Threonine synthase (ThrC); TIGRFAM: threonine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase; L-threonine synthase complement(3598130..3599611) Isosphaera pallida ATCC 43644 10156622 YP_004179608.1 CDS Isop_2487 NC_014962.1 3599969 3600754 D KEGG: cef:CE1458 PTS glucose-specific IIABC; SPTR: PTS glucose-specific IIABC; hypothetical protein 3599969..3600754 Isosphaera pallida ATCC 43644 10156623 YP_004179609.1 CDS Isop_2488 NC_014962.1 3600836 3602275 D InterPro IPR010839; KEGG: sus:Acid_3874 hypothetical protein; PFAM: protein of unknown function DUF1446; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1446); hypothetical protein 3600836..3602275 Isosphaera pallida ATCC 43644 10156624 YP_004179610.1 CDS Isop_2489 NC_014962.1 3602362 3602718 D KEGG: rpf:Rpic12D_0110 protein of unknown function DUF1446; SPTR: Putative uncharacterized protein; hypothetical protein 3602362..3602718 Isosphaera pallida ATCC 43644 10156625 YP_004179611.1 CDS Isop_2490 NC_014962.1 3602863 3603759 D InterPro IPR013424; KEGG: cai:Caci_0452 NHL repeat-containing protein; SPTR: Putative uncharacterized protein; hypothetical protein 3602863..3603759 Isosphaera pallida ATCC 43644 10156626 YP_004179612.1 CDS Isop_2491 NC_014962.1 3603815 3605263 R COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR002078: IPR001789: IPR002197: IPR003593; KEGG: plm:Plim_0701 sigma-54 factor interaction domain-containing protein; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: Transcriptional regulatory protein zraR; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; Fis family two component sigma54 specific transcriptional regulator complement(3603815..3605263) Isosphaera pallida ATCC 43644 10156627 YP_004179613.1 CDS Isop_2492 NC_014962.1 3605327 3606775 R COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR005467: IPR020003: IPR003661: IPR003594: IPR 004358; KEGG: plm:Plim_3849 ATP-binding region ATPase domain protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: ATP-binding region ATPase domain protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; integral membrane sensor signal transduction histidine kinase complement(3605327..3606775) Isosphaera pallida ATCC 43644 10156628 YP_004179614.1 CDS Isop_2493 NC_014962.1 3607147 3608232 R InterPro IPR012902; KEGG: plm:Plim_1767 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein complement(3607147..3608232) Isosphaera pallida ATCC 43644 10156629 YP_004179615.1 CDS Isop_2494 NC_014962.1 3608605 3609411 R COGs: COG1692 conserved hypothetical protein; KEGG: psl:Psta_3982 calcineurin-like phosphoesterase; SPTR: Calcineurin-like phosphoesterase; TIGRFAM: metallophosphoesterase, MG_246/BB_0505 family; calcineurin-like phosphoesterase complement(3608605..3609411) Isosphaera pallida ATCC 43644 10156630 YP_004179616.1 CDS Isop_2495 NC_014962.1 3609844 3611454 R COGs: COG1418 HD superfamily hydrolase; InterProIPR004088: IPR018111: IPR006674: IPR004087: IPR 003607: IPR017705: IPR006675; KEGG: psl:Psta_3981 RNA binding metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; K Homology, type 1, subgroup; SMART: metal-dependent phosphohydrolase HD region; KH domain protein; SPTR: RNA binding metal dependent phosphohydrolase; TIGRFAM: YmdA/YtgF protein; metal dependent phophohydrolase; PFAM: KH domain; HD domain; Domain of unknown function (DUF3552); TIGRFAM: conserved hypothetical protein YmdA/YtgF; uncharacterized domain HDIG; metal dependent phosphohydrolase complement(3609844..3611454) Isosphaera pallida ATCC 43644 10156631 YP_004179617.1 CDS Isop_2496 NC_014962.1 3611526 3613415 R COGs: COG3263 NhaP-type Na+/H+ and K+/H+ antiporter with a unique C-terminal domain; InterPro IPR006037: IPR006153; KEGG: rba:RB11069 potassium/proton antiporter; PFAM: sodium/hydrogen exchanger; TrkA-C domain protein; SPTR: Putative Na(+)/H(+) exchanger ycgO; PFAM: Sodium/hydrogen exchanger family; TrkA-C domain; TC 2.A.36; potassium/proton antiporter, CPA1 family complement(3611526..3613415) Isosphaera pallida ATCC 43644 10156632 YP_004179618.1 CDS Isop_2497 NC_014962.1 3613792 3614535 D InterPro IPR017909: IPR006311; KEGG: swi:Swit_2537 manganese and iron superoxide dismutase; SPTR: Manganese and iron superoxide dismutase; hypothetical protein 3613792..3614535 Isosphaera pallida ATCC 43644 10156633 YP_004179619.1 CDS Isop_2498 NC_014962.1 3614644 3615576 D COGs: COG1397 ADP-ribosylglycohydrolase; InterPro IPR005502; KEGG: gvi:glr0111 ADP-ribosylglycohydrolase; PFAM: ADP-ribosylation/Crystallin J1; SPTR: Glr0111 protein; PFAM: ADP-ribosylglycohydrolase; ADP-ribosylation/Crystallin J1 3614644..3615576 Isosphaera pallida ATCC 43644 10156634 YP_004179620.1 CDS Isop_2499 NC_014962.1 3615747 3618188 R KEGG: rrs:RoseRS_0098 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3615747..3618188) Isosphaera pallida ATCC 43644 10156635 YP_004179621.1 CDS Isop_2500 NC_014962.1 3618679 3620157 D InterPro IPR001818: IPR021190; KEGG: hwa:HQ1193A cell surface glycoprotein; PFAM: peptidase M10A and M12B matrixin and adamalysin; SPTR: Probable cell surface glycoprotein; PFAM: Matrixin; peptidase M10A and M12B matrixin and adamalysin 3618679..3620157 Isosphaera pallida ATCC 43644 10156636 YP_004179622.1 CDS Isop_2501 NC_014962.1 3620396 3621013 D COGs: COG0605 Superoxide dismutase; InterPro IPR019833: IPR019831: IPR019832: IPR001189; KEGG: xca:xccb100_1900 superoxidase dismutase; PFAM: Manganese/iron superoxide dismutase-like; PRIAM: Superoxide dismutase; SPTR: Superoxide dismutase; PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain; Superoxide dismutase 3620396..3621013 Isosphaera pallida ATCC 43644 10156637 YP_004179623.1 CDS Isop_2502 NC_014962.1 3621422 3622945 D KEGG: cre:CHLREDRAFT_205670 hypothetical protein; SPTR: Predicted protein; hypothetical protein 3621422..3622945 Isosphaera pallida ATCC 43644 10156638 YP_004179624.1 CDS Isop_2503 NC_014962.1 3623140 3623859 R COGs: COG2360 Leu/Phe-tRNA-protein transferase; InterPro IPR004616; KEGG: pfo:Pfl01_3587 leucyl/phenylalanyl-tRNA--protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase; PRIAM: Leucyltransferase; SPTR: Leucyl/phenylalanyl-tRNA--protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; PFAM: Leucyl/phenylalanyl-tRNA protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA--protein transferase; leucyl/phenylalanyl-tRNA/protein transferase complement(3623140..3623859) Isosphaera pallida ATCC 43644 10156639 YP_004179625.1 CDS Isop_2504 NC_014962.1 3623920 3624828 R COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR002173: IPR011611; KEGG: psl:Psta_3794 PfkB domain protein; PFAM: PfkB domain protein; SPTR: PfkB; PFAM: pfkB family carbohydrate kinase; PfkB domain-containing protein complement(3623920..3624828) Isosphaera pallida ATCC 43644 10156640 YP_004179626.1 CDS Isop_2505 NC_014962.1 3624953 3626422 R COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; InterPro IPR001412: IPR020058: IPR020060: IPR004527; KEGG: rba:RB7600 glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; SPTR: Glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family; glutamyl-tRNA synthetase complement(3624953..3626422) Isosphaera pallida ATCC 43644 10156641 YP_004179627.1 CDS Isop_2506 NC_014962.1 3626687 3630670 R KEGG: plm:Plim_3939 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3626687..3630670) Isosphaera pallida ATCC 43644 10156642 YP_004179628.1 CDS Isop_2507 NC_014962.1 3630925 3631164 R InterPro IPR005651; KEGG: sti:Sthe_1322 protein of unknown function DUF343; PFAM: protein of unknown function DUF343; SPTR: Putative uncharacterized protein; hypothetical protein complement(3630925..3631164) Isosphaera pallida ATCC 43644 10156643 YP_004179629.1 CDS Isop_2508 NC_014962.1 3631919 3633085 D COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; KEGG: psl:Psta_1537 peptidase S9 prolyl oligopeptidase active site domain protein; SPTR: Alpha/beta hydrolase domain-containing protein; PFAM: alpha/beta hydrolase fold; hypothetical protein 3631919..3633085 Isosphaera pallida ATCC 43644 10156644 YP_004179630.1 CDS Isop_2509 NC_014962.1 3632985 3633299 R KEGG: bcj:BCAL1681 hypothetical protein; SPTR: Putative exported protein; hypothetical protein complement(3632985..3633299) Isosphaera pallida ATCC 43644 10156645 YP_004179631.1 CDS Isop_2510 NC_014962.1 3634066 3635373 D InterPro IPR001818: IPR021190: IPR006026; KEGG: nml:Namu_5076 serine/threonine protein kinase; PFAM: peptidase M10A and M12B matrixin and adamalysin; SMART: peptidase metallopeptidase; SPTR: Serine/threonine protein kinase; PFAM: Matrixin; TIGRFAM: conserved repeat domain; peptidase M10A and M12B matrixin and adamalysin 3634066..3635373 Isosphaera pallida ATCC 43644 10156646 YP_004179632.1 CDS Isop_2511 NC_014962.1 3635818 3636798 D KEGG: osa:4336587 hypothetical protein; SPTR: OSIGBa0134H18.7 protein; hypothetical protein 3635818..3636798 Isosphaera pallida ATCC 43644 10156647 YP_004179633.1 CDS Isop_2512 NC_014962.1 3636953 3637456 D InterPro IPR000835; KEGG: psl:Psta_1616 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; SPTR: Probable marR-family transcription regulator; PFAM: MarR family; MarR family transcriptional regulator 3636953..3637456 Isosphaera pallida ATCC 43644 10156648 YP_004179634.1 CDS Isop_2513 NC_014962.1 3637794 3638378 D COGs: COG0431 flavoprotein; InterPro IPR005025; KEGG: wch:wcw_1265 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR: Putative uncharacterized protein; PFAM: NADPH-dependent FMN reductase; NADPH-dependent FMN reductase 3637794..3638378 Isosphaera pallida ATCC 43644 10156649 YP_004179635.1 CDS Isop_2514 NC_014962.1 3638686 3642264 R KEGG: lma:LmjF35.0540 proteophosphoglycan 5; SPTR: Proteophosphoglycan 5; hypothetical protein complement(3638686..3642264) Isosphaera pallida ATCC 43644 10156650 YP_004179636.1 CDS Isop_2515 NC_014962.1 3642354 3644078 R KEGG: hsa:4583 mucin 2, oligomeric mucus/gel-forming; SPTR: Mucin-2; hypothetical protein complement(3642354..3644078) Isosphaera pallida ATCC 43644 10156651 YP_004179637.1 CDS Isop_2516 NC_014962.1 3644433 3645809 R InterPro IPR017909: IPR010869: IPR006311; KEGG: sus:Acid_5708 hypothetical protein; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501); hypothetical protein complement(3644433..3645809) Isosphaera pallida ATCC 43644 10156652 YP_004179638.1 CDS Isop_2517 NC_014962.1 3646185 3648107 D KEGG: rrs:RoseRS_4239 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3646185..3648107 Isosphaera pallida ATCC 43644 10156653 YP_004179639.1 CDS Isop_2518 NC_014962.1 3648481 3650487 D InterPro IPR006650: IPR019758: IPR000223; KEGG: plm:Plim_1125 peptidase S24 and S26 domain protein; SPTR: Peptidase S24 and S26 domain protein; peptidase S24 and S26 domain-containing protein 3648481..3650487 Isosphaera pallida ATCC 43644 10156654 YP_004179640.1 CDS Isop_2519 NC_014962.1 3650564 3651571 R KEGG: rbi:RB2501_02765 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Trehalose utilisation; hypothetical protein complement(3650564..3651571) Isosphaera pallida ATCC 43644 10156655 YP_004179641.1 CDS Isop_2520 NC_014962.1 3651839 3652594 D InterPro IPR019410; KEGG: plm:Plim_1383 methyltransferase type 12; PFAM: Methyltransferase-16, putative; SPTR: Methyltransferase domain family; PFAM: Putative methyltransferase; methyltransferase-16 3651839..3652594 Isosphaera pallida ATCC 43644 10156656 YP_004179642.1 CDS Isop_2521 NC_014962.1 3652551 3653942 R COGs: COG1524 Uncharacterized protein of the AP superfamily; InterPro IPR002591; KEGG: azl:AZL_b05760 hypothetical protein; PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; SPTR: Putative uncharacterized protein; PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase; type I phosphodiesterase/nucleotide pyrophosphatase complement(3652551..3653942) Isosphaera pallida ATCC 43644 10156657 YP_004179643.1 CDS Isop_2522 NC_014962.1 3653960 3654595 R KEGG: met:M446_0109 response regulator receiver protein; SPTR: Two component sensor kinase/response regulator hybrid; hypothetical protein complement(3653960..3654595) Isosphaera pallida ATCC 43644 10156658 YP_004179644.1 CDS Isop_2523 NC_014962.1 3654592 3658386 R COGs: COG2319 FOG: WD40 repeat; InterProIPR019782: IPR017986: IPR009056: IPR019775: IPR 019781: IPR001680; KEGG: sus:Acid_5711 hypothetical protein; PFAM: WD40 repeat, subgroup; SPTR: WD-40 repeat protein; PFAM: WD domain, G-beta repeat; Planctomycete cytochrome C; WD40 repeat-containing protein complement(3654592..3658386) Isosphaera pallida ATCC 43644 10156659 YP_004179645.1 CDS Isop_2524 NC_014962.1 3658486 3661014 R InterPro IPR003343: IPR011444; KEGG: sus:Acid_5709 hypothetical protein; PFAM: protein of unknown function DUF1549; Ig domain protein group 2 domain protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial Ig-like domain (group 2); Protein of unknown function (DUF1549); Protein of unknown function (DUF1553); hypothetical protein complement(3658486..3661014) Isosphaera pallida ATCC 43644 10156660 YP_004179646.1 CDS Isop_2525 NC_014962.1 3661838 3662935 D InterPro IPR000014; KEGG: ade:Adeh_3529 PAS/PAC sensor hybrid histidine kinase; SMART: PAS domain containing protein; SPTR: Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; TIGRFAM: PAS domain S-box; PAS sensor protein 3661838..3662935 Isosphaera pallida ATCC 43644 10156661 YP_004179647.1 CDS Isop_2526 NC_014962.1 3662994 3664370 D COGs: COG0673 dehydrogenase and related protein; InterPro IPR017909: IPR000683: IPR006311; KEGG: plm:Plim_3510 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase domain-containing protein 3662994..3664370 Isosphaera pallida ATCC 43644 10156662 YP_004179648.1 CDS Isop_2527 NC_014962.1 3664950 3667010 D KEGG: hoh:Hoch_6408 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: SpoIVB peptidase S55; hypothetical protein 3664950..3667010 Isosphaera pallida ATCC 43644 10156663 YP_004179649.1 CDS Isop_2528 NC_014962.1 3667939 3669495 D COGs: COG1003 Glycine cleavage system protein P (pyridoxal-binding) C-terminal domain; InterPro IPR020580; KEGG: psl:Psta_4670 glycine dehydrogenase (decarboxylating); PFAM: Glycine cleavage system P-protein-like; SPTR: Glycine dehydrogenase (Decarboxylating); manually curated; PFAM: Glycine cleavage system P-protein; glycine dehydrogenase subunit beta 3667939..3669495 Isosphaera pallida ATCC 43644 10156664 YP_004179650.1 CDS Isop_2529 NC_014962.1 3669562 3670491 D COGs: COG0095 Lipoate-protein ligase A; InterPro IPR004143; KEGG: plm:Plim_2597 biotin/lipoate A/B protein ligase; PFAM: biotin/lipoate A/B protein ligase; SPTR: Biotin/lipoate A/B protein ligase; PFAM: Biotin/lipoate A/B protein ligase family; biotin/lipoate A/B protein ligase 3669562..3670491 Isosphaera pallida ATCC 43644 10156665 YP_004179651.1 CDS Isop_2530 NC_014962.1 3671064 3671774 D COGs: COG1716 FOG: FHA domain; InterPro IPR000253; KEGG: psl:Psta_4736 FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; SPTR: FHA domain containing protein; PFAM: FHA domain; FHA domain-containing protein 3671064..3671774 Isosphaera pallida ATCC 43644 10156666 YP_004179652.1 CDS Isop_2531 NC_014962.1 3671990 3672967 D COGs: COG0714 MoxR-like ATPase; InterPro IPR011703: IPR016366; KEGG: mrb:Mrub_1314 ATPase associated with various cellular activities AAA_3; PFAM: ATPase associated with various cellular activities AAA_3; SPTR: ATPase associated with various cellular activities AAA_3; PFAM: ATPase family associated with various cellular activities (AAA); ATPase 3671990..3672967 Isosphaera pallida ATCC 43644 10156667 YP_004179653.1 CDS Isop_2532 NC_014962.1 3673055 3676423 D InterPro IPR019734: IPR013026: IPR001440; KEGG: cpc:Cpar_1554 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: TPR repeat-containing protein; PFAM: Tetratricopeptide repeat; hypothetical protein 3673055..3676423 Isosphaera pallida ATCC 43644 10156668 YP_004179654.1 CDS Isop_2533 NC_014962.1 3676654 3677328 D COGs: COG3485 Protocatechuate 3 4-dioxygenase beta subunit; InterPro IPR017909: IPR000627: IPR006311; KEGG: psl:Psta_3106 intradiol ring-cleavage dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; SPTR: Intradiol ring-cleavage dioxygenase; PFAM: Dioxygenase; intradiol ring-cleavage dioxygenase 3676654..3677328 Isosphaera pallida ATCC 43644 10156669 YP_004179655.1 CDS Isop_2534 NC_014962.1 3677515 3678966 R InterPro IPR017909: IPR010869: IPR006311; KEGG: psl:Psta_2356 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501); hypothetical protein complement(3677515..3678966) Isosphaera pallida ATCC 43644 10156670 YP_004179656.1 CDS Isop_2535 NC_014962.1 3679130 3679762 R COGs: COG0580 Glycerol uptake facilitator and related permease (Major Intrinsic Protein Family); InterPro IPR000425; KEGG: ote:Oter_1589 major intrinsic protein; PFAM: major intrinsic protein; SPTR: Major intrinsic protein; PFAM: Major intrinsic protein; major intrinsic protein complement(3679130..3679762) Isosphaera pallida ATCC 43644 10156671 YP_004179657.1 CDS Isop_2537 NC_014962.1 3680667 3681641 R InterPro IPR001120: IPR012902; KEGG: plm:Plim_1361 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein complement(3680667..3681641) Isosphaera pallida ATCC 43644 10156673 YP_004179658.1 CDS Isop_2538 NC_014962.1 3681904 3684603 D COGs: COG1203 helicase; InterPro IPR001650: IPR006474: IPR006483; KEGG: mba:Mbar_A3123 hypothetical protein; PFAM: helicase domain protein; SMART: helicase domain protein; SPTR: Putative uncharacterized protein; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated HD domain protein; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated helicase Cas3, Anaes-subtype; CRISPR-associated endonuclease Cas3-HD; CRISPR-associated helicase Cas3 3681904..3684603 Isosphaera pallida ATCC 43644 10156674 YP_004179659.1 CDS Isop_2539 NC_014962.1 3684600 3686738 D KEGG: tgr:Tgr7_2441 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3684600..3686738 Isosphaera pallida ATCC 43644 10156675 YP_004179660.1 CDS Isop_2540 NC_014962.1 3686731 3687750 D InterPro IPR013403; KEGG: tgr:Tgr7_2440 hypothetical protein; PFAM: CRISPR-associated protein GSU0053; SPTR: Putative uncharacterized protein; PFAM: CRISPR-associated protein GSU0053 (Cas_GSU0053); TIGRFAM: CRISPR-associated protein, GSU0053 family, N-terminal domain; CRISPR-associated protein 3686731..3687750 Isosphaera pallida ATCC 43644 10156676 YP_004179661.1 CDS Isop_2541 NC_014962.1 3687768 3689372 D InterPro IPR019089; KEGG: bts:Btus_2681 CRISPR-associated protein; PFAM: CRISPR-associated protein, GSU0054; SPTR: Putative uncharacterized protein; PFAM: CRISPR-associated protein, GSU0054 family (Cas_GSU0054); CRISPR-associated protein 3687768..3689372 Isosphaera pallida ATCC 43644 10156677 YP_004179662.1 CDS Isop_2542 NC_014962.1 3689523 3691007 D InterPro IPR000489; KEGG: psl:Psta_2634 dihydropteroate synthase DhpS; PFAM: dihydropteroate synthase DHPS; SPTR: Dihydropteroate synthase DHPS; PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase-related protein; dihydropteroate synthase DHPS 3689523..3691007 Isosphaera pallida ATCC 43644 10156678 YP_004179663.1 CDS Isop_2543 NC_014962.1 3691004 3691615 D COGs: COG2457 conserved hypothetical protein; InterPro IPR007386; KEGG: psl:Psta_2631 protein of unknown function DUF447; PFAM: protein of unknown function DUF447; SPTR: Conserved protein; PFAM: Protein of unknown function (DUF447); hypothetical protein 3691004..3691615 Isosphaera pallida ATCC 43644 10156679 YP_004179664.1 CDS Isop_2544 NC_014962.1 3691723 3692526 D KEGG: tcr:510989.60 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3691723..3692526 Isosphaera pallida ATCC 43644 10156680 YP_004179665.1 CDS Isop_2545 NC_014962.1 3692656 3693639 R KEGG: psl:Psta_4479 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1559); hypothetical protein complement(3692656..3693639) Isosphaera pallida ATCC 43644 10156681 YP_004179666.1 CDS Isop_2546 NC_014962.1 3693911 3696991 R COGs: COG3696 Putative silver efflux pump; InterPro IPR001036: IPR004763; KEGG: rba:RB11240 cation efflux system protein CZCA; PFAM: acriflavin resistance protein; SPTR: Cation efflux system protein CZCA; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); CzcA family heavy metal efflux pump complement(3693911..3696991) Isosphaera pallida ATCC 43644 10156682 YP_004179667.1 CDS Isop_2547 NC_014962.1 3696996 3698744 R COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: plm:Plim_1584 efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; SPTR: Cobalt-zinc-cadmium resistance protein; TIGRFAM: efflux transporter, RND family, MFP subunit; TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter MFP subunit complement(3696996..3698744) Isosphaera pallida ATCC 43644 10156683 YP_004179668.1 CDS Isop_2548 NC_014962.1 3698922 3699497 R KEGG: scl:sce5336 alpha/beta hydrolase fold protein; SPTR: Alpha/beta hydrolase fold protein; hypothetical protein complement(3698922..3699497) Isosphaera pallida ATCC 43644 10156684 YP_004179669.1 CDS Isop_2549 NC_014962.1 3699697 3700428 R KEGG: ote:Oter_4251 Ig family protein; SPTR: Conserved hypothetical membrane associated protein; hypothetical protein complement(3699697..3700428) Isosphaera pallida ATCC 43644 10156685 YP_004179670.1 CDS Isop_2550 NC_014962.1 3700747 3701718 R COGs: COG1078 HD superfamily phosphohydrolase; InterPro IPR006118: IPR006674: IPR003607; KEGG: bcl:ABC3321 metal-dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: Metal-dependent phosphohydrolase; PFAM: HD domain; metal dependent phosphohydrolase complement(3700747..3701718) Isosphaera pallida ATCC 43644 10156686 YP_004179671.1 CDS Isop_2551 NC_014962.1 3702255 3702617 D KEGG: rba:RB11573 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3702255..3702617 Isosphaera pallida ATCC 43644 10156687 YP_004179672.1 CDS Isop_2552 NC_014962.1 3703012 3704907 R COGs: COG0358 DNA primase; InterPro IPR002694; KEGG: fsu:Fisuc_0292 zinc finger CHC2-family protein; SPTR: Zinc finger CHC2-family protein; PFAM: CHC2 zinc finger; TIGRFAM: DNA primase, catalytic core; hypothetical protein complement(3703012..3704907) Isosphaera pallida ATCC 43644 10156688 YP_004179673.1 CDS Isop_2553 NC_014962.1 3705142 3705273 D hypothetical protein 3705142..3705273 Isosphaera pallida ATCC 43644 10156689 YP_004179674.1 CDS Isop_2554 NC_014962.1 3705458 3707611 R COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR003148: IPR006037: IPR006153; KEGG: dol:Dole_0855 sodium/hydrogen exchanger; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; TrkA-C domain protein; SPTR: Sodium/hydrogen exchanger; PFAM: TrkA-N domain; TrkA-C domain; Sodium/hydrogen exchanger family; sodium/hydrogen exchanger complement(3705458..3707611) Isosphaera pallida ATCC 43644 10156690 YP_004179675.1 CDS Isop_2555 NC_014962.1 3707719 3708732 R KEGG: ncr:NCU00388 hypothetical protein; SPTR: Putative HOS4 protein; hypothetical protein complement(3707719..3708732) Isosphaera pallida ATCC 43644 10156691 YP_004179676.1 CDS Isop_2556 NC_014962.1 3709460 3709759 R KEGG: svi:Svir_10910 predicted RND superfamily drug exporter; SPTR: Predicted RND superfamily drug exporter; hypothetical protein complement(3709460..3709759) Isosphaera pallida ATCC 43644 10156692 YP_004179677.1 CDS Isop_2557 NC_014962.1 3710645 3710986 R KEGG: rce:RC1_0935 peptidase, U32 family, putative; SPTR: Periplasmic binding protein and sugar binding domain of the LacI family protein; hypothetical protein complement(3710645..3710986) Isosphaera pallida ATCC 43644 10156693 YP_004179678.1 CDS Isop_2558 NC_014962.1 3711578 3712816 R InterPro IPR005079; KEGG: mbr:MONBRDRAFT_36634 hypothetical protein; PFAM: peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; SPTR: Putative uncharacterized protein; PFAM: Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase complement(3711578..3712816) Isosphaera pallida ATCC 43644 10156695 YP_004179679.1 CDS Isop_2559 NC_014962.1 3713161 3715089 R COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: sus:Acid_6183 sulfatase; PFAM: sulfatase; SPTR: Sulfatase; PFAM: Sulfatase; sulfatase complement(3713161..3715089) Isosphaera pallida ATCC 43644 10156696 YP_004179680.1 CDS Isop_2560 NC_014962.1 3715193 3715378 R KEGG: cbr:CBG23595 Hypothetical protein CBG23595; SPTR: Phf21b protein; hypothetical protein complement(3715193..3715378) Isosphaera pallida ATCC 43644 10156697 YP_004179681.1 CDS Isop_2561 NC_014962.1 3715585 3716727 R COGs: COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase; InterPro IPR013216; KEGG: sdl:Sdel_2220 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Putative uncharacterized protein; PFAM: Methyltransferase domain; type 11 methyltransferase complement(3715585..3716727) Isosphaera pallida ATCC 43644 10156698 YP_004179682.1 CDS Isop_2562 NC_014962.1 3717067 3717384 D KEGG: mpr:MPER_05333 hypothetical protein; SPTR: UDP-glucose:anthocysnin 5-O-glucosyltransferase; hypothetical protein 3717067..3717384 Isosphaera pallida ATCC 43644 10156699 YP_004179683.1 CDS Isop_2563 NC_014962.1 3717495 3718556 R COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: bmj:BMULJ_03600 putative glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, family 2; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase complement(3717495..3718556) Isosphaera pallida ATCC 43644 10156700 YP_004179684.1 CDS Isop_2564 NC_014962.1 3718553 3719833 R COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: rca:Rcas_3522 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Mannosyltransferase; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase complement(3718553..3719833) Isosphaera pallida ATCC 43644 10156701 YP_004179685.1 CDS Isop_2565 NC_014962.1 3719830 3721221 R KEGG: plm:Plim_0618 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1570); hypothetical protein complement(3719830..3721221) Isosphaera pallida ATCC 43644 10156702 YP_004179686.1 CDS Isop_2566 NC_014962.1 3721218 3723344 R InterPro IPR008271; KEGG: plm:Plim_0617 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family; hypothetical protein complement(3721218..3723344) Isosphaera pallida ATCC 43644 10156703 YP_004179687.1 CDS Isop_2567 NC_014962.1 3723341 3724612 R COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: pca:Pcar_2590 glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Glycosyltransferase; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase complement(3723341..3724612) Isosphaera pallida ATCC 43644 10156704 YP_004179688.1 CDS Isop_2568 NC_014962.1 3724988 3726514 R COGs: COG4198 conserved hypothetical protein; InterPro IPR008323; KEGG: psl:Psta_2002 hypothetical protein; PFAM: Uncharacterised conserved protein UCP033563; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1015); hypothetical protein complement(3724988..3726514) Isosphaera pallida ATCC 43644 10156705 YP_004179689.1 CDS Isop_2569 NC_014962.1 3726597 3727967 R COGs: COG0499 S-adenosylhomocysteine hydrolase; InterPro IPR020082: IPR000043: IPR015878; KEGG: ddf:DEFDS_1514 S-adenosyl-L-homocysteine hydrolase; PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding; S-adenosyl-L-homocysteine hydrolase; PRIAM: Adenosylhomocysteinase; SPTR: Adenosylhomocysteinase; TIGRFAM: adenosylhomocysteinase; PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase; adenosylhomocysteinase complement(3726597..3727967) Isosphaera pallida ATCC 43644 10156706 YP_004179690.1 CDS Isop_2570 NC_014962.1 3728118 3728582 R KEGG: ani:AN6864.2 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3728118..3728582) Isosphaera pallida ATCC 43644 10156707 YP_004179691.1 CDS Isop_2571 NC_014962.1 3728739 3729860 R COGs: COG0798 Arsenite efflux pump ACR3 and related permease; InterPro IPR002657: IPR004706; KEGG: nde:NIDE3708 putative arsenite resistance protein ArsB; PFAM: Bile acid:sodium symporter; SPTR: Bile acid:sodium symporter; TIGRFAM: arsenical-resistance protein; PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein; arsenical-resistance protein complement(3728739..3729860) Isosphaera pallida ATCC 43644 10156708 YP_004179692.1 CDS Isop_2572 NC_014962.1 3729975 3730664 R KEGG: chu:CHU_1515 protein-tyrosine-phosphatase; SPTR: Probable arsenate reductase; hypothetical protein complement(3729975..3730664) Isosphaera pallida ATCC 43644 10156709 YP_004179693.1 CDS Isop_2573 NC_014962.1 3730715 3730948 R InterPro IPR005243; KEGG: acp:A2cp1_1090 redox-active disulfide protein 2; SPTR: Redox-active disulfide protein 2; TIGRFAM: redox-active disulfide protein 2; TIGRFAM: small redox-active disulfide protein 2; redox-active disulfide protein 2 complement(3730715..3730948) Isosphaera pallida ATCC 43644 10156710 YP_004179694.1 CDS Isop_2574 NC_014962.1 3731028 3732353 R COGs: COG0701 permease; InterPro IPR005524; KEGG: tel:tll1886 hypothetical protein; PFAM: permease; SPTR: Tll1886 protein; PFAM: Predicted permease; permease complement(3731028..3732353) Isosphaera pallida ATCC 43644 10156711 YP_004179695.1 CDS Isop_2575 NC_014962.1 3732397 3733167 R KEGG: shw:Sputw3181_2951 cytochrome c biogenesis protein, transmembrane region; SPTR: Cytochrome c biogenesis protein, transmembrane region; PFAM: Cytochrome C biogenesis protein transmembrane region; cytochrome c biogenesis protein, transmembrane region complement(3732397..3733167) Isosphaera pallida ATCC 43644 10156712 YP_004179696.1 CDS Isop_2576 NC_014962.1 3733196 3733744 R KEGG: shn:Shewana3_2349 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3733196..3733744) Isosphaera pallida ATCC 43644 10156713 YP_004179697.1 CDS Isop_2577 NC_014962.1 3733781 3734776 R COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: nfi:NFIA_003560 UbiE/COQ5 family methyltransferase, putative; PFAM: Methyltransferase type 11; SPTR: SAM-dependent methyltransferase UbiE/COQ5 family protein; PFAM: Methyltransferase domain; type 11 methyltransferase complement(3733781..3734776) Isosphaera pallida ATCC 43644 10156714 YP_004179698.1 CDS Isop_2578 NC_014962.1 3734859 3735188 R KEGG: tpt:Tpet_1749 redox-active disulfide protein 2; SPTR: Redox-active disulfide protein 2; PFAM: Arsenical resistance operon trans-acting repressor ArsD; hypothetical protein complement(3734859..3735188) Isosphaera pallida ATCC 43644 10156715 YP_004179699.1 CDS Isop_2579 NC_014962.1 3735224 3735610 R InterPro IPR001845; KEGG: afw:Anae109_3644 regulatory protein ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Regulatory protein ArsR; PFAM: Bacterial regulatory protein, arsR family; ArsR family transcriptional regulator complement(3735224..3735610) Isosphaera pallida ATCC 43644 10156716 YP_004179700.1 CDS Isop_2580 NC_014962.1 3735912 3738566 D COGs: COG2366 Protein related to penicillin acylase; InterPro IPR002692: IPR014395; KEGG: ote:Oter_0831 penicillin amidase; PFAM: peptidase S45 penicillin amidase; SPTR: Penicillin amidase; PFAM: Penicillin amidase; peptidase S45 penicillin amidase 3735912..3738566 Isosphaera pallida ATCC 43644 10156717 YP_004179701.1 CDS Isop_2581 NC_014962.1 3739620 3740336 D COGs: COG0237 Dephospho-CoA kinase; InterPro IPR001977; KEGG: sth:STH851 dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; PRIAM: Dephospho-CoA kinase; SPTR: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; manually curated; PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; dephospho-CoA kinase 3739620..3740336 Isosphaera pallida ATCC 43644 10156718 YP_004179702.1 CDS Isop_2582 NC_014962.1 3740448 3742433 D COGs: COG1158 Transcription termination factor; InterProIPR011112: IPR011113: IPR000194: IPR011129: IPR 003593: IPR004665; KEGG: plm:Plim_3599 transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor RNA-binding; Rho termination factor domain protein; SMART: Cold shock protein; AAA ATPase; SPTR: Probable transcription termination factor; TIGRFAM: transcription termination factor Rho; PFAM: Rho termination factor, N-terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; Rho termination factor, RNA-binding domain; TIGRFAM: transcription termination factor Rho; transcription termination factor Rho 3740448..3742433 Isosphaera pallida ATCC 43644 10156719 YP_004179703.1 CDS Isop_2583 NC_014962.1 3742554 3743180 R COGs: COG0262 Dihydrofolate reductase; InterPro IPR001796: IPR017925: IPR003529: IPR012259; KEGG: aeh:Mlg_0423 dihydrofolate reductase; PFAM: dihydrofolate reductase region; PRIAM: Dihydrofolate reductase; SPTR: Dihydrofolate reductase; PFAM: Dihydrofolate reductase; Dihydrofolate reductase complement(3742554..3743180) Isosphaera pallida ATCC 43644 10156720 YP_004179704.1 CDS Isop_2584 NC_014962.1 3743231 3744544 R KEGG: hwa:HQ1193A cell surface glycoprotein; SPTR: Probable cell surface glycoprotein; hypothetical protein complement(3743231..3744544) Isosphaera pallida ATCC 43644 10156721 YP_004179705.1 CDS Isop_2585 NC_014962.1 3745096 3745380 R InterPro IPR007412; KEGG: psl:Psta_4010 anti-sigma-28 factor, FlgM; PFAM: Anti-sigma-28 factor FlgM family protein; SPTR: Anti-sigma-28 factor, FlgM; TIGRFAM: Anti-sigma-28 factor FlgM family protein; PFAM: Anti-sigma-28 factor, FlgM; TIGRFAM: flagellar biosynthesis anti-sigma factor FlgM; anti-sigma-28 factor FlgM family protein complement(3745096..3745380) Isosphaera pallida ATCC 43644 10156722 YP_004179706.1 CDS Isop_2586 NC_014962.1 3745702 3746973 R COGs: COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component; InterPro IPR003399; KEGG: tye:THEYE_A0330 mce-related protein; PFAM: Mammalian cell entry related domain protein; SPTR: Mce-related protein; PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein; mammalian cell entry domain-containing protein complement(3745702..3746973) Isosphaera pallida ATCC 43644 10156723 YP_004179707.1 CDS Isop_2588 NC_014962.1 3747930 3748463 D COGs: COG0781 Transcription termination factor; InterPro IPR006027: IPR011605; KEGG: adg:Adeg_1279 NusB antitermination factor; PFAM: NusB/RsmB/TIM44; SPTR: NusB antitermination factor; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB; NusB antitermination factor 3747930..3748463 Isosphaera pallida ATCC 43644 10156725 YP_004179708.1 CDS Isop_2589 NC_014962.1 3748469 3749431 D COGs: COG0613 metal-dependent phosphoesterase (PHP family); InterPro IPR018247: IPR004013: IPR003141; KEGG: afw:Anae109_1278 phosphotransferase domain-containing protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; SPTR: PHP domain protein; PFAM: PHP domain; PHP domain-containing protein 3748469..3749431 Isosphaera pallida ATCC 43644 10156726 YP_004179709.1 CDS Isop_2590 NC_014962.1 3749483 3750412 D COGs: COG0552 Signal recognition particle GTPase; InterPro IPR000897: IPR013822: IPR003593: IPR004390; KEGG: slp:Slip_1285 signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase; SPTR: Signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY; signal recognition particle-docking protein FtsY 3749483..3750412 Isosphaera pallida ATCC 43644 10156727 YP_004179710.1 CDS Isop_2591 NC_014962.1 3750409 3750561 R hypothetical protein complement(3750409..3750561) Isosphaera pallida ATCC 43644 10156728 YP_004179711.1 CDS Isop_2592 NC_014962.1 3750900 3752357 D COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR002078: IPR001789: IPR002197: IPR020441: IPR 003593; KEGG: dde:Dde_0109 two component Fis family transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: Two component transcriptional regulator, Fis family; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; Fis family two component sigma54 specific transcriptional regulator 3750900..3752357 Isosphaera pallida ATCC 43644 10156729 YP_004179712.1 CDS Isop_2593 NC_014962.1 3752790 3753581 R KEGG: plm:Plim_1135 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3752790..3753581) Isosphaera pallida ATCC 43644 10156730 YP_004179713.1 CDS Isop_2594 NC_014962.1 3753601 3754023 R KEGG: plm:Plim_1137 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2752); hypothetical protein complement(3753601..3754023) Isosphaera pallida ATCC 43644 10156731 YP_004179714.1 CDS Isop_2595 NC_014962.1 3754809 3756176 D COGs: COG0205 6-phosphofructokinase; InterPro IPR000023; KEGG: plm:Plim_2681 phosphofructokinase; PFAM: phosphofructokinase; SPTR: 6-phosphofructokinase I; PFAM: Phosphofructokinase; phosphofructokinase 3754809..3756176 Isosphaera pallida ATCC 43644 10156732 YP_004179715.1 CDS Isop_2596 NC_014962.1 3756308 3758215 R COGs: COG0028 Thiamine pyrophosphate-requiring protein; InterPro IPR000399: IPR012001: IPR012000: IPR011766; KEGG: rce:RC1_0235 acetolactate synthase large subunit, putative; PFAM: thiamine pyrophosphate central domain-containing protein; thiamine pyrophosphate TPP-binding domain-containing protein; SPTR: Thiamine pyrophosphate enzyme-like TPP binding protein; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; thiamine pyrophosphate central domain-containing protein complement(3756308..3758215) Isosphaera pallida ATCC 43644 10156733 YP_004179716.1 CDS Isop_2597 NC_014962.1 3758508 3759575 D COGs: COG4586 ABC-type uncharacterized transport system ATPase component; InterPro IPR003439: IPR017871: IPR003593; KEGG: psl:Psta_3780 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter, ATP-binding protein; PFAM: ABC transporter; ABC transporter-like protein 3758508..3759575 Isosphaera pallida ATCC 43644 10156734 YP_004179717.1 CDS Isop_2598 NC_014962.1 3759553 3760467 D COGs: COG4587 ABC-type uncharacterized transport system permease component; InterPro IPR010390; KEGG: psl:Psta_3885 protein of unknown function DUF990; PFAM: protein of unknown function DUF990; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF990); hypothetical protein 3759553..3760467 Isosphaera pallida ATCC 43644 10156735 YP_004179718.1 CDS Isop_2599 NC_014962.1 3760484 3761371 D COGs: COG3694 ABC-type uncharacterized transport system permease component; InterPro IPR010390; KEGG: rba:RB6337 hypothetical protein; PFAM: protein of unknown function DUF990; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF990); hypothetical protein 3760484..3761371 Isosphaera pallida ATCC 43644 10156736 YP_004179719.1 CDS Isop_2600 NC_014962.1 3761449 3762966 D COGs: COG0357 S-adenosylmethionine-dependent methyltransferase involved in cell division; InterPro IPR003682: IPR001537; KEGG: sfu:Sfum_1152 methyltransferase GidB; PFAM: glucose inhibited division protein; tRNA/rRNA methyltransferase (SpoU); SPTR: Ribosomal RNA small subunit methyltransferase G 2; TIGRFAM: methyltransferase GidB; PFAM: SpoU rRNA Methylase family; rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA methyltransferase GidB; methyltransferase GidB 3761449..3762966 Isosphaera pallida ATCC 43644 10156737 YP_004179720.1 CDS Isop_2601 NC_014962.1 3763352 3764122 D COGs: COG0622 phosphoesterase; InterPro IPR004843: IPR011152: IPR000979; KEGG: afw:Anae109_3653 phosphodiesterase; PFAM: metallophosphoesterase; SPTR: Putative serine/threonine protein phosphatase; TIGRFAM: phosphodiesterase, MJ0936 family; manually curated; PFAM: Calcineurin-like phosphoesterase; TIGRFAM: phosphoesterase, MJ0936 family; phosphodiesterase 3763352..3764122 Isosphaera pallida ATCC 43644 10156738 YP_004179721.1 CDS Isop_2602 NC_014962.1 3764213 3766774 R COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; KEGG: ccs:CCNA_02753 aminoacyl peptidase; SPTR: Peptidase, S9A/B/C family, catalytic domain protein; PFAM: Prolyl oligopeptidase family; glutamyl peptidase complement(3764213..3766774) Isosphaera pallida ATCC 43644 10156739 YP_004179722.1 CDS Isop_2603 NC_014962.1 3766969 3767382 R InterPro IPR019004; KEGG: coc:Coch_1384 hypothetical protein; SPTR: Yqey-like protein; PFAM: Yqey-like protein; hypothetical protein complement(3766969..3767382) Isosphaera pallida ATCC 43644 10156740 YP_004179723.1 CDS Isop_2604 NC_014962.1 3767616 3768176 R COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: gau:GAU_2836 Fur family transcriptional regulator; PFAM: ferric-uptake regulator; SPTR: Fur family transcriptional regulator; PFAM: Ferric uptake regulator family; Fur family ferric uptake regulator complement(3767616..3768176) Isosphaera pallida ATCC 43644 10156741 YP_004179724.1 CDS Isop_2605 NC_014962.1 3768286 3768837 D KEGG: bta:768080 transmembrane and coiled-coil domain family 2; SPTR: Transmembrane and coiled-coil domain family 2; hypothetical protein 3768286..3768837 Isosphaera pallida ATCC 43644 10156742 YP_004179725.1 CDS Isop_2606 NC_014962.1 3769038 3770474 R COGs: COG0114 Fumarase; InterPro IPR020557: IPR000362: IPR018951: IPR005677; KEGG: syn:slr0018 fumarate hydratase; PFAM: fumarate lyase; Fumarase C-like; SPTR: Fumarate hydratase class II; TIGRFAM: fumarate hydratase, class II; PFAM: Fumarase C C-terminus; Lyase; TIGRFAM: fumarate hydratase, class II; fumarase complement(3769038..3770474) Isosphaera pallida ATCC 43644 10156743 YP_004179726.1 CDS Isop_2607 NC_014962.1 3770533 3771471 R InterPro IPR013216; KEGG: sdl:Sdel_2220 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Putative uncharacterized protein; PFAM: Methyltransferase domain; type 11 methyltransferase complement(3770533..3771471) Isosphaera pallida ATCC 43644 10156744 YP_004179727.1 CDS Isop_2608 NC_014962.1 3771468 3772304 R COGs: COG1214 Inactive homolog of metal-dependent protease putative molecular chaperone; InterPro IPR000905; KEGG: plm:Plim_1236 peptidase M22 glycoprotease; PFAM: peptidase M22 glycoprotease; SPTR: Peptidase M22 glycoprotease; PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ; peptidase M22 glycoprotease complement(3771468..3772304) Isosphaera pallida ATCC 43644 10156745 YP_004179728.1 CDS Isop_2609 NC_014962.1 3772491 3773306 D InterPro IPR004843: IPR011152; KEGG: plm:Plim_1711 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: Probable phosphoesterase PH1616; PFAM: Calcineurin-like phosphoesterase; metallophosphoesterase 3772491..3773306 Isosphaera pallida ATCC 43644 10156746 YP_004179729.1 CDS Isop_2610 NC_014962.1 3773711 3775957 D COGs: COG0706 Preprotein translocase subunit YidC; InterPro IPR001708: IPR019998: IPR020001; KEGG: plm:Plim_1710 60 kDa inner membrane insertion protein; PFAM: 60 kDa inner membrane insertion protein; SPTR: Putative uncharacterized protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; membrane protein insertase, YidC/Oxa1 family domain containing; PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain; membrane protein insertase, YidC/Oxa1 family, N-terminal domain; YidC/Oxa1 family membrane protein insertase 3773711..3775957 Isosphaera pallida ATCC 43644 10156747 YP_004179730.1 CDS Isop_2611 NC_014962.1 3776156 3776851 D InterPro IPR017969: IPR010496; KEGG: psl:Psta_2463 protein of unknown function DUF1080; PFAM: protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF1080); hypothetical protein 3776156..3776851 Isosphaera pallida ATCC 43644 10156748 YP_004179731.1 CDS Isop_2612 NC_014962.1 3776976 3777506 R COGs: COG0693 Putative intracellular protease/amidase; InterPro IPR006286: IPR002818; KEGG: sus:Acid_5493 PfpI family intracellular peptidase; PFAM: ThiJ/PfpI domain-containing protein; SPTR: Intracellular protease, PfpI family; TIGRFAM: intracellular protease, PfpI family; PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease, PfpI family; PfpI familyintracellular protease complement(3776976..3777506) Isosphaera pallida ATCC 43644 10156749 YP_004179732.1 CDS Isop_2613 NC_014962.1 3777586 3778680 R COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: plm:Plim_0206 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Probable oxidoreductase; PFAM: NAD dependent epimerase/dehydratase family; NAD-dependent epimerase/dehydratase complement(3777586..3778680) Isosphaera pallida ATCC 43644 10156750 YP_004179733.1 CDS Isop_2614 NC_014962.1 3778884 3779861 R COGs: COG0176 Transaldolase; InterPro IPR018225: IPR001585: IPR004730; KEGG: alv:Alvin_2311 transaldolase; PFAM: Transaldolase; SPTR: Transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase; TIGRFAM: transaldolase; transaldolase complement(3778884..3779861) Isosphaera pallida ATCC 43644 10156751 YP_004179734.1 CDS Isop_2615 NC_014962.1 3779957 3781585 R COGs: COG0166 Glucose-6-phosphate isomerase; InterPro IPR018189: IPR000169: IPR001672; KEGG: mxa:MXAN_6908 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI); SPTR: Glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase; glucose-6-phosphate isomerase complement(3779957..3781585) Isosphaera pallida ATCC 43644 10156752 YP_004179735.1 CDS Isop_2616 NC_014962.1 3781859 3782434 D KEGG: ank:AnaeK_1001 cytochrome bd ubiquinol oxidase subunit II; SPTR: Cytochrome bd ubiquinol oxidase subunit II; hypothetical protein 3781859..3782434 Isosphaera pallida ATCC 43644 10156753 YP_004179736.1 CDS Isop_2617 NC_014962.1 3782627 3783505 D COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: plm:Plim_3131 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Probable tolQ protein; PFAM: MotA/TolQ/ExbB proton channel family; MotA/TolQ/ExbB proton channel 3782627..3783505 Isosphaera pallida ATCC 43644 10156754 YP_004179737.1 CDS Isop_2618 NC_014962.1 3783704 3784195 D InterPro IPR003400; KEGG: plm:Plim_3761 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 3783704..3784195 Isosphaera pallida ATCC 43644 10156755 YP_004179738.1 CDS Isop_2619 NC_014962.1 3784389 3784859 D InterPro IPR003400; KEGG: plm:Plim_3133 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR 3784389..3784859 Isosphaera pallida ATCC 43644 10156756 YP_004179739.1 CDS Isop_2620 NC_014962.1 3784966 3785952 D KEGG: plm:Plim_3759 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3784966..3785952 Isosphaera pallida ATCC 43644 10156757 YP_004179740.1 CDS Isop_2621 NC_014962.1 3786104 3786400 R KEGG: fgr:FG02805.1 hypothetical protein; SPTR: Protocadherin gamma a7 isoform; hypothetical protein complement(3786104..3786400) Isosphaera pallida ATCC 43644 10156758 YP_004179741.1 CDS Isop_2622 NC_014962.1 3786583 3788898 D InterPro IPR019775; KEGG: hmg:100215998 hypothetical protein LOC100215998; SPTR: Minus agglutinin; hypothetical protein 3786583..3788898 Isosphaera pallida ATCC 43644 10156759 YP_004179742.1 CDS Isop_2623 NC_014962.1 3789543 3791786 D COGs: COG0793 Periplasmic protease; InterPro IPR001478: IPR005151: IPR004447; KEGG: psl:Psta_4163 carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; PRIAM: C-terminal processing peptidase; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; SPTR: Periplasmic tail-specific proteinase; TIGRFAM: carboxyl-terminal protease; PFAM: C-terminal domain of tail specific protease (DUF3340); Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); carboxyl-terminal protease 3789543..3791786 Isosphaera pallida ATCC 43644 10156760 YP_004179743.1 CDS Isop_2624 NC_014962.1 3792122 3794242 D COGs: COG0793 Periplasmic protease; InterPro IPR001478: IPR005151: IPR004447; KEGG: psl:Psta_4163 carboxyl-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; PRIAM: C-terminal processing peptidase; SMART: peptidase S41; PDZ/DHR/GLGF domain protein; SPTR: Periplasmic tail-specific proteinase; TIGRFAM: carboxyl-terminal protease; PFAM: C-terminal domain of tail specific protease (DUF3340); Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); carboxyl-terminal protease 3792122..3794242 Isosphaera pallida ATCC 43644 10156761 YP_004179744.1 CDS Isop_2625 NC_014962.1 3794344 3795258 R InterPro IPR007627: IPR013249: IPR014284; KEGG: nca:Noca_0767 FliA/WhiG family RNA polymerase sigma factor; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; SPTR: RNA polymerase sigma factor, FliA/WhiG family; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 familyRNA polymerase sigma factor complement(3794344..3795258) Isosphaera pallida ATCC 43644 10156762 YP_004179745.1 CDS Isop_2626 NC_014962.1 3795403 3796509 D KEGG: plm:Plim_1469 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3795403..3796509 Isosphaera pallida ATCC 43644 10156763 YP_004179746.1 CDS Isop_2627 NC_014962.1 3796608 3797825 R KEGG: tva:TVAG_007500 viral A-type inclusion protein; SPTR: Viral A-type inclusion protein, putative; hypothetical protein complement(3796608..3797825) Isosphaera pallida ATCC 43644 10156764 YP_004179747.1 CDS Isop_2628 NC_014962.1 3797819 3799837 R KEGG: amd:AMED_4814 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3797819..3799837) Isosphaera pallida ATCC 43644 10156765 YP_004179748.1 CDS Isop_2629 NC_014962.1 3799824 3801938 R KEGG: tgu:100218739 hypothetical protein LOC100218739; SPTR: Putative uncharacterized protein; hypothetical protein complement(3799824..3801938) Isosphaera pallida ATCC 43644 10156766 YP_004179749.1 CDS Isop_2630 NC_014962.1 3802446 3803357 D KEGG: cyb:CYB_1139 TonB family protein; SPTR: TonB family protein; hypothetical protein 3802446..3803357 Isosphaera pallida ATCC 43644 10156767 YP_004179750.1 CDS Isop_2631 NC_014962.1 3803526 3803666 R KEGG: tgu:100221410 similar to RIKEN cDNA 2900083I11; hypothetical protein complement(3803526..3803666) Isosphaera pallida ATCC 43644 10156768 YP_004179751.1 CDS Isop_2632 NC_014962.1 3804047 3804334 R InterPro IPR003749: IPR010034; KEGG: psl:Psta_2343 thiamineS protein; PFAM: thiamineS protein; SPTR: ThiamineS protein; TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: ThiS family; TIGRFAM: molybdopterin converting factor, subunit 1, non-archaeal; molybdopterin converting factor subunit 1 complement(3804047..3804334) Isosphaera pallida ATCC 43644 10156769 YP_004179752.1 CDS Isop_2633 NC_014962.1 3804378 3806849 R COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR002469; KEGG: gau:GAU_3554 putative dipeptidyl peptidase; PFAM: peptidase S9B dipeptidylpeptidase IV domain protein; SPTR: Peptidase S9 prolyl oligopeptidase active site domain protein; PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region; peptidase S9B dipeptidylpeptidase IV domain-containing protein complement(3804378..3806849) Isosphaera pallida ATCC 43644 10156770 YP_004179753.1 CDS Isop_2634 NC_014962.1 3807183 3808610 R COGs: COG1850 Ribulose 1 5-bisphosphate carboxylase large subunit; KEGG: dac:Daci_5642 ribulose-bisphosphate carboxylase; SPTR: Ribulose-bisphosphate carboxylase; PFAM: Ribulose bisphosphate carboxylase large chain, catalytic domain; hypothetical protein complement(3807183..3808610) Isosphaera pallida ATCC 43644 10156771 YP_004179754.1 CDS Isop_2635 NC_014962.1 3808825 3809271 D COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: adg:Adeg_1011 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Two component transcriptional regulator, winged helix family; PFAM: Response regulator receiver domain; response regulator receiver protein 3808825..3809271 Isosphaera pallida ATCC 43644 10156772 YP_004179755.1 CDS Isop_2636 NC_014962.1 3809271 3811640 D COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR010822: IPR003594: IPR001932; KEGG: cli:Clim_1832 putative PAS/PAC sensor protein; PFAM: Stage II sporulation protein E; ATP-binding region ATPase domain protein; SMART: protein phosphatase 2C domain protein; SPTR: Putative PAS/PAC sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Stage II sporulation protein E (SpoIIE); protein serine/threonine phosphatase 3809271..3811640 Isosphaera pallida ATCC 43644 10156773 YP_004179756.1 CDS Isop_2637 NC_014962.1 3811802 3812137 D COGs: COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); InterPro IPR002645: IPR003658; KEGG: lhk:LHK_00821 anti-sigma-factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; anti-sigma-factor antagonist 3811802..3812137 Isosphaera pallida ATCC 43644 10156774 YP_004179757.1 CDS Isop_2638 NC_014962.1 3812227 3813369 R KEGG: caa:Caka_2962 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: ParB-like nuclease domain; hypothetical protein complement(3812227..3813369) Isosphaera pallida ATCC 43644 10156775 YP_004179758.1 CDS Isop_2639 NC_014962.1 3813617 3814519 D COGs: COG1091 dTDP-4-dehydrorhamnose reductase; InterPro IPR001412: IPR001509; KEGG: gvi:glr3121 methionine adenosyltransferase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Glr3121 protein; PFAM: RmlD substrate binding domain; TIGRFAM: dTDP-4-dehydrorhamnose reductase; NAD-dependent epimerase/dehydratase 3813617..3814519 Isosphaera pallida ATCC 43644 10156776 YP_004179759.1 CDS Isop_2640 NC_014962.1 3814824 3815318 D COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: psl:Psta_2761 transcriptional regulator, BadM/Rrf2 family; PFAM: protein of unknown function UPF0074; SPTR: Putative uncharacterized protein; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: Transcriptional regulator; TIGRFAM: rrf2 family protein (putative transcriptional regulator); BadM/Rrf2 family transcriptional regulator 3814824..3815318 Isosphaera pallida ATCC 43644 10156777 YP_004179760.1 CDS Isop_2641 NC_014962.1 3815794 3817752 D COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR020845: IPR000873: IPR011904; KEGG: aba:Acid345_3520 acetyl-coenzyme A synthetase; PFAM: AMP-dependent synthetase and ligase; SPTR: Acetyl-coenzyme A synthetase; TIGRFAM: acetate/CoA ligase; PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetate--CoA ligase; acetyl-coenzyme A synthetase 3815794..3817752 Isosphaera pallida ATCC 43644 10156778 YP_004179761.1 CDS Isop_2642 NC_014962.1 3817879 3819201 D KEGG: psl:Psta_0185 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3817879..3819201 Isosphaera pallida ATCC 43644 10156779 YP_004179762.1 CDS Isop_2643 NC_014962.1 3819388 3820773 D InterPro IPR000866; KEGG: psl:Psta_0186 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: AhpC/TSA family; alkyl hydroperoxide reductase 3819388..3820773 Isosphaera pallida ATCC 43644 10156780 YP_004179763.1 CDS Isop_2644 NC_014962.1 3820814 3821980 R KEGG: tbi:Tbis_2730 helicase domain-containing protein; SPTR: Helicase domain protein; hypothetical protein complement(3820814..3821980) Isosphaera pallida ATCC 43644 10156781 YP_004179764.1 CDS Isop_2645 NC_014962.1 3822121 3822819 D KEGG: bfu:BC1G_09600 hypothetical protein; hypothetical protein 3822121..3822819 Isosphaera pallida ATCC 43644 10156782 YP_004179765.1 CDS Isop_2646 NC_014962.1 3822910 3823602 R InterPro IPR000387: IPR000340; KEGG: olu:OSTLU_7942 predicted protein; PFAM: Dual specificity protein phosphatase; SPTR: Predicted protein; PFAM: Dual specificity phosphatase, catalytic domain; Dual specificity protein phosphatase complement(3822910..3823602) Isosphaera pallida ATCC 43644 10156783 YP_004179766.1 CDS Isop_2647 NC_014962.1 3823638 3825473 R InterPro IPR000834; KEGG: psl:Psta_3804 peptidase M14 carboxypeptidase A; PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; SPTR: Peptidase M14, carboxypeptidase A; PFAM: Zinc carboxypeptidase; peptidase M14 carboxypeptidase A complement(3823638..3825473) Isosphaera pallida ATCC 43644 10156784 YP_004179767.1 CDS Isop_2648 NC_014962.1 3825620 3827701 R InterPro IPR000834; KEGG: psl:Psta_3805 peptidase M14 carboxypeptidase A; PFAM: peptidase M14 carboxypeptidase A; SPTR: Peptidase M14 carboxypeptidase A; PFAM: Zinc carboxypeptidase; peptidase M14 carboxypeptidase A complement(3825620..3827701) Isosphaera pallida ATCC 43644 10156785 YP_004179768.1 CDS Isop_2649 NC_014962.1 3828085 3828321 D KEGG: mex:Mext_3570 O-antigen polymerase; SPTR: Putative uncharacterized protein; hypothetical protein 3828085..3828321 Isosphaera pallida ATCC 43644 10156786 YP_004179769.1 CDS Isop_2650 NC_014962.1 3828481 3830082 R COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR006805: IPR015890: IPR019999: IPR005802; KEGG: mta:Moth_2108 aminodeoxychorismate synthase, subunit I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; PRIAM: Anthranilate synthase; SPTR: Aminodeoxychorismate synthase, subunit I; TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: chorismate binding enzyme; Anthranilate synthase component I, N terminal region; TIGRFAM: aminodeoxychorismate synthase, component I, bacterial clade; para-aminobenzoate synthase subunit I complement(3828481..3830082) Isosphaera pallida ATCC 43644 10156787 YP_004179770.1 CDS Isop_2651 NC_014962.1 3830139 3833069 R InterPro IPR019734: IPR013026: IPR001440; KEGG: plm:Plim_4208 tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3830139..3833069) Isosphaera pallida ATCC 43644 10156788 YP_004179771.1 CDS Isop_2652 NC_014962.1 3833309 3834097 R COGs: COG3828 conserved hypothetical protein; KEGG: sus:Acid_5410 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Trehalose utilisation; hypothetical protein complement(3833309..3834097) Isosphaera pallida ATCC 43644 10156789 YP_004179772.1 CDS Isop_2653 NC_014962.1 3834279 3837221 R COGs: COG3387 Glucoamylase and related glycosyl hydrolase; KEGG: tjr:TherJR_2725 glycoside hydrolase 15-related protein; SPTR: Glycoside hydrolase 15-related protein; hypothetical protein complement(3834279..3837221) Isosphaera pallida ATCC 43644 10156790 YP_004179773.1 CDS Isop_2654 NC_014962.1 3837712 3839580 D KEGG: nwa:Nwat_1803 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3837712..3839580 Isosphaera pallida ATCC 43644 10156791 YP_004179774.1 CDS Isop_2655 NC_014962.1 3839958 3840491 D COGs: COG0720 6-pyruvoyl-tetrahydropterin synthase; InterPro IPR007115; KEGG: plm:Plim_2408 hypothetical protein; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: 6-pyruvoyl tetrahydropterin synthase; hypothetical protein 3839958..3840491 Isosphaera pallida ATCC 43644 10156792 YP_004179775.1 CDS Isop_2656 NC_014962.1 3840662 3842110 D COGs: COG1029 Formylmethanofuran dehydrogenase subunit B; KEGG: plm:Plim_2299 formylmethanofuran dehydrogenase subunit B-like protein; SPTR: Formyltransferase/hydrolase complex subunit B; hypothetical protein 3840662..3842110 Isosphaera pallida ATCC 43644 10156793 YP_004179776.1 CDS Isop_2657 NC_014962.1 3842211 3843422 D KEGG: har:HEAR1234 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3842211..3843422 Isosphaera pallida ATCC 43644 10156794 YP_004179777.1 CDS Isop_2658 NC_014962.1 3843474 3844526 R COGs: COG1409 phosphohydrolase; InterPro IPR004843; KEGG: ade:Adeh_0989 metallophosphoesterase; PFAM: metallophosphoesterase; SPTR: Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase; metallophosphoesterase complement(3843474..3844526) Isosphaera pallida ATCC 43644 10156795 YP_004179778.1 CDS Isop_2659 NC_014962.1 3845219 3846748 D COGs: COG0516 IMP dehydrogenase/GMP reductase; InterProIPR000644: IPR015875: IPR001093: IPR018529: IPR 005990; KEGG: psl:Psta_4277 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein; PRIAM: IMP dehydrogenase; SMART: CBS domain containing protein; SPTR: Inosine-5-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase; inosine-5'-monophosphate dehydrogenase 3845219..3846748 Isosphaera pallida ATCC 43644 10156796 YP_004179779.1 CDS Isop_2660 NC_014962.1 3846781 3848148 R COGs: COG3004 Na+/H+ antiporter; InterPro IPR004670; KEGG: plm:Plim_1649 Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter NhaA; SPTR: Na+/H+ antiporter NhaA; TIGRFAM: Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter 1; TIGRFAM: Na+/H+ antiporter NhaA; TC 2.A.33.1.1; NhaA family sodium/proton antiporter complement(3846781..3848148) Isosphaera pallida ATCC 43644 10156797 YP_004179780.1 CDS Isop_2661 NC_014962.1 3848245 3850044 R COGs: COG3387 Glucoamylase and related glycosyl hydrolase; InterPro IPR011613; KEGG: scl:sce1562 glycosyl hydrolase; PFAM: glycoside hydrolase 15-related; SPTR: Glycoside hydrolase 15-related protein; PFAM: Glycosyl hydrolases family 15; glycoside hydrolase 15-like protein complement(3848245..3850044) Isosphaera pallida ATCC 43644 10156798 YP_004179781.1 CDS Isop_2662 NC_014962.1 3850273 3851445 R COGs: COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis; InterPro IPR004588: IPR016425; KEGG: tpd:Teth39_1216 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PFAM: IspG family protein; SPTR: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase complement(3850273..3851445) Isosphaera pallida ATCC 43644 10156799 YP_004179782.1 CDS Isop_2663 NC_014962.1 3851716 3853344 R KEGG: csa:Csal_0765 nucleoside:H+ symporter; SPTR: Putative uncharacterized protein; PFAM: Nucleoside H+ symporter; TIGRFAM: nucleoside transporter; hypothetical protein complement(3851716..3853344) Isosphaera pallida ATCC 43644 10156800 YP_004179783.1 CDS Isop_2664 NC_014962.1 3854042 3855928 R KEGG: lma:LmjF34.0690 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3854042..3855928) Isosphaera pallida ATCC 43644 10156801 YP_004179784.1 CDS Isop_2665 NC_014962.1 3856424 3858715 D COGs: COG1297 membrane protein; InterPro IPR004813: IPR004814; KEGG: ote:Oter_4609 OPT family oligopeptide transporter; PFAM: Oligopeptide transporter OPT superfamily protein; SPTR: Oligopeptide transporter, OPT family; TIGRFAM: oligopeptide transporter, OPT family; oligopeptide transporters, OPT superfamily; PFAM: OPT oligopeptide transporter protein; TIGRFAM: putative oligopeptide transporter, OPT family; oligopeptide transporters, OPT superfamily; oligopeptide transporter 3856424..3858715 Isosphaera pallida ATCC 43644 10156802 YP_004179785.1 CDS Isop_2666 NC_014962.1 3858720 3859082 D KEGG: sli:Slin_5931 leucine-rich repeat, ribonuclease inhibitor subtype; SPTR: Putative regulatory subunit; hypothetical protein 3858720..3859082 Isosphaera pallida ATCC 43644 10156803 YP_004179786.1 CDS Isop_2667 NC_014962.1 3859240 3860802 R COGs: COG4287 PhoPQ-activated pathogenicity-related protein; InterPro IPR009199; KEGG: sus:Acid_2416 PhoPQ-activated pathogenicity-related protein; PFAM: PhoPQ-activated pathogenicity-related protein PqaA type; SPTR: PhoPQ-activated pathogenicity-related protein; PFAM: PhoPQ-activated pathogenicity-related protein; PhoPQ-activated pathogenicity-like protein PqaA type complement(3859240..3860802) Isosphaera pallida ATCC 43644 10156804 YP_004179787.1 CDS Isop_2668 NC_014962.1 3861019 3861396 R KEGG: bpm:BURPS1710b_A1559 LysE family protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3861019..3861396) Isosphaera pallida ATCC 43644 10156805 YP_004179788.1 CDS Isop_2669 NC_014962.1 3861514 3863079 D COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891: IPR002034: IPR013709: IPR005671; KEGG: psl:Psta_4375 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain-containing protein; SPTR: 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: HMGL-like; LeuA allosteric (dimerisation) domain; TIGRFAM: 2-isopropylmalate synthase, bacterial type; 2-isopropylmalate synthase 3861514..3863079 Isosphaera pallida ATCC 43644 10156806 YP_004179789.1 CDS Isop_2670 NC_014962.1 3863190 3864935 R COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterProIPR001949: IPR002023: IPR011538: IPR019554: IPR 019575; KEGG: mno:Mnod_8359 respiratory-chain NADH dehydrogenase domain 51 kDa subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH dehydrogenase (ubiquinone) 24 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; SPTR: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; NAD-dependent formate dehydrogenase flavoprotein subunit complement(3863190..3864935) Isosphaera pallida ATCC 43644 10156807 YP_004179790.1 CDS Isop_2671 NC_014962.1 3865013 3865579 R InterPro IPR020084: IPR000086: IPR020476; KEGG: sti:Sthe_1370 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: NUDIX hydrolase; PFAM: NUDIX domain; NUDIX hydrolase complement(3865013..3865579) Isosphaera pallida ATCC 43644 10156808 YP_004179791.1 CDS Isop_2672 NC_014962.1 3865695 3866150 R COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016: IPR006015; KEGG: plm:Plim_2355 UspA domain protein; PFAM: UspA domain-containing protein; SPTR: UspA domain protein; PFAM: Universal stress protein family; UspA domain-containing protein complement(3865695..3866150) Isosphaera pallida ATCC 43644 10156809 YP_004179792.1 CDS Isop_2673 NC_014962.1 3866332 3866895 R KEGG: ath:AT1G68690 ATP binding / protein kinase/ protein serine/threonine kinase; SPTR: F24J5.8 protein; hypothetical protein complement(3866332..3866895) Isosphaera pallida ATCC 43644 10156810 YP_004179793.1 CDS Isop_2674 NC_014962.1 3867273 3868202 R COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR018300: IPR001544: IPR005785; KEGG: psl:Psta_0643 branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; PRIAM: D-amino-acid transaminase; SPTR: Branched-chain amino acid aminotransferase; TIGRFAM: branched-chain amino acid aminotransferase; PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group I; D-amino acid aminotransferase; branched chain amino acid aminotransferase apoenzyme complement(3867273..3868202) Isosphaera pallida ATCC 43644 10156811 YP_004179794.1 CDS Isop_2675 NC_014962.1 3868339 3869058 R COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439: IPR015854: IPR017871: IPR003593; KEGG: plm:Plim_2517 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter; ABC transporter-like protein complement(3868339..3869058) Isosphaera pallida ATCC 43644 10156812 YP_004179795.1 CDS Isop_2676 NC_014962.1 3869317 3870777 R COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: psl:Psta_0645 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; PFAM: Predicted permease; hypothetical protein complement(3869317..3870777) Isosphaera pallida ATCC 43644 10156813 YP_004179796.1 CDS Isop_2677 NC_014962.1 3870940 3872703 R COGs: COG1190 Lysyl-tRNA synthetase (class II); InterProIPR006195: IPR004365: IPR004364: IPR018149: IPR 002313; KEGG: psl:Psta_0647 lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; SPTR: Lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; lysyl-tRNA synthetase complement(3870940..3872703) Isosphaera pallida ATCC 43644 10156814 YP_004179797.1 CDS Isop_2678 NC_014962.1 3873017 3874306 D InterPro IPR009056: IPR013427; KEGG: plm:Plim_2734 membrane-bound dehydrogenase domain protein; SPTR: Heme-binding protein; TIGRFAM: heme-binding protein; PFAM: Cytochrome c; TIGRFAM: putative heme-binding domain, Pirellula/Verrucomicrobium type; heme-binding protein 3873017..3874306 Isosphaera pallida ATCC 43644 10156815 YP_004179798.1 CDS Isop_2680 NC_014962.1 3876083 3876931 D KEGG: rme:Rmet_5987 negative regulation of plasmid gene expression transcriptional repressor activity; SPTR: Negative regulation of plasmid gene expression transcriptional repressor activity; hypothetical protein 3876083..3876931 Isosphaera pallida ATCC 43644 10156817 YP_004179799.1 CDS Isop_2681 NC_014962.1 3876928 3877743 D InterPro IPR005135; KEGG: sal:Sala_1018 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/Exonuclease/phosphatase family; endonuclease/exonuclease/phosphatase 3876928..3877743 Isosphaera pallida ATCC 43644 10156818 YP_004179800.1 CDS Isop_2682 NC_014962.1 3878068 3879990 D COGs: COG2340 Uncharacterized protein with SCP/PR1 domains; InterPro IPR014044: IPR003644; KEGG: dal:Dalk_4321 hypothetical protein; PFAM: Na-Ca exchanger/integrin-beta4; SCP-like extracellular; SMART: Na-Ca exchanger/integrin-beta4; SPTR: SCP-like extracellular protein, putative; PFAM: Cysteine-rich secretory protein family; Calx-beta domain; Na-Ca exchanger/integrin-beta4 3878068..3879990 Isosphaera pallida ATCC 43644 10156819 YP_004179801.1 CDS Isop_2683 NC_014962.1 3880135 3881826 R KEGG: tmz:Tmz1t_0364 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3880135..3881826) Isosphaera pallida ATCC 43644 10156820 YP_004179802.1 CDS Isop_2684 NC_014962.1 3882295 3882828 R KEGG: hoh:Hoch_5342 response regulator receiver; SPTR: p150 dynactin NUDM; PFAM: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; hypothetical protein complement(3882295..3882828) Isosphaera pallida ATCC 43644 10156821 YP_004179803.1 CDS Isop_2685 NC_014962.1 3883194 3884372 D COGs: COG0404 Glycine cleavage system T protein (aminomethyltransferase); InterPro IPR006222: IPR013977: IPR006223; KEGG: plm:Plim_2455 glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; SPTR: Aminomethyltransferase; TIGRFAM: glycine cleavage system T protein; PFAM: Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; TIGRFAM: glycine cleavage system T protein; glycine cleavage system T protein 3883194..3884372 Isosphaera pallida ATCC 43644 10156822 YP_004179804.1 CDS Isop_2686 NC_014962.1 3884529 3884915 D COGs: COG0509 Glycine cleavage system H protein (lipoate-binding); InterPro IPR003016: IPR002930: IPR017453; KEGG: mch:Mchl_0813 glycine cleavage system protein H; PFAM: glycine cleavage H-protein; SPTR: Glycine cleavage system H protein; TIGRFAM: glycine cleavage system H protein; PFAM: Glycine cleavage H-protein; TIGRFAM: glycine cleavage system H protein; glycine cleavage system H protein 3884529..3884915 Isosphaera pallida ATCC 43644 10156823 YP_004179805.1 CDS Isop_2687 NC_014962.1 3885145 3886512 D COGs: COG0403 Glycine cleavage system protein P (pyridoxal-binding) N-terminal domain; InterPro IPR020580; KEGG: psl:Psta_4671 glycine dehydrogenase (decarboxylating); PFAM: Glycine cleavage system P-protein-like; PRIAM: Glycine dehydrogenase (decarboxylating); SPTR: Glycine dehydrogenase subunit 1; PFAM: Glycine cleavage system P-protein; glycine dehydrogenase subunit alpha 3885145..3886512 Isosphaera pallida ATCC 43644 10156824 YP_004179806.1 CDS Isop_2688 NC_014962.1 3886656 3888737 D KEGG: rba:RB6045 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3886656..3888737 Isosphaera pallida ATCC 43644 10156825 YP_004179807.1 CDS Isop_2689 NC_014962.1 3888764 3889489 R InterPro IPR006342; KEGG: sfu:Sfum_3336 hypothetical protein; SPTR: Methyltransferase FkbM family; TIGRFAM: methyltransferase FkbM family; TIGRFAM: methyltransferase, FkbM family; FkbM family methyltransferase complement(3888764..3889489) Isosphaera pallida ATCC 43644 10156826 YP_004179808.1 CDS Isop_2690 NC_014962.1 3889486 3891192 R COGs: COG4242 Cyanophycinase and related exopeptidase; InterPro IPR005320: IPR011811; KEGG: plm:Plim_2775 cyanophycinase; PFAM: peptidase S51 dipeptidase E; SPTR: Cyanophycinase; TIGRFAM: cyanophycinase; PFAM: Peptidase family S51; TIGRFAM: cyanophycinase; cyanophycinase complement(3889486..3891192) Isosphaera pallida ATCC 43644 10156827 YP_004179809.1 CDS Isop_2691 NC_014962.1 3891269 3892567 R COGs: COG0172 Seryl-tRNA synthetase; InterProIPR006195: IPR015866: IPR002314: IPR018156: IPR 002317; KEGG: rxy:Rxyl_1086 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like; PRIAM: Serine--tRNA ligase; SPTR: Seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II core domain (G, H, P, S and T); Seryl-tRNA synthetase N-terminal domain; TIGRFAM: seryl-tRNA synthetase; seryl-tRNA synthetase complement(3891269..3892567) Isosphaera pallida ATCC 43644 10156828 YP_004179810.1 CDS Isop_2692 NC_014962.1 3892771 3894168 R COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933: IPR011650; KEGG: psl:Psta_2407 peptidase M20; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: ArgE/DapE/Acy1 family protein; PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; peptidase M20 complement(3892771..3894168) Isosphaera pallida ATCC 43644 10156829 YP_004179811.1 CDS Isop_2693 NC_014962.1 3894401 3895504 D COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR011611; KEGG: tfu:Tfu_0259 ribokinase; PFAM: PfkB domain protein; SPTR: Putative RbsK, Carbohydrate kinase, ribokinase family protein; PFAM: pfkB family carbohydrate kinase; PfkB domain-containing protein 3894401..3895504 Isosphaera pallida ATCC 43644 10156830 YP_004179812.1 CDS Isop_2694 NC_014962.1 3895509 3896786 D KEGG: xcv:XCV3229 two-component system sensor histidine kinase-response regulator hybrid protein PilL; SPTR: Two-component system sensor histidine kinase-response regulator hybrid protein PilL; hypothetical protein 3895509..3896786 Isosphaera pallida ATCC 43644 10156831 YP_004179813.1 CDS Isop_2695 NC_014962.1 3896966 3899533 R COGs: COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase; InterProIPR014021: IPR001650: IPR011545: IPR014001: IPR 005259; KEGG: psl:Psta_4653 primosomal protein N'; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: Primosomal protein N'; TIGRFAM: primosomal protein N'; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: primosomal protein N'; primosomal protein N' complement(3896966..3899533) Isosphaera pallida ATCC 43644 10156832 YP_004179814.1 CDS Isop_2696 NC_014962.1 3899826 3900485 D COGs: COG1057 Nicotinic acid mononucleotide adenylyltransferase; InterPro IPR004820: IPR005248: IPR004821; KEGG: psl:Psta_3763 nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase; PRIAM: Nicotinate-nucleotide adenylyltransferase; SPTR: Probable nicotinate-nucleotide adenylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain; nicotinate (nicotinamide) nucleotide adenylyltransferase 3899826..3900485 Isosphaera pallida ATCC 43644 10156833 YP_004179815.1 CDS Isop_2697 NC_014962.1 3900741 3901337 R COGs: COG0350 Methylated DNA-protein cysteine methyltransferase; InterPro IPR001497: IPR014048; KEGG: afw:Anae109_3549 methylated-DNA--protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; SPTR: Methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase; methylated-DNA--protein-cysteine methyltransferase complement(3900741..3901337) Isosphaera pallida ATCC 43644 10156834 YP_004179816.1 CDS Isop_2698 NC_014962.1 3901752 3903206 D COGs: COG1760 L-serine deaminase; InterPro IPR005131: IPR005130: IPR004644; KEGG: mpt:Mpe_A1429 L-serine ammonia-lyase; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; SPTR: L-serine ammonia-lyase; TIGRFAM: L-serine dehydratase 1; PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, single chain form; L-serine ammonia-lyase 3901752..3903206 Isosphaera pallida ATCC 43644 10156835 YP_004179817.1 CDS Isop_2699 NC_014962.1 3903227 3903415 D hypothetical protein 3903227..3903415 Isosphaera pallida ATCC 43644 10156836 YP_004179818.1 CDS Isop_2700 NC_014962.1 3903519 3905207 R COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR001763: IPR013027: IPR004099; KEGG: psl:Psta_1619 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Rhodanese-like domain; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(3903519..3905207) Isosphaera pallida ATCC 43644 10156837 YP_004179819.1 CDS Isop_2701 NC_014962.1 3905540 3906736 R COGs: COG0530 Ca2+/Na+ antiporter; InterPro IPR004837: IPR004481; KEGG: pmy:Pmen_0851 CaCA family Na(+)/Ca(+) antiporter; PFAM: sodium/calcium exchanger membrane region; SPTR: Na+/Ca+ antiporter, CaCA family; TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: Sodium/calcium exchanger protein; TIGRFAM: calcium/proton exchanger (cax); K+-dependent Na+/Ca+ exchanger related-protein; CaCA family Na+/Ca+ antiporter complement(3905540..3906736) Isosphaera pallida ATCC 43644 10156838 YP_004179820.1 CDS Isop_2703 NC_014962.1 3907399 3910872 D COGs: COG0421 Spermidine synthase; KEGG: plm:Plim_3243 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Spermine/spermidine synthase; hypothetical protein 3907399..3910872 Isosphaera pallida ATCC 43644 10156840 YP_004179821.1 CDS Isop_2704 NC_014962.1 3911261 3912244 R COGs: COG0823 Periplasmic component of the Tol biopolymer transport system; InterPro IPR011659; KEGG: rrs:RoseRS_1915 WD40 domain-containing protein; PFAM: WD40-like beta Propeller containing protein; SPTR: WD40-like Beta Propeller; PFAM: WD40-like Beta Propeller Repeat; WD40-like beta Propeller containing protein complement(3911261..3912244) Isosphaera pallida ATCC 43644 10156841 YP_004179822.1 CDS Isop_2705 NC_014962.1 3912231 3913628 R InterPro IPR017909: IPR010869; KEGG: sus:Acid_5708 hypothetical protein; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501); hypothetical protein complement(3912231..3913628) Isosphaera pallida ATCC 43644 10156842 YP_004179823.1 CDS Isop_2706 NC_014962.1 3913915 3915507 D COGs: COG0143 Methionyl-tRNA synthetase; InterPro IPR015413: IPR014758: IPR002304; KEGG: mta:Moth_0048 methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); SPTR: Methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; PFAM: tRNA synthetases class I (M); TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase 3913915..3915507 Isosphaera pallida ATCC 43644 10156843 YP_004179824.1 CDS Isop_2707 NC_014962.1 3915530 3916357 D COGs: COG2365 Protein tyrosine/serine phosphatase; InterPro IPR016130; KEGG: tye:THEYE_A0750 hypothetical protein; SPTR: Putative uncharacterized protein; protein tyrosine/serine phosphatase 3915530..3916357 Isosphaera pallida ATCC 43644 10156844 YP_004179825.1 CDS Isop_2708 NC_014962.1 3916560 3917114 D KEGG: pjd:Pjdr2_0967 two component transcriptional regulator, AraC family; SPTR: Two component transcriptional regulator, AraC family; hypothetical protein 3916560..3917114 Isosphaera pallida ATCC 43644 10156845 YP_004179826.1 CDS Isop_2709 NC_014962.1 3917469 3918581 R COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509: IPR008089; KEGG: geo:Geob_2923 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family; NAD-dependent epimerase/dehydratase complement(3917469..3918581) Isosphaera pallida ATCC 43644 10156846 YP_004179827.1 CDS Isop_2710 NC_014962.1 3918578 3921562 R KEGG: plm:Plim_0186 protein-L-isoaspartate O-methyltransferase; SPTR: Protein-L-isoaspartate O-methyltransferase; hypothetical protein complement(3918578..3921562) Isosphaera pallida ATCC 43644 10156847 YP_004179828.1 CDS Isop_2711 NC_014962.1 3921559 3922506 R COGs: COG2518 Protein-L-isoaspartate carboxylmethyltransferase; InterPro IPR000682; KEGG: rba:RB12080 protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; PRIAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; SPTR: Protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase complement(3921559..3922506) Isosphaera pallida ATCC 43644 10156848 YP_004179829.1 CDS Isop_2712 NC_014962.1 3922812 3925904 R COGs: COG0515 Serine/threonine protein kinase; InterProIPR019734: IPR000719: IPR013026: IPR008271: IPR 017442: IPR001440: IPR020635: IPR002290; KEGG: psl:Psta_0270 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; Tetratricopeptide TPR_1 repeat-containing protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; Tetratricopeptide repeat; SPTR: Probable serine/threonine protein kinase; PFAM: Protein kinase domain; Tetratricopeptide repeat; serine/threonine protein kinase complement(3922812..3925904) Isosphaera pallida ATCC 43644 10156849 YP_004179830.1 CDS Isop_2713 NC_014962.1 3926223 3927317 R COGs: COG4783 Putative Zn-dependent protease contains TPR repeats; InterPro IPR019734: IPR013026: IPR001440; KEGG: met:M446_6666 peptidase C14 caspase catalytic subunit P20; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Peptidase C14 caspase catalytic subunit p20; PFAM: Tetratricopeptide repeat; hypothetical protein complement(3926223..3927317) Isosphaera pallida ATCC 43644 10156850 YP_004179831.1 CDS Isop_2714 NC_014962.1 3927637 3928842 D COGs: COG1236 exonuclease of the beta-lactamase fold involved in RNA processing; KEGG: rrs:RoseRS_1582 RNA procession exonuclease-like protein; SPTR: Exonuclease of the beta-lactamase fold involved in RNA processing-like protein; PFAM: Metallo-beta-lactamase superfamily; RNA procession exonuclease-like protein 3927637..3928842 Isosphaera pallida ATCC 43644 10156851 YP_004179832.1 CDS Isop_2715 NC_014962.1 3928839 3930668 D COGs: COG1793 ATP-dependent DNA ligase; InterPro IPR012310: IPR016059: IPR012309; KEGG: rrs:RoseRS_1583 ATP dependent DNA ligase; PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; SPTR: ATP dependent DNA ligase; PFAM: ATP dependent DNA ligase domain; DNA ligase N terminus; ATP dependent DNA ligase C terminal region; ATP dependent DNA ligase 3928839..3930668 Isosphaera pallida ATCC 43644 10156852 YP_004179833.1 CDS Isop_2716 NC_014962.1 3930672 3930788 R hypothetical protein complement(3930672..3930788) Isosphaera pallida ATCC 43644 10156853 YP_004179834.1 CDS Isop_2717 NC_014962.1 3931012 3931383 R InterPro IPR013096; KEGG: tcu:Tcur_1342 cupin 2 conserved barrel domain protein; PFAM: Cupin 2 conserved barrel domain protein; SPTR: Cupin 2 conserved barrel domain protein; PFAM: Cupin domain; cupin complement(3931012..3931383) Isosphaera pallida ATCC 43644 10156854 YP_004179835.1 CDS Isop_2718 NC_014962.1 3931688 3932668 R COGs: COG0379 Quinolinate synthase; InterPro IPR003473; KEGG: plm:Plim_1159 quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A; PRIAM: Quinolinate synthase; SPTR: Quinolinate synthetase complex, A subunit; TIGRFAM: quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A protein; TIGRFAM: quinolinate synthetase complex, A subunit; quinolinate synthetase A complement(3931688..3932668) Isosphaera pallida ATCC 43644 10156855 YP_004179836.1 CDS Isop_2719 NC_014962.1 3933039 3934085 R COGs: COG4956 Integral membrane protein (PIN domain superfamily); InterPro IPR002792: IPR002716: IPR006596; KEGG: psl:Psta_0925 PilT protein domain protein; PFAM: PilT protein domain protein; SMART: Nucleotide binding protein PINc; SPTR: PilT protein domain protein; PFAM: PIN domain; PilT protein domain-containing protein complement(3933039..3934085) Isosphaera pallida ATCC 43644 10156856 YP_004179837.1 CDS Isop_2720 NC_014962.1 3934198 3934788 R COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310; KEGG: dau:Daud_1871 histidine triad (HIT) protein; PFAM: histidine triad (HIT) protein; SPTR: Histidine triad (HIT) protein; PFAM: HIT domain; histidine triad (HIT) protein complement(3934198..3934788) Isosphaera pallida ATCC 43644 10156857 YP_004179838.1 CDS Isop_2721 NC_014962.1 3934997 3935956 R KEGG: rha:RHA1_ro00403 major facilitator transporter; SPTR: Metabolite transporter, MFS superfamily protein; hypothetical protein complement(3934997..3935956) Isosphaera pallida ATCC 43644 10156858 YP_004179839.1 CDS Isop_2722 NC_014962.1 3936585 3938690 D COGs: COG0480 Translation elongation factors (GTPase); InterProIPR000795: IPR004161: IPR005517: IPR000640: IPR 004540: IPR005225; KEGG: plm:Plim_2166 translation elongation factor G; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain-containing protein; SPTR: Translation elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; manually curated; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; translation elongation factor 2 (EF-2/EF-G) 3936585..3938690 Isosphaera pallida ATCC 43644 10156859 YP_004179840.1 CDS Isop_2723 NC_014962.1 3939072 3941786 D KEGG: sti:Sthe_0323 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3939072..3941786 Isosphaera pallida ATCC 43644 10156860 YP_004179841.1 CDS Isop_2724 NC_014962.1 3941916 3942941 D COGs: COG0002 Acetylglutamate semialdehyde dehydrogenase; InterPro IPR000534: IPR012280: IPR000706; KEGG: plm:Plim_2484 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; PRIAM: N-acetyl-gamma-glutamyl-phosphate reductase; SPTR: N-acetyl-gamma-glutamyl-phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form; N-acetyl-gamma-glutamyl-phosphate reductase 3941916..3942941 Isosphaera pallida ATCC 43644 10156861 YP_004179842.1 CDS Isop_2725 NC_014962.1 3943028 3944386 D KEGG: ote:Oter_0116 putative acetyl xylan esterase; SPTR: Probable acetyl xylan esterase; putative acetyl xylan esterase 3943028..3944386 Isosphaera pallida ATCC 43644 10156862 YP_004179843.1 CDS Isop_2726 NC_014962.1 3944477 3946873 D COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: psl:Psta_2900 sulfatase; PFAM: sulfatase; SPTR: Sulfatase; PFAM: Sulfatase; sulfatase 3944477..3946873 Isosphaera pallida ATCC 43644 10156863 YP_004179844.1 CDS Isop_2727 NC_014962.1 3947091 3948503 D KEGG: pap:PSPA7_1173 OPT family oligopeptide transporter; SPTR: Oligopeptide transporter, OPT family; hypothetical protein 3947091..3948503 Isosphaera pallida ATCC 43644 10156864 YP_004179845.1 CDS Isop_2728 NC_014962.1 3949239 3951293 D COGs: COG2766 Putative Ser protein kinase; InterPro IPR013153: IPR010650; KEGG: psl:Psta_2229 putative serine protein kinase, PrkA; PFAM: PrkA AAA domain protein; PrkA serine kinase; SMART: PrkA AAA domain protein; SPTR: Putative serine protein kinase, PrkA; PFAM: PrkA AAA domain; PrkA serine protein kinase C-terminal domain; putative serine protein kinase PrkA 3949239..3951293 Isosphaera pallida ATCC 43644 10156865 YP_004179846.1 CDS Isop_2729 NC_014962.1 3951862 3952962 D COGs: COG2718 conserved hypothetical protein; InterPro IPR006698; KEGG: psl:Psta_2230 protein of unknown function DUF444; PFAM: protein of unknown function DUF444; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF444); hypothetical protein 3951862..3952962 Isosphaera pallida ATCC 43644 10156866 YP_004179847.1 CDS Isop_2730 NC_014962.1 3953075 3954634 D COGs: COG2719 conserved hypothetical protein; InterPro IPR018486: IPR007390; KEGG: afw:Anae109_2539 SpoVR family protein; PFAM: SpoVR family protein; SPTR: SpoVR family protein; PFAM: SpoVR like protein; SpoVR family protein 3953075..3954634 Isosphaera pallida ATCC 43644 10156867 YP_004179848.1 CDS Isop_2731 NC_014962.1 3954636 3955130 D KEGG: psl:Psta_2232 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein 3954636..3955130 Isosphaera pallida ATCC 43644 10156868 YP_004179849.1 CDS Isop_2732 NC_014962.1 3955284 3956525 R COGs: COG1668 ABC-type Na+ efflux pump permease component; KEGG: ilo:IL0275 ABC-type Na+ efflux pump, permease component; SPTR: ABC-type Na+ efflux pump, permease component; hypothetical protein complement(3955284..3956525) Isosphaera pallida ATCC 43644 10156869 YP_004179850.1 CDS Isop_2733 NC_014962.1 3956530 3957540 R COGs: COG4152 ABC-type uncharacterized transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: ilo:IL0274 ABC-type Na+ efflux pump, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter; ABC transporter-like protein complement(3956530..3957540) Isosphaera pallida ATCC 43644 10156870 YP_004179851.1 CDS Isop_2734 NC_014962.1 3957758 3958441 R COGs: COG0066 3-isopropylmalate dehydratase small subunit; InterPro IPR000573: IPR004431; KEGG: bpu:BPUM_2466 isopropylmalate isomerase small subunit; PFAM: aconitate hydratase domain-containing protein; SPTR: 3-isopropylmalate dehydratase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; 3-isopropylmalate dehydratase small subunit complement(3957758..3958441) Isosphaera pallida ATCC 43644 10156871 YP_004179852.1 CDS Isop_2735 NC_014962.1 3958446 3959861 R COGs: COG0065 3-isopropylmalate dehydratase large subunit; InterPro IPR001030: IPR004430: IPR018136; KEGG: sth:STH2116 isopropylmalate isomerase large subunit; PFAM: aconitate hydratase domain-containing protein; SPTR: 3-isopropylmalate dehydratase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit; 3-isopropylmalate dehydratase large subunit complement(3958446..3959861) Isosphaera pallida ATCC 43644 10156872 YP_004179853.1 CDS Isop_2736 NC_014962.1 3960073 3962481 R KEGG: mxa:MXAN_5625 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3960073..3962481) Isosphaera pallida ATCC 43644 10156873 YP_004179854.1 CDS Isop_2737 NC_014962.1 3962478 3964310 R KEGG: rrs:RoseRS_0824 glycosyltransferase; SPTR: 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family-like protein; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase; hypothetical protein complement(3962478..3964310) Isosphaera pallida ATCC 43644 10156874 YP_004179855.1 CDS Isop_2738 NC_014962.1 3964383 3964946 R COGs: COG1246 N-acetylglutamate synthase and related acetyltransferase; InterPro IPR000182; KEGG: dau:Daud_1142 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; N-acetyltransferase GCN5 complement(3964383..3964946) Isosphaera pallida ATCC 43644 10156875 YP_004179856.1 CDS Isop_2739 NC_014962.1 3965266 3966300 D COGs: COG3386 Gluconolactonase; InterPro IPR013017: IPR001258; KEGG: rba:RB10820 ring finger protein HAC1; PFAM: NHL repeat containing protein; SPTR: Ring finger protein; PFAM: NHL repeat; NHL repeat containing protein 3965266..3966300 Isosphaera pallida ATCC 43644 10156876 YP_004179857.1 CDS Isop_2740 NC_014962.1 3966364 3970083 D InterPro IPR002035: IPR010768; KEGG: psl:Psta_2128 von Willebrand factor type A; PFAM: protein of unknown function DUF1355; von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: von Willebrand factor type A; PFAM: von Willebrand factor type A domain; Protein of unknown function (DUF1355); hypothetical protein 3966364..3970083 Isosphaera pallida ATCC 43644 10156877 YP_004179858.1 CDS Isop_2742 NC_014962.1 3970765 3971151 D KEGG: sds:SDEG_0121 cytochrome d ubiquinol oxidase, subunit II; SPTR: Cytochrome d ubiquinol oxidase, subunit II; hypothetical protein 3970765..3971151 Isosphaera pallida ATCC 43644 10156879 YP_004179859.1 CDS Isop_2743 NC_014962.1 3971161 3972141 D COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: psl:Psta_2130 protein of unknown function DUF58; PFAM: protein of unknown function DUF58; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF58; hypothetical protein 3971161..3972141 Isosphaera pallida ATCC 43644 10156880 YP_004179860.1 CDS Isop_2744 NC_014962.1 3972138 3972326 D KEGG: nda:Ndas_3747 putative integral membrane protein; SPTR: Putative integral membrane protein; hypothetical protein 3972138..3972326 Isosphaera pallida ATCC 43644 10156881 YP_004179861.1 CDS Isop_2745 NC_014962.1 3972394 3974514 D InterPro IPR002035; KEGG: psl:Psta_2131 von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: von Willebrand factor type A; PFAM: Aerotolerance regulator N-terminal; von Willebrand factor type A 3972394..3974514 Isosphaera pallida ATCC 43644 10156882 YP_004179862.1 CDS Isop_2746 NC_014962.1 3974718 3976283 R COGs: COG0260 Leucyl aminopeptidase; InterPro IPR000819: IPR008283; KEGG: psl:Psta_1049 leucyl aminopeptidase; PFAM: peptidase M17 leucyl aminopeptidase domain protein; SPTR: Cytosol aminopeptidase; PFAM: Cytosol aminopeptidase family, catalytic domain; Cytosol aminopeptidase family, N-terminal domain; peptidase M17 leucyl aminopeptidase domain-containing protein complement(3974718..3976283) Isosphaera pallida ATCC 43644 10156883 YP_004179863.1 CDS Isop_2747 NC_014962.1 3976584 3977879 D KEGG: psl:Psta_2350 esterase; SPTR: Putative uncharacterized protein; esterase 3976584..3977879 Isosphaera pallida ATCC 43644 10156884 YP_004179864.1 CDS Isop_2748 NC_014962.1 3978116 3979312 D COGs: COG0183 Acetyl-CoA acetyltransferase; InterProIPR020615: IPR020610: IPR001412: IPR020613: IPR 020616: IPR020617: IPR002155; KEGG: gau:GAU_1289 acetyl-CoA acetyltransferase; PFAM: Thiolase-like; PRIAM: Acetyl-CoA C-acetyltransferase; SPTR: Acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; acetyl-CoA acetyltransferase 3978116..3979312 Isosphaera pallida ATCC 43644 10156885 YP_004179865.1 CDS Isop_2750 NC_014962.1 3979629 3981284 R COGs: COG3876 conserved hypothetical protein; InterPro IPR008302; KEGG: ank:AnaeK_1452 hypothetical protein; PFAM: Uncharacterised conserved protein UCP016719; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1343); hypothetical protein complement(3979629..3981284) Isosphaera pallida ATCC 43644 10156887 YP_004179866.1 CDS Isop_2751 NC_014962.1 3981319 3982359 R COGs: COG2971 N-acetylglucosamine kinase; InterPro IPR002731; KEGG: rba:RB7515 putative N-acetylglucosamine kinase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; SPTR: Putative uncharacterized protein; PFAM: BadF/BadG/BcrA/BcrD ATPase family; BadF/BadG/BcrA/BcrD type ATPase complement(3981319..3982359) Isosphaera pallida ATCC 43644 10156888 YP_004179867.1 CDS Isop_2752 NC_014962.1 3982356 3983297 R COGs: COG2103 sugar phosphate isomerase; InterPro IPR005488: IPR005486: IPR001347; KEGG: pak:HMPREF0675_4202 N-acetylmuramic acid 6-phosphate etherase; PFAM: sugar isomerase (SIS); SPTR: Glucokinase regulatory-like protein; TIGRFAM: glucokinase regulatory-like protein; PFAM: SIS domain; TIGRFAM: N-acetylmuramic acid 6-phosphate etherase; RpiR family transcriptional regulator complement(3982356..3983297) Isosphaera pallida ATCC 43644 10156889 YP_004179868.1 CDS Isop_2753 NC_014962.1 3984087 3986054 D COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterPro IPR002942: IPR018496: IPR006145: IPR000748; KEGG: plm:Plim_4141 pseudouridine synthase; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: Pseudouridine synthase; PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; pseudouridine synthase 3984087..3986054 Isosphaera pallida ATCC 43644 10156890 YP_004179869.1 CDS Isop_2754 NC_014962.1 3986182 3987078 D COGs: COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase; InterProIPR017927: IPR008333: IPR001433: IPR019480: IPR 012165; KEGG: psl:Psta_4647 oxidoreductase FAD/NAD(P)-binding domain protein; PFAM: Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; SPTR: Dihydroorotate dehydrogenase electron transfer subunit; PFAM: Oxidoreductase FAD-binding domain; Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain; dihydroorotate dehydrogenase electron transfer subunit 3986182..3987078 Isosphaera pallida ATCC 43644 10156891 YP_004179870.1 CDS Isop_2755 NC_014962.1 3987316 3990735 D InterPro IPR010916: IPR006650: IPR001434; KEGG: psl:Psta_0523 conserved repeat domain protein; SPTR: 60 kDa outer membrane protein; TIGRFAM: conserved repeat domain protein; PFAM: Domain of unknown function DUF11; TIGRFAM: conserved repeat domain; hypothetical protein 3987316..3990735 Isosphaera pallida ATCC 43644 10156892 YP_004179871.1 CDS Isop_2756 NC_014962.1 3990732 3991784 D KEGG: plm:Plim_2088 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3990732..3991784 Isosphaera pallida ATCC 43644 10156893 YP_004179872.1 CDS Isop_2757 NC_014962.1 3992099 3992644 R COGs: COG4276 conserved hypothetical protein; InterPro IPR005031; KEGG: scl:sce1328 hypothetical protein; PFAM: cyclase/dehydrase; SPTR: Putative uncharacterized protein; PFAM: Polyketide cyclase / dehydrase and lipid transport; cyclase/dehydrase complement(3992099..3992644) Isosphaera pallida ATCC 43644 10156894 YP_004179873.1 CDS Isop_2758 NC_014962.1 3993063 3994559 D COGs: COG0673 dehydrogenase and related protein; InterPro IPR017909: IPR013838: IPR000683: IPR006311; KEGG: rba:RB3070 putative oxidoreductase; PFAM: oxidoreductase domain protein; SPTR: Putative uncharacterized protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; oxidoreductase domain-containing protein 3993063..3994559 Isosphaera pallida ATCC 43644 10156895 YP_004179874.1 CDS Isop_2759 NC_014962.1 3995207 3996412 R COGs: COG1820 N-acetylglucosamine-6-phosphate deacetylase; KEGG: psl:Psta_2871 N-acetylglucosamine-6-phosphate deacetylase; PRIAM: N-acetylglucosamine-6-phosphate deacetylase; SPTR: N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; N-acetylglucosamine-6-phosphate deacetylase complement(3995207..3996412) Isosphaera pallida ATCC 43644 10156896 YP_004179875.1 CDS Isop_2760 NC_014962.1 3996563 3997285 D COGs: COG0704 Phosphate uptake regulator; InterPro IPR008170; KEGG: dat:HRM2_02440 PhoU2; PFAM: PhoU family protein; SPTR: Putative uncharacterized protein; TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU; phosphate uptake regulator PhoU 3996563..3997285 Isosphaera pallida ATCC 43644 10156897 YP_004179876.1 CDS Isop_2761 NC_014962.1 3997494 4003841 D COGs: COG2373 Large extracellular alpha-helical protein; InterPro IPR002890: IPR011625: IPR019565; KEGG: psl:Psta_3267 alpha-2-macroglobulin domain protein; PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; Alpha-2-macroglobulin, thiol-ester bond-forming; SPTR: Putative uncharacterized protein; PFAM: Alpha-macro-globulin thiol-ester bond-forming region; Alpha-2-macroglobulin family; MG2 domain; Alpha-2-macroglobulin family N-terminal region; alpha-2-macroglobulin domain-containing protein 3997494..4003841 Isosphaera pallida ATCC 43644 10156898 YP_004179877.1 CDS Isop_2762 NC_014962.1 4003907 4004113 D KEGG: gym:GYMC10_4089 ABC transporter related protein; SPTR: Putative uncharacterized protein M88B7.1f; hypothetical protein 4003907..4004113 Isosphaera pallida ATCC 43644 10156899 YP_004179878.1 CDS Isop_2763 NC_014962.1 4004128 4006263 D KEGG: sus:Acid_1421 glycosyl transferase family protein; SPTR: Tetratricopeptide repeat protein; hypothetical protein 4004128..4006263 Isosphaera pallida ATCC 43644 10156900 YP_004179879.1 CDS Isop_2764 NC_014962.1 4006411 4006884 D COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR006175; KEGG: rba:RB1270 putative translation initiation inhibitor; PFAM: Endoribonuclease L-PSP; SPTR: Endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; endoribonuclease L-PSP 4006411..4006884 Isosphaera pallida ATCC 43644 10156901 YP_004179880.1 CDS Isop_2765 NC_014962.1 4006881 4007774 D COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002347: IPR020904: IPR002198; KEGG: sli:Slin_5818 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 4006881..4007774 Isosphaera pallida ATCC 43644 10156902 YP_004179881.1 CDS Isop_2766 NC_014962.1 4007779 4008591 D COGs: COG4821 Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain; InterPro IPR006650; KEGG: rca:Rcas_2756 hypothetical protein; SPTR: Uncharacterized protein containing SIS (Sugar isomerase) phosphosugar binding domain-like protein; hypothetical protein 4007779..4008591 Isosphaera pallida ATCC 43644 10156903 YP_004179882.1 CDS Isop_2767 NC_014962.1 4008664 4009401 D COGs: COG0854 Pyridoxal phosphate biosynthesis protein; InterPro IPR004569; KEGG: dia:Dtpsy_2616 pyridoxine 5'-phosphate synthase; PFAM: Pyridoxal phosphate biosynthetic protein PdxJ; PRIAM: Pyridoxine 5'-phosphate synthase; SPTR: Pyridoxine 5'-phosphate synthase; TIGRFAM: pyridoxal phosphate biosynthetic protein PdxJ; PFAM: Pyridoxal phosphate biosynthesis protein PdxJ; TIGRFAM: pyridoxine 5'-phosphate synthase; pyridoxine 5'-phosphate synthase 4008664..4009401 Isosphaera pallida ATCC 43644 10156904 YP_004179883.1 CDS Isop_2768 NC_014962.1 4009594 4009914 D InterPro IPR013097; KEGG: psl:Psta_3643 stress responsive alpha-beta barrel domain protein; PFAM: Stress responsive alpha-beta barrel domain-containing protein; SPTR: Putative uncharacterized protein; PFAM: Stress responsive A/B Barrel Domain; stress responsive alpha-beta barrel domain-containing protein 4009594..4009914 Isosphaera pallida ATCC 43644 10156905 YP_004179884.1 CDS Isop_2769 NC_014962.1 4010054 4013650 R InterPro IPR009056: IPR003088: IPR013428: IPR013427; KEGG: dfe:Dfer_5354 membrane-bound dehydrogenase domain protein; PFAM: cytochrome c class I; SPTR: Putative uncharacterized protein; TIGRFAM: membrane-bound dehydrogenase domain protein; heme-binding protein; PFAM: Cytochrome c; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type; membrane-bound dehydrogenase domain-containing protein complement(4010054..4013650) Isosphaera pallida ATCC 43644 10156906 YP_004179885.1 CDS Isop_2770 NC_014962.1 4013932 4014876 R InterPro IPR018512: IPR018511: IPR001343; KEGG: cpb:Cphamn1_0514 RTX toxins and related Ca2+-binding protein; PFAM: Hemolysin-type calcium-binding region; SPTR: Hemolysin-type calcium-binding protein; PFAM: Hemolysin-type calcium-binding repeat (2 copies); hemolysin-type calcium-binding protein complement(4013932..4014876) Isosphaera pallida ATCC 43644 10156907 YP_004179886.1 CDS Isop_2771 NC_014962.1 4015183 4018242 D COGs: COG0277 FAD/FMN-containing dehydrogenase; InterProIPR017896: IPR016166: IPR017900: IPR006094: IPR 004113: IPR004017; KEGG: rrs:RoseRS_3858 FAD linked oxidase domain-containing protein; PFAM: FAD linked oxidase domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; SPTR: FAD linked oxidase domain protein; PFAM: Cysteine-rich domain; FAD binding domain; FAD linked oxidases, C-terminal domain; FAD linked oxidase domain-containing protein 4015183..4018242 Isosphaera pallida ATCC 43644 10156908 YP_004179887.1 CDS Isop_2772 NC_014962.1 4018239 4019456 R InterPro IPR019782; KEGG: gob:Gobs_1160 WD40 repeat, subgroup; SPTR: WD40 repeat, subgroup; hypothetical protein complement(4018239..4019456) Isosphaera pallida ATCC 43644 10156909 YP_004179888.1 CDS Isop_2773 NC_014962.1 4019789 4020910 R InterPro IPR001120: IPR012902; KEGG: plm:Plim_0697 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein complement(4019789..4020910) Isosphaera pallida ATCC 43644 10156910 YP_004179889.1 CDS Isop_2774 NC_014962.1 4021152 4021376 R KEGG: vvi:100248137 similar to cysteine protease Cp5; SPTR: Whole genome shotgun sequence of line PN40024, scaffold_3.assembly12x; hypothetical protein complement(4021152..4021376) Isosphaera pallida ATCC 43644 10156911 YP_004179890.1 CDS Isop_2775 NC_014962.1 4021823 4022053 D KEGG: kla:KLLA0C03740g hypothetical protein; SPTR: tRNA (guanine-N(1)-)-methyltransferase; hypothetical protein 4021823..4022053 Isosphaera pallida ATCC 43644 10156912 YP_004179891.1 CDS Isop_2776 NC_014962.1 4022338 4023465 D InterPro IPR001120: IPR012902; KEGG: plm:Plim_0377 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 4022338..4023465 Isosphaera pallida ATCC 43644 10156913 YP_004179892.1 CDS Isop_2777 NC_014962.1 4023607 4026630 R InterPro IPR013517: IPR011519; KEGG: aba:Acid345_0425 hypothetical protein; PFAM: ASPIC/UnbV domain protein; FG-GAP repeat protein; SPTR: Putative uncharacterized protein; PFAM: ASPIC and UnbV; FG-GAP repeat; ASPIC/UnbV domain-containing protein complement(4023607..4026630) Isosphaera pallida ATCC 43644 10156914 YP_004179893.1 CDS Isop_2778 NC_014962.1 4026824 4028239 R COGs: COG1519 3-deoxy-D-manno-octulosonic-acid transferase; InterPro IPR007507; KEGG: psl:Psta_4166 three-deoxy-D-manno-octulosonic-acid transferase domain protein; PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; SPTR: Three-deoxy-D-manno-octulosonic-acid transferase domain protein; PFAM: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein complement(4026824..4028239) Isosphaera pallida ATCC 43644 10156915 YP_004179894.1 CDS Isop_2779 NC_014962.1 4028578 4032291 R COGs: COG0653 Preprotein translocase subunit SecA (ATPase RNA helicase); InterProIPR014018: IPR011115: IPR000185: IPR020937: IPR 011130: IPR011116: IPR004027; KEGG: plm:Plim_2368 preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; SecA Wing and Scaffold; SEC-C motif domain protein; SPTR: Preprotein translocase, SecA subunit; TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SEC-C motif; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit; protein translocase subunit secA complement(4028578..4032291) Isosphaera pallida ATCC 43644 10156916 YP_004179895.1 CDS Isop_2780 NC_014962.1 4032800 4037293 R COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR020635: IPR002290: IPR019734: IPR 017441: IPR008271: IPR017442: IPR001440; KEGG: rop:ROP_51280 putative serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; Tetratricopeptide TPR_1 repeat-containing protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; Tetratricopeptide repeat; SPTR: Putative serine/threonine protein kinase; PFAM: Protein kinase domain; serine/threonine protein kinase complement(4032800..4037293) Isosphaera pallida ATCC 43644 10156917 YP_004179896.1 CDS Isop_2781 NC_014962.1 4037901 4038761 R COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR000792: IPR013249: IPR014284; KEGG: rba:RB138 hypothetical protein; PFAM: Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; SPTR: Putative uncharacterized protein; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: ECF sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; ECF subfamily RNA polymerase sigma-24 factor complement(4037901..4038761) Isosphaera pallida ATCC 43644 10156918 YP_004179897.1 CDS Isop_2782 NC_014962.1 4039191 4041212 D COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR003148: IPR006037; KEGG: rca:Rcas_0931 TrkA domain-containing protein; PFAM: TrkA-N domain protein; TrkA-C domain protein; SPTR: TrkA-N domain protein; PFAM: TrkA-N domain; TrkA-C domain; TrkA-N domain-containing protein 4039191..4041212 Isosphaera pallida ATCC 43644 10156919 YP_004179898.1 CDS Isop_2783 NC_014962.1 4047261 4049321 D COGs: COG0556 Helicase subunit of the DNA excision repair complex; InterProIPR001943: IPR014021: IPR001650: IPR014001: IPR 004807: IPR006935; KEGG: plm:Plim_0981 excinuclease ABC, B subunit; PFAM: helicase domain protein; type III restriction protein res subunit; UvrB/UvrC protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: UvrABC system protein B; TIGRFAM: excinuclease ABC, B subunit; manually curated; PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit; Excinuclease ABC subunit B 4047261..4049321 Isosphaera pallida ATCC 43644 10156923 YP_004179899.1 CDS Isop_2784 NC_014962.1 4049318 4050262 D COGs: COG0157 Nicotinate-nucleotide pyrophosphorylase; InterPro IPR002638: IPR004393; KEGG: cag:Cagg_1774 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase; PRIAM: Nicotinate-nucleotide diphosphorylase (carboxylating); SPTR: Quinolinate phosphoribosyl transferase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; nicotinate-nucleotide pyrophosphorylase 4049318..4050262 Isosphaera pallida ATCC 43644 10156924 YP_004179900.1 CDS Isop_2785 NC_014962.1 4050303 4051271 D COGs: COG0340 Biotin-(acetyl-CoA carboxylase) ligase; InterPro IPR004143: IPR004408; KEGG: mxa:MXAN_4152 BirA bifunctional protein; PFAM: biotin/lipoate A/B protein ligase; SPTR: BirA bifunctional protein; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region; biotin--acetyl-CoA-carboxylase ligase 4050303..4051271 Isosphaera pallida ATCC 43644 10156925 YP_004179901.1 CDS Isop_2786 NC_014962.1 4051284 4052228 D InterPro IPR000537; KEGG: cyt:cce_4454 hypothetical protein; PFAM: UbiA prenyltransferase; SPTR: Putative uncharacterized protein; PFAM: UbiA prenyltransferase family; UbiA prenyltransferase 4051284..4052228 Isosphaera pallida ATCC 43644 10156926 YP_004179902.1 CDS Isop_2787 NC_014962.1 4052643 4052789 D hypothetical protein 4052643..4052789 Isosphaera pallida ATCC 43644 10156927 YP_004179903.1 CDS Isop_2788 NC_014962.1 4052990 4053652 D InterPro IPR019734: IPR013026: IPR001440; KEGG: psl:Psta_3320 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: TPR repeat-containing protein; PFAM: Tetratricopeptide repeat; hypothetical protein 4052990..4053652 Isosphaera pallida ATCC 43644 10156928 YP_004179904.1 CDS Isop_2789 NC_014962.1 4053735 4056449 D COGs: COG1643 HrpA-like helicase; InterProIPR014021: IPR001650: IPR014001: IPR007502: IPR 013689: IPR010225; KEGG: psl:Psta_3120 ATP-dependent helicase HrpB; PFAM: Helicase ATP-dependent domain protein; helicase domain protein; helicase-associated domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: ATP-dependent helicase HrpB; TIGRFAM: ATP-dependent helicase HrpB; PFAM: Helicase conserved C-terminal domain; Helicase associated domain (HA2); ATP-dependent helicase C-terminal; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent helicase HrpB; ATP-dependent helicase HrpB 4053735..4056449 Isosphaera pallida ATCC 43644 10156929 YP_004179905.1 CDS Isop_2790 NC_014962.1 4056474 4057310 R KEGG: dvi:Dvir_GJ16689 GJ16689 gene product from transcript GJ16689-RA; SPTR: GJ16689; hypothetical protein complement(4056474..4057310) Isosphaera pallida ATCC 43644 10156930 YP_004179906.1 CDS Isop_2791 NC_014962.1 4057680 4059170 D KEGG: maq:Maqu_0305 acriflavin resistance protein; SPTR: Putative uncharacterized protein; hypothetical protein 4057680..4059170 Isosphaera pallida ATCC 43644 10156931 YP_004179907.1 CDS Isop_2792 NC_014962.1 4059394 4061352 R InterPro IPR019825: IPR011723; KEGG: lma:LmjF34.0690 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: MJ0042 family finger-like protein; TIGRFAM: MJ0042 family finger-like domain; hypothetical protein complement(4059394..4061352) Isosphaera pallida ATCC 43644 10156932 YP_004179908.1 CDS Isop_2793 NC_014962.1 4061782 4062660 D KEGG: nvi:100115235 similar to gag-pol polyprotein; SPTR: TonB family protein; hypothetical protein 4061782..4062660 Isosphaera pallida ATCC 43644 10156933 YP_004179909.1 CDS Isop_2794 NC_014962.1 4062853 4064271 R COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterProIPR013027: IPR000815: IPR012999: IPR004099: IPR 006258; KEGG: phe:Phep_3001 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: Dihydrolipoyl dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase complement(4062853..4064271) Isosphaera pallida ATCC 43644 10156934 YP_004179910.1 CDS Isop_2795 NC_014962.1 4064580 4066550 R InterPro IPR003961: IPR006558: IPR004843; KEGG: plm:Plim_2974 metallophosphoesterase; PFAM: metallophosphoesterase; SMART: LamG domain protein jellyroll fold domain protein; SPTR: Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase; metallophosphoesterase complement(4064580..4066550) Isosphaera pallida ATCC 43644 10156935 YP_004179911.1 CDS Isop_2796 NC_014962.1 4066765 4067628 R COGs: COG0159 Tryptophan synthase alpha chain; InterPro IPR002028: IPR018204; KEGG: psl:Psta_3809 tryptophan synthase, alpha subunit; PFAM: tryptophan synthase alpha chain; PRIAM: Tryptophan synthase; SPTR: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit; PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit; tryptophan synthase subunit alpha complement(4066765..4067628) Isosphaera pallida ATCC 43644 10156936 YP_004179912.1 CDS Isop_2797 NC_014962.1 4067718 4067996 R KEGG: hsa:57597 BAH domain and coiled-coil containing 1; SPTR: BAH and coiled-coil domain-containing protein 1; hypothetical protein complement(4067718..4067996) Isosphaera pallida ATCC 43644 10156937 YP_004179913.1 CDS Isop_2798 NC_014962.1 4068368 4069651 R COGs: COG0133 Tryptophan synthase beta chain; InterPro IPR006653: IPR001926: IPR006654; KEGG: plm:Plim_3191 tryptophan synthase, beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Tryptophan synthase, beta subunit; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit; tryptophan synthase subunit beta complement(4068368..4069651) Isosphaera pallida ATCC 43644 10156938 YP_004179914.1 CDS Isop_2799 NC_014962.1 4070271 4071227 D COGs: COG1355 dioxygenase; InterPro IPR002737; KEGG: rca:Rcas_3629 hypothetical protein; PFAM: protein of unknown function DUF52; SPTR: Putative uncharacterized protein; PFAM: Memo-like protein; hypothetical protein 4070271..4071227 Isosphaera pallida ATCC 43644 10156939 YP_004179915.1 CDS Isop_2800 NC_014962.1 4071327 4072265 D COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: rmr:Rmar_2446 alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 4071327..4072265 Isosphaera pallida ATCC 43644 10156940 YP_004179916.1 CDS Isop_2801 NC_014962.1 4072275 4073927 R COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR013027; KEGG: hau:Haur_1711 FAD dependent oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(4072275..4073927) Isosphaera pallida ATCC 43644 10156941 YP_004179917.1 CDS Isop_2802 NC_014962.1 4074255 4075037 D COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: psl:Psta_3932 beta-lactamase domain protein; SPTR: Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily; beta-lactamase domain-containing protein 4074255..4075037 Isosphaera pallida ATCC 43644 10156942 YP_004179918.1 CDS Isop_2803 NC_014962.1 4075316 4078342 D COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR020635: IPR002290: IPR017441: IPR 008271: IPR017442; KEGG: rba:RB9854 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Probable serine/threonine protein kinase; PFAM: Protein kinase domain; serine/threonine protein kinase 4075316..4078342 Isosphaera pallida ATCC 43644 10156943 YP_004179919.1 CDS Isop_2804 NC_014962.1 4078354 4079220 R COGs: COG1099 metal-dependent hydrolase with the TIM-barrel fold; InterPro IPR001130: IPR012022; KEGG: psl:Psta_3790 TatD-related deoxyribonuclease; PFAM: TatD-related deoxyribonuclease; SPTR: TatD-related deoxyribonuclease; PFAM: TatD related DNase; TatD-like deoxyribonuclease complement(4078354..4079220) Isosphaera pallida ATCC 43644 10156944 YP_004179920.1 CDS Isop_2805 NC_014962.1 4079602 4079928 R KEGG: rba:RB1043 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4079602..4079928) Isosphaera pallida ATCC 43644 10156945 YP_004179921.1 CDS Isop_2806 NC_014962.1 4080416 4083022 D KEGG: sus:Acid_4316 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4080416..4083022 Isosphaera pallida ATCC 43644 10156946 YP_004179922.1 CDS Isop_2807 NC_014962.1 4083385 4087548 D COGs: COG5276 conserved hypothetical protein; InterPro IPR011031: IPR013211; KEGG: sus:Acid_4317 LVIVD repeat-containing protein; PFAM: LVIVD repeat-containing protein; SPTR: LVIVD repeat protein; PFAM: LVIVD repeat; LVIVD repeat-containing protein 4083385..4087548 Isosphaera pallida ATCC 43644 10156947 YP_004179923.1 CDS Isop_2808 NC_014962.1 4088038 4089030 D COGs: COG4188 dienelactone hydrolase; KEGG: gvi:glr1689 hypothetical protein; SPTR: Glr1689 protein; PFAM: Chlorophyllase; hypothetical protein 4088038..4089030 Isosphaera pallida ATCC 43644 10156948 YP_004179924.1 CDS Isop_2809 NC_014962.1 4089226 4089954 D COGs: COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: scl:sce9324 putative molybdopterin-guanine dinucleotide biosynthesis protein A; SPTR: Putative molybdopterin-guanine dinucleotide biosynthesis protein A; manually curated; putative molybdopterin-guanine dinucleotide biosynthesis protein A 4089226..4089954 Isosphaera pallida ATCC 43644 10156949 YP_004179925.1 CDS Isop_2810 NC_014962.1 4089846 4090487 R COGs: COG0597 Lipoprotein signal peptidase; InterPro IPR001872; KEGG: rba:RB10374 prolipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; SPTR: Probable prolipoprotein signal peptidase; TIGRFAM: lipoprotein signal peptidase; PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase; lipoprotein signal peptidase complement(4089846..4090487) Isosphaera pallida ATCC 43644 10156950 YP_004179926.1 CDS Isop_2811 NC_014962.1 4090896 4092293 D COGs: COG2079 Uncharacterized protein involved in propionate catabolism; InterPro IPR005656; KEGG: nde:NIDE3125 2-methylcitrate dehydratase; PFAM: MmgE/PrpD family protein; PRIAM: 2-methylcitrate dehydratase; SPTR: 2-methylcitrate dehydratase; PFAM: MmgE/PrpD family; 2-methylcitrate dehydratase 4090896..4092293 Isosphaera pallida ATCC 43644 10156951 YP_004179927.1 CDS Isop_2812 NC_014962.1 4092420 4093760 D COGs: COG0673 dehydrogenase and related protein; InterPro IPR017909: IPR000683: IPR006311; KEGG: psl:Psta_2822 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; SPTR: Oxidoreductase family, NAD-binding Rossmann fold protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase domain-containing protein 4092420..4093760 Isosphaera pallida ATCC 43644 10156952 YP_004179928.1 CDS Isop_2813 NC_014962.1 4094508 4095431 R COGs: COG3823 Glutamine cyclotransferase; InterPro IPR007788; KEGG: plm:Plim_1300 glutamine cyclotransferase; PFAM: glutamine cyclotransferase; SPTR: Putative glutamine cyclotransferase; PFAM: Glutamine cyclotransferase; glutamine cyclotransferase complement(4094508..4095431) Isosphaera pallida ATCC 43644 10156954 YP_004179929.1 CDS Isop_2814 NC_014962.1 4096005 4097381 D COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR002078: IPR001789: IPR003593: IPR002197; KEGG: mxa:MXAN_0172 sigma-54 dependent DNA-binding response regulator; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: Sigma-54 dependent DNA-binding response regulator; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; Fis family two component sigma54 specific transcriptional regulator 4096005..4097381 Isosphaera pallida ATCC 43644 10156955 YP_004179930.1 CDS Isop_2815 NC_014962.1 4097378 4099252 D COGs: COG5002 Signal transduction histidine kinase; InterProIPR005467: IPR003660: IPR004358: IPR003661: IPR 003594: IPR000014; KEGG: ote:Oter_1644 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SPTR: Integral membrane sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; multi-sensor signal transduction histidine kinase 4097378..4099252 Isosphaera pallida ATCC 43644 10156956 YP_004179931.1 CDS Isop_2816 NC_014962.1 4099337 4102045 D COGs: COG0474 Cation transport ATPase; InterProIPR006415: IPR018303: IPR004014: IPR008250: IPR 005834: IPR006068: IPR001757; KEGG: bwe:BcerKBAB4_3981 magnesium-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; SPTR: Magnesium-transporting ATPase, P-type 1; TIGRFAM: magnesium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; Cation transporter/ATPase, N-terminus; haloacid dehalogenase-like hydrolase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; magnesium-translocating P-type ATPase; magnesium-translocating P-type ATPase 4099337..4102045 Isosphaera pallida ATCC 43644 10156957 YP_004179932.1 CDS Isop_2817 NC_014962.1 4102063 4102752 D COGs: COG1285 membrane protein; InterPro IPR003416; KEGG: bca:BCE_4213 MgtC family protein; PFAM: MgtC/SapB transporter; SPTR: Mg(2+) transport ATPase protein C; PFAM: MgtC family; MgtC/SapB transporter 4102063..4102752 Isosphaera pallida ATCC 43644 10156958 YP_004179933.1 CDS Isop_2818 NC_014962.1 4103017 4105698 D COGs: COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; InterPro IPR000121: IPR002192: IPR008279: IPR010121; KEGG: ddf:DEFDS_0235 pyruvate phosphate dikinase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; PEP-utilizing protein; PRIAM: Pyruvate, phosphate dikinase; SPTR: Pyruvate phosphate dikinase; TIGRFAM: pyruvate, phosphate dikinase; PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: pyruvate, phosphate dikinase; pyruvate phosphate dikinase 4103017..4105698 Isosphaera pallida ATCC 43644 10156959 YP_004179934.1 CDS Isop_2819 NC_014962.1 4106355 4108070 D COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR003593: IPR007831: IPR001482; KEGG: rba:RB12768 type IV fimbrial assembly protein PilB; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; SPTR: Type IV fimbrial assembly protein PilB; PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain; TIGRFAM: general secretory pathway protein E; type II secretion system protein E (GspE) 4106355..4108070 Isosphaera pallida ATCC 43644 10156960 YP_004179935.1 CDS Isop_2820 NC_014962.1 4108778 4109908 D COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT; InterPro IPR003593: IPR001482: IPR006321; KEGG: plm:Plim_0409 twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase; SPTR: Twitching mobility protein PilT; TIGRFAM: twitching motility protein; PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT; twitching motility protein 4108778..4109908 Isosphaera pallida ATCC 43644 10156961 YP_004179936.1 CDS Isop_2821 NC_014962.1 4110141 4111859 D COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR001482: IPR007831; KEGG: plm:Plim_0408 type II secretion system protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SPTR: Type II secretion system protein E; PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain; TIGRFAM: general secretory pathway protein E; type II secretion system protein E 4110141..4111859 Isosphaera pallida ATCC 43644 10156962 YP_004179937.1 CDS Isop_2822 NC_014962.1 4112248 4113495 D COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR003004: IPR018076; KEGG: plm:Plim_0407 type II secretion system protein; PFAM: Type II secretion system F domain; SPTR: Type IV fimbrial assembly protein PilC; PFAM: Bacterial type II secretion system protein F domain; type II secretion system F domain-containing protein 4112248..4113495 Isosphaera pallida ATCC 43644 10156963 YP_004179938.1 CDS Isop_2823 NC_014962.1 4113652 4114749 D InterPro IPR000983: IPR001120: IPR012902; KEGG: plm:Plim_0406 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 4113652..4114749 Isosphaera pallida ATCC 43644 10156964 YP_004179939.1 CDS Isop_2824 NC_014962.1 4115033 4116928 D InterPro IPR001120: IPR012902; KEGG: plm:Plim_0405 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 4115033..4116928 Isosphaera pallida ATCC 43644 10156965 YP_004179940.1 CDS Isop_2825 NC_014962.1 4116928 4118556 D COGs: COG4970 Tfp pilus assembly protein FimT; InterPro IPR001120: IPR012902; KEGG: xac:XAC2669 pre-pilin like leader sequence; SPTR: Pre-pilin like leader sequence; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 4116928..4118556 Isosphaera pallida ATCC 43644 10156966 YP_004179941.1 CDS Isop_2826 NC_014962.1 4118553 4120064 D InterPro IPR012902; KEGG: plm:Plim_0403 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4118553..4120064 Isosphaera pallida ATCC 43644 10156967 YP_004179942.1 CDS Isop_2827 NC_014962.1 4120165 4122195 D InterPro IPR017871: IPR001120: IPR012902; KEGG: plm:Plim_0402 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 4120165..4122195 Isosphaera pallida ATCC 43644 10156968 YP_004179943.1 CDS Isop_2828 NC_014962.1 4122339 4128881 D KEGG: psl:Psta_0540 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4122339..4128881 Isosphaera pallida ATCC 43644 10156969 YP_004179944.1 CDS Isop_2829 NC_014962.1 4129066 4130313 D InterPro IPR001120: IPR012902; KEGG: rba:RB2782 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 4129066..4130313 Isosphaera pallida ATCC 43644 10156970 YP_004179945.1 CDS Isop_2830 NC_014962.1 4130139 4130750 R KEGG: mar:MAE_26830 hypothetical protein; SPTR: Similarity with the tr|Q9PFN1|Q9PFN1; hypothetical protein complement(4130139..4130750) Isosphaera pallida ATCC 43644 10156971 YP_004179946.1 CDS Isop_2831 NC_014962.1 4131044 4132927 D InterPro IPR017936: IPR000866; KEGG: rba:RB9164 putative thiol-disulfide isomerase or thioredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Putative uncharacterized protein; PFAM: Copper type II ascorbate-dependent monooxygenase, C-terminal domain; Redoxin; alkyl hydroperoxide reductase 4131044..4132927 Isosphaera pallida ATCC 43644 10156972 YP_004179947.1 CDS Isop_2832 NC_014962.1 4133330 4137256 D InterPro IPR000209: IPR018247; KEGG: ton:TON_1355 subtilisin-like serine protease precursor; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: Putative uncharacterized protein; peptidase S8 and S53 subtilisin kexin sedolisin 4133330..4137256 Isosphaera pallida ATCC 43644 10156973 YP_004179948.1 CDS Isop_2833 NC_014962.1 4137855 4138646 D COGs: COG0212 5-formyltetrahydrofolate cyclo-ligase; InterPro IPR002698; KEGG: rxy:Rxyl_1321 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; SPTR: 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; manually curated; PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase; 5-formyltetrahydrofolate cyclo-ligase 4137855..4138646 Isosphaera pallida ATCC 43644 10156975 YP_004179949.1 CDS Isop_2834 NC_014962.1 4138870 4140369 D COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase; InterPro IPR019818: IPR001804: IPR014273; KEGG: mrb:Mrub_1134 isocitrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; PRIAM: Isocitrate dehydrogenase (NADP(+)); SPTR: Isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase; isocitrate dehydrogenase 4138870..4140369 Isosphaera pallida ATCC 43644 10156976 YP_004179950.1 CDS Isop_2835 NC_014962.1 4140392 4142335 R COGs: COG0326 Molecular chaperone HSP90 family; InterPro IPR020575: IPR001404: IPR003594: IPR020576; KEGG: plm:Plim_1800 heat shock protein HSP90; PFAM: Heat shock protein Hsp90-like; ATP-binding region ATPase domain protein; SPTR: Chaperone protein htpG; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein; Heat shock protein Hsp90 complement(4140392..4142335) Isosphaera pallida ATCC 43644 10156977 YP_004179951.1 CDS Isop_2836 NC_014962.1 4142547 4143722 D COGs: COG3342 conserved hypothetical protein; InterPro IPR010430: IPR002477; KEGG: tro:trd_A0702 major pilin protein FimA; PFAM: protein of unknown function DUF1028; Peptidoglycan-binding domain 1 protein; SPTR: Major pilin protein FimA; PFAM: Putative peptidoglycan binding domain; Family of unknown function (DUF1028); hypothetical protein 4142547..4143722 Isosphaera pallida ATCC 43644 10156978 YP_004179952.1 CDS Isop_2837 NC_014962.1 4144006 4145634 R COGs: COG0459 Chaperonin GroEL (HSP60 family); InterPro IPR001844: IPR018370: IPR002423; KEGG: psl:Psta_3731 chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; SPTR: 60 kDa chaperonin; TIGRFAM: chaperonin GroEL; PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL; chaperonin GroEL complement(4144006..4145634) Isosphaera pallida ATCC 43644 10156979 YP_004179953.1 CDS Isop_2838 NC_014962.1 4145780 4146073 R COGs: COG0234 Co-chaperonin GroES (HSP10); InterPro IPR001476: IPR018369: IPR020818; KEGG: rba:RB10627 GroES/HSP10-like protein; PFAM: Chaperonin Cpn10; SPTR: 10 kDa chaperonin 2; PFAM: Chaperonin 10 Kd subunit; chaperonin Cpn10 complement(4145780..4146073) Isosphaera pallida ATCC 43644 10156980 YP_004179954.1 CDS Isop_2839 NC_014962.1 4146777 4148285 D COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478: IPR001940: IPR001254; KEGG: psl:Psta_3916 2-alkenal reductase; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; SPTR: 2-alkenal reductase; PFAM: Trypsin; peptidase S1 and S6 chymotrypsin/Hap 4146777..4148285 Isosphaera pallida ATCC 43644 10156981 YP_004179955.1 CDS Isop_2840 NC_014962.1 4148466 4149374 R COGs: COG2908 conserved hypothetical protein; KEGG: aba:Acid345_4016 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4148466..4149374) Isosphaera pallida ATCC 43644 10156982 YP_004179956.1 CDS Isop_2841 NC_014962.1 4149733 4154460 R COGs: COG1201 Lhr-like helicase; InterProIPR014021: IPR001650: IPR014001: IPR003593: IPR 011545: IPR013701; KEGG: sth:STH886 ATP-dependent DNA helicase; PFAM: DEAD/H associated domain protein; DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; AAA ATPase; helicase domain protein; SPTR: ATP-dependent DNA helicase; PFAM: Helicase conserved C-terminal domain; DEAD/H associated; DEAD/DEAH box helicase; DEAD/DEAH box helicase complement(4149733..4154460) Isosphaera pallida ATCC 43644 10156983 YP_004179957.1 CDS Isop_2842 NC_014962.1 4154675 4155670 D COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: rrs:RoseRS_0359 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family; NAD-dependent epimerase/dehydratase 4154675..4155670 Isosphaera pallida ATCC 43644 10156984 YP_004179958.1 CDS Isop_2843 NC_014962.1 4155708 4156868 R COGs: COG0327 conserved hypothetical protein; InterPro IPR002678: IPR017221; KEGG: plm:Plim_2674 protein of unknown function DUF34; PFAM: protein of unknown function DUF34; SPTR: Putative uncharacterized protein; PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family; hypothetical protein complement(4155708..4156868) Isosphaera pallida ATCC 43644 10156985 YP_004179959.1 CDS Isop_2844 NC_014962.1 4156915 4157856 R COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR018300: IPR001544; KEGG: rxy:Rxyl_0760 aminotransferase, class IV; PFAM: aminotransferase class IV; SPTR: Aminotransferase, class IV; PFAM: Aminotransferase class IV; class IV aminotransferase complement(4156915..4157856) Isosphaera pallida ATCC 43644 10156986 YP_004179960.1 CDS Isop_2845 NC_014962.1 4157853 4159181 R KEGG: psl:Psta_1684 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4157853..4159181) Isosphaera pallida ATCC 43644 10156987 YP_004179961.1 CDS Isop_2846 NC_014962.1 4159230 4160318 R COGs: COG2309 Leucyl aminopeptidase (aminopeptidase T); InterPro IPR000787: IPR018313; KEGG: cwo:Cwoe_1076 peptidase M29 aminopeptidase II; PFAM: peptidase M29 aminopeptidase II; SPTR: Peptidase M29 aminopeptidase II; PFAM: Thermophilic metalloprotease (M29); peptidase M29 aminopeptidase II complement(4159230..4160318) Isosphaera pallida ATCC 43644 10156988 YP_004179962.1 CDS Isop_2847 NC_014962.1 4160428 4161363 R COGs: COG0705 membrane protein; InterPro IPR013838: IPR002610; KEGG: plm:Plim_1385 rhomboid family protein; PFAM: Rhomboid family protein; SPTR: Probable glpG protein; PFAM: Protein of unknown function (DUF3582); Rhomboid family; rhomboid family protein complement(4160428..4161363) Isosphaera pallida ATCC 43644 10156989 YP_004179963.1 CDS Isop_2848 NC_014962.1 4161783 4163432 D KEGG: nha:Nham_2630 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2029); hypothetical protein 4161783..4163432 Isosphaera pallida ATCC 43644 10156990 YP_004179964.1 CDS Isop_2849 NC_014962.1 4163716 4164111 D KEGG: ebi:EbC_16470 ribonuclease E; SPTR: Chromosome 17 SCAF15006, whole genome shotgun sequence; ribonuclease E 4163716..4164111 Isosphaera pallida ATCC 43644 10156991 YP_004179965.1 CDS Isop_2850 NC_014962.1 4164231 4164947 R COGs: COG0571 dsRNA-specific ribonuclease; InterPro IPR001159: IPR000999: IPR011907; KEGG: psl:Psta_3659 ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein; PRIAM: Ribonuclease III; SMART: ribonuclease III; double-stranded RNA binding domain protein; SPTR: Ribonuclease III; TIGRFAM: ribonuclease III; PFAM: RNase3 domain; Double-stranded RNA binding motif; TIGRFAM: ribonuclease III, bacterial; RNAse III complement(4164231..4164947) Isosphaera pallida ATCC 43644 10156992 YP_004179966.1 CDS Isop_2851 NC_014962.1 4165196 4165765 D COGs: COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); InterProIPR011768: IPR013185: IPR001059: IPR015365: IPR 020599; KEGG: rba:RB12577 translation elongation factor EF-P; PFAM: Elongation factor P; Elongation factor P/YeiP protein; Elongation factor KOW-like domain-containing protein; SPTR: Translation elongation factor EF-P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P; translation elongation factor P 4165196..4165765 Isosphaera pallida ATCC 43644 10156993 YP_004179967.1 CDS Isop_2852 NC_014962.1 4165851 4167620 R COGs: COG3281 Uncharacterized protein probably involved in trehalose biosynthesis; InterPro IPR002575; KEGG: afw:Anae109_3070 1,4-alpha-glucan branching enzyme; PFAM: aminoglycoside phosphotransferase; SPTR: 1,4-alpha-glucan branching enzyme; manually curated; TIGRFAM: trehalose synthase-fused probable maltokinase; aminoglycoside phosphotransferase complement(4165851..4167620) Isosphaera pallida ATCC 43644 10156994 YP_004179968.1 CDS Isop_2853 NC_014962.1 4167716 4169266 R KEGG: tva:TVAG_078700 hypothetical protein; SPTR: Predicted protein; hypothetical protein complement(4167716..4169266) Isosphaera pallida ATCC 43644 10156995 YP_004179969.1 CDS Isop_2854 NC_014962.1 4169366 4170121 R COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627: IPR013249: IPR014284; KEGG: psl:Psta_0222 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; manually curated; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; ECF subfamily RNA polymerase sigma-24 factor complement(4169366..4170121) Isosphaera pallida ATCC 43644 10156996 YP_004179970.1 CDS Isop_2855 NC_014962.1 4170397 4171128 R COGs: COG0177 EndoIII-related endonuclease; KEGG: dma:DMR_17660 putative DNA glycosylase; SPTR: HhH-GPD protein; putative DNA glycosylase complement(4170397..4171128) Isosphaera pallida ATCC 43644 10156997 YP_004179971.1 CDS Isop_2856 NC_014962.1 4171429 4173888 D InterPro IPR011444; KEGG: sus:Acid_1145 hypothetical protein; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Protein of unknown function (DUF1553); hypothetical protein 4171429..4173888 Isosphaera pallida ATCC 43644 10156998 YP_004179972.1 CDS Isop_2858 NC_014962.1 4175513 4175647 R hypothetical protein complement(4175513..4175647) Isosphaera pallida ATCC 43644 10157000 YP_004179973.1 CDS Isop_2859 NC_014962.1 4175677 4176300 D InterPro IPR019734: IPR013026; KEGG: psl:Psta_2415 tetratricopeptide TPR_2 repeat protein; SPTR: Tetratricopeptide TPR_2 repeat protein; hypothetical protein 4175677..4176300 Isosphaera pallida ATCC 43644 10157001 YP_004179974.1 CDS Isop_2860 NC_014962.1 4176391 4177869 D KEGG: plm:Plim_0513 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: MotA/TolQ/ExbB proton channel family; hypothetical protein 4176391..4177869 Isosphaera pallida ATCC 43644 10157002 YP_004179975.1 CDS Isop_2861 NC_014962.1 4177953 4178705 D InterPro IPR008009; KEGG: sus:Acid_6164 Ig family protein; PFAM: Ig family protein; SPTR: Ig family protein; PFAM: Putative Ig domain; Ig family protein 4177953..4178705 Isosphaera pallida ATCC 43644 10157003 YP_004179976.1 CDS Isop_2862 NC_014962.1 4178827 4179843 R InterPro IPR001120: IPR012902; KEGG: psl:Psta_4737 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein complement(4178827..4179843) Isosphaera pallida ATCC 43644 10157004 YP_004179977.1 CDS Isop_2863 NC_014962.1 4179862 4180047 R hypothetical protein complement(4179862..4180047) Isosphaera pallida ATCC 43644 10157005 YP_004179978.1 CDS Isop_2864 NC_014962.1 4180044 4181612 R COGs: COG0519 GMP synthase PP-ATPase domain/subunit; InterProIPR017926: IPR011702: IPR006220: IPR001317: IPR 000991: IPR001674: IPR004739; KEGG: psl:Psta_2814 GMP synthase, large subunit; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I; SPTR: GMP synthase, large subunit; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: Glutamine amidotransferase class-I; GMP synthase C terminal domain; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit; GMP synthase complement(4180044..4181612) Isosphaera pallida ATCC 43644 10157006 YP_004179979.1 CDS Isop_2865 NC_014962.1 4181981 4184506 D COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR014016: IPR014017: IPR000212; KEGG: rba:RB12363 ATP-dependent DNA helicase; PFAM: UvrD/REP helicase; SPTR: ATP-dependent DNA helicase; PFAM: UvrD/REP helicase; UvrD/REP helicase 4181981..4184506 Isosphaera pallida ATCC 43644 10157007 YP_004179980.1 CDS Isop_2866 NC_014962.1 4184514 4185776 D COGs: COG0520 Selenocysteine lyase; InterPro IPR000192; KEGG: rrs:RoseRS_1377 aminotransferase, class V; PFAM: aminotransferase class V; SPTR: Aminotransferase, class V; PFAM: Aminotransferase class-V; class V aminotransferase 4184514..4185776 Isosphaera pallida ATCC 43644 10157008 YP_004179981.1 CDS Isop_2867 NC_014962.1 4185834 4187006 R COGs: COG3616 amino acid aldolase or racemase; InterPro IPR001608; KEGG: psl:Psta_1894 alanine racemase domain protein; PFAM: alanine racemase domain protein; SPTR: D-threonine aldolase, metal-activated pyridoxal enzyme; PFAM: Alanine racemase, N-terminal domain; alanine racemase domain-containing protein complement(4185834..4187006) Isosphaera pallida ATCC 43644 10157009 YP_004179982.1 CDS Isop_2868 NC_014962.1 4187265 4187540 R hypothetical protein complement(4187265..4187540) Isosphaera pallida ATCC 43644 10157010 YP_004179983.1 CDS Isop_2869 NC_014962.1 4187545 4188537 R COGs: COG1319 Aerobic-type carbon monoxide dehydrogenase middle subunit CoxM/CutM homologs; InterPro IPR016166: IPR002346; KEGG: sus:Acid_2421 molybdopterin dehydrogenase, FAD-binding; PFAM: molybdopterin dehydrogenase FAD-binding; SPTR: Molybdopterin dehydrogenase, FAD-binding; PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain; TIGRFAM: 4-hydroxybenzoyl-CoA reductase, beta subunit; molybdopterin dehydrogenase FAD-binding protein complement(4187545..4188537) Isosphaera pallida ATCC 43644 10157011 YP_004179984.1 CDS Isop_2870 NC_014962.1 4188542 4190716 R COGs: COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs; InterPro IPR000674: IPR008274; KEGG: sus:Acid_2420 xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; SPTR: Xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; aldehyde oxidase and xanthine dehydrogenase molybdopterin-binding subunit complement(4188542..4190716) Isosphaera pallida ATCC 43644 10157012 YP_004179985.1 CDS Isop_2871 NC_014962.1 4190720 4191382 R COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; InterProIPR001041: IPR017909: IPR006058: IPR019546: IPR 002888: IPR006311; KEGG: sus:Acid_2419 2Fe-2S iron-sulfur cluster binding domain-containing protein; PFAM: [2Fe-2S]-binding domain-containing protein; ferredoxin; Twin-arginine translocation pathway, signal sequence, subgroup; SPTR: (2Fe-2S)-binding domain protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; (2Fe-2S)-binding domain-containing protein complement(4190720..4191382) Isosphaera pallida ATCC 43644 10157013 YP_004179986.1 CDS Isop_2872 NC_014962.1 4191966 4193687 R COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterProIPR000253: IPR003018: IPR001932: IPR019756: IPR 010822; KEGG: psl:Psta_4013 protein serine phosphatase with GAF(s) sensor(s); PFAM: Stage II sporulation protein E; Forkhead-associated protein; SMART: protein phosphatase 2C domain protein; Forkhead-associated protein; GAF domain protein; SPTR: Protein serine phosphatase with GAF(S) sensor(S); PFAM: GAF domain; Stage II sporulation protein E (SpoIIE); FHA domain; protein serine phosphatase with GAF(s) sensor(s) complement(4191966..4193687) Isosphaera pallida ATCC 43644 10157014 YP_004179987.1 CDS Isop_2873 NC_014962.1 4193816 4195096 R InterPro IPR005135; KEGG: cyt:cce_3495 phytase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Phytase; endonuclease/exonuclease/phosphatase complement(4193816..4195096) Isosphaera pallida ATCC 43644 10157015 YP_004179988.1 CDS Isop_2874 NC_014962.1 4195245 4196099 R KEGG: dan:Dana_GF19228 GF19228 gene product from transcript GF19228-RA; SPTR: GF19228; hypothetical protein complement(4195245..4196099) Isosphaera pallida ATCC 43644 10157016 YP_004179989.1 CDS Isop_2875 NC_014962.1 4196418 4197494 R COGs: COG4864 conserved hypothetical protein; KEGG: plm:Plim_0858 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: SigmaW regulon antibacterial; hypothetical protein complement(4196418..4197494) Isosphaera pallida ATCC 43644 10157017 YP_004179990.1 CDS Isop_2876 NC_014962.1 4197840 4199300 R COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478: IPR001940: IPR001254; KEGG: nhl:Nhal_1160 protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: Protease Do; PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family; peptidase S1 and S6 chymotrypsin/Hap complement(4197840..4199300) Isosphaera pallida ATCC 43644 10157018 YP_004179991.1 CDS Isop_2877 NC_014962.1 4199521 4201008 R COGs: COG0305 Replicative DNA helicase; InterPro IPR007694: IPR003593: IPR007693: IPR007692; KEGG: tjr:TherJR_2972 replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase; SPTR: Replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase; replicative DNA helicase complement(4199521..4201008) Isosphaera pallida ATCC 43644 10157019 YP_004179992.1 CDS Isop_2878 NC_014962.1 4201632 4202240 R COGs: COG0359 Ribosomal protein L9; InterPro IPR020594: IPR020070; KEGG: psl:Psta_2667 ribosomal protein L9; PFAM: Ribosomal protein L9-like; SPTR: Ribosomal protein L9; TIGRFAM: ribosomal protein L9; PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9; 50S ribosomal protein L9 complement(4201632..4202240) Isosphaera pallida ATCC 43644 10157020 YP_004179993.1 CDS Isop_2879 NC_014962.1 4202795 4204561 D COGs: COG1115 Na+/alanine symporter; InterPro IPR001463; KEGG: srm:SRM_01478 sodium/alanine symporter; PFAM: sodium:alanine symporter; SPTR: Sodium/alanine symporter; TIGRFAM: amino acid carrier protein; PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein; amino acid carrier protein 4202795..4204561 Isosphaera pallida ATCC 43644 10157021 YP_004179994.1 CDS Isop_2880 NC_014962.1 4204738 4205808 R InterPro IPR019775: IPR005135; KEGG: ank:AnaeK_2753 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/Exonuclease/phosphatase family; endonuclease/exonuclease/phosphatase complement(4204738..4205808) Isosphaera pallida ATCC 43644 10157022 YP_004179995.1 CDS Isop_2881 NC_014962.1 4206326 4207765 D InterPro IPR019734: IPR013026: IPR001440; KEGG: plm:Plim_0675 tetratricopeptide domain protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Tetratricopeptide TPR_4; hypothetical protein 4206326..4207765 Isosphaera pallida ATCC 43644 10157023 YP_004179996.1 CDS Isop_2882 NC_014962.1 4208068 4208355 D InterPro IPR002583; KEGG: psl:Psta_4646 ribosomal protein S20; PFAM: ribosomal protein S20; SPTR: 30S ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20; 30S ribosomal protein S20 4208068..4208355 Isosphaera pallida ATCC 43644 10157024 YP_004179997.1 CDS Isop_2883 NC_014962.1 4208536 4208787 D KEGG: psl:Psta_2920 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4208536..4208787 Isosphaera pallida ATCC 43644 10157025 YP_004179998.1 CDS Isop_2884 NC_014962.1 4209005 4210312 D COGs: COG1262 conserved hypothetical protein; InterPro IPR005532: IPR017806; KEGG: sro:Sros_0331 hypothetical protein; PFAM: protein of unknown function DUF323; SPTR: Putative uncharacterized protein; PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: conserved hypothetical protein TIGR03440; hypothetical protein 4209005..4210312 Isosphaera pallida ATCC 43644 10157026 YP_004179999.1 CDS Isop_2885 NC_014962.1 4210471 4211958 D COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR016160: IPR015590; KEGG: bts:Btus_0370 succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: Succinic semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase family; TIGRFAM: succinate-semialdehyde dehydrogenase; succinate semialdehyde dehydrogenase 4210471..4211958 Isosphaera pallida ATCC 43644 10157027 YP_004180000.1 CDS Isop_2886 NC_014962.1 4212084 4213073 D COGs: COG1597 Sphingosine kinase; InterPro IPR001206; KEGG: nhl:Nhal_1571 diacylglycerol kinase catalytic region; PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; SPTR: Diacylglycerol kinase catalytic region; PFAM: Diacylglycerol kinase catalytic domain; TIGRFAM: lipid kinase, YegS/Rv2252/BmrU family; diacylglycerol kinase catalytic subunit 4212084..4213073 Isosphaera pallida ATCC 43644 10157028 YP_004180001.1 CDS Isop_2887 NC_014962.1 4213812 4214441 R KEGG: mav:MAV_2634 cytochrome P450; SPTR: Putative uncharacterized protein; hypothetical protein complement(4213812..4214441) Isosphaera pallida ATCC 43644 10157030 YP_004180002.1 CDS Isop_2888 NC_014962.1 4214551 4217637 R InterPro IPR011682; KEGG: psl:Psta_3607 hypothetical protein; PFAM: glycosyl hydrolase 38 domain protein; SPTR: Putative uncharacterized protein; glycoside hydrolase family protein complement(4214551..4217637) Isosphaera pallida ATCC 43644 10157031 YP_004180003.1 CDS Isop_2889 NC_014962.1 4217642 4218463 R COGs: COG3132 conserved hypothetical protein; InterPro IPR007432; KEGG: psl:Psta_3246 hypothetical protein; PFAM: protein of unknown function DUF480; SPTR: Putative uncharacterized protein; manually curated; PFAM: Protein of unknown function, DUF480; hypothetical protein complement(4217642..4218463) Isosphaera pallida ATCC 43644 10157032 YP_004180004.1 CDS Isop_2890 NC_014962.1 4218687 4219250 R COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR000424: IPR011344; KEGG: amu:Amuc_1863 single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; SPTR: Single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); ssDNA-binding protein complement(4218687..4219250) Isosphaera pallida ATCC 43644 10157033 YP_004180005.1 CDS Isop_2891 NC_014962.1 4219535 4219939 R COGs: COG0360 Ribosomal protein S6; InterPro IPR020814: IPR000529; KEGG: plm:Plim_2627 ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like; SPTR: 30S ribosomal protein S6; TIGRFAM: ribosomal protein S6; manually curated; PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6; 30S ribosomal protein S6 complement(4219535..4219939) Isosphaera pallida ATCC 43644 10157034 YP_004180006.1 CDS Isop_2892 NC_014962.1 4220156 4220809 R COGs: COG0193 Peptidyl-tRNA hydrolase; InterPro IPR001328: IPR018171; KEGG: plm:Plim_2628 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase; PRIAM: Aminoacyl-tRNA hydrolase; SPTR: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase complement(4220156..4220809) Isosphaera pallida ATCC 43644 10157035 YP_004180007.1 CDS Isop_2893 NC_014962.1 4220999 4221607 R COGs: COG1825 Ribosomal protein L25 (general stress protein Ctc); InterPro IPR001021: IPR020055; KEGG: plm:Plim_2629 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal protein L25-like; SPTR: 50S ribosomal protein L25; TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form; ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 complement(4220999..4221607) Isosphaera pallida ATCC 43644 10157036 YP_004180008.1 CDS Isop_2894 NC_014962.1 4222119 4223798 D InterPro IPR000601: IPR002126; KEGG: sro:Sros_4284 hypothetical protein; PFAM: Cadherin; SPTR: Putative uncharacterized protein; cadherin 4222119..4223798 Isosphaera pallida ATCC 43644 10157037 YP_004180009.1 CDS Isop_2895 NC_014962.1 4223965 4225101 R COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: csa:Csal_0494 glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase; SPTR: Probable D-amino acid oxidase; manually curated; PFAM: FAD dependent oxidoreductase; TIGRFAM: glycine oxidase ThiO; FAD dependent oxidoreductase complement(4223965..4225101) Isosphaera pallida ATCC 43644 10157038 YP_004180010.1 CDS Isop_2896 NC_014962.1 4225455 4227521 D InterPro IPR017936: IPR000866; KEGG: psl:Psta_2574 redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Redoxin domain protein; PFAM: AhpC/TSA family; alkyl hydroperoxide reductase 4225455..4227521 Isosphaera pallida ATCC 43644 10157039 YP_004180011.1 CDS Isop_2897 NC_014962.1 4227888 4228496 D KEGG: mxa:MXAN_7038 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4227888..4228496 Isosphaera pallida ATCC 43644 10157040 YP_004180012.1 CDS Isop_2898 NC_014962.1 4228857 4229351 D KEGG: gvi:glr4062 hypothetical protein; SPTR: Glr4062 protein; hypothetical protein 4228857..4229351 Isosphaera pallida ATCC 43644 10157041 YP_004180013.1 CDS Isop_2899 NC_014962.1 4229279 4229644 R KEGG: dpe:Dper_GL23628 GL23628 gene product from transcript GL23628-RA; SPTR: GL23628; hypothetical protein complement(4229279..4229644) Isosphaera pallida ATCC 43644 10157042 YP_004180014.1 CDS Isop_2900 NC_014962.1 4229634 4231535 R COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467: IPR004358: IPR003018: IPR003661: IPR 003594; KEGG: sit:TM1040_1854 GAF sensor hybrid histidine kinase; PFAM: histidine kinase A domain protein; GAF domain protein; ATP-binding region ATPase domain protein; SMART: histidine kinase A domain protein; GAF domain protein; ATP-binding region ATPase domain protein; SPTR: GAF sensor hybrid histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; His Kinase A (phosphoacceptor) domain; GAF sensor signal transduction histidine kinase complement(4229634..4231535) Isosphaera pallida ATCC 43644 10157043 YP_004180015.1 CDS Isop_2901 NC_014962.1 4231660 4233297 R COGs: COG0352 Thiamine monophosphate synthase; InterPro IPR003733: IPR004176; KEGG: plm:Plim_0604 thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; Clp domain protein; SPTR: Thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: Clp amino terminal domain; Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase; thiamine-phosphate pyrophosphorylase complement(4231660..4233297) Isosphaera pallida ATCC 43644 10157044 YP_004180016.1 CDS Isop_2902 NC_014962.1 4233680 4234252 D COGs: COG0386 Glutathione peroxidase; InterPro IPR000889; KEGG: sus:Acid_7250 glutathione peroxidase; PFAM: glutathione peroxidase; PRIAM: Peroxiredoxin; SPTR: Glutathione peroxidase; PFAM: Glutathione peroxidase; peroxiredoxin 4233680..4234252 Isosphaera pallida ATCC 43644 10157045 YP_004180017.1 CDS Isop_2903 NC_014962.1 4234482 4236521 R COGs: COG0845 Membrane-fusion protein; KEGG: rba:RB6978 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: RND family efflux transporter, MFP subunit; hypothetical protein complement(4234482..4236521) Isosphaera pallida ATCC 43644 10157046 YP_004180018.1 CDS Isop_2904 NC_014962.1 4236836 4238263 R InterPro IPR011701; KEGG: mta:Moth_1000 hypothetical protein; PFAM: major facilitator superfamily MFS_1; SPTR: Putative uncharacterized protein; PFAM: Bacterial protein of unknown function (DUF894); major facilitator superfamily protein complement(4236836..4238263) Isosphaera pallida ATCC 43644 10157047 YP_004180019.1 CDS Isop_2905 NC_014962.1 4238439 4239776 R COGs: COG4487 conserved hypothetical protein; InterPro IPR019219; KEGG: bbt:BBta_2038 hypothetical protein; PFAM: Protein of unknown function DUF2130; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2130); hypothetical protein complement(4238439..4239776) Isosphaera pallida ATCC 43644 10157048 YP_004180020.1 CDS Isop_2906 NC_014962.1 4239998 4241419 R KEGG: nml:Namu_0294 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4239998..4241419) Isosphaera pallida ATCC 43644 10157049 YP_004180021.1 CDS Isop_2907 NC_014962.1 4241692 4243314 R InterPro IPR011701; KEGG: psl:Psta_3978 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein complement(4241692..4243314) Isosphaera pallida ATCC 43644 10157050 YP_004180022.1 CDS Isop_2908 NC_014962.1 4243587 4244516 R COGs: COG0123 Deacetylase including yeast histone deacetylase and acetoin utilization protein; InterPro IPR000286; KEGG: cag:Cagg_1601 histone deacetylase superfamily; PFAM: histone deacetylase superfamily; PRIAM: Histone deacetylase; SPTR: Histone deacetylase superfamily; PFAM: Histone deacetylase domain; histone deacetylase complement(4243587..4244516) Isosphaera pallida ATCC 43644 10157051 YP_004180023.1 CDS Isop_2909 NC_014962.1 4244754 4246013 D COGs: COG0137 Argininosuccinate synthase; InterPro IPR018223: IPR001518; KEGG: psl:Psta_3843 argininosuccinate synthase; PFAM: argininosuccinate synthase; PRIAM: Argininosuccinate synthase; SPTR: Argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase; argininosuccinate synthase 4244754..4246013 Isosphaera pallida ATCC 43644 10157052 YP_004180024.1 CDS Isop_2910 NC_014962.1 4246392 4247054 D KEGG: dan:Dana_GF17141 GF17141 gene product from transcript GF17141-RA; SPTR: Putative uncharacterized protein; hypothetical protein 4246392..4247054 Isosphaera pallida ATCC 43644 10157053 YP_004180025.1 CDS Isop_2911 NC_014962.1 4247268 4247681 D KEGG: nve:NEMVE_v1g144703 hypothetical protein; SPTR: Predicted protein; hypothetical protein 4247268..4247681 Isosphaera pallida ATCC 43644 10157054 YP_004180026.1 CDS Isop_2912 NC_014962.1 4247958 4248650 D KEGG: pop:POPTR_549228 hypothetical protein; SPTR: Predicted protein; hypothetical protein 4247958..4248650 Isosphaera pallida ATCC 43644 10157055 YP_004180027.1 CDS Isop_2913 NC_014962.1 4249075 4252110 R COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467: IPR001789: IPR000014: IPR000700: IPR 004358: IPR001610: IPR003661: IPR003594: IPR013656: IPR013655; KEGG: rxy:Rxyl_2663 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; response regulator receiver; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; SPTR: Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; multi-sensor hybrid histidine kinase complement(4249075..4252110) Isosphaera pallida ATCC 43644 10157056 YP_004180028.1 CDS Isop_2914 NC_014962.1 4252484 4255168 D InterPro IPR017909; KEGG: psl:Psta_3531 peptidase domain protein; SPTR: Putative uncharacterized protein; hypothetical protein 4252484..4255168 Isosphaera pallida ATCC 43644 10157057 YP_004180029.1 CDS Isop_2915 NC_014962.1 4255274 4257781 D COGs: COG2319 FOG: WD40 repeat; InterProIPR019782: IPR017986: IPR009056: IPR001680: IPR 019775: IPR019781; KEGG: rrs:RoseRS_4025 NB-ARC domain-containing protein; PFAM: WD40 repeat, subgroup; SMART: WD-40 repeat-containing protein; SPTR: WD-40 repeat protein; PFAM: WD domain, G-beta repeat; Planctomycete cytochrome C; WD40 repeat-containing protein 4255274..4257781 Isosphaera pallida ATCC 43644 10157058 YP_004180030.1 CDS Isop_2916 NC_014962.1 4257955 4259280 D COGs: COG0001 Glutamate-1-semialdehyde aminotransferase; InterPro IPR005814: IPR004639; KEGG: rba:RB6831 glutamate-1-semialdehyde 2,1-aminomutase; PFAM: aminotransferase class-III; SPTR: Probable glutamate-1-semialdehyde 2,1-aminomutase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; glutamate-1-semialdehyde 2,1-aminomutase 4257955..4259280 Isosphaera pallida ATCC 43644 10157059 YP_004180031.1 CDS Isop_2917 NC_014962.1 4259315 4262278 D COGs: COG2319 FOG: WD40 repeat; InterProIPR019782: IPR017986: IPR020472: IPR001632: IPR 001680: IPR019775: IPR019781; KEGG: cag:Cagg_1814 NB-ARC domain protein; PFAM: WD40 repeat, subgroup; SMART: WD-40 repeat-containing protein; SPTR: NB-ARC domain protein; PFAM: WD domain, G-beta repeat; WD40 repeat-containing protein 4259315..4262278 Isosphaera pallida ATCC 43644 10157060 YP_004180032.1 CDS Isop_2918 NC_014962.1 4262644 4263108 D InterPro IPR001789; KEGG: cyn:Cyan7425_4416 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Putative uncharacterized protein; PFAM: Response regulator receiver domain; response regulator receiver 4262644..4263108 Isosphaera pallida ATCC 43644 10157061 YP_004180033.1 CDS Isop_2919 NC_014962.1 4263363 4264370 R InterPro IPR001120: IPR012902; KEGG: plm:Plim_0697 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein complement(4263363..4264370) Isosphaera pallida ATCC 43644 10157062 YP_004180034.1 CDS Isop_2920 NC_014962.1 4264741 4265637 D COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: phe:Phep_1694 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase domain-containing protein 4264741..4265637 Isosphaera pallida ATCC 43644 10157063 YP_004180035.1 CDS Isop_2921 NC_014962.1 4265783 4266772 R InterPro IPR011449: IPR013424; KEGG: sfl:CP0070 extracellular serine protease SepA; PFAM: protein of unknown function DUF1555; SPTR: Peptidase S1 and S6 chymotrypsin/Hap; PFAM: PEP-CTERM motif; TIGRFAM: PEP-CTERM putative exosortase interaction domain; hypothetical protein complement(4265783..4266772) Isosphaera pallida ATCC 43644 10157064 YP_004180036.1 CDS Isop_2922 NC_014962.1 4267081 4268370 D COGs: COG0628 permease; InterPro IPR002549; KEGG: pla:Plav_2158 hypothetical protein; PFAM: protein of unknown function UPF0118; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF20; hypothetical protein 4267081..4268370 Isosphaera pallida ATCC 43644 10157065 YP_004180037.1 CDS Isop_2923 NC_014962.1 4268367 4269530 D COGs: COG0709 Selenophosphate synthase; InterPro IPR000728: IPR010918: IPR004536; KEGG: adg:Adeg_0304 selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; SPTR: Selenide, water dikinase; TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: selenium donor protein; selenide, water dikinase 4268367..4269530 Isosphaera pallida ATCC 43644 10157066 YP_004180038.1 CDS Isop_2924 NC_014962.1 4269818 4270111 D COGs: COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit; InterPro IPR003837; KEGG: dal:Dalk_4494 glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; SPTR: Glutamyl-tRNA(Gln) amidotransferase, C subunit; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, C subunit; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C 4269818..4270111 Isosphaera pallida ATCC 43644 10157067 YP_004180039.1 CDS Isop_2925 NC_014962.1 4270220 4271737 D COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase; InterPro IPR004412: IPR020556: IPR000120; KEGG: chy:CHY_1102 aspartyl/glutamyl-tRNA amidotransferase subunit A; PFAM: Amidase; SPTR: Glutamyl-tRNA(Gln) amidotransferase subunit A; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit; aspartyl/glutamyl-tRNA amidotransferase subunit A 4270220..4271737 Isosphaera pallida ATCC 43644 10157068 YP_004180040.1 CDS Isop_2926 NC_014962.1 4271867 4273387 D COGs: COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog); InterPro IPR004413: IPR017958: IPR006075: IPR018027; KEGG: psl:Psta_4217 glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB region; Asn/Gln amidotransferase; SPTR: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB/GatE catalytic domain; GatB domain; TIGRFAM: glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B 4271867..4273387 Isosphaera pallida ATCC 43644 10157069 YP_004180041.1 CDS Isop_2927 NC_014962.1 4273461 4273709 D KEGG: kse:Ksed_11420 putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation); SPTR: Putative enzyme of poly-gamma-glutamate biosynthesis (Capsule formation); hypothetical protein 4273461..4273709 Isosphaera pallida ATCC 43644 10157070 YP_004180042.1 CDS Isop_2928 NC_014962.1 4273694 4274671 R COGs: COG4974 Site-specific recombinase XerD; InterPro IPR004107: IPR002104; KEGG: plm:Plim_1185 tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; SPTR: Integrase/recombinase; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; tyrosine recombinase XerD subunit complement(4273694..4274671) Isosphaera pallida ATCC 43644 10157071 YP_004180043.1 CDS Isop_2929 NC_014962.1 4274668 4276089 R COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR000644: IPR002550: IPR005170; KEGG: syp:SYNPCC7002_A0033 hypothetical protein; PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; SPTR: Putative uncharacterized protein; PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; hypothetical protein complement(4274668..4276089) Isosphaera pallida ATCC 43644 10157072 YP_004180044.1 CDS Isop_2930 NC_014962.1 4276216 4276992 R KEGG: rsp:RSP_3995 hypothetical protein; SPTR: Cytochrome c family protein, putative; PFAM: Protein of unknown function (DUF3365); hypothetical protein complement(4276216..4276992) Isosphaera pallida ATCC 43644 10157073 YP_004180045.1 CDS Isop_2931 NC_014962.1 4276965 4277549 R COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: rba:RB11225 hypothetical protein; SMART: Rhodanese domain protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2892); Rhodanese-like domain; rhodanese domain-containing protein complement(4276965..4277549) Isosphaera pallida ATCC 43644 10157074 YP_004180046.1 CDS Isop_2932 NC_014962.1 4277908 4278609 D KEGG: ana:alr7304 hypothetical protein; SPTR: Alr7304 protein; hypothetical protein 4277908..4278609 Isosphaera pallida ATCC 43644 10157075 YP_004180047.1 CDS Isop_2933 NC_014962.1 4278687 4279223 R KEGG: psl:Psta_3808 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4278687..4279223) Isosphaera pallida ATCC 43644 10157076 YP_004180048.1 CDS Isop_2934 NC_014962.1 4279695 4281107 D COGs: COG1236 exonuclease of the beta-lactamase fold involved in RNA processing; InterPro IPR011108; KEGG: scl:sce4166 hypothetical protein; PFAM: RNA-metabolising metallo-beta-lactamase; SPTR: Exonuclease of the beta-lactamase fold involved in RNA processing; PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain; RNA-metabolising metallo-beta-lactamase 4279695..4281107 Isosphaera pallida ATCC 43644 10157077 YP_004180049.1 CDS Isop_2935 NC_014962.1 4281267 4283348 D COGs: COG2414 Aldehyde:ferredoxin oxidoreductase; InterPro IPR013983: IPR001203; KEGG: kfl:Kfla_2116 aldehyde ferredoxin oxidoreductase; PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; PRIAM: Aldehyde ferredoxin oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase; SPTR: Aldehyde ferredoxin oxidoreductase; PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3; aldehyde ferredoxin oxidoreductase 4281267..4283348 Isosphaera pallida ATCC 43644 10157078 YP_004180050.1 CDS Isop_2936 NC_014962.1 4283345 4283473 D hypothetical protein 4283345..4283473 Isosphaera pallida ATCC 43644 10157079 YP_004180051.1 CDS Isop_2937 NC_014962.1 4283559 4286489 D COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterProIPR016132: IPR005467: IPR001789: IPR001294: IPR 003018: IPR003661: IPR003594: IPR013654; KEGG: alv:Alvin_0435 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; PAS fold-2 domain protein; response regulator receiver; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; GAF domain protein; SPTR: Multi-sensor hybrid histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; GAF domain; Phytochrome region; His Kinase A (phosphoacceptor) domain; PAS fold; multi-sensor hybrid histidine kinase 4283559..4286489 Isosphaera pallida ATCC 43644 10157080 YP_004180052.1 CDS Isop_2938 NC_014962.1 4286614 4287990 R KEGG: rxy:Rxyl_2987 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2088); hypothetical protein complement(4286614..4287990) Isosphaera pallida ATCC 43644 10157081 YP_004180053.1 CDS Isop_2939 NC_014962.1 4288247 4289131 D COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: nde:NIDE3680 putative ubiquinone/menaquinone biosynthesis methyltransferase UbiE; PFAM: Methyltransferase type 11; SPTR: CalE5; PFAM: Methyltransferase domain; type 11 methyltransferase 4288247..4289131 Isosphaera pallida ATCC 43644 10157082 YP_004180054.1 CDS Isop_2940 NC_014962.1 4289048 4289290 R KEGG: act:ACLA_050540 Rho guanyl nucleotide exchange factor, putative; SPTR: Kyphoscoliosis peptidase; Rho guanyl nucleotide exchange factor complement(4289048..4289290) Isosphaera pallida ATCC 43644 10157083 YP_004180055.1 CDS Isop_2941 NC_014962.1 4289348 4289479 R KEGG: mar:MAE_56260 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4289348..4289479) Isosphaera pallida ATCC 43644 10157084 YP_004180056.1 CDS Isop_2942 NC_014962.1 4289476 4290930 R COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: psl:Psta_4602 sulfatase; PFAM: sulfatase; SPTR: Heparan N-sulfatase; PFAM: Sulfatase; sulfatase complement(4289476..4290930) Isosphaera pallida ATCC 43644 10157085 YP_004180057.1 CDS Isop_2943 NC_014962.1 4290982 4292454 R InterPro IPR001915; KEGG: psl:Psta_0022 peptidase M48 Ste24p; PFAM: peptidase M48 Ste24p; SPTR: Peptidase M48 Ste24p; PFAM: Peptidase family M48; peptidase M48 Ste24p complement(4290982..4292454) Isosphaera pallida ATCC 43644 10157086 YP_004180058.1 CDS Isop_2944 NC_014962.1 4292914 4293624 R KEGG: sus:Acid_7948 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4292914..4293624) Isosphaera pallida ATCC 43644 10157087 YP_004180059.1 CDS Isop_2945 NC_014962.1 4293822 4294610 R KEGG: aba:Acid345_0765 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1326); hypothetical protein complement(4293822..4294610) Isosphaera pallida ATCC 43644 10157088 YP_004180060.1 CDS Isop_2946 NC_014962.1 4295113 4295994 R KEGG: plm:Plim_3179 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4295113..4295994) Isosphaera pallida ATCC 43644 10157089 YP_004180061.1 CDS Isop_2947 NC_014962.1 4296288 4297982 R COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478: IPR001940: IPR001254; KEGG: cts:Ctha_2056 protease Do; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; PRIAM: HtrA2 peptidase; SMART: PDZ/DHR/GLGF domain protein; SPTR: Similar to serine proteinase HtrA/DegQ/DegS family; PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family; HtrA2 peptidase complement(4296288..4297982) Isosphaera pallida ATCC 43644 10157090 YP_004180062.1 CDS Isop_2948 NC_014962.1 4298435 4299556 D COGs: COG0820 Fe-S-cluster redox enzyme; InterPro IPR007197: IPR004383; KEGG: ade:Adeh_4229 ribosomal RNA large subunit methyltransferase N; PFAM: Radical SAM domain protein; SPTR: Probable RNA methyltransferase Adeh_4229; PFAM: Radical SAM superfamily; TIGRFAM: radical SAM enzyme, Cfr family; radical SAM protein 4298435..4299556 Isosphaera pallida ATCC 43644 10157091 YP_004180063.1 CDS Isop_2949 NC_014962.1 4299729 4302842 D COGs: COG0515 Serine/threonine protein kinase; InterProIPR019734: IPR000719: IPR013026: IPR020635: IPR 002290: IPR008271: IPR017442; KEGG: plm:Plim_3456 serine/threonine protein kinase-related protein; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; Tetratricopeptide repeat; SPTR: Serine/threonine protein kinase-related protein; PFAM: Protein kinase domain; serine/threonine protein kinase 4299729..4302842 Isosphaera pallida ATCC 43644 10157092 YP_004180064.1 CDS Isop_2950 NC_014962.1 4303080 4304678 D COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: plm:Plim_0558 efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter MFP subunit 4303080..4304678 Isosphaera pallida ATCC 43644 10157093 YP_004180065.1 CDS Isop_2951 NC_014962.1 4304854 4308219 D COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: plm:Plim_0559 acriflavin resistance protein; PFAM: acriflavin resistance protein; SPTR: Acriflavin resistance protein; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; acriflavin resistance protein 4304854..4308219 Isosphaera pallida ATCC 43644 10157094 YP_004180066.1 CDS Isop_2952 NC_014962.1 4308233 4309714 R COGs: COG1989 Type II secretory pathway prepilin signal peptidase PulO and related peptidase; InterPro IPR010627; KEGG: plm:Plim_1574 peptidase A24A domain protein; PFAM: peptidase A24A domain protein; SPTR: Peptidase A24A domain protein; PFAM: Bacterial Peptidase A24 N-terminal domain; peptidase A24A domain-containing protein complement(4308233..4309714) Isosphaera pallida ATCC 43644 10157095 YP_004180067.1 CDS Isop_2953 NC_014962.1 4309711 4312083 R COGs: COG1668 ABC-type Na+ efflux pump permease component; InterPro IPR003675; KEGG: psl:Psta_1550 abortive infection protein; PFAM: Abortive infection protein; SPTR: Abortive infection protein; PFAM: CAAX amino terminal protease family; abortive infection protein complement(4309711..4312083) Isosphaera pallida ATCC 43644 10157096 YP_004180068.1 CDS Isop_2954 NC_014962.1 4312114 4312902 R COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: rba:RB6469 sodium ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Sodium ABC transporter ATP-binding protein; PFAM: ABC transporter; ABC transporter-like protein complement(4312114..4312902) Isosphaera pallida ATCC 43644 10157097 YP_004180069.1 CDS Isop_2955 NC_014962.1 4313003 4313419 R InterPro IPR002645; KEGG: psl:Psta_3468 anti-sigma-factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: Putative uncharacterized protein; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; sulfate transporter/antisigma-factor antagonist STAS complement(4313003..4313419) Isosphaera pallida ATCC 43644 10157098 YP_004180070.1 CDS Isop_2956 NC_014962.1 4313802 4314443 D COGs: COG0461 Orotate phosphoribosyltransferase; InterPro IPR000836: IPR004467; KEGG: psl:Psta_1790 orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; PRIAM: Orotate phosphoribosyltransferase; SPTR: Orotate phosphoribosyltransferase; TIGRFAM: orotate phosphoribosyltransferase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase; orotate phosphoribosyltransferase 4313802..4314443 Isosphaera pallida ATCC 43644 10157099 YP_004180071.1 CDS Isop_2957 NC_014962.1 4314802 4315872 D InterPro IPR000551: IPR006158; KEGG: mei:Msip34_1308 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; cobalamin B12-binding domain protein; SMART: regulatory protein MerR; SPTR: Transcriptional regulator, MerR family; PFAM: MerR family regulatory protein; regulatory protein MerR 4314802..4315872 Isosphaera pallida ATCC 43644 10157100 YP_004180072.1 CDS Isop_2958 NC_014962.1 4316140 4316541 R KEGG: gob:Gobs_0374 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4316140..4316541) Isosphaera pallida ATCC 43644 10157101 YP_004180073.1 CDS Isop_2959 NC_014962.1 4316968 4317240 R KEGG: tgo:TGME49_023650 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4316968..4317240) Isosphaera pallida ATCC 43644 10157102 YP_004180074.1 CDS Isop_2960 NC_014962.1 4317455 4319074 D KEGG: rno:364996 CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae); SPTR: UDP-galactose 4-epimerase; hypothetical protein 4317455..4319074 Isosphaera pallida ATCC 43644 10157103 YP_004180075.1 CDS Isop_2961 NC_014962.1 4319236 4319934 D KEGG: aor:AO090001000240 uncharacterized mRNA-associated protein RAP55; SPTR: Putative uncharacterized protein; hypothetical protein 4319236..4319934 Isosphaera pallida ATCC 43644 10157104 YP_004180076.1 CDS Isop_2962 NC_014962.1 4320214 4321086 R COGs: COG0400 esterase; InterPro IPR003140; KEGG: psl:Psta_4332 phospholipase/carboxylesterase; PFAM: phospholipase/Carboxylesterase; SPTR: Putative uncharacterized protein; PFAM: Phospholipase/Carboxylesterase; phospholipase/carboxylesterase complement(4320214..4321086) Isosphaera pallida ATCC 43644 10157105 YP_004180077.1 CDS Isop_2963 NC_014962.1 4321423 4323036 R KEGG: gsu:GSU3219 fibronectin type III domain-containing protein; SPTR: Fibronectin type III domain protein; PFAM: CARDB; hypothetical protein complement(4321423..4323036) Isosphaera pallida ATCC 43644 10157106 YP_004180078.1 CDS Isop_2964 NC_014962.1 4323383 4324111 D COGs: COG0684 Demethylmenaquinone methyltransferase; KEGG: tro:trd_0311 probable transferase protein; SPTR: Probable transferase protein; PFAM: Demethylmenaquinone methyltransferase; putative transferase protein 4323383..4324111 Isosphaera pallida ATCC 43644 10157107 YP_004180079.1 CDS Isop_2965 NC_014962.1 4324285 4325283 D COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR006140: IPR006139; KEGG: maq:Maqu_3853 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; SPTR: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 4324285..4325283 Isosphaera pallida ATCC 43644 10157108 YP_004180080.1 CDS Isop_2966 NC_014962.1 4325379 4327199 R COGs: COG0642 Signal transduction histidine kinase; InterProIPR000253: IPR005467: IPR004358: IPR003018: IPR 003594; KEGG: psl:Psta_3175 GAF sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; Forkhead-associated protein; GAF domain protein; SMART: ATP-binding region ATPase domain protein; GAF domain protein; Forkhead-associated protein; SPTR: GAF sensor signal transduction histidine kinase; PFAM: GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; FHA domain; GAF sensor signal transduction histidine kinase complement(4325379..4327199) Isosphaera pallida ATCC 43644 10157109 YP_004180081.1 CDS Isop_2967 NC_014962.1 4327605 4328663 D COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001940: IPR001254; KEGG: plm:Plim_2772 peptidase S1 and S6 chymotrypsin/Hap; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SPTR: Peptidase S1C, Do; PFAM: Trypsin; peptidase S1 and S6 chymotrypsin/Hap 4327605..4328663 Isosphaera pallida ATCC 43644 10157110 YP_004180082.1 CDS Isop_2968 NC_014962.1 4328885 4330630 D KEGG: plm:Plim_3396 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4328885..4330630 Isosphaera pallida ATCC 43644 10157111 YP_004180083.1 CDS Isop_2969 NC_014962.1 4330768 4331541 D COGs: COG4923 conserved hypothetical protein; KEGG: bph:Bphy_4094 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF429); hypothetical protein 4330768..4331541 Isosphaera pallida ATCC 43644 10157112 YP_004180084.1 CDS Isop_2970 NC_014962.1 4331591 4332985 D COGs: COG0205 6-phosphofructokinase; InterPro IPR000023: IPR012004; KEGG: psl:Psta_0329 diphosphate--fructose-6-phosphate1-phosphotransferase; PFAM: phosphofructokinase; SPTR:Diphosphate--fructose-6-phosphate1-phosphotran sferase; PFAM: Phosphofructokinase; 6-phosphofructokinase 4331591..4332985 Isosphaera pallida ATCC 43644 10157113 YP_004180085.1 CDS Isop_2971 NC_014962.1 4333161 4333355 R KEGG: psl:Psta_1683 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4333161..4333355) Isosphaera pallida ATCC 43644 10157114 YP_004180086.1 CDS Isop_2972 NC_014962.1 4333409 4333933 R KEGG: rba:RB6539 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: TM2 domain; hypothetical protein complement(4333409..4333933) Isosphaera pallida ATCC 43644 10157115 YP_004180087.1 CDS Isop_2973 NC_014962.1 4334095 4334907 D COGs: COG1385 conserved hypothetical protein; InterPro IPR006700; KEGG: bav:BAV0862 16S ribosomal RNA methyltransferase RsmE; PFAM: protein of unknown function DUF558; SPTR: Putative uncharacterized protein; PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family; hypothetical protein 4334095..4334907 Isosphaera pallida ATCC 43644 10157116 YP_004180088.1 CDS Isop_2974 NC_014962.1 4334988 4335359 D InterPro IPR002781; KEGG: hau:Haur_3774 hypothetical protein; PFAM: protein of unknown function DUF81; SPTR: Putative uncharacterized protein; PFAM: Sulfite exporter TauE/SafE; hypothetical protein 4334988..4335359 Isosphaera pallida ATCC 43644 10157117 YP_004180089.1 CDS Isop_2975 NC_014962.1 4335517 4336326 R KEGG: amd:AMED_8114 hypothetical protein; SPTR: Putative thymidylate kinase; hypothetical protein complement(4335517..4336326) Isosphaera pallida ATCC 43644 10157118 YP_004180090.1 CDS Isop_2976 NC_014962.1 4336910 4337191 R InterPro IPR001845; KEGG: plm:Plim_2033 regulatory protein ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Regulatory protein ArsR; PFAM: Bacterial regulatory protein, arsR family; regulatory protein ArsR complement(4336910..4337191) Isosphaera pallida ATCC 43644 10157119 YP_004180091.1 CDS Isop_2977 NC_014962.1 4337531 4339408 R InterPro IPR001107; KEGG: rba:RB8770 hypothetical protein; PFAM: band 7 protein; SPTR: Putative uncharacterized protein; PFAM: SPFH domain / Band 7 family; hypothetical protein complement(4337531..4339408) Isosphaera pallida ATCC 43644 10157120 YP_004180092.1 CDS Isop_2978 NC_014962.1 4339405 4341168 R InterPro IPR001107; KEGG: psl:Psta_4418 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein; SPTR: Band 7 protein; PFAM: SPFH domain / Band 7 family; hypothetical protein complement(4339405..4341168) Isosphaera pallida ATCC 43644 10157121 YP_004180093.1 CDS Isop_2979 NC_014962.1 4341623 4342663 D COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: plm:Plim_2404 ROK family protein; PFAM: ROK family protein; SPTR: ROK family protein; manually curated; PFAM: ROK family; TIGRFAM: ROK family protein (putative glucokinase); ROK family protein 4341623..4342663 Isosphaera pallida ATCC 43644 10157122 YP_004180094.1 CDS Isop_2980 NC_014962.1 4342928 4345531 D COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467: IPR001789: IPR000014: IPR004358: IPR 003661: IPR003594: IPR013767; KEGG: psl:Psta_1412 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; response regulator receiver; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; SPTR: PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; PAS/PAC sensor hybrid histidine kinase 4342928..4345531 Isosphaera pallida ATCC 43644 10157123 YP_004180095.1 CDS Isop_2981 NC_014962.1 4345516 4346439 R COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307: IPR011418; KEGG: rba:RB5053 hypothetical protein; PFAM: Xylose isomerase domain-containing protein TIM barrel; AP endonuclease 2 domain protein; SPTR: Putative uncharacterized protein; PFAM: AP endonuclease family 2 C terminus; Xylose isomerase-like TIM barrel; xylose isomerase domain-containing protein complement(4345516..4346439) Isosphaera pallida ATCC 43644 10157124 YP_004180096.1 CDS Isop_2982 NC_014962.1 4346568 4348091 R COGs: COG1232 Protoporphyrinogen oxidase; InterPro IPR002937; KEGG: cyb:CYB_2788 hypothetical protein; PFAM: amine oxidase; SPTR: Amine oxidase; manually curated; PFAM: Flavin containing amine oxidoreductase; UDP-galactopyranose mutase complement(4346568..4348091) Isosphaera pallida ATCC 43644 10157125 YP_004180097.1 CDS Isop_2983 NC_014962.1 4348376 4349053 R KEGG: bra:BRADO6626 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Copper resistance protein D; hypothetical protein complement(4348376..4349053) Isosphaera pallida ATCC 43644 10157126 YP_004180098.1 CDS Isop_2984 NC_014962.1 4349224 4349991 R COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002347: IPR002198; KEGG: psl:Psta_4323 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(4349224..4349991) Isosphaera pallida ATCC 43644 10157127 YP_004180099.1 CDS Isop_2985 NC_014962.1 4350637 4351131 D COGs: COG0666 FOG: Ankyrin repeat; InterPro IPR002110: IPR020683; KEGG: sin:YN1551_2013 ankyrin; PFAM: Ankyrin; SPTR: Ankyrin; PFAM: Ankyrin repeat; ankyrin 4350637..4351131 Isosphaera pallida ATCC 43644 10157128 YP_004180100.1 CDS Isop_2986 NC_014962.1 4351273 4352400 D KEGG: ote:Oter_0060 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4351273..4352400 Isosphaera pallida ATCC 43644 10157129 YP_004180101.1 CDS Isop_2987 NC_014962.1 4352452 4353996 R KEGG: psl:Psta_3111 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4352452..4353996) Isosphaera pallida ATCC 43644 10157130 YP_004180102.1 CDS Isop_2988 NC_014962.1 4354266 4355447 D KEGG: mpo:Mpop_5233 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4354266..4355447 Isosphaera pallida ATCC 43644 10157131 YP_004180103.1 CDS Isop_2989 NC_014962.1 4355732 4357849 D KEGG: hha:Hhal_1736 putative ABC transporter; SPTR: Putative ABC transporter; hypothetical protein 4355732..4357849 Isosphaera pallida ATCC 43644 10157132 YP_004180104.1 CDS Isop_2990 NC_014962.1 4357998 4360043 D InterPro IPR002917; KEGG: krh:KRH_10290 hypothetical protein; PFAM: GTP-binding protein HSR1-related; SPTR: Putative uncharacterized protein; GTP-binding protein HSR1-like protein 4357998..4360043 Isosphaera pallida ATCC 43644 10157133 YP_004180105.1 CDS Isop_2991 NC_014962.1 4360381 4361925 D KEGG: uma:UM06288.1 hypothetical protein; SPTR: High molecular mass nuclear antigen; hypothetical protein 4360381..4361925 Isosphaera pallida ATCC 43644 10157134 YP_004180106.1 CDS Isop_2992 NC_014962.1 4362360 4364348 D COGs: COG2812 DNA polymerase III gamma/tau subunits; InterPro IPR003593: IPR003959: IPR012763; KEGG: psl:Psta_2525 DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; SPTR: DNA polymerase III, subunits gamma and tau; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III, subunit gamma and tau; DNA polymerase III subunits gamma and tau 4362360..4364348 Isosphaera pallida ATCC 43644 10157136 YP_004180107.1 CDS Isop_2993 NC_014962.1 4364444 4364794 D COGs: COG0718 conserved hypothetical protein; InterPro IPR004401; KEGG: sat:SYN_00162 hypothetical protein; PFAM: Uncharacterised protein family UPF0133; SPTR: UPF0133 protein ACA_0728; PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: DNA-binding protein, YbaB/EbfC family; hypothetical protein 4364444..4364794 Isosphaera pallida ATCC 43644 10157137 YP_004180108.1 CDS Isop_2994 NC_014962.1 4365030 4365641 D COGs: COG0353 Recombinational DNA repair protein (RecF pathway); InterPro IPR006154: IPR000093: IPR015967: IPR006171; KEGG: rba:RB6492 recombinant protein RecR; PFAM: Zinc finger C4-type, RecR; TOPRIM domain-containing protein; SMART: Toprim sub domain-containing protein; SPTR: Recombinant protein RecR; TIGRFAM: recombination protein RecR; PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR; DNA replication and repair protein RecR 4365030..4365641 Isosphaera pallida ATCC 43644 10157138 YP_004180109.1 CDS Isop_2995 NC_014962.1 4365759 4367255 D COGs: COG1508 DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog; InterPro IPR000394: IPR007046: IPR007634; KEGG: psl:Psta_2523 RNA polymerase, sigma 54 subunit, RpoN; PFAM: sigma-54 DNA-binding domain protein; sigma-54 factor core-binding region; sigma-54 factor; SPTR: RNA polymerase, sigma 54 subunit, RpoN; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54 factor, core binding domain; Sigma-54, DNA binding domain; TIGRFAM: RNA polymerase sigma-54 factor; RNA polymerase sigma 54 subunit RpoN 4365759..4367255 Isosphaera pallida ATCC 43644 10157139 YP_004180110.1 CDS Isop_2996 NC_014962.1 4367445 4367990 R COGs: COG0335 Ribosomal protein L19; InterPro IPR001857: IPR018257; KEGG: psl:Psta_2263 ribosomal protein L19; PFAM: ribosomal protein L19; SPTR: 50S ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type; 50S ribosomal protein L19 complement(4367445..4367990) Isosphaera pallida ATCC 43644 10157140 YP_004180111.1 CDS Isop_2997 NC_014962.1 4368176 4368940 R COGs: COG0336 tRNA-(guanine-N1)-methyltransferase; InterPro IPR002649: IPR016009; KEGG: psl:Psta_2262 tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; PRIAM: tRNA (guanine-N(1)-)-methyltransferase; SPTR: tRNA (guanine-N(1)-)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; manually curated; PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; tRNA (Guanine37-N(1)-) methyltransferase complement(4368176..4368940) Isosphaera pallida ATCC 43644 10157141 YP_004180112.1 CDS Isop_2998 NC_014962.1 4369198 4369584 R COGs: COG0228 Ribosomal protein S16; InterPro IPR000307; KEGG: rba:RB12824 30S ribosomal protein S16; PFAM: ribosomal protein S16; SPTR: 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; 30S ribosomal protein S16 complement(4369198..4369584) Isosphaera pallida ATCC 43644 10157142 YP_004180113.1 CDS Isop_2999 NC_014962.1 4370224 4371606 D COGs: COG0213 Thymidine phosphorylase; InterProIPR017872: IPR017459: IPR000312: IPR013102: IPR 000053: IPR018090; KEGG: ank:AnaeK_0651 pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; Pyrimidine nucleoside phosphorylase domain; PRIAM: Thymidine phosphorylase; SPTR: Pyrimidine-nucleoside phosphorylase; TIGRFAM: pyrimidine-nucleoside phosphorylase; PFAM: Pyrimidine nucleoside phosphorylase C-terminal domain; Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: pyrimidine-nucleoside phosphorylase; thymidine phosphorylase 4370224..4371606 Isosphaera pallida ATCC 43644 10157143 YP_004180114.1 CDS Isop_3000 NC_014962.1 4372066 4373004 D COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107; KEGG: llo:LLO_1401 hypothetical protein, SPFH domain/band 7 family; PFAM: band 7 protein; SMART: band 7 protein; SPTR: Putative uncharacterized protein; PFAM: SPFH domain / Band 7 family; hypothetical protein 4372066..4373004 Isosphaera pallida ATCC 43644 10157144 YP_004180115.1 CDS Isop_3001 NC_014962.1 4373711 4375039 D COGs: COG4974 Site-specific recombinase XerD; InterPro IPR004107: IPR002104; KEGG: plm:Plim_2346 tyrosine recombinase XerC; PFAM: integrase family protein; integrase domain protein SAM domain protein; SPTR: Tyrosine recombinase XerC; PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; integrase family protein 4373711..4375039 Isosphaera pallida ATCC 43644 10157146 YP_004180116.1 CDS Isop_3002 NC_014962.1 4375363 4376949 D COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR002078: IPR001789: IPR020441: IPR003593: IPR 002197; KEGG: plm:Plim_1915 sigma-54 factor interaction domain-containing protein; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: AAA ATPase; SPTR: Acetoacetate metabolism regulatory protein ATOC; PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; Fis family two component sigma54 specific transcriptional regulator 4375363..4376949 Isosphaera pallida ATCC 43644 10157147 YP_004180117.1 CDS Isop_3003 NC_014962.1 4377061 4379823 R COGs: COG0612 Zn-dependent peptidase; InterPro IPR001431: IPR011765: IPR007863; KEGG: rmr:Rmar_0089 peptidase M16 domain protein; PFAM: peptidase M16 domain protein; SPTR: Peptidase M16 domain protein; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); peptidase M16 domain-containing protein complement(4377061..4379823) Isosphaera pallida ATCC 43644 10157148 YP_004180118.1 CDS Isop_3004 NC_014962.1 4380308 4381468 D COGs: COG0631 Serine/threonine protein phosphatase; InterPro IPR001932: IPR014045: IPR010822; KEGG: psl:Psta_1567 protein serine/threonine phosphatase; PFAM: Protein phosphatase 2C-like; Stage II sporulation protein E; SMART: protein phosphatase 2C domain protein; SPTR: Protein serine/threonine phosphatase; PFAM: Protein phosphatase 2C; protein serine/threonine phosphatase 4380308..4381468 Isosphaera pallida ATCC 43644 10157149 YP_004180119.1 CDS Isop_3005 NC_014962.1 4381597 4382112 D COGs: COG0314 Molybdopterin converting factor large subunit; InterPro IPR003448; KEGG: plm:Plim_0864 molybdopterin biosynthesis MoaE protein; PFAM: molybdopterin biosynthesis MoaE protein; SPTR: Molybdopterin converting factor (Subunit 2); PFAM: MoaE protein; molybdopterin synthase subunit MoaE 4381597..4382112 Isosphaera pallida ATCC 43644 10157150 YP_004180120.1 CDS Isop_3006 NC_014962.1 4382109 4383134 D COGs: COG2896 Molybdenum cofactor biosynthesis protein; InterProIPR001995: IPR006638: IPR000385: IPR007197: IPR 010505: IPR013483; KEGG: sus:Acid_6425 GTP cyclohydrolase subunit MoaA; PFAM: molybdenum cofactor synthesis domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: GTP cyclohydrolase subunit MoaA; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial; GTP cyclohydrolase subunit MoaA 4382109..4383134 Isosphaera pallida ATCC 43644 10157151 YP_004180121.1 CDS Isop_3007 NC_014962.1 4383912 4384502 D InterPro IPR005829: IPR005358; KEGG: rba:RB3283 hypothetical protein; PFAM: protein of unknown function UPF0153; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0153); hypothetical protein 4383912..4384502 Isosphaera pallida ATCC 43644 10157152 YP_004180122.1 CDS Isop_3008 NC_014962.1 4384499 4385092 D KEGG: mxa:MXAN_5569 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4384499..4385092 Isosphaera pallida ATCC 43644 10157153 YP_004180123.1 CDS Isop_3009 NC_014962.1 4385230 4385610 D COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119; KEGG: plm:Plim_1271 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; SPTR: Probable DNA-binding protein HU; PFAM: Bacterial DNA-binding protein; histone family protein DNA-binding protein 4385230..4385610 Isosphaera pallida ATCC 43644 10157154 YP_004180124.1 CDS Isop_3010 NC_014962.1 4385916 4386149 D KEGG: rba:RB3280 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4385916..4386149 Isosphaera pallida ATCC 43644 10157155 YP_004180125.1 CDS Isop_3011 NC_014962.1 4386454 4387302 D KEGG: min:Minf_0410 ABC-type transport system involved in gliding motility, permease component; SPTR: ABC-type transport system involved in multi-copper enzyme maturation, permease component; ABC-type transport system involved in gliding motility, permease 4386454..4387302 Isosphaera pallida ATCC 43644 10157156 YP_004180126.1 CDS Isop_3012 NC_014962.1 4387423 4389303 D InterPro IPR019196; KEGG: cya:CYA_2880 hypothetical protein; PFAM: ABC-type uncharacterised transport system; SPTR: Putative uncharacterized protein; PFAM: ABC-type uncharacterized transport system; ABC transporter 4387423..4389303 Isosphaera pallida ATCC 43644 10157157 YP_004180127.1 CDS Isop_3013 NC_014962.1 4389388 4391865 D KEGG: cya:CYA_2879 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4389388..4391865 Isosphaera pallida ATCC 43644 10157158 YP_004180128.1 CDS Isop_3014 NC_014962.1 4392090 4392635 D COGs: COG0221 Inorganic pyrophosphatase; InterPro IPR008162; KEGG: aba:Acid345_3968 inorganic diphosphatase; PFAM: Inorganic pyrophosphatase; PRIAM: Inorganic diphosphatase; SPTR: Inorganic diphosphatase; PFAM: Inorganic pyrophosphatase; inorganic diphosphatase 4392090..4392635 Isosphaera pallida ATCC 43644 10157159 YP_004180129.1 CDS Isop_3015 NC_014962.1 4392632 4393588 D COGs: COG1091 dTDP-4-dehydrorhamnose reductase; InterPro IPR005913; KEGG: bfo:BRAFLDRAFT_68401 hypothetical protein; PFAM: dTDP-4-dehydrorhamnose reductase; SPTR: dTDP-4-dehydrorhamnose reductase; PFAM: RmlD substrate binding domain; TIGRFAM: dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 4392632..4393588 Isosphaera pallida ATCC 43644 10157160 YP_004180130.1 CDS Isop_3016 NC_014962.1 4393629 4394405 D KEGG: pen:PSEEN2142 multidrug efflux protein MATE family; SPTR: Putative multidrug efflux protein, MatE family; hypothetical protein 4393629..4394405 Isosphaera pallida ATCC 43644 10157161 YP_004180131.1 CDS Isop_3017 NC_014962.1 4394616 4396010 D COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: gau:GAU_1147 secretion protein HlyD family protein; PFAM: secretion protein HlyD family protein; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter MFP subunit 4394616..4396010 Isosphaera pallida ATCC 43644 10157162 YP_004180132.1 CDS Isop_3018 NC_014962.1 4396087 4396911 D COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: sth:STH976 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter ATP-binding protein; PFAM: ABC transporter; ABC transporter-like protein 4396087..4396911 Isosphaera pallida ATCC 43644 10157163 YP_004180133.1 CDS Isop_3019 NC_014962.1 4396960 4398186 D COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: cts:Ctha_0502 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative ABC transporter, permease protein; PFAM: Predicted permease; hypothetical protein 4396960..4398186 Isosphaera pallida ATCC 43644 10157164 YP_004180134.1 CDS Isop_3020 NC_014962.1 4398743 4399990 D KEGG: psl:Psta_0043 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4398743..4399990 Isosphaera pallida ATCC 43644 10157166 YP_004180135.1 CDS Isop_3021 NC_014962.1 4400015 4406410 R KEGG: sna:Snas_4818 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4400015..4406410) Isosphaera pallida ATCC 43644 10157167 YP_004180136.1 CDS Isop_3022 NC_014962.1 4406792 4407487 R InterPro IPR000983: IPR001120: IPR012902; KEGG: rba:RB11016 signal peptide; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein complement(4406792..4407487) Isosphaera pallida ATCC 43644 10157168 YP_004180137.1 CDS Isop_3023 NC_014962.1 4407640 4412037 R KEGG: npu:Npun_R2919 hemolysin-type calcium-binding region; SPTR: Beta-lactamase, putative; TIGRFAM: actinobacterial surface-anchored protein domain; hypothetical protein complement(4407640..4412037) Isosphaera pallida ATCC 43644 10157169 YP_004180138.1 CDS Isop_3024 NC_014962.1 4412258 4415272 R KEGG: kfl:Kfla_2008 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: actinobacterial surface-anchored protein domain; hypothetical protein complement(4412258..4415272) Isosphaera pallida ATCC 43644 10157170 YP_004180139.1 CDS Isop_3025 NC_014962.1 4415950 4416336 R InterPro IPR006442; KEGG: bxe:Bxe_A2974 signal peptide protein; SPTR: Putative signal peptide protein, TPR domain-containing; TIGRFAM: prevent-host-death family protein; PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein; prevent-host-death family protein complement(4415950..4416336) Isosphaera pallida ATCC 43644 10157172 YP_004180140.1 CDS Isop_3026 NC_014962.1 4417245 4418342 D InterPro IPR000897: IPR012902; KEGG: plm:Plim_3726 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 4417245..4418342 Isosphaera pallida ATCC 43644 10157174 YP_004180141.1 CDS Isop_3027 NC_014962.1 4418415 4418873 D KEGG: plm:Plim_3704 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4418415..4418873 Isosphaera pallida ATCC 43644 10157175 YP_004180142.1 CDS Isop_3028 NC_014962.1 4418949 4419206 D KEGG: zma:100285219 xylogen protein 1; SPTR: Non-specific lipid-transfer protein; hypothetical protein 4418949..4419206 Isosphaera pallida ATCC 43644 10157176 YP_004180143.1 CDS Isop_3029 NC_014962.1 4419232 4420224 D KEGG: ahe:Arch_0199 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4419232..4420224 Isosphaera pallida ATCC 43644 10157177 YP_004180144.1 CDS Isop_3030 NC_014962.1 4420519 4421295 D COGs: COG0496 acid phosphatase; InterPro IPR002828; KEGG: cyt:cce_2598 stationary phase survival protein SurE; PFAM: Survival protein SurE; SPTR: Stationary-phase survival protein; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE; stationary-phase survival protein SurE 4420519..4421295 Isosphaera pallida ATCC 43644 10157178 YP_004180145.1 CDS Isop_3031 NC_014962.1 4421404 4422054 D COGs: COG0545 FKBP-type peptidyl-prolyl cis-trans isomerase 1; InterPro IPR001179; KEGG: npu:Npun_R2832 peptidylprolyl isomerase, FKBP-type; PFAM: peptidylprolyl isomerase FKBP-type; SPTR: Peptidyl-prolyl cis-trans isomerase; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; FKBP-type peptidylprolyl isomerase 4421404..4422054 Isosphaera pallida ATCC 43644 10157179 YP_004180146.1 CDS Isop_3032 NC_014962.1 4422233 4423432 D KEGG: npu:Npun_R2871 hypothetical protein; SPTR: Phosphoribosylaminoimidazole synthetase; hypothetical protein 4422233..4423432 Isosphaera pallida ATCC 43644 10157180 YP_004180147.1 CDS Isop_3033 NC_014962.1 4423572 4426472 D InterPro IPR017937: IPR017936: IPR013740; KEGG: rru:Rru_A0398 thiol-disulfide isomerase and thioredoxins-like; PFAM: Redoxin domain protein; SPTR: Thiol-disulfide isomerase and thioredoxins-like; PFAM: Redoxin; redoxin domain-containing protein 4423572..4426472 Isosphaera pallida ATCC 43644 10157181 YP_004180148.1 CDS Isop_3034 NC_014962.1 4426771 4427634 D COGs: COG2928 conserved hypothetical protein; InterPro IPR007462; KEGG: xfa:XF0199 hypothetical protein; PFAM: protein of unknown function DUF502; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF502); hypothetical protein 4426771..4427634 Isosphaera pallida ATCC 43644 10157182 YP_004180149.1 CDS Isop_3035 NC_014962.1 4427961 4430084 D COGs: COG0358 DNA primase; InterProIPR006295: IPR002694: IPR006154: IPR013264: IPR 006171; KEGG: psl:Psta_2694 DNA primase; PFAM: DNA primase catalytic core domain; TOPRIM domain-containing protein; SMART: Toprim sub domain-containing protein; SPTR: DNA primase; TIGRFAM: DNA primase; PFAM: Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; TIGRFAM: DNA primase, catalytic core; DNA primase 4427961..4430084 Isosphaera pallida ATCC 43644 10157183 YP_004180150.1 CDS Isop_3036 NC_014962.1 4430106 4431884 D COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR000943: IPR014284: IPR012760: IPR007127: IPR 009042: IPR007627: IPR007624: IPR007630; KEGG: plm:Plim_0214 RNA polymerase sigma factor RpoD; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 1.1 domain protein; sigma-70 region 4 domain protein; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 factor, region 1.1; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain; RNA polymerase sigma-70 subunit RpoD 4430106..4431884 Isosphaera pallida ATCC 43644 10157184 YP_004180151.1 CDS Isop_3037 NC_014962.1 4432017 4432844 D COGs: COG1579 Zn-ribbon protein possibly nucleic acid-binding; InterPro IPR003743; KEGG: plm:Plim_0030 protein of unknown function DUF164; PFAM: protein of unknown function DUF164; SPTR: Putative uncharacterized protein; PFAM: Putative zinc ribbon domain; hypothetical protein 4432017..4432844 Isosphaera pallida ATCC 43644 10157185 YP_004180152.1 CDS Isop_3038 NC_014962.1 4433556 4435457 D COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; InterPro IPR018480: IPR018481; KEGG: tmt:Tmath_0189 glycosyl transferase, family 4, conserved region; PFAM: Glycosyl transferase, family 4, conserved region; SPTR: UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; PFAM: Glycosyl transferase family 4; family 4 glycosyl transferase 4433556..4435457 Isosphaera pallida ATCC 43644 10157186 YP_004180153.1 CDS Isop_3039 NC_014962.1 4435719 4438199 D COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR005702: IPR003856; KEGG: rmr:Rmar_1126 capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein; PRIAM: Non-specific protein-tyrosine kinase; SPTR: Capsular exopolysaccharide family; TIGRFAM: capsular exopolysaccharide family; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; capsular exopolysaccharide family protein 4435719..4438199 Isosphaera pallida ATCC 43644 10157187 YP_004180154.1 CDS Isop_3040 NC_014962.1 4438266 4439987 D KEGG: mxa:MXAN_1052 O-antigen polymerase family protein; SPTR: O-antigen polymerase family protein; hypothetical protein 4438266..4439987 Isosphaera pallida ATCC 43644 10157188 YP_004180155.1 CDS Isop_3041 NC_014962.1 4440201 4443551 D KEGG: dan:Dana_GF24314 GF24314 gene product from transcript GF24314-RA; SPTR: Minus agglutinin; hypothetical protein 4440201..4443551 Isosphaera pallida ATCC 43644 10157189 YP_004180156.1 CDS Isop_3042 NC_014962.1 4443715 4444923 D InterPro IPR013426: IPR019127; KEGG: dvl:Dvul_3054 eight transmembrane protein EpsH; PFAM: Exosortase EpsH-related; SPTR: Eight transmembrane protein EpsH; TIGRFAM: eight transmembrane protein EpsH; PFAM: Transmembrane exosortase (Exosortase_EpsH); TIGRFAM: eight transmembrane protein EpsH (proposed exosortase); transmembrane protein EpsH 4443715..4444923 Isosphaera pallida ATCC 43644 10157190 YP_004180157.1 CDS Isop_3043 NC_014962.1 4444920 4445705 D InterPro IPR014263; KEGG: dba:Dbac_2581 EpsI family protein; SPTR: EpsI family protein; TIGRFAM: EpsI family protein; PFAM: Protein of unknown function (DUF3485); TIGRFAM: EpsI family protein; EpsI family protein 4444920..4445705 Isosphaera pallida ATCC 43644 10157191 YP_004180158.1 CDS Isop_3044 NC_014962.1 4445795 4446823 D COGs: COG1089 GDP-D-mannose dehydratase; InterPro IPR006368: IPR001509; KEGG: ath:AT3G51160 MUR1 (MURUS 1); GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: GDP-mannose 4,6-dehydratase; TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: GDP-mannose 4,6-dehydratase; GDP-mannose 4,6-dehydratase 4445795..4446823 Isosphaera pallida ATCC 43644 10157192 YP_004180159.1 CDS Isop_3045 NC_014962.1 4446929 4447516 D KEGG: dsh:Dshi_1950 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4446929..4447516 Isosphaera pallida ATCC 43644 10157193 YP_004180160.1 CDS Isop_3046 NC_014962.1 4447683 4447850 D InterPro IPR000390; KEGG: dsa:Desal_0931 small multidrug resistance protein; PFAM: small multidrug resistance protein; SPTR: Small multidrug resistance protein; PFAM: Small Multidrug Resistance protein; small multidrug resistance protein 4447683..4447850 Isosphaera pallida ATCC 43644 10157194 YP_004180161.1 CDS Isop_3047 NC_014962.1 4447854 4448000 D InterPro IPR000390; KEGG: dsa:Desal_0931 small multidrug resistance protein; PFAM: small multidrug resistance protein; SPTR: Small multidrug resistance protein; PFAM: Small Multidrug Resistance protein; small multidrug resistance protein 4447854..4448000 Isosphaera pallida ATCC 43644 10157195 YP_004180162.1 CDS Isop_3048 NC_014962.1 4448241 4449929 D KEGG: olu:OSTLU_24368 predicted protein; SPTR: Predicted protein; hypothetical protein 4448241..4449929 Isosphaera pallida ATCC 43644 10157196 YP_004180163.1 CDS Isop_3049 NC_014962.1 4450070 4451548 D COGs: COG2271 Sugar phosphate permease; InterPro IPR011701; KEGG: gem:GM21_2012 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily; major facilitator superfamily protein 4450070..4451548 Isosphaera pallida ATCC 43644 10157197 YP_004180164.1 CDS Isop_3050 NC_014962.1 4451788 4452789 D COGs: COG0039 Malate/lactate dehydrogenase; InterPro IPR001252: IPR010945: IPR001557: IPR001236; KEGG: plm:Plim_1133 malate dehydrogenase; PFAM: Lactate/malate dehydrogenase; SPTR: Malate dehydrogenase; TIGRFAM: malate dehydrogenase; PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: malate dehydrogenase; malate dehydrogenase (NAD) 4451788..4452789 Isosphaera pallida ATCC 43644 10157198 YP_004180165.1 CDS Isop_3051 NC_014962.1 4452944 4453957 D COGs: COG0618 Exopolyphosphatase-related protein; InterPro IPR001667: IPR003156; KEGG: plm:Plim_0422 phosphoesterase RecJ domain protein; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; SPTR: Phosphoesterase RecJ domain protein; PFAM: DHHA1 domain; DHH family; phosphoesterase RecJ domain-containing protein 4452944..4453957 Isosphaera pallida ATCC 43644 10157199 YP_004180166.1 CDS Isop_3052 NC_014962.1 4454107 4454625 D COGs: COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog); InterPro IPR004307; KEGG: sti:Sthe_0774 TspO and MBR like protein; PFAM: TspO/MBR family protein; SPTR: TspO and MBR like protein; PFAM: TspO/MBR family; TspO and MBR-like protein 4454107..4454625 Isosphaera pallida ATCC 43644 10157200 YP_004180167.1 CDS Isop_3053 NC_014962.1 4454705 4455685 R InterPro IPR012902; KEGG: plm:Plim_1767 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein complement(4454705..4455685) Isosphaera pallida ATCC 43644 10157201 YP_004180168.1 CDS Isop_3054 NC_014962.1 4455980 4457587 D KEGG: rrs:RoseRS_2659 glycosyl transferase family protein; SPTR: Membrane protein, putative; hypothetical protein 4455980..4457587 Isosphaera pallida ATCC 43644 10157202 YP_004180169.1 CDS Isop_3055 NC_014962.1 4457584 4458723 D COGs: COG1907 sugar kinase; InterPro IPR004422; KEGG: xau:Xaut_3535 beta-ribofuranosylaminobenzene 5'-phosphate synthase; SPTR: Beta-ribofuranosylaminobenzene 5'-phosphate synthase family; TIGRFAM: beta-ribofuranosylaminobenzene 5'-phosphate synthase family; PFAM: GHMP kinases C terminal; TIGRFAM: beta-RFAP synthase; beta-ribofuranosylaminobenzene 5'-phosphate synthase 4457584..4458723 Isosphaera pallida ATCC 43644 10157203 YP_004180170.1 CDS Isop_3056 NC_014962.1 4458796 4460238 R KEGG: pca:Pcar_1313 hypothetical protein; SPTR: TPR repeat-containing protein; hypothetical protein complement(4458796..4460238) Isosphaera pallida ATCC 43644 10157204 YP_004180171.1 CDS Isop_3057 NC_014962.1 4460528 4461268 R KEGG: mca:MCA0776 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4460528..4461268) Isosphaera pallida ATCC 43644 10157205 YP_004180172.1 CDS Isop_3058 NC_014962.1 4461265 4461957 R COGs: COG0242 N-formylmethionyl-tRNA deformylase; InterPro IPR000181; KEGG: syx:SynWH7803_2339 peptide deformylase; PFAM: formylmethionine deformylase; PRIAM: Peptide deformylase; SPTR: Peptide deformylase; TIGRFAM: peptide deformylase; PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase; peptide deformylase complement(4461265..4461957) Isosphaera pallida ATCC 43644 10157206 YP_004180173.1 CDS Isop_3059 NC_014962.1 4462224 4463372 R COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR002471; KEGG: psl:Psta_0862 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2048); hypothetical protein complement(4462224..4463372) Isosphaera pallida ATCC 43644 10157207 YP_004180174.1 CDS Isop_3060 NC_014962.1 4463762 4464976 D COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR011908: IPR011910: IPR002201; KEGG: plm:Plim_1964 glycosyl transferase family 9; PFAM: glycosyl transferase family 9; SPTR: Heptosyltransferase family protein; TIGRFAM: lipopolysaccharide heptosyltransferase I; lipopolysaccharide heptosyltransferase II; PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase I; lipopolysaccharide heptosyltransferase II; lipopolysaccharide heptosyltransferase I 4463762..4464976 Isosphaera pallida ATCC 43644 10157208 YP_004180175.1 CDS Isop_3061 NC_014962.1 4465107 4465583 D KEGG: mmi:MMAR_4389 proline-rich antigen, Pra; SPTR: Proline-rich antigen, Pra; hypothetical protein 4465107..4465583 Isosphaera pallida ATCC 43644 10157209 YP_004180176.1 CDS Isop_3062 NC_014962.1 4465914 4466486 D KEGG: cqu:CpipJ_CPIJ009407 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4465914..4466486 Isosphaera pallida ATCC 43644 10157210 YP_004180177.1 CDS Isop_3063 NC_014962.1 4466562 4469756 D InterPro IPR011031; KEGG: rba:RB11084 response regulator aspartate phosphatase RapC; SPTR: Putative uncharacterized protein; response regulator aspartate phosphatase RapC 4466562..4469756 Isosphaera pallida ATCC 43644 10157211 YP_004180178.1 CDS Isop_3064 NC_014962.1 4469753 4471642 D InterPro IPR013517: IPR011519; KEGG: rba:RB11088 hypothetical protein; PFAM: ASPIC/UnbV domain protein; FG-GAP repeat protein; SPTR: Similar to ASPIC; PFAM: ASPIC and UnbV; FG-GAP repeat; ASPIC/UnbV domain-containing protein 4469753..4471642 Isosphaera pallida ATCC 43644 10157212 YP_004180179.1 CDS Isop_3065 NC_014962.1 4472003 4473454 R InterPro IPR006311: IPR017909: IPR019546: IPR010869; KEGG: dfe:Dfer_1039 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; Twin-arginine translocation pathway, signal sequence, subgroup; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501); TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; hypothetical protein complement(4472003..4473454) Isosphaera pallida ATCC 43644 10157213 YP_004180180.1 CDS Isop_3066 NC_014962.1 4473514 4475184 R InterPro IPR011444; KEGG: dfe:Dfer_1040 protein of unknown function DUF1549; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Protein of unknown function (DUF1553); hypothetical protein complement(4473514..4475184) Isosphaera pallida ATCC 43644 10157214 YP_004180181.1 CDS Isop_3067 NC_014962.1 4475560 4476345 R KEGG: aga:AgaP_AGAP005366 AGAP005366-PA; SPTR: AGAP005366-PA; hypothetical protein complement(4475560..4476345) Isosphaera pallida ATCC 43644 10157215 YP_004180182.1 CDS Isop_3068 NC_014962.1 4476347 4476856 D KEGG: tcr:506133.61 mucin-associated surface protein (MASP); SPTR: Mucin-associated surface protein (MASP), putative; hypothetical protein 4476347..4476856 Isosphaera pallida ATCC 43644 10157216 YP_004180183.1 CDS Isop_3069 NC_014962.1 4477100 4478665 R KEGG: rsq:Rsph17025_2248 elongation factor G; SPTR: Small GTP-binding protein; hypothetical protein complement(4477100..4478665) Isosphaera pallida ATCC 43644 10157217 YP_004180184.1 CDS Isop_3070 NC_014962.1 4478895 4479923 D InterPro IPR011465; KEGG: plm:Plim_3142 protein of unknown function DUF1571; PFAM: protein of unknown function DUF1571; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1571); hypothetical protein 4478895..4479923 Isosphaera pallida ATCC 43644 10157218 YP_004180185.1 CDS Isop_3071 NC_014962.1 4479989 4480624 R KEGG: mxa:MXAN_0053 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4479989..4480624) Isosphaera pallida ATCC 43644 10157219 YP_004180186.1 CDS Isop_3072 NC_014962.1 4481048 4481620 R COGs: COG2062 Phosphohistidine phosphatase SixA; InterPro IPR013078; KEGG: nde:NIDE2414 hypothetical protein; PFAM: Phosphoglycerate mutase; SPTR: Putative phosphohistidine phosphatase, SixA; PFAM: Phosphoglycerate mutase family; TIGRFAM: phosphohistidine phosphatase SixA; putative phosphohistidine phosphatase, SixA complement(4481048..4481620) Isosphaera pallida ATCC 43644 10157220 YP_004180187.1 CDS Isop_3073 NC_014962.1 4481617 4482522 R COGs: COG1834 N-Dimethylarginine dimethylaminohydrolase; InterPro IPR003198; KEGG: psl:Psta_3749 amidinotransferase; PFAM: amidinotransferase; SPTR: Amidinotransferase; PFAM: Amidinotransferase; amidinotransferase complement(4481617..4482522) Isosphaera pallida ATCC 43644 10157221 YP_004180188.1 CDS Isop_3074 NC_014962.1 4482993 4484129 D KEGG: plm:Plim_0886 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4482993..4484129 Isosphaera pallida ATCC 43644 10157222 YP_004180189.1 CDS Isop_3075 NC_014962.1 4484400 4487939 D InterPro IPR000253; KEGG: psl:Psta_2714 pyrrolo-quinoline quinone; PFAM: Forkhead-associated protein; SPTR: Putative uncharacterized protein; forkhead-associated protein 4484400..4487939 Isosphaera pallida ATCC 43644 10157223 YP_004180190.1 CDS Isop_3076 NC_014962.1 4488091 4490550 D COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: psl:Psta_2713 extracellular solute-binding protein family 5; PFAM: extracellular solute-binding protein family 5; SPTR: Putative uncharacterized protein; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; family 5 extracellular solute-binding protein 4488091..4490550 Isosphaera pallida ATCC 43644 10157224 YP_004180191.1 CDS Isop_3077 NC_014962.1 4490640 4492403 D KEGG: psl:Psta_2712 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4490640..4492403 Isosphaera pallida ATCC 43644 10157225 YP_004180192.1 CDS Isop_3078 NC_014962.1 4492610 4494025 D COGs: COG0017 Aspartyl/asparaginyl-tRNA synthetase; InterProIPR002312: IPR004522: IPR006195: IPR004365: IPR 004364; KEGG: xal:XALc_1738 probable asparaginyl-tRNA synthetase (AsnRS) protein; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; SPTR: Probable asparaginyl-trna synthetase (Asnrs) protein; TIGRFAM: asparaginyl-tRNA synthetase; PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: asparaginyl-tRNA synthetase; asparaginyl-tRNA synthetase 4492610..4494025 Isosphaera pallida ATCC 43644 10157226 YP_004180193.1 CDS Isop_3079 NC_014962.1 4494404 4495438 D KEGG: ank:AnaeK_2175 PBS lyase heat domain protein repeat-containing protein; SPTR: Peptidase S1 and S6, chymotrypsin/Hap; hypothetical protein 4494404..4495438 Isosphaera pallida ATCC 43644 10157227 YP_004180194.1 CDS Isop_3080 NC_014962.1 4495341 4496174 R COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR000943: IPR014284: IPR009042: IPR007627: IPR 007624: IPR007630; KEGG: psl:Psta_2413 RNA polymerase, sigma 70 subunit, RpoD subfamily; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 3 domain protein; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-38 subunit RpoS complement(4495341..4496174) Isosphaera pallida ATCC 43644 10157228 YP_004180195.1 CDS Isop_3081 NC_014962.1 4496869 4497432 R InterPro IPR017936: IPR000866; KEGG: nhl:Nhal_2971 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: AhpC/TSA family; alkyl hydroperoxide reductase complement(4496869..4497432) Isosphaera pallida ATCC 43644 10157229 YP_004180196.1 CDS Isop_3082 NC_014962.1 4497644 4502881 R COGs: COG2319 FOG: WD40 repeat; InterPro IPR001680: IPR019782: IPR017986: IPR019781; KEGG: hoh:Hoch_3099 serine/threonine protein kinase with WD40 repeats; PFAM: WD40 repeat, subgroup; SMART: WD-40 repeat-containing protein; SPTR: Serine/threonine protein kinase with WD40 repeats; PFAM: WD domain, G-beta repeat; WD40 repeat-containing protein complement(4497644..4502881) Isosphaera pallida ATCC 43644 10157230 YP_004180197.1 CDS Isop_3083 NC_014962.1 4503422 4506175 D InterPro IPR009056: IPR011444; KEGG: rba:RB12567 hypothetical protein; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Planctomycete cytochrome C; Protein of unknown function (DUF1553); hypothetical protein 4503422..4506175 Isosphaera pallida ATCC 43644 10157231 YP_004180198.1 CDS Isop_3084 NC_014962.1 4506262 4507764 D InterPro IPR006311: IPR017909: IPR010869; KEGG: rba:RB12566 sulfatase; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501); TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; hypothetical protein 4506262..4507764 Isosphaera pallida ATCC 43644 10157232 YP_004180199.1 CDS Isop_3085 NC_014962.1 4507761 4508207 D KEGG: tfu:Tfu_2074 tyrosine protein kinase:serine/threonine protein kinase; SPTR: Tyrosine protein kinase:Serine/threonine protein kinase; hypothetical protein 4507761..4508207 Isosphaera pallida ATCC 43644 10157233 YP_004180200.1 CDS Isop_3086 NC_014962.1 4508248 4508463 D KEGG: gox:GOX1607 lipopolysaccharide N-acetylglucosaminyltransferase II; SPTR: Lipopolysaccharide N-acetylglucosaminyltransferase II; hypothetical protein 4508248..4508463 Isosphaera pallida ATCC 43644 10157234 YP_004180201.1 CDS Isop_3087 NC_014962.1 4508552 4509823 R COGs: COG0515 Serine/threonine protein kinase; InterProIPR017441: IPR008271: IPR020635: IPR002290: IPR 000719: IPR017442; KEGG: psl:Psta_4397 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain; serine/threonine protein kinase complement(4508552..4509823) Isosphaera pallida ATCC 43644 10157235 YP_004180202.1 CDS Isop_3088 NC_014962.1 4510127 4510837 R COGs: COG4099 peptidase; InterPro IPR003140; KEGG: rba:RB9546 putative a hydrolase; PFAM: phospholipase/Carboxylesterase; SPTR: Putative uncharacterized protein; PFAM: Dienelactone hydrolase family; phospholipase/carboxylesterase complement(4510127..4510837) Isosphaera pallida ATCC 43644 10157236 YP_004180203.1 CDS Isop_3089 NC_014962.1 4511452 4511847 D InterPro IPR008207; KEGG: hla:Hlac_0527 chromosome segregation protein SMC; SPTR: Chromosome segregation protein SMC; PFAM: Hpt domain; hypothetical protein 4511452..4511847 Isosphaera pallida ATCC 43644 10157237 YP_004180204.1 CDS Isop_3090 NC_014962.1 4511885 4512931 R COGs: COG0167 Dihydroorotate dehydrogenase; InterPro IPR001295: IPR005720: IPR012135; KEGG: rba:RB8748 dihydroorotate dehydrogenase; PFAM: dihydroorotate oxidase; PRIAM: Dihydroorotate oxidase; SPTR: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase (subfamily 1) family protein; dihydroorotate oxidase B, catalytic subunit complement(4511885..4512931) Isosphaera pallida ATCC 43644 10157238 YP_004180205.1 CDS Isop_3091 NC_014962.1 4512939 4513730 R COGs: COG2935 Putative arginyl-tRNA:protein arginylyltransferase; InterPro IPR017138: IPR007471: IPR007472; KEGG: mxa:MXAN_2360 arginyl-tRNA-protein transferase; PFAM: Arginine-tRNA-protein transferase domain protein; SPTR: Arginine-transferase family protein; PFAM: Arginine-tRNA-protein transferase, C terminus; Arginine-tRNA-protein transferase, N terminus; arginine-tRNA-protein transferase domain-containing protein complement(4512939..4513730) Isosphaera pallida ATCC 43644 10157239 YP_004180206.1 CDS Isop_3092 NC_014962.1 4513785 4516277 R KEGG: psl:Psta_4662 O-antigen polymerase; SPTR: Hemocyanin type 1-like protein; PFAM: O-Antigen ligase; hypothetical protein complement(4513785..4516277) Isosphaera pallida ATCC 43644 10157240 YP_004180207.1 CDS Isop_3093 NC_014962.1 4516255 4517412 R COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; InterPro IPR018481; KEGG: psl:Psta_4663 glycosyl transferase family 4; PFAM: Glycosyl transferase, family 4, conserved region; SPTR: Glycosyl transferase family 4; PFAM: Glycosyl transferase family 4; family 4 glycosyl transferase complement(4516255..4517412) Isosphaera pallida ATCC 43644 10157241 YP_004180208.1 CDS Isop_3094 NC_014962.1 4517542 4519329 R COGs: COG0442 Prolyl-tRNA synthetase; InterProIPR001986: IPR002316: IPR004500: IPR006195: IPR 002314: IPR007214: IPR004154; KEGG: plm:Plim_2498 prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; Anticodon-binding domain protein; SPTR: Prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: YbaK / prolyl-tRNA synthetases associated domain; Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family II; prolyl-tRNA synthetase complement(4517542..4519329) Isosphaera pallida ATCC 43644 10157242 YP_004180209.1 CDS Isop_3095 NC_014962.1 4519664 4520992 R COGs: COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains); InterPro IPR005882: IPR005835: IPR001451; KEGG: mta:Moth_0075 UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; PRIAM: Glucosamine-1-phosphate N-acetyltransferase; SPTR: Bifunctional protein glmU; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Nucleotidyl transferase; TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; UDP-N-acetylglucosamine pyrophosphorylase complement(4519664..4520992) Isosphaera pallida ATCC 43644 10157243 YP_004180210.1 CDS Isop_3096 NC_014962.1 4521122 4522246 R InterPro IPR000182; KEGG: psl:Psta_3252 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: Putative uncharacterized protein; PFAM: Acetyltransferase (GNAT) family; N-acetyltransferase GCN5 complement(4521122..4522246) Isosphaera pallida ATCC 43644 10157244 YP_004180211.1 CDS Isop_3097 NC_014962.1 4522518 4522832 R COGs: COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase; InterPro IPR017941; KEGG: psl:Psta_2904 Rieske (2Fe-2S) domain protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: Rieske (2Fe-2S) domain protein; PFAM: Rieske [2Fe-2S] domain; Rieske (2Fe-2S) domain-containing protein complement(4522518..4522832) Isosphaera pallida ATCC 43644 10157245 YP_004180212.1 CDS Isop_3098 NC_014962.1 4523183 4524736 D KEGG: swi:Swit_3100 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4523183..4524736 Isosphaera pallida ATCC 43644 10157246 YP_004180213.1 CDS Isop_3099 NC_014962.1 4524984 4526036 R COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: plm:Plim_0803 aldo/keto reductase; PFAM: aldo/keto reductase; SPTR: Aldo/keto reductase; PFAM: Aldo/keto reductase family; aldo/keto reductase complement(4524984..4526036) Isosphaera pallida ATCC 43644 10157247 YP_004180214.1 CDS Isop_3100 NC_014962.1 4526644 4526961 D InterPro IPR018313; KEGG: dan:Dana_GF15984 GF15984 gene product from transcript GF15984-RA; SPTR: GF15984; hypothetical protein 4526644..4526961 Isosphaera pallida ATCC 43644 10157248 YP_004180215.1 CDS Isop_3101 NC_014962.1 4526809 4527753 R COGs: COG0177 EndoIII-related endonuclease; InterProIPR004035: IPR004036: IPR005759: IPR003265: IPR 003651; KEGG: gau:GAU_0535 putative DNA glycosylase/AP lyase; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SMART: HhH-GPD family protein; iron-sulfur cluster loop; SPTR: Putative DNA glycosylase/AP lyase; TIGRFAM: endonuclease III; PFAM: HhH-GPD superfamily base excision DNA repair protein; Iron-sulfur binding domain of endonuclease III; Helix-hairpin-helix motif; TIGRFAM: endonuclease III; DNA-(apurinic or apyrimidinic site) lyase complement(4526809..4527753) Isosphaera pallida ATCC 43644 10157249 YP_004180216.1 CDS Isop_3102 NC_014962.1 4528164 4528844 D COGs: COG2802 Uncharacterized protein similar to the N-terminal domain of Lon protease; InterPro IPR003111; KEGG: psl:Psta_2708 peptidase S16 lon domain protein; PFAM: peptidase S16 lon domain protein; SMART: peptidase S16 lon domain protein; SPTR: Peptidase S16 lon domain protein; PFAM: ATP-dependent protease La (LON) domain; peptidase S16 lon domain-containing protein 4528164..4528844 Isosphaera pallida ATCC 43644 10157250 YP_004180217.1 CDS Isop_3103 NC_014962.1 4529185 4529787 D COGs: COG0302 GTP cyclohydrolase I; InterPro IPR018234: IPR001474: IPR020602; KEGG: psl:Psta_2339 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; PRIAM: GTP cyclohydrolase I; SPTR: GTP cyclohydrolase 1; TIGRFAM: GTP cyclohydrolase I; manually curated; PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I; GTP cyclohydrolase I 4529185..4529787 Isosphaera pallida ATCC 43644 10157251 YP_004180218.1 CDS Isop_3104 NC_014962.1 4529897 4533103 D COGs: COG0277 FAD/FMN-containing dehydrogenase; InterProIPR017900: IPR017896: IPR016166: IPR006094: IPR 001938: IPR004113; KEGG: psl:Psta_2342 D-lactate dehydrogenase (cytochrome); PFAM: FAD linked oxidase domain protein; Thaumatin pathogenesis-related protein; PRIAM: D-lactate dehydrogenase (cytochrome); SPTR: D-lactate dehydrogenase (Cytochrome); PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; D-lactate dehydrogenase 4529897..4533103 Isosphaera pallida ATCC 43644 10157252 YP_004180219.1 CDS Isop_3105 NC_014962.1 4533531 4534037 D InterPro IPR010916; KEGG: plm:Plim_3704 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4533531..4534037 Isosphaera pallida ATCC 43644 10157253 YP_004180220.1 CDS Isop_3106 NC_014962.1 4534167 4534316 D hypothetical protein 4534167..4534316 Isosphaera pallida ATCC 43644 10157254 YP_004180221.1 CDS Isop_3107 NC_014962.1 4534403 4535089 D KEGG: uma:UM04283.1 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4534403..4535089 Isosphaera pallida ATCC 43644 10157255 YP_004180222.1 CDS Isop_3108 NC_014962.1 4535500 4535901 D KEGG: edi:EDI_046920 GPI mannosyltransferase; SPTR: GPI mannosyltransferase, putative; hypothetical protein 4535500..4535901 Isosphaera pallida ATCC 43644 10157256 YP_004180223.1 CDS Isop_3109 NC_014962.1 4536010 4536927 D KEGG: rxy:Rxyl_0756 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4536010..4536927 Isosphaera pallida ATCC 43644 10157257 YP_004180224.1 CDS Isop_3110 NC_014962.1 4536939 4537880 D KEGG: plm:Plim_0161 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1559); hypothetical protein 4536939..4537880 Isosphaera pallida ATCC 43644 10157258 YP_004180225.1 CDS Isop_3111 NC_014962.1 4537844 4538095 R KEGG: mcc:719275 similar to piggyBac transposable element derived 5; SPTR: Putative lipoprotein; hypothetical protein complement(4537844..4538095) Isosphaera pallida ATCC 43644 10157259 YP_004180226.1 CDS Isop_3112 NC_014962.1 4538122 4539225 D COGs: COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis; InterPro IPR003374; KEGG: plm:Plim_3767 ApbE family lipoprotein; PFAM: ApbE family lipoprotein; SPTR: ApbE family lipoprotein; PFAM: ApbE family; ApbE family lipoprotein 4538122..4539225 Isosphaera pallida ATCC 43644 10157260 YP_004180227.1 CDS Isop_3113 NC_014962.1 4539313 4540434 D KEGG: psl:Psta_2482 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4539313..4540434 Isosphaera pallida ATCC 43644 10157261 YP_004180228.1 CDS Isop_3114 NC_014962.1 4540666 4542345 D COGs: COG0673 dehydrogenase and related protein; InterPro IPR006311: IPR017909: IPR019546: IPR000683; KEGG: plm:Plim_3765 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; Twin-arginine translocation pathway, signal sequence, subgroup; SPTR: Oxidoreductase domain protein; PFAM: TAT (twin-arginine translocation) pathway signal sequence; Oxidoreductase family, NAD-binding Rossmann fold; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; oxidoreductase domain-containing protein 4540666..4542345 Isosphaera pallida ATCC 43644 10157262 YP_004180229.1 CDS Isop_3115 NC_014962.1 4542529 4543311 D COGs: COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase; InterPro IPR013838: IPR001228; KEGG: psl:Psta_2581 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; SPTR: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 4542529..4543311 Isosphaera pallida ATCC 43644 10157263 YP_004180230.1 CDS Isop_3116 NC_014962.1 4543419 4544969 D InterPro IPR010869; KEGG: psl:Psta_2202 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501); hypothetical protein 4543419..4544969 Isosphaera pallida ATCC 43644 10157264 YP_004180231.1 CDS Isop_3117 NC_014962.1 4545500 4546165 D InterPro IPR013216; KEGG: scl:sce3690 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: Putative uncharacterized protein; PFAM: Methyltransferase domain; type 11 methyltransferase 4545500..4546165 Isosphaera pallida ATCC 43644 10157265 YP_004180232.1 CDS Isop_3118 NC_014962.1 4546229 4546426 R KEGG: fgr:FG02020.1 hypothetical protein; hypothetical protein complement(4546229..4546426) Isosphaera pallida ATCC 43644 10157266 YP_004180233.1 CDS Isop_3119 NC_014962.1 4546567 4547271 R COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: sti:Sthe_0853 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: Methyltransferase domain; type 11 methyltransferase complement(4546567..4547271) Isosphaera pallida ATCC 43644 10157267 YP_004180234.1 CDS Isop_3121 NC_014962.1 4548130 4549740 R KEGG: sus:Acid_7492 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4548130..4549740) Isosphaera pallida ATCC 43644 10157269 YP_004180235.1 CDS Isop_3122 NC_014962.1 4549737 4551005 R COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: mar:MAE_59470 glycosyl transferase; PFAM: glycosyl transferase family 2; SPTR: Probable glycosyl transferase; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase complement(4549737..4551005) Isosphaera pallida ATCC 43644 10157270 YP_004180236.1 CDS Isop_3123 NC_014962.1 4551329 4552240 R COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: afo:Afer_1817 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase complement(4551329..4552240) Isosphaera pallida ATCC 43644 10157271 YP_004180237.1 CDS Isop_3124 NC_014962.1 4552237 4553430 R COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: cyc:PCC7424_5786 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase complement(4552237..4553430) Isosphaera pallida ATCC 43644 10157272 YP_004180238.1 CDS Isop_3125 NC_014962.1 4553369 4554625 R COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase; InterPro IPR003331; KEGG: adg:Adeg_0074 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; PRIAM: UDP-N-acetylglucosamine 2-epimerase; SPTR: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase complement(4553369..4554625) Isosphaera pallida ATCC 43644 10157273 YP_004180239.1 CDS Isop_3126 NC_014962.1 4554622 4555998 R COGs: COG1134 ABC-type polysaccharide/polyol phosphate transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: cyh:Cyan8802_2759 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter; ABC transporter-like protein complement(4554622..4555998) Isosphaera pallida ATCC 43644 10157274 YP_004180240.1 CDS Isop_3127 NC_014962.1 4556188 4557075 R COGs: COG1682 ABC-type polysaccharide/polyol phosphate export systems permease component; InterPro IPR000412: IPR013525; KEGG: chl:Chy400_2271 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter; PFAM: ABC-2 type transporter; ABC-2 type transporter complement(4556188..4557075) Isosphaera pallida ATCC 43644 10157275 YP_004180241.1 CDS Isop_3128 NC_014962.1 4557072 4558382 R KEGG: plm:Plim_3885 O-antigen polymerase; SPTR: O-antigen polymerase; PFAM: O-Antigen ligase; O-antigen polymerase complement(4557072..4558382) Isosphaera pallida ATCC 43644 10157276 YP_004180242.1 CDS Isop_3129 NC_014962.1 4558534 4560972 R COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR005702: IPR003856; KEGG: rce:RC1_4006 succinoglycan biosynthesis transport protein ExoP; PFAM: lipopolysaccharide biosynthesis protein; SPTR: Putative uncharacterized protein; TIGRFAM: capsular exopolysaccharide family; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; capsular exopolysaccharide family protein complement(4558534..4560972) Isosphaera pallida ATCC 43644 10157277 YP_004180243.1 CDS Isop_3130 NC_014962.1 4561661 4566097 D InterPro IPR003644; KEGG: ter:Tery_1772 Na-Ca exchanger/integrin-beta4; PFAM: Na-Ca exchanger/integrin-beta4; SMART: Na-Ca exchanger/integrin-beta4; SPTR: Na-Ca exchanger/integrin-beta4; PFAM: Calx-beta domain; Na-Ca exchanger/integrin-beta4 4561661..4566097 Isosphaera pallida ATCC 43644 10157278 YP_004180244.1 CDS Isop_3131 NC_014962.1 4566350 4568458 R COGs: COG0653 Preprotein translocase subunit SecA (ATPase RNA helicase); InterProIPR020937: IPR011115: IPR000185: IPR014018: IPR 011130; KEGG: rba:RB2013 preprotein translocase subunit SecA; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; SPTR: SecA DEAD domain protein; PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; protein translocase subunit secA complement(4566350..4568458) Isosphaera pallida ATCC 43644 10157279 YP_004180245.1 CDS Isop_3132 NC_014962.1 4568778 4570172 R KEGG: phe:Phep_2880 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4568778..4570172) Isosphaera pallida ATCC 43644 10157280 YP_004180246.1 CDS Isop_3133 NC_014962.1 4570505 4571653 R InterPro IPR006311: IPR017909: IPR001258; KEGG: psl:Psta_2952 NHL repeat containing protein; PFAM: NHL repeat containing protein; SPTR: Twin-arginine translocation pathway signal; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; NHL repeat containing protein complement(4570505..4571653) Isosphaera pallida ATCC 43644 10157281 YP_004180247.1 CDS Isop_3134 NC_014962.1 4571979 4573010 D COGs: COG1715 Restriction endonuclease; InterPro IPR007560; KEGG: cef:CE3P012 putative restriction system protein; PFAM: restriction endonuclease; SPTR: Putative restriction system protein; PFAM: Restriction endonuclease; restriction endonuclease 4571979..4573010 Isosphaera pallida ATCC 43644 10157282 YP_004180248.1 CDS Isop_3135 NC_014962.1 4573464 4574417 R KEGG: ecb:100069906 hypothetical LOC100069906; SPTR: Putative uncharacterized protein; hypothetical protein complement(4573464..4574417) Isosphaera pallida ATCC 43644 10157283 YP_004180249.1 CDS Isop_3136 NC_014962.1 4574782 4577496 D KEGG: sus:Acid_6317 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4574782..4577496 Isosphaera pallida ATCC 43644 10157284 YP_004180250.1 CDS Isop_3137 NC_014962.1 4577614 4577922 D COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterPro IPR001623; KEGG: sus:Acid_6318 heat shock protein DnaJ domain-containing protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; SPTR: Putative uncharacterized protein; PFAM: DnaJ domain; heat shock protein DnaJ domain-containing protein 4577614..4577922 Isosphaera pallida ATCC 43644 10157285 YP_004180251.1 CDS Isop_3138 NC_014962.1 4577919 4578773 D COGs: COG0576 Molecular chaperone GrpE (heat shock protein); InterPro IPR002052: IPR000740; KEGG: nhl:Nhal_2516 GrpE protein; PFAM: GrpE protein; SPTR: Protein grpE; PFAM: GrpE; GrpE protein HSP-70 cofactor 4577919..4578773 Isosphaera pallida ATCC 43644 10157286 YP_004180252.1 CDS Isop_3139 NC_014962.1 4578978 4580816 D COGs: COG0443 Molecular chaperone; InterPro IPR018181: IPR001023: IPR013126; KEGG: nhl:Nhal_2517 heat shock protein 70; PFAM: Heat shock protein 70; SPTR: Heat shock protein 70; PFAM: Hsp70 protein; Heat shock protein 70 4578978..4580816 Isosphaera pallida ATCC 43644 10157287 YP_004180253.1 CDS Isop_3140 NC_014962.1 4580822 4581178 D KEGG: azl:AZL_a04590 exonuclease; SPTR: Putative uncharacterized protein; exonuclease 4580822..4581178 Isosphaera pallida ATCC 43644 10157288 YP_004180254.1 CDS Isop_3141 NC_014962.1 4581316 4582467 R InterPro IPR001120: IPR012902; KEGG: plm:Plim_1627 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein complement(4581316..4582467) Isosphaera pallida ATCC 43644 10157289 YP_004180255.1 CDS Isop_3142 NC_014962.1 4582836 4583924 D KEGG: rba:RB220 signal peptide; SPTR: Putative uncharacterized protein; hypothetical protein 4582836..4583924 Isosphaera pallida ATCC 43644 10157290 YP_004180256.1 CDS Isop_3143 NC_014962.1 4583962 4584207 D KEGG: sro:Sros_5268 ABC transporter, ATP-binding protein; SPTR: Vegetative cell wall protein gp1; ABC transporter ATP-binding protein 4583962..4584207 Isosphaera pallida ATCC 43644 10157291 YP_004180257.1 CDS Isop_3144 NC_014962.1 4584097 4585062 R InterPro IPR003400; KEGG: plm:Plim_1698 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR complement(4584097..4585062) Isosphaera pallida ATCC 43644 10157292 YP_004180258.1 CDS Isop_3145 NC_014962.1 4585091 4585552 R COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: plm:Plim_1697 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR complement(4585091..4585552) Isosphaera pallida ATCC 43644 10157293 YP_004180259.1 CDS Isop_3146 NC_014962.1 4585716 4586411 R COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: psl:Psta_2717 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Probable TolQ; PFAM: MotA/TolQ/ExbB proton channel family; MotA/TolQ/ExbB proton channel complement(4585716..4586411) Isosphaera pallida ATCC 43644 10157294 YP_004180260.1 CDS Isop_3147 NC_014962.1 4587065 4587913 D COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789: IPR003594; KEGG: sus:Acid_7798 response regulator receiver protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; SMART: response regulator receiver; SPTR: Response regulator receiver protein; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; response regulator receiver protein 4587065..4587913 Isosphaera pallida ATCC 43644 10157295 YP_004180261.1 CDS Isop_3148 NC_014962.1 4588212 4588721 D COGs: COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase; InterPro IPR000031; KEGG: dau:Daud_1973 phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; PRIAM: Phosphoribosylaminoimidazole carboxylase; SPTR: Phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein; 5-(carboxyamino)imidazole ribonucleotide mutase 4588212..4588721 Isosphaera pallida ATCC 43644 10157296 YP_004180262.1 CDS Isop_3149 NC_014962.1 4588718 4590166 D COGs: COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase); InterPro IPR005875: IPR011761: IPR003135; KEGG: sus:Acid_5043 phosphoribosylaminoimidazole carboxylase; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; PRIAM: Phosphoribosylaminoimidazole carboxylase; SPTR: Phosphoribosylaminoimidazole carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurK protein; phosphoribosylaminoimidazole carboxylase ATPase subunit 4588718..4590166 Isosphaera pallida ATCC 43644 10157297 YP_004180263.1 CDS Isop_3150 NC_014962.1 4590221 4590811 D COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: mxa:MXAN_0190 hypothetical protein; PFAM: Penicillinase repressor; SPTR: Putative uncharacterized protein; PFAM: Penicillinase repressor; CopY family transcriptional repressor 4590221..4590811 Isosphaera pallida ATCC 43644 10157298 YP_004180264.1 CDS Isop_3151 NC_014962.1 4591001 4592713 D InterPro IPR008756; KEGG: sus:Acid_5553 peptidase M56, BlaR1; PFAM: peptidase M56 BlaR1; SPTR: Peptidase M56, BlaR1; peptidase M56 BlaR1 4591001..4592713 Isosphaera pallida ATCC 43644 10157299 YP_004180265.1 CDS Isop_3152 NC_014962.1 4593119 4595464 D COGs: COG0296 1 4-alpha-glucan branching enzyme; InterProIPR006407: IPR006589: IPR004193: IPR006047: IPR 006048; KEGG: azl:AZL_a00400 1,4-alpha-glucan branching enzyme; PFAM: alpha amylase all-beta; alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; SMART: alpha amylase catalytic sub domain; SPTR: 1,4-alpha-glucan-branching enzyme; TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: Alpha amylase, C-terminal all-beta domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase; glycogen branching protein 4593119..4595464 Isosphaera pallida ATCC 43644 10157300 YP_004180266.1 CDS Isop_3153 NC_014962.1 4595738 4596535 D COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013217; KEGG: pmt:PMT0414 hypothetical protein; PFAM: Methyltransferase type 12; SPTR: SAM (And some other nucleotide) binding motif; PFAM: Methyltransferase domain; type 12 methyltransferase 4595738..4596535 Isosphaera pallida ATCC 43644 10157301 YP_004180267.1 CDS Isop_3154 NC_014962.1 4596532 4597878 D COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR003042: IPR006076; KEGG: sye:Syncc9902_1340 hypothetical protein; PFAM: FAD dependent oxidoreductase; SPTR: Putative uncharacterized protein; PFAM: FAD binding domain; FAD dependent oxidoreductase 4596532..4597878 Isosphaera pallida ATCC 43644 10157302 YP_004180268.1 CDS Isop_3155 NC_014962.1 4597882 4599093 D COGs: COG3424 naringenin-chalcone synthase; InterPro IPR011141: IPR001099: IPR012328; KEGG: syw:SYNW0993 putative chalcone synthase; PFAM: chalcone and stilbene synthase domain protein; PRIAM: Naringenin-chalcone synthase; SPTR: Chalcone synthase (CHS); PFAM: Chalcone and stilbene synthases, N-terminal domain; Chalcone and stilbene synthases, C-terminal domain; Naringenin-chalcone synthase 4597882..4599093 Isosphaera pallida ATCC 43644 10157303 YP_004180269.1 CDS Isop_3156 NC_014962.1 4599165 4600622 R InterPro IPR011031; KEGG: sus:Acid_4315 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4599165..4600622) Isosphaera pallida ATCC 43644 10157304 YP_004180270.1 CDS Isop_3157 NC_014962.1 4601188 4602903 D COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterProIPR001949: IPR002023: IPR011538: IPR019554: IPR 019575; KEGG: kfl:Kfla_2118 respiratory-chain NADH dehydrogenase domain 51 kDa subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH dehydrogenase (ubiquinone) 24 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; SPTR: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; respiratory-chain NADH dehydrogenase domain 51 kDa subunit 4601188..4602903 Isosphaera pallida ATCC 43644 10157305 YP_004180271.1 CDS Isop_3158 NC_014962.1 4603015 4605387 D COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR017900: IPR018528: IPR018488: IPR002373: IPR 000595: IPR001041: IPR017896; KEGG: sus:Acid_4310 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding; ferredoxin; SMART: cyclic nucleotide-binding; SPTR: Cyclic nucleotide-binding protein; PFAM: Cyclic nucleotide-binding domain; cyclic nucleotide-binding protein 4603015..4605387 Isosphaera pallida ATCC 43644 10157306 YP_004180272.1 CDS Isop_3159 NC_014962.1 4605663 4605959 D KEGG: afr:AFE_0361 hypothetical protein; SPTR: Vgr-related protein; hypothetical protein 4605663..4605959 Isosphaera pallida ATCC 43644 10157307 YP_004180273.1 CDS Isop_3160 NC_014962.1 4605985 4606788 D COGs: COG0120 Ribose 5-phosphate isomerase; InterPro IPR004788; KEGG: scl:sce1758 ribose-5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase; PRIAM: Ribose-5-phosphate isomerase; SPTR: Ribose 5-phosphate isomerase (Phosphoriboisomerase A) (PRI); TIGRFAM: ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase A (phosphoriboisomerase A); TIGRFAM: ribose 5-phosphate isomerase; ribose 5-phosphate isomerase 4605985..4606788 Isosphaera pallida ATCC 43644 10157308 YP_004180274.1 CDS Isop_3161 NC_014962.1 4606937 4608121 D KEGG: sus:Acid_4311 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4606937..4608121 Isosphaera pallida ATCC 43644 10157309 YP_004180275.1 CDS Isop_3162 NC_014962.1 4608130 4609902 D InterPro IPR011031; KEGG: sus:Acid_4312 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4608130..4609902 Isosphaera pallida ATCC 43644 10157310 YP_004180276.1 CDS Isop_3163 NC_014962.1 4610061 4610498 R KEGG: srm:SRM_01224 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4610061..4610498) Isosphaera pallida ATCC 43644 10157311 YP_004180277.1 CDS Isop_3164 NC_014962.1 4610485 4610700 R KEGG: hla:Hlac_0734 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4610485..4610700) Isosphaera pallida ATCC 43644 10157312 YP_004180278.1 CDS Isop_3165 NC_014962.1 4611003 4612688 D COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; InterPro IPR020558: IPR004404: IPR000581; KEGG: rxy:Rxyl_1326 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; PRIAM: Dihydroxy-acid dehydratase; SPTR: Dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase; dihydroxyacid dehydratase 4611003..4612688 Isosphaera pallida ATCC 43644 10157313 YP_004180279.1 CDS Isop_3166 NC_014962.1 4612742 4612909 D hypothetical protein 4612742..4612909 Isosphaera pallida ATCC 43644 10157314 YP_004180280.1 CDS Isop_3167 NC_014962.1 4612978 4613481 D COGs: COG0102 Ribosomal protein L13; InterPro IPR005823: IPR005822; KEGG: hor:Hore_02460 50S ribosomal protein L13; PFAM: ribosomal protein L13; SPTR: 50S ribosomal protein L13; TIGRFAM: ribosomal protein L13; PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type; 50S ribosomal protein L13 4612978..4613481 Isosphaera pallida ATCC 43644 10157315 YP_004180281.1 CDS Isop_3168 NC_014962.1 4613673 4614074 D COGs: COG0103 Ribosomal protein S9; InterPro IPR000754; KEGG: eba:ebA937 30S ribosomal protein S9; PFAM: ribosomal protein S9; SPTR: 30S ribosomal protein S9; PFAM: Ribosomal protein S9/S16; 30S ribosomal protein S9 4613673..4614074 Isosphaera pallida ATCC 43644 10157316 YP_004180282.1 CDS Isop_3169 NC_014962.1 4614419 4616212 R COGs: COG0029 Aspartate oxidase; InterPro IPR005288: IPR003953: IPR004112; KEGG: psl:Psta_2205 L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; PRIAM: L-aspartate oxidase; SPTR: L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: domain; FAD binding domain; TIGRFAM: L-aspartate oxidase; L-aspartate oxidase complement(4614419..4616212) Isosphaera pallida ATCC 43644 10157317 YP_004180283.1 CDS Isop_3170 NC_014962.1 4616481 4621418 R KEGG: plm:Plim_2314 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4616481..4621418) Isosphaera pallida ATCC 43644 10157318 YP_004180284.1 CDS Isop_3171 NC_014962.1 4621896 4622942 D InterPro IPR011761; KEGG: bja:bll8229 hypothetical protein; SPTR: D-alanine--D-alanine ligase; PFAM: D-ala D-ala ligase C-terminus; hypothetical protein 4621896..4622942 Isosphaera pallida ATCC 43644 10157319 YP_004180285.1 CDS Isop_3172 NC_014962.1 4622970 4623920 R COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: sus:Acid_1540 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: Methyltransferase domain; type 11 methyltransferase complement(4622970..4623920) Isosphaera pallida ATCC 43644 10157320 YP_004180286.1 CDS Isop_3173 NC_014962.1 4624166 4624627 R KEGG: pol:Bpro_5556 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase-like; SPTR: UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase-like; hypothetical protein complement(4624166..4624627) Isosphaera pallida ATCC 43644 10157321 YP_004180287.1 CDS Isop_3174 NC_014962.1 4624846 4625484 R KEGG: mdo:100032383 hypothetical protein LOC100032383; SPTR: Whole genome shotgun sequence assembly, scaffold_59; hypothetical protein complement(4624846..4625484) Isosphaera pallida ATCC 43644 10157322 YP_004180288.1 CDS Isop_3175 NC_014962.1 4625693 4626316 D KEGG: mrb:Mrub_1590 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4625693..4626316 Isosphaera pallida ATCC 43644 10157323 YP_004180289.1 CDS Isop_3176 NC_014962.1 4626469 4627596 D InterPro IPR005135; KEGG: cpc:Cpar_1256 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/Exonuclease/phosphatase family; endonuclease/exonuclease/phosphatase 4626469..4627596 Isosphaera pallida ATCC 43644 10157324 YP_004180290.1 CDS Isop_3177 NC_014962.1 4627874 4629229 R InterPro IPR006311: IPR017909: IPR011447; KEGG: plm:Plim_0286 protein of unknown function DUF1552; PFAM: protein of unknown function DUF1552; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1552); hypothetical protein complement(4627874..4629229) Isosphaera pallida ATCC 43644 10157325 YP_004180291.1 CDS Isop_3178 NC_014962.1 4629370 4631835 R InterProIPR009056: IPR013036: IPR013043: IPR013042: IPR 013039; KEGG: plm:Plim_0287 protein of unknown function DUF1592; PFAM: protein of unknown function DUF1588; protein of unknown function DUF1592; protein of unknown function DUF1587; protein of unknown function DUF1595; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1587); Protein of unknown function (DUF1592); Protein of unknown function (DUF1588); Protein of unknown function (DUF1595); Protein of unknown function (DUF1585); hypothetical protein complement(4629370..4631835) Isosphaera pallida ATCC 43644 10157326 YP_004180292.1 CDS Isop_3179 NC_014962.1 4632488 4634053 D KEGG: rba:RB850 signal peptide; SPTR: Putative uncharacterized protein; hypothetical protein 4632488..4634053 Isosphaera pallida ATCC 43644 10157327 YP_004180293.1 CDS Isop_3180 NC_014962.1 4634791 4636590 D KEGG: gob:Gobs_4095 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4634791..4636590 Isosphaera pallida ATCC 43644 10157328 YP_004180294.1 CDS Isop_3181 NC_014962.1 4637162 4641109 D COGs: COG2183 Transcriptional accessory protein; InterPro IPR006641: IPR003029: IPR018974: IPR018316; KEGG: plm:Plim_2413 RNA binding S1 domain protein; PFAM: Tex-like protein-like; Tubulin/FtsZ, 2-layer sandwich domain; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; SPTR: Ribosomal protein S1-like RNA-binding domain; PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; Tex-like protein 4637162..4641109 Isosphaera pallida ATCC 43644 10157329 YP_004180295.1 CDS Isop_3182 NC_014962.1 4641416 4642690 D COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: plm:Plim_3659 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: ABC transporter, permease protein; PFAM: Predicted permease; hypothetical protein 4641416..4642690 Isosphaera pallida ATCC 43644 10157330 YP_004180296.1 CDS Isop_3183 NC_014962.1 4642894 4643679 D COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR017871: IPR003593: IPR003439; KEGG: plm:Plim_2328 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter; ABC transporter-like protein 4642894..4643679 Isosphaera pallida ATCC 43644 10157331 YP_004180297.1 CDS Isop_3184 NC_014962.1 4643820 4644299 D COGs: COG0545 FKBP-type peptidyl-prolyl cis-trans isomerase 1; InterPro IPR001179; KEGG: syf:Synpcc7942_2354 peptidylprolyl isomerase; PFAM: peptidylprolyl isomerase FKBP-type; SPTR: Peptidyl-prolyl cis-trans isomerase; PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; FKBP-type peptidylprolyl isomerase 4643820..4644299 Isosphaera pallida ATCC 43644 10157332 YP_004180298.1 CDS Isop_3185 NC_014962.1 4644296 4645390 D KEGG: plm:Plim_3801 thioredoxin domain protein; SPTR: Thioredoxin domain protein; hypothetical protein 4644296..4645390 Isosphaera pallida ATCC 43644 10157333 YP_004180299.1 CDS Isop_3186 NC_014962.1 4645906 4646664 D COGs: COG4760 membrane protein; InterPro IPR010539; KEGG: gym:GYMC10_6220 protein of unknown function DUF1112; SPTR: Putative uncharacterized protein; hypothetical protein 4645906..4646664 Isosphaera pallida ATCC 43644 10157334 YP_004180300.1 CDS Isop_3187 NC_014962.1 4646903 4647679 D COGs: COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase; InterPro IPR007085; KEGG: llm:llmg_0544 phosphopantothenate--cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; SPTR: Putative phosphopantothenate--cysteine ligase; manually curated; PFAM: DNA / pantothenate metabolism flavoprotein; DNA/pantothenate metabolism flavoprotein domain-containing protein 4646903..4647679 Isosphaera pallida ATCC 43644 10157335 YP_004180301.1 CDS Isop_3188 NC_014962.1 4647769 4648410 R COGs: COG4566 Response regulator; InterPro IPR000792: IPR001789; KEGG: alv:Alvin_0640 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: Two component transcriptional regulator, LuxR family; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; two component LuxR family transcriptional regulator complement(4647769..4648410) Isosphaera pallida ATCC 43644 10157336 YP_004180302.1 CDS Isop_3189 NC_014962.1 4648541 4652413 R COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR004358: IPR000014: IPR001610: IPR003661: IPR 003594: IPR005467: IPR000700: IPR013656: IPR013655; KEGG: eba:ebA126 two-component sensor kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; SPTR: Two-component sensor kinase; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; PAS/PAC sensor signal transduction histidine kinase complement(4648541..4652413) Isosphaera pallida ATCC 43644 10157337 YP_004180303.1 CDS Isop_3190 NC_014962.1 4652763 4654904 R COGs: COG0750 membrane-associated Zn-dependent protease 1; InterPro IPR001478: IPR008915; KEGG: plm:Plim_3363 peptidase M50; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: Peptidase M50; PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP; peptidase M50 complement(4652763..4654904) Isosphaera pallida ATCC 43644 10157338 YP_004180304.1 CDS Isop_3191 NC_014962.1 4654874 4656211 R COGs: COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro IPR003821: IPR013512: IPR013644; KEGG: hmo:HM1_2264 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain-containing protein; PRIAM: 1-deoxy-D-xylulose-5-phosphate reductoisomerase; SPTR: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(4654874..4656211) Isosphaera pallida ATCC 43644 10157339 YP_004180305.1 CDS Isop_3192 NC_014962.1 4656512 4657456 R COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: gme:Gmet_2031 sugar transferase; PFAM: sugar transferase; SPTR: Sugar transferase, PEP-CTERM system associated; PFAM: Bacterial sugar transferase; sugar transferase complement(4656512..4657456) Isosphaera pallida ATCC 43644 10157340 YP_004180306.1 CDS Isop_3193 NC_014962.1 4657574 4658821 R KEGG: plm:Plim_3876 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4657574..4658821) Isosphaera pallida ATCC 43644 10157341 YP_004180307.1 CDS Isop_3194 NC_014962.1 4659012 4660331 R COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: afw:Anae109_2016 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase, group 2 family protein; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase complement(4659012..4660331) Isosphaera pallida ATCC 43644 10157342 YP_004180308.1 CDS Isop_3195 NC_014962.1 4660328 4660873 R COGs: COG1045 Serine acetyltransferase; InterPro IPR001451; KEGG: scl:sce5074 putative serineacetyltransferase; SPTR: Putative serineacetyltransferase; putative serineacetyltransferase complement(4660328..4660873) Isosphaera pallida ATCC 43644 10157343 YP_004180309.1 CDS Isop_3196 NC_014962.1 4661032 4662966 R InterPro IPR002035; KEGG: rrs:RoseRS_2799 von Willebrand factor, type A; SPTR: von Willebrand factor, type A; von Willebrand factor, type A complement(4661032..4662966) Isosphaera pallida ATCC 43644 10157344 YP_004180310.1 CDS Isop_3197 NC_014962.1 4663166 4664464 R COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sus:Acid_0271 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase complement(4663166..4664464) Isosphaera pallida ATCC 43644 10157345 YP_004180311.1 CDS Isop_3198 NC_014962.1 4664476 4665825 R COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: scl:sce1301 glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Glycosyltransferase; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase complement(4664476..4665825) Isosphaera pallida ATCC 43644 10157346 YP_004180312.1 CDS Isop_3199 NC_014962.1 4665822 4667225 R KEGG: fal:FRAAL1778 hypothetical protein; SPTR: Glycosyl transferase family 39; hypothetical protein complement(4665822..4667225) Isosphaera pallida ATCC 43644 10157347 YP_004180313.1 CDS Isop_3200 NC_014962.1 4667254 4668489 R COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: scl:sce0549 glycogen synthase; PFAM: glycosyl transferase group 1; SPTR: Glycogen synthase; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase complement(4667254..4668489) Isosphaera pallida ATCC 43644 10157348 YP_004180314.1 CDS Isop_3201 NC_014962.1 4668550 4669722 R COGs: COG3568 Metal-dependent hydrolase; InterPro IPR005135; KEGG: scl:sce4697 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/Exonuclease/phosphatase; PFAM: Endonuclease/Exonuclease/phosphatase family; endonuclease/exonuclease/phosphatase complement(4668550..4669722) Isosphaera pallida ATCC 43644 10157349 YP_004180315.1 CDS Isop_3202 NC_014962.1 4669727 4671241 R KEGG: ttu:TERTU_3103 putative type I phosphodiesterase/nucleotide pyrophosphatase; SPTR: Putative type I phosphodiesterase/nucleotide pyrophosphatase; PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase; hypothetical protein complement(4669727..4671241) Isosphaera pallida ATCC 43644 10157350 YP_004180316.1 CDS Isop_3203 NC_014962.1 4671468 4672565 R COGs: COG0429 hydrolase of the alpha/beta-hydrolase fold; InterPro IPR000952: IPR012020; KEGG: psl:Psta_4160 alpha/beta hydrolase fold protein; SPTR: Putative uncharacterized protein; alpha/beta hydrolase fold protein complement(4671468..4672565) Isosphaera pallida ATCC 43644 10157351 YP_004180317.1 CDS Isop_3204 NC_014962.1 4672562 4674163 R KEGG: psl:Psta_2457 tetratricopeptide TPR_2 repeat protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4672562..4674163) Isosphaera pallida ATCC 43644 10157352 YP_004180318.1 CDS Isop_3205 NC_014962.1 4674273 4675787 R KEGG: psl:Psta_2457 tetratricopeptide TPR_2 repeat protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4674273..4675787) Isosphaera pallida ATCC 43644 10157353 YP_004180319.1 CDS Isop_3206 NC_014962.1 4676274 4677233 D KEGG: rpb:RPB_0600 translation initiation factor IF-2; SPTR: Predicted protein; hypothetical protein 4676274..4677233 Isosphaera pallida ATCC 43644 10157354 YP_004180320.1 CDS Isop_3207 NC_014962.1 4677490 4678953 R COGs: COG0362 6-phosphogluconate dehydrogenase; InterProIPR006184: IPR006183: IPR006113: IPR006115: IPR 006114; KEGG: cja:CJA_3099 6-phosphogluconate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase domain-containing protein; 6-phosphogluconate dehydrogenase NAD-binding; SPTR: 6-phosphogluconate dehydrogenase, decarboxylating; TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase, C-terminal domain; NAD binding domain of 6-phosphogluconate dehydrogenase; TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphogluconate dehydrogenase complement(4677490..4678953) Isosphaera pallida ATCC 43644 10157355 YP_004180321.1 CDS Isop_3208 NC_014962.1 4679077 4680378 R COGs: COG0205 6-phosphofructokinase; InterPro IPR000023: IPR011404; KEGG: psl:Psta_2483 phosphofructokinase; SPTR: Phosphofructokinase; PFAM: Phosphofructokinase; phosphofructokinase complement(4679077..4680378) Isosphaera pallida ATCC 43644 10157356 YP_004180322.1 CDS Isop_3210 NC_014962.1 4681345 4682247 R InterPro IPR005834; KEGG: psl:Psta_2485 hypothetical protein; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: Putative uncharacterized protein; haloacid dehalogenase domain-containing protein hydrolase complement(4681345..4682247) Isosphaera pallida ATCC 43644 10157358 YP_004180323.1 CDS Isop_3211 NC_014962.1 4682364 4684115 R KEGG: msm:MSMEG_6143 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4682364..4684115) Isosphaera pallida ATCC 43644 10157359 YP_004180324.1 CDS Isop_3212 NC_014962.1 4684301 4686031 R KEGG: mse:Msed_1428 hydrogenase 4 subunit F; SPTR: Membrane protein-like protein; hypothetical protein complement(4684301..4686031) Isosphaera pallida ATCC 43644 10157360 YP_004180325.1 CDS Isop_3213 NC_014962.1 4686217 4687944 R KEGG: bph:Bphy_4873 major facilitator transporter; SPTR: Major facilitator superfamily MFS_1; hypothetical protein complement(4686217..4687944) Isosphaera pallida ATCC 43644 10157361 YP_004180326.1 CDS Isop_3214 NC_014962.1 4688547 4690211 D COGs: COG1232 Protoporphyrinogen oxidase; InterPro IPR003042: IPR004572: IPR002937; KEGG: psl:Psta_4696 protoporphyrinogen oxidase; PFAM: amine oxidase; SPTR: Protoporphyrinogen IX and coproporphyrinogen III oxidase; TIGRFAM: protoporphyrinogen oxidase; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: protoporphyrinogen oxidase; protoporphyrinogen oxidase 4688547..4690211 Isosphaera pallida ATCC 43644 10157362 YP_004180327.1 CDS Isop_3216 NC_014962.1 4690845 4691570 R InterPro IPR010496; KEGG: psl:Psta_1370 protein of unknown function DUF1080; PFAM: protein of unknown function DUF1080; SPTR: Putative secreted glycosyl hydrolase; PFAM: Domain of Unknown Function (DUF1080); hypothetical protein complement(4690845..4691570) Isosphaera pallida ATCC 43644 10157364 YP_004180328.1 CDS Isop_3217 NC_014962.1 4691833 4693446 R COGs: COG3540 Phosphodiesterase/alkaline phosphatase D; KEGG: rba:RB8889 alkaline phosphatase D; PRIAM: Alkaline phosphatase; SPTR: Alkaline phosphatase D (Precursor); PFAM: PhoD-like phosphatase; alkaline phosphatase complement(4691833..4693446) Isosphaera pallida ATCC 43644 10157365 YP_004180329.1 CDS Isop_3218 NC_014962.1 4694483 4695634 R KEGG: paa:Paes_0150 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4694483..4695634) Isosphaera pallida ATCC 43644 10157366 YP_004180330.1 CDS Isop_3219 NC_014962.1 4695765 4697147 R COGs: COG3004 Na+/H+ antiporter; InterPro IPR004670; KEGG: psl:Psta_4077 Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter NhaA; SPTR: Na(+)/H(+) antiporter nhaA; TIGRFAM: Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter 1; TIGRFAM: Na+/H+ antiporter NhaA; TC 2.A.33.1.1; NhaA family sodium/proton antiporter complement(4695765..4697147) Isosphaera pallida ATCC 43644 10157367 YP_004180331.1 CDS Isop_3220 NC_014962.1 4697586 4699556 D InterPro IPR017936: IPR000866; KEGG: psl:Psta_0780 hypothetical protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Putative uncharacterized protein; PFAM: Copper type II ascorbate-dependent monooxygenase, C-terminal domain; AhpC/TSA family; alkyl hydroperoxide reductase 4697586..4699556 Isosphaera pallida ATCC 43644 10157368 YP_004180332.1 CDS Isop_3221 NC_014962.1 4699608 4699919 D KEGG: sus:Acid_3142 NADP oxidoreductase, coenzyme F420-dependent; SPTR: NADP oxidoreductase coenzyme F420-dependent; hypothetical protein 4699608..4699919 Isosphaera pallida ATCC 43644 10157369 YP_004180333.1 CDS Isop_3222 NC_014962.1 4699892 4700095 R KEGG: btk:BT9727_0872 oxidoreductase; hypothetical protein complement(4699892..4700095) Isosphaera pallida ATCC 43644 10157370 YP_004180334.1 CDS Isop_3223 NC_014962.1 4700125 4701057 D KEGG: rca:Rcas_0326 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4700125..4701057 Isosphaera pallida ATCC 43644 10157371 YP_004180335.1 CDS Isop_3224 NC_014962.1 4701054 4701869 D COGs: COG4422 Bacteriophage protein gp37; InterPro IPR011101; KEGG: hoh:Hoch_6140 Gp37Gp68 family protein; PFAM: Gp37Gp68 family protein; SPTR: Phage Gp37Gp68; PFAM: Phage protein Gp37/Gp68; Gp37Gp68 family protein 4701054..4701869 Isosphaera pallida ATCC 43644 10157372 YP_004180336.1 CDS Isop_3225 NC_014962.1 4702061 4702903 D COGs: COG2345 transcriptional regulator protein; InterPro IPR000485: IPR001845; KEGG: plm:Plim_2387 transcriptional regulator protein-like protein; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; SPTR: Putative uncharacterized protein; PFAM: Bacterial regulatory protein, arsR family; putative transcriptional regulator 4702061..4702903 Isosphaera pallida ATCC 43644 10157373 YP_004180337.1 CDS Isop_3226 NC_014962.1 4703167 4703994 D COGs: COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component; InterPro IPR017871: IPR010230: IPR003593: IPR003439; KEGG: plm:Plim_2389 FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: FeS assembly ATPase SufC; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC; FeS assembly ATPase SufC 4703167..4703994 Isosphaera pallida ATCC 43644 10157374 YP_004180338.1 CDS Isop_3227 NC_014962.1 4704106 4705527 D COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR010231: IPR000825; KEGG: plm:Plim_2390 FeS assembly protein SufB; PFAM: SufBD protein; SPTR: FeS assembly protein SufB; TIGRFAM: FeS assembly protein SufB; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB; Iron-regulated ABC transporter membrane component SufB 4704106..4705527 Isosphaera pallida ATCC 43644 10157375 YP_004180339.1 CDS Isop_3228 NC_014962.1 4705766 4707157 D COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR000825; KEGG: plm:Plim_2391 FeS assembly protein SufD; PFAM: SufBD protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD, group 1; SufBD protein 4705766..4707157 Isosphaera pallida ATCC 43644 10157376 YP_004180340.1 CDS Isop_3229 NC_014962.1 4707416 4708282 D COGs: COG2897 Rhodanese-related sulfurtransferase; InterPro IPR001307: IPR001763; KEGG: rmr:Rmar_0983 rhodanese domain protein; PFAM: Rhodanese domain protein; PRIAM: Thiosulfate sulfurtransferase; SMART: Rhodanese domain protein; SPTR: Rhodanese domain protein; PFAM: Rhodanese-like domain; thiosulfate sulfurtransferase 4707416..4708282 Isosphaera pallida ATCC 43644 10157377 YP_004180341.1 CDS Isop_3230 NC_014962.1 4708384 4708842 D COGs: COG2166 SufE protein probably involved in Fe-S center assembly; InterPro IPR003808; KEGG: rmr:Rmar_0984 Fe-S metabolism associated SufE; PFAM: Fe-S metabolism associated SufE; SPTR: Fe-S metabolism associated SufE; PFAM: Fe-S metabolism associated domain; Fe-S metabolism associated SufE 4708384..4708842 Isosphaera pallida ATCC 43644 10157378 YP_004180342.1 CDS Isop_3231 NC_014962.1 4708978 4709301 D COGs: COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase; InterPro IPR017941; KEGG: psl:Psta_4541 protein of unknown function DUF59; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: Putative uncharacterized protein; PFAM: Rieske [2Fe-2S] domain; Rieske (2Fe-2S) domain-containing protein 4708978..4709301 Isosphaera pallida ATCC 43644 10157379 YP_004180343.1 CDS Isop_3232 NC_014962.1 4709529 4709840 D COGs: COG2151 metal-sulfur cluster biosynthetic protein; InterPro IPR002744; KEGG: plm:Plim_2392 protein of unknown function DUF59; PFAM: protein of unknown function DUF59; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF59; hypothetical protein 4709529..4709840 Isosphaera pallida ATCC 43644 10157380 YP_004180344.1 CDS Isop_3233 NC_014962.1 4710189 4711220 D COGs: COG0205 6-phosphofructokinase; InterPro IPR015912: IPR000023: IPR012003; KEGG: plm:Plim_0062 6-phosphofructokinase; PFAM: phosphofructokinase; SPTR: 6-phosphofructokinase; PFAM: Phosphofructokinase; TIGRFAM: phosphofructokinase; pyrophosphate-dependent phosphofructokinase 4710189..4711220 Isosphaera pallida ATCC 43644 10157381 YP_004180345.1 CDS Isop_3234 NC_014962.1 4711346 4711486 D KEGG: gym:GYMC10_5186 periplasmic binding protein; SPTR: Periplasmic binding protein; periplasmic-binding protein 4711346..4711486 Isosphaera pallida ATCC 43644 10157382 YP_004180346.1 CDS Isop_3235 NC_014962.1 4711818 4712855 D InterPro IPR001120: IPR012902; KEGG: psl:Psta_2737 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 4711818..4712855 Isosphaera pallida ATCC 43644 10157383 YP_004180347.1 CDS Isop_3236 NC_014962.1 4718456 4718560 D hypothetical protein 4718456..4718560 Isosphaera pallida ATCC 43644 10157386 YP_004180348.1 CDS Isop_3237 NC_014962.1 4718950 4719966 R COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: plm:Plim_0551 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: Putative uncharacterized protein; PFAM: Xylose isomerase-like TIM barrel; xylose isomerase domain-containing protein complement(4718950..4719966) Isosphaera pallida ATCC 43644 10157388 YP_004180349.1 CDS Isop_3238 NC_014962.1 4720060 4720344 R KEGG: caa:Caka_2237 TonB family protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4720060..4720344) Isosphaera pallida ATCC 43644 10157389 YP_004180350.1 CDS Isop_3239 NC_014962.1 4720666 4723134 D COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterPro IPR017871: IPR003593: IPR003439: IPR017940; KEGG: psl:Psta_2756 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Probable toxin secretion ABC transporter ATP-binding protein; PFAM: ABC transporter; ABC transporter-like protein 4720666..4723134 Isosphaera pallida ATCC 43644 10157390 YP_004180351.1 CDS Isop_3240 NC_014962.1 4723139 4724701 D InterPro IPR000089; KEGG: mfa:Mfla_2222 secretion protein HlyD; PFAM: biotin/lipoyl attachment domain-containing protein; SPTR: Secretion protein HlyD; biotin/lipoyl attachment domain-containing protein 4723139..4724701 Isosphaera pallida ATCC 43644 10157391 YP_004180352.1 CDS Isop_3241 NC_014962.1 4725160 4727307 D COGs: COG1538 Outer membrane protein; KEGG: plm:Plim_2028 outer membrane protein-like protein; SPTR: Outer membrane protein-like protein; PFAM: Outer membrane efflux protein; hypothetical protein 4725160..4727307 Isosphaera pallida ATCC 43644 10157392 YP_004180353.1 CDS Isop_3242 NC_014962.1 4727336 4728667 R COGs: COG0523 Putative GTPase (G3E family); InterPro IPR003495: IPR011629; KEGG: rrs:RoseRS_3105 cobalamin synthesis protein, P47K; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; SPTR: Cobalamin synthesis protein, P47K; PFAM: CobW/HypB/UreG, nucleotide-binding domain; Cobalamin synthesis protein cobW C-terminal domain; cobalamin synthesis protein P47K complement(4727336..4728667) Isosphaera pallida ATCC 43644 10157393 YP_004180354.1 CDS Isop_3243 NC_014962.1 4728690 4729424 R COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR017871: IPR003593: IPR003439; KEGG: gvi:glr3104 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Glr3104 protein; PFAM: ABC transporter; ABC transporter-like protein complement(4728690..4729424) Isosphaera pallida ATCC 43644 10157394 YP_004180355.1 CDS Isop_3244 NC_014962.1 4729547 4731013 R COGs: COG1277 ABC-type transport system involved in multi-copper enzyme maturation permease component; KEGG: gvi:glr3106 hypothetical protein; SPTR: Glr3106 protein; PFAM: Domain of unknown function (DUF3526); hypothetical protein complement(4729547..4731013) Isosphaera pallida ATCC 43644 10157395 YP_004180356.1 CDS Isop_3245 NC_014962.1 4731163 4732602 R COGs: COG1277 ABC-type transport system involved in multi-copper enzyme maturation permease component; KEGG: gvi:glr3105 hypothetical protein; SPTR: Glr3105 protein; PFAM: Domain of unknown function (DUF3526); hypothetical protein complement(4731163..4732602) Isosphaera pallida ATCC 43644 10157396 YP_004180357.1 CDS Isop_3246 NC_014962.1 4732788 4733924 R InterPro IPR019734; KEGG: afw:Anae109_3930 TPR repeat-containing protein; SPTR: Tetratricopeptide TPR_2 repeat protein; hypothetical protein complement(4732788..4733924) Isosphaera pallida ATCC 43644 10157397 YP_004180358.1 CDS Isop_3247 NC_014962.1 4734280 4735104 R InterPro IPR019613; KEGG: dsa:Desal_0970 hypothetical protein; PFAM: Nickel transport complex, NikM subunit, transmembrane; SPTR: Putative uncharacterized protein; PFAM: Nickel uptake substrate-specific transmembrane region; nickel transport complex transmembrane protein NikM complement(4734280..4735104) Isosphaera pallida ATCC 43644 10157398 YP_004180359.1 CDS Isop_3248 NC_014962.1 4735571 4736446 D COGs: COG0515 Serine/threonine protein kinase; InterProIPR017441: IPR008271: IPR020635: IPR002290: IPR 000719: IPR017442; KEGG: ttj:TTHA1594 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain; serine/threonine protein kinase 4735571..4736446 Isosphaera pallida ATCC 43644 10157399 YP_004180360.1 CDS Isop_3249 NC_014962.1 4736430 4740524 R InterPro IPR006162: IPR019734: IPR013026; KEGG: cag:Cagg_0357 tetratricopeptide TPR_2 repeat protein; SPTR: Tetratricopeptide TPR_2 repeat protein; hypothetical protein complement(4736430..4740524) Isosphaera pallida ATCC 43644 10157400 YP_004180361.1 CDS Isop_3250 NC_014962.1 4740765 4740911 D KEGG: pmc:P9515_02701 isoleucyl-tRNA synthetase; hypothetical protein 4740765..4740911 Isosphaera pallida ATCC 43644 10157401 YP_004180362.1 CDS Isop_3251 NC_014962.1 4741307 4746952 D InterPro IPR018511: IPR018512: IPR001343; KEGG: swp:swp_1383 hemolysin-type calcium-binding region; PFAM: Hemolysin-type calcium-binding region; SPTR: Type I secretion target GGXGXDXXX repeat protein domain protein; PFAM: Hemolysin-type calcium-binding repeat (2 copies); hemolysin-type calcium-binding protein 4741307..4746952 Isosphaera pallida ATCC 43644 10157402 YP_004180363.1 CDS Isop_3252 NC_014962.1 4747174 4747449 R KEGG: shl:Shal_1981 histidine kinase; SPTR: Histidine kinase; hypothetical protein complement(4747174..4747449) Isosphaera pallida ATCC 43644 10157403 YP_004180364.1 CDS Isop_3253 NC_014962.1 4747434 4748102 R InterPro IPR011576; KEGG: srm:SRM_01614 pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; SPTR: Pyridoxamine 5'-phosphate oxidase; PFAM: Pyridoxamine 5'-phosphate oxidase; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(4747434..4748102) Isosphaera pallida ATCC 43644 10157404 YP_004180365.1 CDS Isop_3254 NC_014962.1 4748194 4749666 R InterPro IPR022272; KEGG: tro:trd_1637 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4748194..4749666) Isosphaera pallida ATCC 43644 10157405 YP_004180366.1 CDS Isop_3255 NC_014962.1 4749920 4752043 D KEGG: psl:Psta_0986 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4749920..4752043 Isosphaera pallida ATCC 43644 10157406 YP_004180367.1 CDS Isop_3256 NC_014962.1 4752441 4753292 D KEGG: plm:Plim_3837 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4752441..4753292 Isosphaera pallida ATCC 43644 10157407 YP_004180368.1 CDS Isop_3257 NC_014962.1 4753504 4754448 R KEGG: smd:Smed_1270 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4753504..4754448) Isosphaera pallida ATCC 43644 10157408 YP_004180369.1 CDS Isop_3258 NC_014962.1 4754690 4755715 D COGs: COG2045 Phosphosulfolactate phosphohydrolase; InterPro IPR005238; KEGG: psl:Psta_4363 2-phosphosulfolactate phosphatase; PFAM: 2-phosphosulfolactate phosphatase; SPTR: 2-phosphosulfolactate phosphatase; PFAM: 2-phosphosulpholactate phosphatase; 2-phosphosulfolactate phosphatase 4754690..4755715 Isosphaera pallida ATCC 43644 10157409 YP_004180370.1 CDS Isop_3259 NC_014962.1 4755808 4757349 D COGs: COG0423 Glycyl-tRNA synthetase (class II); InterPro IPR002315: IPR006195: IPR002314: IPR004154; KEGG: psl:Psta_4364 glycyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; SPTR: Glycyl-tRNA synthetase; TIGRFAM: glycyl-tRNA synthetase; PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: glycyl-tRNA synthetase, dimeric type; glycyl-tRNA synthetase 4755808..4757349 Isosphaera pallida ATCC 43644 10157410 YP_004180371.1 CDS Isop_3260 NC_014962.1 4757354 4758301 D COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: psl:Psta_4365 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase domain-containing protein TIM barrel; SPTR: Xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase-like TIM barrel; xylose isomerase domain-containing protein 4757354..4758301 Isosphaera pallida ATCC 43644 10157411 YP_004180372.1 CDS Isop_3261 NC_014962.1 4758488 4758982 D KEGG: mma:MM_3154 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4758488..4758982 Isosphaera pallida ATCC 43644 10157412 YP_004180373.1 CDS Isop_3262 NC_014962.1 4759155 4763747 R COGs: COG0515 Serine/threonine protein kinase; InterProIPR017441: IPR008271: IPR020635: IPR002290: IPR 000719: IPR017442; KEGG: psl:Psta_2856 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Probable serine/threonine-protein kinase pknB; PFAM: Protein kinase domain; serine/threonine protein kinase complement(4759155..4763747) Isosphaera pallida ATCC 43644 10157413 YP_004180374.1 CDS Isop_3263 NC_014962.1 4764585 4764956 D KEGG: eca:ECA3007 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4764585..4764956 Isosphaera pallida ATCC 43644 10157414 YP_004180375.1 CDS Isop_3264 NC_014962.1 4765339 4768008 D KEGG: mar:MAE_47620 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Dynamin family; hypothetical protein 4765339..4768008 Isosphaera pallida ATCC 43644 10157415 YP_004180376.1 CDS Isop_3265 NC_014962.1 4768083 4768481 D COGs: COG0239 Integral membrane protein possibly involved in chromosome condensation; InterPro IPR003691; KEGG: oca:OCAR_5427 camphor resistance protein CrcB; PFAM: Camphor resistance CrcB protein; SPTR: CrcB protein; TIGRFAM: CrcB protein; PFAM: CrcB-like protein; TIGRFAM: crcB protein; CrcB protein 4768083..4768481 Isosphaera pallida ATCC 43644 10157416 YP_004180377.1 CDS Isop_3266 NC_014962.1 4768600 4769631 D InterPro IPR001173; KEGG: ele:Elen_0843 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase 4768600..4769631 Isosphaera pallida ATCC 43644 10157417 YP_004180378.1 CDS Isop_3267 NC_014962.1 4769799 4770992 R InterPro IPR010905; KEGG: psl:Psta_0036 glycosyl hydrolase family 88; PFAM: glycosyl hydrolase family 88; SPTR: Glucuronyl hydrolase, putative; PFAM: Glycosyl Hydrolase Family 88; glycosyl hydrolase family protein complement(4769799..4770992) Isosphaera pallida ATCC 43644 10157418 YP_004180379.1 CDS Isop_3268 NC_014962.1 4771041 4771643 R COGs: COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; InterPro IPR003697; KEGG: psl:Psta_1948 maf protein; PFAM: Maf family protein; SPTR: Maf protein; TIGRFAM: maf protein; PFAM: Maf-like protein; TIGRFAM: MAF protein; maf protein complement(4771041..4771643) Isosphaera pallida ATCC 43644 10157419 YP_004180380.1 CDS Isop_3269 NC_014962.1 4771827 4773305 D COGs: COG0591 Na+/proline symporter; InterPro IPR019900: IPR001734; KEGG: rba:RB7512 putative integral membrane transport protein; PFAM: Na+/solute symporter; SPTR: Putative integral membrane transport protein; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; SSS sodium solute transporter superfamily protein 4771827..4773305 Isosphaera pallida ATCC 43644 10157420 YP_004180381.1 CDS Isop_3270 NC_014962.1 4773383 4775752 D COGs: COG3876 conserved hypothetical protein; InterPro IPR001466: IPR008302; KEGG: aba:Acid345_2615 hypothetical protein; PFAM: Uncharacterised conserved protein UCP016719; beta-lactamase; SPTR: Uncharacterised conserved protein UCP016719; PFAM: Beta-lactamase; Protein of unknown function (DUF1343); hypothetical protein 4773383..4775752 Isosphaera pallida ATCC 43644 10157421 YP_004180382.1 CDS Isop_3271 NC_014962.1 4776130 4779051 D COGs: COG0642 Signal transduction histidine kinase; InterProIPR004358: IPR000014: IPR001610: IPR003661: IPR 003594: IPR001789: IPR005467: IPR000700: IPR008207: IPR013767; KEGG: psl:Psta_1412 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; response regulator receiver; Hpt domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; response regulator receiver; SPTR: PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain; PAS fold; TIGRFAM: PAS domain S-box; multi-sensor hybrid histidine kinase 4776130..4779051 Isosphaera pallida ATCC 43644 10157422 YP_004180383.1 CDS Isop_3272 NC_014962.1 4779382 4780380 D COGs: COG1482 Phosphomannose isomerase; InterPro IPR001917: IPR001250: IPR014628; KEGG: psl:Psta_4651 mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I; PRIAM: Mannose-6-phosphate isomerase; SPTR: Mannose-6-phosphate isomerase, class I; TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: Phosphomannose isomerase type I; TIGRFAM: mannose-6-phosphate isomerase, class I; mannose-6-phosphate isomerase, type 1 4779382..4780380 Isosphaera pallida ATCC 43644 10157423 YP_004180384.1 CDS Isop_3273 NC_014962.1 4780472 4781650 D KEGG: psl:Psta_3030 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4780472..4781650 Isosphaera pallida ATCC 43644 10157424 YP_004180385.1 CDS Isop_3274 NC_014962.1 4781830 4784550 D COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterPro IPR002205: IPR006691; KEGG: srm:SRM_01676 DNA gyrase subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA gyrase/topoisomerase IV subunit A; SPTR: DNA gyrase subunit A; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; DNA topoisomerase 4781830..4784550 Isosphaera pallida ATCC 43644 10157425 YP_004180386.1 CDS Isop_3275 NC_014962.1 4784665 4786623 D COGs: COG0187 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit; InterProIPR018522: IPR001241: IPR000565: IPR003594: IPR 013506: IPR006171: IPR002288; KEGG: scl:sce4452 DNA gyrase subunit B; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain-containing protein; DNA gyrase subunit B domain protein; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; SPTR: DNA gyrase subunit B; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; DNA topoisomerase IV subunit B 4784665..4786623 Isosphaera pallida ATCC 43644 10157426 YP_004180387.1 CDS Isop_3276 NC_014962.1 4787004 4788266 R InterPro IPR018247; KEGG: mmy:MSC_0523 hypothetical protein; SPTR: Conserved hypothetical transmembrane protein; hypothetical protein complement(4787004..4788266) Isosphaera pallida ATCC 43644 10157427 YP_004180388.1 CDS Isop_3277 NC_014962.1 4788351 4790138 R KEGG: nha:Nham_2630 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2029); hypothetical protein complement(4788351..4790138) Isosphaera pallida ATCC 43644 10157428 YP_004180389.1 CDS Isop_3278 NC_014962.1 4791074 4792177 R COGs: COG1398 Fatty-acid desaturase; InterPro IPR015876: IPR005804; KEGG: tel:tll1719 acyl-CoA desaturase 2; PFAM: fatty acid desaturase; PRIAM: Stearoyl-CoA 9-desaturase; SPTR: Acyl-CoA desaturase 2; PFAM: Fatty acid desaturase; Delta-9 acyl-phospholipid desaturase complement(4791074..4792177) Isosphaera pallida ATCC 43644 10157429 YP_004180390.1 CDS Isop_3279 NC_014962.1 4792583 4793545 D COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase; InterPro IPR013154: IPR001327; KEGG: chl:Chy400_0036 alcohol dehydrogenase GroES domain protein; PFAM: Alcohol dehydrogenase GroES domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Alcohol dehydrogenase GroES domain protein; PFAM: Alcohol dehydrogenase GroES-like domain; alcohol dehydrogenase GroES domain-containing protein 4792583..4793545 Isosphaera pallida ATCC 43644 10157430 YP_004180391.1 CDS Isop_3280 NC_014962.1 4793750 4795108 R COGs: COG0673 dehydrogenase and related protein; InterPro IPR017909: IPR000683; KEGG: zpr:ZPR_3683 putative dehydrogenase and relate protein; PFAM: oxidoreductase domain protein; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase domain-containing protein complement(4793750..4795108) Isosphaera pallida ATCC 43644 10157431 YP_004180392.1 CDS Isop_3281 NC_014962.1 4795297 4795761 R InterPro IPR012577; KEGG: psl:Psta_4030 NIPSNAP family containing protein; PFAM: NIPSNAP family containing protein; SPTR: NIPSNAP family containing protein; PFAM: NIPSNAP; NIPSNAP family containing protein complement(4795297..4795761) Isosphaera pallida ATCC 43644 10157432 YP_004180393.1 CDS Isop_3282 NC_014962.1 4795879 4799439 R COGs: COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system; InterPro IPR012393: IPR005151: IPR011659; KEGG: hoh:Hoch_5294 peptidase S41; PFAM: peptidase S41; WD40-like beta Propeller containing protein; SMART: peptidase S41; SPTR: Peptidase S41; PFAM: WD40-like Beta Propeller Repeat; Peptidase family S41; peptidase S41 complement(4795879..4799439) Isosphaera pallida ATCC 43644 10157433 YP_004180394.1 CDS Isop_3283 NC_014962.1 4799738 4804171 D COGs: COG0642 Signal transduction histidine kinase; InterProIPR004358: IPR003661: IPR003594: IPR001789: IPR 005467: IPR011110; KEGG: cya:CYA_1657 sensory box histidine kinase/response regulator; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Two component regulator propeller; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SPTR: Sensory box histidine kinase/response regulator; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; histidine kinase 4799738..4804171 Isosphaera pallida ATCC 43644 10157434 YP_004180395.1 CDS Isop_3284 NC_014962.1 4804276 4805958 R KEGG: psl:Psta_2331 MFS transporter xanthine/uracil permease; SPTR: MFS transporter xanthine/uracil permease; MFS transporter xanthine/uracil permease complement(4804276..4805958) Isosphaera pallida ATCC 43644 10157435 YP_004180396.1 CDS Isop_3285 NC_014962.1 4806467 4806949 D KEGG: cat:CA2559_03365 glutamyl-tRNA synthetase; SPTR: Putative uncharacterized protein; hypothetical protein 4806467..4806949 Isosphaera pallida ATCC 43644 10157436 YP_004180397.1 CDS Isop_3286 NC_014962.1 4807205 4808083 D COGs: COG0095 Lipoate-protein ligase A; InterPro IPR004143; KEGG: plm:Plim_2611 biotin/lipoate A/B protein ligase; PFAM: biotin/lipoate A/B protein ligase; SPTR: Probable lipoate-protein ligase A-like protein; PFAM: Biotin/lipoate A/B protein ligase family; biotin/lipoate A/B protein ligase 4807205..4808083 Isosphaera pallida ATCC 43644 10157437 YP_004180398.1 CDS Isop_3287 NC_014962.1 4808139 4809080 R KEGG: psl:Psta_4143 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4808139..4809080) Isosphaera pallida ATCC 43644 10157438 YP_004180399.1 CDS Isop_3288 NC_014962.1 4809470 4810540 D COGs: COG0697 Permease of the drug/metabolite transporter (DMT) superfamily; InterPro IPR000620; KEGG: psl:Psta_0081 protein of unknown function DUF6 transmembrane; PFAM: protein of unknown function DUF6 transmembrane; SPTR: Putative uncharacterized protein; PFAM: EamA-like transporter family; hypothetical protein 4809470..4810540 Isosphaera pallida ATCC 43644 10157439 YP_004180400.1 CDS Isop_3289 NC_014962.1 4810576 4811829 R InterPro IPR011637; KEGG: rba:RB7151 hypothetical protein; PFAM: DoxX family protein; SPTR: Putative uncharacterized protein; PFAM: DoxX; DoxX family protein complement(4810576..4811829) Isosphaera pallida ATCC 43644 10157440 YP_004180401.1 CDS Isop_3290 NC_014962.1 4811916 4812734 R COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000639: IPR000073; KEGG: ttr:Tter_0115 alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(4811916..4812734) Isosphaera pallida ATCC 43644 10157441 YP_004180402.1 CDS Isop_3291 NC_014962.1 4813427 4813972 R COGs: COG1945 conserved hypothetical protein; InterPro IPR002724; KEGG: aca:ACP_1744 pyruvoyl-dependent arginine decarboxylase; PFAM: Pyruvoyl-dependent arginine decarboxylase; PRIAM: Arginine decarboxylase; SPTR: Arginine decarboxylase, pyruvoyl-dependent; TIGRFAM: arginine decarboxylase, pyruvoyl-dependent; PFAM: Pyruvoyl-dependent arginine decarboxylase (PvlArgDC); TIGRFAM: arginine decarboxylase, pyruvoyl-dependent; arginine decarboxylase complement(4813427..4813972) Isosphaera pallida ATCC 43644 10157443 YP_004180403.1 CDS Isop_3292 NC_014962.1 4814322 4814645 D KEGG: psl:Psta_4708 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4814322..4814645 Isosphaera pallida ATCC 43644 10157444 YP_004180404.1 CDS Isop_3293 NC_014962.1 4815103 4818000 R COGs: COG0514 Superfamily II DNA helicase; InterProIPR018329: IPR014001: IPR001650: IPR014021: IPR 011545: IPR018982; KEGG: psl:Psta_2965 ATP-dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; RQC domain; SMART: DEAD-like helicase; helicase domain protein; SPTR: ATP-dependent DNA helicase, RecQ family; TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: Helicase conserved C-terminal domain; RQC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family; RecQ familyATP-dependent DNA helicase complement(4815103..4818000) Isosphaera pallida ATCC 43644 10157445 YP_004180405.1 CDS Isop_3294 NC_014962.1 4818413 4819345 D COGs: COG0863 DNA modification methylase; InterPro IPR002052: IPR002295: IPR002941; KEGG: rrs:RoseRS_0124 site-specific DNA-methyltransferase (adenine-specific); PFAM: DNA methylase N-4/N-6 domain protein; SPTR: Site-specific DNA-methyltransferase (Adenine-specific); PFAM: DNA methylase; DNA methylase N-4/N-6 domain-containing protein 4818413..4819345 Isosphaera pallida ATCC 43644 10157446 YP_004180406.1 CDS Isop_3295 NC_014962.1 4819661 4821340 D COGs: COG0415 Deoxyribodipyrimidine photolyase; InterPro IPR018394: IPR002081: IPR005101; KEGG: chl:Chy400_0772 deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase FAD-binding; SPTR: Deoxyribodipyrimidine photo-lyase; PFAM: FAD binding domain of DNA photolyase; DNA photolyase; DNA photolyase FAD-binding protein 4819661..4821340 Isosphaera pallida ATCC 43644 10157447 YP_004180407.1 CDS Isop_3296 NC_014962.1 4821643 4822635 D InterPro IPR013424; KEGG: aga:AgaP_AGAP003607 AGAP003607-PA; SPTR: AGAP003607-PA; PFAM: FG-GAP repeat; hypothetical protein 4821643..4822635 Isosphaera pallida ATCC 43644 10157448 YP_004180408.1 CDS Isop_3297 NC_014962.1 4822782 4825760 R InterPro IPR000834; KEGG: sus:Acid_1533 peptidase M14, carboxypeptidase A; PFAM: peptidase M14 carboxypeptidase A; SPTR: Peptidase M14, carboxypeptidase A; PFAM: Zinc carboxypeptidase; peptidase M14 carboxypeptidase A complement(4822782..4825760) Isosphaera pallida ATCC 43644 10157449 YP_004180409.1 CDS Isop_3298 NC_014962.1 4825794 4826033 R KEGG: aag:AaeL_AAEL003359 dual specificity mitogen-activated protein kinase kinase hemipterous MAPKK; SPTR: Dual specificity mitogen-activated protein kinase kinase hemipterous MAPKK; dual specificity mitogen-activated protein kinase complement(4825794..4826033) Isosphaera pallida ATCC 43644 10157450 YP_004180410.1 CDS Isop_3299 NC_014962.1 4826432 4827466 D COGs: COG0805 Sec-independent protein secretion pathway component TatC; InterPro IPR019822: IPR002033; KEGG: plm:Plim_2680 sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; SPTR: Sec-independent protein translocase, TatC subunit; TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent protein translocase protein (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC; Sec-independent protein translocase subunit TatC 4826432..4827466 Isosphaera pallida ATCC 43644 10157451 YP_004180411.1 CDS Isop_3300 NC_014962.1 4827479 4829071 D COGs: COG0007 Uroporphyrinogen-III methylase; InterPro IPR003043: IPR006366: IPR000878: IPR003754; KEGG: gme:Gmet_3235 uroporphyrinogen-III synthase/uroporphyrinogen-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; SPTR: Uroporphyrin-III C-methyltransferase; TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; Uroporphyrinogen-III synthase HemD; TIGRFAM: uroporphyrin-III C-methyltransferase; uroporphyrin-III C-methyltransferase 4827479..4829071 Isosphaera pallida ATCC 43644 10157452 YP_004180412.1 CDS Isop_3301 NC_014962.1 4829082 4830056 R COGs: COG2503 secreted acid phosphatase; InterPro IPR005519; KEGG: nde:NIDE2215 putative acid phosphatase, class B; PFAM: acid phosphatase (Class B); SPTR: Acid phosphatase; PFAM: HAD superfamily, subfamily IIIB (Acid phosphatase); TIGRFAM: 5'-nucleotidase, lipoprotein e(P4) family; acid phosphatase (Class B) complement(4829082..4830056) Isosphaera pallida ATCC 43644 10157453 YP_004180413.1 CDS Isop_3302 NC_014962.1 4830145 4831152 R COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: plm:Plim_0780 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Sugar ABC transporter permease protein; PFAM: Branched-chain amino acid transport system / permease component; monosaccharide ABC transporter membrane protein complement(4830145..4831152) Isosphaera pallida ATCC 43644 10157454 YP_004180414.1 CDS Isop_3303 NC_014962.1 4831250 4832914 R COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR017871: IPR003593: IPR003439: IPR015861; KEGG: scl:sce4029 ribose ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Sugar (D-ribose) ABC transporter, ATP-binding protein; PFAM: ABC transporter; monosaccharide ABC transporter ATP-binding protein complement(4831250..4832914) Isosphaera pallida ATCC 43644 10157455 YP_004180415.1 CDS Isop_3304 NC_014962.1 4832911 4834059 R COGs: COG1879 ABC-type sugar transport system periplasmic component; KEGG: plm:Plim_0778 ribose ABC transporter periplasmic-binding protein; SPTR: ABC transporter sugar-binding protein; monosaccharide ABC transporter substrate-binding protein complement(4832911..4834059) Isosphaera pallida ATCC 43644 10157456 YP_004180416.1 CDS Isop_3305 NC_014962.1 4834276 4835226 R InterPro IPR006342; KEGG: rba:RB2498 putative methyltransferase; SPTR: Putative uncharacterized protein; TIGRFAM: methyltransferase FkbM family; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: methyltransferase, FkbM family; FkbM family methyltransferase complement(4834276..4835226) Isosphaera pallida ATCC 43644 10157457 YP_004180417.1 CDS Isop_3306 NC_014962.1 4835294 4836598 R COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: hha:Hhal_1513 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase complement(4835294..4836598) Isosphaera pallida ATCC 43644 10157458 YP_004180418.1 CDS Isop_3307 NC_014962.1 4836816 4838009 D COGs: COG1446 Asparaginase; InterPro IPR006311: IPR017909: IPR000246; KEGG: srm:SRM_02869 asparaginase; PFAM: peptidase T2 asparaginase 2; PRIAM:N(4)-(beta-N-acetylglucosaminyl)-L-asparagina se; SPTR: Asparaginase; PFAM: Asparaginase; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase 4836816..4838009 Isosphaera pallida ATCC 43644 10157459 YP_004180419.1 CDS Isop_3308 NC_014962.1 4838452 4839333 D InterPro IPR004155: IPR000357; KEGG: psl:Psta_2942 PBS lyase heat domain protein repeat-containing protein; PFAM: HEAT domain containing protein; SPTR: PBS lyase HEAT domain protein repeat-containing protein; PFAM: HEAT repeat; HEAT domain-containing protein 4838452..4839333 Isosphaera pallida ATCC 43644 10157460 YP_004180420.1 CDS Isop_3309 NC_014962.1 4839515 4841626 D COGs: COG1193 Mismatch repair ATPase (MutS family); InterPro IPR000432: IPR005747: IPR007696; KEGG: cag:Cagg_1710 MutS2 family protein; PFAM: DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; SPTR: MutS2 protein; PFAM: MutS domain V; TIGRFAM: MutS2 family protein; DNA mismatch repair protein MutS domain-containing protein 4839515..4841626 Isosphaera pallida ATCC 43644 10157461 YP_004180421.1 CDS Isop_3310 NC_014962.1 4841602 4842777 R COGs: COG1600 Uncharacterized Fe-S protein; InterPro IPR017900: IPR017896: IPR013542; KEGG: psl:Psta_2479 domain of unknown function DUF1730; PFAM: domain of unknown function DUF1730; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF1730); TIGRFAM: iron-sulfur cluster binding protein, putative; hypothetical protein complement(4841602..4842777) Isosphaera pallida ATCC 43644 10157462 YP_004180422.1 CDS Isop_3311 NC_014962.1 4842767 4843732 R COGs: COG0685 5 10-methylenetetrahydrofolate reductase; InterPro IPR004620: IPR003171; KEGG: pca:Pcar_1732 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; PRIAM: Methylenetetrahydrofolate reductase (NAD(P)H); SPTR: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase, prokaryotic form; 5,10-methylenetetrahydrofolate reductase complement(4842767..4843732) Isosphaera pallida ATCC 43644 10157463 YP_004180423.1 CDS Isop_3312 NC_014962.1 4844174 4844890 D COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: bts:Btus_2687 transcriptional regulator, TetR family; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family; TetR family transcriptional regulator 4844174..4844890 Isosphaera pallida ATCC 43644 10157464 YP_004180424.1 CDS Isop_3313 NC_014962.1 4845221 4846204 D KEGG: fre:Franean1_5104 peptidoglycan glycosyltransferase; SPTR: Peptidoglycan glycosyltransferase; hypothetical protein 4845221..4846204 Isosphaera pallida ATCC 43644 10157465 YP_004180425.1 CDS Isop_3314 NC_014962.1 4846657 4848726 D COGs: COG0515 Serine/threonine protein kinase; InterProIPR017441: IPR020635: IPR002290: IPR000719: IPR 017442; KEGG: psl:Psta_4559 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain; serine/threonine protein kinase 4846657..4848726 Isosphaera pallida ATCC 43644 10157466 YP_004180426.1 CDS Isop_3315 NC_014962.1 4849203 4852163 D KEGG: plm:Plim_3809 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4849203..4852163 Isosphaera pallida ATCC 43644 10157467 YP_004180427.1 CDS Isop_3316 NC_014962.1 4852333 4853442 D KEGG: psl:Psta_4185 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4852333..4853442 Isosphaera pallida ATCC 43644 10157468 YP_004180428.1 CDS Isop_3317 NC_014962.1 4853530 4855089 D KEGG: rba:RB12544 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Neutral/alkaline non-lysosomal ceramidase; hypothetical protein 4853530..4855089 Isosphaera pallida ATCC 43644 10157469 YP_004180429.1 CDS Isop_3318 NC_014962.1 4855508 4856296 R InterPro IPR014284: IPR007627; KEGG: rba:RB7926 hypothetical protein; PFAM: sigma-70 region 2 domain protein; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 familyRNA polymerase sigma factor complement(4855508..4856296) Isosphaera pallida ATCC 43644 10157470 YP_004180430.1 CDS Isop_3319 NC_014962.1 4856622 4857374 D KEGG: mxa:MXAN_6434 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4856622..4857374 Isosphaera pallida ATCC 43644 10157471 YP_004180431.1 CDS Isop_3320 NC_014962.1 4857563 4858693 D COGs: COG0150 Phosphoribosylaminoimidazole (AIR) synthetase; InterPro IPR004733: IPR000728: IPR010918; KEGG: psl:Psta_2161 phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; PRIAM: Phosphoribosylformylglycinamidine cyclo-ligase; SPTR: Phosphoribosylformylglycinamidine cyclo-ligase; TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase; phosphoribosylformylglycinamidine cyclo-ligase 4857563..4858693 Isosphaera pallida ATCC 43644 10157472 YP_004180432.1 CDS Isop_3321 NC_014962.1 4858851 4859567 D KEGG: gga:768534 hypothetical protein LOC768534; SPTR: Putative uncharacterized protein; hypothetical protein 4858851..4859567 Isosphaera pallida ATCC 43644 10157473 YP_004180433.1 CDS Isop_3322 NC_014962.1 4859674 4859874 D KEGG: amu:Amuc_0243 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4859674..4859874 Isosphaera pallida ATCC 43644 10157474 YP_004180434.1 CDS Isop_3323 NC_014962.1 4860080 4861006 D InterPro IPR003689; KEGG: psl:Psta_1336 zinc/iron permease; PFAM: zinc/iron permease; SPTR: Metal cation transporter, ZIP family; PFAM: ZIP Zinc transporter; zinc/iron permease 4860080..4861006 Isosphaera pallida ATCC 43644 10157475 YP_004180435.1 CDS Isop_3324 NC_014962.1 4861164 4862291 D COGs: COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); InterPro IPR003699; KEGG: plm:Plim_1792 S-adenosylmethionine/tRNA-ribosyltransferase-isom erase; PFAM: Queuosine biosynthesis protein; SPTR: S-adenosylmethionine/tRNA-ribosyltransferase-isom erase; TIGRFAM:S-adenosylmethionine/tRNA-ribosyltransferas e-isomerase; PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; S-adenosylmethionine/tRNA-ribosyltransferase- isomerase 4861164..4862291 Isosphaera pallida ATCC 43644 10157476 YP_004180436.1 CDS Isop_3325 NC_014962.1 4862281 4869093 R COGs: COG0178 Excinuclease ATPase subunit; InterProIPR001412: IPR017871: IPR004602: IPR003593: IPR 003439; KEGG: psl:Psta_1575 excinuclease ABC, A subunit; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Excinuclease ABC, A subunit; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit; UvrA family protein complement(4862281..4869093) Isosphaera pallida ATCC 43644 10157477 YP_004180437.1 CDS Isop_3326 NC_014962.1 4869268 4870272 R InterPro IPR002035; KEGG: plm:Plim_3001 von Willebrand factor type A; SPTR: von Willebrand factor type A; PFAM: Sec23/Sec24 trunk domain; hypothetical protein complement(4869268..4870272) Isosphaera pallida ATCC 43644 10157478 YP_004180438.1 CDS Isop_3327 NC_014962.1 4870269 4871069 R KEGG: ank:AnaeK_3746 response regulator receiver protein; SPTR: Excinuclease ABC subunit A; hypothetical protein complement(4870269..4871069) Isosphaera pallida ATCC 43644 10157479 YP_004180439.1 CDS Isop_3328 NC_014962.1 4871066 4871806 R InterPro IPR003400; KEGG: mca:MCA0632 biopolymer ExbD/TolR family transporter; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport protein, ExbD/TolR family; PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR complement(4871066..4871806) Isosphaera pallida ATCC 43644 10157480 YP_004180440.1 CDS Isop_3329 NC_014962.1 4871803 4872390 R COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: plm:Plim_3761 biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport protein ExbD/TolR; PFAM: Biopolymer transport protein ExbD/TolR; biopolymer transport protein ExbD/TolR complement(4871803..4872390) Isosphaera pallida ATCC 43644 10157481 YP_004180441.1 CDS Isop_3330 NC_014962.1 4872565 4873605 R COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: plm:Plim_3807 MotA/TolQ/ExbB proton channel; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Probable tolQ protein; PFAM: MotA/TolQ/ExbB proton channel family; MotA/TolQ/ExbB proton channel complement(4872565..4873605) Isosphaera pallida ATCC 43644 10157482 YP_004180442.1 CDS Isop_3331 NC_014962.1 4873816 4874994 R COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: sus:Acid_1655 hypothetical protein; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; PFAM: Predicted permease; hypothetical protein complement(4873816..4874994) Isosphaera pallida ATCC 43644 10157483 YP_004180443.1 CDS Isop_3332 NC_014962.1 4875026 4876327 R COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: nhl:Nhal_1201 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; PFAM: Predicted permease; hypothetical protein complement(4875026..4876327) Isosphaera pallida ATCC 43644 10157484 YP_004180444.1 CDS Isop_3333 NC_014962.1 4876324 4877097 R COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: ppd:Ppro_1984 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC transporter; ABC transporter-like protein complement(4876324..4877097) Isosphaera pallida ATCC 43644 10157485 YP_004180445.1 CDS Isop_3334 NC_014962.1 4877140 4878858 R COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: geo:Geob_2354 efflux transporter, RND family, MFP subunit; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter MFP subunit complement(4877140..4878858) Isosphaera pallida ATCC 43644 10157486 YP_004180446.1 CDS Isop_3335 NC_014962.1 4879067 4880752 R COGs: COG1404 Subtilisin-like serine protease; InterPro IPR000209; KEGG: bba:Bd0029 subtilase; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; SPTR: Cna protein B-type domain; PFAM: Subtilase family; peptidase S8 and S53 subtilisin kexin sedolisin complement(4879067..4880752) Isosphaera pallida ATCC 43644 10157487 YP_004180447.1 CDS Isop_3336 NC_014962.1 4881214 4882281 R InterPro IPR012902: IPR018062: IPR001120; KEGG: plm:Plim_0377 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein complement(4881214..4882281) Isosphaera pallida ATCC 43644 10157488 YP_004180448.1 CDS Isop_3337 NC_014962.1 4882500 4882739 R KEGG: scb:SCAB_89231 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4882500..4882739) Isosphaera pallida ATCC 43644 10157489 YP_004180449.1 CDS Isop_3338 NC_014962.1 4883279 4884403 D KEGG: tva:TVAG_449290 trichohyalin; SPTR: Trichohyalin, putative; hypothetical protein 4883279..4884403 Isosphaera pallida ATCC 43644 10157490 YP_004180450.1 CDS Isop_3339 NC_014962.1 4884556 4886580 D COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; InterPro IPR017798: IPR000581: IPR020558; KEGG: psl:Psta_2493 dehydratase, YjhG/YagF family; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; PRIAM: Dihydroxy-acid dehydratase; SPTR: Dehydratase, YjhG/YagF family; TIGRFAM: dehydratase, YjhG/YagF family; PFAM: Dehydratase family; TIGRFAM: probable dehydratase, YjhG/YagF family; dehydratase, YjhG/YagF family 4884556..4886580 Isosphaera pallida ATCC 43644 10157491 YP_004180451.1 CDS Isop_3340 NC_014962.1 4886590 4887741 D COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: rba:RB10858 oxidoreductase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; PFAM: NAD dependent epimerase/dehydratase family; NAD-dependent epimerase/dehydratase 4886590..4887741 Isosphaera pallida ATCC 43644 10157492 YP_004180452.1 CDS Isop_3341 NC_014962.1 4887827 4889896 R COGs: COG0501 Zn-dependent protease with chaperone function; InterPro IPR001915; KEGG: bge:BC1002_5469 peptidase M48 Ste24p; PFAM: peptidase M48 Ste24p; SPTR: Peptidase M48 Ste24p; PFAM: Peptidase family M48; peptidase M48 Ste24p complement(4887827..4889896) Isosphaera pallida ATCC 43644 10157493 YP_004180453.1 CDS Isop_3342 NC_014962.1 4890188 4890787 R COGs: COG1704 conserved hypothetical protein; InterPro IPR007156; KEGG: dol:Dole_1528 LemA family protein; PFAM: LemA family protein; SPTR: LemA family protein; PFAM: LemA family; LemA family protein complement(4890188..4890787) Isosphaera pallida ATCC 43644 10157494 YP_004180454.1 CDS Isop_3343 NC_014962.1 4891047 4892699 R COGs: COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein); InterPro IPR000515: IPR007210; KEGG: cse:Cseg_3334 glycine betaine ABC transporter substrate-binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; binding-protein-dependent transport systems inner membrane component; SPTR: Substrate-binding region of ABC-type glycine betaine transport system; PFAM: Binding-protein-dependent transport system inner membrane component; Substrate binding domain of ABC-type glycine betaine transport system; glycine betaine ABC transporter substrate-binding protein complement(4891047..4892699) Isosphaera pallida ATCC 43644 10157495 YP_004180455.1 CDS Isop_3344 NC_014962.1 4892704 4893594 R COGs: COG1125 ABC-type proline/glycine betaine transport systems ATPase components; InterPro IPR003439: IPR017871: IPR003593; KEGG: hoh:Hoch_5204 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter; ABC transporter-like protein complement(4892704..4893594) Isosphaera pallida ATCC 43644 10157496 YP_004180456.1 CDS Isop_3345 NC_014962.1 4893813 4894841 D InterPro IPR004155; KEGG: rrs:RoseRS_1736 heat repeat-containing PBS lyase; PFAM: PBS lyase HEAT domain protein repeat-containing protein; SPTR: PBS lyase HEAT domain protein repeat-containing protein; PBS lyase HEAT domain-containing protein 4893813..4894841 Isosphaera pallida ATCC 43644 10157497 YP_004180457.1 CDS Isop_3346 NC_014962.1 4894847 4898182 R COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR004764: IPR001036; KEGG: psl:Psta_2288 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; SPTR: Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(4894847..4898182) Isosphaera pallida ATCC 43644 10157498 YP_004180458.1 CDS Isop_3347 NC_014962.1 4898330 4899691 R COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: mca:MCA1596 HlyD family multidrug efflux protein; PFAM: secretion protein HlyD family protein; SPTR: Acriflavine resistance protein A (Precursor); TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter MFP subunit complement(4898330..4899691) Isosphaera pallida ATCC 43644 10157499 YP_004180459.1 CDS Isop_3348 NC_014962.1 4899795 4899995 D hypothetical protein 4899795..4899995 Isosphaera pallida ATCC 43644 10157500 YP_004180460.1 CDS Isop_3349 NC_014962.1 4900095 4905254 D InterPro IPR006626; KEGG: hau:Haur_4998 Na-Ca exchanger/integrin-beta4; SPTR: Integrin alpha chain; hypothetical protein 4900095..4905254 Isosphaera pallida ATCC 43644 10157501 YP_004180461.1 CDS Isop_3350 NC_014962.1 4905552 4907063 D COGs: COG1797 Cobyrinic acid a c-diamide synthase; InterPro IPR017929: IPR011698; KEGG: psl:Psta_3042 CobB/CobQ domain protein glutamine amidotransferase; PFAM: CobB/CobQ domain protein glutamine amidotransferase; SPTR: CobB/CobQ domain protein glutamine amidotransferase; PFAM: CobB/CobQ-like glutamine amidotransferase domain; CobB/CobQ domain-containing protein glutamine amidotransferase 4905552..4907063 Isosphaera pallida ATCC 43644 10157502 YP_004180462.1 CDS Isop_3351 NC_014962.1 4907208 4908059 D KEGG: psl:Psta_2105 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4907208..4908059 Isosphaera pallida ATCC 43644 10157503 YP_004180463.1 CDS Isop_3352 NC_014962.1 4908161 4909672 R COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017442: IPR017441: IPR008271: IPR 020635: IPR002290; KEGG: psl:Psta_4044 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Probable serine/threonine protein kinase; PFAM: Protein kinase domain; serine/threonine protein kinase complement(4908161..4909672) Isosphaera pallida ATCC 43644 10157504 YP_004180464.1 CDS Isop_3353 NC_014962.1 4909773 4910915 R COGs: COG0505 Carbamoylphosphate synthase small subunit; InterProIPR006274: IPR017926: IPR002474: IPR000991: IPR 001317: IPR011702; KEGG: psl:Psta_4606 carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I; SPTR: Carbamoyl-phosphate synthase, small chain; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit; carbamoyl-phosphate synthase small subunit complement(4909773..4910915) Isosphaera pallida ATCC 43644 10157505 YP_004180465.1 CDS Isop_3354 NC_014962.1 4911267 4912640 R COGs: COG0673 dehydrogenase and related protein; InterPro IPR006311: IPR017909: IPR000683; KEGG: sli:Slin_6215 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; SPTR: Probable NADH-dependent dehydrogenase; PFAM: Oxidoreductase family, C-terminal alpha/beta domain; Oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase domain-containing protein complement(4911267..4912640) Isosphaera pallida ATCC 43644 10157506 YP_004180466.1 CDS Isop_3355 NC_014962.1 4913005 4914765 R KEGG: amr:AM1_0645 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4913005..4914765) Isosphaera pallida ATCC 43644 10157507 YP_004180467.1 CDS Isop_3356 NC_014962.1 4915072 4918971 R InterPro IPR019734: IPR013026: IPR011519; KEGG: ote:Oter_2945 TPR repeat-containing protein; PFAM: ASPIC/UnbV domain protein; SPTR: TPR repeat-containing protein; PFAM: ASPIC and UnbV; ASPIC/UnbV domain-containing protein complement(4915072..4918971) Isosphaera pallida ATCC 43644 10157508 YP_004180468.1 CDS Isop_3357 NC_014962.1 4919463 4920440 R COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: ote:Oter_2944 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Carbon-nitrogen hydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(4919463..4920440) Isosphaera pallida ATCC 43644 10157509 YP_004180469.1 CDS Isop_3358 NC_014962.1 4920595 4921218 R InterPro IPR013026; KEGG: rca:Rcas_0215 TPR repeat-containing protein; SPTR: Tetratricopeptide TPR_2 repeat protein; hypothetical protein complement(4920595..4921218) Isosphaera pallida ATCC 43644 10157510 YP_004180470.1 CDS Isop_3359 NC_014962.1 4921237 4922895 R COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017442: IPR017441: IPR008271: IPR 020635: IPR002290; KEGG: plm:Plim_2182 serine/threonine protein kinase-related protein; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Probable serine/threonine-protein kinase pknB; PFAM: Protein kinase domain; serine/threonine protein kinase complement(4921237..4922895) Isosphaera pallida ATCC 43644 10157511 YP_004180471.1 CDS Isop_3360 NC_014962.1 4923330 4924151 R COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198: IPR002347: IPR020904; KEGG: dfe:Dfer_4758 3-ketoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Short-chain dehydrogenase/reductase SDR; PFAM: short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(4923330..4924151) Isosphaera pallida ATCC 43644 10157512 YP_004180472.1 CDS Isop_3361 NC_014962.1 4924820 4925152 R KEGG: pfr:PFREUD_16470 3-demethylubiquinone-9 3-O-methyltransferase; SPTR: Putative uncharacterized protein; hypothetical protein complement(4924820..4925152) Isosphaera pallida ATCC 43644 10157515 YP_004180473.1 CDS Isop_3363 NC_014962.1 4925981 4927933 R COGs: COG0433 ATPase; InterPro IPR003593; KEGG: sat:SYN_01844 putative cytoplasmic protein; SMART: AAA ATPase; SPTR: Hypothetical cytosolic protein; PFAM: Domain of unknown function DUF87; AAA ATPase complement(4925981..4927933) Isosphaera pallida ATCC 43644 10157517 YP_004180474.1 CDS Isop_3364 NC_014962.1 4927936 4929057 R InterPro IPR018977; KEGG: sat:SYN_01845 putative cytoplasmic protein; PFAM: NurA domain; SPTR: Hypothetical cytosolic protein; PFAM: NurA domain; NurA domain-containing protein complement(4927936..4929057) Isosphaera pallida ATCC 43644 10157518 YP_004180475.1 CDS Isop_3365 NC_014962.1 4929084 4930283 R KEGG: pth:PTH_0156 hypothetical protein; SPTR: Hypothetical membrane protein; hypothetical protein complement(4929084..4930283) Isosphaera pallida ATCC 43644 10157519 YP_004180476.1 CDS Isop_3366 NC_014962.1 4930368 4930715 R KEGG: scl:sce1944 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4930368..4930715) Isosphaera pallida ATCC 43644 10157520 YP_004180477.1 CDS Isop_3367 NC_014962.1 4931045 4931149 R hypothetical protein complement(4931045..4931149) Isosphaera pallida ATCC 43644 10157521 YP_004180478.1 CDS Isop_3368 NC_014962.1 4931171 4932094 R COGs: COG1715 Restriction endonuclease; InterPro IPR007560; KEGG: bts:Btus_1743 restriction endonuclease; PFAM: restriction endonuclease; SPTR: Restriction endonuclease; PFAM: Restriction endonuclease; restriction endonuclease complement(4931171..4932094) Isosphaera pallida ATCC 43644 10157522 YP_004180479.1 CDS Isop_3370 NC_014962.1 4932281 4933750 R KEGG: rba:RB940 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4932281..4933750) Isosphaera pallida ATCC 43644 10157524 YP_004180480.1 CDS Isop_3371 NC_014962.1 4934004 4936883 R COGs: COG1483 ATPase (AAA+ superfamily); KEGG: sme:SMc02155 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF499); hypothetical protein complement(4934004..4936883) Isosphaera pallida ATCC 43644 10157525 YP_004180481.1 CDS Isop_3372 NC_014962.1 4936895 4937275 R KEGG: mar:MAE_40430 hypothetical protein; SPTR: Genome sequencing data, contig C279; PFAM: Protein of unknown function DUF82; hypothetical protein complement(4936895..4937275) Isosphaera pallida ATCC 43644 10157526 YP_004180482.1 CDS Isop_3373 NC_014962.1 4937277 4937507 R COGs: COG2442 conserved hypothetical protein; InterPro IPR007367; KEGG: cyc:PCC7424_3561 protein of unknown function DUF433; PFAM: protein of unknown function DUF433; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF433); hypothetical protein complement(4937277..4937507) Isosphaera pallida ATCC 43644 10157527 YP_004180483.1 CDS Isop_3374 NC_014962.1 4937504 4941385 R COGs: COG1743 Adenine-specific DNA methylase containing a Zn-ribbon; InterPro IPR009537: IPR012327; KEGG: sme:SMc02154 hypothetical protein; PFAM: protein of unknown function DUF1156; D12 class N6 adenine-specific DNA methyltransferase; SPTR: Putative uncharacterized protein; PFAM: D12 class N6 adenine-specific DNA methyltransferase; Transposase IS200 like; Protein of unknown function (DUF1156); hypothetical protein complement(4937504..4941385) Isosphaera pallida ATCC 43644 10157528 YP_004180484.1 CDS Isop_3375 NC_014962.1 4941382 4944882 R COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family; InterPro IPR014021: IPR001650: IPR000330: IPR014001; KEGG: sme:SMc02152 putative helicase protein; PFAM: helicase domain protein; SNF2-related protein; SMART: helicase domain protein; DEAD-like helicase; SPTR: Helicase-DNA-binding protein; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain; helicase domain-containing protein complement(4941382..4944882) Isosphaera pallida ATCC 43644 10157529 YP_004180485.1 CDS Isop_3376 NC_014962.1 4945303 4948542 R InterPro IPR006935: IPR014001; KEGG: aeh:Mlg_1542 DEAD/DEAH box helicase domain-containing protein; PFAM: type III restriction protein res subunit; SMART: DEAD-like helicase; SPTR: DEAD/DEAH box helicase domain protein; PFAM: Type III restriction enzyme, res subunit; type III restriction protein res subunit complement(4945303..4948542) Isosphaera pallida ATCC 43644 10157530 YP_004180486.1 CDS Isop_3377 NC_014962.1 4948542 4951778 R COGs: COG2189 Adenine specific DNA methylase Mod; InterPro IPR002941: IPR002295: IPR002052: IPR016059; KEGG: aeh:Mlg_1539 DNA methylase N-4/N-6 domain-containing protein; PFAM: DNA methylase N-4/N-6 domain protein; SPTR: DNA methylase N-4/N-6 domain protein; PFAM: DNA methylase; DNA methylase N-4/N-6 domain-containing protein complement(4948542..4951778) Isosphaera pallida ATCC 43644 10157531 YP_004180487.1 CDS Isop_3379 NC_014962.1 4952246 4955113 R COGs: COG0553 Superfamily II DNA/RNA helicase SNF2 family; InterPro IPR014021: IPR001650: IPR000330: IPR014001; KEGG: aeh:Mlg_1538 helicase domain-containing protein; PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: Helicase domain protein; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain; SNF2-like protein complement(4952246..4955113) Isosphaera pallida ATCC 43644 10157533 YP_004180488.1 CDS Isop_3380 NC_014962.1 4955688 4956395 D InterPro IPR014284: IPR007627; KEGG: zpr:ZPR_2352 RNA polymerase ECF-type sigma factor; PFAM: sigma-70 region 2 domain protein; SPTR: RNA polymerase sigma factor/ECF subfamily (Sigma-70); TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; sigma-70 familyRNA polymerase sigma factor 4955688..4956395 Isosphaera pallida ATCC 43644 10157534 YP_004180489.1 CDS Isop_3381 NC_014962.1 4956602 4956841 D COGs: COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing); InterPro IPR003751; KEGG: psl:Psta_2445 carbon storage regulator, CsrA; PFAM: carbon storage regulator; SPTR: Probable carbon storage regulator; TIGRFAM: carbon storage regulator; PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA); carbon storage regulator CsrA 4956602..4956841 Isosphaera pallida ATCC 43644 10157535 YP_004180490.1 CDS Isop_3382 NC_014962.1 4956897 4957460 R COGs: COG0693 Putative intracellular protease/amidase; InterPro IPR006286: IPR002818; KEGG: scb:SCAB_55411 putative ThiJ/PfpI family protein; PFAM: ThiJ/PfpI domain-containing protein; SPTR: Protease; TIGRFAM: intracellular protease, PfpI family; PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease, PfpI family; PfpI familyintracellular protease complement(4956897..4957460) Isosphaera pallida ATCC 43644 10157536 YP_004180491.1 CDS Isop_3383 NC_014962.1 4957919 4960774 D COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterProIPR003439: IPR017940: IPR001140: IPR017871: IPR 003593; KEGG: bpt:Bpet1862 putative ABC transporter; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: Putative ABC transporter; PFAM: ABC transporter transmembrane region; ABC transporter; Domain of unknown function (DUF1854); ABC transporter-like protein 4957919..4960774 Isosphaera pallida ATCC 43644 10157537 YP_004180492.1 CDS Isop_3384 NC_014962.1 4960984 4961226 R KEGG: aae:aq_1182 flagellar M-ring protein; SPTR: Flagellar M-ring protein; hypothetical protein complement(4960984..4961226) Isosphaera pallida ATCC 43644 10157538 YP_004180493.1 CDS Isop_3385 NC_014962.1 4961411 4962445 R COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017442: IPR008271: IPR020635: IPR 002290; KEGG: psl:Psta_0094 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain; serine/threonine protein kinase complement(4961411..4962445) Isosphaera pallida ATCC 43644 10157539 YP_004180494.1 CDS Isop_3386 NC_014962.1 4962641 4963852 R COGs: COG0631 Serine/threonine protein phosphatase; InterPro IPR014045: IPR001932; KEGG: plm:Plim_2397 phosphoprotein phosphatase; PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; SPTR: Protein phosphatase; PFAM: Protein phosphatase 2C; protein serine/threonine phosphatase complement(4962641..4963852) Isosphaera pallida ATCC 43644 10157540 YP_004180495.1 CDS Isop_3387 NC_014962.1 4964099 4964866 D COGs: COG0456 Acetyltransferase; InterPro IPR000182; KEGG: plm:Plim_1970 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; N-acetyltransferase GCN5 4964099..4964866 Isosphaera pallida ATCC 43644 10157541 YP_004180496.1 CDS Isop_3388 NC_014962.1 4964863 4966191 D COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765: IPR007863; KEGG: psl:Psta_1688 peptidase M16 domain protein; PFAM: peptidase M16 domain protein; PRIAM: processing peptidase; SPTR: Hypothetical zinc protease; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); processing peptidase 4964863..4966191 Isosphaera pallida ATCC 43644 10157542 YP_004180497.1 CDS Isop_3389 NC_014962.1 4966199 4967497 D COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765: IPR007863: IPR001431; KEGG: psl:Psta_0353 peptidase M16 domain protein; PFAM: peptidase M16 domain protein; SPTR: Peptidase M16 domain protein; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); peptidase M16 domain-containing protein 4966199..4967497 Isosphaera pallida ATCC 43644 10157543 YP_004180498.1 CDS Isop_3390 NC_014962.1 4967852 4974553 R COGs: COG2931 RTX toxins and related Ca2+-binding protein; InterPro IPR001343: IPR018512: IPR018511; KEGG: swp:swp_1383 hemolysin-type calcium-binding region; PFAM: Hemolysin-type calcium-binding region; SPTR: Type I secretion target repeat protein; PFAM: Hemolysin-type calcium-binding repeat (2 copies); hemolysin-type calcium-binding protein complement(4967852..4974553) Isosphaera pallida ATCC 43644 10157544 YP_004180499.1 CDS Isop_3391 NC_014962.1 4975311 4976618 D KEGG: mka:MK0690 SMC1-family ATPase; SPTR: DNA double-strand break repair rad50 ATPase; hypothetical protein 4975311..4976618 Isosphaera pallida ATCC 43644 10157545 YP_004180500.1 CDS Isop_3392 NC_014962.1 4976758 4978698 D KEGG: mba:Mbar_A3153 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4976758..4978698 Isosphaera pallida ATCC 43644 10157546 YP_004180501.1 CDS Isop_3393 NC_014962.1 4979121 4980203 D InterPro IPR012902: IPR001120; KEGG: plm:Plim_1302 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 4979121..4980203 Isosphaera pallida ATCC 43644 10157547 YP_004180502.1 CDS Isop_3394 NC_014962.1 4980434 4980697 D InterPro IPR005829; KEGG: HOXD3; homeobox D3; SPTR: Homeobox protein Hox-D3; hypothetical protein 4980434..4980697 Isosphaera pallida ATCC 43644 10157548 YP_004180503.1 CDS Isop_3395 NC_014962.1 4981121 4982200 D InterPro IPR012902: IPR001120; KEGG: psl:Psta_0327 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 4981121..4982200 Isosphaera pallida ATCC 43644 10157549 YP_004180504.1 CDS Isop_3396 NC_014962.1 4982457 4982663 D KEGG: scb:SCAB_27131 putative membrane-associated oxidoreductase; SPTR: Putative membrane-associated oxidoreductase; putative membrane-associated oxidoreductase 4982457..4982663 Isosphaera pallida ATCC 43644 10157550 YP_004180505.1 CDS Isop_3397 NC_014962.1 4982861 4984453 D KEGG: hha:Hhal_0926 carbohydrate kinase, FGGY; SPTR: Cell division-related protein; hypothetical protein 4982861..4984453 Isosphaera pallida ATCC 43644 10157551 YP_004180506.1 CDS Isop_3398 NC_014962.1 4984685 4985572 D COGs: COG0812 UDP-N-acetylmuramate dehydrogenase; InterPro IPR003170: IPR016166: IPR006094: IPR011601; KEGG: plm:Plim_0011 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase domain-containing protein; PRIAM: UDP-N-acetylmuramate dehydrogenase; SPTR: UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; UDP-N-acetylenolpyruvoylglucosamine reductase 4984685..4985572 Isosphaera pallida ATCC 43644 10157552 YP_004180507.1 CDS Isop_3399 NC_014962.1 4986178 4987173 D KEGG: psl:Psta_2947 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4986178..4987173 Isosphaera pallida ATCC 43644 10157553 YP_004180508.1 CDS Isop_3400 NC_014962.1 4987514 4988248 D KEGG: mxa:MXAN_6434 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 4987514..4988248 Isosphaera pallida ATCC 43644 10157554 YP_004180509.1 CDS Isop_3401 NC_014962.1 4988377 4989045 D COGs: COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; InterPro IPR000887; KEGG: psl:Psta_4168 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; SPTR: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase; 2-keto-3-deoxy-phosphogluconate aldolase 4988377..4989045 Isosphaera pallida ATCC 43644 10157555 YP_004180510.1 CDS Isop_3402 NC_014962.1 4989123 4990223 R COGs: COG2006 conserved hypothetical protein; InterPro IPR006311: IPR017909; KEGG: dma:DMR_13230 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF362); TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; hypothetical protein complement(4989123..4990223) Isosphaera pallida ATCC 43644 10157556 YP_004180511.1 CDS Isop_3403 NC_014962.1 4990220 4991227 R InterPro IPR020904; KEGG: psl:Psta_0506 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4990220..4991227) Isosphaera pallida ATCC 43644 10157557 YP_004180512.1 CDS Isop_3404 NC_014962.1 4991694 4996280 R InterPro IPR018247; KEGG: hwa:HQ1193A cell surface glycoprotein; SPTR: Probable cell surface glycoprotein; PFAM: Subtilase family; hypothetical protein complement(4991694..4996280) Isosphaera pallida ATCC 43644 10157558 YP_004180513.1 CDS Isop_3405 NC_014962.1 4996839 4997237 R KEGG: rba:RB10483 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3467); hypothetical protein complement(4996839..4997237) Isosphaera pallida ATCC 43644 10157559 YP_004180514.1 CDS Isop_3406 NC_014962.1 4997620 4998102 R KEGG: psl:Psta_2769 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(4997620..4998102) Isosphaera pallida ATCC 43644 10157560 YP_004180515.1 CDS Isop_3407 NC_014962.1 4998700 5000016 R InterPro IPR011447; KEGG: psl:Psta_2274 protein of unknown function DUF1552; PFAM: protein of unknown function DUF1552; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1552); hypothetical protein complement(4998700..5000016) Isosphaera pallida ATCC 43644 10157561 YP_004180516.1 CDS Isop_3408 NC_014962.1 5000298 5002703 R InterPro IPR009056: IPR013042: IPR013039: IPR011658; KEGG: psl:Psta_2273 protein of unknown function DUF1588; PFAM: protein of unknown function DUF1592; protein of unknown function DUF1588; SMART: PA14 domain protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1588); Protein of unknown function (DUF1592); Protein of unknown function (DUF1595); PA14 domain; hypothetical protein complement(5000298..5002703) Isosphaera pallida ATCC 43644 10157562 YP_004180517.1 CDS Isop_3410 NC_014962.1 5003668 5003988 D InterPro IPR001383; KEGG: psl:Psta_4214 ribosomal protein L28; PFAM: ribosomal protein L28; SPTR: 50S ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; 50S ribosomal protein L28 5003668..5003988 Isosphaera pallida ATCC 43644 10157564 YP_004180518.1 CDS Isop_3411 NC_014962.1 5004532 5005638 R KEGG: rba:RB6430 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(5004532..5005638) Isosphaera pallida ATCC 43644 10157565 YP_004180519.1 CDS Isop_3412 NC_014962.1 5006044 5009130 R KEGG: mbr:MONBRDRAFT_26897 hypothetical protein; SPTR: Predicted protein; hypothetical protein complement(5006044..5009130) Isosphaera pallida ATCC 43644 10157566 YP_004180520.1 CDS Isop_3413 NC_014962.1 5009613 5011061 R InterPro IPR011701: IPR005829; KEGG: sus:Acid_2635 major facilitator transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Sugar (and other) transporter; major facilitator superfamily protein complement(5009613..5011061) Isosphaera pallida ATCC 43644 10157567 YP_004180521.1 CDS Isop_3414 NC_014962.1 5011402 5012685 R COGs: COG1453 oxidoreductase of the aldo/keto reductase family; InterPro IPR006311: IPR017909: IPR001395: IPR020471; KEGG: dma:DMR_27570 aldo/keto reductase family protein; PFAM: aldo/keto reductase; SPTR: Aldo/keto reductase; PFAM: Aldo/keto reductase family; aldo/keto reductase complement(5011402..5012685) Isosphaera pallida ATCC 43644 10157568 YP_004180522.1 CDS Isop_3415 NC_014962.1 5013312 5013557 R COGs: COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing); InterPro IPR003751; KEGG: nam:NAMH_0494 carbon storage regulator; PFAM: carbon storage regulator; SPTR: Carbon storage regulator homolog; TIGRFAM: carbon storage regulator; PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA); carbon storage regulator CsrA complement(5013312..5013557) Isosphaera pallida ATCC 43644 10157569 YP_004180523.1 CDS Isop_3416 NC_014962.1 5014074 5014790 R COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789; KEGG: alv:Alvin_2513 multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Multi-sensor hybrid histidine kinase; PFAM: Response regulator receiver domain; response regulator receiver protein complement(5014074..5014790) Isosphaera pallida ATCC 43644 10157570 YP_004180524.1 CDS Isop_3417 NC_014962.1 5015109 5016314 R COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR006070: IPR017867: IPR000106; KEGG: plm:Plim_2592 protein-tyrosine phosphatase, low molecular weight; PFAM: Protein-tyrosine phosphatase, low molecular weight; SUA5/yciO/yrdC domain; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: Protein-tyrosine phosphatase, low molecular weight; PFAM: Low molecular weight phosphotyrosine protein phosphatase; yrdC domain; protein tyrosine phosphatase complement(5015109..5016314) Isosphaera pallida ATCC 43644 10157571 YP_004180525.1 CDS Isop_3418 NC_014962.1 5016694 5016975 R KEGG: plm:Plim_0576 protein of unknown function DUF493; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF493); hypothetical protein complement(5016694..5016975) Isosphaera pallida ATCC 43644 10157572 YP_004180526.1 CDS Isop_3419 NC_014962.1 5017048 5017260 R hypothetical protein complement(5017048..5017260) Isosphaera pallida ATCC 43644 10157573 YP_004180527.1 CDS Isop_3420 NC_014962.1 5017338 5018060 D COGs: COG0689 RNase PH; InterPro IPR002381: IPR001247: IPR015847: IPR018336; KEGG: bac:BamMC406_0869 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: Ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH; RNAse PH 5017338..5018060 Isosphaera pallida ATCC 43644 10157574 YP_004180528.1 CDS Isop_3421 NC_014962.1 5018293 5019597 D KEGG: psl:Psta_2078 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 5018293..5019597 Isosphaera pallida ATCC 43644 10157575 YP_004180529.1 CDS Isop_3422 NC_014962.1 5019763 5020437 D COGs: COG0127 Xanthosine triphosphate pyrophosphatase; InterPro IPR002637: IPR020922; KEGG: rba:RB5134 xanthosine triphosphate pyrophosphatase; PFAM: Ham1 family protein; PRIAM: Nucleoside-triphosphatase; SPTR: Nucleoside-triphosphatase; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; non-canonical purine NTP pyrophosphatase 5019763..5020437 Isosphaera pallida ATCC 43644 10157576 YP_004180530.1 CDS Isop_3423 NC_014962.1 5020520 5021215 D InterPro IPR003006: IPR016130; KEGG: sno:Snov_2228 protein tyrosine/serine phosphatase; SPTR: Protein tyrosine/serine phosphatase; PFAM: Dual specificity phosphatase, catalytic domain; hypothetical protein 5020520..5021215 Isosphaera pallida ATCC 43644 10157577 YP_004180531.1 CDS Isop_3424 NC_014962.1 5021220 5022017 D InterPro IPR016130; KEGG: hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 5021220..5022017 Isosphaera pallida ATCC 43644 10157578 YP_004180532.1 CDS Isop_3425 NC_014962.1 5022107 5022973 R COGs: COG2107 periplasmic solute-binding protein; KEGG: plm:Plim_1988 protein of unknown function DUF191; SPTR: Putative uncharacterized protein; PFAM: Putative periplasminc binding protein (DUF178); hypothetical protein complement(5022107..5022973) Isosphaera pallida ATCC 43644 10157579 YP_004180533.1 CDS Isop_3426 NC_014962.1 5022970 5024433 R KEGG: plm:Plim_3751 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(5022970..5024433) Isosphaera pallida ATCC 43644 10157580 YP_004180534.1 CDS Isop_3427 NC_014962.1 5024430 5027126 R InterPro IPR022272; KEGG: psl:Psta_2388 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(5024430..5027126) Isosphaera pallida ATCC 43644 10157581 YP_004180535.1 CDS Isop_3428 NC_014962.1 5027415 5028383 R COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR017871: IPR003593; KEGG: psl:Psta_2389 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter; ABC transporter-like protein complement(5027415..5028383) Isosphaera pallida ATCC 43644 10157582 YP_004180536.1 CDS Isop_3429 NC_014962.1 5028799 5029341 R KEGG: tpe:Tpen_0749 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(5028799..5029341) Isosphaera pallida ATCC 43644 10157583 YP_004180537.1 CDS Isop_3430 NC_014962.1 5029647 5030225 D COGs: COG0512 Anthranilate/para-aminobenzoate synthase component II; InterProIPR006221: IPR017926: IPR000991: IPR006220: IPR 011702: IPR001317; KEGG: rba:RB6300 anthranilate synthase component II (glutamine amido-transferase); PFAM: glutamine amidotransferase class-I; SPTR: Glutamine amidotransferase of anthranilate synthase; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase; anthranilate synthase, component II 5029647..5030225 Isosphaera pallida ATCC 43644 10157584 YP_004180538.1 CDS Isop_3431 NC_014962.1 5030222 5031622 D COGs: COG0303 Molybdopterin biosynthesis enzyme; InterProIPR020817: IPR005110: IPR001453: IPR005111: IPR 008284; KEGG: psl:Psta_2706 molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; SPTR: Molybdenum cofactor synthesis domain protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain; molybdenum cofactor synthesis domain-containing protein 5030222..5031622 Isosphaera pallida ATCC 43644 10157585 YP_004180539.1 CDS Isop_3432 NC_014962.1 5031770 5033494 D COGs: COG0815 Apolipoprotein N-acyltransferase; InterPro IPR004563: IPR003010; KEGG: plm:Plim_3232 apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Apolipoprotein N-acyltransferase; TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase 5031770..5033494 Isosphaera pallida ATCC 43644 10157586 YP_004180540.1 CDS Isop_3433 NC_014962.1 5033512 5034831 R COGs: COG0593 ATPase involved in DNA replication initiation; InterPro IPR013317: IPR013159; KEGG: cwo:Cwoe_0001 chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; SMART: Chromosomal replication initiator DnaA domain; SPTR: Chromosomal replication initiator protein dnaA; PFAM: domain; Bacterial dnaA protein; Chromosomal replication initiator DnaA complement(5033512..5034831) Isosphaera pallida ATCC 43644 10157587 YP_004180541.1 CDS Isop_3434 NC_014962.1 5035013 5035870 R InterPro IPR004843; KEGG: psl:Psta_1609 hypothetical protein; PFAM: metallophosphoesterase; SPTR: Putative uncharacterized protein; PFAM: Calcineurin-like phosphoesterase; metallophosphoesterase complement(5035013..5035870) Isosphaera pallida ATCC 43644 10157588 YP_004180542.1 CDS Isop_3436 NC_014962.1 5036883 5038817 R COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003439: IPR017871: IPR003593; KEGG: psl:Psta_4055 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter; ABC transporter-like protein complement(5036883..5038817) Isosphaera pallida ATCC 43644 10157590 YP_004180543.1 CDS Isop_3437 NC_014962.1 5039281 5039943 D KEGG: ure:UREG_02925 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 5039281..5039943 Isosphaera pallida ATCC 43644 10157591 YP_004180544.1 CDS Isop_3438 NC_014962.1 5040002 5040322 D KEGG: plm:Plim_3927 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 5040002..5040322 Isosphaera pallida ATCC 43644 10157592 YP_004180545.1 CDS Isop_3439 NC_014962.1 5040319 5041341 D COGs: COG5309 Exo-beta-1 3-glucanase; KEGG: pla:Plav_0507 exo-beta-1 3-glucanase-like protein; SPTR: Exo-beta-1 3-glucanase-like protein; exo-beta-1 3-glucanase-like protein 5040319..5041341 Isosphaera pallida ATCC 43644 10157593 YP_004180546.1 CDS Isop_3440 NC_014962.1 5041684 5043174 D COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484: IPR018485; KEGG: psl:Psta_3010 carbohydrate kinase FGGY; PFAM: Carbohydrate kinase, FGGY-like; SPTR: Carbohydrate kinase FGGY; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: rhamnulokinase; carbohydrate kinase 5041684..5043174 Isosphaera pallida ATCC 43644 10157594 YP_004180547.1 CDS Isop_3441 NC_014962.1 5043301 5044266 R InterPro IPR013424: IPR011449; KEGG: ava:Ava_4160 VCBS; PFAM: protein of unknown function DUF1555; SPTR: VCBS; PFAM: PEP-CTERM motif; TIGRFAM: PEP-CTERM putative exosortase interaction domain; hypothetical protein complement(5043301..5044266) Isosphaera pallida ATCC 43644 10157595 YP_004180548.1 CDS Isop_3442 NC_014962.1 5044263 5045333 R COGs: COG1840 ABC-type Fe3+ transport system periplasmic component; InterPro IPR006059; KEGG: rba:RB531 iron (III) transport system (iron (III)-binding protein); PFAM: extracellular solute-binding protein family 1; SPTR: Iron (III) transport system (Iron (III)-binding protein); PFAM: Bacterial extracellular solute-binding protein; family 1 extracellular solute-binding protein complement(5044263..5045333) Isosphaera pallida ATCC 43644 10157596 YP_004180549.1 CDS Isop_3443 NC_014962.1 5045464 5048043 R COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017442: IPR008271: IPR020635: IPR 002290; KEGG: rba:RB5593 serine/threonine-protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine-protein kinase; PFAM: Protein kinase domain; serine/threonine protein kinase complement(5045464..5048043) Isosphaera pallida ATCC 43644 10157597 YP_004180550.1 CDS Isop_3444 NC_014962.1 5048480 5050750 D InterPro IPR000326: IPR018247: IPR005829; KEGG: nmu:Nmul_A0927 phosphoesterase, PA-phosphatase related; PFAM: phosphoesterase PA-phosphatase related; SPTR: Phosphoesterase, PA-phosphatase related; PFAM: PAP2 superfamily; phosphoesterase PA-phosphatase-like protein 5048480..5050750 Isosphaera pallida ATCC 43644 10157598 YP_004180551.1 CDS Isop_3445 NC_014962.1 5050910 5052277 D COGs: COG4102 conserved hypothetical protein; InterPro IPR006311: IPR017909: IPR010869; KEGG: psl:Psta_1944 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501); hypothetical protein 5050910..5052277 Isosphaera pallida ATCC 43644 10157599 YP_004180552.1 CDS Isop_3446 NC_014962.1 5052170 5052397 R KEGG: bbt:BBta_2238 putative outer membrane autotransporter protein; SPTR: Eukaryotic translation initiation factor 4H; hypothetical protein complement(5052170..5052397) Isosphaera pallida ATCC 43644 10157600 YP_004180553.1 CDS Isop_3447 NC_014962.1 5052492 5053367 D COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: plm:Plim_1622 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase 5052492..5053367 Isosphaera pallida ATCC 43644 10157601 YP_004180554.1 CDS Isop_3448 NC_014962.1 5053397 5055292 R COGs: COG1178 ABC-type Fe3+ transport system permease component; InterPro IPR000515; KEGG: psl:Psta_3967 binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component; hypothetical protein complement(5053397..5055292) Isosphaera pallida ATCC 43644 10157602 YP_004180555.1 CDS Isop_3449 NC_014962.1 5055354 5055713 D KEGG: ttu:TERTU_1014 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; SPTR: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 5055354..5055713 Isosphaera pallida ATCC 43644 10157603 YP_004180556.1 CDS Isop_3450 NC_014962.1 5055900 5056784 D KEGG: hwa:HQ1193A cell surface glycoprotein; SPTR: Proline rich protein; hypothetical protein 5055900..5056784 Isosphaera pallida ATCC 43644 10157604 YP_004180557.1 CDS Isop_3451 NC_014962.1 5056909 5058273 D COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sti:Sthe_1714 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Glycosyl transferases group 1; group 1 glycosyl transferase 5056909..5058273 Isosphaera pallida ATCC 43644 10157605 YP_004180558.1 CDS Isop_3452 NC_014962.1 5058537 5058722 R KEGG: hth:HTH_0204 permease of the major facilitator superfamily; SPTR: Permease of the major facilitator superfamily; hypothetical protein complement(5058537..5058722) Isosphaera pallida ATCC 43644 10157606 YP_004180559.1 CDS Isop_3453 NC_014962.1 5059179 5060204 R COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR006268: IPR006218; KEGG: ank:AnaeK_4176 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; PRIAM: 3-deoxy-7-phosphoheptulonate synthase; SPTR: Phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase complement(5059179..5060204) Isosphaera pallida ATCC 43644 10157607 YP_004180560.1 CDS Isop_3454 NC_014962.1 5060304 5061641 D InterPro IPR012902; KEGG: rba:RB11015 signal peptide; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1559); hypothetical protein 5060304..5061641 Isosphaera pallida ATCC 43644 10157608 YP_004180561.1 CDS Isop_3455 NC_014962.1 5061814 5062878 D KEGG: psl:Psta_2111 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 5061814..5062878 Isosphaera pallida ATCC 43644 10157609 YP_004180562.1 CDS Isop_3456 NC_014962.1 5063108 5063572 R COGs: COG0720 6-pyruvoyl-tetrahydropterin synthase; InterPro IPR007115; KEGG: psl:Psta_4202 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; 6-pyruvoyl tetrahydropterin synthase/QueD family protein; preQ(0) biosynthesis protein QueD complement(5063108..5063572) Isosphaera pallida ATCC 43644 10157610 YP_004180563.1 CDS Isop_3457 NC_014962.1 5064291 5064737 R KEGG: plm:Plim_1250 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(5064291..5064737) Isosphaera pallida ATCC 43644 10157611 YP_004180564.1 CDS Isop_3458 NC_014962.1 5064933 5066399 R InterPro IPR007263: IPR011020; KEGG: psl:Psta_2891 HTTM domain protein; PFAM: thiol-disulphide oxidoreductase DCC; SMART: HTTM domain protein; SPTR: Putative uncharacterized protein; PFAM: Vitamin K-dependent gamma-carboxylase; Protein of unknown function, DUF393; thiol-disulfide oxidoreductase DCC complement(5064933..5066399) Isosphaera pallida ATCC 43644 10157612 YP_004180565.1 CDS Isop_3459 NC_014962.1 5066384 5067064 R KEGG: psl:Psta_2892 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(5066384..5067064) Isosphaera pallida ATCC 43644 10157613 YP_004180566.1 CDS Isop_3460 NC_014962.1 5067512 5068192 D KEGG: mmu:77215 keratin associated protein 5-3; SPTR: Putative uncharacterized protein ENSMUSP00000081452; hypothetical protein 5067512..5068192 Isosphaera pallida ATCC 43644 10157614 YP_004180567.1 CDS Isop_3461 NC_014962.1 5068341 5069432 R COGs: COG1171 Threonine dehydratase; InterPro IPR001926: IPR000634; KEGG: scl:sce3847 putative serine/threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Putative serine/threonine dehydratase; PFAM: Pyridoxal-phosphate dependent enzyme; pyridoxal-5'-phosphate-dependent protein subunit beta complement(5068341..5069432) Isosphaera pallida ATCC 43644 10157615 YP_004180568.1 CDS Isop_3462 NC_014962.1 5069440 5069763 R InterPro IPR019734: IPR013026: IPR001440; KEGG: plm:Plim_0239 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Putative uncharacterized protein; PFAM: Tetratricopeptide repeat; hypothetical protein complement(5069440..5069763) Isosphaera pallida ATCC 43644 10157616 YP_004180569.1 CDS Isop_3463 NC_014962.1 5070378 5071646 D COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017442: IPR008271: IPR020635: IPR 002290; KEGG: psl:Psta_0270 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain; serine/threonine protein kinase 5070378..5071646 Isosphaera pallida ATCC 43644 10157617 YP_004180570.1 CDS Isop_3464 NC_014962.1 5072057 5073220 R KEGG: rba:RB5401 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(5072057..5073220) Isosphaera pallida ATCC 43644 10157618 YP_004180571.1 CDS Isop_3465 NC_014962.1 5073871 5074572 R InterPro IPR013424: IPR011449; KEGG: ote:Oter_3893 hypothetical protein; PFAM: protein of unknown function DUF1555; SPTR: Putative uncharacterized protein; PFAM: PEP-CTERM motif; TIGRFAM: PEP-CTERM putative exosortase interaction domain; hypothetical protein complement(5073871..5074572) Isosphaera pallida ATCC 43644 10157619 YP_004180572.1 CDS Isop_3466 NC_014962.1 5074930 5076234 R COGs: COG1914 Mn2+ and Fe2+ transporter of the NRAMP family; KEGG: psl:Psta_3779 Mn2+ and Fe2+ transporter of the NRAMP family-like protein; SPTR: Mn2+ and Fe2+ transporter of the NRAMP family-like protein; PFAM: Natural resistance-associated macrophage protein; NRAMP family Mn2+/Fe2+ transporter complement(5074930..5076234) Isosphaera pallida ATCC 43644 10157620 YP_004180573.1 CDS Isop_3467 NC_014962.1 5076377 5079331 R KEGG: rba:RB6221 signal peptide; SPTR: Putative uncharacterized protein; hypothetical protein complement(5076377..5079331) Isosphaera pallida ATCC 43644 10157621 YP_004180574.1 CDS Isop_3468 NC_014962.1 5079719 5080771 R COGs: COG3869 Arginine kinase; InterPro IPR000749; KEGG: plm:Plim_0763 ATP:guanido phosphotransferase; PFAM: ATP:guanido phosphotransferase; SPTR: Putative ATP:guanido phosphotransferase; PFAM: ATP:guanido phosphotransferase, C-terminal catalytic domain; ATP:guanido phosphotransferase complement(5079719..5080771) Isosphaera pallida ATCC 43644 10157622 YP_004180575.1 CDS Isop_3469 NC_014962.1 5080768 5081382 R COGs: COG3880 Uncharacterized protein with conserved CXXC pairs; KEGG: psl:Psta_3830 UvrB/UvrC protein; SPTR: UvrB/UvrC protein; hypothetical protein complement(5080768..5081382) Isosphaera pallida ATCC 43644 10157623 YP_004180576.1 CDS Isop_3470 NC_014962.1 5081502 5082080 R COGs: COG3880 Uncharacterized protein with conserved CXXC pairs; InterPro IPR001943; KEGG: psl:Psta_3830 UvrB/UvrC protein; PFAM: UvrB/UvrC protein; SPTR: UvrB/UvrC protein; PFAM: UvrB/uvrC motif; UvrB/UvrC protein complement(5081502..5082080) Isosphaera pallida ATCC 43644 10157624 YP_004180577.1 CDS Isop_3471 NC_014962.1 5083320 5087636 D COGs: COG0086 DNA-directed RNA polymerase beta' subunit/160 kD subunit; InterProIPR012754: IPR007080: IPR000722: IPR007066: IPR 007083: IPR007081: IPR006592; KEGG: plm:Plim_0472 DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; RNA polymerase Rpb1 domain 5; SMART: RNA polymerase I subunit A domain protein; SPTR: DNA-directed RNA polymerase subunit beta'; TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 5; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form; DNA-directed RNA polymerase subunit beta' 5083320..5087636 Isosphaera pallida ATCC 43644 10157625 YP_004180578.1 CDS Isop_3472 NC_014962.1 5088016 5088378 D KEGG: phu:Phum_PHUM547160 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 5088016..5088378 Isosphaera pallida ATCC 43644 10157626 YP_004180579.1 CDS Isop_3473 NC_014962.1 5088514 5089440 R COGs: COG0586 membrane-associated protein; InterPro IPR015414; KEGG: nmc:NMC1607 DedA family integral membrane protein; PFAM: SNARE associated Golgi protein; SPTR: Possible DedA family membrane protein; PFAM: SNARE associated Golgi protein; hypothetical protein complement(5088514..5089440) Isosphaera pallida ATCC 43644 10157627 YP_004180580.1 CDS Isop_3474 NC_014962.1 5089430 5089615 R hypothetical protein complement(5089430..5089615) Isosphaera pallida ATCC 43644 10157628 YP_004180581.1 CDS Isop_3475 NC_014962.1 5089560 5091560 R COGs: COG3276 Selenocysteine-specific translation elongation factor; InterProIPR005225: IPR004535: IPR000795: IPR004161: IPR 015191; KEGG: afw:Anae109_4150 selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 3; SPTR: Selenocysteine-specific translation elongation factor; TIGRFAM: selenocysteine-specific translation elongation factor; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; Elongation factor SelB, winged helix; TIGRFAM: selenocysteine-specific elongation factor SelB; small GTP-binding protein domain; translation elongation factor TU; selenocysteine-specific translation elongation factor complement(5089560..5091560) Isosphaera pallida ATCC 43644 10157629 YP_004180582.1 CDS Isop_3476 NC_014962.1 5091651 5092943 R COGs: COG3875 conserved hypothetical protein; InterPro IPR018657; KEGG: sno:Snov_3500 protein of unknown function DUF2088; PFAM: Protein of unknown function DUF2088; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (DUF2088); hypothetical protein complement(5091651..5092943) Isosphaera pallida ATCC 43644 10157630 YP_004180583.1 CDS Isop_3477 NC_014962.1 5093091 5093594 D COGs: COG1666 conserved hypothetical protein; InterPro IPR007551; KEGG: tjr:TherJR_1429 protein of unknown function DUF520; PFAM: protein of unknown function DUF520; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF520); hypothetical protein 5093091..5093594 Isosphaera pallida ATCC 43644 10157631 YP_004180584.1 CDS Isop_3478 NC_014962.1 5094168 5094437 D COGs: COG0184 Ribosomal protein S15P/S13E; InterPro IPR005290: IPR000589; KEGG: plm:Plim_0379 ribosomal protein S15; PFAM: ribosomal protein S15; SPTR: Ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle; 30S ribosomal protein S15 5094168..5094437 Isosphaera pallida ATCC 43644 10157632 YP_004180585.1 CDS Isop_3479 NC_014962.1 5094598 5094732 R hypothetical protein complement(5094598..5094732) Isosphaera pallida ATCC 43644 10157633 YP_004180586.1 CDS Isop_3480 NC_014962.1 5094888 5097188 D COGs: COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); InterProIPR012162: IPR004088: IPR003029: IPR001247: IPR 015847: IPR015848: IPR018111: IPR004087; KEGG: psl:Psta_4007 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding; K Homology, type 1, subgroup; RNA binding S1 domain protein; PRIAM: Polyribonucleotide nucleotidyltransferase; SMART: KH domain protein; SPTR: Polyribonucleotide nucleotidyltransferase; TIGRFAM: polyribonucleotide nucleotidyltransferase; PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; Polyribonucleotide nucleotidyltransferase, RNA binding domain; 3' exoribonuclease family, domain 2; TIGRFAM: polyribonucleotide nucleotidyltransferase; polyribonucleotide nucleotidyltransferase 5094888..5097188 Isosphaera pallida ATCC 43644 10157634 YP_004180587.1 CDS Isop_3481 NC_014962.1 5097486 5098424 D COGs: COG0642 Signal transduction histidine kinase; InterPro IPR005467: IPR003661: IPR003594: IPR004358; KEGG: rba:RB6818 sensory transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: Probable sensory transduction histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; histidine kinase 5097486..5098424 Isosphaera pallida ATCC 43644 10157635 YP_004180588.1 CDS Isop_3482 NC_014962.1 5098550 5099947 D COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR002078: IPR001789: IPR002197: IPR020441: IPR 003593; KEGG: plm:Plim_1639 sigma-54 factor interaction domain-containing protein; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: Probable response regulatory protein (AtoC); PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; Fis family two component sigma54 specific transcriptional regulator 5098550..5099947 Isosphaera pallida ATCC 43644 10157636 YP_004180589.1 CDS Isop_3483 NC_014962.1 5099992 5100360 D KEGG: psl:Psta_1460 DoxX family protein; SPTR: DoxX family protein; DoxX family protein 5099992..5100360 Isosphaera pallida ATCC 43644 10157637 YP_004180590.1 CDS Isop_3484 NC_014962.1 5100489 5102675 R COGs: COG0855 Polyphosphate kinase; InterPro IPR003414; KEGG: min:Minf_1437 polyphosphate kinase; PFAM: Polyphosphate kinase; PRIAM: Polyphosphate kinase; SPTR: Polyphosphate kinase; TIGRFAM: Polyphosphate kinase; PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1; polyphosphate kinase complement(5100489..5102675) Isosphaera pallida ATCC 43644 10157638 YP_004180591.1 CDS Isop_3485 NC_014962.1 5102767 5103921 R COGs: COG0648 Endonuclease IV; InterPro IPR001719: IPR012307: IPR018246; KEGG: adg:Adeg_1744 apurinic endonuclease Apn1; PFAM: Xylose isomerase domain-containing protein TIM barrel; PRIAM: Deoxyribonuclease IV (phage-T(4)-induced); SMART: AP endonuclease family 2; SPTR: Probable endonuclease 4; TIGRFAM: apurinic endonuclease Apn1; PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: apurinic endonuclease (APN1); apurinic endonuclease Apn1 complement(5102767..5103921) Isosphaera pallida ATCC 43644 10157639 YP_004180592.1 CDS Isop_3486 NC_014962.1 5104449 5105663 R KEGG: psl:Psta_2041 type II and III secretion system protein; SPTR: Type II and III secretion system protein; hypothetical protein complement(5104449..5105663) Isosphaera pallida ATCC 43644 10157640 YP_004180593.1 CDS Isop_3487 NC_014962.1 5105783 5106370 R KEGG: gau:GAU_2321 hypothetical membrane protein; SPTR: Hypothetical membrane protein; hypothetical protein complement(5105783..5106370) Isosphaera pallida ATCC 43644 10157641 YP_004180594.1 CDS Isop_3488 NC_014962.1 5106589 5109213 R KEGG: psl:Psta_1964 YTV domain protein; SPTR: YTV domain protein; hypothetical protein complement(5106589..5109213) Isosphaera pallida ATCC 43644 10157642 YP_004180595.1 CDS Isop_3489 NC_014962.1 5109345 5110556 D COGs: COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase); InterPro IPR002813: IPR004838; KEGG: plm:Plim_1589 arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ; PRIAM: Amino-acid N-acetyltransferase; SPTR: Arginine biosynthesis bifunctional protein ArgJ; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase; arginine biosynthesis bifunctional protein ArgJ 5109345..5110556 Isosphaera pallida ATCC 43644 10157643 YP_004180596.1 CDS Isop_3490 NC_014962.1 5110630 5111010 R KEGG: pth:PTH_1929 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(5110630..5111010) Isosphaera pallida ATCC 43644 10157644 YP_004180597.1 CDS Isop_3491 NC_014962.1 5111014 5112222 R InterPro IPR011742: IPR013383; KEGG: rce:RC1_3487 CRISPR-associated protein, putative; PFAM: CRISPR-associated protein TM1812; SPTR: CRISPR-associated protein, putative; TIGRFAM: CRISPR-associated protein, TM1812 family; CRISPR-associated protein DxTHG motif; PFAM: CRISPR-associated protein (cas_TM1812); TIGRFAM: CRISPR-associated protein, TM1812 family; CRISPR-associated DxTHG motif protein; CRISPR-associated protein complement(5111014..5112222) Isosphaera pallida ATCC 43644 10157645 YP_004180598.1 CDS Isop_3492 NC_014962.1 5112528 5113037 R KEGG: psl:Psta_4042 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(5112528..5113037) Isosphaera pallida ATCC 43644 10157646 YP_004180599.1 CDS Isop_3493 NC_014962.1 5113413 5114324 R COGs: COG0063 sugar kinase; InterPro IPR000631: IPR017953; KEGG: psl:Psta_3845 carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; SPTR: Carbohydrate kinase, YjeF related protein; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: Carbohydrate kinase; TIGRFAM: yjeF C-terminal region, hydroxyethylthiazole kinase-related; carbohydrate kinase complement(5113413..5114324) Isosphaera pallida ATCC 43644 10157647 YP_004180600.1 CDS Isop_3494 NC_014962.1 5114377 5115195 R COGs: COG1691 NCAIR mutase (PurE)-related protein; InterPro IPR000031; KEGG: psl:Psta_3844 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; SPTR: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; PFAM: AIR carboxylase; 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase complement(5114377..5115195) Isosphaera pallida ATCC 43644 10157648 YP_004180601.1 CDS Isop_3495 NC_014962.1 5115614 5116762 D KEGG: mtp:Mthe_1626 periplasmic copper-binding; SPTR: Putative lipoprotein; hypothetical protein 5115614..5116762 Isosphaera pallida ATCC 43644 10157649 YP_004180602.1 CDS Isop_3496 NC_014962.1 5116921 5118243 D COGs: COG0763 Lipid A disaccharide synthetase; InterPro IPR003835; KEGG: plm:Plim_0943 lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19; PRIAM: Lipid-A-disaccharide synthase; SPTR: Lipid-A-disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase; PFAM: Lipid-A-disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase; lipid-A-disaccharide synthase 5116921..5118243 Isosphaera pallida ATCC 43644 10157650 YP_004180603.1 CDS Isop_3497 NC_014962.1 5118292 5119851 R COGs: COG3349 conserved hypothetical protein; InterPro IPR017830: IPR002937: IPR001613; KEGG: plm:Plim_3204 squalene-associated FAD-dependent desaturase; PFAM: amine oxidase; SPTR: Carotene 7,8-desaturase; TIGRFAM: squalene-associated FAD-dependent desaturase; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: squalene-associated FAD-dependent desaturase; squalene-associated FAD-dependent desaturase complement(5118292..5119851) Isosphaera pallida ATCC 43644 10157651 YP_004180604.1 CDS Isop_3498 NC_014962.1 5119898 5120893 R COGs: COG1562 Phytoene/squalene synthetase; InterPro IPR002060: IPR019845; KEGG: sus:Acid_1266 farnesyl-diphosphate farnesyltransferase; PFAM: Squalene/phytoene synthase; PRIAM: Phytoene synthase; SPTR: Farnesyl-diphosphate farnesyltransferase; PFAM: Squalene/phytoene synthase; phytoene synthase complement(5119898..5120893) Isosphaera pallida ATCC 43644 10157652 YP_004180605.1 CDS Isop_3499 NC_014962.1 5120890 5121891 R COGs: COG1562 Phytoene/squalene synthetase; InterPro IPR017827: IPR002060; KEGG: plm:Plim_2245 squalene synthase HpnC; PFAM: Squalene/phytoene synthase; PRIAM: Phytoene synthase; SPTR: Phytoene synthase-related protein; TIGRFAM: squalene synthase HpnC; PFAM: Squalene/phytoene synthase; TIGRFAM: squalene synthase HpnC; squalene synthase complement(5120890..5121891) Isosphaera pallida ATCC 43644 10157653 YP_004180606.1 CDS Isop_3500 NC_014962.1 5122072 5124462 R KEGG: mta:Moth_1929 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(5122072..5124462) Isosphaera pallida ATCC 43644 10157654 YP_004180607.1 CDS Isop_3501 NC_014962.1 5124796 5126199 D COGs: COG4325 membrane protein; InterPro IPR018723; KEGG: cyc:PCC7424_1901 hypothetical protein; PFAM: Protein of unknown function DUF2254, membrane; SPTR: Putative uncharacterized protein; PFAM: Predicted membrane protein (DUF2254); hypothetical protein 5124796..5126199 Isosphaera pallida ATCC 43644 10157655 YP_004180608.1 CDS Isop_3502 NC_014962.1 5126263 5127333 R KEGG: sco:SCO2345 peptidodoglycan-binding membrane protein; SPTR: Putative peptidodoglycan-binding membrane protein; hypothetical protein complement(5126263..5127333) Isosphaera pallida ATCC 43644 10157656 YP_004180609.1 CDS Isop_3503 NC_014962.1 5127356 5128849 R InterPro IPR008671; KEGG: mrb:Mrub_0382 lycopene beta and epsilon cyclase; PFAM: Lycopene beta and epsilon cyclase; SPTR: Lycopene cyclase, putative; PFAM: Lycopene cyclase protein; TIGRFAM: lycopene cyclase family protein; Lycopene beta and epsilon cyclase complement(5127356..5128849) Isosphaera pallida ATCC 43644 10157657 YP_004180610.1 CDS Isop_3504 NC_014962.1 5128961 5130058 R InterPro IPR022270: IPR018130; KEGG: hma:rrnAC2066 Brp-like protein-like; SPTR: Brp-like protein-like; TIGRFAM: Beta-carotene 15,15'-monooxygenase, Brp/Blh family; TIGRFAM: beta-carotene 15,15'-monooxygenase, Brp/Blh family; Brp/Blh family beta-carotene 15,15'-monooxygenase complement(5128961..5130058) Isosphaera pallida ATCC 43644 10157658 YP_004180611.1 CDS Isop_3505 NC_014962.1 5130649 5131575 D COGs: COG5524 Bacteriorhodopsin; InterPro IPR017402: IPR001425: IPR018229; KEGG: srm:SRM_01698 Xanthorhodopsin; PFAM: rhodopsin; SPTR: Xanthorhodopsin; PFAM: Bacteriorhodopsin-like protein; rhodopsin 5130649..5131575 Isosphaera pallida ATCC 43644 10157659 YP_004180612.1 CDS Isop_3506 NC_014962.1 5131857 5133104 D KEGG: gox:GOX1189 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 5131857..5133104 Isosphaera pallida ATCC 43644 10157660 YP_004180613.1 CDS Isop_3507 NC_014962.1 5133101 5134222 D COGs: COG0535 Fe-S oxidoreductase; KEGG: nde:NIDE3701 hypothetical protein; SPTR: Radical SAM domain protein; PFAM: Radical SAM superfamily; Protein of unknown function (DUF3641); hypothetical protein 5133101..5134222 Isosphaera pallida ATCC 43644 10157661 YP_004180614.1 CDS Isop_3508 NC_014962.1 5134219 5134992 D COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: srm:SRM_01382 N-acetylglucosaminyltransferase; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase 5134219..5134992 Isosphaera pallida ATCC 43644 10157662 YP_004180615.1 CDS Isop_3509 NC_014962.1 5134989 5136533 D COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027: IPR004099: IPR000815: IPR012999; KEGG: gvi:gll0564 mercuric reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: Mercuric reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 5134989..5136533 Isosphaera pallida ATCC 43644 10157663 YP_004180616.1 CDS Isop_3510 NC_014962.1 5136953 5137825 D COGs: COG1801 conserved hypothetical protein; InterPro IPR002763; KEGG: rxy:Rxyl_1153 hypothetical protein; PFAM: protein of unknown function DUF72; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF72; hypothetical protein 5136953..5137825 Isosphaera pallida ATCC 43644 10157664 YP_004180617.1 CDS Isop_3511 NC_014962.1 5138146 5139627 D COGs: COG0784 FOG: CheY-like receiver; InterPro IPR001789: IPR008207; KEGG: mgm:Mmc1_3271 PAS/PAC sensor hybrid histidine kinase; PFAM: response regulator receiver; Hpt domain protein; SMART: response regulator receiver; SPTR: Putative uncharacterized protein; PFAM: Response regulator receiver domain; Hpt domain; response regulator receiver and Hpt phospho transfer protein 5138146..5139627 Isosphaera pallida ATCC 43644 10157665 YP_004180618.1 CDS Isop_3512 NC_014962.1 5139694 5140716 R KEGG: psl:Psta_0249 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(5139694..5140716) Isosphaera pallida ATCC 43644 10157666 YP_004180619.1 CDS Isop_3513 NC_014962.1 5141210 5142490 D InterPro IPR000357; KEGG: mbn:Mboo_0115 heat repeat-containing PBS lyase; PFAM: HEAT domain containing protein; SPTR: PBS lyase HEAT domain protein repeat-containing protein; PFAM: HEAT repeat; HEAT domain-containing protein 5141210..5142490 Isosphaera pallida ATCC 43644 10157667 YP_004180620.1 CDS Isop_3514 NC_014962.1 5142581 5144479 D KEGG: sus:Acid_1421 glycosyl transferase family protein; SPTR: Glycosyl transferase, family 39; hypothetical protein 5142581..5144479 Isosphaera pallida ATCC 43644 10157668 YP_004180621.1 CDS Isop_3515 NC_014962.1 5144579 5145421 R COGs: COG0777 Acetyl-CoA carboxylase beta subunit; InterPro IPR000438: IPR011762; KEGG: plm:Plim_0650 acetyl-CoA carboxylase, carboxyl transferase, beta subunit; SPTR: Acetyl-CoA carboxylase, carboxyl transferase, beta subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; acetyl-CoA carboxylase carboxyltransferase subunit alpha complement(5144579..5145421) Isosphaera pallida ATCC 43644 10157669 YP_004180622.1 CDS Isop_3516 NC_014962.1 5145563 5146147 R COGs: COG0406 Fructose-2 6-bisphosphatase; InterPro IPR013078; KEGG: psl:Psta_1419 phosphoglycerate mutase; PFAM: Phosphoglycerate mutase; SPTR: Probable phosphoglycerate mutase; PFAM: Phosphoglycerate mutase family; phosphoglycerate mutase complement(5145563..5146147) Isosphaera pallida ATCC 43644 10157670 YP_004180623.1 CDS Isop_3517 NC_014962.1 5146256 5147023 R COGs: COG0036 Pentose-5-phosphate-3-epimerase; InterPro IPR000056; KEGG: plm:Plim_0648 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; PRIAM: Ribulose-phosphate 3-epimerase; SPTR: Ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase; Ribulose-phosphate 3-epimerase complement(5146256..5147023) Isosphaera pallida ATCC 43644 10157671 YP_004180624.1 CDS Isop_3518 NC_014962.1 5147200 5148396 R COGs: COG0126 3-phosphoglycerate kinase; InterPro IPR001576: IPR015911; KEGG: tte:TTE1761 phosphoglycerate kinase; PFAM: phosphoglycerate kinase; PRIAM: Phosphoglycerate kinase; SPTR: Phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; phosphoglycerate kinase complement(5147200..5148396) Isosphaera pallida ATCC 43644 10157672 YP_004180625.1 CDS Isop_3519 NC_014962.1 5148564 5149571 R COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterProIPR006424: IPR020831: IPR020828: IPR020829: IPR 020832: IPR020830; KEGG: plm:Plim_0647 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); SPTR: Strongly similar to glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; glyceraldehyde-3-phosphate dehydrogenase complement(5148564..5149571) Isosphaera pallida ATCC 43644 10157673 YP_004180626.1 CDS Isop_3520 NC_014962.1 5149976 5151043 D KEGG: htu:Htur_4304 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 5149976..5151043 Isosphaera pallida ATCC 43644 10157674 YP_004180627.1 CDS Isop_3521 NC_014962.1 5151521 5152225 R COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; KEGG: slp:Slip_2317 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(5151521..5152225) Isosphaera pallida ATCC 43644 10157675 YP_004180628.1 CDS Isop_3522 NC_014962.1 5152258 5152773 R COGs: COG1765 redox protein regulator of disulfide bond formation; InterPro IPR003718; KEGG: mrd:Mrad2831_0867 OsmC family protein; PFAM: OsmC family protein; SPTR: OsmC family protein; PFAM: OsmC-like protein; OsmC family protein complement(5152258..5152773) Isosphaera pallida ATCC 43644 10157676 YP_004180629.1 CDS Isop_3523 NC_014962.1 5152922 5155291 R COGs: COG2319 FOG: WD40 repeat; InterProIPR019782: IPR017986: IPR009056: IPR019781: IPR 019775: IPR001680; KEGG: psl:Psta_2093 planctomycete cytochrome c; PFAM: WD40 repeat, subgroup; SPTR: Planctomycete cytochrome C; PFAM: WD domain, G-beta repeat; Planctomycete cytochrome C; WD40 repeat-containing protein complement(5152922..5155291) Isosphaera pallida ATCC 43644 10157677 YP_004180630.1 CDS Isop_3524 NC_014962.1 5155444 5157933 R InterPro IPR003343: IPR011444; KEGG: psl:Psta_2092 protein of unknown function DUF1549; PFAM: protein of unknown function DUF1549; Ig domain protein group 2 domain protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1549); Protein of unknown function (DUF1553); hypothetical protein complement(5155444..5157933) Isosphaera pallida ATCC 43644 10157678 YP_004180631.1 CDS Isop_3525 NC_014962.1 5158139 5160781 R InterPro IPR007280; KEGG: psl:Psta_2091 peptidase domain protein; PFAM: peptidase domain protein; SPTR: Peptidase domain protein; PFAM: Bacterial Ig-like domain (DUF1927); peptidase domain-containing protein complement(5158139..5160781) Isosphaera pallida ATCC 43644 10157679 YP_004180632.1 CDS Isop_3526 NC_014962.1 5161348 5162667 R InterPro IPR006311: IPR017909: IPR010869; KEGG: psl:Psta_2090 protein of unknown function DUF1501; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501); hypothetical protein complement(5161348..5162667) Isosphaera pallida ATCC 43644 10157680 YP_004180633.1 CDS Isop_3527 NC_014962.1 5163100 5163579 R COGs: COG0328 Ribonuclease HI; InterPro IPR002156; KEGG: psl:Psta_2497 ribonuclease H; PFAM: ribonuclease H; PRIAM: Ribonuclease H; SPTR: Ribonuclease H; PFAM: RNase H; RNase HI complement(5163100..5163579) Isosphaera pallida ATCC 43644 10157681 YP_004180634.1 CDS Isop_3528 NC_014962.1 5163884 5165260 R COGs: COG2081 flavoprotein; InterPro IPR004792; KEGG: psl:Psta_0791 HI0933 family protein; PFAM: HI0933 family protein; SPTR: HI0933 family protein; PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family; hypothetical protein complement(5163884..5165260) Isosphaera pallida ATCC 43644 10157682 YP_004180635.1 CDS Isop_3529 NC_014962.1 5165320 5166639 R InterPro IPR003593; KEGG: plm:Plim_3352 AAA ATPase; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; AAA ATPase complement(5165320..5166639) Isosphaera pallida ATCC 43644 10157683 YP_004180636.1 CDS Isop_3530 NC_014962.1 5166739 5167302 R COGs: COG0802 ATPase or kinase; InterPro IPR003442; KEGG: avi:Avi_0051 hypothetical protein; PFAM: Uncharacterised protein family UPF0079, ATPase; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family; hypothetical protein complement(5166739..5167302) Isosphaera pallida ATCC 43644 10157684 YP_004180637.1 CDS Isop_3531 NC_014962.1 5167315 5168034 R COGs: COG1411 Uncharacterized protein related to proFAR isomerase (HisA); InterPro IPR006062; KEGG: vap:Vapar_3068 histidine biosynthesis protein; PFAM: histidine biosynthesis protein; SPTR: HisA/HisF family protein, putative; PFAM: Histidine biosynthesis protein; histidine biosynthesis protein complement(5167315..5168034) Isosphaera pallida ATCC 43644 10157685 YP_004180638.1 CDS Isop_3532 NC_014962.1 5168083 5169387 D InterPro IPR011761: IPR003806; KEGG: mpt:Mpe_A2621 hypothetical protein; PFAM: protein of unknown function DUF201; SPTR: Putative uncharacterized protein; PFAM: ATP-grasp domain; hypothetical protein 5168083..5169387 Isosphaera pallida ATCC 43644 10157686 YP_004180639.1 CDS Isop_3533 NC_014962.1 5169535 5170590 D COGs: COG1548 transcriptional regulator/sugar kinase; InterPro IPR002756: IPR002821; KEGG: plm:Plim_0257 H4MPT-linked C1 transfer pathway protein; PFAM: Hydantoinase/oxoprolinase; SPTR: Conserved protein; TIGRFAM: H4MPT-linked C1 transfer pathway protein; manually curated; PFAM: Hydantoinase/oxoprolinase; TIGRFAM: probable H4MPT-linked C1 transfer pathway protein; H4MPT-linked C1 transfer pathway protein 5169535..5170590 Isosphaera pallida ATCC 43644 10157687 YP_004180640.1 CDS Isop_3534 NC_014962.1 5170587 5171318 D COGs: COG2054 Uncharacterized kinase related to aspartokinase uridylate kinase; InterPro IPR001048; KEGG: psl:Psta_3593 aspartate/glutamate/uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; SPTR: Aspartate/glutamate/uridylate kinase; PFAM: Amino acid kinase family; aspartate/glutamate/uridylate kinase 5170587..5171318 Isosphaera pallida ATCC 43644 10157688 YP_004180641.1 CDS Isop_3535 NC_014962.1 5171416 5172564 R COGs: COG4867 Uncharacterized protein with a von Willebrand factor type A (vWA) domain; InterPro IPR002035; KEGG: plm:Plim_0521 von Willebrand factor type A; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: von Willebrand factor type A; PFAM: von Willebrand factor type A domain; von Willebrand factor type A complement(5171416..5172564) Isosphaera pallida ATCC 43644 10157689 YP_004180642.1 CDS Isop_3536 NC_014962.1 5172746 5174206 R COGs: COG1239 Mg-chelatase subunit ChlI; KEGG: plm:Plim_1164 magnesium protoporphyrin chelatase, putative; SPTR: Magnesium protoporphyrin chelatase, putative; magnesium protoporphyrin chelatase complement(5172746..5174206) Isosphaera pallida ATCC 43644 10157690 YP_004180643.1 CDS Isop_3537 NC_014962.1 5174398 5175876 R InterPro IPR013222; KEGG: psl:Psta_2909 glycosyl hydrolase family 98 putative carbohydrate binding module; PFAM: Glycosyl hydrolase family 98 putative carbohydrate binding module; SMART: Glycosyl hydrolase family 98 putative carbohydrate binding module; SPTR: Putative uncharacterized protein; PFAM: NPCBM/NEW2 domain; glycosyl hydrolase family 98 putative carbohydrate-binding module complement(5174398..5175876) Isosphaera pallida ATCC 43644 10157691 YP_004180644.1 CDS Isop_3538 NC_014962.1 5175975 5177060 R InterPro IPR001330; KEGG: psl:Psta_2910 hypothetical protein; PFAM: Prenyltransferase/squalene oxidase; SPTR: Putative uncharacterized protein; prenyltransferase/squalene oxidase complement(5175975..5177060) Isosphaera pallida ATCC 43644 10157692 YP_004180645.1 CDS Isop_3539 NC_014962.1 5177065 5178048 R KEGG: psl:Psta_2911 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(5177065..5178048) Isosphaera pallida ATCC 43644 10157693 YP_004180646.1 CDS Isop_3540 NC_014962.1 5178050 5181946 R KEGG: srm:SRM_02025 conserved hypothetical protein, membrane; SPTR: Putative uncharacterized protein; hypothetical protein complement(5178050..5181946) Isosphaera pallida ATCC 43644 10157694 YP_004180647.1 CDS Isop_3541 NC_014962.1 5182307 5184763 R InterPro IPR002035: IPR010768; KEGG: psl:Psta_2913 protein of unknown function DUF1355; PFAM: protein of unknown function DUF1355; von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: Putative uncharacterized protein; PFAM: von Willebrand factor type A domain; Protein of unknown function (DUF1355); hypothetical protein complement(5182307..5184763) Isosphaera pallida ATCC 43644 10157695 YP_004180648.1 CDS Isop_3542 NC_014962.1 5184878 5187151 R InterPro IPR011933: IPR002035; KEGG: psl:Psta_2914 hypothetical protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein; PFAM: von Willebrand factor type A domain; Aerotolerance regulator N-terminal; CARDB; TIGRFAM: N-terminal double-transmembrane domain; hypothetical protein complement(5184878..5187151) Isosphaera pallida ATCC 43644 10157696 YP_004180649.1 CDS Isop_3543 NC_014962.1 5187275 5188183 R COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881: IPR002035; KEGG: psl:Psta_2915 protein of unknown function DUF58; PFAM: protein of unknown function DUF58; SMART: von Willebrand factor type A; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF58; hypothetical protein complement(5187275..5188183) Isosphaera pallida ATCC 43644 10157697 YP_004180650.1 CDS Isop_3544 NC_014962.1 5188442 5189536 R COGs: COG0714 MoxR-like ATPase; InterPro IPR016366: IPR011703; KEGG: psl:Psta_2916 ATPase associated with various cellular activities AAA_3; PFAM: ATPase associated with various cellular activities AAA_3; SPTR: Putative uncharacterized protein; PFAM: ATPase family associated with various cellular activities (AAA); ATPase complement(5188442..5189536) Isosphaera pallida ATCC 43644 10157698 YP_004180651.1 CDS Isop_3545 NC_014962.1 5189895 5194766 R InterPro IPR002372: IPR019734: IPR018391; KEGG: psl:Psta_2917 hypothetical protein; PFAM: Pyrrolo-quinoline quinone repeat-containing protein; SPTR: Putative uncharacterized protein; pyrrolo-quinoline quinone repeat-containing protein complement(5189895..5194766) Isosphaera pallida ATCC 43644 10157699 YP_004180652.1 CDS Isop_3546 NC_014962.1 5195325 5197169 D InterPro IPR002052; KEGG: afv:AFLA_092170 hypothetical protein; SPTR: Minus agglutinin; hypothetical protein 5195325..5197169 Isosphaera pallida ATCC 43644 10157700 YP_004180653.1 CDS Isop_3547 NC_014962.1 5197334 5198647 R COGs: COG0373 Glutamyl-tRNA reductase; InterProIPR000343: IPR015895: IPR006151: IPR015896: IPR 018214; KEGG: plm:Plim_1296 glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; Shikimate/quinate 5-dehydrogenase; SPTR: Glutamyl-tRNA reductase; TIGRFAM: glutamyl-tRNA reductase; PFAM: Glutamyl-tRNAGlu reductase, N-terminal domain; Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase; glutamyl-tRNA reductase complement(5197334..5198647) Isosphaera pallida ATCC 43644 10157701 YP_004180654.1 CDS Isop_3548 NC_014962.1 5198644 5199690 R InterPro IPR002541; KEGG: psl:Psta_0386 hypothetical protein; PFAM: cytochrome c assembly protein; SPTR: Putative uncharacterized protein; PFAM: Cytochrome C assembly protein; cytochrome c assembly protein complement(5198644..5199690) Isosphaera pallida ATCC 43644 10157702 YP_004180655.1 CDS Isop_3549 NC_014962.1 5200148 5200795 D KEGG: cre:CHLREDRAFT_173152 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 5200148..5200795 Isosphaera pallida ATCC 43644 10157703 YP_004180656.1 CDS Isop_3550 NC_014962.1 5200845 5201747 R COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160: IPR000253: IPR005829; KEGG: hoh:Hoch_5913 diguanylate cyclase; PFAM: GGDEF domain containing protein; Forkhead-associated protein; SMART: GGDEF domain containing protein; Forkhead-associated protein; SPTR: Diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain; FHA domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase complement(5200845..5201747) Isosphaera pallida ATCC 43644 10157704 YP_004180657.1 CDS Isop_3551 NC_014962.1 5201974 5204475 R InterPro IPR003343: IPR011444; KEGG: sus:Acid_5709 hypothetical protein; PFAM: protein of unknown function DUF1549; Ig domain protein group 2 domain protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial Ig-like domain (group 2); Protein of unknown function (DUF1549); Protein of unknown function (DUF1553); hypothetical protein complement(5201974..5204475) Isosphaera pallida ATCC 43644 10157705 YP_004180658.1 CDS Isop_3552 NC_014962.1 5204654 5205232 R COGs: COG1225 Peroxiredoxin; InterPro IPR017936: IPR000866; KEGG: psl:Psta_2043 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: AhpC/TSA family; alkyl hydroperoxide reductase complement(5204654..5205232) Isosphaera pallida ATCC 43644 10157706 YP_004180659.1 CDS Isop_3553 NC_014962.1 5205613 5208510 D KEGG: hau:Haur_0785 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 5205613..5208510 Isosphaera pallida ATCC 43644 10157707 YP_004180660.1 CDS Isop_3554 NC_014962.1 5208763 5209368 R COGs: COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidase); InterPro IPR006200: IPR006199: IPR019759: IPR006197; KEGG: plm:Plim_2243 LexA repressor; PFAM: LexA DNA-binding domain protein; Peptidase S24/S26A/S26B, conserved region; SPTR: LexA repressor; TIGRFAM: LexA repressor; PFAM: LexA DNA binding domain; Peptidase S24-like; TIGRFAM: SOS regulatory protein LexA; SOS-response transcriptional repressor, LexA complement(5208763..5209368) Isosphaera pallida ATCC 43644 10157708 YP_004180661.1 CDS Isop_3555 NC_014962.1 5209876 5210727 D COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: rba:RB3342 hypothetical protein; PFAM: LmbE family protein; SPTR: Putative uncharacterized protein; PFAM: GlcNAc-PI de-N-acetylase; LmbE family protein 5209876..5210727 Isosphaera pallida ATCC 43644 10157709 YP_004180662.1 CDS Isop_3556 NC_014962.1 5210859 5212406 R COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590: IPR016160; KEGG: psl:Psta_1855 aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; SPTR: Aldehyde Dehydrogenase; PFAM: Aldehyde dehydrogenase family; aldehyde dehydrogenase complement(5210859..5212406) Isosphaera pallida ATCC 43644 10157710 YP_004180663.1 CDS Isop_3557 NC_014962.1 5212762 5213676 R COGs: COG0338 Site-specific DNA methylase; InterPro IPR012327: IPR002294; KEGG: rrs:RoseRS_0743 D12 class N6 adenine-specific DNA methyltransferase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; SPTR: D12 class N6 adenine-specific DNA methyltransferase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; D12 class N6 adenine-specific DNA methyltransferase complement(5212762..5213676) Isosphaera pallida ATCC 43644 10157711 YP_004180664.1 CDS Isop_3558 NC_014962.1 5213902 5215179 D COGs: COG1858 Cytochrome c peroxidase; InterPro IPR004852; KEGG: plm:Plim_0026 cytochrome-c peroxidase; PFAM: Di-haem cytochrome c peroxidase; PRIAM: Cytochrome-c peroxidase; SPTR: Di-haem cytochrome c peroxidase family protein; PFAM: Di-haem cytochrome c peroxidase; cytochrome-c peroxidase 5213902..5215179 Isosphaera pallida ATCC 43644 10157712 YP_004180665.1 CDS Isop_3559 NC_014962.1 5215337 5216365 D InterPro IPR012902: IPR001120; KEGG: plm:Plim_0027 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 5215337..5216365 Isosphaera pallida ATCC 43644 10157713 YP_004180666.1 CDS Isop_3560 NC_014962.1 5216372 5217694 R COGs: COG0014 Gamma-glutamyl phosphate reductase; InterPro IPR000965: IPR012134: IPR015590: IPR020593; KEGG: psl:Psta_3777 gamma-glutamyl phosphate reductase; PFAM: Aldehyde Dehydrogenase; PRIAM: Glutamate-5-semialdehyde dehydrogenase; SPTR: Gamma-glutamyl phosphate reductase; TIGRFAM: gamma-glutamyl phosphate reductase; PFAM: Aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase; glutamate-5-semialdehyde dehydrogenase complement(5216372..5217694) Isosphaera pallida ATCC 43644 10157714 YP_004180667.1 CDS Isop_3561 NC_014962.1 5217776 5218690 R COGs: COG0294 Dihydropteroate synthase; InterPro IPR006390: IPR000489; KEGG: mfa:Mfla_0784 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; PRIAM: Dihydropteroate synthase; SPTR: Dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase; Dihydropteroate synthase complement(5217776..5218690) Isosphaera pallida ATCC 43644 10157715 YP_004180668.1 CDS Isop_3562 NC_014962.1 5218796 5219350 R KEGG: plm:Plim_0727 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(5218796..5219350) Isosphaera pallida ATCC 43644 10157716 YP_004180669.1 CDS Isop_3563 NC_014962.1 5219475 5220977 R InterPro IPR019734: IPR013026: IPR001440; KEGG: plm:Plim_0726 hypothetical protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Putative uncharacterized protein; hypothetical protein complement(5219475..5220977) Isosphaera pallida ATCC 43644 10157717 YP_004180670.1 CDS Isop_3564 NC_014962.1 5220982 5221755 R COGs: COG1381 Recombinational DNA repair protein (RecF pathway); InterPro IPR003717; KEGG: plm:Plim_0725 DNA repair protein RecO; PFAM: Recombination protein O RecO; SPTR: DNA repair protein RecO; TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O C terminal; Recombination protein O N terminal; TIGRFAM: DNA repair protein RecO; DNA repair protein RecO complement(5220982..5221755) Isosphaera pallida ATCC 43644 10157718 YP_004180671.1 CDS Isop_3565 NC_014962.1 5222164 5223249 D COGs: COG5012 cobalamin binding protein; InterPro IPR010093: IPR006158: IPR000551; KEGG: psl:Psta_1633 DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; cobalamin B12-binding domain protein; SPTR: DNA binding domain protein, excisionase family; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: MerR family regulatory protein; B12 binding domain; TIGRFAM: DNA binding domain, excisionase family; excisionase family DNA-binding domain-containing protein 5222164..5223249 Isosphaera pallida ATCC 43644 10157719 YP_004180672.1 CDS Isop_3566 NC_014962.1 5223416 5224384 D COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterPro IPR014284: IPR007627: IPR007630: IPR000943; KEGG: sti:Sthe_1849 RNA polymerase, sigma 70 subunit, RpoD subfamily; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-32 subunit RpoH 5223416..5224384 Isosphaera pallida ATCC 43644 10157720 YP_004180673.1 CDS Isop_3567 NC_014962.1 5224889 5225947 D COGs: COG0714 MoxR-like ATPase; InterPro IPR016366: IPR011703; KEGG: shc:Shell_0365 ATPase associated with various cellular activities AAA_3; PFAM: ATPase associated with various cellular activities AAA_3; SPTR: ATPase, AAA family protein; PFAM: ATPase family associated with various cellular activities (AAA); ATPase 5224889..5225947 Isosphaera pallida ATCC 43644 10157721 YP_004180674.1 CDS Isop_3568 NC_014962.1 5226070 5226939 D COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: gau:GAU_1525 hypothetical protein; PFAM: protein of unknown function DUF58; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function DUF58; hypothetical protein 5226070..5226939 Isosphaera pallida ATCC 43644 10157722 YP_004180675.1 CDS Isop_3569 NC_014962.1 5226936 5228009 D KEGG: fre:Franean1_4833 LuxR family transcriptional regulator; SPTR: Putative uncharacterized protein; hypothetical protein 5226936..5228009 Isosphaera pallida ATCC 43644 10157723 YP_004180676.1 CDS Isop_3570 NC_014962.1 5228002 5228973 D InterPro IPR002035; KEGG: cte:CT2278 hypothetical protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: Putative uncharacterized protein; PFAM: von Willebrand factor type A domain; von Willebrand factor type A 5228002..5228973 Isosphaera pallida ATCC 43644 10157724 YP_004180677.1 CDS Isop_3571 NC_014962.1 5228967 5230037 D InterPro IPR002035; KEGG: rlg:Rleg_5138 von Willebrand factor type A; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; SPTR: Putative uncharacterized protein; PFAM: von Willebrand factor type A domain; von Willebrand factor type A 5228967..5230037 Isosphaera pallida ATCC 43644 10157725 YP_004180678.1 CDS Isop_3572 NC_014962.1 5230167 5230862 D KEGG: mrb:Mrub_1682 putative adenylate/guanylate cyclase; SPTR: Putative uncharacterized protein; hypothetical protein 5230167..5230862 Isosphaera pallida ATCC 43644 10157726 YP_004180679.1 CDS Isop_3573 NC_014962.1 5231000 5235337 D KEGG: cre:CHLREDRAFT_193606 hypothetical protein; SPTR: Protein disulfide isomerase; hypothetical protein 5231000..5235337 Isosphaera pallida ATCC 43644 10157727 YP_004180680.1 CDS Isop_3574 NC_014962.1 5235634 5236575 D InterPro IPR000620; KEGG: plm:Plim_0609 protein of unknown function DUF6 transmembrane; PFAM: protein of unknown function DUF6 transmembrane; SPTR: Putative uncharacterized protein; PFAM: EamA-like transporter family; hypothetical protein 5235634..5236575 Isosphaera pallida ATCC 43644 10157728 YP_004180681.1 CDS Isop_3575 NC_014962.1 5236844 5238580 D COGs: COG0531 Amino acid transporter; InterPro IPR002293: IPR004841; KEGG: gau:GAU_2006 putative permease; PFAM: amino acid permease-associated region; SPTR: Putative permease; PFAM: Amino acid permease; amino acid permease 5236844..5238580 Isosphaera pallida ATCC 43644 10157729 YP_004180682.1 CDS Isop_3576 NC_014962.1 5238577 5239638 D InterPro IPR006342: IPR010916; KEGG: sco:SCO3866 hypothetical protein; SPTR: Mucin-2; TIGRFAM: methyltransferase FkbM family; TIGRFAM: methyltransferase, FkbM family; FkbM family methyltransferase 5238577..5239638 Isosphaera pallida ATCC 43644 10157730 YP_004180683.1 CDS Isop_3577 NC_014962.1 5239614 5240450 R COGs: COG1407 ICC-like phosphoesterase; KEGG: pfu:PF1484 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: putative phosphoesterase, SbcD/Mre11-related; hypothetical protein complement(5239614..5240450) Isosphaera pallida ATCC 43644 10157731 YP_004180684.1 CDS Isop_3578 NC_014962.1 5240494 5241465 D COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; KEGG: hau:Haur_4875 putative lipase/esterase; SPTR: Alpha/beta hydrolase domain-containing protein; PFAM: Prolyl oligopeptidase family; hypothetical protein 5240494..5241465 Isosphaera pallida ATCC 43644 10157732 YP_004180685.1 CDS Isop_3579 NC_014962.1 5241864 5243285 D COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000994; KEGG: plm:Plim_3231 hypothetical protein; PFAM: peptidase M24; SPTR: Putative uncharacterized protein; PFAM: Metallopeptidase family M24; peptidase M24 5241864..5243285 Isosphaera pallida ATCC 43644 10157733 YP_004180686.1 CDS Isop_3580 NC_014962.1 5243359 5244048 R COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: dae:Dtox_2285 beta-lactamase domain protein; SPTR: Beta-lactamase domain protein; PFAM: Metallo-beta-lactamase superfamily; hypothetical protein complement(5243359..5244048) Isosphaera pallida ATCC 43644 10157734 YP_004180687.1 CDS Isop_3581 NC_014962.1 5244593 5245630 D InterPro IPR011465; KEGG: psl:Psta_2867 protein of unknown function DUF1571; PFAM: protein of unknown function DUF1571; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1571); hypothetical protein 5244593..5245630 Isosphaera pallida ATCC 43644 10157735 YP_004180688.1 CDS Isop_3582 NC_014962.1 5245956 5246540 D COGs: COG0456 Acetyltransferase; InterPro IPR000182; KEGG: plm:Plim_1165 ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Ribosomal-protein-alanine acetyltransferase; PFAM: Acetyltransferase (GNAT) family; N-acetyltransferase GCN5 5245956..5246540 Isosphaera pallida ATCC 43644 10157736 YP_004180689.1 CDS Isop_3583 NC_014962.1 5246617 5247765 R InterPro IPR002575; KEGG: psl:Psta_0027 aminoglycoside phosphotransferase; PFAM: aminoglycoside phosphotransferase; SPTR: Putative uncharacterized protein; PFAM: Phosphotransferase enzyme family; aminoglycoside phosphotransferase complement(5246617..5247765) Isosphaera pallida ATCC 43644 10157737 YP_004180690.1 CDS Isop_3584 NC_014962.1 5248052 5250862 R COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR002541; KEGG: bba:Bd1606 cytochrome c-type biogenesis protein; PFAM: cytochrome c assembly protein; SPTR: Cytochrome C assembly protein; PFAM: Cytochrome C assembly protein; cytochrome c assembly protein complement(5248052..5250862) Isosphaera pallida ATCC 43644 10157738 YP_004180691.1 CDS Isop_3585 NC_014962.1 5250986 5253373 R KEGG: amr:AM1_4402 cytochrome c biogenesis protein, CcsB-like protein, putative; SPTR: Cytochrome c biogenesis protein, CcsB-like protein, putative; PFAM: ResB-like family; hypothetical protein complement(5250986..5253373) Isosphaera pallida ATCC 43644 10157739 YP_004180692.1 CDS Isop_3586 NC_014962.1 5254102 5255187 D COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: psl:Psta_3599 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase domain-containing protein 5254102..5255187 Isosphaera pallida ATCC 43644 10157740 YP_004180693.1 CDS Isop_3587 NC_014962.1 5255350 5257215 R KEGG: cel:ZK643.8 GRound-Like (grd related); SPTR: Protein ZK643.8, partially confirmed by transcript evidence; hypothetical protein complement(5255350..5257215) Isosphaera pallida ATCC 43644 10157741 YP_004180694.1 CDS Isop_3588 NC_014962.1 5257605 5258093 R COGs: COG4446 conserved hypothetical protein; InterPro IPR010865; KEGG: ana:all1003 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1499); hypothetical protein complement(5257605..5258093) Isosphaera pallida ATCC 43644 10157742 YP_004180695.1 CDS Isop_3589 NC_014962.1 5258106 5258624 R InterPro IPR013026; KEGG: chu:CHU_0144 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(5258106..5258624) Isosphaera pallida ATCC 43644 10157743 YP_004180696.1 CDS Isop_3590 NC_014962.1 5259290 5260069 D COGs: COG2071 glutamine amidotransferase; InterPro IPR017926: IPR011697; KEGG: psl:Psta_2837 peptidase C26; PFAM: peptidase C26; SPTR: Peptidase C26; PFAM: Peptidase C26; peptidase C26 5259290..5260069 Isosphaera pallida ATCC 43644 10157744 YP_004180697.1 CDS Isop_3591 NC_014962.1 5261091 5262452 D KEGG: sus:Acid_4274 serine/threonine protein kinase; SPTR: Serine/threonine protein kinase; TIGRFAM: repeat-companion domain TIGR02996; hypothetical protein 5261091..5262452 Isosphaera pallida ATCC 43644 10157745 YP_004180698.1 CDS Isop_3592 NC_014962.1 5262569 5264821 R COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterProIPR003439: IPR017940: IPR001140: IPR017871: IPR 003593; KEGG: psl:Psta_3757 ABC transporter related protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; PFAM: ABC transporter transmembrane region; ABC transporter; ABC transporter-like protein complement(5262569..5264821) Isosphaera pallida ATCC 43644 10157746 YP_004180699.1 CDS Isop_3593 NC_014962.1 5265443 5269324 D KEGG: cpv:cgd5_2180 hypothetical protein; SPTR: Large low complexity protein with proline/alanine-rich repeat; hypothetical protein 5265443..5269324 Isosphaera pallida ATCC 43644 10157747 YP_004180700.1 CDS Isop_3594 NC_014962.1 5269566 5270429 D COGs: COG3361 conserved hypothetical protein; KEGG: scl:sce2492 hypothetical protein; SPTR: Putative uncharacterized protein yqjF; PFAM: Uncharacterized conserved protein (COG2071); hypothetical protein 5269566..5270429 Isosphaera pallida ATCC 43644 10157748 YP_004180701.1 CDS Isop_3595 NC_014962.1 5270426 5271796 D COGs: COG1301 Na+/H+-dicarboxylate symporter; InterPro IPR001991: IPR018107; KEGG: lhk:LHK_01881 sodium:dicarboxylate symporter; PFAM: sodium:dicarboxylate symporter; SPTR: C4-dicarboxylate transport protein; PFAM: Sodium:dicarboxylate symporter family; sodium:dicarboxylate symporter 5270426..5271796 Isosphaera pallida ATCC 43644 10157749 YP_004180702.1 CDS Isop_3596 NC_014962.1 5271896 5272318 R KEGG: syf:Synpcc7942_1563 signal transduction inhibitor; SPTR: Signal transduction inhibitor; signal transduction inhibitor complement(5271896..5272318) Isosphaera pallida ATCC 43644 10157750 YP_004180703.1 CDS Isop_3597 NC_014962.1 5273165 5273944 D COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087: IPR017970; KEGG: plm:Plim_2575 lipolytic protein G-D-S-L family; PFAM: lipolytic protein G-D-S-L family; SPTR: Putative secreted protein; PFAM: GDSL-like Lipase/Acylhydrolase; G-D-S-L family lipolytic protein 5273165..5273944 Isosphaera pallida ATCC 43644 10157751 YP_004180704.1 CDS Isop_3598 NC_014962.1 5274626 5275069 D KEGG: psl:Psta_4523 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 5274626..5275069 Isosphaera pallida ATCC 43644 10157753 YP_004180705.1 CDS Isop_3599 NC_014962.1 5275251 5276243 D InterPro IPR012902; KEGG: psl:Psta_2737 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 5275251..5276243 Isosphaera pallida ATCC 43644 10157754 YP_004180706.1 CDS Isop_3600 NC_014962.1 5276635 5278551 D InterPro IPR019734: IPR013026: IPR001440; KEGG: mac:MA3293 hypothetical protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Putative uncharacterized protein; PFAM: Tetratricopeptide repeat; hypothetical protein 5276635..5278551 Isosphaera pallida ATCC 43644 10157755 YP_004180707.1 CDS Isop_3601 NC_014962.1 5278747 5279787 R COGs: COG2008 Threonine aldolase; InterPro IPR001597; KEGG: psl:Psta_4381 threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; PRIAM: Threonine aldolase; SPTR: L-allo-threonine aldolase; PFAM: Beta-eliminating lyase; L-threonine aldolase complement(5278747..5279787) Isosphaera pallida ATCC 43644 10157756 YP_004180708.1 CDS Isop_3602 NC_014962.1 5280300 5281748 D COGs: COG0141 Histidinol dehydrogenase; InterPro IPR012131: IPR001692; KEGG: rba:RB1584 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase; PRIAM: Histidinol dehydrogenase; SPTR: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; histidinol dehydrogenase 5280300..5281748 Isosphaera pallida ATCC 43644 10157757 YP_004180709.1 CDS Isop_3603 NC_014962.1 5281849 5282388 D COGs: COG0456 Acetyltransferase; InterPro IPR000182; KEGG: rpf:Rpic12D_2432 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family; N-acetyltransferase GCN5 5281849..5282388 Isosphaera pallida ATCC 43644 10157758 YP_004180710.1 CDS Isop_3604 NC_014962.1 5282467 5283567 D COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; InterPro IPR005861: IPR004839: IPR004838; KEGG: psl:Psta_4386 histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; SPTR: Histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; histidinol phosphate aminotransferase apoenzyme 5282467..5283567 Isosphaera pallida ATCC 43644 10157759 YP_004180711.1 CDS Isop_3605 NC_014962.1 5283702 5284322 D COGs: COG0131 Imidazoleglycerol-phosphate dehydratase; InterPro IPR000807: IPR020565; KEGG: plm:Plim_3413 imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase; PRIAM: Imidazoleglycerol-phosphate dehydratase; SPTR: Imidazoleglycerol-phosphate dehydratase; PFAM: Imidazoleglycerol-phosphate dehydratase; imidazoleglycerol-phosphate dehydratase 5283702..5284322 Isosphaera pallida ATCC 43644 10157760 YP_004180712.1 CDS Isop_3606 NC_014962.1 5284319 5285479 D KEGG: plm:Plim_1029 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein; hypothetical protein 5284319..5285479 Isosphaera pallida ATCC 43644 10157761 YP_004180713.1 CDS Isop_3607 NC_014962.1 5285523 5286821 D InterPro IPR000933; KEGG: cai:Caci_0886 alpha-L-fucosidase; SMART: glycoside hydrolase family 29 (alpha-L-fucosidase); SPTR: Alpha-L-fucosidase; PFAM: Alpha-L-fucosidase; alpha-L-fucosidase 5285523..5286821 Isosphaera pallida ATCC 43644 10157762 YP_004180714.1 CDS Isop_3608 NC_014962.1 5287091 5288056 D KEGG: dsa:Desal_0810 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 5287091..5288056 Isosphaera pallida ATCC 43644 10157763 YP_004180715.1 CDS Isop_3609 NC_014962.1 5288233 5289228 D COGs: COG1087 UDP-glucose 4-epimerase; InterPro IPR005886: IPR001509: IPR020904; KEGG: jan:Jann_4249 UDP-galactose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: UDP-galactose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase; UDP-galactose 4-epimerase 5288233..5289228 Isosphaera pallida ATCC 43644 10157764 YP_004180716.1 CDS Isop_3610 NC_014962.1 5289473 5291512 R KEGG: plm:Plim_3249 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(5289473..5291512) Isosphaera pallida ATCC 43644 10157765 YP_004180717.1 CDS Isop_3611 NC_014962.1 5291638 5292693 R COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: afr:AFE_3291 NAD-dependent epimerase/dehydratase family protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase family protein; PFAM: NAD dependent epimerase/dehydratase family; NAD-dependent epimerase/dehydratase complement(5291638..5292693) Isosphaera pallida ATCC 43644 10157766 YP_004180718.1 CDS Isop_3612 NC_014962.1 5293048 5294169 D COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: sli:Slin_0510 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase domain-containing protein 5293048..5294169 Isosphaera pallida ATCC 43644 10157767 YP_004180719.1 CDS Isop_3613 NC_014962.1 5294281 5296353 D COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789: IPR003018; KEGG: rba:RB7461 sensor kinase; PFAM: response regulator receiver; GAF domain protein; SMART: response regulator receiver; GAF domain protein; SPTR: Probable sensor kinase; PFAM: Response regulator receiver domain; GAF domain; response regulator receiver modulated GAF sensor protein 5294281..5296353 Isosphaera pallida ATCC 43644 10157768 YP_004180720.1 CDS Isop_3614 NC_014962.1 5297271 5299553 R KEGG: rba:RB12630 signal peptide; SPTR: Putative uncharacterized protein; hypothetical protein complement(5297271..5299553) Isosphaera pallida ATCC 43644 10157770 YP_004180721.1 CDS Isop_3615 NC_014962.1 5299658 5301103 R InterPro IPR010869; KEGG: rba:RB12566 sulfatase; PFAM: protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1501); hypothetical protein complement(5299658..5301103) Isosphaera pallida ATCC 43644 10157771 YP_004180722.1 CDS Isop_3616 NC_014962.1 5301126 5304497 R InterPro IPR011444; KEGG: rba:RB12567 hypothetical protein; PFAM: protein of unknown function DUF1549; SPTR: Putative uncharacterized protein; PFAM: Planctomycete cytochrome C; Protein of unknown function (DUF1549); Protein of unknown function (DUF1553); hypothetical protein complement(5301126..5304497) Isosphaera pallida ATCC 43644 10157772 YP_004180723.1 CDS Isop_3617 NC_014962.1 5305117 5307093 D InterPro IPR000276: IPR018122; KEGG: cyh:Cyan8802_3251 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 5305117..5307093 Isosphaera pallida ATCC 43644 10157773 YP_004180724.1 CDS Isop_3618 NC_014962.1 5307168 5309372 R KEGG: sti:Sthe_2169 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(5307168..5309372) Isosphaera pallida ATCC 43644 10157774 YP_004180725.1 CDS Isop_3619 NC_014962.1 5309564 5312005 D COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466: IPR000755: IPR001412; KEGG: rba:RB8687 beta-lactamase; PFAM: beta-lactamase; peptidase M15D vanX D-ala-D-ala dipeptidase; SPTR: Probable beta-lactamase; PFAM: D-ala-D-ala dipeptidase; Beta-lactamase; beta-lactamase 5309564..5312005 Isosphaera pallida ATCC 43644 10157775 YP_004180726.1 CDS Isop_3620 NC_014962.1 5312165 5312476 D KEGG: rop:ROP_23240 non-ribosomal peptide synthetase; SPTR: Non-ribosomal peptide synthetase; hypothetical protein 5312165..5312476 Isosphaera pallida ATCC 43644 10157776 YP_004180727.1 CDS Isop_3621 NC_014962.1 5312721 5313548 D COGs: COG1043 Acyl-(acyl carrier protein); InterPro IPR010137: IPR001451; KEGG: dak:DaAHT2_0859 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase; PFAM: transferase hexapeptide repeat containing protein; PRIAM:Acyl-[acyl-carrier-protein]--UDP-N-acetylgluc osamineO-acyltransferase; SPTR:Acyl-(Acyl-carrier-protein)--UDP-N-acetylgluco samineO-acyltransferase; TIGRFAM:acyl-[acyl-carrier-protein]--UDP-N-acetylgl ucosamineO-acyltransferase; TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase 5312721..5313548 Isosphaera pallida ATCC 43644 10157777 YP_004180728.1 CDS Isop_3622 NC_014962.1 5313682 5314065 R KEGG: scl:sce0619 protein kinase; SPTR: Thioredoxin reductase 1, cytoplasmic; hypothetical protein complement(5313682..5314065) Isosphaera pallida ATCC 43644 10157778 YP_004180729.1 CDS Isop_3623 NC_014962.1 5314452 5315057 D KEGG: ath:AT1G26110 hypothetical protein; SPTR: Putative uncharacterized protein F28B23.21; hypothetical protein 5314452..5315057 Isosphaera pallida ATCC 43644 10157779 YP_004180730.1 CDS Isop_3624 NC_014962.1 5315486 5319754 D InterPro IPR000601; KEGG: mar:MAE_61060 hyalin repeat-containing protein; SPTR: Hyalin repeat protein; hypothetical protein 5315486..5319754 Isosphaera pallida ATCC 43644 10157780 YP_004180731.1 CDS Isop_3625 NC_014962.1 5319791 5320747 R KEGG: fgr:FG04574.1 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(5319791..5320747) Isosphaera pallida ATCC 43644 10157781 YP_004180732.1 CDS Isop_3626 NC_014962.1 5321032 5322228 D KEGG: lil:LA_1230 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 5321032..5322228 Isosphaera pallida ATCC 43644 10157782 YP_004180733.1 CDS Isop_3627 NC_014962.1 5322294 5322563 D KEGG: rrs:RoseRS_4066 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 5322294..5322563 Isosphaera pallida ATCC 43644 10157783 YP_004180734.1 CDS Isop_3628 NC_014962.1 5323242 5325404 D COGs: COG0058 Glucan phosphorylase; InterPro IPR011834: IPR000811; KEGG: psl:Psta_1121 alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; PRIAM: Phosphorylase; SPTR: Alpha-glucan phosphorylase; TIGRFAM: alpha-glucan phosphorylase; PFAM: Carbohydrate phosphorylase; Protein of unknown function (DUF3417); TIGRFAM: alpha-glucan phosphorylases; maltodextrin phosphorylase 5323242..5325404 Isosphaera pallida ATCC 43644 10157784 YP_004180735.1 CDS Isop_3629 NC_014962.1 5325605 5327296 D COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017442: IPR017441: IPR008271: IPR 020635: IPR002290; KEGG: plm:Plim_0821 serine/threonine protein kinase-related protein; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase-related protein; PFAM: Protein kinase domain; serine/threonine protein kinase 5325605..5327296 Isosphaera pallida ATCC 43644 10157785 YP_004180736.1 CDS Isop_3630 NC_014962.1 5327786 5328151 D KEGG: afo:Afer_1166 prevent-host-death family protein; SPTR: Prevent-host-death family protein; PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein; hypothetical protein 5327786..5328151 Isosphaera pallida ATCC 43644 10157786 YP_004180737.1 CDS Isop_3631 NC_014962.1 5328417 5329685 R COGs: COG2242 Precorrin-6B methylase 2; InterProIPR012818: IPR014008: IPR006342: IPR006365: IPR 000878: IPR007848; KEGG: psl:Psta_2973 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; methyltransferase small; PRIAM: Precorrin-6Y C(5,15)-methyltransferase (decarboxylating); SPTR: Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit; TIGRFAM: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; methyltransferase FkbM family; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; methyltransferase, FkbM family; precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6y C5,15-methyltransferase subunit CbiT complement(5328417..5329685) Isosphaera pallida ATCC 43644 10157787 YP_004180738.1 CDS Isop_3632 NC_014962.1 5330490 5330915 R KEGG: ote:Oter_2039 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(5330490..5330915) Isosphaera pallida ATCC 43644 10157788 YP_004180739.1 CDS Isop_3633 NC_014962.1 5331164 5332435 D COGs: COG0402 Cytosine deaminase and related metal-dependent hydrolase; InterPro IPR006680; KEGG: hoh:Hoch_5972 guanine deaminase; PFAM: amidohydrolase; SPTR: Guanine deaminase; PFAM: Amidohydrolase family; TIGRFAM: guanine deaminase; amidohydrolase 5331164..5332435 Isosphaera pallida ATCC 43644 10157789 YP_004180740.1 CDS Isop_3634 NC_014962.1 5332885 5333319 R COGs: COG0824 thioesterase; InterPro IPR006684: IPR006683; KEGG: plm:Plim_2936 thioesterase superfamily protein; PFAM: thioesterase superfamily protein; SPTR: Putative uncharacterized protein; PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; thioesterase superfamily protein complement(5332885..5333319) Isosphaera pallida ATCC 43644 10157790 YP_004180741.1 CDS Isop_3635 NC_014962.1 5333516 5334058 R KEGG: cre:CHLREDRAFT_195506 protein with ARF GTPase-activating domain; SPTR: Protein with ARF GTPase-activating domain; hypothetical protein complement(5333516..5334058) Isosphaera pallida ATCC 43644 10157791 YP_004180742.1 CDS Isop_3636 NC_014962.1 5334904 5337435 D COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017442: IPR008271: IPR020635: IPR 002290; KEGG: psl:Psta_4044 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase; PFAM: Protein kinase domain; serine/threonine protein kinase 5334904..5337435 Isosphaera pallida ATCC 43644 10157792 YP_004180743.1 CDS Isop_3637 NC_014962.1 5337507 5339048 R COGs: COG0515 Serine/threonine protein kinase; InterProIPR000719: IPR017442: IPR017441: IPR008271: IPR 020635: IPR002290; KEGG: fre:Franean1_0134 serine/threonine protein kinase with PASTA sensor(s); PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine protein kinase with PASTA sensor(S); PFAM: Protein kinase domain; serine/threonine protein kinase complement(5337507..5339048) Isosphaera pallida ATCC 43644 10157793 YP_004180744.1 CDS Isop_3638 NC_014962.1 5339428 5340663 R COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: sli:Slin_1433 protein of unknown function DUF323; PFAM: protein of unknown function DUF323; SPTR: Putative uncharacterized protein; PFAM: Formylglycine-generating sulfatase enzyme; hypothetical protein complement(5339428..5340663) Isosphaera pallida ATCC 43644 10157794 YP_004180745.1 CDS Isop_3639 NC_014962.1 5340787 5342541 R COGs: COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N); InterPro IPR010096: IPR001750; KEGG: plm:Plim_3870 proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: Proton-translocating NADH-quinone oxidoreductase, chain N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; proton-translocating NADH-quinone oxidoreductase subunit N complement(5340787..5342541) Isosphaera pallida ATCC 43644 10157795 YP_004180746.1 CDS Isop_3640 NC_014962.1 5342650 5344320 R COGs: COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); InterPro IPR010227: IPR001750: IPR003918; KEGG: psl:Psta_0731 proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); SPTR: Proton-translocating NADH-quinone oxidoreductase, chain M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; proton-translocating NADH-quinone oxidoreductase subunit M complement(5342650..5344320) Isosphaera pallida ATCC 43644 10157796 YP_004180747.1 CDS Isop_3641 NC_014962.1 5344383 5346437 R COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit; InterProIPR001516: IPR001750: IPR003945: IPR003916: IPR 018393; KEGG: plm:Plim_3868 proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; SPTR: Proton-translocating NADH-quinone oxidoreductase, chain L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; proton-translocating NADH-quinone oxidoreductase subunit L complement(5344383..5346437) Isosphaera pallida ATCC 43644 10157797 YP_004180748.1 CDS Isop_3642 NC_014962.1 5346430 5346888 R COGs: COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K); InterPro IPR001133; KEGG: psl:Psta_0733 NADH-ubiquinone oxidoreductase chain 4L; PFAM: NADH-ubiquinone oxidoreductase chain 4L; SPTR: NADH-ubiquinone oxidoreductase chain 4L; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; NADH-ubiquinone oxidoreductase chain 4L complement(5346430..5346888) Isosphaera pallida ATCC 43644 10157798 YP_004180749.1 CDS Isop_3643 NC_014962.1 5347006 5347983 R COGs: COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J); InterPro IPR001457; KEGG: psl:Psta_0734 NADH-ubiquinone/plastoquinone oxidoreductase chain 6; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; SPTR: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 complement(5347006..5347983) Isosphaera pallida ATCC 43644 10157799 YP_004180750.1 CDS Isop_3644 NC_014962.1 5347980 5348585 R COGs: COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); InterPro IPR017900: IPR017896: IPR010226; KEGG: psl:Psta_0735 NADH-quinone oxidoreductase, chain I; SPTR: NADH-quinone oxidoreductase subunit I; TIGRFAM: NADH-quinone oxidoreductase, chain I; PFAM: 4Fe-4S binding domain; TIGRFAM: NADH-quinone oxidoreductase, chain I; NADH dehydrogenase subunit I complement(5347980..5348585) Isosphaera pallida ATCC 43644 10157800 YP_004180751.1 CDS Isop_3645 NC_014962.1 5348734 5349813 R COGs: COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H); InterPro IPR018086: IPR001694; KEGG: plm:Plim_3864 NADH dehydrogenase (quinone); PFAM: respiratory-chain NADH dehydrogenase subunit 1; SPTR: NADH dehydrogenase (Quinone); PFAM: NADH dehydrogenase; NADH dehydrogenase subunit H complement(5348734..5349813) Isosphaera pallida ATCC 43644 10157801 YP_004180752.1 CDS Isop_3646 NC_014962.1 5349919 5351703 R COGs: COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); InterProIPR000283: IPR001041: IPR019574: IPR006963: IPR 006656; KEGG: psl:Psta_0737 NADH dehydrogenase (ubiquinone); PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; SPTR: NADH dehydrogenase (Ubiquinone); PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Molybdopterin oxidoreductase Fe4S4 domain; NADH:ubiquinone oxidoreductase subunit G, iron-sulfur-binding protein complement(5349919..5351703) Isosphaera pallida ATCC 43644 10157802 YP_004180753.1 CDS Isop_3647 NC_014962.1 5351894 5353321 R COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterProIPR001949: IPR011538: IPR019554: IPR019575: IPR 011537; KEGG: plm:Plim_3862 NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH-quinone oxidoreductase, F subunit; TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: NADH-quinone oxidoreductase, F subunit; NADH dehydrogenase subunit F complement(5351894..5353321) Isosphaera pallida ATCC 43644 10157803 YP_004180754.1 CDS Isop_3648 NC_014962.1 5354033 5354644 D KEGG: vha:VIBHAR_01395 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 5354033..5354644 Isosphaera pallida ATCC 43644 10157804 YP_004180755.1 CDS Isop_3649 NC_014962.1 5354926 5355885 D COGs: COG0657 Esterase/lipase; KEGG: psl:Psta_3524 exported endo-1,4-beta-xylanase; SPTR: Xylanase; PFAM: Prolyl oligopeptidase family; alpha/beta hydrolase fold; exported endo-1,4-beta-xylanase 5354926..5355885 Isosphaera pallida ATCC 43644 10157805 YP_004180756.1 CDS Isop_3650 NC_014962.1 5355882 5357039 D COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase; InterPro IPR013154: IPR013149: IPR017743; KEGG: psl:Psta_3166 phosphonate catabolism associated alcohol dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; SPTR: Phosphonate catabolism associated alcohol dehydrogenase; TIGRFAM: phosphonate catabolism associated alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: putative phosphonate catabolism associated alcohol dehydrogenase; phosphonate catabolism associated alcohol dehydrogenase 5355882..5357039 Isosphaera pallida ATCC 43644 10157806 YP_004180757.1 CDS Isop_3651 NC_014962.1 5357118 5357294 D hypothetical protein 5357118..5357294 Isosphaera pallida ATCC 43644 10157807 YP_004180758.1 CDS Isop_3653 NC_014962.1 5357730 5358509 D COGs: COG3836 2 4-dihydroxyhept-2-ene-1 7-dioic acid aldolase; InterPro IPR005000; KEGG: psl:Psta_0796 HpcH/HpaI aldolase; PFAM: HpcH/HpaI aldolase; SPTR: HpcH/HpaI aldolase; PFAM: HpcH/HpaI aldolase/citrate lyase family; HpcH/HpaI aldolase 5357730..5358509 Isosphaera pallida ATCC 43644 10157809 YP_004180759.1 CDS Isop_3654 NC_014962.1 5358721 5359092 D KEGG: rpc:RPC_0738 Sel1; SPTR: Putative uncharacterized protein; hypothetical protein 5358721..5359092 Isosphaera pallida ATCC 43644 10157810 YP_004180760.1 CDS Isop_3655 NC_014962.1 5359174 5360118 D KEGG: vcj:VCD_001487 valine--pyruvate transaminase; SPTR: Valine-pyruvate aminotransferase; hypothetical protein 5359174..5360118 Isosphaera pallida ATCC 43644 10157811 YP_004180761.1 CDS Isop_3656 NC_014962.1 5360564 5361181 D InterPro IPR010496; KEGG: psl:Psta_2956 membrane-bound dehydrogenase domain protein; PFAM: protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF1080); hypothetical protein 5360564..5361181 Isosphaera pallida ATCC 43644 10157812 YP_004180762.1 CDS Isop_3657 NC_014962.1 5361261 5362700 D KEGG: cag:Cagg_0822 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 5361261..5362700 Isosphaera pallida ATCC 43644 10157813 YP_004180763.1 CDS Isop_3658 NC_014962.1 5362833 5364872 R InterPro IPR001434; KEGG: psl:Psta_4233 conserved repeat domain protein; SPTR: Putative uncharacterized protein; TIGRFAM: conserved repeat domain protein; PFAM: Domain of unknown function DUF11; TIGRFAM: conserved repeat domain; hypothetical protein complement(5362833..5364872) Isosphaera pallida ATCC 43644 10157814 YP_004180764.1 CDS Isop_3659 NC_014962.1 5365304 5366257 R KEGG: plm:Plim_0397 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(5365304..5366257) Isosphaera pallida ATCC 43644 10157815 YP_004180765.1 CDS Isop_3660 NC_014962.1 5366211 5366375 R KEGG: cfa:611798 D4, zinc and double PHD fingers, family 3; D4, zinc and double PHD fingers, family 3 complement(5366211..5366375) Isosphaera pallida ATCC 43644 10157816 YP_004180766.1 CDS Isop_3661 NC_014962.1 5366634 5367629 D KEGG: plm:Plim_0396 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 5366634..5367629 Isosphaera pallida ATCC 43644 10157817 YP_004180767.1 CDS Isop_3662 NC_014962.1 5367837 5368745 R COGs: COG1102 Cytidylate kinase; KEGG: dat:HRM2_42640 Cmk3; SPTR: Cmk3; hypothetical protein complement(5367837..5368745) Isosphaera pallida ATCC 43644 10157818 YP_004180768.1 CDS Isop_3663 NC_014962.1 5369292 5369624 D COGs: COG0316 conserved hypothetical protein; InterPro IPR017870: IPR000361: IPR016092; KEGG: plm:Plim_2978 iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; SPTR: Iron-sulfur cluster assembly accessory protein; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein; iron-sulfur cluster assembly accessory protein 5369292..5369624 Isosphaera pallida ATCC 43644 10157819 YP_004180769.1 CDS Isop_3664 NC_014962.1 5369882 5370886 R COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR006140: IPR006139; KEGG: psl:Psta_2972 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; SPTR: D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein complement(5369882..5370886) Isosphaera pallida ATCC 43644 10157820 YP_004180770.1 CDS Isop_3665 NC_014962.1 5370945 5372267 R COGs: COG0673 dehydrogenase and related protein; InterPro IPR017909: IPR000683: IPR006311; KEGG: dfe:Dfer_4144 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; SPTR: Probable NADH-dependent dehydrogenase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; oxidoreductase domain-containing protein complement(5370945..5372267) Isosphaera pallida ATCC 43644 10157821 YP_004180771.1 CDS Isop_3666 NC_014962.1 5372629 5373096 R KEGG: plm:Plim_0457 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(5372629..5373096) Isosphaera pallida ATCC 43644 10157822 YP_004180772.1 CDS Isop_3667 NC_014962.1 5379542 5380024 D KEGG: tbr:Tb10.70.0140 ATP-dependent DEAD/H RNA helicase HEL64; SPTR: ATP-dependent DEAD/H RNA helicase HEL64, putative; hypothetical protein 5379542..5380024 Isosphaera pallida ATCC 43644 10157826 YP_004180773.1 CDS Isop_3668 NC_014962.1 5380087 5381229 D KEGG: bch:Bcen2424_0447 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 5380087..5381229 Isosphaera pallida ATCC 43644 10157827 YP_004180774.1 CDS Isop_3669 NC_014962.1 5381151 5382707 R InterPro IPR003115: IPR002052: IPR002941; KEGG: cyt:cce_3783 hypothetical protein; PFAM: ParB domain protein nuclease; DNA methylase N-4/N-6 domain protein; SMART: ParB domain protein nuclease; SPTR: Similar to tr|Q978H7|Q978H7; PFAM: ParB-like nuclease domain; DNA methylase; TIGRFAM: ParB-like partition proteins; ParB domain-containing protein nuclease complement(5381151..5382707) Isosphaera pallida ATCC 43644 10157828 YP_004180775.1 CDS Isop_3670 NC_014962.1 5382909 5383739 D COGs: COG0134 Indole-3-glycerol phosphate synthase; InterPro IPR001468: IPR013798; KEGG: psl:Psta_0336 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; PRIAM: Indole-3-glycerol-phosphate synthase; SPTR: Indole-3-glycerol phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; indole-3-glycerol phosphate synthase 5382909..5383739 Isosphaera pallida ATCC 43644 10157829 YP_004180776.1 CDS Isop_3671 NC_014962.1 5383724 5384665 R COGs: COG1624 conserved hypothetical protein; InterPro IPR014499: IPR003390; KEGG: psl:Psta_3542 protein of unknown function DUF147; PFAM: protein of unknown function DUF147; SPTR: Putative uncharacterized protein; PFAM: DisA bacterial checkpoint controller nucleotide-binding; hypothetical protein complement(5383724..5384665) Isosphaera pallida ATCC 43644 10157830 YP_004180777.1 CDS Isop_3672 NC_014962.1 5384858 5386165 R InterPro IPR005819; KEGG: pcs:Pc22g03720 Pc22g03720; SPTR: Pc22g03720 protein; hypothetical protein complement(5384858..5386165) Isosphaera pallida ATCC 43644 10157831 YP_004180778.1 CDS Isop_3673 NC_014962.1 5386320 5387378 R COGs: COG0547 Anthranilate phosphoribosyltransferase; InterPro IPR017459: IPR000312: IPR005940; KEGG: tro:trd_0104 anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; PRIAM: Anthranilate phosphoribosyltransferase; SPTR: Anthranilate phosphoribosyltransferase; TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase; anthranilate phosphoribosyltransferase complement(5386320..5387378) Isosphaera pallida ATCC 43644 10157832 YP_004180779.1 CDS Isop_3674 NC_014962.1 5387539 5389266 R COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478: IPR001254: IPR001940; KEGG: psl:Psta_2163 2-alkenal reductase; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: 2-alkenal reductase; PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); peptidase S1 and S6 chymotrypsin/Hap complement(5387539..5389266) Isosphaera pallida ATCC 43644 10157833 YP_004180780.1 CDS Isop_3675 NC_014962.1 5389809 5390291 R COGs: COG1734 DnaK suppressor protein; InterPro IPR020458: IPR000962; KEGG: psl:Psta_2164 transcriptional regulator, TraR/DksA family; SPTR: Transcriptional regulator, TraR/DksA family; PFAM: Prokaryotic dksA/traR C4-type zinc finger; TraR/DksA family transcriptional regulator complement(5389809..5390291) Isosphaera pallida ATCC 43644 10157834 YP_004180781.1 CDS Isop_3676 NC_014962.1 5391053 5394055 R COGs: COG0457 FOG: TPR repeat; InterPro IPR019734: IPR013026: IPR001440; KEGG: pcs:Pc22g03720 Pc22g03720; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: Pc22g03720 protein; PFAM: Tetratricopeptide repeat; hypothetical protein complement(5391053..5394055) Isosphaera pallida ATCC 43644 10157835 YP_004180782.1 CDS Isop_3677 NC_014962.1 5394214 5394651 R COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789; KEGG: ter:Tery_3248 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator receiver protein; PFAM: Response regulator receiver domain; response regulator receiver protein complement(5394214..5394651) Isosphaera pallida ATCC 43644 10157836 YP_004180783.1 CDS Isop_3678 NC_014962.1 5394999 5395760 R InterPro IPR010496; KEGG: dfe:Dfer_0069 protein of unknown function DUF1080; PFAM: protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF1080); hypothetical protein complement(5394999..5395760) Isosphaera pallida ATCC 43644 10157837 YP_004180784.1 CDS Isop_3679 NC_014962.1 5395757 5397202 R COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: ava:Ava_4240 twin-arginine translocation pathway signal; PFAM: sulfatase; SPTR: Twin-arginine translocation pathway signal; PFAM: Sulfatase; sulfatase complement(5395757..5397202) Isosphaera pallida ATCC 43644 10157838 YP_004180785.1 CDS Isop_3680 NC_014962.1 5397545 5399677 D COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: chl:Chy400_1467 sulfatase; PFAM: sulfatase; SPTR: Sulfatase; PFAM: Sulfatase; sulfatase 5397545..5399677 Isosphaera pallida ATCC 43644 10157839 YP_004180786.1 CDS Isop_3681 NC_014962.1 5400249 5400740 D COGs: COG0245 2C-methyl-D-erythritol 2 4-cyclodiphosphate synthase; InterPro IPR020555: IPR003526; KEGG: bpa:BPP3365 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase; SPTR: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: YgbB family; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 5400249..5400740 Isosphaera pallida ATCC 43644 10157840 YP_004180787.1 CDS Isop_3682 NC_014962.1 5401040 5402533 D COGs: COG0215 Cysteinyl-tRNA synthetase; InterPro IPR015803: IPR015273: IPR002308; KEGG: psl:Psta_3589 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia; Cysteinyl-tRNA synthetase class Ia DALR; PRIAM: Cysteine--tRNA ligase; SPTR: Cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase; cysteinyl-tRNA synthetase 5401040..5402533 Isosphaera pallida ATCC 43644 10157841 YP_004180788.1 CDS Isop_3683 NC_014962.1 5402658 5403323 D COGs: COG0817 Holliday junction resolvasome endonuclease subunit; InterPro IPR020563: IPR002176; KEGG: psl:Psta_3588 crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC; PRIAM: Crossover junction endodeoxyribonuclease; SPTR: Crossover junction endodeoxyribonuclease ruvC; PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; Crossover junction endodeoxyribonuclease 5402658..5403323 Isosphaera pallida ATCC 43644 10157842 YP_004180789.1 CDS Isop_3684 NC_014962.1 5403448 5404587 D COGs: COG2022 Uncharacterized protein of thiazole biosynthesis; InterPro IPR003749: IPR008867: IPR010035; KEGG: plm:Plim_3633 thiazole biosynthesis family protein; PFAM: thiazole biosynthesis family protein; thiamineS protein; SPTR: Thiazole synthase; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: ThiS family; Thiazole biosynthesis protein ThiG; TIGRFAM: thiamine biosynthesis protein ThiS; thiazole-phosphate synthase 5403448..5404587 Isosphaera pallida ATCC 43644 10157843 YP_004180790.1 CDS Isop_3685 NC_014962.1 5404861 5405016 D KEGG: tet:TTHERM_00046210 Adenylate and Guanylate cyclase catalytic domain containing protein; SPTR: Adenylate and Guanylate cyclase catalytic domain containing protein; hypothetical protein 5404861..5405016 Isosphaera pallida ATCC 43644 10157844 YP_004180791.1 CDS Isop_3686 NC_014962.1 5405521 5406567 D COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR001789; KEGG: lch:Lcho_3971 response regulator receiver protein; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: Response regulator receiver protein; PFAM: Response regulator receiver domain; response regulator receiver protein 5405521..5406567 Isosphaera pallida ATCC 43644 10157845 YP_004180792.1 CDS Isop_3687 NC_014962.1 5406808 5407362 D KEGG: aor:AO090011000012 hypothetical protein; SPTR: Predicted protein; hypothetical protein 5406808..5407362 Isosphaera pallida ATCC 43644 10157846 YP_004180793.1 CDS Isop_3688 NC_014962.1 5407819 5410761 D COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR019734: IPR002545: IPR013026; KEGG: cel:ZK84.1 hypothetical protein; PFAM: CheW domain protein; SMART: CheW domain protein; Tetratricopeptide repeat; SPTR: Putative uncharacterized protein; PFAM: CheW-like domain; CheW protein 5407819..5410761 Isosphaera pallida ATCC 43644 10157847 YP_004180794.1 CDS Isop_3689 NC_014962.1 5410889 5413198 D COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660: IPR004089; KEGG: pap:PSPA7_0511 twitching motility protein PilJ; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SPTR: Methyl-accepting chemotaxis sensory transducer; PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; methyl-accepting chemotaxis sensory transducer 5410889..5413198 Isosphaera pallida ATCC 43644 10157848 YP_004180795.1 CDS Isop_3690 NC_014962.1 5413532 5418409 D COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterProIPR008207: IPR003594: IPR002545: IPR001789: IPR 005467: IPR004105: IPR004358; KEGG: aeh:Mlg_0359 CheA signal transduction histidine kinases; PFAM: response regulator receiver; CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; SMART: response regulator receiver; ATP-binding region ATPase domain protein; Hpt domain protein; CheW domain protein; SPTR: CheA signal transduction histidine kinase; PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; Signal transducing histidine kinase, homodimeric domain; Hpt domain; CheA signal transduction histidine kinase 5413532..5418409 Isosphaera pallida ATCC 43644 10157849 YP_004180796.1 CDS Isop_3691 NC_014962.1 5418549 5419868 D InterPro IPR002545; KEGG: met:M446_2054 CheW protein; PFAM: CheW domain protein; SPTR: CheW protein; PFAM: CheW-like domain; CheW domain-containing protein 5418549..5419868 Isosphaera pallida ATCC 43644 10157850 YP_004180797.1 CDS Isop_3692 NC_014962.1 5420061 5421269 D COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: cyc:PCC7424_1248 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1; PFAM: Domain of unknown function (DUF3495); Glycosyl transferases group 1; group 1 glycosyl transferase 5420061..5421269 Isosphaera pallida ATCC 43644 10157851 YP_004180798.1 CDS Isop_3693 NC_014962.1 5421325 5423013 R COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR017985; KEGG: rcp:RCAP_rcc02544 ABC transporter substrate-binding protein; SPTR: ABC transporter, substrate-binding protein; PFAM: Bacterial extracellular solute-binding protein; hypothetical protein complement(5421325..5423013) Isosphaera pallida ATCC 43644 10157852 YP_004180799.1 CDS Isop_3694 NC_014962.1 5423231 5425039 R KEGG: cts:Ctha_0316 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(5423231..5425039) Isosphaera pallida ATCC 43644 10157853 YP_004180800.1 CDS Isop_3695 NC_014962.1 5425196 5428102 R COGs: COG1277 ABC-type transport system involved in multi-copper enzyme maturation permease component; InterPro IPR019196; KEGG: cts:Ctha_0317 putative permease of ABC transporter; PFAM: ABC-type uncharacterised transport system; SPTR: Putative permease of ABC transporter; PFAM: ABC-type uncharacterized transport system; ABC transporter complement(5425196..5428102) Isosphaera pallida ATCC 43644 10157854 YP_004180801.1 CDS Isop_3696 NC_014962.1 5428372 5429100 R COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593: IPR003439; KEGG: cts:Ctha_0318 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter; ABC transporter-like protein complement(5428372..5429100) Isosphaera pallida ATCC 43644 10157855 YP_004180802.1 CDS Isop_3697 NC_014962.1 5429334 5430044 R COGs: COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain); InterPro IPR006367; KEGG: gsu:GSU3282 siroheme synthase; SPTR: Siroheme synthase, N-terminal domain protein; TIGRFAM: siroheme synthase; TIGRFAM: siroheme synthase, N-terminal domain; siroheme synthase complement(5429334..5430044) Isosphaera pallida ATCC 43644 10157856 YP_004180803.1 CDS Isop_3698 NC_014962.1 5430228 5430587 R KEGG: scl:sce3364 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(5430228..5430587) Isosphaera pallida ATCC 43644 10157857 YP_004180804.1 CDS Isop_3699 NC_014962.1 5430715 5431923 D COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR011547; KEGG: plm:Plim_2933 sulphate transporter; PFAM: sulphate transporter; SPTR: Sulphate transporter; PFAM: Sulfate transporter family; sulfate transporter 5430715..5431923 Isosphaera pallida ATCC 43644 10157858 YP_004180805.1 CDS Isop_3700 NC_014962.1 5432040 5432462 D COGs: COG0432 conserved hypothetical protein; InterPro IPR001602; KEGG: plm:Plim_0254 protein of unknown function UPF0047; PFAM: protein of unknown function UPF0047; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme; hypothetical protein 5432040..5432462 Isosphaera pallida ATCC 43644 10157859 YP_004180806.1 CDS Isop_3701 NC_014962.1 5432762 5434135 D COGs: COG0673 dehydrogenase and related protein; InterPro IPR017909: IPR000683: IPR006311; KEGG: plm:Plim_2857 oxidoreductase domain protein; PFAM: oxidoreductase domain protein; SPTR: Oxidoreductase domain protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; oxidoreductase domain-containing protein 5432762..5434135 Isosphaera pallida ATCC 43644 10157860 YP_004180807.1 CDS Isop_3702 NC_014962.1 5434350 5435342 D KEGG: ote:Oter_0353 hypothetical protein; SPTR: Dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein; hypothetical protein 5434350..5435342 Isosphaera pallida ATCC 43644 10157861 YP_004180808.1 CDS Isop_3703 NC_014962.1 5435896 5436930 D COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: rca:Rcas_0800 glycosyl transferase family protein; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2; family 2 glycosyl transferase 5435896..5436930 Isosphaera pallida ATCC 43644 10157862 YP_004180809.1 CDS Isop_3704 NC_014962.1 5436927 5437721 D COGs: COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase; InterPro IPR013217; KEGG: tbi:Tbis_2366 type 11 methyltransferase; PFAM: Methyltransferase type 12; SPTR: Methyltransferase type 11; PFAM: Methyltransferase domain; type 12 methyltransferase 5436927..5437721 Isosphaera pallida ATCC 43644 10157863 YP_004180810.1 CDS Isop_3705 NC_014962.1 5437945 5439333 D KEGG: psl:Psta_3986 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 5437945..5439333 Isosphaera pallida ATCC 43644 10157864 YP_004180811.1 CDS Isop_3706 NC_014962.1 5439330 5439998 D COGs: COG3326 membrane protein; InterPro IPR011129: IPR002059: IPR010718; KEGG: reh:PHG169 hypothetical protein; PFAM: Cold-shock protein DNA-binding; protein of unknown function DUF1294; SMART: Cold shock protein; SPTR: Putative uncharacterized protein; PFAM: 'Cold-shock' DNA-binding domain; Protein of unknown function (DUF1294); cold-shock DNA-binding domain-containing protein 5439330..5439998 Isosphaera pallida ATCC 43644 10157865 YP_004180812.1 CDS Isop_3707 NC_014962.1 5440492 5442453 D COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006089: IPR006092: IPR006091: IPR006090; KEGG: psl:Psta_3650 acyl-CoA dehydrogenase domain protein; PFAM: acyl-CoA dehydrogenase domain-containing protein; SPTR: Acyl-CoA dehydrogenase domain protein; PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; acyl-CoA dehydrogenase domain-containing protein 5440492..5442453 Isosphaera pallida ATCC 43644 10157866 YP_004180813.1 CDS Isop_3708 NC_014962.1 5442797 5442943 D KEGG: gdj:Gdia_0284 Smr protein/MutS2; SPTR: Putative small MutS related protein; hypothetical protein 5442797..5442943 Isosphaera pallida ATCC 43644 10157867 YP_004180814.1 CDS Isop_3709 NC_014962.1 5443249 5444379 D InterPro IPR012902; KEGG: plm:Plim_4238 protein of unknown function DUF1559; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic N-terminal methylation motif; Protein of unknown function (DUF1559); TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 5443249..5444379 Isosphaera pallida ATCC 43644 10157868 YP_004180815.1 CDS Isop_3710 NC_014962.1 5444503 5444727 D KEGG: cac:CA_C3325 periplasmic amino acid binding protein; SPTR: Periplasmic amino acid binding protein; hypothetical protein 5444503..5444727 Isosphaera pallida ATCC 43644 10157869 YP_004180816.1 CDS Isop_3711 NC_014962.1 5444833 5446515 D InterPro IPR006652; KEGG: plm:Plim_2580 kelch repeat-containing protein; PFAM: Kelch repeat type 1-containing protein; SMART: Kelch repeat type 1-containing protein; SPTR: Putative uncharacterized protein; PFAM: Kelch motif; Kelch repeat type 1-containing protein 5444833..5446515 Isosphaera pallida ATCC 43644 10157870 YP_004180817.1 CDS Isop_3712 NC_014962.1 5446682 5447788 R COGs: COG1994 Zn-dependent protease; InterPro IPR000644: IPR016483: IPR008915; KEGG: rmr:Rmar_0832 peptidase M50; PFAM: peptidase M50; CBS domain containing protein; SPTR: Peptidase M50; PFAM: CBS domain; Peptidase family M50; peptidase M50 complement(5446682..5447788) Isosphaera pallida ATCC 43644 10157871 YP_004180818.1 CDS Isop_3713 NC_014962.1 5447928 5448758 R COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789; KEGG: rba:RB5479 sensory transduction histidine kinase; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: PAS domain S-box; PFAM: Response regulator receiver domain; response regulator receiver protein complement(5447928..5448758) Isosphaera pallida ATCC 43644 10157872 YP_004180819.1 CDS Isop_3714 NC_014962.1 5449214 5450443 R COGs: COG4963 Flp pilus assembly protein ATPase CpaE; KEGG: sfu:Sfum_1497 response regulator receiver protein; SPTR: Response regulator receiver protein; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; hypothetical protein complement(5449214..5450443) Isosphaera pallida ATCC 43644 10157873 YP_004180820.1 CDS Isop_3715 NC_014962.1 5450525 5450668 R KEGG: tbd:Tbd_2116 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(5450525..5450668) Isosphaera pallida ATCC 43644 10157874 YP_004180821.1 CDS Isop_3716 NC_014962.1 5450867 5451472 R KEGG: mno:Mnod_7391 sodium/hydrogen exchanger; SPTR: Putative uncharacterized protein; hypothetical protein complement(5450867..5451472) Isosphaera pallida ATCC 43644 10157875 YP_004180822.1 CDS Isop_3717 NC_014962.1 5451523 5452872 R KEGG: cci:CC1G_13638 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(5451523..5452872) Isosphaera pallida ATCC 43644 10157876 YP_004180823.1 CDS Isop_3718 NC_014962.1 5453089 5454021 R COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR001395; KEGG: min:Minf_1294 aldo/keto reductase family enzyme; PFAM: aldo/keto reductase; SPTR: Aldo/keto reductase family enzyme; PFAM: Aldo/keto reductase family; aldo/keto reductase complement(5453089..5454021) Isosphaera pallida ATCC 43644 10157877 YP_004180824.1 CDS Isop_3719 NC_014962.1 5455194 5456603 R KEGG: rca:Rcas_0215 TPR repeat-containing protein; SPTR: Tetratricopeptide TPR_2 repeat protein; hypothetical protein complement(5455194..5456603) Isosphaera pallida ATCC 43644 10157878 YP_004180825.1 CDS Isop_3720 NC_014962.1 5457202 5458479 D KEGG: stp:Strop_1530 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 5457202..5458479 Isosphaera pallida ATCC 43644 10157879 YP_004180826.1 CDS Isop_3721 NC_014962.1 5458530 5459411 R COGs: COG0602 Organic radical activating protein; InterPro IPR007197; KEGG: nde:NIDE0244 putative radical-activating enzyme, radical SAM superfamily; PFAM: Radical SAM domain protein; SPTR: Radical SAM domain protein; PFAM: Radical SAM superfamily; radical SAM protein complement(5458530..5459411) Isosphaera pallida ATCC 43644 10157880 YP_004180827.1 CDS Isop_3722 NC_014962.1 5459472 5460227 D InterPro IPR001647; KEGG: psl:Psta_1008 transcriptional regulator, TetR family; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator, TetR family; PFAM: Bacterial regulatory proteins, tetR family; regulatory protein TetR 5459472..5460227 Isosphaera pallida ATCC 43644 10157881 YP_004180828.1 CDS Isop_3723 NC_014962.1 5460345 5461772 D COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: amr:AM1_A0123 RND family efflux transporter MFP subunit; PFAM: secretion protein HlyD family protein; SPTR: Putative uncharacterized protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; RND family efflux transporter MFP subunit 5460345..5461772 Isosphaera pallida ATCC 43644 10157882 YP_004180829.1 CDS Isop_3724 NC_014962.1 5461956 5465375 D COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR000731: IPR001036; KEGG: mar:MAE_27670 RND multidrug efflux transporter; PFAM: acriflavin resistance protein; SPTR: RND multidrug efflux transporter; PFAM: AcrB/AcrD/AcrF family; acriflavin resistance protein 5461956..5465375 Isosphaera pallida ATCC 43644 10157883 YP_004180830.1 CDS Isop_3725 NC_014962.1 5465551 5466222 D COGs: COG1335 Amidase related to nicotinamidase; InterPro IPR000868; KEGG: dar:Daro_0055 isochorismatase hydrolase; PFAM: isochorismatase hydrolase; SPTR: Isochorismatase hydrolase; PFAM: Isochorismatase family; isochorismatase hydrolase 5465551..5466222 Isosphaera pallida ATCC 43644 10157884 YP_004180831.1 CDS Isop_3726 NC_014962.1 5466230 5467399 D COGs: COG0075 Serine-pyruvate aminotransferase/ aspartate aminotransferase; InterPro IPR020578: IPR000192; KEGG: psl:Psta_2949 aminotransferase class V; PFAM: aminotransferase class V; SPTR: Aminotransferase class V; PFAM: Aminotransferase class-V; alanine-glyoxylate aminotransferase apoenzyme 5466230..5467399 Isosphaera pallida ATCC 43644 10157885 YP_004180832.1 CDS Isop_3727 NC_014962.1 5467549 5468175 R KEGG: pbe:PB001026.00.0 circumsporozoite (CS) protein; SPTR: Circumsporozoite (CS) protein, putative; hypothetical protein complement(5467549..5468175) Isosphaera pallida ATCC 43644 10157886 YP_004180833.1 CDS Isop_3728 NC_014962.1 5468862 5469824 D COGs: COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase; InterPro IPR004424: IPR006204: IPR013750; KEGG: psl:Psta_0133 4-diphosphocytidyl-2C-methyl-D-erythritolkinase; PFAM: GHMP kinase; GHMP kinase domain protein; PRIAM: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; SPTR: 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 5468862..5469824 Isosphaera pallida ATCC 43644 10157887 YP_004180834.1 CDS Isop_3729 NC_014962.1 5469839 5470612 D COGs: COG2088 Uncharacterized protein involved in the regulation of septum location; InterPro IPR007170; KEGG: psl:Psta_0132 SpoVG family protein; PFAM: SpoVG family protein; SPTR: SpoVG family protein; PFAM: SpoVG; SpoVG family protein 5469839..5470612 Isosphaera pallida ATCC 43644 10157888 YP_004180835.1 CDS Isop_3730 NC_014962.1 5470801 5471199 R KEGG: sth:STH205 putative superoxide dismutase; SPTR: Putative uncharacterized protein P0501E09.33; hypothetical protein complement(5470801..5471199) Isosphaera pallida ATCC 43644 10157889 YP_004180836.1 CDS Isop_3731 NC_014962.1 5471278 5472786 R COGs: COG0469 Pyruvate kinase; InterPro IPR018209: IPR015793: IPR015794: IPR001697; KEGG: plm:Plim_3274 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; PRIAM: Pyruvate kinase; SPTR: Pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase; pyruvate kinase complement(5471278..5472786) Isosphaera pallida ATCC 43644 10157890 Isop_R0001 tRNA Isop_R0001 NC_014962.1 163208 163280 R tRNA-Trp complement(163208..163280) Isosphaera pallida ATCC 43644 10154211 Isop_R0002 tRNA Isop_R0002 NC_014962.1 165590 165662 R tRNA-Thr complement(165590..165662) Isosphaera pallida ATCC 43644 10154214 Isop_R0003 tRNA Isop_R0003 NC_014962.1 165840 165910 R tRNA-Gly complement(165840..165910) Isosphaera pallida ATCC 43644 10154215 Isop_R0004 tRNA Isop_R0004 NC_014962.1 166029 166111 R tRNA-Tyr complement(166029..166111) Isosphaera pallida ATCC 43644 10154216 Isop_R0005 tRNA Isop_R0005 NC_014962.1 166186 166261 R tRNA-Thr complement(166186..166261) Isosphaera pallida ATCC 43644 10154217 Isop_R0006 tRNA Isop_R0006 NC_014962.1 426129 426217 D tRNA-Leu 426129..426217 Isosphaera pallida ATCC 43644 10154402 Isop_R0007 tRNA Isop_R0007 NC_014962.1 439812 439896 D tRNA-Leu 439812..439896 Isosphaera pallida ATCC 43644 10154414 Isop_R0008 tRNA Isop_R0008 NC_014962.1 727807 727893 R tRNA-Ser complement(727807..727893) Isosphaera pallida ATCC 43644 10154620 Isop_R0009 tRNA Isop_R0009 NC_014962.1 1136891 1136964 R tRNA-Ile complement(1136891..1136964) Isosphaera pallida ATCC 43644 10154918 Isop_R0010 tRNA Isop_R0010 NC_014962.1 1138898 1138984 D tRNA-Ser 1138898..1138984 Isosphaera pallida ATCC 43644 10154921 Isop_R0011 tRNA Isop_R0011 NC_014962.1 1475547 1475630 D tRNA-Leu 1475547..1475630 Isosphaera pallida ATCC 43644 10155140 Isop_R0012 tRNA Isop_R0012 NC_014962.1 1477394 1477464 D tRNA-Gln 1477394..1477464 Isosphaera pallida ATCC 43644 10155142 Isop_R0013 tRNA Isop_R0013 NC_014962.1 1515737 1515810 D tRNA-Asp 1515737..1515810 Isosphaera pallida ATCC 43644 10155166 Isop_R0014 tRNA Isop_R0014 NC_014962.1 1572641 1572726 D tRNA-Leu 1572641..1572726 Isosphaera pallida ATCC 43644 10155207 Isop_R0015 tRNA Isop_R0015 NC_014962.1 1923381 1923455 R tRNA-Pro complement(1923381..1923455) Isosphaera pallida ATCC 43644 10155450 Isop_R0016 tRNA Isop_R0016 NC_014962.1 2032391 2032465 D tRNA-Glu 2032391..2032465 Isosphaera pallida ATCC 43644 10155526 Isop_R0017 tRNA Isop_R0017 NC_014962.1 2062524 2062595 D tRNA-Val 2062524..2062595 Isosphaera pallida ATCC 43644 10155542 Isop_R0018 tRNA Isop_R0018 NC_014962.1 2130786 2130858 D tRNA-Phe 2130786..2130858 Isosphaera pallida ATCC 43644 10155590 Isop_R0019 tRNA Isop_R0019 NC_014962.1 2262448 2262521 R tRNA-Arg complement(2262448..2262521) Isosphaera pallida ATCC 43644 10155675 Isop_R0020 tRNA Isop_R0020 NC_014962.1 2263472 2263548 R tRNA-Met complement(2263472..2263548) Isosphaera pallida ATCC 43644 10155677 Isop_R0021 tRNA Isop_R0021 NC_014962.1 2315348 2315421 D tRNA-Val 2315348..2315421 Isosphaera pallida ATCC 43644 10155717 Isop_R0022 tRNA Isop_R0022 NC_014962.1 2317725 2317796 R tRNA-Cys complement(2317725..2317796) Isosphaera pallida ATCC 43644 10155720 Isop_R0023 tRNA Isop_R0023 NC_014962.1 2385375 2385447 R tRNA-Ala complement(2385375..2385447) Isosphaera pallida ATCC 43644 10155763 Isop_R0024 tRNA Isop_R0024 NC_014962.1 2475504 2475576 D tRNA-His 2475504..2475576 Isosphaera pallida ATCC 43644 10155819 Isop_R0026 tRNA Isop_R0026 NC_014962.1 2495297 2495371 R tRNA-Pro complement(2495297..2495371) Isosphaera pallida ATCC 43644 10155832 Isop_R0027 tRNA Isop_R0027 NC_014962.1 2516872 2516944 R tRNA-Ala complement(2516872..2516944) Isosphaera pallida ATCC 43644 10155854 Isop_R0028 tRNA Isop_R0028 NC_014962.1 2599000 2599070 D tRNA-Cys 2599000..2599070 Isosphaera pallida ATCC 43644 10155914 Isop_R0029 tRNA Isop_R0029 NC_014962.1 2599128 2599200 D tRNA-OTHER 2599128..2599200 Isosphaera pallida ATCC 43644 10155915 Isop_R0030 tRNA Isop_R0030 NC_014962.1 2599258 2599333 D tRNA-Leu 2599258..2599333 Isosphaera pallida ATCC 43644 10155916 Isop_R0031 tRNA Isop_R0031 NC_014962.1 2632808 2632879 D tRNA-Gly 2632808..2632879 Isosphaera pallida ATCC 43644 10155935 Isop_R0032 tRNA Isop_R0032 NC_014962.1 2762916 2763004 D tRNA-Ser 2762916..2763004 Isosphaera pallida ATCC 43644 10156030 Isop_R0033 tRNA Isop_R0033 NC_014962.1 2880678 2880763 R tRNA-Leu complement(2880678..2880763) Isosphaera pallida ATCC 43644 10156105 Isop_R0035 tRNA Isop_R0035 NC_014962.1 3073155 3073225 R tRNA-Gln complement(3073155..3073225) Isosphaera pallida ATCC 43644 10156264 Isop_R0036 tRNA Isop_R0036 NC_014962.1 3078107 3078200 R tRNA-Sec complement(3078107..3078200) Isosphaera pallida ATCC 43644 10156268 Isop_R0037 tRNA Isop_R0037 NC_014962.1 3174752 3174825 D tRNA-Val 3174752..3174825 Isosphaera pallida ATCC 43644 10156316 Isop_R0038 tRNA Isop_R0038 NC_014962.1 3561813 3561885 R tRNA-Asn complement(3561813..3561885) Isosphaera pallida ATCC 43644 10156594 Isop_R0039 tRNA Isop_R0039 NC_014962.1 3711247 3711318 R tRNA-Thr complement(3711247..3711318) Isosphaera pallida ATCC 43644 10156694 Isop_R0043 tRNA Isop_R0043 NC_014962.1 4094075 4094147 D tRNA-Lys 4094075..4094147 Isosphaera pallida ATCC 43644 10156953 Isop_R0045 tRNA Isop_R0045 NC_014962.1 4213189 4213262 D tRNA-Arg 4213189..4213262 Isosphaera pallida ATCC 43644 10157029 Isop_R0047 tRNA Isop_R0047 NC_014962.1 4373443 4373515 R tRNA-Met complement(4373443..4373515) Isosphaera pallida ATCC 43644 10157145 Isop_R0048 tRNA Isop_R0048 NC_014962.1 4398283 4398354 R tRNA-Gly complement(4398283..4398354) Isosphaera pallida ATCC 43644 10157165 Isop_R0049 tRNA Isop_R0049 NC_014962.1 4415802 4415875 R tRNA-Arg complement(4415802..4415875) Isosphaera pallida ATCC 43644 10157171 Isop_R0050 tRNA Isop_R0050 NC_014962.1 4416535 4416607 R tRNA-Ala complement(4416535..4416607) Isosphaera pallida ATCC 43644 10157173 Isop_R0054 tRNA Isop_R0054 NC_014962.1 4813040 4813112 D tRNA-Glu 4813040..4813112 Isosphaera pallida ATCC 43644 10157442 Isop_R0055 tRNA Isop_R0055 NC_014962.1 4924488 4924561 D tRNA-Arg 4924488..4924561 Isosphaera pallida ATCC 43644 10157513 Isop_R0056 tRNA Isop_R0056 NC_014962.1 4924670 4924743 D tRNA-Arg 4924670..4924743 Isosphaera pallida ATCC 43644 10157514 Isop_R0057 tRNA Isop_R0057 NC_014962.1 5274226 5274300 R tRNA-Pro complement(5274226..5274300) Isosphaera pallida ATCC 43644 10157752 Isop_R0058 tRNA Isop_R0058 NC_014962.1 5296943 5297030 D tRNA-Ser 5296943..5297030 Isosphaera pallida ATCC 43644 10157769 Isop_R0040 rRNA Isop_R0040 NC_014962.1 4041635 4043146 D 16S ribosomal RNA 4041635..4043146 Isosphaera pallida ATCC 43644 10156920 Isop_R0041 rRNA Isop_R0041 NC_014962.1 4043908 4046684 D 23S ribosomal RNA 4043908..4046684 Isosphaera pallida ATCC 43644 10156921 Isop_R0042 rRNA Isop_R0042 NC_014962.1 4046992 4047099 D 5S ribosomal RNA 4046992..4047099 Isosphaera pallida ATCC 43644 10156922 Isop_R0051 rRNA Isop_R0051 NC_014962.1 4713337 4714847 D 16S ribosomal RNA 4713337..4714847 Isosphaera pallida ATCC 43644 10157384 Isop_R0052 rRNA Isop_R0052 NC_014962.1 4715614 4718390 D 23S ribosomal RNA 4715614..4718390 Isosphaera pallida ATCC 43644 10157385 Isop_R0053 rRNA Isop_R0053 NC_014962.1 4718698 4718805 D 5S ribosomal RNA 4718698..4718805 Isosphaera pallida ATCC 43644 10157387 Isop_R0059 rRNA Isop_R0059 NC_014962.1 5373387 5373494 R 5S ribosomal RNA complement(5373387..5373494) Isosphaera pallida ATCC 43644 10157823 Isop_R0060 rRNA Isop_R0060 NC_014962.1 5373892 5376668 R 23S ribosomal RNA complement(5373892..5376668) Isosphaera pallida ATCC 43644 10157824 Isop_R0061 rRNA Isop_R0061 NC_014962.1 5377430 5378940 R 16S ribosomal RNA complement(5377430..5378940) Isosphaera pallida ATCC 43644 10157825