-- dump date 20140619_110923 -- class Genbank::CDS -- table cds_note -- id note YP_007314132.1 PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA YP_007314133.1 PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit YP_007314134.1 PFAM: S4 domain YP_007314135.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein YP_007314136.1 PFAM: Protein of unknown function (DUF721) YP_007314138.1 PFAM: Toprim domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit YP_007314139.1 PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit YP_007314140.1 PFAM: family YP_007314141.1 PFAM: Bacillus/Clostridium GerA spore germination protein YP_007314142.1 PFAM: Spore germination protein; TIGRFAM: spore germination protein (amino acid permease) YP_007314143.1 PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family YP_007314145.1 PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type YP_007314146.1 PFAM: Aminotransferase class-V YP_007314147.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; ACT domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; TIGRFAM: D-3-phosphoglycerate dehydrogenase YP_007314148.1 PFAM: tRNA synthetase class II core domain (G, H, P, S and T); Seryl-tRNA synthetase N-terminal domain; TIGRFAM: seryl-tRNA synthetase YP_007314149.1 PFAM: Glycosyl hydrolase family 1 YP_007314150.1 PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit YP_007314151.1 PFAM: Iron only hydrogenase large subunit, C-terminal domain; 4Fe-4S binding domain; PAS fold YP_007314152.1 PFAM: Stage II sporulation protein E (SpoIIE) YP_007314153.1 PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit YP_007314154.1 PFAM: Iron only hydrogenase large subunit, C-terminal domain; 4Fe-4S binding domain; TIGRFAM: [FeFe] hydrogenase, group B1/B3 YP_007314155.1 PFAM: CoA binding domain; Putative DNA-binding protein N-terminus YP_007314156.1 PFAM: Aldehyde dehydrogenase family; Iron-containing alcohol dehydrogenase YP_007314158.1 PFAM: StbA protein; TIGRFAM: PRTRC system protein D YP_007314159.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region YP_007314160.1 PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III, delta' subunit; DNA polymerase III, subunit gamma and tau YP_007314161.1 PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: DNA-binding protein, YbaB/EbfC family YP_007314162.1 PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR YP_007314163.1 PFAM: Domain of unknown function; domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric YP_007314164.1 PFAM: Protein of unknown function (DUF2508) YP_007314165.1 PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family YP_007314166.1 PFAM: 4Fe-4S binding domain; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, delta subunit, pyruvate/2-ketoisovalerate family YP_007314167.1 PFAM: domain; Transketolase, C-terminal domain YP_007314168.1 PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YP_007314169.1 PFAM: Group II intron, maturase-specific domain; Reverse transcriptase (RNA-dependent DNA polymerase); manually curated; non-canonical start codon YP_007314170.1 PFAM: YibE/F-like protein YP_007314171.1 PFAM: Alkaline phosphatase YP_007314172.1 PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase YP_007314173.1 PFAM: Thymidylate kinase YP_007314174.1 PFAM: Protein of unknown function (DUF327) YP_007314175.1 TIGRFAM: DNA polymerase III, delta' subunit; DNA polymerase III, subunit gamma and tau YP_007314176.1 PFAM: PSP1 C-terminal conserved region YP_007314177.1 PFAM: Protein of unknown function (DUF972) YP_007314178.1 PFAM: Methyltransferase small domain YP_007314179.1 PFAM: GIY-YIG catalytic domain YP_007314180.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family YP_007314181.1 PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family YP_007314182.1 PFAM: NurA domain YP_007314183.1 PFAM: HNH endonuclease YP_007314184.1 PFAM: Domain of unknown function DUF87 YP_007314185.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_007314186.1 PFAM: Anticodon-binding domain; tRNA synthetases class I (M); Putative tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; methionyl-tRNA synthetase YP_007314187.1 PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family YP_007314188.1 PFAM: Radical SAM superfamily; TIGRFAM: radical SAM protein, TatD family-associated YP_007314189.1 PFAM: Bacterial extracellular solute-binding protein YP_007314190.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007314191.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007314192.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_007314193.1 PFAM: Toprim domain; TIGRFAM: ribonuclease M5 YP_007314194.1 PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase YP_007314195.1 PFAM: Protein of unknown function (DUF1021) YP_007314196.1 PFAM: Group II intron, maturase-specific domain; Reverse transcriptase (RNA-dependent DNA polymerase) YP_007314197.1 PFAM: Group II intron, maturase-specific domain; Reverse transcriptase (RNA-dependent DNA polymerase); manually curated; non-canonical start codon YP_007314199.1 PFAM: Cysteine-rich secretory protein family; TIGRFAM: uncharacterized protein, YkwD family YP_007314201.1 PFAM: LysM domain YP_007314202.1 PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; TIGRFAM: conserved hypothetical protein YP_007314203.1 PFAM: Peptidase family S51; TIGRFAM: cyanophycinase YP_007314204.1 PFAM: RimK-like ATP-grasp domain; Protein of unknown function (DUF1611); Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: cyanophycin synthetase YP_007314205.1 PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase YP_007314207.1 PFAM: Phosphoribosyl transferase domain; Bacterial purine repressor, N-terminal; TIGRFAM: pur operon repressor, Bacillus subtilis type; xanthine phosphoribosyltransferase YP_007314208.1 PFAM: MerR family regulatory protein YP_007314209.1 PFAM: D-aminoacylase, C-terminal region; Amidohydrolase family YP_007314211.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase YP_007314212.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase YP_007314213.1 PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form YP_007314214.1 PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase YP_007314215.1 PFAM: Protein of unknown function (DUF2757) YP_007314216.1 PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd) YP_007314217.1 PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family; stage V sporulation protein T YP_007314218.1 PFAM: Polysaccharide biosynthesis protein; TIGRFAM: stage V sporulation protein B YP_007314219.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein YP_007314220.1 PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain YP_007314221.1 PFAM: CrcB-like protein; TIGRFAM: protein CrcB YP_007314222.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I YP_007314223.1 PFAM: Bacterial extracellular solute-binding protein YP_007314224.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007314225.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007314226.1 PFAM: Alpha amylase, catalytic domain YP_007314227.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_007314228.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_007314229.1 PFAM: AP endonuclease family 2 C terminus; Xylose isomerase-like TIM barrel YP_007314230.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_007314231.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_007314232.1 PFAM: ABC transporter; TOBE domain YP_007314233.1 PFAM: YabP family; TIGRFAM: sporulation protein YabP YP_007314234.1 PFAM: Spore cortex protein YabQ (Spore_YabQ); TIGRFAM: spore cortex biosynthesis protein YabQ YP_007314235.1 PFAM: Septum formation initiator YP_007314236.1 PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain YP_007314237.1 PFAM: S1 RNA binding domain YP_007314238.1 PFAM: Protein of unknown function (DUF501) YP_007314239.1 PFAM: Ppx/GppA phosphatase family YP_007314240.1 PFAM: Stage II sporulation protein E (SpoIIE); TIGRFAM: stage II sporulation protein E YP_007314241.1 PFAM: TilS substrate C-terminal domain; PP-loop family; TilS substrate binding domain; TIGRFAM: tRNA(Ile)-lysidine synthetase, C-terminal domain; tRNA(Ile)-lysidine synthetase, N-terminal domain YP_007314242.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase YP_007314243.1 PFAM: FtsH Extracellular; Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH YP_007314244.1 PFAM: Formate--tetrahydrofolate ligase YP_007314245.1 PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_007314246.1 PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase; cytidyltransferase-related domain YP_007314247.1 PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase YP_007314249.1 PFAM: HTH domain; Biotin protein ligase C terminal domain; Biotin/lipoate A/B protein ligase family; TIGRFAM: BirA biotin operon repressor domain; birA, biotin-[acetyl-CoA-carboxylase] ligase region YP_007314250.1 PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III YP_007314251.1 PFAM: Dihydrouridine synthase (Dus); TIGRFAM: putative TIM-barrel protein, nifR3 family YP_007314253.1 PFAM: Shikimate / quinate 5-dehydrogenase YP_007314254.1 PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA YP_007314255.1 PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial YP_007314257.1 PFAM: Methyltransferase domain YP_007314258.1 PFAM: Firmicute transcriptional repressor of class III stress genes (CtsR) YP_007314259.1 PFAM: UvrB/uvrC motif YP_007314260.1 PFAM: ATP:guanido phosphotransferase, C-terminal catalytic domain YP_007314261.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); UvrB/uvrC motif YP_007314262.1 PFAM: KaiC; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: DNA repair protein RadA YP_007314263.1 PFAM: DisA bacterial checkpoint controller nucleotide-binding; DisA bacterial checkpoint controller linker region YP_007314264.1 PFAM: CarD-like/TRCF domain YP_007314265.1 PFAM: TRAM domain; PIN domain YP_007314266.1 PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_007314267.1 PFAM: YgbB family; TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_007314268.1 PFAM: HutP; CBS domain YP_007314269.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family YP_007314270.1 PFAM: Serine acetyltransferase, N-terminal; Bacterial transferase hexapeptide (three repeats); TIGRFAM: serine O-acetyltransferase YP_007314271.1 PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase YP_007314272.1 PFAM: RNase3 domain YP_007314273.1 PFAM: Thymidylate synthase complementing protein YP_007314274.1 PFAM: Reverse transcriptase (RNA-dependent DNA polymerase) YP_007314275.1 PFAM: Thymidylate synthase complementing protein YP_007314276.1 PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3 YP_007314277.1 PFAM: VanW like protein; G5 domain YP_007314278.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-H factor YP_007314279.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU YP_007314280.1 PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type YP_007314281.1 PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial YP_007314282.1 PFAM: Transcription termination factor nusG; TIGRFAM: transcription termination/antitermination factor NusG YP_007314283.1 PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11 YP_007314284.1 PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast YP_007314285.1 PFAM: Ribosomal protein L10 YP_007314286.1 PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12 YP_007314287.1 PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit YP_007314288.1 PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 5; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form YP_007314289.1 PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle YP_007314290.1 PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle YP_007314291.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain YP_007314292.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU YP_007314293.1 PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle YP_007314294.1 PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial YP_007314295.1 PFAM: Ribosomal protein L4/L1 family; TIGRFAM: 50S ribosomal protein L4, bacterial/organelle YP_007314296.1 PFAM: Ribosomal protein L23 YP_007314297.1 PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar YP_007314298.1 PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle YP_007314299.1 PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type YP_007314300.1 PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type YP_007314301.1 PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle YP_007314302.1 PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29 YP_007314303.1 PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17 YP_007314304.1 PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle YP_007314305.1 PFAM: KOW motif; TIGRFAM: ribosomal protein L24, bacterial/organelle YP_007314306.1 PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5 YP_007314307.1 PFAM: Ribosomal protein S14p/S29e YP_007314308.1 PFAM: Ribosomal protein S8 YP_007314309.1 PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type YP_007314310.1 PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type YP_007314311.1 PFAM: Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type YP_007314312.1 PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle YP_007314313.1 PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit YP_007314314.1 PFAM: Adenylate kinase, active site lid; Adenylate kinase; TIGRFAM: adenylate kinases YP_007314315.1 PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I YP_007314316.1 PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1 YP_007314317.1 PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type YP_007314318.1 PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13 YP_007314319.1 PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11 YP_007314320.1 PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type YP_007314321.1 PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type YP_007314322.1 PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17 YP_007314323.1 PFAM: ABC transporter; Cobalt ATP-binding cassette C terminal; TIGRFAM: cobalt transport protein ATP-binding subunit YP_007314324.1 PFAM: ABC transporter; Cobalt ATP-binding cassette C terminal; TIGRFAM: cobalt transport protein ATP-binding subunit YP_007314325.1 PFAM: Cobalt transport protein YP_007314326.1 PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I YP_007314327.1 PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type YP_007314328.1 PFAM: Ribosomal protein S9/S16 YP_007314329.1 PFAM: Alanine racemase, N-terminal domain YP_007314330.1 PFAM: Arginase family; TIGRFAM: arginase YP_007314331.1 PFAM: AMMECR1; Catalytic LigB subunit of aromatic ring-opening dioxygenase; TIGRFAM: uncharacterized protein, PH0010 family YP_007314332.1 PFAM: CAAX amino terminal protease family YP_007314333.1 PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase YP_007314334.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_007314335.1 PFAM: Bacterial extracellular solute-binding protein YP_007314336.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007314337.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007314339.1 PFAM: Beta-galactosidase trimerisation domain; Glycosyl hydrolases family 35 YP_007314340.1 PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain YP_007314341.1 PFAM: Glycosyltransferase family 36; Putative carbohydrate binding domain; Glycosyltransferase 36 associated family YP_007314342.1 PFAM: Putative rRNA methylase YP_007314343.1 PFAM: Radical SAM superfamily; TIGRFAM: radical SAM protein, TIGR01212 family YP_007314344.1 PFAM: AMP-binding enzyme YP_007314345.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases YP_007314346.1 PFAM: BioY family YP_007314348.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type YP_007314349.1 PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit YP_007314350.1 PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase YP_007314351.1 PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase, bacterial type YP_007314352.1 PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit; homoaconitate hydratase family protein YP_007314353.1 PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit YP_007314354.1 PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase YP_007314355.1 PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein YP_007314356.1 PFAM: Bacterial regulatory proteins, gntR family; UTRA domain YP_007314357.1 PFAM: PTS system, Lactose/Cellobiose specific IIB subunit; TIGRFAM: PTS system, lactose/cellobiose family IIB component YP_007314358.1 PFAM: Phosphotransferase system, EIIC; TIGRFAM: PTS system, lactose/cellobiose family IIC component YP_007314359.1 PFAM: Bacterial extracellular solute-binding protein YP_007314360.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007314361.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007314362.1 PFAM: Glycosyl hydrolase family 1; TIGRFAM: beta-galactosidase YP_007314363.1 PFAM: Glycosyltransferase family 36 YP_007314364.1 PFAM: Aldo/keto reductase family YP_007314365.1 PFAM: WxcM-like, C-terminal YP_007314369.1 PFAM: Glycosyl hydrolases family 16 YP_007314370.1 PFAM: O-Glycosyl hydrolase family 30 YP_007314371.1 PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain; Carbohydrate binding domain YP_007314372.1 PFAM: Glycosyl hydrolases family 16; Carbohydrate binding domain YP_007314373.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_007314374.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_007314375.1 PFAM: Cellulase (glycosyl hydrolase family 5) YP_007314376.1 PFAM: Aldo/keto reductase family YP_007314377.1 PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN) YP_007314378.1 PFAM: Domain of unknown function (DUF2437); Fumarylacetoacetate (FAA) hydrolase family YP_007314379.1 PFAM: DisA bacterial checkpoint controller nucleotide-binding; TIGRFAM: TIGR00159 family protein YP_007314381.1 PFAM: Phosphotransferase system, EIIC; PTS system, Lactose/Cellobiose specific IIB subunit; TIGRFAM: PTS system, mannitol-specific IIC component YP_007314382.1 PFAM: HTH domain; PTS system, Lactose/Cellobiose specific IIB subunit; PRD domain; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YP_007314383.1 PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YP_007314384.1 PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain YP_007314385.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase YP_007314386.1 PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing) YP_007314387.1 PFAM: Uncharacterised protein family (UPF0236) YP_007314388.1 PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family YP_007314389.1 PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantetheine--protein transferase domain; holo-[acyl-carrier-protein] synthase YP_007314390.1 PFAM: Carbohydrate kinase; YjeF-related protein N-terminus; TIGRFAM: yjeF N-terminal region; yjeF C-terminal region, hydroxyethylthiazole kinase-related YP_007314391.1 PFAM: CBS domain YP_007314392.1 PFAM: DbpA RNA binding domain; TIGRFAM: DNA helicase, putative YP_007314395.1 PFAM: PemK-like protein YP_007314396.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase YP_007314398.1 PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family YP_007314399.1 PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ YP_007314400.1 PFAM: Acetyltransferase (GNAT) family; TIGRFAM: ribosomal-protein-alanine acetyltransferase YP_007314401.1 PFAM: Glycoprotease family; TIGRFAM: putative glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family YP_007314402.1 PFAM: Sodium:neurotransmitter symporter family YP_007314403.1 PFAM: Radical SAM superfamily; Protein of unknown function (DUF512) YP_007314404.1 PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: L-lactate dehydrogenase YP_007314405.1 PFAM: Uncharacterized ACR (DUF711) YP_007314406.1 PFAM: ACT domain YP_007314407.1 PFAM: Chaperonin 10 Kd subunit YP_007314408.1 PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL YP_007314409.1 PFAM: Ribbon-helix-helix protein, copG family; NikR C terminal nickel binding domain; TIGRFAM: nickel-responsive transcriptional regulator NikR YP_007314410.1 PFAM: Asparagine synthase; TIGRFAM: TIGR00268 family protein YP_007314411.1 PFAM: AIR carboxylase YP_007314412.1 PFAM: Glutamine amidotransferase class-I; GMP synthase C terminal domain; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit YP_007314413.1 PFAM: Permease family YP_007314414.1 PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain YP_007314416.1 PFAM: CheW-like domain YP_007314417.1 PFAM: Aconitate B N-terminal domain; Aconitase family (aconitate hydratase); Aconitate hydratase 2 N-terminus; TIGRFAM: aconitate hydratase 2 YP_007314419.1 PFAM: Membrane transport protein YP_007314420.1 PFAM: EamA-like transporter family; TIGRFAM: rarD protein YP_007314421.1 PFAM: Major Facilitator Superfamily YP_007314422.1 PFAM: CBS domain YP_007314423.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_007314424.1 PFAM: Major Facilitator Superfamily YP_007314425.1 PFAM: Aminotransferase class-V YP_007314426.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase YP_007314427.1 PFAM: Protein of unknown function (DUF1271) YP_007314428.1 PFAM: SEC-C motif YP_007314429.1 PFAM: PBS lyase HEAT-like repeat; Domain of unknown function (DUF1730); TIGRFAM: iron-sulfur cluster binding protein, putative YP_007314430.1 PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthase YP_007314431.1 PFAM: Nitroreductase family YP_007314432.1 PFAM: Tautomerase enzyme; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme YP_007314433.1 PFAM: 4Fe-4S binding domain; Domain of unknown function (DUF362) YP_007314434.1 PFAM: Flavin reductase like domain YP_007314435.1 PFAM: MarR family YP_007314436.1 TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies) YP_007314445.1 TIGRFAM: RHS repeat-associated core domain YP_007314447.1 PFAM: HNH endonuclease; Group II intron, maturase-specific domain; Reverse transcriptase (RNA-dependent DNA polymerase) YP_007314448.1 PFAM: Uncharacterised protein family (UPF0236) YP_007314449.1 PFAM: Peptidase C26 YP_007314450.1 PFAM: Na+/H+ antiporter family YP_007314451.1 PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative YP_007314452.1 PFAM: Copper/zinc superoxide dismutase (SODC) YP_007314453.1 PFAM: Domain of unknown function (DUF362) YP_007314455.1 PFAM: Protein of unknown function (DUF523) YP_007314456.1 PFAM: SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, putative, group 2 YP_007314457.1 PFAM: Aminotransferase class IV; TIGRFAM: D-amino acid aminotransferase YP_007314458.1 PFAM: Thioredoxin YP_007314459.1 PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: L-lactate dehydrogenase YP_007314460.1 PFAM: Transposase DDE domain YP_007314461.1 PFAM: Ferric uptake regulator family YP_007314462.1 PFAM: UV-endonuclease UvdE; TIGRFAM: UV damage endonuclease UvdE YP_007314463.1 PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit YP_007314464.1 PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain YP_007314465.1 PFAM: Iron only hydrogenase large subunit, C-terminal domain; 2Fe-2S iron-sulfur cluster binding domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Iron hydrogenase small subunit; TIGRFAM: [FeFe] hydrogenase, group A YP_007314466.1 PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme YP_007314467.1 PFAM: PHP domain; TIGRFAM: histidinol phosphate phosphatase, HisJ family YP_007314468.1 PFAM: MgtE intracellular N domain; Divalent cation transporter; CBS domain; TIGRFAM: Mg2+ transporter (mgtE) YP_007314469.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain YP_007314470.1 PFAM: Aminotransferase class I and II YP_007314473.1 PFAM: Bacterial DNA polymerase III alpha subunit; PHP domain; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc) YP_007314474.1 PFAM: Phosphatidylglycerophosphatase A YP_007314475.1 PFAM: Domain of unknown function (DUF368) YP_007314476.1 PFAM: Tryptophan RNA-binding attenuator protein YP_007314477.1 PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; TIGRFAM: anthranilate synthase component I, non-proteobacterial lineages; anthranilate synthase component I, archaeal clade YP_007314478.1 PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase YP_007314479.1 PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase YP_007314480.1 PFAM: Indole-3-glycerol phosphate synthase YP_007314481.1 PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase YP_007314482.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit YP_007314483.1 PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit YP_007314484.1 PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit YP_007314485.1 PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit YP_007314486.1 PFAM: Phosphofructokinase; TIGRFAM: 6-phosphofructokinase YP_007314487.1 PFAM: Pyruvate kinase, barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase YP_007314488.1 PFAM: FxsA cytoplasmic membrane protein YP_007314489.1 PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain; manually curated; non-canonical start codon YP_007314491.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_007314492.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007314493.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase YP_007314494.1 PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain YP_007314495.1 PFAM: ZIP Zinc transporter YP_007314497.1 PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain; manually curated; non-canonical start codon YP_007314499.1 PFAM: Prismane/CO dehydrogenase family; TIGRFAM: hydroxylamine reductase YP_007314500.1 PFAM: Isochorismatase family YP_007314501.1 PFAM: Flavodoxin; Metallo-beta-lactamase superfamily YP_007314502.1 PFAM: Hemerythrin HHE cation binding domain; Domain of Unknown function (DUF542); TIGRFAM: iron-sulfur cluster repair di-iron protein YP_007314503.1 PFAM: Transposase DDE domain YP_007314504.1 PFAM: Phage integrase family YP_007314507.1 PFAM: Bacteriophage Mu Gam like protein YP_007314508.1 PFAM: Bacterial flagellin N-terminal helical region YP_007314509.1 PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region YP_007314511.1 PFAM: CryBP1 protein YP_007314512.1 PFAM: S-layer homology domain YP_007314513.1 PFAM: 5'-3' exonuclease, C-terminal SAM fold; 5'-3' exonuclease, N-terminal resolvase-like domain; DNA polymerase family A; TIGRFAM: DNA polymerase I YP_007314514.1 PFAM: Putative modulator of DNA gyrase YP_007314515.1 PFAM: Putative modulator of DNA gyrase YP_007314517.1 PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; Zinc finger found in FPG and IleRS; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg) YP_007314518.1 PFAM: ABC transporter YP_007314519.1 PFAM: Domain of unknown function DUF; TIGRFAM: putative sporulation protein YtaF YP_007314520.1 PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase YP_007314521.1 PFAM: Transglycosylase SLT domain YP_007314522.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007314523.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007314524.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_007314525.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_007314527.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_007314529.1 PFAM: UbiA prenyltransferase family YP_007314531.1 PFAM: Sulfite exporter TauE/SafE YP_007314533.1 PFAM: Cell Wall Hydrolase YP_007314534.1 TIGRFAM: germination protein YpeB YP_007314535.1 PFAM: Transposase DDE domain YP_007314537.1 PFAM: IstB-like ATP binding protein YP_007314538.1 PFAM: Transposase YP_007314539.1 PFAM: CGGC domain YP_007314540.1 PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS YP_007314541.1 PFAM: 4Fe-4S binding domain YP_007314542.1 PFAM: Bacterial regulatory proteins, tetR family YP_007314543.1 PFAM: Bacterial Ig-like domain (group 2); Alpha amylase, catalytic domain; Domain of unknown function (DUF2223) YP_007314544.1 PFAM: Transposase YP_007314545.1 PFAM: Integrase core domain YP_007314546.1 PFAM: Mga helix-turn-helix domain; HTH domain; PRD domain; PTS system, Lactose/Cellobiose specific IIB subunit; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YP_007314547.1 PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; TIGRFAM: PTS system, fructose subfamily, IIA component YP_007314548.1 PFAM: PTS system, Lactose/Cellobiose specific IIB subunit; TIGRFAM: PTS system, fructose-specific, IIB component YP_007314549.1 PFAM: Phosphotransferase system, EIIC; TIGRFAM: PTS system, fructose subfamily, IIC component YP_007314550.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_007314551.1 PFAM: Positive regulator of sigma(E), RseC/MucC YP_007314558.1 PFAM: Phosphoglucose isomerase YP_007314560.1 PFAM: Copper amine oxidase N-terminal domain; N-acetylmuramoyl-L-alanine amidase; Localisation of periplasmic protein complexes YP_007314561.1 PFAM: Copper amine oxidase N-terminal domain; N-acetylmuramoyl-L-alanine amidase; Localisation of periplasmic protein complexes; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD YP_007314562.1 PFAM: Sporulation and spore germination YP_007314563.1 PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase YP_007314564.1 PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I YP_007314565.1 PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase YP_007314566.1 PFAM: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain YP_007314567.1 PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase YP_007314568.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2325) YP_007314569.1 PFAM: Flavodoxin; TIGRFAM: flavodoxin, short chain YP_007314570.1 PFAM: FeoA domain YP_007314571.1 PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain YP_007314572.1 PFAM: Ferric uptake regulator family YP_007314573.1 PFAM: 4Fe-4S binding domain YP_007314574.1 PFAM: FeoA domain YP_007314575.1 PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain YP_007314578.1 PFAM: Nucleoside recognition YP_007314579.1 PFAM: Nucleoside recognition YP_007314580.1 PFAM: EamA-like transporter family YP_007314581.1 PFAM: Beta-eliminating lyase YP_007314582.1 PFAM: Shikimate dehydrogenase substrate binding domain; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase YP_007314584.1 PFAM: Bacterial type II secretion system protein F domain YP_007314585.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_007314586.1 TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; manually curated; non-canonical start codon YP_007314587.1 TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_007314589.1 PFAM: Competence protein A; TIGRFAM: type IV pilus assembly protein PilM YP_007314590.1 PFAM: Fimbrial assembly protein (PilN) YP_007314591.1 PFAM: Pilus assembly protein, PilO YP_007314593.1 PFAM: Chorismate synthase; TIGRFAM: chorismate synthase YP_007314594.1 PFAM: Shikimate kinase YP_007314595.1 PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase YP_007314596.1 PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II YP_007314597.1 PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain YP_007314598.1 PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P YP_007314599.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007314600.1 PFAM: Type II/IV secretion system protein; TIGRFAM: stage III sporulation protein AA YP_007314601.1 PFAM: Stage III sporulation protein AB (spore_III_AB); TIGRFAM: stage III sporulation protein AB YP_007314602.1 PFAM: Stage III sporulation protein AC/AD protein family; TIGRFAM: stage III sporulation protein AC YP_007314603.1 PFAM: Stage III sporulation protein AC/AD protein family; TIGRFAM: stage III sporulation protein AD YP_007314604.1 PFAM: Stage III sporulation protein AE (spore_III_AE); TIGRFAM: stage III sporulation protein AE YP_007314605.1 PFAM: Stage III sporulation protein AF (Spore_III_AF); TIGRFAM: stage III sporulation protein AF YP_007314606.1 TIGRFAM: stage III sporulation protein AG YP_007314608.1 PFAM: HMGL-like; Biotin-requiring enzyme; Conserved carboxylase domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_007314609.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit YP_007314610.1 PFAM: Protein of unknown function (DUF322) YP_007314611.1 PFAM: Protein of unknown function (DUF322) YP_007314612.1 PFAM: Small integral membrane protein (DUF2273) YP_007314613.1 PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB YP_007314614.1 PFAM: Glycoprotease family; TIGRFAM: metallohydrolase, glycoprotease/Kae1 family YP_007314615.1 PFAM: Iron-containing alcohol dehydrogenase YP_007314616.1 PFAM: Oxidoreductase FAD-binding domain; Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain YP_007314617.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthase (NADPH), homotetrameric YP_007314618.1 PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_007314619.1 PFAM: Exonuclease VII, large subunit; OB-fold nucleic acid binding domain; TIGRFAM: exodeoxyribonuclease VII, large subunit YP_007314620.1 TIGRFAM: DNA binding domain, excisionase family YP_007314621.1 PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain YP_007314623.1 PFAM: StbA protein YP_007314627.1 PFAM: Exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit YP_007314628.1 PFAM: Polyprenyl synthetase YP_007314629.1 PFAM: Dehydrogenase E1 component; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase YP_007314630.1 PFAM: S4 domain; FtsJ-like methyltransferase; TIGRFAM: hemolysin TlyA family protein YP_007314631.1 PFAM: ATP-NAD kinase YP_007314632.1 PFAM: Arginine repressor, C-terminal domain; Arginine repressor, DNA binding domain; TIGRFAM: arginine repressor YP_007314633.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN YP_007314634.1 PFAM: SpoIVB peptidase S55; TIGRFAM: stage IV sporulation protein B YP_007314635.1 PFAM: Sporulation initiation factor Spo0A C terminal; Response regulator receiver domain; TIGRFAM: sporulation transcription factor Spo0A YP_007314636.1 PFAM: Thiamine pyrophosphokinase C terminal; Thiamin pyrophosphokinase, catalytic domain YP_007314637.1 PFAM: Protein of unknown function (DUF3186) YP_007314638.1 PFAM: Glycosyl transferase family 2 YP_007314639.1 PFAM: Glycosyl transferase family 4 YP_007314640.1 PFAM: Sodium:neurotransmitter symporter family YP_007314642.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: peptidase T-like protein YP_007314643.1 PFAM: Spo0E like sporulation regulatory protein YP_007314645.1 PFAM: NUDIX domain; TIGRFAM: nudix-type nucleoside diphosphatase, YffH/AdpP family YP_007314647.1 PFAM: Reticulon; Integral membrane protein DUF95; TIGRFAM: stage II sporulation protein M YP_007314648.1 PFAM: Metalloenzyme superfamily; TIGRFAM: phosphopentomutase YP_007314649.1 PFAM: Phosphorylase superfamily; TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine/guanosine/xanthosine phosphorylase family YP_007314651.1 PFAM: CheC-like family YP_007314652.1 PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain YP_007314653.1 PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; anti-sigma F factor antagonist YP_007314654.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; TIGRFAM: anti-sigma F factor YP_007314655.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily YP_007314657.1 PFAM: Stage V sporulation protein AA YP_007314659.1 PFAM: SpoVA protein; TIGRFAM: stage V sporulation protein AC YP_007314660.1 PFAM: Stage V sporulation protein AD (SpoVAD); TIGRFAM: stage V sporulation protein AD YP_007314661.1 PFAM: SpoVA protein; TIGRFAM: stage V sporulation protein AE YP_007314663.1 PFAM: Bacillus/Clostridium GerA spore germination protein YP_007314664.1 PFAM: CoA enzyme activase uncharacterised domain (DUF2229) YP_007314665.1 PFAM: CoA enzyme activase uncharacterised domain (DUF2229) YP_007314666.1 PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative YP_007314667.1 PFAM: MMPL family; TIGRFAM: The (Largely Archaeal Putative) Hydrophobe/Amphiphile Efflux-3 (HAE3) Family YP_007314668.1 PFAM: Protein of unknown function (DUF1329) YP_007314670.1 PFAM: YsiA-like protein, C-terminal region; Bacterial regulatory proteins, tetR family YP_007314671.1 PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase YP_007314672.1 PFAM: DHHA1 domain; DHH family; CBS domain; Poly A polymerase head domain YP_007314673.1 PFAM: Peptidase family M50 YP_007314674.1 PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase YP_007314675.1 PFAM: ScpA/B protein YP_007314676.1 PFAM: Putative transcriptional regulators (Ypuh-like); TIGRFAM: segregation and condensation protein B YP_007314677.1 PFAM: ABC transporter; manually curated; non-canonical start codon YP_007314678.1 PFAM: Periplasmic binding protein YP_007314679.1 PFAM: FecCD transport family YP_007314680.1 PFAM: FecCD transport family YP_007314681.1 PFAM: Protein of unknown function (DUF2953) YP_007314682.1 PFAM: Sporulation protein YtfJ (Spore_YtfJ); TIGRFAM: sporulation protein YtfJ YP_007314683.1 PFAM: D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5, C-terminal domain YP_007314684.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase YP_007314685.1 PFAM: Radical SAM superfamily YP_007314686.1 PFAM: Stage V sporulation protein S (SpoVS) YP_007314687.1 PFAM: RecF/RecN/SMC N terminal domain; SMC proteins Flexible Hinge Domain; TIGRFAM: chromosome segregation protein SMC, primarily archaeal type; chromosome segregation protein SMC, common bacterial type YP_007314689.1 PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY YP_007314690.1 PFAM: Putative helix-turn-helix protein, YlxM / p13 like; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007314691.1 PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle-docking protein FtsY; signal recognition particle protein YP_007314692.1 PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16 YP_007314693.1 PFAM: KH domain YP_007314694.1 PFAM: PRC-barrel domain; RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM YP_007314695.1 PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase YP_007314696.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2168) YP_007314697.1 PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type YP_007314698.1 PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type YP_007314699.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YlqF YP_007314700.1 PFAM: Ribonuclease HII YP_007314703.1 PFAM: Uncharacterised protein family UPF0102; TIGRFAM: TIGR00252 family protein YP_007314704.1 PFAM: Magnesium chelatase, subunit ChlI; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: Mg chelatase-related protein YP_007314707.1 PFAM: Carbohydrate binding domain (family 25) YP_007314708.1 PFAM: Manganese containing catalase YP_007314709.1 PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA YP_007314710.1 PFAM: Protein of unknown function (DUF494) YP_007314711.1 PFAM: Toprim domain; Topoisomerase DNA binding C4 zinc finger; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial YP_007314712.1 PFAM: Proteasome subunit; TIGRFAM: ATP-dependent protease HslVU, peptidase subunit YP_007314713.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent protease HslVU, ATPase subunit YP_007314714.1 PFAM: CodY helix-turn-helix domain; CodY GAF-like domain; TIGRFAM: GTP-sensing transcriptional pleiotropic repressor CodY YP_007314715.1 PFAM: Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgB YP_007314716.1 PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC YP_007314717.1 PFAM: Flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex protein FliE YP_007314718.1 PFAM: Secretory protein of YscJ/FliF family; Flagellar M-ring protein C-terminal; TIGRFAM: flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) YP_007314719.1 PFAM: FliG C-terminal domain; TIGRFAM: flagellar motor switch protein FliG YP_007314720.1 PFAM: Flagellar assembly protein FliH YP_007314721.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family; type III secretion apparatus H+-transporting two-sector ATPase; flagellar protein export ATPase FliI YP_007314722.1 PFAM: Flagellar FliJ protein; TIGRFAM: flagellar export protein FliJ YP_007314724.1 PFAM: Flagellar hook-length control protein FliK YP_007314725.1 PFAM: Flagellar hook capping protein YP_007314726.1 PFAM: Protein of unknown function (DUF3766); TIGRFAM: flagellar operon protein YP_007314727.1 PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); Flagellar basal body protein FlaE; TIGRFAM: flagellar hook protein FlgE, epsilon proteobacterial; flagellar basal-body rod protein FlgF; fagellar hook-basal body proteins YP_007314728.1 PFAM: Flagellar protein (FlbD) YP_007314729.1 PFAM: MotA/TolQ/ExbB proton channel family YP_007314730.1 PFAM: OmpA family YP_007314731.1 PFAM: Flagellar basal body-associated protein FliL YP_007314732.1 PFAM: Surface presentation of antigens (SPOA); Flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM YP_007314733.1 PFAM: Surface presentation of antigens (SPOA); CheC-like family; TIGRFAM: flagellar motor switch protein FliN YP_007314734.1 PFAM: Flagellar biosynthesis protein, FliO YP_007314735.1 PFAM: FliP family; TIGRFAM: flagellar biosynthetic protein FliP YP_007314736.1 PFAM: Bacterial export proteins, family 3; TIGRFAM: flagellar biosynthetic protein FliQ YP_007314737.1 PFAM: Bacterial export proteins, family 1; TIGRFAM: flagellar biosynthetic protein FliR YP_007314738.1 PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: type III secretion protein, YscU/HrpY family; flagellar biosynthetic protein FlhB YP_007314739.1 PFAM: FHIPEP family; TIGRFAM: flagellar biosynthesis protein FlhA; type III secretion protein, HrcV family YP_007314740.1 PFAM: SRP54-type protein, GTPase domain YP_007314741.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain YP_007314742.1 PFAM: PilZ domain YP_007314743.1 PFAM: CheC-like family YP_007314744.1 PFAM: CheD; manually curated YP_007314746.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family YP_007314747.1 PFAM: Protein of unknown function (DUF342) YP_007314750.1 PFAM: YceG-like family YP_007314751.1 PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type YP_007314752.1 PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts YP_007314753.1 PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase YP_007314754.1 PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor YP_007314755.1 PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase YP_007314756.1 PFAM: Cytidylyltransferase family YP_007314757.1 PFAM: Domain of unknown function DUF20; TIGRFAM: sporulation integral membrane protein YtvI YP_007314758.1 PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_007314759.1 PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP YP_007314761.1 PFAM: HD domain; TIGRFAM: VCBS repeat; uncharacterized domain HDIG YP_007314762.1 PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase YP_007314763.1 PFAM: Anticodon binding domain; YbaK / prolyl-tRNA synthetases associated domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family II YP_007314764.1 PFAM: Glycosyl transferase family 2 YP_007314765.1 PFAM: MgtC family; manually curated; non-canonical start codon YP_007314766.1 PFAM: DNA polymerase III polC-type N-terminus; Bacterial DNA polymerase III alpha subunit; PHP domain; Exonuclease; OB-fold nucleic acid binding domain; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; DNA polymerase III, alpha chain, Gram-positive type YP_007314767.1 PFAM: Uncharacterised BCR, YhbC family COG0779 YP_007314768.1 PFAM: NusA N-terminal domain; S1 RNA binding domain; TIGRFAM: transcription termination factor NusA YP_007314769.1 PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2 YP_007314770.1 PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A YP_007314771.1 PFAM: DHH family; DHHA1 domain YP_007314772.1 PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase YP_007314773.1 PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle YP_007314774.1 PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; Polyribonucleotide nucleotidyltransferase, RNA binding domain; TIGRFAM: polyribonucleotide nucleotidyltransferase YP_007314775.1 PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: apurinic endonuclease (APN1) YP_007314776.1 PFAM: LysM domain; Cell Wall Hydrolase YP_007314777.1 PFAM: LysM domain; Cell Wall Hydrolase YP_007314778.1 PFAM: N-acetylmuramoyl-L-alanine amidase; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD YP_007314779.1 PFAM: Polysaccharide deacetylase; TIGRFAM: polysaccharide deacetylase family sporulation protein PdaB YP_007314780.1 PFAM: Polysaccharide deacetylase; TIGRFAM: polysaccharide deacetylase family sporulation protein PdaB; probable sporulation protein, polysaccharide deacetylase family YP_007314781.1 PFAM: VanW like protein YP_007314782.1 PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) YP_007314783.1 PFAM: Cache domain; HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_007314784.1 PFAM: PRC-barrel domain; TIGRFAM: sporulation protein, YlmC/YmxH family YP_007314785.1 PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase YP_007314786.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; TIGRFAM: dipicolinic acid synthetase, A subunit YP_007314787.1 PFAM: Flavoprotein; TIGRFAM: dipicolinic acid synthetase, B subunit YP_007314788.1 PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) YP_007314789.1 PFAM: Amino acid kinase family; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase; manually curated; non-canonical start codon YP_007314790.1 PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase YP_007314791.1 PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; TIGRFAM: conserved hypothetical protein YP_007314792.1 PFAM: Tetratricopeptide repeat YP_007314795.1 PFAM: QueT transporter YP_007314796.1 PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; haloacid dehalogenase-like hydrolase; Cation transporter/ATPase, N-terminus; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; potassium and/or sodium efflux P-type ATPase, fungal-type YP_007314797.1 PFAM: Clp protease YP_007314799.1 PFAM: Na+/Pi-cotransporter; TIGRFAM: Na/Pi-cotransporter YP_007314800.1 PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP YP_007314801.1 PFAM: Ftsk gamma domain; FtsK/SpoIIIE family YP_007314802.1 PFAM: Bacterial regulatory proteins, gntR family; UTRA domain YP_007314803.1 PFAM: Basic membrane protein YP_007314804.1 PFAM: ABC transporter YP_007314805.1 PFAM: Branched-chain amino acid transport system / permease component YP_007314806.1 PFAM: Branched-chain amino acid transport system / permease component YP_007314808.1 PFAM: Transposase DDE domain YP_007314810.1 PFAM: CAAX amino terminal protease family YP_007314811.1 PFAM: Voltage gated chloride channel YP_007314812.1 PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE YP_007314813.1 TIGRFAM: putative membrane protein, TIGR04086 family YP_007314816.1 PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain YP_007314817.1 PFAM: Na+/H+ antiporter family YP_007314818.1 PFAM: Spo0E like sporulation regulatory protein YP_007314819.1 PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form YP_007314820.1 PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase YP_007314821.1 PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase YP_007314822.1 PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine transaminases YP_007314823.1 PFAM: pfkB family carbohydrate kinase; TIGRFAM: hexose kinase, 1-phosphofructokinase family YP_007314824.1 PFAM: CBS domain YP_007314825.1 PFAM: Sodium/hydrogen exchanger family YP_007314826.1 PFAM: Sodium/hydrogen exchanger family YP_007314829.1 PFAM: Protein of unknown function (DUF1312) YP_007314830.1 PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG YP_007314831.1 PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit YP_007314832.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit YP_007314834.1 PFAM: Protein of unknown function (DUF421) YP_007314835.1 PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; copper ion binding protein; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_007314836.1 PFAM: Uncharacterised BCR, COG1937 YP_007314837.1 PFAM: Heavy-metal-associated domain; TIGRFAM: copper ion binding protein YP_007314838.1 PFAM: Hemerythrin HHE cation binding domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; TIGRFAM: hemerythrin-like metal-binding domain YP_007314839.1 PFAM: Bacterial transcriptional activator domain YP_007314840.1 PFAM: Bacterial transcriptional activator domain YP_007314842.1 PFAM: ZIP Zinc transporter YP_007314843.1 PFAM: Rubredoxin YP_007314844.1 PFAM: Desulfoferrodoxin; Desulfoferrodoxin, N-terminal domain; TIGRFAM: desulfoferrodoxin FeS4 iron-binding domain; desulfoferrodoxin; desulfoferrodoxin ferrous iron-binding domain YP_007314845.1 PFAM: Rubrerythrin YP_007314846.1 PFAM: Flavodoxin; Metallo-beta-lactamase superfamily YP_007314847.1 PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase YP_007314848.1 PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC YP_007314849.1 PFAM: Bacterial regulatory proteins, gntR family; UTRA domain YP_007314850.1 PFAM: Phosphotriesterase family YP_007314851.1 PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YP_007314852.1 PFAM: PTS system, Lactose/Cellobiose specific IIB subunit YP_007314853.1 PFAM: PTS system sugar-specific permease component YP_007314854.1 PFAM: Creatinine amidohydrolase YP_007314855.1 PFAM: SIS domain YP_007314856.1 PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: glucosamine-6-phosphate isomerase YP_007314857.1 PFAM: Amidohydrolase family; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase YP_007314858.1 PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase AhpD family core domain YP_007314859.1 PFAM: Rubrerythrin YP_007314860.1 PFAM: Uncharacterised protein family (UPF0236) YP_007314861.1 PFAM: NAD dependent epimerase/dehydratase family YP_007314862.1 PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein YP_007314863.1 PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase YP_007314864.1 PFAM: Glycosyl transferase family 2 YP_007314868.1 PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase; manually curated; non-canonical start codon YP_007314869.1 PFAM: Bacterial extracellular solute-binding protein YP_007314870.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007314871.1 PFAM: ABC transporter YP_007314872.1 PFAM: Prismane/CO dehydrogenase family; TIGRFAM: hydroxylamine reductase YP_007314874.1 PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing) YP_007314876.1 PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter YP_007314877.1 PFAM: Nitrogen regulatory protein P-II YP_007314880.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase YP_007314881.1 PFAM: Predicted membrane protein (DUF2078) YP_007314882.1 PFAM: Sporulation protein YtfJ (Spore_YtfJ) YP_007314883.1 PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: uncharacterized protein, YfiH family YP_007314884.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB YP_007314885.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; phosphate regulon sensor kinase PhoR YP_007314886.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_007314887.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_007314888.1 PFAM: Xylose isomerase-like TIM barrel YP_007314889.1 PFAM: Transposase YP_007314890.1 PFAM: Cupin domain YP_007314891.1 PFAM: Radical SAM superfamily; TIGRFAM: glycine radical enzyme activase, YjjW family YP_007314892.1 PFAM: Protein of unknown function (DUF3029); TIGRFAM: glycine radical enzyme, YjjI family YP_007314893.1 PFAM: pfkB family carbohydrate kinase YP_007314894.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_007314895.1 PFAM: Phosphotransferase system, EIIC; phosphotransferase system, EIIB; TIGRFAM: PTS system, sucrose-specific IIBC component; PTS system, glucose-like IIB component YP_007314896.1 PFAM: Glycosyl hydrolases family 32 C terminal; Glycosyl hydrolases family 32 N-terminal domain; TIGRFAM: sucrose-6-phosphate hydrolase YP_007314897.1 PFAM: Glycerophosphoryl diester phosphodiesterase family YP_007314898.1 TIGRFAM: phosphate binding protein YP_007314899.1 TIGRFAM: phosphate binding protein YP_007314900.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstC; phosphate ABC transporter, permease protein PstA YP_007314901.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: phosphate ABC transporter, permease protein PstA YP_007314902.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_007314903.1 PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein YP_007314904.1 PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU YP_007314905.1 PFAM: Na+/H+ antiporter family YP_007314906.1 PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU YP_007314907.1 TIGRFAM: putative membrane fusion protein YP_007314908.1 PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family YP_007314909.1 PFAM: Protein of unknown function (DUF552) YP_007314910.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase YP_007314911.1 PFAM: YGGT family YP_007314912.1 PFAM: S4 domain; TIGRFAM: photosystem II S4 domain protein YP_007314913.1 PFAM: DivIVA protein; TIGRFAM: DivIVA domain YP_007314914.1 TIGRFAM: putative iron-only hydrogenase system regulator YP_007314915.1 PFAM: Phosphorylase superfamily; TIGRFAM: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase YP_007314916.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Zinc finger found in FPG and IleRS; TIGRFAM: isoleucyl-tRNA synthetase YP_007314917.1 PFAM: Domain of unknown function (DUF370) YP_007314918.1 PFAM: Guanylate kinase; TIGRFAM: guanylate kinase YP_007314919.1 PFAM: RNA polymerase Rpb6; TIGRFAM: DNA-directed RNA polymerase, omega subunit YP_007314920.1 PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic YP_007314921.1 PFAM: S-Ribosylhomocysteinase (LuxS) YP_007314922.1 PFAM: ABC transporter substrate binding protein YP_007314923.1 PFAM: Branched-chain amino acid transport system / permease component YP_007314924.1 PFAM: ABC transporter YP_007314925.1 PFAM: Uncharacterized conserved protein (DUF2294) YP_007314926.1 PFAM: Major Facilitator Superfamily; Bacterial protein of unknown function (DUF894) YP_007314927.1 PFAM: Polysaccharide deacetylase; LysM domain; TIGRFAM: polysaccharide deacetylase family sporulation protein PdaB YP_007314928.1 PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain; TIGRFAM: S-adenosylmethionine synthetase YP_007314929.1 PFAM: Nitroreductase family YP_007314930.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_007314932.1 PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase YP_007314933.1 PFAM: Iron only hydrogenase large subunit, C-terminal domain; 4Fe-4S binding domain YP_007314934.1 PFAM: Uncharacterized BCR, YitT family COG1284 YP_007314935.1 PFAM: Restriction endonuclease YP_007314936.1 PFAM: EAL domain; HAMP domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_007314937.1 PFAM: Protein of unknown function (DUF1232) YP_007314938.1 PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein YP_007314939.1 PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; TIGRFAM: primosomal protein N' YP_007314940.1 PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase YP_007314941.1 PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase YP_007314942.1 PFAM: Protein of unknown function DUF116 YP_007314943.1 PFAM: Putative neutral zinc metallopeptidase YP_007314944.1 PFAM: NOL1/NOP2/sun family; NusB family; TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB; NOL1/NOP2/sun family putative RNA methylase; transcription antitermination factor NusB YP_007314945.1 PFAM: Radical SAM superfamily; TIGRFAM: 23S rRNA m2A2503 methyltransferase YP_007314946.1 PFAM: FHA domain YP_007314947.1 PFAM: Protein phosphatase 2C YP_007314948.1 PFAM: Protein kinase domain; PASTA domain YP_007314949.1 PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A YP_007314950.1 PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase YP_007314951.1 PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase, archaeal; riboflavin biosynthesis protein RibD YP_007314952.1 PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit YP_007314953.1 PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_007314954.1 PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase YP_007314956.1 PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: endonuclease III YP_007314957.1 PFAM: FlhB HrpN YscU SpaS Family; TIGRFAM: flhB C-terminus-related protein YP_007314958.1 PFAM: Flagellar hook-length control protein FliK YP_007314960.1 PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4 YP_007314961.1 PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: sporulation protein, yteA family YP_007314962.1 PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase YP_007314963.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family YP_007314964.1 PFAM: Phosphoribosyl transferase domain YP_007314965.1 PFAM: Permease family; TIGRFAM: uracil-xanthine permease YP_007314966.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_007314967.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase YP_007314968.1 PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type YP_007314969.1 PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 2 YP_007314970.1 PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit YP_007314971.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit YP_007314972.1 PFAM: Oxidoreductase FAD-binding domain; Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain YP_007314973.1 PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase (subfamily 1) family protein YP_007314974.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase, Thermus family; orotate phosphoribosyltransferase YP_007314975.1 PFAM: HD domain YP_007314976.1 PFAM: Acetyltransferase (GNAT) family YP_007314977.1 PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA) YP_007314978.1 PFAM: Protein of unknown function (DUF1232) YP_007314979.1 PFAM: NUDIX domain YP_007314980.1 PFAM: GGDEF domain; GAF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_007314981.1 TIGRFAM: phosphoesterase, MJ0936 family YP_007314982.1 PFAM: THUMP domain; TIGRFAM: TIGR01213 family protein YP_007314983.1 PFAM: ATPase family associated with various cellular activities (AAA) YP_007314984.1 PFAM: Protein of unknown function DUF58 YP_007314986.1 PFAM: ABC transporter YP_007314987.1 PFAM: Predicted permease YP_007314988.1 PFAM: Predicted permease YP_007314989.1 PFAM: Protein of unknown function (DUF1329) YP_007314991.1 PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase YP_007314993.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_007314994.1 PFAM: Aldo/keto reductase family YP_007314995.1 PFAM: Clp protease; NfeD-like YP_007314996.1 PFAM: SigmaW regulon antibacterial YP_007314998.1 PFAM: Protein of unknown function (DUF421) YP_007314999.1 PFAM: Small, acid-soluble spore proteins, alpha/beta type YP_007315002.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Glutaredoxin; TIGRFAM: thioredoxin-disulfide reductase; Glutaredoxin, GrxC family YP_007315003.1 PFAM: BFD-like [2Fe-2S] binding domain YP_007315005.1 PFAM: CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated endonuclease Cas1 YP_007315006.1 PFAM: CRISPR associated protein Cas2; TIGRFAM: CRISPR-associated endoribonuclease Cas2 YP_007315007.1 PFAM: Domain of unknown function DUF83; TIGRFAM: CRISPR-associated protein Cas4 YP_007315008.1 PFAM: Archaeal protein of unknown function (DUF911); TIGRFAM: CRISPR-associated protein Cas4/Csa1, subtype I-A/APERN YP_007315011.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: CRISPR-associated helicase Cas3; manually curated; non-canonical start codon YP_007315013.1 PFAM: CRISPR-associated negative autoregulator DevR/Csa2; TIGRFAM: CRISPR-associated autoregulator DevR family; CRISPR-associated protein Cas7/Csa2, subtype I-A/APERN YP_007315015.1 PFAM: Uncharacterized conserved protein (DUF2276) YP_007315016.1 PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; radical SAM methylthiotransferase, MiaB/RimO family YP_007315017.1 PFAM: Protein of unknown function (DUF964) YP_007315018.1 PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS YP_007315020.1 PFAM: MutL C terminal dimerisation domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL YP_007315021.1 PFAM: IPP transferase; TIGRFAM: tRNA dimethylallyltransferase YP_007315023.1 PFAM: ATPase family associated with various cellular activities (AAA); TIGRFAM: stage V sporulation protein K YP_007315024.1 PFAM: GTPase of unknown function YP_007315025.1 manually curated; non-canonical start codon YP_007315027.1 PFAM: LSM domain; TIGRFAM: RNA chaperone Hfq YP_007315028.1 PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase YP_007315030.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; TIGRFAM: PAS domain S-box YP_007315031.1 PFAM: Protein of unknown function (DUF445) YP_007315032.1 PFAM: S1 RNA binding domain; LytB protein; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming); ribosomal protein S1 YP_007315033.1 PFAM: Nucleoside recognition YP_007315035.1 PFAM: PHP domain YP_007315036.1 PFAM: MotA/TolQ/ExbB proton channel family YP_007315037.1 PFAM: Biopolymer transport protein ExbD/TolR YP_007315038.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain YP_007315039.1 PFAM: Cohesin domain YP_007315040.1 PFAM: S-layer homology domain YP_007315041.1 PFAM: Cell Wall Hydrolase YP_007315042.1 PFAM: tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: ATP phosphoribosyltransferase, regulatory subunit; histidyl-tRNA synthetase YP_007315043.1 PFAM: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase YP_007315044.1 PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase YP_007315045.1 PFAM: Imidazoleglycerol-phosphate dehydratase YP_007315046.1 PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit YP_007315047.1 PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase YP_007315048.1 PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit YP_007315049.1 PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-AMP cyclohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase YP_007315050.1 PFAM: Phage integrase family YP_007315051.1 PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG YP_007315052.1 PFAM: CheW-like domain YP_007315053.1 PFAM: CheW-like domain; P2 response regulator binding domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Signal transducing histidine kinase, homodimeric domain; Hpt domain YP_007315054.1 PFAM: Response regulator receiver domain YP_007315055.1 PFAM: CheB methylesterase; Response regulator receiver domain YP_007315056.1 PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit YP_007315057.1 PFAM: Toprim domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit YP_007315058.1 PFAM: Uncharacterized conserved protein (DUF2196); TIGRFAM: conserved hypothetical protein YP_007315059.1 PFAM: Methyltransferase domain YP_007315060.1 PFAM: Reverse transcriptase (RNA-dependent DNA polymerase) YP_007315061.1 PFAM: Fic/DOC family YP_007315062.1 PFAM: Fic/DOC family YP_007315063.1 PFAM: Nucleotidyltransferase domain YP_007315064.1 PFAM: Protein of unknown function DUF86 YP_007315066.1 PFAM: Methyltransferase domain YP_007315068.1 PFAM: Acetyltransferase (GNAT) family YP_007315069.1 PFAM: Rubrerythrin YP_007315070.1 PFAM: Protein of unknown function (DUF421) YP_007315076.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_007315077.1 PFAM: Methyltransferase domain YP_007315080.1 PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: asparaginyl-tRNA synthetase YP_007315081.1 PFAM: Aldehyde dehydrogenase family; Iron-containing alcohol dehydrogenase YP_007315083.1 PFAM: Citrate transporter; TrkA-C domain YP_007315084.1 PFAM: Eco57I restriction endonuclease YP_007315085.1 PFAM: Methyltransferase domain YP_007315086.1 PFAM: LysM domain YP_007315088.1 PFAM: Glycerate kinase family; TIGRFAM: glycerate kinase YP_007315089.1 PFAM: GntP family permease; TIGRFAM: gluconate transporter YP_007315090.1 PFAM: Spore germination protein; TIGRFAM: spore germination protein (amino acid permease) YP_007315091.1 PFAM: 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase YP_007315092.1 PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative YP_007315093.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: diaminopropionate ammonia-lyase family; diaminopropionate ammonia-lyase YP_007315094.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase; probable carbamoyltransferase YgeW YP_007315095.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: putative selenium metabolism hydrolase YP_007315096.1 PFAM: Permease family; TIGRFAM: uracil-xanthine permease; xanthine permease YP_007315097.1 PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YP_007315098.1 PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain YP_007315099.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain YP_007315100.1 PFAM: Amidohydrolase family YP_007315101.1 PFAM: Amidohydrolase family; TIGRFAM: putative selenium metabolism protein SsnA YP_007315102.1 PFAM: FAD binding domain in molybdopterin dehydrogenase; CO dehydrogenase flavoprotein C-terminal domain YP_007315103.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain YP_007315104.1 PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain YP_007315105.1 PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase YP_007315106.1 PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase (subfamily 1) family protein YP_007315107.1 PFAM: Amidohydrolase family; TIGRFAM: adenine deaminase YP_007315108.1 PFAM: Permease family YP_007315110.1 TIGRFAM: selenium-dependent molybdenum hydroxylase system protein, YqeB family YP_007315112.1 PFAM: XdhC and CoxI family YP_007315113.1 PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain YP_007315114.1 PFAM: Amidohydrolase family; TIGRFAM: D-hydantoinase; dihydroorotase, multifunctional complex type YP_007315115.1 PFAM: Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain YP_007315116.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthase (NADPH), homotetrameric YP_007315117.1 PFAM: Amino acid kinase family; TIGRFAM: carbamate kinase YP_007315119.1 PFAM: HTH domain; YheO-like PAS domain YP_007315120.1 PFAM: Ferric uptake regulator family YP_007315121.1 PFAM: Dinitrogenase iron-molybdenum cofactor YP_007315122.1 PFAM: Dinitrogenase iron-molybdenum cofactor YP_007315124.1 PFAM: Chromate transporter YP_007315125.1 PFAM: Domain of unknown function (DUF364) YP_007315126.1 PFAM: Bacterial regulatory protein, arsR family YP_007315127.1 PFAM: Protein of unknown function DUF134 YP_007315128.1 PFAM: Late competence development protein ComFB YP_007315129.1 PFAM: 'Cold-shock' DNA-binding domain YP_007315130.1 PFAM: 'Cold-shock' DNA-binding domain YP_007315132.1 PFAM: N-6 DNA Methylase YP_007315133.1 PFAM: Type I restriction modification DNA specificity domain YP_007315137.1 PFAM: UvrD/REP helicase YP_007315139.1 PFAM: Dynamin family YP_007315140.1 PFAM: Dynamin family YP_007315143.1 PFAM: Putative inner membrane protein (DUF1819) YP_007315144.1 PFAM: Domain of unknown function (DUF1788) YP_007315146.1 PFAM: Eco57I restriction endonuclease YP_007315147.1 PFAM: PglZ domain; TIGRFAM: TIGR02687 family protein YP_007315149.1 PFAM: OmpA family YP_007315151.1 PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain; Restriction endonuclease YP_007315153.1 PFAM: Protein of unknown function (DUF3298) YP_007315154.1 PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain; manually curated; non-canonical start codon YP_007315155.1 PFAM: Protein of unknown function (DUF805) YP_007315158.1 PFAM: Putative transposase, YhgA-like; TIGRFAM: conserved hypothetical protein (putative transposase or invertase) YP_007315159.1 PFAM: Plasmid pRiA4b ORF-3-like protein YP_007315161.1 PFAM: Viral (Superfamily 1) RNA helicase; TIGRFAM: helicase, putative, RecD/TraA family YP_007315162.1 PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family YP_007315163.1 PFAM: Protein of unknown function (DUF1232) YP_007315165.1 PFAM: Rhodanese-like domain YP_007315166.1 PFAM: Metallo-beta-lactamase superfamily; Intermediate filament tail domain YP_007315167.1 PFAM: Protein of unknown function (DUF3006) YP_007315168.1 PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase YP_007315169.1 PFAM: Acylphosphatase YP_007315170.1 PFAM: Calcineurin-like phosphoesterase; 5'-nucleotidase, C-terminal domain; LysM domain YP_007315171.1 PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; haloacid dehalogenase-like hydrolase; Cation transporter/ATPase, N-terminus; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; golgi membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; potassium and/or sodium efflux P-type ATPase, fungal-type; sarco/endoplasmic reticulum calcium-translocating P-type ATPase YP_007315173.1 PFAM: Family 4 glycosyl hydrolase; Family 4 glycosyl hydrolase C-terminal domain YP_007315175.1 PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain YP_007315176.1 PFAM: Iron-containing alcohol dehydrogenase YP_007315177.1 PFAM: Domain of unknown function (DUF296) YP_007315178.1 PFAM: Sodium:dicarboxylate symporter family YP_007315179.1 PFAM: Branched-chain amino acid transport protein (AzlD) YP_007315180.1 PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC YP_007315181.1 PFAM: Aminotransferase class I and II YP_007315182.1 PFAM: PBS lyase HEAT-like repeat YP_007315184.1 PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; TIGRFAM: glycogen/starch synthases, ADP-glucose type YP_007315186.1 PFAM: Domain of unknown function (DUF1957); Glycosyl hydrolase family 57 YP_007315187.1 PFAM: Carbohydrate phosphorylase; Protein of unknown function (DUF3417); TIGRFAM: alpha-glucan phosphorylases YP_007315188.1 PFAM: Protein of unknown function (DUF421) YP_007315190.1 PFAM: Domain of Unknown Function (DUF1540) YP_007315191.1 PFAM: HTH domain; 3H domain YP_007315192.1 PFAM: Quinolinate synthetase A protein; TIGRFAM: quinolinate synthetase complex, A subunit YP_007315193.1 PFAM: domain; FAD binding domain; TIGRFAM: L-aspartate oxidase YP_007315194.1 PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase YP_007315196.1 PFAM: Nucleotidyl transferase; Bacterial transferase hexapeptide (three repeats); TIGRFAM: glucose-1-phosphate adenylyltransferase, GlgD subunit; glucose-1-phosphate adenylyltransferase YP_007315197.1 PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase, GlgD subunit; glucose-1-phosphate adenylyltransferase YP_007315200.1 PFAM: Aminotransferase class I and II; TIGRFAM: aspartate 4-decarboxylase YP_007315202.1 PFAM: Protein of unknown function (DUF421) YP_007315203.1 PFAM: HAMP domain; Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_007315204.1 PFAM: Uncharacterised protein family (UPF0236) YP_007315205.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB YP_007315206.1 PFAM: Protein of unknown function (DUF3231); Coat F domain YP_007315207.1 PFAM: Rhodanese-like domain YP_007315208.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_007315209.1 PFAM: Inosine-uridine preferring nucleoside hydrolase YP_007315210.1 PFAM: Uncharacterised protein family (UPF0236) YP_007315211.1 PFAM: YeeE/YedE family (DUF395) YP_007315212.1 PFAM: SirA-like protein YP_007315213.1 PFAM: YeeE/YedE family (DUF395) YP_007315214.1 PFAM: CGGC domain YP_007315215.1 PFAM: CGGC domain YP_007315216.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Cysteine-rich domain YP_007315217.1 PFAM: SNARE associated Golgi protein YP_007315219.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007315220.1 PFAM: Binding-protein-dependent transport system inner membrane component; manually curated; non-canonical start codon YP_007315221.1 PFAM: ABC transporter; TOBE domain YP_007315222.1 PFAM: Glycosyl transferase family 2 YP_007315223.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2064) YP_007315224.1 PFAM: Phosphotransferase enzyme family YP_007315225.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; Propionate catabolism activator; PAS fold; TIGRFAM: PAS domain S-box YP_007315226.1 PFAM: SAF domain YP_007315227.1 PFAM: D-galactarate dehydratase / Altronate hydrolase, C terminus YP_007315228.1 PFAM: 2-keto-3-deoxygluconate permease; TIGRFAM: 2-keto-3-deoxygluconate transporter YP_007315229.1 PFAM: Protein of unknown function, DUF1537 YP_007315230.1 PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase YP_007315231.1 PFAM: RHS Repeat; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies) YP_007315233.1 PFAM: RHS Repeat; TIGRFAM: YD repeat (two copies) YP_007315234.1 TIGRFAM: RHS repeat-associated core domain YP_007315235.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase YP_007315236.1 PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase YP_007315239.1 PFAM: UvrD/REP helicase YP_007315240.1 PFAM: Nucleoside diphosphate kinase YP_007315242.1 PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain YP_007315243.1 PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28 YP_007315244.1 PFAM: Domain of unknown function (DUF1858); TIGRFAM: hybrid cluster protein-associated redox disulfide domain YP_007315245.1 PFAM: Protein of unknown function (DUF322) YP_007315246.1 PFAM: DAK2 domain; TIGRFAM: DAK2 domain fusion protein YloV YP_007315247.1 PFAM: Uncharacterised protein, DegV family COG1307; TIGRFAM: EDD domain protein, DegV family YP_007315248.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; OB-fold nucleic acid binding domain; TIGRFAM: ATP-dependent DNA helicase RecG YP_007315249.1 PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family YP_007315250.1 PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain YP_007315251.1 PFAM: Nucleoside recognition; TIGRFAM: sporulation integral membrane protein YlbJ YP_007315252.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Rhodanese-like domain YP_007315254.1 PFAM: Na+/H+ antiporter family YP_007315255.1 PFAM: Phosphorylase superfamily; TIGRFAM: purine-nucleoside phosphorylase, family 1 (deoD) YP_007315256.1 PFAM: Protein of unknown function (DUF3231) YP_007315257.1 PFAM: 4Fe-4S binding domain YP_007315258.1 PFAM: Thioredoxin YP_007315259.1 PFAM: Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Bacterial pullanase-associated domain YP_007315260.1 PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA YP_007315261.1 PFAM: Carboxymuconolactone decarboxylase family YP_007315262.1 PFAM: Hemerythrin HHE cation binding domain YP_007315263.1 PFAM: NifU-like domain YP_007315264.1 PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase YP_007315265.1 PFAM: Heavy-metal-associated domain YP_007315266.1 PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain YP_007315267.1 PFAM: YsiA-like protein, C-terminal region; Bacterial regulatory proteins, tetR family YP_007315268.1 PFAM: Cupin domain YP_007315269.1 TIGRFAM: RND family efflux transporter, MFP subunit YP_007315270.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium) YP_007315272.1 PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain YP_007315273.1 PFAM: Virulence factor EsxB; Formiminotransferase-cyclodeaminase YP_007315274.1 PFAM: Prismane/CO dehydrogenase family; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit YP_007315275.1 PFAM: Methyl-accepting chemotaxis protein (MCP) signaling domain YP_007315276.1 PFAM: HPP family YP_007315278.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain YP_007315280.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_007315281.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein YP_007315282.1 PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain YP_007315283.1 PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain YP_007315284.1 PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial; probable molybdenum cofactor biosynthesis protein A, archaeal YP_007315285.1 PFAM: MoaC family; MOSC domain; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC YP_007315286.1 PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain YP_007315287.1 PFAM: Molybdopterin guanine dinucleotide synthesis protein B; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein MobB YP_007315288.1 PFAM: Formate/nitrite transporter; TIGRFAM: formate/nitrite transporter YP_007315289.1 TIGRFAM: sulfite reductase, subunit A YP_007315290.1 PFAM: Oxidoreductase FAD-binding domain; Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain; TIGRFAM: sulfite reductase, subunit B YP_007315291.1 PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: sulfite reductase, subunit C YP_007315292.1 PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain YP_007315293.1 PFAM: Glutamyl-tRNAGlu reductase, N-terminal domain; Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase YP_007315294.1 TIGRFAM: siroheme synthase, N-terminal domain YP_007315295.1 PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase YP_007315296.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; Uroporphyrinogen-III synthase HemD; TIGRFAM: uroporphyrin-III C-methyltransferase YP_007315297.1 PFAM: Delta-aminolevulinic acid dehydratase YP_007315298.1 PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase YP_007315299.1 PFAM: CbiX YP_007315301.1 PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain YP_007315315.1 PFAM: Protein kinase domain YP_007315317.1 PFAM: NAD dependent epimerase/dehydratase family YP_007315318.1 PFAM: Glycosyl transferases group 1 YP_007315324.1 PFAM: Protein of unknown function (DUF1657) YP_007315325.1 PFAM: Protein of unknown function (DUF1657) YP_007315326.1 PFAM: Protein of unknown function (DUF1393) YP_007315327.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain YP_007315328.1 PFAM: Protein of unknown function (DUF1407) YP_007315329.1 PFAM: Alpha amylase, C-terminal all-beta domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase; manually curated; non-canonical start codon YP_007315330.1 PFAM: PGAP1-like protein YP_007315331.1 PFAM: Cell Wall Hydrolase YP_007315333.1 PFAM: Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase YP_007315335.1 PFAM: Thiamine transporter protein (Thia_YuaJ); TIGRFAM: putative proton-coupled thiamine transporter YuaJ YP_007315336.1 PFAM: Thiamin pyrophosphokinase, vitamin B1 binding domain; Thiamin pyrophosphokinase, catalytic domain; TIGRFAM: thiamine pyrophosphokinase YP_007315338.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YP_007315340.1 PFAM: Small, acid-soluble spore proteins, alpha/beta type YP_007315341.1 PFAM: Small, acid-soluble spore proteins, alpha/beta type YP_007315342.1 PFAM: Sodium/hydrogen exchanger family YP_007315343.1 PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase YP_007315344.1 PFAM: ThiS family; TIGRFAM: thiamine biosynthesis protein ThiS YP_007315345.1 PFAM: Thiazole biosynthesis protein ThiG YP_007315346.1 PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: thiazole biosynthesis protein ThiH YP_007315347.1 PFAM: ThiF family; TIGRFAM: thiamine biosynthesis protein ThiF, family 2 YP_007315348.1 PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase YP_007315349.1 PFAM: Methylenetetrahydrofolate reductase YP_007315350.1 PFAM: Pterin binding enzyme; B12 binding domain; Homocysteine S-methyltransferase; TIGRFAM: methylmalonyl-CoA mutase C-terminal domain; 5-methyltetrahydrofolate--homocysteine methyltransferase YP_007315351.1 PFAM: Vitamin B12 dependent methionine synthase, activation domain YP_007315353.1 PFAM: Bacterial extracellular solute-binding protein YP_007315354.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007315355.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007315356.1 PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain YP_007315357.1 PFAM: Glycosyl hydrolases family 43 YP_007315358.1 PFAM: Aldose 1-epimerase YP_007315359.1 PFAM: Bacterial extracellular solute-binding protein YP_007315360.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007315361.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007315362.1 PFAM: Major Facilitator Superfamily YP_007315363.1 PFAM: Bacterial extracellular solute-binding protein YP_007315364.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007315365.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007315366.1 PFAM: Beta-galactosidase trimerisation domain; Beta-galactosidase C-terminal domain; Beta-galactosidase YP_007315367.1 PFAM: ROK family; MarR family; TIGRFAM: ROK family protein (putative glucokinase) YP_007315368.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase YP_007315369.1 PFAM: Galactokinase galactose-binding signature; GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: galactokinase YP_007315370.1 manually curated; non-canonical start codon YP_007315371.1 PFAM: Melibiase YP_007315372.1 PFAM: Galactose-1-phosphate uridyl transferase, C-terminal domain; Galactose-1-phosphate uridyl transferase, N-terminal domain; TIGRFAM: galactose-1-phosphate uridylyltransferase, family 2 YP_007315373.1 PFAM: FxsA cytoplasmic membrane protein YP_007315374.1 PFAM: Adenylate and Guanylate cyclase catalytic domain; CHASE2 domain YP_007315375.1 PFAM: FecR protein YP_007315376.1 PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain YP_007315379.1 PFAM: Collagenase; Peptidase family U32 YP_007315380.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family YP_007315381.1 PFAM: Domain of Unknown Function (DUF1540) YP_007315384.1 PFAM: Polysaccharide biosynthesis protein; TIGRFAM: stage V sporulation protein B; manually curated; non-canonical start codon YP_007315385.1 PFAM: Phosphomannose isomerase type I; TIGRFAM: mannose-6-phosphate isomerase, class I YP_007315387.1 PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: methionine gamma-lyase; O-succinylhomoserine sulfhydrylase YP_007315389.1 PFAM: Thiamine biosynthesis protein (ThiI); THUMP domain; TIGRFAM: thiazole biosynthesis/tRNA modification protein ThiI YP_007315390.1 PFAM: Aminotransferase class-V YP_007315391.1 PFAM: Domain of unknown function DUF77; TIGRFAM: uncharacterized protein, MTH1187 family YP_007315392.1 PFAM: Radical SAM superfamily YP_007315393.1 PFAM: Protein of unknown function (DUF2721) YP_007315394.1 PFAM: Protein of unknown function (DUF2721) YP_007315395.1 PFAM: Domain of unknown function DUF20 YP_007315396.1 PFAM: impB/mucB/samB family C-terminal; IMS family HHH motif; impB/mucB/samB family YP_007315397.1 PFAM: Predicted permease YP_007315398.1 PFAM: ABC transporter YP_007315399.1 TIGRFAM: RND family efflux transporter, MFP subunit YP_007315400.1 PFAM: Outer membrane efflux protein YP_007315401.1 PFAM: Outer membrane efflux protein YP_007315402.1 PFAM: Uncharacterised ACR, YkgG family COG1556 YP_007315403.1 PFAM: MarR family YP_007315404.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_007315405.1 PFAM: Protein of unknown function (DUF1385) YP_007315406.1 PFAM: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) YP_007315408.1 TIGRFAM: spore photoproduct lyase YP_007315409.1 PFAM: Asparaginase; TIGRFAM: L-asparaginases, type I; L-asparaginases, type II YP_007315410.1 PFAM: M42 glutamyl aminopeptidase YP_007315411.1 PFAM: M42 glutamyl aminopeptidase YP_007315412.1 PFAM: M42 glutamyl aminopeptidase YP_007315415.1 PFAM: Uncharacterised protein family (UPF0182); manually curated; non-canonical start codon YP_007315416.1 PFAM: von Willebrand factor type A domain YP_007315417.1 PFAM: Na+/H+ antiporter family; manually curated; non-canonical start codon YP_007315420.1 PFAM: Divergent polysaccharide deacetylase YP_007315421.1 PFAM: Domain of unknown function DUF YP_007315422.1 PFAM: Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) YP_007315423.1 PFAM: Uncharacterised protein, DegV family COG1307; TIGRFAM: EDD domain protein, DegV family YP_007315424.1 PFAM: Aminotransferase class I and II YP_007315425.1 PFAM: AsnC family YP_007315426.1 PFAM: Methylpurine-DNA glycosylase (MPG); TIGRFAM: DNA-3-methyladenine glycosylase (3mg) YP_007315427.1 PFAM: Protein of unknown function, DUF255 YP_007315429.1 PFAM: Glutathionylspermidine synthase YP_007315430.1 PFAM: Glutamate-cysteine ligase family 2(GCS2); TIGRFAM: glutamate--cysteine ligase, plant type YP_007315431.1 TIGRFAM: lactoylglutathione lyase YP_007315432.1 PFAM: Transglycosylase SLT domain YP_007315433.1 PFAM: Domain of unknown function (DUF378) YP_007315435.1 manually curated YP_007315436.1 PFAM: Carbon starvation protein CstA YP_007315437.1 PFAM: Response regulator receiver domain; LytTr DNA-binding domain YP_007315438.1 PFAM: Histidine kinase; 5TMR of 5TMR-LYT; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_007315439.1 PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases YP_007315440.1 PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase YP_007315441.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family YP_007315442.1 PFAM: Citrate transporter; TrkA-C domain YP_007315443.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase YP_007315444.1 PFAM: Prephenate dehydrogenase YP_007315445.1 PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase YP_007315446.1 PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase YP_007315447.1 PFAM: Chorismate mutase type I; TIGRFAM: monofunctional chorismate mutase, gram positive type, clade 1 YP_007315448.1 PFAM: HutP YP_007315451.1 PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family YP_007315452.1 PFAM: RNase3 domain; Double-stranded RNA binding motif; TIGRFAM: ribonuclease III, bacterial YP_007315453.1 PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II YP_007315454.1 PFAM: 2-nitropropane dioxygenase YP_007315455.1 PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein YP_007315456.1 PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase YP_007315457.1 PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase YP_007315458.1 PFAM: 2-nitropropane dioxygenase; TIGRFAM: putative enoyl-[acyl-carrier-protein] reductase II YP_007315459.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III YP_007315460.1 PFAM: Fatty acid synthesis protein; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX YP_007315461.1 PFAM: MaoC like domain YP_007315462.1 PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32 YP_007315463.1 PFAM: Uncharacterized ACR, COG1399 YP_007315464.1 PFAM: Acetokinase family; TIGRFAM: acetate kinase YP_007315465.1 PFAM: Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate acetyltransferase YP_007315466.1 PFAM: Protein of unknown function (DUF795) YP_007315467.1 PFAM: PDZ domain (Also known as DHR or GLGF); Lon protease (S16) C-terminal proteolytic domain YP_007315468.1 PFAM: Patatin-like phospholipase YP_007315470.1 PFAM: MGS-like domain; TIGRFAM: methylglyoxal synthase YP_007315471.1 PFAM: Glycosyl hydrolases family 31 YP_007315472.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_007315473.1 PFAM: Protein of unknown function (DUF3343) YP_007315474.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: selenium donor protein YP_007315476.1 PFAM: Membrane dipeptidase (Peptidase family M19) YP_007315477.1 PFAM: FAD binding domain; TIGRFAM: geranylgeranyl reductase family YP_007315478.1 PFAM: Protein kinase domain YP_007315479.1 PFAM: Rhodanese-like domain; TIGRFAM: tRNA 2-selenouridine synthase YP_007315480.1 PFAM: Transposase DDE domain YP_007315482.1 PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb) YP_007315484.1 PFAM: Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate--alanine ligase YP_007315486.1 PFAM: Predicted membrane-bound metal-dependent hydrolase (DUF457) YP_007315487.1 PFAM: Ribonucleotide reductase, all-alpha domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent YP_007315488.1 PFAM: Uncharacterised BCR, COG1937 YP_007315489.1 PFAM: Thioredoxin; TIGRFAM: thioredoxin YP_007315490.1 PFAM: Protein of unknown function, DUF606 YP_007315491.1 PFAM: Phosphotransferase system, EIIC; phosphotransferase system, EIIB; TIGRFAM: PTS system, glucose-like IIB component YP_007315492.1 PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family YP_007315493.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1; TIGRFAM: PTS system, glucose subfamily, IIA component YP_007315494.1 PFAM: Phosphotransferase system, EIIC; phosphotransferase system, EIIB; TIGRFAM: PTS system, glucose-like IIB component; PTS system, glucose-specific IIBC component YP_007315495.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1; TIGRFAM: PTS system, glucose subfamily, IIA component YP_007315496.1 PFAM: CAT RNA binding domain; PRD domain YP_007315497.1 PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family; stage V sporulation protein T YP_007315503.1 PFAM: Transcriptional regulator PadR-like family YP_007315505.1 PFAM: Bacterial regulatory protein, arsR family YP_007315506.1 PFAM: Methyltransferase domain YP_007315507.1 PFAM: 4Fe-4S binding domain YP_007315508.1 PFAM: Methyltransferase domain YP_007315509.1 PFAM: LysM domain YP_007315511.1 PFAM: Uncharacterised protein family (UPF0157) YP_007315512.1 PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain YP_007315513.1 PFAM: SpoVT / AbrB like domain; TIGRFAM: putative addiction module antidote; looped-hinge helix DNA binding domain, AbrB family YP_007315514.1 PFAM: Fic/DOC family; TIGRFAM: death-on-curing family protein YP_007315516.1 PFAM: Transposase YP_007315517.1 PFAM: Integrase core domain YP_007315520.1 PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain YP_007315521.1 PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain YP_007315522.1 PFAM: Protein of unknown function (Hypoth_ymh); TIGRFAM: TIGR02391 family protein YP_007315525.1 PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain; manually curated; non-canonical start codon YP_007315526.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthases, NADH/NADPH, small subunit YP_007315527.1 PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II YP_007315529.1 PFAM: Protein of unknown function (DUF1212) YP_007315531.1 PFAM: HD domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_007315532.1 PFAM: Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: lon-related putative ATP-dependent protease YP_007315533.1 PFAM: TrkA-N domain; Ion channel YP_007315534.1 PFAM: Ferritin-like domain YP_007315535.1 PFAM: Glucose inhibited division protein A YP_007315537.1 PFAM: Major Facilitator Superfamily YP_007315539.1 PFAM: Protein of unknown function (DUF441) YP_007315540.1 PFAM: D-alanyl-D-alanine carboxypeptidase YP_007315541.1 PFAM: Bacterial extracellular solute-binding protein YP_007315542.1 PFAM: Putative peptidoglycan binding domain; L,D-transpeptidase catalytic domain YP_007315543.1 PFAM: 2-phosphosulpholactate phosphatase; TIGRFAM: 2-phosphosulfolactate phosphatase YP_007315544.1 PFAM: (2R)-phospho-3-sulfolactate synthase (ComA) YP_007315545.1 PFAM: Protein of unknown function (DUF2619) YP_007315546.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_007315548.1 PFAM: Acylphosphatase YP_007315549.1 PFAM: Response regulator receiver domain YP_007315550.1 PFAM: Recombination protein U; TIGRFAM: recombination protein U YP_007315552.1 PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter YP_007315553.1 PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase YP_007315554.1 PFAM: Glycosyl transferase family 2 YP_007315555.1 PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF) YP_007315556.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase YP_007315557.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain YP_007315558.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_007315559.1 PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family YP_007315560.1 PFAM: TrkA-N domain; TrkA-C domain YP_007315561.1 PFAM: General secretion pathway protein K YP_007315562.1 TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies); manually curated; non-canonical start codon YP_007315565.1 TIGRFAM: RHS repeat-associated core domain YP_007315569.1 PFAM: Transposase YP_007315570.1 PFAM: Integrase core domain YP_007315573.1 PFAM: RHS Repeat; TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies) YP_007315575.1 PFAM: Protein of unknown function (DUF2012) YP_007315577.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_007315578.1 PFAM: Alpha amylase, catalytic domain YP_007315579.1 PFAM: Glycosyl hydrolase family 65 central catalytic domain; Glycosyl hydrolase family 65, N-terminal domain YP_007315580.1 PFAM: Bacterial extracellular solute-binding protein YP_007315581.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007315582.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007315583.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; beta-phosphoglucomutase; beta-phosphoglucomutase family hydrolase; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E YP_007315584.1 PFAM: Amylo-alpha-1,6-glucosidase YP_007315585.1 PFAM: short chain dehydrogenase YP_007315586.1 PFAM: Glycosyl hydrolase family 65, C-terminal domain; Glycosyl hydrolase family 65 central catalytic domain; Glycosyl hydrolase family 65, N-terminal domain YP_007315587.1 PFAM: Bacterial extracellular solute-binding protein YP_007315588.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007315589.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007315590.1 PFAM: Polyketide cyclase / dehydrase and lipid transport YP_007315591.1 PFAM: HNH endonuclease YP_007315592.1 PFAM: Aminotransferase class-III; TIGRFAM: putrescine aminotransferase; acetylornithine and succinylornithine transaminases YP_007315593.1 PFAM: DHHA1 domain; DHH family; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ YP_007315594.1 TIGRFAM: radical SAM additional 4Fe4S-binding domain YP_007315595.1 PFAM: UvrD/REP helicase YP_007315597.1 PFAM: Helix-turn-helix domain; Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region YP_007315598.1 PFAM: Protein of unknown function (DUF3231) YP_007315599.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_007315600.1 PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast YP_007315601.1 PFAM: Transaldolase; TIGRFAM: fructose-6-phosphate aldolase, TalC/MipB family YP_007315602.1 PFAM: Na+ dependent nucleoside transporter C-terminus; Na+ dependent nucleoside transporter N-terminus; Nucleoside recognition; TIGRFAM: nucleoside transporter YP_007315603.1 PFAM: DeoC/LacD family aldolase; TIGRFAM: deoxyribose-phosphate aldolase YP_007315604.1 PFAM: Protein of unknown function (DUF1427); TIGRFAM: XapX domain YP_007315605.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric YP_007315606.1 PFAM: Glycosyl transferase family, a/b domain; Pyrimidine nucleoside phosphorylase C-terminal domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: pyrimidine-nucleoside phosphorylase YP_007315607.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family YP_007315608.1 TIGRFAM: RND family efflux transporter, MFP subunit YP_007315609.1 PFAM: Outer membrane efflux protein YP_007315610.1 PFAM: YsiA-like protein, C-terminal region; Bacterial regulatory proteins, tetR family YP_007315611.1 PFAM: Major Facilitator Superfamily YP_007315612.1 PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain; manually curated; non-canonical start codon YP_007315614.1 PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: homoserine kinase YP_007315615.1 PFAM: ACT domain; Amino acid kinase family; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase YP_007315616.1 PFAM: Homoserine dehydrogenase, NAD binding domain; Homoserine dehydrogenase; ACT domain YP_007315617.1 PFAM: ACT domain YP_007315618.1 PFAM: Aminotransferase class IV; TIGRFAM: aminodeoxychorismate lyase; branched-chain amino acid aminotransferase, group I; D-amino acid aminotransferase YP_007315619.1 PFAM: Bacterial DNA-binding protein YP_007315620.1 PFAM: Stage IV sporulation protein A (spore_IV_A); TIGRFAM: stage IV sporulation protein A YP_007315621.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus YP_007315622.1 PFAM: Domain of unknown function (DUF205); TIGRFAM: acyl-phosphate glycerol 3-phosphate acyltransferase YP_007315623.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain YP_007315624.1 PFAM: PDZ domain (Also known as DHR or GLGF); Protein of unknown function (DUF512); TIGRFAM: putative FeS-containing Cyanobacterial-specific oxidoreductase YP_007315625.1 PFAM: Protein of unknown function (DUF3189) YP_007315626.1 PFAM: Protein of unknown function (DUF3189) YP_007315629.1 PFAM: Protein of unknown function (DUF1614) YP_007315630.1 PFAM: Stage V sporulation protein S (SpoVS) YP_007315631.1 PFAM: KH domain; HD domain; Domain of unknown function (DUF3552); TIGRFAM: conserved hypothetical protein YmdA/YtgF; uncharacterized domain HDIG YP_007315636.1 PFAM: RecX family YP_007315637.1 PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA YP_007315638.1 PFAM: 2',5' RNA ligase family; TIGRFAM: 2'-5' RNA ligase YP_007315640.1 PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-terminal domain; molybdenum cofactor synthesis domain YP_007315641.1 TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region YP_007315644.1 PFAM: Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH YP_007315646.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold YP_007315647.1 PFAM: Phosphatidylglycerophosphatase A YP_007315648.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_007315649.1 PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: ribosomal protein S12 methylthiotransferase RimO; radical SAM methylthiotransferase, MiaB/RimO family YP_007315653.1 PFAM: LysM domain YP_007315654.1 PFAM: Predicted metal-binding protein (DUF2103) YP_007315655.1 PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain; manually curated; non-canonical start codon YP_007315656.1 PFAM: Lyase; TIGRFAM: argininosuccinate lyase YP_007315657.1 PFAM: Acetyltransferase (GNAT) family YP_007315658.1 PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase YP_007315659.1 PFAM: Acetyltransferase (GNAT) family; TIGRFAM: putative beta-lysine N-acetyltransferase YP_007315660.1 PFAM: Lysine-2,3-aminomutase; Radical SAM superfamily; TIGRFAM: KamA family protein; lysine-2,3-aminomutase YP_007315661.1 PFAM: Sulfate transporter family; STAS domain; TIGRFAM: high affinity sulphate transporter 1 YP_007315662.1 PFAM: Ferric uptake regulator family YP_007315663.1 PFAM: ABC 3 transport family YP_007315664.1 PFAM: ABC transporter YP_007315665.1 PFAM: Periplasmic solute binding protein family YP_007315666.1 PFAM: Putative peptidoglycan binding domain; Peptidase family M23; LysM domain YP_007315668.1 PFAM: PilZ domain YP_007315669.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold YP_007315670.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal YP_007315671.1 PFAM: Polynucleotide kinase 3 phosphatase; TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; histidinol-phosphate phosphatase family domain YP_007315672.1 PFAM: Aminotransferase class I and II; Bacterial regulatory proteins, gntR family YP_007315673.1 PFAM: SOR/SNZ family; TIGRFAM: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 YP_007315674.1 PFAM: SNO glutamine amidotransferase family; TIGRFAM: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 YP_007315675.1 PFAM: pfkB family carbohydrate kinase; TIGRFAM: 1-phosphofructokinase; hexose kinase, 1-phosphofructokinase family YP_007315676.1 PFAM: Na+/H+ antiporter family YP_007315677.1 PFAM: Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box YP_007315679.1 PFAM: Protein of unknown function (DUF1446) YP_007315680.1 PFAM: Methylaspartate ammonia-lyase C-terminus; Methylaspartate ammonia-lyase N-terminus; TIGRFAM: methylaspartate ammonia-lyase YP_007315681.1 PFAM: Methylaspartate mutase E chain (MutE); TIGRFAM: methylaspartate mutase, E subunit YP_007315682.1 TIGRFAM: conserved hypothetical protein YP_007315683.1 PFAM: B12 binding domain; TIGRFAM: methylaspartate mutase, S subunit; methylmalonyl-CoA mutase C-terminal domain YP_007315684.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_007315685.1 PFAM: Conserved region in glutamate synthase YP_007315686.1 PFAM: PHP domain YP_007315687.1 PFAM: PspC domain YP_007315688.1 PFAM: Oligopeptidase F; Peptidase family M3; TIGRFAM: oligoendopeptidase F YP_007315689.1 PFAM: Homoserine O-succinyltransferase; TIGRFAM: homoserine O-succinyltransferase YP_007315690.1 PFAM: Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Bacterial pullanase-associated domain; TIGRFAM: pullulanase, type I YP_007315691.1 PFAM: Domain of unknown function (DUF3372); Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; Bacterial pullanase-associated domain; TIGRFAM: pullulanase, type I YP_007315692.1 PFAM: EAL domain; CBS domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain YP_007315693.1 PFAM: Conserved hypothetical protein 698; TIGRFAM: conserved hypothetical integral membrane protein YP_007315694.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_007315695.1 PFAM: 5'-nucleotidase, C-terminal domain; Calcineurin-like phosphoesterase; LysM domain YP_007315696.1 PFAM: 5'-nucleotidase, C-terminal domain; Calcineurin-like phosphoesterase YP_007315700.1 PFAM: Domain of unknown function (DUF307) YP_007315707.1 PFAM: Amidohydrolase family YP_007315710.1 PFAM: LysM domain; L,D-transpeptidase catalytic domain YP_007315711.1 PFAM: Cache domain; HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_007315712.1 PFAM: Uncharacterized conserved protein (DUF2088) YP_007315713.1 PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase YP_007315716.1 PFAM: ATP cone domain; TIGRFAM: transcriptional regulator NrdR YP_007315717.1 PFAM: PRC-barrel domain; TIGRFAM: sporulation protein, YlmC/YmxH family YP_007315718.1 PFAM: Stage II sporulation protein R (spore_II_R); TIGRFAM: stage II sporulation protein R YP_007315719.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-G factor; RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily YP_007315720.1 PFAM: LysM domain YP_007315721.1 PFAM: Phosphoglycerate mutase family; TIGRFAM: alpha-ribazole phosphatase YP_007315722.1 PFAM: NADPH-dependent FMN reductase YP_007315723.1 PFAM: MarR family YP_007315724.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_007315725.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein YP_007315727.1 PFAM: Aminotransferase class I and II; TIGRFAM: L-threonine-O-3-phosphate decarboxylase; histidinol-phosphate aminotransferase YP_007315728.1 PFAM: Helix-turn-helix domain; Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region YP_007315730.1 PFAM: GHMP kinases C terminal YP_007315731.1 PFAM: Cobalamin-5-phosphate synthase; TIGRFAM: cobalamin 5'-phosphate synthase/cobalamin synthase YP_007315732.1 PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; TIGRFAM: cob(I)alamin adenosyltransferase YP_007315733.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyrinic acid a,c-diamide synthase YP_007315734.1 PFAM: CobD/Cbib protein; TIGRFAM: cobalamin biosynthesis protein CobD YP_007315735.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyric acid synthase CobQ YP_007315736.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: cobyric acid synthase CobQ YP_007315737.1 PFAM: Cobinamide kinase / cobinamide phosphate guanyltransferase YP_007315739.1 PFAM: Phosphoribosyltransferase; TIGRFAM: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_007315740.1 PFAM: ABC transporter YP_007315741.1 PFAM: FecCD transport family YP_007315742.1 PFAM: Periplasmic binding protein YP_007315743.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_007315744.1 PFAM: Putative glycosyl hydrolase of unknown function (DUF1680) YP_007315745.1 PFAM: ABC transporter; ABC transporter transmembrane region YP_007315746.1 PFAM: ABC transporter transmembrane region; ABC transporter YP_007315747.1 PFAM: Glycosyl hydrolases family 43 YP_007315748.1 PFAM: Alpha-L-arabinofuranosidase C-terminus YP_007315749.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_007315751.1 PFAM: Carbohydrate binding module (family 6) YP_007315752.1 PFAM: Glycosyl hydrolases family 43 YP_007315753.1 PFAM: Glycosyl hydrolases family 43 YP_007315754.1 PFAM: Glycosyl hydrolases family 43 YP_007315756.1 PFAM: Alpha-L-arabinofuranosidase C-terminus YP_007315757.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_007315758.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_007315759.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007315760.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007315761.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_007315762.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_007315763.1 PFAM: Glycosyl hydrolases family 43 YP_007315764.1 PFAM: Major Facilitator Superfamily YP_007315765.1 PFAM: Aldose 1-epimerase YP_007315766.1 PFAM: Aldo/keto reductase family YP_007315767.1 PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast YP_007315768.1 PFAM: Transaldolase; TIGRFAM: fructose-6-phosphate aldolase, TalC/MipB family YP_007315769.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: phosphoglycolate/pyridoxal phosphate phosphatase family; Haloacid Dehalogenase Superfamily Class (subfamily) IIA; HAD-superfamily class IIA hydrolase, TIGR01459 YP_007315770.1 PFAM: 3-dehydroquinate synthase YP_007315771.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain YP_007315772.1 PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase YP_007315773.1 PFAM: L-arabinose isomerase; L-arabinose isomerase C-terminal domain YP_007315774.1 PFAM: Bacterial regulatory proteins, gntR family; family YP_007315776.1 PFAM: Putative glycosyl hydrolase of unknown function (DUF1680) YP_007315777.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007315778.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007315779.1 PFAM: Bacterial extracellular solute-binding protein YP_007315780.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_007315781.1 PFAM: Ribbon-helix-helix protein, copG family; NikR C terminal nickel binding domain; TIGRFAM: nickel-responsive transcriptional regulator NikR YP_007315782.1 PFAM: ABC transporter YP_007315783.1 PFAM: Cobalt transport protein YP_007315785.1 PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM YP_007315786.1 PFAM: Mechanosensitive ion channel YP_007315787.1 PFAM: Polyprenyl synthetase YP_007315789.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-E factor YP_007315790.1 PFAM: Sporulation factor SpoIIGA; TIGRFAM: sigma-E processing peptidase SpoIIGA YP_007315791.1 PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ YP_007315792.1 PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA YP_007315793.1 PFAM: Cell division protein FtsQ; POTRA domain, FtsQ-type YP_007315794.1 PFAM: D-ala D-ala ligase C-terminus; D-ala D-ala ligase N-terminus; TIGRFAM: D-alanine--D-alanine ligase YP_007315795.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_007315796.1 PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase YP_007315797.1 PFAM: Glycosyltransferase family 28 N-terminal domain; Glycosyltransferase family 28 C-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase YP_007315798.1 PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA; stage V sporulation protein E; cell division protein FtsW YP_007315799.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_007315800.1 PFAM: Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1; Glycosyl transferase family 4; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase YP_007315801.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase YP_007315802.1 PFAM: Mur ligase family, catalytic domain; Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase YP_007315803.1 PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; PASTA domain; TIGRFAM: stage V sporulation protein D YP_007315804.1 PFAM: Septum formation initiator; TIGRFAM: cell division protein FtsL YP_007315805.1 PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW YP_007315806.1 PFAM: Membrane protein of unknown function (DUF340); manually curated YP_007315807.1 PFAM: Membrane protein of unknown function (DUF340); manually curated YP_007315808.1 PFAM: Bacterial type II/III secretion system short domain; LysM domain; Bacterial type II and III secretion system protein YP_007315810.1 PFAM: Pilus assembly protein, PilO YP_007315811.1 PFAM: Fimbrial assembly protein (PilN) YP_007315812.1 PFAM: Competence protein A; TIGRFAM: type IV pilus assembly protein PilM YP_007315814.1 TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_007315815.1 TIGRFAM: prepilin-type N-terminal cleavage/methylation domain YP_007315816.1 PFAM: Bacterial Peptidase A24 N-terminal domain; Type IV leader peptidase family YP_007315817.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: general secretion pathway protein G; prepilin-type N-terminal cleavage/methylation domain YP_007315818.1 PFAM: Bacterial type II secretion system protein F domain; TIGRFAM: general secretion pathway protein F; manually curated; non-canonical start codon YP_007315819.1 PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT YP_007315820.1 PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain; TIGRFAM: type IV-A pilus assembly ATPase PilB; general secretory pathway protein E YP_007315821.1 PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase YP_007315822.1 PFAM: NifU-like N terminal domain; TIGRFAM: FeS cluster assembly scaffold protein NifU, Clostridium type YP_007315823.1 PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS YP_007315824.1 PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein YP_007315825.1 PFAM: Uncharacterized protein family UPF0029; Domain of unknown function (DUF1949); TIGRFAM: uncharacterized protein, YigZ family YP_007315826.1 PFAM: MgsA AAA+ ATPase C terminal; Holliday junction DNA helicase ruvB N-terminus YP_007315827.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB YP_007315828.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB; sucrose-phosphate phosphatase subfamily YP_007315829.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB YP_007315830.1 PFAM: Domain of unknown function (DUF1906) YP_007315831.1 PFAM: Galactose-1-phosphate uridyl transferase, C-terminal domain; Galactose-1-phosphate uridyl transferase, N-terminal domain; TIGRFAM: galactose-1-phosphate uridylyltransferase, family 1 YP_007315832.1 PFAM: Sucrose synthase; Glycosyl transferases group 1; TIGRFAM: sucrose-phosphate synthase, putative, glycosyltransferase domain YP_007315833.1 PFAM: pfkB family carbohydrate kinase YP_007315834.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007315835.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007315836.1 PFAM: Bacterial extracellular solute-binding protein YP_007315837.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_007315838.1 PFAM: Glycosyl hydrolase family 65, C-terminal domain; Glycosyl hydrolase family 65 central catalytic domain; Glycosyl hydrolase family 65, N-terminal domain YP_007315840.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007315841.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007315842.1 PFAM: Bacterial extracellular solute-binding protein YP_007315843.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_007315844.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; beta-phosphoglucomutase; beta-phosphoglucomutase family hydrolase; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E YP_007315845.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase YP_007315846.1 PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain; manually curated; non-canonical start codon YP_007315847.1 PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type YP_007315848.1 PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase YP_007315849.1 PFAM: Tetratricopeptide repeat; PPIC-type PPIASE domain YP_007315850.1 PFAM: Radical SAM superfamily; TIGRFAM: coproporphyrinogen dehydrogenase HemZ YP_007315851.1 PFAM: Metallo-beta-lactamase superfamily YP_007315852.1 PFAM: HD domain; ACT domain; TGS domain; Region found in RelA / SpoT proteins; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family YP_007315853.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase YP_007315854.1 PFAM: DHH family; DHHA1 domain; DEAD/DEAH box helicase; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ YP_007315855.1 PFAM: Phosphotransferase enzyme family; ABC1 family YP_007315856.1 PFAM: Protein of unknown function (DUF456) YP_007315858.1 PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF YP_007315859.1 PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family YP_007315860.1 PFAM: HD domain YP_007315861.1 PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type YP_007315862.1 PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit YP_007315863.1 PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming YP_007315864.1 PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_007315865.1 PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit YP_007315866.1 PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit YP_007315868.1 PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family YP_007315869.1 PFAM: Prephenate dehydratase; ACT domain YP_007315870.1 PFAM: RNase H YP_007315871.1 PFAM: Putative zinc ribbon domain YP_007315872.1 PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family YP_007315873.1 PFAM: Family of unknown function (DUF633) YP_007315874.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 factor, region 1.1; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain YP_007315875.1 PFAM: Toprim domain; CHC2 zinc finger; DNA primase catalytic core, N-terminal domain; DnaB-helicase binding domain of primase; TIGRFAM: DNA primase, catalytic core YP_007315876.1 PFAM: Domain of unknown function (DUF299) YP_007315877.1 PFAM: HTH domain; CBS domain YP_007315878.1 PFAM: Bacterial fructose-1,6-bisphosphatase, glpX-encoded; TIGRFAM: fructose-1,6-bisphosphatase, class II YP_007315880.1 PFAM: Glycyl-tRNA synthetase beta subunit; DALR anticodon binding domain; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, beta subunit YP_007315881.1 PFAM: Glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, alpha subunit YP_007315883.1 PFAM: Recombination protein O C terminal; Recombination protein O N terminal; TIGRFAM: DNA repair protein RecO YP_007315884.1 PFAM: DeoC/LacD family aldolase; TIGRFAM: deoxyribose-phosphate aldolase YP_007315885.1 PFAM: KH domain; GTPase of unknown function; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain YP_007315886.1 PFAM: Acetyltransferase (GNAT) family YP_007315887.1 PFAM: Protein of unknown function (DUF502) YP_007315888.1 PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; TIGRFAM: gliding motility-associated protein GldE YP_007315889.1 PFAM: Prokaryotic diacylglycerol kinase; PAP2 superfamily YP_007315890.1 PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family YP_007315891.1 PFAM: 7TM-HD extracellular; HD domain; 7TM receptor with intracellular HD hydrolase; TIGRFAM: uncharacterized domain HDIG YP_007315892.1 PFAM: PhoH-like protein YP_007315893.1 PFAM: Putative stage IV sporulation protein YqfD; TIGRFAM: sporulation protein YqfD YP_007315894.1 PFAM: YabP family; TIGRFAM: sporulation protein YqfC YP_007315895.1 PFAM: Yqey-like protein YP_007315896.1 PFAM: HIT domain YP_007315897.1 PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme; tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; radical SAM methylthiotransferase, MiaB/RimO family YP_007315898.1 PFAM: HNH endonuclease YP_007315899.1 PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family YP_007315900.1 PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase YP_007315901.1 PFAM: DnaJ C terminal region; DnaJ central domain (4 repeats); DnaJ domain; TIGRFAM: chaperone protein DnaJ YP_007315902.1 PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK YP_007315903.1 PFAM: GrpE YP_007315904.1 PFAM: HrcA protein C terminal domain; TIGRFAM: heat shock gene repressor HrcA YP_007315905.1 PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase YP_007315906.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain YP_007315907.1 PFAM: Stage II sporulation protein P (SpoIIP); TIGRFAM: stage II sporulation protein P YP_007315908.1 PFAM: Germination protease; TIGRFAM: GPR endopeptidase YP_007315909.1 PFAM: Membrane protein of unknown function YP_007315910.1 PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20 YP_007315911.1 PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit YP_007315912.1 PFAM: Small, acid-soluble spore proteins, alpha/beta type YP_007315913.1 PFAM: Small, acid-soluble spore proteins, alpha/beta type YP_007315914.1 PFAM: Cysteine-rich secretory protein family; LysM domain; TIGRFAM: spore coat assembly protein SafA; uncharacterized protein, YkwD family YP_007315915.1 PFAM: Competence protein; Metallo-beta-lactamase superfamily; TIGRFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2 YP_007315916.1 PFAM: SLBB domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; comEA protein YP_007315917.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family YP_007315918.1 PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein YP_007315919.1 PFAM: Cell envelope-related transcriptional attenuator domain; TIGRFAM: cell envelope-related function transcriptional attenuator common domain YP_007315920.1 PFAM: HD domain; TIGRFAM: putative HD superfamily hydrolase of NAD metabolism; uncharacterized domain HDIG YP_007315921.1 PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain YP_007315923.1 PFAM: TrkA-N domain; TrkA-C domain YP_007315924.1 PFAM: Cation transport protein YP_007315925.1 PFAM: Hsp33 protein YP_007315926.1 PFAM: PHP domain YP_007315927.1 PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG YP_007315928.1 PFAM: Transglutaminase-like superfamily YP_007315930.1 PFAM: Outer membrane efflux protein YP_007315931.1 PFAM: Outer membrane efflux protein YP_007315933.1 PFAM: ABC transporter; ABC transporter transmembrane region; Peptidase C39 family; TIGRFAM: ABC-type bacteriocin transporter; type I secretion system ABC transporter, HlyB family YP_007315934.1 PFAM: Integrase core domain YP_007315935.1 PFAM: Transposase YP_007315937.1 TIGRFAM: bacteriocin-type signal sequence YP_007315939.1 PFAM: Integrase core domain YP_007315940.1 PFAM: Transposase YP_007315946.1 PFAM: CAAX amino terminal protease family YP_007315950.1 PFAM: Bacterial regulatory proteins, luxR family YP_007315952.1 PFAM: Bacteriocin class II with double-glycine leader peptide YP_007315955.1 TIGRFAM: bacteriocin-type signal sequence YP_007315961.1 TIGRFAM: class IIb bacteriocin, lactobin A/cerein 7B family YP_007315963.1 PFAM: Bacterial regulatory proteins, luxR family YP_007315964.1 PFAM: CAAX amino terminal protease family YP_007315966.1 manually curated; non-canonical start codon YP_007315967.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase YP_007315968.1 PFAM: Prolipoprotein diacylglyceryl transferase YP_007315969.1 PFAM: AhpC/TSA family YP_007315970.1 PFAM: Cytochrome C biogenesis protein transmembrane region YP_007315971.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase YP_007315972.1 PFAM: PUA domain; Amino acid kinase family; TIGRFAM: glutamate 5-kinase YP_007315973.1 PFAM: CRS1 / YhbY (CRM) domain; TIGRFAM: putative RNA-binding protein, YhbY family YP_007315974.1 PFAM: GTPase of unknown function; Domain of unknown function (DUF1967); GTP1/OBG; TIGRFAM: Obg family GTPase CgtA; Obg family GTPase CgtA, C-terminal extension; small GTP-binding protein domain YP_007315975.1 PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27 YP_007315976.1 PFAM: Protein of unknown function (DUF464) YP_007315977.1 PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21 YP_007315978.1 PFAM: Ribonuclease E/G family; TRAM domain; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family; manually curated; non-canonical start codon YP_007315979.1 PFAM: Peptidase family M50 YP_007315980.1 PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA YP_007315981.1 PFAM: Septum formation topological specificity factor MinE; TIGRFAM: cell division topological specificity factor MinE YP_007315982.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: septum site-determining protein MinD YP_007315983.1 PFAM: Septum formation inhibitor MinC, C-terminal domain; TIGRFAM: septum site-determining protein MinC YP_007315984.1 PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2 YP_007315985.1 PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD YP_007315986.1 PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC YP_007315987.1 PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family YP_007315988.1 PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc YP_007315989.1 PFAM: Maf-like protein; TIGRFAM: MAF protein YP_007315990.1 PFAM: Heptaprenyl diphosphate synthase component I YP_007315991.1 PFAM: FMN-binding domain YP_007315992.1 PFAM: Polyprenyl synthetase YP_007315993.1 PFAM: ApbE family YP_007315994.1 PFAM: Transposase DDE domain YP_007315995.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; DoxX YP_007315996.1 PFAM: Uncharacterised protein family (UPF0180) YP_007315997.1 PFAM: Domain of unknown function DUF302 YP_007315998.1 PFAM: Putative Fe-S cluster; 4Fe-4S binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit YP_007315999.1 PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit YP_007316000.1 PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit YP_007316001.1 PFAM: FMN-binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, G subunit YP_007316002.1 PFAM: NQR2, RnfD, RnfE family; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit YP_007316003.1 PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit YP_007316004.1 PFAM: PHP domain YP_007316005.1 PFAM: DRTGG domain YP_007316006.1 PFAM: Iron only hydrogenase large subunit, C-terminal domain; Putative Fe-S cluster; 4Fe-4S binding domain YP_007316007.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_007316008.1 PFAM: DRTGG domain YP_007316009.1 PFAM: Sporulation related domain YP_007316010.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase YP_007316011.1 PFAM: NADPH-dependent FMN reductase YP_007316013.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase YP_007316014.1 PFAM: CAAX amino terminal protease family YP_007316015.1 PFAM: UbiA prenyltransferase family; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_007316016.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC/EngB; small GTP-binding protein domain YP_007316017.1 PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La YP_007316018.1 PFAM: ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease LonB; lon-related putative ATP-dependent protease YP_007316019.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX) YP_007316020.1 PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP YP_007316021.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Bacterial trigger factor protein (TF); Bacterial trigger factor protein (TF) C-terminus; TIGRFAM: trigger factor YP_007316022.1 TIGRFAM: phosphoesterase, MJ0936 family YP_007316023.1 PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family YP_007316024.1 PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH YP_007316025.1 PFAM: Fumarase C-terminus; TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region YP_007316026.1 PFAM: Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region YP_007316027.1 PFAM: Poly A polymerase head domain YP_007316028.1 PFAM: Ferric uptake regulator family YP_007316030.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_007316031.1 PFAM: PTS system fructose IIA component; TIGRFAM: dihydroxyacetone kinase, phosphotransfer subunit YP_007316032.1 PFAM: Protein of unknown function (DUF1667) YP_007316033.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase YP_007316034.1 PFAM: BFD-like [2Fe-2S] binding domain; FAD dependent oxidoreductase YP_007316035.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase YP_007316036.1 PFAM: Major intrinsic protein; TIGRFAM: MIP family channel proteins YP_007316037.1 PFAM: Glycerol-3-phosphate responsive antiterminator YP_007316038.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: choline ABC transporter, permease protein YP_007316039.1 PFAM: Substrate binding domain of ABC-type glycine betaine transport system; TIGRFAM: choline ABC transporter, periplasmic binding protein YP_007316040.1 PFAM: ABC transporter; CBS domain; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit YP_007316042.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-K factor YP_007316044.1 PFAM: Phosphoribulokinase / Uridine kinase family; TIGRFAM: uridine kinase YP_007316045.1 PFAM: Peptidase family U32 YP_007316046.1 PFAM: O-methyltransferase YP_007316047.1 PFAM: YceG-like family; TIGRFAM: conserved hypothetical protein, YceG family YP_007316049.1 PFAM: Protein of unknown function (DUF1292) YP_007316050.1 PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: RNAse H-fold protein YqgF YP_007316052.1 PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA YP_007316054.1 PFAM: Bacterial protein of unknown function (DUF965) YP_007316055.1 PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase YP_007316056.1 PFAM: Domain of unknown function DUF20 YP_007316057.1 PFAM: Sporulation protein YunB (Spo_YunB); TIGRFAM: sporulation protein YunB YP_007316058.1 PFAM: S4 domain; tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase YP_007316059.1 PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family YP_007316060.1 PFAM: MutS domain V; Smr domain; MutS domain III; TIGRFAM: MutS2 family protein YP_007316061.1 PFAM: NIF3 (NGG1p interacting factor 3) YP_007316063.1 PFAM: Colicin V production protein YP_007316064.1 PFAM: Cell division protein ZapA YP_007316065.1 PFAM: tRNA synthetases class II core domain (F); tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial YP_007316066.1 PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit YP_007316067.1 PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3 YP_007316068.1 PFAM: TrkA-N domain; TrkA-C domain YP_007316069.1 PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family YP_007316070.1 PFAM: TrkA-N domain; TrkA-C domain YP_007316071.1 PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family YP_007316072.1 PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20 YP_007316073.1 PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35 YP_007316074.1 PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3; manually curated; non-canonical start codon YP_007316075.1 PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TGS domain; TIGRFAM: threonyl-tRNA synthetase YP_007316076.1 PFAM: YtxC-like family; TIGRFAM: putative sporulation protein YtxC YP_007316077.1 TIGRFAM: conserved hypothetical protein (putative transposase or invertase) YP_007316078.1 TIGRFAM: conserved hypothetical protein (putative transposase or invertase) YP_007316080.1 PFAM: SmpB protein; TIGRFAM: SsrA-binding protein YP_007316081.1 PFAM: Ribonuclease B OB domain; RNB domain; S1 RNA binding domain; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonucleases YP_007316082.1 PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit YP_007316083.1 PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase YP_007316084.1 PFAM: Metalloenzyme superfamily; BPG-independent PGAM N-terminus (iPGM_N); TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase YP_007316085.1 PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase YP_007316086.1 PFAM: Phosphoglycerate kinase YP_007316087.1 PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I YP_007316088.1 PFAM: Ribonuclease R winged-helix domain; Putative sugar-binding domain YP_007316089.1 PFAM: Sporulation Regulator WhiA N terminal; Sporulation Regulator WhiA C terminal domain; TIGRFAM: conserved hypothetical protein YP_007316090.1 PFAM: Uncharacterised protein family UPF0052; TIGRFAM: conserved hypothetical protein, cofD-related YP_007316091.1 PFAM: P-loop ATPase protein family YP_007316092.1 PFAM: PHP domain YP_007316093.1 PFAM: PHP domain YP_007316096.1 PFAM: Carbohydrate binding domain (family 25) YP_007316097.1 PFAM: Domain of unknown function (DUF2223) YP_007316098.1 PFAM: Alpha amylase, catalytic domain YP_007316099.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family YP_007316100.1 PFAM: HutP YP_007316101.1 PFAM: HPr Serine kinase N terminus; HPr Serine kinase C-terminal domain; TIGRFAM: Hpr(Ser) kinase/phosphatase YP_007316102.1 PFAM: PTS system, Lactose/Cellobiose specific IIA subunit YP_007316103.1 PFAM: ROK family; TIGRFAM: ROK family protein (putative glucokinase) YP_007316105.1 PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain YP_007316106.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB YP_007316107.1 PFAM: Positive regulator of sigma(E), RseC/MucC YP_007316108.1 PFAM: Uncharacterised BCR, COG1937 YP_007316109.1 PFAM: Heavy-metal-associated domain YP_007316111.1 PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit YP_007316112.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box YP_007316113.1 PFAM: Helix-turn-helix; Bacterial transcriptional regulator; manually curated; non-canonical start codon YP_007316114.1 PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit YP_007316117.1 PFAM: Competence protein YP_007316118.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase YP_007316119.1 PFAM: NADPH-dependent FMN reductase YP_007316120.1 PFAM: HTH domain; Mga helix-turn-helix domain; PRD domain; PTS system, Lactose/Cellobiose specific IIB subunit; Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YP_007316121.1 PFAM: PTS system sugar-specific permease component YP_007316122.1 PFAM: PTS system, Lactose/Cellobiose specific IIB subunit YP_007316123.1 PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YP_007316124.1 manually curated; non-canonical start codon YP_007316125.1 PFAM: Predicted membrane protein (DUF2078) YP_007316126.1 PFAM: Protein of unknown function (DUF1703); Predicted AAA-ATPase YP_007316129.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_007316130.1 PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase family protein YP_007316133.1 PFAM: Phosphoadenosine phosphosulfate reductase family YP_007316135.1 TIGRFAM: DNA sulfur modification protein DndD YP_007316137.1 PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; TIGRFAM: DNA phosphorothioation system restriction enzyme YP_007316138.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2128) YP_007316139.1 PFAM: Protein of unknown function (DUF3006) YP_007316141.1 PFAM: Predicted Peptidoglycan domain; Predicted lysozyme (DUF847) YP_007316142.1 PFAM: Holin family; TIGRFAM: toxin secretion/phage lysis holin YP_007316146.1 PFAM: Spo0E like sporulation regulatory protein YP_007316147.1 PFAM: IstB-like ATP binding protein; manually curated; non-canonical start codon YP_007316149.1 TIGRFAM: DNA binding domain, excisionase family YP_007316151.1 PFAM: Helix-turn-helix YP_007316152.1 PFAM: Domain of unknown function (DUF955) YP_007316153.1 PFAM: Phage integrase family YP_007316154.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; Elongation factor SelB, winged helix; TIGRFAM: selenocysteine-specific elongation factor SelB; small GTP-binding protein domain YP_007316155.1 PFAM: Selenocysteine synthase N terminal; L-seryl-tRNA selenium transferase; TIGRFAM: seryl-tRNA(sec) selenium transferase YP_007316156.1 PFAM: Bacterial regulatory proteins, tetR family YP_007316157.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_007316158.1 PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase family protein YP_007316160.1 PFAM: Rhodanese-like domain YP_007316161.1 PFAM: SirA-like protein; DsrE/DsrF-like family; TIGRFAM: selenium metabolism protein YedF YP_007316162.1 PFAM: Rhodanese-like domain YP_007316164.1 PFAM: HAMP domain; Cache domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_007316165.1 PFAM: Acetokinase family; TIGRFAM: acetate kinase YP_007316166.1 PFAM: Fatty acid synthesis protein YP_007316167.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YP_007316168.1 PFAM: Thioredoxin YP_007316169.1 PFAM: Thioredoxin; Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase YP_007316170.1 PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport YP_007316171.1 PFAM: Glycine/sarcosine/betaine reductase selenoprotein B (GRDB); TIGRFAM: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family; manually curated YP_007316172.1 PFAM: Glycine/sarcosine/betaine reductase component B subunits YP_007316174.1 PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit YP_007316175.1 PFAM: Divergent polysaccharide deacetylase YP_007316176.1 PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc) YP_007316177.1 PFAM: ATP cone domain; TIGRFAM: intein N-terminal splicing region; intein C-terminal splicing region YP_007316178.1 PFAM: Radical SAM superfamily; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein YP_007316179.1 TIGRFAM: small redox-active disulfide protein 2 YP_007316180.1 PFAM: Predicted permease YP_007316181.1 PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein YP_007316182.1 TIGRFAM: phosphoesterase, MJ0936 family YP_007316183.1 PFAM: Bacterial regulatory protein, arsR family YP_007316185.1 PFAM: Bacterial regulatory proteins, gntR family; UTRA domain; TIGRFAM: trehalose operon repressor, B. subtilis-type YP_007316186.1 PFAM: Alpha amylase, catalytic domain; TIGRFAM: alpha,alpha-phosphotrehalase YP_007316187.1 PFAM: Phosphotransferase system, EIIC; phosphotransferase system, EIIB; TIGRFAM: PTS system, trehalose-specific IIBC component; PTS system, glucose-like IIB component YP_007316188.1 PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain YP_007316189.1 PFAM: DeoC/LacD family aldolase; TIGRFAM: deoxyribose-phosphate aldolase YP_007316190.1 PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain YP_007316191.1 PFAM: Transketolase, thiamine diphosphate binding domain YP_007316192.1 PFAM: Uncharacterized BCR, YitT family COG1284; Uncharacterized protein conserved in bacteria (DUF2179) YP_007316193.1 PFAM: Glycosyl transferase WecB/TagA/CpsF family; TIGRFAM: bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family YP_007316194.1 PFAM: Polysaccharide pyruvyl transferase; TIGRFAM: polysaccharide pyruvyl transferase CsaB YP_007316196.1 PFAM: Protein of unknown function (DUF2993) YP_007316197.1 PFAM: ZIP Zinc transporter YP_007316198.1 PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2; manually curated YP_007316199.1 PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SEC-C motif; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit YP_007316200.1 PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein YP_007316201.1 PFAM: 'Cold-shock' DNA-binding domain YP_007316202.1 PFAM: ABC transporter YP_007316203.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; ectoine/hydroxyectoine ABC transporter, permease protein EhuC YP_007316204.1 PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: lysine-arginine-ornithine-binding periplasmic protein YP_007316206.1 PFAM: FlaG protein YP_007316207.1 PFAM: Formyl transferase YP_007316208.1 PFAM: Domain of unknown function (DUF2172) YP_007316209.1 PFAM: Glycosyltransferase family 28 C-terminal domain; TIGRFAM: pseudaminic acid biosynthesis-associated protein PseG YP_007316210.1 PFAM: Cytidylyltransferase YP_007316211.1 PFAM: SAF domain; NeuB family; TIGRFAM: pseudaminic acid synthase; N-acetylneuraminate synthase YP_007316212.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; HAD superfamily (subfamily IA) hydrolase, TIGR02253 YP_007316213.1 PFAM: ATP-grasp domain YP_007316214.1 PFAM: RmlD substrate binding domain; TIGRFAM: dTDP-4-dehydrorhamnose reductase YP_007316215.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase YP_007316216.1 PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase YP_007316217.1 PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase, short form YP_007316218.1 PFAM: Glycosyl transferase family 2 YP_007316219.1 PFAM: Glycosyl transferase family 2 YP_007316220.1 PFAM: Glycosyl transferase family 2 YP_007316221.1 PFAM: Transposase YP_007316222.1 PFAM: Glycosyl transferase family 2 YP_007316223.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family YP_007316224.1 PFAM: Methyltransferase domain YP_007316225.1 PFAM: ATP-grasp domain YP_007316226.1 PFAM: Methyltransferase domain YP_007316227.1 PFAM: Sulfotransferase domain YP_007316229.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase YP_007316230.1 PFAM: S23 ribosomal protein YP_007316231.1 PFAM: Polysaccharide biosynthesis protein; TIGRFAM: UDP-N-acetylglucosamine 4,6-dehydratase YP_007316232.1 PFAM: FlgN protein YP_007316233.1 PFAM: Flagellar protein FliS; TIGRFAM: flagellar biosynthetic protein FliS YP_007316235.1 PFAM: Protein of unknown function DUF115 YP_007316236.1 PFAM: Flagellar hook-associated protein 2 C-terminus YP_007316237.1 PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region YP_007316238.1 PFAM: Global regulator protein family; TIGRFAM: carbon storage regulator (csrA) YP_007316239.1 PFAM: S23 ribosomal protein YP_007316240.1 PFAM: FliW protein YP_007316242.1 PFAM: Bacterial flagellin N-terminal helical region; Bacterial flagellin C-terminal helical region; TIGRFAM: flagellar hook-associated protein 3 YP_007316243.1 PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar hook-associated protein FlgK YP_007316244.1 PFAM: FlgN protein YP_007316245.1 PFAM: Anti-sigma-28 factor, FlgM; TIGRFAM: flagellar biosynthesis anti-sigma factor FlgM YP_007316246.1 TIGRFAM: flagellar operon protein TIGR03826 YP_007316247.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein YP_007316248.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase YP_007316249.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-H factor YP_007316250.1 PFAM: Domain of unknown function (DUF362) YP_007316252.1 PFAM: Iron only hydrogenase large subunit, C-terminal domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Iron hydrogenase small subunit; TIGRFAM: [FeFe] hydrogenase, group A YP_007316253.1 PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain YP_007316255.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_007316256.1 PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit YP_007316257.1 PFAM: Cytidylyltransferase; TIGRFAM: rfaE bifunctional protein, domain II; cytidyltransferase-related domain YP_007316258.1 PFAM: pfkB family carbohydrate kinase; TIGRFAM: rfaE bifunctional protein, domain I YP_007316259.1 PFAM: Polynucleotide kinase 3 phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family domain YP_007316261.1 PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family YP_007316263.1 PFAM: TRAM domain; tRNA (Uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA YP_007316264.1 PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein YP_007316266.1 PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NAD-dependent, mitochondrial type; isopropylmalate/isohomocitrate dehydrogenases YP_007316267.1 PFAM: Citrate synthase YP_007316268.1 PFAM: GatB/GatE catalytic domain; GatB domain; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit YP_007316269.1 PFAM: Amidase; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit YP_007316270.1 PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit YP_007316271.1 PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD YP_007316272.1 PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; NAD-dependent DNA ligase C4 zinc finger domain; BRCA1 C Terminus (BRCT) domain; TIGRFAM: DNA ligase, NAD-dependent YP_007316273.1 PFAM: TrkA-N domain; TrkA-C domain YP_007316274.1 PFAM: Rubrerythrin YP_007316275.1 PFAM: DHH family; DHHA2 domain YP_007316276.1 PFAM: UvrD/REP helicase; TIGRFAM: ATP-dependent DNA helicase PcrA YP_007316277.1 PFAM: Redoxin YP_007316278.1 PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family YP_007316279.1 PFAM: FAD dependent oxidoreductase YP_007316280.1 PFAM: Predicted membrane protein (DUF2324) YP_007316282.1 PFAM: NLPA lipoprotein; TIGRFAM: lipoprotein, YaeC family YP_007316283.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007316284.1 PFAM: ABC transporter; NIL domain YP_007316285.1 TIGRFAM: uncharacterized protein TIGR03905 YP_007316286.1 PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain YP_007316287.1 PFAM: Phosphotransferase system, EIIC; PTS system, Lactose/Cellobiose specific IIB subunit; TIGRFAM: PTS system, mannitol-specific IIC component YP_007316288.1 PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YP_007316289.1 PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain YP_007316290.1 PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase YP_007316291.1 PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast YP_007316292.1 PFAM: Transaldolase; TIGRFAM: fructose-6-phosphate aldolase, TalC/MipB family YP_007316293.1 PFAM: SIS domain; TIGRFAM: 6-phospho 3-hexuloisomerase YP_007316294.1 PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase YP_007316295.1 PFAM: Periplasmic binding protein YP_007316296.1 PFAM: FecCD transport family YP_007316297.1 PFAM: FecCD transport family YP_007316298.1 PFAM: ABC transporter YP_007316299.1 PFAM: short chain dehydrogenase YP_007316300.1 PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase YP_007316301.1 PFAM: Bacterial regulatory protein, arsR family YP_007316302.1 PFAM: Peptidase family M23 YP_007316303.1 PFAM: Na+/H+ antiporter family YP_007316304.1 TIGRFAM: adenosine phosphosulphate reductase, beta subunit YP_007316305.1 PFAM: domain; FAD binding domain; TIGRFAM: adenosine phosphosulphate reductase, alpha subunit YP_007316306.1 PFAM: ATP-sulfurylase; TIGRFAM: ATP sulphurylase YP_007316307.1 PFAM: Cys/Met metabolism PLP-dependent enzyme YP_007316308.1 PFAM: SirA-like protein; Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain YP_007316309.1 PFAM: Mov34/MPN/PAD-1 family YP_007316310.1 PFAM: MoeZ/MoeB domain; ThiF family YP_007316311.1 PFAM: ThiS family; TIGRFAM: thiamine biosynthesis protein ThiS YP_007316312.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases YP_007316313.1 PFAM: Domain of unknown function (DUF389); TIGRFAM: uncharacterized hydrophobic domain; TIGR00341 family protein YP_007316314.1 PFAM: Trp repressor protein; TIGRFAM: TrpR-related protein YerC/YecD YP_007316315.1 PFAM: Carbohydrate phosphorylase; TIGRFAM: alpha-glucan phosphorylases YP_007316316.1 PFAM: Glutaredoxin YP_007316317.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain YP_007316318.1 PFAM: Hemerythrin HHE cation binding domain; TIGRFAM: hemerythrin-like metal-binding domain YP_007316319.1 PFAM: Predicted domain in sensory proteins (DUF2308) YP_007316320.1 PFAM: Radical SAM superfamily; TIGRFAM: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit; radical SAM domain protein, CofH subfamily YP_007316321.1 PFAM: Radical SAM superfamily; TIGRFAM: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit YP_007316322.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; DsrE/DsrF-like family; SirA-like protein; Rhodanese-like domain; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain YP_007316324.1 PFAM: Cell Wall Hydrolase YP_007316325.1 PFAM: WD40-like Beta Propeller Repeat YP_007316326.1 PFAM: Protein of unknown function, DUF400 YP_007316327.1 PFAM: Protein of unknown function, DUF400 YP_007316328.1 PFAM: Curli production assembly/transport component CsgG YP_007316331.1 PFAM: Tetratricopeptide repeat; Stage II sporulation protein; TIGRFAM: SpoIID/LytB domain YP_007316332.1 PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase YP_007316333.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase YP_007316334.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase YP_007316335.1 PFAM: PHP domain YP_007316336.1 PFAM: Adenylylsulphate kinase; TIGRFAM: adenylylsulfate kinase (apsK) YP_007316337.1 PFAM: Elongation factor Tu GTP binding domain; Adenylylsulphate kinase; TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein domain YP_007316338.1 PFAM: Protein of unknown function DUF86 YP_007316339.1 PFAM: Nucleotidyltransferase domain YP_007316340.1 PFAM: Domain of unknown function (DUF955) YP_007316341.1 PFAM: Helix-turn-helix YP_007316342.1 PFAM: Phosphoadenosine phosphosulfate reductase family YP_007316343.1 PFAM: NAD dependent epimerase/dehydratase family YP_007316344.1 PFAM: RmlD substrate binding domain; TIGRFAM: dTDP-4-dehydrorhamnose reductase YP_007316345.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase YP_007316346.1 PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase YP_007316347.1 PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase, short form YP_007316348.1 PFAM: Glycosyl transferases group 1; TIGRFAM: sugar transferase, PEP-CTERM/EpsH1 system associated YP_007316349.1 PFAM: Glycosyl transferases group 1 YP_007316350.1 PFAM: O-Antigen ligase YP_007316351.1 PFAM: Glycosyl transferases group 1 YP_007316353.1 PFAM: Polysaccharide biosynthesis protein YP_007316354.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase YP_007316355.1 PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_007316356.1 PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase YP_007316357.1 PFAM: Chain length determinant protein YP_007316358.1 PFAM: PAP2 superfamily YP_007316360.1 PFAM: Glycosyl transferases group 1 YP_007316361.1 PFAM: O-Antigen ligase YP_007316363.1 PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family YP_007316364.1 PFAM: Glycosyl transferases group 1 YP_007316365.1 PFAM: Glycosyl transferase family 2 YP_007316366.1 PFAM: Glycosyl transferases group 1 YP_007316367.1 PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase III, putative; lipopolysaccharide heptosyltransferase II YP_007316368.1 PFAM: Glycosyltransferase family 9 (heptosyltransferase); 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); TIGRFAM: lipopolysaccharide heptosyltransferase I; lipopolysaccharide heptosyltransferase II YP_007316369.1 PFAM: OstA-like protein YP_007316374.1 PFAM: S-layer homology domain YP_007316377.1 PFAM: Protein of unknown function (DUF3084) YP_007316378.1 PFAM: Predicted permease YjgP/YjgQ family YP_007316379.1 PFAM: ABC transporter YP_007316380.1 PFAM: OstA-like protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA YP_007316381.1 PFAM: Protein of unknown function (DUF1239) YP_007316382.1 PFAM: Bacterial lipid A biosynthesis acyltransferase YP_007316383.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; HAD-superfamily hydrolase, subfamily IIIA YP_007316384.1 PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein YP_007316385.1 PFAM: DAHP synthetase I family; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase YP_007316386.1 PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase YP_007316387.1 PFAM: Tetraacyldisaccharide-1-P 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase YP_007316388.1 PFAM: Domain of unknown function (DUF374) YP_007316389.1 PFAM: ABC transporter transmembrane region; ABC transporter; TIGRFAM: lipid A export permease/ATP-binding protein MsbA YP_007316390.1 PFAM: Lipid-A-disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase YP_007316391.1 PFAM: Protein of unknown function (DUF1009) YP_007316392.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase YP_007316393.1 PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ YP_007316394.1 PFAM: UDP-3-O-acyl N-acetylglycosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase YP_007316395.1 PFAM: ABC transporter YP_007316397.1 PFAM: OstA-like protein YP_007316398.1 PFAM: Protein of unknown function (DUF1239) YP_007316400.1 PFAM: OstA-like protein YP_007316401.1 PFAM: Predicted permease YjgP/YjgQ family YP_007316402.1 PFAM: Predicted permease YjgP/YjgQ family YP_007316403.1 PFAM: Subtilase family YP_007316404.1 PFAM: L,D-transpeptidase catalytic domain YP_007316406.1 PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_007316407.1 PFAM: Outer membrane protein (OmpH-like); Protein of unknown function (DUF3153) YP_007316409.1 PFAM: Outer membrane protein (OmpH-like) YP_007316410.1 PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein YP_007316411.1 PFAM: Family of unknown function (DUF490) YP_007316412.1 PFAM: SpoIVB peptidase S55 YP_007316413.1 PFAM: Rod binding protein YP_007316414.1 PFAM: Flagellar P-ring protein YP_007316415.1 PFAM: Flagellar L-ring protein YP_007316416.1 TIGRFAM: flagella basal body P-ring formation protein FlgA YP_007316417.1 PFAM: Domain of unknown function (DUF1078); Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body proteins; flagellar basal-body rod protein FlgG, Gram-negative bacteria YP_007316418.1 PFAM: Flagella basal body rod protein; Domain of unknown function (DUF1078); TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body proteins YP_007316419.1 PFAM: Stage III sporulation protein D; TIGRFAM: sporulation transcriptional regulator SpoIIID YP_007316420.1 PFAM: Peptidase family M23 YP_007316421.1 PFAM: Stage II sporulation protein; TIGRFAM: SpoIID/LytB domain; stage II sporulation protein D YP_007316422.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_007316423.1 PFAM: Protein of unknown function (DUF1694) YP_007316424.1 PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; ATP synthase, Delta/Epsilon chain, long alpha-helix domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria) YP_007316425.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta chain, C terminal domain; TIGRFAM: ATP synthase, F1 beta subunit YP_007316426.1 PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit YP_007316427.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit YP_007316428.1 PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit YP_007316429.1 PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b YP_007316430.1 PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c YP_007316431.1 PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c YP_007316432.1 PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) YP_007316433.1 PFAM: ATP synthase I chain YP_007316434.1 PFAM: Putative F0F1-ATPase subunit (ATPase_gene1) YP_007316435.1 PFAM: Glycosyl transferase family 4 YP_007316436.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region YP_007316437.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase YP_007316438.1 PFAM: Serine hydroxymethyltransferase YP_007316439.1 PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerases, RpiB/LacA/LacB family YP_007316440.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase YP_007316441.1 PFAM: Domain of unknown function DUF YP_007316442.1 PFAM: Domain of unknown function DUF YP_007316443.1 PFAM: yrdC domain; SUA5 domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein YP_007316444.1 PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases; protein-(glutamine-N5) methyltransferase, release factor-specific YP_007316445.1 PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1 YP_007316446.1 PFAM: Protein of unknown function (DUF1385) YP_007316447.1 PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31 YP_007316448.1 PFAM: Rho termination factor, N-terminal domain; Rho termination factor, RNA-binding domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: transcription termination factor Rho YP_007316449.1 PFAM: Sodium/calcium exchanger protein YP_007316450.1 PFAM: Bacterial fructose-1,6-bisphosphatase, glpX-encoded; TIGRFAM: fructose-1,6-bisphosphatase, class II YP_007316451.1 PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist YP_007316454.1 PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative YP_007316455.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine ammonia-lyase, biosynthetic, long form; threonine dehydratase, medium form YP_007316456.1 PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase YP_007316457.1 PFAM: Protein of unknown function (DUF1427); TIGRFAM: PEP-CTERM protein sorting domain; XapX domain YP_007316458.1 PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase YP_007316459.1 PFAM: Domain of unknown function (DUF1934) YP_007316460.1 manually curated; non-canonical start codon YP_007316461.1 PFAM: Protein of unknown function (DUF441) YP_007316462.1 PFAM: Amidohydrolase family; TIGRFAM: isoaspartyl dipeptidase IadA YP_007316463.1 PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I YP_007316464.1 PFAM: Amino acid permease YP_007316466.1 PFAM: Protein of unknown function (DUF421) YP_007316467.1 PFAM: Membrane transport protein YP_007316468.1 PFAM: Bacterial regulatory proteins, lacI family; family YP_007316469.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: methylmalonic acid semialdehyde dehydrogenase YP_007316470.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_007316471.1 PFAM: Xylose isomerase-like TIM barrel YP_007316472.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain YP_007316473.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain YP_007316474.1 PFAM: KduI/IolB family YP_007316475.1 PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases YP_007316476.1 PFAM: pfkB family carbohydrate kinase YP_007316477.1 PFAM: Branched-chain amino acid transport system / permease component YP_007316478.1 PFAM: ABC transporter YP_007316479.1 PFAM: family YP_007316480.1 PFAM: Melibiase YP_007316481.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_007316482.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain YP_007316483.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007316484.1 PFAM: Binding-protein-dependent transport system inner membrane component YP_007316485.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle YP_007316486.1 PFAM: Family 4 glycosyl hydrolase; Family 4 glycosyl hydrolase C-terminal domain YP_007316487.1 PFAM: Transposase DDE domain YP_007316488.1 PFAM: AraC-like ligand binding domain YP_007316489.1 PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase YP_007316490.1 PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase YP_007316491.1 PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YP_007316492.1 PFAM: Domain of unknown function (DUF386); TIGRFAM: uncharacterized protein, YhcH/YjgK/YiaL family YP_007316493.1 PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase YP_007316494.1 PFAM: pfkB family carbohydrate kinase YP_007316495.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_007316496.1 PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit YP_007316497.1 PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component YP_007316498.1 PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family YP_007316499.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator YP_007316500.1 PFAM: Family 4 glycosyl hydrolase; Family 4 glycosyl hydrolase C-terminal domain YP_007316501.1 PFAM: PTS system, Lactose/Cellobiose specific IIA subunit YP_007316502.1 PFAM: Phosphotransferase system, EIIC; TIGRFAM: phosphotransferase system, cellobiose specific, IIC component; PTS system, lactose/cellobiose family IIC component YP_007316503.1 PFAM: PTS system, Lactose/Cellobiose specific IIB subunit YP_007316504.1 PFAM: PTS system fructose IIA component; Sugar-specific transcriptional regulator TrmB; Sigma-54 interaction domain; PRD domain YP_007316505.1 PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54 factor, core binding domain; Sigma-54, DNA binding domain; TIGRFAM: RNA polymerase sigma-54 factor YP_007316506.1 PFAM: PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase YP_007316507.1 PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family YP_007316508.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; PTS HPr component phosphorylation site; PAS fold; TIGRFAM: PAS domain S-box YP_007316509.1 PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain; manually curated; non-canonical start codon YP_007316510.1 PFAM: NAD synthase; TIGRFAM: NAD+ synthetase YP_007316512.1 PFAM: Phosphotransferase system, EIIC; PTS system, Lactose/Cellobiose specific IIB subunit; TIGRFAM: PTS system, fructose-specific, IIB component; PTS system, fructose subfamily, IIC component YP_007316513.1 PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; TIGRFAM: PTS system, fructose subfamily, IIA component YP_007316514.1 PFAM: pfkB family carbohydrate kinase; TIGRFAM: 1-phosphofructokinase; hexose kinase, 1-phosphofructokinase family YP_007316515.1 PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain YP_007316516.1 PFAM: Domain of Unknown Function (DUF1540) YP_007316517.1 PFAM: Spore coat associated protein JA (CotJA) YP_007316519.1 PFAM: Manganese containing catalase YP_007316520.1 PFAM: PAP2 superfamily YP_007316521.1 PFAM: NlpC/P60 family YP_007316522.1 PFAM: Stage II sporulation protein R (spore_II_R); TIGRFAM: stage II sporulation protein R YP_007316523.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-G factor; RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, sigma-B/F/G subfamily YP_007316524.1 PFAM: Spore germination protein; TIGRFAM: spore germination protein (amino acid permease) YP_007316526.1 PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family YP_007316527.1 PFAM: Bacillus/Clostridium GerA spore germination protein YP_007316528.1 PFAM: Spore germination protein; TIGRFAM: spore germination protein (amino acid permease) YP_007316529.1 PFAM: ABC-2 type transporter YP_007316530.1 PFAM: ABC transporter YP_007316531.1 PFAM: 'Cold-shock' DNA-binding domain YP_007316532.1 TIGRFAM: TIGR02688 family protein; conserved hypothetical protein YP_007316533.1 PFAM: Predicted SPOUT methyltransferase; TIGRFAM: rRNA large subunit m3Psi methyltransferase RlmH YP_007316534.1 PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF) YP_007316535.1 PFAM: Metallo-beta-lactamase superfamily YP_007316536.1 PFAM: CheR methyltransferase, SAM binding domain; CheR methyltransferase, all-alpha domain YP_007316537.1 PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX; manually curated; non-canonical start codon YP_007316538.1 PFAM: CoA binding domain; Putative DNA-binding protein N-terminus YP_007316539.1 PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase YP_007316540.1 PFAM: Peptidase family S58 YP_007316541.1 PFAM: Thymidine kinase YP_007316542.1 PFAM: HD domain; GGDEF domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain YP_007316543.1 PFAM: Patatin-like phospholipase YP_007316545.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase, clade II YP_007316546.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain YP_007316547.1 PFAM: Flavodoxin-like fold YP_007316548.1 PFAM: HxlR-like helix-turn-helix YP_007316549.1 PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_007316550.1 PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent YP_007316551.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase YP_007316552.1 PFAM: Phosphoribosyl transferase domain; Glutamine amidotransferases class-II; TIGRFAM: amidophosphoribosyltransferase YP_007316553.1 PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase YP_007316554.1 PFAM: Lyase; Adenylosuccinate lyase C-terminal; Adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase YP_007316555.1 PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein YP_007316556.1 PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurK protein YP_007316557.1 PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase YP_007316559.1 PFAM: Radical SAM superfamily; TIGRFAM: pyruvate formate-lyase 1-activating enzyme; glycyl-radical enzyme activating protein family YP_007316560.1 PFAM: Glycine radical; Pyruvate formate lyase; TIGRFAM: formate acetyltransferase 1 YP_007316561.1 PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase YP_007316562.1 PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase YP_007316564.1 PFAM: Accessory gene regulator B YP_007316565.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase YP_007316566.1 PFAM: Transposase DDE domain YP_007316569.1 PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase YP_007316570.1 PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9 YP_007316571.1 PFAM: Predicted membrane protein (DUF2232) YP_007316573.1 PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18 YP_007316574.1 PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb) YP_007316575.1 PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6 YP_007316576.1 PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF YP_007316577.1 PFAM: Bacterial protein of unknown function (DUF951) YP_007316578.1 PFAM: Mechanosensitive ion channel YP_007316579.1 PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase YP_007316581.1 PFAM: Protein of unknown function (DUF1256); TIGRFAM: putative sporulation protein YyaC YP_007316582.1 PFAM: Acetyltransferase (GNAT) family YP_007316583.1 PFAM: Protein of unknown function, DUF583 YP_007316585.1 PFAM: Protein of unknown function (DUF554) YP_007316586.1 PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase family protein YP_007316587.1 PFAM: GTPase of unknown function; TIGRFAM: [FeFe] hydrogenase H-cluster maturation GTPase HydF; small GTP-binding protein domain YP_007316588.1 PFAM: Radical SAM superfamily; Protein of unknown function (DUF3343); TIGRFAM: [FeFe] hydrogenase H-cluster radical SAM maturase HydE YP_007316590.1 PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: [FeFe] hydrogenase H-cluster radical SAM maturase HydG; thiazole biosynthesis protein ThiH YP_007316592.1 PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA (guanine(527)-N(7))-methyltransferase GidB YP_007316593.1 PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A YP_007316594.1 PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A YP_007316595.1 PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: small GTP-binding protein domain; tRNA modification GTPase TrmE YP_007316596.1 PFAM: R3H domain YP_007316597.1 PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain YP_007316598.1 PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein YidD YP_007316599.1 PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial; IMG reference gene:2509723939_SP