-- dump date 20140619_083027 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 595495000001 SEQ_END SEQ_END NC_016902.1 4920168 4920168 DR NC_016902.1; contig end 4920168..4920168 Escherichia coli KO11FL 595495000002 SEQ_END SEQ_END NC_016903.1 5360 5360 DR NC_016903.1; contig end 5360..5360 Escherichia coli KO11FL 595495000003 SEQ_END SEQ_END NC_016904.1 103795 103795 DR NC_016904.1; contig end 103795..103795 Escherichia coli KO11FL YP_005275730.1 CDS EKO11_0001 NC_016902.1 46 1449 D TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; KEGG: ssn:SSON_3652 chromosomal replication initiation protein; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase; chromosomal replication initiator protein DnaA 46..1449 Escherichia coli KO11FL 11779160 YP_005275731.1 CDS EKO11_0002 NC_016902.1 1454 2554 D SMART: DNA polymerase III beta chain; TIGRFAM: DNA polymerase III, beta subunit; KEGG: sdy:SDY_4183 DNA polymerase III subunit beta; PFAM: DNA polymerase III beta chain; DNA polymerase III subunit beta 1454..2554 Escherichia coli KO11FL 11779162 YP_005275732.1 CDS EKO11_0003 NC_016902.1 2554 3627 D KEGG: ssn:SSON_3650 recombination protein F; TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; DNA replication and repair protein RecF 2554..3627 Escherichia coli KO11FL 11779818 YP_005275733.1 CDS EKO11_0004 NC_016902.1 3656 6070 D SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA gyrase, B subunit; KEGG: ssn:SSON_3649 DNA gyrase subunit B; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain-containing protein; DNA gyrase subunit B domain protein; DNA gyrase subunit B 3656..6070 Escherichia coli KO11FL 11779165 YP_005275734.1 CDS EKO11_0005 NC_016902.1 6310 6708 D PFAM: protein of unknown function DUF937; KEGG: ssn:SSON_3648 hypothetical protein; hypothetical protein 6310..6708 Escherichia coli KO11FL 11779195 YP_005275735.1 CDS EKO11_0006 NC_016902.1 6823 7635 D KEGG: ssn:SSON_3647 sugar phosphatase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; cof family hydrolase 6823..7635 Escherichia coli KO11FL 11779197 YP_005275736.1 CDS EKO11_0007 NC_016902.1 7681 8337 R KEGG: sfl:SF3768 hypothetical protein; hypothetical protein complement(7681..8337) Escherichia coli KO11FL 11779199 YP_005275737.1 CDS EKO11_0008 NC_016902.1 8615 9304 D KEGG: sfx:S4002 regulator protein for dgo operon; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 8615..9304 Escherichia coli KO11FL 11779201 YP_005275738.1 CDS EKO11_0009 NC_016902.1 9301 10179 D KEGG: eoi:ECO111_4521 2-oxo-3-deoxygalactonate kinase; PFAM: 2-keto-3-deoxy-galactonokinase; 2-dehydro-3-deoxygalactonokinase 9301..10179 Escherichia coli KO11FL 11779203 YP_005275739.1 CDS EKO11_0010 NC_016902.1 10163 10780 D PFAM: KDPG and KHG aldolase; KEGG: eoh:ECO103_4465 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; KDPG and KHG aldolase 10163..10780 Escherichia coli KO11FL 11779249 YP_005275740.1 CDS EKO11_0011 NC_016902.1 10777 11925 D PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ebd:ECBD_0011 galactonate dehydratase; mandelate racemase/muconate lactonizing protein 10777..11925 Escherichia coli KO11FL 11779250 YP_005275741.1 CDS EKO11_0012 NC_016902.1 12045 13337 D KEGG: ssn:SSON_3642 D-galactonate transport; TIGRFAM: d-galactonate transporter; phosphoglycerate transporter; PFAM: major facilitator superfamily MFS_1; d-galactonate transporter 12045..13337 Escherichia coli KO11FL 11775071 YP_005275742.1 CDS EKO11_0013 NC_016902.1 13334 14398 R PFAM: monooxygenase FAD-binding; KEGG: ebd:ECBD_0013 putative oxidoreductase; monooxygenase FAD-binding protein complement(13334..14398) Escherichia coli KO11FL 11775072 YP_005275743.1 CDS EKO11_0014 NC_016902.1 14499 15713 D KEGG: ebd:ECBD_0014 hypothetical protein; hypothetical protein 14499..15713 Escherichia coli KO11FL 11775073 YP_005275744.1 CDS EKO11_0015 NC_016902.1 15715 16047 R PFAM: protein of unknown function DUF1375; KEGG: sbc:SbBS512_E4231 hypothetical protein; hypothetical protein complement(15715..16047) Escherichia coli KO11FL 11775074 YP_005275745.1 CDS EKO11_0016 NC_016902.1 16353 16766 D PFAM: heat shock protein Hsp20; KEGG: sdy:SDY_4173 heat shock protein IbpA; heat shock protein Hsp20 16353..16766 Escherichia coli KO11FL 11775075 YP_005275746.1 CDS EKO11_0017 NC_016902.1 16878 17306 D PFAM: heat shock protein Hsp20; KEGG: sdy:SDY_4172 heat shock chaperone IbpB; heat shock protein Hsp20 16878..17306 Escherichia coli KO11FL 11775076 YP_005275747.1 CDS EKO11_0018 NC_016902.1 17503 19164 D KEGG: sfx:S3992 hypothetical protein; TIGRFAM: YidE/YbjL duplication; PFAM: YidE/YbjL duplication domain-containing protein; TrkA-C domain protein; YidE/YbjL duplication 17503..19164 Escherichia coli KO11FL 11775077 YP_005275748.1 CDS EKO11_0019 NC_016902.1 19161 19877 R KEGG: sdy:SDY_4170 putative transcriptional regulator; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator complement(19161..19877) Escherichia coli KO11FL 11775078 YP_005275749.1 CDS EKO11_0020 NC_016902.1 20173 21789 D TIGRFAM: PTS system, alpha-glucoside-specific IIBC subunit; PTS system, maltose and glucose-specific subfamily, IIC subunit; PTS system, glucose-like IIB subunint; KEGG: eoh:ECO103_4475 PTS system arbutin-like IIC component; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; PTS system alpha-glucoside-specific transporter subunit IIBC 20173..21789 Escherichia coli KO11FL 11779251 YP_005275750.1 CDS EKO11_0022 NC_016902.1 22600 23493 R KEGG: ebd:ECBD_0022 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(22600..23493) Escherichia coli KO11FL 11775080 YP_005275751.1 CDS EKO11_0023 NC_016902.1 23660 25375 D KEGG: eoi:ECO111_4504 putative symporter YidK; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; SSS sodium solute transporter superfamily protein 23660..25375 Escherichia coli KO11FL 11775081 YP_005275752.1 CDS EKO11_0024 NC_016902.1 25372 26865 D PFAM: sulfatase; KEGG: eoh:ECO103_4479 putative sulfatase/phosphatase; sulfatase 25372..26865 Escherichia coli KO11FL 11775082 YP_005275753.1 CDS EKO11_0025 NC_016902.1 26912 27361 R KEGG: eoi:ECO111_4502 putative inner membrane protein; putative inner membrane protein complement(26912..27361) Escherichia coli KO11FL 11779252 YP_005275754.1 CDS EKO11_0026 NC_016902.1 27471 27818 D PFAM: protein of unknown function DUF202; KEGG: sdy:SDY_4160 hypothetical protein; hypothetical protein 27471..27818 Escherichia coli KO11FL 11775083 YP_005275755.1 CDS EKO11_0027 NC_016902.1 27808 28170 D KEGG: sbc:SbBS512_E4243 hypothetical protein; hypothetical protein 27808..28170 Escherichia coli KO11FL 11775084 YP_005275756.1 CDS EKO11_0028 NC_016902.1 28167 28664 D KEGG: sfv:SFV_3836 putative transcriptional regulator; putative transcriptional regulator 28167..28664 Escherichia coli KO11FL 11775085 YP_005275757.1 CDS EKO11_0029 NC_016902.1 28672 29856 R KEGG: sfv:SFV_3837 multidrug resistance protein D; TIGRFAM: multidrug/H+ antiporter, major facilitator superfamily (MFS); PFAM: major facilitator superfamily MFS_1; multidrug/H+ antiporter complement(28672..29856) Escherichia coli KO11FL 11775086 YP_005275758.1 CDS EKO11_0030 NC_016902.1 30149 30400 D KEGG: sbc:SbBS512_E4246 hypothetical protein; hypothetical protein 30149..30400 Escherichia coli KO11FL 11775087 YP_005275759.1 CDS EKO11_0031 NC_016902.1 30652 30942 R manually curated; KEGG: ebd:ECBD_0031 hypothetical protein; hypothetical protein complement(30652..30942) Escherichia coli KO11FL 11775088 YP_005275760.1 CDS EKO11_0032 NC_016902.1 31133 32821 D KEGG: sbc:SbBS512_E4248 acetolactate synthase catalytic subunit; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; acetolactate synthase large subunit 31133..32821 Escherichia coli KO11FL 11775089 YP_005275761.1 CDS EKO11_0033 NC_016902.1 32825 33115 D KEGG: ssn:SSON_3624 acetolactate synthase 1 regulatory subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; acetolactate synthase small subunit 32825..33115 Escherichia coli KO11FL 11775090 YP_005275762.1 CDS EKO11_0034 NC_016902.1 33190 33780 D KEGG: sbc:SbBS512_E4250 DNA-binding transcriptional activator UhpA; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; two component transcriptional regulator, LuxR family 33190..33780 Escherichia coli KO11FL 11775091 YP_005275763.1 CDS EKO11_0035 NC_016902.1 33780 35282 D KEGG: sbo:SBO_3701 sensory histidine kinase UhpB; PFAM: MASE1 domain protein; histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; integral membrane sensor signal transduction histidine kinase 33780..35282 Escherichia coli KO11FL 11775092 YP_005275764.1 CDS EKO11_0036 NC_016902.1 35292 36611 D KEGG: eoh:ECO103_4490 regulatory protein UhpC; TIGRFAM: phosphoglycerate transporter; PFAM: major facilitator superfamily MFS_1; phosphoglycerate transporter 35292..36611 Escherichia coli KO11FL 11775093 YP_005275765.1 CDS EKO11_0037 NC_016902.1 36749 38140 D KEGG: sbo:SBO_3703 sugar phosphate antiporter; TIGRFAM: phosphoglycerate transporter; PFAM: major facilitator superfamily MFS_1; phosphoglycerate transporter 36749..38140 Escherichia coli KO11FL 11775094 YP_005275766.1 CDS EKO11_0038 NC_016902.1 38185 39951 R TIGRFAM: adenine deaminase; KEGG: eoj:ECO26_4918 cryptic adenine deaminase; PFAM: amidohydrolase; adenine deaminase complement(38185..39951) Escherichia coli KO11FL 11775095 YP_005275767.1 CDS EKO11_0039 NC_016902.1 40114 41460 D PFAM: Xanthine/uracil/vitamin C permease; KEGG: sfx:S3971 hypothetical protein; xanthine/uracil/vitamin C permease 40114..41460 Escherichia coli KO11FL 11775096 YP_005275768.1 CDS EKO11_0040 NC_016902.1 41513 41965 D PFAM: protein of unknown function DUF1198; KEGG: ebd:ECBD_0040 protein of unknown function DUF1198; hypothetical protein 41513..41965 Escherichia coli KO11FL 11779253 YP_005275769.1 CDS EKO11_0041 NC_016902.1 42011 43366 D KEGG: ebr:ECB_03546 ribonucleoside transporter; manually curated; PFAM: major facilitator superfamily MFS_1; major facilitator superfamily protein 42011..43366 Escherichia coli KO11FL 11775097 YP_005275770.1 CDS EKO11_0042 NC_016902.1 43407 43700 R KEGG: sbo:SBO_3710 putative transport protein; putative transport protein complement(43407..43700) Escherichia coli KO11FL 11775098 YP_005275771.1 CDS EKO11_0043 NC_016902.1 43922 44740 D KEGG: eoh:ECO103_4497 cytoplasmic membrane lipoprotein-28; TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; lipoprotein 43922..44740 Escherichia coli KO11FL 11775099 YP_005275772.1 CDS EKO11_0044 NC_016902.1 44744 45667 R KEGG: ebd:ECBD_0045 carboxylate/amino acid/amine transporter; TIGRFAM: carboxylate/amino acid/amine transporter; PFAM: protein of unknown function DUF6 transmembrane; carboxylate/amino acid/amine transporter complement(44744..45667) Escherichia coli KO11FL 11775100 YP_005275773.1 CDS EKO11_0045 NC_016902.1 45778 46962 R KEGG: ebd:ECBD_0046 sugar efflux transporter; TIGRFAM: sugar efflux transporter; PFAM: major facilitator superfamily MFS_1; sugar efflux transporter complement(45778..46962) Escherichia coli KO11FL 11779254 YP_005275774.1 CDS EKO11_0046 NC_016902.1 47344 47490 R KEGG: ebd:ECBD_0047 hypothetical protein; hypothetical protein complement(47344..47490) Escherichia coli KO11FL 11775101 YP_005275775.1 CDS EKO11_0047 NC_016902.1 47608 47700 R hypothetical protein complement(47608..47700) Escherichia coli KO11FL 11775102 YP_005275776.1 CDS EKO11_0048 NC_016902.1 47729 48049 R PFAM: protein of unknown function DUF1219; KEGG: eay:EAM_3020 hypothetical protein; hypothetical protein complement(47729..48049) Escherichia coli KO11FL 11775103 YP_005275777.1 CDS EKO11_0049 NC_016902.1 48083 48448 R PFAM: YagBYeeUYfjZ family protein; KEGG: eoh:ECO103_5087 hypothetical protein; YagBYeeUYfjZ family protein complement(48083..48448) Escherichia coli KO11FL 11775104 YP_005275778.1 CDS EKO11_0050 NC_016902.1 48480 48701 R PFAM: protein of unknown function DUF987; KEGG: kpe:KPK_4943 hypothetical protein; hypothetical protein complement(48480..48701) Escherichia coli KO11FL 11775105 YP_005275779.1 CDS EKO11_0051 NC_016902.1 48710 49180 R KEGG: pay:PAU_03957 hypothetical protein; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; DNA repair protein RadC complement(48710..49180) Escherichia coli KO11FL 11775106 YP_005275780.1 CDS EKO11_0052 NC_016902.1 49250 50071 R KEGG: pay:PAU_03958 hypothetical protein; hypothetical protein complement(49250..50071) Escherichia coli KO11FL 11775107 YP_005275781.1 CDS EKO11_0053 NC_016902.1 50143 50619 R KEGG: ppr:PBPRA1948 hypothetical protein; hypothetical protein complement(50143..50619) Escherichia coli KO11FL 11775108 YP_005275782.1 CDS EKO11_0054 NC_016902.1 50836 51639 R KEGG: tva:TVAG_072150 megakaryocyte stimulating factor; hypothetical protein complement(50836..51639) Escherichia coli KO11FL 11775109 YP_005275783.1 CDS EKO11_0055 NC_016902.1 51871 52170 D PFAM: transposase IS3/IS911 family protein; KEGG: cro:ROD_49861 IS3 transposase A; transposase IS3/IS911 family protein 51871..52170 Escherichia coli KO11FL 11775110 YP_005275784.1 CDS EKO11_0056 NC_016902.1 52167 53033 D PFAM: Integrase catalytic region; KEGG: cro:ROD_49871 IS3 transposase B; integrase catalytic subunit 52167..53033 Escherichia coli KO11FL 11775111 YP_005275785.1 CDS EKO11_0057 NC_016902.1 53061 53354 R KEGG: vpo:Kpol_461p11 hypothetical protein; hypothetical protein complement(53061..53354) Escherichia coli KO11FL 11775112 YP_005275786.1 CDS EKO11_0058 NC_016902.1 53757 54917 R KEGG: cro:ROD_49761 hypothetical protein; hypothetical protein complement(53757..54917) Escherichia coli KO11FL 11775113 YP_005275787.1 CDS EKO11_0059 NC_016902.1 55286 55489 D PFAM: Prophage CP4-57 regulatory; KEGG: pmr:PMI3478 phage regulatory protein; phage transcriptional regulator, AlpA 55286..55489 Escherichia coli KO11FL 11775114 YP_005275788.1 CDS EKO11_0060 NC_016902.1 55825 56856 D KEGG: alv:Alvin_3272 hypothetical protein; hypothetical protein 55825..56856 Escherichia coli KO11FL 11779255 YP_005275789.1 CDS EKO11_0061 NC_016902.1 57550 57984 D KEGG: sbm:Shew185_3245 hypothetical protein; hypothetical protein 57550..57984 Escherichia coli KO11FL 11775115 YP_005275790.1 CDS EKO11_0062 NC_016902.1 58392 60092 D KEGG: ppg:PputGB1_4153 SMC domain-containing protein; SMC domain-containing protein 58392..60092 Escherichia coli KO11FL 11775116 YP_005275791.1 CDS EKO11_0063 NC_016902.1 60094 61719 D PFAM: UvrD/REP helicase; KEGG: ppg:PputGB1_4154 UvrD/REP helicase; UvrD/REP helicase 60094..61719 Escherichia coli KO11FL 11775117 YP_005275792.1 CDS EKO11_0064 NC_016902.1 61815 63038 R PFAM: integrase family protein; KEGG: plu:plu0125 hypothetical protein; integrase family protein complement(61815..63038) Escherichia coli KO11FL 11775118 YP_005275793.1 CDS EKO11_0065 NC_016902.1 63531 64970 D KEGG: sbc:SbBS512_E4108 putative transporter; manually curated; TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; sugar (Glycoside-Pentoside-Hexuronide) transporter 63531..64970 Escherichia coli KO11FL 11775119 YP_005275794.1 CDS EKO11_0066 NC_016902.1 64980 67298 D PFAM: glycoside hydrolase family 31; KEGG: efe:EFER_3949 alpha-xylosidase YicI; glycoside hydrolase family protein 64980..67298 Escherichia coli KO11FL 11775120 YP_005275795.1 CDS EKO11_0067 NC_016902.1 67350 69059 R PFAM: AsmA family protein; KEGG: ebd:ECBD_0069 AsmA family protein; AsmA family protein complement(67350..69059) Escherichia coli KO11FL 11775121 YP_005275796.1 CDS EKO11_0068 NC_016902.1 69180 70571 R KEGG: ssn:SSON_3751 putative transport protein; TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; uracil-xanthine permease complement(69180..70571) Escherichia coli KO11FL 11775122 YP_005275797.1 CDS EKO11_0069 NC_016902.1 70851 72056 D KEGG: eok:G2583_4390 glutamate transport protein; TIGRFAM: sodium/glutamate symporter; PFAM: sodium/glutamate symporter; sodium/glutamate symporter 70851..72056 Escherichia coli KO11FL 11779257 YP_005275798.1 CDS EKO11_0070 NC_016902.1 72059 72925 D KEGG: ebd:ECBD_0072 hypothetical protein; hypothetical protein 72059..72925 Escherichia coli KO11FL 11775123 YP_005275799.1 CDS EKO11_0071 NC_016902.1 72910 74991 R TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; KEGG: ssn:SSON_3753 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase ; helicase domain protein; ATP-dependent DNA helicase RecG complement(72910..74991) Escherichia coli KO11FL 11775124 YP_005275800.1 CDS EKO11_0072 NC_016902.1 74997 75686 R KEGG: sbo:SBO_3726 tRNA guanosine-2'-O-methyltransferase; PFAM: tRNA/rRNA methyltransferase (SpoU); tRNA guanosine-2'-O-methyltransferase complement(74997..75686) Escherichia coli KO11FL 11775125 YP_005275801.1 CDS EKO11_0073 NC_016902.1 75693 77801 R SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: RelA/SpoT family protein; KEGG: sbc:SbBS512_E4101 bifunctional (p)ppGpp synthetase II/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase; PFAM: RelA/SpoT domain protein; metal-dependent phosphohydrolase HD sub domain; TGS domain-containing protein; (p)ppGpp synthetase I SpoT/RelA complement(75693..77801) Escherichia coli KO11FL 11775126 YP_005275802.1 CDS EKO11_0074 NC_016902.1 77820 78095 R KEGG: cko:CKO_05106 DNA-directed RNA polymerase subunit omega; TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; DNA-directed RNA polymerase subunit omega complement(77820..78095) Escherichia coli KO11FL 11775127 YP_005275803.1 CDS EKO11_0075 NC_016902.1 78150 78773 R SMART: guanylate kinase/L-type calcium channel region; TIGRFAM: guanylate kinase; KEGG: sbc:SbBS512_E4099 guanylate kinase; PFAM: guanylate kinase; guanylate kinase complement(78150..78773) Escherichia coli KO11FL 11775128 YP_005275804.1 CDS EKO11_0076 NC_016902.1 79031 80713 D PFAM: NAD-dependent DNA ligase adenylation; NAD-dependent DNA ligase OB-fold; KEGG: eoi:ECO111_4469 NAD-dependent DNA ligase LigB; SMART: NAD-dependent DNA ligase; DNA ligase (NAD(+)) 79031..80713 Escherichia coli KO11FL 11775129 YP_005275805.1 CDS EKO11_0077 NC_016902.1 80710 81327 R PFAM: Uncharacterised protein family UPF0126; KEGG: sdy:SDY_4077 hypothetical protein; hypothetical protein complement(80710..81327) Escherichia coli KO11FL 11775130 YP_005275806.1 CDS EKO11_0078 NC_016902.1 81619 82443 R KEGG: eoi:ECO111_4467 DNA-damage-inducible protein D; DNA-damage-inducible protein D complement(81619..82443) Escherichia coli KO11FL 11775131 YP_005275807.1 CDS EKO11_0079 NC_016902.1 82664 83527 R PFAM: YicC-like domain-containing protein; domain of unknown function DUF1732; KEGG: ssn:SSON_3762 hypothetical protein; YicC-like domain-containing protein complement(82664..83527) Escherichia coli KO11FL 11779258 YP_005275808.1 CDS EKO11_0080 NC_016902.1 83654 84370 D TIGRFAM: ribonuclease PH; KEGG: sbc:SbBS512_E4068 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; ribonuclease PH 83654..84370 Escherichia coli KO11FL 11775132 YP_005275809.1 CDS EKO11_0081 NC_016902.1 84436 85077 D TIGRFAM: orotate phosphoribosyltransferase; KEGG: sbc:SbBS512_E4067 orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; orotate phosphoribosyltransferase 84436..85077 Escherichia coli KO11FL 11775133 YP_005275810.1 CDS EKO11_0082 NC_016902.1 85114 85710 R PFAM: regulatory protein TetR; KEGG: sdy:SDY_4071 nucleoid occlusion protein; regulatory protein TetR complement(85114..85710) Escherichia coli KO11FL 11775134 YP_005275811.1 CDS EKO11_0083 NC_016902.1 85817 86275 R TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; KEGG: ebd:ECBD_0086 deoxyuridine 5'-triphosphate nucleotidohydrolase; PFAM: deoxyUTP pyrophosphatase; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut complement(85817..86275) Escherichia coli KO11FL 11775135 YP_005275812.1 CDS EKO11_0084 NC_016902.1 86253 87473 R TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; KEGG: sfx:S4090 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase complement(86253..87473) Escherichia coli KO11FL 11779259 YP_005275813.1 CDS EKO11_0085 NC_016902.1 87645 88313 D KEGG: sfx:S4091 DNA repair protein RadC; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; DNA repair protein RadC 87645..88313 Escherichia coli KO11FL 11775136 YP_005275814.1 CDS EKO11_0086 NC_016902.1 88530 88766 D KEGG: kpu:KP1_5329 50S ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; 50S ribosomal protein L28 88530..88766 Escherichia coli KO11FL 11775137 YP_005275815.1 CDS EKO11_0087 NC_016902.1 88787 88954 D KEGG: pam:PANA_3902 RpmG; TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; 50S ribosomal protein L33 88787..88954 Escherichia coli KO11FL 11775138 YP_005275816.1 CDS EKO11_0088 NC_016902.1 89052 89861 D TIGRFAM: formamidopyrimidine-DNA glycosylase; KEGG: eoh:ECO103_4547 formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; DNA glycosylase/AP lyase, H2TH DNA-binding; formamidopyrimidine-DNA glycosylase 89052..89861 Escherichia coli KO11FL 11775139 YP_005275817.1 CDS EKO11_0089 NC_016902.1 89900 90379 R TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; KEGG: sbc:SbBS512_E4059 phosphopantetheine adenylyltransferase; PFAM: cytidylyltransferase; pantetheine-phosphate adenylyltransferase complement(89900..90379) Escherichia coli KO11FL 11779260 YP_005275818.1 CDS EKO11_0090 NC_016902.1 90387 91664 R PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; glycosyl transferase group 1; KEGG: ssn:SSON_3774 3-deoxy-D-manno-octulosonic-acid transferase; three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein complement(90387..91664) Escherichia coli KO11FL 11775140 YP_005275819.1 CDS EKO11_0091 NC_016902.1 92077 93135 D KEGG: sdy:SDY_4062 lipopolysaccharide core biosynthesis protein; TIGRFAM: lipopolysaccharide heptosyltransferase III; PFAM: glycosyl transferase family 9; lipopolysaccharide heptosyltransferase III 92077..93135 Escherichia coli KO11FL 11775141 YP_005275820.1 CDS EKO11_0092 NC_016902.1 93132 94256 D PFAM: glycosyl transferase group 1; KEGG: eoh:ECO103_4551 glucosyltransferase I RfaG; group 1 glycosyl transferase 93132..94256 Escherichia coli KO11FL 11775142 YP_005275821.1 CDS EKO11_0093 NC_016902.1 94249 95046 D KEGG: sdy:SDY_4060 putative LPS biosynthesis enzyme; putative LPS biosynthesis enzyme 94249..95046 Escherichia coli KO11FL 11775143 YP_005275822.1 CDS EKO11_0094 NC_016902.1 95062 96078 D KEGG: ebd:ECBD_0097 lipopolysaccharide 3-alpha-galactosyltransferase; PFAM: glycosyl transferase family 8; Glycosyl transferase family 8 domain protein; Lipopolysaccharide 3-alpha-galactosyltransferase 95062..96078 Escherichia coli KO11FL 11775144 YP_005275823.1 CDS EKO11_0095 NC_016902.1 96095 97090 D KEGG: sbc:SbBS512_E4053 lipopolysaccharide 1,2-glucosyltransferase; PFAM: glycosyl transferase family 8; Glycosyl transferase family 8 domain protein; Lipopolysaccharide glucosyltransferase I 96095..97090 Escherichia coli KO11FL 11775145 YP_005275824.1 CDS EKO11_0096 NC_016902.1 97100 97792 D KEGG: sdy:SDY_4057 lipopolysaccharide core biosynthesis protein; lipopolysaccharide core biosynthesis protein 97100..97792 Escherichia coli KO11FL 11775146 YP_005275825.1 CDS EKO11_0097 NC_016902.1 97818 98846 D KEGG: ssn:SSON_3781 UDP-galactose:(galactosyl) LPS alpha1,2-galactosyltransferase; PFAM: glycosyl transferase family 8; Glycosyl transferase family 8 domain protein; Lipopolysaccharide glucosyltransferase I 97818..98846 Escherichia coli KO11FL 11775147 YP_005275826.1 CDS EKO11_0098 NC_016902.1 98928 99911 D PFAM: glycosyl transferase family 2; KEGG: ssn:SSON_3782 putative beta1,3-glucosyltransferase; family 2 glycosyl transferase 98928..99911 Escherichia coli KO11FL 11775148 YP_005275827.1 CDS EKO11_0099 NC_016902.1 99957 101210 D PFAM: O-antigen polymerase; KEGG: sbc:SbBS512_E4049 O-antigen polymerase; O-antigen polymerase 99957..101210 Escherichia coli KO11FL 11775149 YP_005275828.1 CDS EKO11_0100 NC_016902.1 101280 102251 R KEGG: ssn:SSON_3784 ADP-heptose:LPS heptosyl transferase I; TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9; lipopolysaccharide heptosyltransferase I complement(101280..102251) Escherichia coli KO11FL 11775150 YP_005275829.1 CDS EKO11_0101 NC_016902.1 102255 103301 R KEGG: sdy:SDY_4052 ADP-heptose:LPS heptosyltransferase II; TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9; lipopolysaccharide heptosyltransferase II complement(102255..103301) Escherichia coli KO11FL 11775151 YP_005275830.1 CDS EKO11_0102 NC_016902.1 103311 104243 R KEGG: sbc:SbBS512_E4046 ADP-L-glycero-D-mannoheptose-6-epimerase; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; ADP-L-glycero-D-manno-heptose-6-epimerase complement(103311..104243) Escherichia coli KO11FL 11775152 YP_005275831.1 CDS EKO11_0103 NC_016902.1 104457 105653 D TIGRFAM: 2-amino-3-ketobutyrate coenzyme A ligase; KEGG: sfx:S4110 2-amino-3-ketobutyrate coenzyme A ligase; PFAM: aminotransferase class I and II; 2-amino-3-ketobutyrate coenzyme A ligase 104457..105653 Escherichia coli KO11FL 11775153 YP_005275832.1 CDS EKO11_0104 NC_016902.1 105663 106688 D KEGG: sbc:SbBS512_E4044 L-threonine 3-dehydrogenase; TIGRFAM: L-threonine 3-dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; L-threonine 3-dehydrogenase 105663..106688 Escherichia coli KO11FL 11779261 YP_005275833.1 CDS EKO11_0105 NC_016902.1 106927 107961 D PFAM: glycosyl transferase family 2; KEGG: eoh:ECO103_4564 putative glycosyl transferase; family 2 glycosyl transferase 106927..107961 Escherichia coli KO11FL 11775154 YP_005275834.1 CDS EKO11_0106 NC_016902.1 107948 108907 R PFAM: protein of unknown function DUF610 YibQ; KEGG: ebd:ECBD_0111 protein of unknown function DUF610 YibQ; hypothetical protein complement(107948..108907) Escherichia coli KO11FL 11775155 YP_005275835.1 CDS EKO11_0107 NC_016902.1 108911 110170 R PFAM: Peptidase M23; KEGG: eok:G2583_4352 hypothetical protein; peptidase M23 complement(108911..110170) Escherichia coli KO11FL 11775156 YP_005275836.1 CDS EKO11_0108 NC_016902.1 110204 111892 R PFAM: BPG-independent PGAM domain protein; metalloenzyme domain protein; manually curated; KEGG: sbc:SbBS512_E4040 phosphoglyceromutase; TIGRFAM: phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; phosphoglycerate mutase complement(110204..111892) Escherichia coli KO11FL 11775157 YP_005275837.1 CDS EKO11_0109 NC_016902.1 111993 112424 D KEGG: sbc:SbBS512_E4039 rhodanese domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; Rhodanese domain-containing protein 111993..112424 Escherichia coli KO11FL 11775158 YP_005275838.1 CDS EKO11_0110 NC_016902.1 112566 112817 D KEGG: sdy:SDY_4043 glutaredoxin 3; TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin; glutaredoxin 3 112566..112817 Escherichia coli KO11FL 11775159 YP_005275839.1 CDS EKO11_0111 NC_016902.1 112880 113347 D KEGG: sbc:SbBS512_E4037 preprotein translocase subunit SecB; TIGRFAM: protein-export protein SecB; PFAM: protein export chaperone SecB; protein-export protein SecB 112880..113347 Escherichia coli KO11FL 11775160 YP_005275840.1 CDS EKO11_0112 NC_016902.1 113347 114366 D PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: sdy:SDY_4041 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein 113347..114366 Escherichia coli KO11FL 11775161 YP_005275841.1 CDS EKO11_0113 NC_016902.1 114446 115267 D TIGRFAM: serine O-acetyltransferase; KEGG: sdy:SDY_4040 serine acetyltransferase; serine O-acetyltransferase 114446..115267 Escherichia coli KO11FL 11775162 YP_005275842.1 CDS EKO11_0114 NC_016902.1 115320 115793 R KEGG: ebw:BWG_3297 putative tRNA/rRNA methyltransferase YibK; TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU); TrmH family RNA methyltransferase complement(115320..115793) Escherichia coli KO11FL 11775163 YP_005275843.1 CDS EKO11_0115 NC_016902.1 115948 117138 R PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: ssn:SSON_3800 L-lactate dehydrogenase; FMN-dependent alpha-hydroxy acid dehydrogenase complement(115948..117138) Escherichia coli KO11FL 11775164 YP_005275844.1 CDS EKO11_0116 NC_016902.1 117135 117911 R KEGG: sbo:SBO_3609 DNA-binding transcriptional repressor LldR; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator complement(117135..117911) Escherichia coli KO11FL 11775165 YP_005275845.1 CDS EKO11_0117 NC_016902.1 117911 119566 R KEGG: eoh:ECO103_4576 L-lactate permease; TIGRFAM: L-lactate transport; PFAM: L-lactate permease; L-lactate transport complement(117911..119566) Escherichia coli KO11FL 11775166 YP_005275846.1 CDS EKO11_0118 NC_016902.1 119935 124785 R PFAM: YadA domain-containing protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: eoh:ECO103_4577 putative adhesin; YadA domain-containing protein complement(119935..124785) Escherichia coli KO11FL 11779262 YP_005275847.1 CDS EKO11_0119 NC_016902.1 124829 125512 R KEGG: sfv:SFV_3931 putative inner membrane lipoprotein; putative inner membrane lipoprotein complement(124829..125512) Escherichia coli KO11FL 11779263 YP_005275848.1 CDS EKO11_0120 NC_016902.1 126056 126418 R KEGG: sbc:SbBS512_E4020 hypothetical protein; hypothetical protein complement(126056..126418) Escherichia coli KO11FL 11775167 YP_005275849.1 CDS EKO11_0121 NC_016902.1 126703 126912 D KEGG: sbc:SbBS512_E4019 hypothetical protein; hypothetical protein 126703..126912 Escherichia coli KO11FL 11775168 YP_005275850.1 CDS EKO11_0122 NC_016902.1 126924 127511 R PFAM: Mannitol repressor; KEGG: ssn:SSON_3807 mannitol repressor protein; mannitol repressor, MtlR complement(126924..127511) Escherichia coli KO11FL 11775169 YP_005275851.1 CDS EKO11_0123 NC_016902.1 127511 128659 R PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: sfv:SFV_3937 mannitol-1-phosphate 5-dehydrogenase; mannitol dehydrogenase domain-containing protein complement(127511..128659) Escherichia coli KO11FL 11775170 YP_005275852.1 CDS EKO11_0124 NC_016902.1 128889 130802 R KEGG: sbc:SbBS512_E4016 PTS system, mannitol-specific IIABC component; TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphotransferase system EIIC; phosphotransferase system lactose/cellobiose-specific IIB subunit; PTS system mannitol-specific transporter subunit IIC complement(128889..130802) Escherichia coli KO11FL 11775171 YP_005275853.1 CDS EKO11_0125 NC_016902.1 131339 131701 D KEGG: sbc:SbBS512_E4015 hypothetical protein; hypothetical protein 131339..131701 Escherichia coli KO11FL 11775172 YP_005275854.1 CDS EKO11_0126 NC_016902.1 131704 132840 D PFAM: secretion protein HlyD family protein; KEGG: ebd:ECBD_0131 secretion protein HlyD family protein; secretion protein HlyD family protein 131704..132840 Escherichia coli KO11FL 11775173 YP_005275855.1 CDS EKO11_0127 NC_016902.1 133300 133737 R manually curated; KEGG: eoh:ECO103_4586 hypothetical protein; hypothetical protein complement(133300..133737) Escherichia coli KO11FL 11775174 YP_005275856.1 CDS EKO11_0128 NC_016902.1 134444 134905 R KEGG: ebw:BWG_3285 hypothetical protein; hypothetical protein complement(134444..134905) Escherichia coli KO11FL 11775175 YP_005275857.1 CDS EKO11_0129 NC_016902.1 134917 135855 R PFAM: RHS protein; KEGG: ebd:ECBD_0135 rhs protein; RHS protein complement(134917..135855) Escherichia coli KO11FL 11775176 YP_005275858.1 CDS EKO11_0130 NC_016902.1 135903 136745 R PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: ebd:ECBD_0136 hypothetical protein; PBS lyase HEAT domain-containing protein repeat-containing protein complement(135903..136745) Escherichia coli KO11FL 11775177 YP_005275859.1 CDS EKO11_0131 NC_016902.1 136850 137233 R KEGG: eoh:ECO103_4590 hypothetical protein; hypothetical protein complement(136850..137233) Escherichia coli KO11FL 11775178 YP_005275860.1 CDS EKO11_0132 NC_016902.1 137205 141440 R KEGG: eoi:ECO111_4290 RhsB core protein with extension; TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein; YD repeat protein complement(137205..141440) Escherichia coli KO11FL 11775179 YP_005275861.1 CDS EKO11_0133 NC_016902.1 141669 142277 D PFAM: Glutathione S-transferase domain; KEGG: sbc:SbBS512_E4007 putative glutathione S-transferase; glutathione S-transferase 141669..142277 Escherichia coli KO11FL 11775180 YP_005275862.1 CDS EKO11_0134 NC_016902.1 142375 143766 D TIGRFAM: L-seryl-tRNA selenium transferase; KEGG: ebd:ECBD_0139 selenocysteine synthase; PFAM: Pyridoxal phosphate-dependent transferase; L-seryl-tRNA selenium transferase 142375..143766 Escherichia coli KO11FL 11775181 YP_005275863.1 CDS EKO11_0135 NC_016902.1 143763 145607 D KEGG: eoi:ECO111_4410 selenocysteinyl-tRNA-specific translation factor; TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3; selenocysteine-specific translation elongation factor 143763..145607 Escherichia coli KO11FL 11775182 YP_005275864.1 CDS EKO11_0136 NC_016902.1 145797 146948 D PFAM: iron-containing alcohol dehydrogenase; KEGG: eoh:ECO103_4645 putative alcohol dehydrogenase; iron-containing alcohol dehydrogenase 145797..146948 Escherichia coli KO11FL 11775183 YP_005275865.1 CDS EKO11_0137 NC_016902.1 147113 148651 D PFAM: Aldehyde Dehydrogenase; KEGG: sbc:SbBS512_E4003 aldehyde dehydrogenase B; Aldehyde Dehydrogenase 147113..148651 Escherichia coli KO11FL 11775184 YP_005275866.1 CDS EKO11_0138 NC_016902.1 148870 149082 R KEGG: sfv:SFV_3946 hypothetical protein; hypothetical protein complement(148870..149082) Escherichia coli KO11FL 11775185 YP_005275867.1 CDS EKO11_0139 NC_016902.1 149196 149519 D KEGG: eoh:ECO103_4647 hypothetical protein; hypothetical protein 149196..149519 Escherichia coli KO11FL 11775186 YP_005275868.1 CDS EKO11_0140 NC_016902.1 149525 150661 D PFAM: secretion protein HlyD family protein; KEGG: eoh:ECO103_4648 membrane fusion protein (MFP) component of efflux pump, signal anchor; secretion protein HlyD family protein 149525..150661 Escherichia coli KO11FL 11779264 YP_005275869.1 CDS EKO11_0141 NC_016902.1 150658 151632 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: eok:G2583_4320 transcriptional regulator; LysR family transcriptional regulator complement(150658..151632) Escherichia coli KO11FL 11775187 YP_005275870.1 CDS EKO11_0142 NC_016902.1 151756 152496 D PFAM: MltA-interacting MipA family protein; KEGG: sfv:SFV_3952 putative outer membrane protein; MltA-interacting MipA family protein 151756..152496 Escherichia coli KO11FL 11775188 YP_005275871.1 CDS EKO11_0143 NC_016902.1 152843 153538 R KEGG: ebd:ECBD_0151 L-ribulose-5-phosphate 4-epimerase; TIGRFAM: L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein; L-ribulose-5-phosphate 4-epimerase complement(152843..153538) Escherichia coli KO11FL 11775189 YP_005275872.1 CDS EKO11_0144 NC_016902.1 153532 154392 R TIGRFAM: hexulose-6-phosphate isomerase; KEGG: ebw:BWG_3272 putative L-xylulose 5-phosphate 3-epimerase; PFAM: Xylose isomerase domain-containing protein TIM barrel; hexulose-6-phosphate isomerase complement(153532..154392) Escherichia coli KO11FL 11775190 YP_005275873.1 CDS EKO11_0145 NC_016902.1 154385 155047 R PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: eoh:ECO103_4653 3-keto-L-gulonate-6-phosphate decarboxylase; Orotidine 5'-phosphate decarboxylase complement(154385..155047) Escherichia coli KO11FL 11775191 YP_005275874.1 CDS EKO11_0146 NC_016902.1 155044 156540 R PFAM: Carbohydrate kinase, FGGY-like; KEGG: eoh:ECO103_4654 L-xylulose kinase; Carbohydrate kinase, FGGY-like protein complement(155044..156540) Escherichia coli KO11FL 11779265 YP_005275875.1 CDS EKO11_0147 NC_016902.1 156544 157530 R KEGG: sfv:SFV_3960 putative solute-binding transport protein; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7; TRAP dicarboxylate transporter subunit DctP complement(156544..157530) Escherichia coli KO11FL 11779266 YP_005275876.1 CDS EKO11_0148 NC_016902.1 157543 158820 R KEGG: ebd:ECBD_0156 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP dicarboxylate transporter subunit DctM complement(157543..158820) Escherichia coli KO11FL 11775192 YP_005275877.1 CDS EKO11_0149 NC_016902.1 158823 159296 R PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: sbc:SbBS512_E3945 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM; tripartite AtP-independent periplasmic transporter subunit DctQ complement(158823..159296) Escherichia coli KO11FL 11775193 YP_005275878.1 CDS EKO11_0150 NC_016902.1 159414 159881 R PFAM: Conserved hypothetical protein CHP00022; KEGG: eoh:ECO103_4658 hypothetical protein; hypothetical protein complement(159414..159881) Escherichia coli KO11FL 11775194 YP_005275879.1 CDS EKO11_0151 NC_016902.1 159893 160891 R PFAM: Malate/L-lactate dehydrogenase; KEGG: sfx:S4150 2,3-diketo-L-gulonate reductase; malate/L-lactate dehydrogenase complement(159893..160891) Escherichia coli KO11FL 11775195 YP_005275880.1 CDS EKO11_0152 NC_016902.1 161092 161940 D KEGG: sbo:SBO_3582 putative regulator; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; IclR family transcriptional regulator 161092..161940 Escherichia coli KO11FL 11775196 YP_005275881.1 CDS EKO11_0153 NC_016902.1 162042 162515 D KEGG: sbo:SBO_3581 hypothetical protein; hypothetical protein 162042..162515 Escherichia coli KO11FL 11775197 YP_005275882.1 CDS EKO11_0154 NC_016902.1 162666 164024 R KEGG: sfv:SFV_3968 valine--pyruvate transaminase; manually curated; PFAM: aminotransferase class I and II; class I and II aminotransferase complement(162666..164024) Escherichia coli KO11FL 11775198 YP_005275883.1 CDS EKO11_0155 NC_016902.1 164097 166127 R KEGG: eoh:ECO103_4663 periplasmic alpha-amylase precursor; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; alpha amylase complement(164097..166127) Escherichia coli KO11FL 11775199 YP_005275884.1 CDS EKO11_0156 NC_016902.1 166447 167271 D KEGG: sbc:SbBS512_E3952 hypothetical protein; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2; mannosyl-glycoprotein endo-beta-N-acetylglucosamidase 166447..167271 Escherichia coli KO11FL 11775200 YP_005275885.1 CDS EKO11_0157 NC_016902.1 167379 168557 R KEGG: sbc:SbBS512_E3953 xylose operon regulatory protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(167379..168557) Escherichia coli KO11FL 11779267 YP_005275886.1 CDS EKO11_0158 NC_016902.1 168635 169816 R PFAM: inner-membrane translocator; KEGG: sbc:SbBS512_E3954 D-xylose ABC transporter, permease protein; inner-membrane translocator complement(168635..169816) Escherichia coli KO11FL 11775201 YP_005275887.1 CDS EKO11_0159 NC_016902.1 169794 171335 R TIGRFAM: D-xylose ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: eoh:ECO103_4667 xylose transporter ATP-binding subunit; SMART: AAA ATPase; D-xylose ABC transporter ATPase complement(169794..171335) Escherichia coli KO11FL 11775202 YP_005275888.1 CDS EKO11_0160 NC_016902.1 171413 172405 R KEGG: eoh:ECO103_4668 D-xylose transporter subunit XylF; TIGRFAM: D-xylose ABC transporter, periplasmic substrate-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; D-xylose ABC transporter periplasmic substrate-binding protein complement(171413..172405) Escherichia coli KO11FL 11775203 YP_005275889.1 CDS EKO11_0161 NC_016902.1 172771 174093 D TIGRFAM: xylose isomerase; KEGG: ebd:ECBD_0169 xylose isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel; xylose isomerase 172771..174093 Escherichia coli KO11FL 11779268 YP_005275890.1 CDS EKO11_0162 NC_016902.1 174165 175619 D KEGG: eoh:ECO103_4670 xylulokinase XylB; TIGRFAM: xylulokinase; PFAM: Carbohydrate kinase, FGGY-like; xylulokinase 174165..175619 Escherichia coli KO11FL 11775204 YP_005275891.1 CDS EKO11_0163 NC_016902.1 175788 176129 D PFAM: YiaAB two helix domain-containing protein; KEGG: sbo:SBO_3571 hypothetical protein; YiaAB two helix domain-containing protein 175788..176129 Escherichia coli KO11FL 11775205 YP_005275892.1 CDS EKO11_0164 NC_016902.1 176175 176612 D PFAM: YiaAB two helix domain-containing protein; KEGG: eoh:ECO103_4672 hypothetical protein; YiaAB two helix domain-containing protein 176175..176612 Escherichia coli KO11FL 11775206 YP_005275893.1 CDS EKO11_0165 NC_016902.1 176654 177649 R PFAM: acyltransferase 3; KEGG: sfv:SFV_3979 hypothetical protein; acyltransferase 3 complement(176654..177649) Escherichia coli KO11FL 11775207 YP_005275894.1 CDS EKO11_0166 NC_016902.1 177824 178123 D KEGG: sbc:SbBS512_E3964 hypothetical protein; hypothetical protein 177824..178123 Escherichia coli KO11FL 11779269 YP_005275895.1 CDS EKO11_0167 NC_016902.1 178218 179129 D TIGRFAM: glycyl-tRNA synthetase, alpha subunit; KEGG: cko:CKO_05016 glycyl-tRNA synthetase subunit alpha; PFAM: glycyl-tRNA synthetase alpha subunit; glycyl-tRNA synthetase subunit alpha 178218..179129 Escherichia coli KO11FL 11779270 YP_005275896.1 CDS EKO11_0168 NC_016902.1 179139 181208 D TIGRFAM: glycyl-tRNA synthetase, beta subunit; KEGG: ssn:SSON_3830 glycyl-tRNA synthetase subunit beta; glycyl-tRNA synthetase subunit beta 179139..181208 Escherichia coli KO11FL 11775208 YP_005275897.1 CDS EKO11_0169 NC_016902.1 181509 182030 D KEGG: sfx:S1483 IS103 orf; transposase 181509..182030 Escherichia coli KO11FL 11775209 YP_005275898.1 CDS EKO11_0170 NC_016902.1 182027 182878 D KEGG: ebd:ECBD_4284 integrase catalytic region; manually curated; PFAM: Integrase catalytic region; integrase catalytic subunit 182027..182878 Escherichia coli KO11FL 11775210 YP_005275899.1 CDS EKO11_0171 NC_016902.1 182920 183216 D PFAM: Hok/gef cell toxic protein; KEGG: eok:G2583_4299 small toxic polypeptide; Hok/gef cell toxic protein 182920..183216 Escherichia coli KO11FL 11775211 YP_005275900.1 CDS EKO11_0172 NC_016902.1 183320 183532 R KEGG: cko:CKO_05012 major cold shock protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock protein complement(183320..183532) Escherichia coli KO11FL 11775212 YP_005275901.1 CDS EKO11_0173 NC_016902.1 183813 184103 R KEGG: sdy:SDY_4348 putative transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; transcriptional regulator, XRE family complement(183813..184103) Escherichia coli KO11FL 11775213 YP_005275902.1 CDS EKO11_0174 NC_016902.1 184537 185247 D KEGG: eoh:ECO103_4680 hypothetical protein; hypothetical protein 184537..185247 Escherichia coli KO11FL 11775214 YP_005275903.1 CDS EKO11_0175 NC_016902.1 185297 186271 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: sbc:SbBS512_E3973 2-ketogluconate reductase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein complement(185297..186271) Escherichia coli KO11FL 11775215 YP_005275904.1 CDS EKO11_0176 NC_016902.1 186375 187034 R PFAM: OmpA/MotB domain protein; KEGG: eok:G2583_4294 inner membrane lipoprotein YiaD precursor; OmpA/MotB domain-containing protein complement(186375..187034) Escherichia coli KO11FL 11775216 YP_005275905.1 CDS EKO11_0177 NC_016902.1 187187 189520 D TIGRFAM: molybdopterin guanine dinucleotide-containing S/N-oxide reductase; KEGG: eoh:ECO103_4683 biotin sulfoxide reductase BisC; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin guanine dinucleotide-containing S/N-oxide reductase 187187..189520 Escherichia coli KO11FL 11775217 YP_005275906.1 CDS EKO11_0178 NC_016902.1 189489 189929 R PFAM: GCN5-related N-acetyltransferase; KEGG: ssn:SSON_3840 hypothetical protein; N-acetyltransferase GCN5 complement(189489..189929) Escherichia coli KO11FL 11775218 YP_005275907.1 CDS EKO11_0179 NC_016902.1 189926 190489 R TIGRFAM: DNA-3-methyladenine glycosylase I; KEGG: ssn:SSON_3841 3-methyl-adenine DNA glycosylase I; PFAM: methyladenine glycosylase; DNA-3-methyladenine glycosylase I complement(189926..190489) Escherichia coli KO11FL 11775219 YP_005275908.1 CDS EKO11_0180 NC_016902.1 190647 191345 D KEGG: sbc:SbBS512_E3978 hypothetical protein; hypothetical protein 190647..191345 Escherichia coli KO11FL 11775220 YP_005275909.1 CDS EKO11_0181 NC_016902.1 191574 192776 D KEGG: ssn:SSON_3843 putative resistance protein; TIGRFAM: Oxalate/Formate Antiporter; PFAM: major facilitator superfamily MFS_1; Oxalate/Formate Antiporter 191574..192776 Escherichia coli KO11FL 11775221 YP_005275910.1 CDS EKO11_0182 NC_016902.1 193100 193624 D PFAM: Fimbrial protein domain-containing protein; KEGG: eoh:ECO103_4688 putative major fimbrial subunit; fimbrial protein domain-containing protein 193100..193624 Escherichia coli KO11FL 11775222 YP_005275911.1 CDS EKO11_0183 NC_016902.1 193708 194394 D PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: eoi:ECO111_4365 putative fimbrial chaperone protein; Pili assembly chaperone, N-terminal protein 193708..194394 Escherichia coli KO11FL 11779271 YP_005275912.1 CDS EKO11_0184 NC_016902.1 194418 196949 D PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: eoh:ECO103_4690 putative fimbrial usher protein; fimbrial biogenesis outer membrane usher protein 194418..196949 Escherichia coli KO11FL 11775223 YP_005275913.1 CDS EKO11_0185 NC_016902.1 196960 198015 D KEGG: eoh:ECO103_4691 putative minor fimbrial subunit; putative minor fimbrial subunit 196960..198015 Escherichia coli KO11FL 11775224 YP_005275914.1 CDS EKO11_0186 NC_016902.1 198021 198545 D PFAM: Fimbrial protein domain-containing protein; KEGG: sbc:SbBS512_E3982 protein LpfE; fimbrial protein domain-containing protein 198021..198545 Escherichia coli KO11FL 11779272 YP_005275915.1 CDS EKO11_0187 NC_016902.1 198798 200489 D PFAM: sulfatase; protein of unknown function DUF1705; KEGG: sbc:SbBS512_E3983 phosphoethanolamine transferase; sulfatase 198798..200489 Escherichia coli KO11FL 11775225 YP_005275916.1 CDS EKO11_0188 NC_016902.1 201570 203177 D PFAM: extracellular solute-binding protein family 5; KEGG: ebd:ECBD_0192 extracellular solute-binding protein family 5; family 5 extracellular solute-binding protein 201570..203177 Escherichia coli KO11FL 11775227 YP_005275917.1 CDS EKO11_0189 NC_016902.1 203240 203467 R manually curated; KEGG: sbc:SbBS512_E3987 hypothetical protein; hypothetical protein complement(203240..203467) Escherichia coli KO11FL 11775228 YP_005275918.1 CDS EKO11_0190 NC_016902.1 203485 204504 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eoi:ECO111_4359 dipeptide transporter permease DppB; binding-protein-dependent transport system inner membrane protein 203485..204504 Escherichia coli KO11FL 11775229 YP_005275919.1 CDS EKO11_0191 NC_016902.1 204514 205416 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: efe:EFER_3539 dipeptide transporter; binding-protein-dependent transport system inner membrane protein 204514..205416 Escherichia coli KO11FL 11775230 YP_005275920.1 CDS EKO11_0192 NC_016902.1 205427 206410 D TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: sbo:SBO_3540 dipeptide transporter ATP-binding subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 205427..206410 Escherichia coli KO11FL 11775231 YP_005275921.1 CDS EKO11_0193 NC_016902.1 206407 207411 D TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: eoi:ECO111_4356 dipeptide transporter ATP-binding subunit; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 206407..207411 Escherichia coli KO11FL 11775232 YP_005275922.1 CDS EKO11_0194 NC_016902.1 207441 208712 R TIGRFAM: serine transporter; KEGG: sbc:SbBS512_E3992 serine transporter family protein; serine transporter complement(207441..208712) Escherichia coli KO11FL 11775233 YP_005275923.1 CDS EKO11_0196 NC_016902.1 209188 209295 D KEGG: sbc:SbBS512_E3995 hypothetical protein; hypothetical protein 209188..209295 Escherichia coli KO11FL 11775235 YP_005275924.1 CDS EKO11_0197 NC_016902.1 209300 209599 R manually curated; KEGG: spq:SPAB_04504 hypothetical protein; hypothetical protein complement(209300..209599) Escherichia coli KO11FL 11775236 YP_005275925.1 CDS EKO11_0198 NC_016902.1 209671 209778 D KEGG: sbc:SbBS512_E3995 hypothetical protein; hypothetical protein 209671..209778 Escherichia coli KO11FL 11775237 YP_005275926.1 CDS EKO11_0200 NC_016902.1 209986 210261 D manually curated; KEGG: sfl:SF3572 hypothetical protein; hypothetical protein 209986..210261 Escherichia coli KO11FL 11775239 YP_005275927.1 CDS EKO11_0201 NC_016902.1 210348 212027 R TIGRFAM: cellulose synthase operon protein YhjU; KEGG: eok:G2583_4274 hypothetical protein; cellulose synthase operon protein YhjU complement(210348..212027) Escherichia coli KO11FL 11775240 YP_005275928.1 CDS EKO11_0202 NC_016902.1 212024 212215 R TIGRFAM: celllulose biosynthesis operon protein BcsF/YhjT; KEGG: sbc:SbBS512_E3999 cellulose biosynthesis protein BcsF; celllulose biosynthesis operon protein BcsF/YhjT complement(212024..212215) Escherichia coli KO11FL 11775241 YP_005275929.1 CDS EKO11_0203 NC_016902.1 212212 213771 R TIGRFAM: cellulose biosynthesis protein BcsE; KEGG: ebr:ECB_03384 hypothetical protein; cellulose biosynthesis protein BcsE complement(212212..213771) Escherichia coli KO11FL 11775242 YP_005275930.1 CDS EKO11_0204 NC_016902.1 214056 214244 D KEGG: sbo:SBO_3534 hypothetical protein; hypothetical protein 214056..214244 Escherichia coli KO11FL 11775243 YP_005275931.1 CDS EKO11_0205 NC_016902.1 214256 215008 D KEGG: eok:G2583_4270 ATPases involved in chromosome partitioning; TIGRFAM: cellulose synthase operon protein YhjQ; PFAM: Cellulose synthase operon protein YhjQ; cellulose synthase operon protein YhjQ 214256..215008 Escherichia coli KO11FL 11775244 YP_005275932.1 CDS EKO11_0206 NC_016902.1 215005 217623 D KEGG: ebd:ECBD_0206 cellulose synthase catalytic subunit; TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: glycosyl transferase family 2; type IV pilus assembly PilZ; cellulose synthase catalytic subunit 215005..217623 Escherichia coli KO11FL 11775245 YP_005275933.1 CDS EKO11_0207 NC_016902.1 217670 219973 D PFAM: Cellulose synthase BcsB; KEGG: ebd:ECBD_0207 cellulose synthase regulator protein; Cellulose synthase BcsB 217670..219973 Escherichia coli KO11FL 11779273 YP_005275934.1 CDS EKO11_0208 NC_016902.1 219980 221086 D KEGG: eoh:ECO103_4259 endo-1,4-D-glucanase; PFAM: glycoside hydrolase family 8; cellulase 219980..221086 Escherichia coli KO11FL 11775246 YP_005275935.1 CDS EKO11_0209 NC_016902.1 221068 224541 D PFAM: cellulose synthase operon C domain protein; Tetratricopeptide TPR_1 repeat-containing protein; KEGG: eok:G2583_4266 cellulose synthase operon protein C; cellulose synthase operon C domain-containing protein 221068..224541 Escherichia coli KO11FL 11775247 YP_005275936.1 CDS EKO11_0210 NC_016902.1 224662 226611 D TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; histidine kinase HAMP region domain protein; GGDEF domain containing protein; KEGG: sbc:SbBS512_E3935 putative phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase with extracellular sensor 224662..226611 Escherichia coli KO11FL 11775248 YP_005275937.1 CDS EKO11_0211 NC_016902.1 226794 228080 D PFAM: sodium:dicarboxylate symporter; KEGG: sbc:SbBS512_E3934 C4-dicarboxylate transporter DctA; sodium:dicarboxylate symporter 226794..228080 Escherichia coli KO11FL 11775249 YP_005275938.1 CDS EKO11_0212 NC_016902.1 228301 229797 D PFAM: peptidase M16 domain protein; KEGG: sdy:SDY_4547 hypothetical protein; peptidase M16 domain-containing protein 228301..229797 Escherichia coli KO11FL 11779274 YP_005275939.1 CDS EKO11_0213 NC_016902.1 229893 230822 R PFAM: PfkB domain protein; KEGG: eoh:ECO103_4254 ketodeoxygluconokinase KdgK; PfkB domain-containing protein complement(229893..230822) Escherichia coli KO11FL 11775250 YP_005275940.1 CDS EKO11_0214 NC_016902.1 231054 231821 D KEGG: sdy:SDY_4545 EAL domain-containing protein; PFAM: EAL domain protein; SMART: EAL domain protein; diguanylate phosphodiesterase 231054..231821 Escherichia coli KO11FL 11775251 YP_005275941.1 CDS EKO11_0215 NC_016902.1 231891 233951 D PFAM: AsmA family protein; KEGG: sbc:SbBS512_E3929 AsmA family protein; AsmA family protein 231891..233951 Escherichia coli KO11FL 11775252 YP_005275942.1 CDS EKO11_0216 NC_016902.1 234185 235507 R TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); KEGG: eoh:ECO103_4251 putative transporter; metabolite/H+ symporter, major facilitator superfamily (MFS) complement(234185..235507) Escherichia coli KO11FL 11775253 YP_005275943.1 CDS EKO11_0217 NC_016902.1 235918 236931 R KEGG: sbc:SbBS512_E3927 putative ribonuclease; TIGRFAM: ribonuclease; PFAM: ribonuclease BN; ribonuclease complement(235918..236931) Escherichia coli KO11FL 11775254 YP_005275944.1 CDS EKO11_0218 NC_016902.1 236980 237951 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eoh:ECO103_4249 putative DNA-binding transcriptional regulator; LysR family transcriptional regulator complement(236980..237951) Escherichia coli KO11FL 11775255 YP_005275945.1 CDS EKO11_0219 NC_016902.1 238399 239001 D KEGG: eoh:ECO103_4248 putative DNA-binding response regulator in two-component regulatory system; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; LuxR family transcriptional regulator 238399..239001 Escherichia coli KO11FL 11779275 YP_005275946.1 CDS EKO11_0220 NC_016902.1 239052 240701 R KEGG: ssn:SSON_3567 trehalase; PFAM: glycoside hydrolase family 37; Alpha,alpha-trehalase complement(239052..240701) Escherichia coli KO11FL 11775256 YP_005275947.1 CDS EKO11_0221 NC_016902.1 241106 242503 D KEGG: eoh:ECO103_4246 putative cytochrome c peroxidase; PFAM: Di-haem cytochrome c peroxidase; cytochrome-c peroxidase 241106..242503 Escherichia coli KO11FL 11775257 YP_005275948.1 CDS EKO11_0222 NC_016902.1 242714 244114 D TIGRFAM: glutamate decarboxylase; KEGG: sbo:SBO_3516 glutamate decarboxylase isozyme; PFAM: Pyridoxal-dependent decarboxylase; glutamate decarboxylase 242714..244114 Escherichia coli KO11FL 11775258 YP_005275949.1 CDS EKO11_0223 NC_016902.1 244484 245308 D KEGG: sbc:SbBS512_E3914 DNA-binding transcriptional regulator GadX; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 244484..245308 Escherichia coli KO11FL 11775259 YP_005275950.1 CDS EKO11_0224 NC_016902.1 245676 246404 D KEGG: sbc:SbBS512_E3913 transcriptional regulator GadW; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 245676..246404 Escherichia coli KO11FL 11779276 YP_005275951.1 CDS EKO11_0225 NC_016902.1 246549 246830 D KEGG: efe:EFER_3040 hypothetical protein; putative exported protein; hypothetical protein 246549..246830 Escherichia coli KO11FL 11775260 YP_005275952.1 CDS EKO11_0226 NC_016902.1 246767 249880 R KEGG: ssn:SSON_3572 putative transport system permease protein; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(246767..249880) Escherichia coli KO11FL 11775261 YP_005275953.1 CDS EKO11_0227 NC_016902.1 249905 251062 R KEGG: sbo:SBO_3512 multidrug efflux system protein MdtE; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(249905..251062) Escherichia coli KO11FL 11775262 YP_005275954.1 CDS EKO11_0228 NC_016902.1 251122 251400 D KEGG: ebd:ECBD_0228 hypothetical protein; hypothetical protein 251122..251400 Escherichia coli KO11FL 11775263 YP_005275955.1 CDS EKO11_0229 NC_016902.1 251401 251928 R KEGG: ssn:SSON_3574 hypothetical protein; hypothetical protein complement(251401..251928) Escherichia coli KO11FL 11779277 YP_005275956.1 CDS EKO11_0230 NC_016902.1 252727 253299 R KEGG: sbc:SbBS512_E3909 acid-resistance membrane protein; acid-resistance membrane protein complement(252727..253299) Escherichia coli KO11FL 11775264 YP_005275957.1 CDS EKO11_0231 NC_016902.1 253554 253886 D PFAM: HNS-dependent expression A; KEGG: sdy:SDY_3543 acid-resistance protein; HNS-dependent expression A 253554..253886 Escherichia coli KO11FL 11779278 YP_005275958.1 CDS EKO11_0232 NC_016902.1 253990 254328 D KEGG: sbc:SbBS512_E3907 acid-resistance protein; acid-resistance protein 253990..254328 Escherichia coli KO11FL 11775265 YP_005275959.1 CDS EKO11_0233 NC_016902.1 254392 255039 D KEGG: ebd:ECBD_0233 putative Mg(2+) transport ATPase; manually curated; PFAM: MgtC/SapB transporter; MgtC/SapB transporter 254392..255039 Escherichia coli KO11FL 11775266 YP_005275960.1 CDS EKO11_0234 NC_016902.1 255081 255611 R KEGG: ebd:ECBD_0234 transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; regulatory protein LuxR complement(255081..255611) Escherichia coli KO11FL 11775267 YP_005275961.1 CDS EKO11_0235 NC_016902.1 255767 256333 R KEGG: sbc:SbBS512_E3904 outer membrane lipoprotein, Slp family; TIGRFAM: outer membrane lipoprotein, Slp family; PFAM: outer membrane lipoprotein Slp; outer membrane lipoprotein, Slp family complement(255767..256333) Escherichia coli KO11FL 11775268 YP_005275962.1 CDS EKO11_0237 NC_016902.1 258383 259384 R PFAM: permease; KEGG: eoh:ECO103_4232 hypothetical protein; permease complement(258383..259384) Escherichia coli KO11FL 11775269 YP_005275963.1 CDS EKO11_0238 NC_016902.1 259492 259788 D KEGG: sbo:SBO_3502 hypothetical protein; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; regulatory protein ArsR 259492..259788 Escherichia coli KO11FL 11775270 YP_005275964.1 CDS EKO11_0239 NC_016902.1 259916 260356 R TIGRFAM: arsenate reductase; KEGG: sbc:SbBS512_E3818 arsenate reductase; PFAM: arsenate reductase and related; arsenate reductase complement(259916..260356) Escherichia coli KO11FL 11775271 YP_005275965.1 CDS EKO11_0240 NC_016902.1 260369 261658 R KEGG: sbo:SBO_3500 arsenical pump membrane protein; TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein; arsenical pump membrane protein complement(260369..261658) Escherichia coli KO11FL 11775272 YP_005275966.1 CDS EKO11_0241 NC_016902.1 261712 262065 R KEGG: ssn:SSON_3736 DNA-binding transcriptional repressor ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; ArsR family transcriptional regulator complement(261712..262065) Escherichia coli KO11FL 11775273 YP_005275967.1 CDS EKO11_0242 NC_016902.1 262604 262777 R KEGG: ebd:ECBD_0240 hypothetical protein; hypothetical protein complement(262604..262777) Escherichia coli KO11FL 11775274 YP_005275968.1 CDS EKO11_0243 NC_016902.1 262942 264294 R KEGG: ebd:ECBD_0241 glutathione reductase; TIGRFAM: glutathione-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; glutathione-disulfide reductase complement(262942..264294) Escherichia coli KO11FL 11775275 YP_005275969.1 CDS EKO11_0244 NC_016902.1 264366 265208 R PFAM: protein of unknown function DUF519; KEGG: sbo:SBO_3497 hypothetical protein; hypothetical protein complement(264366..265208) Escherichia coli KO11FL 11775276 YP_005275970.1 CDS EKO11_0245 NC_016902.1 265411 267453 D KEGG: ebd:ECBD_0243 oligopeptidase A; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; oligopeptidase A 265411..267453 Escherichia coli KO11FL 11775277 YP_005275971.1 CDS EKO11_0246 NC_016902.1 267461 268213 D PFAM: protein of unknown function DUF548; KEGG: ssn:SSON_3732 putative methyltransferase; hypothetical protein 267461..268213 Escherichia coli KO11FL 11775278 YP_005275972.1 CDS EKO11_0247 NC_016902.1 268262 269731 R KEGG: ebd:ECBD_0245 inner membrane transporter YhiP; TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; amino acid/peptide transporter complement(268262..269731) Escherichia coli KO11FL 11775279 YP_005275973.1 CDS EKO11_0248 NC_016902.1 270049 270483 R PFAM: UspA domain-containing protein; KEGG: cro:ROD_43041 universal stress protein A; UspA domain-containing protein complement(270049..270483) Escherichia coli KO11FL 11779280 YP_005275974.1 CDS EKO11_0249 NC_016902.1 270874 271209 D PFAM: Universal stress protein B; KEGG: sdy:SDY_3568 universal stress protein UspB; Universal stress protein B 270874..271209 Escherichia coli KO11FL 11775280 YP_005275975.1 CDS EKO11_0250 NC_016902.1 271280 272779 R PFAM: phosphate transporter; KEGG: sdy:SDY_3569 low-affinity phosphate transport; phosphate transporter complement(271280..272779) Escherichia coli KO11FL 11775281 YP_005275976.1 CDS EKO11_0251 NC_016902.1 273011 274213 D PFAM: HI0933 family protein; KEGG: eoh:ECO103_4218 putative oxidoreductase; hypothetical protein 273011..274213 Escherichia coli KO11FL 11775282 YP_005275977.1 CDS EKO11_0252 NC_016902.1 274529 275581 R KEGG: eok:G2583_4217 inner membrane protein YhiM; inner membrane protein YhiM complement(274529..275581) Escherichia coli KO11FL 11775283 YP_005275978.1 CDS EKO11_0253 NC_016902.1 275965 277554 D KEGG: sfl:SF3505 hypothetical protein; hypothetical protein 275965..277554 Escherichia coli KO11FL 11775284 YP_005275979.1 CDS EKO11_0254 NC_016902.1 277816 279438 D KEGG: eoh:ECO103_4214 hypothetical protein; hypothetical protein 277816..279438 Escherichia coli KO11FL 11775285 YP_005275980.1 CDS EKO11_0255 NC_016902.1 279804 280871 D PFAM: secretion protein HlyD family protein; KEGG: efe:EFER_3479 putative HlyD family secretion protein; secretion protein HlyD family protein 279804..280871 Escherichia coli KO11FL 11775286 YP_005275981.1 CDS EKO11_0256 NC_016902.1 280868 283603 D KEGG: ebd:ECBD_0254 ABC transporter related; PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; ABC transporter 280868..283603 Escherichia coli KO11FL 11775287 YP_005275982.1 CDS EKO11_0257 NC_016902.1 283603 284727 D PFAM: ABC-2 type transporter; KEGG: eoi:ECO111_4294 putative transporter subunit; ABC transporter 283603..284727 Escherichia coli KO11FL 11775288 YP_005275983.1 CDS EKO11_0259 NC_016902.1 285058 285417 D KEGG: ssn:SSON_3720 hypothetical protein; hypothetical protein 285058..285417 Escherichia coli KO11FL 11775290 YP_005275984.1 CDS EKO11_0260 NC_016902.1 285537 285938 R KEGG: sdy:SDY_3636 nickel responsive regulator; TIGRFAM: nickel-responsive transcriptional regulator NikR; PFAM: NikR nickel binding; CopG family transcriptional regulator complement(285537..285938) Escherichia coli KO11FL 11775291 YP_005275985.1 CDS EKO11_0261 NC_016902.1 285944 286750 R TIGRFAM: nickel import ATP-binding protein NikE; PFAM: ABC transporter related; KEGG: eoh:ECO103_4200 nickel transporter ATP-binding protein NikE; SMART: AAA ATPase; nickel import ATP-binding protein NikE complement(285944..286750) Escherichia coli KO11FL 11775292 YP_005275986.1 CDS EKO11_0262 NC_016902.1 286747 287511 R TIGRFAM: nickel import ATP-binding protein NikD; PFAM: ABC transporter related; KEGG: ebd:ECBD_0262 nickel transporter ATP-binding protein NikD; SMART: AAA ATPase; nickel import ATP-binding protein NikD complement(286747..287511) Escherichia coli KO11FL 11775293 YP_005275987.1 CDS EKO11_0263 NC_016902.1 287511 288344 R KEGG: ssn:SSON_3716 nickel transporter permease NikC; TIGRFAM: nickel ABC transporter, permease subunit NikC; PFAM: binding-protein-dependent transport systems inner membrane component; nickel ABC transporter permease NikC complement(287511..288344) Escherichia coli KO11FL 11775294 YP_005275988.1 CDS EKO11_0264 NC_016902.1 288341 289285 R KEGG: sbc:SbBS512_E3844 nickel transporter permease NikB; TIGRFAM: nickel ABC transporter, permease subunit NikB; PFAM: binding-protein-dependent transport systems inner membrane component; nickel ABC transporter permease NikB complement(288341..289285) Escherichia coli KO11FL 11775295 YP_005275989.1 CDS EKO11_0265 NC_016902.1 289285 290859 R KEGG: eoh:ECO103_4196 periplasmic binding protein for nickel NikA; TIGRFAM: nickel ABC transporter, periplasmic nickel-binding protein; PFAM: extracellular solute-binding protein family 5; nickel ABC transporter periplasmic nickel-binding protein complement(289285..290859) Escherichia coli KO11FL 11775296 YP_005275990.1 CDS EKO11_0266 NC_016902.1 290970 291557 R PFAM: 4'-phosphopantetheinyl transferase; KEGG: sbo:SBO_3472 holo-(acyl carrier protein) synthase 2; 4'-phosphopantetheinyl transferase complement(290970..291557) Escherichia coli KO11FL 11775297 YP_005275991.1 CDS EKO11_0267 NC_016902.1 291612 292661 R PFAM: protein of unknown function UPF0118; KEGG: ebd:ECBD_0267 protein of unknown function UPF0118; hypothetical protein complement(291612..292661) Escherichia coli KO11FL 11775298 YP_005275992.1 CDS EKO11_0268 NC_016902.1 292751 294010 D PFAM: major facilitator superfamily MFS_1; KEGG: sbc:SbBS512_E3849 major facilitator superfamily transporter; major facilitator superfamily protein 292751..294010 Escherichia coli KO11FL 11775299 YP_005275993.1 CDS EKO11_0269 NC_016902.1 294014 294625 R manually curated; KEGG: eoh:ECO103_4192 hypothetical protein; hypothetical protein complement(294014..294625) Escherichia coli KO11FL 11775300 YP_005275994.1 CDS EKO11_0270 NC_016902.1 294644 295309 R KEGG: sfx:S4274 hypothetical protein; TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF165; hypothetical protein complement(294644..295309) Escherichia coli KO11FL 11775301 YP_005275995.1 CDS EKO11_0271 NC_016902.1 295530 295775 D PFAM: SirA-like domain-containing protein; KEGG: sdy:SDY_3621 sulfur transfer protein SirA; SirA-like domain-containing protein 295530..295775 Escherichia coli KO11FL 11775302 YP_005275996.1 CDS EKO11_0272 NC_016902.1 295877 298075 R KEGG: ssn:SSON_3707 zinc/cadmium/mercury/lead-transporting ATPase; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; heavy metal translocating P-type ATPase complement(295877..298075) Escherichia coli KO11FL 11779281 YP_005275997.1 CDS EKO11_0273 NC_016902.1 298149 298775 R PFAM: YhhN family protein; KEGG: sbc:SbBS512_E3854 hypothetical protein; hypothetical protein complement(298149..298775) Escherichia coli KO11FL 11775303 YP_005275998.1 CDS EKO11_0274 NC_016902.1 298916 299275 D PFAM: Protein of unknown function DUF2500; KEGG: sbo:SBO_3464 putative receptor; hypothetical protein 298916..299275 Escherichia coli KO11FL 11775304 YP_005275999.1 CDS EKO11_0275 NC_016902.1 299278 299547 R PFAM: protein of unknown function DUF1145; KEGG: sdy:SDY_3617 hypothetical protein; hypothetical protein complement(299278..299547) Escherichia coli KO11FL 11779282 YP_005276000.1 CDS EKO11_0276 NC_016902.1 299537 300133 R TIGRFAM: methyltransferase; KEGG: sbo:SBO_3462 16S rRNA m(2)G966-methyltransferase; PFAM: Conserved hypothetical protein CHP00095; methyltransferase complement(299537..300133) Escherichia coli KO11FL 11775305 YP_005276001.1 CDS EKO11_0277 NC_016902.1 300283 301776 D TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; KEGG: eoh:ECO103_4184 cell division protein FtsY; SMART: AAA ATPase; signal recognition particle-docking protein FtsY 300283..301776 Escherichia coli KO11FL 11779283 YP_005276002.1 CDS EKO11_0278 NC_016902.1 301779 302447 D TIGRFAM: Type II (General) Secretory Pathway (IISP) Family protein; cell division ATP-binding protein FtsE; PFAM: ABC transporter related; KEGG: sdy:SDY_3614 cell division protein FtsE; SMART: AAA ATPase; Type II (General) Secretory Pathway (IISP) Family protein 301779..302447 Escherichia coli KO11FL 11775306 YP_005276003.1 CDS EKO11_0279 NC_016902.1 302440 303498 D KEGG: sdy:SDY_3613 cell division protein FtsX; TIGRFAM: protein insertion ABC transporter, inner membrane subunit FtsX; PFAM: protein of unknown function DUF214; protein insertion ABC transporter inner membrane subunit FtsX 302440..303498 Escherichia coli KO11FL 11775307 YP_005276004.1 CDS EKO11_0280 NC_016902.1 303743 304597 D KEGG: sdy:SDY_3612 RNA polymerase factor sigma-32; TIGRFAM: RNA polymerase sigma factor RpoH; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; RNA polymerase sigma-32 subunit RpoH 303743..304597 Escherichia coli KO11FL 11779284 YP_005276005.1 CDS EKO11_0281 NC_016902.1 304868 305971 D PFAM: Extracellular ligand-binding receptor; KEGG: sbo:SBO_3457 high-affinity amino acid transport system periplasmic binding protein; extracellular ligand-binding receptor 304868..305971 Escherichia coli KO11FL 11775308 YP_005276006.1 CDS EKO11_0282 NC_016902.1 306121 306387 D PFAM: protein of unknown function DUF1778; KEGG: eok:G2583_4162 hypothetical protein; hypothetical protein 306121..306387 Escherichia coli KO11FL 11775309 YP_005276007.1 CDS EKO11_0283 NC_016902.1 306394 306921 D PFAM: GCN5-related N-acetyltransferase; KEGG: eok:G2583_4161 hypothetical protein; N-acetyltransferase GCN5 306394..306921 Escherichia coli KO11FL 11775310 YP_005276008.1 CDS EKO11_0284 NC_016902.1 306918 307301 R PFAM: GCN5-related N-acetyltransferase; KEGG: sbo:SBO_3456 hypothetical protein; N-acetyltransferase GCN5 complement(306918..307301) Escherichia coli KO11FL 11775311 YP_005276009.1 CDS EKO11_0285 NC_016902.1 307725 308834 D PFAM: Extracellular ligand-binding receptor; KEGG: sbc:SbBS512_E3864 high-affinity branched-chain amino acid ABC transporter, periplasmic leucine-specific-binding protein LivK; extracellular ligand-binding receptor 307725..308834 Escherichia coli KO11FL 11775312 YP_005276010.1 CDS EKO11_0286 NC_016902.1 308882 309808 D PFAM: inner-membrane translocator; KEGG: sbc:SbBS512_E3865 branched-chain amino acid transporter permease subunit LivH; inner-membrane translocator 308882..309808 Escherichia coli KO11FL 11775313 YP_005276011.1 CDS EKO11_0287 NC_016902.1 309805 311082 D PFAM: inner-membrane translocator; KEGG: sbc:SbBS512_E3866 leucine/isoleucine/valine transporter permease subunit; inner-membrane translocator 309805..311082 Escherichia coli KO11FL 11775314 YP_005276012.1 CDS EKO11_0288 NC_016902.1 311079 311846 D KEGG: ssn:SSON_3693 leucine/isoleucine/valine transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 311079..311846 Escherichia coli KO11FL 11775315 YP_005276013.1 CDS EKO11_0289 NC_016902.1 311848 312561 D KEGG: ssn:SSON_3692 leucine/isoleucine/valine transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 311848..312561 Escherichia coli KO11FL 11775316 YP_005276014.1 CDS EKO11_0290 NC_016902.1 312958 314274 D PFAM: extracellular solute-binding protein family 1; KEGG: efe:EFER_3425 glycerol-3-phosphate transporter periplasmic binding protein; extracellular solute-binding protein 312958..314274 Escherichia coli KO11FL 11775317 YP_005276015.1 CDS EKO11_0291 NC_016902.1 314372 315259 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eoi:ECO111_4260 glycerol-3-phosphate transporter permease; binding-protein-dependent transport system inner membrane protein 314372..315259 Escherichia coli KO11FL 11775318 YP_005276016.1 CDS EKO11_0292 NC_016902.1 315256 316101 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbc:SbBS512_E3872 glycerol-3-phosphate transporter membrane protein; binding-protein-dependent transport system inner membrane protein 315256..316101 Escherichia coli KO11FL 11775319 YP_005276017.1 CDS EKO11_0293 NC_016902.1 316103 317173 D KEGG: eoi:ECO111_4258 glycerol-3-phosphate transporter ATP-binding subunit; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; ABC transporter 316103..317173 Escherichia coli KO11FL 11775320 YP_005276018.1 CDS EKO11_0294 NC_016902.1 317170 317913 D PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: sbc:SbBS512_E3875 cytoplasmic glycerophosphodiester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 317170..317913 Escherichia coli KO11FL 11775321 YP_005276019.1 CDS EKO11_0295 NC_016902.1 317900 318340 R KEGG: sbc:SbBS512_E3874 hypothetical protein; hypothetical protein complement(317900..318340) Escherichia coli KO11FL 11775322 YP_005276020.1 CDS EKO11_0296 NC_016902.1 318460 320202 D TIGRFAM: gamma-glutamyltransferase; KEGG: eoi:ECO111_4255 gamma-glutamyltranspeptidase; PFAM: gamma-glutamyltranspeptidase; gamma-glutamyltransferase 318460..320202 Escherichia coli KO11FL 11775323 YP_005276021.1 CDS EKO11_0297 NC_016902.1 320240 320524 R KEGG: sbc:SbBS512_E3877 hypothetical protein; hypothetical protein complement(320240..320524) Escherichia coli KO11FL 11779285 YP_005276022.1 CDS EKO11_0298 NC_016902.1 320724 320879 R KEGG: ebd:ECBD_0296 hypothetical protein; hypothetical protein complement(320724..320879) Escherichia coli KO11FL 11775324 YP_005276023.1 CDS EKO11_0299 NC_016902.1 320974 321468 R KEGG: ebr:ECB_03294 hypothetical protein; hypothetical protein complement(320974..321468) Escherichia coli KO11FL 11775325 YP_005276024.1 CDS EKO11_0300 NC_016902.1 321465 322643 R KEGG: eoh:ECO103_4164 hypothetical protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; HNH endonuclease; type VI secretion system effector complement(321465..322643) Escherichia coli KO11FL 11779286 YP_005276025.1 CDS EKO11_0301 NC_016902.1 322880 323446 R KEGG: sfv:SFV_3449 putative acetyltransferase YhhY; manually curated; PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(322880..323446) Escherichia coli KO11FL 11775326 YP_005276026.1 CDS EKO11_0302 NC_016902.1 323700 324737 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ebd:ECBD_0302 putative dehydrogenase; oxidoreductase domain-containing protein 323700..324737 Escherichia coli KO11FL 11775327 YP_005276027.1 CDS EKO11_0303 NC_016902.1 324860 325555 D PFAM: Pirin domain protein; KEGG: sbc:SbBS512_E3886 pirin family protein; Pirin domain-containing protein 324860..325555 Escherichia coli KO11FL 11779287 YP_005276028.1 CDS EKO11_0304 NC_016902.1 325779 326774 D KEGG: eoi:ECO111_4248 DNA-binding transcriptional repressor GntR; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; LacI family transcriptional regulator 325779..326774 Escherichia coli KO11FL 11775328 YP_005276029.1 CDS EKO11_0305 NC_016902.1 326913 327440 D TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; KEGG: ssn:SSON_3679 gluconate kinase 1; PFAM: shikimate kinase; thermoresistant glucokinase family carbohydrate kinase 326913..327440 Escherichia coli KO11FL 11775329 YP_005276030.1 CDS EKO11_0306 NC_016902.1 327444 328784 D KEGG: sdy:SDY_3587 low affinity gluconate transporter; TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; gluconate transporter 327444..328784 Escherichia coli KO11FL 11775330 YP_005276031.1 CDS EKO11_0307 NC_016902.1 328841 329434 R PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: sdy:SDY_3580 putative dITP- and XTP- hydrolase; multiple antibiotic resistance (MarC)-like protein complement(328841..329434) Escherichia coli KO11FL 11775331 YP_005276032.1 CDS EKO11_0308 NC_016902.1 329626 330729 D TIGRFAM: aspartate-semialdehyde dehydrogenase; KEGG: sbo:SBO_3431 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding; aspartate-semialdehyde dehydrogenase 329626..330729 Escherichia coli KO11FL 11775332 YP_005276033.1 CDS EKO11_0309 NC_016902.1 331002 333188 D TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; KEGG: ssn:SSON_3672 glycogen branching enzyme; SMART: alpha amylase catalytic sub domain; 1,4-alpha-glucan-branching protein 331002..333188 Escherichia coli KO11FL 11775333 YP_005276034.1 CDS EKO11_0310 NC_016902.1 333185 335158 D KEGG: eok:G2583_4132 glycogen debranching enzyme; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; glycogen debranching protein GlgX 333185..335158 Escherichia coli KO11FL 11775334 YP_005276035.1 CDS EKO11_0311 NC_016902.1 335176 336471 D KEGG: sdy:SDY_3576 glucose-1-phosphate adenylyltransferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; glucose-1-phosphate adenylyltransferase 335176..336471 Escherichia coli KO11FL 11775335 YP_005276036.1 CDS EKO11_0312 NC_016902.1 336471 337904 D KEGG: ebd:ECBD_0313 glycogen synthase; TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain-containing protein; glycosyl transferase group 1; glycogen/starch synthase 336471..337904 Escherichia coli KO11FL 11775336 YP_005276037.1 CDS EKO11_0313 NC_016902.1 337923 340370 D TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; KEGG: sdy:SDY_3574 glycogen phosphorylase; PFAM: glycosyl transferase family 35; glycogen/starch/alpha-glucan phosphorylase 337923..340370 Escherichia coli KO11FL 11775337 YP_005276038.1 CDS EKO11_0314 NC_016902.1 340498 342003 D KEGG: eoh:ECO103_4148 hypothetical protein; hypothetical protein 340498..342003 Escherichia coli KO11FL 11775338 YP_005276039.1 CDS EKO11_0315 NC_016902.1 342018 342728 D KEGG: eoh:ECO103_4147 hypothetical protein; hypothetical protein 342018..342728 Escherichia coli KO11FL 11775339 YP_005276040.1 CDS EKO11_0316 NC_016902.1 342731 343498 D KEGG: eoh:ECO103_4146 hypothetical protein; hypothetical protein 342731..343498 Escherichia coli KO11FL 11775340 YP_005276041.1 CDS EKO11_0317 NC_016902.1 343501 344106 D KEGG: eoh:ECO103_4145 hypothetical protein; hypothetical protein 343501..344106 Escherichia coli KO11FL 11779288 YP_005276042.1 CDS EKO11_0318 NC_016902.1 344160 345665 R KEGG: sfl:SF3448 glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase; glycerol-3-phosphate dehydrogenase complement(344160..345665) Escherichia coli KO11FL 11775341 YP_005276043.1 CDS EKO11_0319 NC_016902.1 345855 346181 D PFAM: Rhodanese domain protein; KEGG: ssn:SSON_3662 thiosulfate sulfurtransferase; SMART: Rhodanese domain protein; thiosulfate sulfurtransferase 345855..346181 Escherichia coli KO11FL 11775342 YP_005276044.1 CDS EKO11_0320 NC_016902.1 346226 347056 D KEGG: eoh:ECO103_4142 intramembrane serine protease GlpG; PFAM: Rhomboid family protein; rhomboid protease 346226..347056 Escherichia coli KO11FL 11779289 YP_005276045.1 CDS EKO11_0321 NC_016902.1 347073 347831 D KEGG: sdy:SDY_3652 DNA-binding transcriptional repressor GlpR; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator 347073..347831 Escherichia coli KO11FL 11775343 YP_005276046.1 CDS EKO11_0322 NC_016902.1 347813 349411 R KEGG: eoh:ECO103_4140 sigma 54-dependent transcriptional regulator of rtcBA expression; PFAM: regulator of RNA terminal phosphate cyclase; sigma-54 factor interaction domain-containing protein; SMART: AAA ATPase; sigma-54 interacting domain-containing protein complement(347813..349411) Escherichia coli KO11FL 11775344 YP_005276047.1 CDS EKO11_0323 NC_016902.1 349600 350826 D PFAM: protein of unknown function UPF0027; KEGG: eoi:ECO111_4229 hypothetical protein; hypothetical protein 349600..350826 Escherichia coli KO11FL 11779290 YP_005276048.1 CDS EKO11_0324 NC_016902.1 350830 351846 D TIGRFAM: RNA 3'-phosphate cyclase; KEGG: eoi:ECO111_4228 RNA 3'-terminal-phosphate cyclase; PFAM: RNA 3'-terminal phosphate cyclase; RNA 3'-terminal phosphate cyclase insert region; RNA 3'-phosphate cyclase 350830..351846 Escherichia coli KO11FL 11775345 YP_005276049.1 CDS EKO11_0325 NC_016902.1 351889 354594 R KEGG: eok:G2583_4115 transcriptional regulator MalT; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; LuxR family ATP-dependent transcriptional regulator complement(351889..354594) Escherichia coli KO11FL 11775346 YP_005276050.1 CDS EKO11_0327 NC_016902.1 357609 359693 D TIGRFAM: 4-alpha-glucanotransferase; KEGG: ssn:SSON_3548 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77; 4-alpha-glucanotransferase 357609..359693 Escherichia coli KO11FL 11775348 YP_005276051.1 CDS EKO11_0328 NC_016902.1 359738 361054 R KEGG: sbc:SbBS512_E3796 high-affinity gluconate transporter; TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; gluconate transporter complement(359738..361054) Escherichia coli KO11FL 11775349 YP_005276052.1 CDS EKO11_0329 NC_016902.1 361415 361990 R KEGG: sdy:SDY_3662 putative DNA uptake protein; TIGRFAM: IscR-regulated protein YhgI; PFAM: HesB/YadR/YfhF-family protein; nitrogen-fixing NifU domain protein; IscR-regulated protein YhgI complement(361415..361990) Escherichia coli KO11FL 11775350 YP_005276053.1 CDS EKO11_0330 NC_016902.1 362049 362732 R KEGG: sfv:SFV_3421 gluconate periplasmic binding protein; TIGRFAM: comF family protein; PFAM: phosphoribosyltransferase; comF family protein complement(362049..362732) Escherichia coli KO11FL 11775351 YP_005276054.1 CDS EKO11_0331 NC_016902.1 362770 363540 D TIGRFAM: bioH protein; KEGG: eoi:ECO111_4221 carboxylesterase BioH; PFAM: alpha/beta hydrolase fold; bioH protein 362770..363540 Escherichia coli KO11FL 11775352 YP_005276055.1 CDS EKO11_0333 NC_016902.1 364650 364886 R PFAM: protein of unknown function DUF1920; KEGG: sdy:SDY_3666 hypothetical protein; hypothetical protein complement(364650..364886) Escherichia coli KO11FL 11775354 YP_005276056.1 CDS EKO11_0334 NC_016902.1 364886 367207 R KEGG: sbc:SbBS512_E3790 ferrous iron transport protein B; TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: Ferrous iron transport protein B domain-containing protein; GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport B domain-containing protein; ferrous iron transport protein B complement(364886..367207) Escherichia coli KO11FL 11775355 YP_005276057.1 CDS EKO11_0335 NC_016902.1 367224 367451 R KEGG: sdy:SDY_3668 ferrous iron transport protein A; PFAM: FeoA family protein; SMART: FeoA family protein; FeoA family protein complement(367224..367451) Escherichia coli KO11FL 11775356 YP_005276058.1 CDS EKO11_0336 NC_016902.1 367889 370210 R KEGG: sbc:SbBS512_E3786 putative transcriptional accessory protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; Tex-like protein complement(367889..370210) Escherichia coli KO11FL 11775357 YP_005276059.1 CDS EKO11_0337 NC_016902.1 370307 370783 R KEGG: sdy:SDY_3670 transcription elongation factor GreB; TIGRFAM: transcription elongation factor GreB; PFAM: transcription elongation factor GreA/GreB domain-containing protein; transcription elongation factor GreB complement(370307..370783) Escherichia coli KO11FL 11779291 YP_005276060.1 CDS EKO11_0338 NC_016902.1 371011 371730 D KEGG: pam:PANA_3682 OmpR; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; two component transcriptional regulator, winged helix family 371011..371730 Escherichia coli KO11FL 11775358 YP_005276061.1 CDS EKO11_0339 NC_016902.1 371727 373079 D KEGG: sdy:SDY_3672 osmolarity sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; integral membrane sensor signal transduction histidine kinase 371727..373079 Escherichia coli KO11FL 11775359 YP_005276062.1 CDS EKO11_0340 NC_016902.1 373111 373407 R KEGG: efe:EFER_3371 putative HTH-type transcriptional regulator YiaG; putative HTH-type transcriptional regulator YiaG complement(373111..373407) Escherichia coli KO11FL 11775360 YP_005276063.1 CDS EKO11_0341 NC_016902.1 373466 373783 R KEGG: efe:EFER_3370 hypothetical protein; hypothetical protein complement(373466..373783) Escherichia coli KO11FL 11775361 YP_005276064.1 CDS EKO11_0342 NC_016902.1 373900 375522 R TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); KEGG: sbc:SbBS512_E3782 phosphoenolpyruvate carboxykinase; PFAM: phosphoenolpyruvate carboxykinase (ATP); phosphoenolpyruvate carboxykinase complement(373900..375522) Escherichia coli KO11FL 11775362 YP_005276065.1 CDS EKO11_0343 NC_016902.1 375901 377625 D KEGG: eok:G2583_4098 hypothetical protein; hypothetical protein 375901..377625 Escherichia coli KO11FL 11775363 YP_005276066.1 CDS EKO11_0344 NC_016902.1 377688 378566 R PFAM: Hsp33 protein; KEGG: sdy:SDY_3677 HSP33-like chaperonin; Hsp33 protein complement(377688..378566) Escherichia coli KO11FL 11775364 YP_005276067.1 CDS EKO11_0345 NC_016902.1 378591 378992 R KEGG: sdy:SDY_3678 ribosome-associated heat shock protein HSP15; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; RNA-binding S4 domain-containing protein complement(378591..378992) Escherichia coli KO11FL 11775365 YP_005276068.1 CDS EKO11_0346 NC_016902.1 379003 379671 R KEGG: sdy:SDY_3679 putative phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase complement(379003..379671) Escherichia coli KO11FL 11779292 YP_005276069.1 CDS EKO11_0347 NC_016902.1 379736 381871 R PFAM: Intracellular growth attenuator IgaA; KEGG: eoh:ECO103_4116 putative inner membrane protein; intracellular growth attenuator igaA complement(379736..381871) Escherichia coli KO11FL 11775366 YP_005276070.1 CDS EKO11_0348 NC_016902.1 382191 382751 D PFAM: NUDIX hydrolase; KEGG: sbc:SbBS512_E3774 ADP-ribose diphosphatase NudE; NUDIX hydrolase 382191..382751 Escherichia coli KO11FL 11775367 YP_005276071.1 CDS EKO11_0349 NC_016902.1 382916 385468 R TIGRFAM: penicillin-binding protein, 1A family; KEGG: ebd:ECBD_0351 peptidoglycan synthetase; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; penicillin-binding protein complement(382916..385468) Escherichia coli KO11FL 11779293 YP_005276072.1 CDS EKO11_0350 NC_016902.1 385588 386367 D KEGG: eoi:ECO111_4204 putative pilus assembly protein; putative pilus assembly protein 385588..386367 Escherichia coli KO11FL 11775368 YP_005276073.1 CDS EKO11_0351 NC_016902.1 386367 386906 D PFAM: Fimbrial assembly family protein; KEGG: eoh:ECO103_4112 putative fimbrial assembly protein; fimbrial assembly family protein 386367..386906 Escherichia coli KO11FL 11775369 YP_005276074.1 CDS EKO11_0352 NC_016902.1 386890 387330 D KEGG: sfv:SFV_3398 hypothetical protein; hypothetical protein 386890..387330 Escherichia coli KO11FL 11775370 YP_005276075.1 CDS EKO11_0353 NC_016902.1 387320 387724 D KEGG: sdy:SDY_3687 hypothetical protein; hypothetical protein 387320..387724 Escherichia coli KO11FL 11775371 YP_005276076.1 CDS EKO11_0354 NC_016902.1 387636 388874 D manually curated; TIGRFAM: type IV pilus secretin PilQ; KEGG: ebd:ECBD_0356 outer membrane porin HofQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; type IV pilus secretin PilQ 387636..388874 Escherichia coli KO11FL 11775372 YP_005276077.1 CDS EKO11_0355 NC_016902.1 389275 389796 D KEGG: sdy:SDY_3689 shikimate kinase I; PFAM: shikimate kinase; shikimate kinase 389275..389796 Escherichia coli KO11FL 11775373 YP_005276078.1 CDS EKO11_0356 NC_016902.1 389853 390941 D TIGRFAM: 3-dehydroquinate synthase; KEGG: sbo:SBO_3376 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase; 3-dehydroquinate synthase 389853..390941 Escherichia coli KO11FL 11775374 YP_005276079.1 CDS EKO11_0357 NC_016902.1 391033 392319 D PFAM: Sporulation domain-containing protein; KEGG: ebd:ECBD_0359 hypothetical protein; sporulation domain-containing protein 391033..392319 Escherichia coli KO11FL 11775375 YP_005276080.1 CDS EKO11_0358 NC_016902.1 392426 393262 D KEGG: sbc:SbBS512_E3764 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; DNA adenine methylase 392426..393262 Escherichia coli KO11FL 11775376 YP_005276081.1 CDS EKO11_0359 NC_016902.1 393280 393957 D TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: sbc:SbBS512_E3763 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 393280..393957 Escherichia coli KO11FL 11775377 YP_005276082.1 CDS EKO11_0360 NC_016902.1 393950 394708 D KEGG: sbc:SbBS512_E3762 phosphoglycolate phosphatase; TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; phosphoglycolate phosphatase 393950..394708 Escherichia coli KO11FL 11775378 YP_005276083.1 CDS EKO11_0361 NC_016902.1 394701 395705 D TIGRFAM: tryptophanyl-tRNA synthetase; KEGG: ebd:ECBD_0363 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; tryptophanyl-tRNA synthetase 394701..395705 Escherichia coli KO11FL 11775379 YP_005276084.1 CDS EKO11_0362 NC_016902.1 395865 396770 D KEGG: eoh:ECO103_4101 hypothetical protein; hypothetical protein 395865..396770 Escherichia coli KO11FL 11775380 YP_005276085.1 CDS EKO11_0363 NC_016902.1 396787 397149 D KEGG: sbc:SbBS512_E3759 hypothetical protein; hypothetical protein 396787..397149 Escherichia coli KO11FL 11775381 YP_005276086.1 CDS EKO11_0364 NC_016902.1 397233 398396 D PFAM: alanine racemase domain protein; KEGG: eoi:ECO111_4190 putative amino acid racemase; alanine racemase 397233..398396 Escherichia coli KO11FL 11775382 YP_005276087.1 CDS EKO11_0365 NC_016902.1 398396 399622 D KEGG: eoi:ECO111_4189 putative mutase; PFAM: metalloenzyme domain protein; phosphopentomutase 398396..399622 Escherichia coli KO11FL 11775383 YP_005276088.1 CDS EKO11_0366 NC_016902.1 399619 400497 D PFAM: aryldialkylphosphatase; KEGG: eoi:ECO111_4188 putative hydrolase; aryldialkylphosphatase 399619..400497 Escherichia coli KO11FL 11775384 YP_005276089.1 CDS EKO11_0367 NC_016902.1 400508 400861 D KEGG: sbc:SbBS512_E3755 hypothetical protein; hypothetical protein 400508..400861 Escherichia coli KO11FL 11775385 YP_005276090.1 CDS EKO11_0368 NC_016902.1 400873 402177 D PFAM: Protein of unknown function, YhfT; KEGG: eoh:ECO103_4095 hypothetical protein; hypothetical protein 400873..402177 Escherichia coli KO11FL 11779294 YP_005276091.1 CDS EKO11_0369 NC_016902.1 402189 403274 D PFAM: aminotransferase class I and II; KEGG: ebw:BWG_3067 hypothetical protein; class I and II aminotransferase 402189..403274 Escherichia coli KO11FL 11775386 YP_005276092.1 CDS EKO11_0370 NC_016902.1 403426 404157 R KEGG: sbc:SbBS512_E3752 DNA-binding transcriptional regulator FrlR; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator complement(403426..404157) Escherichia coli KO11FL 11775387 YP_005276093.1 CDS EKO11_0371 NC_016902.1 404257 405042 R PFAM: PfkB domain protein; KEGG: sbc:SbBS512_E3751 fructoselysine 6-kinase; PfkB domain-containing protein complement(404257..405042) Escherichia coli KO11FL 11779295 YP_005276094.1 CDS EKO11_0372 NC_016902.1 405039 405869 R PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: eoh:ECO103_4091 fructoselysine 3-epimerase; xylose isomerase domain-containing protein complement(405039..405869) Escherichia coli KO11FL 11775388 YP_005276095.1 CDS EKO11_0373 NC_016902.1 405919 406941 R PFAM: sugar isomerase (SIS); KEGG: sfv:SFV_3377 fructoselysine-6-P-deglycase; sugar isomerase (SIS) complement(405919..406941) Escherichia coli KO11FL 11775389 YP_005276096.1 CDS EKO11_0374 NC_016902.1 406962 408299 R PFAM: amino acid permease-associated region; KEGG: ssn:SSON_3502 putative fructoselysine transporter; amino acid permease complement(406962..408299) Escherichia coli KO11FL 11779296 YP_005276097.1 CDS EKO11_0375 NC_016902.1 408594 408761 R KEGG: sbc:SbBS512_E3747 putative lipoprotein; putative lipoprotein complement(408594..408761) Escherichia coli KO11FL 11775390 YP_005276098.1 CDS EKO11_0376 NC_016902.1 409008 410381 R KEGG: ebd:ECBD_0380 siroheme synthase; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Sirohaem synthase, dimerisation domain; uroporphyrin-III C-methyltransferase complement(409008..410381) Escherichia coli KO11FL 11775391 YP_005276099.1 CDS EKO11_0377 NC_016902.1 410400 411206 R KEGG: sfv:SFV_3373 nitrite transporter NirC; TIGRFAM: formate/nitrite transporter; PFAM: formate/nitrite transporter; formate/nitrite transporter complement(410400..411206) Escherichia coli KO11FL 11775392 YP_005276100.1 CDS EKO11_0378 NC_016902.1 411333 411659 R KEGG: sdy:SDY_3528 nitrite reductase small subunit; TIGRFAM: nitrite reductase [NAD(P)H], small subunit; nitrite reductase (NAD(P)H) small subunit complement(411333..411659) Escherichia coli KO11FL 11775393 YP_005276101.1 CDS EKO11_0379 NC_016902.1 411656 414199 R KEGG: sbc:SbBS512_E3741 nitrite reductase [NAD(P)H], large subunit; TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; nitrite reductase (NAD(P)H) large subunit complement(411656..414199) Escherichia coli KO11FL 11775394 YP_005276102.1 CDS EKO11_0380 NC_016902.1 414461 415642 R PFAM: major facilitator superfamily MFS_1; KEGG: eoh:ECO103_4083 hypothetical protein; major facilitator superfamily protein complement(414461..415642) Escherichia coli KO11FL 11775395 YP_005276103.1 CDS EKO11_0381 NC_016902.1 415913 416485 D KEGG: sbc:SbBS512_E3738 peptidyl-prolyl cis-trans isomerase A (rotamase A); PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; peptidylprolyl isomerase 415913..416485 Escherichia coli KO11FL 11775396 YP_005276104.1 CDS EKO11_0382 NC_016902.1 416590 416757 D KEGG: ssn:SSON_3493 hypothetical protein; hypothetical protein 416590..416757 Escherichia coli KO11FL 11775397 YP_005276105.1 CDS EKO11_0383 NC_016902.1 416747 417349 D PFAM: filamentation induced by cAMP protein Fic; KEGG: eoh:ECO103_4080 cell filamentation protein Fic; filamentation induced by cAMP protein fic 416747..417349 Escherichia coli KO11FL 11775398 YP_005276106.1 CDS EKO11_0384 NC_016902.1 417381 417944 D KEGG: ebd:ECBD_0388 para-aminobenzoate synthase component II; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; glutamine amidotransferase of anthranilate synthase 417381..417944 Escherichia coli KO11FL 11775399 YP_005276107.1 CDS EKO11_0385 NC_016902.1 418030 419250 D TIGRFAM: succinylornithine transaminase family; acetylornithine and succinylornithine aminotransferase; KEGG: eoh:ECO103_4078 bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; PFAM: aminotransferase class-III; succinylornithine transaminase family 418030..419250 Escherichia coli KO11FL 11775400 YP_005276108.1 CDS EKO11_0386 NC_016902.1 419317 421407 R TIGRFAM: integral membrane protein, YccS/YhfK family; KEGG: sbc:SbBS512_E3734 integral membrane protein, YccS/YhfK family; YccS/YhfK family integral membrane protein complement(419317..421407) Escherichia coli KO11FL 11775401 YP_005276109.1 CDS EKO11_0387 NC_016902.1 421458 422090 R KEGG: etr:ETAE_3299 cAMP-regulatory protein; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; CarD family transcriptional regulator complement(421458..422090) Escherichia coli KO11FL 11775402 YP_005276110.1 CDS EKO11_0388 NC_016902.1 422392 422796 D PFAM: OsmC family protein; KEGG: sdy:SDY_3518 hypothetical protein; OsmC family protein 422392..422796 Escherichia coli KO11FL 11775403 YP_005276111.1 CDS EKO11_0389 NC_016902.1 422851 423720 R KEGG: sbo:SBO_3335 phosphoribulokinase; phosphoribulokinase complement(422851..423720) Escherichia coli KO11FL 11775404 YP_005276112.1 CDS EKO11_0390 NC_016902.1 423774 423992 R PFAM: protein of unknown function UPF0270; KEGG: sbc:SbBS512_E3729 hypothetical protein; hypothetical protein complement(423774..423992) Escherichia coli KO11FL 11775405 YP_005276113.1 CDS EKO11_0391 NC_016902.1 423986 425008 R PFAM: alpha/beta hydrolase fold; KEGG: eoh:ECO103_4072 putative hydrolase; alpha/beta hydrolase fold protein complement(423986..425008) Escherichia coli KO11FL 11779297 YP_005276114.1 CDS EKO11_0392 NC_016902.1 425008 426921 R KEGG: ssn:SSON_3483 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(425008..426921) Escherichia coli KO11FL 11775406 YP_005276115.1 CDS EKO11_0393 NC_016902.1 427052 427603 D PFAM: NAD(P)H dehydrogenase (quinone); KEGG: efe:EFER_3322 glutathione-regulated potassium-efflux system ancillary protein KefG; NAD(P)H dehydrogenase (quinone) 427052..427603 Escherichia coli KO11FL 11775407 YP_005276116.1 CDS EKO11_0394 NC_016902.1 427603 429408 D KEGG: ssn:SSON_3481 glutathione-regulated potassium-efflux system protein KefB; TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; potassium efflux system protein 427603..429408 Escherichia coli KO11FL 11779298 YP_005276117.1 CDS EKO11_0395 NC_016902.1 429418 429618 D PFAM: Conserved hypothetical protein CHP02443; KEGG: sdy:SDY_3511 hypothetical protein; hypothetical protein 429418..429618 Escherichia coli KO11FL 11775408 YP_005276118.1 CDS EKO11_0396 NC_016902.1 429713 430303 D KEGG: sbc:SbBS512_E3723 FKBP-type peptidyl-prolyl cis-trans isomerase; PFAM: peptidylprolyl isomerase FKBP-type; peptidylprolyl isomerase 429713..430303 Escherichia coli KO11FL 11775409 YP_005276119.1 CDS EKO11_0397 NC_016902.1 430352 430570 R PFAM: SlyX family protein; KEGG: sdy:SDY_3509 hypothetical protein; SlyX family protein complement(430352..430570) Escherichia coli KO11FL 11775410 YP_005276120.1 CDS EKO11_0398 NC_016902.1 430791 431603 D KEGG: sbo:SBO_3327 FKBP-type peptidyl-prolyl cis-trans isomerase; PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase FKBP-type; peptidylprolyl isomerase 430791..431603 Escherichia coli KO11FL 11775411 YP_005276121.1 CDS EKO11_0399 NC_016902.1 431770 432492 D PFAM: YheO-like domain-containing protein; KEGG: sbc:SbBS512_E3720 hypothetical protein; YheO-like domain-containing protein 431770..432492 Escherichia coli KO11FL 11775412 YP_005276122.1 CDS EKO11_0400 NC_016902.1 432492 432878 D KEGG: ebd:ECBD_0404 sulfur transfer complex subunit TusD; TIGRFAM: sulfur relay protein TusD/DsrE; PFAM: DsrE family protein; sulfur relay protein TusD/DsrE 432492..432878 Escherichia coli KO11FL 11775413 YP_005276123.1 CDS EKO11_0401 NC_016902.1 432878 433237 D KEGG: sbc:SbBS512_E3718 sulfur relay protein TusC; TIGRFAM: sulfur relay protein TusC/DsrF; PFAM: DsrE family protein; sulfur relay protein TusC/DsrF 432878..433237 Escherichia coli KO11FL 11775414 YP_005276124.1 CDS EKO11_0402 NC_016902.1 433245 433532 D KEGG: sbc:SbBS512_E3717 sulfur transfer complex subunit TusB; TIGRFAM: sulfur relay protein TusB/DsrH; PFAM: DsrH family protein; sulfur relay protein TusB/DsrH 433245..433532 Escherichia coli KO11FL 11775415 YP_005276125.1 CDS EKO11_0403 NC_016902.1 433658 434032 D KEGG: cro:ROD_44771 30S ribosomal subunit protein S12; TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23; 30S ribosomal protein S12 433658..434032 Escherichia coli KO11FL 11775416 YP_005276126.1 CDS EKO11_0404 NC_016902.1 434129 434599 D KEGG: sbc:SbBS512_E3715 30S ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7; 30S ribosomal protein S7 434129..434599 Escherichia coli KO11FL 11775417 YP_005276127.1 CDS EKO11_0405 NC_016902.1 434696 436810 D KEGG: sdy:SDY_3501 elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain-containing protein; translation elongation factor G 434696..436810 Escherichia coli KO11FL 11775418 YP_005276128.1 CDS EKO11_0406 NC_016902.1 436881 438065 D KEGG: ses:SARI_04181 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain-containing protein; translation elongation factor Tu 436881..438065 Escherichia coli KO11FL 11775419 YP_005276129.1 CDS EKO11_0407 NC_016902.1 438248 438442 D PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: sdy:SDY_3499 bacterioferritin-associated ferredoxin; BFD (2Fe-2S)-binding domain-containing protein 438248..438442 Escherichia coli KO11FL 11775420 YP_005276130.1 CDS EKO11_0408 NC_016902.1 438515 438991 D KEGG: sfv:SFV_3342 bacterioferritin; TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein; bacterioferritin 438515..438991 Escherichia coli KO11FL 11775421 YP_005276131.1 CDS EKO11_0409 NC_016902.1 438988 439455 R PFAM: peptidase A24A prepilin type IV; KEGG: eoh:ECO103_4054 leader peptidase HopD; peptidase A24A prepilin type IV complement(438988..439455) Escherichia coli KO11FL 11775422 YP_005276132.1 CDS EKO11_0410 NC_016902.1 439834 440145 D KEGG: sdy:SDY_3497 30S ribosomal protein S10; TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10; 30S ribosomal protein S10 439834..440145 Escherichia coli KO11FL 11775423 YP_005276133.1 CDS EKO11_0411 NC_016902.1 440178 440807 D KEGG: sdy:SDY_3496 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: ribosomal protein L3; 50S ribosomal protein L3 440178..440807 Escherichia coli KO11FL 11779299 YP_005276134.1 CDS EKO11_0412 NC_016902.1 440818 441423 D PFAM: ribosomal protein L4/L1e; KEGG: cro:ROD_45031 50S ribosomal subunit protein L4; 50S ribosomal protein L4 440818..441423 Escherichia coli KO11FL 11775424 YP_005276135.1 CDS EKO11_0413 NC_016902.1 441420 441722 D PFAM: Ribosomal protein L25/L23; KEGG: sbc:SbBS512_E3703 50S ribosomal protein L23; 50S ribosomal protein L25 441420..441722 Escherichia coli KO11FL 11775425 YP_005276136.1 CDS EKO11_0414 NC_016902.1 441740 442561 D KEGG: ctu:Ctu_38440 50S ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2; 50S ribosomal protein L2 441740..442561 Escherichia coli KO11FL 11779300 YP_005276137.1 CDS EKO11_0415 NC_016902.1 442578 442856 D KEGG: cro:ROD_45061 30S ribosomal subunit protein S19; TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15; 30S ribosomal protein S19 442578..442856 Escherichia coli KO11FL 11775426 YP_005276138.1 CDS EKO11_0416 NC_016902.1 442871 443203 D KEGG: cro:ROD_45071 50S ribosomal subunit protein L22; TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17; 50S ribosomal protein L22 442871..443203 Escherichia coli KO11FL 11775427 YP_005276139.1 CDS EKO11_0417 NC_016902.1 443221 443922 D TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; Ribosomal protein S3 domain; KH type 2 domain protein; KEGG: cro:ROD_45081 30S ribosomal subunit protein S3; SMART: KH domain protein; 30S ribosomal protein S3 443221..443922 Escherichia coli KO11FL 11775428 YP_005276140.1 CDS EKO11_0418 NC_016902.1 443935 444345 D KEGG: cko:CKO_04727 50S ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L10e/L16; 50S ribosomal protein L16 443935..444345 Escherichia coli KO11FL 11775429 YP_005276141.1 CDS EKO11_0419 NC_016902.1 444345 444536 D KEGG: sbc:SbBS512_E3697 50S ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; 50S ribosomal protein L29 444345..444536 Escherichia coli KO11FL 11775430 YP_005276142.1 CDS EKO11_0420 NC_016902.1 444536 444790 D KEGG: ctu:Ctu_38380 30S ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: ribosomal protein S17; 30S ribosomal protein S17 444536..444790 Escherichia coli KO11FL 11775431 YP_005276143.1 CDS EKO11_0421 NC_016902.1 444955 445326 D KEGG: sdy:SDY_3486 50S ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e; 50S ribosomal protein L14 444955..445326 Escherichia coli KO11FL 11775432 YP_005276144.1 CDS EKO11_0422 NC_016902.1 445337 445651 D TIGRFAM: ribosomal protein L24; PFAM: KOW domain protein; KEGG: dda:Dd703_0416 50S ribosomal protein L24; SMART: KOW domain protein; 50S ribosomal protein L24 445337..445651 Escherichia coli KO11FL 11775433 YP_005276145.1 CDS EKO11_0423 NC_016902.1 445666 446205 D KEGG: kpu:KP1_5029 50S ribosomal protein L5; 50S ribosomal protein L5 445666..446205 Escherichia coli KO11FL 11775434 YP_005276146.1 CDS EKO11_0424 NC_016902.1 446220 446525 D PFAM: ribosomal protein S14; KEGG: sdy:SDY_3483 30S ribosomal protein S14; 30S ribosomal protein S14 446220..446525 Escherichia coli KO11FL 11779301 YP_005276147.1 CDS EKO11_0425 NC_016902.1 446559 446951 D PFAM: ribosomal protein S8; KEGG: cko:CKO_04720 30S ribosomal protein S8; 30S ribosomal protein S8 446559..446951 Escherichia coli KO11FL 11775435 YP_005276148.1 CDS EKO11_0426 NC_016902.1 446964 447497 D KEGG: sdy:SDY_3481 50S ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain; 50S ribosomal protein L6 446964..447497 Escherichia coli KO11FL 11775436 YP_005276149.1 CDS EKO11_0427 NC_016902.1 447507 447860 D KEGG: cko:CKO_04717 50S ribosomal protein L18; TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; 50S ribosomal protein L18 447507..447860 Escherichia coli KO11FL 11775437 YP_005276150.1 CDS EKO11_0428 NC_016902.1 447875 448378 D KEGG: cro:ROD_45191 30S ribosomal subunit protein S5; TIGRFAM: ribosomal protein S5; PFAM: ribosomal protein S5 domain protein; Ribosomal protein S5; 30S ribosomal protein S5 447875..448378 Escherichia coli KO11FL 11775438 YP_005276151.1 CDS EKO11_0429 NC_016902.1 448382 448561 D KEGG: sdy:SDY_3478 50S ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30; 50S ribosomal protein L30 448382..448561 Escherichia coli KO11FL 11775439 YP_005276152.1 CDS EKO11_0430 NC_016902.1 448565 448999 D TIGRFAM: ribosomal protein L15; KEGG: cko:CKO_04713 50S ribosomal protein L15; 50S ribosomal protein L15 448565..448999 Escherichia coli KO11FL 11779302 YP_005276153.1 CDS EKO11_0431 NC_016902.1 449007 450338 D KEGG: sbc:SbBS512_E3685 preprotein translocase subunit SecY; TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; preprotein translocase subunit SecY 449007..450338 Escherichia coli KO11FL 11775440 YP_005276154.1 CDS EKO11_0432 NC_016902.1 450370 450486 D KEGG: cro:ROD_45222 50S ribosomal subunit protein L36; TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36; 50S ribosomal protein L36 450370..450486 Escherichia coli KO11FL 11775441 YP_005276155.1 CDS EKO11_0433 NC_016902.1 450633 450989 D KEGG: sdy:SDY_3474 30S ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: ribosomal protein S13; 30S ribosomal protein S13 450633..450989 Escherichia coli KO11FL 11775442 YP_005276156.1 CDS EKO11_0434 NC_016902.1 451006 451395 D KEGG: cro:ROD_45241 30S ribosomal subunit protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: ribosomal protein S11; 30S ribosomal protein S11 451006..451395 Escherichia coli KO11FL 11775443 YP_005276157.1 CDS EKO11_0435 NC_016902.1 451429 452049 D TIGRFAM: ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: cko:CKO_04709 30S ribosomal protein S4; SMART: RNA-binding S4 domain protein; 30S ribosomal protein S4 451429..452049 Escherichia coli KO11FL 11775444 YP_005276158.1 CDS EKO11_0436 NC_016902.1 452075 453064 D TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase insert; RNA polymerase dimerisation; RNA polymerase alpha subunit domain protein; KEGG: cro:ROD_45261 DNA-directed RNA polymerase alpha chain; SMART: RNA polymerase RpoA/D/Rpb3-type; DNA-directed RNA polymerase subunit alpha 452075..453064 Escherichia coli KO11FL 11775445 YP_005276159.1 CDS EKO11_0437 NC_016902.1 453105 453488 D KEGG: sdy:SDY_3470 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; 50S ribosomal protein L17 453105..453488 Escherichia coli KO11FL 11775446 YP_005276160.1 CDS EKO11_0438 NC_016902.1 453595 453963 D PFAM: DnaJ homologue, subfamily C, member 28, conserved domain; KEGG: eok:G2583_4011 hypothetical protein; DnaJ family protein 453595..453963 Escherichia coli KO11FL 11775447 YP_005276161.1 CDS EKO11_0439 NC_016902.1 453974 454399 D TIGRFAM: Zn(II)-responsive transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; KEGG: sdy:SDY_3468 zinc-responsive transcriptional regulator; SMART: regulatory protein MerR; MerR family transcriptional regulator 453974..454399 Escherichia coli KO11FL 11775448 YP_005276162.1 CDS EKO11_0440 NC_016902.1 454455 454673 D PFAM: protein of unknown function DUF331; KEGG: eoh:ECO103_4023 hypothetical protein; hypothetical protein 454455..454673 Escherichia coli KO11FL 11775449 YP_005276163.1 CDS EKO11_0441 NC_016902.1 454670 455080 R KEGG: efe:EFER_3274 large-conductance mechanosensitive channel; TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; large conductance mechanosensitive channel protein complement(454670..455080) Escherichia coli KO11FL 11775450 YP_005276164.1 CDS EKO11_0442 NC_016902.1 455210 456586 R PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: sbc:SbBS512_E3674 potassium transporter peripheral membrane component; TrkA-N domain-containing protein complement(455210..456586) Escherichia coli KO11FL 11775451 YP_005276165.1 CDS EKO11_0443 NC_016902.1 456608 457897 R KEGG: eoh:ECO103_4020 16S rRNA methyltransferase B; TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; sun protein complement(456608..457897) Escherichia coli KO11FL 11775452 YP_005276166.1 CDS EKO11_0444 NC_016902.1 457943 458890 R TIGRFAM: methionyl-tRNA formyltransferase; KEGG: eoh:ECO103_4019 methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; methionyl-tRNA formyltransferase complement(457943..458890) Escherichia coli KO11FL 11779303 YP_005276167.1 CDS EKO11_0445 NC_016902.1 458905 459414 R KEGG: sdy:SDY_3463 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase; peptide deformylase complement(458905..459414) Escherichia coli KO11FL 11775453 YP_005276168.1 CDS EKO11_0446 NC_016902.1 459544 460668 D KEGG: eoj:ECO26_4387 DNA protecting protein DprA; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; DNA protecting protein DprA 459544..460668 Escherichia coli KO11FL 11775454 YP_005276169.1 CDS EKO11_0447 NC_016902.1 460640 461113 D PFAM: protein of unknown function DUF494; KEGG: eoh:ECO103_4016 hypothetical protein; hypothetical protein 460640..461113 Escherichia coli KO11FL 11779304 YP_005276170.1 CDS EKO11_0448 NC_016902.1 461142 461684 D PFAM: DNA topoisomerase type IA zn finger domain protein; KEGG: sdy:SDY_3460 putative DNA topoisomerase; DNA topoisomerase type IA zn finger domain-containing protein 461142..461684 Escherichia coli KO11FL 11775455 YP_005276171.1 CDS EKO11_0449 NC_016902.1 461689 462261 D PFAM: SUA5/yciO/yrdC domain; KEGG: sbc:SbBS512_E3667 putative ribosome maturation factor; SUA5/yciO/yrdC domain-containing protein 461689..462261 Escherichia coli KO11FL 11775456 YP_005276172.1 CDS EKO11_0450 NC_016902.1 462266 463084 D KEGG: eoi:ECO111_4101 shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; shikimate 5-dehydrogenase 462266..463084 Escherichia coli KO11FL 11775457 YP_005276173.1 CDS EKO11_0451 NC_016902.1 463081 463338 D PFAM: protein of unknown function DUF1488; KEGG: sbc:SbBS512_E3664 hypothetical protein; hypothetical protein 463081..463338 Escherichia coli KO11FL 11775458 YP_005276174.1 CDS EKO11_0452 NC_016902.1 463314 464195 R manually curated; KEGG: eok:G2583_3998 hypothetical protein; hypothetical protein complement(463314..464195) Escherichia coli KO11FL 11775459 YP_005276175.1 CDS EKO11_0453 NC_016902.1 469919 470677 R KEGG: eoh:ECO103_4010 putative ATP-binding component of a transport system; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(469919..470677) Escherichia coli KO11FL 11775467 YP_005276176.1 CDS EKO11_0454 NC_016902.1 470685 471788 R KEGG: eoh:ECO103_4009 putative transport system permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit complement(470685..471788) Escherichia coli KO11FL 11775468 YP_005276177.1 CDS EKO11_0455 NC_016902.1 471798 472979 R KEGG: eoh:ECO103_4008 putative transport system permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit complement(471798..472979) Escherichia coli KO11FL 11779305 YP_005276178.1 CDS EKO11_0456 NC_016902.1 473047 474072 R KEGG: eok:G2583_3987 putative amino-acid ABC transporter-binding protein YhdW precursor; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein complement(473047..474072) Escherichia coli KO11FL 11775469 YP_005276179.1 CDS EKO11_0457 NC_016902.1 474503 474724 R KEGG: ebd:ECBD_0478 hypothetical protein; hypothetical protein complement(474503..474724) Escherichia coli KO11FL 11779306 YP_005276180.1 CDS EKO11_0459 NC_016902.1 474977 478081 R KEGG: eoh:ECO103_4005 multidrug efflux system protein; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(474977..478081) Escherichia coli KO11FL 11775471 YP_005276181.1 CDS EKO11_0460 NC_016902.1 478093 479250 R KEGG: eoh:ECO103_4004 cytoplasmic membrane lipoprotein AcrE; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(478093..479250) Escherichia coli KO11FL 11779307 YP_005276182.1 CDS EKO11_0461 NC_016902.1 479649 480311 D PFAM: Tetracycline transcriptional repressor MAATS-type domain-containing protein; regulatory protein TetR; KEGG: sbc:SbBS512_E3647 DNA-binding transcriptional regulator EnvR; TetR family transcriptional regulator 479649..480311 Escherichia coli KO11FL 11779308 YP_005276183.1 CDS EKO11_0462 NC_016902.1 480314 480493 R KEGG: ebd:ECBD_0482 hypothetical protein; hypothetical protein complement(480314..480493) Escherichia coli KO11FL 11775472 YP_005276184.1 CDS EKO11_0463 NC_016902.1 480577 481461 R PFAM: DNA methylase N-4/N-6 domain protein; KEGG: eoh:ECO103_4001 putative methyltransferase; DNA methylase N-4/N-6 domain-containing protein complement(480577..481461) Escherichia coli KO11FL 11775473 YP_005276185.1 CDS EKO11_0464 NC_016902.1 481547 481843 R PFAM: helix-turn-helix Fis-type; KEGG: etr:ETAE_3152 DNA-binding protein fis; Fis family transcriptional regulator complement(481547..481843) Escherichia coli KO11FL 11779309 YP_005276186.1 CDS EKO11_0465 NC_016902.1 481869 482834 R manually curated; TIGRFAM: TIM-barrel protein, nifR3 family; KEGG: sdy:SDY_3437 tRNA-dihydrouridine synthase B; PFAM: dihydrouridine synthase DuS; nifR3 family TIM-barrel protein complement(481869..482834) Escherichia coli KO11FL 11775474 YP_005276187.1 CDS EKO11_0466 NC_016902.1 483163 484044 R KEGG: sdy:SDY_3436 ribosomal protein L11 methyltransferase; TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: ribosomal L11 methyltransferase; 50S ribosomal protein L11 methyltransferase complement(483163..484044) Escherichia coli KO11FL 11775475 YP_005276188.1 CDS EKO11_0467 NC_016902.1 484056 485507 R KEGG: ssn:SSON_3399 sodium/panthothenate symporter; TIGRFAM: sodium/pantothenate symporter; SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; sodium/pantothenate symporter complement(484056..485507) Escherichia coli KO11FL 11775476 YP_005276189.1 CDS EKO11_0468 NC_016902.1 485497 485739 R PFAM: protein of unknown function DUF997; KEGG: sdy:SDY_3434 hypothetical protein; hypothetical protein complement(485497..485739) Escherichia coli KO11FL 11775477 YP_005276190.1 CDS EKO11_0469 NC_016902.1 485848 487197 R KEGG: efe:EFER_3235 acetyl-CoA carboxylase biotin carboxylase subunit; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; acetyl-CoA carboxylase, biotin carboxylase complement(485848..487197) Escherichia coli KO11FL 11775478 YP_005276191.1 CDS EKO11_0470 NC_016902.1 487208 487678 R KEGG: sbc:SbBS512_E3287 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; acetyl-CoA carboxylase, biotin carboxyl carrier protein complement(487208..487678) Escherichia coli KO11FL 11775479 YP_005276192.1 CDS EKO11_0472 NC_016902.1 488656 489630 R KEGG: ssn:SSON_3394 putative dehydrogenase; TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; YhdH/YhfP family quinone oxidoreductase complement(488656..489630) Escherichia coli KO11FL 11775481 YP_005276193.1 CDS EKO11_0473 NC_016902.1 489782 491722 D TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: eoh:ECO103_3992 regulatory protein CsrD; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase 489782..491722 Escherichia coli KO11FL 11775482 YP_005276194.1 CDS EKO11_0474 NC_016902.1 492027 493070 D KEGG: cro:ROD_45651 rod shape-determining protein; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl; MreB/Mrl family cell shape determining protein 492027..493070 Escherichia coli KO11FL 11775483 YP_005276195.1 CDS EKO11_0475 NC_016902.1 493136 494239 D KEGG: sdy:SDY_3425 rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; rod shape-determining protein MreC 493136..494239 Escherichia coli KO11FL 11775484 YP_005276196.1 CDS EKO11_0476 NC_016902.1 494239 494727 D KEGG: sbc:SbBS512_E3280 rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD; PFAM: Rod shape-determining protein MreD; rod shape-determining protein MreD 494239..494727 Escherichia coli KO11FL 11775485 YP_005276197.1 CDS EKO11_0477 NC_016902.1 494736 495329 D KEGG: ssn:SSON_3389 Maf-like protein; TIGRFAM: maf protein; PFAM: Maf family protein; maf protein 494736..495329 Escherichia coli KO11FL 11775486 YP_005276198.1 CDS EKO11_0478 NC_016902.1 495319 496788 D KEGG: sdy:SDY_3422 ribonuclease G; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein; ribonuclease, Rne/Rng family 495319..496788 Escherichia coli KO11FL 11775487 YP_005276199.1 CDS EKO11_0479 NC_016902.1 496856 500656 D KEGG: ebw:BWG_2946 hypothetical protein; hypothetical protein 496856..500656 Escherichia coli KO11FL 11775488 YP_005276200.1 CDS EKO11_0480 NC_016902.1 501086 502531 D PFAM: peptidase U62 modulator of DNA gyrase; KEGG: sfv:SFV_3271 protease TldD; peptidase U62 modulator of DNA gyrase 501086..502531 Escherichia coli KO11FL 11775489 YP_005276201.1 CDS EKO11_0481 NC_016902.1 502665 503594 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sbo:SBO_3144 putative DNA-binding transcriptional regulator; LysR family transcriptional regulator complement(502665..503594) Escherichia coli KO11FL 11779310 YP_005276202.1 CDS EKO11_0482 NC_016902.1 503708 503980 D KEGG: eok:G2583_3962 hypothetical protein; manually curated; PFAM: protein of unknown function DUF1656; hypothetical protein 503708..503980 Escherichia coli KO11FL 11775490 YP_005276203.1 CDS EKO11_0483 NC_016902.1 503988 504920 D KEGG: sdy:SDY_3417 p-hydroxybenzoic acid efflux subunit AaeA; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 503988..504920 Escherichia coli KO11FL 11775491 YP_005276204.1 CDS EKO11_0484 NC_016902.1 504926 506893 D PFAM: Fusaric acid resistance protein conserved region; KEGG: sfv:SFV_3267 p-hydroxybenzoic acid efflux subunit AaeB; fusaric acid resistance protein 504926..506893 Escherichia coli KO11FL 11779311 YP_005276205.1 CDS EKO11_0485 NC_016902.1 506985 507257 D PFAM: Barstar (barnase inhibitor); KEGG: sbc:SbBS512_E3537 hypothetical protein; barnase inhibitor 506985..507257 Escherichia coli KO11FL 11775492 YP_005276206.1 CDS EKO11_0486 NC_016902.1 507313 507576 R PFAM: protein of unknown function DUF1471; KEGG: sbc:SbBS512_E3538 protein YcfR; hypothetical protein complement(507313..507576) Escherichia coli KO11FL 11775493 YP_005276207.1 CDS EKO11_0487 NC_016902.1 507941 508411 R KEGG: sdy:SDY_3413 arginine repressor; TIGRFAM: arginine repressor; PFAM: Arginine repressor-like; arginine repressor ArgR complement(507941..508411) Escherichia coli KO11FL 11775494 YP_005276208.1 CDS EKO11_0488 NC_016902.1 508846 509784 D KEGG: eoi:ECO111_4056 malate dehydrogenase; TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: Lactate/malate dehydrogenase; malate dehydrogenase 508846..509784 Escherichia coli KO11FL 11775495 YP_005276209.1 CDS EKO11_0489 NC_016902.1 509847 510914 R SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: periplasmic serine protease DegS; KEGG: sdy:SDY_3411 serine endoprotease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; periplasmic serine protease DegS complement(509847..510914) Escherichia coli KO11FL 11775496 YP_005276210.1 CDS EKO11_0490 NC_016902.1 511004 512371 R SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: sbc:SbBS512_E3542 serine endoprotease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do complement(511004..512371) Escherichia coli KO11FL 11775497 YP_005276211.1 CDS EKO11_0491 NC_016902.1 512525 512923 R PFAM: protein of unknown function DUF1043; KEGG: sbc:SbBS512_E3543 cytochrome d ubiquinol oxidase subunit III; hypothetical protein complement(512525..512923) Escherichia coli KO11FL 11775498 YP_005276212.1 CDS EKO11_0492 NC_016902.1 513117 514244 D PFAM: AFG1-family ATPase; KEGG: eoh:ECO103_3973 hypothetical protein; AFG1 family ATPase 513117..514244 Escherichia coli KO11FL 11775499 YP_005276213.1 CDS EKO11_0493 NC_016902.1 514463 514891 D KEGG: sfv:SFV_3258 50S ribosomal protein L13; TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13; 50S ribosomal protein L13 514463..514891 Escherichia coli KO11FL 11775500 YP_005276214.1 CDS EKO11_0494 NC_016902.1 514907 515299 D PFAM: ribosomal protein S9; KEGG: cro:ROD_45931 30S ribosomal subunit protein S9; 30S ribosomal protein S9 514907..515299 Escherichia coli KO11FL 11775501 YP_005276215.1 CDS EKO11_0495 NC_016902.1 515694 516332 D PFAM: Glutathione S-transferase domain; KEGG: sbc:SbBS512_E3547 stringent starvation protein A; glutathione S-transferase 515694..516332 Escherichia coli KO11FL 11775502 YP_005276216.1 CDS EKO11_0496 NC_016902.1 516338 516835 D PFAM: Stringent starvation protein B; KEGG: sbo:SBO_3161 ClpXP protease specificity-enhancing factor; stringent starvation protein B 516338..516835 Escherichia coli KO11FL 11775503 YP_005276217.1 CDS EKO11_0497 NC_016902.1 516878 518245 R KEGG: eoh:ECO103_3968 putative cryptic C4-dicarboxylate transporter DcuD; TIGRFAM: anaerobic c4-dicarboxylate antiporter, DcuC family; PFAM: C4-dicarboxylate anaerobic carrier-like; anaerobic c4-dicarboxylate antiporter complement(516878..518245) Escherichia coli KO11FL 11775504 YP_005276218.1 CDS EKO11_0498 NC_016902.1 518625 519416 D KEGG: ebd:ECBD_0521 transcriptional regulator NanR; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 518625..519416 Escherichia coli KO11FL 11775505 YP_005276219.1 CDS EKO11_0499 NC_016902.1 519538 520431 D KEGG: sdy:SDY_3400 N-acetylneuraminate lyase; TIGRFAM: N-acetylneuraminate lyase; PFAM: dihydrodipicolinate synthetase; N-acetylneuraminate lyase 519538..520431 Escherichia coli KO11FL 11775506 YP_005276220.1 CDS EKO11_0500 NC_016902.1 520540 522030 D KEGG: sbc:SbBS512_E3552 putative sialic acid transporter; TIGRFAM: sialic acid transporter; PFAM: major facilitator superfamily MFS_1; sialic acid transporter 520540..522030 Escherichia coli KO11FL 11775507 YP_005276221.1 CDS EKO11_0501 NC_016902.1 522078 522767 D KEGG: sbc:SbBS512_E3553 N-acetylmannosamine-6-phosphate 2-epimerase; PFAM: N-acetylmannosamine-6-phosphate epimerase; N-acylglucosamine-6-phosphate 2-epimerase 522078..522767 Escherichia coli KO11FL 11775508 YP_005276222.1 CDS EKO11_0502 NC_016902.1 522764 523639 D PFAM: ROK family protein; KEGG: ebd:ECBD_0525 N-acetylmannosamine kinase; ROK family protein 522764..523639 Escherichia coli KO11FL 11779312 YP_005276223.1 CDS EKO11_0503 NC_016902.1 523636 524100 D PFAM: Conserved hypothetical protein CHP00022; KEGG: sfv:SFV_3246 hypothetical protein; hypothetical protein 523636..524100 Escherichia coli KO11FL 11775509 YP_005276224.1 CDS EKO11_0504 NC_016902.1 524160 525287 R PFAM: protein of unknown function DUF1016; KEGG: eoh:ECO103_3961 hypothetical protein; hypothetical protein complement(524160..525287) Escherichia coli KO11FL 11775510 YP_005276225.1 CDS EKO11_0505 NC_016902.1 525471 526889 R KEGG: sbc:SbBS512_E3557 glutamate synthase subunit beta; TIGRFAM: glutamate synthase, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutamate synthase, small subunit complement(525471..526889) Escherichia coli KO11FL 11779313 YP_005276226.1 CDS EKO11_0506 NC_016902.1 526902 531455 R KEGG: eoh:ECO103_3959 glutamate synthase subunit alpha; PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase (ferredoxin) complement(526902..531455) Escherichia coli KO11FL 11775511 YP_005276227.1 CDS EKO11_0507 NC_016902.1 532037 532966 D TIGRFAM: conserved hypothetical protein; PFAM: Radical SAM domain protein; KEGG: eoh:ECO103_3958 putative Fe-S oxidoreductase; SMART: Elongator protein 3/MiaB/NifB; hypothetical protein 532037..532966 Escherichia coli KO11FL 11775512 YP_005276228.1 CDS EKO11_0508 NC_016902.1 533062 535398 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; response regulator receiver; Hpt domain protein; KEGG: sbo:SBO_3172 aerobic respiration control sensor protein ArcB; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver; Hpt domain protein; multi-sensor hybrid histidine kinase 533062..535398 Escherichia coli KO11FL 11779314 YP_005276229.1 CDS EKO11_0509 NC_016902.1 535628 536281 D PFAM: ThiJ/PfpI domain-containing protein; KEGG: sbc:SbBS512_E3561 isoprenoid biosynthesis protein with amidotransferase-like domain; ThiJ/PfpI domain-containing protein 535628..536281 Escherichia coli KO11FL 11775513 YP_005276230.1 CDS EKO11_0510 NC_016902.1 536278 537006 D KEGG: ebd:ECBD_0534 monofunctional biosynthetic peptidoglycan transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51; monofunctional biosynthetic peptidoglycan transglycosylase 536278..537006 Escherichia coli KO11FL 11775514 YP_005276231.1 CDS EKO11_0511 NC_016902.1 537003 537635 R PFAM: PhoP regulatory network protein YrbL; KEGG: sfx:S3465 hypothetical protein; PhoP regulatory network protein YrbL complement(537003..537635) Escherichia coli KO11FL 11775515 YP_005276232.1 CDS EKO11_0512 NC_016902.1 537849 538121 R KEGG: sdy:SDY_3387 phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr); TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; phosphotransferase system, phosphocarrier protein HPr complement(537849..538121) Escherichia coli KO11FL 11775516 YP_005276233.1 CDS EKO11_0513 NC_016902.1 538118 538972 R KEGG: sbc:SbBS512_E3565 hypothetical protein; hypothetical protein complement(538118..538972) Escherichia coli KO11FL 11775517 YP_005276234.1 CDS EKO11_0514 NC_016902.1 539018 539509 R KEGG: sbc:SbBS512_E3566 PTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN; TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN complement(539018..539509) Escherichia coli KO11FL 11775518 YP_005276235.1 CDS EKO11_0515 NC_016902.1 539627 539914 R KEGG: sdy:SDY_3384 putative sigma(54) modulation protein; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; sigma 54 modulation protein/ribosomal protein S30EA complement(539627..539914) Escherichia coli KO11FL 11775519 YP_005276236.1 CDS EKO11_0516 NC_016902.1 539937 541370 R KEGG: sbc:SbBS512_E3568 RNA polymerase factor sigma-54; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor core-binding region; sigma-54 factor; sigma-54 DNA-binding domain protein; RNA polymerase sigma 54 subunit RpoN complement(539937..541370) Escherichia coli KO11FL 11775520 YP_005276237.1 CDS EKO11_0517 NC_016902.1 541418 542143 R KEGG: sdy:SDY_3382 putative ABC transporter ATP-binding protein YhbG; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(541418..542143) Escherichia coli KO11FL 11775521 YP_005276238.1 CDS EKO11_0518 NC_016902.1 542150 542707 R KEGG: sdy:SDY_3381 lipopolysaccharide transport periplasmic protein LptA; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein; lipopolysaccharide transport periplasmic protein LptA complement(542150..542707) Escherichia coli KO11FL 11775522 YP_005276239.1 CDS EKO11_0519 NC_016902.1 542676 543251 R PFAM: protein of unknown function DUF1239; KEGG: sdy:SDY_3380 hypothetical protein; hypothetical protein complement(542676..543251) Escherichia coli KO11FL 11775523 YP_005276240.1 CDS EKO11_0520 NC_016902.1 543248 543814 R TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: sfv:SFV_3228 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase complement(543248..543814) Escherichia coli KO11FL 11775524 YP_005276241.1 CDS EKO11_0521 NC_016902.1 543835 544821 R TIGRFAM: KpsF/GutQ family protein; KEGG: sbc:SbBS512_E3573 D-arabinose 5-phosphate isomerase; PFAM: sugar isomerase (SIS); CBS domain containing protein; KpsF/GutQ family protein complement(543835..544821) Escherichia coli KO11FL 11775525 YP_005276242.1 CDS EKO11_0522 NC_016902.1 544835 545812 R KEGG: sbo:SBO_3186 putative calcium/sodium:proton antiporter; TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; CaCA family Na+/Ca+ antiporter complement(544835..545812) Escherichia coli KO11FL 11775526 YP_005276243.1 CDS EKO11_0523 NC_016902.1 546022 546831 D KEGG: sdy:SDY_3376 putative ABC transporter ATP-binding protein YrbF; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 546022..546831 Escherichia coli KO11FL 11775527 YP_005276244.1 CDS EKO11_0524 NC_016902.1 546839 547621 D PFAM: protein of unknown function DUF140; KEGG: sbc:SbBS512_E3576 toluene ABC transporter, permease protein; hypothetical protein 546839..547621 Escherichia coli KO11FL 11775528 YP_005276245.1 CDS EKO11_0525 NC_016902.1 547626 548177 D PFAM: Mammalian cell entry related domain protein; KEGG: sbc:SbBS512_E3577 Mce family protein; Mammalian cell entry related domain-containing protein 547626..548177 Escherichia coli KO11FL 11775529 YP_005276246.1 CDS EKO11_0526 NC_016902.1 548196 548831 D PFAM: toluene tolerance family protein; KEGG: sbc:SbBS512_E3578 toluene tolerance protein Ttg2D; toluene tolerance family protein 548196..548831 Escherichia coli KO11FL 11775530 YP_005276247.1 CDS EKO11_0527 NC_016902.1 548831 549124 D KEGG: sdy:SDY_3372 hypothetical protein; hypothetical protein 548831..549124 Escherichia coli KO11FL 11775531 YP_005276248.1 CDS EKO11_0528 NC_016902.1 549269 549538 D PFAM: BolA family protein; KEGG: sdy:SDY_3371 hypothetical protein; BolA family protein 549269..549538 Escherichia coli KO11FL 11775532 YP_005276249.1 CDS EKO11_0529 NC_016902.1 549593 550852 D KEGG: ssn:SSON_3337 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); UDP-N-acetylglucosamine 1-carboxyvinyltransferase 549593..550852 Escherichia coli KO11FL 11775533 YP_005276250.1 CDS EKO11_0530 NC_016902.1 550900 551178 R KEGG: ssn:SSON_3336 DNA-binding transcriptional regulator Nlp; putative transcriptional regulator, Nlp complement(550900..551178) Escherichia coli KO11FL 11775534 YP_005276251.1 CDS EKO11_0531 NC_016902.1 551406 552377 R PFAM: Polyprenyl synthetase; KEGG: sbo:SBO_3195 octaprenyl diphosphate synthase; polyprenyl synthetase complement(551406..552377) Escherichia coli KO11FL 11775535 YP_005276252.1 CDS EKO11_0532 NC_016902.1 552636 552947 D KEGG: cro:ROD_46342 50S ribosomal subunit protein L21; TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; 50S ribosomal protein L21 552636..552947 Escherichia coli KO11FL 11775536 YP_005276253.1 CDS EKO11_0533 NC_016902.1 552968 553225 D KEGG: sdy:SDY_3366 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; 50S ribosomal protein L27 552968..553225 Escherichia coli KO11FL 11775537 YP_005276254.1 CDS EKO11_0534 NC_016902.1 553352 554317 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: sbo:SBO_3198 hypothetical protein; hypothetical protein 553352..554317 Escherichia coli KO11FL 11775538 YP_005276255.1 CDS EKO11_0535 NC_016902.1 554333 555505 D KEGG: sbc:SbBS512_E3587 GTPase ObgE; TIGRFAM: GTP-binding protein Obg/CgtA; small GTP-binding protein; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related; GTP-binding protein Obg/CgtA 554333..555505 Escherichia coli KO11FL 11775539 YP_005276256.1 CDS EKO11_0536 NC_016902.1 555545 556978 R TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; KEGG: sbc:SbBS512_E3588 D-alanyl-D-alanine carboxypeptidase/endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase complement(555545..556978) Escherichia coli KO11FL 11775540 YP_005276257.1 CDS EKO11_0537 NC_016902.1 557226 557702 D KEGG: sdy:SDY_3362 transcription elongation factor GreA; TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain-containing protein; transcription elongation factor GreA 557226..557702 Escherichia coli KO11FL 11775541 YP_005276258.1 CDS EKO11_0538 NC_016902.1 557858 558151 R PFAM: protein of unknown function UPF0044; KEGG: sbc:SbBS512_E3590 RNA-binding protein YhbY; hypothetical protein complement(557858..558151) Escherichia coli KO11FL 11775542 YP_005276259.1 CDS EKO11_0539 NC_016902.1 558277 558906 D KEGG: cko:CKO_04580 23S rRNA methyltransferase J; TIGRFAM: ribosomal RNA large subunit methyltransferase J; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; ribosomal RNA large subunit methyltransferase J 558277..558906 Escherichia coli KO11FL 11775543 YP_005276260.1 CDS EKO11_0540 NC_016902.1 558997 560940 D SMART: AAA ATPase; TIGRFAM: ATP-dependent metalloprotease FtsH; KEGG: ebd:ECBD_0564 ATP-dependent metalloprotease; PFAM: peptidase M41; AAA ATPase central domain protein; ATP-dependent metalloprotease FtsH 558997..560940 Escherichia coli KO11FL 11775544 YP_005276261.1 CDS EKO11_0541 NC_016902.1 561030 561878 D TIGRFAM: dihydropteroate synthase; KEGG: ssn:SSON_3325 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS; dihydropteroate synthase 561030..561878 Escherichia coli KO11FL 11775545 YP_005276262.1 CDS EKO11_0542 NC_016902.1 561871 563208 D KEGG: sbc:SbBS512_E3594 phosphoglucosamine mutase; TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucosamine mutase 561871..563208 Escherichia coli KO11FL 11775546 YP_005276263.1 CDS EKO11_0543 NC_016902.1 563388 563768 D manually curated; TIGRFAM: preprotein translocase, SecG subunit; KEGG: cro:ROD_46581 protein-export membrane protein; PFAM: Preprotein translocase SecG subunit; preprotein translocase subunit SecG 563388..563768 Escherichia coli KO11FL 11775547 YP_005276264.1 CDS EKO11_0544 NC_016902.1 564328 565953 D PFAM: sulfatase; KEGG: ebd:ECBD_0568 sulfatase; sulfatase 564328..565953 Escherichia coli KO11FL 11779315 YP_005276265.1 CDS EKO11_0545 NC_016902.1 565961 567304 R TIGRFAM: argininosuccinate synthase; KEGG: eoi:ECO111_3995 argininosuccinate synthase; PFAM: argininosuccinate synthase; argininosuccinate synthase complement(565961..567304) Escherichia coli KO11FL 11775549 YP_005276266.1 CDS EKO11_0546 NC_016902.1 567923 568387 D KEGG: eok:G2583_3895 hypothetical protein; manually curated; PFAM: protein of unknown function DUF150; hypothetical protein 567923..568387 Escherichia coli KO11FL 11779316 YP_005276267.1 CDS EKO11_0547 NC_016902.1 568415 569902 D KEGG: ssn:SSON_3315 transcription elongation factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: NusA domain-containing protein; RNA binding S1 domain protein; NusA antitermination factor 568415..569902 Escherichia coli KO11FL 11775551 YP_005276268.1 CDS EKO11_0548 NC_016902.1 569927 572599 D KEGG: ebd:ECBD_0572 translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; Initiation factor 2 associated domain protein ; translation initiation factor IF-2 domain-containing protein; elongation factor Tu domain 2 protein; translation initiation factor IF-2 569927..572599 Escherichia coli KO11FL 11775552 YP_005276269.1 CDS EKO11_0549 NC_016902.1 572763 573164 D KEGG: sdy:SDY_3346 ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A; ribosome-binding factor A 572763..573164 Escherichia coli KO11FL 11779317 YP_005276270.1 CDS EKO11_0550 NC_016902.1 573164 574108 D KEGG: ssn:SSON_3312 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B; tRNA pseudouridine synthase B 573164..574108 Escherichia coli KO11FL 11775553 YP_005276271.1 CDS EKO11_0551 NC_016902.1 574257 574526 D KEGG: sdy:SDY_3344 30S ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15; 30S ribosomal protein S15 574257..574526 Escherichia coli KO11FL 11775554 YP_005276272.1 CDS EKO11_0552 NC_016902.1 574773 576908 D SMART: KH domain protein; TIGRFAM: polyribonucleotide nucleotidyltransferase; KEGG: ssn:SSON_3310 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding; K Homology, type 1, subgroup; RNA binding S1 domain protein; polyribonucleotide nucleotidyltransferase 574773..576908 Escherichia coli KO11FL 11779318 YP_005276273.1 CDS EKO11_0553 NC_016902.1 577017 577901 D KEGG: ssn:SSON_3309 lipoprotein NlpI; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; hypothetical protein 577017..577901 Escherichia coli KO11FL 11775555 YP_005276274.1 CDS EKO11_0554 NC_016902.1 578081 579970 D KEGG: eoi:ECO111_3986 ATP-dependent RNA helicase DeaD; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein; DEAD/DEAH box helicase 578081..579970 Escherichia coli KO11FL 11775556 YP_005276275.1 CDS EKO11_0555 NC_016902.1 580124 581368 D KEGG: ssn:SSON_3307 tryptophan permease; TIGRFAM: aromatic amino acid transporter; PFAM: Tryptophan/tyrosine permease; aromatic amino acid transporter 580124..581368 Escherichia coli KO11FL 11779319 YP_005276276.1 CDS EKO11_0556 NC_016902.1 581486 582493 R KEGG: sbo:SBO_3222 hypothetical protein; TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup; luciferase family oxidoreductase complement(581486..582493) Escherichia coli KO11FL 11775557 YP_005276277.1 CDS EKO11_0558 NC_016902.1 582699 583577 R PFAM: peptidase U32; KEGG: eok:G2583_3883 hypothetical protein; peptidase U32 complement(582699..583577) Escherichia coli KO11FL 11775559 YP_005276278.1 CDS EKO11_0559 NC_016902.1 583586 584581 R PFAM: peptidase U32; KEGG: eoh:ECO103_3907 putative peptidase; peptidase U32 complement(583586..584581) Escherichia coli KO11FL 11775560 YP_005276279.1 CDS EKO11_0560 NC_016902.1 584790 585314 D PFAM: Sterol-binding domain protein; KEGG: sdy:SDY_3336 hypothetical protein; Sterol-binding domain-containing protein 584790..585314 Escherichia coli KO11FL 11775561 YP_005276280.1 CDS EKO11_0561 NC_016902.1 585308 585811 D PFAM: GCN5-related N-acetyltransferase; KEGG: sdy:SDY_3335 hypothetical protein; N-acetyltransferase GCN5 585308..585811 Escherichia coli KO11FL 11775562 YP_005276281.1 CDS EKO11_0562 NC_016902.1 585798 586100 R KEGG: sdy:SDY_3334 GIY-YIG nuclease superfamily protein; PFAM: Excinuclease ABC C subunit domain protein; SMART: Excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain-containing protein complement(585798..586100) Escherichia coli KO11FL 11775563 YP_005276282.1 CDS EKO11_0563 NC_016902.1 586151 586594 D KEGG: sfv:SFV_3184 hypothetical protein; hypothetical protein 586151..586594 Escherichia coli KO11FL 11775564 YP_005276283.1 CDS EKO11_0564 NC_016902.1 586574 587092 R KEGG: sdy:SDY_3332 hypothetical protein; TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain-containing protein; Pfpi family intracellular protease complement(586574..587092) Escherichia coli KO11FL 11779320 YP_005276284.1 CDS EKO11_0565 NC_016902.1 587220 587855 D PFAM: Semialdehyde dehydrogenase NAD - binding; KEGG: eoh:ECO103_3901 putative nucleoside-diphosphate-sugar epimerase; semialdehyde dehydrogenase NAD-binding protein 587220..587855 Escherichia coli KO11FL 11775565 YP_005276285.1 CDS EKO11_0566 NC_016902.1 587928 588968 D PFAM: permease; KEGG: eoh:ECO103_3900 putative permease; permease 587928..588968 Escherichia coli KO11FL 11775566 YP_005276286.1 CDS EKO11_0567 NC_016902.1 589082 589657 R KEGG: ebd:ECBD_0590 hypothetical protein; PFAM: transport-associated; SMART: Transport-associated and nodulation region; transport-associated protein complement(589082..589657) Escherichia coli KO11FL 11775567 YP_005276287.1 CDS EKO11_0568 NC_016902.1 589667 590257 R PFAM: sugar isomerase (SIS); KEGG: efe:EFER_4346 DnaA initiator-associating protein DiaA; sugar isomerase (SIS) complement(589667..590257) Escherichia coli KO11FL 11775568 YP_005276288.1 CDS EKO11_0569 NC_016902.1 590277 590672 R PFAM: Uncharacterised protein family UPF0102; KEGG: ssn:SSON_3294 hypothetical protein; hypothetical protein complement(590277..590672) Escherichia coli KO11FL 11775569 YP_005276289.1 CDS EKO11_0570 NC_016902.1 590630 592666 R KEGG: eoi:ECO111_3971 hypothetical protein; hypothetical protein complement(590630..592666) Escherichia coli KO11FL 11775570 YP_005276290.1 CDS EKO11_0571 NC_016902.1 592730 593590 D PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: eoh:ECO103_3895 putative methyltransferase; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 592730..593590 Escherichia coli KO11FL 11775571 YP_005276291.1 CDS EKO11_0572 NC_016902.1 593633 594724 R KEGG: eoj:ECO26_4250 putative fimbrial-like adhesin protein; putative fimbrial-like adhesin protein complement(593633..594724) Escherichia coli KO11FL 11775572 YP_005276292.1 CDS EKO11_0573 NC_016902.1 594735 597251 R PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: eoi:ECO111_3968 putative outer membrane protein; fimbrial biogenesis outer membrane usher protein complement(594735..597251) Escherichia coli KO11FL 11775573 YP_005276293.1 CDS EKO11_0574 NC_016902.1 597281 597976 R PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: eoh:ECO103_3890 putative periplasmic pilin chaperone; Pili assembly chaperone, N-terminal protein complement(597281..597976) Escherichia coli KO11FL 11775574 YP_005276294.1 CDS EKO11_0575 NC_016902.1 598056 598640 R PFAM: Fimbrial protein domain-containing protein; KEGG: eoh:ECO103_3889 putative fimbrial-like adhesin protein; fimbrial protein domain-containing protein complement(598056..598640) Escherichia coli KO11FL 11775575 YP_005276295.1 CDS EKO11_0576 NC_016902.1 599040 599741 R KEGG: sfx:S3393 galactosamine-6-phosphate isomerase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; glucosamine-6-phosphate deaminase complement(599040..599741) Escherichia coli KO11FL 11775576 YP_005276296.1 CDS EKO11_0577 NC_016902.1 599796 600587 R KEGG: sfx:S3392 PTS system N-acetylgalactosamine-specific transporter subunit IID; TIGRFAM: PTS system, mannose/fructose/sorbose family, IID subunit; PFAM: PTS system mannose/fructose/sorbose family IID component; PTS system mannose/fructose/sorbose family transporter subunit IID complement(599796..600587) Escherichia coli KO11FL 11775577 YP_005276297.1 CDS EKO11_0578 NC_016902.1 600577 601380 R KEGG: ebd:ECBD_0601 PTS system N-acetylgalactosamine-specific transporter subunit IIC; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIC subunit; PFAM: phosphotransferase system PTS sorbose-specific IIC subunit; PTS system mannose/fructose/sorbose family transporter subunit IIC complement(600577..601380) Escherichia coli KO11FL 11775578 YP_005276298.1 CDS EKO11_0579 NC_016902.1 601419 601895 R TIGRFAM: PTS system, mannose/fructose/sorbose family, IIB subunit; KEGG: ebd:ECBD_0602 PTS system N-acetylgalactosamine-specific transporter subunit IIB; PFAM: PTS system sorbose subfamily IIB component; PTS system mannose/fructose/sorbose family transporter subunit IIB complement(601419..601895) Escherichia coli KO11FL 11775579 YP_005276299.1 CDS EKO11_0580 NC_016902.1 602062 602922 R TIGRFAM: class II aldolase, tagatose bisphosphate family; ketose-bisphosphate aldolase; KEGG: ebd:ECBD_0603 tagatose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II; tagatose bisphosphate family class II aldolase complement(602062..602922) Escherichia coli KO11FL 11775580 YP_005276300.1 CDS EKO11_0581 NC_016902.1 602935 604089 R KEGG: ebw:BWG_2840 tagatose-6-phosphate ketose/aldose isomerase; TIGRFAM: sugar isomerase, AgaS family; PFAM: sugar isomerase (SIS); sugar isomerase complement(602935..604089) Escherichia coli KO11FL 11775581 YP_005276301.1 CDS EKO11_0582 NC_016902.1 604439 605572 R TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: eoi:ECO111_3959 N-acetylgalactosamine-6-phosphate deacetylase; PFAM: amidohydrolase; N-acetylglucosamine-6-phosphate deacetylase complement(604439..605572) Escherichia coli KO11FL 11775582 YP_005276302.1 CDS EKO11_0583 NC_016902.1 605569 606003 R PFAM: PTS system fructose subfamily IIA component; KEGG: ebd:ECBD_0606 PTS system fructose subfamily IIA component; PTS system fructose subfamily transporter subunit IIA complement(605569..606003) Escherichia coli KO11FL 11779321 YP_005276303.1 CDS EKO11_0584 NC_016902.1 606021 606899 R PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: efe:EFER_4358 putative hexose/hexosamine family PTS permease IID component; PTS system mannose/fructose/sorbose family transporter subunit IID complement(606021..606899) Escherichia coli KO11FL 11775583 YP_005276304.1 CDS EKO11_0585 NC_016902.1 606889 607668 R PFAM: phosphotransferase system PTS sorbose-specific IIC subunit; KEGG: efe:EFER_4359 putative enzyme IIC component of PTS; PTS sorbose-specific transporter subunit IIC complement(606889..607668) Escherichia coli KO11FL 11779322 YP_005276305.1 CDS EKO11_0586 NC_016902.1 607679 608152 R TIGRFAM: PTS system, mannose/fructose/sorbose family, IIB subunit; KEGG: sfx:S3383 PTS system N-acetylgalactosamine-specific transporter subunit IIB; PFAM: PTS system sorbose subfamily IIB component; PTS system mannose/fructose/sorbose family transporter subunit IIB complement(607679..608152) Escherichia coli KO11FL 11779323 YP_005276306.1 CDS EKO11_0587 NC_016902.1 608175 609455 R KEGG: eoi:ECO111_3954 tagatose 6-phosphate aldolase 1, KbaZ subunit; TIGRFAM: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit; PFAM: D-tagatose-bisphosphate aldolase class II accessory protein AgaZ; D-tagatose-bisphosphate aldolase non-catalytic subunit complement(608175..609455) Escherichia coli KO11FL 11775584 YP_005276307.1 CDS EKO11_0588 NC_016902.1 609704 610513 D KEGG: efe:EFER_4362 DNA-binding transcriptional regulator AgaR; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator 609704..610513 Escherichia coli KO11FL 11775585 YP_005276308.1 CDS EKO11_0589 NC_016902.1 610568 611032 R KEGG: eoh:ECO103_3875 hypothetical protein; hypothetical protein complement(610568..611032) Escherichia coli KO11FL 11775586 YP_005276309.1 CDS EKO11_0590 NC_016902.1 611032 611367 R KEGG: eoh:ECO103_3874 putative regulator PrlF; putative regulator PrlF complement(611032..611367) Escherichia coli KO11FL 11775587 YP_005276310.1 CDS EKO11_0591 NC_016902.1 611516 613087 R TIGRFAM: galactarate dehydratase; KEGG: eoh:ECO103_3873 (D)-galactarate dehydrogenase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; galactarate dehydratase complement(611516..613087) Escherichia coli KO11FL 11775588 YP_005276311.1 CDS EKO11_0592 NC_016902.1 613462 614796 D KEGG: ebd:ECBD_0615 D-galactonate transporter; TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1; d-galactonate transporter 613462..614796 Escherichia coli KO11FL 11775589 YP_005276312.1 CDS EKO11_0593 NC_016902.1 614812 615582 D TIGRFAM: 2-dehydro-3-deoxyglucarate aldolase; KEGG: sbo:SBO_2991 alpha-dehydro-beta-deoxy-D-glucarate aldolase; PFAM: HpcH/HpaI aldolase; 2-dehydro-3-deoxyglucarate aldolase 614812..615582 Escherichia coli KO11FL 11775590 YP_005276313.1 CDS EKO11_0594 NC_016902.1 615612 616502 D TIGRFAM: 2-hydroxy-3-oxopropionate reductase; KEGG: sbo:SBO_2990 tartronate semialdehyde reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 2-hydroxy-3-oxopropionate reductase 615612..616502 Escherichia coli KO11FL 11775591 YP_005276314.1 CDS EKO11_0595 NC_016902.1 616518 617744 D PFAM: glycerate kinase; manually curated; KEGG: eok:G2583_3846 hypothetical protein; TIGRFAM: glycerate kinase; glycerate kinase 616518..617744 Escherichia coli KO11FL 11775592 YP_005276315.1 CDS EKO11_0596 NC_016902.1 618767 619954 R KEGG: eoh:ECO103_3868 hypothetical protein; hypothetical protein complement(618767..619954) Escherichia coli KO11FL 11775594 YP_005276316.1 CDS EKO11_0597 NC_016902.1 619976 620515 R KEGG: eoh:ECO103_3867 hypothetical protein; hypothetical protein complement(619976..620515) Escherichia coli KO11FL 11775595 YP_005276317.1 CDS EKO11_0598 NC_016902.1 620771 621127 R manually curated; KEGG: sbo:SBO_2984 DNA-binding transcriptional activator TdcR; DNA-binding transcriptional activator TdcR complement(620771..621127) Escherichia coli KO11FL 11775596 YP_005276318.1 CDS EKO11_0599 NC_016902.1 621304 622242 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sdy:SDY_3310 DNA-binding transcriptional activator TdcA; LysR family transcriptional regulator 621304..622242 Escherichia coli KO11FL 11775597 YP_005276319.1 CDS EKO11_0600 NC_016902.1 622341 623330 D PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: sdy:SDY_3309 threonine dehydratase; pyridoxal-5'-phosphate-dependent protein subunit beta 622341..623330 Escherichia coli KO11FL 11775598 YP_005276320.1 CDS EKO11_0601 NC_016902.1 623352 624683 D TIGRFAM: serine transporter; KEGG: sbc:SbBS512_E3241 threonine/serine transporter TdcC; serine transporter 623352..624683 Escherichia coli KO11FL 11775599 YP_005276321.1 CDS EKO11_0602 NC_016902.1 624709 625917 D KEGG: sbo:SBO_2980 propionate/acetate kinase; TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; acetate kinase 624709..625917 Escherichia coli KO11FL 11779324 YP_005276322.1 CDS EKO11_0603 NC_016902.1 625951 628245 D TIGRFAM: formate acetyltransferase; KEGG: ebd:ECBD_0626 formate acetyltransferase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical; formate acetyltransferase 625951..628245 Escherichia coli KO11FL 11775600 YP_005276323.1 CDS EKO11_0604 NC_016902.1 628259 628648 D KEGG: sbc:SbBS512_E3244 hypothetical protein; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; endoribonuclease L-PSP 628259..628648 Escherichia coli KO11FL 11779325 YP_005276324.1 CDS EKO11_0605 NC_016902.1 628720 630084 D TIGRFAM: L-serine dehydratase 1; KEGG: sbc:SbBS512_E3245 L-serine ammonia-lyase TdcG; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 1 628720..630084 Escherichia coli KO11FL 11779326 YP_005276325.1 CDS EKO11_0606 NC_016902.1 630359 631690 D TIGRFAM: serine transporter; KEGG: ssn:SSON_3268 putative transport system permease protein; serine transporter 630359..631690 Escherichia coli KO11FL 11775601 YP_005276326.1 CDS EKO11_0607 NC_016902.1 631718 633028 D KEGG: eoh:ECO103_3857 hypothetical protein; hypothetical protein 631718..633028 Escherichia coli KO11FL 11775602 YP_005276327.1 CDS EKO11_0608 NC_016902.1 633240 633404 R KEGG: sdy:SDY_3299 hypothetical protein; hypothetical protein complement(633240..633404) Escherichia coli KO11FL 11775603 YP_005276328.1 CDS EKO11_0609 NC_016902.1 633427 634128 R PFAM: Pirin domain protein; KEGG: sbc:SbBS512_E3251 pirin family protein; Pirin domain-containing protein complement(633427..634128) Escherichia coli KO11FL 11775604 YP_005276329.1 CDS EKO11_0610 NC_016902.1 634233 635129 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sbo:SBO_2972 putative transcriptional regulator LysR-type; LysR family transcriptional regulator 634233..635129 Escherichia coli KO11FL 11775605 YP_005276330.1 CDS EKO11_0611 NC_016902.1 635180 635536 R PFAM: protein of unknown function DUF805; KEGG: eoh:ECO103_3853 putative inner membrane protein; hypothetical protein complement(635180..635536) Escherichia coli KO11FL 11775606 YP_005276331.1 CDS EKO11_0612 NC_016902.1 635778 636143 R PFAM: protein of unknown function DUF805; KEGG: sbc:SbBS512_E3258 putative inner membrane protein YhaH; hypothetical protein complement(635778..636143) Escherichia coli KO11FL 11775607 YP_005276332.1 CDS EKO11_0613 NC_016902.1 636436 637422 R KEGG: sbc:SbBS512_E3259 hypothetical protein; PFAM: Glutathione S-transferase domain; glutathione transferase complement(636436..637422) Escherichia coli KO11FL 11775608 YP_005276333.1 CDS EKO11_0614 NC_016902.1 637492 637974 R PFAM: DoxX family protein; KEGG: ssn:SSON_3260 hypothetical protein; DoxX family protein complement(637492..637974) Escherichia coli KO11FL 11775609 YP_005276334.1 CDS EKO11_0615 NC_016902.1 638070 638369 R KEGG: sbc:SbBS512_E3261 hypothetical protein; hypothetical protein complement(638070..638369) Escherichia coli KO11FL 11775610 YP_005276335.1 CDS EKO11_0616 NC_016902.1 638359 638763 R KEGG: sbc:SbBS512_E3262 hypothetical protein; hypothetical protein complement(638359..638763) Escherichia coli KO11FL 11775611 YP_005276336.1 CDS EKO11_0617 NC_016902.1 638766 639071 R PFAM: protein of unknown function DUF883 ElaB; KEGG: sdy:SDY_3285 hypothetical protein; hypothetical protein complement(638766..639071) Escherichia coli KO11FL 11775612 YP_005276337.1 CDS EKO11_0618 NC_016902.1 639109 639477 R PFAM: protein of unknown function DUF1090; KEGG: sbc:SbBS512_E3264 hypothetical protein; hypothetical protein complement(639109..639477) Escherichia coli KO11FL 11775613 YP_005276338.1 CDS EKO11_0619 NC_016902.1 639624 640007 R KEGG: sbc:SbBS512_E3265 hypothetical protein; hypothetical protein complement(639624..640007) Escherichia coli KO11FL 11775614 YP_005276339.1 CDS EKO11_0620 NC_016902.1 640011 640673 R PFAM: SNARE associated Golgi protein; KEGG: sdy:SDY_3282 hypothetical protein; hypothetical protein complement(640011..640673) Escherichia coli KO11FL 11775615 YP_005276340.1 CDS EKO11_0621 NC_016902.1 641018 641794 R KEGG: sbo:SBO_2961 DNA-binding transcriptional repressor ExuR; PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; regulatory protein GntR HTH complement(641018..641794) Escherichia coli KO11FL 11775616 YP_005276341.1 CDS EKO11_0622 NC_016902.1 642090 642806 D KEGG: eoi:ECO111_3919 putative fimbrial protein; putative fimbrial protein 642090..642806 Escherichia coli KO11FL 11779327 YP_005276342.1 CDS EKO11_0623 NC_016902.1 642836 643336 D KEGG: eoh:ECO103_3841 putative fimbrial subunit; putative fimbrial subunit 642836..643336 Escherichia coli KO11FL 11775617 YP_005276343.1 CDS EKO11_0624 NC_016902.1 643428 646112 D KEGG: eoj:ECO26_4198 putative outer membrane usher protein; putative outer membrane usher protein 643428..646112 Escherichia coli KO11FL 11779328 YP_005276344.1 CDS EKO11_0625 NC_016902.1 646109 647197 D PFAM: CblD family pilus biogenesis initiator protein; KEGG: eoh:ECO103_3839 putative minor pilin and initiator protein; CblD family pilus biogenesis initiator protein 646109..647197 Escherichia coli KO11FL 11779329 YP_005276345.1 CDS EKO11_0626 NC_016902.1 647285 648703 R manually curated; TIGRFAM: d-galactonate transporter; KEGG: ebr:ECB_02962 hexuronate transporter; PFAM: major facilitator superfamily MFS_1; d-galactonate transporter complement(647285..648703) Escherichia coli KO11FL 11775618 YP_005276346.1 CDS EKO11_0627 NC_016902.1 649066 650478 D KEGG: eoh:ECO103_3837 glucuronate isomerase; PFAM: Glucuronate isomerase; glucuronate isomerase 649066..650478 Escherichia coli KO11FL 11775619 YP_005276347.1 CDS EKO11_0628 NC_016902.1 650493 651980 D KEGG: eoi:ECO111_3913 altronate hydrolase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein; altronate dehydratase 650493..651980 Escherichia coli KO11FL 11775620 YP_005276348.1 CDS EKO11_0629 NC_016902.1 652063 652614 D KEGG: ssn:SSON_3243 hypothetical protein; hypothetical protein 652063..652614 Escherichia coli KO11FL 11775621 YP_005276349.1 CDS EKO11_0630 NC_016902.1 652619 653863 R PFAM: sodium:dicarboxylate symporter; KEGG: ssn:SSON_3242 serine/threonine transporter SstT; sodium:dicarboxylate symporter complement(652619..653863) Escherichia coli KO11FL 11775622 YP_005276350.1 CDS EKO11_0631 NC_016902.1 654262 655227 R PFAM: Integral membrane protein TerC; KEGG: eoh:ECO103_3833 putative inner membrane protein; integral membrane protein TerC complement(654262..655227) Escherichia coli KO11FL 11775623 YP_005276351.1 CDS EKO11_0632 NC_016902.1 655510 656496 R PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: eoi:ECO111_3909 putative NAD(P)-binding dehydrogenase; oxidoreductase domain-containing protein complement(655510..656496) Escherichia coli KO11FL 11775624 YP_005276352.1 CDS EKO11_0633 NC_016902.1 656575 657258 R PFAM: protein of unknown function DUF218; KEGG: eoi:ECO111_3908 putative thioredoxin-like protein; hypothetical protein complement(656575..657258) Escherichia coli KO11FL 11775625 YP_005276353.1 CDS EKO11_0634 NC_016902.1 657335 657838 R PFAM: protein of unknown function DUF45; KEGG: sdy:SDY_3268 hypothetical protein; hypothetical protein complement(657335..657838) Escherichia coli KO11FL 11775626 YP_005276354.1 CDS EKO11_0635 NC_016902.1 657923 659059 D PFAM: methyltransferase small; KEGG: eoh:ECO103_3829 putative methyltransferase small domain; methyltransferase small 657923..659059 Escherichia coli KO11FL 11775627 YP_005276355.1 CDS EKO11_0637 NC_016902.1 659330 659746 D KEGG: eoh:ECO103_3827 putative DNA-binding transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; transcriptional regulator, XRE family 659330..659746 Escherichia coli KO11FL 11775629 YP_005276356.1 CDS EKO11_0638 NC_016902.1 659791 661809 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: eoh:ECO103_3826 2,4-dienoyl-CoA reductase, NADH and FMN-linked; NADH:flavin oxidoreductase complement(659791..661809) Escherichia coli KO11FL 11775630 YP_005276357.1 CDS EKO11_0639 NC_016902.1 662135 664486 R PFAM: alpha-L-rhamnosidase; KEGG: eoh:ECO103_3825 putative glycosyl hydrolase; alpha-L-rhamnosidase complement(662135..664486) Escherichia coli KO11FL 11775631 YP_005276358.1 CDS EKO11_0640 NC_016902.1 664503 665573 R KEGG: ebd:ECBD_0663 hypothetical protein; hypothetical protein complement(664503..665573) Escherichia coli KO11FL 11775632 YP_005276359.1 CDS EKO11_0641 NC_016902.1 665707 667140 R PFAM: amino acid permease-associated region; KEGG: sbo:SBO_2937 putative oxidoreductase; amino acid permease complement(665707..667140) Escherichia coli KO11FL 11775633 YP_005276360.1 CDS EKO11_0642 NC_016902.1 667203 667652 R PFAM: Conserved hypothetical protein CHP00022; KEGG: ssn:SSON_3216 cryptic beta-D-galactosidase subunit beta; hypothetical protein complement(667203..667652) Escherichia coli KO11FL 11775634 YP_005276361.1 CDS EKO11_0643 NC_016902.1 667649 670741 R PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 42 domain 5 loop region; KEGG: eoh:ECO103_3821 cryptic beta-D-galactosidase subunit alpha; glycoside hydrolase family protein complement(667649..670741) Escherichia coli KO11FL 11775635 YP_005276362.1 CDS EKO11_0644 NC_016902.1 670925 671908 R KEGG: ebd:ECBD_0667 DNA-binding transcriptional repressor EbgR; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator complement(670925..671908) Escherichia coli KO11FL 11775636 YP_005276363.1 CDS EKO11_0645 NC_016902.1 672127 672459 D PFAM: t-RNA-binding domain-containing protein; KEGG: sbo:SBO_2933 hypothetical protein; t-RNA-binding domain-containing protein 672127..672459 Escherichia coli KO11FL 11775637 YP_005276364.1 CDS EKO11_0646 NC_016902.1 672501 673991 R TIGRFAM: putrescine aminotransferase; KEGG: cko:CKO_04486 putrescine--2-oxoglutarate aminotransferase; PFAM: aminotransferase class-III; putrescine aminotransferase complement(672501..673991) Escherichia coli KO11FL 11775638 YP_005276365.1 CDS EKO11_0647 NC_016902.1 674298 675818 D TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; histidine kinase HAMP region domain protein; KEGG: ssn:SSON_3210 aerotaxis sensor receptor, flavoprotein; SMART: chemotaxis sensory transducer; PAC repeat-containing protein; methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 674298..675818 Escherichia coli KO11FL 11775639 YP_005276366.1 CDS EKO11_0648 NC_016902.1 675972 676595 R PFAM: transcriptional regulator PadR family protein; KEGG: eoh:ECO103_3816 putative transcriptional regulator; PadR like family transcriptional regulator complement(675972..676595) Escherichia coli KO11FL 11779330 YP_005276367.1 CDS EKO11_0649 NC_016902.1 676872 677636 D PFAM: FAD-binding 9 siderophore-interacting domain protein; Siderophore-interacting protein; KEGG: sbc:SbBS512_E3506 siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain-containing protein 676872..677636 Escherichia coli KO11FL 11779331 YP_005276368.1 CDS EKO11_0650 NC_016902.1 677890 678396 D PFAM: Uracil-DNA glycosylase superfamily; KEGG: sbc:SbBS512_E3504 G/U mismatch-specific DNA glycosylase; uracil-DNA glycosylase 677890..678396 Escherichia coli KO11FL 11779332 YP_005276369.1 CDS EKO11_0651 NC_016902.1 678474 680315 R KEGG: sbo:SBO_2925 RNA polymerase sigma factor RpoD; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 non-essential domain protein; sigma-70 1.1 domain protein; sigma-70 region 1.2; sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein; RNA polymerase sigma-70 subunit RpoD complement(678474..680315) Escherichia coli KO11FL 11775641 YP_005276370.1 CDS EKO11_0652 NC_016902.1 680510 682255 R TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; TOPRIM domain-containing protein; DNA primase, DnaB-helicase binding domain; DNA primase DnaG DnaB-binding; KEGG: ssn:SSON_3203 DNA primase; SMART: DNA primase DnaG DnaB-binding; Toprim sub domain-containing protein; DNA primase complement(680510..682255) Escherichia coli KO11FL 11775642 YP_005276371.1 CDS EKO11_0653 NC_016902.1 682366 682581 R KEGG: pam:PANA_3388 RpsU; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21; 30S ribosomal protein S21 complement(682366..682581) Escherichia coli KO11FL 11775643 YP_005276372.1 CDS EKO11_0654 NC_016902.1 682818 683831 D TIGRFAM: metalloendopeptidase, glycoprotease family; KEGG: sbc:SbBS512_E3498 putative DNA-binding/iron metalloprotein/AP endonuclease; PFAM: peptidase M22 glycoprotease; glycoprotease family metalloendopeptidase 682818..683831 Escherichia coli KO11FL 11779333 YP_005276373.1 CDS EKO11_0655 NC_016902.1 683874 685337 R KEGG: eoh:ECO103_3743 putative tartrate:succinate antiporter; TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; anion transporter complement(683874..685337) Escherichia coli KO11FL 11775644 YP_005276374.1 CDS EKO11_0656 NC_016902.1 685386 685991 R TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; KEGG: sfv:SFV_3102 L(+)-tartrate dehydratase subunit beta; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit beta complement(685386..685991) Escherichia coli KO11FL 11775645 YP_005276375.1 CDS EKO11_0657 NC_016902.1 685988 686899 R TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; KEGG: sbo:SBO_2919 tartrate dehydratase subunit alpha; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha complement(685988..686899) Escherichia coli KO11FL 11775646 YP_005276376.1 CDS EKO11_0658 NC_016902.1 687106 688038 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebd:ECBD_0681 transcriptional activator TtdR; LysR family transcriptional regulator 687106..688038 Escherichia coli KO11FL 11775647 YP_005276377.1 CDS EKO11_0659 NC_016902.1 688051 688668 R PFAM: protein of unknown function DUF205; KEGG: sdy:SDY_3242 putative glycerol-3-phosphate acyltransferase PlsY; hypothetical protein complement(688051..688668) Escherichia coli KO11FL 11775648 YP_005276378.1 CDS EKO11_0660 NC_016902.1 688773 689141 D TIGRFAM: dihydroneopterin aldolase; KEGG: sdy:SDY_3241 bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase; PFAM: dihydroneopterin aldolase; dihydroneopterin aldolase 688773..689141 Escherichia coli KO11FL 11775649 YP_005276379.1 CDS EKO11_0661 NC_016902.1 689231 690052 D KEGG: sbc:SbBS512_E3488 undecaprenyl pyrophosphate phosphatase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA; undecaprenol kinase 689231..690052 Escherichia coli KO11FL 11775650 YP_005276380.1 CDS EKO11_0662 NC_016902.1 690215 691453 R PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: sbc:SbBS512_E3487 multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase; polynucleotide adenylyltransferase/metal dependent phosphohydrolase complement(690215..691453) Escherichia coli KO11FL 11775651 YP_005276381.1 CDS EKO11_0663 NC_016902.1 691517 692137 R SMART: SH3 domain protein; KEGG: eoh:ECO103_3735 putative signal transduction protein; SH3 domain-containing protein complement(691517..692137) Escherichia coli KO11FL 11775652 YP_005276382.1 CDS EKO11_0664 NC_016902.1 692379 693680 D PFAM: adenylate cyclase; CHAD domain containing protein; KEGG: eoi:ECO111_3877 putative adenylate cyclase; adenylate cyclase 692379..693680 Escherichia coli KO11FL 11779334 YP_005276383.1 CDS EKO11_0665 NC_016902.1 693703 696543 D KEGG: eoi:ECO111_3876 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase; PFAM: glutamate-ammonia ligase adenylyltransferase; GlnD PII-uridylyltransferase; (glutamate--ammonia-ligase) adenylyltransferase 693703..696543 Escherichia coli KO11FL 11775653 YP_005276384.1 CDS EKO11_0666 NC_016902.1 696591 698024 D KEGG: ebd:ECBD_0689 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; TIGRFAM: rfaE bifunctional protein; cytidyltransferase-related domain protein; PFAM: PfkB domain protein; cytidylyltransferase; rfaE bifunctional protein 696591..698024 Escherichia coli KO11FL 11775654 YP_005276385.1 CDS EKO11_0667 NC_016902.1 698091 698483 R manually curated; KEGG: eok:G2583_3774 hypothetical protein; hypothetical protein complement(698091..698483) Escherichia coli KO11FL 11775655 YP_005276386.1 CDS EKO11_0669 NC_016902.1 698818 700479 R KEGG: ssn:SSON_3188 hypothetical protein; PFAM: band 7 protein; SMART: band 7 protein; hypothetical protein complement(698818..700479) Escherichia coli KO11FL 11779335 YP_005276387.1 CDS EKO11_0670 NC_016902.1 700506 701135 R PFAM: protein of unknown function DUF1449; KEGG: eoh:ECO103_3727 putative inner membrane protein; hypothetical protein complement(700506..701135) Escherichia coli KO11FL 11775657 YP_005276388.1 CDS EKO11_0671 NC_016902.1 701404 701604 D PFAM: Glycogen synthesis protein; KEGG: ssn:SSON_3186 glycogen synthesis protein GlgS; Glycogen synthesis protein 701404..701604 Escherichia coli KO11FL 11775658 YP_005276389.1 CDS EKO11_0672 NC_016902.1 701647 702711 R KEGG: ssn:SSON_3184 hypothetical protein; hypothetical protein complement(701647..702711) Escherichia coli KO11FL 11775659 YP_005276390.1 CDS EKO11_0673 NC_016902.1 702713 703462 R PFAM: Pili assembly chaperone, N-terminal; KEGG: ssn:SSON_3183 hypothetical protein; Pili assembly chaperone, N-terminal protein complement(702713..703462) Escherichia coli KO11FL 11775660 YP_005276391.1 CDS EKO11_0674 NC_016902.1 703478 705982 R PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: eoh:ECO103_3723 putative outer membrane usher protein; fimbrial biogenesis outer membrane usher protein complement(703478..705982) Escherichia coli KO11FL 11775661 YP_005276392.1 CDS EKO11_0675 NC_016902.1 706042 706593 R PFAM: Fimbrial protein domain-containing protein; KEGG: eoh:ECO103_3722 putative fimbrial protein; fimbrial protein domain-containing protein complement(706042..706593) Escherichia coli KO11FL 11775662 YP_005276393.1 CDS EKO11_0676 NC_016902.1 706876 707166 R PFAM: protein of unknown function DUF526; KEGG: sbc:SbBS512_E3479 hypothetical protein; hypothetical protein complement(706876..707166) Escherichia coli KO11FL 11775663 YP_005276394.1 CDS EKO11_0677 NC_016902.1 707540 708193 D KEGG: sdy:SDY_3226 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; 3,4-dihydroxy-2-butanone 4-phosphate synthase 707540..708193 Escherichia coli KO11FL 11775664 YP_005276395.1 CDS EKO11_0678 NC_016902.1 708455 708625 D KEGG: sbc:SbBS512_E3475 hypothetical protein; hypothetical protein 708455..708625 Escherichia coli KO11FL 11775665 YP_005276396.1 CDS EKO11_0679 NC_016902.1 708683 709456 R PFAM: zinc/iron permease; KEGG: ssn:SSON_3177 zinc transporter ZupT; zinc/iron permease complement(708683..709456) Escherichia coli KO11FL 11775666 YP_005276397.1 CDS EKO11_0680 NC_016902.1 709572 710387 D PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: eoh:ECO103_3717 hypothetical protein; extradiol ring-cleavage dioxygenase class III protein subunit B 709572..710387 Escherichia coli KO11FL 11775667 YP_005276398.1 CDS EKO11_0681 NC_016902.1 710425 711585 R KEGG: sbc:SbBS512_E3470 glutathionylspermidine synthase family protein; PFAM: glutathionylspermidine synthase; Trypanothione synthase complement(710425..711585) Escherichia coli KO11FL 11775668 YP_005276399.1 CDS EKO11_0682 NC_016902.1 711591 712262 R PFAM: protein of unknown function DUF1190; KEGG: ssn:SSON_3174 hypothetical protein; hypothetical protein complement(711591..712262) Escherichia coli KO11FL 11775669 YP_005276400.1 CDS EKO11_0683 NC_016902.1 712410 713891 R KEGG: ssn:SSON_3173 outer membrane channel protein; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein; TolC family type I secretion outer membrane protein complement(712410..713891) Escherichia coli KO11FL 11775670 YP_005276401.1 CDS EKO11_0684 NC_016902.1 714096 714725 D KEGG: sdy:SDY_3206 ADP-ribose pyrophosphatase NudF; PFAM: NUDIX hydrolase; ADP-ribose diphosphatase 714096..714725 Escherichia coli KO11FL 11775671 YP_005276402.1 CDS EKO11_0685 NC_016902.1 714726 715148 D PFAM: protein of unknown function DUF1249; KEGG: sbc:SbBS512_E3466 hypothetical protein; hypothetical protein 714726..715148 Escherichia coli KO11FL 11775672 YP_005276403.1 CDS EKO11_0686 NC_016902.1 715173 716000 D PFAM: Calcineurin phosphoesterase domain protein; metallophosphoesterase; KEGG: sdy:SDY_3208 cyclic 3',5'-adenosine monophosphate phosphodiesterase; calcineurin phosphoesterase 715173..716000 Escherichia coli KO11FL 11775673 YP_005276404.1 CDS EKO11_0687 NC_016902.1 716000 716581 D PFAM: protein of unknown function UPF0227; KEGG: sdy:SDY_3209 esterase YqiA; hypothetical protein 716000..716581 Escherichia coli KO11FL 11779336 YP_005276405.1 CDS EKO11_0688 NC_016902.1 716610 718502 D SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA topoisomerase IV, B subunit; KEGG: sbo:SBO_2888 DNA topoisomerase IV subunit B; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; DNA gyrase subunit B domain protein; DNA topoisomerase IV subunit B 716610..718502 Escherichia coli KO11FL 11779337 YP_005276406.1 CDS EKO11_0689 NC_016902.1 718550 718864 R PFAM: Antibiotic biosynthesis monooxygenase; KEGG: sbc:SbBS512_E3462 quinol monooxygenase YgiN; antibiotic biosynthesis monooxygenase complement(718550..718864) Escherichia coli KO11FL 11775674 YP_005276407.1 CDS EKO11_0690 NC_016902.1 718895 719476 R PFAM: NAD(P)H dehydrogenase (quinone); KEGG: sbc:SbBS512_E3461 modulator of drug activity B; NAD(P)H dehydrogenase (quinone) complement(718895..719476) Escherichia coli KO11FL 11775675 YP_005276408.1 CDS EKO11_0691 NC_016902.1 719794 720126 D manually curated; KEGG: eoh:ECO103_3705 hypothetical protein; hypothetical protein 719794..720126 Escherichia coli KO11FL 11775676 YP_005276409.1 CDS EKO11_0692 NC_016902.1 720172 721521 R KEGG: eoh:ECO103_3704 sensor protein QseC; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase complement(720172..721521) Escherichia coli KO11FL 11775677 YP_005276410.1 CDS EKO11_0693 NC_016902.1 721518 722177 R KEGG: eok:G2583_3746 DNA-binding response regulator in two-component regulatory system with QseC; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; two component transcriptional regulator, winged helix family complement(721518..722177) Escherichia coli KO11FL 11779338 YP_005276411.1 CDS EKO11_0694 NC_016902.1 722329 722721 D PFAM: protein of unknown function DUF388, OB-fold; KEGG: sdy:SDY_3215 hypothetical protein; hypothetical protein 722329..722721 Escherichia coli KO11FL 11775678 YP_005276412.1 CDS EKO11_0695 NC_016902.1 722774 723256 D PFAM: transcription activator effector binding; KEGG: ssn:SSON_3162 hypothetical protein; transcription activator effector binding protein 722774..723256 Escherichia coli KO11FL 11775679 YP_005276413.1 CDS EKO11_0697 NC_016902.1 723802 726060 D SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA topoisomerase IV, A subunit; KEGG: sfv:SFV_3068 DNA topoisomerase IV subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; DNA topoisomerase IV subunit A 723802..726060 Escherichia coli KO11FL 11775681 YP_005276414.1 CDS EKO11_0698 NC_016902.1 726293 727030 D SMART: phospholipid/glycerol acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; KEGG: sbc:SbBS512_E3455 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase 726293..727030 Escherichia coli KO11FL 11775682 YP_005276415.1 CDS EKO11_0699 NC_016902.1 727105 728517 D PFAM: multicopper oxidase type 3; multicopper oxidase type 2; KEGG: sbc:SbBS512_E3454 repressor protein for FtsI; multicopper oxidase type 3 727105..728517 Escherichia coli KO11FL 11775683 YP_005276416.1 CDS EKO11_0700 NC_016902.1 728628 730847 D KEGG: eoh:ECO103_3697 hypothetical protein; PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; radical SAM protein 728628..730847 Escherichia coli KO11FL 11775684 YP_005276417.1 CDS EKO11_0701 NC_016902.1 730890 731147 R KEGG: sbc:SbBS512_E3443 putative outer membrane lipoprotein; putative outer membrane lipoprotein complement(730890..731147) Escherichia coli KO11FL 11775685 YP_005276418.1 CDS EKO11_0702 NC_016902.1 731198 732124 R KEGG: eoi:ECO111_3840 hypothetical protein; hypothetical protein complement(731198..732124) Escherichia coli KO11FL 11775686 YP_005276419.1 CDS EKO11_0703 NC_016902.1 732324 733151 R KEGG: ebd:ECBD_0728 2,5-diketo-D-gluconate reductase A; PFAM: aldo/keto reductase; 2,5-didehydrogluconate reductase complement(732324..733151) Escherichia coli KO11FL 11775687 YP_005276420.1 CDS EKO11_0704 NC_016902.1 733256 734419 R PFAM: iron-containing alcohol dehydrogenase; KEGG: sfv:SFV_3060 putative oxidoreductase; iron-containing alcohol dehydrogenase complement(733256..734419) Escherichia coli KO11FL 11775688 YP_005276421.1 CDS EKO11_0705 NC_016902.1 734556 735512 D KEGG: eoi:ECO111_3837 putative DNA-binding transcriptional regulator, AraC-type; PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 734556..735512 Escherichia coli KO11FL 11775689 YP_005276422.1 CDS EKO11_0706 NC_016902.1 735552 736211 R PFAM: SNARE associated Golgi protein; KEGG: ssn:SSON_3152 hypothetical protein; hypothetical protein complement(735552..736211) Escherichia coli KO11FL 11775690 YP_005276423.1 CDS EKO11_0707 NC_016902.1 736351 737538 R KEGG: eoh:ECO103_3690 cystathionine beta-lyase; TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; cystathionine beta-lyase complement(736351..737538) Escherichia coli KO11FL 11779339 YP_005276424.1 CDS EKO11_0709 NC_016902.1 737789 738523 D KEGG: sdy:SDY_3067 biopolymer transport protein ExbB; TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel; tonB-system energizer ExbB 737789..738523 Escherichia coli KO11FL 11775691 YP_005276425.1 CDS EKO11_0710 NC_016902.1 738530 738955 D KEGG: sbc:SbBS512_E3433 biopolymer transport protein ExbD; TIGRFAM: TonB system transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR; TonB system transport protein ExbD 738530..738955 Escherichia coli KO11FL 11775692 YP_005276426.1 CDS EKO11_0711 NC_016902.1 739227 740111 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sbc:SbBS512_E3432 oxidoreductase; short-chain dehydrogenase/reductase SDR complement(739227..740111) Escherichia coli KO11FL 11775693 YP_005276427.1 CDS EKO11_0712 NC_016902.1 740302 740796 D PFAM: Uncharacterised protein family UPF0114; KEGG: sbc:SbBS512_E3431 hypothetical protein; hypothetical protein 740302..740796 Escherichia coli KO11FL 11775694 YP_005276428.1 CDS EKO11_0713 NC_016902.1 740836 741876 R PFAM: aldo/keto reductase; KEGG: eoh:ECO103_3685 aldo-keto reductase; aldo/keto reductase complement(740836..741876) Escherichia coli KO11FL 11775695 YP_005276429.1 CDS EKO11_0714 NC_016902.1 742033 742920 D KEGG: eoh:ECO103_3684 putative hydrolase; Carboxymethylenebutenolidase 742033..742920 Escherichia coli KO11FL 11775696 YP_005276430.1 CDS EKO11_0715 NC_016902.1 743039 743326 D KEGG: sdy:SDY_3075 hypothetical protein; hypothetical protein 743039..743326 Escherichia coli KO11FL 11775697 YP_005276431.1 CDS EKO11_0716 NC_016902.1 743515 744633 D TIGRFAM: hydrogenase (NiFe) small subunit HydA; KEGG: sbc:SbBS512_E3424 hydrogenase 2 small subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; hydrogenase (NiFe) small subunit HydA 743515..744633 Escherichia coli KO11FL 11775698 YP_005276432.1 CDS EKO11_0717 NC_016902.1 744636 745622 D KEGG: sbo:SBO_2867 hydrogenase 2 protein HybA; hydrogenase 2 protein HybA 744636..745622 Escherichia coli KO11FL 11775699 YP_005276433.1 CDS EKO11_0718 NC_016902.1 745612 746790 D PFAM: Polysulphide reductase NrfD; KEGG: sdy:SDY_3078 putative hydrogenase 2 b cytochrome subunit; polysulfide reductase NrfD 745612..746790 Escherichia coli KO11FL 11775700 YP_005276434.1 CDS EKO11_0719 NC_016902.1 746787 748490 D KEGG: sbc:SbBS512_E3421 hydrogenase 2 large subunit; PFAM: nickel-dependent hydrogenase large subunit; cytochrome-c3 hydrogenase 746787..748490 Escherichia coli KO11FL 11775701 YP_005276435.1 CDS EKO11_0720 NC_016902.1 748490 748984 D KEGG: eok:G2583_3719 putative maturation element for hydrogenase 2; TIGRFAM: hydrogenase expression/formation protein; hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; hydrogenase expression/formation protein 748490..748984 Escherichia coli KO11FL 11779341 YP_005276436.1 CDS EKO11_0721 NC_016902.1 748977 749465 D KEGG: sbc:SbBS512_E3419 hydrogenase 2-specific chaperone; hydrogenase 2-specific chaperone 748977..749465 Escherichia coli KO11FL 11775702 YP_005276437.1 CDS EKO11_0722 NC_016902.1 749458 749799 D KEGG: sbc:SbBS512_E3418 hydrogenase nickel incorporation protein HybF; TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis HypA; hydrogenase nickel incorporation protein HypA 749458..749799 Escherichia coli KO11FL 11775703 YP_005276438.1 CDS EKO11_0723 NC_016902.1 749812 750060 D KEGG: sdy:SDY_3083 hydrogenase 2 accessory protein HypG; TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); hydrogenase assembly chaperone HypC/HupF 749812..750060 Escherichia coli KO11FL 11775704 YP_005276439.1 CDS EKO11_0724 NC_016902.1 750183 751049 R PFAM: Glutathione S-transferase domain; KEGG: eoh:ECO103_3673 putative glutathione S-transferase YghU; glutathione S-transferase complement(750183..751049) Escherichia coli KO11FL 11775705 YP_005276440.1 CDS EKO11_0725 NC_016902.1 751254 753113 D KEGG: sdy:SDY_3085 bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase; PFAM: CHAP domain containing protein; glutathionylspermidine synthase; glutathionylspermidine synthase 751254..753113 Escherichia coli KO11FL 11779342 YP_005276441.1 CDS EKO11_0726 NC_016902.1 753405 754904 D PFAM: phosphate transporter; KEGG: sdy:SDY_3086 low-affinity phosphate transport; phosphate transporter 753405..754904 Escherichia coli KO11FL 11775706 YP_005276442.1 CDS EKO11_0727 NC_016902.1 754958 755650 R KEGG: ebd:ECBD_0752 hypothetical protein; hypothetical protein complement(754958..755650) Escherichia coli KO11FL 11775707 YP_005276443.1 CDS EKO11_0728 NC_016902.1 755839 756537 D KEGG: ebd:ECBD_0753 uncharacterized ATP-binding protein YghS; ATP-binding protein 755839..756537 Escherichia coli KO11FL 11775708 YP_005276444.1 CDS EKO11_0729 NC_016902.1 756569 757327 D KEGG: ebd:ECBD_0754 hypothetical protein; hypothetical protein 756569..757327 Escherichia coli KO11FL 11775709 YP_005276445.1 CDS EKO11_0730 NC_016902.1 757373 758722 D PFAM: polysaccharide biosynthesis protein; KEGG: eoi:ECO111_3812 putative inner membrane protein; polysaccharide biosynthesis protein 757373..758722 Escherichia coli KO11FL 11775710 YP_005276446.1 CDS EKO11_0731 NC_016902.1 758722 759546 D KEGG: eoi:ECO111_3811 hypothetical protein; hypothetical protein 758722..759546 Escherichia coli KO11FL 11775711 YP_005276447.1 CDS EKO11_0732 NC_016902.1 759558 760118 D PFAM: Conserved hypothetical protein, YtfJ; KEGG: sfx:S3229 hypothetical protein; hypothetical protein 759558..760118 Escherichia coli KO11FL 11775712 YP_005276448.1 CDS EKO11_0733 NC_016902.1 760149 761219 D PFAM: permease YjgP/YjgQ family protein; KEGG: eok:G2583_3706 permease YjgP/YjgQ family protein precursor; YjgP/YjgQ family permease 760149..761219 Escherichia coli KO11FL 11775713 YP_005276449.1 CDS EKO11_0734 NC_016902.1 761216 762295 D PFAM: permease YjgP/YjgQ family protein; KEGG: eoh:ECO103_3663 hypothetical protein; YjgP/YjgQ family permease 761216..762295 Escherichia coli KO11FL 11775714 YP_005276450.1 CDS EKO11_0735 NC_016902.1 762330 763502 R KEGG: eoh:ECO103_3662 hypothetical protein; PFAM: aminotransferase class I and II; 8-amino-7-oxononanoate synthase complement(762330..763502) Escherichia coli KO11FL 11775715 YP_005276451.1 CDS EKO11_0736 NC_016902.1 763502 763750 R PFAM: phosphopantetheine-binding; KEGG: sfx:S3224 hypothetical protein; phosphopantetheine-binding protein complement(763502..763750) Escherichia coli KO11FL 11775716 YP_005276452.1 CDS EKO11_0737 NC_016902.1 763782 764696 R PFAM: NAD-dependent epimerase/dehydratase; KEGG: eoi:ECO111_3805 hypothetical protein; NAD-dependent epimerase/dehydratase complement(763782..764696) Escherichia coli KO11FL 11779343 YP_005276453.1 CDS EKO11_0738 NC_016902.1 764693 766414 R PFAM: AMP-dependent synthetase and ligase; KEGG: eoh:ECO103_3659 acyl-CoA synthetase; AMP-dependent synthetase and ligase complement(764693..766414) Escherichia coli KO11FL 11775717 YP_005276454.1 CDS EKO11_0739 NC_016902.1 766785 767927 D KEGG: eoi:ECO111_3803 putative DNA-binding transcriptional regulator; putative DNA-binding transcriptional regulator 766785..767927 Escherichia coli KO11FL 11775718 YP_005276455.1 CDS EKO11_0740 NC_016902.1 767934 768698 R KEGG: ebd:ECBD_0758 DNA-binding transcriptional regulator GlcC; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator complement(767934..768698) Escherichia coli KO11FL 11775719 YP_005276456.1 CDS EKO11_0741 NC_016902.1 768949 770448 D KEGG: ebd:ECBD_0759 glycolate oxidase subunit GlcD; TIGRFAM: glycolate oxidase, subunit GlcD; PFAM: FAD linked oxidase domain protein; glycolate oxidase subunit GlcD 768949..770448 Escherichia coli KO11FL 11775720 YP_005276457.1 CDS EKO11_0742 NC_016902.1 770448 771500 D PFAM: FAD linked oxidase domain protein; KEGG: eoi:ECO111_3800 glycolate oxidase FAD binding subunit; FAD linked oxidase domain-containing protein 770448..771500 Escherichia coli KO11FL 11775721 YP_005276458.1 CDS EKO11_0743 NC_016902.1 771511 772734 D PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: eoi:ECO111_3799 glycolate oxidase iron-sulfur subunit; hypothetical protein 771511..772734 Escherichia coli KO11FL 11779344 YP_005276459.1 CDS EKO11_0744 NC_016902.1 772739 773143 D PFAM: protein of unknown function DUF336; KEGG: sfv:SFV_3032 hypothetical protein; hypothetical protein 772739..773143 Escherichia coli KO11FL 11775722 YP_005276460.1 CDS EKO11_0745 NC_016902.1 773165 775336 D TIGRFAM: malate synthase G; KEGG: ebd:ECBD_0763 malate synthase G; PFAM: Malate synthase family protein; malate synthase G 773165..775336 Escherichia coli KO11FL 11775723 YP_005276461.1 CDS EKO11_0746 NC_016902.1 775692 777374 D KEGG: eoh:ECO103_3651 glycolate transporter; TIGRFAM: L-lactate transport; PFAM: L-lactate permease; L-lactate transport 775692..777374 Escherichia coli KO11FL 11775724 YP_005276462.1 CDS EKO11_0748 NC_016902.1 777860 782422 D KEGG: eoi:ECO111_3795 putative lipoprotein AcfD homolog precursor; putative lipoprotein AcfD precursor 777860..782422 Escherichia coli KO11FL 11779345 YP_005276463.1 CDS EKO11_0749 NC_016902.1 782570 783379 D PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; KEGG: eoi:ECO111_3794 bifunctional prepilin leader peptidase/methylase; peptidase A24A domain-containing protein 782570..783379 Escherichia coli KO11FL 11775726 YP_005276464.1 CDS EKO11_0750 NC_016902.1 783445 783855 D KEGG: ebd:ECBD_0767 uncharacterized lipoprotein YghG; lipoprotein YghG 783445..783855 Escherichia coli KO11FL 11775727 YP_005276465.1 CDS EKO11_0751 NC_016902.1 783873 784832 D KEGG: eok:G2583_3687 general secretion pathway protein C; manually curated; TIGRFAM: general secretion pathway protein C; general secretion pathway protein C 783873..784832 Escherichia coli KO11FL 11775728 YP_005276466.1 CDS EKO11_0752 NC_016902.1 784862 786922 D KEGG: eoi:ECO111_3791 putative type II secretion protein GspD; TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein; general secretion pathway protein D 784862..786922 Escherichia coli KO11FL 11775729 YP_005276467.1 CDS EKO11_0753 NC_016902.1 786922 788415 D TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; KEGG: eoi:ECO111_3790 putative type II secretion protein GspE; SMART: AAA ATPase; general secretory pathway protein E 786922..788415 Escherichia coli KO11FL 11775730 YP_005276468.1 CDS EKO11_0754 NC_016902.1 788415 789638 D KEGG: eoi:ECO111_3789 putative type II secretion protein GspF; TIGRFAM: general secretion pathway protein F; PFAM: Type II secretion system F domain; general secretion pathway protein F 788415..789638 Escherichia coli KO11FL 11775731 YP_005276469.1 CDS EKO11_0755 NC_016902.1 789655 790110 D KEGG: ebr:ECB_02835 hypothetical type II secretion protein GspG; TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; general secretion pathway protein G 789655..790110 Escherichia coli KO11FL 11775732 YP_005276470.1 CDS EKO11_0756 NC_016902.1 790114 790677 D TIGRFAM: general secretion pathway protein H; KEGG: eok:G2583_3682 general secretion pathway protein H; general secretion pathway protein H 790114..790677 Escherichia coli KO11FL 11775733 YP_005276471.1 CDS EKO11_0757 NC_016902.1 790674 791045 D KEGG: eoi:ECO111_3786 putative type II secretion protein GspI; TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J; general secretion pathway protein I 790674..791045 Escherichia coli KO11FL 11775734 YP_005276472.1 CDS EKO11_0758 NC_016902.1 791042 791647 D TIGRFAM: general secretion pathway protein J; KEGG: sbc:SbBS512_E3406 general secretion pathway protein GspJ; general secretion pathway protein J 791042..791647 Escherichia coli KO11FL 11775735 YP_005276473.1 CDS EKO11_0759 NC_016902.1 791644 792621 D KEGG: eoi:ECO111_3784 putative type II secretion protein GspK; putative type II secretion protein GspK 791644..792621 Escherichia coli KO11FL 11779346 YP_005276474.1 CDS EKO11_0760 NC_016902.1 792618 793796 D KEGG: sbc:SbBS512_E3404 GspL-like protein; TIGRFAM: general secretion pathway protein L; PFAM: General secretion pathway L; general secretion pathway protein L 792618..793796 Escherichia coli KO11FL 11775736 YP_005276475.1 CDS EKO11_0761 NC_016902.1 793798 794334 D PFAM: General secretion pathway M protein; KEGG: sbc:SbBS512_E3403 putative general secretion pathway protein YghD; general secretion pathway protein M 793798..794334 Escherichia coli KO11FL 11775737 YP_005276476.1 CDS EKO11_0762 NC_016902.1 794664 795371 R PFAM: protein of unknown function DUF554; KEGG: ebr:ECB_02796 predicted inner membrane protein; hypothetical protein complement(794664..795371) Escherichia coli KO11FL 11775739 YP_005276477.1 CDS EKO11_0763 NC_016902.1 795709 797904 D manually curated; KEGG: eok:G2583_3624 ornithine decarboxylase isozyme; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; Ornithine decarboxylase 795709..797904 Escherichia coli KO11FL 11779347 YP_005276478.1 CDS EKO11_0764 NC_016902.1 797954 799210 R TIGRFAM: nucleoside transporter; KEGG: sbc:SbBS512_E3397 nucleoside permease NupG; nucleoside transporter complement(797954..799210) Escherichia coli KO11FL 11775740 YP_005276479.1 CDS EKO11_0765 NC_016902.1 799412 800491 R PFAM: Lytic transglycosylase catalytic; KEGG: sbc:SbBS512_E3396 murein transglycosylase C; lytic transglycosylase complement(799412..800491) Escherichia coli KO11FL 11775741 YP_005276480.1 CDS EKO11_0766 NC_016902.1 800556 800831 R PFAM: Fe(II) trafficking protein YggX; KEGG: sdy:SDY_3110 hypothetical protein; Fe(II) trafficking protein YggX complement(800556..800831) Escherichia coli KO11FL 11775742 YP_005276481.1 CDS EKO11_0767 NC_016902.1 800859 801911 R TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; KEGG: eoh:ECO103_3544 adenine DNA glycosylase; SMART: HhH-GPD family protein; iron-sulfur cluster loop; A/G-specific adenine glycosylase complement(800859..801911) Escherichia coli KO11FL 11775743 YP_005276482.1 CDS EKO11_0768 NC_016902.1 802072 802791 D KEGG: sbc:SbBS512_E3393 tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 802072..802791 Escherichia coli KO11FL 11775744 YP_005276483.1 CDS EKO11_0769 NC_016902.1 802791 803117 D PFAM: protein of unknown function DUF469; KEGG: sdy:SDY_3113 hypothetical protein; hypothetical protein 802791..803117 Escherichia coli KO11FL 11779348 YP_005276484.1 CDS EKO11_0770 NC_016902.1 803301 804020 D KEGG: sdy:SDY_3114 hypothetical protein; hypothetical protein 803301..804020 Escherichia coli KO11FL 11775745 YP_005276485.1 CDS EKO11_0771 NC_016902.1 804196 805242 D KEGG: sbc:SbBS512_E3389 L-asparaginase II; TIGRFAM: L-asparaginase, type II; PFAM: Asparaginase/glutaminase; type II L-asparaginase 804196..805242 Escherichia coli KO11FL 11775746 YP_005276486.1 CDS EKO11_0772 NC_016902.1 805359 806366 D PFAM: protein of unknown function DUF1202; KEGG: sbc:SbBS512_E3388 hypothetical protein; hypothetical protein 805359..806366 Escherichia coli KO11FL 11775747 YP_005276487.1 CDS EKO11_0773 NC_016902.1 806521 807657 R TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; KEGG: eoh:ECO103_3535 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase complement(806521..807657) Escherichia coli KO11FL 11775748 YP_005276488.1 CDS EKO11_0774 NC_016902.1 807650 808243 R KEGG: eoi:ECO111_3702 putative deoxyribonucleotide triphosphate pyrophosphatase; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase complement(807650..808243) Escherichia coli KO11FL 11775749 YP_005276489.1 CDS EKO11_0775 NC_016902.1 808251 808541 R PFAM: protein of unknown function DUF167; KEGG: sfv:SFV_3007 hypothetical protein; hypothetical protein complement(808251..808541) Escherichia coli KO11FL 11779349 YP_005276490.1 CDS EKO11_0776 NC_016902.1 808538 809104 R PFAM: protein of unknown function YGGT; KEGG: sdy:SDY_3120 putative resistance protein; hypothetical protein complement(808538..809104) Escherichia coli KO11FL 11775750 YP_005276491.1 CDS EKO11_0777 NC_016902.1 809122 809826 R PFAM: alanine racemase domain protein; KEGG: sdy:SDY_3122 hypothetical protein; alanine racemase complement(809122..809826) Escherichia coli KO11FL 11775751 YP_005276492.1 CDS EKO11_0778 NC_016902.1 809844 810824 D TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: eoh:ECO103_3530 putative transporter; SMART: AAA ATPase; twitching motility protein 809844..810824 Escherichia coli KO11FL 11775752 YP_005276493.1 CDS EKO11_0779 NC_016902.1 811000 811416 R KEGG: sbc:SbBS512_E3381 Holliday junction resolvase-like protein; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; Holliday junction resolvase YqgF complement(811000..811416) Escherichia coli KO11FL 11775753 YP_005276494.1 CDS EKO11_0780 NC_016902.1 811416 812051 R PFAM: protein of unknown function DUF179; KEGG: ebd:ECBD_0792 hypothetical protein; hypothetical protein complement(811416..812051) Escherichia coli KO11FL 11775754 YP_005276495.1 CDS EKO11_0781 NC_016902.1 812088 813038 R TIGRFAM: glutathione synthetase; KEGG: ebd:ECBD_0793 glutathione synthetase; PFAM: glutathione synthetase ATP-binding; glutathione synthetase domain protein; glutathione synthetase complement(812088..813038) Escherichia coli KO11FL 11779350 YP_005276496.1 CDS EKO11_0782 NC_016902.1 813051 813782 R PFAM: protein of unknown function DUF558; KEGG: sbc:SbBS512_E3378 16S ribosomal RNA methyltransferase RsmE; hypothetical protein complement(813051..813782) Escherichia coli KO11FL 11775755 YP_005276497.1 CDS EKO11_0783 NC_016902.1 813862 814569 R KEGG: sbc:SbBS512_E3377 endonuclease I; PFAM: Endonuclease I; Deoxyribonuclease I complement(813862..814569) Escherichia coli KO11FL 11775756 YP_005276498.1 CDS EKO11_0784 NC_016902.1 814664 815161 R KEGG: eok:G2583_3603 hypothetical protein; manually curated; SMART: protein of unknown function SprT; hypothetical protein complement(814664..815161) Escherichia coli KO11FL 11775757 YP_005276499.1 CDS EKO11_0785 NC_016902.1 815238 816632 R TIGRFAM: sugar transporter; KEGG: sdy:SDY_3129 galactose-proton symport of transport system; sugar transporter complement(815238..816632) Escherichia coli KO11FL 11775758 YP_005276500.1 CDS EKO11_0786 NC_016902.1 817068 818222 R TIGRFAM: S-adenosylmethionine synthetase; KEGG: sdy:SDY_3130 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase; S-adenosylmethionine synthetase complement(817068..818222) Escherichia coli KO11FL 11779351 YP_005276501.1 CDS EKO11_0787 NC_016902.1 818278 818529 D KEGG: eok:G2583_3600 hypothetical protein; hypothetical protein 818278..818529 Escherichia coli KO11FL 11775759 YP_005276502.1 CDS EKO11_0788 NC_016902.1 819017 820993 D KEGG: sdy:SDY_3134 arginine decarboxylase; TIGRFAM: arginine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; arginine decarboxylase 819017..820993 Escherichia coli KO11FL 11775760 YP_005276503.1 CDS EKO11_0789 NC_016902.1 821139 821870 D KEGG: eoi:ECO111_3685 putative lipoprotein; putative lipoprotein 821139..821870 Escherichia coli KO11FL 11775761 YP_005276504.1 CDS EKO11_0790 NC_016902.1 822006 822926 D KEGG: sbo:SBO_3052 agmatinase; TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; agmatinase 822006..822926 Escherichia coli KO11FL 11775762 YP_005276505.1 CDS EKO11_0791 NC_016902.1 823132 823890 R PFAM: peptidase M48 Ste24p; KEGG: eoi:ECO111_3676 putative peptidase; peptidase M48 Ste24p complement(823132..823890) Escherichia coli KO11FL 11775763 YP_005276506.1 CDS EKO11_0792 NC_016902.1 824168 826159 D KEGG: ebd:ECBD_0803 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain-containing protein; Transketolase central region; transketolase 824168..826159 Escherichia coli KO11FL 11775764 YP_005276507.1 CDS EKO11_0793 NC_016902.1 826473 826916 D PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: ebd:ECBD_0805 putative mannitol phosphotransferase subunit EIIA; putative PTS IIA-like nitrogen-regulatory protein PtsN 826473..826916 Escherichia coli KO11FL 11775765 YP_005276508.1 CDS EKO11_0794 NC_016902.1 826944 828332 D TIGRFAM: PTS system, mannitol-specific IIC subunit; KEGG: sbc:SbBS512_E3365 PTS system, mannitol-specific cryptic EIICB component; PFAM: phosphotransferase system EIIC; phosphotransferase system lactose/cellobiose-specific IIB subunit; PTS system mannitol-specific transporter subunit IIC 826944..828332 Escherichia coli KO11FL 11775766 YP_005276509.1 CDS EKO11_0795 NC_016902.1 828347 829624 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: eoh:ECO103_3511 putative dehydrogenase; alcohol dehydrogenase 828347..829624 Escherichia coli KO11FL 11775767 YP_005276510.1 CDS EKO11_0796 NC_016902.1 829621 830586 D TIGRFAM: fructose-1,6-bisphosphatase, class II; KEGG: sfv:SFV_2982 fructose-1,6-bisphosphatase II-like protein; PFAM: GlpX family protein; fructose-1,6-bisphosphatase 829621..830586 Escherichia coli KO11FL 11775768 YP_005276511.1 CDS EKO11_0797 NC_016902.1 830608 831117 D PFAM: Mannitol repressor; KEGG: eoh:ECO103_3509 putative DNA-binding transcriptional regulator; mannitol repressor, MtlR 830608..831117 Escherichia coli KO11FL 11775769 YP_005276512.1 CDS EKO11_0798 NC_016902.1 831114 831827 D KEGG: ssn:SSON_3085 putative fructose transport system kinase; putative fructose transport system kinase 831114..831827 Escherichia coli KO11FL 11775770 YP_005276513.1 CDS EKO11_0799 NC_016902.1 831799 832476 R KEGG: sfx:S3118 putative ATP-binding protein of ABC transport system; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(831799..832476) Escherichia coli KO11FL 11779352 YP_005276514.1 CDS EKO11_0800 NC_016902.1 832470 833147 R KEGG: sbc:SbBS512_E3356 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(832470..833147) Escherichia coli KO11FL 11775771 YP_005276515.1 CDS EKO11_0801 NC_016902.1 833135 833842 R KEGG: eoh:ECO103_3505 putative lipoprotein; putative lipoprotein complement(833135..833842) Escherichia coli KO11FL 11775772 YP_005276516.1 CDS EKO11_0802 NC_016902.1 833843 834421 R KEGG: sbc:SbBS512_E3354 hypothetical protein; hypothetical protein complement(833843..834421) Escherichia coli KO11FL 11775773 YP_005276517.1 CDS EKO11_0803 NC_016902.1 834444 834875 R PFAM: protein of unknown function DUF296; KEGG: sdy:SDY_3154 hypothetical protein; hypothetical protein complement(834444..834875) Escherichia coli KO11FL 11775774 YP_005276518.1 CDS EKO11_0804 NC_016902.1 835247 836266 D TIGRFAM: D-erythrose-4-phosphate dehydrogenase; KEGG: sbc:SbBS512_E3352 erythrose 4-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; D-erythrose-4-phosphate dehydrogenase 835247..836266 Escherichia coli KO11FL 11775775 YP_005276519.1 CDS EKO11_0805 NC_016902.1 836316 837479 D KEGG: sbo:SBO_3067 phosphoglycerate kinase; PFAM: phosphoglycerate kinase; phosphoglycerate kinase 836316..837479 Escherichia coli KO11FL 11775776 YP_005276520.1 CDS EKO11_0806 NC_016902.1 837694 838773 D KEGG: sdy:SDY_3157 fructose-bisphosphate aldolase; TIGRFAM: fructose-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II; fructose-bisphosphate aldolase 837694..838773 Escherichia coli KO11FL 11775777 YP_005276521.1 CDS EKO11_0808 NC_016902.1 839131 839991 D PFAM: MscS Mechanosensitive ion channel; Conserved TM helix repeat-containing protein; KEGG: sbc:SbBS512_E3349 mechanosensitive channel MscS; mechanosensitive ion channel MscS 839131..839991 Escherichia coli KO11FL 11775779 YP_005276522.1 CDS EKO11_0809 NC_016902.1 840130 840765 D KEGG: sdy:SDY_3159 arginine exporter protein; TIGRFAM: L-lysine exporter; PFAM: Lysine exporter protein (LYSE/YGGA); L-lysine exporter 840130..840765 Escherichia coli KO11FL 11775780 YP_005276523.1 CDS EKO11_0810 NC_016902.1 840858 841598 D PFAM: protein of unknown function DUF541; KEGG: sdy:SDY_3160 hypothetical protein; hypothetical protein 840858..841598 Escherichia coli KO11FL 11779353 YP_005276524.1 CDS EKO11_0811 NC_016902.1 841765 842661 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ebd:ECBD_0817 transcriptional regulator, LysR family; LysR family transcriptional regulator 841765..842661 Escherichia coli KO11FL 11775781 YP_005276525.1 CDS EKO11_0812 NC_016902.1 842658 844136 R TIGRFAM: succinate CoA transferase; KEGG: ssn:SSON_3071 putative coenzyme A transferase; PFAM: acetyl-CoA hydrolase/transferase; succinate CoA transferase complement(842658..844136) Escherichia coli KO11FL 11775782 YP_005276526.1 CDS EKO11_0813 NC_016902.1 844160 844945 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sbc:SbBS512_E3341 methylmalonyl-CoA decarboxylase; Enoyl-CoA hydratase/isomerase complement(844160..844945) Escherichia coli KO11FL 11775783 YP_005276527.1 CDS EKO11_0814 NC_016902.1 844956 845951 R KEGG: ebd:ECBD_0820 arginine/ornithine transport system ATPase; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; LAO/AO transport system ATPase complement(844956..845951) Escherichia coli KO11FL 11775784 YP_005276528.1 CDS EKO11_0815 NC_016902.1 845944 848088 R TIGRFAM: methylmalonyl-CoA mutase, large subunit; KEGG: eok:G2583_3571 methylmalonyl-CoA mutase; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein; methylmalonyl-CoA mutase large subunit complement(845944..848088) Escherichia coli KO11FL 11775785 YP_005276529.1 CDS EKO11_0816 NC_016902.1 848292 849185 R KEGG: sdy:SDY_3165 chromosome replication initiation inhibitor protein; TIGRFAM: transcriptional regulator, ArgP family; PFAM: regulatory protein LysR; LysR substrate-binding; LysR family transcriptional regulator ArgP complement(848292..849185) Escherichia coli KO11FL 11775786 YP_005276530.1 CDS EKO11_0817 NC_016902.1 849327 849557 D PFAM: LysR substrate-binding; KEGG: ebd:ECBD_0823 uncharacterized protein YqfE; LysR substrate-binding protein 849327..849557 Escherichia coli KO11FL 11775787 YP_005276531.1 CDS EKO11_0818 NC_016902.1 849613 850272 D TIGRFAM: ribose 5-phosphate isomerase; KEGG: sdy:SDY_3168 ribose-5-phosphate isomerase A; PFAM: Ribose 5-phosphate isomerase; ribose 5-phosphate isomerase 849613..850272 Escherichia coli KO11FL 11775788 YP_005276532.1 CDS EKO11_0819 NC_016902.1 850527 851759 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein; KEGG: sbo:SBO_3080 D-3-phosphoglycerate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 850527..851759 Escherichia coli KO11FL 11775789 YP_005276533.1 CDS EKO11_0820 NC_016902.1 852540 853142 R KEGG: eok:G2583_3564 putative ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase complement(852540..853142) Escherichia coli KO11FL 11775790 YP_005276534.1 CDS EKO11_0821 NC_016902.1 853388 853717 R PFAM: protein of unknown function DUF710; KEGG: sbc:SbBS512_E3331 Z-ring-associated protein; hypothetical protein complement(853388..853717) Escherichia coli KO11FL 11775792 YP_005276535.1 CDS EKO11_0822 NC_016902.1 853885 854463 D KEGG: sbc:SbBS512_E3330 hypothetical protein; TIGRFAM: yecA family protein; PFAM: Uncharacterised protein family UPF0149 (YgfB); yecA family protein 853885..854463 Escherichia coli KO11FL 11775793 YP_005276536.1 CDS EKO11_0823 NC_016902.1 854489 855814 D PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: ebd:ECBD_0829 proline aminopeptidase P II; peptidase M24 854489..855814 Escherichia coli KO11FL 11775794 YP_005276537.1 CDS EKO11_0824 NC_016902.1 855811 856989 D KEGG: eoi:ECO111_3645 2-octaprenyl-6-methoxyphenyl hydroxylase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; 2-polyprenyl-6-methoxyphenol 4-hydroxylase; PFAM: FAD dependent oxidoreductase; UbiH/UbiF/VisC/COQ6 family Ubiquinone biosynthesis hydroxylase 855811..856989 Escherichia coli KO11FL 11775795 YP_005276538.1 CDS EKO11_0825 NC_016902.1 857012 858214 D KEGG: ssn:SSON_3059 hypothetical protein; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; UbiH/UbiF/VisC/COQ6 family Ubiquinone biosynthesis hydroxylase 857012..858214 Escherichia coli KO11FL 11779354 YP_005276539.1 CDS EKO11_0826 NC_016902.1 858661 859755 D KEGG: sbo:SBO_3087 glycine cleavage system aminomethyltransferase T; TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; glycine cleavage system T protein 858661..859755 Escherichia coli KO11FL 11775796 YP_005276540.1 CDS EKO11_0827 NC_016902.1 859779 860168 D KEGG: sbc:SbBS512_E3325 glycine cleavage system protein H; TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; glycine cleavage system H protein 859779..860168 Escherichia coli KO11FL 11775797 YP_005276541.1 CDS EKO11_0828 NC_016902.1 860287 863160 D KEGG: eoh:ECO103_3479 glycine dehydrogenase; TIGRFAM: glycine dehydrogenase; PFAM: Glycine cleavage system P-protein-like; glycine dehydrogenase 860287..863160 Escherichia coli KO11FL 11775798 YP_005276542.1 CDS EKO11_0829 NC_016902.1 863426 864169 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: eoi:ECO111_3640 hypothetical protein; short-chain dehydrogenase/reductase SDR 863426..864169 Escherichia coli KO11FL 11775799 YP_005276543.1 CDS EKO11_0830 NC_016902.1 864226 865659 R PFAM: glycoside hydrolase family 1; KEGG: eoi:ECO111_3639 6-phospho-beta-glucosidase A; glycoside hydrolase complement(864226..865659) Escherichia coli KO11FL 11775800 YP_005276544.1 CDS EKO11_0831 NC_016902.1 865704 866015 D PFAM: protein of unknown function DUF437; KEGG: ssn:SSON_3053 hypothetical protein; hypothetical protein 865704..866015 Escherichia coli KO11FL 11775801 YP_005276545.1 CDS EKO11_0832 NC_016902.1 866179 866838 D KEGG: sbc:SbBS512_E3320 channel protein, hemolysin III family; TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; hemolysin III family channel protein 866179..866838 Escherichia coli KO11FL 11779355 YP_005276546.1 CDS EKO11_0833 NC_016902.1 866915 867895 R KEGG: sfv:SFV_2946 putative global regulator; TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); folate-binding protein YgfZ complement(866915..867895) Escherichia coli KO11FL 11775802 YP_005276547.1 CDS EKO11_0834 NC_016902.1 868138 868404 D PFAM: protein of unknown function DUF339; KEGG: sdy:SDY_3185 hypothetical protein; hypothetical protein 868138..868404 Escherichia coli KO11FL 11775803 YP_005276548.1 CDS EKO11_0835 NC_016902.1 868385 868792 D PFAM: protein of unknown function DUF1434; KEGG: eoh:ECO103_3471 hypothetical protein; hypothetical protein 868385..868792 Escherichia coli KO11FL 11775804 YP_005276549.1 CDS EKO11_0836 NC_016902.1 868832 869353 R KEGG: sdy:SDY_3187 flavodoxin FldB; TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; flavodoxin complement(868832..869353) Escherichia coli KO11FL 11779356 YP_005276550.1 CDS EKO11_0837 NC_016902.1 869465 870361 D KEGG: sdy:SDY_3188 site-specific tyrosine recombinase XerD; TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; tyrosine recombinase XerD 869465..870361 Escherichia coli KO11FL 11775805 YP_005276551.1 CDS EKO11_0838 NC_016902.1 870386 871096 D PFAM: Disulphide bond isomerase, DsbC/G-like; KEGG: eok:G2583_3546 thiol:disulfide interchange protein DsbC precursor; disulfide bond isomerase, DsbC/G-like protein 870386..871096 Escherichia coli KO11FL 11775806 YP_005276552.1 CDS EKO11_0839 NC_016902.1 871102 872835 D KEGG: sbo:SBO_3100 ssDNA exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; single-stranded-DNA-specific exonuclease RecJ 871102..872835 Escherichia coli KO11FL 11775807 YP_005276553.1 CDS EKO11_0840 NC_016902.1 872926 874024 D manually curated; KEGG: sfx:S3076 peptide chain release factor 2; peptide chain release factor 2 join(872926..873000,873002..874024) Escherichia coli KO11FL 11775808 YP_005276554.1 CDS EKO11_0841 NC_016902.1 874034 875551 D TIGRFAM: lysyl-tRNA synthetase; KEGG: sbc:SbBS512_E3309 lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; lysyl-tRNA synthetase 874034..875551 Escherichia coli KO11FL 11775809 YP_005276555.1 CDS EKO11_0842 NC_016902.1 875594 876142 R TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1; KEGG: sfv:SFV_2937 isopentenyl-diphosphate delta-isomerase; PFAM: NUDIX hydrolase; isopentenyl-diphosphate delta-isomerase complement(875594..876142) Escherichia coli KO11FL 11775810 YP_005276556.1 CDS EKO11_0843 NC_016902.1 876265 876390 R KEGG: eoh:ECO103_3463 hypothetical protein; hypothetical protein complement(876265..876390) Escherichia coli KO11FL 11775811 YP_005276557.1 CDS EKO11_0844 NC_016902.1 876392 877969 R manually curated; TIGRFAM: xanthine permease; uracil-xanthine permease; KEGG: eok:G2583_3541 putative xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; xanthine permease complement(876392..877969) Escherichia coli KO11FL 11775812 YP_005276558.1 CDS EKO11_0845 NC_016902.1 878276 880195 D KEGG: eoh:ECO103_3461 putative oxidoreductase Fe-S binding subunit; TIGRFAM: glutamate synthase, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutamate synthase, small subunit 878276..880195 Escherichia coli KO11FL 11779357 YP_005276559.1 CDS EKO11_0846 NC_016902.1 880195 880683 D KEGG: ssn:SSON_3038 putative oxidoreductase, Fe-S subunit; putative oxidoreductase, Fe-S subunit 880195..880683 Escherichia coli KO11FL 11775813 YP_005276560.1 CDS EKO11_0847 NC_016902.1 880719 882086 R PFAM: Xanthine/uracil/vitamin C permease; KEGG: ebd:ECBD_0853 xanthine/uracil/vitamin C permease; xanthine/uracil/vitamin C permease complement(880719..882086) Escherichia coli KO11FL 11775814 YP_005276561.1 CDS EKO11_0848 NC_016902.1 882122 883438 R KEGG: eoh:ECO103_3458 guanine deaminase; TIGRFAM: guanine deaminase; PFAM: amidohydrolase; guanine deaminase complement(882122..883438) Escherichia coli KO11FL 11775815 YP_005276562.1 CDS EKO11_0849 NC_016902.1 883456 884856 R KEGG: eoh:ECO103_3457 putative transporter; TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; uracil-xanthine permease complement(883456..884856) Escherichia coli KO11FL 11779358 YP_005276563.1 CDS EKO11_0850 NC_016902.1 885021 887891 R KEGG: ebw:BWG_2607 putative selenate reductase subunit YgfN; TIGRFAM: selenate reductase, molybdenum-binding subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; [2Fe-2S]-binding domain-containing protein; selenate reductase, molybdenum-binding subunit complement(885021..887891) Escherichia coli KO11FL 11775816 YP_005276564.1 CDS EKO11_0851 NC_016902.1 887888 888667 R KEGG: ssn:SSON_3034 putative selenate reductase subunit YgfM; TIGRFAM: selenate reductase, FAD-binding subunit; PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; selenate reductase, FAD-binding subunit complement(887888..888667) Escherichia coli KO11FL 11775817 YP_005276565.1 CDS EKO11_0852 NC_016902.1 888718 890046 R KEGG: eoi:ECO111_3617 putative chlorohydrolase/aminohydrolase; TIGRFAM: selenium metabolism protein SsnA; PFAM: amidohydrolase; selenium metabolism protein SsnA complement(888718..890046) Escherichia coli KO11FL 11775818 YP_005276566.1 CDS EKO11_0853 NC_016902.1 890049 893147 R KEGG: eoh:ECO103_3453 putative selenate reductase subunit YgfK; TIGRFAM: selenate reductase YgfK; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; selenate reductase YgfK complement(890049..893147) Escherichia coli KO11FL 11775819 YP_005276567.1 CDS EKO11_0854 NC_016902.1 893469 894047 R TIGRFAM: molybdenum hydroxylase accessory protein, YgfJ family; KEGG: eoh:ECO103_3452 hypothetical protein; molybdenum hydroxylase accessory protein, YgfJ family complement(893469..894047) Escherichia coli KO11FL 11775820 YP_005276568.1 CDS EKO11_0855 NC_016902.1 894150 894920 D KEGG: eoh:ECO103_3451 hypothetical protein; hypothetical protein 894150..894920 Escherichia coli KO11FL 11775821 YP_005276569.1 CDS EKO11_0856 NC_016902.1 894968 896593 D KEGG: eoi:ECO111_3613 hypothetical protein; TIGRFAM: selenium-dependent molybdenum hydroxylase system protein, YqeB family; PFAM: protein of unknown function DUF182; biotin/lipoyl attachment domain-containing protein; selenium-dependent molybdenum hydroxylase system protein, YqeB family 894968..896593 Escherichia coli KO11FL 11779359 YP_005276570.1 CDS EKO11_0857 NC_016902.1 896634 897566 R TIGRFAM: carbamate kinase; KEGG: eoh:ECO103_3449 carbamate kinase; PFAM: aspartate/glutamate/uridylate kinase; carbamate kinase complement(896634..897566) Escherichia coli KO11FL 11775822 YP_005276571.1 CDS EKO11_0858 NC_016902.1 897614 898999 R KEGG: sbo:SBO_3111 phenylhydantoinase; TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase; dihydropyrimidinase complement(897614..898999) Escherichia coli KO11FL 11775823 YP_005276572.1 CDS EKO11_0859 NC_016902.1 899052 900263 R KEGG: sbo:SBO_3112 peptidase; TIGRFAM: M20/DapE family protein YgeY; PFAM: peptidase M20; peptidase dimerisation domain protein; M20/DapE family protein YgeY complement(899052..900263) Escherichia coli KO11FL 11775824 YP_005276573.1 CDS EKO11_0860 NC_016902.1 900321 901517 R KEGG: sbo:SBO_3113 diaminopropionate ammonia-lyase; TIGRFAM: diaminopropionate ammonia-lyase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; diaminopropionate ammonia-lyase complement(900321..901517) Escherichia coli KO11FL 11775825 YP_005276574.1 CDS EKO11_0861 NC_016902.1 901575 902762 R KEGG: eoh:ECO103_3445 aspartate/ornithine carbamoyltransferase family protein; TIGRFAM: carbamoyltransferase YgeW; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; carbamoyltransferase YgeW complement(901575..902762) Escherichia coli KO11FL 11775826 YP_005276575.1 CDS EKO11_0862 NC_016902.1 903241 905019 D KEGG: eoj:ECO26_3958 putative DNA-binding transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase; PAS domain containing protein; PAS modulated Fis family sigma-54-specific transcriptional regulator 903241..905019 Escherichia coli KO11FL 11775827 YP_005276576.1 CDS EKO11_0863 NC_016902.1 905059 905538 R PFAM: [2Fe-2S]-binding domain-containing protein; ferredoxin; KEGG: sbo:SBO_3117 xanthine dehydrogenase subunit XdhC; (2Fe-2S)-binding domain-containing protein complement(905059..905538) Escherichia coli KO11FL 11775828 YP_005276577.1 CDS EKO11_0864 NC_016902.1 905535 906413 R PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: sfv:SFV_2932 xanthine dehydrogenase subunit XdhB; molybdopterin dehydrogenase FAD-binding protein complement(905535..906413) Escherichia coli KO11FL 11775829 YP_005276578.1 CDS EKO11_0865 NC_016902.1 906424 908721 R PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: eoi:ECO111_3604 xanthine dehydrogenase subunit XdhA; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein complement(906424..908721) Escherichia coli KO11FL 11775830 YP_005276579.1 CDS EKO11_0866 NC_016902.1 909136 909891 D KEGG: sbc:SbBS512_E3304 peptidase, M23B family; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; peptidase M23 909136..909891 Escherichia coli KO11FL 11775831 YP_005276580.1 CDS EKO11_0867 NC_016902.1 910277 911887 D KEGG: eoh:ECO103_3433 hypothetical protein; hypothetical protein 910277..911887 Escherichia coli KO11FL 11775833 YP_005276581.1 CDS EKO11_0869 NC_016902.1 912956 913621 D KEGG: eoh:ECO103_3430 surface presentation of antigens protein SpaP; TIGRFAM: Yop virulence translocation R; PFAM: type III secretion system inner membrane P protein; Yop virulence translocation R 912956..913621 Escherichia coli KO11FL 11775835 YP_005276582.1 CDS EKO11_0871 NC_016902.1 913892 914659 D KEGG: eoi:ECO111_3596 type III secretion protein EpaR; TIGRFAM: type III secretion protein SpaR/YscT/HrcT; PFAM: type III secretion system inner membrane R protein; type III secretion protein SpaR/YscT/HrcT 913892..914659 Escherichia coli KO11FL 11775837 YP_005276583.1 CDS EKO11_0872 NC_016902.1 914668 915399 D PFAM: type III secretion exporter; KEGG: etw:ECSP_3819 surface presentation of antigens protein SpaS; type III secretion exporter 914668..915399 Escherichia coli KO11FL 11779360 YP_005276584.1 CDS EKO11_0873 NC_016902.1 915426 915788 D PFAM: type III secretion exporter; KEGG: etw:ECSP_3819 surface presentation of antigens protein SpaS; type III secretion exporter 915426..915788 Escherichia coli KO11FL 11775838 YP_005276585.1 CDS EKO11_0874 NC_016902.1 915849 916142 R PFAM: InvH outer membrane lipoprotein; KEGG: set:SEN2741 cell adherance/invasion protein; InvH outer membrane lipoprotein complement(915849..916142) Escherichia coli KO11FL 11775839 YP_005276586.1 CDS EKO11_0875 NC_016902.1 916213 916644 R PFAM: regulatory protein LuxR; KEGG: eoj:ECO26_3936 putative transcriptional regulator; regulatory protein LuxR complement(916213..916644) Escherichia coli KO11FL 11775840 YP_005276587.1 CDS EKO11_0876 NC_016902.1 916902 918083 D KEGG: eoh:ECO103_3424 type III secretion protein EprH; TIGRFAM: type III secretion system protein PrgH/EprH; PFAM: Type III secretion system, PrgH/EprH-like; type III secretion system protein PrgH/EprH 916902..918083 Escherichia coli KO11FL 11775841 YP_005276588.1 CDS EKO11_0881 NC_016902.1 920232 920663 D KEGG: eoj:ECO26_3930 hypothetical protein; hypothetical protein 920232..920663 Escherichia coli KO11FL 11775846 YP_005276589.1 CDS EKO11_0884 NC_016902.1 921561 922037 R KEGG: etw:ECSP_3808 predicted lytic transglycosylase; manually curated; PFAM: Lytic transglycosylase catalytic; lytic transglycosylase complement(921561..922037) Escherichia coli KO11FL 11775848 YP_005276590.1 CDS EKO11_0885 NC_016902.1 922120 922338 R KEGG: eoh:ECO103_3414 hypothetical protein; hypothetical protein complement(922120..922338) Escherichia coli KO11FL 11775849 YP_005276591.1 CDS EKO11_0886 NC_016902.1 922505 923881 R PFAM: transcriptional regulator domain-containing protein; KEGG: ebw:BWG_2587 transcriptional regulator; transcriptional regulator CadC complement(922505..923881) Escherichia coli KO11FL 11775850 YP_005276592.1 CDS EKO11_0887 NC_016902.1 924216 924707 R PFAM: Tetratricopeptide TPR_3 repeat-containing protein; KEGG: ssn:SSON_3011 hypothetical protein; Tetratricopeptide TPR_3 repeat-containing protein complement(924216..924707) Escherichia coli KO11FL 11775851 YP_005276593.1 CDS EKO11_0888 NC_016902.1 924985 925422 R KEGG: eoi:ECO111_3579 hypothetical protein; hypothetical protein complement(924985..925422) Escherichia coli KO11FL 11775852 YP_005276594.1 CDS EKO11_0889 NC_016902.1 925616 926041 D KEGG: eoj:ECO26_3922 hypothetical protein; hypothetical protein 925616..926041 Escherichia coli KO11FL 11775853 YP_005276595.1 CDS EKO11_0890 NC_016902.1 926017 926157 D KEGG: fbc:FB2170_06780 hypothetical protein; hypothetical protein 926017..926157 Escherichia coli KO11FL 11779361 YP_005276596.1 CDS EKO11_0891 NC_016902.1 926190 926672 R KEGG: ssn:SSON_3009 hypothetical protein; hypothetical protein complement(926190..926672) Escherichia coli KO11FL 11775854 YP_005276597.1 CDS EKO11_0892 NC_016902.1 926665 927474 R KEGG: eoi:ECO111_3576 putative transcriptional regulator; manually curated; PFAM: transcriptional regulator domain-containing protein; transcriptional regulator CadC complement(926665..927474) Escherichia coli KO11FL 11775855 YP_005276598.1 CDS EKO11_0893 NC_016902.1 927595 927726 D hypothetical protein 927595..927726 Escherichia coli KO11FL 11779362 YP_005276599.1 CDS EKO11_0894 NC_016902.1 927808 928440 R KEGG: eok:G2583_3503 hypothetical protein; hypothetical protein complement(927808..928440) Escherichia coli KO11FL 11775856 YP_005276600.1 CDS EKO11_0895 NC_016902.1 928900 930129 R KEGG: ebd:ECBD_0877 serine transporter; TIGRFAM: serine transporter; PFAM: Amino acid transporter transmembrane; serine transporter complement(928900..930129) Escherichia coli KO11FL 11775857 YP_005276601.1 CDS EKO11_0896 NC_016902.1 930384 931565 D TIGRFAM: acetyl-CoA acetyltransferase; KEGG: ebd:ECBD_0878 acetyl-CoA acetyltransferase; PFAM: Thiolase-like; acetyl-CoA acetyltransferase 930384..931565 Escherichia coli KO11FL 11775858 YP_005276602.1 CDS EKO11_0897 NC_016902.1 931852 932688 D KEGG: eoh:ECO103_3403 5-keto-4-deoxyuronate isomerase; PFAM: KduI/IolB isomerase; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase 931852..932688 Escherichia coli KO11FL 11775859 YP_005276603.1 CDS EKO11_0898 NC_016902.1 932718 933479 D KEGG: ebr:ECB_02690 2-deoxy-D-gluconate 3-dehydrogenase; TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; 2-deoxy-D-gluconate 3-dehydrogenase 932718..933479 Escherichia coli KO11FL 11775860 YP_005276604.1 CDS EKO11_0899 NC_016902.1 933794 935212 D TIGRFAM: sugar transporter; KEGG: ssn:SSON_3001 low-affinity L-arabinose transport system proton symport protein; sugar transporter 933794..935212 Escherichia coli KO11FL 11775861 YP_005276605.1 CDS EKO11_0900 NC_016902.1 935341 936033 D KEGG: sbc:SbBS512_E3023 putative racemase; TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; aspartate racemase 935341..936033 Escherichia coli KO11FL 11775862 YP_005276606.1 CDS EKO11_0901 NC_016902.1 936020 936955 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sdy:SDY_3056 DNA-binding transcriptional regulator LysR; LysR family transcriptional regulator complement(936020..936955) Escherichia coli KO11FL 11775863 YP_005276607.1 CDS EKO11_0902 NC_016902.1 937077 938339 D KEGG: ebd:ECBD_0886 diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; diaminopimelate decarboxylase 937077..938339 Escherichia coli KO11FL 11775864 YP_005276608.1 CDS EKO11_0903 NC_016902.1 938346 939377 R KEGG: sbc:SbBS512_E3025 DNA-binding transcriptional regulator GalR; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; LacI family transcriptional regulator complement(938346..939377) Escherichia coli KO11FL 11779363 YP_005276609.1 CDS EKO11_0904 NC_016902.1 939963 942122 D KEGG: ssn:SSON_2996 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; AMP-dependent synthetase and ligase 939963..942122 Escherichia coli KO11FL 11779364 YP_005276610.1 CDS EKO11_0905 NC_016902.1 942115 943308 D PFAM: major facilitator superfamily MFS_1; KEGG: ebd:ECBD_0889 lysophospholipid transporter LplT; major facilitator superfamily protein 942115..943308 Escherichia coli KO11FL 11775865 YP_005276611.1 CDS EKO11_0906 NC_016902.1 943340 944380 R PFAM: aldo/keto reductase; KEGG: sfv:SFV_2912 putative aldo-keto reductase; aldo/keto reductase complement(943340..944380) Escherichia coli KO11FL 11775866 YP_005276612.1 CDS EKO11_0907 NC_016902.1 944488 944706 R PFAM: protein of unknown function DUF903; KEGG: sdy:SDY_3050 hypothetical protein; hypothetical protein complement(944488..944706) Escherichia coli KO11FL 11775867 YP_005276613.1 CDS EKO11_0908 NC_016902.1 944844 945557 R PFAM: Integral membrane protein TerC; KEGG: sdy:SDY_3049 putative transport protein; integral membrane protein TerC complement(944844..945557) Escherichia coli KO11FL 11775868 YP_005276614.1 CDS EKO11_0909 NC_016902.1 945626 946315 R KEGG: sdy:SDY_3048 DNA mismatch repair protein; TIGRFAM: DNA mismatch repair endonuclease mutH; PFAM: DNA mismatch repair protein MutH, conserved region; DNA mismatch repair endonuclease mutH complement(945626..946315) Escherichia coli KO11FL 11775869 YP_005276615.1 CDS EKO11_0910 NC_016902.1 946501 946647 D KEGG: ebd:ECBD_0894 hypothetical protein; hypothetical protein 946501..946647 Escherichia coli KO11FL 11775870 YP_005276616.1 CDS EKO11_0911 NC_016902.1 947000 947530 D PFAM: NUDIX hydrolase; KEGG: sdy:SDY_3047 dinucleoside polyphosphate hydrolase; NUDIX hydrolase 947000..947530 Escherichia coli KO11FL 11775871 YP_005276617.1 CDS EKO11_0912 NC_016902.1 947543 949789 D TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; GAF domain protein; PEP-utilising protein mobile region; KEGG: ssn:SSON_2986 fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain; SMART: GAF domain protein; protein PtsP 947543..949789 Escherichia coli KO11FL 11775872 YP_005276618.1 CDS EKO11_0913 NC_016902.1 949940 950815 D KEGG: sdy:SDY_3045 prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 949940..950815 Escherichia coli KO11FL 11775873 YP_005276619.1 CDS EKO11_0914 NC_016902.1 950822 951616 D TIGRFAM: thymidylate synthase; KEGG: ssn:SSON_2984 thymidylate synthase; PFAM: thymidylate synthase; thymidylate synthase 950822..951616 Escherichia coli KO11FL 11775874 YP_005276620.1 CDS EKO11_0915 NC_016902.1 951801 952271 D KEGG: sdy:SDY_3043 hypothetical protein; hypothetical protein 951801..952271 Escherichia coli KO11FL 11775875 YP_005276621.1 CDS EKO11_0916 NC_016902.1 952262 952825 D KEGG: ssn:SSON_2982 hypothetical protein; hypothetical protein 952262..952825 Escherichia coli KO11FL 11775876 YP_005276622.1 CDS EKO11_0917 NC_016902.1 952822 953229 D PFAM: Protein of unknown function DUF2509; KEGG: eoi:ECO111_3552 hypothetical protein; hypothetical protein 952822..953229 Escherichia coli KO11FL 11775877 YP_005276623.1 CDS EKO11_0918 NC_016902.1 953214 953537 D KEGG: ssn:SSON_2980 hypothetical protein; hypothetical protein 953214..953537 Escherichia coli KO11FL 11775878 YP_005276624.1 CDS EKO11_0919 NC_016902.1 953550 956918 D KEGG: ebd:ECBD_0903 exonuclease V subunit gamma; TIGRFAM: exodeoxyribonuclease V, gamma subunit; exodeoxyribonuclease V subunit gamma 953550..956918 Escherichia coli KO11FL 11775879 YP_005276625.1 CDS EKO11_0920 NC_016902.1 957094 959982 D PFAM: peptidase M16 domain protein; KEGG: eok:G2583_3475 protease III; peptidase M16 domain-containing protein 957094..959982 Escherichia coli KO11FL 11775880 YP_005276626.1 CDS EKO11_0921 NC_016902.1 959975 963517 D TIGRFAM: exodeoxyribonuclease V, beta subunit; KEGG: eoj:ECO26_3892 exonuclease V subunit beta; PFAM: UvrD/REP helicase; exodeoxyribonuclease V subunit beta 959975..963517 Escherichia coli KO11FL 11775881 YP_005276627.1 CDS EKO11_0922 NC_016902.1 963517 965343 D TIGRFAM: exodeoxyribonuclease V, alpha subunit; KEGG: eoh:ECO103_3378 exonuclease V subunit alpha; SMART: AAA ATPase; exodeoxyribonuclease V subunit alpha 963517..965343 Escherichia coli KO11FL 11779365 YP_005276628.1 CDS EKO11_0923 NC_016902.1 965405 966736 R TIGRFAM: amino-acid N-acetyltransferase; KEGG: sbo:SBO_2708 N-acetylglutamate synthase; PFAM: aspartate/glutamate/uridylate kinase; GCN5-related N-acetyltransferase; amino-acid N-acetyltransferase complement(965405..966736) Escherichia coli KO11FL 11775882 YP_005276629.1 CDS EKO11_0924 NC_016902.1 966968 968221 D KEGG: sbc:SbBS512_E3045 N-acetylmuramoyl-L-alanine amidase AmiC; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; cell wall hydrolase/autolysin 966968..968221 Escherichia coli KO11FL 11775883 YP_005276630.1 CDS EKO11_0925 NC_016902.1 968567 969115 R KEGG: mag:amb0993 transcriptional regulatory protein; hypothetical protein complement(968567..969115) Escherichia coli KO11FL 11775884 YP_005276631.1 CDS EKO11_0926 NC_016902.1 969180 970556 R PFAM: ImpA-like; ImpA domain protein; KEGG: eoh:ECO103_3375 hypothetical protein; ImpA domain-containing protein complement(969180..970556) Escherichia coli KO11FL 11775885 YP_005276632.1 CDS EKO11_0927 NC_016902.1 970556 970984 R KEGG: eoh:ECO103_3374 hypothetical protein; TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; type VI secretion system lysozyme-like protein complement(970556..970984) Escherichia coli KO11FL 11775886 YP_005276633.1 CDS EKO11_0928 NC_016902.1 970988 971524 R TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: eoh:ECO103_3373 hypothetical protein; type VI secretion lipoprotein complement(970988..971524) Escherichia coli KO11FL 11775887 YP_005276634.1 CDS EKO11_0929 NC_016902.1 971505 972584 R KEGG: eoh:ECO103_3372 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; type VI secretion protein complement(971505..972584) Escherichia coli KO11FL 11775888 YP_005276635.1 CDS EKO11_0930 NC_016902.1 972548 974308 R KEGG: eoh:ECO103_3371 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; type VI secretion protein complement(972548..974308) Escherichia coli KO11FL 11775889 YP_005276636.1 CDS EKO11_0931 NC_016902.1 974868 975290 R KEGG: cbe:Cbei_1210 sporulation protein YlmC/YmxH; hypothetical protein complement(974868..975290) Escherichia coli KO11FL 11775890 YP_005276637.1 CDS EKO11_0933 NC_016902.1 976316 976627 D PFAM: transposase IS3/IS911 family protein; KEGG: eoh:ECO103_3642 putative IS602 transposase OrfA; transposase IS3/IS911 family protein 976316..976627 Escherichia coli KO11FL 11775891 YP_005276638.1 CDS EKO11_0935 NC_016902.1 977968 979326 R KEGG: eoh:ECO103_3369 hypothetical protein; TIGRFAM: type VI secretion-associated protein, VC_A0119 family; PFAM: ImpA domain protein; type VI secretion-associated protein complement(977968..979326) Escherichia coli KO11FL 11775893 YP_005276639.1 CDS EKO11_0937 NC_016902.1 979871 979978 R KEGG: ypy:YPK_0623 hypothetical protein; hypothetical protein complement(979871..979978) Escherichia coli KO11FL 11775895 YP_005276640.1 CDS EKO11_0938 NC_016902.1 980428 981345 R KEGG: eoh:ECO103_3370 hypothetical protein; hypothetical protein complement(980428..981345) Escherichia coli KO11FL 11775896 YP_005276641.1 CDS EKO11_0939 NC_016902.1 981351 982988 R KEGG: eoh:ECO103_3369 hypothetical protein; TIGRFAM: type VI secretion-associated protein, VC_A0119 family; PFAM: ImpA domain protein; type VI secretion-associated protein complement(981351..982988) Escherichia coli KO11FL 11775897 YP_005276642.1 CDS EKO11_0940 NC_016902.1 982954 986343 R PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: eoh:ECO103_3368 hypothetical protein; ImcF domain-containing protein complement(982954..986343) Escherichia coli KO11FL 11779366 YP_005276643.1 CDS EKO11_0941 NC_016902.1 986343 987557 R KEGG: eoh:ECO103_3367 hypothetical protein; hypothetical protein complement(986343..987557) Escherichia coli KO11FL 11779367 YP_005276644.1 CDS EKO11_0942 NC_016902.1 987635 988117 R KEGG: eoh:ECO103_3366 hypothetical protein; hypothetical protein complement(987635..988117) Escherichia coli KO11FL 11775898 YP_005276645.1 CDS EKO11_0944 NC_016902.1 988810 991317 R KEGG: eoh:ECO103_3364 hypothetical protein; TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein; PFAM: Protein of unknown function DUF2345; Rhs element Vgr protein complement(988810..991317) Escherichia coli KO11FL 11775899 YP_005276646.1 CDS EKO11_0945 NC_016902.1 991642 992178 R KEGG: pmm:PMM1081 4-alpha-glucanotransferase; hypothetical protein complement(991642..992178) Escherichia coli KO11FL 11775900 YP_005276647.1 CDS EKO11_0946 NC_016902.1 992168 993019 R KEGG: abm:p2ABSDF0021 hypothetical protein; hypothetical protein complement(992168..993019) Escherichia coli KO11FL 11775901 YP_005276648.1 CDS EKO11_0947 NC_016902.1 993021 995507 R KEGG: eoh:ECO103_3364 hypothetical protein; TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein; PFAM: Protein of unknown function DUF2345; Rhs element Vgr protein complement(993021..995507) Escherichia coli KO11FL 11779369 YP_005276649.1 CDS EKO11_0948 NC_016902.1 995519 998164 R TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: eoh:ECO103_3363 putative ATP-dependent Clp proteinase ATP-binding chain; SMART: AAA ATPase; type VI secretion ATPase, ClpV1 family complement(995519..998164) Escherichia coli KO11FL 11775902 YP_005276650.1 CDS EKO11_0949 NC_016902.1 998355 998846 R KEGG: eoh:ECO103_3362 Hcp-like protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; type VI secretion system effector complement(998355..998846) Escherichia coli KO11FL 11775903 YP_005276651.1 CDS EKO11_0950 NC_016902.1 998904 1000556 R PFAM: OmpA/MotB domain protein; KEGG: eoh:ECO103_3361 putative outer membrane lipoprotein; OmpA/MotB domain-containing protein complement(998904..1000556) Escherichia coli KO11FL 11775904 YP_005276652.1 CDS EKO11_0951 NC_016902.1 1000569 1001234 R KEGG: eoh:ECO103_3360 hypothetical protein; TIGRFAM: type IV / VI secretion system protein, DotU family; PFAM: Type IV / VI secretion system, DotU; DotU family type IV / VI secretion system protein complement(1000569..1001234) Escherichia coli KO11FL 11775905 YP_005276653.1 CDS EKO11_0952 NC_016902.1 1001231 1002568 R KEGG: eoh:ECO103_3359 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; type VI secretion protein complement(1001231..1002568) Escherichia coli KO11FL 11775906 YP_005276654.1 CDS EKO11_0953 NC_016902.1 1002586 1004124 R KEGG: eoh:ECO103_3358 hypothetical protein; TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; type VI secretion protein EvpB complement(1002586..1004124) Escherichia coli KO11FL 11775907 YP_005276655.1 CDS EKO11_0954 NC_016902.1 1004183 1004683 R KEGG: eoh:ECO103_3357 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: Uncharacterised conserved protein UCP028301; type VI secretion protein complement(1004183..1004683) Escherichia coli KO11FL 11775908 YP_005276656.1 CDS EKO11_0956 NC_016902.1 1006777 1007583 D PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: ssn:SSON_2969 putative enzyme; UBA/THIF-type NAD/FAD binding protein 1006777..1007583 Escherichia coli KO11FL 11775911 YP_005276657.1 CDS EKO11_0957 NC_016902.1 1007634 1008077 R KEGG: ssn:SSON_2968 hypothetical protein; TIGRFAM: cysteine desulfurase, sulfur acceptor subunit CsdE; PFAM: Fe-S metabolism associated SufE; cysteine desulfurase, sulfur acceptor subunit CsdE complement(1007634..1008077) Escherichia coli KO11FL 11775912 YP_005276658.1 CDS EKO11_0958 NC_016902.1 1008077 1009282 R PFAM: aminotransferase class V; KEGG: ssn:SSON_2967 cysteine sulfinate desulfinase; class V aminotransferase complement(1008077..1009282) Escherichia coli KO11FL 11775913 YP_005276659.1 CDS EKO11_0959 NC_016902.1 1009474 1009701 D PFAM: protein of unknown function DUF903; KEGG: sdy:SDY_3027 hypothetical protein; hypothetical protein 1009474..1009701 Escherichia coli KO11FL 11779370 YP_005276660.1 CDS EKO11_0960 NC_016902.1 1010052 1010969 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sbc:SbBS512_E3062 DNA-binding transcriptional activator GcvA; LysR family transcriptional regulator 1010052..1010969 Escherichia coli KO11FL 11779371 YP_005276661.1 CDS EKO11_0961 NC_016902.1 1010988 1011383 D PFAM: protein of unknown function DUF423; KEGG: sdy:SDY_3025 hypothetical protein; hypothetical protein 1010988..1011383 Escherichia coli KO11FL 11775914 YP_005276662.1 CDS EKO11_0962 NC_016902.1 1011376 1012476 D PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: ebd:ECBD_0916 putative RNA 2'-O-ribose methyltransferase; ribosomal RNA methyltransferase RrmJ/FtsJ 1011376..1012476 Escherichia coli KO11FL 11775915 YP_005276663.1 CDS EKO11_0963 NC_016902.1 1012520 1013251 R KEGG: ssn:SSON_2962 DNA-binding transcriptional activator FucR; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator complement(1012520..1013251) Escherichia coli KO11FL 11779372 YP_005276664.1 CDS EKO11_0964 NC_016902.1 1013309 1013731 R PFAM: RbsD or FucU transport; KEGG: sdy:SDY_3022 protein of fucose operon; transport protein RbsD/FucU complement(1013309..1013731) Escherichia coli KO11FL 11775916 YP_005276665.1 CDS EKO11_0965 NC_016902.1 1013733 1015181 R manually curated; TIGRFAM: L-fuculokinase; KEGG: eoi:ECO111_3528 L-fuculokinase; PFAM: Carbohydrate kinase, FGGY-like; L-fuculokinase complement(1013733..1015181) Escherichia coli KO11FL 11775917 YP_005276666.1 CDS EKO11_0966 NC_016902.1 1015260 1017035 R TIGRFAM: L-fucose isomerase; KEGG: sfv:SFV_2881 L-fucose isomerase; PFAM: L-fucose isomerase-like-like; L-fucose isomerase _1 domain protein; L-fucose isomerase _2 domain protein; L-fucose isomerase complement(1015260..1017035) Escherichia coli KO11FL 11779373 YP_005276667.1 CDS EKO11_0967 NC_016902.1 1017068 1018384 R KEGG: eoh:ECO103_3344 L-fucose transporter; TIGRFAM: L-fucose transporter; PFAM: major facilitator superfamily MFS_1; L-fucose transporter complement(1017068..1018384) Escherichia coli KO11FL 11775918 YP_005276668.1 CDS EKO11_0968 NC_016902.1 1018931 1019578 D KEGG: eok:G2583_3453 L-fuculose phosphate aldolase; TIGRFAM: L-fuculose phosphate aldolase; PFAM: class II aldolase/adducin family protein; L-fuculose phosphate aldolase 1018931..1019578 Escherichia coli KO11FL 11775919 YP_005276669.1 CDS EKO11_0969 NC_016902.1 1019606 1020754 D KEGG: eok:G2583_3452 lactaldehyde reductase; TIGRFAM: lactaldehyde reductase; PFAM: iron-containing alcohol dehydrogenase; lactaldehyde reductase 1019606..1020754 Escherichia coli KO11FL 11775920 YP_005276670.1 CDS EKO11_0970 NC_016902.1 1020809 1021654 R KEGG: sdy:SDY_3015 exonuclease IX; PFAM: 5'-3' exonuclease, SAM-fold domain; 5'-3' exonuclease, N-terminal resolvase-like domain; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; 5'-3' exonuclease complement(1020809..1021654) Escherichia coli KO11FL 11775921 YP_005276671.1 CDS EKO11_0971 NC_016902.1 1021676 1023043 R TIGRFAM: L-serine dehydratase 1; KEGG: sbc:SbBS512_E3075 L-serine ammonia-lyase 2; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 1 complement(1021676..1023043) Escherichia coli KO11FL 11775922 YP_005276672.1 CDS EKO11_0972 NC_016902.1 1023101 1024390 R TIGRFAM: serine transporter; KEGG: sbo:SBO_2677 serine transporter; serine transporter complement(1023101..1024390) Escherichia coli KO11FL 11775923 YP_005276673.1 CDS EKO11_0973 NC_016902.1 1024947 1026311 R PFAM: Conserved hypothetical protein CHP00730; KEGG: sbo:SBO_2676 hypothetical protein; hypothetical protein complement(1024947..1026311) Escherichia coli KO11FL 11775924 YP_005276674.1 CDS EKO11_0974 NC_016902.1 1026423 1027271 R TIGRFAM: 7-cyano-7-deazaguanine reductase; KEGG: sbc:SbBS512_E3078 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; 7-cyano-7-deazaguanine reductase complement(1026423..1027271) Escherichia coli KO11FL 11775925 YP_005276675.1 CDS EKO11_0975 NC_016902.1 1027339 1027884 D PFAM: Syd family protein; KEGG: sbo:SBO_2674 SecY interacting protein Syd; Syd family protein 1027339..1027884 Escherichia coli KO11FL 11775926 YP_005276676.1 CDS EKO11_0976 NC_016902.1 1028506 1028835 D PFAM: protein of unknown function DUF446; KEGG: sdy:SDY_3009 hypothetical protein; hypothetical protein 1028506..1028835 Escherichia coli KO11FL 11775927 YP_005276677.1 CDS EKO11_0977 NC_016902.1 1028835 1029617 D PFAM: pseudouridine synthase; KEGG: eoh:ECO103_3334 tRNA pseudouridine synthase C; pseudouridine synthase 1028835..1029617 Escherichia coli KO11FL 11775928 YP_005276678.1 CDS EKO11_0978 NC_016902.1 1029635 1030084 D PFAM: flavodoxin/nitric oxide synthase; KEGG: sdy:SDY_3007 flavodoxin; flavodoxin/nitric oxide synthase 1029635..1030084 Escherichia coli KO11FL 11775929 YP_005276679.1 CDS EKO11_0979 NC_016902.1 1030519 1031871 D KEGG: ebd:ECBD_0940 D-galactonate transporter; TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1; d-galactonate transporter 1030519..1031871 Escherichia coli KO11FL 11775930 YP_005276680.1 CDS EKO11_0980 NC_016902.1 1031873 1033213 D PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ssn:SSON_2945 putative glucarate dehydratase; mandelate racemase/muconate lactonizing protein 1031873..1033213 Escherichia coli KO11FL 11775931 YP_005276681.1 CDS EKO11_0981 NC_016902.1 1033234 1034574 D TIGRFAM: glucarate dehydratase; KEGG: eoh:ECO103_3330 (D)-glucarate dehydratase 1; PFAM: Mandelate racemase/muconate lactonizing protein; glucarate dehydratase 1033234..1034574 Escherichia coli KO11FL 11775932 YP_005276682.1 CDS EKO11_0983 NC_016902.1 1037619 1038920 D KEGG: sbo:SBO_2666 23S rRNA 5-methyluridine methyltransferase; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; TrmA family RNA methyltransferase 1037619..1038920 Escherichia coli KO11FL 11775933 YP_005276683.1 CDS EKO11_0984 NC_016902.1 1038968 1041202 D TIGRFAM: RelA/SpoT family protein; KEGG: sdy:SDY_3001 GDP/GTP pyrophosphokinase; PFAM: RelA/SpoT domain protein; TGS domain-containing protein; amino acid-binding ACT domain protein; (p)ppGpp synthetase I SpoT/RelA 1038968..1041202 Escherichia coli KO11FL 11775934 YP_005276684.1 CDS EKO11_0985 NC_016902.1 1041280 1041528 D PFAM: SpoVT/AbrB domain-containing protein; KEGG: sdy:SDY_3000 antitoxin MazE; transcriptional regulator/antitoxin MazE 1041280..1041528 Escherichia coli KO11FL 11775935 YP_005276685.1 CDS EKO11_0986 NC_016902.1 1041528 1041863 D PFAM: PemK family protein; KEGG: sdy:SDY_2999 toxin ChpA; transcriptional modulator of MazE/toxin MazF 1041528..1041863 Escherichia coli KO11FL 11775936 YP_005276686.1 CDS EKO11_0987 NC_016902.1 1041934 1042725 D KEGG: sbc:SbBS512_E3092 nucleoside triphosphate pyrophosphohydrolase; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; MazG family protein 1041934..1042725 Escherichia coli KO11FL 11779375 YP_005276687.1 CDS EKO11_0988 NC_016902.1 1042953 1044590 D TIGRFAM: CTP synthase; KEGG: sdy:SDY_2997 CTP synthetase; PFAM: CTP synthase-like; glutamine amidotransferase class-I; CTP synthase 1042953..1044590 Escherichia coli KO11FL 11775937 YP_005276688.1 CDS EKO11_0989 NC_016902.1 1044678 1045976 D TIGRFAM: enolase; KEGG: sdy:SDY_2996 phosphopyruvate hydratase; PFAM: Enolase-like; enolase 1044678..1045976 Escherichia coli KO11FL 11775938 YP_005276689.1 CDS EKO11_0990 NC_016902.1 1046036 1046908 R PFAM: protein of unknown function DUF477; KEGG: eoi:ECO111_3502 hypothetical protein; hypothetical protein complement(1046036..1046908) Escherichia coli KO11FL 11775939 YP_005276690.1 CDS EKO11_0991 NC_016902.1 1046922 1047062 R KEGG: ebd:ECBD_0952 hypothetical protein; hypothetical protein complement(1046922..1047062) Escherichia coli KO11FL 11775940 YP_005276691.1 CDS EKO11_0992 NC_016902.1 1047201 1047872 D PFAM: Radical SAM domain protein; KEGG: sdy:SDY_2981 hypothetical protein; radical SAM protein 1047201..1047872 Escherichia coli KO11FL 11779376 YP_005276692.1 CDS EKO11_0993 NC_016902.1 1049490 1050968 R PFAM: Carbohydrate kinase, FGGY-like; KEGG: eoh:ECO103_3319 putative kinase; Carbohydrate kinase, FGGY-like protein complement(1049490..1050968) Escherichia coli KO11FL 11775941 YP_005276693.1 CDS EKO11_0994 NC_016902.1 1050995 1052272 R PFAM: major facilitator superfamily MFS_1; KEGG: eoh:ECO103_3318 putative transporter; major facilitator superfamily protein complement(1050995..1052272) Escherichia coli KO11FL 11775942 YP_005276694.1 CDS EKO11_0995 NC_016902.1 1052591 1053376 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ebd:ECBD_0956 short-chain dehydrogenase/reductase SDR; short-chain dehydrogenase/reductase SDR 1052591..1053376 Escherichia coli KO11FL 11775943 YP_005276695.1 CDS EKO11_0996 NC_016902.1 1053446 1054900 D KEGG: eoh:ECO103_3316 putative FAD containing dehydrogenase; PFAM: FAD linked oxidase domain protein; alkylglycerone-phosphate synthase 1053446..1054900 Escherichia coli KO11FL 11775944 YP_005276696.1 CDS EKO11_0997 NC_016902.1 1054922 1056331 D PFAM: major facilitator superfamily MFS_1; KEGG: ebd:ECBD_0958 major facilitator superfamily MFS_1; major facilitator superfamily protein 1054922..1056331 Escherichia coli KO11FL 11775945 YP_005276697.1 CDS EKO11_0998 NC_016902.1 1056309 1057088 D KEGG: ssn:SSON_2923 putative transport protein; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SMART: Electron transfer flavoprotein alpha/beta-subunit; electron transfer flavoprotein subunit alpha/beta 1056309..1057088 Escherichia coli KO11FL 11775946 YP_005276698.1 CDS EKO11_0999 NC_016902.1 1057085 1057945 D PFAM: Electron transfer flavoprotein alpha subunit ; Electron transfer flavoprotein alpha/beta-subunit; KEGG: ssn:SSON_2922 putative flavoprotein; electron transfer flavoprotein subunit alpha 1057085..1057945 Escherichia coli KO11FL 11775947 YP_005276699.1 CDS EKO11_1000 NC_016902.1 1058093 1058668 R PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: ebd:ECBD_0961 glycerol-3-phosphate responsive antiterminator, GlpP; glycerol-3-phosphate responsive antiterminator GlpP complement(1058093..1058668) Escherichia coli KO11FL 11775948 YP_005276700.1 CDS EKO11_1001 NC_016902.1 1058685 1058945 R KEGG: ssn:SSON_2920 hypothetical protein; hypothetical protein complement(1058685..1058945) Escherichia coli KO11FL 11775949 YP_005276701.1 CDS EKO11_1002 NC_016902.1 1058936 1060207 R PFAM: FAD dependent oxidoreductase; KEGG: ssn:SSON_2919 hypothetical protein; FAD dependent oxidoreductase complement(1058936..1060207) Escherichia coli KO11FL 11775950 YP_005276702.1 CDS EKO11_1003 NC_016902.1 1060285 1060734 R PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; manually curated; KEGG: sfv:SFV_2740 putative 6-pyruvoyl tetrahydrobiopterin synthase; TIGRFAM: 6-pyruvoyl tetrahydropterin synthase; 6-pyruvoyl-tetrahydropterin synthase complement(1060285..1060734) Escherichia coli KO11FL 11775951 YP_005276703.1 CDS EKO11_1004 NC_016902.1 1060966 1062765 D KEGG: eoj:ECO26_3835 sulfite reductase subunit alpha; TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha chain; PFAM: FAD-binding domain protein; flavodoxin/nitric oxide synthase; oxidoreductase FAD/NAD(P)-binding domain protein; sulfite reductase (NADPH) flavoprotein, alpha chain 1060966..1062765 Escherichia coli KO11FL 11775952 YP_005276704.1 CDS EKO11_1005 NC_016902.1 1062765 1064477 D KEGG: sbc:SbBS512_E3112 sulfite reductase subunit beta; TIGRFAM: sulfite reductase (NADPH) hemoprotein, beta-component; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; sulfite reductase (NADPH) hemoprotein subunit beta 1062765..1064477 Escherichia coli KO11FL 11775953 YP_005276705.1 CDS EKO11_1006 NC_016902.1 1064551 1065285 D KEGG: eoi:ECO111_3487 phosphoadenosine phosphosulfate reductase; TIGRFAM: phosphoadenosine phosphosulfate reductase; PFAM: phosphoadenosine phosphosulfate reductase; phosphoadenosine phosphosulfate reductase 1064551..1065285 Escherichia coli KO11FL 11775954 YP_005276706.1 CDS EKO11_1007 NC_016902.1 1065550 1065702 D PFAM: Hok/gef cell toxic protein; KEGG: sbc:SbBS512_E3114 hok/gef family protein; Hok/gef cell toxic protein 1065550..1065702 Escherichia coli KO11FL 11779377 YP_005276707.1 CDS EKO11_1008 NC_016902.1 1065897 1068596 D KEGG: eoi:ECO111_3485 putative helicase; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated HD domain protein; SMART: DEAD-like helicase; CRISPR-associated helicase Cas3 1065897..1068596 Escherichia coli KO11FL 11775955 YP_005276708.1 CDS EKO11_1009 NC_016902.1 1068694 1070256 D KEGG: eoj:ECO26_3829 hypothetical protein; TIGRFAM: CRISPR-associated protein, Cse1 family; PFAM: CRISPR-associated protein Cse1; Cse1 family CRISPR-associated protein 1068694..1070256 Escherichia coli KO11FL 11775956 YP_005276709.1 CDS EKO11_1010 NC_016902.1 1070253 1070792 D KEGG: eoi:ECO111_3483 hypothetical protein; TIGRFAM: CRISPR-associated protein, Cse2 family; PFAM: CRISPR-associated protein Cse2; Cse2 family CRISPR-associated protein 1070253..1070792 Escherichia coli KO11FL 11775957 YP_005276710.1 CDS EKO11_1011 NC_016902.1 1070804 1071859 D KEGG: eoi:ECO111_3482 hypothetical protein; TIGRFAM: CRISPR-associated protein, Cse4 family; PFAM: CRISPR-associated protein CT1975; CRISPR-associated protein, Cse4 family 1070804..1071859 Escherichia coli KO11FL 11775958 YP_005276711.1 CDS EKO11_1012 NC_016902.1 1071870 1072616 D KEGG: eok:G2583_3405 CRISPR-associated protein Cas5; TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; PFAM: CRISPR-associated protein, Cas5; CRISPR-associated protein Cas5 family 1071870..1072616 Escherichia coli KO11FL 11779378 YP_005276712.1 CDS EKO11_1013 NC_016902.1 1072598 1073248 D KEGG: eok:G2583_3404 CRISPR-associated protein, CSE3 family; TIGRFAM: CRISPR-associated protein, Cse3 family; PFAM: CRISPR-associated protein CT1974; CRISPR-associated protein, Cse3 family 1072598..1073248 Escherichia coli KO11FL 11775959 YP_005276713.1 CDS EKO11_1014 NC_016902.1 1073245 1074165 D KEGG: sbo:SBO_2765 hypothetical protein; TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; CRISPR-associated protein Cas1 1073245..1074165 Escherichia coli KO11FL 11775960 YP_005276714.1 CDS EKO11_1015 NC_016902.1 1074165 1074458 D KEGG: sbc:SbBS512_E3120 hypothetical protein; TIGRFAM: CRISPR-associated protein Cas2; PFAM: CRISPR-associated protein Cas2; CRISPR-associated protein Cas2 1074165..1074458 Escherichia coli KO11FL 11775961 YP_005276715.1 CDS EKO11_1016 NC_016902.1 1075519 1076556 R PFAM: peptidase M28; KEGG: sbc:SbBS512_E3121 alkaline phosphatase isozyme conversion aminopeptidase; peptidase M28 complement(1075519..1076556) Escherichia coli KO11FL 11775962 YP_005276716.1 CDS EKO11_1017 NC_016902.1 1076808 1077716 D KEGG: sfv:SFV_2746 sulfate adenylyltransferase subunit 2; TIGRFAM: sulfate adenylyltransferase, small subunit; PFAM: phosphoadenosine phosphosulfate reductase; sulfate adenylyltransferase, small subunit 1076808..1077716 Escherichia coli KO11FL 11775963 YP_005276717.1 CDS EKO11_1018 NC_016902.1 1077718 1079145 D TIGRFAM: sulfate adenylyltransferase, large subunit; KEGG: ssn:SSON_2899 sulfate adenylyltransferase subunit 1; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; sulfate adenylyltransferase, large subunit 1077718..1079145 Escherichia coli KO11FL 11775964 YP_005276718.1 CDS EKO11_1019 NC_016902.1 1079145 1079750 D TIGRFAM: adenylylsulfate kinase; KEGG: sdy:SDY_2949 adenylylsulfate kinase; PFAM: adenylylsulfate kinase; adenylylsulfate kinase 1079145..1079750 Escherichia coli KO11FL 11775965 YP_005276719.1 CDS EKO11_1020 NC_016902.1 1079800 1080123 D KEGG: sdy:SDY_2948 hypothetical protein; hypothetical protein 1079800..1080123 Escherichia coli KO11FL 11775966 YP_005276720.1 CDS EKO11_1021 NC_016902.1 1080317 1080628 D PFAM: Septum formation initiator; KEGG: sdy:SDY_2947 cell division protein FtsB; septum formation initiator 1080317..1080628 Escherichia coli KO11FL 11775967 YP_005276721.1 CDS EKO11_1022 NC_016902.1 1080647 1081357 D KEGG: sdy:SDY_2946 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1080647..1081357 Escherichia coli KO11FL 11775968 YP_005276722.1 CDS EKO11_1023 NC_016902.1 1081357 1081836 D KEGG: sdy:SDY_2945 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 1081357..1081836 Escherichia coli KO11FL 11775969 YP_005276723.1 CDS EKO11_1024 NC_016902.1 1081833 1082882 D PFAM: tRNA pseudouridine synthase D TruD; KEGG: sdy:SDY_2944 tRNA pseudouridine synthase D; tRNA pseudouridine synthase D TruD 1081833..1082882 Escherichia coli KO11FL 11775970 YP_005276724.1 CDS EKO11_1025 NC_016902.1 1082863 1083624 D KEGG: efe:EFER_0324 stationary phase survival protein SurE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE; stationary-phase survival protein SurE 1082863..1083624 Escherichia coli KO11FL 11775971 YP_005276725.1 CDS EKO11_1026 NC_016902.1 1083618 1084244 D TIGRFAM: protein-L-isoaspartate O-methyltransferase; KEGG: sdy:SDY_2942 protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 1083618..1084244 Escherichia coli KO11FL 11775972 YP_005276726.1 CDS EKO11_1027 NC_016902.1 1084384 1085523 D KEGG: ebd:ECBD_0982 lipoprotein NlpD; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; peptidase M23 1084384..1085523 Escherichia coli KO11FL 11779379 YP_005276727.1 CDS EKO11_1028 NC_016902.1 1085550 1086578 D manually curated; TIGRFAM: RNA polymerase sigma factor RpoS; RNA polymerase sigma factor, sigma-70 family; KEGG: sfl:SF2764 RNA polymerase sigma factor RpoS; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 4 domain protein; RpoD subfamily RNA polymerase sigma-70 subunit 1085550..1086578 Escherichia coli KO11FL 11775973 YP_005276728.1 CDS EKO11_1029 NC_016902.1 1086699 1087106 R KEGG: eoh:ECO103_3282 transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; MarR family transcriptional regulator complement(1086699..1087106) Escherichia coli KO11FL 11775974 YP_005276729.1 CDS EKO11_1030 NC_016902.1 1087253 1087846 D KEGG: sfx:S2955 phenylacrylic acid decarboxylase-like protein; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1087253..1087846 Escherichia coli KO11FL 11775975 YP_005276730.1 CDS EKO11_1031 NC_016902.1 1087846 1089273 D KEGG: eoj:ECO26_3807 putative 4-hydroxybenzoate decarboxylase; TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; UbiD family decarboxylase 1087846..1089273 Escherichia coli KO11FL 11775976 YP_005276731.1 CDS EKO11_1032 NC_016902.1 1089284 1089520 D KEGG: eoi:ECO111_3461 hypothetical protein; hypothetical protein 1089284..1089520 Escherichia coli KO11FL 11779380 YP_005276732.1 CDS EKO11_1033 NC_016902.1 1089559 1090923 R KEGG: eoh:ECO103_3278 inner membrane permease YgbN; TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; gluconate transporter complement(1089559..1090923) Escherichia coli KO11FL 11775977 YP_005276733.1 CDS EKO11_1034 NC_016902.1 1091012 1091788 R KEGG: eoi:ECO111_3459 hypothetical protein; PFAM: Xylose isomerase domain-containing protein TIM barrel; Hydroxypyruvate isomerase complement(1091012..1091788) Escherichia coli KO11FL 11775978 YP_005276734.1 CDS EKO11_1035 NC_016902.1 1091793 1092431 R PFAM: class II aldolase/adducin family protein; KEGG: sbc:SbBS512_E3136 putative aldolase; class II aldolase/adducin family protein complement(1091793..1092431) Escherichia coli KO11FL 11775979 YP_005276735.1 CDS EKO11_1036 NC_016902.1 1092428 1093690 R PFAM: type III effector Hrp-dependent outers; KEGG: eoj:ECO26_3802 hypothetical protein; type III effector Hrp-dependent outer complement(1092428..1093690) Escherichia coli KO11FL 11775980 YP_005276736.1 CDS EKO11_1037 NC_016902.1 1093687 1094595 R KEGG: sbc:SbBS512_E3138 NAD binding domain of 6-phosphogluconate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 2-hydroxy-3-oxopropionate reductase complement(1093687..1094595) Escherichia coli KO11FL 11775981 YP_005276737.1 CDS EKO11_1038 NC_016902.1 1094791 1095558 D KEGG: sbo:SBO_2785 putative DeoR-type transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator 1094791..1095558 Escherichia coli KO11FL 11775982 YP_005276738.1 CDS EKO11_1039 NC_016902.1 1095609 1096265 R PFAM: metallophosphoesterase; KEGG: eoh:ECO103_3272 serine/threonine-specific protein phosphatase 2; metallophosphoesterase complement(1095609..1096265) Escherichia coli KO11FL 11775983 YP_005276739.1 CDS EKO11_1040 NC_016902.1 1096371 1098932 R TIGRFAM: DNA mismatch repair protein MutS; PFAM: MutS III domain protein; DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein; KEGG: eok:G2583_3383 DNA mismatch repair protein MutS; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; DNA mismatch repair protein MutS complement(1096371..1098932) Escherichia coli KO11FL 11775984 YP_005276740.1 CDS EKO11_1041 NC_016902.1 1099008 1099187 D KEGG: ebd:ECBD_0992 hypothetical protein; hypothetical protein 1099008..1099187 Escherichia coli KO11FL 11775985 YP_005276741.1 CDS EKO11_1042 NC_016902.1 1099219 1099572 D KEGG: sbc:SbBS512_E3145 hypothetical protein; hypothetical protein 1099219..1099572 Escherichia coli KO11FL 11775986 YP_005276742.1 CDS EKO11_1043 NC_016902.1 1099609 1101687 R KEGG: eok:G2583_3380 formate hydrogenlyase transcriptional activator; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase; GAF domain protein; Fis family NifA subfamily transcriptional regulator complement(1099609..1101687) Escherichia coli KO11FL 11775987 YP_005276743.1 CDS EKO11_1044 NC_016902.1 1101761 1102771 R KEGG: eok:G2583_3379 hydrogenase maturation factor; TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; hydrogenase expression/formation protein HypE complement(1101761..1102771) Escherichia coli KO11FL 11775988 YP_005276744.1 CDS EKO11_1045 NC_016902.1 1102768 1103889 R KEGG: sbc:SbBS512_E3148 hydrogenase expression/formation protein HypD; TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; hydrogenase expression/formation protein HypD complement(1102768..1103889) Escherichia coli KO11FL 11775989 YP_005276745.1 CDS EKO11_1046 NC_016902.1 1103889 1104161 R KEGG: sdy:SDY_2925 hydrogenase assembly chaperone; TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); hydrogenase assembly chaperone HypC/HupF complement(1103889..1104161) Escherichia coli KO11FL 11775990 YP_005276746.1 CDS EKO11_1047 NC_016902.1 1104152 1105024 R KEGG: sbc:SbBS512_E3150 hydrogenase nickel incorporation protein HypB; TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K; hydrogenase nickel incorporation protein HypB complement(1104152..1105024) Escherichia coli KO11FL 11779381 YP_005276747.1 CDS EKO11_1048 NC_016902.1 1105028 1105378 R KEGG: ssn:SSON_2873 hydrogenase nickel incorporation protein; TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis HypA; hydrogenase nickel incorporation protein HypA complement(1105028..1105378) Escherichia coli KO11FL 11775991 YP_005276748.1 CDS EKO11_1049 NC_016902.1 1105590 1106051 D KEGG: sfv:SFV_2778 formate hydrogenlyase regulatory protein HycA; formate hydrogenlyase regulatory protein HycA 1105590..1106051 Escherichia coli KO11FL 11779382 YP_005276749.1 CDS EKO11_1050 NC_016902.1 1106176 1106787 D KEGG: sdy:SDY_2921 small subunit of hydrogenase-3, iron-sulfur protein; small subunit of hydrogenase-3, iron-sulfur protein 1106176..1106787 Escherichia coli KO11FL 11775992 YP_005276750.1 CDS EKO11_1051 NC_016902.1 1106784 1108610 D PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: ebd:ECBD_1002 formate hydrogenlyase subunit 3; NADH/ubiquinone/plastoquinone 1106784..1108610 Escherichia coli KO11FL 11775993 YP_005276751.1 CDS EKO11_1052 NC_016902.1 1108613 1109536 D PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: ebd:ECBD_1003 respiratory-chain NADH dehydrogenase subunit 1; respiratory-chain NADH dehydrogenase subunit 1 1108613..1109536 Escherichia coli KO11FL 11779383 YP_005276752.1 CDS EKO11_1053 NC_016902.1 1109554 1111263 D PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; nickel-dependent hydrogenase large subunit; NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: sbo:SBO_2797 large subunit of hydrogenase 3; NADH dehydrogenase (ubiquinone) 30 kDa subunit 1109554..1111263 Escherichia coli KO11FL 11775994 YP_005276753.1 CDS EKO11_1054 NC_016902.1 1111273 1111815 D KEGG: sbo:SBO_2798 formate hydrogenlyase complex iron-sulfur subunit; formate hydrogenlyase complex iron-sulfur subunit 1111273..1111815 Escherichia coli KO11FL 11775995 YP_005276754.1 CDS EKO11_1055 NC_016902.1 1111815 1112582 D PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: ebd:ECBD_1006 NADH ubiquinone oxidoreductase 20 kDa subunit; NADH ubiquinone oxidoreductase 20 kDa subunit 1111815..1112582 Escherichia coli KO11FL 11775996 YP_005276755.1 CDS EKO11_1056 NC_016902.1 1112579 1112989 D PFAM: formate hydrogenlyase maturation HycH; KEGG: sbc:SbBS512_E3158 formate hydrogenlyase maturation protein; formate hydrogenlyase maturation HycH 1112579..1112989 Escherichia coli KO11FL 11775997 YP_005276756.1 CDS EKO11_1057 NC_016902.1 1112982 1113452 D KEGG: sbc:SbBS512_E3159 hydrogenase 3 maturation protease; TIGRFAM: hydrogenase maturation protease HycI; hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; hydrogenase maturation protease HycI 1112982..1113452 Escherichia coli KO11FL 11775998 YP_005276757.1 CDS EKO11_1058 NC_016902.1 1113742 1114722 D KEGG: eoh:ECO103_4940 putative IS621 transposase; PFAM: transposase IS116/IS110/IS902 family protein; SMART: Helix-hairpin-helix DNA-binding class 1; transposase IS116/IS110/IS902 family protein 1113742..1114722 Escherichia coli KO11FL 11775999 YP_005276758.1 CDS EKO11_1059 NC_016902.1 1114890 1116314 R PFAM: glycoside hydrolase family 1; KEGG: ssn:SSON_2860 cryptic 6-phospho-beta-glucosidase; glycoside hydrolase complement(1114890..1116314) Escherichia coli KO11FL 11776000 YP_005276759.1 CDS EKO11_1060 NC_016902.1 1116323 1117780 R TIGRFAM: PTS system, maltose and glucose-specific subfamily, IIC subunit; KEGG: ssn:SSON_2859 PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; PTS system maltose and glucose-specific transporter subunit IIC complement(1116323..1117780) Escherichia coli KO11FL 11779384 YP_005276760.1 CDS EKO11_1061 NC_016902.1 1118037 1119050 D KEGG: eoh:ECO103_3249 DNA-binding transcriptional repressor AscG; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; LacI family transcriptional regulator 1118037..1119050 Escherichia coli KO11FL 11776001 YP_005276761.1 CDS EKO11_1062 NC_016902.1 1119184 1119726 D manually curated; KEGG: sbc:SbBS512_E3164 electron transport protein HydN; electron transport protein HydN 1119184..1119726 Escherichia coli KO11FL 11776002 YP_005276762.1 CDS EKO11_1063 NC_016902.1 1119879 1122131 D KEGG: eoh:ECO103_3247 carbamoyl phosphate phosphatase HypF; TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: SUA5/yciO/yrdC domain; acylphosphatase; (NiFe) hydrogenase maturation protein HypF 1119879..1122131 Escherichia coli KO11FL 11776003 YP_005276763.1 CDS EKO11_1064 NC_016902.1 1122357 1123490 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ebd:ECBD_1014 nitric oxide reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(1122357..1123490) Escherichia coli KO11FL 11776004 YP_005276764.1 CDS EKO11_1065 NC_016902.1 1123487 1124926 R PFAM: Rubredoxin-type Fe(Cys)4 protein; flavodoxin/nitric oxide synthase; KEGG: eok:G2583_3358 hypothetical protein; rubredoxin-type Fe(Cys)4 protein complement(1123487..1124926) Escherichia coli KO11FL 11779385 YP_005276765.1 CDS EKO11_1066 NC_016902.1 1125113 1126627 D KEGG: eoi:ECO111_3427 anaerobic nitric oxide reductase transcription regulator; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; SMART: GAF domain protein; AAA ATPase; sigma-54 interacting domain-containing protein 1125113..1126627 Escherichia coli KO11FL 11779386 YP_005276766.1 CDS EKO11_1067 NC_016902.1 1126624 1127589 R TIGRFAM: KpsF/GutQ family protein; KEGG: sbo:SBO_2810 D-arabinose 5-phosphate isomerase; PFAM: sugar isomerase (SIS); CBS domain containing protein; KpsF/GutQ family protein complement(1126624..1127589) Escherichia coli KO11FL 11776005 YP_005276767.1 CDS EKO11_1068 NC_016902.1 1127582 1128355 R KEGG: sfv:SFV_2798 DNA-bindng transcriptional repressor SrlR; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator complement(1127582..1128355) Escherichia coli KO11FL 11776006 YP_005276768.1 CDS EKO11_1069 NC_016902.1 1128422 1128781 R PFAM: Glucitol operon activator; KEGG: sbc:SbBS512_E3171 DNA-binding transcriptional activator GutM; glucitol operon activator complement(1128422..1128781) Escherichia coli KO11FL 11776007 YP_005276769.1 CDS EKO11_1070 NC_016902.1 1128886 1129665 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sdy:SDY_2902 sorbitol-6-phosphate dehydrogenase; short-chain dehydrogenase/reductase SDR complement(1128886..1129665) Escherichia coli KO11FL 11776008 YP_005276770.1 CDS EKO11_1071 NC_016902.1 1129669 1130040 R KEGG: sfv:SFV_2801 PTS system glucitol/sorbitol-specific transporter subunit IIA; TIGRFAM: PTS system, glucitol/sorbitol-specific IIA subunit; PFAM: PTS system glucitol/sorbitol-specific IIA component; PTS system glucitol/sorbitol-specific transporter subunit IIA complement(1129669..1130040) Escherichia coli KO11FL 11776009 YP_005276771.1 CDS EKO11_1072 NC_016902.1 1130051 1131010 R TIGRFAM: PTS system, glucitol/sorbitol-specific, IIBC subunit; KEGG: eoh:ECO103_3238 glucitol/sorbitol-specific enzyme IIB component; PFAM: Sorbitol phosphotransferase protein II domain-containing protein; PTS system glucitol/sorbitol-specific transporter subunit IIBC complement(1130051..1131010) Escherichia coli KO11FL 11776010 YP_005276772.1 CDS EKO11_1073 NC_016902.1 1131007 1131570 R KEGG: sdy:SDY_2898 PTS system, glucitol/sorbitol-specific IIC component; TIGRFAM: PTS system, glucitol/sorbitol-specific, IIC subunit; PFAM: PTS system protein II sorbitol-specific factor; PTS system glucitol/sorbitol-specific transporter subunit IIC complement(1131007..1131570) Escherichia coli KO11FL 11776011 YP_005276773.1 CDS EKO11_1074 NC_016902.1 1131721 1132911 D TIGRFAM: lytic murein transglycosylase B; KEGG: sfv:SFV_2804 murein hydrolase B; lytic murein transglycosylase B 1131721..1132911 Escherichia coli KO11FL 11776012 YP_005276774.1 CDS EKO11_1075 NC_016902.1 1133056 1133553 D PFAM: CinA domain protein; KEGG: sbo:SBO_2818 competence damage-inducible protein A; CinA domain-containing protein 1133056..1133553 Escherichia coli KO11FL 11776013 YP_005276775.1 CDS EKO11_1076 NC_016902.1 1133633 1134694 D TIGRFAM: recA protein; PFAM: RecA domain protein; KEGG: sdy:SDY_2895 recombinase A; SMART: AAA ATPase; recA protein 1133633..1134694 Escherichia coli KO11FL 11779387 YP_005276776.1 CDS EKO11_1077 NC_016902.1 1134937 1135437 D PFAM: regulatory protein RecX; KEGG: sfv:SFV_2807 recombination regulator RecX; regulatory protein RecX 1134937..1135437 Escherichia coli KO11FL 11776014 YP_005276777.1 CDS EKO11_1078 NC_016902.1 1135565 1138195 D KEGG: ssn:SSON_2841 alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; Threonyl/alanyl tRNA synthetase SAD; phosphoesterase DHHA1; alanyl-tRNA synthetase 1135565..1138195 Escherichia coli KO11FL 11776015 YP_005276778.1 CDS EKO11_1079 NC_016902.1 1138430 1138615 D KEGG: cro:ROD_31181 carbon storage regulator; TIGRFAM: carbon storage regulator; PFAM: carbon storage regulator; carbon storage regulator CsrA 1138430..1138615 Escherichia coli KO11FL 11776016 YP_005276779.1 CDS EKO11_1080 NC_016902.1 1140073 1140639 D KEGG: eok:G2583_3338 HAD-superfamily hydrolase, subfamily IA; TIGRFAM: beta-phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; beta-phosphoglucomutase family hydrolase 1140073..1140639 Escherichia coli KO11FL 11779388 YP_005276780.1 CDS EKO11_1081 NC_016902.1 1140636 1141064 D KEGG: sbo:SBO_2828 hypothetical protein; hypothetical protein 1140636..1141064 Escherichia coli KO11FL 11776022 YP_005276781.1 CDS EKO11_1082 NC_016902.1 1141137 1142693 D KEGG: sfv:SFV_2816 glutamate--cysteine ligase; TIGRFAM: glutamate/cysteine ligase; PFAM: glutamate--cysteine ligase; glutamate/cysteine ligase 1141137..1142693 Escherichia coli KO11FL 11776023 YP_005276782.1 CDS EKO11_1083 NC_016902.1 1142843 1143358 D KEGG: sdy:SDY_2884 S-ribosylhomocysteinase; PFAM: LuxS protein; quorum-sensing autoinducer 2 (AI-2), LuxS 1142843..1143358 Escherichia coli KO11FL 11776024 YP_005276783.1 CDS EKO11_1084 NC_016902.1 1143407 1144519 R KEGG: efe:EFER_0383 putative RNA related enzyme; putative RNA related enzyme complement(1143407..1144519) Escherichia coli KO11FL 11776025 YP_005276784.1 CDS EKO11_1085 NC_016902.1 1144516 1145223 R KEGG: sdy:SDY_2882 hypothetical protein; hypothetical protein complement(1144516..1145223) Escherichia coli KO11FL 11776026 YP_005276785.1 CDS EKO11_1086 NC_016902.1 1145481 1147019 R KEGG: ebd:ECBD_1034 drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA subfamily drug resistance transporter complement(1145481..1147019) Escherichia coli KO11FL 11776027 YP_005276786.1 CDS EKO11_1087 NC_016902.1 1147036 1148208 R KEGG: sbo:SBO_2832 multidrug resistance secretion protein; TIGRFAM: efflux pump membrane protein; PFAM: secretion protein HlyD family protein; efflux pump membrane protein complement(1147036..1148208) Escherichia coli KO11FL 11776028 YP_005276787.1 CDS EKO11_1088 NC_016902.1 1148335 1148865 R KEGG: sbc:SbBS512_E3192 transcriptional repressor MprA; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; regulatory protein MarR complement(1148335..1148865) Escherichia coli KO11FL 11776029 YP_005276788.1 CDS EKO11_1089 NC_016902.1 1148956 1149291 R KEGG: sbc:SbBS512_E3193 hypothetical protein; hypothetical protein complement(1148956..1149291) Escherichia coli KO11FL 11776030 YP_005276789.1 CDS EKO11_1090 NC_016902.1 1149281 1150018 R PFAM: AzlC family protein; KEGG: ssn:SSON_2826 hypothetical protein; AzlC family protein complement(1149281..1150018) Escherichia coli KO11FL 11779389 YP_005276790.1 CDS EKO11_1091 NC_016902.1 1150142 1151326 R PFAM: major facilitator superfamily MFS_1; KEGG: eoi:ECO111_3404 putative transporter; major facilitator superfamily protein complement(1150142..1151326) Escherichia coli KO11FL 11779390 YP_005276791.1 CDS EKO11_1092 NC_016902.1 1151618 1152610 R PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: ebd:ECBD_1040 glycine betaine transporter periplasmic subunit; glycine betaine ABC transporter substrate-binding protein complement(1151618..1152610) Escherichia coli KO11FL 11776031 YP_005276792.1 CDS EKO11_1093 NC_016902.1 1152668 1153732 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbc:SbBS512_E3201 glycine betaine transporter membrane protein; binding-protein-dependent transport system inner membrane protein complement(1152668..1153732) Escherichia coli KO11FL 11776032 YP_005276793.1 CDS EKO11_1094 NC_016902.1 1153725 1154927 R TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; CBS domain containing protein; KEGG: sbc:SbBS512_E3202 glycine betaine transporter ATP-binding subunit; SMART: AAA ATPase; glycine betaine/L-proline ABC transporter ATPase complement(1153725..1154927) Escherichia coli KO11FL 11776033 YP_005276794.1 CDS EKO11_1095 NC_016902.1 1155282 1156241 R KEGG: ssn:SSON_2821 ribonucleotide-diphosphate reductase subunit beta; PFAM: ribonucleotide reductase; ribonucleoside-diphosphate reductase complement(1155282..1156241) Escherichia coli KO11FL 11776034 YP_005276795.1 CDS EKO11_1096 NC_016902.1 1156251 1158395 R KEGG: eoh:ECO103_3216 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase domain protein; Ribonucleotide reductase large subunit domain protein; ribonucleoside-diphosphate reductase subunit alpha complement(1156251..1158395) Escherichia coli KO11FL 11776035 YP_005276796.1 CDS EKO11_1097 NC_016902.1 1158368 1158778 R KEGG: sbc:SbBS512_E3205 ribonucleotide reductase stimulatory protein; TIGRFAM: NrdI protein; PFAM: NrdI family protein; NrdI protein complement(1158368..1158778) Escherichia coli KO11FL 11776036 YP_005276797.1 CDS EKO11_1098 NC_016902.1 1158775 1159020 R KEGG: sbo:SBO_2844 glutaredoxin-like protein; TIGRFAM: glutaredoxin-like protein NrdH; PFAM: glutaredoxin; glutaredoxin-like protein NrdH complement(1158775..1159020) Escherichia coli KO11FL 11779391 YP_005276798.1 CDS EKO11_1099 NC_016902.1 1159268 1159597 R PFAM: protein of unknown function DUF883 ElaB; KEGG: sdy:SDY_2863 hypothetical protein; hypothetical protein complement(1159268..1159597) Escherichia coli KO11FL 11779392 YP_005276799.1 CDS EKO11_1100 NC_016902.1 1159749 1160093 D PFAM: Protein of unknown function DUF2002; KEGG: sbc:SbBS512_E3210 hypothetical protein; hypothetical protein 1159749..1160093 Escherichia coli KO11FL 11776037 YP_005276800.1 CDS EKO11_1101 NC_016902.1 1160130 1160579 R PFAM: protein of unknown function DUF1144; KEGG: sbc:SbBS512_E3211 hypothetical protein; hypothetical protein complement(1160130..1160579) Escherichia coli KO11FL 11776038 YP_005276801.1 CDS EKO11_1102 NC_016902.1 1161247 1161651 D KEGG: sdy:SDY_2859 DNA binding protein, nucleoid-associated; PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS; histone family protein nucleoid-structuring protein H-NS 1161247..1161651 Escherichia coli KO11FL 11776039 YP_005276802.1 CDS EKO11_1103 NC_016902.1 1161698 1162222 R SMART: Rhodanese domain protein; KEGG: ebw:BWG_2411 putative inner membrane protein with hydrolase activity; Rhodanese domain-containing protein complement(1161698..1162222) Escherichia coli KO11FL 11776040 YP_005276803.1 CDS EKO11_1104 NC_016902.1 1162232 1162531 R KEGG: sbo:SBO_2852 hypothetical protein; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; ArsR family transcriptional regulator complement(1162232..1162531) Escherichia coli KO11FL 11776041 YP_005276804.1 CDS EKO11_1105 NC_016902.1 1162714 1162872 D PFAM: protein of unknown function UPF0057; KEGG: sdy:SDY_2856 hypothetical protein; hypothetical protein 1162714..1162872 Escherichia coli KO11FL 11776042 YP_005276805.1 CDS EKO11_1106 NC_016902.1 1162956 1163405 D KEGG: sdy:SDY_2855 LysM domain/BON superfamily protein; PFAM: Peptidoglycan-binding lysin domain; transport-associated; SMART: Peptidoglycan-binding LysM; Transport-associated and nodulation region; peptidoglycan-binding lysin domain-containing protein 1162956..1163405 Escherichia coli KO11FL 11776043 YP_005276806.1 CDS EKO11_1107 NC_016902.1 1163406 1164068 R KEGG: sdy:SDY_2854 DNA-binding transcriptional regulator CsiR; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator complement(1163406..1164068) Escherichia coli KO11FL 11776044 YP_005276807.1 CDS EKO11_1108 NC_016902.1 1164089 1165489 R KEGG: eoh:ECO103_3204 gamma-aminobutyrate transporter; TIGRFAM: GABA permease; PFAM: amino acid permease-associated region; GABA permease complement(1164089..1165489) Escherichia coli KO11FL 11776045 YP_005276808.1 CDS EKO11_1109 NC_016902.1 1165726 1167006 R KEGG: ebd:ECBD_1057 4-aminobutyrate aminotransferase; TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; 4-aminobutyrate aminotransferase complement(1165726..1167006) Escherichia coli KO11FL 11776046 YP_005276809.1 CDS EKO11_1110 NC_016902.1 1167020 1168468 R KEGG: eok:G2583_3307 succinate-semialdehyde dehydrogenase (NAD(P)(+)); TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; succinate-semialdehyde dehydrogenase complement(1167020..1168468) Escherichia coli KO11FL 11776047 YP_005276810.1 CDS EKO11_1111 NC_016902.1 1168491 1169759 R PFAM: FAD dependent oxidoreductase; KEGG: ebd:ECBD_1059 hydroxyglutarate oxidase; FAD dependent oxidoreductase complement(1168491..1169759) Escherichia coli KO11FL 11776048 YP_005276811.1 CDS EKO11_1112 NC_016902.1 1169779 1170756 R PFAM: protein of unknown function CsiD; KEGG: ssn:SSON_2803 hypothetical protein; hypothetical protein complement(1169779..1170756) Escherichia coli KO11FL 11776049 YP_005276812.1 CDS EKO11_1113 NC_016902.1 1171092 1172135 R KEGG: ssn:SSON_2802 putative enzyme; manually curated; PFAM: alpha amylase all-beta; alpha amylase complement(1171092..1172135) Escherichia coli KO11FL 11776050 YP_005276813.1 CDS EKO11_1114 NC_016902.1 1172265 1172564 D PFAM: transposase IS3/IS911 family protein; KEGG: cro:ROD_49861 IS3 transposase A; transposase IS3/IS911 family protein 1172265..1172564 Escherichia coli KO11FL 11776051 YP_005276814.1 CDS EKO11_1115 NC_016902.1 1172561 1173427 D PFAM: Integrase catalytic region; KEGG: cro:ROD_49871 IS3 transposase B; integrase catalytic subunit 1172561..1173427 Escherichia coli KO11FL 11776052 YP_005276815.1 CDS EKO11_1116 NC_016902.1 1173579 1175297 D KEGG: eoi:ECO111_3380 putative histidine kinase-like protein; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; ATP-binding region ATPase domain-containing protein 1173579..1175297 Escherichia coli KO11FL 11776053 YP_005276816.1 CDS EKO11_1117 NC_016902.1 1175299 1177047 D KEGG: eoi:ECO111_3379 hypothetical protein; hypothetical protein 1175299..1177047 Escherichia coli KO11FL 11776054 YP_005276817.1 CDS EKO11_1118 NC_016902.1 1177119 1177535 R KEGG: eoh:ECO103_3196 hypothetical protein; hypothetical protein complement(1177119..1177535) Escherichia coli KO11FL 11779393 YP_005276818.1 CDS EKO11_1119 NC_016902.1 1177574 1178803 R PFAM: integrase family protein; KEGG: eoh:ECO103_3195 putative integrase; integrase family protein complement(1177574..1178803) Escherichia coli KO11FL 11776055 YP_005276819.1 CDS EKO11_1120 NC_016902.1 1179546 1180028 R KEGG: sdy:SDY_2793 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; SsrA-binding protein complement(1179546..1180028) Escherichia coli KO11FL 11776057 YP_005276820.1 CDS EKO11_1121 NC_016902.1 1180187 1180636 D PFAM: cyclase/dehydrase; KEGG: sdy:SDY_2792 hypothetical protein; cyclase/dehydrase 1180187..1180636 Escherichia coli KO11FL 11776058 YP_005276821.1 CDS EKO11_1122 NC_016902.1 1180626 1180916 D PFAM: protein of unknown function UPF0125; KEGG: sbc:SbBS512_E3007 hypothetical protein; hypothetical protein 1180626..1180916 Escherichia coli KO11FL 11776059 YP_005276822.1 CDS EKO11_1123 NC_016902.1 1180978 1181319 R PFAM: SmpA/OmlA domain-containing protein; KEGG: sdy:SDY_2790 hypothetical protein; SmpA/OmlA domain-containing protein complement(1180978..1181319) Escherichia coli KO11FL 11776060 YP_005276823.1 CDS EKO11_1124 NC_016902.1 1181468 1183129 R KEGG: ssn:SSON_2772 recombination and repair protein; TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; DNA repair protein RecN complement(1181468..1183129) Escherichia coli KO11FL 11776061 YP_005276824.1 CDS EKO11_1125 NC_016902.1 1183215 1184093 R PFAM: ATP-NAD/AcoX kinase; KEGG: sbc:SbBS512_E3004 inorganic polyphosphate/ATP-NAD kinase; ATP-NAD/AcoX kinase complement(1183215..1184093) Escherichia coli KO11FL 11776062 YP_005276825.1 CDS EKO11_1126 NC_016902.1 1184216 1184809 D PFAM: GrpE protein; KEGG: sdy:SDY_2787 heat shock protein GrpE; GrpE protein HSP-70 cofactor 1184216..1184809 Escherichia coli KO11FL 11776063 YP_005276826.1 CDS EKO11_1127 NC_016902.1 1184864 1186105 R PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: sbc:SbBS512_E3001 hypothetical protein; hypothetical protein complement(1184864..1186105) Escherichia coli KO11FL 11776064 YP_005276827.1 CDS EKO11_1128 NC_016902.1 1186171 1187037 R PFAM: cytochrome c assembly protein; KEGG: sdy:SDY_2785 hypothetical protein; cytochrome c assembly protein complement(1186171..1187037) Escherichia coli KO11FL 11776065 YP_005276828.1 CDS EKO11_1129 NC_016902.1 1187129 1188490 D TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; Signal peptide binding (SRP54) M- domain protein; KEGG: sbc:SbBS512_E2999 signal recognition particle protein; SMART: AAA ATPase; signal recognition particle protein 1187129..1188490 Escherichia coli KO11FL 11776066 YP_005276829.1 CDS EKO11_1130 NC_016902.1 1188739 1188987 D KEGG: sdy:SDY_2783 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; 30S ribosomal protein S16 1188739..1188987 Escherichia coli KO11FL 11776067 YP_005276830.1 CDS EKO11_1131 NC_016902.1 1189006 1189554 D KEGG: sdy:SDY_2782 16S rRNA-processing protein RimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; 16S rRNA processing protein RimM 1189006..1189554 Escherichia coli KO11FL 11776068 YP_005276831.1 CDS EKO11_1132 NC_016902.1 1189585 1190352 D TIGRFAM: tRNA (guanine-N1)-methyltransferase; KEGG: sdy:SDY_2781 tRNA (guanine-N(1)-)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; tRNA (guanine-N1)-methyltransferase 1189585..1190352 Escherichia coli KO11FL 11776069 YP_005276832.1 CDS EKO11_1133 NC_016902.1 1190394 1190741 D KEGG: sdy:SDY_2780 50S ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19; 50S ribosomal protein L19 1190394..1190741 Escherichia coli KO11FL 11776070 YP_005276833.1 CDS EKO11_1134 NC_016902.1 1190818 1191300 R PFAM: OmpA/MotB domain protein; KEGG: ebd:ECBD_1081 putative outer membrane lipoprotein; OmpA/MotB domain-containing protein complement(1190818..1191300) Escherichia coli KO11FL 11776071 YP_005276834.1 CDS EKO11_1135 NC_016902.1 1191316 1192542 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: eoh:ECO103_3178 hypothetical protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(1191316..1192542) Escherichia coli KO11FL 11776072 YP_005276835.1 CDS EKO11_1136 NC_016902.1 1192532 1193050 R KEGG: sbc:SbBS512_E2990 hypothetical protein; hypothetical protein complement(1192532..1193050) Escherichia coli KO11FL 11776073 YP_005276836.1 CDS EKO11_1137 NC_016902.1 1193200 1193562 R KEGG: ebd:ECBD_1084 hypothetical protein; hypothetical protein complement(1193200..1193562) Escherichia coli KO11FL 11776074 YP_005276837.1 CDS EKO11_1138 NC_016902.1 1193775 1194845 D TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: eoh:ECO103_3175 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; phospho-2-dehydro-3-deoxyheptonate aldolase 1193775..1194845 Escherichia coli KO11FL 11776075 YP_005276838.1 CDS EKO11_1139 NC_016902.1 1194856 1195977 D KEGG: sbc:SbBS512_E2987 bifunctional chorismate mutase/prephenate dehydrogenase; TIGRFAM: chorismate mutase; PFAM: Chorismate mutase, type II; Prephenate dehydrogenase; chorismate mutase 1194856..1195977 Escherichia coli KO11FL 11779394 YP_005276839.1 CDS EKO11_1140 NC_016902.1 1196020 1197180 R KEGG: sbc:SbBS512_E2986 bifunctional chorismate mutase/prephenate dehydratase; TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase, type II; chorismate mutase complement(1196020..1197180) Escherichia coli KO11FL 11779395 YP_005276840.1 CDS EKO11_1141 NC_016902.1 1197430 1197771 R KEGG: sdy:SDY_2768 translation inhibitor protein RaiA; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; sigma 54 modulation protein/ribosomal protein S30EA complement(1197430..1197771) Escherichia coli KO11FL 11776076 YP_005276841.1 CDS EKO11_1142 NC_016902.1 1198042 1198779 R TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: sbc:SbBS512_E2976 outer membrane protein assembly complex subunit YfiO; outer membrane assembly lipoprotein YfiO complement(1198042..1198779) Escherichia coli KO11FL 11776077 YP_005276842.1 CDS EKO11_1143 NC_016902.1 1198914 1199894 D TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: eoh:ECO103_3169 23S rRNA pseudouridine synthase D; SMART: RNA-binding S4 domain protein; RluA family pseudouridine synthase 1198914..1199894 Escherichia coli KO11FL 11776078 YP_005276843.1 CDS EKO11_1144 NC_016902.1 1199891 1200622 D PFAM: protein of unknown function DUF152; KEGG: eoh:ECO103_3168 hypothetical protein; hypothetical protein 1199891..1200622 Escherichia coli KO11FL 11776079 YP_005276844.1 CDS EKO11_1145 NC_016902.1 1200752 1203325 D TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; Clp ATPase-like; KEGG: sbo:SBO_2627 protein disaggregation chaperone; SMART: AAA ATPase; ATP-dependent chaperone ClpB 1200752..1203325 Escherichia coli KO11FL 11776080 YP_005276845.1 CDS EKO11_1146 NC_016902.1 1209189 1210487 D TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); KEGG: sdy:SDY_2830 alpha-ketoglutarate transporter; metabolite/H+ symporter, major facilitator superfamily (MFS) 1209189..1210487 Escherichia coli KO11FL 11776085 YP_005276846.1 CDS EKO11_1147 NC_016902.1 1210484 1210807 R KEGG: sbc:SbBS512_E2949 hypothetical protein; hypothetical protein complement(1210484..1210807) Escherichia coli KO11FL 11779396 YP_005276847.1 CDS EKO11_1148 NC_016902.1 1210853 1212208 R KEGG: efe:EFER_0488 phosphatidylserine synthase; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; phospholipase D/Transphosphatidylase complement(1210853..1212208) Escherichia coli KO11FL 11779397 YP_005276848.1 CDS EKO11_1149 NC_016902.1 1212322 1214982 R PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: eoh:ECO103_3163 fused putative acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit; N-acetyltransferase GCN5 complement(1212322..1214982) Escherichia coli KO11FL 11776086 YP_005276849.1 CDS EKO11_1150 NC_016902.1 1215014 1215712 R PFAM: DTW domain containing protein; KEGG: sdy:SDY_2826 hypothetical protein; DTW domain containing protein complement(1215014..1215712) Escherichia coli KO11FL 11776087 YP_005276850.1 CDS EKO11_1151 NC_016902.1 1215781 1216200 R KEGG: sdy:SDY_2825 thioredoxin 2; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain-containing protein; thioredoxin complement(1215781..1216200) Escherichia coli KO11FL 11776088 YP_005276851.1 CDS EKO11_1152 NC_016902.1 1216407 1217444 D PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: sdy:SDY_2824 putative methyltransferase; tRNA/rRNA methyltransferase SpoU 1216407..1217444 Escherichia coli KO11FL 11776089 YP_005276852.1 CDS EKO11_1153 NC_016902.1 1217492 1218181 R KEGG: sdy:SDY_2823 uracil-DNA glycosylase; TIGRFAM: uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase superfamily; uracil-DNA glycosylase complement(1217492..1218181) Escherichia coli KO11FL 11776090 YP_005276853.1 CDS EKO11_1154 NC_016902.1 1218486 1218869 D PFAM: formate C-acetyltransferase glycine radical; KEGG: sbc:SbBS512_E2957 autonomous glycyl radical cofactor GrcA; formate C-acetyltransferase glycine radical 1218486..1218869 Escherichia coli KO11FL 11776091 YP_005276854.1 CDS EKO11_1155 NC_016902.1 1218924 1219511 R PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: sbc:SbBS512_E2958 neutral amino-acid efflux protein; lysine exporter protein LysE/YggA complement(1218924..1219511) Escherichia coli KO11FL 11776092 YP_005276855.1 CDS EKO11_1156 NC_016902.1 1219614 1220495 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eoh:ECO103_3156 putative DNA-binding transcriptional regulator, LysR-type; LysR family transcriptional regulator 1219614..1220495 Escherichia coli KO11FL 11776093 YP_005276856.1 CDS EKO11_1157 NC_016902.1 1220528 1221862 R KEGG: ssn:SSON_2702 ATP-dependent RNA helicase SrmB; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; DEAD/DEAH box helicase complement(1220528..1221862) Escherichia coli KO11FL 11776094 YP_005276857.1 CDS EKO11_1158 NC_016902.1 1221994 1222731 D PFAM: methyltransferase small; KEGG: sfv:SFV_2638 putative enzyme; methyltransferase small 1221994..1222731 Escherichia coli KO11FL 11776095 YP_005276858.1 CDS EKO11_1159 NC_016902.1 1222716 1224338 R KEGG: eoh:ECO103_3152 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; L-aspartate oxidase complement(1222716..1224338) Escherichia coli KO11FL 11776096 YP_005276859.1 CDS EKO11_1160 NC_016902.1 1224746 1225321 D KEGG: sdy:SDY_2814 RNA polymerase sigma factor RpoE; TIGRFAM: RNA polymerase sigma factor RpoE; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; ECF subfamily RNA polymerase sigma-24 subunit 1224746..1225321 Escherichia coli KO11FL 11776097 YP_005276860.1 CDS EKO11_1161 NC_016902.1 1225354 1226004 D PFAM: Anti sigma-E protein RseA family protein; Anti sigma-E protein RseA domain protein; KEGG: sdy:SDY_2813 anti-RNA polymerase sigma factor SigE; anti sigma-E protein, RseA 1225354..1226004 Escherichia coli KO11FL 11779398 YP_005276861.1 CDS EKO11_1162 NC_016902.1 1226004 1226960 D PFAM: MucB/RseB family protein; KEGG: sdy:SDY_2812 periplasmic negative regulator of sigmaE; sigma E regulatory protein MucB/RseB 1226004..1226960 Escherichia coli KO11FL 11776098 YP_005276862.1 CDS EKO11_1163 NC_016902.1 1226957 1227436 D PFAM: Positive regulator of sigma(E) RseC/MucC; KEGG: sbc:SbBS512_E2935 SoxR reducing system protein RseC; sigma E positive regulator RseC/MucC 1226957..1227436 Escherichia coli KO11FL 11776099 YP_005276863.1 CDS EKO11_1164 NC_016902.1 1227634 1229433 D KEGG: sbc:SbBS512_E2934 GTP-binding protein LepA; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: GTP-binding protein LepA domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein; GTP-binding protein LepA 1227634..1229433 Escherichia coli KO11FL 11776100 YP_005276864.1 CDS EKO11_1165 NC_016902.1 1229449 1230423 D KEGG: sbc:SbBS512_E2933 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; Peptidase S26, conserved region; signal peptidase I 1229449..1230423 Escherichia coli KO11FL 11776101 YP_005276865.1 CDS EKO11_1166 NC_016902.1 1230695 1231375 D SMART: ribonuclease III; double-stranded RNA binding domain protein; TIGRFAM: ribonuclease III; KEGG: sdy:SDY_2808 ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein; ribonuclease III 1230695..1231375 Escherichia coli KO11FL 11776102 YP_005276866.1 CDS EKO11_1167 NC_016902.1 1231372 1232277 D KEGG: sbc:SbBS512_E2931 GTP-binding protein Era; TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; GTP-binding protein Era 1231372..1232277 Escherichia coli KO11FL 11776103 YP_005276867.1 CDS EKO11_1168 NC_016902.1 1232289 1233017 D KEGG: ssn:SSON_2689 DNA repair protein RecO; TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; DNA repair protein RecO 1232289..1233017 Escherichia coli KO11FL 11776104 YP_005276868.1 CDS EKO11_1169 NC_016902.1 1233029 1233760 D TIGRFAM: pyridoxal phosphate biosynthetic protein PdxJ; KEGG: efe:EFER_0510 pyridoxine 5'-phosphate synthase; PFAM: Pyridoxal phosphate biosynthetic protein PdxJ; pyridoxal phosphate biosynthetic protein PdxJ 1233029..1233760 Escherichia coli KO11FL 11776105 YP_005276869.1 CDS EKO11_1170 NC_016902.1 1233760 1234140 D KEGG: sbc:SbBS512_E2928 4'-phosphopantetheinyl transferase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; holo-(acyl-carrier-protein) synthase 1233760..1234140 Escherichia coli KO11FL 11776106 YP_005276870.1 CDS EKO11_1171 NC_016902.1 1234835 1235095 R KEGG: sbc:SbBS512_E2927 4Fe-4S binding domain protein; 4Fe-4S binding protein complement(1234835..1235095) Escherichia coli KO11FL 11776107 YP_005276871.1 CDS EKO11_1172 NC_016902.1 1235151 1235999 R PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: sbc:SbBS512_E2926 putative DNA-binding transcriptional regulator; RpiR family transcriptional regulator complement(1235151..1235999) Escherichia coli KO11FL 11776108 YP_005276872.1 CDS EKO11_1173 NC_016902.1 1236208 1236843 D TIGRFAM: HAD superfamily (subfamily IF) hydrolase, YfhB; KEGG: sbc:SbBS512_E2925 hypothetical protein; HAD superfamily hydrolase 1236208..1236843 Escherichia coli KO11FL 11779399 YP_005276873.1 CDS EKO11_1174 NC_016902.1 1236901 1237404 D PFAM: CMP/dCMP deaminase zinc-binding; KEGG: sbc:SbBS512_E2923 tRNA-specific adenosine deaminase; CMP/dCMP deaminase zinc-binding protein 1236901..1237404 Escherichia coli KO11FL 11776109 YP_005276874.1 CDS EKO11_1175 NC_016902.1 1237401 1238957 R KEGG: eok:G2583_3089 putative soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein; PFAM: Lytic transglycosylase catalytic; extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; lytic transglycosylase complement(1237401..1238957) Escherichia coli KO11FL 11779400 YP_005276875.1 CDS EKO11_1176 NC_016902.1 1239215 1243102 D TIGRFAM: phosphoribosylformylglycinamidine synthase; KEGG: sbc:SbBS512_E2922 phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; phosphoribosylformylglycinamidine synthase 1239215..1243102 Escherichia coli KO11FL 11779401 YP_005276876.1 CDS EKO11_1177 NC_016902.1 1243615 1245105 D manually curated; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: sdy:SDY_2746 putative 2-component sensor protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase 1243615..1245105 Escherichia coli KO11FL 11776110 YP_005276877.1 CDS EKO11_1178 NC_016902.1 1245270 1245983 D KEGG: eoi:ECO111_3281 hypothetical protein; hypothetical protein 1245270..1245983 Escherichia coli KO11FL 11776111 YP_005276878.1 CDS EKO11_1179 NC_016902.1 1245973 1247307 D KEGG: eoh:ECO103_3075 putative DNA-binding response regulator in two-component system; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; SMART: response regulator receiver; AAA ATPase; putative two component sigma-54 specific transcriptional regulator 1245973..1247307 Escherichia coli KO11FL 11776112 YP_005276879.1 CDS EKO11_1180 NC_016902.1 1247368 1247706 D PFAM: nitrogen regulatory protein P-II; KEGG: sdy:SDY_2743 nitrogen regulatory protein P-II 1; nitrogen regulatory protein P-II 1247368..1247706 Escherichia coli KO11FL 11776113 YP_005276880.1 CDS EKO11_1181 NC_016902.1 1247751 1248941 R PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; globin; Oxidoreductase FAD-binding domain protein; KEGG: eoh:ECO103_3073 nitric oxide dioxygenase; oxidoreductase FAD/NAD(P)-binding domain-containing protein complement(1247751..1248941) Escherichia coli KO11FL 11776114 YP_005276881.1 CDS EKO11_1182 NC_016902.1 1249269 1250522 D KEGG: sbc:SbBS512_E2916 serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase; glycine hydroxymethyltransferase 1249269..1250522 Escherichia coli KO11FL 11776115 YP_005276882.1 CDS EKO11_1183 NC_016902.1 1250586 1251779 R PFAM: ROK family protein; KEGG: sbo:SBO_2578 putative NAGC-like transcriptional regulator; ROK family protein complement(1250586..1251779) Escherichia coli KO11FL 11776116 YP_005276883.1 CDS EKO11_1184 NC_016902.1 1251897 1255178 D PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: ebd:ECBD_1135 tetratricopeptide TPR_2 repeat protein; hypothetical protein 1251897..1255178 Escherichia coli KO11FL 11776117 YP_005276884.1 CDS EKO11_1185 NC_016902.1 1255275 1256258 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sfv:SFV_2596 putative LacI-type transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator 1255275..1256258 Escherichia coli KO11FL 11776118 YP_005276885.1 CDS EKO11_1186 NC_016902.1 1256281 1257792 D KEGG: eoj:ECO26_3594 fused putative sugar transporter subunits of ABC superfamily: ATP-binding components; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1256281..1257792 Escherichia coli KO11FL 11776119 YP_005276886.1 CDS EKO11_1187 NC_016902.1 1257817 1258815 D PFAM: inner-membrane translocator; KEGG: eoi:ECO111_3270 putative sugar transporter subunit; inner-membrane translocator 1257817..1258815 Escherichia coli KO11FL 11776120 YP_005276887.1 CDS EKO11_1188 NC_016902.1 1258881 1259942 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ssn:SSON_2628 putative oxidoreductase; alcohol dehydrogenase 1258881..1259942 Escherichia coli KO11FL 11779402 YP_005276888.1 CDS EKO11_1189 NC_016902.1 1259954 1260826 D PFAM: Aldose 1-epimerase; KEGG: eoh:ECO103_3065 hypothetical protein; aldose 1-epimerase 1259954..1260826 Escherichia coli KO11FL 11776121 YP_005276889.1 CDS EKO11_1190 NC_016902.1 1260874 1261296 R PFAM: DoxX family protein; KEGG: sfx:S2762 hypothetical protein; DoxX family protein complement(1260874..1261296) Escherichia coli KO11FL 11776122 YP_005276890.1 CDS EKO11_1191 NC_016902.1 1261393 1262595 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: eoh:ECO103_3062 phenylpropionate dioxygenase ferredoxin reductase subunit; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(1261393..1262595) Escherichia coli KO11FL 11776123 YP_005276891.1 CDS EKO11_1192 NC_016902.1 1262605 1263417 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sbo:SBO_2565 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; short-chain dehydrogenase/reductase SDR complement(1262605..1263417) Escherichia coli KO11FL 11776124 YP_005276892.1 CDS EKO11_1193 NC_016902.1 1263414 1263734 R PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: ssn:SSON_2622 3-phenylpropionate dioxygenase ferredoxin subunit; Rieske (2Fe-2S) iron-sulfur domain-containing protein complement(1263414..1263734) Escherichia coli KO11FL 11776125 YP_005276893.1 CDS EKO11_1194 NC_016902.1 1263734 1264252 R PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; KEGG: eoi:ECO111_3263 3-phenylpropionate dioxygenase subunit beta; aromatic-ring-hydroxylating dioxygenase subunit beta complement(1263734..1264252) Escherichia coli KO11FL 11776126 YP_005276894.1 CDS EKO11_1195 NC_016902.1 1264249 1265610 R PFAM: Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like; Rieske [2Fe-2S] iron-sulphur domain; KEGG: ssn:SSON_2620 large terminal subunit of phenylpropionate dioxygenase; Aromatic-ring-hydroxylating dioxygenase subunit alpha-like protein complement(1264249..1265610) Escherichia coli KO11FL 11776127 YP_005276895.1 CDS EKO11_1196 NC_016902.1 1265746 1266636 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebd:ECBD_1147 DNA-binding transcriptional regulator HcaR; LysR family transcriptional regulator 1265746..1266636 Escherichia coli KO11FL 11776128 YP_005276896.1 CDS EKO11_1197 NC_016902.1 1266796 1267935 D KEGG: eoh:ECO103_3053 putative 3-phenylpropionic acid transporter; TIGRFAM: phenyl proprionate permease family protein; PFAM: major facilitator superfamily MFS_1; phenyl proprionate permease family protein 1266796..1267935 Escherichia coli KO11FL 11776129 YP_005276897.1 CDS EKO11_1198 NC_016902.1 1267927 1269207 R PFAM: PRD domain protein; KEGG: eoh:ECO103_3052 stationary phase inducible protein CsiE; transcriptional antiterminator BglG complement(1267927..1269207) Escherichia coli KO11FL 11776130 YP_005276898.1 CDS EKO11_1199 NC_016902.1 1269398 1270252 R PFAM: alpha/beta hydrolase fold; KEGG: ebd:ECBD_1150 putative enzyme; alpha/beta hydrolase fold protein complement(1269398..1270252) Escherichia coli KO11FL 11776131 YP_005276899.1 CDS EKO11_1200 NC_016902.1 1270397 1271200 R PFAM: inositol monophosphatase; KEGG: sbo:SBO_2557 inositol monophosphatase; inositol monophosphatase complement(1270397..1271200) Escherichia coli KO11FL 11776132 YP_005276900.1 CDS EKO11_1201 NC_016902.1 1271319 1272059 D KEGG: sbc:SbBS512_E2907 RNA methyltransferase, TrmH family, group 1; TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA methyltransferase, TrmH family, group 1 1271319..1272059 Escherichia coli KO11FL 11779403 YP_005276901.1 CDS EKO11_1202 NC_016902.1 1272329 1272817 D KEGG: sdy:SDY_2727 DNA-binding transcriptional regulator IscR; TIGRFAM: iron-sulfur cluster assembly transcription factor IscR; transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; AsnC family transcriptional regulator 1272329..1272817 Escherichia coli KO11FL 11776133 YP_005276902.1 CDS EKO11_1203 NC_016902.1 1272929 1274143 D KEGG: sdy:SDY_2726 cysteine desulfurase; TIGRFAM: cysteine desulfurase IscS; PFAM: aminotransferase class V; cysteine desulfurase IscS 1272929..1274143 Escherichia coli KO11FL 11776134 YP_005276903.1 CDS EKO11_1204 NC_016902.1 1274171 1274557 D KEGG: sdy:SDY_2725 scaffold protein; TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein; FeS cluster assembly scaffold IscU 1274171..1274557 Escherichia coli KO11FL 11776135 YP_005276904.1 CDS EKO11_1205 NC_016902.1 1274574 1274897 D KEGG: sdy:SDY_2724 iron-sulfur cluster assembly protein; TIGRFAM: iron-sulfur cluster assembly protein IscA; iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; iron-sulfur cluster assembly protein IscA 1274574..1274897 Escherichia coli KO11FL 11776136 YP_005276905.1 CDS EKO11_1206 NC_016902.1 1274993 1275508 D TIGRFAM: co-chaperone Hsc20; PFAM: HSC20 oligomerisation; heat shock protein DnaJ domain protein; KEGG: eoh:ECO103_3044 co-chaperone HscB; SMART: heat shock protein DnaJ domain protein; co-chaperone Hsc20 1274993..1275508 Escherichia coli KO11FL 11776137 YP_005276906.1 CDS EKO11_1207 NC_016902.1 1275525 1277375 D KEGG: sdy:SDY_2722 chaperone protein HscA; TIGRFAM: Fe-S protein assembly chaperone HscA; PFAM: Heat shock protein 70; Fe-S protein assembly chaperone HscA 1275525..1277375 Escherichia coli KO11FL 11776138 YP_005276907.1 CDS EKO11_1208 NC_016902.1 1277377 1277712 D KEGG: sbc:SbBS512_E2900 ferredoxin, 2Fe-2S type, ISC system; TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin; ferredoxin, 2Fe-2S type, ISC system 1277377..1277712 Escherichia coli KO11FL 11776139 YP_005276908.1 CDS EKO11_1209 NC_016902.1 1277724 1277924 D KEGG: sdy:SDY_2720 hypothetical protein; TIGRFAM: FeS assembly protein IscX; PFAM: protein of unknown function DUF528; FeS assembly protein IscX 1277724..1277924 Escherichia coli KO11FL 11776140 YP_005276909.1 CDS EKO11_1210 NC_016902.1 1278102 1279385 D PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: ebw:BWG_2287 aminopeptidase B; peptidase M17 leucyl aminopeptidase domain-containing protein 1278102..1279385 Escherichia coli KO11FL 11776141 YP_005276910.1 CDS EKO11_1211 NC_016902.1 1279527 1280303 D KEGG: eoh:ECO103_3039 enhanced serine sensitivity protein SseB; enhanced serine sensitivity protein SseB 1279527..1280303 Escherichia coli KO11FL 11776142 YP_005276911.1 CDS EKO11_1212 NC_016902.1 1280796 1281641 R KEGG: ssn:SSON_2603 3-mercaptopyruvate sulfurtransferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; Rhodanese domain-containing protein complement(1280796..1281641) Escherichia coli KO11FL 11776143 YP_005276912.1 CDS EKO11_1213 NC_016902.1 1281848 1286809 D PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: eoi:ECO111_3244 hypothetical protein; alpha-2-macroglobulin domain-containing protein 1281848..1286809 Escherichia coli KO11FL 11776144 YP_005276913.1 CDS EKO11_1214 NC_016902.1 1286810 1289122 D TIGRFAM: penicillin-binding protein 1C; KEGG: eoh:ECO103_3036 penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein; penicillin-binding protein 1C 1286810..1289122 Escherichia coli KO11FL 11776145 YP_005276914.1 CDS EKO11_1215 NC_016902.1 1289271 1289702 D PFAM: nucleoside diphosphate kinase; KEGG: sdy:SDY_2714 nucleoside diphosphate kinase; SMART: nucleoside diphosphate kinase; nucleoside-diphosphate kinase 1289271..1289702 Escherichia coli KO11FL 11776146 YP_005276915.1 CDS EKO11_1216 NC_016902.1 1289852 1291006 D KEGG: sdy:SDY_2713 hypothetical protein; TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; radical SAM enzyme, Cfr family 1289852..1291006 Escherichia coli KO11FL 11776147 YP_005276916.1 CDS EKO11_1217 NC_016902.1 1291291 1292304 D KEGG: eoh:ECO103_3033 cytoskeletal protein RodZ; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; transcriptional regulator, XRE family 1291291..1292304 Escherichia coli KO11FL 11779404 YP_005276917.1 CDS EKO11_1218 NC_016902.1 1292331 1293449 D KEGG: efe:EFER_0657 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: IspG family protein; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 1292331..1293449 Escherichia coli KO11FL 11776148 YP_005276918.1 CDS EKO11_1219 NC_016902.1 1293560 1294834 D TIGRFAM: histidyl-tRNA synthetase; KEGG: ebd:ECBD_1172 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; histidyl-tRNA synthetase 1293560..1294834 Escherichia coli KO11FL 11776149 YP_005276919.1 CDS EKO11_1220 NC_016902.1 1294852 1295472 D PFAM: Protein of unknown function DUF2133; KEGG: sdy:SDY_2709 hypothetical protein; hypothetical protein 1294852..1295472 Escherichia coli KO11FL 11779405 YP_005276920.1 CDS EKO11_1221 NC_016902.1 1295483 1296661 D TIGRFAM: outer membrane assembly lipoprotein YfgL; PFAM: Pyrrolo-quinoline quinone repeat-containing protein; KEGG: sbo:SBO_2536 outer membrane protein assembly complex subunit YfgL; SMART: Pyrrolo-quinoline quinone beta-propeller repeat; outer membrane assembly lipoprotein YfgL 1295483..1296661 Escherichia coli KO11FL 11776150 YP_005276921.1 CDS EKO11_1222 NC_016902.1 1296779 1298251 D KEGG: ebd:ECBD_1175 GTP-binding protein EngA; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; ribosome-associated GTPase EngA 1296779..1298251 Escherichia coli KO11FL 11776151 YP_005276922.1 CDS EKO11_1223 NC_016902.1 1298320 1298535 D PFAM: protein of unknown function DUF1407; KEGG: sdy:SDY_2706 hypothetical protein; hypothetical protein 1298320..1298535 Escherichia coli KO11FL 11776152 YP_005276923.1 CDS EKO11_1224 NC_016902.1 1298532 1299902 R KEGG: sbc:SbBS512_E2885 exodeoxyribonuclease VII large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit-like; nucleic acid binding OB-fold tRNA/helicase-type; exodeoxyribonuclease VII large subunit complement(1298532..1299902) Escherichia coli KO11FL 11779406 YP_005276924.1 CDS EKO11_1225 NC_016902.1 1300064 1301530 D SMART: CBS domain containing protein; TIGRFAM: inosine-5'-monophosphate dehydrogenase; KEGG: sbc:SbBS512_E2883 inosine 5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein; inosine-5'-monophosphate dehydrogenase 1300064..1301530 Escherichia coli KO11FL 11776153 YP_005276925.1 CDS EKO11_1226 NC_016902.1 1301599 1303176 D KEGG: eok:G2583_3031 GMP synthase (glutamine-hydrolyzing); TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I; GMP synthase large subunit 1301599..1303176 Escherichia coli KO11FL 11776154 YP_005276926.1 CDS EKO11_1227 NC_016902.1 1303271 1303810 R KEGG: ebd:ECBD_1180 hypothetical protein; hypothetical protein complement(1303271..1303810) Escherichia coli KO11FL 11779407 YP_005276927.1 CDS EKO11_1228 NC_016902.1 1303826 1304341 R KEGG: ssn:SSON_2587 putative outer membrane lipoprotein; putative outer membrane lipoprotein complement(1303826..1304341) Escherichia coli KO11FL 11776155 YP_005276928.1 CDS EKO11_1229 NC_016902.1 1304655 1304846 R manually curated; KEGG: sdy:SDY_2696 hypothetical protein; hypothetical protein complement(1304655..1304846) Escherichia coli KO11FL 11776156 YP_005276929.1 CDS EKO11_1230 NC_016902.1 1304864 1305016 D KEGG: ebd:ECBD_1184 hypothetical protein; hypothetical protein 1304864..1305016 Escherichia coli KO11FL 11776157 YP_005276930.1 CDS EKO11_1231 NC_016902.1 1305198 1307441 D KEGG: eoh:ECO103_3020 putative inner membrane protein; PFAM: MASE1 domain protein; EAL domain protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase 1305198..1307441 Escherichia coli KO11FL 11776158 YP_005276931.1 CDS EKO11_1232 NC_016902.1 1307480 1309021 R KEGG: ssn:SSON_2584 exopolyphosphatase; PFAM: Ppx/GppA phosphatase; Ppx/GppA phosphatase complement(1307480..1309021) Escherichia coli KO11FL 11776159 YP_005276932.1 CDS EKO11_1233 NC_016902.1 1309026 1311092 R TIGRFAM: Polyphosphate kinase; KEGG: ebd:ECBD_1187 polyphosphate kinase; PFAM: Polyphosphate kinase; polyphosphate kinase complement(1309026..1311092) Escherichia coli KO11FL 11776160 YP_005276933.1 CDS EKO11_1234 NC_016902.1 1311263 1311901 R KEGG: sfv:SFV_2545 phosphoribosylglycinamide formyltransferase; TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; phosphoribosylglycinamide formyltransferase complement(1311263..1311901) Escherichia coli KO11FL 11776161 YP_005276934.1 CDS EKO11_1235 NC_016902.1 1311901 1312938 R TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; KEGG: sfx:S2692 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein; phosphoribosylformylglycinamidine cyclo-ligase complement(1311901..1312938) Escherichia coli KO11FL 11776162 YP_005276935.1 CDS EKO11_1236 NC_016902.1 1313263 1313889 D KEGG: sdy:SDY_2687 uracil phosphoribosyltransferase; TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase; uracil phosphoribosyltransferase 1313263..1313889 Escherichia coli KO11FL 11776163 YP_005276936.1 CDS EKO11_1237 NC_016902.1 1313975 1315264 D KEGG: ssn:SSON_2579 uracil transporter; TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; uracil-xanthine permease 1313975..1315264 Escherichia coli KO11FL 11776164 YP_005276937.1 CDS EKO11_1238 NC_016902.1 1315314 1316060 D KEGG: sbc:SbBS512_E2870 DNA replication initiation factor; TIGRFAM: DnaA regulatory inactivator Hda; PFAM: Chromosomal replication initiator DnaA; DnaA regulatory inactivator Hda 1315314..1316060 Escherichia coli KO11FL 11776165 YP_005276938.1 CDS EKO11_1239 NC_016902.1 1316198 1316557 R KEGG: sdy:SDY_2684 putative oxidoreductase; TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related; arsenate reductase complement(1316198..1316557) Escherichia coli KO11FL 11776166 YP_005276939.1 CDS EKO11_1240 NC_016902.1 1316578 1318041 R PFAM: peptidase M48 Ste24p; KEGG: sfv:SFV_2539 hypothetical protein; peptidase M48 Ste24p complement(1316578..1318041) Escherichia coli KO11FL 11776167 YP_005276940.1 CDS EKO11_1241 NC_016902.1 1318254 1319315 D PFAM: protein of unknown function UPF0118; KEGG: sdy:SDY_2682 putative permease; hypothetical protein 1318254..1319315 Escherichia coli KO11FL 11776168 YP_005276941.1 CDS EKO11_1242 NC_016902.1 1319353 1320201 R KEGG: eoi:ECO111_3216 putative formate transporter; TIGRFAM: formate/nitrite transporter; PFAM: formate/nitrite transporter; formate/nitrite transporter complement(1319353..1320201) Escherichia coli KO11FL 11776169 YP_005276942.1 CDS EKO11_1243 NC_016902.1 1320223 1322235 R KEGG: eoi:ECO111_3215 DNA-binding transcriptional activator HyfR, formate sensing; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: GAF domain protein; AAA ATPase; Fis family NifA subfamily transcriptional regulator complement(1320223..1322235) Escherichia coli KO11FL 11776170 YP_005276943.1 CDS EKO11_1244 NC_016902.1 1322265 1322678 R PFAM: formate hydrogenlyase maturation HycH; KEGG: eoi:ECO111_3214 putative processing element hydrogenase 4; formate hydrogenlyase maturation HycH complement(1322265..1322678) Escherichia coli KO11FL 11779408 YP_005276944.1 CDS EKO11_1246 NC_016902.1 1323425 1323964 R KEGG: sbo:SBO_2509 hydrogenase 4 subunit H; hydrogenase 4 subunit H complement(1323425..1323964) Escherichia coli KO11FL 11776172 YP_005276945.1 CDS EKO11_1247 NC_016902.1 1323974 1325689 R PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; nickel-dependent hydrogenase large subunit; NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: sbo:SBO_2508 hydrogenase 4 subunit; NADH dehydrogenase (ubiquinone) 30 kDa subunit complement(1323974..1325689) Escherichia coli KO11FL 11776173 YP_005276946.1 CDS EKO11_1248 NC_016902.1 1325679 1327259 R PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: eoi:ECO111_3209 hydrogenase 4 subunit F; NADH/ubiquinone/plastoquinone complement(1325679..1327259) Escherichia coli KO11FL 11776174 YP_005276947.1 CDS EKO11_1249 NC_016902.1 1327264 1327914 R PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: ssn:SSON_2566 hydrogenase 4 membrane subunit; NADH-ubiquinone oxidoreductase chain 4L complement(1327264..1327914) Escherichia coli KO11FL 11776175 YP_005276948.1 CDS EKO11_1250 NC_016902.1 1327926 1329365 R PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: eoi:ECO111_3207 hydrogenase 4 subunit D; NADH/ubiquinone/plastoquinone complement(1327926..1329365) Escherichia coli KO11FL 11776176 YP_005276949.1 CDS EKO11_1251 NC_016902.1 1329382 1330329 R PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: eoi:ECO111_3206 hydrogenase 4, membrane subunit HyfC; respiratory-chain NADH dehydrogenase subunit 1 complement(1329382..1330329) Escherichia coli KO11FL 11776177 YP_005276950.1 CDS EKO11_1252 NC_016902.1 1330340 1332358 R PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: eoi:ECO111_3205 hydrogenase 4 subunit B; NADH/ubiquinone/plastoquinone complement(1330340..1332358) Escherichia coli KO11FL 11776178 YP_005276951.1 CDS EKO11_1253 NC_016902.1 1332358 1332975 R KEGG: ssn:SSON_2562 hydrogenase 4 Fe-S subunit; hydrogenase 4 Fe-S subunit complement(1332358..1332975) Escherichia coli KO11FL 11776179 YP_005276952.1 CDS EKO11_1254 NC_016902.1 1333228 1333698 R KEGG: sdy:SDY_2669 thioredoxin-dependent thiol peroxidase; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; peroxiredoxin complement(1333228..1333698) Escherichia coli KO11FL 11776180 YP_005276953.1 CDS EKO11_1255 NC_016902.1 1333698 1334270 R PFAM: amino acid-binding ACT domain protein; KEGG: sbc:SbBS512_E2851 glycine cleavage system transcriptional repressor; amino acid-binding ACT protein complement(1333698..1334270) Escherichia coli KO11FL 11776181 YP_005276954.1 CDS EKO11_1256 NC_016902.1 1334416 1335294 D TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase; dihydrodipicolinate synthase 1334416..1335294 Escherichia coli KO11FL 11776182 YP_005276955.1 CDS EKO11_1257 NC_016902.1 1335311 1336345 D KEGG: ssn:SSON_2558 lipoprotein; lipoprotein 1335311..1336345 Escherichia coli KO11FL 11776183 YP_005276956.1 CDS EKO11_1258 NC_016902.1 1336256 1336507 R manually curated; KEGG: sdy:SDY_2665 hypothetical protein; hypothetical protein complement(1336256..1336507) Escherichia coli KO11FL 11776184 YP_005276957.1 CDS EKO11_1259 NC_016902.1 1336558 1337271 D TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: sbc:SbBS512_E2848 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; phosphoribosylaminoimidazolesuccinocarboxamide synthase 1336558..1337271 Escherichia coli KO11FL 11776185 YP_005276958.1 CDS EKO11_1260 NC_016902.1 1337387 1337653 D KEGG: eoh:ECO103_2987 putative post-segregational killing toxin; putative post-segregational killing toxin 1337387..1337653 Escherichia coli KO11FL 11776186 YP_005276959.1 CDS EKO11_1261 NC_016902.1 1337653 1338051 D PFAM: PilT protein domain protein; KEGG: eoh:ECO103_2986 plasmid maintenance protein; PilT protein domain-containing protein 1337653..1338051 Escherichia coli KO11FL 11776187 YP_005276960.1 CDS EKO11_1262 NC_016902.1 1338198 1339061 D PFAM: protein of unknown function zinc metallopeptidase; KEGG: sfv:SFV_2520 hypothetical protein; hypothetical protein 1338198..1339061 Escherichia coli KO11FL 11776188 YP_005276961.1 CDS EKO11_1263 NC_016902.1 1339076 1341091 D KEGG: eoh:ECO103_2984 putative hydrolase; putative hydrolase 1339076..1341091 Escherichia coli KO11FL 11779409 YP_005276962.1 CDS EKO11_1264 NC_016902.1 1341165 1341863 D PFAM: phospholipase/Carboxylesterase; KEGG: ebd:ECBD_1216 esterase YpfH; phospholipase/Carboxylesterase 1341165..1341863 Escherichia coli KO11FL 11776189 YP_005276963.1 CDS EKO11_1265 NC_016902.1 1341944 1342144 R KEGG: sdy:SDY_2657 hypothetical protein; hypothetical protein complement(1341944..1342144) Escherichia coli KO11FL 11776190 YP_005276964.1 CDS EKO11_1266 NC_016902.1 1342172 1343299 R KEGG: sbo:SBO_2488 succinyl-diaminopimelate desuccinylase; TIGRFAM: succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; succinyl-diaminopimelate desuccinylase complement(1342172..1343299) Escherichia coli KO11FL 11779410 YP_005276965.1 CDS EKO11_1267 NC_016902.1 1343303 1343659 R PFAM: arsenate reductase and related; KEGG: sdy:SDY_2655 hypothetical protein; arsenate reductase-like protein complement(1343303..1343659) Escherichia coli KO11FL 11776191 YP_005276966.1 CDS EKO11_1268 NC_016902.1 1344198 1347311 R KEGG: eoh:ECO103_2979 aminoglycoside/multidrug efflux system; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(1344198..1347311) Escherichia coli KO11FL 11776192 YP_005276967.1 CDS EKO11_1269 NC_016902.1 1347475 1349175 R KEGG: eoh:ECO103_2978 nitrate/nitrite sensor protein NarQ; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; integral membrane sensor signal transduction histidine kinase complement(1347475..1349175) Escherichia coli KO11FL 11776193 YP_005276968.1 CDS EKO11_1270 NC_016902.1 1349381 1351360 D KEGG: eoi:ECO111_3188 putative oxidoreductase Fe-S binding subunit; TIGRFAM: glutamate synthase, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutamate synthase, small subunit 1349381..1351360 Escherichia coli KO11FL 11776194 YP_005276969.1 CDS EKO11_1271 NC_016902.1 1351428 1352003 D PFAM: NUDIX hydrolase; KEGG: sbc:SbBS512_E2835 hydrolase, NUDIX family; NUDIX hydrolase 1351428..1352003 Escherichia coli KO11FL 11776195 YP_005276970.1 CDS EKO11_1272 NC_016902.1 1352129 1353172 D PFAM: protein of unknown function DUF1176; KEGG: eoh:ECO103_2975 hypothetical protein; hypothetical protein 1352129..1353172 Escherichia coli KO11FL 11776196 YP_005276971.1 CDS EKO11_1273 NC_016902.1 1353268 1355271 R KEGG: ebd:ECBD_1225 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain-containing protein; Transketolase central region; transketolase complement(1353268..1355271) Escherichia coli KO11FL 11776197 YP_005276972.1 CDS EKO11_1274 NC_016902.1 1355291 1356241 R KEGG: ebd:ECBD_1226 transaldolase A; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase complement(1355291..1356241) Escherichia coli KO11FL 11776198 YP_005276973.1 CDS EKO11_1275 NC_016902.1 1356530 1358809 D PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase; KEGG: sbo:SBO_2478 malic enzyme; malic protein NAD-binding protein 1356530..1358809 Escherichia coli KO11FL 11776199 YP_005276974.1 CDS EKO11_1276 NC_016902.1 1359102 1359437 D PFAM: microcompartments protein; KEGG: sfv:SFV_2506 hypothetical protein; microcompartments protein 1359102..1359437 Escherichia coli KO11FL 11776200 YP_005276975.1 CDS EKO11_1277 NC_016902.1 1359450 1359929 D TIGRFAM: ethanolamine utilization protein, EutP; KEGG: sbc:SbBS512_E2827 ethanolamine utilization protein, EutP; ethanolamine utilization protein, EutP 1359450..1359929 Escherichia coli KO11FL 11776201 YP_005276976.1 CDS EKO11_1278 NC_016902.1 1359904 1360605 D PFAM: Ethanolamine utilisation EutQ family protein; KEGG: eoh:ECO103_2969 hypothetical protein; ethanolamine utilization EutQ family protein 1359904..1360605 Escherichia coli KO11FL 11776202 YP_005276977.1 CDS EKO11_1279 NC_016902.1 1360602 1361405 D KEGG: eoh:ECO103_2968 putative cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; cob(I)yrinic acid a,c-diamide adenosyltransferase 1360602..1361405 Escherichia coli KO11FL 11776203 YP_005276978.1 CDS EKO11_1280 NC_016902.1 1361402 1362418 D KEGG: ebd:ECBD_1232 phosphotransacetylase; TIGRFAM: phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase; phosphate acetyltransferase 1361402..1362418 Escherichia coli KO11FL 11779411 YP_005276979.1 CDS EKO11_1281 NC_016902.1 1362415 1362750 D PFAM: microcompartments protein; KEGG: sbc:SbBS512_E2823 ethanolamine utilization protein EutM; microcompartments protein 1362415..1362750 Escherichia coli KO11FL 11776204 YP_005276980.1 CDS EKO11_1282 NC_016902.1 1362857 1363144 D PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: sbc:SbBS512_E2822 ethanolamine utilization protein; ethanolamine utilization protein EutN/carboxysome structural protein Ccml 1362857..1363144 Escherichia coli KO11FL 11776205 YP_005276981.1 CDS EKO11_1283 NC_016902.1 1363156 1364559 D PFAM: Aldehyde Dehydrogenase; KEGG: eoh:ECO103_2964 putative aldehyde dehydrogenase EutE; Aldehyde Dehydrogenase 1363156..1364559 Escherichia coli KO11FL 11779412 YP_005276982.1 CDS EKO11_1284 NC_016902.1 1364570 1365406 D TIGRFAM: ethanolamine utilization protein EutJ family protein; KEGG: ebw:BWG_2216 putative chaperonin, ethanolamine utilization protein; ethanolamine utilization protein EutJ family protein 1364570..1365406 Escherichia coli KO11FL 11776206 YP_005276983.1 CDS EKO11_1285 NC_016902.1 1365396 1366583 D PFAM: iron-containing alcohol dehydrogenase; KEGG: efe:EFER_0726 putative alcohol dehydrogenase in ethanolamine utilization; ethanolaminosome; iron-containing alcohol dehydrogenase 1365396..1366583 Escherichia coli KO11FL 11776207 YP_005276984.1 CDS EKO11_1286 NC_016902.1 1366700 1367926 D PFAM: Ethanolamine utilisation protein EutH; KEGG: eoh:ECO103_2961 putative inner membrane protein; Ethanolamine utilization protein EutH 1366700..1367926 Escherichia coli KO11FL 11779413 YP_005276985.1 CDS EKO11_1287 NC_016902.1 1367923 1369326 D PFAM: Ethanolamine utilisation EutA; KEGG: eoh:ECO103_2960 reactivating factor for ethanolamine ammonia lyase; ethanolamine utilization EutA 1367923..1369326 Escherichia coli KO11FL 11779414 YP_005276986.1 CDS EKO11_1288 NC_016902.1 1369338 1370699 D KEGG: sbc:SbBS512_E2816 ethanolamine ammonia-lyase, large subunit; PFAM: Ethanolamine ammonia lyase large subunit; ethanolamine ammonia-lyase 1369338..1370699 Escherichia coli KO11FL 11776208 YP_005276987.1 CDS EKO11_1289 NC_016902.1 1370720 1371607 D KEGG: sdy:SDY_2638 ethanolamine ammonia-lyase small subunit; PFAM: Ethanolamine ammonia-lyase light chain; ethanolamine ammonia-lyase 1370720..1371607 Escherichia coli KO11FL 11776209 YP_005276988.1 CDS EKO11_1290 NC_016902.1 1371617 1372276 D PFAM: microcompartments protein; KEGG: sbc:SbBS512_E2811 putative ethanolamine utilization protein EutL; microcompartments protein 1371617..1372276 Escherichia coli KO11FL 11776210 YP_005276989.1 CDS EKO11_1291 NC_016902.1 1372289 1372789 D PFAM: microcompartments protein; KEGG: sbc:SbBS512_E2810 putative ethanolamine utilization protein EutK; microcompartments protein 1372289..1372789 Escherichia coli KO11FL 11776211 YP_005276990.1 CDS EKO11_1292 NC_016902.1 1372835 1373887 D KEGG: eoh:ECO103_2955 transcriptional regulator EutR; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 1372835..1373887 Escherichia coli KO11FL 11776212 YP_005276991.1 CDS EKO11_1293 NC_016902.1 1373893 1374792 R KEGG: sbo:SBO_2461 coproporphyrinogen III oxidase; PFAM: coproporphyrinogen III oxidase; coproporphyrinogen oxidase complement(1373893..1374792) Escherichia coli KO11FL 11776213 YP_005276992.1 CDS EKO11_1294 NC_016902.1 1374796 1375665 R KEGG: sbc:SbBS512_E2807 N-acetylmuramoyl-L-alanine amidase I; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; cell wall hydrolase/autolysin complement(1374796..1375665) Escherichia coli KO11FL 11776214 YP_005276993.1 CDS EKO11_1295 NC_016902.1 1375768 1376304 D KEGG: eok:G2583_2965 acetyltransferase YpeA; manually curated; PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1375768..1376304 Escherichia coli KO11FL 11776215 YP_005276994.1 CDS EKO11_1296 NC_016902.1 1376291 1376740 D KEGG: eok:G2583_2964 hypothetical protein; hypothetical protein 1376291..1376740 Escherichia coli KO11FL 11776216 YP_005276995.1 CDS EKO11_1297 NC_016902.1 1376801 1377376 D PFAM: protein of unknown function DUF1131; KEGG: sdy:SDY_2630 hypothetical protein; hypothetical protein 1376801..1377376 Escherichia coli KO11FL 11776217 YP_005276996.1 CDS EKO11_1298 NC_016902.1 1377472 1378371 D KEGG: sbc:SbBS512_E2803 dyp-type peroxidase family protein; TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; dyp-type peroxidase family protein 1377472..1378371 Escherichia coli KO11FL 11776218 YP_005276997.1 CDS EKO11_1299 NC_016902.1 1378429 1379733 R PFAM: beta-lactamase; KEGG: eoj:ECO26_3482 hypothetical protein; beta-lactamase complement(1378429..1379733) Escherichia coli KO11FL 11776219 YP_005276998.1 CDS EKO11_1300 NC_016902.1 1379738 1381162 R KEGG: eoh:ECO103_2947 PTS system N-acetylmuramic acid transporter subunits EIIBC; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; Protein-N(pi)-phosphohistidine--sugar phosphotransferase complement(1379738..1381162) Escherichia coli KO11FL 11779415 YP_005276999.1 CDS EKO11_1301 NC_016902.1 1381166 1382062 R KEGG: eoj:ECO26_3480 N-acetylmuramic acid-6-phosphate etherase; TIGRFAM: glucokinase regulatory-like protein; PFAM: sugar isomerase (SIS); RpiR family transcriptional regulator complement(1381166..1382062) Escherichia coli KO11FL 11779416 YP_005277000.1 CDS EKO11_1302 NC_016902.1 1382226 1383083 D PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: sbc:SbBS512_E2799 transcriptional regulator, RpiR family; RpiR family transcriptional regulator 1382226..1383083 Escherichia coli KO11FL 11776220 YP_005277001.1 CDS EKO11_1303 NC_016902.1 1383212 1384003 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: eoh:ECO103_2944 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 1383212..1384003 Escherichia coli KO11FL 11776221 YP_005277002.1 CDS EKO11_1304 NC_016902.1 1384174 1385190 D KEGG: eoh:ECO103_2943 thiosulfate transporter subunit; TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; sulfate ABC transporter, periplasmic sulfate-binding protein 1384174..1385190 Escherichia coli KO11FL 11776222 YP_005277003.1 CDS EKO11_1305 NC_016902.1 1385190 1386023 D KEGG: sbc:SbBS512_E2796 sulfate/thiosulfate transporter subunit; TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component; sulfate ABC transporter permease 1385190..1386023 Escherichia coli KO11FL 11776223 YP_005277004.1 CDS EKO11_1306 NC_016902.1 1386023 1386898 D KEGG: eoi:ECO111_3152 sulfate/thiosulfate transporter permease subunit; TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component; sulfate ABC transporter permease 1386023..1386898 Escherichia coli KO11FL 11776224 YP_005277005.1 CDS EKO11_1307 NC_016902.1 1386888 1387985 D TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: eoh:ECO103_2940 sulfate/thiosulfate transporter subunit; SMART: AAA ATPase; sulfate ABC transporter ATPase 1386888..1387985 Escherichia coli KO11FL 11776225 YP_005277006.1 CDS EKO11_1308 NC_016902.1 1388119 1389030 D KEGG: ssn:SSON_2510 cysteine synthase B; TIGRFAM: cysteine synthase B; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; cysteine synthase B 1388119..1389030 Escherichia coli KO11FL 11776226 YP_005277007.1 CDS EKO11_1309 NC_016902.1 1389033 1389401 R KEGG: eoh:ECO103_2938 hypothetical protein; hypothetical protein complement(1389033..1389401) Escherichia coli KO11FL 11776227 YP_005277008.1 CDS EKO11_1310 NC_016902.1 1389506 1390357 D KEGG: ssn:SSON_2508 pyridoxal kinase; TIGRFAM: pyridoxal kinase; PFAM: Phosphomethylpyrimidine kinase type-1; pyridoxal kinase 1389506..1390357 Escherichia coli KO11FL 11776228 YP_005277009.1 CDS EKO11_1311 NC_016902.1 1390399 1390908 R KEGG: ssn:SSON_2506 PTS system glucose-specific transporter subunit; TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain; PTS system glucose subfamily transporter subunit IIA complement(1390399..1390908) Escherichia coli KO11FL 11776229 YP_005277010.1 CDS EKO11_1312 NC_016902.1 1390949 1392676 R KEGG: sdy:SDY_2613 phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region; phosphoenolpyruvate-protein phosphotransferase complement(1390949..1392676) Escherichia coli KO11FL 11776230 YP_005277011.1 CDS EKO11_1313 NC_016902.1 1392721 1392978 R KEGG: cro:ROD_23741 phosphocarrier protein HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; phosphotransferase system, phosphocarrier protein HPr complement(1392721..1392978) Escherichia coli KO11FL 11779417 YP_005277012.1 CDS EKO11_1314 NC_016902.1 1393362 1394333 R KEGG: sbc:SbBS512_E2766 cysteine synthase A; TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; cysteine synthase A complement(1393362..1394333) Escherichia coli KO11FL 11776231 YP_005277013.1 CDS EKO11_1315 NC_016902.1 1394518 1395279 R KEGG: eoh:ECO103_2932 putative sulfate transport protein CysZ; putative sulfate transport protein CysZ complement(1394518..1395279) Escherichia coli KO11FL 11776232 YP_005277014.1 CDS EKO11_1316 NC_016902.1 1395509 1396495 D TIGRFAM: cell division protein ZipA; PFAM: ZipA FtsZ-binding region protein; KEGG: sfv:SFV_2464 cell division protein ZipA; SMART: ZipA FtsZ-binding region protein; cell division protein ZipA 1395509..1396495 Escherichia coli KO11FL 11776233 YP_005277015.1 CDS EKO11_1317 NC_016902.1 1396566 1398581 D TIGRFAM: DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; NAD-dependent DNA ligase OB-fold; helix-hairpin-helix motif; BRCT domain protein; KEGG: eoh:ECO103_2930 NAD-dependent DNA ligase LigA; SMART: NAD-dependent DNA ligase ; Helix-hairpin-helix DNA-binding class 1; BRCT domain protein; NAD-dependent DNA ligase 1396566..1398581 Escherichia coli KO11FL 11776234 YP_005277016.1 CDS EKO11_1318 NC_016902.1 1398583 1398801 D KEGG: sdy:SDY_2607 hypothetical protein; hypothetical protein 1398583..1398801 Escherichia coli KO11FL 11776235 YP_005277017.1 CDS EKO11_1319 NC_016902.1 1398798 1399796 R PFAM: Bile acid:sodium symporter; KEGG: ssn:SSON_2498 putative cytochrome oxidase; bile acid:sodium symporter complement(1398798..1399796) Escherichia coli KO11FL 11776236 YP_005277018.1 CDS EKO11_1320 NC_016902.1 1399886 1400812 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sbc:SbBS512_E2773 transcriptional regulator, LysR family; LysR family transcriptional regulator 1399886..1400812 Escherichia coli KO11FL 11776237 YP_005277019.1 CDS EKO11_1321 NC_016902.1 1400803 1401144 R KEGG: sbc:SbBS512_E2772 hypothetical protein; hypothetical protein complement(1400803..1401144) Escherichia coli KO11FL 11776238 YP_005277020.1 CDS EKO11_1322 NC_016902.1 1402076 1403491 D KEGG: sfx:S2605 glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; glutamyl-tRNA synthetase 1402076..1403491 Escherichia coli KO11FL 11776243 YP_005277021.1 CDS EKO11_1323 NC_016902.1 1403543 1403935 R KEGG: sbc:SbBS512_E2780 hypothetical protein; manually curated; PFAM: protein of unknown function DUF1323; hypothetical protein complement(1403543..1403935) Escherichia coli KO11FL 11776244 YP_005277022.1 CDS EKO11_1324 NC_016902.1 1403937 1404296 R PFAM: protein of unknown function DUF1323; KEGG: sdy:SDY_2596 hypothetical protein; hypothetical protein complement(1403937..1404296) Escherichia coli KO11FL 11776245 YP_005277023.1 CDS EKO11_1325 NC_016902.1 1404856 1407105 D manually curated; PFAM: EAL domain protein; MASE1 domain protein; GGDEF domain containing protein; KEGG: sbo:SBO_2421 hypothetical protein; SMART: EAL domain protein; GGDEF domain containing protein; diguanylate cyclase/phosphodiesterase 1404856..1407105 Escherichia coli KO11FL 11776247 YP_005277024.1 CDS EKO11_1326 NC_016902.1 1407155 1408357 R KEGG: sdy:SDY_2593 permease of transport system for 3 nucleosides; TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter domain protein; Na+ dependent nucleoside transporter; nucleoside recognition domain protein; nucleoside transporter complement(1407155..1408357) Escherichia coli KO11FL 11776248 YP_005277025.1 CDS EKO11_1327 NC_016902.1 1408694 1409932 D KEGG: sbc:SbBS512_E2760 manganese transport protein MntH; TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; NRAMP family Mn2+/Fe2+ transporter 1408694..1409932 Escherichia coli KO11FL 11776249 YP_005277026.1 CDS EKO11_1328 NC_016902.1 1410073 1410399 R PFAM: Protein of unknown function DUF2502; KEGG: sbc:SbBS512_E2759 hypothetical protein; hypothetical protein complement(1410073..1410399) Escherichia coli KO11FL 11779419 YP_005277027.1 CDS EKO11_1329 NC_016902.1 1410514 1411770 R PFAM: Cl- channel voltage-gated family protein; KEGG: sbc:SbBS512_E2758 hypothetical protein; Cl- channel voltage-gated family protein complement(1410514..1411770) Escherichia coli KO11FL 11776250 YP_005277028.1 CDS EKO11_1330 NC_016902.1 1411974 1412939 D TIGRFAM: glucokinase; KEGG: ssn:SSON_2480 glucokinase; PFAM: Glucokinase; glucokinase 1411974..1412939 Escherichia coli KO11FL 11776251 YP_005277029.1 CDS EKO11_1331 NC_016902.1 1413158 1413484 D TIGRFAM: PTS system, fructose-specific, IIB subunnit; KEGG: eoh:ECO103_2912 putative enzyme IIB component of PTS; PTS system fructose-specific transporter subunit IIB 1413158..1413484 Escherichia coli KO11FL 11776252 YP_005277030.1 CDS EKO11_1332 NC_016902.1 1413506 1414753 D KEGG: sbc:SbBS512_E2755 PTS system, fructose-like, IIC component; TIGRFAM: PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system EIIC; PTS system fructose subfamily transporter subunit IIC 1413506..1414753 Escherichia coli KO11FL 11776253 YP_005277031.1 CDS EKO11_1333 NC_016902.1 1414768 1415853 D PFAM: peptidase M24; creatinase; KEGG: sbo:SBO_2411 aminopeptidase; peptidase M24 1414768..1415853 Escherichia coli KO11FL 11776254 YP_005277032.1 CDS EKO11_1334 NC_016902.1 1415853 1416890 D KEGG: ebw:BWG_2152 exoaminopeptidase; PFAM: peptidase M42 family protein; glutamyl aminopeptidase 1415853..1416890 Escherichia coli KO11FL 11776255 YP_005277033.1 CDS EKO11_1335 NC_016902.1 1416915 1419410 D KEGG: eoh:ECO103_2908 fused putative PTS enzymes: HPr component/enzyme I component/enzyme IIA component; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PTS system, fructose subfamily, IIA subunit; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; phosphoryl transfer system HPr; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphoenolpyruvate-protein phosphotransferase 1416915..1419410 Escherichia coli KO11FL 11776256 YP_005277034.1 CDS EKO11_1336 NC_016902.1 1419413 1420270 R KEGG: ssn:SSON_2474 putative AraC-type regulatory protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(1419413..1420270) Escherichia coli KO11FL 11776257 YP_005277035.1 CDS EKO11_1337 NC_016902.1 1420283 1421017 R KEGG: sbc:SbBS512_E2750 response regulator; PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver; LytTR family two component transcriptional regulator complement(1420283..1421017) Escherichia coli KO11FL 11776258 YP_005277036.1 CDS EKO11_1338 NC_016902.1 1421032 1422729 R KEGG: sbo:SBO_2406 putative sensor protein; PFAM: histidine kinase internal region; 5TM Receptors of the LytS-YhcK type transmembrane region; GAF domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; signal transduction histidine kinase LytS complement(1421032..1422729) Escherichia coli KO11FL 11779420 YP_005277037.1 CDS EKO11_1339 NC_016902.1 1423106 1424344 D PFAM: aminotransferase class I and II; KEGG: ebd:ECBD_1293 aminotransferase; class I and II aminotransferase 1423106..1424344 Escherichia coli KO11FL 11776259 YP_005277038.1 CDS EKO11_1340 NC_016902.1 1424836 1425822 R manually curated; TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; KEGG: sfv:SFV_2436 lipid A biosynthesis palmitoleoyl acyltransferase; PFAM: lipid A biosynthesis acyltransferase; lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase complement(1424836..1425822) Escherichia coli KO11FL 11779421 YP_005277039.1 CDS EKO11_1341 NC_016902.1 1426109 1426351 D KEGG: sdy:SDY_2575 hypothetical protein; hypothetical protein 1426109..1426351 Escherichia coli KO11FL 11776260 YP_005277040.1 CDS EKO11_1342 NC_016902.1 1426428 1426703 R KEGG: ssn:SSON_2467 hypothetical protein; hypothetical protein complement(1426428..1426703) Escherichia coli KO11FL 11776261 YP_005277041.1 CDS EKO11_1343 NC_016902.1 1426999 1427631 D KEGG: sdy:SDY_2573 hypothetical protein; hypothetical protein 1426999..1427631 Escherichia coli KO11FL 11776262 YP_005277042.1 CDS EKO11_1344 NC_016902.1 1428144 1429394 D KEGG: sbo:SBO_2400 formyl-coenzyme A transferase; TIGRFAM: formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F; formyl-CoA transferase 1428144..1429394 Escherichia coli KO11FL 11776263 YP_005277043.1 CDS EKO11_1345 NC_016902.1 1429448 1431142 D KEGG: ssn:SSON_2464 putative oxalyl-CoA decarboxylase; TIGRFAM: oxalyl-CoA decarboxylase; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; oxalyl-CoA decarboxylase 1429448..1431142 Escherichia coli KO11FL 11776264 YP_005277044.1 CDS EKO11_1346 NC_016902.1 1431212 1432156 D PFAM: Auxin Efflux Carrier; KEGG: sdy:SDY_2570 putative transporter YfdV; auxin efflux carrier family protein 1431212..1432156 Escherichia coli KO11FL 11776265 YP_005277045.1 CDS EKO11_1347 NC_016902.1 1432230 1433375 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ebd:ECBD_1301 hypothetical protein; L-carnitine dehydratase/bile acid-inducible protein F 1432230..1433375 Escherichia coli KO11FL 11776266 YP_005277046.1 CDS EKO11_1348 NC_016902.1 1433431 1437024 R KEGG: eoi:ECO111_3106 hybrid sensory histidine kinase in two-component regulatory system with EvgA; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; extracellular solute-binding protein family 3; Hpt domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; extracellular solute-binding protein family 3; Hpt domain protein; Hpt sensor hybrid histidine kinase complement(1433431..1437024) Escherichia coli KO11FL 11776267 YP_005277047.1 CDS EKO11_1349 NC_016902.1 1437029 1437643 R KEGG: sdy:SDY_4477 DNA-binding transcriptional activator EvgA; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; two component transcriptional regulator, LuxR family complement(1437029..1437643) Escherichia coli KO11FL 11776268 YP_005277048.1 CDS EKO11_1350 NC_016902.1 1438059 1439222 D KEGG: ebd:ECBD_1304 efflux pump membrane protein; TIGRFAM: efflux pump membrane protein; PFAM: secretion protein HlyD family protein; efflux pump membrane protein 1438059..1439222 Escherichia coli KO11FL 11779422 YP_005277049.1 CDS EKO11_1351 NC_016902.1 1439222 1440760 D KEGG: sbo:SBO_2393 multidrug resistance protein Y; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA subfamily drug resistance transporter 1439222..1440760 Escherichia coli KO11FL 11779423 YP_005277050.1 CDS EKO11_1352 NC_016902.1 1440868 1442196 R TIGRFAM: D-serine ammonia-lyase; KEGG: ebw:BWG_2134 D-serine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; D-serine ammonia-lyase complement(1440868..1442196) Escherichia coli KO11FL 11776269 YP_005277051.1 CDS EKO11_1354 NC_016902.1 1442663 1443658 D manually curated; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; KEGG: eoh:ECO103_2889 sucrose operon repressor; SMART: regulatory protein LacI; LacI family transcriptional regulator 1442663..1443658 Escherichia coli KO11FL 11776271 YP_005277052.1 CDS EKO11_1355 NC_016902.1 1443666 1445099 R TIGRFAM: sucrose-6-phosphate hydrolase; PFAM: Glycosyl hydrolase family 32 domain protein; KEGG: eoh:ECO103_2888 sucrose-6 phosphate hydrolase; SMART: glycoside hydrolase family 32; sucrose-6-phosphate hydrolase complement(1443666..1445099) Escherichia coli KO11FL 11776272 YP_005277053.1 CDS EKO11_1356 NC_016902.1 1445315 1446229 D PFAM: PfkB domain protein; KEGG: eoh:ECO103_2887 aminoimidazole riboside kinase; PfkB domain-containing protein 1445315..1446229 Escherichia coli KO11FL 11776273 YP_005277054.1 CDS EKO11_1357 NC_016902.1 1446301 1447548 D TIGRFAM: oligosaccharide/H+ symporter, major facilitator superfamily (MFS); KEGG: eoh:ECO103_2886 galactoside permease; oligosaccharide/H+ symporter, major facilitator superfamily (MFS) 1446301..1447548 Escherichia coli KO11FL 11776274 YP_005277055.1 CDS EKO11_1359 NC_016902.1 1448078 1448278 R KEGG: eoj:ECO26_3393 hypothetical protein; hypothetical protein complement(1448078..1448278) Escherichia coli KO11FL 11776276 YP_005277056.1 CDS EKO11_1360 NC_016902.1 1448402 1448746 R KEGG: eoi:ECO111_2978 hypothetical protein; hypothetical protein complement(1448402..1448746) Escherichia coli KO11FL 11776277 YP_005277057.1 CDS EKO11_1361 NC_016902.1 1448804 1449604 R KEGG: bge:BC1002_6529 hypothetical protein; hypothetical protein complement(1448804..1449604) Escherichia coli KO11FL 11776278 YP_005277058.1 CDS EKO11_1362 NC_016902.1 1449647 1449931 R PFAM: protein of unknown function DUF437; KEGG: ebr:ECB_00727 phage related protein; hypothetical protein complement(1449647..1449931) Escherichia coli KO11FL 11776279 YP_005277059.1 CDS EKO11_1363 NC_016902.1 1449924 1450613 R PFAM: protein of unknown function DUF551; KEGG: eoh:ECO103_1185 hypothetical protein; hypothetical protein complement(1449924..1450613) Escherichia coli KO11FL 11779424 YP_005277060.1 CDS EKO11_1364 NC_016902.1 1450615 1451214 R PFAM: protein of unknown function DUF550; KEGG: eoj:ECO26_3387 hypothetical protein; hypothetical protein complement(1450615..1451214) Escherichia coli KO11FL 11776280 YP_005277061.1 CDS EKO11_1365 NC_016902.1 1451211 1451855 R KEGG: shw:Sputw3181_2519 hypothetical protein; hypothetical protein complement(1451211..1451855) Escherichia coli KO11FL 11776281 YP_005277062.1 CDS EKO11_1366 NC_016902.1 1451852 1452370 R KEGG: seh:SeHA_C0371 hypothetical protein; hypothetical protein complement(1451852..1452370) Escherichia coli KO11FL 11776282 YP_005277063.1 CDS EKO11_1367 NC_016902.1 1452367 1452531 R manually curated; KEGG: sew:SeSA_A0608 hypothetical protein; hypothetical protein complement(1452367..1452531) Escherichia coli KO11FL 11776283 YP_005277064.1 CDS EKO11_1368 NC_016902.1 1452542 1452835 R PFAM: Bacteriophage P22, anti-RecBCD protein 2; KEGG: eoj:ECO26_0836 hypothetical protein; Bacteriophage P22, anti-RecBCD protein 2 complement(1452542..1452835) Escherichia coli KO11FL 11776284 YP_005277065.1 CDS EKO11_1369 NC_016902.1 1452852 1453400 R KEGG: sec:SC0331 endodeoxyribonuclease; endodeoxyribonuclease complement(1452852..1453400) Escherichia coli KO11FL 11776285 YP_005277066.1 CDS EKO11_1370 NC_016902.1 1453409 1453924 R KEGG: sed:SeD_A0611 single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; single-strand binding protein complement(1453409..1453924) Escherichia coli KO11FL 11776286 YP_005277067.1 CDS EKO11_1371 NC_016902.1 1453925 1454632 R PFAM: Rad52/22 double-strand break repair protein; KEGG: sec:SC0333 hypothetical protein; Rad52/22 double-strand break repair protein complement(1453925..1454632) Escherichia coli KO11FL 11776287 YP_005277068.1 CDS EKO11_1374 NC_016902.1 1455243 1455431 R hypothetical protein complement(1455243..1455431) Escherichia coli KO11FL 11776290 YP_005277069.1 CDS EKO11_1375 NC_016902.1 1455431 1455760 R KEGG: esa:ESA_03091 hypothetical protein; hypothetical protein complement(1455431..1455760) Escherichia coli KO11FL 11776291 YP_005277070.1 CDS EKO11_1376 NC_016902.1 1455813 1456178 R KEGG: eok:G2583_0951 gene 34 protein; gene 34 protein complement(1455813..1456178) Escherichia coli KO11FL 11776292 YP_005277071.1 CDS EKO11_1377 NC_016902.1 1456236 1456514 R KEGG: plu:plu2928 hypothetical protein; hypothetical protein complement(1456236..1456514) Escherichia coli KO11FL 11776293 YP_005277072.1 CDS EKO11_1378 NC_016902.1 1456517 1456825 R KEGG: efe:EFER_2075 conserved hypothetical protein from phage origin; hypothetical protein complement(1456517..1456825) Escherichia coli KO11FL 11776294 YP_005277073.1 CDS EKO11_1379 NC_016902.1 1457179 1457832 R KEGG: eok:G2583_0954 CI protein; PFAM: Peptidase S24/S26A/S26B, conserved region; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; phage repressor like transcriptional regulator, XRE family complement(1457179..1457832) Escherichia coli KO11FL 11776295 YP_005277074.1 CDS EKO11_1380 NC_016902.1 1457923 1458165 D manually curated; PFAM: helix-turn-helix domain protein; KEGG: eok:G2583_0955 hypothetical protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 1457923..1458165 Escherichia coli KO11FL 11776296 YP_005277075.1 CDS EKO11_1381 NC_016902.1 1458275 1458571 D PFAM: CII family protein; KEGG: efe:EFER_2070 regulatory protein CII from phage origin; CII family protein 1458275..1458571 Escherichia coli KO11FL 11776297 YP_005277076.1 CDS EKO11_1382 NC_016902.1 1458604 1458750 D KEGG: eoi:ECO111_2710 hypothetical protein; hypothetical protein 1458604..1458750 Escherichia coli KO11FL 11776298 YP_005277077.1 CDS EKO11_1383 NC_016902.1 1458743 1459642 D KEGG: eoi:ECO111_2709 putative replication protein; putative replication protein 1458743..1459642 Escherichia coli KO11FL 11776299 YP_005277078.1 CDS EKO11_1384 NC_016902.1 1459632 1461068 D KEGG: sfv:SFV_0273 replication protein P; TIGRFAM: phage replicative helicase, DnaB family; PFAM: DnaB domain protein helicase domain protein; phage replicative helicase, DnaB family 1459632..1461068 Escherichia coli KO11FL 11776300 YP_005277079.1 CDS EKO11_1385 NC_016902.1 1461463 1461909 D PFAM: NinB family protein; KEGG: eoj:ECO26_3197 hypothetical protein; NinB family protein 1461463..1461909 Escherichia coli KO11FL 11776301 YP_005277080.1 CDS EKO11_1386 NC_016902.1 1461906 1462433 D KEGG: eoj:ECO26_3196 putative DNA methylase; TIGRFAM: phage N-6-adenine-methyltransferase; PFAM: DNA N-6-adenine-methyltransferase; phage N-6-adenine-methyltransferase 1461906..1462433 Escherichia coli KO11FL 11776302 YP_005277081.1 CDS EKO11_1387 NC_016902.1 1462430 1462606 D KEGG: eoj:ECO26_1594 hypothetical protein; manually curated; PFAM: NINE family protein; NINE family protein 1462430..1462606 Escherichia coli KO11FL 11776303 YP_005277082.1 CDS EKO11_1388 NC_016902.1 1462609 1462968 D KEGG: eoi:ECO111_0799 hypothetical protein; hypothetical protein 1462609..1462968 Escherichia coli KO11FL 11776304 YP_005277083.1 CDS EKO11_1389 NC_016902.1 1462968 1463144 D PFAM: NinF family protein; KEGG: sek:SSPA2242 hypothetical protein; NinF family protein 1462968..1463144 Escherichia coli KO11FL 11776305 YP_005277084.1 CDS EKO11_1391 NC_016902.1 1463858 1464148 D PFAM: protein of unknown function DUF1364; KEGG: sek:SSPA2241 hypothetical protein; hypothetical protein 1463858..1464148 Escherichia coli KO11FL 11776307 YP_005277085.1 CDS EKO11_1392 NC_016902.1 1464145 1464507 D KEGG: eoj:ECO26_0855 putative Holliday-junction resolvase; PFAM: endodeoxyribonuclease RusA; Crossover junction endodeoxyribonuclease 1464145..1464507 Escherichia coli KO11FL 11776308 YP_005277086.1 CDS EKO11_1393 NC_016902.1 1464504 1464692 D PFAM: NinH family protein; KEGG: sek:SSPA2239 hypothetical protein; NinH family protein 1464504..1464692 Escherichia coli KO11FL 11776309 YP_005277087.1 CDS EKO11_1394 NC_016902.1 1464689 1465312 D PFAM: antitermination protein; KEGG: sfv:SFV_0277 putative antitermination protein; antitermination protein 1464689..1465312 Escherichia coli KO11FL 11776310 YP_005277088.1 CDS EKO11_1395 NC_016902.1 1465746 1466069 D KEGG: sfv:SFV_0278 cell lysis protein; TIGRFAM: phage holin, lambda family; PFAM: Holin phage lambda; phage holin, lambda family 1465746..1466069 Escherichia coli KO11FL 11776311 YP_005277089.1 CDS EKO11_1396 NC_016902.1 1466053 1466529 D KEGG: eoj:ECO26_3358 putative endolysin; PFAM: glycoside hydrolase family 24; lysozyme 1466053..1466529 Escherichia coli KO11FL 11779425 YP_005277090.1 CDS EKO11_1397 NC_016902.1 1466526 1466993 D PFAM: lysis protein; KEGG: eok:G2583_0971 bacteriophage lysis protein; lysis protein 1466526..1466993 Escherichia coli KO11FL 11779426 YP_005277091.1 CDS EKO11_1398 NC_016902.1 1466981 1467133 D KEGG: eok:G2583_1727 hypothetical protein; hypothetical protein 1466981..1467133 Escherichia coli KO11FL 11776312 YP_005277092.1 CDS EKO11_1399 NC_016902.1 1467337 1467822 D KEGG: ses:SARI_02654 hypothetical protein; hypothetical protein 1467337..1467822 Escherichia coli KO11FL 11776313 YP_005277093.1 CDS EKO11_1400 NC_016902.1 1468071 1468313 D KEGG: sec:SC0353 hypothetical protein; hypothetical protein 1468071..1468313 Escherichia coli KO11FL 11776314 YP_005277094.1 CDS EKO11_1401 NC_016902.1 1468393 1468881 D KEGG: efe:EFER_2046 DNA packaging protein gp3 (terminase small subunit); DNA packaging protein gp3 (terminase small subunit) 1468393..1468881 Escherichia coli KO11FL 11776315 YP_005277095.1 CDS EKO11_1402 NC_016902.1 1468859 1470358 D KEGG: efe:EFER_2045 DNA packaging protein gp2 (terminase large subunit); DNA packaging protein gp2 (terminase large subunit) 1468859..1470358 Escherichia coli KO11FL 11779427 YP_005277096.1 CDS EKO11_1403 NC_016902.1 1470359 1472524 D KEGG: efe:EFER_2044 portal protein (protein gp1); portal protein (protein gp1) 1470359..1472524 Escherichia coli KO11FL 11776316 YP_005277097.1 CDS EKO11_1404 NC_016902.1 1472538 1473449 D KEGG: efe:EFER_2043 scaffolding protein (protein gp8); scaffolding protein (protein gp8) 1472538..1473449 Escherichia coli KO11FL 11779428 YP_005277098.1 CDS EKO11_1405 NC_016902.1 1473449 1474744 D KEGG: sfv:SFV_0222 putative coat protein; putative coat protein 1473449..1474744 Escherichia coli KO11FL 11779429 YP_005277099.1 CDS EKO11_1406 NC_016902.1 1474789 1475043 D KEGG: efe:EFER_2041 hypothetical protein; hypothetical protein 1474789..1475043 Escherichia coli KO11FL 11776317 YP_005277100.1 CDS EKO11_1407 NC_016902.1 1475021 1475521 D KEGG: sfv:SFV_0224 putative DNA stabilization protein; putative DNA stabilization protein 1475021..1475521 Escherichia coli KO11FL 11776318 YP_005277101.1 CDS EKO11_1408 NC_016902.1 1475521 1476939 D KEGG: sfv:SFV_0225 putative packaged DNA stabilization protein; putative packaged DNA stabilization protein 1475521..1476939 Escherichia coli KO11FL 11776319 YP_005277102.1 CDS EKO11_1409 NC_016902.1 1476939 1477787 D PFAM: Tropomyosin; KEGG: eoj:ECO26_3344 putative head DNA stabilization protein; Tropomyosin 1476939..1477787 Escherichia coli KO11FL 11776320 YP_005277103.1 CDS EKO11_1410 NC_016902.1 1477787 1478242 D KEGG: eoj:ECO26_3343 putative head assembly protein; putative head assembly protein 1477787..1478242 Escherichia coli KO11FL 11776321 YP_005277104.1 CDS EKO11_1411 NC_016902.1 1478245 1478937 D KEGG: sfv:SFV_0228 putative DNA transfer protein; putative DNA transfer protein 1478245..1478937 Escherichia coli KO11FL 11776322 YP_005277105.1 CDS EKO11_1412 NC_016902.1 1478947 1480335 D KEGG: sec:SC0363 DNA transfer protein GP20; DNA transfer protein GP20 1478947..1480335 Escherichia coli KO11FL 11776323 YP_005277106.1 CDS EKO11_1413 NC_016902.1 1480335 1482332 D KEGG: seh:SeHA_C0411 hypothetical protein; hypothetical protein 1480335..1482332 Escherichia coli KO11FL 11776324 YP_005277107.1 CDS EKO11_1414 NC_016902.1 1482422 1482682 R KEGG: eoj:ECO26_3338 putative transcriptional repressor protein; putative transcriptional repressor protein complement(1482422..1482682) Escherichia coli KO11FL 11776325 YP_005277108.1 CDS EKO11_1415 NC_016902.1 1482804 1485002 D PFAM: P22 tailspike protein head-binding; KEGG: eoi:ECO111_2662 putative tail spike protein; P22 tailspike protein head-binding protein 1482804..1485002 Escherichia coli KO11FL 11779430 YP_005277109.1 CDS EKO11_1416 NC_016902.1 1485035 1486162 R PFAM: acyltransferase 3; KEGG: efe:EFER_0626 hypothetical protein; acyltransferase 3 complement(1485035..1486162) Escherichia coli KO11FL 11776326 YP_005277110.1 CDS EKO11_1417 NC_016902.1 1486408 1487565 R PFAM: integrase family protein; KEGG: eoj:ECO26_3335 putative integrase; integrase family protein complement(1486408..1487565) Escherichia coli KO11FL 11776327 YP_005277111.1 CDS EKO11_1418 NC_016902.1 1487877 1488809 R PFAM: formate/nitrite transporter; KEGG: sdy:SDY_2551 putative transport; formate/nitrite transporter complement(1487877..1488809) Escherichia coli KO11FL 11776329 YP_005277112.1 CDS EKO11_1419 NC_016902.1 1488907 1489077 D manually curated; KEGG: ebd:ECBD_1310 hypothetical protein; hypothetical protein 1488907..1489077 Escherichia coli KO11FL 11776330 YP_005277113.1 CDS EKO11_1420 NC_016902.1 1489103 1489858 D PFAM: VacJ family lipoprotein; KEGG: sdy:SDY_2550 lipoprotein precursor; VacJ family lipoprotein 1489103..1489858 Escherichia coli KO11FL 11776331 YP_005277114.1 CDS EKO11_1421 NC_016902.1 1490040 1491098 R KEGG: eoi:ECO111_3092 hypothetical protein; hypothetical protein complement(1490040..1491098) Escherichia coli KO11FL 11776332 YP_005277115.1 CDS EKO11_1422 NC_016902.1 1491463 1492803 R PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: ssn:SSON_2400 long-chain fatty acid outer membrane transporter; aromatic hydrocarbon degradation membrane protein complement(1491463..1492803) Escherichia coli KO11FL 11776333 YP_005277116.1 CDS EKO11_1423 NC_016902.1 1493175 1493459 D PFAM: Conserved hypothetical protein CHP00743; KEGG: eoh:ECO103_2807 hypothetical protein; hypothetical protein 1493175..1493459 Escherichia coli KO11FL 11779431 YP_005277117.1 CDS EKO11_1424 NC_016902.1 1493639 1494949 D TIGRFAM: acetyl-CoA C-acyltransferase FadI; acetyl-CoA acetyltransferase; KEGG: eoi:ECO111_3089 3-ketoacyl-CoA thiolase; PFAM: Thiolase-like; acetyl-CoA C-acyltransferase FadI 1493639..1494949 Escherichia coli KO11FL 11779432 YP_005277118.1 CDS EKO11_1425 NC_016902.1 1494949 1497093 D KEGG: eoh:ECO103_2805 multifunctional fatty acid oxidation complex subunit alpha; TIGRFAM: fatty acid oxidation complex, alpha subunit FadJ; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; fatty acid oxidation complex subunit FadJ 1494949..1497093 Escherichia coli KO11FL 11776334 YP_005277119.1 CDS EKO11_1426 NC_016902.1 1497296 1497781 D KEGG: sbc:SbBS512_E2719 phosphohistidine phosphatase; TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase; phosphohistidine phosphatase, SixA 1497296..1497781 Escherichia coli KO11FL 11776335 YP_005277120.1 CDS EKO11_1427 NC_016902.1 1498456 1499019 D PFAM: Fimbrial protein domain-containing protein; KEGG: eoh:ECO103_2803 fimbrial-like protein; fimbrial protein domain-containing protein 1498456..1499019 Escherichia coli KO11FL 11776336 YP_005277121.1 CDS EKO11_1428 NC_016902.1 1499101 1501743 D PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: eoh:ECO103_2802 putative outer membrane usher protein; fimbrial biogenesis outer membrane usher protein 1499101..1501743 Escherichia coli KO11FL 11776337 YP_005277122.1 CDS EKO11_1429 NC_016902.1 1501763 1502515 D PFAM: Pili assembly chaperone, N-terminal; KEGG: eoh:ECO103_2801 putative chaperone; Pili assembly chaperone, N-terminal protein 1501763..1502515 Escherichia coli KO11FL 11776338 YP_005277123.1 CDS EKO11_1430 NC_016902.1 1502532 1503038 D KEGG: eoh:ECO103_2800 putative fimbrial protein; putative fimbrial protein 1502532..1503038 Escherichia coli KO11FL 11776339 YP_005277124.1 CDS EKO11_1431 NC_016902.1 1503035 1503505 D PFAM: Fimbrial protein domain-containing protein; KEGG: eoh:ECO103_2799 putative fimbrial subunit protein; fimbrial protein domain-containing protein 1503035..1503505 Escherichia coli KO11FL 11776340 YP_005277125.1 CDS EKO11_1432 NC_016902.1 1503502 1504026 D PFAM: Fimbrial protein domain-containing protein; KEGG: ssn:SSON_2391 putative minor fimbrial subunit; fimbrial protein domain-containing protein 1503502..1504026 Escherichia coli KO11FL 11776341 YP_005277126.1 CDS EKO11_1433 NC_016902.1 1504118 1504885 D KEGG: sfv:SFV_2401 hypothetical protein; hypothetical protein 1504118..1504885 Escherichia coli KO11FL 11776342 YP_005277127.1 CDS EKO11_1434 NC_016902.1 1505007 1505558 R KEGG: sbc:SbBS512_E2709 hypothetical protein; PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2; Smr protein/MutS2 complement(1505007..1505558) Escherichia coli KO11FL 11776343 YP_005277128.1 CDS EKO11_1435 NC_016902.1 1505724 1506656 D KEGG: sdy:SDY_2530 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; TIGRFAM: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific; modification methylase, HemK family; PFAM: methyltransferase small; protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 1505724..1506656 Escherichia coli KO11FL 11776344 YP_005277129.1 CDS EKO11_1436 NC_016902.1 1506691 1507776 D TIGRFAM: chorismate synthase; KEGG: ssn:SSON_2387 chorismate synthase; PFAM: chorismate synthase; chorismate synthase 1506691..1507776 Escherichia coli KO11FL 11776345 YP_005277130.1 CDS EKO11_1437 NC_016902.1 1507780 1508604 D PFAM: peptidase U6 penicillin-insensitive murein endopeptidase; KEGG: sbc:SbBS512_E2706 penicillin-insensitive murein endopeptidase; peptidase U6 penicillin-insensitive murein endopeptidase 1507780..1508604 Escherichia coli KO11FL 11776346 YP_005277131.1 CDS EKO11_1438 NC_016902.1 1508604 1509413 D PFAM: protein of unknown function DUF81; KEGG: sbc:SbBS512_E2705 hypothetical protein; hypothetical protein 1508604..1509413 Escherichia coli KO11FL 11776347 YP_005277132.1 CDS EKO11_1439 NC_016902.1 1509413 1509961 D PFAM: protein of unknown function DUF462; KEGG: eoh:ECO103_2791 hypothetical protein; hypothetical protein 1509413..1509961 Escherichia coli KO11FL 11776348 YP_005277133.1 CDS EKO11_1440 NC_016902.1 1509995 1510273 D PFAM: YfcL protein; KEGG: sdy:SDY_2524 hypothetical protein; hypothetical protein 1509995..1510273 Escherichia coli KO11FL 11776349 YP_005277134.1 CDS EKO11_1441 NC_016902.1 1510394 1512460 R manually curated; TIGRFAM: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC; KEGG: eoh:ECO103_2788 5-methylaminomethyl-2-thiouridine methyltransferase; PFAM: protein of unknown function DUF752; FAD dependent oxidoreductase; tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC complement(1510394..1512460) Escherichia coli KO11FL 11776350 YP_005277135.1 CDS EKO11_1442 NC_016902.1 1512559 1513779 D PFAM: Beta-ketoacyl synthase; KEGG: sbo:SBO_2360 3-oxoacyl-(acyl carrier protein) synthase I; Beta-ketoacyl synthase 1512559..1513779 Escherichia coli KO11FL 11776351 YP_005277136.1 CDS EKO11_1443 NC_016902.1 1514090 1515268 D PFAM: major facilitator superfamily MFS_1; KEGG: eoh:ECO103_2786 hypothetical protein; major facilitator superfamily protein 1514090..1515268 Escherichia coli KO11FL 11779433 YP_005277137.1 CDS EKO11_1444 NC_016902.1 1515265 1516260 R KEGG: sbo:SBO_2358 flagella biosynthesis regulator; flagella biosynthesis regulator protein complement(1515265..1516260) Escherichia coli KO11FL 11776352 YP_005277138.1 CDS EKO11_1445 NC_016902.1 1516359 1517495 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: sbc:SbBS512_E2698 erythronate-4-phosphate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 1516359..1517495 Escherichia coli KO11FL 11776353 YP_005277139.1 CDS EKO11_1446 NC_016902.1 1517561 1518574 D PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding; KEGG: sbc:SbBS512_E2697 putative semialdehyde dehydrogenase; SMART: Semialdehyde dehydrogenase NAD - binding; Aspartate-semialdehyde dehydrogenase 1517561..1518574 Escherichia coli KO11FL 11776354 YP_005277140.1 CDS EKO11_1447 NC_016902.1 1518574 1519386 D KEGG: sdy:SDY_2517 tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; tRNA pseudouridine synthase A 1518574..1519386 Escherichia coli KO11FL 11776355 YP_005277141.1 CDS EKO11_1448 NC_016902.1 1519469 1520128 D PFAM: SNARE associated Golgi protein; KEGG: ssn:SSON_2375 hypothetical protein; hypothetical protein 1519469..1520128 Escherichia coli KO11FL 11776356 YP_005277142.1 CDS EKO11_1449 NC_016902.1 1520284 1521198 D KEGG: efe:EFER_0847 acetyl-CoA carboxylase subunit beta; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: carboxyl transferase; acetyl-CoA carboxylase, carboxyl transferase subunit beta 1520284..1521198 Escherichia coli KO11FL 11776357 YP_005277143.1 CDS EKO11_1450 NC_016902.1 1521268 1522536 D KEGG: sfv:SFV_2384 bifunctional folylpolyglutamate synthase/dihydrofolate synthase; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 1521268..1522536 Escherichia coli KO11FL 11776358 YP_005277144.1 CDS EKO11_1451 NC_016902.1 1522526 1523188 D PFAM: Sporulation domain-containing protein; KEGG: eoh:ECO103_2778 hypothetical protein; sporulation domain-containing protein 1522526..1523188 Escherichia coli KO11FL 11776359 YP_005277145.1 CDS EKO11_1452 NC_016902.1 1523447 1523935 D PFAM: Colicin V production protein; KEGG: eok:G2583_2850 CvpA protein; colicin V production protein 1523447..1523935 Escherichia coli KO11FL 11776360 YP_005277146.1 CDS EKO11_1453 NC_016902.1 1523972 1525489 D KEGG: sbc:SbBS512_E2690 amidophosphoribosyltransferase; TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; amidophosphoribosyltransferase 1523972..1525489 Escherichia coli KO11FL 11776361 YP_005277147.1 CDS EKO11_1454 NC_016902.1 1525584 1526153 D KEGG: sbc:SbBS512_E2689 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1525584..1526153 Escherichia coli KO11FL 11776362 YP_005277148.1 CDS EKO11_1455 NC_016902.1 1526419 1527201 D TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: sbc:SbBS512_E2688 lysine-arginine-ornithine-binding periplasmic protein; SMART: extracellular solute-binding protein family 3; cationic amino acid ABC transporter substrate-binding protein 1526419..1527201 Escherichia coli KO11FL 11776363 YP_005277149.1 CDS EKO11_1456 NC_016902.1 1527422 1528204 D TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: sbc:SbBS512_E2687 histidine ABC transporter, periplasmic histidine-binding protein; SMART: extracellular solute-binding protein family 3; cationic amino acid ABC transporter substrate-binding protein 1527422..1528204 Escherichia coli KO11FL 11776364 YP_005277150.1 CDS EKO11_1457 NC_016902.1 1528294 1528980 D KEGG: sdy:SDY_2507 histidine transport system permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 1528294..1528980 Escherichia coli KO11FL 11776365 YP_005277151.1 CDS EKO11_1458 NC_016902.1 1528977 1529693 D KEGG: sdy:SDY_2506 histidine transport, membrane protein M; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 1528977..1529693 Escherichia coli KO11FL 11776366 YP_005277152.1 CDS EKO11_1459 NC_016902.1 1529701 1530474 D KEGG: sbc:SbBS512_E2684 histidine/lysine/arginine/ornithine transporter subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1529701..1530474 Escherichia coli KO11FL 11776367 YP_005277153.1 CDS EKO11_1460 NC_016902.1 1530671 1531561 D PFAM: transposase YhgA family protein; KEGG: eoi:ECO111_3053 hypothetical protein; transposase YhgA family protein 1530671..1531561 Escherichia coli KO11FL 11776368 YP_005277154.1 CDS EKO11_1461 NC_016902.1 1531609 1532502 R PFAM: domain of unknown function DUF1731; NAD-dependent epimerase/dehydratase; KEGG: ebd:ECBD_1355 domain of unknown function DUF1731; hypothetical protein complement(1531609..1532502) Escherichia coli KO11FL 11776369 YP_005277155.1 CDS EKO11_1462 NC_016902.1 1532523 1532885 R PFAM: dihydroneopterin aldolase; KEGG: sdy:SDY_2500 D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase; dihydroneopterin aldolase complement(1532523..1532885) Escherichia coli KO11FL 11776370 YP_005277156.1 CDS EKO11_1463 NC_016902.1 1532942 1533589 R PFAM: Glutathione S-transferase domain; KEGG: sbc:SbBS512_E2678 glutathione S-transferase; glutathione S-transferase complement(1532942..1533589) Escherichia coli KO11FL 11776371 YP_005277157.1 CDS EKO11_1464 NC_016902.1 1533725 1534369 D PFAM: Glutathione S-transferase domain; KEGG: eoh:ECO103_2765 putative enzyme; glutathione S-transferase 1533725..1534369 Escherichia coli KO11FL 11776372 YP_005277158.1 CDS EKO11_1465 NC_016902.1 1534425 1534976 D KEGG: sbc:SbBS512_E2676 phosphodiesterase; TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; phosphodiesterase 1534425..1534976 Escherichia coli KO11FL 11779434 YP_005277159.1 CDS EKO11_1466 NC_016902.1 1535034 1535576 D PFAM: NUDIX hydrolase; KEGG: sbc:SbBS512_E2675 hydrolase, NUDIX family protein; NUDIX hydrolase 1535034..1535576 Escherichia coli KO11FL 11776373 YP_005277160.1 CDS EKO11_1467 NC_016902.1 1535609 1537129 R PFAM: C4-dicarboxylate anaerobic carrier-like; KEGG: eoh:ECO103_2762 hypothetical protein; C4-dicarboxylate anaerobic carrier-like protein complement(1535609..1537129) Escherichia coli KO11FL 11776374 YP_005277161.1 CDS EKO11_1468 NC_016902.1 1537319 1539463 R KEGG: sbc:SbBS512_E2673 phosphate acetyltransferase; TIGRFAM: phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase; DRTGG domain protein; phosphate acetyltransferase complement(1537319..1539463) Escherichia coli KO11FL 11776375 YP_005277162.1 CDS EKO11_1469 NC_016902.1 1539538 1540740 R KEGG: sbc:SbBS512_E2672 acetate kinase; TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; acetate kinase complement(1539538..1540740) Escherichia coli KO11FL 11776376 YP_005277163.1 CDS EKO11_1470 NC_016902.1 1541078 1541533 D PFAM: protein of unknown function DUF412; KEGG: sdy:SDY_2491 hypothetical protein; hypothetical protein 1541078..1541533 Escherichia coli KO11FL 11776377 YP_005277164.1 CDS EKO11_1471 NC_016902.1 1541616 1542110 D PFAM: YfbU family protein; KEGG: sdy:SDY_2490 hypothetical protein; YfbU family protein 1541616..1542110 Escherichia coli KO11FL 11776378 YP_005277165.1 CDS EKO11_1472 NC_016902.1 1542121 1542771 D KEGG: eoh:ECO103_2757 putative phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase 1542121..1542771 Escherichia coli KO11FL 11776379 YP_005277166.1 CDS EKO11_1473 NC_016902.1 1542858 1544690 D PFAM: Citrate transporter; TrkA-C domain protein; KEGG: ssn:SSON_2349 putative transport protein; citrate transporter 1542858..1544690 Escherichia coli KO11FL 11776380 YP_005277167.1 CDS EKO11_1474 NC_016902.1 1544749 1545348 R PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: ebd:ECBD_1368 hypothetical protein; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase complement(1544749..1545348) Escherichia coli KO11FL 11779435 YP_005277168.1 CDS EKO11_1475 NC_016902.1 1545432 1546649 R PFAM: aminotransferase class I and II; KEGG: sbc:SbBS512_E2666 aminotransferase AlaT; class I and II aminotransferase complement(1545432..1546649) Escherichia coli KO11FL 11776381 YP_005277169.1 CDS EKO11_1476 NC_016902.1 1547075 1547329 R manually curated; KEGG: ebd:ECBD_1370 hypothetical protein; hypothetical protein complement(1547075..1547329) Escherichia coli KO11FL 11776382 YP_005277170.1 CDS EKO11_1477 NC_016902.1 1547569 1548507 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sbc:SbBS512_E2665 transcriptional regulator LrhA; LysR family transcriptional regulator 1547569..1548507 Escherichia coli KO11FL 11776383 YP_005277171.1 CDS EKO11_1478 NC_016902.1 1548711 1548875 R KEGG: ebd:ECBD_1372 hypothetical protein; hypothetical protein complement(1548711..1548875) Escherichia coli KO11FL 11776384 YP_005277172.1 CDS EKO11_1479 NC_016902.1 1549138 1549581 D PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: sdy:SDY_2484 NADH dehydrogenase subunit A; NADH-ubiquinone/plastoquinone oxidoreductase chain 3 1549138..1549581 Escherichia coli KO11FL 11776385 YP_005277173.1 CDS EKO11_1480 NC_016902.1 1549597 1550259 D TIGRFAM: NADH-quinone oxidoreductase, B subunit; KEGG: sbc:SbBS512_E2663 NADH dehydrogenase subunit B; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; NADH-quinone oxidoreductase subunit B 1549597..1550259 Escherichia coli KO11FL 11779436 YP_005277174.1 CDS EKO11_1481 NC_016902.1 1550353 1552155 D KEGG: sdy:SDY_2482 bifunctional NADH:ubiquinone oxidoreductase subunit C/D; TIGRFAM: NADH dehydrogenase I, D subunit; NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH dehydrogenase I subunit D 1550353..1552155 Escherichia coli KO11FL 11776386 YP_005277175.1 CDS EKO11_1482 NC_016902.1 1552158 1552658 D KEGG: sbc:SbBS512_E2661 NADH dehydrogenase subunit E; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; NADH-quinone oxidoreductase subunit E 1552158..1552658 Escherichia coli KO11FL 11776387 YP_005277176.1 CDS EKO11_1483 NC_016902.1 1552655 1553992 D TIGRFAM: NADH-quinone oxidoreductase, F subunit; KEGG: sbc:SbBS512_E2660 NADH dehydrogenase I subunit F; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; NADH-quinone oxidoreductase subunit F 1552655..1553992 Escherichia coli KO11FL 11776388 YP_005277177.1 CDS EKO11_1484 NC_016902.1 1554045 1556771 D KEGG: ssn:SSON_2340 NADH dehydrogenase subunit G; TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; NADH-quinone oxidoreductase subunit G 1554045..1556771 Escherichia coli KO11FL 11776389 YP_005277178.1 CDS EKO11_1485 NC_016902.1 1556768 1557745 D PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: sdy:SDY_2478 NADH dehydrogenase subunit H; respiratory-chain NADH dehydrogenase subunit 1 1556768..1557745 Escherichia coli KO11FL 11779437 YP_005277179.1 CDS EKO11_1486 NC_016902.1 1557760 1558302 D TIGRFAM: NADH-quinone oxidoreductase, chain I; KEGG: sbc:SbBS512_E2657 NADH dehydrogenase subunit I; NADH-quinone oxidoreductase subunit I 1557760..1558302 Escherichia coli KO11FL 11776390 YP_005277180.1 CDS EKO11_1487 NC_016902.1 1558314 1558868 D PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: sdy:SDY_2476 NADH dehydrogenase subunit J; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 1558314..1558868 Escherichia coli KO11FL 11776391 YP_005277181.1 CDS EKO11_1488 NC_016902.1 1558865 1559167 D PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: cro:ROD_26811 NADH-quinone oxidoreductase chain K; NADH-ubiquinone oxidoreductase chain 4L 1558865..1559167 Escherichia coli KO11FL 11776392 YP_005277182.1 CDS EKO11_1489 NC_016902.1 1559164 1561005 D KEGG: eok:G2583_2815 NADH-quinone oxidoreductase, L subunit; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; proton-translocating NADH-quinone oxidoreductase subunit L 1559164..1561005 Escherichia coli KO11FL 11776393 YP_005277183.1 CDS EKO11_1490 NC_016902.1 1561169 1562698 D KEGG: ebd:ECBD_1384 NADH dehydrogenase subunit M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase subunit M 1561169..1562698 Escherichia coli KO11FL 11779438 YP_005277184.1 CDS EKO11_1491 NC_016902.1 1562705 1564162 D KEGG: ebd:ECBD_1385 NADH dehydrogenase subunit N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); proton-translocating NADH-quinone oxidoreductase, chain N 1562705..1564162 Escherichia coli KO11FL 11776394 YP_005277185.1 CDS EKO11_1492 NC_016902.1 1564229 1564732 R PFAM: Domain of unknown function DUF1877; KEGG: sdy:SDY_2471 hypothetical protein; hypothetical protein complement(1564229..1564732) Escherichia coli KO11FL 11776395 YP_005277186.1 CDS EKO11_1494 NC_016902.1 1565854 1567071 R PFAM: peptidase C48 SUMO/Sentrin/Ubl1; KEGG: eoj:ECO26_3260 deubiquitinase; peptidase C48 SUMO/Sentrin/Ubl1 complement(1565854..1567071) Escherichia coli KO11FL 11776397 YP_005277187.1 CDS EKO11_1495 NC_016902.1 1567262 1568179 R TIGRFAM: ribonuclease BN; ribonuclease Z; KEGG: sbo:SBO_2305 ribonuclease Z; ribonuclease BN complement(1567262..1568179) Escherichia coli KO11FL 11779439 YP_005277188.1 CDS EKO11_1496 NC_016902.1 1568244 1568705 D PFAM: GCN5-related N-acetyltransferase; KEGG: sbo:SBO_2304 hypothetical protein; N-acetyltransferase GCN5 1568244..1568705 Escherichia coli KO11FL 11776398 YP_005277189.1 CDS EKO11_1497 NC_016902.1 1568760 1569065 D PFAM: protein of unknown function DUF883 ElaB; KEGG: sdy:SDY_2462 hypothetical protein; hypothetical protein 1568760..1569065 Escherichia coli KO11FL 11776399 YP_005277190.1 CDS EKO11_1498 NC_016902.1 1569144 1570439 D KEGG: eoi:ECO111_3016 isochorismate synthase 2; TIGRFAM: isochorismate synthase; PFAM: Chorismate binding-like; isochorismate synthase 1569144..1570439 Escherichia coli KO11FL 11776400 YP_005277191.1 CDS EKO11_1499 NC_016902.1 1570528 1572198 D TIGRFAM: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase; KEGG: ebd:ECBD_1394 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylate synthase; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 1570528..1572198 Escherichia coli KO11FL 11776401 YP_005277192.1 CDS EKO11_1500 NC_016902.1 1572195 1572953 D KEGG: eoi:ECO111_3014 acyl-CoA thioester hydrolase YfbB; PFAM: alpha/beta hydrolase fold; 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 1572195..1572953 Escherichia coli KO11FL 11776402 YP_005277193.1 CDS EKO11_1501 NC_016902.1 1572968 1573825 D KEGG: efe:EFER_0906 naphthoate synthase; TIGRFAM: naphthoate synthase; PFAM: Enoyl-CoA hydratase/isomerase; naphthoate synthase 1572968..1573825 Escherichia coli KO11FL 11779440 YP_005277194.1 CDS EKO11_1502 NC_016902.1 1573825 1574787 D TIGRFAM: o-succinylbenzoic acid (OSB) synthetase; KEGG: eoh:ECO103_2728 O-succinylbenzoate synthase; PFAM: Mandelate racemase/muconate lactonizing protein; o-succinylbenzoic acid (OSB) synthetase 1573825..1574787 Escherichia coli KO11FL 11776403 YP_005277195.1 CDS EKO11_1503 NC_016902.1 1574784 1576139 D KEGG: eoi:ECO111_3011 O-succinylbenzoic acid--CoA ligase; TIGRFAM: O-succinylbenzoate-CoA ligase; PFAM: AMP-dependent synthetase and ligase; o-succinylbenzoate--CoA ligase 1574784..1576139 Escherichia coli KO11FL 11776404 YP_005277196.1 CDS EKO11_1504 NC_016902.1 1576249 1576515 D KEGG: sbo:SBO_2296 polymyxin resistance protein B; polymyxin resistance protein B 1576249..1576515 Escherichia coli KO11FL 11776405 YP_005277197.1 CDS EKO11_1505 NC_016902.1 1576509 1576895 R KEGG: sbo:SBO_2295 hypothetical protein; hypothetical protein complement(1576509..1576895) Escherichia coli KO11FL 11779441 YP_005277198.1 CDS EKO11_1506 NC_016902.1 1576895 1577230 R PFAM: protein of unknown function DUF6 transmembrane; KEGG: sbc:SbBS512_E2634 multidrug resistance protein, SMR family; hypothetical protein complement(1576895..1577230) Escherichia coli KO11FL 11776406 YP_005277199.1 CDS EKO11_1507 NC_016902.1 1577227 1578879 R PFAM: glycosyl transferase family 39; KEGG: eoi:ECO111_3007 4-amino-4-deoxy-L-arabinose transferase; glycosyl transferase family protein complement(1577227..1578879) Escherichia coli KO11FL 11776407 YP_005277200.1 CDS EKO11_1508 NC_016902.1 1578879 1579769 R PFAM: polysaccharide deacetylase; KEGG: ssn:SSON_2317 hypothetical protein; polysaccharide deacetylase complement(1578879..1579769) Escherichia coli KO11FL 11776408 YP_005277201.1 CDS EKO11_1509 NC_016902.1 1579766 1581748 R PFAM: NAD-dependent epimerase/dehydratase; formyl transferase domain protein; KEGG: eok:G2583_2795 bifunctional polymyxin resistance protein ArnA; NAD-dependent epimerase/dehydratase complement(1579766..1581748) Escherichia coli KO11FL 11776409 YP_005277202.1 CDS EKO11_1510 NC_016902.1 1581748 1582716 R PFAM: glycosyl transferase family 2; KEGG: sbo:SBO_2291 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; family 2 glycosyl transferase complement(1581748..1582716) Escherichia coli KO11FL 11779442 YP_005277203.1 CDS EKO11_1511 NC_016902.1 1582720 1583877 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: ebr:ECB_02179 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; DegT/DnrJ/EryC1/StrS aminotransferase complement(1582720..1583877) Escherichia coli KO11FL 11776410 YP_005277204.1 CDS EKO11_1512 NC_016902.1 1584110 1584769 D KEGG: sfv:SFV_2322 protein induced by aluminum; manually curated; PFAM: Phosphoglycerate mutase; phosphoglycerate mutase 1584110..1584769 Escherichia coli KO11FL 11776411 YP_005277205.1 CDS EKO11_1513 NC_016902.1 1584808 1585233 R PFAM: NUDIX hydrolase; KEGG: ssn:SSON_2312 hypothetical protein; NUDIX hydrolase complement(1584808..1585233) Escherichia coli KO11FL 11776412 YP_005277206.1 CDS EKO11_1514 NC_016902.1 1585512 1586054 D PFAM: YfaZ family protein; KEGG: eoi:ECO111_2999 putative outer membrane porin protein; hypothetical protein 1585512..1586054 Escherichia coli KO11FL 11776413 YP_005277207.1 CDS EKO11_1515 NC_016902.1 1586154 1587356 D KEGG: eoh:ECO103_2715 competence damage-inducible protein A; TIGRFAM: competence/damage-inducible protein CinA; molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; competence/damage-inducible protein CinA 1586154..1587356 Escherichia coli KO11FL 11776414 YP_005277208.1 CDS EKO11_1517 NC_016902.1 1587922 1588824 R PFAM: transposase YhgA family protein; KEGG: sbc:SbBS512_E2627 hypothetical protein; transposase YhgA family protein complement(1587922..1588824) Escherichia coli KO11FL 11776416 YP_005277209.1 CDS EKO11_1518 NC_016902.1 1589018 1590208 R KEGG: eoh:ECO103_2712 sn-glycerol-3-phosphate dehydrogenase subunit C; TIGRFAM: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; glycerol-3-phosphate dehydrogenase complement(1589018..1590208) Escherichia coli KO11FL 11776417 YP_005277210.1 CDS EKO11_1519 NC_016902.1 1590205 1591464 R TIGRFAM: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit; KEGG: ssn:SSON_2303 anaerobic glycerol-3-phosphate dehydrogenase subunit B; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; glycerol-3-phosphate dehydrogenase complement(1590205..1591464) Escherichia coli KO11FL 11776418 YP_005277211.1 CDS EKO11_1520 NC_016902.1 1591454 1593082 R KEGG: sbc:SbBS512_E2623 sn-glycerol-3-phosphate dehydrogenase subunit A; TIGRFAM: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit; PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; glycerol-3-phosphate dehydrogenase complement(1591454..1593082) Escherichia coli KO11FL 11776419 YP_005277212.1 CDS EKO11_1521 NC_016902.1 1593355 1594713 D KEGG: sfx:S2455 sn-glycerol-3-phosphate transporter; TIGRFAM: glycerol-3-phosphate transporter; phosphoglycerate transporter; PFAM: major facilitator superfamily MFS_1; glycerol-3-phosphate transporter 1593355..1594713 Escherichia coli KO11FL 11776420 YP_005277213.1 CDS EKO11_1522 NC_016902.1 1594718 1595794 D PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: eok:G2583_2779 glycerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 1594718..1595794 Escherichia coli KO11FL 11776421 YP_005277214.1 CDS EKO11_1524 NC_016902.1 1596256 1596906 D KEGG: sfv:SFV_2310 hypothetical protein; hypothetical protein 1596256..1596906 Escherichia coli KO11FL 11776423 YP_005277215.1 CDS EKO11_1525 NC_016902.1 1596960 1597214 R PFAM: ferredoxin; KEGG: sbc:SbBS512_E2616 2Fe-2S ferredoxin YfaE; ferredoxin complement(1596960..1597214) Escherichia coli KO11FL 11776424 YP_005277216.1 CDS EKO11_1526 NC_016902.1 1597214 1598344 R KEGG: ssn:SSON_2294 ribonucleotide-diphosphate reductase subunit beta; PFAM: ribonucleotide reductase; ribonucleoside-diphosphate reductase complement(1597214..1598344) Escherichia coli KO11FL 11776425 YP_005277217.1 CDS EKO11_1527 NC_016902.1 1598491 1600776 R KEGG: eoh:ECO103_2703 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit domain protein; ATP-cone domain protein; ribonucleoside-diphosphate reductase subunit alpha complement(1598491..1600776) Escherichia coli KO11FL 11776426 YP_005277218.1 CDS EKO11_1528 NC_016902.1 1601466 1605206 D KEGG: eoh:ECO103_2702 adhesin; TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; polymorphic outer membrane protein; PFAM: Autotransporter beta- domain protein; Pertactin; Polymorphic membrane protein Chlamydia; outer membrane autotransporter barrel domain-containing protein 1601466..1605206 Escherichia coli KO11FL 11776427 YP_005277219.1 CDS EKO11_1530 NC_016902.1 1605334 1606056 R TIGRFAM: ubiquinone biosynthesis O-methyltransferase; KEGG: sbc:SbBS512_E2607 3-demethylubiquinone-9 3-methyltransferase; PFAM: Methyltransferase type 11; ubiquinone biosynthesis O-methyltransferase complement(1605334..1606056) Escherichia coli KO11FL 11776429 YP_005277220.1 CDS EKO11_1531 NC_016902.1 1606203 1608830 D SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA gyrase, A subunit; KEGG: sbc:SbBS512_E2606 DNA gyrase subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; DNA gyrase subunit A 1606203..1608830 Escherichia coli KO11FL 11776430 YP_005277221.1 CDS EKO11_1532 NC_016902.1 1608979 1610667 D PFAM: Protein of unknown function DUF2138; KEGG: ebw:BWG_2002 hypothetical protein; hypothetical protein 1608979..1610667 Escherichia coli KO11FL 11776431 YP_005277222.1 CDS EKO11_1533 NC_016902.1 1610664 1611287 D PFAM: protein of unknown function DUF1175; KEGG: eoh:ECO103_2698 hypothetical protein; hypothetical protein 1610664..1611287 Escherichia coli KO11FL 11776432 YP_005277223.1 CDS EKO11_1534 NC_016902.1 1611221 1615825 D KEGG: eoj:ECO26_3148 alpha-2-macroglobulin family protein; manually curated; PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; alpha-2-macroglobulin domain-containing protein 1611221..1615825 Escherichia coli KO11FL 11776433 YP_005277224.1 CDS EKO11_1535 NC_016902.1 1615826 1617475 D PFAM: Protein of unknown function DUF2300, secreted; KEGG: ssn:SSON_2285 hypothetical protein; hypothetical protein 1615826..1617475 Escherichia coli KO11FL 11776434 YP_005277225.1 CDS EKO11_1536 NC_016902.1 1617480 1618256 D PFAM: Protein of unknown function DUF2135; KEGG: eoh:ECO103_2695 hypothetical protein; hypothetical protein 1617480..1618256 Escherichia coli KO11FL 11776435 YP_005277226.1 CDS EKO11_1537 NC_016902.1 1618531 1621380 D KEGG: ssn:SSON_2277 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; PFAM: Signal transduction histidine kinase RcsC, alpha-beta loop-like; ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; integral membrane sensor hybrid histidine kinase 1618531..1621380 Escherichia coli KO11FL 11779443 YP_005277227.1 CDS EKO11_1538 NC_016902.1 1621580 1622230 R KEGG: cko:CKO_00553 transcriptional regulator RcsB; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver; two component transcriptional regulator, LuxR family complement(1621580..1622230) Escherichia coli KO11FL 11779444 YP_005277228.1 CDS EKO11_1539 NC_016902.1 1622247 1624919 R KEGG: eoj:ECO26_3143 phosphotransfer intermediate protein in two-component regulatory system with RcsBC; PFAM: Hpt domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; Hpt sensor signal transduction histidine kinase complement(1622247..1624919) Escherichia coli KO11FL 11776436 YP_005277229.1 CDS EKO11_1540 NC_016902.1 1625658 1626761 D PFAM: porin Gram-negative type; KEGG: eoh:ECO103_2691 outer membrane porin protein C; porin 1625658..1626761 Escherichia coli KO11FL 11779445 YP_005277230.1 CDS EKO11_1541 NC_016902.1 1626873 1627928 D PFAM: ApbE family lipoprotein; KEGG: sbo:SBO_2093 thiamine biosynthesis lipoprotein ApbE; ApbE family lipoprotein 1626873..1627928 Escherichia coli KO11FL 11776437 YP_005277231.1 CDS EKO11_1542 NC_016902.1 1628002 1629066 D TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; Ada metal-binding domain-containing protein; helix-turn-helix- domain containing protein AraC type; methylguanine DNA methyltransferase ribonuclease domain protein; KEGG: ebw:BWG_1987 fused DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase; SMART: Helix-turn-helix, AraC domain; Ada DNA repair protein/AraC family transcriptional regulator 1628002..1629066 Escherichia coli KO11FL 11776438 YP_005277232.1 CDS EKO11_1543 NC_016902.1 1629066 1629716 D KEGG: eoi:ECO111_2949 oxidative demethylase AlkB; TIGRFAM: alkylated DNA repair protein AlkB; PFAM: 2OG-Fe(II) oxygenase; alkylated DNA repair protein AlkB 1629066..1629716 Escherichia coli KO11FL 11776439 YP_005277233.1 CDS EKO11_1544 NC_016902.1 1629792 1631435 D TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; KEGG: eoh:ECO103_2687 multidrug transporter membrane component/ATP-binding component; SMART: AAA ATPase; cyclic peptide transporter 1629792..1631435 Escherichia coli KO11FL 11776440 YP_005277234.1 CDS EKO11_1545 NC_016902.1 1631653 1633299 D TIGRFAM: malate/quinone oxidoreductase; KEGG: eoj:ECO26_3137 malate:quinone oxidoreductase; PFAM: Malate:quinone-oxidoreductase; malate/quinone oxidoreductase 1631653..1633299 Escherichia coli KO11FL 11776441 YP_005277235.1 CDS EKO11_1546 NC_016902.1 1633448 1633936 R PFAM: proteinase inhibitor I11 ecotin; KEGG: eoi:ECO111_2946 ecotin; proteinase inhibitor I11 ecotin complement(1633448..1633936) Escherichia coli KO11FL 11776442 YP_005277236.1 CDS EKO11_1547 NC_016902.1 1634021 1634236 R KEGG: sbc:SbBS512_E0732 hypothetical protein; hypothetical protein complement(1634021..1634236) Escherichia coli KO11FL 11776443 YP_005277237.1 CDS EKO11_1548 NC_016902.1 1634345 1634839 D TIGRFAM: ferredoxin-type protein NapF; KEGG: efe:EFER_2298 ferredoxin-type protein; ferredoxin-type protein NapF 1634345..1634839 Escherichia coli KO11FL 11776444 YP_005277238.1 CDS EKO11_1549 NC_016902.1 1634829 1635092 D PFAM: NapD family protein; KEGG: sbc:SbBS512_E0734 assembly protein for periplasmic nitrate reductase; NapD family protein 1634829..1635092 Escherichia coli KO11FL 11776445 YP_005277239.1 CDS EKO11_1550 NC_016902.1 1635089 1637575 D KEGG: ssn:SSON_2264 nitrate reductase catalytic subunit; TIGRFAM: periplasmic nitrate reductase, large subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; Twin-arginine translocation pathway, signal sequence, subgroup; molydopterin dinucleotide-binding region; periplasmic nitrate reductase, large subunit 1635089..1637575 Escherichia coli KO11FL 11776446 YP_005277240.1 CDS EKO11_1551 NC_016902.1 1637582 1638277 D TIGRFAM: MauM/NapG family ferredoxin-type protein; KEGG: sdy:SDY_0873 quinol dehydrogenase periplasmic component; MauM/NapG family ferredoxin-type protein 1637582..1638277 Escherichia coli KO11FL 11776447 YP_005277241.1 CDS EKO11_1552 NC_016902.1 1638264 1639127 D TIGRFAM: ferredoxin-type protein, NapH/MauN family; KEGG: eoh:ECO103_2679 quinol dehydrogenase membrane component; ferredoxin-type protein, NapH/MauN family 1638264..1639127 Escherichia coli KO11FL 11776448 YP_005277242.1 CDS EKO11_1553 NC_016902.1 1639124 1639573 D PFAM: Nitrate reductase cytochrome c-type subunit (NapB); KEGG: sbc:SbBS512_E0738 citrate reductase cytochrome c-type subunit; nitrate reductase cytochrome c-type subunit (NapB) 1639124..1639573 Escherichia coli KO11FL 11776449 YP_005277243.1 CDS EKO11_1554 NC_016902.1 1639583 1640185 D KEGG: sbc:SbBS512_E0739 cytochrome c-type protein NapC; TIGRFAM: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family; PFAM: NapC/NirT cytochrome c domain protein; periplasmic nitrate (or nitrite) reductase c-type cytochrome 1639583..1640185 Escherichia coli KO11FL 11776450 YP_005277244.1 CDS EKO11_1555 NC_016902.1 1640204 1640821 D TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; KEGG: sbc:SbBS512_E0740 cytochrome c biogenesis protein CcmA; SMART: AAA ATPase; heme exporter protein CcmA 1640204..1640821 Escherichia coli KO11FL 11776451 YP_005277245.1 CDS EKO11_1556 NC_016902.1 1640818 1641480 D KEGG: sdy:SDY_0878 heme exporter protein B; TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB; heme exporter protein CcmB 1640818..1641480 Escherichia coli KO11FL 11776452 YP_005277246.1 CDS EKO11_1557 NC_016902.1 1641522 1642259 D KEGG: sdy:SDY_0879 heme exporter protein C; TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; heme exporter protein CcmC 1641522..1642259 Escherichia coli KO11FL 11776453 YP_005277247.1 CDS EKO11_1558 NC_016902.1 1642256 1642465 D KEGG: sdy:SDY_0880 heme exporter protein C; TIGRFAM: heme exporter protein CcmD; PFAM: Heme exporter protein D (CcmD); heme exporter protein CcmD 1642256..1642465 Escherichia coli KO11FL 11776454 YP_005277248.1 CDS EKO11_1559 NC_016902.1 1642462 1642941 D PFAM: CcmE/CycJ protein; KEGG: sdy:SDY_0881 cytochrome c-type biogenesis protein CcmE; CcmE/CycJ protein 1642462..1642941 Escherichia coli KO11FL 11776455 YP_005277249.1 CDS EKO11_1560 NC_016902.1 1642938 1644881 D KEGG: ebd:ECBD_1464 cytochrome c assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; cytochrome c-type biogenesis protein CcmF 1642938..1644881 Escherichia coli KO11FL 11779446 YP_005277250.1 CDS EKO11_1561 NC_016902.1 1644878 1645435 D KEGG: sbc:SbBS512_E0746 thiol:disulfide interchange protein DsbE; TIGRFAM: periplasmic protein thiol/disulphide oxidoreductase DsbE; PFAM: Redoxin domain protein; protein thiol/disulfide oxidoreductase DsbE 1644878..1645435 Escherichia coli KO11FL 11776456 YP_005277251.1 CDS EKO11_1562 NC_016902.1 1645432 1646484 D PFAM: cytochrome C biogenesis protein; KEGG: eoh:ECO103_2669 heme lyase, CcmH subunit; cytochrome C biogenesis protein 1645432..1646484 Escherichia coli KO11FL 11776457 YP_005277252.1 CDS EKO11_1563 NC_016902.1 1646519 1647166 R KEGG: sdy:SDY_0885 transcriptional regulator NarP; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; two component transcriptional regulator, LuxR family complement(1646519..1647166) Escherichia coli KO11FL 11776458 YP_005277253.1 CDS EKO11_1565 NC_016902.1 1650332 1652092 R PFAM: sulfatase; KEGG: eoh:ECO103_2665 putative hydrolase, inner membrane; sulfatase complement(1650332..1652092) Escherichia coli KO11FL 11776461 YP_005277254.1 CDS EKO11_1566 NC_016902.1 1652112 1652339 R PFAM: protein of unknown function DUF1414; KEGG: sbc:SbBS512_E0770 hypothetical protein; hypothetical protein complement(1652112..1652339) Escherichia coli KO11FL 11776462 YP_005277255.1 CDS EKO11_1567 NC_016902.1 1652521 1653528 D PFAM: 37kDa nucleoid-associated protein; KEGG: sdy:SDY_0893 nucleoid-associated protein NdpA; 37kDa nucleoid-associated protein 1652521..1653528 Escherichia coli KO11FL 11776463 YP_005277256.1 CDS EKO11_1568 NC_016902.1 1653667 1653951 R PFAM: Ribosomal protein L25-like; KEGG: sdy:SDY_0894 50S ribosomal protein L25; 50S ribosomal protein L25-like protein complement(1653667..1653951) Escherichia coli KO11FL 11776464 YP_005277257.1 CDS EKO11_1569 NC_016902.1 1654076 1655836 R KEGG: sbc:SbBS512_E0774 putative helicase; PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; type III restriction protein res subunit complement(1654076..1655836) Escherichia coli KO11FL 11776465 YP_005277258.1 CDS EKO11_1570 NC_016902.1 1655985 1656680 D KEGG: sbo:SBO_2141 16S rRNA pseudouridylate synthase A; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; pseudouridine synthase 1655985..1656680 Escherichia coli KO11FL 11776466 YP_005277259.1 CDS EKO11_1571 NC_016902.1 1656708 1657898 D KEGG: ebd:ECBD_1475 bicyclomycin/multidrug efflux system; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; multidrug/H+ antiporter, major facilitator superfamily (MFS); PFAM: major facilitator superfamily MFS_1; Bcr/CflA subfamily drug resistance transporter 1656708..1657898 Escherichia coli KO11FL 11776467 YP_005277260.1 CDS EKO11_1572 NC_016902.1 1658231 1658575 D KEGG: sdy:SDY_0898 hypothetical protein; hypothetical protein 1658231..1658575 Escherichia coli KO11FL 11779447 YP_005277261.1 CDS EKO11_1573 NC_016902.1 1658579 1660168 R KEGG: eoh:ECO103_2657 fused putative oligopeptide transporter subunits of ABC superfamilly: ATP-binding components; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; ABC transporter complement(1658579..1660168) Escherichia coli KO11FL 11779448 YP_005277262.1 CDS EKO11_1574 NC_016902.1 1660170 1661195 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbo:SBO_2145 putative transport system permease protein; binding-protein-dependent transport system inner membrane protein complement(1660170..1661195) Escherichia coli KO11FL 11776468 YP_005277263.1 CDS EKO11_1575 NC_016902.1 1661195 1662289 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ssn:SSON_2234 putative transport system permease protein; binding-protein-dependent transport system inner membrane protein complement(1661195..1662289) Escherichia coli KO11FL 11776469 YP_005277264.1 CDS EKO11_1576 NC_016902.1 1662290 1664104 R PFAM: extracellular solute-binding protein family 5; KEGG: ebd:ECBD_1480 extracellular solute-binding protein family 5; family 5 extracellular solute-binding protein complement(1662290..1664104) Escherichia coli KO11FL 11776470 YP_005277265.1 CDS EKO11_1577 NC_016902.1 1664186 1665742 R KEGG: eoh:ECO103_2653 hypothetical protein; PFAM: EAL domain protein; SMART: EAL domain protein; diguanylate phosphodiesterase complement(1664186..1665742) Escherichia coli KO11FL 11776471 YP_005277266.1 CDS EKO11_1578 NC_016902.1 1665923 1666489 R PFAM: NLP/P60 protein; KEGG: sdy:SDY_0904 putative outer membrane lipoprotein; NLP/P60 protein complement(1665923..1666489) Escherichia coli KO11FL 11776472 YP_005277267.1 CDS EKO11_1579 NC_016902.1 1666901 1667614 R KEGG: eoh:ECO103_2651 undecaprenyl pyrophosphate phosphatase; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; phosphoesterase PA-phosphatase-like protein complement(1666901..1667614) Escherichia coli KO11FL 11776473 YP_005277268.1 CDS EKO11_1580 NC_016902.1 1667653 1668639 R PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: sbc:SbBS512_E0785 CobW/P47K family protein; cobalamin synthesis protein P47K complement(1667653..1668639) Escherichia coli KO11FL 11776474 YP_005277269.1 CDS EKO11_1581 NC_016902.1 1668757 1670223 R PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: eoj:ECO26_3085 putative dehydrogenase, NAD-dependent; mannitol dehydrogenase domain-containing protein complement(1668757..1670223) Escherichia coli KO11FL 11776475 YP_005277270.1 CDS EKO11_1582 NC_016902.1 1670446 1671018 R KEGG: sdy:SDY_0908 elongation factor P; TIGRFAM: elongation factor P-like protein YeiP; PFAM: Elongation factor P/YeiP protein; Elongation factor KOW-like domain-containing protein; Elongation factor P; elongation factor P-like protein YeiP complement(1670446..1671018) Escherichia coli KO11FL 11776476 YP_005277271.1 CDS EKO11_1583 NC_016902.1 1671173 1671427 D PFAM: protein of unknown function UPF0153; KEGG: ebd:ECBD_1487 protein of unknown function UPF0153; hypothetical protein 1671173..1671427 Escherichia coli KO11FL 11779449 YP_005277272.1 CDS EKO11_1584 NC_016902.1 1671424 1672605 R KEGG: eoj:ECO26_3082 lactose/glucose efflux system protein SetB; TIGRFAM: sugar efflux transporter; PFAM: major facilitator superfamily MFS_1; sugar efflux transporter complement(1671424..1672605) Escherichia coli KO11FL 11776477 YP_005277273.1 CDS EKO11_1585 NC_016902.1 1672973 1674103 D KEGG: eoi:ECO111_2887 bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphoryl transfer system HPr; HPr family phosphocarrier protein 1672973..1674103 Escherichia coli KO11FL 11776478 YP_005277274.1 CDS EKO11_1586 NC_016902.1 1674103 1675041 D KEGG: sdy:SDY_2316 1-phosphofructokinase; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; 1-phosphofructokinase 1674103..1675041 Escherichia coli KO11FL 11776479 YP_005277275.1 CDS EKO11_1587 NC_016902.1 1675058 1676749 D TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose-specific, IIB subunnit; KEGG: eoi:ECO111_2885 PTS system fructose-specific transporter subunits IIBC; PFAM: phosphotransferase system EIIC; PTS system fructose subfamily transporter subunit IIC 1675058..1676749 Escherichia coli KO11FL 11776480 YP_005277276.1 CDS EKO11_1588 NC_016902.1 1677173 1678114 D PFAM: PfkB domain protein; KEGG: eoh:ECO103_2641 hypothetical protein; PfkB domain-containing protein 1677173..1678114 Escherichia coli KO11FL 11776481 YP_005277277.1 CDS EKO11_1589 NC_016902.1 1678102 1679040 D PFAM: Indigoidine synthase A family protein; KEGG: eoi:ECO111_2883 hypothetical protein; Indigoidine synthase A family protein 1678102..1679040 Escherichia coli KO11FL 11776482 YP_005277278.1 CDS EKO11_1590 NC_016902.1 1679134 1680384 D KEGG: sbc:SbBS512_E0801 nucleoside transporter, NupC family; TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter domain protein; Na+ dependent nucleoside transporter; nucleoside recognition domain protein; nucleoside transporter 1679134..1680384 Escherichia coli KO11FL 11776483 YP_005277279.1 CDS EKO11_1591 NC_016902.1 1680452 1681150 R KEGG: eok:G2583_2706 DNA-binding transcriptional activator of stationary phase nitrogen survival; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding; CarD family transcriptional regulator complement(1680452..1681150) Escherichia coli KO11FL 11776484 YP_005277280.1 CDS EKO11_1592 NC_016902.1 1681280 1682221 D KEGG: eoi:ECO111_2880 ribonucleoside hydrolase 2; PFAM: Inosine/uridine-preferring nucleoside hydrolase; ribosylpyrimidine nucleosidase 1681280..1682221 Escherichia coli KO11FL 11776485 YP_005277281.1 CDS EKO11_1593 NC_016902.1 1682321 1683571 D KEGG: sdy:SDY_2105 putative transport system permease protein; TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter domain protein; Na+ dependent nucleoside transporter; nucleoside recognition domain protein; nucleoside transporter 1682321..1683571 Escherichia coli KO11FL 11776486 YP_005277282.1 CDS EKO11_1594 NC_016902.1 1683627 1684715 R PFAM: PfkB domain protein; KEGG: eok:G2583_2703 kinase, PfkB family; PfkB domain-containing protein complement(1683627..1684715) Escherichia coli KO11FL 11776487 YP_005277283.1 CDS EKO11_1595 NC_016902.1 1684718 1685575 R SMART: AP endonuclease family 2; TIGRFAM: apurinic endonuclease Apn1; KEGG: sbo:SBO_2168 endonuclease IV; PFAM: Xylose isomerase domain-containing protein TIM barrel; apurinic endonuclease Apn1 complement(1684718..1685575) Escherichia coli KO11FL 11776488 YP_005277284.1 CDS EKO11_1596 NC_016902.1 1685649 1686698 R PFAM: Uncharacterised protein family UPF0324; KEGG: sbo:SBO_2169 hypothetical protein; hypothetical protein complement(1685649..1686698) Escherichia coli KO11FL 11779450 YP_005277285.1 CDS EKO11_1597 NC_016902.1 1686797 1687678 D KEGG: ssn:SSON_2213 putative DNA-binding transcriptional regulator; manually curated; PFAM: LysR substrate-binding; regulatory protein LysR; LysR family transcriptional regulator 1686797..1687678 Escherichia coli KO11FL 11776489 YP_005277286.1 CDS EKO11_1598 NC_016902.1 1687883 1689352 D PFAM: amino acid permease-associated region; KEGG: sdy:SDY_2110 lysine transporter; amino acid permease 1687883..1689352 Escherichia coli KO11FL 11776490 YP_005277287.1 CDS EKO11_1599 NC_016902.1 1689645 1691636 D PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: stm:STM2199 ligand-binding site; other site; TonB-dependent receptor plug 1689645..1691636 Escherichia coli KO11FL 11776491 YP_005277288.1 CDS EKO11_1600 NC_016902.1 1691668 1692504 R TIGRFAM: S-formylglutathione hydrolase; KEGG: sbc:SbBS512_E0812 S-formylglutathione hydrolase; PFAM: esterase; S-formylglutathione hydrolase complement(1691668..1692504) Escherichia coli KO11FL 11776492 YP_005277289.1 CDS EKO11_1601 NC_016902.1 1692762 1693430 D TIGRFAM: GTP cyclohydrolase I; KEGG: sdy:SDY_2127 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; GTP cyclohydrolase I 1692762..1693430 Escherichia coli KO11FL 11776493 YP_005277290.1 CDS EKO11_1602 NC_016902.1 1693447 1694604 D PFAM: protein of unknown function DUF418; KEGG: ebd:ECBD_1506 hypothetical protein; hypothetical protein 1693447..1694604 Escherichia coli KO11FL 11776494 YP_005277291.1 CDS EKO11_1603 NC_016902.1 1694746 1695786 D KEGG: eoj:ECO26_3063 DNA-binding transcriptional regulator GalS; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator 1694746..1695786 Escherichia coli KO11FL 11776495 YP_005277292.1 CDS EKO11_1604 NC_016902.1 1696066 1697064 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sdy:SDY_2130 galactose-binding transport protein; periplasmic binding protein/LacI transcriptional regulator 1696066..1697064 Escherichia coli KO11FL 11776496 YP_005277293.1 CDS EKO11_1605 NC_016902.1 1697125 1698645 D KEGG: ssn:SSON_2205 galactose/methyl galaxtoside transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1697125..1698645 Escherichia coli KO11FL 11776497 YP_005277294.1 CDS EKO11_1606 NC_016902.1 1698661 1699671 D PFAM: inner-membrane translocator; KEGG: sbc:SbBS512_E0823 beta-methylgalactoside transporter inner membrane component; inner-membrane translocator 1698661..1699671 Escherichia coli KO11FL 11776498 YP_005277295.1 CDS EKO11_1607 NC_016902.1 1699742 1700977 R TIGRFAM: dihydroorotate dehydrogenase family protein; KEGG: eoi:ECO111_2864 dihydropyrimidine dehydrogenase; PFAM: dihydroorotate oxidase; dihydroorotate dehydrogenase family protein complement(1699742..1700977) Escherichia coli KO11FL 11776499 YP_005277296.1 CDS EKO11_1608 NC_016902.1 1700971 1702209 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: eok:G2583_2689 hypothetical protein; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(1700971..1702209) Escherichia coli KO11FL 11776500 YP_005277297.1 CDS EKO11_1610 NC_016902.1 1702528 1702767 R KEGG: sbc:SbBS512_E0826 hypothetical protein; hypothetical protein complement(1702528..1702767) Escherichia coli KO11FL 11776502 YP_005277298.1 CDS EKO11_1611 NC_016902.1 1702770 1703489 R PFAM: protein of unknown function DUF218; KEGG: sdy:SDY_2143 hypothetical protein; hypothetical protein complement(1702770..1703489) Escherichia coli KO11FL 11776503 YP_005277299.1 CDS EKO11_1612 NC_016902.1 1703639 1704523 R TIGRFAM: cytidine deaminase; KEGG: sbc:SbBS512_E0828 cytidine deaminase; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding domain protein; CMP/dCMP deaminase zinc-binding; cytidine deaminase complement(1703639..1704523) Escherichia coli KO11FL 11779451 YP_005277300.1 CDS EKO11_1613 NC_016902.1 1704653 1705348 R PFAM: LrgB family protein; KEGG: sbc:SbBS512_E0829 hypothetical protein; LrgB family protein complement(1704653..1705348) Escherichia coli KO11FL 11776504 YP_005277301.1 CDS EKO11_1614 NC_016902.1 1705345 1705743 R PFAM: LrgA family protein; KEGG: sbo:SBO_1000 hypothetical protein; LrgA family protein complement(1705345..1705743) Escherichia coli KO11FL 11776505 YP_005277302.1 CDS EKO11_1615 NC_016902.1 1705982 1706932 D PFAM: dihydrouridine synthase DuS; KEGG: eoh:ECO103_2615 tRNA-dihydrouridine synthase C; dihydrouridine synthase DuS 1705982..1706932 Escherichia coli KO11FL 11776506 YP_005277303.1 CDS EKO11_1617 NC_016902.1 1709116 1709877 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: eoh:ECO103_2613 acetoin dehydrogenase; short-chain dehydrogenase/reductase SDR 1709116..1709877 Escherichia coli KO11FL 11776508 YP_005277304.1 CDS EKO11_1618 NC_016902.1 1710007 1710585 R PFAM: SNARE associated Golgi protein; KEGG: sbc:SbBS512_E0835 hypothetical protein; hypothetical protein complement(1710007..1710585) Escherichia coli KO11FL 11776509 YP_005277305.1 CDS EKO11_1619 NC_016902.1 1710755 1711342 D PFAM: protein of unknown function DUF1282; KEGG: sbo:SBO_1009 hypothetical protein; hypothetical protein 1710755..1711342 Escherichia coli KO11FL 11776510 YP_005277306.1 CDS EKO11_1620 NC_016902.1 1711516 1712448 D PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: ssn:SSON_2191 D-alanyl-D-alanine endopeptidase; peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 1711516..1712448 Escherichia coli KO11FL 11776511 YP_005277307.1 CDS EKO11_1621 NC_016902.1 1712486 1714201 R KEGG: sbc:SbBS512_E0839 D-lactate dehydrogenase; PFAM: D-lactate dehydrogenase membrane binding ; FAD linked oxidase domain protein; D-lactate dehydrogenase complement(1712486..1714201) Escherichia coli KO11FL 11776512 YP_005277308.1 CDS EKO11_1622 NC_016902.1 1714397 1716694 D PFAM: glycoside hydrolase family 3 domain protein; KEGG: eoh:ECO103_2608 beta-D-glucoside glucohydrolase, periplasmic; glycoside hydrolase family protein 1714397..1716694 Escherichia coli KO11FL 11776513 YP_005277309.1 CDS EKO11_1623 NC_016902.1 1716905 1717822 D PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: ebd:ECBD_1527 substrate-binding region of ABC-type glycine betaine transport system; glycine betaine ABC transporter substrate-binding protein 1716905..1717822 Escherichia coli KO11FL 11776514 YP_005277310.1 CDS EKO11_1624 NC_016902.1 1717829 1718986 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbo:SBO_1014 putative transport system permease protein; binding-protein-dependent transport system inner membrane protein 1717829..1718986 Escherichia coli KO11FL 11776515 YP_005277311.1 CDS EKO11_1625 NC_016902.1 1718979 1719905 D KEGG: ssn:SSON_2186 putative ATP-binding component of a transport system; PFAM: ABC transporter related; CBS domain containing protein; SMART: AAA ATPase; ABC transporter 1718979..1719905 Escherichia coli KO11FL 11776516 YP_005277312.1 CDS EKO11_1626 NC_016902.1 1719910 1720641 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbc:SbBS512_E0845 ABC transporter, quaternary amine uptake (QAT) family, permease protein; binding-protein-dependent transport system inner membrane protein 1719910..1720641 Escherichia coli KO11FL 11776517 YP_005277313.1 CDS EKO11_1627 NC_016902.1 1720622 1720729 R KEGG: sdy:SDY_2161 hypothetical protein; hypothetical protein complement(1720622..1720729) Escherichia coli KO11FL 11776518 YP_005277314.1 CDS EKO11_1628 NC_016902.1 1720789 1721520 R KEGG: eok:G2583_2664 DNA-binding transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; MerR family transcriptional regulator complement(1720789..1721520) Escherichia coli KO11FL 11776519 YP_005277315.1 CDS EKO11_1629 NC_016902.1 1721742 1723427 D KEGG: sfx:S2325 putative 2-component sensor protein; PFAM: histidine kinase internal region; 5TM Receptors of the LytS-YhcK type transmembrane region; GAF domain protein; ATP-binding region ATPase domain protein; SMART: GAF domain protein; signal transduction histidine kinase LytS 1721742..1723427 Escherichia coli KO11FL 11779452 YP_005277316.1 CDS EKO11_1630 NC_016902.1 1723424 1724143 D KEGG: sbo:SBO_0948 putative two-component response-regulatory protein YehT; PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver; LytTR family two component transcriptional regulator 1723424..1724143 Escherichia coli KO11FL 11776520 YP_005277317.1 CDS EKO11_1631 NC_016902.1 1724190 1724660 D PFAM: protein of unknown function DUF1456; KEGG: ebw:BWG_1907 hypothetical protein; hypothetical protein 1724190..1724660 Escherichia coli KO11FL 11776521 YP_005277318.1 CDS EKO11_1632 NC_016902.1 1724700 1725161 R PFAM: protein of unknown function DUF1307; KEGG: ssn:SSON_2169 hypothetical protein; hypothetical protein complement(1724700..1725161) Escherichia coli KO11FL 11779453 YP_005277319.1 CDS EKO11_1633 NC_016902.1 1725286 1727286 R KEGG: ebd:ECBD_1537 zinc finger SWIM domain protein; zinc finger SWIM domain-containing protein complement(1725286..1727286) Escherichia coli KO11FL 11776522 YP_005277320.1 CDS EKO11_1634 NC_016902.1 1727283 1728419 R KEGG: ebd:ECBD_1538 VWA containing CoxE family protein; PFAM: VWA containing CoxE family protein; SMART: von Willebrand factor type A; VWA containing CoxE family protein complement(1727283..1728419) Escherichia coli KO11FL 11776523 YP_005277321.1 CDS EKO11_1635 NC_016902.1 1728412 1730691 R KEGG: eoi:ECO111_2837 hypothetical protein; hypothetical protein complement(1728412..1730691) Escherichia coli KO11FL 11776524 YP_005277322.1 CDS EKO11_1636 NC_016902.1 1730702 1731790 R KEGG: eoi:ECO111_2836 putative transporter subunit; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATPase complement(1730702..1731790) Escherichia coli KO11FL 11779454 YP_005277323.1 CDS EKO11_1637 NC_016902.1 1732973 1733293 R KEGG: eoh:ECO103_2593 hypothetical protein; hypothetical protein complement(1732973..1733293) Escherichia coli KO11FL 11776525 YP_005277324.1 CDS EKO11_1638 NC_016902.1 1733354 1736986 R KEGG: eoh:ECO103_2592 hypothetical protein; hypothetical protein complement(1733354..1736986) Escherichia coli KO11FL 11776526 YP_005277325.1 CDS EKO11_1639 NC_016902.1 1736996 1740790 R KEGG: eoh:ECO103_2591 hypothetical protein; PFAM: WGR domain-containing protein; SMART: WGR domain-containing protein; WGR domain-containing protein complement(1736996..1740790) Escherichia coli KO11FL 11776527 YP_005277326.1 CDS EKO11_1640 NC_016902.1 1740931 1742964 R KEGG: eoh:ECO103_2590 methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase class I (M); t-RNA-binding domain-containing protein; methionyl-tRNA synthetase complement(1740931..1742964) Escherichia coli KO11FL 11776528 YP_005277327.1 CDS EKO11_1641 NC_016902.1 1743096 1744205 D PFAM: ATPase-like, ParA/MinD; KEGG: sbc:SbBS512_E0855 putative ATPase; ParA/MinD-like ATPase 1743096..1744205 Escherichia coli KO11FL 11776529 YP_005277328.1 CDS EKO11_1642 NC_016902.1 1744468 1744749 D KEGG: eoh:ECO103_2588 hypothetical protein; hypothetical protein 1744468..1744749 Escherichia coli KO11FL 11776530 YP_005277329.1 CDS EKO11_1643 NC_016902.1 1745042 1745584 D PFAM: Fimbrial protein domain-containing protein; KEGG: ssn:SSON_2160 putative fimbrial-like protein; fimbrial protein domain-containing protein 1745042..1745584 Escherichia coli KO11FL 11776531 YP_005277330.1 CDS EKO11_1644 NC_016902.1 1745665 1746339 D PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: eoi:ECO111_2826 putative chaperone; Pili assembly chaperone, N-terminal protein 1745665..1746339 Escherichia coli KO11FL 11776532 YP_005277331.1 CDS EKO11_1645 NC_016902.1 1746355 1748835 D PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: eoi:ECO111_2825 putative outer membrane protein; fimbrial biogenesis outer membrane usher protein 1746355..1748835 Escherichia coli KO11FL 11776533 YP_005277332.1 CDS EKO11_1646 NC_016902.1 1748851 1749885 D KEGG: eok:G2583_2644 putative fimbrial-like adhesin protein; putative fimbrial-like adhesin protein 1748851..1749885 Escherichia coli KO11FL 11776534 YP_005277333.1 CDS EKO11_1647 NC_016902.1 1749967 1750305 R KEGG: sbc:SbBS512_E0850 hypothetical protein; hypothetical protein complement(1749967..1750305) Escherichia coli KO11FL 11776535 YP_005277334.1 CDS EKO11_1648 NC_016902.1 1750524 1751348 R PFAM: high-affinity nickel-transporter; KEGG: eok:G2583_2642 nickel/cobalt efflux system RcnA; high-affinity nickel-transporter complement(1750524..1751348) Escherichia coli KO11FL 11776536 YP_005277335.1 CDS EKO11_1649 NC_016902.1 1751469 1751741 D PFAM: protein of unknown function DUF156; KEGG: sdy:SDY_2279 hypothetical protein; hypothetical protein 1751469..1751741 Escherichia coli KO11FL 11779455 YP_005277336.1 CDS EKO11_1650 NC_016902.1 1751964 1752752 D KEGG: eoh:ECO103_2580 hydroxyethylthiazole kinase; PFAM: hydroxyethylthiazole kinase; hydroxyethylthiazole kinase 1751964..1752752 Escherichia coli KO11FL 11776537 YP_005277337.1 CDS EKO11_1651 NC_016902.1 1752749 1753549 D TIGRFAM: phosphomethylpyrimidine kinase; KEGG: sbc:SbBS512_E1135 phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; phosphomethylpyrimidine kinase 1752749..1753549 Escherichia coli KO11FL 11776538 YP_005277338.1 CDS EKO11_1652 NC_016902.1 1753614 1754432 D PFAM: glycoside hydrolase family 25; KEGG: eoj:ECO26_3011 putative hydrolase; SMART: Glycoside hydrolase, family 25 subgroup; lysozyme 1753614..1754432 Escherichia coli KO11FL 11776539 YP_005277339.1 CDS EKO11_1653 NC_016902.1 1754484 1755230 D KEGG: sdy:SDY_2274 putative transcriptional regulator; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 1754484..1755230 Escherichia coli KO11FL 11776540 YP_005277340.1 CDS EKO11_1654 NC_016902.1 1755204 1756169 R PFAM: PfkB domain protein; KEGG: eoi:ECO111_2816 putative kinase; PfkB domain-containing protein complement(1755204..1756169) Escherichia coli KO11FL 11776541 YP_005277341.1 CDS EKO11_1655 NC_016902.1 1756166 1757170 R PFAM: ADP-ribosylation/Crystallin J1; KEGG: ssn:SSON_2147 hypothetical protein; ADP-ribosylation/Crystallin J1 complement(1756166..1757170) Escherichia coli KO11FL 11779456 YP_005277342.1 CDS EKO11_1656 NC_016902.1 1757167 1758444 R TIGRFAM: nucleoside transporter; KEGG: eoi:ECO111_2814 putative nucleoside transporter; nucleoside transporter complement(1757167..1758444) Escherichia coli KO11FL 11776542 YP_005277343.1 CDS EKO11_1657 NC_016902.1 1758701 1759753 D PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: sdy:SDY_2270 fructose-bisphosphate aldolase; deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase 1758701..1759753 Escherichia coli KO11FL 11776543 YP_005277344.1 CDS EKO11_1658 NC_016902.1 1760063 1760917 D TIGRFAM: class II aldolase, tagatose bisphosphate family; ketose-bisphosphate aldolase; KEGG: sbc:SbBS512_E1142 tagatose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II; tagatose bisphosphate family class II aldolase 1760063..1760917 Escherichia coli KO11FL 11779457 YP_005277345.1 CDS EKO11_1659 NC_016902.1 1760946 1762208 D KEGG: eoh:ECO103_2569 D-tagatose 1,6-bisphosphate aldolase 2 subunit GatZ; TIGRFAM: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit; PFAM: D-tagatose-bisphosphate aldolase class II accessory protein AgaZ; D-tagatose-bisphosphate aldolase non-catalytic subunit 1760946..1762208 Escherichia coli KO11FL 11776544 YP_005277346.1 CDS EKO11_1660 NC_016902.1 1762218 1762670 D PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: eoh:ECO103_2568 PTS system galactitol-specific transporter subunit IIA; putative PTS IIA-like nitrogen-regulatory protein PtsN 1762218..1762670 Escherichia coli KO11FL 11776545 YP_005277347.1 CDS EKO11_1661 NC_016902.1 1762701 1762985 D KEGG: sfv:SFV_2148 PTS system galactitol-specific transporter subunit IIB; PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; Protein-N(pi)-phosphohistidine--sugar phosphotransferase 1762701..1762985 Escherichia coli KO11FL 11776546 YP_005277348.1 CDS EKO11_1662 NC_016902.1 1762989 1764344 D KEGG: eoh:ECO103_2566 galactitol-specific enzyme IIC component of PTS; TIGRFAM: PTS system, galactitol-specific IIC subunit; PFAM: PTS system Galactitol-specific IIC component; PTS system galactitol-specific transporter subunit IIC 1762989..1764344 Escherichia coli KO11FL 11776547 YP_005277349.1 CDS EKO11_1663 NC_016902.1 1764392 1765432 D PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: ebd:ECBD_1566 galactitol-1-phosphate dehydrogenase; alcohol dehydrogenase GroES domain-containing protein 1764392..1765432 Escherichia coli KO11FL 11776548 YP_005277350.1 CDS EKO11_1664 NC_016902.1 1765532 1766311 D KEGG: ssn:SSON_2137 galactitol utilization operon repressor; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator 1765532..1766311 Escherichia coli KO11FL 11776549 YP_005277351.1 CDS EKO11_1665 NC_016902.1 1766393 1767292 R KEGG: eoh:ECO103_2563 lipid kinase; PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; diacylglycerol kinase catalytic subunit complement(1766393..1767292) Escherichia coli KO11FL 11776550 YP_005277352.1 CDS EKO11_1666 NC_016902.1 1767638 1768015 D KEGG: ssn:SSON_2135 hypothetical protein; hypothetical protein 1767638..1768015 Escherichia coli KO11FL 11776551 YP_005277353.1 CDS EKO11_1667 NC_016902.1 1768280 1769293 R PFAM: integrase family protein; KEGG: etw:ECSP_2882 integrase; integrase family protein complement(1768280..1769293) Escherichia coli KO11FL 11776552 YP_005277354.1 CDS EKO11_1668 NC_016902.1 1769409 1769708 R SMART: helix-turn-helix domain protein; KEGG: ebr:ECB_02011 bacteriophage P2 C-like protein; helix-turn-helix domain-containing protein complement(1769409..1769708) Escherichia coli KO11FL 11776553 YP_005277355.1 CDS EKO11_1669 NC_016902.1 1769830 1770105 D PFAM: Regulatory phage protein Cox; KEGG: ebr:ECB_02010 bacteriophage P2 Cox-like protein; Regulatory phage protein Cox 1769830..1770105 Escherichia coli KO11FL 11776554 YP_005277356.1 CDS EKO11_1670 NC_016902.1 1770116 1770286 D KEGG: etw:ECSP_2879 hypothetical protein; hypothetical protein 1770116..1770286 Escherichia coli KO11FL 11776555 YP_005277357.1 CDS EKO11_1671 NC_016902.1 1770283 1770783 D KEGG: etw:ECSP_2878 replication gene B protein; replication protein B 1770283..1770783 Escherichia coli KO11FL 11776556 YP_005277358.1 CDS EKO11_1672 NC_016902.1 1770847 1771071 D KEGG: etw:ECSP_2877 hypothetical protein; hypothetical protein 1770847..1771071 Escherichia coli KO11FL 11776557 YP_005277359.1 CDS EKO11_1673 NC_016902.1 1771071 1771370 D KEGG: ebr:ECB_02007 hypothetical protein; hypothetical protein 1771071..1771370 Escherichia coli KO11FL 11776558 YP_005277360.1 CDS EKO11_1674 NC_016902.1 1771373 1771597 D TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; KEGG: ebr:ECB_02006 hypothetical protein; phage/conjugal plasmid C-4 type zinc finger protein, TraR family 1771373..1771597 Escherichia coli KO11FL 11776559 YP_005277361.1 CDS EKO11_1675 NC_016902.1 1771594 1771869 D KEGG: ebr:ECB_02005 hypothetical protein; hypothetical protein 1771594..1771869 Escherichia coli KO11FL 11776560 YP_005277362.1 CDS EKO11_1676 NC_016902.1 1771859 1774135 D PFAM: replication gene A; KEGG: etw:ECSP_2873 phage replication initiation protein; replication protein A 1771859..1774135 Escherichia coli KO11FL 11776561 YP_005277363.1 CDS EKO11_1677 NC_016902.1 1774438 1774551 R hypothetical protein complement(1774438..1774551) Escherichia coli KO11FL 11779458 YP_005277364.1 CDS EKO11_1678 NC_016902.1 1775300 1776733 D KEGG: ctu:Ctu_32430 hypothetical protein; hypothetical protein 1775300..1776733 Escherichia coli KO11FL 11776562 YP_005277365.1 CDS EKO11_1679 NC_016902.1 1776726 1777298 D KEGG: ctu:Ctu_32420 hypothetical protein; hypothetical protein 1776726..1777298 Escherichia coli KO11FL 11776563 YP_005277366.1 CDS EKO11_1680 NC_016902.1 1777357 1778385 R KEGG: etw:ECSP_2868 phage capsid protein; TIGRFAM: phage portal protein, PBSX family; PFAM: portal protein; phage portal protein, PBSX family complement(1777357..1778385) Escherichia coli KO11FL 11776564 YP_005277367.1 CDS EKO11_1681 NC_016902.1 1778385 1780154 R manually curated; KEGG: etw:ECSP_2867 phage large terminase subunit GpP; phage large terminase subunit GpP complement(1778385..1780154) Escherichia coli KO11FL 11776565 YP_005277368.1 CDS EKO11_1682 NC_016902.1 1780328 1781182 D PFAM: capsid scaffolding; KEGG: etw:ECSP_2866 phage capsid scaffolding protein GpO; capsid scaffolding 1780328..1781182 Escherichia coli KO11FL 11776566 YP_005277369.1 CDS EKO11_1683 NC_016902.1 1781241 1782314 D KEGG: etw:ECSP_2865 phage major capsid protein, P2 family; TIGRFAM: phage major capsid protein, P2 family; PFAM: major capsid protein P2; phage major capsid protein, P2 family 1781241..1782314 Escherichia coli KO11FL 11776567 YP_005277370.1 CDS EKO11_1684 NC_016902.1 1782318 1783061 D PFAM: small terminase subunit; KEGG: etw:ECSP_2864 small terminase subunit; small terminase subunit 1782318..1783061 Escherichia coli KO11FL 11776568 YP_005277371.1 CDS EKO11_1685 NC_016902.1 1783101 1783670 D KEGG: etw:ECSP_2863 capsid completion protein; manually curated; PFAM: head completion protein; head completion protein 1783101..1783670 Escherichia coli KO11FL 11776569 YP_005277372.1 CDS EKO11_1686 NC_016902.1 1783670 1783873 D PFAM: tail X family protein; KEGG: etw:ECSP_2862 P2-like prophage tail protein X; tail X family protein 1783670..1783873 Escherichia coli KO11FL 11776570 YP_005277373.1 CDS EKO11_1687 NC_016902.1 1783877 1784158 D PFAM: holin family 2; KEGG: etw:ECSP_2861 hypothetical protein; holin family 2 1783877..1784158 Escherichia coli KO11FL 11776571 YP_005277374.1 CDS EKO11_1688 NC_016902.1 1784158 1784655 D KEGG: etw:ECSP_2860 phage lysozyme; PFAM: glycoside hydrolase family 24; lysozyme 1784158..1784655 Escherichia coli KO11FL 11776572 YP_005277375.1 CDS EKO11_1689 NC_016902.1 1784670 1785095 D KEGG: etw:ECSP_2859 phage lysis protein LysA; phage lysis protein LysA 1784670..1785095 Escherichia coli KO11FL 11776573 YP_005277376.1 CDS EKO11_1690 NC_016902.1 1785083 1785508 D TIGRFAM: phage lysis regulatory protein, LysB family; KEGG: etw:ECSP_2858 phage lysis timing protein LysB; phage lysis regulatory protein, LysB family 1785083..1785508 Escherichia coli KO11FL 11776574 YP_005277377.1 CDS EKO11_1691 NC_016902.1 1785495 1785653 D KEGG: etw:ECSP_2857 phage lysis protein LysC; phage lysis protein LysC 1785495..1785653 Escherichia coli KO11FL 11776575 YP_005277378.1 CDS EKO11_1692 NC_016902.1 1785616 1786083 D KEGG: etw:ECSP_2856 P2 phage tail completion protein R, GpR; P2 phage tail completion protein R, GpR 1785616..1786083 Escherichia coli KO11FL 11776576 YP_005277379.1 CDS EKO11_1693 NC_016902.1 1786076 1786528 D TIGRFAM: phage virion morphogenesis protein; KEGG: etw:ECSP_2855 phage tail protein; phage virion morphogenesis protein 1786076..1786528 Escherichia coli KO11FL 11776577 YP_005277380.1 CDS EKO11_1694 NC_016902.1 1786595 1787230 D TIGRFAM: phage baseplate assembly protein V; KEGG: ebr:ECB_01998 hypothetical protein; phage baseplate assembly protein V 1786595..1787230 Escherichia coli KO11FL 11776578 YP_005277381.1 CDS EKO11_1695 NC_016902.1 1787227 1787574 D PFAM: GPW/gp25 family protein; KEGG: etw:ECSP_2853 phage baseplate protein; GPW/gp25 family protein 1787227..1787574 Escherichia coli KO11FL 11776579 YP_005277382.1 CDS EKO11_1696 NC_016902.1 1787579 1788487 D PFAM: Baseplate J family protein; KEGG: etw:ECSP_2852 baseplate assembly protein; baseplate J family protein 1787579..1788487 Escherichia coli KO11FL 11776580 YP_005277383.1 CDS EKO11_1697 NC_016902.1 1788480 1789091 D TIGRFAM: phage tail protein I; KEGG: etw:ECSP_2851 phage P2-related tail formation protein; phage tail protein I 1788480..1789091 Escherichia coli KO11FL 11776581 YP_005277384.1 CDS EKO11_1698 NC_016902.1 1789088 1790371 D PFAM: Tail Collar domain protein; KEGG: etw:ECSP_2850 phage tail fiber protein; Tail Collar domain-containing protein 1789088..1790371 Escherichia coli KO11FL 11776582 YP_005277385.1 CDS EKO11_1699 NC_016902.1 1790371 1790964 D PFAM: tail assembly chaperone gp38; KEGG: etw:ECSP_0289 hypothetical protein; tail assembly chaperone gp38 1790371..1790964 Escherichia coli KO11FL 11776583 YP_005277386.1 CDS EKO11_1700 NC_016902.1 1790936 1791424 R PFAM: tail assembly chaperone gp38; KEGG: ebw:BWG_2124 CPS-53 (KpLE1) prophage; hypothetical protein; tail assembly chaperone gp38 complement(1790936..1791424) Escherichia coli KO11FL 11779459 YP_005277387.1 CDS EKO11_1702 NC_016902.1 1791711 1792415 D PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: etw:ECSP_2846 DNA-invertase; Resolvase domain-containing protein 1791711..1792415 Escherichia coli KO11FL 11776585 YP_005277388.1 CDS EKO11_1703 NC_016902.1 1792475 1793665 D KEGG: etw:ECSP_2845 phage tail sheath protein FI; phage tail sheath protein FI 1792475..1793665 Escherichia coli KO11FL 11776586 YP_005277389.1 CDS EKO11_1704 NC_016902.1 1793678 1794196 D KEGG: etw:ECSP_2844 phage tail tube protein FII; TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein; phage major tail tube protein 1793678..1794196 Escherichia coli KO11FL 11776587 YP_005277390.1 CDS EKO11_1706 NC_016902.1 1794673 1797120 D KEGG: etw:ECSP_2842 phage related tail protein; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region; phage tail tape measure protein, TP901 family 1794673..1797120 Escherichia coli KO11FL 11776589 YP_005277391.1 CDS EKO11_1707 NC_016902.1 1797135 1797614 D PFAM: P2 GpU family protein; KEGG: etw:ECSP_2841 phage protein gpU; P2 GpU family protein 1797135..1797614 Escherichia coli KO11FL 11779460 YP_005277392.1 CDS EKO11_1708 NC_016902.1 1797614 1798777 D KEGG: etw:ECSP_2840 phage protein D; phage protein D 1797614..1798777 Escherichia coli KO11FL 11779461 YP_005277393.1 CDS EKO11_1709 NC_016902.1 1798777 1799076 D KEGG: etw:ECSP_2839 DNA-binding transcriptional regulator; manually curated; PFAM: transcriptional activator Ogr/delta; transcriptional activator Ogr/delta 1798777..1799076 Escherichia coli KO11FL 11776590 YP_005277394.1 CDS EKO11_1710 NC_016902.1 1799349 1800710 R PFAM: peptidase U32; KEGG: sbc:SbBS512_E1150 peptidase, U32 family; peptidase U32 complement(1799349..1800710) Escherichia coli KO11FL 11776591 YP_005277395.1 CDS EKO11_1711 NC_016902.1 1800813 1801109 R PFAM: plasmid stabilization system; KEGG: sbc:SbBS512_E1151 RelE/ParE family plasmid stabilization system protein; plasmid stabilization system complement(1800813..1801109) Escherichia coli KO11FL 11776592 YP_005277396.1 CDS EKO11_1712 NC_016902.1 1801111 1801362 R TIGRFAM: addiction module antidote protein, CC2985 family; KEGG: sdy:SDY_2257 hypothetical protein; addiction module antidote protein complement(1801111..1801362) Escherichia coli KO11FL 11776593 YP_005277397.1 CDS EKO11_1713 NC_016902.1 1801616 1801948 R PFAM: protein of unknown function DUF1508; KEGG: sbc:SbBS512_E1153 hypothetical protein; hypothetical protein complement(1801616..1801948) Escherichia coli KO11FL 11776594 YP_005277398.1 CDS EKO11_1714 NC_016902.1 1802139 1802861 R KEGG: sbc:SbBS512_E1154 DNA-binding transcriptional regulator BaeR; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; two component transcriptional regulator, winged helix family complement(1802139..1802861) Escherichia coli KO11FL 11776595 YP_005277399.1 CDS EKO11_1715 NC_016902.1 1802858 1804261 R KEGG: ebd:ECBD_1575 signal transduction histidine-protein kinase BaeS; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; integral membrane sensor signal transduction histidine kinase complement(1802858..1804261) Escherichia coli KO11FL 11776596 YP_005277400.1 CDS EKO11_1716 NC_016902.1 1804258 1805673 R PFAM: major facilitator superfamily MFS_1; KEGG: eoh:ECO103_2555 multidrug efflux system protein MdtE; major facilitator superfamily protein complement(1804258..1805673) Escherichia coli KO11FL 11776597 YP_005277401.1 CDS EKO11_1717 NC_016902.1 1805674 1808751 R PFAM: acriflavin resistance protein; KEGG: efe:EFER_2163 multidrug efflux system subunit MdtC; acriflavin resistance protein complement(1805674..1808751) Escherichia coli KO11FL 11776598 YP_005277402.1 CDS EKO11_1718 NC_016902.1 1808752 1811874 R PFAM: acriflavin resistance protein; KEGG: ebw:BWG_1865 multidrug efflux system subunit MdtB; acriflavin resistance protein complement(1808752..1811874) Escherichia coli KO11FL 11776599 YP_005277403.1 CDS EKO11_1719 NC_016902.1 1811874 1813121 R KEGG: sbc:SbBS512_E1159 multidrug efflux system subunit MdtA; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(1811874..1813121) Escherichia coli KO11FL 11776600 YP_005277404.1 CDS EKO11_1720 NC_016902.1 1814337 1814996 D KEGG: sbc:SbBS512_E1160 von Willebrand factor type A domain protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; von Willebrand factor type A 1814337..1814996 Escherichia coli KO11FL 11776601 YP_005277405.1 CDS EKO11_1721 NC_016902.1 1814993 1815754 D manually curated; KEGG: sfx:S2261 hypothetical protein; hypothetical protein 1814993..1815754 Escherichia coli KO11FL 11776602 YP_005277406.1 CDS EKO11_1722 NC_016902.1 1815819 1816280 R KEGG: ebw:BWG_1861 hypothetical protein; hypothetical protein complement(1815819..1816280) Escherichia coli KO11FL 11776603 YP_005277407.1 CDS EKO11_1723 NC_016902.1 1816517 1818424 D KEGG: ebw:BWG_1860 hypothetical protein; hypothetical protein 1816517..1818424 Escherichia coli KO11FL 11776604 YP_005277408.1 CDS EKO11_1724 NC_016902.1 1818436 1819788 R KEGG: eoh:ECO103_2548 putative chaperone; putative chaperone complement(1818436..1819788) Escherichia coli KO11FL 11776605 YP_005277409.1 CDS EKO11_1725 NC_016902.1 1819922 1820779 D KEGG: eoj:ECO26_2980 3-methyl-adenine DNA glycosylase II; PFAM: AlkA domain protein; HhH-GPD family protein; SMART: HhH-GPD family protein; AlkA domain-containing protein 1819922..1820779 Escherichia coli KO11FL 11776606 YP_005277410.1 CDS EKO11_1726 NC_016902.1 1820818 1824135 R TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; MASE1 domain protein; PAS fold domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; EAL domain protein; KEGG: eoh:ECO103_2546 putative sensor protein; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; EAL domain protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase complement(1820818..1824135) Escherichia coli KO11FL 11776607 YP_005277411.1 CDS EKO11_1727 NC_016902.1 1824453 1825094 D TIGRFAM: uridine kinase; KEGG: sdy:SDY_2196 uridine kinase; uridine kinase 1824453..1825094 Escherichia coli KO11FL 11779462 YP_005277412.1 CDS EKO11_1728 NC_016902.1 1825186 1825767 D KEGG: sbc:SbBS512_E1167 deoxycytidine triphosphate deaminase; TIGRFAM: deoxycytidine triphosphate deaminase; PFAM: deoxyUTP pyrophosphatase; deoxycytidine triphosphate deaminase 1825186..1825767 Escherichia coli KO11FL 11779463 YP_005277413.1 CDS EKO11_1729 NC_016902.1 1825789 1827642 D PFAM: AsmA family protein; KEGG: eoj:ECO26_2975 putative assembly protein; AsmA family protein 1825789..1827642 Escherichia coli KO11FL 11776608 YP_005277414.1 CDS EKO11_1730 NC_016902.1 1827695 1827985 R KEGG: sdy:SDY_2199 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; transcriptional regulator, XRE family complement(1827695..1827985) Escherichia coli KO11FL 11776609 YP_005277415.1 CDS EKO11_1731 NC_016902.1 1827975 1828313 R PFAM: protein of unknown function DUF891; KEGG: eok:G2583_2587 hypothetical protein; hypothetical protein complement(1827975..1828313) Escherichia coli KO11FL 11776610 YP_005277416.1 CDS EKO11_1732 NC_016902.1 1828388 1829971 R PFAM: Integral membrane protein TerC; CBS domain containing protein; transporter-associated region; KEGG: sfv:SFV_2122 putative transport protein; integral membrane protein TerC complement(1828388..1829971) Escherichia coli KO11FL 11776611 YP_005277417.1 CDS EKO11_1733 NC_016902.1 1830630 1831769 D PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: sbc:SbBS512_E1170 polysaccharide biosynthesis/export protein; polysaccharide export protein 1830630..1831769 Escherichia coli KO11FL 11779464 YP_005277418.1 CDS EKO11_1734 NC_016902.1 1831775 1832218 D KEGG: sbc:SbBS512_E1171 tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; protein tyrosine phosphatase 1831775..1832218 Escherichia coli KO11FL 11776612 YP_005277419.1 CDS EKO11_1735 NC_016902.1 1832221 1834383 D TIGRFAM: capsular exopolysaccharide family; KEGG: eoh:ECO103_2539 tyrosine kinase; PFAM: lipopolysaccharide biosynthesis protein; capsular exopolysaccharide family protein 1832221..1834383 Escherichia coli KO11FL 11776613 YP_005277420.1 CDS EKO11_1736 NC_016902.1 1834561 1835400 D PFAM: glycosyl transferase family 2; KEGG: sbo:SBO_0886 putative glycosyl transferase; family 2 glycosyl transferase 1834561..1835400 Escherichia coli KO11FL 11776614 YP_005277421.1 CDS EKO11_1737 NC_016902.1 1835403 1835891 D KEGG: ssn:SSON_2111 putative colanic acid biosynthesis acetyltransferase WcaB; putative colanic acid biosynthesis acetyltransferase WcaB 1835403..1835891 Escherichia coli KO11FL 11776615 YP_005277422.1 CDS EKO11_1738 NC_016902.1 1835888 1837105 D PFAM: glycosyl transferase group 1; KEGG: sfv:SFV_2116 putative glycosyl transferase; group 1 glycosyl transferase 1835888..1837105 Escherichia coli KO11FL 11776616 YP_005277423.1 CDS EKO11_1739 NC_016902.1 1837080 1838297 D KEGG: sbc:SbBS512_E1176 putative colanic acid biosynthesis protein; putative colanic acid biosynthesis protein 1837080..1838297 Escherichia coli KO11FL 11776617 YP_005277424.1 CDS EKO11_1740 NC_016902.1 1838308 1839054 D PFAM: glycosyl transferase family 2; KEGG: ebd:ECBD_1600 putative glycosyl transferase; family 2 glycosyl transferase 1838308..1839054 Escherichia coli KO11FL 11776618 YP_005277425.1 CDS EKO11_1741 NC_016902.1 1839070 1839618 D PFAM: transferase hexapeptide repeat containing protein; KEGG: eok:G2583_2577 putative acyl transferase WcaF; transferase hexapeptide repeat containing protein 1839070..1839618 Escherichia coli KO11FL 11776619 YP_005277426.1 CDS EKO11_1742 NC_016902.1 1839644 1840765 D KEGG: sbc:SbBS512_E1179 GDP-mannose 4,6-dehydratase; TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; GDP-mannose 4,6-dehydratase 1839644..1840765 Escherichia coli KO11FL 11776620 YP_005277427.1 CDS EKO11_1743 NC_016902.1 1840768 1841733 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: ssn:SSON_2105 putative nucleotide di-P-sugar epimerase or dehydratase; NAD-dependent epimerase/dehydratase 1840768..1841733 Escherichia coli KO11FL 11776621 YP_005277428.1 CDS EKO11_1744 NC_016902.1 1841733 1842215 D PFAM: NUDIX hydrolase; KEGG: ebd:ECBD_1604 NUDIX hydrolase; NUDIX hydrolase 1841733..1842215 Escherichia coli KO11FL 11776622 YP_005277429.1 CDS EKO11_1745 NC_016902.1 1842212 1843435 D PFAM: glycosyl transferase group 1; KEGG: etw:ECSP_2805 putative glycosyl transferase; group 1 glycosyl transferase 1842212..1843435 Escherichia coli KO11FL 11776623 YP_005277430.1 CDS EKO11_1746 NC_016902.1 1843438 1844874 D TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: eoj:ECO26_2960 mannose-1-phosphate guanyltransferase CpsB; PFAM: Nucleotidyl transferase; mannose-6-phosphate isomerase type II; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1843438..1844874 Escherichia coli KO11FL 11776624 YP_005277431.1 CDS EKO11_1748 NC_016902.1 1845067 1846437 D PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: efe:EFER_2132 phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II 1845067..1846437 Escherichia coli KO11FL 11779466 YP_005277432.1 CDS EKO11_1749 NC_016902.1 1846492 1847886 D TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: sbo:SBO_0874 putative UDP-glucose lipid carrier transferase; PFAM: sugar transferase; undecaprenyl-phosphate glucose phosphotransferase 1846492..1847886 Escherichia coli KO11FL 11776625 YP_005277433.1 CDS EKO11_1750 NC_016902.1 1847888 1849366 D PFAM: polysaccharide biosynthesis protein; KEGG: eoh:ECO103_2525 colanic acid exporter; polysaccharide biosynthesis protein 1847888..1849366 Escherichia coli KO11FL 11776626 YP_005277434.1 CDS EKO11_1751 NC_016902.1 1849368 1849730 D manually curated; KEGG: sfv:SFV_2308 ribonucleotide-diphosphate reductase subunit beta; hypothetical protein 1849368..1849730 Escherichia coli KO11FL 11776627 YP_005277435.1 CDS EKO11_1752 NC_016902.1 1849738 1851018 D KEGG: sbo:SBO_0872 putative pyruvyl transferase; putative pyruvyl transferase 1849738..1851018 Escherichia coli KO11FL 11776628 YP_005277436.1 CDS EKO11_1753 NC_016902.1 1851015 1852235 D PFAM: glycosyl transferase group 1; KEGG: ebw:BWG_1834 putative glycosyl transferase; group 1 glycosyl transferase 1851015..1852235 Escherichia coli KO11FL 11779467 YP_005277437.1 CDS EKO11_1754 NC_016902.1 1852246 1853640 D KEGG: sbo:SBO_0870 putative colanic acid biosynthesis protein; putative colanic acid biosynthesis protein 1852246..1853640 Escherichia coli KO11FL 11776629 YP_005277438.1 CDS EKO11_1755 NC_016902.1 1853815 1854708 D KEGG: eoh:ECO103_2521 UTP--glucose-1-phosphate uridylyltransferase subunit GalF; TIGRFAM: regulatory protein GalF; PFAM: Nucleotidyl transferase; regulatory protein GalF 1853815..1854708 Escherichia coli KO11FL 11776630 YP_005277439.1 CDS EKO11_1756 NC_016902.1 1855083 1856321 D PFAM: polysaccharide biosynthesis protein; KEGG: bcl:ABC3687 O-antigen transporter; polysaccharide biosynthesis protein 1855083..1856321 Escherichia coli KO11FL 11776631 YP_005277440.1 CDS EKO11_1757 NC_016902.1 1856321 1857664 D KEGG: tal:Thal_0139 hypothetical protein; hypothetical protein 1856321..1857664 Escherichia coli KO11FL 11776632 YP_005277441.1 CDS EKO11_1758 NC_016902.1 1857670 1858530 D PFAM: glycosyl transferase family 2; KEGG: abu:Abu_1811 glycosyltransferase; family 2 glycosyl transferase 1857670..1858530 Escherichia coli KO11FL 11776633 YP_005277442.1 CDS EKO11_1759 NC_016902.1 1858527 1859558 D PFAM: glycosyl transferase group 1; KEGG: ttm:Tthe_2417 glycogen synthase; group 1 glycosyl transferase 1858527..1859558 Escherichia coli KO11FL 11776634 YP_005277443.1 CDS EKO11_1760 NC_016902.1 1859545 1860690 D KEGG: trq:TRQ2_0297 glycosyl transferase group 1; hypothetical protein 1859545..1860690 Escherichia coli KO11FL 11776635 YP_005277444.1 CDS EKO11_1761 NC_016902.1 1860707 1861714 D KEGG: hsm:HSM_1256 UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; UDP-glucose 4-epimerase 1860707..1861714 Escherichia coli KO11FL 11776636 YP_005277445.1 CDS EKO11_1762 NC_016902.1 1861735 1862940 D PFAM: glycosyl transferase group 1; KEGG: sec:SC2095 hypothetical protein; group 1 glycosyl transferase 1861735..1862940 Escherichia coli KO11FL 11776637 YP_005277446.1 CDS EKO11_1763 NC_016902.1 1862930 1864369 D TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: enc:ECL_03372 mannose-1-phosphate guanylyltransferase (GDP); PFAM: Nucleotidyl transferase; mannose-6-phosphate isomerase type II; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1862930..1864369 Escherichia coli KO11FL 11776638 YP_005277447.1 CDS EKO11_1764 NC_016902.1 1864452 1865822 D PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: ssn:SSON_2101 phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II 1864452..1865822 Escherichia coli KO11FL 11776639 YP_005277448.1 CDS EKO11_1765 NC_016902.1 1865986 1867392 D KEGG: eoh:ECO103_2508 6-phosphogluconate dehydrogenase; TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase domain-containing protein; 6-phosphogluconate dehydrogenase NAD-binding; 6-phosphogluconate dehydrogenase 1865986..1867392 Escherichia coli KO11FL 11776640 YP_005277449.1 CDS EKO11_1766 NC_016902.1 1867641 1868807 D TIGRFAM: nucleotide sugar dehydrogenase; KEGG: ebd:ECBD_1631 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase ; UDP-glucose/GDP-mannose dehydrogenase dimerisation; nucleotide sugar dehydrogenase 1867641..1868807 Escherichia coli KO11FL 11776641 YP_005277450.1 CDS EKO11_1767 NC_016902.1 1868953 1869930 D PFAM: lipopolysaccharide biosynthesis protein; KEGG: ssn:SSON_2098 regulator of length of O-antigen component of lipopolysaccharide chains; lipopolysaccharide biosynthesis protein 1868953..1869930 Escherichia coli KO11FL 11776642 YP_005277451.1 CDS EKO11_1768 NC_016902.1 1870026 1870634 R KEGG: ssn:SSON_2097 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase-like; phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP diphosphatase complement(1870026..1870634) Escherichia coli KO11FL 11776643 YP_005277452.1 CDS EKO11_1769 NC_016902.1 1870628 1871404 R KEGG: eoh:ECO103_2504 imidazole glycerol phosphate synthase subunit HisF; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; Imidazole glycerol phosphate synthase cyclase subunit complement(1870628..1871404) Escherichia coli KO11FL 11776644 YP_005277453.1 CDS EKO11_1770 NC_016902.1 1871386 1872123 R KEGG: sdy:SDY_2217 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase complement(1871386..1872123) Escherichia coli KO11FL 11776645 YP_005277454.1 CDS EKO11_1771 NC_016902.1 1872123 1872713 R KEGG: sdy:SDY_2218 imidazole glycerol phosphate synthase subunit HisH; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit complement(1872123..1872713) Escherichia coli KO11FL 11776646 YP_005277455.1 CDS EKO11_1772 NC_016902.1 1872713 1873780 R TIGRFAM: histidinol-phosphatase; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: efe:EFER_2105 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; PFAM: imidazoleglycerol-phosphate dehydratase; histidinol-phosphatase complement(1872713..1873780) Escherichia coli KO11FL 11776647 YP_005277456.1 CDS EKO11_1773 NC_016902.1 1873780 1874850 R KEGG: ebw:BWG_1812 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; histidinol-phosphate aminotransferase complement(1873780..1874850) Escherichia coli KO11FL 11776648 YP_005277457.1 CDS EKO11_1774 NC_016902.1 1874847 1876151 R TIGRFAM: histidinol dehydrogenase; KEGG: efe:EFER_2103 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase; histidinol dehydrogenase complement(1874847..1876151) Escherichia coli KO11FL 11776649 YP_005277458.1 CDS EKO11_1775 NC_016902.1 1876157 1877056 R TIGRFAM: ATP phosphoribosyltransferase; KEGG: sbc:SbBS512_E1213 ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region; Histidine biosynthesis protein HisG domain; ATP phosphoribosyltransferase complement(1876157..1877056) Escherichia coli KO11FL 11779468 YP_005277459.1 CDS EKO11_1776 NC_016902.1 1877535 1877786 D TIGRFAM: prevent-host-death family protein; KEGG: sbc:SbBS512_E1214 antitoxin YefM; prevent-host-death family protein 1877535..1877786 Escherichia coli KO11FL 11776650 YP_005277460.1 CDS EKO11_1777 NC_016902.1 1877783 1878037 D KEGG: sbc:SbBS512_E1215 toxin YoeB; TIGRFAM: addiction module toxin, Txe/YoeB family; PFAM: Addiction module toxin Txe/YoeB; Txe/YoeB family addiction module toxin 1877783..1878037 Escherichia coli KO11FL 11776651 YP_005277461.1 CDS EKO11_1778 NC_016902.1 1878120 1878944 D PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: sbo:SBO_0842 putative enzyme of sugar metabolism; 6-phosphogluconate dehydrogenase 1878120..1878944 Escherichia coli KO11FL 11779469 YP_005277462.1 CDS EKO11_1779 NC_016902.1 1878990 1879919 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sbc:SbBS512_E1217 transcriptional regulator, LysR family; LysR family transcriptional regulator 1878990..1879919 Escherichia coli KO11FL 11776652 YP_005277463.1 CDS EKO11_1780 NC_016902.1 1880186 1881544 D PFAM: amino acid permease-associated region; KEGG: sdy:SDY_2226 putative amino acid/amine transport protein; amino acid permease 1880186..1881544 Escherichia coli KO11FL 11776653 YP_005277464.1 CDS EKO11_1781 NC_016902.1 1881723 1882781 D KEGG: eoh:ECO103_2491 putative inner membrane protein; manually curated; PFAM: protein of unknown function DUF395 YeeE/YedE; hypothetical protein 1881723..1882781 Escherichia coli KO11FL 11779470 YP_005277465.1 CDS EKO11_1782 NC_016902.1 1882795 1883022 D PFAM: SirA-like domain-containing protein; KEGG: sbc:SbBS512_E1220 hypothetical protein; SirA-like domain-containing protein 1882795..1883022 Escherichia coli KO11FL 11776654 YP_005277466.1 CDS EKO11_1783 NC_016902.1 1883065 1884492 R PFAM: Exonuclease domain protein; Exonuclease RNase T and DNA polymerase III; KEGG: eoh:ECO103_2489 exonuclease I; SMART: Exonuclease; Exodeoxyribonuclease I complement(1883065..1884492) Escherichia coli KO11FL 11776655 YP_005277467.1 CDS EKO11_1784 NC_016902.1 1884701 1885867 D KEGG: eok:G2583_2530 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; serine-type D-Ala-D-Ala carboxypeptidase 1884701..1885867 Escherichia coli KO11FL 11776656 YP_005277468.1 CDS EKO11_1785 NC_016902.1 1885986 1886459 D PFAM: transcription activator effector binding; KEGG: sbc:SbBS512_E1226 DNA gyrase inhibitor; transcription activator effector binding protein 1885986..1886459 Escherichia coli KO11FL 11776657 YP_005277469.1 CDS EKO11_1786 NC_016902.1 1886657 1887715 D KEGG: eoh:ECO103_2486 hypothetical protein; hypothetical protein 1886657..1887715 Escherichia coli KO11FL 11776658 YP_005277470.1 CDS EKO11_1787 NC_016902.1 1887887 1888216 D PFAM: protein of unknown function DUF496; KEGG: sbc:SbBS512_E1230 hypothetical protein; hypothetical protein 1887887..1888216 Escherichia coli KO11FL 11776659 YP_005277471.1 CDS EKO11_1788 NC_016902.1 1888678 1889220 D KEGG: sdy:SDY_2240 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase; PFAM: cobalbumin biosynthesis protein; adenosylcobinamide-phosphate guanylyltransferase 1888678..1889220 Escherichia coli KO11FL 11776660 YP_005277472.1 CDS EKO11_1789 NC_016902.1 1889217 1889960 D KEGG: sbc:SbBS512_E0966 cobalamin synthase; TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; cobalamin 5'-phosphate synthase 1889217..1889960 Escherichia coli KO11FL 11776661 YP_005277473.1 CDS EKO11_1790 NC_016902.1 1889972 1891051 D TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; KEGG: eoh:ECO103_2452 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1889972..1891051 Escherichia coli KO11FL 11776662 YP_005277474.1 CDS EKO11_1791 NC_016902.1 1891113 1892048 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: eoj:ECO26_2880 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 1891113..1892048 Escherichia coli KO11FL 11776663 YP_005277475.1 CDS EKO11_1792 NC_016902.1 1892506 1893423 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eoh:ECO103_2450 nitrogen assimilation transcriptional regulator; LysR family transcriptional regulator 1892506..1893423 Escherichia coli KO11FL 11776665 YP_005277476.1 CDS EKO11_1793 NC_016902.1 1893525 1894475 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ssn:SSON_2042 transcriptional regulator Cbl; LysR family transcriptional regulator 1893525..1894475 Escherichia coli KO11FL 11779471 YP_005277477.1 CDS EKO11_1794 NC_016902.1 1894749 1896236 D KEGG: eoh:ECO103_2448 hypothetical protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein 1894749..1896236 Escherichia coli KO11FL 11776667 YP_005277478.1 CDS EKO11_1795 NC_016902.1 1896871 1897587 R PFAM: protein of unknown function DUF28; KEGG: sbc:SbBS512_E0985 hypothetical protein; hypothetical protein complement(1896871..1897587) Escherichia coli KO11FL 11779472 YP_005277479.1 CDS EKO11_1796 NC_016902.1 1897930 1899384 R TIGRFAM: AMP nucleosidase; KEGG: ebd:ECBD_1664 AMP nucleosidase; PFAM: AMP nucleoside phosphorylase-like; purine or other phosphorylase family 1; AMP nucleosidase complement(1897930..1899384) Escherichia coli KO11FL 11776669 YP_005277480.1 CDS EKO11_1797 NC_016902.1 1899486 1900802 R KEGG: eoh:ECO103_2445 shikimate transporter; TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: major facilitator superfamily MFS_1; metabolite/H+ symporter, major facilitator superfamily (MFS) complement(1899486..1900802) Escherichia coli KO11FL 11776670 YP_005277481.1 CDS EKO11_1798 NC_016902.1 1901117 1902169 D PFAM: glycosyl transferase family 9; KEGG: eoh:ECO103_2444 putative ADP-heptose:LPS heptosyl transferase; glycosyl transferase family protein 1901117..1902169 Escherichia coli KO11FL 11779473 YP_005277482.1 CDS EKO11_1800 NC_016902.1 1909547 1909696 R KEGG: ebd:ECBD_1668 hypothetical protein; hypothetical protein complement(1909547..1909696) Escherichia coli KO11FL 11776672 YP_005277483.1 CDS EKO11_1801 NC_016902.1 1909996 1910793 R PFAM: protein of unknown function DUF980; KEGG: eoh:ECO103_2437 hypothetical protein; hypothetical protein complement(1909996..1910793) Escherichia coli KO11FL 11776674 YP_005277484.1 CDS EKO11_1802 NC_016902.1 1911546 1912076 R KEGG: sbo:SBO_1032 putative cytochrome; putative cytochrome complement(1911546..1912076) Escherichia coli KO11FL 11776676 YP_005277485.1 CDS EKO11_1803 NC_016902.1 1912419 1913069 R KEGG: ebr:ECB_01888 hypothetical protein; manually curated; PFAM: YodA domain-containing protein; YodA domain-containing protein complement(1912419..1913069) Escherichia coli KO11FL 11776677 YP_005277486.1 CDS EKO11_1804 NC_016902.1 1913326 1913961 R PFAM: Ferric reductase domain protein transmembrane component domain; KEGG: sbc:SbBS512_E0911 putative sulfite oxidase subunit YedZ; ferric reductase domain-containing transmembrane protein complement(1913326..1913961) Escherichia coli KO11FL 11776678 YP_005277487.1 CDS EKO11_1805 NC_016902.1 1913962 1914966 R PFAM: oxidoreductase molybdopterin binding; KEGG: sbc:SbBS512_E0912 putative sulfite oxidase subunit YedY; oxidoreductase molybdopterin binding protein complement(1913962..1914966) Escherichia coli KO11FL 11776679 YP_005277488.1 CDS EKO11_1806 NC_016902.1 1915075 1915488 R SMART: Transthyretin; TIGRFAM: hydroxyisourate hydrolase; KEGG: sfv:SFV_2015 hypothetical protein; PFAM: Transthyretin; hydroxyisourate hydrolase complement(1915075..1915488) Escherichia coli KO11FL 11776680 YP_005277489.1 CDS EKO11_1807 NC_016902.1 1915510 1916292 D TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; KEGG: eok:G2583_2419 heavy metal response regulator; SMART: response regulator receiver; two component heavy metal response transcriptional regulator, winged helix family 1915510..1916292 Escherichia coli KO11FL 11776681 YP_005277490.1 CDS EKO11_1808 NC_016902.1 1916292 1917650 D TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: eoh:ECO103_2216 putative sensory kinase in two-component regulatory system with YedW; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; heavy metal sensor signal transduction histidine kinase 1916292..1917650 Escherichia coli KO11FL 11776682 YP_005277491.1 CDS EKO11_1809 NC_016902.1 1917758 1918609 R PFAM: ThiJ/PfpI domain-containing protein; KEGG: sbc:SbBS512_E0916 chaperone protein HchA; ThiJ/PfpI domain-containing protein complement(1917758..1918609) Escherichia coli KO11FL 11776683 YP_005277492.1 CDS EKO11_1811 NC_016902.1 1919201 1920316 R PFAM: porin Gram-negative type; KEGG: eoh:ECO103_2214 putative outer membrane porin protein; porin complement(1919201..1920316) Escherichia coli KO11FL 11776685 YP_005277493.1 CDS EKO11_1812 NC_016902.1 1920946 1921248 D KEGG: sbo:SBO_1045 hypothetical protein; hypothetical protein 1920946..1921248 Escherichia coli KO11FL 11776686 YP_005277494.1 CDS EKO11_1813 NC_016902.1 1921288 1921983 D KEGG: eoh:ECO103_2212 hypothetical protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; metal dependent phosphohydrolase 1921288..1921983 Escherichia coli KO11FL 11776687 YP_005277495.1 CDS EKO11_1814 NC_016902.1 1922050 1923468 D TIGRFAM: DNA-cytosine methyltransferase; KEGG: ebd:ECBD_1685 DNA cytosine methylase; PFAM: C-5 cytosine-specific DNA methylase; DNA-cytosine methyltransferase 1922050..1923468 Escherichia coli KO11FL 11776688 YP_005277496.1 CDS EKO11_1815 NC_016902.1 1923449 1923919 D KEGG: eoh:ECO103_2210 DNA mismatch endonuclease Vsr of very short patch repair; TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr; DNA mismatch endonuclease Vsr 1923449..1923919 Escherichia coli KO11FL 11776689 YP_005277497.1 CDS EKO11_1816 NC_016902.1 1923908 1924837 R KEGG: ebd:ECBD_1687 hypothetical protein; TIGRFAM: carboxylate/amino acid/amine transporter; PFAM: protein of unknown function DUF6 transmembrane; carboxylate/amino acid/amine transporter complement(1923908..1924837) Escherichia coli KO11FL 11779474 YP_005277498.1 CDS EKO11_1817 NC_016902.1 1925010 1925927 D PFAM: protein of unknown function DUF808; KEGG: sbc:SbBS512_E1080 hypothetical protein; hypothetical protein 1925010..1925927 Escherichia coli KO11FL 11776690 YP_005277499.1 CDS EKO11_1818 NC_016902.1 1926006 1926188 D PFAM: Protein of unknown function DUF2158; KEGG: sdy:SDY_1049 hypothetical protein; hypothetical protein 1926006..1926188 Escherichia coli KO11FL 11776691 YP_005277500.1 CDS EKO11_1819 NC_016902.1 1926359 1928053 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: eoh:ECO103_2206 putative diguanylate cyclase; SMART: GGDEF domain containing protein; diguanylate cyclase 1926359..1928053 Escherichia coli KO11FL 11776692 YP_005277501.1 CDS EKO11_1820 NC_016902.1 1928050 1928865 R TIGRFAM: mannosyl-3-phosphoglycerate phosphatase family protein; mannosyl-3-phosphoglycerate phosphatase family; HAD-superfamily hydrolase, subfamily IIB; KEGG: eoh:ECO103_2205 mannosyl-3-phosphoglycerate phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; mannosyl-3-phosphoglycerate phosphatase family protein complement(1928050..1928865) Escherichia coli KO11FL 11776693 YP_005277502.1 CDS EKO11_1821 NC_016902.1 1929163 1929390 R PFAM: Protein of unknown function DUF2525; KEGG: sdy:SDY_1052 hypothetical protein; hypothetical protein complement(1929163..1929390) Escherichia coli KO11FL 11776694 YP_005277503.1 CDS EKO11_1822 NC_016902.1 1929553 1929741 D PFAM: Dextransucrase DSRB; KEGG: sdy:SDY_1053 hypothetical protein; Dextransucrase DSRB 1929553..1929741 Escherichia coli KO11FL 11776695 YP_005277504.1 CDS EKO11_1823 NC_016902.1 1929785 1930408 R KEGG: sbo:SBO_1056 positive regulator for ctr capsule biosynthesis, positive transcription factor; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; regulatory protein LuxR complement(1929785..1930408) Escherichia coli KO11FL 11776696 YP_005277505.1 CDS EKO11_1824 NC_016902.1 1930698 1931483 R KEGG: eoh:ECO103_2201 flagellar biosynthesis protein FliR; TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; flagellar biosynthetic protein FliR complement(1930698..1931483) Escherichia coli KO11FL 11776697 YP_005277506.1 CDS EKO11_1825 NC_016902.1 1931492 1931761 R KEGG: sbo:SBO_1058 flagellar biosynthesis protein FliQ; TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; flagellar biosynthetic protein FliQ complement(1931492..1931761) Escherichia coli KO11FL 11776698 YP_005277507.1 CDS EKO11_1826 NC_016902.1 1931771 1932508 R KEGG: sbc:SbBS512_E1069 flagellar biosynthesis protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein; flagellar biosynthetic protein FliP complement(1931771..1932508) Escherichia coli KO11FL 11776699 YP_005277508.1 CDS EKO11_1827 NC_016902.1 1932508 1932873 R TIGRFAM: flagellar biosynthetic protein FliO; KEGG: ssn:SSON_2005 flagellar biosynthesis protein FliO; flagellar biosynthetic protein FliO complement(1932508..1932873) Escherichia coli KO11FL 11776700 YP_005277509.1 CDS EKO11_1828 NC_016902.1 1932876 1933289 R KEGG: sbc:SbBS512_E1067 flagellar motor switch protein FliN; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliN complement(1932876..1933289) Escherichia coli KO11FL 11776701 YP_005277510.1 CDS EKO11_1829 NC_016902.1 1933286 1934290 R KEGG: sbo:SBO_1062 flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM complement(1933286..1934290) Escherichia coli KO11FL 11776702 YP_005277511.1 CDS EKO11_1830 NC_016902.1 1934295 1934759 R PFAM: flagellar basal body-associated protein FliL; KEGG: eoi:ECO111_2526 flagellar basal body-associated protein FliL; flagellar basal body-associated protein FliL complement(1934295..1934759) Escherichia coli KO11FL 11776703 YP_005277512.1 CDS EKO11_1831 NC_016902.1 1934864 1935991 R PFAM: Flagellar hook-length control protein-like, C-terminal domain; KEGG: eoi:ECO111_2525 flagellar hook-length control protein; flagellar hook-length control protein-like protein complement(1934864..1935991) Escherichia coli KO11FL 11776704 YP_005277513.1 CDS EKO11_1832 NC_016902.1 1935988 1936431 R KEGG: ssn:SSON_2000 flagellar biosynthesis chaperone; TIGRFAM: flagellar export protein FliJ; PFAM: flagellar export FliJ family protein; flagellar export protein FliJ complement(1935988..1936431) Escherichia coli KO11FL 11776705 YP_005277514.1 CDS EKO11_1833 NC_016902.1 1936450 1937823 R TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; KEGG: ssn:SSON_1999 flagellum-specific ATP synthase; SMART: AAA ATPase; FliI/YscN family ATPase complement(1936450..1937823) Escherichia coli KO11FL 11779475 YP_005277515.1 CDS EKO11_1834 NC_016902.1 1937823 1938509 R PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: eoj:ECO26_2827 flagellar assembly protein H; flagellar assembly protein FliH/type III secretion system HrpE complement(1937823..1938509) Escherichia coli KO11FL 11776706 YP_005277516.1 CDS EKO11_1835 NC_016902.1 1938502 1939497 R KEGG: ebd:ECBD_1706 flagellar motor switch protein G; TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; flagellar motor switch protein FliG complement(1938502..1939497) Escherichia coli KO11FL 11776707 YP_005277517.1 CDS EKO11_1836 NC_016902.1 1939490 1941148 R KEGG: ebd:ECBD_1707 flagellar MS-ring protein; TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein; flagellar M-ring protein FliF complement(1939490..1941148) Escherichia coli KO11FL 11779476 YP_005277518.1 CDS EKO11_1837 NC_016902.1 1941363 1941677 D KEGG: ssn:SSON_1995 flagellar hook-basal body protein FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; flagellar hook-basal body complex subunit FliE 1941363..1941677 Escherichia coli KO11FL 11776708 YP_005277519.1 CDS EKO11_1838 NC_016902.1 1942011 1942343 D PFAM: small multidrug resistance protein; KEGG: ssn:SSON_1994 multidrug efflux protein; small multidrug resistance protein 1942011..1942343 Escherichia coli KO11FL 11776709 YP_005277520.1 CDS EKO11_1839 NC_016902.1 1942512 1943063 D PFAM: PEBP family protein; KEGG: eoi:ECO111_2517 putative kinase inhibitor; PEBP family protein 1942512..1943063 Escherichia coli KO11FL 11776710 YP_005277521.1 CDS EKO11_1840 NC_016902.1 1943073 1943870 D SMART: Helix-turn-helix, AraC domain; KEGG: eoi:ECO111_2516 putative AraC-type regulatory protein; Helix-turn-helix, AraC domain-containing protein 1943073..1943870 Escherichia coli KO11FL 11776711 YP_005277522.1 CDS EKO11_1841 NC_016902.1 1944600 1945259 R KEGG: eoi:ECO111_5009 putative IS609 transposase TnpA; manually curated; PFAM: transposase IS200-family protein; transposase IS200-family protein complement(1944600..1945259) Escherichia coli KO11FL 11776712 YP_005277523.1 CDS EKO11_1842 NC_016902.1 1945342 1946490 D KEGG: eoj:ECO26_5373 putative IS609 transposase TnpB; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS891/IS1136/IS1341 family; Transposase, putative, helix-turn-helix domain; transposase IS605 OrfB; transposase, IS605 OrfB family 1945342..1946490 Escherichia coli KO11FL 11776713 YP_005277524.1 CDS EKO11_1843 NC_016902.1 1946530 1947201 R PFAM: protein of unknown function DUF159; KEGG: eoi:ECO111_2513 hypothetical protein; hypothetical protein complement(1946530..1947201) Escherichia coli KO11FL 11776714 YP_005277525.1 CDS EKO11_1844 NC_016902.1 1947308 1947541 R PFAM: SirA-like domain-containing protein; KEGG: cko:CKO_01008 hypothetical protein; SirA-like domain-containing protein complement(1947308..1947541) Escherichia coli KO11FL 11776715 YP_005277526.1 CDS EKO11_1845 NC_016902.1 1947538 1948743 R PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: sbo:SBO_1077 putative inner membrane protein; hypothetical protein complement(1947538..1948743) Escherichia coli KO11FL 11776716 YP_005277527.1 CDS EKO11_1846 NC_016902.1 1948930 1949343 D KEGG: sdy:SDY_1087 hypothetical protein; hypothetical protein 1948930..1949343 Escherichia coli KO11FL 11776717 YP_005277528.1 CDS EKO11_1847 NC_016902.1 1949377 1950864 R KEGG: eoi:ECO111_2509 cytoplasmic alpha-amylase; PFAM: alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain; alpha amylase complement(1949377..1950864) Escherichia coli KO11FL 11776718 YP_005277529.1 CDS EKO11_1848 NC_016902.1 1950942 1951307 R PFAM: flagellar export chaperone; KEGG: eoi:ECO111_2508 flagellar biosynthesis protein FliT; flagellar export chaperone complement(1950942..1951307) Escherichia coli KO11FL 11776719 YP_005277530.1 CDS EKO11_1849 NC_016902.1 1951307 1951717 R KEGG: sbc:SbBS512_E1055 flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS; flagellar protein FliS complement(1951307..1951717) Escherichia coli KO11FL 11779477 YP_005277531.1 CDS EKO11_1850 NC_016902.1 1951742 1953148 R PFAM: flagellar hook-associated 2 domain-containing protein; flagellar hook-associated protein 2 domain-containing protein; flagellin hook IN repeat protein; KEGG: ebd:ECBD_1718 flagellar capping protein; flagellar hook-associated 2 domain-containing protein complement(1951742..1953148) Escherichia coli KO11FL 11776720 YP_005277532.1 CDS EKO11_1851 NC_016902.1 1953414 1955108 D PFAM: flagellin domain protein; KEGG: sbo:SBO_1083 flagellin; flagellin domain-containing protein 1953414..1955108 Escherichia coli KO11FL 11776721 YP_005277533.1 CDS EKO11_1852 NC_016902.1 1955428 1956147 D KEGG: ssn:SSON_1194 flagellar biosynthesis sigma factor; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; RNA polymerase sigma 28 subunit FliA/WhiG 1955428..1956147 Escherichia coli KO11FL 11779478 YP_005277534.1 CDS EKO11_1853 NC_016902.1 1956193 1956744 D PFAM: integrase domain protein SAM domain protein; KEGG: eoj:ECO26_2813 flagella biosynthesis protein FliZ; integrase domain-containing protein SAM domain-containing protein 1956193..1956744 Escherichia coli KO11FL 11776722 YP_005277535.1 CDS EKO11_1854 NC_016902.1 1956832 1957632 D manually curated; PFAM: extracellular solute-binding protein family 3; KEGG: sbc:SbBS512_E1048 cystine transporter subunit; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; family 3 extracellular solute-binding protein 1956832..1957632 Escherichia coli KO11FL 11776723 YP_005277536.1 CDS EKO11_1855 NC_016902.1 1957737 1958723 D KEGG: ebd:ECBD_1723 D-cysteine desulfhydrase; TIGRFAM: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; D-cysteine desulfhydrase family pyridoxal phosphate-dependent protein 1957737..1958723 Escherichia coli KO11FL 11776724 YP_005277537.1 CDS EKO11_1856 NC_016902.1 1958738 1959406 D KEGG: ssn:SSON_1200 putative transport system permease protein (former YecC); TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 1958738..1959406 Escherichia coli KO11FL 11779479 YP_005277538.1 CDS EKO11_1857 NC_016902.1 1959403 1960155 D KEGG: ssn:SSON_1201 putative amino-acid ABC transporter ATP-binding protein YecC; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1959403..1960155 Escherichia coli KO11FL 11776725 YP_005277539.1 CDS EKO11_1858 NC_016902.1 1960385 1961107 D KEGG: eoh:ECO103_2172 DNA-binding transcriptional activator SdiA; PFAM: Autoinducer-binding domain protein; regulatory protein LuxR; SMART: regulatory protein LuxR; LuxR family transcriptional regulator 1960385..1961107 Escherichia coli KO11FL 11776726 YP_005277540.1 CDS EKO11_1859 NC_016902.1 1961174 1961398 R PFAM: Protein of unknown function DUF2594; KEGG: sdy:SDY_1103 hypothetical protein; hypothetical protein complement(1961174..1961398) Escherichia coli KO11FL 11776727 YP_005277541.1 CDS EKO11_1860 NC_016902.1 1961857 1962513 D KEGG: sbc:SbBS512_E1041 response regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; two component transcriptional regulator, LuxR family 1961857..1962513 Escherichia coli KO11FL 11776728 YP_005277542.1 CDS EKO11_1861 NC_016902.1 1962510 1964342 D TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; UvrB/UvrC protein; helix-hairpin-helix motif; KEGG: ssn:SSON_1205 excinuclease ABC subunit C; SMART: Excinuclease ABC C subunit domain protein; Helix-hairpin-helix DNA-binding class 1; excinuclease ABC subunit C 1962510..1964342 Escherichia coli KO11FL 11776729 YP_005277543.1 CDS EKO11_1862 NC_016902.1 1964399 1964947 D TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; KEGG: sdy:SDY_1106 phosphatidylglycerophosphate synthetase; PFAM: CDP-alcohol phosphatidyltransferase; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase 1964399..1964947 Escherichia coli KO11FL 11776730 YP_005277544.1 CDS EKO11_1863 NC_016902.1 1965596 1966261 D KEGG: sbo:SBO_1098 hypothetical protein; TIGRFAM: yecA family protein; PFAM: SEC-C motif domain protein; yecA family protein 1965596..1966261 Escherichia coli KO11FL 11779480 YP_005277545.1 CDS EKO11_1864 NC_016902.1 1966323 1967534 R KEGG: ebr:ECB_01875 tyrosine transporter; TIGRFAM: aromatic amino acid transporter; PFAM: Tryptophan/tyrosine permease; aromatic amino acid transporter complement(1966323..1967534) Escherichia coli KO11FL 11776734 YP_005277546.1 CDS EKO11_1865 NC_016902.1 1967725 1967964 D KEGG: sbc:SbBS512_E1032 hypothetical protein; TIGRFAM: Protein of unknown function DUF2492; PFAM: Protein of unknown function DUF2492; hypothetical protein 1967725..1967964 Escherichia coli KO11FL 11776735 YP_005277547.1 CDS EKO11_1866 NC_016902.1 1968002 1968499 R KEGG: sdy:SDY_1113 ferritin; PFAM: Ferritin Dps family protein; ferroxidase complement(1968002..1968499) Escherichia coli KO11FL 11779481 YP_005277548.1 CDS EKO11_1867 NC_016902.1 1968670 1968993 R KEGG: ssn:SSON_1214 hypothetical protein; hypothetical protein complement(1968670..1968993) Escherichia coli KO11FL 11776736 YP_005277549.1 CDS EKO11_1868 NC_016902.1 1969457 1969708 D KEGG: sdy:SDY_1117 hypothetical protein; hypothetical protein 1969457..1969708 Escherichia coli KO11FL 11776737 YP_005277550.1 CDS EKO11_1869 NC_016902.1 1969787 1970290 R PFAM: Ferritin Dps family protein; KEGG: sdy:SDY_1116 ferritin-like protein; ferritin Dps family protein complement(1969787..1970290) Escherichia coli KO11FL 11776738 YP_005277551.1 CDS EKO11_1870 NC_016902.1 1971087 1972076 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ebd:ECBD_1740 periplasmic binding protein/LacI transcriptional regulator; periplasmic binding protein/LacI transcriptional regulator 1971087..1972076 Escherichia coli KO11FL 11776739 YP_005277552.1 CDS EKO11_1871 NC_016902.1 1972146 1973660 D KEGG: eoh:ECO103_2159 L-arabinose transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 1972146..1973660 Escherichia coli KO11FL 11779482 YP_005277553.1 CDS EKO11_1872 NC_016902.1 1973675 1974661 D PFAM: inner-membrane translocator; KEGG: sbc:SbBS512_E1023 L-arabinose transporter permease protein; inner-membrane translocator 1973675..1974661 Escherichia coli KO11FL 11776740 YP_005277554.1 CDS EKO11_1873 NC_016902.1 1974828 1975628 D TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; KEGG: ssn:SSON_1220 trehalose-6-phosphate phosphatase; PFAM: trehalose-phosphatase; trehalose-phosphatase 1974828..1975628 Escherichia coli KO11FL 11776741 YP_005277555.1 CDS EKO11_1874 NC_016902.1 1975603 1977027 D TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; KEGG: sdy:SDY_1193 trehalose-6-phosphate synthase; PFAM: glycosyl transferase family 20; alpha,alpha-trehalose-phosphate synthase (UDP-forming) 1975603..1977027 Escherichia coli KO11FL 11779483 YP_005277556.1 CDS EKO11_1875 NC_016902.1 1977034 1977462 R PFAM: UspA domain-containing protein; KEGG: sbo:SBO_1113 universal stress protein UspC; UspA domain-containing protein complement(1977034..1977462) Escherichia coli KO11FL 11776742 YP_005277557.1 CDS EKO11_1876 NC_016902.1 1978242 1978592 D PFAM: flagellar transcriptional activator; KEGG: sdy:SDY_1191 transcriptional activator FlhD; flagellar transcriptional activator 1978242..1978592 Escherichia coli KO11FL 11776743 YP_005277558.1 CDS EKO11_1877 NC_016902.1 1978595 1979173 D PFAM: flagellar transcriptional activator FlhC; KEGG: ssn:SSON_1226 transcriptional activator FlhC; flagellar transcriptional activator FlhC 1978595..1979173 Escherichia coli KO11FL 11776744 YP_005277559.1 CDS EKO11_1878 NC_016902.1 1979300 1980187 D KEGG: eoi:ECO111_2476 flagellar motor protein MotA; flagellar motor protein MotA 1979300..1980187 Escherichia coli KO11FL 11776745 YP_005277560.1 CDS EKO11_1879 NC_016902.1 1980184 1981110 D PFAM: OmpA/MotB domain protein; KEGG: ebd:ECBD_1749 flagellar motor protein MotB; OmpA/MotB domain-containing protein 1980184..1981110 Escherichia coli KO11FL 11776746 YP_005277561.1 CDS EKO11_1880 NC_016902.1 1981115 1983079 D KEGG: eoh:ECO103_2150 chemotaxis protein CheA; PFAM: CheY binding protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; ATP-binding region ATPase domain protein; CheW domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; CheA signal transduction histidine kinase 1981115..1983079 Escherichia coli KO11FL 11776747 YP_005277562.1 CDS EKO11_1881 NC_016902.1 1983100 1983603 D KEGG: ssn:SSON_1230 purine-binding chemotaxis protein; PFAM: CheW domain protein; SMART: CheW domain protein; CheW protein 1983100..1983603 Escherichia coli KO11FL 11776748 YP_005277563.1 CDS EKO11_1882 NC_016902.1 1983748 1985409 D KEGG: ebd:ECBD_1752 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 1983748..1985409 Escherichia coli KO11FL 11776749 YP_005277564.1 CDS EKO11_1883 NC_016902.1 1985455 1987056 D KEGG: sbc:SbBS512_E2178 methyl-accepting protein IV; PFAM: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer 1985455..1987056 Escherichia coli KO11FL 11776750 YP_005277565.1 CDS EKO11_1884 NC_016902.1 1987075 1987935 D PFAM: MCP methyltransferase CheR-type; KEGG: ebw:BWG_1698 chemotaxis methyltransferase CheR; SMART: MCP methyltransferase CheR-type; chemotaxis protein CheR 1987075..1987935 Escherichia coli KO11FL 11776751 YP_005277566.1 CDS EKO11_1885 NC_016902.1 1987938 1988987 D PFAM: CheB methylesterase; response regulator receiver; KEGG: eoh:ECO103_2145 chemotaxis-specific methylesterase; SMART: response regulator receiver; response regulator receiver modulated CheB methylesterase 1987938..1988987 Escherichia coli KO11FL 11776752 YP_005277567.1 CDS EKO11_1886 NC_016902.1 1989002 1989391 D KEGG: ssn:SSON_1235 chemotaxis regulatory protein CheY; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein 1989002..1989391 Escherichia coli KO11FL 11776753 YP_005277568.1 CDS EKO11_1887 NC_016902.1 1989402 1990046 D PFAM: Chemotaxis phosphatase CheZ; KEGG: sbo:SBO_1119 chemotaxis regulator CheZ; chemotaxis phosphatase, CheZ 1989402..1990046 Escherichia coli KO11FL 11776754 YP_005277569.1 CDS EKO11_1888 NC_016902.1 1990248 1991396 D KEGG: eoh:ECO103_2142 flagellar biosynthesis protein FlhB; TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; flagellar biosynthetic protein FlhB 1990248..1991396 Escherichia coli KO11FL 11776755 YP_005277570.1 CDS EKO11_1889 NC_016902.1 1991389 1993467 D KEGG: eoi:ECO111_2465 flagellar biosynthesis protein FlhA; TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; flagellar biosynthesis protein FlhA 1991389..1993467 Escherichia coli KO11FL 11776756 YP_005277571.1 CDS EKO11_1890 NC_016902.1 1993467 1993859 D PFAM: flagellar FlhE family protein; KEGG: sbc:SbBS512_E2171 flagellar protein FlhE; flagellar FlhE family protein 1993467..1993859 Escherichia coli KO11FL 11776757 YP_005277572.1 CDS EKO11_1891 NC_016902.1 1993979 1994467 R KEGG: eoh:ECO103_2139 hypothetical protein; hypothetical protein complement(1993979..1994467) Escherichia coli KO11FL 11779484 YP_005277573.1 CDS EKO11_1892 NC_016902.1 1994644 1996377 R TIGRFAM: arginyl-tRNA synthetase; KEGG: sbc:SbBS512_E2169 arginyl-tRNA synthetase; arginyl-tRNA synthetase complement(1994644..1996377) Escherichia coli KO11FL 11776758 YP_005277574.1 CDS EKO11_1893 NC_016902.1 1996593 1997159 D PFAM: protein of unknown function DUF991; KEGG: ebd:ECBD_1763 hypothetical protein; hypothetical protein 1996593..1997159 Escherichia coli KO11FL 11776759 YP_005277575.1 CDS EKO11_1894 NC_016902.1 1997173 1997919 D PFAM: CutC family protein; KEGG: ssn:SSON_1244 copper homeostasis protein CutC; CutC family protein 1997173..1997919 Escherichia coli KO11FL 11776760 YP_005277576.1 CDS EKO11_1895 NC_016902.1 1998307 1999407 D PFAM: NapC/NirT cytochrome c domain protein; KEGG: eoh:ECO103_2135 TMAO reductase III (TorYZ), cytochrome c-type subunit TorY; NapC/NirT cytochrome c domain protein 1998307..1999407 Escherichia coli KO11FL 11776761 YP_005277577.1 CDS EKO11_1896 NC_016902.1 1999432 2001861 D TIGRFAM: molybdopterin guanine dinucleotide-containing S/N-oxide reductase; KEGG: sbc:SbBS512_E2165 trimethylamine N-oxide reductase III, subunit TorZ; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin guanine dinucleotide-containing S/N-oxide reductase 1999432..2001861 Escherichia coli KO11FL 11776762 YP_005277578.1 CDS EKO11_1897 NC_016902.1 2002026 2002997 R KEGG: ssn:SSON_1249 putative enzyme; TIGRFAM: methyltransferase; PFAM: methyltransferase; methyltransferase complement(2002026..2002997) Escherichia coli KO11FL 11776763 YP_005277579.1 CDS EKO11_1898 NC_016902.1 2002994 2003737 R KEGG: sdy:SDY_1169 hypothetical protein; TIGRFAM: methyltransferase; PFAM: Methyltransferase type 12; methyltransferase complement(2002994..2003737) Escherichia coli KO11FL 11776764 YP_005277580.1 CDS EKO11_1899 NC_016902.1 2003778 2004173 R KEGG: sdy:SDY_1168 hypothetical protein; hypothetical protein complement(2003778..2004173) Escherichia coli KO11FL 11776765 YP_005277581.1 CDS EKO11_1900 NC_016902.1 2004226 2005044 R PFAM: protein of unknown function DUF72; KEGG: ebd:ECBD_1770 hypothetical protein; hypothetical protein complement(2004226..2005044) Escherichia coli KO11FL 11776766 YP_005277582.1 CDS EKO11_1901 NC_016902.1 2005041 2005607 R PFAM: isochorismatase hydrolase; KEGG: ssn:SSON_1274 hypothetical protein; isochorismatase hydrolase complement(2005041..2005607) Escherichia coli KO11FL 11776767 YP_005277583.1 CDS EKO11_1902 NC_016902.1 2005917 2007689 D KEGG: sbc:SbBS512_E1106 aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; GAD domain protein; aspartyl-tRNA synthetase 2005917..2007689 Escherichia coli KO11FL 11776768 YP_005277584.1 CDS EKO11_1903 NC_016902.1 2007750 2008259 D PFAM: NUDIX hydrolase; KEGG: ebd:ECBD_1773 dATP pyrophosphohydrolase; NUDIX hydrolase 2007750..2008259 Escherichia coli KO11FL 11776769 YP_005277585.1 CDS EKO11_1904 NC_016902.1 2008288 2009028 D PFAM: protein of unknown function DUF28; KEGG: efe:EFER_1208 hypothetical protein; hypothetical protein 2008288..2009028 Escherichia coli KO11FL 11776770 YP_005277586.1 CDS EKO11_1905 NC_016902.1 2009063 2009584 D TIGRFAM: crossover junction endodeoxyribonuclease RuvC; KEGG: sdy:SDY_1150 Holliday junction resolvase; PFAM: Crossover junction endodeoxyribonuclease RuvC; crossover junction endodeoxyribonuclease RuvC 2009063..2009584 Escherichia coli KO11FL 11776771 YP_005277587.1 CDS EKO11_1906 NC_016902.1 2009586 2010188 R KEGG: eoi:ECO111_2384 hypothetical protein; hypothetical protein complement(2009586..2010188) Escherichia coli KO11FL 11776772 YP_005277588.1 CDS EKO11_1907 NC_016902.1 2010463 2011074 D KEGG: eoi:ECO111_2383 Holliday junction DNA helicase RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein; Holliday junction DNA helicase RuvA 2010463..2011074 Escherichia coli KO11FL 11776773 YP_005277589.1 CDS EKO11_1908 NC_016902.1 2011083 2012093 D TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; KEGG: sdy:SDY_1147 Holliday junction DNA helicase RuvB; SMART: AAA ATPase; Holliday junction DNA helicase RuvB 2011083..2012093 Escherichia coli KO11FL 11779485 YP_005277590.1 CDS EKO11_1909 NC_016902.1 2012361 2013341 D KEGG: eoh:ECO103_4940 putative IS621 transposase; PFAM: transposase IS116/IS110/IS902 family protein; SMART: Helix-hairpin-helix DNA-binding class 1; transposase IS116/IS110/IS902 family protein 2012361..2013341 Escherichia coli KO11FL 11776774 YP_005277591.1 CDS EKO11_1910 NC_016902.1 2013520 2014305 R PFAM: ABC-3 protein; KEGG: eoh:ECO103_2049 high-affinity zinc transporter membrane component; ABC-3 protein complement(2013520..2014305) Escherichia coli KO11FL 11776775 YP_005277592.1 CDS EKO11_1911 NC_016902.1 2014302 2015057 R KEGG: sbo:SBO_1175 high-affinity zinc transporter ATPase; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(2014302..2015057) Escherichia coli KO11FL 11779486 YP_005277593.1 CDS EKO11_1912 NC_016902.1 2015136 2016068 D PFAM: periplasmic solute binding protein; KEGG: sfx:S1933 high-affinity zinc transporter periplasmic component; periplasmic solute binding protein 2015136..2016068 Escherichia coli KO11FL 11776776 YP_005277594.1 CDS EKO11_1913 NC_016902.1 2016084 2017406 D KEGG: sbc:SbBS512_E0952 hypothetical protein; PFAM: Peptidase M23; Opacity-associated protein A domain protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; peptidase M23 2016084..2017406 Escherichia coli KO11FL 11776777 YP_005277595.1 CDS EKO11_1914 NC_016902.1 2017526 2018497 D KEGG: ssn:SSON_1286 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; TIGRFAM: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; PFAM: lipid A biosynthesis acyltransferase; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 2017526..2018497 Escherichia coli KO11FL 11779487 YP_005277596.1 CDS EKO11_1915 NC_016902.1 2018629 2020071 R TIGRFAM: pyruvate kinase; KEGG: sbc:SbBS512_E2130 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; pyruvate kinase complement(2018629..2020071) Escherichia coli KO11FL 11776778 YP_005277597.1 CDS EKO11_1916 NC_016902.1 2020199 2021068 R PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: sbo:SBO_1161 DNA-binding transcriptional regulator HexR; RpiR family transcriptional regulator complement(2020199..2021068) Escherichia coli KO11FL 11776779 YP_005277598.1 CDS EKO11_1917 NC_016902.1 2021091 2021240 D KEGG: ebd:ECBD_1786 hypothetical protein; hypothetical protein 2021091..2021240 Escherichia coli KO11FL 11776780 YP_005277599.1 CDS EKO11_1918 NC_016902.1 2021406 2022881 D TIGRFAM: glucose-6-phosphate 1-dehydrogenase; KEGG: sdy:SDY_1138 glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase; glucose-6-phosphate 1-dehydrogenase 2021406..2022881 Escherichia coli KO11FL 11779488 YP_005277600.1 CDS EKO11_1919 NC_016902.1 2023116 2024927 D TIGRFAM: 6-phosphogluconate dehydratase; KEGG: ebd:ECBD_1788 phosphogluconate dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; 6-phosphogluconate dehydratase 2023116..2024927 Escherichia coli KO11FL 11776781 YP_005277601.1 CDS EKO11_1920 NC_016902.1 2024964 2025605 D TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; KEGG: sbc:SbBS512_E2125 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; PFAM: KDPG and KHG aldolase; 2-dehydro-3-deoxyphosphogluconate aldolase 2024964..2025605 Escherichia coli KO11FL 11776782 YP_005277602.1 CDS EKO11_1921 NC_016902.1 2025661 2026839 R TIGRFAM: phosphoribosylglycinamide formyltransferase 2; KEGG: ebd:ECBD_1790 phosphoribosylglycinamide formyltransferase 2; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; phosphoribosylglycinamide formyltransferase 2 complement(2025661..2026839) Escherichia coli KO11FL 11776783 YP_005277603.1 CDS EKO11_1922 NC_016902.1 2026973 2027263 D PFAM: YebG family protein; KEGG: sdy:SDY_1134 DNA damage-inducible protein YebG; hypothetical protein 2026973..2027263 Escherichia coli KO11FL 11776784 YP_005277604.1 CDS EKO11_1923 NC_016902.1 2027330 2027686 D KEGG: sbc:SbBS512_E2122 hypothetical protein; hypothetical protein 2027330..2027686 Escherichia coli KO11FL 11776785 YP_005277605.1 CDS EKO11_1924 NC_016902.1 2027842 2027952 R KEGG: ebd:ECBD_1793 hypothetical protein; hypothetical protein complement(2027842..2027952) Escherichia coli KO11FL 11776786 YP_005277606.1 CDS EKO11_1925 NC_016902.1 2028012 2028671 D PFAM: protein of unknown function DUF533; KEGG: ssn:SSON_1302 hypothetical protein; hypothetical protein 2028012..2028671 Escherichia coli KO11FL 11776787 YP_005277607.1 CDS EKO11_1926 NC_016902.1 2028880 2030940 D KEGG: eoj:ECO26_2683 protease 2; PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller; oligopeptidase B 2028880..2030940 Escherichia coli KO11FL 11776788 YP_005277608.1 CDS EKO11_1927 NC_016902.1 2030937 2031599 R KEGG: sdy:SDY_1130 exodeoxyribonuclease X; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; Exonuclease RNase T and DNA polymerase III complement(2030937..2031599) Escherichia coli KO11FL 11776789 YP_005277609.1 CDS EKO11_1928 NC_016902.1 2031623 2032279 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: sbc:SbBS512_E2118 hydrolase, carbon-nitrogen family; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(2031623..2032279) Escherichia coli KO11FL 11779489 YP_005277610.1 CDS EKO11_1929 NC_016902.1 2032381 2032611 R KEGG: sdy:SDY_1128 DNA polymerase III subunit theta; PFAM: DNA polymerase II beta subunit; DNA-directed DNA polymerase complement(2032381..2032611) Escherichia coli KO11FL 11776790 YP_005277611.1 CDS EKO11_1930 NC_016902.1 2032750 2033124 D PFAM: copper resistance protein CopC; KEGG: eoi:ECO111_2349 hypothetical protein; copper resistance protein CopC 2032750..2033124 Escherichia coli KO11FL 11776791 YP_005277612.1 CDS EKO11_1931 NC_016902.1 2033128 2034000 D KEGG: eoh:ECO103_2031 putative inner membrane protein; putative inner membrane protein 2033128..2034000 Escherichia coli KO11FL 11776792 YP_005277613.1 CDS EKO11_1932 NC_016902.1 2034013 2034354 D PFAM: Protein of unknown function DUF2511; KEGG: sdy:SDY_1125 hypothetical protein; hypothetical protein 2034013..2034354 Escherichia coli KO11FL 11776793 YP_005277614.1 CDS EKO11_1933 NC_016902.1 2034750 2035406 D PFAM: metallophosphoesterase; KEGG: sbo:SBO_1253 serine/threonine protein phosphatase 1; metallophosphoesterase 2034750..2035406 Escherichia coli KO11FL 11776794 YP_005277615.1 CDS EKO11_1934 NC_016902.1 2035407 2035682 R PFAM: protein of unknown function DUF1482; KEGG: ssn:SSON_1324 hypothetical protein; hypothetical protein complement(2035407..2035682) Escherichia coli KO11FL 11776795 YP_005277616.1 CDS EKO11_1935 NC_016902.1 2035703 2035939 R PFAM: protein of unknown function DUF1480; KEGG: sdy:SDY_1987 hypothetical protein; hypothetical protein complement(2035703..2035939) Escherichia coli KO11FL 11776796 YP_005277617.1 CDS EKO11_1936 NC_016902.1 2036057 2037502 R KEGG: eoj:ECO26_2605 rRNA (cytosine-C(5)-)-methyltransferase RsmF; TIGRFAM: RNA methylase, NOL1/NOP2/sun family; PFAM: Fmu (Sun) domain protein; RNA methylase complement(2036057..2037502) Escherichia coli KO11FL 11776797 YP_005277618.1 CDS EKO11_1937 NC_016902.1 2037576 2040209 R PFAM: Mammalian cell entry related domain protein; KEGG: ebd:ECBD_1806 mammalian cell entry related domain protein; Mammalian cell entry related domain-containing protein complement(2037576..2040209) Escherichia coli KO11FL 11776798 YP_005277619.1 CDS EKO11_1938 NC_016902.1 2040178 2041461 R KEGG: eoh:ECO103_2024 hypothetical protein; TIGRFAM: integral membrane protein, PqiA family; PFAM: Paraquat-inducible protein A; PqiA family integral membrane protein complement(2040178..2041461) Escherichia coli KO11FL 11779490 YP_005277620.1 CDS EKO11_1939 NC_016902.1 2041537 2042088 D KEGG: sbc:SbBS512_E2100 GAF domain protein; PFAM: GAF domain protein; SMART: GAF domain protein; putative GAF sensor protein 2041537..2042088 Escherichia coli KO11FL 11776799 YP_005277621.1 CDS EKO11_1940 NC_016902.1 2042185 2042883 D PFAM: Fertility inhibition FinO-like; KEGG: sbo:SBO_1246 putative solute/DNA competence effector; Fertility inhibition FinO-like protein 2042185..2042883 Escherichia coli KO11FL 11776800 YP_005277622.1 CDS EKO11_1941 NC_016902.1 2042903 2044951 D SMART: peptidase S41; PDZ/DHR/GLGF domain protein; TIGRFAM: carboxyl-terminal protease; KEGG: sbc:SbBS512_E2098 carboxy-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein; carboxyl-terminal protease 2042903..2044951 Escherichia coli KO11FL 11776801 YP_005277623.1 CDS EKO11_1942 NC_016902.1 2045143 2046024 D PFAM: peptidase M48 Ste24p; KEGG: sdy:SDY_1977 heat shock protein HtpX; peptidase M48 Ste24p 2045143..2046024 Escherichia coli KO11FL 11776802 YP_005277624.1 CDS EKO11_1943 NC_016902.1 2046070 2047443 R PFAM: major facilitator superfamily MFS_1; KEGG: sbc:SbBS512_E2096 transporter, major facilitator family; major facilitator superfamily protein complement(2046070..2047443) Escherichia coli KO11FL 11776803 YP_005277625.1 CDS EKO11_1944 NC_016902.1 2047620 2048411 D KEGG: ssn:SSON_1334 putative regulator; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; IclR family transcriptional regulator 2047620..2048411 Escherichia coli KO11FL 11776804 YP_005277626.1 CDS EKO11_1945 NC_016902.1 2048554 2048793 R KEGG: sdy:SDY_1974 hypothetical protein; hypothetical protein complement(2048554..2048793) Escherichia coli KO11FL 11776805 YP_005277627.1 CDS EKO11_1946 NC_016902.1 2048913 2049101 R manually curated; KEGG: cko:CKO_01150 hypothetical protein; hypothetical protein complement(2048913..2049101) Escherichia coli KO11FL 11776806 YP_005277628.1 CDS EKO11_1947 NC_016902.1 2049170 2049457 D KEGG: ebd:ECBD_1816 uncharacterized protein YebO; hypothetical protein 2049170..2049457 Escherichia coli KO11FL 11776807 YP_005277629.1 CDS EKO11_1948 NC_016902.1 2050127 2050270 D KEGG: sdy:SDY_1970 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2627; hypothetical protein 2050127..2050270 Escherichia coli KO11FL 11776808 YP_005277630.1 CDS EKO11_1949 NC_016902.1 2050283 2050492 D KEGG: cro:ROD_18621 cold shock-like protein CspC; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock protein 2050283..2050492 Escherichia coli KO11FL 11776809 YP_005277631.1 CDS EKO11_1950 NC_016902.1 2050658 2051467 D KEGG: eoh:ECO103_2012 23S rRNA methyltransferase A; PFAM: Methyltransferase type 11; rRNA (guanine-N(1)-)-methyltransferase 2050658..2051467 Escherichia coli KO11FL 11779491 YP_005277632.1 CDS EKO11_1951 NC_016902.1 2051464 2052084 R KEGG: sdy:SDY_1967 hypothetical protein; manually curated; PFAM: protein of unknown function DUF204; hypothetical protein complement(2051464..2052084) Escherichia coli KO11FL 11776810 YP_005277633.1 CDS EKO11_1952 NC_016902.1 2052459 2052917 R PFAM: protein of unknown function DUF986; KEGG: sdy:SDY_1966 hypothetical protein; hypothetical protein complement(2052459..2052917) Escherichia coli KO11FL 11776811 YP_005277634.1 CDS EKO11_1953 NC_016902.1 2052972 2053823 R KEGG: sbo:SBO_1231 mannose-specific PTS system protein IID; TIGRFAM: PTS system, mannose/fructose/sorbose family, IID subunit; PFAM: PTS system mannose/fructose/sorbose family IID component; PTS system mannose/fructose/sorbose family transporter subunit IID complement(2052972..2053823) Escherichia coli KO11FL 11776812 YP_005277635.1 CDS EKO11_1954 NC_016902.1 2053836 2054636 R KEGG: sbc:SbBS512_E2084 PTS system, mannose-specific IIC component; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIC subunit; PFAM: phosphotransferase system PTS sorbose-specific IIC subunit; PTS system mannose/fructose/sorbose family transporter subunit IIC complement(2053836..2054636) Escherichia coli KO11FL 11776813 YP_005277636.1 CDS EKO11_1955 NC_016902.1 2054699 2055670 R TIGRFAM: PTS system, mannose/fructose/sorbose family, IIA subunit; PTS system, mannose/fructose/sorbose family, IIB subunit; KEGG: sbc:SbBS512_E2083 PTS system, mannose-specific IIAB component; PFAM: PTS system sorbose subfamily IIB component; PTS system fructose subfamily IIA component; PTS system mannose/fructose/sorbose family transporter subunit IIA complement(2054699..2055670) Escherichia coli KO11FL 11776814 YP_005277637.1 CDS EKO11_1956 NC_016902.1 2055936 2056145 D KEGG: ebd:ECBD_1825 putative cytoplasmic protein; putative cytoplasmic protein 2055936..2056145 Escherichia coli KO11FL 11776815 YP_005277638.1 CDS EKO11_1957 NC_016902.1 2056133 2057689 D PFAM: Integral membrane protein TerC; CBS domain containing protein; transporter-associated region; KEGG: ebd:ECBD_1826 integral membrane protein TerC; integral membrane protein TerC 2056133..2057689 Escherichia coli KO11FL 11779492 YP_005277639.1 CDS EKO11_1958 NC_016902.1 2057693 2059291 R KEGG: ebd:ECBD_1827 diguanylate phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein; diguanylate phosphodiesterase complement(2057693..2059291) Escherichia coli KO11FL 11776816 YP_005277640.1 CDS EKO11_1959 NC_016902.1 2059422 2060786 R TIGRFAM: L-serine dehydratase 1; KEGG: sbo:SBO_1270 L-serine deaminase; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; L-serine dehydratase 1 complement(2059422..2060786) Escherichia coli KO11FL 11776817 YP_005277641.1 CDS EKO11_1960 NC_016902.1 2060970 2061548 R PFAM: NUDIX hydrolase; KEGG: sdy:SDY_1719 hypothetical protein; NUDIX hydrolase complement(2060970..2061548) Escherichia coli KO11FL 11776818 YP_005277642.1 CDS EKO11_1961 NC_016902.1 2061552 2062913 R KEGG: ebd:ECBD_1830 para-aminobenzoate synthase, subunit I; TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; para-aminobenzoate synthase subunit I complement(2061552..2062913) Escherichia coli KO11FL 11776819 YP_005277643.1 CDS EKO11_1962 NC_016902.1 2062987 2063166 D PFAM: protein of unknown function UPF0181; KEGG: sdy:SDY_1717 hypothetical protein; hypothetical protein 2062987..2063166 Escherichia coli KO11FL 11776820 YP_005277644.1 CDS EKO11_1963 NC_016902.1 2063286 2063609 R KEGG: sbo:SBO_1276 hypothetical protein; manually curated; PFAM: Domain of unknown function DUF1889; hypothetical protein complement(2063286..2063609) Escherichia coli KO11FL 11779493 YP_005277645.1 CDS EKO11_1964 NC_016902.1 2064008 2064352 R PFAM: Endoribonuclease L-PSP; KEGG: sdy:SDY_1713 hypothetical protein; endoribonuclease L-PSP complement(2064008..2064352) Escherichia coli KO11FL 11779494 YP_005277646.1 CDS EKO11_1965 NC_016902.1 2064484 2066394 D KEGG: sbo:SBO_1280 putative enzyme; PFAM: type III restriction protein res subunit; SMART: helicase c2; DEAD-like helicase; type III restriction protein res subunit 2064484..2066394 Escherichia coli KO11FL 11776821 YP_005277647.1 CDS EKO11_1966 NC_016902.1 2066452 2067147 D PFAM: peptidase M22 glycoprotease; KEGG: ebw:BWG_1620 putative peptidase; peptidase M22 glycoprotease 2066452..2067147 Escherichia coli KO11FL 11776822 YP_005277648.1 CDS EKO11_1967 NC_016902.1 2067187 2067768 D KEGG: sfv:SFV_1423 putative outer membrane protein; TIGRFAM: outer membrane lipoprotein, Slp family; PFAM: outer membrane lipoprotein Slp; outer membrane lipoprotein, Slp family 2067187..2067768 Escherichia coli KO11FL 11776823 YP_005277649.1 CDS EKO11_1968 NC_016902.1 2067907 2069658 D PFAM: AMP-dependent synthetase and ligase; KEGG: ebd:ECBD_1837 long-chain-fatty-acid--CoA ligase; AMP-dependent synthetase and ligase 2067907..2069658 Escherichia coli KO11FL 11776824 YP_005277650.1 CDS EKO11_1969 NC_016902.1 2069740 2070855 D SMART: 3'-5' exonuclease; HRDC domain protein; TIGRFAM: ribonuclease D; KEGG: eok:G2583_2251 ribonuclease D; PFAM: 3'-5' exonuclease; HRDC domain protein; ribonuclease D 2069740..2070855 Escherichia coli KO11FL 11776825 YP_005277651.1 CDS EKO11_1970 NC_016902.1 2070909 2071874 R PFAM: ferredoxin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: eoh:ECO103_1992 putative oxidoreductase; ferredoxin complement(2070909..2071874) Escherichia coli KO11FL 11776826 YP_005277652.1 CDS EKO11_1971 NC_016902.1 2071930 2073054 R PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: ssn:SSON_1359 hypothetical protein; Rieske (2Fe-2S) iron-sulfur domain-containing protein complement(2071930..2073054) Escherichia coli KO11FL 11776827 YP_005277653.1 CDS EKO11_1972 NC_016902.1 2073086 2074696 R KEGG: eok:G2583_2248 transporter, betaine/carnitine/choline transporter (BCCT) family; TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; choline/carnitine/betaine transporter complement(2073086..2074696) Escherichia coli KO11FL 11776828 YP_005277654.1 CDS EKO11_1973 NC_016902.1 2074947 2076032 R TIGRFAM: tartrate dehydrogenase; KEGG: ebw:BWG_1613 putative dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; tartrate dehydrogenase complement(2074947..2076032) Escherichia coli KO11FL 11776829 YP_005277655.1 CDS EKO11_1974 NC_016902.1 2076135 2077058 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sbo:SBO_1289 putative transcriptional regulator LysR-type; LysR family transcriptional regulator 2076135..2077058 Escherichia coli KO11FL 11776830 YP_005277656.1 CDS EKO11_1975 NC_016902.1 2077185 2077823 D PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ebd:ECBD_1844 leucine export protein LeuE; lysine exporter protein LysE/YggA 2077185..2077823 Escherichia coli KO11FL 11779495 YP_005277657.1 CDS EKO11_1976 NC_016902.1 2077996 2078355 D PFAM: protein of unknown function DUF1971; KEGG: sdy:SDY_1697 hypothetical protein; hypothetical protein 2077996..2078355 Escherichia coli KO11FL 11779496 YP_005277658.1 CDS EKO11_1977 NC_016902.1 2078359 2078547 D PFAM: Domain of unknown function DUF1869; KEGG: eoh:ECO103_1985 hypothetical protein; hypothetical protein 2078359..2078547 Escherichia coli KO11FL 11776831 YP_005277659.1 CDS EKO11_1978 NC_016902.1 2078563 2078994 R PFAM: transposase IS200-family protein; KEGG: eoh:ECO103_1984 putative IS609 transposase TnpA; transposase IS200-family protein complement(2078563..2078994) Escherichia coli KO11FL 11776832 YP_005277660.1 CDS EKO11_1979 NC_016902.1 2079002 2080210 D manually curated; TIGRFAM: transposase, IS605 OrfB family; KEGG: eok:G2583_2932 IS605 family transposase orfB; PFAM: transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; transposase, IS605 OrfB family 2079002..2080210 Escherichia coli KO11FL 11776833 YP_005277661.1 CDS EKO11_1980 NC_016902.1 2080438 2080686 D PFAM: Transglycosylase-associated protein; KEGG: sdy:SDY_1695 hypothetical protein; transglycosylase 2080438..2080686 Escherichia coli KO11FL 11776834 YP_005277662.1 CDS EKO11_1981 NC_016902.1 2080953 2082107 R KEGG: eok:G2583_2241 GAF domain/diguanylate cyclase (GGDEF) domain protein; PFAM: GGDEF domain containing protein; GAF domain protein; manually curated; TIGRFAM: diguanylate cyclase; SMART: GGDEF domain containing protein; GAF domain protein; GAF sensor-containing diguanylate cyclase complement(2080953..2082107) Escherichia coli KO11FL 11776835 YP_005277663.1 CDS EKO11_1982 NC_016902.1 2082161 2082415 D PFAM: protein of unknown function DUF333; KEGG: eoi:ECO111_2296 hypothetical protein; hypothetical protein 2082161..2082415 Escherichia coli KO11FL 11776836 YP_005277664.1 CDS EKO11_1983 NC_016902.1 2082437 2082784 R PFAM: protein of unknown function DUF488; KEGG: ssn:SSON_1369 hypothetical protein; hypothetical protein complement(2082437..2082784) Escherichia coli KO11FL 11776837 YP_005277665.1 CDS EKO11_1984 NC_016902.1 2082839 2084020 R KEGG: eoh:ECO103_1977 putative transporter; TIGRFAM: cyanate transporter; PFAM: major facilitator superfamily MFS_1; cyanate transporter complement(2082839..2084020) Escherichia coli KO11FL 11776838 YP_005277666.1 CDS EKO11_1985 NC_016902.1 2084120 2084938 D KEGG: sbo:SBO_1303 putative AraC-type regulatory protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 2084120..2084938 Escherichia coli KO11FL 11776839 YP_005277667.1 CDS EKO11_1986 NC_016902.1 2084895 2085341 R PFAM: protein of unknown function DUF441; KEGG: sbo:SBO_1304 hypothetical protein; hypothetical protein complement(2084895..2085341) Escherichia coli KO11FL 11776840 YP_005277668.1 CDS EKO11_1987 NC_016902.1 2085463 2085615 D manually curated; KEGG: sdy:SDY_1686 hypothetical protein; hypothetical protein 2085463..2085615 Escherichia coli KO11FL 11776841 YP_005277669.1 CDS EKO11_1988 NC_016902.1 2085616 2086119 R PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: ssn:SSON_1374 hypothetical protein; YbaK/prolyl-tRNA synthetase associated domain-containing protein complement(2085616..2086119) Escherichia coli KO11FL 11776842 YP_005277670.1 CDS EKO11_1989 NC_016902.1 2086162 2087832 R SMART: GGDEF domain containing protein; manually curated; TIGRFAM: diguanylate cyclase; KEGG: eoj:ECO26_2553 putative diguanylate cyclase; PFAM: GGDEF domain containing protein; diguanylate cyclase complement(2086162..2087832) Escherichia coli KO11FL 11776843 YP_005277671.1 CDS EKO11_1990 NC_016902.1 2087833 2089308 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: eoi:ECO111_2288 hypothetical protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(2087833..2089308) Escherichia coli KO11FL 11776844 YP_005277672.1 CDS EKO11_1991 NC_016902.1 2089455 2090738 R PFAM: protein of unknown function DUF444; KEGG: sbo:SBO_1309 hypothetical protein; hypothetical protein complement(2089455..2090738) Escherichia coli KO11FL 11776845 YP_005277673.1 CDS EKO11_1992 NC_016902.1 2090851 2092785 R KEGG: sbo:SBO_1310 hypothetical protein; PFAM: PrkA AAA domain protein; PrkA serine kinase; SMART: PrkA AAA domain protein; putative serine protein kinase PrkA complement(2090851..2092785) Escherichia coli KO11FL 11776846 YP_005277674.1 CDS EKO11_1993 NC_016902.1 2093221 2093967 D PFAM: MltA-interacting MipA family protein; KEGG: sdy:SDY_1485 hypothetical protein; MltA-interacting MipA family protein 2093221..2093967 Escherichia coli KO11FL 11776847 YP_005277675.1 CDS EKO11_1994 NC_016902.1 2094057 2094911 D PFAM: aldo/keto reductase; KEGG: eoi:ECO111_2284 putative oxidoreductase; aldo/keto reductase 2094057..2094911 Escherichia coli KO11FL 11776848 YP_005277676.1 CDS EKO11_1995 NC_016902.1 2094962 2095846 R PFAM: Aldose 1-epimerase; KEGG: eoh:ECO103_1966 hypothetical protein; aldose 1-epimerase complement(2094962..2095846) Escherichia coli KO11FL 11776849 YP_005277677.1 CDS EKO11_1996 NC_016902.1 2095930 2096925 R TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: sdy:SDY_1488 glyceraldehyde-3-phosphate dehydrogenase A; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; glyceraldehyde-3-phosphate dehydrogenase, type I complement(2095930..2096925) Escherichia coli KO11FL 11776850 YP_005277678.1 CDS EKO11_1997 NC_016902.1 2097267 2097680 D TIGRFAM: methionine-R-sulfoxide reductase; KEGG: ssn:SSON_1385 methionine sulfoxide reductase B; PFAM: Methionine sulfoxide reductase B; methionine-R-sulfoxide reductase 2097267..2097680 Escherichia coli KO11FL 11776851 YP_005277679.1 CDS EKO11_1998 NC_016902.1 2097722 2097994 D PFAM: protein of unknown function DUF1315; KEGG: sbc:SbBS512_E2024 hypothetical protein; hypothetical protein 2097722..2097994 Escherichia coli KO11FL 11776852 YP_005277680.1 CDS EKO11_1999 NC_016902.1 2098364 2099440 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: eok:G2583_2223 oxidoreductase, zinc-binding dehydrogenase family; alcohol dehydrogenase 2098364..2099440 Escherichia coli KO11FL 11776853 YP_005277681.1 CDS EKO11_2000 NC_016902.1 2099467 2100846 D PFAM: major facilitator superfamily MFS_1; KEGG: ebw:BWG_1588 putative transporter; major facilitator superfamily protein 2099467..2100846 Escherichia coli KO11FL 11776854 YP_005277682.1 CDS EKO11_2001 NC_016902.1 2100863 2101906 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ebd:ECBD_1870 alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase 2100863..2101906 Escherichia coli KO11FL 11776855 YP_005277683.1 CDS EKO11_2002 NC_016902.1 2101927 2102763 D TIGRFAM: ketose-bisphosphate aldolase; KEGG: ebw:BWG_1586 putative aldolase; PFAM: ketose-bisphosphate aldolase class-II; ketose-bisphosphate aldolase 2101927..2102763 Escherichia coli KO11FL 11776856 YP_005277684.1 CDS EKO11_2003 NC_016902.1 2102768 2103715 D PFAM: PfkB domain protein; KEGG: ebw:BWG_1585 putative kinase; PfkB domain-containing protein 2102768..2103715 Escherichia coli KO11FL 11779497 YP_005277685.1 CDS EKO11_2004 NC_016902.1 2103725 2104705 D PFAM: aldo/keto reductase; KEGG: ebw:BWG_1584 putative oxidoreductase; aldo/keto reductase 2103725..2104705 Escherichia coli KO11FL 11776857 YP_005277686.1 CDS EKO11_2005 NC_016902.1 2104842 2105600 D KEGG: ebw:BWG_1583 putative DNA-binding transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator 2104842..2105600 Escherichia coli KO11FL 11776858 YP_005277687.1 CDS EKO11_2006 NC_016902.1 2105717 2107075 D KEGG: eok:G2583_2216 inner membrane metabolite transport protein YdjE; inner membrane metabolite transport protein YdjE 2105717..2107075 Escherichia coli KO11FL 11776859 YP_005277688.1 CDS EKO11_2007 NC_016902.1 2107168 2107809 R KEGG: sbc:SbBS512_E2023 nicotinamidase/pyrazinamidase; PFAM: isochorismatase hydrolase; nicotinamidase complement(2107168..2107809) Escherichia coli KO11FL 11776860 YP_005277689.1 CDS EKO11_2008 NC_016902.1 2107820 2108836 R KEGG: ssn:SSON_1388 cytoplasmic asparaginase I; TIGRFAM: L-asparaginase, type I; PFAM: Asparaginase/glutaminase; type I L-asparaginase complement(2107820..2108836) Escherichia coli KO11FL 11776861 YP_005277690.1 CDS EKO11_2009 NC_016902.1 2109003 2111003 R manually curated; TIGRFAM: signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 36K type; KEGG: sbc:SbBS512_E2021 protease 4; PFAM: peptidase S49; signal peptide peptidase SppA, 67K type complement(2109003..2111003) Escherichia coli KO11FL 11776862 YP_005277691.1 CDS EKO11_2010 NC_016902.1 2111020 2111571 D PFAM: nitroreductase; KEGG: sbo:SBO_1322 hypothetical protein; nitroreductase 2111020..2111571 Escherichia coli KO11FL 11776863 YP_005277692.1 CDS EKO11_2011 NC_016902.1 2111688 2112731 D KEGG: sdy:SDY_1509 selenophosphate synthetase; TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; selenide, water dikinase 2111688..2112731 Escherichia coli KO11FL 11776864 YP_005277693.1 CDS EKO11_2012 NC_016902.1 2112736 2114697 D TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; KEGG: eoh:ECO103_1957 DNA topoisomerase III; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein; DNA topoisomerase III 2112736..2114697 Escherichia coli KO11FL 11776865 YP_005277694.1 CDS EKO11_2013 NC_016902.1 2114825 2115865 D KEGG: eoi:ECO111_2273 hypothetical protein; hypothetical protein 2114825..2115865 Escherichia coli KO11FL 11776866 YP_005277695.1 CDS EKO11_2014 NC_016902.1 2115982 2117325 R PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: eoh:ECO103_1954 glutamate dehydrogenase; Glu/Leu/Phe/Val dehydrogenase complement(2115982..2117325) Escherichia coli KO11FL 11776867 YP_005277696.1 CDS EKO11_2015 NC_016902.1 2117561 2117833 D PFAM: protein of unknown function DUF1496; KEGG: sbc:SbBS512_E2012 hypothetical protein; hypothetical protein 2117561..2117833 Escherichia coli KO11FL 11776868 YP_005277697.1 CDS EKO11_2016 NC_016902.1 2117799 2118206 R PFAM: NUDIX hydrolase; KEGG: eoh:ECO103_1952 pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase; NUDIX hydrolase complement(2117799..2118206) Escherichia coli KO11FL 11776869 YP_005277698.1 CDS EKO11_2017 NC_016902.1 2118293 2118913 D PFAM: CDP-alcohol phosphatidyltransferase; KEGG: ebd:ECBD_1886 CDP-alcohol phosphatidyltransferase; CDP-alcohol phosphatidyltransferase 2118293..2118913 Escherichia coli KO11FL 11776870 YP_005277699.1 CDS EKO11_2018 NC_016902.1 2118922 2120229 R KEGG: eoh:ECO103_1950 putative thiosulfate sulfur transferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; Rhodanese domain-containing protein complement(2118922..2120229) Escherichia coli KO11FL 11779498 YP_005277700.1 CDS EKO11_2019 NC_016902.1 2120296 2120949 R KEGG: eoh:ECO103_1949 putative transporter subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(2120296..2120949) Escherichia coli KO11FL 11776871 YP_005277701.1 CDS EKO11_2020 NC_016902.1 2120949 2122484 R KEGG: eoh:ECO103_1948 fused transporter subunits of ABC superfamily: membrane components; ABC transporter, fused integral membrane subunits complement(2120949..2122484) Escherichia coli KO11FL 11776872 YP_005277702.1 CDS EKO11_2021 NC_016902.1 2122457 2123623 R PFAM: extracellular solute-binding protein family 1; KEGG: eoh:ECO103_1947 putative ABC transporter solute-binding protein; extracellular solute-binding protein complement(2122457..2123623) Escherichia coli KO11FL 11776873 YP_005277703.1 CDS EKO11_2022 NC_016902.1 2123633 2124181 R PFAM: Carboxymuconolactone decarboxylase; KEGG: eoh:ECO103_1946 hypothetical protein; Carboxymuconolactone decarboxylase complement(2123633..2124181) Escherichia coli KO11FL 11776874 YP_005277704.1 CDS EKO11_2023 NC_016902.1 2124181 2124888 R PFAM: SNARE associated Golgi protein; KEGG: eoh:ECO103_1945 hypothetical protein; hypothetical protein complement(2124181..2124888) Escherichia coli KO11FL 11779499 YP_005277705.1 CDS EKO11_2024 NC_016902.1 2124903 2125580 R KEGG: ssn:SSON_1406 hypothetical protein; hypothetical protein complement(2124903..2125580) Escherichia coli KO11FL 11776875 YP_005277706.1 CDS EKO11_2025 NC_016902.1 2125585 2126295 R PFAM: SNARE associated Golgi protein; KEGG: ebd:ECBD_1894 SNARE associated Golgi protein; hypothetical protein complement(2125585..2126295) Escherichia coli KO11FL 11776876 YP_005277707.1 CDS EKO11_2026 NC_016902.1 2126462 2127268 R KEGG: sbc:SbBS512_E1997 exonuclease III; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; exodeoxyribonuclease III complement(2126462..2127268) Escherichia coli KO11FL 11776877 YP_005277708.1 CDS EKO11_2027 NC_016902.1 2127714 2128934 D TIGRFAM: acetylornithine and succinylornithine aminotransferase; succinylornithine transaminase family; KEGG: eoh:ECO103_1941 bifunctional succinylornithine transaminase/acetylornithine transaminase; PFAM: aminotransferase class-III; acetylornithine and succinylornithine aminotransferase 2127714..2128934 Escherichia coli KO11FL 11776878 YP_005277709.1 CDS EKO11_2028 NC_016902.1 2128931 2129965 D TIGRFAM: arginine N-succinyltransferase; arginine/ornithine succinyltransferase subunit; KEGG: eoh:ECO103_1940 arginine succinyltransferase; PFAM: arginine N-succinyltransferase beta subunit; arginine N-succinyltransferase 2128931..2129965 Escherichia coli KO11FL 11776879 YP_005277710.1 CDS EKO11_2029 NC_016902.1 2129962 2131440 D KEGG: eoi:ECO111_2257 succinylglutamic semialdehyde dehydrogenase; TIGRFAM: succinylglutamic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; succinylglutamic semialdehyde dehydrogenase 2129962..2131440 Escherichia coli KO11FL 11776880 YP_005277711.1 CDS EKO11_2030 NC_016902.1 2131437 2132780 D TIGRFAM: succinylarginine dihydrolase; KEGG: eoj:ECO26_2520 succinylarginine dihydrolase; PFAM: Succinylarginine dihydrolase; succinylarginine dihydrolase 2131437..2132780 Escherichia coli KO11FL 11779500 YP_005277712.1 CDS EKO11_2031 NC_016902.1 2132773 2133741 D TIGRFAM: succinylglutamate desuccinylase; KEGG: sbc:SbBS512_E1990 succinylglutamate desuccinylase; PFAM: Succinylglutamate desuccinylase/aspartoacylase; succinylglutamate desuccinylase 2132773..2133741 Escherichia coli KO11FL 11776881 YP_005277713.1 CDS EKO11_2032 NC_016902.1 2134071 2134556 D PFAM: protein of unknown function Spy-related; KEGG: eok:G2583_2189 Spy; hypothetical protein 2134071..2134556 Escherichia coli KO11FL 11776882 YP_005277714.1 CDS EKO11_2033 NC_016902.1 2134759 2135334 D PFAM: protein of unknown function DUF886; KEGG: sfv:SFV_1478 hypothetical protein; hypothetical protein 2134759..2135334 Escherichia coli KO11FL 11776883 YP_005277715.1 CDS EKO11_2034 NC_016902.1 2135294 2136181 R KEGG: eoi:ECO111_2252 nucleotide excision repair endonuclease; PFAM: Excinuclease ABC C subunit domain protein; SMART: Excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain-containing protein complement(2135294..2136181) Escherichia coli KO11FL 11776884 YP_005277716.1 CDS EKO11_2035 NC_016902.1 2136411 2137238 R TIGRFAM: NAD+ synthetase; KEGG: ssn:SSON_1418 NAD synthetase; NAD+ synthetase complement(2136411..2137238) Escherichia coli KO11FL 11779501 YP_005277717.1 CDS EKO11_2036 NC_016902.1 2137440 2137778 D PFAM: SmpA/OmlA domain-containing protein; KEGG: sdy:SDY_1541 DNA-binding transcriptional activator OsmE; SmpA/OmlA domain-containing protein 2137440..2137778 Escherichia coli KO11FL 11779502 YP_005277718.1 CDS EKO11_2037 NC_016902.1 2138077 2138397 D TIGRFAM: PTS system, lactose/cellobiose family IIB subunit; KEGG: sbo:SBO_1352 N,N'-diacetylchitobiose-specific PTS system transporter subunit IIB; PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; PTS system lactose/cellobiose family transporter subunit IIB 2138077..2138397 Escherichia coli KO11FL 11776885 YP_005277719.1 CDS EKO11_2038 NC_016902.1 2138482 2139840 D TIGRFAM: PTS system, cellobiose-specific IIC subunit; PTS system, lactose/cellobiose family IIC subunit; KEGG: ebd:ECBD_1908 PTS system N,N'-diacetylchitobiose-specific transporter subunit IIC; PFAM: phosphotransferase system EIIC; PTS system cellobiose-specific transporter subunit IIC 2138482..2139840 Escherichia coli KO11FL 11776886 YP_005277720.1 CDS EKO11_2039 NC_016902.1 2139891 2140241 D KEGG: ssn:SSON_1422 PTS system N,N'-diacetylchitobiose-specific transporter subunit IIA; TIGRFAM: PTS system, lactose-specific IIa component; PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; PTS system, lactose-specific IIa component 2139891..2140241 Escherichia coli KO11FL 11776887 YP_005277721.1 CDS EKO11_2040 NC_016902.1 2140252 2141091 D KEGG: ssn:SSON_1423 DNA-binding transcriptional regulator ChbR; PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 2140252..2141091 Escherichia coli KO11FL 11776888 YP_005277722.1 CDS EKO11_2041 NC_016902.1 2141195 2142547 D PFAM: glycoside hydrolase family 4; KEGG: eoh:ECO103_1927 cryptic phospho-beta-glucosidase, NAD(P)-binding; glycoside hydrolase family protein 2141195..2142547 Escherichia coli KO11FL 11776889 YP_005277723.1 CDS EKO11_2042 NC_016902.1 2142560 2143318 D PFAM: YdjC family protein; KEGG: eoh:ECO103_1926 hypothetical protein; hypothetical protein 2142560..2143318 Escherichia coli KO11FL 11776890 YP_005277724.1 CDS EKO11_2043 NC_016902.1 2143365 2145626 R KEGG: eoi:ECO111_2243 hydroperoxidase II; PFAM: Catalase related subgroup; Catalase domain protein; catalase complement(2143365..2145626) Escherichia coli KO11FL 11779503 YP_005277725.1 CDS EKO11_2044 NC_016902.1 2145830 2146072 D PFAM: Cell division activator CedA; KEGG: ssn:SSON_1427 cell division modulator; Cell division activator CedA 2145830..2146072 Escherichia coli KO11FL 11779504 YP_005277726.1 CDS EKO11_2045 NC_016902.1 2146361 2146717 D KEGG: sfl:SF1498 hypothetical protein; hypothetical protein 2146361..2146717 Escherichia coli KO11FL 11776891 YP_005277727.1 CDS EKO11_2046 NC_016902.1 2146727 2147164 D KEGG: ebw:BWG_1543 hypothetical protein; hypothetical protein 2146727..2147164 Escherichia coli KO11FL 11776892 YP_005277728.1 CDS EKO11_2047 NC_016902.1 2147168 2148559 R PFAM: sodium:dicarboxylate symporter; KEGG: eoi:ECO111_2239 putative transporter; sodium:dicarboxylate symporter complement(2147168..2148559) Escherichia coli KO11FL 11776893 YP_005277729.1 CDS EKO11_2048 NC_016902.1 2148692 2149282 R PFAM: membrane-bound metal-dependent hydrolase; KEGG: ssn:SSON_1429 hypothetical protein; membrane-bound metal-dependent hydrolase complement(2148692..2149282) Escherichia coli KO11FL 11776894 YP_005277730.1 CDS EKO11_2049 NC_016902.1 2149445 2150113 R KEGG: sbc:SbBS512_E1972 2-deoxyglucose-6-phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase complement(2149445..2150113) Escherichia coli KO11FL 11776895 YP_005277731.1 CDS EKO11_2050 NC_016902.1 2150260 2150796 D KEGG: sdy:SDY_1819 hypothetical protein; hypothetical protein 2150260..2150796 Escherichia coli KO11FL 11776896 YP_005277732.1 CDS EKO11_2051 NC_016902.1 2150837 2151697 R PFAM: Fructosamine/Ketosamine-3-kinase; KEGG: sdy:SDY_1818 hypothetical protein; fructosamine/Ketosamine-3-kinase complement(2150837..2151697) Escherichia coli KO11FL 11776897 YP_005277733.1 CDS EKO11_2052 NC_016902.1 2151803 2152093 R KEGG: sdy:SDY_1817 hypothetical protein; hypothetical protein complement(2151803..2152093) Escherichia coli KO11FL 11776898 YP_005277734.1 CDS EKO11_2053 NC_016902.1 2152194 2153123 R KEGG: sfv:SFV_1498 6-phosphofructokinase 2; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; 1-phosphofructokinase complement(2152194..2153123) Escherichia coli KO11FL 11776899 YP_005277735.1 CDS EKO11_2054 NC_016902.1 2153410 2154168 D PFAM: protein of unknown function DUF481; KEGG: sbc:SbBS512_E1967 hypothetical protein; hypothetical protein 2153410..2154168 Escherichia coli KO11FL 11776900 YP_005277736.1 CDS EKO11_2055 NC_016902.1 2154221 2154439 R manually curated; KEGG: sfv:SFV_1500 hypothetical protein; hypothetical protein complement(2154221..2154439) Escherichia coli KO11FL 11776901 YP_005277737.1 CDS EKO11_2057 NC_016902.1 2156926 2158854 D KEGG: ssn:SSON_1439 threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Threonyl/alanyl tRNA synthetase SAD; TGS domain-containing protein; Anticodon-binding domain protein; threonyl-tRNA synthetase 2156926..2158854 Escherichia coli KO11FL 11776902 YP_005277738.1 CDS EKO11_2058 NC_016902.1 2158858 2159400 D manually curated; TIGRFAM: translation initiation factor IF-3; KEGG: ebd:ECBD_1927 translation initiation factor IF-3; PFAM: Translation initiation factor 3-like; translation initiation factor IF-3 2158858..2159400 Escherichia coli KO11FL 11776903 YP_005277739.1 CDS EKO11_2059 NC_016902.1 2159497 2159694 D KEGG: cro:ROD_13391 50S ribosomal subunit protein L35; TIGRFAM: ribosomal protein L35; PFAM: Ribosomal protein L35; 50S ribosomal protein L35 2159497..2159694 Escherichia coli KO11FL 11776904 YP_005277740.1 CDS EKO11_2060 NC_016902.1 2159747 2160103 D KEGG: cro:ROD_13401 50S ribosomal subunit protein L20; TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20; 50S ribosomal protein L20 2159747..2160103 Escherichia coli KO11FL 11776905 YP_005277741.1 CDS EKO11_2061 NC_016902.1 2160553 2161536 D KEGG: sfv:SFV_1509 phenylalanyl-tRNA synthetase subunit alpha; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein; phenylalanyl-tRNA synthetase subunit alpha 2160553..2161536 Escherichia coli KO11FL 11776906 YP_005277742.1 CDS EKO11_2062 NC_016902.1 2161551 2163938 D TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: ssn:SSON_1445 phenylalanyl-tRNA synthetase subunit beta; phenylalanyl-tRNA synthetase subunit beta 2161551..2163938 Escherichia coli KO11FL 11776907 YP_005277743.1 CDS EKO11_2063 NC_016902.1 2163943 2164242 D TIGRFAM: integration host factor, alpha subunit; PFAM: histone family protein DNA-binding protein; KEGG: cro:ROD_13431 integration host factor alpha subunit; SMART: histone family protein DNA-binding protein; integration host factor subunit alpha 2163943..2164242 Escherichia coli KO11FL 11776908 YP_005277744.1 CDS EKO11_2064 NC_016902.1 2164343 2165323 D PFAM: transport system permease protein; KEGG: eoh:ECO103_1855 vtamin B12-transporter permease; transport system permease 2164343..2165323 Escherichia coli KO11FL 11776909 YP_005277745.1 CDS EKO11_2065 NC_016902.1 2165386 2165937 D KEGG: sdy:SDY_1805 putative glutathione peroxidase; PFAM: glutathione peroxidase; peroxiredoxin 2165386..2165937 Escherichia coli KO11FL 11776910 YP_005277746.1 CDS EKO11_2066 NC_016902.1 2165937 2166686 D KEGG: sdy:SDY_1804 vitamin B12-transporter ATPase; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2165937..2166686 Escherichia coli KO11FL 11776911 YP_005277747.1 CDS EKO11_2067 NC_016902.1 2166764 2167228 D PFAM: NLP/P60 protein; KEGG: ssn:SSON_1450 lipoprotein; NLP/P60 protein 2166764..2167228 Escherichia coli KO11FL 11776912 YP_005277748.1 CDS EKO11_2068 NC_016902.1 2167475 2168188 D PFAM: EAL domain protein; KEGG: eoh:ECO103_1851 hypothetical protein; diguanylate phosphodiesterase 2167475..2168188 Escherichia coli KO11FL 11776913 YP_005277749.1 CDS EKO11_2069 NC_016902.1 2168251 2169687 D PFAM: protein of unknown function UPF0061; KEGG: eoh:ECO103_1850 hypothetical protein; hypothetical protein 2168251..2169687 Escherichia coli KO11FL 11776914 YP_005277750.1 CDS EKO11_2070 NC_016902.1 2169691 2169882 R PFAM: Hemin uptake protein hemP; KEGG: sdy:SDY_1799 hypothetical protein; hemin uptake protein HemP complement(2169691..2169882) Escherichia coli KO11FL 11779506 YP_005277751.1 CDS EKO11_2071 NC_016902.1 2170014 2171060 R TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: sbo:SBO_1424 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; phospho-2-dehydro-3-deoxyheptonate aldolase complement(2170014..2171060) Escherichia coli KO11FL 11776915 YP_005277752.1 CDS EKO11_2072 NC_016902.1 2171217 2172050 R PFAM: protein of unknown function DUF299; KEGG: sdy:SDY_1797 hypothetical protein; hypothetical protein complement(2171217..2172050) Escherichia coli KO11FL 11776916 YP_005277753.1 CDS EKO11_2073 NC_016902.1 2172383 2174761 D TIGRFAM: phosphoenolpyruvate synthase; KEGG: eoi:ECO111_2172 phosphoenolpyruvate synthase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; PEP-utilizing protein; phosphoenolpyruvate synthase 2172383..2174761 Escherichia coli KO11FL 11776917 YP_005277754.1 CDS EKO11_2074 NC_016902.1 2174818 2176461 R PFAM: AMP-dependent synthetase and ligase; KEGG: eok:G2583_2098 putative ligase/synthetase; AMP-dependent synthetase and ligase complement(2174818..2176461) Escherichia coli KO11FL 11776918 YP_005277755.1 CDS EKO11_2075 NC_016902.1 2176518 2176811 R KEGG: sbc:SbBS512_E1903 iron-sulfur cluster-binding protein; iron-sulfur cluster-binding protein complement(2176518..2176811) Escherichia coli KO11FL 11776919 YP_005277756.1 CDS EKO11_2076 NC_016902.1 2176808 2178097 R KEGG: eoh:ECO103_1843 hypothetical protein; PFAM: FAD dependent oxidoreductase; electron-transferring-flavoprotein dehydrogenase complement(2176808..2178097) Escherichia coli KO11FL 11776920 YP_005277757.1 CDS EKO11_2077 NC_016902.1 2178153 2179091 R PFAM: Electron transfer flavoprotein alpha subunit ; Electron transfer flavoprotein alpha/beta-subunit; KEGG: ebw:BWG_1512 electron transfer flavoprotein subunit YdiR; electron transfer flavoprotein subunit alpha complement(2178153..2179091) Escherichia coli KO11FL 11776921 YP_005277758.1 CDS EKO11_2078 NC_016902.1 2179111 2179974 R KEGG: eoj:ECO26_2426 putative electron transfer flavoprotein YdiQ; manually curated; PFAM: Electron transfer flavoprotein alpha/beta-subunit; electron transfer flavoprotein subunit alpha/beta complement(2179111..2179974) Escherichia coli KO11FL 11776922 YP_005277759.1 CDS EKO11_2079 NC_016902.1 2180191 2181102 D KEGG: sbc:SbBS512_E1899 transcriptional regulator, AraC family; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 2180191..2181102 Escherichia coli KO11FL 11776923 YP_005277760.1 CDS EKO11_2080 NC_016902.1 2181145 2182296 R PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: eok:G2583_2092 acyl-coA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(2181145..2182296) Escherichia coli KO11FL 11776924 YP_005277761.1 CDS EKO11_2081 NC_016902.1 2182310 2183905 R PFAM: coenzyme A transferase; KEGG: eoh:ECO103_1837 fused putative acetyl-CoA: acetoacetyl-CoA transferase: alpha subunit/beta subunit; coenzyme A transferase complement(2182310..2183905) Escherichia coli KO11FL 11776925 YP_005277762.1 CDS EKO11_2082 NC_016902.1 2184049 2184807 R TIGRFAM: 3-dehydroquinate dehydratase, type I; KEGG: eoh:ECO103_1836 3-dehydroquinate dehydratase; PFAM: dehydroquinase class I; 3-dehydroquinate dehydratase complement(2184049..2184807) Escherichia coli KO11FL 11776926 YP_005277763.1 CDS EKO11_2083 NC_016902.1 2184839 2185705 R PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; KEGG: eoh:ECO103_1835 quinate/shikimate dehydrogenase; shikimate dehydrogenase complement(2184839..2185705) Escherichia coli KO11FL 11779507 YP_005277764.1 CDS EKO11_2084 NC_016902.1 2185717 2186982 R PFAM: major facilitator superfamily MFS_1; KEGG: eok:G2583_2088 transporter, major facilitator family; major facilitator superfamily protein complement(2185717..2186982) Escherichia coli KO11FL 11776927 YP_005277765.1 CDS EKO11_2085 NC_016902.1 2187209 2188423 R PFAM: major facilitator superfamily MFS_1; KEGG: eoj:ECO26_2418 putative transporter; major facilitator superfamily protein complement(2187209..2188423) Escherichia coli KO11FL 11776928 YP_005277766.1 CDS EKO11_2086 NC_016902.1 2188523 2188879 R PFAM: Domain of unknown function DUF1870; KEGG: ebw:BWG_1503 hypothetical protein; hypothetical protein complement(2188523..2188879) Escherichia coli KO11FL 11779508 YP_005277767.1 CDS EKO11_2087 NC_016902.1 2189308 2190420 R PFAM: protein of unknown function UPF0118; KEGG: sdy:SDY_1676 putative inner membrane protein; hypothetical protein complement(2189308..2190420) Escherichia coli KO11FL 11776929 YP_005277768.1 CDS EKO11_2088 NC_016902.1 2190809 2193865 D PFAM: FAD linked oxidase domain protein; KEGG: eoh:ECO103_1830 putative FAD-linked oxidoreductase; FAD linked oxidase domain-containing protein 2190809..2193865 Escherichia coli KO11FL 11776930 YP_005277769.1 CDS EKO11_2089 NC_016902.1 2193862 2194272 D PFAM: thioesterase superfamily protein; KEGG: ebd:ECBD_1960 hypothetical protein; thioesterase superfamily protein 2193862..2194272 Escherichia coli KO11FL 11776931 YP_005277770.1 CDS EKO11_2090 NC_016902.1 2194291 2194560 D manually curated; KEGG: sfv:SFV_1708 hypothetical protein; hypothetical protein 2194291..2194560 Escherichia coli KO11FL 11776932 YP_005277771.1 CDS EKO11_2091 NC_016902.1 2195108 2195476 D KEGG: sbo:SBO_1446 iron-sulfur cluster assembly scaffold protein; TIGRFAM: FeS assembly scaffold SufA; iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; FeS assembly scaffold SufA 2195108..2195476 Escherichia coli KO11FL 11776933 YP_005277772.1 CDS EKO11_2092 NC_016902.1 2195485 2196972 D KEGG: eoi:ECO111_2152 cysteine desulfurase activator complex subunit SufB; TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; FeS assembly protein SufB 2195485..2196972 Escherichia coli KO11FL 11776934 YP_005277773.1 CDS EKO11_2093 NC_016902.1 2196982 2197728 D TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; KEGG: ssn:SSON_1474 cysteine desulfurase ATPase component; SMART: AAA ATPase; FeS assembly ATPase SufC 2196982..2197728 Escherichia coli KO11FL 11776935 YP_005277774.1 CDS EKO11_2094 NC_016902.1 2197703 2198974 D KEGG: eoi:ECO111_2150 cysteine desulfurase activator complex subunit SufD; TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; FeS assembly protein SufD 2197703..2198974 Escherichia coli KO11FL 11776936 YP_005277775.1 CDS EKO11_2095 NC_016902.1 2198971 2200191 D KEGG: eoi:ECO111_2149 bifunctional cysteine desulfurase/selenocysteine lyase; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; SufS subfamily cysteine desulfurase 2198971..2200191 Escherichia coli KO11FL 11776937 YP_005277776.1 CDS EKO11_2096 NC_016902.1 2200204 2200620 D PFAM: Fe-S metabolism associated SufE; KEGG: ebd:ECBD_1966 cysteine desufuration protein SufE; Fe-S metabolism associated SufE 2200204..2200620 Escherichia coli KO11FL 11776938 YP_005277777.1 CDS EKO11_2097 NC_016902.1 2200769 2201773 D KEGG: sfv:SFV_1701 hypothetical protein; PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; ErfK/YbiS/YcfS/YnhG family protein 2200769..2201773 Escherichia coli KO11FL 11776939 YP_005277778.1 CDS EKO11_2098 NC_016902.1 2201837 2202073 R PFAM: LPP repeat-containing protein; KEGG: sdy:SDY_1908 murein lipoprotein; LPP repeat-containing protein complement(2201837..2202073) Escherichia coli KO11FL 11776940 YP_005277779.1 CDS EKO11_2099 NC_016902.1 2202384 2203796 R TIGRFAM: pyruvate kinase; KEGG: sbc:SbBS512_E1877 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; pyruvate kinase complement(2202384..2203796) Escherichia coli KO11FL 11779509 YP_005277780.1 CDS EKO11_2100 NC_016902.1 2204353 2204562 D KEGG: sdy:SDY_1904 hypothetical protein; hypothetical protein 2204353..2204562 Escherichia coli KO11FL 11779510 YP_005277781.1 CDS EKO11_2101 NC_016902.1 2205018 2205644 D KEGG: sbo:SBO_1458 hypothetical protein; hypothetical protein 2205018..2205644 Escherichia coli KO11FL 11776941 YP_005277782.1 CDS EKO11_2102 NC_016902.1 2205665 2207767 D PFAM: Aldehyde ferredoxin oxidoreductase ; aldehyde ferredoxin oxidoreductase; KEGG: ebd:ECBD_1972 putative oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase 2205665..2207767 Escherichia coli KO11FL 11776942 YP_005277783.1 CDS EKO11_2103 NC_016902.1 2207780 2208418 D KEGG: eoh:ECO103_1812 hypothetical protein; hypothetical protein 2207780..2208418 Escherichia coli KO11FL 11776943 YP_005277784.1 CDS EKO11_2104 NC_016902.1 2208482 2209150 D KEGG: sdy:SDY_1899 putative oxidoreductase, Fe-S subunit; putative oxidoreductase, Fe-S subunit 2208482..2209150 Escherichia coli KO11FL 11776944 YP_005277785.1 CDS EKO11_2105 NC_016902.1 2209147 2209932 D KEGG: eoi:ECO111_2139 putative cytochrome; putative cytochrome 2209147..2209932 Escherichia coli KO11FL 11776945 YP_005277786.1 CDS EKO11_2106 NC_016902.1 2209984 2210748 D KEGG: eoh:ECO103_1809 hypothetical protein; hypothetical protein 2209984..2210748 Escherichia coli KO11FL 11776946 YP_005277787.1 CDS EKO11_2107 NC_016902.1 2210760 2212364 R KEGG: eoh:ECO103_1808 hypothetical protein; hypothetical protein complement(2210760..2212364) Escherichia coli KO11FL 11776947 YP_005277788.1 CDS EKO11_2108 NC_016902.1 2212490 2212795 R PFAM: Putative mono-oxygenase ydhR; KEGG: sbc:SbBS512_E1865 hypothetical protein; Putative mono-oxygenase ydhR complement(2212490..2212795) Escherichia coli KO11FL 11776948 YP_005277789.1 CDS EKO11_2109 NC_016902.1 2213368 2214624 D KEGG: sbc:SbBS512_E1862 hypothetical protein; hypothetical protein 2213368..2214624 Escherichia coli KO11FL 11779511 YP_005277790.1 CDS EKO11_2110 NC_016902.1 2214665 2216038 R KEGG: sbc:SbBS512_E1861 multidrug efflux protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein complement(2214665..2216038) Escherichia coli KO11FL 11779512 YP_005277791.1 CDS EKO11_2111 NC_016902.1 2216253 2216894 D TIGRFAM: riboflavin synthase, alpha subunit; KEGG: sdy:SDY_1888 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein; riboflavin synthase subunit alpha 2216253..2216894 Escherichia coli KO11FL 11776951 YP_005277792.1 CDS EKO11_2112 NC_016902.1 2216934 2218082 R PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; KEGG: ssn:SSON_1495 cyclopropane fatty acyl phospholipid synthase; cyclopropane-fatty-acyl-phospholipid synthase complement(2216934..2218082) Escherichia coli KO11FL 11779513 YP_005277793.1 CDS EKO11_2113 NC_016902.1 2218373 2219584 R KEGG: ebd:ECBD_1983 inner membrane transport protein YdhC; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; Bcr/CflA subfamily drug resistance transporter complement(2218373..2219584) Escherichia coli KO11FL 11776952 YP_005277794.1 CDS EKO11_2114 NC_016902.1 2219697 2220629 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sdy:SDY_1885 putative DNA-binding transcriptional regulator; LysR family transcriptional regulator 2219697..2220629 Escherichia coli KO11FL 11776953 YP_005277795.1 CDS EKO11_2115 NC_016902.1 2220626 2221651 R KEGG: sbc:SbBS512_E1857 DNA-binding transcriptional repressor PurR; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; LacI family transcriptional regulator complement(2220626..2221651) Escherichia coli KO11FL 11776954 YP_005277796.1 CDS EKO11_2116 NC_016902.1 2221639 2221863 R manually curated; KEGG: cko:CKO_01671 hypothetical protein; hypothetical protein complement(2221639..2221863) Escherichia coli KO11FL 11776955 YP_005277797.1 CDS EKO11_2117 NC_016902.1 2222205 2223374 D PFAM: major facilitator superfamily MFS_1; KEGG: sdy:SDY_1883 putative transport protein; major facilitator superfamily protein 2222205..2223374 Escherichia coli KO11FL 11776956 YP_005277798.1 CDS EKO11_2118 NC_016902.1 2223609 2224190 R KEGG: sdy:SDY_1882 superoxide dismutase; PFAM: Manganese/iron superoxide dismutase-like; Superoxide dismutase complement(2223609..2224190) Escherichia coli KO11FL 11776957 YP_005277799.1 CDS EKO11_2119 NC_016902.1 2224318 2225133 R PFAM: NLP/P60 protein; KEGG: sbc:SbBS512_E1852 NlpC/P60 family protein; NLP/P60 protein complement(2224318..2225133) Escherichia coli KO11FL 11776958 YP_005277800.1 CDS EKO11_2120 NC_016902.1 2225468 2225815 D KEGG: sdy:SDY_1880 hypothetical protein; TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; glutaredoxin-like protein 2225468..2225815 Escherichia coli KO11FL 11776959 YP_005277801.1 CDS EKO11_2121 NC_016902.1 2225866 2230482 R KEGG: eoi:ECO111_2123 putative ATP-dependent helicase Lhr; PFAM: DEAD/H associated domain protein; DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; AAA ATPase; helicase domain protein; DEAD/DEAH box helicase complement(2225866..2230482) Escherichia coli KO11FL 11776960 YP_005277802.1 CDS EKO11_2122 NC_016902.1 2230575 2231222 R TIGRFAM: ribonuclease T; PFAM: Exonuclease RNase T and DNA polymerase III; KEGG: sdy:SDY_1878 ribonuclease T; SMART: Exonuclease; ribonuclease T complement(2230575..2231222) Escherichia coli KO11FL 11776961 YP_005277803.1 CDS EKO11_2123 NC_016902.1 2231325 2231732 R TIGRFAM: lactoylglutathione lyase; KEGG: sdy:SDY_1877 glyoxalase I; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; lactoylglutathione lyase complement(2231325..2231732) Escherichia coli KO11FL 11776962 YP_005277804.1 CDS EKO11_2124 NC_016902.1 2231813 2232910 R PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: eoh:ECO103_1791 N-ethylmaleimide reductase; NADH:flavin oxidoreductase complement(2231813..2232910) Escherichia coli KO11FL 11776963 YP_005277805.1 CDS EKO11_2125 NC_016902.1 2232947 2233546 R PFAM: regulatory protein TetR; KEGG: sbc:SbBS512_E1841 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(2232947..2233546) Escherichia coli KO11FL 11776964 YP_005277806.1 CDS EKO11_2127 NC_016902.1 2233937 2234833 D PFAM: aldo/keto reductase; KEGG: eoi:ECO111_2117 putative oxidoreductase; aldo/keto reductase 2233937..2234833 Escherichia coli KO11FL 11776966 YP_005277807.1 CDS EKO11_2128 NC_016902.1 2234899 2235435 D KEGG: sfx:S1805 superoxide dismutase; manually curated; PFAM: superoxide dismutase copper/zinc binding; superoxide dismutase copper/zinc binding protein 2234899..2235435 Escherichia coli KO11FL 11776967 YP_005277808.1 CDS EKO11_2129 NC_016902.1 2235436 2237448 R PFAM: Fusaric acid resistance protein conserved region; KEGG: eoi:ECO111_2115 hypothetical protein; fusaric acid resistance protein complement(2235436..2237448) Escherichia coli KO11FL 11776968 YP_005277809.1 CDS EKO11_2130 NC_016902.1 2237448 2238305 R KEGG: ebd:ECBD_1999 secretion protein HlyD family protein; manually curated; PFAM: secretion protein HlyD family protein; secretion protein HlyD family protein complement(2237448..2238305) Escherichia coli KO11FL 11776969 YP_005277810.1 CDS EKO11_2131 NC_016902.1 2238308 2238544 R PFAM: protein of unknown function DUF1656; KEGG: ssn:SSON_1513 hypothetical protein; hypothetical protein complement(2238308..2238544) Escherichia coli KO11FL 11776970 YP_005277811.1 CDS EKO11_2132 NC_016902.1 2238745 2239179 D KEGG: sfv:SFV_1661 transcriptional regulator SlyA; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; MarR family transcriptional regulator 2238745..2239179 Escherichia coli KO11FL 11776971 YP_005277812.1 CDS EKO11_2133 NC_016902.1 2239226 2239693 R KEGG: sdy:SDY_1864 putative outer membrane protein; putative outer membrane protein complement(2239226..2239693) Escherichia coli KO11FL 11776972 YP_005277813.1 CDS EKO11_2134 NC_016902.1 2239967 2241076 D PFAM: protein of unknown function UPF0075; KEGG: eoi:ECO111_2110 anhydro-N-acetylmuramic acid kinase; hypothetical protein 2239967..2241076 Escherichia coli KO11FL 11776973 YP_005277814.1 CDS EKO11_2135 NC_016902.1 2241180 2241503 D PFAM: Protein of unknown function DUF2091, periplasmic; KEGG: sbc:SbBS512_E1831 lysozyme inhibitor; hypothetical protein 2241180..2241503 Escherichia coli KO11FL 11776974 YP_005277815.1 CDS EKO11_2136 NC_016902.1 2241562 2242218 D TIGRFAM: pyridoxamine 5'-phosphate oxidase; KEGG: sbc:SbBS512_E1830 pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; Pyridoxine 5'-phosphate oxidase, dimerisation-like; pyridoxamine 5'-phosphate oxidase 2241562..2242218 Escherichia coli KO11FL 11776975 YP_005277816.1 CDS EKO11_2137 NC_016902.1 2242347 2243621 D SMART: RNA-binding S4 domain protein; TIGRFAM: tyrosyl-tRNA synthetase; KEGG: sbc:SbBS512_E1829 tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein; tyrosyl-tRNA synthetase 2242347..2243621 Escherichia coli KO11FL 11779514 YP_005277817.1 CDS EKO11_2138 NC_016902.1 2243683 2244543 D TIGRFAM: pyridoxal kinase; KEGG: sbo:SBO_1498 pyridoxamine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; pyridoxal kinase 2243683..2244543 Escherichia coli KO11FL 11779515 YP_005277818.1 CDS EKO11_2139 NC_016902.1 2244587 2245192 R PFAM: Glutathione S-transferase domain; KEGG: sdy:SDY_1858 glutathionine S-transferase; glutathione S-transferase complement(2244587..2245192) Escherichia coli KO11FL 11776976 YP_005277819.1 CDS EKO11_2140 NC_016902.1 2245297 2246799 R KEGG: sbc:SbBS512_E1824 putative tripeptide transporter permease; TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; amino acid/peptide transporter complement(2245297..2246799) Escherichia coli KO11FL 11776977 YP_005277820.1 CDS EKO11_2141 NC_016902.1 2247082 2247282 R KEGG: ebd:ECBD_2010 hypothetical protein; hypothetical protein complement(2247082..2247282) Escherichia coli KO11FL 11776978 YP_005277821.1 CDS EKO11_2142 NC_016902.1 2247410 2248045 R SMART: HhH-GPD family protein; iron-sulfur cluster loop; TIGRFAM: endonuclease III; KEGG: sbc:SbBS512_E1822 endonuclease III; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; endonuclease III complement(2247410..2248045) Escherichia coli KO11FL 11776979 YP_005277822.1 CDS EKO11_2143 NC_016902.1 2248045 2248740 R KEGG: sdy:SDY_1855 electron transport complex RsxE subunit; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; PFAM: RnfA-Nqr electron transport subunit; RnfABCDGE type electron transport complex subunit E complement(2248045..2248740) Escherichia coli KO11FL 11776980 YP_005277823.1 CDS EKO11_2144 NC_016902.1 2248744 2249364 R TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain protein; KEGG: sbc:SbBS512_E1820 electron transport complex protein RnfG; SMART: FMN-binding domain protein; RnfABCDGE type electron transport complex subunit G complement(2248744..2249364) Escherichia coli KO11FL 11776981 YP_005277824.1 CDS EKO11_2145 NC_016902.1 2249368 2250426 R KEGG: sfv:SFV_1647 electron transport complex protein RnfD; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein; RnfABCDGE type electron transport complex subunit D complement(2249368..2250426) Escherichia coli KO11FL 11776982 YP_005277825.1 CDS EKO11_2146 NC_016902.1 2250427 2252649 R KEGG: eoh:ECO103_1770 electron transport complex protein RnfC; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; RnfABCDGE type electron transport complex subunit C complement(2250427..2252649) Escherichia coli KO11FL 11776983 YP_005277826.1 CDS EKO11_2147 NC_016902.1 2252642 2253220 R KEGG: ssn:SSON_1530 electron transport complex protein RnfB; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: Fe-S cluster domain protein; RnfABCDGE type electron transport complex subunit B complement(2252642..2253220) Escherichia coli KO11FL 11776984 YP_005277827.1 CDS EKO11_2148 NC_016902.1 2253220 2253801 R KEGG: sdy:SDY_1850 Na(+)-translocating NADH-quinone reductase subunit E; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; RnfABCDGE type electron transport complex subunit A complement(2253220..2253801) Escherichia coli KO11FL 11776985 YP_005277828.1 CDS EKO11_2149 NC_016902.1 2253878 2254318 R PFAM: Protein of unknown function DUF2569; KEGG: ssn:SSON_1532 hypothetical protein; hypothetical protein complement(2253878..2254318) Escherichia coli KO11FL 11779516 YP_005277829.1 CDS EKO11_2150 NC_016902.1 2254404 2254619 R PFAM: Haemolysin expression modulating family protein; KEGG: sdy:SDY_1848 OriC-binding nucleoid-associated protein; hemolysin expression modulating family protein complement(2254404..2254619) Escherichia coli KO11FL 11779517 YP_005277830.1 CDS EKO11_2151 NC_016902.1 2254892 2255092 R manually curated; KEGG: ebd:ECBD_2020 hypothetical protein; hypothetical protein complement(2254892..2255092) Escherichia coli KO11FL 11776986 YP_005277831.1 CDS EKO11_2152 NC_016902.1 2255260 2256300 D PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sbo:SBO_1510 putative oxidoreductase; oxidoreductase domain-containing protein 2255260..2256300 Escherichia coli KO11FL 11776987 YP_005277832.1 CDS EKO11_2153 NC_016902.1 2256335 2257336 R TIGRFAM: adenosine deaminase; KEGG: ebd:ECBD_2022 adenosine deaminase; PFAM: adenosine/AMP deaminase; adenosine deaminase complement(2256335..2257336) Escherichia coli KO11FL 11776988 YP_005277833.1 CDS EKO11_2154 NC_016902.1 2257440 2258612 R PFAM: aminotransferase class I and II; KEGG: eoh:ECO103_1762 bifunctional beta-cystathionase, PLP-dependent and regulator of maltose regulon; class I and II aminotransferase complement(2257440..2258612) Escherichia coli KO11FL 11776989 YP_005277834.1 CDS EKO11_2155 NC_016902.1 2258622 2260214 R TIGRFAM: PTS system, maltose and glucose-specific IIBC subunit; PTS system, maltose and glucose-specific subfamily, IIC subunit; PTS system, glucose-like IIB subunint; KEGG: ssn:SSON_1537 bifunctional PTS system maltose and glucose-specific transporter subunits IICB; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; PTS system maltose and glucose-specific transporter subunit IIBC complement(2258622..2260214) Escherichia coli KO11FL 11776990 YP_005277835.1 CDS EKO11_2156 NC_016902.1 2260389 2261417 D KEGG: sbc:SbBS512_E1808 DNA-binding transcriptional repressor MalI; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; LacI family transcriptional regulator 2260389..2261417 Escherichia coli KO11FL 11776991 YP_005277836.1 CDS EKO11_2157 NC_016902.1 2261529 2262296 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: eoh:ECO103_1759 7-alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase SDR 2261529..2262296 Escherichia coli KO11FL 11776992 YP_005277837.1 CDS EKO11_2158 NC_016902.1 2262537 2263115 D PFAM: regulatory protein TetR; KEGG: sbc:SbBS512_E1805 transcriptional regulator UidR; regulatory protein TetR 2262537..2263115 Escherichia coli KO11FL 11776993 YP_005277838.1 CDS EKO11_2159 NC_016902.1 2263503 2265314 D KEGG: eoh:ECO103_1757 beta-D-glucuronidase; PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; Beta-glucuronidase 2263503..2265314 Escherichia coli KO11FL 11776994 YP_005277839.1 CDS EKO11_2160 NC_016902.1 2265311 2266684 D KEGG: eoj:ECO26_2344 glucuronide transporter; TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1; sugar (Glycoside-Pentoside-Hexuronide) transporter 2265311..2266684 Escherichia coli KO11FL 11776995 YP_005277840.1 CDS EKO11_2161 NC_016902.1 2266723 2267988 D PFAM: outer membrane porin; KEGG: ebd:ECBD_2030 putative outer membrane porin protein; outer membrane porin 2266723..2267988 Escherichia coli KO11FL 11776996 YP_005277841.1 CDS EKO11_2162 NC_016902.1 2268049 2268144 R KEGG: ebd:ECBD_2031 hypothetical protein; hypothetical protein complement(2268049..2268144) Escherichia coli KO11FL 11776997 YP_005277842.1 CDS EKO11_2163 NC_016902.1 2268214 2269722 R PFAM: protein of unknown function DUF945; KEGG: ebd:ECBD_2032 protein of unknown function DUF945; hypothetical protein complement(2268214..2269722) Escherichia coli KO11FL 11776998 YP_005277843.1 CDS EKO11_2164 NC_016902.1 2269823 2270998 R TIGRFAM: mannose-6-phosphate isomerase, class I; KEGG: sdy:SDY_1829 mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type I; mannose-6-phosphate isomerase complement(2269823..2270998) Escherichia coli KO11FL 11776999 YP_005277844.1 CDS EKO11_2165 NC_016902.1 2271197 2272843 D KEGG: sbc:SbBS512_E1798 fumarate hydratase; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit beta 2271197..2272843 Escherichia coli KO11FL 11777000 YP_005277845.1 CDS EKO11_2166 NC_016902.1 2272986 2274389 D KEGG: sbc:SbBS512_E1796 fumarate hydratase; TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; Fumarase C-like; class II fumarate hydratase 2272986..2274389 Escherichia coli KO11FL 11777001 YP_005277846.1 CDS EKO11_2167 NC_016902.1 2274386 2275315 R KEGG: sfv:SFV_1626 DNA replication terminus site-binding protein; TIGRFAM: DNA replication terminus site-binding protein; PFAM: site-binding protein DNA replication region; DNA replication terminus site-binding protein complement(2274386..2275315) Escherichia coli KO11FL 11777002 YP_005277847.1 CDS EKO11_2168 NC_016902.1 2275391 2276692 R KEGG: eoi:ECO111_2078 sensor protein RstB; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; integral membrane sensor signal transduction histidine kinase complement(2275391..2276692) Escherichia coli KO11FL 11777003 YP_005277848.1 CDS EKO11_2169 NC_016902.1 2276696 2277475 R manually curated; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; KEGG: sfv:SFV_1623 DNA-binding transcriptional regulator RstA; SMART: response regulator receiver; two component transcriptional regulator, winged helix family complement(2276696..2277475) Escherichia coli KO11FL 11777004 YP_005277849.1 CDS EKO11_2170 NC_016902.1 2277544 2277879 D PFAM: GlpM family protein; KEGG: sdy:SDY_1546 hypothetical protein; GlpM family protein 2277544..2277879 Escherichia coli KO11FL 11777005 YP_005277850.1 CDS EKO11_2171 NC_016902.1 2277876 2278598 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: eoh:ECO103_1746 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR complement(2277876..2278598) Escherichia coli KO11FL 11777006 YP_005277851.1 CDS EKO11_2172 NC_016902.1 2278635 2280017 R KEGG: sfv:SFV_1620 putative arginine/ornithine antiporter; TIGRFAM: arginine/ornithine antiporter; PFAM: amino acid permease-associated region; arginine/ornithine antiporter complement(2278635..2280017) Escherichia coli KO11FL 11777007 YP_005277852.1 CDS EKO11_2173 NC_016902.1 2280203 2281147 R PFAM: protein of unknown function DUF1471; KEGG: sdy:SDY_1549 hypothetical protein; hypothetical protein complement(2280203..2281147) Escherichia coli KO11FL 11777008 YP_005277853.1 CDS EKO11_2174 NC_016902.1 2281617 2283203 D manually curated; TIGRFAM: NAD(P) transhydrogenase, alpha subunit; KEGG: eok:G2583_1997 NAD(P) transhydrogenase, alpha subunit; PFAM: alanine dehydrogenase/PNT domain protein; NAD(P) transhydrogenase subunit alpha 2281617..2283203 Escherichia coli KO11FL 11777009 YP_005277854.1 CDS EKO11_2175 NC_016902.1 2283214 2284602 D KEGG: sdy:SDY_1551 pyridine nucleotide transhydrogenase; PFAM: NAD(P) transhydrogenase beta subunit; NAD(P)(+) transhydrogenase 2283214..2284602 Escherichia coli KO11FL 11777010 YP_005277855.1 CDS EKO11_2176 NC_016902.1 2284627 2285661 R PFAM: protein of unknown function UPF0118; KEGG: sbc:SbBS512_E1787 putative transport protein; hypothetical protein complement(2284627..2285661) Escherichia coli KO11FL 11777011 YP_005277856.1 CDS EKO11_2177 NC_016902.1 2285796 2285966 D manually curated; KEGG: sec:SC1499 hypothetical protein; hypothetical protein 2285796..2285966 Escherichia coli KO11FL 11777012 YP_005277857.1 CDS EKO11_2178 NC_016902.1 2286073 2286438 D PFAM: small multidrug resistance protein; KEGG: sdy:SDY_1553 multidrug efflux system protein MdtJ; small multidrug resistance protein 2286073..2286438 Escherichia coli KO11FL 11777013 YP_005277858.1 CDS EKO11_2179 NC_016902.1 2286425 2286754 D PFAM: small multidrug resistance protein; KEGG: sbc:SbBS512_E1785 multidrug efflux system protein MdtI; small multidrug resistance protein 2286425..2286754 Escherichia coli KO11FL 11777014 YP_005277859.1 CDS EKO11_2180 NC_016902.1 2286793 2287614 R PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: sfv:SFV_1613 hypothetical protein; peptidase S1 and S6 chymotrypsin/Hap complement(2286793..2287614) Escherichia coli KO11FL 11777015 YP_005277860.1 CDS EKO11_2181 NC_016902.1 2287890 2288198 R PFAM: Acid shock repeat protein; KEGG: sdy:SDY_1556 acid shock protein precursor; Acid shock repeat protein complement(2287890..2288198) Escherichia coli KO11FL 11777016 YP_005277861.1 CDS EKO11_2182 NC_016902.1 2288622 2289875 R PFAM: major facilitator superfamily MFS_1; KEGG: ssn:SSON_1568 putative transport protein; major facilitator superfamily protein complement(2288622..2289875) Escherichia coli KO11FL 11779518 YP_005277862.1 CDS EKO11_2183 NC_016902.1 2289982 2290875 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eok:G2583_1989 putative transcriptional regulator LysR-type; LysR family transcriptional regulator 2289982..2290875 Escherichia coli KO11FL 11777017 YP_005277863.1 CDS EKO11_2184 NC_016902.1 2291010 2292230 D PFAM: ROK family protein; KEGG: eok:G2583_1988 putative NAGC-like transcriptional regulator; ROK family protein 2291010..2292230 Escherichia coli KO11FL 11777018 YP_005277864.1 CDS EKO11_2185 NC_016902.1 2292355 2293050 D TIGRFAM: dethiobiotin synthase; KEGG: ebd:ECBD_2053 putative dithiobiotin synthetase; dethiobiotin synthase 2292355..2293050 Escherichia coli KO11FL 11779519 YP_005277865.1 CDS EKO11_2186 NC_016902.1 2293003 2294319 R KEGG: sfv:SFV_1607 putative voltage-gated ClC-type chloride channel ClcB; manually curated; PFAM: Cl- channel voltage-gated family protein; Cl- channel voltage-gated family protein complement(2293003..2294319) Escherichia coli KO11FL 11777019 YP_005277866.1 CDS EKO11_2187 NC_016902.1 2294454 2295068 R KEGG: ssn:SSON_1573 twin-argninine leader-binding protein DmsD; twin-argninine leader-binding protein DmsD complement(2294454..2295068) Escherichia coli KO11FL 11777020 YP_005277867.1 CDS EKO11_2188 NC_016902.1 2295111 2295965 R PFAM: DMSO reductase anchor subunit (DmsC); KEGG: ebd:ECBD_2056 DMSO reductase anchor subunit (DmsC); DMSO reductase anchor subunit DmsC complement(2295111..2295965) Escherichia coli KO11FL 11777021 YP_005277868.1 CDS EKO11_2189 NC_016902.1 2295967 2296584 R TIGRFAM: dimethylsulfoxide reductase, chain B; KEGG: sdy:SDY_1567 putative oxidoreductase, Fe-S subunit; dimethylsulfoxide reductase subunit B complement(2295967..2296584) Escherichia coli KO11FL 11777022 YP_005277869.1 CDS EKO11_2190 NC_016902.1 2296595 2298991 R KEGG: ebd:ECBD_2058 anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; anaerobic dimethyl sulfoxide reductase subunit A complement(2296595..2298991) Escherichia coli KO11FL 11779520 YP_005277870.1 CDS EKO11_2191 NC_016902.1 2299079 2301505 R KEGG: eoh:ECO103_1726 oxidoreductase subunit; TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; anaerobic dimethyl sulfoxide reductase subunit A complement(2299079..2301505) Escherichia coli KO11FL 11777023 YP_005277871.1 CDS EKO11_2192 NC_016902.1 2301704 2302009 R PFAM: protein of unknown function DUF1161; KEGG: eoh:ECO103_1725 hypothetical protein; hypothetical protein complement(2301704..2302009) Escherichia coli KO11FL 11777024 YP_005277872.1 CDS EKO11_2193 NC_016902.1 2302081 2302827 D PFAM: protein of unknown function UPF0257; KEGG: sbc:SbBS512_E1771 hypothetical protein; hypothetical protein 2302081..2302827 Escherichia coli KO11FL 11779521 YP_005277873.1 CDS EKO11_2194 NC_016902.1 2302830 2303390 R KEGG: ebd:ECBD_2062 diamine N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; Diamine N-acetyltransferase complement(2302830..2303390) Escherichia coli KO11FL 11777025 YP_005277874.1 CDS EKO11_2195 NC_016902.1 2303425 2303766 R PFAM: protein of unknown function DUF1283; KEGG: sfv:SFV_1561 hypothetical protein; hypothetical protein complement(2303425..2303766) Escherichia coli KO11FL 11777026 YP_005277875.1 CDS EKO11_2196 NC_016902.1 2303901 2304227 D PFAM: protein of unknown function UPF0060; KEGG: ebd:ECBD_2064 hypothetical protein; hypothetical protein 2303901..2304227 Escherichia coli KO11FL 11777027 YP_005277876.1 CDS EKO11_2197 NC_016902.1 2304433 2305647 D PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ebd:ECBD_2065 mandelate racemase/muconate lactonizing protein; mandelate racemase/muconate lactonizing protein 2304433..2305647 Escherichia coli KO11FL 11777028 YP_005277877.1 CDS EKO11_2198 NC_016902.1 2305659 2306678 D PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: eoi:ECO111_2047 putative dehydrogenase; alcohol dehydrogenase GroES domain-containing protein 2305659..2306678 Escherichia coli KO11FL 11777029 YP_005277878.1 CDS EKO11_2199 NC_016902.1 2306736 2306846 D KEGG: eok:G2583_1973 inner membrane metabolite transport protein YdfJ; inner membrane metabolite transport protein YdfJ 2306736..2306846 Escherichia coli KO11FL 11777030 YP_005277879.1 CDS EKO11_2200 NC_016902.1 2306866 2308146 R PFAM: integrase family protein; KEGG: eoi:ECO111_2046 putative integrase; integrase family protein complement(2306866..2308146) Escherichia coli KO11FL 11777031 YP_005277880.1 CDS EKO11_2201 NC_016902.1 2308181 2308417 R PFAM: protein of unknown function DUF1233 excisionase; KEGG: ebr:ECB_01546 excisionase; hypothetical protein complement(2308181..2308417) Escherichia coli KO11FL 11777032 YP_005277881.1 CDS EKO11_2202 NC_016902.1 2308505 2310982 R PFAM: Exonuclease RNase T and DNA polymerase III; KEGG: eoj:ECO26_2208 putative exonuclease; Exonuclease RNase T and DNA polymerase III complement(2308505..2310982) Escherichia coli KO11FL 11777033 YP_005277882.1 CDS EKO11_2203 NC_016902.1 2311075 2311266 R PFAM: protein of unknown function DUF1482; KEGG: ebw:BWG_1393 Qin prophage; hypothetical protein; hypothetical protein complement(2311075..2311266) Escherichia coli KO11FL 11779522 YP_005277883.1 CDS EKO11_2204 NC_016902.1 2311263 2311451 R PFAM: DicB family protein; KEGG: eoi:ECO111_2042 putative cell division inhibition protein DicB; DicB family protein complement(2311263..2311451) Escherichia coli KO11FL 11777034 YP_005277884.1 CDS EKO11_2205 NC_016902.1 2311722 2312015 D manually curated; KEGG: etw:ECSP_1720 hypothetical protein; hypothetical protein 2311722..2312015 Escherichia coli KO11FL 11777035 YP_005277885.1 CDS EKO11_2206 NC_016902.1 2312019 2312237 R KEGG: eoi:ECO111_1407 hypothetical protein; hypothetical protein complement(2312019..2312237) Escherichia coli KO11FL 11777036 YP_005277886.1 CDS EKO11_2207 NC_016902.1 2312267 2312395 R KEGG: ebw:BWG_1391 Qin prophage; hypothetical protein; putative Qin prophage protein complement(2312267..2312395) Escherichia coli KO11FL 11779523 YP_005277887.1 CDS EKO11_2208 NC_016902.1 2312397 2312552 R PFAM: protein of unknown function DUF1391; KEGG: eoh:ECO103_2282 hypothetical protein; hypothetical protein complement(2312397..2312552) Escherichia coli KO11FL 11777037 YP_005277888.1 CDS EKO11_2209 NC_016902.1 2312719 2313126 R KEGG: ebw:BWG_1389 transcriptional repressor DicA; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein complement(2312719..2313126) Escherichia coli KO11FL 11777038 YP_005277889.1 CDS EKO11_2210 NC_016902.1 2313210 2313440 D KEGG: ebw:BWG_1388 DNA-binding transcriptional regulator DicC; DNA-binding transcriptional regulator DicC 2313210..2313440 Escherichia coli KO11FL 11779524 YP_005277890.1 CDS EKO11_2211 NC_016902.1 2313424 2313945 D PFAM: protein of unknown function DUF1019; KEGG: eoj:ECO26_2201 putative phage regulatory protein CII; hypothetical protein 2313424..2313945 Escherichia coli KO11FL 11777039 YP_005277891.1 CDS EKO11_2212 NC_016902.1 2313926 2314891 D KEGG: eok:G2583_2473 phage O protein family; phage O protein family 2313926..2314891 Escherichia coli KO11FL 11777040 YP_005277892.1 CDS EKO11_2213 NC_016902.1 2314932 2315354 D PFAM: protein of unknown function DUF977; KEGG: ebr:ECB_01535 hypothetical protein; hypothetical protein 2314932..2315354 Escherichia coli KO11FL 11779525 YP_005277893.1 CDS EKO11_2217 NC_016902.1 2316860 2317039 D KEGG: sbo:SBO_0964 hypothetical protein; hypothetical protein 2316860..2317039 Escherichia coli KO11FL 11777044 YP_005277894.1 CDS EKO11_2218 NC_016902.1 2317014 2317196 R KEGG: sty:STY2055 hypothetical protein; hypothetical protein complement(2317014..2317196) Escherichia coli KO11FL 11777045 YP_005277895.1 CDS EKO11_2219 NC_016902.1 2317374 2318687 D PFAM: Integrase catalytic region; KEGG: enc:ECL_A109 putative transposase; integrase catalytic subunit 2317374..2318687 Escherichia coli KO11FL 11777046 YP_005277896.1 CDS EKO11_2220 NC_016902.1 2319124 2319456 R KEGG: ebw:BWG_1385 Qin prophage; hypothetical protein; putative Qin prophage protein complement(2319124..2319456) Escherichia coli KO11FL 11777047 YP_005277897.1 CDS EKO11_2221 NC_016902.1 2319659 2319964 R manually curated; KEGG: ebw:BWG_1384 Qin prophage; hypothetical protein; putative Qin prophage protein complement(2319659..2319964) Escherichia coli KO11FL 11777048 YP_005277898.1 CDS EKO11_2222 NC_016902.1 2319989 2320228 D KEGG: ent:Ent638_4262 bifunctional antitoxin/transcriptional repressor RelB; TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; RelB/DinJ family addiction module antitoxin 2319989..2320228 Escherichia coli KO11FL 11777049 YP_005277899.1 CDS EKO11_2223 NC_016902.1 2320228 2320515 D KEGG: sfx:S1669 hypothetical protein; TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; RelE/StbE family addiction module toxin 2320228..2320515 Escherichia coli KO11FL 11777050 YP_005277900.1 CDS EKO11_2225 NC_016902.1 2320959 2321210 D KEGG: eoj:ECO26_2192 hypothetical protein; hypothetical protein 2320959..2321210 Escherichia coli KO11FL 11777052 YP_005277901.1 CDS EKO11_2226 NC_016902.1 2321557 2322606 D SMART: HNH nuclease; KEGG: eoj:ECO26_2191 hypothetical protein; HNH nuclease 2321557..2322606 Escherichia coli KO11FL 11777053 YP_005277902.1 CDS EKO11_2227 NC_016902.1 2322620 2323372 D PFAM: antitermination protein; KEGG: ebw:BWG_1378 Qin prophage; putative antitermination protein Q; antitermination protein 2322620..2323372 Escherichia coli KO11FL 11777054 YP_005277903.1 CDS EKO11_2228 NC_016902.1 2323794 2324006 R KEGG: efe:EFER_4435 cold shock protein; Qin prophage; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock protein complement(2323794..2324006) Escherichia coli KO11FL 11777055 YP_005277904.1 CDS EKO11_2229 NC_016902.1 2324307 2324522 D KEGG: ebw:BWG_1376 Qin prophage; cold shock protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock protein 2324307..2324522 Escherichia coli KO11FL 11777056 YP_005277905.1 CDS EKO11_2230 NC_016902.1 2325124 2325243 R hypothetical protein complement(2325124..2325243) Escherichia coli KO11FL 11779526 YP_005277906.1 CDS EKO11_2231 NC_016902.1 2325285 2325491 D PFAM: Lysis S family protein; KEGG: eoj:ECO26_2187 putative holin protein; Lysis S family protein 2325285..2325491 Escherichia coli KO11FL 11777057 YP_005277907.1 CDS EKO11_2232 NC_016902.1 2325496 2325807 D PFAM: protein of unknown function DUF1327; KEGG: ebw:BWG_1374 Qin prophage; hypothetical protein; hypothetical protein 2325496..2325807 Escherichia coli KO11FL 11777058 YP_005277908.1 CDS EKO11_2233 NC_016902.1 2325804 2326337 D KEGG: eoj:ECO26_2185 putative endolysin; PFAM: glycoside hydrolase family 24; lysozyme 2325804..2326337 Escherichia coli KO11FL 11779527 YP_005277909.1 CDS EKO11_2234 NC_016902.1 2326334 2326831 D PFAM: Protein of unknown function DUF2514; KEGG: eoj:ECO26_2184 hypothetical protein; hypothetical protein 2326334..2326831 Escherichia coli KO11FL 11777059 YP_005277910.1 CDS EKO11_2235 NC_016902.1 2327014 2327172 D manually curated; KEGG: apo:Arcpr_0966 hypothetical protein; hypothetical protein 2327014..2327172 Escherichia coli KO11FL 11777060 YP_005277911.1 CDS EKO11_2236 NC_016902.1 2327194 2327406 D KEGG: efe:EFER_4442 cold shock protein; Qin prophage; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock protein 2327194..2327406 Escherichia coli KO11FL 11777061 YP_005277912.1 CDS EKO11_2238 NC_016902.1 2327678 2327908 D manually curated; KEGG: eok:G2583_5204 hypothetical protein; hypothetical protein 2327678..2327908 Escherichia coli KO11FL 11777063 YP_005277913.1 CDS EKO11_2239 NC_016902.1 2328080 2328253 D PFAM: GnsAGnsB family protein; KEGG: eoj:ECO26_2181 hypothetical protein; GnsAGnsB family protein 2328080..2328253 Escherichia coli KO11FL 11777064 YP_005277914.1 CDS EKO11_2240 NC_016902.1 2328405 2328815 R PFAM: protein of unknown function DUF1398; KEGG: ebw:BWG_1368 Qin prophage; hypothetical protein; hypothetical protein complement(2328405..2328815) Escherichia coli KO11FL 11777065 YP_005277915.1 CDS EKO11_2241 NC_016902.1 2329495 2330040 D PFAM: DNA packaging Nu1; KEGG: ssn:SSON_2431 bacteriophage DNA packaging protein; DNA packaging Nu1 2329495..2330040 Escherichia coli KO11FL 11777066 YP_005277916.1 CDS EKO11_2242 NC_016902.1 2330015 2331982 D PFAM: terminase GpA; KEGG: eoj:ECO26_0602 putative terminase large subunit; terminase GpA 2330015..2331982 Escherichia coli KO11FL 11777067 YP_005277917.1 CDS EKO11_2243 NC_016902.1 2331936 2332142 D PFAM: Head-to-tail joining protein W gpW family protein; KEGG: ssn:SSON_2429 putative head-tail joining protein of prophage; Head-to-tail joining protein W gpW family protein 2331936..2332142 Escherichia coli KO11FL 11777068 YP_005277918.1 CDS EKO11_2244 NC_016902.1 2332139 2333740 D KEGG: ssn:SSON_2428 putative capsid structural protein of prophage; TIGRFAM: phage portal protein, lambda family; PFAM: portal protein lambda; phage portal protein, lambda family 2332139..2333740 Escherichia coli KO11FL 11777069 YP_005277919.1 CDS EKO11_2245 NC_016902.1 2333721 2335040 D PFAM: peptidase S49; KEGG: eoh:ECO103_0541 putative head protein/prohead protease; peptidase S49 2333721..2335040 Escherichia coli KO11FL 11777070 YP_005277920.1 CDS EKO11_2246 NC_016902.1 2335050 2335382 D PFAM: lambda head decoration protein D HDPD; KEGG: eoj:ECO26_2239 putative head-DNA stabilization protein; lambda head decoration protein D HDPD 2335050..2335382 Escherichia coli KO11FL 11777071 YP_005277921.1 CDS EKO11_2247 NC_016902.1 2335438 2336463 D KEGG: ebd:ECBD_2868 major capsid protein E; major capsid protein E 2335438..2336463 Escherichia coli KO11FL 11779528 YP_005277922.1 CDS EKO11_2248 NC_016902.1 2336505 2336903 D KEGG: eoh:ECO103_0544 putative DNA packaging protein; putative DNA packaging protein 2336505..2336903 Escherichia coli KO11FL 11777072 YP_005277923.1 CDS EKO11_2249 NC_016902.1 2336915 2337268 D PFAM: head-tail attachment protein; KEGG: ssn:SSON_2423 putative head-tail joining protein of prophage; head-tail attachment protein 2336915..2337268 Escherichia coli KO11FL 11777073 YP_005277924.1 CDS EKO11_2250 NC_016902.1 2337280 2337858 D PFAM: Prophage minor tail Z family protein; KEGG: ebd:ECBD_2865 prophage minor tail Z family protein; prophage minor tail Z family protein 2337280..2337858 Escherichia coli KO11FL 11777074 YP_005277925.1 CDS EKO11_2251 NC_016902.1 2337855 2338250 D PFAM: minor tail U; KEGG: ebd:ECBD_2864 minor tail U; minor tail family protein 2337855..2338250 Escherichia coli KO11FL 11777075 YP_005277926.1 CDS EKO11_2252 NC_016902.1 2338258 2338998 D KEGG: ebd:ECBD_2863 Ig domain protein group 2 domain protein; PFAM: Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein; Ig domain-containing protein group 2 domain-containing protein 2338258..2338998 Escherichia coli KO11FL 11777076 YP_005277927.1 CDS EKO11_2253 NC_016902.1 2339014 2339436 D KEGG: ebd:ECBD_2862 phage minor tail protein G; TIGRFAM: phage minor tail protein G; PFAM: minor tail protein G; phage minor tail protein G 2339014..2339436 Escherichia coli KO11FL 11777077 YP_005277928.1 CDS EKO11_2254 NC_016902.1 2339418 2339852 D KEGG: ebd:ECBD_2861 phage tail assembly protein T; TIGRFAM: phage tail assembly protein T; PFAM: Minor tail T family protein; phage tail assembly protein T 2339418..2339852 Escherichia coli KO11FL 11777078 YP_005277929.1 CDS EKO11_2255 NC_016902.1 2339845 2342406 D KEGG: eoj:ECO26_0619 putative tail length tape measure protein; TIGRFAM: phage tail tape measure protein, lambda family; PFAM: Prophage tail length tape measure; phage tail tape measure protein, lambda family 2339845..2342406 Escherichia coli KO11FL 11779529 YP_005277930.1 CDS EKO11_2256 NC_016902.1 2342403 2342732 D PFAM: minor tail family protein; KEGG: ebd:ECBD_2859 minor tail family protein; minor tail family protein 2342403..2342732 Escherichia coli KO11FL 11777079 YP_005277931.1 CDS EKO11_2257 NC_016902.1 2342732 2343430 D KEGG: eok:G2583_1922 minor tail protein; TIGRFAM: phage minor tail protein L; PFAM: minor tail protein L; phage minor tail protein L 2342732..2343430 Escherichia coli KO11FL 11777080 YP_005277932.1 CDS EKO11_2258 NC_016902.1 2343436 2344179 D PFAM: NLP/P60 protein; KEGG: eok:G2583_5225 putative tail fiber component K of prophage; NLP/P60 protein 2343436..2344179 Escherichia coli KO11FL 11777081 YP_005277933.1 CDS EKO11_2259 NC_016902.1 2344176 2344748 D PFAM: lambda tail assembly I; KEGG: eoj:ECO26_3159 putative tail assembly protein; lambda tail assembly I 2344176..2344748 Escherichia coli KO11FL 11777082 YP_005277934.1 CDS EKO11_2260 NC_016902.1 2344809 2348222 D KEGG: etw:ECSP_0861 putative tail component of prophage CP-933K; PFAM: protein of unknown function DUF1983; Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; hypothetical protein 2344809..2348222 Escherichia coli KO11FL 11777083 YP_005277935.1 CDS EKO11_2261 NC_016902.1 2348293 2348892 D PFAM: virulence-related outer membrane protein; KEGG: eok:G2583_5229 hypothetical protein; virulence-related outer membrane protein 2348293..2348892 Escherichia coli KO11FL 11777084 YP_005277936.1 CDS EKO11_2262 NC_016902.1 2348957 2352031 D PFAM: Prophage tail fibre domain protein; tail fiber repeat 2 protein; Tail Collar domain protein; KEGG: ssn:SSON_2410 phage protein-related; Prophage tail fiber domain protein 2348957..2352031 Escherichia coli KO11FL 11777085 YP_005277937.1 CDS EKO11_2263 NC_016902.1 2352031 2352606 D PFAM: tail assembly chaperone gp38; KEGG: ebw:BWG_1365 Qin prophage; putative tail fibre assembly protein; tail assembly chaperone gp38 2352031..2352606 Escherichia coli KO11FL 11777086 YP_005277938.1 CDS EKO11_2264 NC_016902.1 2352704 2353294 R PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: ebw:BWG_1364 Qin prophage; putative site-specific recombinase; Resolvase domain-containing protein complement(2352704..2353294) Escherichia coli KO11FL 11777087 YP_005277939.1 CDS EKO11_2265 NC_016902.1 2353611 2353844 R KEGG: ebd:ECBD_2249 uncharacterized protein YdfK; hypothetical protein complement(2353611..2353844) Escherichia coli KO11FL 11777088 YP_005277940.1 CDS EKO11_2266 NC_016902.1 2354631 2355914 D KEGG: ebd:ECBD_2096 metabolite/H+ symporter, major facilitator superfamily (MFS); TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: major facilitator superfamily MFS_1; metabolite/H+ symporter, major facilitator superfamily (MFS) 2354631..2355914 Escherichia coli KO11FL 11777089 YP_005277941.1 CDS EKO11_2267 NC_016902.1 2356003 2357463 D PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: sfx:S1678 putative oxidoreductase; mannitol dehydrogenase domain-containing protein 2356003..2357463 Escherichia coli KO11FL 11777090 YP_005277942.1 CDS EKO11_2268 NC_016902.1 2357499 2357702 R TIGRFAM: selenium-binding protein YdfZ; KEGG: sdy:SDY_1584 hypothetical protein; selenium-binding protein YdfZ complement(2357499..2357702) Escherichia coli KO11FL 11777091 YP_005277943.1 CDS EKO11_2269 NC_016902.1 2357880 2358566 R KEGG: ssn:SSON_1588 hypothetical protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator complement(2357880..2358566) Escherichia coli KO11FL 11779530 YP_005277944.1 CDS EKO11_2270 NC_016902.1 2358655 2359401 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sbo:SBO_1613 3-hydroxy acid dehydrogenase; short-chain dehydrogenase/reductase SDR complement(2358655..2359401) Escherichia coli KO11FL 11779531 YP_005277945.1 CDS EKO11_2271 NC_016902.1 2359538 2361583 D KEGG: ssn:SSON_1590 dipeptidyl carboxypeptidase II; PFAM: peptidase M3A and M3B thimet/oligopeptidase F; peptidyl-dipeptidase Dcp 2359538..2361583 Escherichia coli KO11FL 11777092 YP_005277946.1 CDS EKO11_2272 NC_016902.1 2361628 2362146 R PFAM: CinA domain protein; KEGG: eoi:ECO111_1940 competence damage-inducible protein A; CinA domain-containing protein complement(2361628..2362146) Escherichia coli KO11FL 11777093 YP_005277947.1 CDS EKO11_2273 NC_016902.1 2362422 2362814 D PFAM: protein of unknown function DUF388, OB-fold; KEGG: ebw:BWG_1356 hypothetical protein; hypothetical protein 2362422..2362814 Escherichia coli KO11FL 11777094 YP_005277948.1 CDS EKO11_2274 NC_016902.1 2363069 2363959 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: ebw:BWG_1355 hypothetical protein; SMART: GGDEF domain containing protein; diguanylate cyclase 2363069..2363959 Escherichia coli KO11FL 11777095 YP_005277949.1 CDS EKO11_2275 NC_016902.1 2364178 2364273 R KEGG: ebd:ECBD_2105 hypothetical protein; hypothetical protein complement(2364178..2364273) Escherichia coli KO11FL 11779532 YP_005277950.1 CDS EKO11_2276 NC_016902.1 2364400 2365587 R PFAM: major facilitator superfamily MFS_1; KEGG: eoj:ECO26_2142 putative MFS-type transporter YdeE; major facilitator superfamily protein complement(2364400..2365587) Escherichia coli KO11FL 11777096 YP_005277951.1 CDS EKO11_2277 NC_016902.1 2365782 2366681 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: eoi:ECO111_1936 O-acetylserine/cysteine export protein; hypothetical protein 2365782..2366681 Escherichia coli KO11FL 11777097 YP_005277952.1 CDS EKO11_2278 NC_016902.1 2366726 2367424 R KEGG: eoh:ECO103_1670 putative transcriptional regulator; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator complement(2366726..2367424) Escherichia coli KO11FL 11777098 YP_005277953.1 CDS EKO11_2279 NC_016902.1 2367623 2367934 D PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: eoh:ECO103_1669 putative PTS system component, lactose/cellobiose specific IIB protein; PTS system lactose/cellobiose-specific transporter subunit IIB 2367623..2367934 Escherichia coli KO11FL 11777099 YP_005277954.1 CDS EKO11_2280 NC_016902.1 2368049 2369371 D TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; KEGG: eoi:ECO111_1933 putative PTS system, cellobiose-specific IIC component; PFAM: phosphotransferase system EIIC; PTS system lactose/cellobiose family transporter subunit IIC 2368049..2369371 Escherichia coli KO11FL 11777100 YP_005277955.1 CDS EKO11_2281 NC_016902.1 2369399 2369710 D PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: eoh:ECO103_1666 putative PTS system component, lactose/cellobiose specific IIA protein; phosphotransferase system PTS lactose/cellobiose-specific IIA subunit 2369399..2369710 Escherichia coli KO11FL 11777101 YP_005277956.1 CDS EKO11_2282 NC_016902.1 2369766 2371439 D PFAM: porin LamB type; KEGG: eoh:ECO103_1665 putative outer membrane protein; LamB type porin 2369766..2371439 Escherichia coli KO11FL 11777102 YP_005277957.1 CDS EKO11_2283 NC_016902.1 2371464 2372903 D PFAM: glycoside hydrolase family 1; KEGG: ssn:SSON_1595 6-phospho-beta-glucosidase; glycoside hydrolase 2371464..2372903 Escherichia coli KO11FL 11777103 YP_005277958.1 CDS EKO11_2284 NC_016902.1 2372960 2373178 R KEGG: sbo:SBO_1650 hypothetical protein; hypothetical protein complement(2372960..2373178) Escherichia coli KO11FL 11777104 YP_005277959.1 CDS EKO11_2285 NC_016902.1 2373210 2373593 R KEGG: sbc:SbBS512_E1674 DNA-binding transcriptional activator MarA; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(2373210..2373593) Escherichia coli KO11FL 11777105 YP_005277960.1 CDS EKO11_2286 NC_016902.1 2373613 2374047 R KEGG: sdy:SDY_1597 DNA-binding transcriptional repressor MarR; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; MarR family transcriptional regulator complement(2373613..2374047) Escherichia coli KO11FL 11777106 YP_005277961.1 CDS EKO11_2287 NC_016902.1 2374259 2374924 D PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: sdy:SDY_1598 multiple drug resistance protein MarC; multiple antibiotic resistance (MarC)-like protein 2374259..2374924 Escherichia coli KO11FL 11777107 YP_005277962.1 CDS EKO11_2288 NC_016902.1 2374949 2376139 R PFAM: major facilitator superfamily MFS_1; KEGG: sbo:SBO_1646 sugar efflux transporter; major facilitator superfamily protein complement(2374949..2376139) Escherichia coli KO11FL 11777108 YP_005277963.1 CDS EKO11_2290 NC_016902.1 2377481 2378362 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eoi:ECO111_1922 putative DNA-binding transcriptional regulator, LysR-type; LysR family transcriptional regulator complement(2377481..2378362) Escherichia coli KO11FL 11777110 YP_005277964.1 CDS EKO11_2291 NC_016902.1 2378463 2379851 D PFAM: Aldehyde Dehydrogenase; KEGG: sbc:SbBS512_E1681 putative succinate semialdehyde dehydrogenase; Aldehyde Dehydrogenase 2378463..2379851 Escherichia coli KO11FL 11777111 YP_005277965.1 CDS EKO11_2292 NC_016902.1 2379915 2380841 D TIGRFAM: Glutaminase, core; KEGG: sbc:SbBS512_E1682 glutaminase; PFAM: Glutaminase, core; glutaminase 2379915..2380841 Escherichia coli KO11FL 11777112 YP_005277966.1 CDS EKO11_2293 NC_016902.1 2380841 2381200 D KEGG: sbc:SbBS512_E1683 hypothetical protein; hypothetical protein 2380841..2381200 Escherichia coli KO11FL 11779533 YP_005277967.1 CDS EKO11_2294 NC_016902.1 2381339 2382757 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: ebd:ECBD_2120 diguanylate cyclase; SMART: GGDEF domain containing protein; diguanylate cyclase 2381339..2382757 Escherichia coli KO11FL 11779534 YP_005277968.1 CDS EKO11_2295 NC_016902.1 2382984 2384435 D PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: sfx:S1699 altronate oxidoreductase; mannitol dehydrogenase domain-containing protein 2382984..2384435 Escherichia coli KO11FL 11777113 YP_005277969.1 CDS EKO11_2296 NC_016902.1 2384642 2385556 D manually curated; KEGG: ebw:BWG_1339 conserved inner membrane protein; hypothetical protein 2384642..2385556 Escherichia coli KO11FL 11777114 YP_005277970.1 CDS EKO11_2297 NC_016902.1 2385560 2386318 R KEGG: eoi:ECO111_1915 trans-aconitate 2-methyltransferase; PFAM: Methyltransferase type 11; Trans-aconitate 2-methyltransferase complement(2385560..2386318) Escherichia coli KO11FL 11777115 YP_005277971.1 CDS EKO11_2298 NC_016902.1 2386375 2386665 R PFAM: Antibiotic biosynthesis monooxygenase; KEGG: eoh:ECO103_1648 autoinducer-2 (AI-2) modifying protein LsrG; antibiotic biosynthesis monooxygenase complement(2386375..2386665) Escherichia coli KO11FL 11777116 YP_005277972.1 CDS EKO11_2299 NC_016902.1 2386689 2387564 R PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: eok:G2583_1882 hypothetical protein; deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase complement(2386689..2387564) Escherichia coli KO11FL 11779535 YP_005277973.1 CDS EKO11_2300 NC_016902.1 2387591 2388613 R KEGG: eoh:ECO103_1646 AI2 transporter protein LsrB, periplasmic-binding component of ABC superfamily; AI2 transporter protein LsrB, periplasmic-binding component of ABC superfamily complement(2387591..2388613) Escherichia coli KO11FL 11777117 YP_005277974.1 CDS EKO11_2301 NC_016902.1 2388625 2389617 R PFAM: inner-membrane translocator; KEGG: sfv:SFV_1570 putative transport system permease protein; inner-membrane translocator complement(2388625..2389617) Escherichia coli KO11FL 11777118 YP_005277975.1 CDS EKO11_2302 NC_016902.1 2389617 2390645 R PFAM: inner-membrane translocator; KEGG: eoh:ECO103_1644 AI2 transporter protein LsrC, membrane component of ABC superfamily; inner-membrane translocator complement(2389617..2390645) Escherichia coli KO11FL 11777119 YP_005277976.1 CDS EKO11_2303 NC_016902.1 2390639 2392174 R KEGG: eoh:ECO103_1643 fused AI2 transporter subunits of ABC superfamily: ATP-binding components; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(2390639..2392174) Escherichia coli KO11FL 11777120 YP_005277977.1 CDS EKO11_2304 NC_016902.1 2392423 2393376 D PFAM: sugar-binding domain-containing protein; KEGG: eoh:ECO103_1642 putative DNA-binding transcriptional regulator; DeoR family transcriptional regulator 2392423..2393376 Escherichia coli KO11FL 11777121 YP_005277978.1 CDS EKO11_2305 NC_016902.1 2393455 2395047 D PFAM: Carbohydrate kinase, FGGY-like; KEGG: eoh:ECO103_1641 autoinducer-2 (AI-2) kinase; Carbohydrate kinase, FGGY-like protein 2393455..2395047 Escherichia coli KO11FL 11777122 YP_005277979.1 CDS EKO11_2306 NC_016902.1 2395578 2400998 D KEGG: eoh:ECO103_1640 putative lipoprotein/autotransporter domain-containing protein; TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: Autotransporter beta- domain protein; Pertactin; outer membrane autotransporter barrel domain-containing protein 2395578..2400998 Escherichia coli KO11FL 11777123 YP_005277980.1 CDS EKO11_2307 NC_016902.1 2401026 2401118 D KEGG: ebd:ECBD_2129 hypothetical protein; hypothetical protein 2401026..2401118 Escherichia coli KO11FL 11777124 YP_005277981.1 CDS EKO11_2308 NC_016902.1 2401207 2401473 D KEGG: eok:G2583_1873 transcriptional regulator HipB; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 2401207..2401473 Escherichia coli KO11FL 11777125 YP_005277982.1 CDS EKO11_2309 NC_016902.1 2401473 2402795 D KEGG: eoi:ECO111_1899 regulator with HipB; TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein; HipA N-terminal domain-containing protein 2401473..2402795 Escherichia coli KO11FL 11777126 YP_005277983.1 CDS EKO11_2312 NC_016902.1 2403747 2404310 D PFAM: Fimbrial protein domain-containing protein; KEGG: eoi:ECO111_1897 putative type 1 fimbrial protein precursor; fimbrial protein domain-containing protein 2403747..2404310 Escherichia coli KO11FL 11777129 YP_005277984.1 CDS EKO11_2313 NC_016902.1 2404671 2405381 D PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: eoi:ECO111_1896 putative fimbrial chaperone protein precursor; Pili assembly chaperone, N-terminal protein 2404671..2405381 Escherichia coli KO11FL 11779536 YP_005277985.1 CDS EKO11_2314 NC_016902.1 2405423 2408074 D PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: eoj:ECO26_2103 outer membrane usher protein; fimbrial biogenesis outer membrane usher protein 2405423..2408074 Escherichia coli KO11FL 11779537 YP_005277986.1 CDS EKO11_2315 NC_016902.1 2408088 2408618 D PFAM: Fimbrial protein domain-containing protein; KEGG: eok:G2583_1867 biofilm-dependent modulation protein; fimbrial protein domain-containing protein 2408088..2408618 Escherichia coli KO11FL 11777130 YP_005277987.1 CDS EKO11_2316 NC_016902.1 2408631 2409134 D PFAM: Fimbrial protein domain-containing protein; KEGG: eok:G2583_1866 hypothetical protein; fimbrial protein domain-containing protein 2408631..2409134 Escherichia coli KO11FL 11777131 YP_005277988.1 CDS EKO11_2317 NC_016902.1 2409194 2410108 D PFAM: FimH mannose-binding protein; Fimbrial protein domain-containing protein; KEGG: ssn:SSON_1621 putative adhesin; FimH mannose-binding protein 2409194..2410108 Escherichia coli KO11FL 11779538 YP_005277989.1 CDS EKO11_2318 NC_016902.1 2410442 2412721 D KEGG: eoh:ECO103_1628 putative oxidoreductase; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; oxidoreductase alpha (molybdopterin) subunit 2410442..2412721 Escherichia coli KO11FL 11779539 YP_005277990.1 CDS EKO11_2319 NC_016902.1 2412969 2413166 D KEGG: sbo:SBO_1556 hypothetical protein; hypothetical protein 2412969..2413166 Escherichia coli KO11FL 11777132 YP_005277991.1 CDS EKO11_2320 NC_016902.1 2413241 2414002 D KEGG: sbc:SbBS512_E1762 transcriptional regulator YdeO; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 2413241..2414002 Escherichia coli KO11FL 11777133 YP_005277992.1 CDS EKO11_2321 NC_016902.1 2414404 2416086 D PFAM: sulfatase; KEGG: eoh:ECO103_1625 hypothetical protein; sulfatase 2414404..2416086 Escherichia coli KO11FL 11777134 YP_005277993.1 CDS EKO11_2322 NC_016902.1 2416138 2417295 D PFAM: Radical SAM domain protein; KEGG: eoh:ECO103_1624 hypothetical protein; radical SAM protein 2416138..2417295 Escherichia coli KO11FL 11777135 YP_005277994.1 CDS EKO11_2323 NC_016902.1 2417586 2419271 D manually curated; PFAM: ABC transporter related; ABC transporter domain-containing protein; KEGG: eoh:ECO103_1623 fused putative multidrug transporter subunits of ABC superfamily: membrane component/ATP-binding component; SMART: AAA ATPase; ABC transporter 2417586..2419271 Escherichia coli KO11FL 11777136 YP_005277995.1 CDS EKO11_2324 NC_016902.1 2419309 2421681 D PFAM: TonB-dependent receptor plug; KEGG: ebw:BWG_1316 putative porin protein; TonB-dependent receptor plug 2419309..2421681 Escherichia coli KO11FL 11777137 YP_005277996.1 CDS EKO11_2325 NC_016902.1 2421738 2424521 D PFAM: peptidase M16 domain protein; KEGG: eoi:ECO111_1884 putative peptidase; peptidase M16 domain-containing protein 2421738..2424521 Escherichia coli KO11FL 11777138 YP_005277997.1 CDS EKO11_2326 NC_016902.1 2424883 2426283 D TIGRFAM: glutamate decarboxylase; KEGG: sbo:SBO_1563 glutamate decarboxylase isozyme; PFAM: Pyridoxal-dependent decarboxylase; glutamate decarboxylase 2424883..2426283 Escherichia coli KO11FL 11777139 YP_005277998.1 CDS EKO11_2328 NC_016902.1 2426439 2427974 D KEGG: sbc:SbBS512_E1755 glutamate:gamma aminobutyrate antiporter; TIGRFAM: glutamate/g-aminobutyrate antiporter; PFAM: amino acid permease-associated region; glutamate/g-aminobutyrate antiporter 2426439..2427974 Escherichia coli KO11FL 11777141 YP_005277999.1 CDS EKO11_2329 NC_016902.1 2428105 2429424 D PFAM: protein of unknown function DUF187; KEGG: ssn:SSON_1633 hypothetical protein; hypothetical protein 2428105..2429424 Escherichia coli KO11FL 11777142 YP_005278000.1 CDS EKO11_2330 NC_016902.1 2429796 2431178 D TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: ebd:ECBD_2149 diguanylate cyclase; SMART: GGDEF domain containing protein; diguanylate cyclase 2429796..2431178 Escherichia coli KO11FL 11777143 YP_005278001.1 CDS EKO11_2331 NC_016902.1 2431203 2433602 D TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: eok:G2583_1852 FOG: PAS/PAC domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 2431203..2433602 Escherichia coli KO11FL 11777144 YP_005278002.1 CDS EKO11_2332 NC_016902.1 2433860 2434441 D KEGG: ssn:SSON_1636 D-alanyl-D-alanine dipeptidase; PFAM: peptidase M15D vanX D-ala-D-ala dipeptidase; D-Ala-D-Ala dipeptidase 2433860..2434441 Escherichia coli KO11FL 11777145 YP_005278003.1 CDS EKO11_2333 NC_016902.1 2434455 2436005 D PFAM: extracellular solute-binding protein family 5; KEGG: eoi:ECO111_1877 D-ala-D-ala transporter subunit DdpA; family 5 extracellular solute-binding protein 2434455..2436005 Escherichia coli KO11FL 11779540 YP_005278004.1 CDS EKO11_2334 NC_016902.1 2436007 2437029 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebw:BWG_1307 D-ala-D-ala transporter subunit; binding-protein-dependent transport system inner membrane protein 2436007..2437029 Escherichia coli KO11FL 11777146 YP_005278005.1 CDS EKO11_2335 NC_016902.1 2437026 2437922 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebd:ECBD_2154 ATP-dependent peptide transporter membrane subunit; binding-protein-dependent transport system inner membrane protein 2437026..2437922 Escherichia coli KO11FL 11777147 YP_005278006.1 CDS EKO11_2336 NC_016902.1 2437919 2438905 D TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: eok:G2583_1847 ABC transporter ATP-binding protein; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 2437919..2438905 Escherichia coli KO11FL 11777148 YP_005278007.1 CDS EKO11_2337 NC_016902.1 2438898 2439824 D TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: eoi:ECO111_1873 D-ala-D-ala transporter subunit DdpF; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 2438898..2439824 Escherichia coli KO11FL 11777149 YP_005278008.1 CDS EKO11_2338 NC_016902.1 2439880 2440311 R TIGRFAM: peroxiredoxin, OsmC subfamily; KEGG: sfv:SFV_1739 osmotically inducible protein; PFAM: OsmC family protein; OsmC subfamily peroxiredoxin complement(2439880..2440311) Escherichia coli KO11FL 11777150 YP_005278009.1 CDS EKO11_2339 NC_016902.1 2440594 2440872 D KEGG: sbc:SbBS512_E1744 biofilm-dependent modulation protein; manually curated; PFAM: Biofilm-dependent modulation protein Bdm, putative; Biofilm-dependent modulation protein Bdm, putative 2440594..2440872 Escherichia coli KO11FL 11777151 YP_005278010.1 CDS EKO11_2340 NC_016902.1 2440974 2441111 D PFAM: 30S ribosomal subunit S22; KEGG: sbc:SbBS512_E1743 30S ribosomal subunit S22; 30S ribosomal subunit S22 2440974..2441111 Escherichia coli KO11FL 11777152 YP_005278011.1 CDS EKO11_2341 NC_016902.1 2441268 2442965 D PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: sfv:SFV_1742 malate dehydrogenase; malic protein NAD-binding protein 2441268..2442965 Escherichia coli KO11FL 11777153 YP_005278012.1 CDS EKO11_2342 NC_016902.1 2443099 2444109 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: eok:G2583_1841 Zn-dependent alcohol dehydrogenase; alcohol dehydrogenase 2443099..2444109 Escherichia coli KO11FL 11777154 YP_005278013.1 CDS EKO11_2343 NC_016902.1 2444256 2444540 D TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: sbc:SbBS512_E1740 addiction module antidote protein, HigA family; SMART: helix-turn-helix domain protein; plasmid maintenance system antidote protein 2444256..2444540 Escherichia coli KO11FL 11777155 YP_005278014.1 CDS EKO11_2344 NC_016902.1 2444591 2445244 R TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: sbc:SbBS512_E1739 formate dehydrogenase-N subunit gamma; formate dehydrogenase subunit gamma complement(2444591..2445244) Escherichia coli KO11FL 11777156 YP_005278015.1 CDS EKO11_2345 NC_016902.1 2445237 2446121 R KEGG: sbo:SBO_1582 formate dehydrogenase N, nitrate-inducible, iron-sulfur beta subunit; TIGRFAM: formate dehydrogenase, beta subunit; PFAM: Formate dehydrogenase transmembrane domain protein; formate dehydrogenase subunit beta complement(2445237..2446121) Escherichia coli KO11FL 11777157 YP_005278016.1 CDS EKO11_2346 NC_016902.1 2446134 2448545 R TIGRFAM: formate dehydrogenase, alpha subunit; KEGG: ssn:SSON_1650 formate dehydrogenase-N, nitrate-inducible, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; formate dehydrogenase subunit alpha complement(2446134..2448545) Escherichia coli KO11FL 11777158 YP_005278017.1 CDS EKO11_2347 NC_016902.1 2448594 2449181 R PFAM: molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; KEGG: sbo:SBO_1583 formate dehydrogenase N, nitrate-inducible, alpha subunit; molybdopterin oxidoreductase Fe4S4 region complement(2448594..2449181) Escherichia coli KO11FL 11777159 YP_005278018.1 CDS EKO11_2348 NC_016902.1 2449413 2450294 D KEGG: eok:G2583_1836 hypothetical protein; manually curated; PFAM: protein of unknown function DUF6 transmembrane; hypothetical protein 2449413..2450294 Escherichia coli KO11FL 11777160 YP_005278019.1 CDS EKO11_2349 NC_016902.1 2450553 2450843 D PFAM: porin Gram-negative type; KEGG: sbo:SBO_1585 putative outer membrane porin protein; porin 2450553..2450843 Escherichia coli KO11FL 11777161 YP_005278020.1 CDS EKO11_2350 NC_016902.1 2450902 2452197 D KEGG: eoi:ECO111_1861 T3SS effector-like protein EspR-homolog; leucine-rich repeat protein 2450902..2452197 Escherichia coli KO11FL 11777162 YP_005278021.1 CDS EKO11_2351 NC_016902.1 2452521 2453909 D KEGG: eoi:ECO111_1860 nitrate/nitrite transporter NarU; TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1; nitrite transporter 2452521..2453909 Escherichia coli KO11FL 11777163 YP_005278022.1 CDS EKO11_2352 NC_016902.1 2453991 2457731 D TIGRFAM: nitrate reductase, alpha subunit; KEGG: eoh:ECO103_1598 nitrate reductase 2, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; nitrate reductase subunit alpha 2453991..2457731 Escherichia coli KO11FL 11777164 YP_005278023.1 CDS EKO11_2353 NC_016902.1 2457728 2459272 D TIGRFAM: nitrate reductase, beta subunit; KEGG: eoi:ECO111_1858 nitrate reductase 2, beta subunit; nitrate reductase subunit beta 2457728..2459272 Escherichia coli KO11FL 11777165 YP_005278024.1 CDS EKO11_2354 NC_016902.1 2459272 2459967 D TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; KEGG: ssn:SSON_1659 cryptic nitrate reductase 2, delta subunit, assembly function; PFAM: TorD-like chaperone; nitrate reductase molybdenum cofactor assembly chaperone 2459272..2459967 Escherichia coli KO11FL 11777166 YP_005278025.1 CDS EKO11_2355 NC_016902.1 2459964 2460644 D TIGRFAM: respiratory nitrate reductase, gamma subunit; KEGG: sdy:SDY_1653 cryptic nitrate reductase 2, gamma subunit; PFAM: Nitrate reductase gamma subunit; respiratory nitrate reductase subunit gamma 2459964..2460644 Escherichia coli KO11FL 11777167 YP_005278026.1 CDS EKO11_2356 NC_016902.1 2460723 2461616 D KEGG: eoh:ECO103_1594 hypothetical protein; TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; phenazine biosynthesis protein PhzF family protein 2460723..2461616 Escherichia coli KO11FL 11779541 YP_005278027.1 CDS EKO11_2357 NC_016902.1 2461712 2462557 R KEGG: eoi:ECO111_1854 N-hydroxyarylamine O-acetyltransferase; PFAM: N-acetyltransferase; N-hydroxyarylamine O-acetyltransferase complement(2461712..2462557) Escherichia coli KO11FL 11777168 YP_005278028.1 CDS EKO11_2358 NC_016902.1 2462730 2463299 D PFAM: flavin reductase domain protein FMN-binding; KEGG: ebd:ECBD_2176 flavin reductase domain protein FMN-binding; flavin reductase domain-containing FMN-binding protein 2462730..2463299 Escherichia coli KO11FL 11777169 YP_005278029.1 CDS EKO11_2359 NC_016902.1 2463303 2463530 R PFAM: 4-oxalocrotonate tautomerase; KEGG: ebd:ECBD_2177 4-oxalocrotonate tautomerase; 4-oxalocrotonate tautomerase complement(2463303..2463530) Escherichia coli KO11FL 11777170 YP_005278030.1 CDS EKO11_2361 NC_016902.1 2465273 2465668 R KEGG: eok:G2583_1820 DsORF-e4; hypothetical protein complement(2465273..2465668) Escherichia coli KO11FL 11779542 YP_005278031.1 CDS EKO11_2362 NC_016902.1 2465680 2469888 R KEGG: eoi:ECO111_1849 RhsE core protein with extension; TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein; YD repeat protein complement(2465680..2469888) Escherichia coli KO11FL 11777172 YP_005278032.1 CDS EKO11_2363 NC_016902.1 2469956 2472064 R TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; KEGG: ssn:SSON_1677 rhs element protein; ImpA family type VI secretion-associated protein complement(2469956..2472064) Escherichia coli KO11FL 11777173 YP_005278033.1 CDS EKO11_2364 NC_016902.1 2472881 2473093 R KEGG: eoi:ECO111_1847 hypothetical protein; hypothetical protein complement(2472881..2473093) Escherichia coli KO11FL 11777174 YP_005278034.1 CDS EKO11_2365 NC_016902.1 2473169 2473786 R KEGG: eoi:ECO111_1846 putative enzyme; putative enzyme complement(2473169..2473786) Escherichia coli KO11FL 11777175 YP_005278035.1 CDS EKO11_2366 NC_016902.1 2474052 2475551 D PFAM: amino acid permease-associated region; KEGG: ebd:ECBD_2186 amino acid permease-associated region; amino acid permease 2474052..2475551 Escherichia coli KO11FL 11777176 YP_005278036.1 CDS EKO11_2367 NC_016902.1 2475666 2476727 R KEGG: sbc:SbBS512_E1724 hypothetical protein; hypothetical protein complement(2475666..2476727) Escherichia coli KO11FL 11777177 YP_005278037.1 CDS EKO11_2368 NC_016902.1 2476969 2479071 D PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sbo:SBO_1596 putative outer membrane receptor for iron transport; TonB-dependent receptor 2476969..2479071 Escherichia coli KO11FL 11779543 YP_005278038.1 CDS EKO11_2369 NC_016902.1 2479107 2479772 R KEGG: ebw:BWG_1276 putative DNA-binding transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator complement(2479107..2479772) Escherichia coli KO11FL 11777178 YP_005278039.1 CDS EKO11_2370 NC_016902.1 2479970 2481007 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: eoh:ECO103_1580 putative oxidoreductase, Zn-dependent and NAD(P)-binding; alcohol dehydrogenase complement(2479970..2481007) Escherichia coli KO11FL 11777179 YP_005278040.1 CDS EKO11_2371 NC_016902.1 2481188 2481706 D KEGG: ssn:SSON_1688 putative resistance protein; PFAM: GCN5-related N-acetyltransferase; phosphinothricin acetyltransferase 2481188..2481706 Escherichia coli KO11FL 11777180 YP_005278041.1 CDS EKO11_2372 NC_016902.1 2481703 2482152 D PFAM: protein of unknown function DUF606; KEGG: sbo:SBO_1601 hypothetical protein; hypothetical protein 2481703..2482152 Escherichia coli KO11FL 11777181 YP_005278042.1 CDS EKO11_2373 NC_016902.1 2482153 2482386 R PFAM: Protein of unknown function DUF2526; KEGG: sbc:SbBS512_E1716 hypothetical protein; hypothetical protein complement(2482153..2482386) Escherichia coli KO11FL 11779544 YP_005278043.1 CDS EKO11_2374 NC_016902.1 2482472 2482720 R KEGG: sdy:SDY_1729 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2566; hypothetical protein complement(2482472..2482720) Escherichia coli KO11FL 11777182 YP_005278044.1 CDS EKO11_2375 NC_016902.1 2483032 2484456 R KEGG: eok:G2583_1805 gamma-aminobutyraldehyde dehydrogenase; TIGRFAM: 1-pyrroline dehydrogenase; PFAM: Aldehyde Dehydrogenase; 1-pyrroline dehydrogenase complement(2483032..2484456) Escherichia coli KO11FL 11777183 YP_005278045.1 CDS EKO11_2376 NC_016902.1 2484478 2485272 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eoi:ECO111_1832 putative spermidine/putrescine transporter subunit; binding-protein-dependent transport system inner membrane protein complement(2484478..2485272) Escherichia coli KO11FL 11777184 YP_005278046.1 CDS EKO11_2377 NC_016902.1 2485262 2486203 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eok:G2583_1803 ABC transporter permease protein; binding-protein-dependent transport system inner membrane protein complement(2485262..2486203) Escherichia coli KO11FL 11777185 YP_005278047.1 CDS EKO11_2378 NC_016902.1 2486204 2487217 R KEGG: ebd:ECBD_2198 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; ABC transporter complement(2486204..2487217) Escherichia coli KO11FL 11777186 YP_005278048.1 CDS EKO11_2379 NC_016902.1 2487235 2488380 R PFAM: extracellular solute-binding protein family 1; KEGG: ssn:SSON_1697 putative transport protein; extracellular solute-binding protein complement(2487235..2488380) Escherichia coli KO11FL 11777187 YP_005278049.1 CDS EKO11_2380 NC_016902.1 2488625 2490031 R KEGG: eoh:ECO103_1569 fused putative DNA-binding transcriptional regulator/putative amino transferase; PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; DeoR family transcriptional regulator complement(2488625..2490031) Escherichia coli KO11FL 11777188 YP_005278050.1 CDS EKO11_2381 NC_016902.1 2490110 2490547 R KEGG: ebd:ECBD_2201 transcriptional regulator, XRE family; PFAM: Uncharacterised protein family UPF0150; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; transcriptional regulator, XRE family complement(2490110..2490547) Escherichia coli KO11FL 11777189 YP_005278051.1 CDS EKO11_2382 NC_016902.1 2490572 2490748 R PFAM: YcfA family protein; KEGG: ebd:ECBD_2202 YcfA family protein; hypothetical protein complement(2490572..2490748) Escherichia coli KO11FL 11777190 YP_005278052.1 CDS EKO11_2383 NC_016902.1 2490970 2491200 D manually curated; KEGG: ssn:SSON_1702 hypothetical protein; hypothetical protein 2490970..2491200 Escherichia coli KO11FL 11779545 YP_005278053.1 CDS EKO11_2384 NC_016902.1 2491292 2493295 R KEGG: eok:G2583_1796 peptidase, U32 family; manually curated; PFAM: peptidase U32; peptidase U32 complement(2491292..2493295) Escherichia coli KO11FL 11779546 YP_005278054.1 CDS EKO11_2385 NC_016902.1 2493326 2493862 R KEGG: ebd:ECBD_2205 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; transcriptional regulator, XRE family complement(2493326..2493862) Escherichia coli KO11FL 11777191 YP_005278055.1 CDS EKO11_2386 NC_016902.1 2493954 2495129 D KEGG: ebd:ECBD_2206 benzoate transporter; TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; benzoate transporter 2493954..2495129 Escherichia coli KO11FL 11777192 YP_005278056.1 CDS EKO11_2387 NC_016902.1 2495169 2496317 R KEGG: ssn:SSON_1709 putative virulence protein; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; transposase, IS605 OrfB family complement(2495169..2496317) Escherichia coli KO11FL 11777193 YP_005278057.1 CDS EKO11_2389 NC_016902.1 2496904 2497572 R KEGG: ebd:ECBD_2209 uncharacterized lipoprotein YdcL; lipoprotein YdcL complement(2496904..2497572) Escherichia coli KO11FL 11777195 YP_005278058.1 CDS EKO11_2390 NC_016902.1 2497875 2498468 R TIGRFAM: tellurite resistance protein TehB; KEGG: sdy:SDY_1747 tellurite resistance protein TehB; tellurite resistance protein TehB complement(2497875..2498468) Escherichia coli KO11FL 11777196 YP_005278059.1 CDS EKO11_2391 NC_016902.1 2498465 2499457 R KEGG: ssn:SSON_1713 potassium-tellurite ethidium and proflavin transporter; TIGRFAM: C4-dicarboxylate transporter/malic acid transport protein; PFAM: C4-dicarboxylate transporter/malic acid transport protein; C4-dicarboxylate transporter/malic acid transport protein complement(2498465..2499457) Escherichia coli KO11FL 11777197 YP_005278060.1 CDS EKO11_2392 NC_016902.1 2499581 2500561 D KEGG: eoj:ECO26_2026 putative enzyme; putative enzyme 2499581..2500561 Escherichia coli KO11FL 11777198 YP_005278061.1 CDS EKO11_2393 NC_016902.1 2500556 2501092 R PFAM: GCN5-related N-acetyltransferase; KEGG: eoi:ECO111_1816 ribosomal-protein-L7/L12-serine acetyltransferase; N-acetyltransferase GCN5 complement(2500556..2501092) Escherichia coli KO11FL 11777199 YP_005278062.1 CDS EKO11_2394 NC_016902.1 2501155 2501379 R PFAM: protein of unknown function DUF465; KEGG: sfv:SFV_1780 hypothetical protein; hypothetical protein complement(2501155..2501379) Escherichia coli KO11FL 11777200 YP_005278063.1 CDS EKO11_2395 NC_016902.1 2501519 2503174 R KEGG: sbo:SBO_1663 glucan biosynthesis protein D; manually curated; PFAM: periplasmic glucan biosynthesis protein MdoG; periplasmic glucan biosynthesis protein MdoG complement(2501519..2503174) Escherichia coli KO11FL 11779547 YP_005278064.1 CDS EKO11_2396 NC_016902.1 2503400 2504743 R PFAM: protein of unknown function DUF1338; KEGG: ssn:SSON_1719 hypothetical protein; hypothetical protein complement(2503400..2504743) Escherichia coli KO11FL 11779548 YP_005278065.1 CDS EKO11_2397 NC_016902.1 2504960 2505883 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ssn:SSON_1720 putative transcriptional regulator LysR-type; LysR family transcriptional regulator 2504960..2505883 Escherichia coli KO11FL 11777201 YP_005278066.1 CDS EKO11_2398 NC_016902.1 2505921 2507561 R KEGG: eoj:ECO26_2020 methyl-accepting chemotaxis protein III, riboseand galactose sensor receptor; PFAM: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer complement(2505921..2507561) Escherichia coli KO11FL 11777202 YP_005278067.1 CDS EKO11_2399 NC_016902.1 2507902 2508069 D KEGG: ebd:ECBD_2219 hypothetical protein; hypothetical protein 2507902..2508069 Escherichia coli KO11FL 11777203 YP_005278068.1 CDS EKO11_2400 NC_016902.1 2508181 2508354 R KEGG: sbc:SbBS512_E1643 hypothetical protein; hypothetical protein complement(2508181..2508354) Escherichia coli KO11FL 11777204 YP_005278069.1 CDS EKO11_2401 NC_016902.1 2508599 2509129 R KEGG: eoh:ECO103_1549 cytochrome b561; cytochrome b561 complement(2508599..2509129) Escherichia coli KO11FL 11777205 YP_005278070.1 CDS EKO11_2402 NC_016902.1 2509318 2510319 D TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: ssn:SSON_1725 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; glyceraldehyde-3-phosphate dehydrogenase, type I 2509318..2510319 Escherichia coli KO11FL 11777206 YP_005278071.1 CDS EKO11_2403 NC_016902.1 2510361 2511800 R PFAM: Aldehyde Dehydrogenase; KEGG: eok:G2583_1777 aldehyde dehydrogenase A; Aldehyde Dehydrogenase complement(2510361..2511800) Escherichia coli KO11FL 11777207 YP_005278072.1 CDS EKO11_2404 NC_016902.1 2511997 2512797 R PFAM: protein of unknown function DUF218; KEGG: ebd:ECBD_2226 protein of unknown function DUF218; hypothetical protein complement(2511997..2512797) Escherichia coli KO11FL 11777208 YP_005278073.1 CDS EKO11_2405 NC_016902.1 2513069 2516971 R TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase-associated domain protein; helicase domain protein; protein of unknown function DUF1605; KEGG: eok:G2583_1771 HrpA-like helicase; SMART: DEAD-like helicase ; AAA ATPase; helicase domain protein; ATP-dependent helicase HrpA complement(2513069..2516971) Escherichia coli KO11FL 11777209 YP_005278074.1 CDS EKO11_2406 NC_016902.1 2517172 2517777 D PFAM: NAD(P)H dehydrogenase (quinone); KEGG: sbc:SbBS512_E1632 azoreductase; NAD(P)H dehydrogenase (quinone) 2517172..2517777 Escherichia coli KO11FL 11779549 YP_005278075.1 CDS EKO11_2407 NC_016902.1 2517828 2519144 R KEGG: ebd:ECBD_2229 putative dual specificity phosphatase; PFAM: Dual specificity protein phosphatase; phosphoesterase PA-phosphatase related; SMART: Dual specificity phosphatase, subgroup, catalytic domain; Protein-tyrosine phosphatase, catalytic; putative dual specificity phosphatase complement(2517828..2519144) Escherichia coli KO11FL 11777210 YP_005278076.1 CDS EKO11_2408 NC_016902.1 2519134 2520891 R PFAM: alpha/beta hydrolase fold; KEGG: eoh:ECO103_1542 putative hydrolase; alpha/beta hydrolase fold protein complement(2519134..2520891) Escherichia coli KO11FL 11777211 YP_005278077.1 CDS EKO11_2409 NC_016902.1 2520907 2521803 R PFAM: phosphatidate cytidylyltransferase; KEGG: eoi:ECO111_1798 putative CDP-diglyceride synthase; phosphatidate cytidylyltransferase complement(2520907..2521803) Escherichia coli KO11FL 11777212 YP_005278078.1 CDS EKO11_2410 NC_016902.1 2521803 2522408 R PFAM: CDP-alcohol phosphatidyltransferase; KEGG: eoh:ECO103_1540 putative inner membrane protein; CDP-alcohol phosphatidyltransferase complement(2521803..2522408) Escherichia coli KO11FL 11777213 YP_005278079.1 CDS EKO11_2411 NC_016902.1 2522579 2524885 R KEGG: eoh:ECO103_1539 hypothetical protein; hypothetical protein complement(2522579..2524885) Escherichia coli KO11FL 11779550 YP_005278080.1 CDS EKO11_2412 NC_016902.1 2524949 2525809 R PFAM: aldo/keto reductase; KEGG: eoh:ECO103_1538 putative oxidoreductase; aldo/keto reductase complement(2524949..2525809) Escherichia coli KO11FL 11777214 YP_005278081.1 CDS EKO11_2413 NC_016902.1 2526040 2526630 R KEGG: eoj:ECO26_2004 putative hexapeptide repeat acetyltransferase; TIGRFAM: phenylacetic acid degradation protein PaaY; PFAM: transferase hexapeptide repeat containing protein; phenylacetic acid degradation protein PaaY complement(2526040..2526630) Escherichia coli KO11FL 11779551 YP_005278082.1 CDS EKO11_2414 NC_016902.1 2526612 2527562 R KEGG: eoi:ECO111_1793 transcriptional repressor for phenylacetic acid degradation; TIGRFAM: phenylacetic acid degradation operon negative regulatory protein PaaX; PFAM: PaaX domain protein domain; PaaX domain protein; PaaX family transcriptional regulator complement(2526612..2527562) Escherichia coli KO11FL 11779552 YP_005278083.1 CDS EKO11_2415 NC_016902.1 2527663 2528976 R TIGRFAM: phenylacetate-CoA ligase; KEGG: eoi:ECO111_1792 coenzyme A ligase; PFAM: AMP-dependent synthetase and ligase; phenylacetate-CoA ligase complement(2527663..2528976) Escherichia coli KO11FL 11777215 YP_005278084.1 CDS EKO11_2416 NC_016902.1 2529003 2530208 R KEGG: eoh:ECO103_1534 beta-ketoadipyl CoA thiolase; TIGRFAM: beta-ketoadipyl CoA thiolase; acetyl-CoA acetyltransferase; PFAM: Thiolase-like; beta-ketoadipyl CoA thiolase complement(2529003..2530208) Escherichia coli KO11FL 11777216 YP_005278085.1 CDS EKO11_2417 NC_016902.1 2530208 2530630 R KEGG: efe:EFER_1600 phenylacetate pathway hotdog-fold thioesterase; TIGRFAM: phenylacetic acid degradation protein PaaD; PFAM: thioesterase superfamily protein; phenylacetic acid degradation protein PaaD complement(2530208..2530630) Escherichia coli KO11FL 11777217 YP_005278086.1 CDS EKO11_2418 NC_016902.1 2530620 2532002 R KEGG: eoi:ECO111_1789 3-hydroxy-acyl-CoA dehydrogenase; TIGRFAM: 3-hydroxyacyl-CoA dehydrogenase PaaC; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; 3-hydroxyacyl-CoA dehydrogenase complement(2530620..2532002) Escherichia coli KO11FL 11777218 YP_005278087.1 CDS EKO11_2419 NC_016902.1 2532049 2532837 R KEGG: eoi:ECO111_1788 enoyl-CoA hydratase; TIGRFAM: phenylacetate degradation, enoyl-CoA hydratase paaB; PFAM: Enoyl-CoA hydratase/isomerase; phenylacetate degradation, enoyl-CoA hydratase paaB complement(2532049..2532837) Escherichia coli KO11FL 11779553 YP_005278088.1 CDS EKO11_2420 NC_016902.1 2532837 2533604 R PFAM: Enoyl-CoA hydratase/isomerase; KEGG: eoh:ECO103_1530 enoyl-CoA hydratase-isomerase; Enoyl-CoA hydratase/isomerase complement(2532837..2533604) Escherichia coli KO11FL 11777219 YP_005278089.1 CDS EKO11_2421 NC_016902.1 2533601 2534671 R KEGG: eoh:ECO103_1529 ferredoxin reductase electron transfer component; TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; phenylacetate-CoA oxygenase/reductase subunit PaaK complement(2533601..2534671) Escherichia coli KO11FL 11777220 YP_005278090.1 CDS EKO11_2422 NC_016902.1 2534679 2535176 R KEGG: eoh:ECO103_1528 putative multicomponent oxygenase/reductase subunit; TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; phenylacetate-CoA oxygenase subunit PaaJ complement(2534679..2535176) Escherichia coli KO11FL 11777221 YP_005278091.1 CDS EKO11_2423 NC_016902.1 2535191 2535937 R KEGG: eoi:ECO111_1784 putative multicomponent oxygenase/reductase subunit; TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; phenylacetate-CoA oxygenase subunit PaaI complement(2535191..2535937) Escherichia coli KO11FL 11777222 YP_005278092.1 CDS EKO11_2424 NC_016902.1 2535946 2536233 R KEGG: eoh:ECO103_1526 phenylacetate-CoA oxygenase subunit PaaB; TIGRFAM: phenylacetate-CoA oxygenase, PaaH subunit; PFAM: phenylacetic acid degradation B; phenylacetate-CoA oxygenase subunit PaaH complement(2535946..2536233) Escherichia coli KO11FL 11777223 YP_005278093.1 CDS EKO11_2425 NC_016902.1 2536245 2537174 R KEGG: eoh:ECO103_1525 phenylacetate-CoA oxygenase subunit PaaA; TIGRFAM: phenylacetate-CoA oxygenase, PaaG subunit; PFAM: phenylacetic acid catabolic family protein; phenylacetate-CoA oxygenase subunit PaaG complement(2536245..2537174) Escherichia coli KO11FL 11777224 YP_005278094.1 CDS EKO11_2426 NC_016902.1 2537459 2539504 D KEGG: ebw:BWG_1216 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; TIGRFAM: phenylacetic acid degradation protein paaN; PFAM: MaoC domain protein dehydratase; Aldehyde Dehydrogenase; phenylacetic acid degradation protein paaN 2537459..2539504 Escherichia coli KO11FL 11777225 YP_005278095.1 CDS EKO11_2427 NC_016902.1 2539752 2542025 D KEGG: eoi:ECO111_1780 tyramine oxidase; PFAM: Copper amine oxidase domain-containing protein; Copper amine oxidase N3-terminal; Copper amine oxidase N2-terminal; copper amine oxidase-like domain-containing protein; Primary-amine oxidase 2539752..2542025 Escherichia coli KO11FL 11777226 YP_005278096.1 CDS EKO11_2428 NC_016902.1 2542083 2543582 R PFAM: Aldehyde Dehydrogenase; KEGG: eoh:ECO103_1522 phenylacetaldehyde dehydrogenase; Aldehyde Dehydrogenase complement(2542083..2543582) Escherichia coli KO11FL 11777227 YP_005278097.1 CDS EKO11_2429 NC_016902.1 2543818 2544723 D KEGG: ebw:BWG_1213 DNA-binding transcriptional activator FeaR; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 2543818..2544723 Escherichia coli KO11FL 11777228 YP_005278098.1 CDS EKO11_2430 NC_016902.1 2544895 2545221 R PFAM: Uncharacterised conserved protein UCP025560; KEGG: eoh:ECO103_1520 hypothetical protein; hypothetical protein complement(2544895..2545221) Escherichia coli KO11FL 11777229 YP_005278099.1 CDS EKO11_2431 NC_016902.1 2545229 2545414 R KEGG: eoi:ECO111_1775 putative lipoprotein; putative lipoprotein complement(2545229..2545414) Escherichia coli KO11FL 11777230 YP_005278100.1 CDS EKO11_2432 NC_016902.1 2545411 2548050 R KEGG: eoi:ECO111_1774 hypothetical protein; hypothetical protein complement(2545411..2548050) Escherichia coli KO11FL 11777231 YP_005278101.1 CDS EKO11_2433 NC_016902.1 2548258 2549247 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: sbc:SbBS512_E1618 D-lactate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 2548258..2549247 Escherichia coli KO11FL 11777232 YP_005278102.1 CDS EKO11_2434 NC_016902.1 2549358 2549780 D PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: sbc:SbBS512_E1616 heat-inducible protein; hypothetical protein 2549358..2549780 Escherichia coli KO11FL 11779554 YP_005278103.1 CDS EKO11_2435 NC_016902.1 2549777 2550043 R PFAM: protein of unknown function DUF333; KEGG: sdy:SDY_1462 hypothetical protein; hypothetical protein complement(2549777..2550043) Escherichia coli KO11FL 11777233 YP_005278104.1 CDS EKO11_2436 NC_016902.1 2550317 2553841 D KEGG: eoh:ECO103_1513 fused putative pyruvate-flavodoxin oxidoreductase: hypothetical protein/hypothetical protein/FeS binding protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein; pyruvate ferredoxin/flavodoxin oxidoreductase 2550317..2553841 Escherichia coli KO11FL 11777234 YP_005278105.1 CDS EKO11_2437 NC_016902.1 2554207 2555340 D PFAM: porin Gram-negative type; KEGG: ebd:ECBD_2247 porin gram-negative type; porin 2554207..2555340 Escherichia coli KO11FL 11777235 YP_005278106.1 CDS EKO11_2438 NC_016902.1 2555481 2555915 D PFAM: UspA domain-containing protein; KEGG: eoh:ECO103_1511 stress-induced protein, ATP-binding protein; UspA domain-containing protein 2555481..2555915 Escherichia coli KO11FL 11777236 YP_005278107.1 CDS EKO11_2439 NC_016902.1 2556199 2556342 R hypothetical protein complement(2556199..2556342) Escherichia coli KO11FL 11777237 YP_005278108.1 CDS EKO11_2440 NC_016902.1 2556455 2557027 R KEGG: cro:ROD_02391 putative phage tail fibre protein; putative phage tail fiber protein complement(2556455..2557027) Escherichia coli KO11FL 11777238 YP_005278109.1 CDS EKO11_2441 NC_016902.1 2557042 2560182 R PFAM: Prophage tail fibre domain protein; tail fiber repeat 2 protein; KEGG: sei:SPC_2700 Gifsy-2 prophage probable tail fiber protein; Prophage tail fiber domain protein complement(2557042..2560182) Escherichia coli KO11FL 11777239 YP_005278110.1 CDS EKO11_2442 NC_016902.1 2560206 2560751 R PFAM: tail assembly chaperone gp38; KEGG: sbo:SBO_0956 putative tail fiber assembly protein; tail assembly chaperone gp38 complement(2560206..2560751) Escherichia coli KO11FL 11777240 YP_005278111.1 CDS EKO11_2443 NC_016902.1 2560754 2562307 R KEGG: sbo:SBO_0647 putative tail fiber protein; hypothetical protein complement(2560754..2562307) Escherichia coli KO11FL 11777241 YP_005278112.1 CDS EKO11_2444 NC_016902.1 2562304 2562930 R KEGG: sed:SeD_A1122 hypothetical protein; hypothetical protein complement(2562304..2562930) Escherichia coli KO11FL 11777242 YP_005278113.1 CDS EKO11_2445 NC_016902.1 2562914 2564140 R KEGG: sed:SeD_A1121 hypothetical protein; hypothetical protein complement(2562914..2564140) Escherichia coli KO11FL 11777243 YP_005278114.1 CDS EKO11_2446 NC_016902.1 2564162 2564701 D KEGG: sbi:SORBI_10g007560 hypothetical protein; hypothetical protein 2564162..2564701 Escherichia coli KO11FL 11777244 YP_005278115.1 CDS EKO11_2447 NC_016902.1 2564727 2564966 R hypothetical protein complement(2564727..2564966) Escherichia coli KO11FL 11777245 YP_005278116.1 CDS EKO11_2448 NC_016902.1 2565092 2565439 R KEGG: sed:SeD_A1120 hypothetical protein; hypothetical protein complement(2565092..2565439) Escherichia coli KO11FL 11777246 YP_005278117.1 CDS EKO11_2449 NC_016902.1 2565713 2565874 R manually curated; KEGG: stt:t1872 putative bacteriophage protein; hypothetical protein complement(2565713..2565874) Escherichia coli KO11FL 11777247 YP_005278118.1 CDS EKO11_2450 NC_016902.1 2565829 2566026 R hypothetical protein complement(2565829..2566026) Escherichia coli KO11FL 11777248 YP_005278119.1 CDS EKO11_2451 NC_016902.1 2566136 2566849 R KEGG: bcj:BCAM1899 putative phage baseplate protein; putative phage baseplate protein complement(2566136..2566849) Escherichia coli KO11FL 11777249 YP_005278120.1 CDS EKO11_2452 NC_016902.1 2566849 2567856 R KEGG: rcu:RCOM_0102660 hypothetical protein; hypothetical protein complement(2566849..2567856) Escherichia coli KO11FL 11777250 YP_005278121.1 CDS EKO11_2453 NC_016902.1 2567856 2568122 R KEGG: sed:SeD_A1117 hypothetical protein; hypothetical protein complement(2567856..2568122) Escherichia coli KO11FL 11779555 YP_005278122.1 CDS EKO11_2454 NC_016902.1 2568119 2568787 R KEGG: ent:Ent638_1044 hypothetical protein; hypothetical protein complement(2568119..2568787) Escherichia coli KO11FL 11779556 YP_005278123.1 CDS EKO11_2455 NC_016902.1 2568791 2570779 R PFAM: Lytic transglycosylase catalytic; KEGG: see:SNSL254_A1168 lytic transglycosylase, catalytic; lytic transglycosylase complement(2568791..2570779) Escherichia coli KO11FL 11777251 YP_005278124.1 CDS EKO11_2456 NC_016902.1 2570843 2571460 R KEGG: ent:Ent638_1042 hypothetical protein; hypothetical protein complement(2570843..2571460) Escherichia coli KO11FL 11777252 YP_005278125.1 CDS EKO11_2457 NC_016902.1 2571457 2571900 R KEGG: sed:SeD_A1111 hypothetical protein; hypothetical protein complement(2571457..2571900) Escherichia coli KO11FL 11777253 YP_005278126.1 CDS EKO11_2458 NC_016902.1 2571912 2573249 R KEGG: sed:SeD_A1110 hypothetical protein; hypothetical protein complement(2571912..2573249) Escherichia coli KO11FL 11777254 YP_005278127.1 CDS EKO11_2459 NC_016902.1 2573249 2574193 R KEGG: ent:Ent638_1039 hypothetical protein; hypothetical protein complement(2573249..2574193) Escherichia coli KO11FL 11779557 YP_005278128.1 CDS EKO11_2460 NC_016902.1 2574180 2574620 R KEGG: sed:SeD_A1108 hypothetical protein; hypothetical protein complement(2574180..2574620) Escherichia coli KO11FL 11777255 YP_005278129.1 CDS EKO11_2461 NC_016902.1 2574617 2575057 R KEGG: sed:SeD_A1107 hypothetical protein; hypothetical protein complement(2574617..2575057) Escherichia coli KO11FL 11777256 YP_005278130.1 CDS EKO11_2462 NC_016902.1 2575057 2575527 R KEGG: ent:Ent638_1036 hypothetical protein; hypothetical protein complement(2575057..2575527) Escherichia coli KO11FL 11777257 YP_005278131.1 CDS EKO11_2463 NC_016902.1 2575585 2576613 R KEGG: spq:SPAB_01008 hypothetical protein; hypothetical protein complement(2575585..2576613) Escherichia coli KO11FL 11779558 YP_005278132.1 CDS EKO11_2464 NC_016902.1 2576628 2577245 R KEGG: spq:SPAB_01007 hypothetical protein; hypothetical protein complement(2576628..2577245) Escherichia coli KO11FL 11777258 YP_005278133.1 CDS EKO11_2465 NC_016902.1 2577238 2578560 R KEGG: sed:SeD_A1103 NUDIX hydrolase; NUDIX hydrolase complement(2577238..2578560) Escherichia coli KO11FL 11777259 YP_005278134.1 CDS EKO11_2466 NC_016902.1 2578541 2579374 R KEGG: ent:Ent638_1032 hypothetical protein; hypothetical protein complement(2578541..2579374) Escherichia coli KO11FL 11777260 YP_005278135.1 CDS EKO11_2467 NC_016902.1 2579319 2580755 R KEGG: sed:SeD_A1101 hypothetical protein; hypothetical protein complement(2579319..2580755) Escherichia coli KO11FL 11777261 YP_005278136.1 CDS EKO11_2468 NC_016902.1 2580774 2582102 R KEGG: spq:SPAB_01003 hypothetical protein; hypothetical protein complement(2580774..2582102) Escherichia coli KO11FL 11777262 YP_005278137.1 CDS EKO11_2469 NC_016902.1 2582092 2583183 R KEGG: kva:Kvar_2100 terminase small subunit; terminase small subunit complement(2582092..2583183) Escherichia coli KO11FL 11777263 YP_005278138.1 CDS EKO11_2470 NC_016902.1 2583187 2583438 R manually curated; KEGG: ypi:YpsIP31758_2229 hypothetical protein; hypothetical protein complement(2583187..2583438) Escherichia coli KO11FL 11777264 YP_005278139.1 CDS EKO11_2471 NC_016902.1 2583374 2584306 R KEGG: tgo:TGME49_104650 hypothetical protein; hypothetical protein complement(2583374..2584306) Escherichia coli KO11FL 11777265 YP_005278140.1 CDS EKO11_2472 NC_016902.1 2584299 2585087 R KEGG: ypi:YpsIP31758_2231 ParB family protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; ParB domain-containing protein nuclease complement(2584299..2585087) Escherichia coli KO11FL 11777266 YP_005278141.1 CDS EKO11_2473 NC_016902.1 2585211 2585318 R hypothetical protein complement(2585211..2585318) Escherichia coli KO11FL 11779559 YP_005278142.1 CDS EKO11_2474 NC_016902.1 2585492 2585647 R KEGG: set:SEN1396 putative phage encoded exported protein; hypothetical protein complement(2585492..2585647) Escherichia coli KO11FL 11779560 YP_005278143.1 CDS EKO11_2475 NC_016902.1 2585689 2586066 R KEGG: eok:G2583_2135 phage capsid scaffolding protein; phage capsid scaffolding protein complement(2585689..2586066) Escherichia coli KO11FL 11777267 YP_005278144.1 CDS EKO11_2476 NC_016902.1 2586069 2586344 R PFAM: protein of unknown function DUF754; KEGG: set:SEN1394 putative prophage membrane protein; hypothetical protein complement(2586069..2586344) Escherichia coli KO11FL 11777268 YP_005278145.1 CDS EKO11_2477 NC_016902.1 2586334 2586726 R KEGG: cro:ROD_02691 putative prophage membrane protein; putative prophage membrane protein complement(2586334..2586726) Escherichia coli KO11FL 11777269 YP_005278146.1 CDS EKO11_2478 NC_016902.1 2587997 2588533 R PFAM: protein of unknown function DUF1133; KEGG: set:SEN1391 hypothetical protein; hypothetical protein complement(2587997..2588533) Escherichia coli KO11FL 11777272 YP_005278147.1 CDS EKO11_2479 NC_016902.1 2588530 2588820 R PFAM: protein of unknown function DUF1364; KEGG: ssn:SSON_1777 putative bacteriophage protein; hypothetical protein complement(2588530..2588820) Escherichia coli KO11FL 11779561 YP_005278148.1 CDS EKO11_2480 NC_016902.1 2588820 2589419 R PFAM: protein of unknown function DUF1367; KEGG: ssn:SSON_1778 unknown protein encoded within prophage; hypothetical protein complement(2588820..2589419) Escherichia coli KO11FL 11779562 YP_005278149.1 CDS EKO11_2481 NC_016902.1 2589888 2590043 R PFAM: Hok/gef cell toxic protein; KEGG: sty:STY2054 hypothetical protein; Hok/gef cell toxic protein complement(2589888..2590043) Escherichia coli KO11FL 11777273 YP_005278150.1 CDS EKO11_2482 NC_016902.1 2590674 2591651 R KEGG: dat:HRM2_15030 hypothetical protein; hypothetical protein complement(2590674..2591651) Escherichia coli KO11FL 11777274 YP_005278151.1 CDS EKO11_2483 NC_016902.1 2591648 2592757 R KEGG: dat:HRM2_15020 putative ATP-dependent endonuclease (OLD family protein); putative ATP-dependent endonuclease (OLD family protein) complement(2591648..2592757) Escherichia coli KO11FL 11777275 YP_005278152.1 CDS EKO11_2484 NC_016902.1 2592750 2593877 R PFAM: protein of unknown function DUF262; KEGG: dat:HRM2_15010 hypothetical protein; hypothetical protein complement(2592750..2593877) Escherichia coli KO11FL 11777276 YP_005278153.1 CDS EKO11_2485 NC_016902.1 2594061 2594483 R PFAM: protein of unknown function DUF977; KEGG: sbc:SbBS512_E1436 hypothetical protein; hypothetical protein complement(2594061..2594483) Escherichia coli KO11FL 11777277 YP_005278154.1 CDS EKO11_2486 NC_016902.1 2594499 2595260 R PFAM: protein of unknown function DUF1627; KEGG: eoj:ECO26_1929 hypothetical protein; hypothetical protein complement(2594499..2595260) Escherichia coli KO11FL 11777278 YP_005278155.1 CDS EKO11_2487 NC_016902.1 2595283 2596029 R KEGG: ebw:BWG_1195 putative replication protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; IstB domain-containing protein ATP-binding protein complement(2595283..2596029) Escherichia coli KO11FL 11777279 YP_005278156.1 CDS EKO11_2488 NC_016902.1 2596036 2596893 R KEGG: ebw:BWG_1194 Rac prophage; hypothetical protein; putative Rac prophage protein complement(2596036..2596893) Escherichia coli KO11FL 11777280 YP_005278157.1 CDS EKO11_2489 NC_016902.1 2596906 2597328 R PFAM: protein of unknown function DUF1019; KEGG: eoj:ECO26_1926 putative phage regulatory protein CII; hypothetical protein complement(2596906..2597328) Escherichia coli KO11FL 11777281 YP_005278158.1 CDS EKO11_2490 NC_016902.1 2597325 2597579 R KEGG: eoj:ECO26_1925 putative antirepressor Cro; putative antirepressor Cro complement(2597325..2597579) Escherichia coli KO11FL 11777282 YP_005278159.1 CDS EKO11_2491 NC_016902.1 2597659 2598078 D KEGG: sbo:SBO_0973 putative transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 2597659..2598078 Escherichia coli KO11FL 11777283 YP_005278160.1 CDS EKO11_2492 NC_016902.1 2598115 2598333 D manually curated; KEGG: eoi:ECO111_1410 hypothetical protein; hypothetical protein 2598115..2598333 Escherichia coli KO11FL 11777284 YP_005278161.1 CDS EKO11_2493 NC_016902.1 2598509 2598661 D PFAM: protein of unknown function DUF1391; KEGG: ebd:ECBD_2262 protein of unknown function DUF1391; hypothetical protein 2598509..2598661 Escherichia coli KO11FL 11777285 YP_005278162.1 CDS EKO11_2494 NC_016902.1 2599082 2599303 D KEGG: eoj:ECO26_2668 FtsZ inhibitor protein; FtsZ inhibitor protein 2599082..2599303 Escherichia coli KO11FL 11777286 YP_005278163.1 CDS EKO11_2495 NC_016902.1 2599303 2599473 D KEGG: eoj:ECO26_2669 hypothetical protein; hypothetical protein 2599303..2599473 Escherichia coli KO11FL 11777287 YP_005278164.1 CDS EKO11_2496 NC_016902.1 2599548 2599823 D KEGG: ebd:ECBD_2266 hypothetical protein; hypothetical protein 2599548..2599823 Escherichia coli KO11FL 11777288 YP_005278165.1 CDS EKO11_2497 NC_016902.1 2599925 2602525 D PFAM: exodeoxyribonuclease VIII; KEGG: ebr:ECB_01327 exonuclease VIII; exodeoxyribonuclease VIII 2599925..2602525 Escherichia coli KO11FL 11777289 YP_005278166.1 CDS EKO11_2498 NC_016902.1 2602518 2603327 D KEGG: ebd:ECBD_2268 recombination and repair protein RecT; TIGRFAM: RecT protein; PFAM: DNA single-strand annealing protein RecT-like; RecT protein 2602518..2603327 Escherichia coli KO11FL 11777290 YP_005278167.1 CDS EKO11_2499 NC_016902.1 2603345 2603578 D KEGG: eoj:ECO26_2673 restriction alleviation and modification protein; manually curated; TIGRFAM: restriction alleviation protein, Lar family; restriction alleviation protein, Lar family 2603345..2603578 Escherichia coli KO11FL 11777291 YP_005278168.1 CDS EKO11_2500 NC_016902.1 2603559 2603780 D KEGG: ebd:ECBD_2269 hypothetical protein; manually curated; PFAM: protein of unknown function DUF1187; hypothetical protein 2603559..2603780 Escherichia coli KO11FL 11777292 YP_005278169.1 CDS EKO11_2501 NC_016902.1 2603859 2604074 D PFAM: protein of unknown function DUF1233 excisionase; KEGG: ebd:ECBD_2270 protein of unknown function DUF1233 excisionase putative; hypothetical protein 2603859..2604074 Escherichia coli KO11FL 11777293 YP_005278170.1 CDS EKO11_2502 NC_016902.1 2604076 2605311 D PFAM: integrase family protein; KEGG: ebw:BWG_1179 Rac prophage; integrase; integrase family protein 2604076..2605311 Escherichia coli KO11FL 11777294 YP_005278171.1 CDS EKO11_2503 NC_016902.1 2605363 2606298 D PFAM: PP-loop domain protein; KEGG: ssn:SSON_1787 C32 tRNA thiolase; PP-loop domain-containing protein 2605363..2606298 Escherichia coli KO11FL 11777295 YP_005278172.1 CDS EKO11_2504 NC_016902.1 2606427 2607800 R KEGG: eoh:ECO103_1509 ATP-dependent RNA helicase DbpA; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein; DEAD/DEAH box helicase complement(2606427..2607800) Escherichia coli KO11FL 11777296 YP_005278173.1 CDS EKO11_2505 NC_016902.1 2607830 2608003 R KEGG: ebd:ECBD_2274 hypothetical protein; hypothetical protein complement(2607830..2608003) Escherichia coli KO11FL 11777297 YP_005278174.1 CDS EKO11_2506 NC_016902.1 2608278 2609261 R PFAM: Mg2 transporter protein CorA family protein; KEGG: sdy:SDY_1424 zinc transporter; Mg2 transporter protein CorA family protein complement(2608278..2609261) Escherichia coli KO11FL 11777298 YP_005278175.1 CDS EKO11_2507 NC_016902.1 2609516 2610748 D TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: ebw:BWG_1175 putative diguanylate cyclase, GGDEF domain signalling protein; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; PAS/PAC sensor-containing diguanylate cyclase 2609516..2610748 Escherichia coli KO11FL 11777299 YP_005278176.1 CDS EKO11_2508 NC_016902.1 2610769 2611332 R KEGG: ssn:SSON_1791 hypothetical protein; PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2; Smr protein/MutS2 complement(2610769..2611332) Escherichia coli KO11FL 11777300 YP_005278177.1 CDS EKO11_2509 NC_016902.1 2611662 2612570 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eoh:ECO103_1505 putative DNA-binding transcriptional regulator; LysR family transcriptional regulator complement(2611662..2612570) Escherichia coli KO11FL 11777301 YP_005278178.1 CDS EKO11_2510 NC_016902.1 2612746 2614056 D KEGG: eoi:ECO111_1724 putative peptidase, aminobenzoyl-glutamate utilization protein AbgA; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 2612746..2614056 Escherichia coli KO11FL 11779563 YP_005278179.1 CDS EKO11_2511 NC_016902.1 2614056 2615501 D KEGG: ssn:SSON_1794 hypothetical protein; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; amidohydrolase 2614056..2615501 Escherichia coli KO11FL 11777302 YP_005278180.1 CDS EKO11_2512 NC_016902.1 2615538 2617064 D KEGG: eok:G2583_1684 aminobenzoyl-glutamate transport protein; TIGRFAM: AbgT transporter family; PFAM: AbgT transporter; AbgT transporter family 2615538..2617064 Escherichia coli KO11FL 11777303 YP_005278181.1 CDS EKO11_2513 NC_016902.1 2617075 2617590 D KEGG: ssn:SSON_1798 O-6-alkylguanine-DNA:cysteine-protein methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylguanine DNA methyltransferase ribonuclease domain protein; methylated-DNA--protein-cysteine methyltransferase 2617075..2617590 Escherichia coli KO11FL 11777304 YP_005278182.1 CDS EKO11_2514 NC_016902.1 2617785 2618537 D KEGG: sbc:SbBS512_E1575 fumarate/nitrate reduction transcriptional regulator; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; CarD family transcriptional regulator 2617785..2618537 Escherichia coli KO11FL 11777305 YP_005278183.1 CDS EKO11_2515 NC_016902.1 2618689 2619639 D PFAM: UspA domain-containing protein; KEGG: ssn:SSON_1800 universal stress protein UspE; UspA domain-containing protein 2618689..2619639 Escherichia coli KO11FL 11777306 YP_005278184.1 CDS EKO11_2516 NC_016902.1 2619689 2619946 R PFAM: Protein of unknown function DUF2534; KEGG: ssn:SSON_1801 hypothetical protein; hypothetical protein complement(2619689..2619946) Escherichia coli KO11FL 11777307 YP_005278185.1 CDS EKO11_2517 NC_016902.1 2620190 2621221 D PFAM: MscS Mechanosensitive ion channel; KEGG: sbc:SbBS512_E1570 transporter, small conductance mechanosensitive ion channel family; mechanosensitive ion channel MscS 2620190..2621221 Escherichia coli KO11FL 11779564 YP_005278186.1 CDS EKO11_2518 NC_016902.1 2621272 2622885 R PFAM: extracellular solute-binding protein family 5; KEGG: ebd:ECBD_2287 extracellular solute-binding protein family 5; family 5 extracellular solute-binding protein complement(2621272..2622885) Escherichia coli KO11FL 11777308 YP_005278187.1 CDS EKO11_2520 NC_016902.1 2623222 2624121 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sbo:SBO_1734 putative transcriptional regulator LysR-type; LysR family transcriptional regulator complement(2623222..2624121) Escherichia coli KO11FL 11777310 YP_005278188.1 CDS EKO11_2521 NC_016902.1 2624259 2625179 D KEGG: ssn:SSON_1806 hypothetical protein; hypothetical protein 2624259..2625179 Escherichia coli KO11FL 11777311 YP_005278189.1 CDS EKO11_2523 NC_016902.1 2626117 2626767 D KEGG: eok:G2583_1674 NmrA family protein; NmrA family protein 2626117..2626767 Escherichia coli KO11FL 11777312 YP_005278190.1 CDS EKO11_2524 NC_016902.1 2627058 2627786 D PFAM: peptidase M14 carboxypeptidase A; KEGG: sbo:SBO_1744 murein peptide amidase A; peptidase M14 carboxypeptidase A 2627058..2627786 Escherichia coli KO11FL 11777313 YP_005278191.1 CDS EKO11_2525 NC_016902.1 2627761 2628726 R PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: eoj:ECO26_1893 L-Ala-D/L-Glu epimerase; mandelate racemase/muconate lactonizing protein complement(2627761..2628726) Escherichia coli KO11FL 11777314 YP_005278192.1 CDS EKO11_2526 NC_016902.1 2628845 2629351 D PFAM: Redoxin domain protein; KEGG: sdy:SDY_1402 thiol peroxidase; Redoxin domain-containing protein 2628845..2629351 Escherichia coli KO11FL 11777315 YP_005278193.1 CDS EKO11_2527 NC_016902.1 2629395 2630936 R KEGG: eoh:ECO103_1488 DNA-binding transcriptional regulator TyrR; PFAM: sigma-54 factor interaction domain-containing protein; amino acid-binding ACT domain protein; SMART: AAA ATPase; PAS domain containing protein; transcriptional regulator TyrR complement(2629395..2630936) Escherichia coli KO11FL 11779566 YP_005278194.1 CDS EKO11_2528 NC_016902.1 2631084 2632145 R PFAM: Uncharacterised protein family UPF0283; KEGG: sbc:SbBS512_E1555 hypothetical protein; hypothetical protein complement(2631084..2632145) Escherichia coli KO11FL 11777316 YP_005278195.1 CDS EKO11_2529 NC_016902.1 2632142 2633539 R PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: eoh:ECO103_1486 hypothetical protein; hypothetical protein complement(2632142..2633539) Escherichia coli KO11FL 11777317 YP_005278196.1 CDS EKO11_2530 NC_016902.1 2633694 2634692 D KEGG: eoh:ECO103_1485 putative DNA-binding transcriptional regulator, LacI-type; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator 2633694..2634692 Escherichia coli KO11FL 11779567 YP_005278197.1 CDS EKO11_2531 NC_016902.1 2634803 2635708 R PFAM: Outer membrane protein G; KEGG: ebd:ECBD_2298 hypothetical protein; Outer membrane protein G complement(2634803..2635708) Escherichia coli KO11FL 11777318 YP_005278198.1 CDS EKO11_2532 NC_016902.1 2635753 2636835 R KEGG: eoh:ECO103_1482 putative sugar transporter subunit; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; ABC transporter complement(2635753..2636835) Escherichia coli KO11FL 11777319 YP_005278199.1 CDS EKO11_2533 NC_016902.1 2636849 2637508 R KEGG: eoh:ECO103_1481 putative beta-phosphoglucomutase; TIGRFAM: beta-phosphoglucomutase; beta-phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; beta-phosphoglucomutase complement(2636849..2637508) Escherichia coli KO11FL 11777320 YP_005278200.1 CDS EKO11_2534 NC_016902.1 2637505 2639772 R PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: eoh:ECO103_1480 putative hydrolase; glycoside hydrolase family protein complement(2637505..2639772) Escherichia coli KO11FL 11777321 YP_005278201.1 CDS EKO11_2535 NC_016902.1 2639769 2640824 R PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ebd:ECBD_2302 oxidoreductase domain protein; oxidoreductase domain-containing protein complement(2639769..2640824) Escherichia coli KO11FL 11779568 YP_005278202.1 CDS EKO11_2536 NC_016902.1 2640834 2641622 R PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: ebd:ECBD_2303 xylose isomerase domain protein TIM barrel; xylose isomerase domain-containing protein complement(2640834..2641622) Escherichia coli KO11FL 11777322 YP_005278203.1 CDS EKO11_2537 NC_016902.1 2641640 2642692 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: sfv:SFV_1329 putative oxidoreductase; alcohol dehydrogenase complement(2641640..2642692) Escherichia coli KO11FL 11777323 YP_005278204.1 CDS EKO11_2538 NC_016902.1 2642723 2643565 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebd:ECBD_2305 binding-protein-dependent transport systems inner membrane component; binding-protein-dependent transport system inner membrane protein complement(2642723..2643565) Escherichia coli KO11FL 11777324 YP_005278205.1 CDS EKO11_2539 NC_016902.1 2643552 2644433 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ssn:SSON_1829 putative binding-protein dependent transport protein; binding-protein-dependent transport system inner membrane protein complement(2643552..2644433) Escherichia coli KO11FL 11777325 YP_005278206.1 CDS EKO11_2540 NC_016902.1 2644454 2645746 R PFAM: extracellular solute-binding protein family 1; KEGG: eoi:ECO111_1694 putative sugar transporter subunit; extracellular solute-binding protein complement(2644454..2645746) Escherichia coli KO11FL 11777326 YP_005278207.1 CDS EKO11_2541 NC_016902.1 2645760 2647439 R KEGG: ebd:ECBD_2308 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; alpha amylase complement(2645760..2647439) Escherichia coli KO11FL 11777327 YP_005278208.1 CDS EKO11_2542 NC_016902.1 2647652 2647966 R TIGRFAM: phage shock operon rhodanese PspE; PFAM: Rhodanese domain protein; KEGG: sbc:SbBS512_E1544 thiosulfate:cyanide sulfurtransferase; SMART: Rhodanese domain protein; phage shock operon rhodanese PspE complement(2647652..2647966) Escherichia coli KO11FL 11777328 YP_005278209.1 CDS EKO11_2543 NC_016902.1 2648041 2648262 R KEGG: sdy:SDY_1937 peripheral inner membrane phage-shock protein; TIGRFAM: phage shock protein PspD; PFAM: shock protein PspD; phage shock protein PspD complement(2648041..2648262) Escherichia coli KO11FL 11777329 YP_005278210.1 CDS EKO11_2544 NC_016902.1 2648271 2648630 R KEGG: eoh:ECO103_1470 DNA-binding transcriptional activator PspC; TIGRFAM: phage shock protein C; PFAM: PspC domain protein; phage shock protein C, PspC complement(2648271..2648630) Escherichia coli KO11FL 11777330 YP_005278211.1 CDS EKO11_2545 NC_016902.1 2648630 2648854 R KEGG: sdy:SDY_1939 phage shock protein B; TIGRFAM: phage shock protein B; PFAM: shock B family protein; phage shock protein B complement(2648630..2648854) Escherichia coli KO11FL 11777331 YP_005278212.1 CDS EKO11_2546 NC_016902.1 2648908 2649576 R KEGG: sbc:SbBS512_E1540 phage shock protein PspA; TIGRFAM: phage shock protein A; PFAM: PspA/IM30 family protein; phage shock protein A, PspA complement(2648908..2649576) Escherichia coli KO11FL 11777332 YP_005278213.1 CDS EKO11_2547 NC_016902.1 2649743 2650720 D TIGRFAM: psp operon transcriptional activator; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; KEGG: eok:G2583_1650 PSP operon transcriptional activator; SMART: AAA ATPase; Fis family sigma-54 specific transcriptional activator PspF 2649743..2650720 Escherichia coli KO11FL 11779569 YP_005278214.1 CDS EKO11_2548 NC_016902.1 2650840 2652105 R KEGG: sbo:SBO_1760 4-aminobutyrate transaminase; TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; 4-aminobutyrate aminotransferase complement(2650840..2652105) Escherichia coli KO11FL 11777333 YP_005278215.1 CDS EKO11_2549 NC_016902.1 2652143 2653423 R PFAM: FAD dependent oxidoreductase; KEGG: ebd:ECBD_2316 FAD dependent oxidoreductase; FAD dependent oxidoreductase complement(2652143..2653423) Escherichia coli KO11FL 11777334 YP_005278216.1 CDS EKO11_2550 NC_016902.1 2653425 2654912 R PFAM: Aldehyde Dehydrogenase; KEGG: sfv:SFV_1314 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Aldehyde Dehydrogenase complement(2653425..2654912) Escherichia coli KO11FL 11777335 YP_005278217.1 CDS EKO11_2551 NC_016902.1 2655187 2655744 R KEGG: sdy:SDY_1945 DNA-binding transcriptional repressor PuuR; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; cupin complement(2655187..2655744) Escherichia coli KO11FL 11777336 YP_005278218.1 CDS EKO11_2552 NC_016902.1 2655771 2656535 R KEGG: eok:G2583_1645 gamma-glutamyl-gamma-aminobutyrate hydrolase; PFAM: peptidase C26; gamma-glutamyl-gamma-aminobutyrate hydrolase complement(2655771..2656535) Escherichia coli KO11FL 11777337 YP_005278219.1 CDS EKO11_2553 NC_016902.1 2656747 2658165 D PFAM: glutamine synthetase catalytic region; KEGG: eoi:ECO111_1680 gamma-Glu-putrescine synthase; glutamine synthetase 2656747..2658165 Escherichia coli KO11FL 11777338 YP_005278220.1 CDS EKO11_2554 NC_016902.1 2658468 2659853 D PFAM: amino acid permease-associated region; KEGG: ebd:ECBD_2321 amino acid permease-associated region; amino acid permease 2658468..2659853 Escherichia coli KO11FL 11777339 YP_005278221.1 CDS EKO11_2555 NC_016902.1 2659987 2660232 D KEGG: sdy:SDY_1637 hypothetical protein; hypothetical protein 2659987..2660232 Escherichia coli KO11FL 11777340 YP_005278222.1 CDS EKO11_2556 NC_016902.1 2660545 2662188 D PFAM: extracellular solute-binding protein family 5; KEGG: sbc:SbBS512_E1530 peptide ABC transporter, periplasmic peptide-binding protein; family 5 extracellular solute-binding protein 2660545..2662188 Escherichia coli KO11FL 11777341 YP_005278223.1 CDS EKO11_2557 NC_016902.1 2662185 2663150 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbc:SbBS512_E1529 peptide ABC transporter, permease protein SapB; binding-protein-dependent transport system inner membrane protein 2662185..2663150 Escherichia coli KO11FL 11777342 YP_005278224.1 CDS EKO11_2558 NC_016902.1 2663137 2664027 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbc:SbBS512_E1528 peptide ABC transporter, permease protein SapC; binding-protein-dependent transport system inner membrane protein 2663137..2664027 Escherichia coli KO11FL 11777343 YP_005278225.1 CDS EKO11_2559 NC_016902.1 2664027 2665019 D TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: sbc:SbBS512_E1527 peptide ABC transporter, ATP-binding protein SapD; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase 2664027..2665019 Escherichia coli KO11FL 11777344 YP_005278226.1 CDS EKO11_2560 NC_016902.1 2665021 2665827 D KEGG: sbc:SbBS512_E1526 peptide ABC transporter, ATP-binding protein SapF; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 2665021..2665827 Escherichia coli KO11FL 11777345 YP_005278227.1 CDS EKO11_2561 NC_016902.1 2665898 2666248 D KEGG: eoh:ECO103_1453 hypothetical protein; hypothetical protein 2665898..2666248 Escherichia coli KO11FL 11777346 YP_005278228.1 CDS EKO11_2562 NC_016902.1 2666618 2667406 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sbo:SBO_1774 enoyl-(acyl carrier protein) reductase; short-chain dehydrogenase/reductase SDR 2666618..2667406 Escherichia coli KO11FL 11779570 YP_005278229.1 CDS EKO11_2563 NC_016902.1 2667551 2668678 D KEGG: eoh:ECO103_1451 putative oxidoreductase; putative oxidoreductase 2667551..2668678 Escherichia coli KO11FL 11777347 YP_005278230.1 CDS EKO11_2564 NC_016902.1 2668746 2670680 D SMART: Cold shock protein; TIGRFAM: exoribonuclease II; VacB and RNase II family 3'-5' exoribonuclease; KEGG: eoh:ECO103_1450 exoribonuclease II; PFAM: ribonuclease II; Ribonuclease B OB region domain; RNA binding S1 domain protein; exoribonuclease II 2668746..2670680 Escherichia coli KO11FL 11777348 YP_005278231.1 CDS EKO11_2565 NC_016902.1 2670916 2672901 D TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; KEGG: eoh:ECO103_1449 RNase II stability modulator; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 2670916..2672901 Escherichia coli KO11FL 11777349 YP_005278232.1 CDS EKO11_2566 NC_016902.1 2673048 2673221 D KEGG: sdy:SDY_1362 hypothetical protein; hypothetical protein 2673048..2673221 Escherichia coli KO11FL 11777350 YP_005278233.1 CDS EKO11_2567 NC_016902.1 2673311 2674060 D KEGG: sdy:SDY_1361 putative DeoR-type transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator 2673311..2674060 Escherichia coli KO11FL 11777351 YP_005278234.1 CDS EKO11_2568 NC_016902.1 2674329 2674547 D KEGG: cro:ROD_17171 osmotically inducible lipoprotein B; osmotically inducible lipoprotein B 2674329..2674547 Escherichia coli KO11FL 11777352 YP_005278235.1 CDS EKO11_2569 NC_016902.1 2674673 2674999 R KEGG: ssn:SSON_1858 translation initiation factor SUI1; TIGRFAM: translation initiation factor SUI1; PFAM: translation initiation factor SUI1; translation initiation factor SUI1 complement(2674673..2674999) Escherichia coli KO11FL 11777353 YP_005278236.1 CDS EKO11_2570 NC_016902.1 2674999 2675796 R TIGRFAM: orotidine 5'-phosphate decarboxylase; KEGG: ebd:ECBD_2338 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase complement(2674999..2675796) Escherichia coli KO11FL 11777354 YP_005278237.1 CDS EKO11_2571 NC_016902.1 2675929 2677098 R KEGG: sbc:SbBS512_E1508 tetratricopeptide repeat protein; tetratricopeptide repeat protein complement(2675929..2677098) Escherichia coli KO11FL 11777355 YP_005278238.1 CDS EKO11_2572 NC_016902.1 2677105 2677413 R KEGG: sbc:SbBS512_E1507 hypothetical protein; hypothetical protein complement(2677105..2677413) Escherichia coli KO11FL 11777356 YP_005278239.1 CDS EKO11_2573 NC_016902.1 2677562 2678326 R PFAM: phosphoesterase PA-phosphatase related; KEGG: sdy:SDY_1354 phosphatidylglycerophosphatase B; SMART: phosphoesterase PA-phosphatase related; phosphatidylglycerophosphatase complement(2677562..2678326) Escherichia coli KO11FL 11777357 YP_005278240.1 CDS EKO11_2574 NC_016902.1 2678496 2679086 D TIGRFAM: GTP cyclohydrolase II; KEGG: sbo:SBO_1787 GTP cyclohydrolase II; PFAM: GTP cyclohydrolase II; GTP cyclohydrolase II 2678496..2679086 Escherichia coli KO11FL 11777358 YP_005278241.1 CDS EKO11_2575 NC_016902.1 2679150 2681825 R KEGG: eoi:ECO111_1657 aconitate hydratase; TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain-containing protein; aconitate hydratase 1 complement(2679150..2681825) Escherichia coli KO11FL 11777359 YP_005278242.1 CDS EKO11_2576 NC_016902.1 2682198 2682365 R KEGG: sdy:SDY_1349 hypothetical protein; hypothetical protein complement(2682198..2682365) Escherichia coli KO11FL 11777360 YP_005278243.1 CDS EKO11_2577 NC_016902.1 2682368 2682496 R KEGG: sdy:SDY_1348 hypothetical protein; hypothetical protein complement(2682368..2682496) Escherichia coli KO11FL 11777361 YP_005278244.1 CDS EKO11_2578 NC_016902.1 2682827 2683801 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sbc:SbBS512_E1501 transcriptional regulator CysB; LysR family transcriptional regulator complement(2682827..2683801) Escherichia coli KO11FL 11777362 YP_005278245.1 CDS EKO11_2579 NC_016902.1 2684011 2686608 R SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein; TIGRFAM: DNA topoisomerase I; KEGG: sbo:SBO_1792 DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; DNA topoisomerase type IA zn finger domain protein; DNA topoisomerase I zinc ribbon domain protein; DNA topoisomerase I complement(2684011..2686608) Escherichia coli KO11FL 11777363 YP_005278246.1 CDS EKO11_2580 NC_016902.1 2686988 2687239 D PFAM: Protein of unknown function DUF2498; KEGG: sdy:SDY_1343 hypothetical protein; hypothetical protein 2686988..2687239 Escherichia coli KO11FL 11779571 YP_005278247.1 CDS EKO11_2581 NC_016902.1 2687275 2688324 R PFAM: Peptidase S49 domain protein; peptidase S49; KEGG: ssn:SSON_1871 putative periplasmic protease; peptidase S49 domain protein complement(2687275..2688324) Escherichia coli KO11FL 11777364 YP_005278248.1 CDS EKO11_2582 NC_016902.1 2688544 2689302 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: eoh:ECO103_1432 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 2688544..2689302 Escherichia coli KO11FL 11777365 YP_005278249.1 CDS EKO11_2583 NC_016902.1 2689299 2689889 D TIGRFAM: cob(I)alamin adenosyltransferase; KEGG: ssn:SSON_1873 cob(I)yrinic acid a,c-diamide adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; cob(I)alamin adenosyltransferase 2689299..2689889 Escherichia coli KO11FL 11779572 YP_005278250.1 CDS EKO11_2584 NC_016902.1 2689929 2690801 R KEGG: sbo:SBO_1797 23S rRNA pseudouridylate synthase B; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; pseudouridine synthase complement(2689929..2690801) Escherichia coli KO11FL 11777366 YP_005278251.1 CDS EKO11_2585 NC_016902.1 2690902 2691522 R KEGG: sbc:SbBS512_E1491 hypothetical protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; Sua5/YciO/YrdC/YwlC family protein complement(2690902..2691522) Escherichia coli KO11FL 11777367 YP_005278252.1 CDS EKO11_2586 NC_016902.1 2691519 2692400 R KEGG: eoh:ECO103_1428 hypothetical protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; PHP domain-containing protein complement(2691519..2692400) Escherichia coli KO11FL 11779573 YP_005278253.1 CDS EKO11_2587 NC_016902.1 2692673 2694235 D KEGG: eoh:ECO103_1426 anthranilate synthase component I; TIGRFAM: anthranilate synthase component I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; anthranilate synthase component I 2692673..2694235 Escherichia coli KO11FL 11777368 YP_005278254.1 CDS EKO11_2588 NC_016902.1 2694235 2695830 D KEGG: ebd:ECBD_2359 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; TIGRFAM: anthranilate phosphoribosyltransferase; glutamine amidotransferase of anthranilate synthase; PFAM: glycosyl transferase family 3; glutamine amidotransferase class-I; Glycosyl transferase, family 3-like; anthranilate phosphoribosyltransferase 2694235..2695830 Escherichia coli KO11FL 11777369 YP_005278255.1 CDS EKO11_2589 NC_016902.1 2695834 2697192 D KEGG: ebd:ECBD_2360 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase; PFAM: Indole-3-glycerol phosphate synthase; N-(5'phosphoribosyl)anthranilate isomerase (PRAI); Indole-3-glycerol-phosphate synthase., Phosphoribosylanthranilate isomerase 2695834..2697192 Escherichia coli KO11FL 11777370 YP_005278256.1 CDS EKO11_2590 NC_016902.1 2697204 2698397 D KEGG: sfv:SFV_1275 tryptophan synthase subunit beta; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; tryptophan synthase subunit beta 2697204..2698397 Escherichia coli KO11FL 11777371 YP_005278257.1 CDS EKO11_2591 NC_016902.1 2698397 2699203 D KEGG: eoh:ECO103_1422 tryptophan synthase subunit alpha; TIGRFAM: tryptophan synthase, alpha subunit; PFAM: tryptophan synthase alpha chain; tryptophan synthase subunit alpha 2698397..2699203 Escherichia coli KO11FL 11777372 YP_005278258.1 CDS EKO11_2592 NC_016902.1 2699584 2699763 D PFAM: Stress-induced protein, KGG, repeat; KEGG: sfv:SFV_1273 hypothetical protein; Stress-induced protein, KGG, repeat 2699584..2699763 Escherichia coli KO11FL 11777373 YP_005278259.1 CDS EKO11_2593 NC_016902.1 2699849 2700349 D PFAM: protein of unknown function DUF892; KEGG: eok:G2583_1597 YciF protein; hypothetical protein 2699849..2700349 Escherichia coli KO11FL 11777374 YP_005278260.1 CDS EKO11_2594 NC_016902.1 2700395 2700901 D PFAM: protein of unknown function DUF892; KEGG: eoh:ECO103_1419 hypothetical protein; hypothetical protein 2700395..2700901 Escherichia coli KO11FL 11777375 YP_005278261.1 CDS EKO11_2595 NC_016902.1 2700961 2701599 R PFAM: OmpW family protein; KEGG: sbo:SBO_1809 outer membrane protein W; OmpW family protein complement(2700961..2701599) Escherichia coli KO11FL 11777376 YP_005278262.1 CDS EKO11_2596 NC_016902.1 2701956 2702699 D PFAM: protein of unknown function UPF0259; KEGG: ssn:SSON_1911 hypothetical protein; hypothetical protein 2701956..2702699 Escherichia coli KO11FL 11777377 YP_005278263.1 CDS EKO11_2597 NC_016902.1 2702729 2703268 D KEGG: sbc:SbBS512_E1423 intracellular septation protein A; TIGRFAM: intracellular septation protein A; PFAM: Intracellular septation protein A; intracellular septation protein A 2702729..2703268 Escherichia coli KO11FL 11777378 YP_005278264.1 CDS EKO11_2598 NC_016902.1 2703373 2703771 D PFAM: thioesterase superfamily protein; KEGG: sdy:SDY_1317 acyl-CoA thioester hydrolase; thioesterase superfamily protein 2703373..2703771 Escherichia coli KO11FL 11777379 YP_005278265.1 CDS EKO11_2599 NC_016902.1 2703811 2704545 R KEGG: ebd:ECBD_2370 transport protein TonB; TIGRFAM: TonB family protein; PFAM: TonB domain; TonB family protein complement(2703811..2704545) Escherichia coli KO11FL 11777380 YP_005278266.1 CDS EKO11_2600 NC_016902.1 2704754 2705050 D PFAM: YCII-related; KEGG: sbo:SBO_1814 YciI-like protein; hypothetical protein 2704754..2705050 Escherichia coli KO11FL 11777381 YP_005278267.1 CDS EKO11_2601 NC_016902.1 2705350 2706603 D PFAM: TrkA-N domain protein; Ion transport 2 domain protein; KEGG: sbo:SBO_1817 voltage-gated potassium channel; TrkA-N domain-containing protein 2705350..2706603 Escherichia coli KO11FL 11777382 YP_005278268.1 CDS EKO11_2602 NC_016902.1 2706658 2706831 R manually curated; KEGG: eok:G2583_1522 hypothetical protein; hypothetical protein complement(2706658..2706831) Escherichia coli KO11FL 11777383 YP_005278269.1 CDS EKO11_2603 NC_016902.1 2706974 2708434 D KEGG: ssn:SSON_1931 cardiolipin synthetase; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; phospholipase D/Transphosphatidylase 2706974..2708434 Escherichia coli KO11FL 11779574 YP_005278270.1 CDS EKO11_2604 NC_016902.1 2708469 2708798 D PFAM: protein of unknown function DUF440; KEGG: sdy:SDY_1306 dsDNA-mimic protein; hypothetical protein 2708469..2708798 Escherichia coli KO11FL 11777384 YP_005278271.1 CDS EKO11_2605 NC_016902.1 2708851 2709855 R TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: sfv:SFV_1259 ATP-binding protein of oligopeptide ABC transport system; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(2708851..2709855) Escherichia coli KO11FL 11777385 YP_005278272.1 CDS EKO11_2606 NC_016902.1 2709852 2710865 R TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ebd:ECBD_2376 oligopeptide transporter ATP-binding component; SMART: AAA ATPase; oligopeptide/dipeptide ABC transporter ATPase complement(2709852..2710865) Escherichia coli KO11FL 11779575 YP_005278273.1 CDS EKO11_2607 NC_016902.1 2710877 2711785 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ssn:SSON_1935 oligopeptide transport permease protein-like protein; binding-protein-dependent transport system inner membrane protein complement(2710877..2711785) Escherichia coli KO11FL 11777386 YP_005278274.1 CDS EKO11_2608 NC_016902.1 2711800 2712720 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbo:SBO_1823 oligopeptide transporter permease; binding-protein-dependent transport system inner membrane protein complement(2711800..2712720) Escherichia coli KO11FL 11777387 YP_005278275.1 CDS EKO11_2609 NC_016902.1 2712806 2714437 R PFAM: extracellular solute-binding protein family 5; KEGG: sbo:SBO_1824 oligopeptide transport periplasmic binding protein; family 5 extracellular solute-binding protein complement(2712806..2714437) Escherichia coli KO11FL 11777388 YP_005278276.1 CDS EKO11_2610 NC_016902.1 2714721 2715017 D manually curated; KEGG: ebd:ECBD_2380 hypothetical protein; hypothetical protein 2714721..2715017 Escherichia coli KO11FL 11777389 YP_005278277.1 CDS EKO11_2611 NC_016902.1 2714993 2715148 R KEGG: ebd:ECBD_2381 hypothetical protein; hypothetical protein complement(2714993..2715148) Escherichia coli KO11FL 11777390 YP_005278278.1 CDS EKO11_2612 NC_016902.1 2715175 2715822 R PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: ssn:SSON_1938 hypothetical protein; multiple antibiotic resistance (MarC)-like protein complement(2715175..2715822) Escherichia coli KO11FL 11777391 YP_005278279.1 CDS EKO11_2613 NC_016902.1 2716299 2718974 D PFAM: iron-containing alcohol dehydrogenase; Aldehyde Dehydrogenase; KEGG: sdy:SDY_1295 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; iron-containing alcohol dehydrogenase 2716299..2718974 Escherichia coli KO11FL 11777392 YP_005278280.1 CDS EKO11_2614 NC_016902.1 2719276 2719893 R KEGG: sbo:SBO_1831 thymidine kinase; PFAM: thymidine kinase; thymidine kinase complement(2719276..2719893) Escherichia coli KO11FL 11777393 YP_005278281.1 CDS EKO11_2615 NC_016902.1 2720498 2720911 D KEGG: sdy:SDY_1289 global DNA-binding transcriptional dual regulator H-NS; PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS; histone family protein nucleoid-structuring protein H-NS 2720498..2720911 Escherichia coli KO11FL 11777394 YP_005278282.1 CDS EKO11_2616 NC_016902.1 2721055 2721963 R KEGG: sdy:SDY_1288 UTP--glucose-1-phosphate uridylyltransferase subunit GalU; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; UTP-glucose-1-phosphate uridylyltransferase complement(2721055..2721963) Escherichia coli KO11FL 11777395 YP_005278283.1 CDS EKO11_2617 NC_016902.1 2722165 2723178 R KEGG: eoi:ECO111_1563 response regulator of RpoS; PFAM: response regulator receiver; SMART: response regulator receiver; response regulator receiver protein complement(2722165..2723178) Escherichia coli KO11FL 11777396 YP_005278284.1 CDS EKO11_2618 NC_016902.1 2723270 2724214 R PFAM: Patatin; KEGG: eok:G2583_1508 phospholipase, patatin family; patatin complement(2723270..2724214) Escherichia coli KO11FL 11777397 YP_005278285.1 CDS EKO11_2619 NC_016902.1 2724288 2724746 D PFAM: SEC-C motif domain protein; KEGG: sbc:SbBS512_E1398 hypothetical protein; SEC-C motif domain-containing protein 2724288..2724746 Escherichia coli KO11FL 11777398 YP_005278286.1 CDS EKO11_2620 NC_016902.1 2724796 2725638 D KEGG: sbo:SBO_1837 formyltetrahydrofolate deformylase; TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid-binding ACT domain protein; formyltetrahydrofolate deformylase 2724796..2725638 Escherichia coli KO11FL 11777399 YP_005278287.1 CDS EKO11_2621 NC_016902.1 2726002 2726181 R manually curated; KEGG: eoh:ECO103_1333 hypothetical protein; hypothetical protein complement(2726002..2726181) Escherichia coli KO11FL 11777402 YP_005278288.1 CDS EKO11_2622 NC_016902.1 2726364 2727041 R TIGRFAM: respiratory nitrate reductase, gamma subunit; KEGG: sbc:SbBS512_E1395 respiratory nitrate reductase 1, gamma subunit; PFAM: Nitrate reductase gamma subunit; respiratory nitrate reductase subunit gamma complement(2726364..2727041) Escherichia coli KO11FL 11777403 YP_005278289.1 CDS EKO11_2623 NC_016902.1 2727041 2727751 R TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; KEGG: sbc:SbBS512_E1394 nitrate reductase molybdenum cofactor assembly chaperone 1; PFAM: TorD-like chaperone; nitrate reductase molybdenum cofactor assembly chaperone complement(2727041..2727751) Escherichia coli KO11FL 11779576 YP_005278290.1 CDS EKO11_2624 NC_016902.1 2727748 2729286 R TIGRFAM: nitrate reductase, beta subunit; KEGG: sbo:SBO_1841 nitrate reductase 1 beta subunit; nitrate reductase subunit beta complement(2727748..2729286) Escherichia coli KO11FL 11777404 YP_005278291.1 CDS EKO11_2625 NC_016902.1 2729283 2733026 R KEGG: eoh:ECO103_1329 nitrate reductase 1, alpha subunit; TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; nitrate reductase subunit alpha complement(2729283..2733026) Escherichia coli KO11FL 11777405 YP_005278292.1 CDS EKO11_2626 NC_016902.1 2733542 2734933 R KEGG: sbc:SbBS512_E1391 nitrite extrusion protein 1; TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1; nitrite transporter complement(2733542..2734933) Escherichia coli KO11FL 11779577 YP_005278293.1 CDS EKO11_2627 NC_016902.1 2735028 2735246 R KEGG: sbc:SbBS512_E1390 hypothetical protein; hypothetical protein complement(2735028..2735246) Escherichia coli KO11FL 11777406 YP_005278294.1 CDS EKO11_2628 NC_016902.1 2735272 2737068 D KEGG: sfv:SFV_1238 nitrate/nitrite sensor protein NarX; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; integral membrane sensor signal transduction histidine kinase 2735272..2737068 Escherichia coli KO11FL 11777407 YP_005278295.1 CDS EKO11_2629 NC_016902.1 2737061 2737711 D KEGG: sdy:SDY_1275 transcriptional regulator NarL; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; two component transcriptional regulator, LuxR family 2737061..2737711 Escherichia coli KO11FL 11779578 YP_005278296.1 CDS EKO11_2630 NC_016902.1 2737712 2739106 R KEGG: eoh:ECO103_1325 hypothetical protein; hypothetical protein complement(2737712..2739106) Escherichia coli KO11FL 11777408 YP_005278297.1 CDS EKO11_2631 NC_016902.1 2739291 2739644 D PFAM: DsrE family protein; KEGG: sdy:SDY_1271 hypothetical protein; DsrE family protein 2739291..2739644 Escherichia coli KO11FL 11777409 YP_005278298.1 CDS EKO11_2632 NC_016902.1 2739684 2740403 R PFAM: ChaC family protein; KEGG: sbc:SbBS512_E1385 ChaC protein; ChaC family protein complement(2739684..2740403) Escherichia coli KO11FL 11777410 YP_005278299.1 CDS EKO11_2633 NC_016902.1 2740540 2740770 R PFAM: ChaB family protein; KEGG: sdy:SDY_1269 cation transport regulator; ChaB family protein complement(2740540..2740770) Escherichia coli KO11FL 11777411 YP_005278300.1 CDS EKO11_2634 NC_016902.1 2740953 2742140 D manually curated; TIGRFAM: calcium/proton exchanger; KEGG: sfv:SFV_1232 calcium/sodium:proton antiporter; PFAM: sodium/calcium exchanger membrane region; calcium/proton exchanger 2740953..2742140 Escherichia coli KO11FL 11777412 YP_005278301.1 CDS EKO11_2636 NC_016902.1 2742545 2742652 D KEGG: ebr:ECB_01193 toxic polypeptide, small; toxic polypeptide, small 2742545..2742652 Escherichia coli KO11FL 11777414 YP_005278302.1 CDS EKO11_2639 NC_016902.1 2743872 2744726 R KEGG: sdy:SDY_1264 2-dehydro-3-deoxyphosphooctonate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA; 2-dehydro-3-deoxyphosphooctonate aldolase complement(2743872..2744726) Escherichia coli KO11FL 11777417 YP_005278303.1 CDS EKO11_2640 NC_016902.1 2744762 2745571 R KEGG: sbc:SbBS512_E1378 putative transcriptional regulator; putative transcriptional regulator complement(2744762..2745571) Escherichia coli KO11FL 11777418 YP_005278304.1 CDS EKO11_2641 NC_016902.1 2745575 2745967 R PFAM: Invasion gene expression up-regulator SirB; KEGG: sdy:SDY_1262 putative transcriptional regulator; Invasion gene expression up-regulator SirB complement(2745575..2745967) Escherichia coli KO11FL 11777419 YP_005278305.1 CDS EKO11_2642 NC_016902.1 2745964 2746797 R KEGG: ssn:SSON_1966 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; PFAM: methyltransferase small; protein-(glutamine-N5) methyltransferase complement(2745964..2746797) Escherichia coli KO11FL 11777420 YP_005278306.1 CDS EKO11_2643 NC_016902.1 2746797 2747879 R KEGG: sdy:SDY_1260 peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein; peptide chain release factor 1 complement(2746797..2747879) Escherichia coli KO11FL 11779579 YP_005278307.1 CDS EKO11_2644 NC_016902.1 2747921 2749246 R manually curated; TIGRFAM: glutamyl-tRNA reductase; KEGG: sfv:SFV_1224 glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; Shikimate/quinate 5-dehydrogenase; glutamyl-tRNA reductase complement(2747921..2749246) Escherichia coli KO11FL 11777421 YP_005278308.1 CDS EKO11_2645 NC_016902.1 2749325 2750014 D manually curated; TIGRFAM: outer membrane lipoprotein LolB; KEGG: sbo:SBO_1858 outer membrane lipoprotein LolB; PFAM: outer membrane lipoprotein LolB; outer membrane lipoprotein LolB 2749325..2750014 Escherichia coli KO11FL 11777422 YP_005278309.1 CDS EKO11_2646 NC_016902.1 2750014 2750865 D TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: sbc:SbBS512_E1372 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 2750014..2750865 Escherichia coli KO11FL 11777423 YP_005278310.1 CDS EKO11_2647 NC_016902.1 2751016 2751963 D TIGRFAM: ribose-phosphate pyrophosphokinase; KEGG: ebd:ECBD_2414 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; ribose-phosphate pyrophosphokinase 2751016..2751963 Escherichia coli KO11FL 11777424 YP_005278311.1 CDS EKO11_2648 NC_016902.1 2752115 2753767 D KEGG: sdy:SDY_1255 putative sulfate transporter YchM; TIGRFAM: sulfate transporter; PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS; sulfate transporter 2752115..2753767 Escherichia coli KO11FL 11777425 YP_005278312.1 CDS EKO11_2649 NC_016902.1 2753822 2754100 R PFAM: Protein of unknown function DUF2583; KEGG: sbc:SbBS512_E1369 hypothetical protein; hypothetical protein complement(2753822..2754100) Escherichia coli KO11FL 11777426 YP_005278313.1 CDS EKO11_2650 NC_016902.1 2754378 2754962 D TIGRFAM: peptidyl-tRNA hydrolase; KEGG: ssn:SSON_1974 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 2754378..2754962 Escherichia coli KO11FL 11777427 YP_005278314.1 CDS EKO11_2651 NC_016902.1 2755079 2756170 D KEGG: sdy:SDY_1252 GTP-dependent nucleic acid-binding protein EngD; TIGRFAM: GTP-binding protein YchF; PFAM: protein of unknown function DUF933; GTP-binding protein HSR1-related; GTP-binding protein YchF 2755079..2756170 Escherichia coli KO11FL 11777428 YP_005278315.1 CDS EKO11_2652 NC_016902.1 2756463 2756666 R manually curated; KEGG: ssn:SSON_1976 hypothetical protein; hypothetical protein complement(2756463..2756666) Escherichia coli KO11FL 11777429 YP_005278316.1 CDS EKO11_2653 NC_016902.1 2757011 2759896 D KEGG: eoi:ECO111_1531 putative adhesin; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Pertactin; Autotransporter beta- domain protein; outer membrane autotransporter barrel domain-containing protein 2757011..2759896 Escherichia coli KO11FL 11777430 YP_005278317.1 CDS EKO11_2654 NC_016902.1 2759996 2761915 R KEGG: ebd:ECBD_2421 DNA-binding transcriptional regulator DhaR; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; GAF domain protein; helix-turn-helix Fis-type; SMART: PAS domain containing protein; AAA ATPase; GAF modulated Fis family sigma-54 specific transcriptional regulator complement(2759996..2761915) Escherichia coli KO11FL 11777431 YP_005278318.1 CDS EKO11_2655 NC_016902.1 2762143 2763213 D TIGRFAM: dihydroxyacetone kinase, DhaK subunit; KEGG: eoi:ECO111_1529 dihydroxyacetone kinase subunit DhaK; PFAM: Dak kinase; dihydroxyacetone kinase subunit DhaK 2762143..2763213 Escherichia coli KO11FL 11777432 YP_005278319.1 CDS EKO11_2656 NC_016902.1 2763224 2763856 D KEGG: eoh:ECO103_1301 dihydroxyacetone kinase subunit DhaL; TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; dihydroxyacetone kinase subunit DhaL 2763224..2763856 Escherichia coli KO11FL 11777433 YP_005278320.1 CDS EKO11_2657 NC_016902.1 2763867 2765285 D KEGG: eoi:ECO111_1527 dihydroxyacetone kinase subunit M; TIGRFAM: dihydroxyacetone kinase, phosphotransfer subunit; phosphocarrier, HPr family; PFAM: PEP-utilising protein domain protein; PTS system fructose subfamily IIA component; phosphoryl transfer system HPr; PEP-utilising protein mobile region; dihydroxyacetone kinase, phosphotransfer subunit 2763867..2765285 Escherichia coli KO11FL 11777434 YP_005278321.1 CDS EKO11_2658 NC_016902.1 2765605 2767302 D KEGG: eoh:ECO103_1299 trehalase; PFAM: glycoside hydrolase family 37; Alpha,alpha-trehalase 2765605..2767302 Escherichia coli KO11FL 11777435 YP_005278322.1 CDS EKO11_2659 NC_016902.1 2767381 2767821 R manually curated; KEGG: ebd:ECBD_2426 hypothetical protein; hypothetical protein complement(2767381..2767821) Escherichia coli KO11FL 11777436 YP_005278323.1 CDS EKO11_2660 NC_016902.1 2767999 2768253 R PFAM: Transglycosylase-associated protein; KEGG: ebd:ECBD_2427 transglycosylase-associated protein; transglycosylase complement(2767999..2768253) Escherichia coli KO11FL 11777437 YP_005278324.1 CDS EKO11_2661 NC_016902.1 2768454 2769188 D PFAM: YcgR family protein; type IV pilus assembly PilZ; KEGG: sbo:SBO_1878 hypothetical protein; YcgR family protein 2768454..2769188 Escherichia coli KO11FL 11777438 YP_005278325.1 CDS EKO11_2662 NC_016902.1 2769190 2769801 R PFAM: Lytic transglycosylase catalytic; KEGG: sbc:SbBS512_E1351 membrane-bound lytic murein transglycosylase E; lytic transglycosylase complement(2769190..2769801) Escherichia coli KO11FL 11777439 YP_005278326.1 CDS EKO11_2663 NC_016902.1 2769901 2770815 D KEGG: eoh:ECO103_1294 L,D-carboxypeptidase A; PFAM: peptidase U61 LD-carboxypeptidase A; Muramoyltetrapeptide carboxypeptidase 2769901..2770815 Escherichia coli KO11FL 11777440 YP_005278327.1 CDS EKO11_2664 NC_016902.1 2770910 2772646 D PFAM: sodium/hydrogen exchanger; TrkA-C domain protein; transporter-associated region; KEGG: sbc:SbBS512_E1349 potassium/proton antiporter; sodium/hydrogen exchanger 2770910..2772646 Escherichia coli KO11FL 11777441 YP_005278328.1 CDS EKO11_2665 NC_016902.1 2772780 2772929 R hypothetical protein complement(2772780..2772929) Escherichia coli KO11FL 11777442 YP_005278329.1 CDS EKO11_2666 NC_016902.1 2773032 2774102 R TIGRFAM: alanine racemase; KEGG: eoh:ECO103_1292 alanine racemase; PFAM: alanine racemase domain protein; alanine racemase complement(2773032..2774102) Escherichia coli KO11FL 11777443 YP_005278330.1 CDS EKO11_2667 NC_016902.1 2774112 2775410 R PFAM: FAD dependent oxidoreductase; KEGG: ssn:SSON_1181 D-amino acid dehydrogenase small subunit; FAD dependent oxidoreductase complement(2774112..2775410) Escherichia coli KO11FL 11779580 YP_005278331.1 CDS EKO11_2668 NC_016902.1 2775740 2777272 D PFAM: SpoVR family protein; KEGG: ebd:ECBD_2434 SpoVR family protein; SpoVR family protein 2775740..2777272 Escherichia coli KO11FL 11777444 YP_005278332.1 CDS EKO11_2669 NC_016902.1 2777324 2778043 R TIGRFAM: fatty acid metabolism transcriptional regulator FadR; PFAM: fatty acid responsive transcription factor FadR domain protein; regulatory protein GntR HTH; KEGG: sdy:SDY_1224 fatty acid metabolism regulator; SMART: regulatory protein GntR HTH; fatty acid metabolism transcriptional regulator FadR complement(2777324..2778043) Escherichia coli KO11FL 11777445 YP_005278333.1 CDS EKO11_2670 NC_016902.1 2778264 2779805 D KEGG: sdy:SDY_1223 sodium/proton antiporter; TIGRFAM: Na+/H+ antiporter NhaB; PFAM: Na+H+ antiporter NhaB; Na+/H+ antiporter NhaB 2778264..2779805 Escherichia coli KO11FL 11777446 YP_005278334.1 CDS EKO11_2671 NC_016902.1 2779951 2780481 D PFAM: Disulphide bond formation protein DsbB; KEGG: sfv:SFV_1192 disulfide bond formation protein B; disulfide bond formation protein DsbB 2779951..2780481 Escherichia coli KO11FL 11777447 YP_005278335.1 CDS EKO11_2672 NC_016902.1 2780527 2781795 R KEGG: ebd:ECBD_2438 DNA polymerase V subunit UmuC; PFAM: UMUC domain protein DNA-repair protein; DNA-directed DNA polymerase complement(2780527..2781795) Escherichia coli KO11FL 11777448 YP_005278336.1 CDS EKO11_2673 NC_016902.1 2781795 2782214 R PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: sbc:SbBS512_E1340 DNA polymerase V subunit UmuD; peptidase S24/S26A/S26B complement(2781795..2782214) Escherichia coli KO11FL 11777449 YP_005278337.1 CDS EKO11_2675 NC_016902.1 2783703 2784179 R KEGG: eok:G2583_1441 hypothetical protein; manually curated; PFAM: protein of unknown function UPF0153; hypothetical protein complement(2783703..2784179) Escherichia coli KO11FL 11777451 YP_005278338.1 CDS EKO11_2676 NC_016902.1 2784241 2784900 R PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: sbc:SbBS512_E1335 hypothetical protein; fumarylacetoacetate (FAA) hydrolase complement(2784241..2784900) Escherichia coli KO11FL 11777452 YP_005278339.1 CDS EKO11_2677 NC_016902.1 2784972 2785298 R KEGG: sbo:SBO_1165 hypothetical protein; manually curated; PFAM: protein of unknown function DUF709; hypothetical protein complement(2784972..2785298) Escherichia coli KO11FL 11777453 YP_005278340.1 CDS EKO11_2678 NC_016902.1 2785507 2785908 D PFAM: peptidase domain protein; KEGG: ssn:SSON_1167 hypothetical protein; peptidase domain-containing protein 2785507..2785908 Escherichia coli KO11FL 11777454 YP_005278341.1 CDS EKO11_2679 NC_016902.1 2786028 2786396 R PFAM: Fels-1 Propage domain protein; KEGG: sbc:SbBS512_E1331 putative fels-1 prophage protein; Fels-1 Propage domain protein complement(2786028..2786396) Escherichia coli KO11FL 11777455 YP_005278342.1 CDS EKO11_2680 NC_016902.1 2786916 2787611 D KEGG: sdy:SDY_1207 septum formation inhibitor; TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC; septum site-determining protein MinC 2786916..2787611 Escherichia coli KO11FL 11777456 YP_005278343.1 CDS EKO11_2681 NC_016902.1 2787635 2788447 D TIGRFAM: septum site-determining protein MinD; KEGG: sdy:SDY_1206 cell division inhibitor MinD; septum site-determining protein MinD 2787635..2788447 Escherichia coli KO11FL 11777457 YP_005278344.1 CDS EKO11_2682 NC_016902.1 2788451 2788717 D KEGG: sdy:SDY_1205 cell division topological specificity factor MinE; TIGRFAM: cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE; cell division topological specificity factor MinE 2788451..2788717 Escherichia coli KO11FL 11779581 YP_005278345.1 CDS EKO11_2683 NC_016902.1 2789089 2789532 R KEGG: eoh:ECO103_1274 hypothetical protein; manually curated; PFAM: Autotransporter beta- domain protein; Autotransporter beta domain-containing protein complement(2789089..2789532) Escherichia coli KO11FL 11777458 YP_005278346.1 CDS EKO11_2684 NC_016902.1 2789834 2790007 D manually curated; KEGG: eok:G2583_1430 hypothetical protein; hypothetical protein 2789834..2790007 Escherichia coli KO11FL 11777459 YP_005278347.1 CDS EKO11_2685 NC_016902.1 2790069 2790353 D KEGG: sbc:SbBS512_E1325 hypothetical protein; hypothetical protein 2790069..2790353 Escherichia coli KO11FL 11777460 YP_005278348.1 CDS EKO11_2686 NC_016902.1 2790363 2790692 D KEGG: sbc:SbBS512_E1324 hypothetical protein; hypothetical protein 2790363..2790692 Escherichia coli KO11FL 11777461 YP_005278349.1 CDS EKO11_2688 NC_016902.1 2793796 2794014 R KEGG: ebd:ECBD_2453 uncharacterized protein YmgF; hypothetical protein complement(2793796..2794014) Escherichia coli KO11FL 11777462 YP_005278350.1 CDS EKO11_2689 NC_016902.1 2794146 2795669 R KEGG: eoh:ECO103_1269 hypothetical protein; PFAM: EAL domain protein; SMART: EAL domain protein; diguanylate phosphodiesterase complement(2794146..2795669) Escherichia coli KO11FL 11777463 YP_005278351.1 CDS EKO11_2690 NC_016902.1 2796001 2796249 R KEGG: ebd:ECBD_2455 uncharacterized protein YmgC; hypothetical protein complement(2796001..2796249) Escherichia coli KO11FL 11779583 YP_005278352.1 CDS EKO11_2691 NC_016902.1 2796362 2796628 R KEGG: ebd:ECBD_2456 hypothetical protein; hypothetical protein complement(2796362..2796628) Escherichia coli KO11FL 11777464 YP_005278353.1 CDS EKO11_2692 NC_016902.1 2796657 2796929 R manually curated; KEGG: eoh:ECO103_1266 hypothetical protein; hypothetical protein complement(2796657..2796929) Escherichia coli KO11FL 11777465 YP_005278354.1 CDS EKO11_2693 NC_016902.1 2796972 2797208 R KEGG: eoh:ECO103_1265 hypothetical protein; hypothetical protein complement(2796972..2797208) Escherichia coli KO11FL 11777466 YP_005278355.1 CDS EKO11_2694 NC_016902.1 2797522 2798733 D KEGG: eoh:ECO103_1264 putative FAD-binding phosphodiesterase; PFAM: EAL domain protein; BLUF domain protein; SMART: EAL domain protein; diguanylate phosphodiesterase 2797522..2798733 Escherichia coli KO11FL 11777467 YP_005278356.1 CDS EKO11_2695 NC_016902.1 2798938 2799669 D KEGG: sbc:SbBS512_E1317 transcriptional regulator MlrA; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; MerR family transcriptional regulator 2798938..2799669 Escherichia coli KO11FL 11779584 YP_005278357.1 CDS EKO11_2696 NC_016902.1 2799890 2800294 D PFAM: protein of unknown function DUF1398; KEGG: ebd:ECBD_2461 protein of unknown function DUF1398; hypothetical protein 2799890..2800294 Escherichia coli KO11FL 11777468 YP_005278358.1 CDS EKO11_2697 NC_016902.1 2800990 2801313 D manually curated; KEGG: eoh:ECO103_1261 hypothetical protein; hypothetical protein 2800990..2801313 Escherichia coli KO11FL 11777469 YP_005278359.1 CDS EKO11_2698 NC_016902.1 2801416 2802666 R TIGRFAM: isocitrate dehydrogenase, NADP-dependent; KEGG: sfv:SFV_1171 isocitrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; isocitrate dehydrogenase complement(2801416..2802666) Escherichia coli KO11FL 11777470 YP_005278360.1 CDS EKO11_2699 NC_016902.1 2802838 2803491 D PFAM: pseudouridine synthase; KEGG: eoh:ECO103_1259 23S rRNA pseudouridine synthase E; pseudouridine synthase 2802838..2803491 Escherichia coli KO11FL 11777471 YP_005278361.1 CDS EKO11_2700 NC_016902.1 2803501 2803962 D PFAM: NUDIX hydrolase; KEGG: sdy:SDY_2018 putative phosphohydrolase; NUDIX hydrolase 2803501..2803962 Escherichia coli KO11FL 11777472 YP_005278362.1 CDS EKO11_2701 NC_016902.1 2804016 2805122 D TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; KEGG: ebd:ECBD_2466 tRNA-specific 2-thiouridylase MnmA; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase 2804016..2805122 Escherichia coli KO11FL 11779585 YP_005278363.1 CDS EKO11_2702 NC_016902.1 2805158 2805799 D PFAM: protein of unknown function DUF489; KEGG: sdy:SDY_2020 hypothetical protein; hypothetical protein 2805158..2805799 Escherichia coli KO11FL 11777473 YP_005278364.1 CDS EKO11_2703 NC_016902.1 2805803 2807173 D KEGG: sbc:SbBS512_E1309 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase domain-containing protein; adenylosuccinate lyase 2805803..2807173 Escherichia coli KO11FL 11777474 YP_005278365.1 CDS EKO11_2704 NC_016902.1 2807341 2808012 D KEGG: sdy:SDY_2022 DNA-binding transcriptional regulator PhoP; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; two component transcriptional regulator, winged helix family 2807341..2808012 Escherichia coli KO11FL 11777475 YP_005278366.1 CDS EKO11_2705 NC_016902.1 2808012 2809472 D KEGG: sbc:SbBS512_E1307 sensor protein PhoQ; PFAM: PhoQ Sensor domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; integral membrane sensor signal transduction histidine kinase 2808012..2809472 Escherichia coli KO11FL 11777476 YP_005278367.1 CDS EKO11_2706 NC_016902.1 2809548 2810669 D SMART: transcription factor jumonji jmjC domain-containing protein; KEGG: eoh:ECO103_1235 putative cytoplasmic protein; transcription factor jumonji jmjC domain-containing protein 2809548..2810669 Escherichia coli KO11FL 11777477 YP_005278368.1 CDS EKO11_2707 NC_016902.1 2810815 2812044 R TIGRFAM: peptidase T; KEGG: eoi:ECO111_1475 peptidase T; PFAM: peptidase dimerisation domain protein; peptidase M20; peptidase T complement(2810815..2812044) Escherichia coli KO11FL 11777478 YP_005278369.1 CDS EKO11_2708 NC_016902.1 2812294 2813430 D TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; KEGG: sfx:S1208 putrescine/spermidine ABC transporter ATPase protein; SMART: AAA ATPase; spermidine/putrescine ABC transporter ATPase 2812294..2813430 Escherichia coli KO11FL 11777479 YP_005278370.1 CDS EKO11_2709 NC_016902.1 2813414 2814271 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ssn:SSON_1143 spermidine/putrescine ABC transporter membrane protein; binding-protein-dependent transport system inner membrane protein 2813414..2814271 Escherichia coli KO11FL 11777480 YP_005278371.1 CDS EKO11_2710 NC_016902.1 2814268 2815062 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbc:SbBS512_E2201 spermidine/putrescine ABC transporter membrane protein; binding-protein-dependent transport system inner membrane protein 2814268..2815062 Escherichia coli KO11FL 11779586 YP_005278372.1 CDS EKO11_2711 NC_016902.1 2815059 2816105 D PFAM: extracellular solute-binding protein family 1; KEGG: eoh:ECO103_1168 spermidine/putrescine ABC transporter periplasmic substrate-binding protein; extracellular solute-binding protein 2815059..2816105 Escherichia coli KO11FL 11777481 YP_005278373.1 CDS EKO11_2712 NC_016902.1 2816163 2816624 D KEGG: eoh:ECO103_1167 putative inner membrane protein; putative inner membrane protein 2816163..2816624 Escherichia coli KO11FL 11777482 YP_005278374.1 CDS EKO11_2713 NC_016902.1 2816621 2817409 D KEGG: eoh:ECO103_1166 putative inner membrane protein; putative inner membrane protein 2816621..2817409 Escherichia coli KO11FL 11777483 YP_005278375.1 CDS EKO11_2714 NC_016902.1 2817548 2818369 R PFAM: Silent information regulator protein Sir2; KEGG: sbo:SBO_1941 NAD-dependent deacetylase; silent information regulator protein Sir2 complement(2817548..2818369) Escherichia coli KO11FL 11777484 YP_005278376.1 CDS EKO11_2715 NC_016902.1 2818385 2819296 R PFAM: ROK family protein; KEGG: sdy:SDY_2031 N-acetyl-D-glucosamine kinase; ROK family protein complement(2818385..2819296) Escherichia coli KO11FL 11777485 YP_005278377.1 CDS EKO11_2716 NC_016902.1 2819325 2820563 R KEGG: eoh:ECO103_1163 outer membrane-specific lipoprotein transporter subunit LolE; TIGRFAM: lipoprotein releasing system, transmembrane protein LolE; lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; lipoprotein releasing system, transmembrane protein LolE complement(2819325..2820563) Escherichia coli KO11FL 11777486 YP_005278378.1 CDS EKO11_2717 NC_016902.1 2820569 2821270 R TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; KEGG: sbc:SbBS512_E2206 lipoprotein transporter ATP-binding subunit; SMART: AAA ATPase; lipoprotein releasing system, ATP-binding protein complement(2820569..2821270) Escherichia coli KO11FL 11777487 YP_005278379.1 CDS EKO11_2718 NC_016902.1 2821263 2822462 R KEGG: eoh:ECO103_1161 outer membrane-specific lipoprotein transporter subunit LolC; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214; lipoprotein releasing system transmembrane protein LolC/E family complement(2821263..2822462) Escherichia coli KO11FL 11777488 YP_005278380.1 CDS EKO11_2719 NC_016902.1 2822724 2823797 D PFAM: acyltransferase 3; KEGG: ebw:BWG_0963 putative inner membrane protein; acyltransferase 3 2822724..2823797 Escherichia coli KO11FL 11777489 YP_005278381.1 CDS EKO11_2720 NC_016902.1 2823877 2827371 D TIGRFAM: transcription-repair coupling factor; PFAM: TRCF domain protein; transcription factor CarD; DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: sfv:SFV_1134 transcription-repair coupling factor; SMART: DEAD-like helicase ; helicase domain protein; transcription-repair coupling factor 2823877..2827371 Escherichia coli KO11FL 11777490 YP_005278382.1 CDS EKO11_2721 NC_016902.1 2827518 2828477 D KEGG: eoh:ECO103_1158 hypothetical protein; PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; ErfK/YbiS/YcfS/YnhG family protein 2827518..2828477 Escherichia coli KO11FL 11779587 YP_005278383.1 CDS EKO11_2722 NC_016902.1 2828560 2828817 R PFAM: protein of unknown function DUF1471; KEGG: sdy:SDY_2038 hypothetical protein; hypothetical protein complement(2828560..2828817) Escherichia coli KO11FL 11777491 YP_005278384.1 CDS EKO11_2723 NC_016902.1 2828995 2829690 D PFAM: regulatory protein TetR; KEGG: sdy:SDY_2039 hypothetical protein; TetR family transcriptional regulator 2828995..2829690 Escherichia coli KO11FL 11777492 YP_005278385.1 CDS EKO11_2724 NC_016902.1 2829752 2830291 R KEGG: sdy:SDY_2040 hypothetical protein; hypothetical protein complement(2829752..2830291) Escherichia coli KO11FL 11777493 YP_005278386.1 CDS EKO11_2725 NC_016902.1 2830501 2831805 R PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: eoi:ECO111_1386 respiratory NADH dehydrogenase 2/cupric reductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(2830501..2831805) Escherichia coli KO11FL 11777494 YP_005278387.1 CDS EKO11_2726 NC_016902.1 2832213 2832755 R PFAM: protein of unknown function UPF0227; KEGG: sdy:SDY_2042 hypothetical protein; hypothetical protein complement(2832213..2832755) Escherichia coli KO11FL 11777495 YP_005278388.1 CDS EKO11_2727 NC_016902.1 2832778 2833803 R PFAM: glycoside hydrolase family 3 domain protein; KEGG: eoi:ECO111_1384 beta-hexosaminidase; glycoside hydrolase family protein complement(2832778..2833803) Escherichia coli KO11FL 11777496 YP_005278389.1 CDS EKO11_2728 NC_016902.1 2833814 2834638 R TIGRFAM: thiamine kinase; KEGG: eoh:ECO103_1151 thiamine kinase; PFAM: aminoglycoside phosphotransferase; thiamine kinase complement(2833814..2834638) Escherichia coli KO11FL 11777497 YP_005278390.1 CDS EKO11_2729 NC_016902.1 2834619 2835260 R TIGRFAM: membrane lipoprotein lipid attachment site; KEGG: sdy:SDY_2045 hypothetical protein; membrane lipoprotein lipid attachment site complement(2834619..2835260) Escherichia coli KO11FL 11777498 YP_005278391.1 CDS EKO11_2730 NC_016902.1 2835274 2835651 R PFAM: protein of unknown function DUF1425; KEGG: eok:G2583_1364 putative outer membrane lipoprotein YcfL; hypothetical protein complement(2835274..2835651) Escherichia coli KO11FL 11777499 YP_005278392.1 CDS EKO11_2731 NC_016902.1 2835654 2836013 R PFAM: histidine triad (HIT) protein; KEGG: eok:G2583_1363 hypothetical protein; histidine triad (HIT) protein complement(2835654..2836013) Escherichia coli KO11FL 11777500 YP_005278393.1 CDS EKO11_2732 NC_016902.1 2836347 2838536 D KEGG: eoh:ECO103_1147 ferric-rhodotorulic acid outer membrane transporter; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; TonB-dependent siderophore receptor 2836347..2838536 Escherichia coli KO11FL 11777501 YP_005278394.1 CDS EKO11_2733 NC_016902.1 2838596 2840029 R TIGRFAM: PTS system, glucose-specific IIBC subunit; PTS system, maltose and glucose-specific subfamily, IIC subunit; PTS system, glucose-like IIB subunint; KEGG: sdy:SDY_2049 glucose-specific PTS system IIBC components; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; PTS system glucose-specific transporter subunit IIBC complement(2838596..2840029) Escherichia coli KO11FL 11777502 YP_005278395.1 CDS EKO11_2734 NC_016902.1 2840324 2841121 R KEGG: sdy:SDY_2050 putative metallodependent hydrolase; TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; TatD family hydrolase complement(2840324..2841121) Escherichia coli KO11FL 11777503 YP_005278396.1 CDS EKO11_2735 NC_016902.1 2841132 2842136 R KEGG: ebd:ECBD_2502 DNA polymerase III subunit delta'; TIGRFAM: DNA polymerase III, delta prime subunit; PFAM: DNA polymerase III delta subunit; DNA polymerase III subunit delta' complement(2841132..2842136) Escherichia coli KO11FL 11777504 YP_005278397.1 CDS EKO11_2736 NC_016902.1 2842133 2842774 R TIGRFAM: thymidylate kinase; KEGG: sdy:SDY_2052 thymidylate kinase; PFAM: thymidylate kinase; thymidylate kinase complement(2842133..2842774) Escherichia coli KO11FL 11777505 YP_005278398.1 CDS EKO11_2737 NC_016902.1 2842764 2843786 R PFAM: aminodeoxychorismate lyase; KEGG: sbc:SbBS512_E2227 hypothetical protein; aminodeoxychorismate lyase complement(2842764..2843786) Escherichia coli KO11FL 11777506 YP_005278399.1 CDS EKO11_2738 NC_016902.1 2843789 2844598 R KEGG: ebd:ECBD_2505 4-amino-4-deoxychorismate lyase; TIGRFAM: aminodeoxychorismate lyase; PFAM: aminotransferase class IV; aminodeoxychorismate lyase complement(2843789..2844598) Escherichia coli KO11FL 11777507 YP_005278400.1 CDS EKO11_2739 NC_016902.1 2844718 2845959 R KEGG: sfv:SFV_1115 3-oxoacyl-(acyl carrier protein) synthase II; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; 3-oxoacyl-(acyl-carrier-protein) synthase 2 complement(2844718..2845959) Escherichia coli KO11FL 11777508 YP_005278401.1 CDS EKO11_2741 NC_016902.1 2846494 2847228 R KEGG: sbc:SbBS512_E2231 3-ketoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; 3-oxoacyl-(acyl-carrier-protein) reductase complement(2846494..2847228) Escherichia coli KO11FL 11777510 YP_005278402.1 CDS EKO11_2742 NC_016902.1 2847241 2848170 R KEGG: sbc:SbBS512_E2232 malonyl CoA-acyl carrier protein transacylase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; malonyl CoA-acyl carrier protein transacylase complement(2847241..2848170) Escherichia coli KO11FL 11779588 YP_005278403.1 CDS EKO11_2743 NC_016902.1 2848186 2849139 R TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; KEGG: sbc:SbBS512_E2233 3-oxoacyl-(acyl carrier protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-oxoacyl-(acyl-carrier-protein) synthase III complement(2848186..2849139) Escherichia coli KO11FL 11777511 YP_005278404.1 CDS EKO11_2744 NC_016902.1 2849207 2850247 R KEGG: ssn:SSON_1110 putative glycerol-3-phosphate acyltransferase PlsX; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; fatty acid/phospholipid synthesis protein PlsX complement(2849207..2850247) Escherichia coli KO11FL 11777512 YP_005278405.1 CDS EKO11_2745 NC_016902.1 2850358 2850531 R KEGG: cro:ROD_11511 50S ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; 50S ribosomal protein L32 complement(2850358..2850531) Escherichia coli KO11FL 11777513 YP_005278406.1 CDS EKO11_2746 NC_016902.1 2850583 2851104 R PFAM: protein of unknown function DUF177; KEGG: sdy:SDY_2062 hypothetical protein; hypothetical protein complement(2850583..2851104) Escherichia coli KO11FL 11777514 YP_005278407.1 CDS EKO11_2747 NC_016902.1 2851264 2851887 D KEGG: sfv:SFV_1108 Maf-like protein; TIGRFAM: maf protein; PFAM: Maf family protein; maf protein 2851264..2851887 Escherichia coli KO11FL 11777515 YP_005278408.1 CDS EKO11_2748 NC_016902.1 2851999 2852958 R TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: sfx:S1170 23S rRNA pseudouridylate synthase C; SMART: RNA-binding S4 domain protein; RluA family pseudouridine synthase complement(2851999..2852958) Escherichia coli KO11FL 11777516 YP_005278409.1 CDS EKO11_2749 NC_016902.1 2853531 2856716 D KEGG: eoi:ECO111_1361 ribonuclease E; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein; Polyribonucleotide phosphorylase-like; ribonuclease, Rne/Rng family 2853531..2856716 Escherichia coli KO11FL 11777517 YP_005278410.1 CDS EKO11_2750 NC_016902.1 2856913 2857866 R KEGG: eoh:ECO103_1128 flagellar hook-associated protein FlgL; TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; flagellar hook-associated protein 3 complement(2856913..2857866) Escherichia coli KO11FL 11777518 YP_005278411.1 CDS EKO11_2751 NC_016902.1 2857878 2859521 R KEGG: ebd:ECBD_2518 flagellar hook-associated protein FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; flagellar hook-associated protein FlgK complement(2857878..2859521) Escherichia coli KO11FL 11779589 YP_005278412.1 CDS EKO11_2752 NC_016902.1 2859587 2860528 R TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Flagellar protein FlgJ-like; KEGG: ssn:SSON_1101 flagellar rod assembly protein/muramidase FlgJ; SMART: Lysozyme subfamily 2; flagellar rod assembly protein/muramidase FlgJ complement(2859587..2860528) Escherichia coli KO11FL 11777519 YP_005278413.1 CDS EKO11_2753 NC_016902.1 2860528 2861625 R PFAM: flagellar P-ring protein; KEGG: eok:G2583_1339 flagellar basal body P-ring protein; flagellar P-ring protein complement(2860528..2861625) Escherichia coli KO11FL 11777520 YP_005278414.1 CDS EKO11_2754 NC_016902.1 2861637 2862335 R PFAM: flagellar L-ring protein; KEGG: ssn:SSON_1099 flagellar basal body L-ring protein; flagellar L-ring protein complement(2861637..2862335) Escherichia coli KO11FL 11779590 YP_005278415.1 CDS EKO11_2755 NC_016902.1 2862388 2863170 R KEGG: sfv:SFV_1100 flagellar basal body rod protein FlgG; TIGRFAM: flagellar basal-body rod protein FlgG; fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; flagellar basal-body rod protein FlgG complement(2862388..2863170) Escherichia coli KO11FL 11777521 YP_005278416.1 CDS EKO11_2756 NC_016902.1 2863342 2864097 R KEGG: sfv:SFV_1099 flagellar basal body rod protein FlgF; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body protein; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal-body rod protein FlgF complement(2863342..2864097) Escherichia coli KO11FL 11777522 YP_005278417.1 CDS EKO11_2757 NC_016902.1 2864117 2865325 R KEGG: ebw:BWG_0924 flagellar hook protein FlgE; TIGRFAM: fagellar hook-basal body protein; PFAM: flagellar basal body FlaE domain protein; flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; fagellar hook-basal body protein complement(2864117..2865325) Escherichia coli KO11FL 11777523 YP_005278418.1 CDS EKO11_2758 NC_016902.1 2865350 2866045 R PFAM: flagellar hook capping protein; KEGG: eok:G2583_1334 flagellar hook protein FlgE; flagellar hook capping protein complement(2865350..2866045) Escherichia coli KO11FL 11777524 YP_005278419.1 CDS EKO11_2759 NC_016902.1 2866057 2866461 R KEGG: sbc:SbBS512_E2251 flagellar basal body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; flagellar basal-body rod protein FlgC complement(2866057..2866461) Escherichia coli KO11FL 11777525 YP_005278420.1 CDS EKO11_2760 NC_016902.1 2866465 2866881 R KEGG: sbc:SbBS512_E2252 flagellar basal body rod protein FlgB; TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein; flagellar basal-body rod protein FlgB complement(2866465..2866881) Escherichia coli KO11FL 11777526 YP_005278421.1 CDS EKO11_2761 NC_016902.1 2867037 2867696 D KEGG: eok:G2583_1331 flagellar biosynthesis; TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein; flagella basal body P-ring formation protein FlgA 2867037..2867696 Escherichia coli KO11FL 11779591 YP_005278422.1 CDS EKO11_2762 NC_016902.1 2867772 2868065 D KEGG: sdy:SDY_2081 anti-sigma28 factor FlgM; TIGRFAM: Anti-sigma-28 factor FlgM family protein; PFAM: Anti-sigma-28 factor FlgM family protein; anti-sigma-28 factor FlgM 2867772..2868065 Escherichia coli KO11FL 11777527 YP_005278423.1 CDS EKO11_2763 NC_016902.1 2868070 2868486 D PFAM: FlgN family protein; KEGG: sbc:SbBS512_E2256 flagella synthesis protein FlgN; FlgN family protein 2868070..2868486 Escherichia coli KO11FL 11779592 YP_005278424.1 CDS EKO11_2764 NC_016902.1 2868526 2870061 R KEGG: sbc:SbBS512_E2257 integral membrane protein MviN; TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; integral membrane protein MviN complement(2868526..2870061) Escherichia coli KO11FL 11777528 YP_005278425.1 CDS EKO11_2765 NC_016902.1 2870171 2871094 R PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ebd:ECBD_2532 virulence factor MviM-like protein; oxidoreductase domain-containing protein complement(2870171..2871094) Escherichia coli KO11FL 11777529 YP_005278426.1 CDS EKO11_2766 NC_016902.1 2871096 2871743 R PFAM: protein of unknown function DUF480; KEGG: ssn:SSON_1087 hypothetical protein; hypothetical protein complement(2871096..2871743) Escherichia coli KO11FL 11779593 YP_005278427.1 CDS EKO11_2767 NC_016902.1 2871754 2872338 R KEGG: sbc:SbBS512_E2260 ribosomal-protein-S5-alanine N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; Ribosomal-protein-alanine N-acetyltransferase complement(2871754..2872338) Escherichia coli KO11FL 11777530 YP_005278428.1 CDS EKO11_2768 NC_016902.1 2872574 2873782 D PFAM: major facilitator superfamily MFS_1; KEGG: sbc:SbBS512_E2261 multidrug resistance protein MdtH; major facilitator superfamily protein 2872574..2873782 Escherichia coli KO11FL 11777531 YP_005278429.1 CDS EKO11_2769 NC_016902.1 2873846 2874493 D KEGG: sbc:SbBS512_E2262 glutaredoxin 2; TIGRFAM: glutaredoxin, GrxB family; PFAM: glutaredoxin 2 domain protein; Glutathione S-transferase domain; GrxB family glutaredoxin 2873846..2874493 Escherichia coli KO11FL 11777532 YP_005278430.1 CDS EKO11_2770 NC_016902.1 2874627 2875187 D KEGG: sbc:SbBS512_E2264 hypothetical protein; hypothetical protein 2874627..2875187 Escherichia coli KO11FL 11777533 YP_005278431.1 CDS EKO11_2771 NC_016902.1 2875293 2876339 D TIGRFAM: dihydroorotase, homodimeric type; KEGG: eoh:ECO103_1107 dihydroorotase; PFAM: amidohydrolase; dihydroorotase, homodimeric type 2875293..2876339 Escherichia coli KO11FL 11777534 YP_005278432.1 CDS EKO11_2772 NC_016902.1 2876413 2876658 D PFAM: DinI family protein; KEGG: ssn:SSON_1081 DNA damage-inducible protein I; DinI family protein 2876413..2876658 Escherichia coli KO11FL 11777535 YP_005278433.1 CDS EKO11_2773 NC_016902.1 2876948 2877202 D KEGG: sbc:SbBS512_E2267 biofilm formation regulatory protein BssS; biofilm formation regulatory protein BssS 2876948..2877202 Escherichia coli KO11FL 11779594 YP_005278434.1 CDS EKO11_2774 NC_016902.1 2877317 2878435 D KEGG: sbc:SbBS512_E2268 N-methyltryptophan oxidase; PFAM: FAD dependent oxidoreductase; sarcosine oxidase 2877317..2878435 Escherichia coli KO11FL 11777536 YP_005278435.1 CDS EKO11_2775 NC_016902.1 2878483 2878596 D KEGG: sdy:SDY_2097 hypothetical protein; hypothetical protein 2878483..2878596 Escherichia coli KO11FL 11777537 YP_005278436.1 CDS EKO11_2776 NC_016902.1 2878782 2879423 D manually curated; KEGG: sfv:SFV_1080 putative cytochrome; putative cytochrome 2878782..2879423 Escherichia coli KO11FL 11777538 YP_005278437.1 CDS EKO11_2777 NC_016902.1 2879427 2880002 D PFAM: YceI family protein; KEGG: sbc:SbBS512_E2272 hypothetical protein; hypothetical protein 2879427..2880002 Escherichia coli KO11FL 11777539 YP_005278438.1 CDS EKO11_2778 NC_016902.1 2880044 2881096 R KEGG: sfv:SFV_1078 hypothetical protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; Rhodanese domain-containing protein complement(2880044..2881096) Escherichia coli KO11FL 11779595 YP_005278439.1 CDS EKO11_2779 NC_016902.1 2881321 2882241 D KEGG: sbc:SbBS512_E2276 lipid A biosynthesis lauroyl acyltransferase; TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; PFAM: lipid A biosynthesis acyltransferase; lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 2881321..2882241 Escherichia coli KO11FL 11777540 YP_005278440.1 CDS EKO11_2780 NC_016902.1 2882413 2883639 D PFAM: major facilitator superfamily MFS_1; KEGG: ebd:ECBD_2547 drug efflux system protein MdtG; major facilitator superfamily protein 2882413..2883639 Escherichia coli KO11FL 11777541 YP_005278441.1 CDS EKO11_2781 NC_016902.1 2883722 2884096 D KEGG: sdy:SDY_2299 hypothetical protein; hypothetical protein 2883722..2884096 Escherichia coli KO11FL 11777542 YP_005278442.1 CDS EKO11_2782 NC_016902.1 2884097 2884324 R PFAM: protein of unknown function DUF1375; KEGG: ssn:SSON_1064 hypothetical protein; hypothetical protein complement(2884097..2884324) Escherichia coli KO11FL 11777543 YP_005278443.1 CDS EKO11_2784 NC_016902.1 2884497 2887040 R KEGG: ssn:SSON_1062 glucosyltransferase MdoH; manually curated; PFAM: glycosyl transferase family 2; family 2 glycosyl transferase complement(2884497..2887040) Escherichia coli KO11FL 11777545 YP_005278444.1 CDS EKO11_2785 NC_016902.1 2887033 2888568 R PFAM: periplasmic glucan biosynthesis protein MdoG; KEGG: sbc:SbBS512_E2282 glucan biosynthesis protein G; periplasmic glucan biosynthesis protein MdoG complement(2887033..2888568) Escherichia coli KO11FL 11779596 YP_005278445.1 CDS EKO11_2786 NC_016902.1 2888962 2890119 D PFAM: acyltransferase 3; KEGG: ssn:SSON_1060 glucans biosynthesis protein; acyltransferase 3 2888962..2890119 Escherichia coli KO11FL 11777546 YP_005278446.1 CDS EKO11_2787 NC_016902.1 2890127 2891608 R KEGG: ebd:ECBD_2553 phospholipase D/transphosphatidylase; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; phospholipase D/Transphosphatidylase complement(2890127..2891608) Escherichia coli KO11FL 11777547 YP_005278447.1 CDS EKO11_2788 NC_016902.1 2891550 2892083 R KEGG: eoh:ECO103_1091 hypothetical protein; PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein; Appr-1-p processing protein complement(2891550..2892083) Escherichia coli KO11FL 11777548 YP_005278448.1 CDS EKO11_2789 NC_016902.1 2892178 2892489 R KEGG: eoh:ECO103_1090 hypothetical protein; hypothetical protein complement(2892178..2892489) Escherichia coli KO11FL 11777549 YP_005278449.1 CDS EKO11_2790 NC_016902.1 2892610 2892942 R PFAM: Curli production protein CsgC; KEGG: eoh:ECO103_1089 putative autoagglutination protein; Curli production protein CsgC complement(2892610..2892942) Escherichia coli KO11FL 11777550 YP_005278450.1 CDS EKO11_2791 NC_016902.1 2893001 2893456 R PFAM: Curlin associated repeat-containing protein; KEGG: sbo:SBO_2026 cryptic curlin major subunit; curlin associated repeat-containing protein complement(2893001..2893456) Escherichia coli KO11FL 11777551 YP_005278451.1 CDS EKO11_2792 NC_016902.1 2893497 2893952 R PFAM: Curlin associated repeat-containing protein; KEGG: ebd:ECBD_2558 curlin minor subunit; curlin associated repeat-containing protein complement(2893497..2893952) Escherichia coli KO11FL 11777552 YP_005278452.1 CDS EKO11_2793 NC_016902.1 2894706 2895356 D KEGG: sfv:SFV_1051 DNA-binding transcriptional regulator CsgD; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; LuxR family transcriptional regulator 2894706..2895356 Escherichia coli KO11FL 11777553 YP_005278453.1 CDS EKO11_2794 NC_016902.1 2895361 2895750 D PFAM: Curli assembly protein CsgE; KEGG: ssn:SSON_1048 curli assembly protein CsgE; curli assembly protein CsgE 2895361..2895750 Escherichia coli KO11FL 11777554 YP_005278454.1 CDS EKO11_2795 NC_016902.1 2895775 2896191 D PFAM: Curli production assembly/transport component CsgF; KEGG: ssn:SSON_1047 curli assembly protein CsgF; curli production assembly/transport component CsgF 2895775..2896191 Escherichia coli KO11FL 11777555 YP_005278455.1 CDS EKO11_2796 NC_016902.1 2896218 2897051 D PFAM: Curli production assembly/transport component CsgG; KEGG: ebd:ECBD_2562 curli production assembly/transport component CsgG; curli production assembly/transport component CsgG 2896218..2897051 Escherichia coli KO11FL 11777556 YP_005278456.1 CDS EKO11_2797 NC_016902.1 2897115 2897636 R PFAM: protein of unknown function DUF1097; KEGG: sbo:SBO_2032 hypothetical protein; hypothetical protein complement(2897115..2897636) Escherichia coli KO11FL 11777557 YP_005278457.1 CDS EKO11_2798 NC_016902.1 2897708 2898262 R KEGG: sbc:SbBS512_E2294 chaperone, TorD family; chaperone, TorD family complement(2897708..2898262) Escherichia coli KO11FL 11777558 YP_005278458.1 CDS EKO11_2799 NC_016902.1 2898286 2899023 R KEGG: sbc:SbBS512_E2295 putative hydrolase; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; PHP domain-containing protein complement(2898286..2899023) Escherichia coli KO11FL 11777559 YP_005278459.1 CDS EKO11_2800 NC_016902.1 2899078 2900016 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: ssn:SSON_1042 putative dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein complement(2899078..2900016) Escherichia coli KO11FL 11777560 YP_005278460.1 CDS EKO11_2801 NC_016902.1 2901254 2902240 R KEGG: eoh:ECO103_1077 putative inner membrane protein; putative inner membrane protein complement(2901254..2902240) Escherichia coli KO11FL 11777562 YP_005278461.1 CDS EKO11_2802 NC_016902.1 2902237 2902728 R KEGG: eok:G2583_1288 malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase complement(2902237..2902728) Escherichia coli KO11FL 11777563 YP_005278462.1 CDS EKO11_2803 NC_016902.1 2902831 2903130 D PFAM: transposase IS3/IS911 family protein; KEGG: cro:ROD_49861 IS3 transposase A; transposase IS3/IS911 family protein 2902831..2903130 Escherichia coli KO11FL 11777564 YP_005278463.1 CDS EKO11_2804 NC_016902.1 2903127 2903993 D PFAM: Integrase catalytic region; KEGG: cro:ROD_49871 IS3 transposase B; integrase catalytic subunit 2903127..2903993 Escherichia coli KO11FL 11777565 YP_005278464.1 CDS EKO11_2805 NC_016902.1 2904034 2905392 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: eoh:ECO103_1072 putative diguanylate cyclase; SMART: GGDEF domain containing protein; diguanylate cyclase complement(2904034..2905392) Escherichia coli KO11FL 11777566 YP_005278465.1 CDS EKO11_2806 NC_016902.1 2905979 2908402 D SMART: Tetratricopeptide repeat; KEGG: ebd:ECBD_2570 outer membrane protein PgaA; hypothetical protein 2905979..2908402 Escherichia coli KO11FL 11777567 YP_005278466.1 CDS EKO11_2807 NC_016902.1 2908411 2910429 D PFAM: polysaccharide deacetylase; KEGG: ebd:ECBD_2571 outer membrane N-deacetylase; polysaccharide deacetylase 2908411..2910429 Escherichia coli KO11FL 11779597 YP_005278467.1 CDS EKO11_2808 NC_016902.1 2910422 2911747 D PFAM: glycosyl transferase family 2; KEGG: ebd:ECBD_2572 N-glycosyltransferase; family 2 glycosyl transferase 2910422..2911747 Escherichia coli KO11FL 11779598 YP_005278468.1 CDS EKO11_2809 NC_016902.1 2911749 2912162 D KEGG: sfv:SFV_1032 putative PGA biosynthesis protein; putative PGA biosynthesis protein 2911749..2912162 Escherichia coli KO11FL 11777568 YP_005278469.1 CDS EKO11_2810 NC_016902.1 2912212 2913276 R PFAM: PhoH family protein; KEGG: ebd:ECBD_2574 hypothetical protein; PhoH family protein complement(2912212..2913276) Escherichia coli KO11FL 11777569 YP_005278470.1 CDS EKO11_2811 NC_016902.1 2913539 2914810 R KEGG: eoj:ECO26_1256 hypothetical protein; TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase; dyp-type peroxidase family protein complement(2913539..2914810) Escherichia coli KO11FL 11777570 YP_005278471.1 CDS EKO11_2812 NC_016902.1 2914816 2915943 R PFAM: Peptidase M75, Imelysin; KEGG: eoh:ECO103_1063 hypothetical protein; peptidase M75, Imelysin complement(2914816..2915943) Escherichia coli KO11FL 11777571 YP_005278472.1 CDS EKO11_2813 NC_016902.1 2916001 2916831 R KEGG: ssn:SSON_1036 high-affinity iron permease; TIGRFAM: FTR1 family protein; PFAM: iron permease FTR1; FTR1 family protein complement(2916001..2916831) Escherichia coli KO11FL 11777572 YP_005278473.1 CDS EKO11_2815 NC_016902.1 2917497 2919005 R KEGG: sbo:SBO_2042 major sodium/proline symporter; TIGRFAM: sodium/proline symporter; SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; sodium/proline symporter complement(2917497..2919005) Escherichia coli KO11FL 11777574 YP_005278474.1 CDS EKO11_2816 NC_016902.1 2919428 2923390 D KEGG: eoi:ECO111_1203 trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Proline dehydrogenase; Aldehyde Dehydrogenase; delta-1-pyrroline-5-carboxylate dehydrogenase 2919428..2923390 Escherichia coli KO11FL 11777575 YP_005278475.1 CDS EKO11_2817 NC_016902.1 2923430 2924068 R KEGG: sbc:SbBS512_E2305 transcriptional regulator RutR; TIGRFAM: pyrimidine utilization regulatory protein R; PFAM: Tetracycline transcriptional regulator YcdC domain-containing protein; regulatory protein TetR; TetR family transcriptional regulator complement(2923430..2924068) Escherichia coli KO11FL 11777576 YP_005278476.1 CDS EKO11_2818 NC_016902.1 2924356 2925447 D KEGG: eoh:ECO103_1058 putative monooxygenase; TIGRFAM: pyrimidine utilization protein A; PFAM: Luciferase-like, subgroup; pyrimidine utilization protein A 2924356..2925447 Escherichia coli KO11FL 11777577 YP_005278477.1 CDS EKO11_2819 NC_016902.1 2925444 2926139 D KEGG: ssn:SSON_1030 putative synthetase; TIGRFAM: pyrimidine utilization protein B; PFAM: isochorismatase hydrolase; pyrimidine utilization protein B 2925444..2926139 Escherichia coli KO11FL 11777578 YP_005278478.1 CDS EKO11_2820 NC_016902.1 2926151 2926537 D KEGG: eoi:ECO111_1199 hypothetical protein; TIGRFAM: pyrimidine utilization protein C; PFAM: Endoribonuclease L-PSP; pyrimidine utilization protein C 2926151..2926537 Escherichia coli KO11FL 11777579 YP_005278479.1 CDS EKO11_2821 NC_016902.1 2926545 2927345 D KEGG: eoi:ECO111_1198 putative hydrolase; TIGRFAM: pyrimidine utilization protein D; PFAM: alpha/beta hydrolase fold; pyrimidine utilization protein D 2926545..2927345 Escherichia coli KO11FL 11777580 YP_005278480.1 CDS EKO11_2822 NC_016902.1 2927355 2927945 D PFAM: nitroreductase; KEGG: eoi:ECO111_1197 hypothetical protein; nitroreductase 2927355..2927945 Escherichia coli KO11FL 11777581 YP_005278481.1 CDS EKO11_2823 NC_016902.1 2927956 2928450 D KEGG: ebd:ECBD_2587 flavin reductase domain protein FMN-binding; TIGRFAM: pyrimidine utilization flavin reductase protein F; PFAM: flavin reductase domain protein FMN-binding; pyrimidine utilization flavin reductase protein F 2927956..2928450 Escherichia coli KO11FL 11777582 YP_005278482.1 CDS EKO11_2824 NC_016902.1 2928471 2929799 D KEGG: eoi:ECO111_1195 putative transporter; TIGRFAM: pyrimidine utilization transport protein G; uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; pyrimidine utilization transport protein G 2928471..2929799 Escherichia coli KO11FL 11777583 YP_005278483.1 CDS EKO11_2825 NC_016902.1 2929882 2930085 R KEGG: ebd:ECBD_2589 uncharacterized protein YmdF; manually curated; PFAM: Stress-induced protein, KGG, repeat; Stress-induced protein, KGG, repeat complement(2929882..2930085) Escherichia coli KO11FL 11779599 YP_005278484.1 CDS EKO11_2826 NC_016902.1 2930428 2931024 D KEGG: sfv:SFV_1016 TrpR binding protein WrbA; TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase; flavoprotein WrbA 2930428..2931024 Escherichia coli KO11FL 11777584 YP_005278485.1 CDS EKO11_2827 NC_016902.1 2931045 2931272 D KEGG: sdy:SDY_0979 hypothetical protein; hypothetical protein 2931045..2931272 Escherichia coli KO11FL 11779600 YP_005278486.1 CDS EKO11_2828 NC_016902.1 2931310 2932551 R KEGG: eoh:ECO103_1048 glucose-1-phosphatase/inositol phosphatase; PFAM: histidine acid phosphatase; Glucose-1-phosphatase complement(2931310..2932551) Escherichia coli KO11FL 11779601 YP_005278487.1 CDS EKO11_2830 NC_016902.1 2934361 2935281 D KEGG: sbo:SBO_2231 curved DNA-binding protein CbpA; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; chaperone DnaJ domain-containing protein 2934361..2935281 Escherichia coli KO11FL 11777586 YP_005278488.1 CDS EKO11_2831 NC_016902.1 2935281 2935586 D KEGG: sbc:SbBS512_E2315 chaperone-modulator protein CbpM; chaperone-modulator protein CbpM 2935281..2935586 Escherichia coli KO11FL 11777587 YP_005278489.1 CDS EKO11_2832 NC_016902.1 2935679 2936278 R KEGG: eoi:ECO111_1109 chaperone protein TorD; chaperone protein TorD complement(2935679..2936278) Escherichia coli KO11FL 11777588 YP_005278490.1 CDS EKO11_2833 NC_016902.1 2936275 2938821 R TIGRFAM: trimethylamine-N-oxide reductase TorA; molybdopterin guanine dinucleotide-containing S/N-oxide reductase; KEGG: eoi:ECO111_1108 trimethylamine N-oxide reductase I, catalytic subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; trimethylamine-N-oxide reductase TorA complement(2936275..2938821) Escherichia coli KO11FL 11777589 YP_005278491.1 CDS EKO11_2834 NC_016902.1 2938821 2939993 R KEGG: efe:EFER_1191 trimethylamine N-oxide (TMAO) reductase I, cytochrome c-type subunit; TIGRFAM: trimethylamine-N-oxide reductase c-type cytochrome TorC; PFAM: NapC/NirT cytochrome c domain protein; trimethylamine-N-oxide reductase c-type cytochrome TorC complement(2938821..2939993) Escherichia coli KO11FL 11777590 YP_005278492.1 CDS EKO11_2835 NC_016902.1 2940123 2940815 D KEGG: sbc:SbBS512_E2320 DNA-binding transcriptional regulator TorR; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; two component transcriptional regulator, winged helix family 2940123..2940815 Escherichia coli KO11FL 11777591 YP_005278493.1 CDS EKO11_2836 NC_016902.1 2940788 2941816 R KEGG: ssn:SSON_1002 TMAO reductase system periplasmic protein TorT; TIGRFAM: TMAO reductase system periplasmic protein TorT; PFAM: periplasmic binding protein/LacI transcriptional regulator; TMAO reductase system periplasmic protein TorT complement(2940788..2941816) Escherichia coli KO11FL 11777592 YP_005278494.1 CDS EKO11_2837 NC_016902.1 2941899 2944643 D TIGRFAM: TMAO reductase sytem sensor TorS; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; response regulator receiver; Hpt domain protein; KEGG: ebw:BWG_0847 hybrid sensory histidine kinase TorS; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; response regulator receiver; Hpt domain protein; multi-sensor hybrid histidine kinase 2941899..2944643 Escherichia coli KO11FL 11777593 YP_005278495.1 CDS EKO11_2838 NC_016902.1 2944715 2945788 D KEGG: ebd:ECBD_2602 4Fe-4S ferredoxin iron-sulfur binding domain protein; 4Fe-4S ferredoxin 2944715..2945788 Escherichia coli KO11FL 11777594 YP_005278496.1 CDS EKO11_2839 NC_016902.1 2945836 2946009 R PFAM: GnsAGnsB family protein; KEGG: sbc:SbBS512_E2323 transcriptional regulator, GnsA/GnsB family; GnsAGnsB family protein complement(2945836..2946009) Escherichia coli KO11FL 11777595 YP_005278497.1 CDS EKO11_2840 NC_016902.1 2945999 2946229 R manually curated; KEGG: eoi:ECO111_1101 cold shock gene; cold shock protein complement(2945999..2946229) Escherichia coli KO11FL 11777596 YP_005278498.1 CDS EKO11_2841 NC_016902.1 2946403 2946615 R KEGG: sbc:SbBS512_E2326 cold shock protein CspG; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock protein complement(2946403..2946615) Escherichia coli KO11FL 11777597 YP_005278499.1 CDS EKO11_2842 NC_016902.1 2946901 2947113 D manually curated; PFAM: Cold-shock protein DNA-binding; KEGG: sdy:SDY_0964 cold shock-like protein; SMART: Cold shock protein; cold-shock protein 2946901..2947113 Escherichia coli KO11FL 11777598 YP_005278500.1 CDS EKO11_2843 NC_016902.1 2947556 2947861 D KEGG: sbc:SbBS512_E2328 putative inner membrane protein; putative inner membrane protein 2947556..2947861 Escherichia coli KO11FL 11779602 YP_005278501.1 CDS EKO11_2844 NC_016902.1 2947968 2948612 D KEGG: sbc:SbBS512_E2329 group 4 capsule (G4C) polysaccharide, lipoprotein YmcC; group 4 capsule (G4C) polysaccharide, lipoprotein YmcC 2947968..2948612 Escherichia coli KO11FL 11779603 YP_005278502.1 CDS EKO11_2845 NC_016902.1 2948609 2949355 D PFAM: protein of unknown function DUF1017; KEGG: ssn:SSON_0992 hypothetical protein; hypothetical protein 2948609..2949355 Escherichia coli KO11FL 11777599 YP_005278503.1 CDS EKO11_2846 NC_016902.1 2949355 2951451 D PFAM: protein of unknown function DUF940 membrane lipoprotein; KEGG: eoi:ECO111_1095 hypothetical protein; hypothetical protein 2949355..2951451 Escherichia coli KO11FL 11779604 YP_005278504.1 CDS EKO11_2847 NC_016902.1 2951497 2952636 D PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: ssn:SSON_0990 putative function in exopolysaccharide production; polysaccharide export protein 2951497..2952636 Escherichia coli KO11FL 11777600 YP_005278505.1 CDS EKO11_2848 NC_016902.1 2952624 2953070 D KEGG: sdy:SDY_0958 phosphotyrosine-protein phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; protein tyrosine phosphatase 2952624..2953070 Escherichia coli KO11FL 11777601 YP_005278506.1 CDS EKO11_2849 NC_016902.1 2953090 2955270 D TIGRFAM: capsular exopolysaccharide family; KEGG: sbo:SBO_2249 cryptic autophosphorylating protein tyrosine kinase Etk; PFAM: lipopolysaccharide biosynthesis protein; capsular exopolysaccharide family protein 2953090..2955270 Escherichia coli KO11FL 11777602 YP_005278507.1 CDS EKO11_2850 NC_016902.1 2955385 2956683 R KEGG: ssn:SSON_0987 phosphoanhydride phosphorylase; PFAM: histidine acid phosphatase; 4-phytase complement(2955385..2956683) Escherichia coli KO11FL 11777603 YP_005278508.1 CDS EKO11_2851 NC_016902.1 2956763 2956855 R PFAM: membrane bound YbgT family protein; KEGG: sbo:SBO_2251 hypothetical protein; membrane bound YbgT family protein complement(2956763..2956855) Escherichia coli KO11FL 11777604 YP_005278509.1 CDS EKO11_2852 NC_016902.1 2956868 2958004 R KEGG: ssn:SSON_0985 third cytochrome oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; cytochrome d ubiquinol oxidase, subunit II complement(2956868..2958004) Escherichia coli KO11FL 11777605 YP_005278510.1 CDS EKO11_2853 NC_016902.1 2958016 2959560 R PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: sfv:SFV_0987 third cytochrome oxidase, subunit I; cytochrome bd ubiquinol oxidase subunit I complement(2958016..2959560) Escherichia coli KO11FL 11777606 YP_005278511.1 CDS EKO11_2854 NC_016902.1 2959694 2960551 R PFAM: HupH hydrogenase expression protein; KEGG: ebd:ECBD_2618 HupH hydrogenase expression protein; HupH hydrogenase expression protein complement(2959694..2960551) Escherichia coli KO11FL 11777607 YP_005278512.1 CDS EKO11_2855 NC_016902.1 2960548 2960946 R PFAM: hydrogenase-1 expression HyaE; KEGG: ebd:ECBD_2619 hydrogenase-1 operon protein HyaE; hydrogenase-1 expression HyaE complement(2960548..2960946) Escherichia coli KO11FL 11777608 YP_005278513.1 CDS EKO11_2856 NC_016902.1 2960943 2961530 R KEGG: sdy:SDY_0950 hydrogenase 1 maturation protease; TIGRFAM: hydrogenase expression/formation protein; hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; hydrogenase expression/formation protein complement(2960943..2961530) Escherichia coli KO11FL 11777609 YP_005278514.1 CDS EKO11_2857 NC_016902.1 2961527 2962234 R TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; KEGG: sdy:SDY_0949 hydrogenase 1 b-type cytochrome subunit; Ni/Fe-hydrogenase, b-type cytochrome subunit complement(2961527..2962234) Escherichia coli KO11FL 11777610 YP_005278515.1 CDS EKO11_2858 NC_016902.1 2962253 2964046 R PFAM: nickel-dependent hydrogenase large subunit; KEGG: sbo:SBO_2258 hydrogenase 1 large subunit; nickel-dependent hydrogenase large subunit complement(2962253..2964046) Escherichia coli KO11FL 11777611 YP_005278516.1 CDS EKO11_2859 NC_016902.1 2964043 2965161 R TIGRFAM: hydrogenase (NiFe) small subunit HydA; KEGG: eoh:ECO103_1017 hydrogenase 1, small subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; hydrogenase (NiFe) small subunit HydA complement(2964043..2965161) Escherichia coli KO11FL 11777612 YP_005278517.1 CDS EKO11_2860 NC_016902.1 2965882 2966541 D PFAM: protein of unknown function UPF0005; KEGG: sdy:SDY_0945 hypothetical protein; hypothetical protein 2965882..2966541 Escherichia coli KO11FL 11777614 YP_005278518.1 CDS EKO11_2861 NC_016902.1 2966632 2966961 D KEGG: sbc:SbBS512_E2347 sulfur transfer protein TusE; TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family; PFAM: DsrC family protein; TusE/DsrC/DsvC family sulfur relay protein 2966632..2966961 Escherichia coli KO11FL 11777615 YP_005278519.1 CDS EKO11_2862 NC_016902.1 2966958 2967236 R PFAM: acylphosphatase; KEGG: sdy:SDY_0943 hypothetical protein; acylphosphatase complement(2966958..2967236) Escherichia coli KO11FL 11777616 YP_005278520.1 CDS EKO11_2863 NC_016902.1 2967331 2968521 D manually curated; PFAM: Conserved hypothetical protein CHP00095; KEGG: ebw:BWG_0819 putative methyltransferase; SMART: PUA domain containing protein; hypothetical protein 2967331..2968521 Escherichia coli KO11FL 11777617 YP_005278521.1 CDS EKO11_2864 NC_016902.1 2968579 2968896 D KEGG: sbc:SbBS512_E2349 heat shock protein HspQ; TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region; hemimethylated DNA binding protein 2968579..2968896 Escherichia coli KO11FL 11777618 YP_005278522.1 CDS EKO11_2865 NC_016902.1 2968941 2969354 R PFAM: CoA-binding domain protein; KEGG: sbc:SbBS512_E2350 putative CoA-binding protein; CoA-binding protein complement(2968941..2969354) Escherichia coli KO11FL 11777619 YP_005278523.1 CDS EKO11_2866 NC_016902.1 2969527 2970189 D PFAM: Protein of unknown function DUF2057; KEGG: sdy:SDY_0939 hypothetical protein; hypothetical protein 2969527..2970189 Escherichia coli KO11FL 11779605 YP_005278524.1 CDS EKO11_2867 NC_016902.1 2970285 2970743 D TIGRFAM: methylglyoxal synthase; KEGG: sdy:SDY_0938 methylglyoxal synthase; PFAM: MGS domain protein; methylglyoxal synthase 2970285..2970743 Escherichia coli KO11FL 11779606 YP_005278525.1 CDS EKO11_2868 NC_016902.1 2970775 2972829 R PFAM: UvrD/REP helicase; KEGG: ebd:ECBD_2632 DNA helicase IV; UvrD/REP helicase complement(2970775..2972829) Escherichia coli KO11FL 11777620 YP_005278526.1 CDS EKO11_2869 NC_016902.1 2972952 2973398 D PFAM: protein of unknown function DUF307; KEGG: sbc:SbBS512_E2354 hypothetical protein; hypothetical protein 2972952..2973398 Escherichia coli KO11FL 11777621 YP_005278527.1 CDS EKO11_2870 NC_016902.1 2973408 2975570 D TIGRFAM: hypothetical protein; integral membrane protein, YccS/YhfK family; KEGG: ssn:SSON_0964 hypothetical protein; hypothetical protein 2973408..2975570 Escherichia coli KO11FL 11777622 YP_005278528.1 CDS EKO11_2871 NC_016902.1 2975533 2976162 R PFAM: TfoX domain-containing protein; KEGG: sdy:SDY_0934 hypothetical protein; competence-specific genes regulator complement(2975533..2976162) Escherichia coli KO11FL 11777623 YP_005278529.1 CDS EKO11_2872 NC_016902.1 2976381 2976890 D KEGG: sbc:SbBS512_E2358 SOS cell division inhibitor; TIGRFAM: cell division inhibitor SulA; PFAM: cell division inhibitor SulA; cell division inhibitor SulA 2976381..2976890 Escherichia coli KO11FL 11777624 YP_005278530.1 CDS EKO11_2873 NC_016902.1 2977247 2978287 D KEGG: sbc:SbBS512_E2359 outer membrane protein A; manually curated; PFAM: OmpA/MotB domain protein; OmpA/MotB domain-containing protein 2977247..2978287 Escherichia coli KO11FL 11777625 YP_005278531.1 CDS EKO11_2874 NC_016902.1 2978363 2978815 R PFAM: protein of unknown function DUF1047; KEGG: sdy:SDY_0929 hypothetical protein; hypothetical protein complement(2978363..2978815) Escherichia coli KO11FL 11777626 YP_005278532.1 CDS EKO11_2875 NC_016902.1 2979001 2980761 D KEGG: ssn:SSON_0959 putative ATP-dependent protease; putative ATP-dependent protease 2979001..2980761 Escherichia coli KO11FL 11777627 YP_005278533.1 CDS EKO11_2876 NC_016902.1 2980830 2981348 D TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA; KEGG: sdy:SDY_0927 3-hydroxydecanoyl-(acyl carrier protein) dehydratase; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 2980830..2981348 Escherichia coli KO11FL 11777628 YP_005278534.1 CDS EKO11_2877 NC_016902.1 2981418 2981585 R PFAM: ribosome modulation factor; KEGG: sdy:SDY_0926 ribosome modulation factor; ribosome modulation factor complement(2981418..2981585) Escherichia coli KO11FL 11777629 YP_005278535.1 CDS EKO11_2878 NC_016902.1 2981841 2982404 R PFAM: protein of unknown function DUF330; KEGG: eoi:ECO111_1020 hypothetical protein; hypothetical protein complement(2981841..2982404) Escherichia coli KO11FL 11777630 YP_005278536.1 CDS EKO11_2879 NC_016902.1 2982401 2984041 R PFAM: Mammalian cell entry related domain protein; KEGG: ebd:ECBD_2644 paraquat-inducible protein B; Mammalian cell entry related domain-containing protein complement(2982401..2984041) Escherichia coli KO11FL 11777631 YP_005278537.1 CDS EKO11_2880 NC_016902.1 2984046 2985299 R KEGG: sbo:SBO_2281 paraquat-inducible protein A; TIGRFAM: integral membrane protein, PqiA family; PFAM: Paraquat-inducible protein A; PqiA family integral membrane protein complement(2984046..2985299) Escherichia coli KO11FL 11777632 YP_005278538.1 CDS EKO11_2881 NC_016902.1 2985429 2987336 R KEGG: ssn:SSON_0953 ABC transporter ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(2985429..2987336) Escherichia coli KO11FL 11777633 YP_005278539.1 CDS EKO11_2882 NC_016902.1 2987347 2989455 R KEGG: eoh:ECO103_0994 23S rRNA m(2)G2445 methyltransferase; PFAM: RNA methylase; THUMP domain-containing protein; Conserved hypothetical protein CHP00095; rRNA (guanine-N(2)-)-methyltransferase complement(2987347..2989455) Escherichia coli KO11FL 11777634 YP_005278540.1 CDS EKO11_2883 NC_016902.1 2989699 2990808 D PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; ferredoxin; KEGG: eoh:ECO103_0993 putative 2Fe-2S cluster-containing protein; MOSC domain-containing protein 2989699..2990808 Escherichia coli KO11FL 11777635 YP_005278541.1 CDS EKO11_2884 NC_016902.1 2990805 2991347 R PFAM: protein of unknown function DUF1379; KEGG: sbc:SbBS512_E2370 hypothetical protein; hypothetical protein complement(2990805..2991347) Escherichia coli KO11FL 11777636 YP_005278542.1 CDS EKO11_2885 NC_016902.1 2991521 2992531 R TIGRFAM: dihydroorotate dehydrogenase; KEGG: sbc:SbBS512_E2372 dihydroorotate dehydrogenase 2; PFAM: dihydroorotate oxidase; dihydroorotate dehydrogenase complement(2991521..2992531) Escherichia coli KO11FL 11777637 YP_005278543.1 CDS EKO11_2886 NC_016902.1 2992641 2993330 R PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: ssn:SSON_0948 putativi pili assembly chaperone; Pili assembly chaperone, N-terminal protein complement(2992641..2993330) Escherichia coli KO11FL 11777638 YP_005278544.1 CDS EKO11_2887 NC_016902.1 2993344 2993907 R PFAM: Fimbrial protein domain-containing protein; KEGG: eok:G2583_1178 putative fimbrial-like protein; fimbrial protein domain-containing protein complement(2993344..2993907) Escherichia coli KO11FL 11777639 YP_005278545.1 CDS EKO11_2888 NC_016902.1 2993867 2994409 R PFAM: Fimbrial protein domain-containing protein; KEGG: sbc:SbBS512_E2375 fimbrial protein; fimbrial protein domain-containing protein complement(2993867..2994409) Escherichia coli KO11FL 11777640 YP_005278546.1 CDS EKO11_2889 NC_016902.1 2994421 2995491 R PFAM: Fimbrial protein domain-containing protein; KEGG: sbc:SbBS512_E2376 putative fimbrial protein; fimbrial protein domain-containing protein complement(2994421..2995491) Escherichia coli KO11FL 11777641 YP_005278547.1 CDS EKO11_2890 NC_016902.1 2995482 2998082 R PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: eoi:ECO111_1008 putative outer membrane usher protein; fimbrial biogenesis outer membrane usher protein complement(2995482..2998082) Escherichia coli KO11FL 11777642 YP_005278548.1 CDS EKO11_2891 NC_016902.1 2998107 2998808 R PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: ssn:SSON_0943 putative chaperone; Pili assembly chaperone, N-terminal protein complement(2998107..2998808) Escherichia coli KO11FL 11777643 YP_005278549.1 CDS EKO11_2892 NC_016902.1 2998891 2999433 R PFAM: Fimbrial protein domain-containing protein; KEGG: sbc:SbBS512_E2380 fimbrial protein; fimbrial protein domain-containing protein complement(2998891..2999433) Escherichia coli KO11FL 11779607 YP_005278550.1 CDS EKO11_2893 NC_016902.1 2999789 3000364 D TIGRFAM: FMN reductase; KEGG: sbc:SbBS512_E2381 NAD(P)H-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; FMN reductase 2999789..3000364 Escherichia coli KO11FL 11777644 YP_005278551.1 CDS EKO11_2894 NC_016902.1 3000357 3001316 D KEGG: ebd:ECBD_2659 alkanesulfonate transporter substrate-binding subunit; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3; aliphatic sulfonate ABC transporter substrate-binding protein 3000357..3001316 Escherichia coli KO11FL 11777645 YP_005278552.1 CDS EKO11_2895 NC_016902.1 3001313 3002458 D KEGG: eoh:ECO103_0980 alkanesulfonate monooxygenase; TIGRFAM: alkanesulfonate monooxygenase, FMNH(2)-dependent; PFAM: Luciferase-like, subgroup; alkanesulfonate monooxygenase 3001313..3002458 Escherichia coli KO11FL 11777646 YP_005278553.1 CDS EKO11_2896 NC_016902.1 3002469 3003260 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ssn:SSON_0937 alkanesulfonate transporter permease subunit; binding-protein-dependent transport system inner membrane protein 3002469..3003260 Escherichia coli KO11FL 11777647 YP_005278554.1 CDS EKO11_2897 NC_016902.1 3003257 3004024 D KEGG: ssn:SSON_0936 aliphatic sulfonates transport ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3003257..3004024 Escherichia coli KO11FL 11779608 YP_005278555.1 CDS EKO11_2898 NC_016902.1 3004231 3006843 R KEGG: eoh:ECO103_0977 aminopeptidase N; TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; aminopeptidase N complement(3004231..3006843) Escherichia coli KO11FL 11777648 YP_005278556.1 CDS EKO11_2899 NC_016902.1 3007109 3008311 D KEGG: sbo:SBO_2222 nicotinate phosphoribosyltransferase; TIGRFAM: nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; nicotinate phosphoribosyltransferase 3007109..3008311 Escherichia coli KO11FL 11777649 YP_005278557.1 CDS EKO11_2900 NC_016902.1 3008480 3009880 D TIGRFAM: asparaginyl-tRNA synthetase; KEGG: sbc:SbBS512_E2388 asparaginyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; asparaginyl-tRNA synthetase 3008480..3009880 Escherichia coli KO11FL 11777650 YP_005278558.1 CDS EKO11_2901 NC_016902.1 3010482 3011570 D PFAM: porin Gram-negative type; KEGG: sbc:SbBS512_E2389 outer membrane protein F; porin 3010482..3011570 Escherichia coli KO11FL 11779609 YP_005278559.1 CDS EKO11_2902 NC_016902.1 3011754 3012944 D KEGG: sdy:SDY_2329 aromatic amino acid aminotransferase; PFAM: aminotransferase class I and II; aspartate transaminase 3011754..3012944 Escherichia coli KO11FL 11777651 YP_005278560.1 CDS EKO11_2903 NC_016902.1 3013166 3013813 R KEGG: sbo:SBO_2218 hypothetical protein; hypothetical protein complement(3013166..3013813) Escherichia coli KO11FL 11777652 YP_005278561.1 CDS EKO11_2904 NC_016902.1 3013840 3014388 R PFAM: protein of unknown function DUF882; KEGG: sdy:SDY_2331 hypothetical protein; hypothetical protein complement(3013840..3014388) Escherichia coli KO11FL 11777653 YP_005278562.1 CDS EKO11_2905 NC_016902.1 3014569 3016416 R PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding domain 1 protein; KEGG: sbo:SBO_2216 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein complement(3014569..3016416) Escherichia coli KO11FL 11777654 YP_005278563.1 CDS EKO11_2906 NC_016902.1 3016677 3021137 R PFAM: chromosome segregation and condensation protein MukB domain protein; KEGG: ebw:BWG_0776 cell division protein MukB; chromosome segregation and condensation protein MukB domain protein complement(3016677..3021137) Escherichia coli KO11FL 11777655 YP_005278564.1 CDS EKO11_2907 NC_016902.1 3021137 3021841 R PFAM: chromosome segregation and condensation protein MukE; KEGG: sbc:SbBS512_E2401 condesin subunit E; chromosome segregation and condensation protein MukE complement(3021137..3021841) Escherichia coli KO11FL 11777656 YP_005278565.1 CDS EKO11_2908 NC_016902.1 3021822 3023144 R PFAM: chromosome segregation and condensation protein MukF; KEGG: sdy:SDY_2336 condesin subunit F; chromosome segregation and condensation protein MukF complement(3021822..3023144) Escherichia coli KO11FL 11777657 YP_005278566.1 CDS EKO11_2909 NC_016902.1 3023141 3023926 R PFAM: Methyltransferase type 11; KEGG: sdy:SDY_2337 putative metallothionein SmtA; type 11 methyltransferase complement(3023141..3023926) Escherichia coli KO11FL 11777658 YP_005278567.1 CDS EKO11_2910 NC_016902.1 3024062 3024841 D PFAM: protein of unknown function DUF218; KEGG: sfv:SFV_0921 hypothetical protein; hypothetical protein 3024062..3024841 Escherichia coli KO11FL 11777659 YP_005278568.1 CDS EKO11_2911 NC_016902.1 3024818 3025711 R KEGG: sbc:SbBS512_E2404 hypothetical protein; hypothetical protein complement(3024818..3025711) Escherichia coli KO11FL 11777660 YP_005278569.1 CDS EKO11_2912 NC_016902.1 3025865 3026611 R TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: ebd:ECBD_2677 3-deoxy-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase; 3-deoxy-D-manno-octulosonate cytidylyltransferase complement(3025865..3026611) Escherichia coli KO11FL 11779610 YP_005278570.1 CDS EKO11_2913 NC_016902.1 3026608 3026790 R PFAM: protein of unknown function DUF343; KEGG: sdy:SDY_2341 hypothetical protein; hypothetical protein complement(3026608..3026790) Escherichia coli KO11FL 11777661 YP_005278571.1 CDS EKO11_2914 NC_016902.1 3026842 3028074 R PFAM: protein of unknown function DUF1006; KEGG: eoi:ECO111_0984 hypothetical protein; hypothetical protein complement(3026842..3028074) Escherichia coli KO11FL 11777662 YP_005278572.1 CDS EKO11_2915 NC_016902.1 3028111 3029097 R TIGRFAM: tetraacyldisaccharide 4'-kinase; KEGG: ssn:SSON_0917 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase; tetraacyldisaccharide 4'-kinase complement(3028111..3029097) Escherichia coli KO11FL 11777663 YP_005278573.1 CDS EKO11_2916 NC_016902.1 3029094 3030842 R TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter transmembrane region; ABC transporter related; KEGG: sdy:SDY_2344 lipid transporter ATP-binding/permease protein; SMART: AAA ATPase; lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA complement(3029094..3030842) Escherichia coli KO11FL 11779611 YP_005278574.1 CDS EKO11_2917 NC_016902.1 3030879 3033143 R KEGG: eoj:ECO26_1039 hypothetical protein; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2 complement(3030879..3033143) Escherichia coli KO11FL 11777664 YP_005278575.1 CDS EKO11_2918 NC_016902.1 3033350 3033634 R TIGRFAM: integration host factor, beta subunit; PFAM: histone family protein DNA-binding protein; KEGG: sdy:SDY_2346 integration host factor subunit beta; SMART: histone family protein DNA-binding protein; integration host factor subunit beta complement(3033350..3033634) Escherichia coli KO11FL 11777665 YP_005278576.1 CDS EKO11_2919 NC_016902.1 3033794 3035467 R KEGG: sbc:SbBS512_E2417 30S ribosomal protein S1; TIGRFAM: ribosomal protein S1; PFAM: RNA binding S1 domain protein; 30S ribosomal protein S1 complement(3033794..3035467) Escherichia coli KO11FL 11777666 YP_005278577.1 CDS EKO11_2920 NC_016902.1 3035578 3036261 R TIGRFAM: cytidylate kinase; KEGG: sbc:SbBS512_E2418 cytidylate kinase; PFAM: cytidylate kinase region; cytidylate kinase complement(3035578..3036261) Escherichia coli KO11FL 11777667 YP_005278578.1 CDS EKO11_2921 NC_016902.1 3036434 3037198 R PFAM: peptidase M48 Ste24p; KEGG: ssn:SSON_0911 putative heat shock protein; peptidase M48 Ste24p complement(3036434..3037198) Escherichia coli KO11FL 11779612 YP_005278579.1 CDS EKO11_2922 NC_016902.1 3037367 3038650 R KEGG: sbc:SbBS512_E2420 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); 3-phosphoshikimate 1-carboxyvinyltransferase complement(3037367..3038650) Escherichia coli KO11FL 11779613 YP_005278580.1 CDS EKO11_2923 NC_016902.1 3038721 3039809 R TIGRFAM: phosphoserine aminotransferase; KEGG: ssn:SSON_0908 phosphoserine aminotransferase; PFAM: aminotransferase class V; phosphoserine aminotransferase complement(3038721..3039809) Escherichia coli KO11FL 11777668 YP_005278581.1 CDS EKO11_2924 NC_016902.1 3040008 3040700 R PFAM: protein of unknown function DUF421; KEGG: sbc:SbBS512_E2422 hypothetical protein; hypothetical protein complement(3040008..3040700) Escherichia coli KO11FL 11777669 YP_005278582.1 CDS EKO11_2925 NC_016902.1 3040830 3042590 D PFAM: protein of unknown function DUF181; KEGG: eoh:ECO103_0948 hypothetical protein; hypothetical protein 3040830..3042590 Escherichia coli KO11FL 11777670 YP_005278583.1 CDS EKO11_2927 NC_016902.1 3043383 3045089 D PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; KEGG: zmo:ZMO1360 thiamine pyrophosphate protein TPP binding domain-containing protein; thiamine pyrophosphate TPP-binding domain-containing protein 3043383..3045089 Escherichia coli KO11FL 11777671 YP_005278584.1 CDS EKO11_2928 NC_016902.1 3045149 3046300 D PFAM: iron-containing alcohol dehydrogenase; KEGG: zmn:Za10_1617 iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 3045149..3046300 Escherichia coli KO11FL 11777672 YP_005278585.1 CDS EKO11_2929 NC_016902.1 3046776 3047435 D KEGG: abn:AB57_0280 chloramphenicol acetyltransferase; PFAM: chloramphenicol acetyltransferase; chloramphenicol O-acetyltransferase 3046776..3047435 Escherichia coli KO11FL 11777673 YP_005278586.1 CDS EKO11_2933 NC_016902.1 3051490 3052563 D manually curated; TIGRFAM: formate/nitrite transporter; KEGG: sfv:SFV_0904 formate transporter; PFAM: formate/nitrite transporter; formate/nitrite transporter 3051490..3052563 Escherichia coli KO11FL 11777677 YP_005278587.1 CDS EKO11_2934 NC_016902.1 3052618 3054900 D TIGRFAM: formate acetyltransferase; KEGG: sdy:SDY_2358 formate acetyltransferase 1; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical; formate acetyltransferase 3052618..3054900 Escherichia coli KO11FL 11777678 YP_005278588.1 CDS EKO11_2935 NC_016902.1 3055092 3055832 D TIGRFAM: pyruvate formate-lyase activating enzyme; KEGG: sdy:SDY_2359 pyruvate formate lyase-activating enzyme 1; PFAM: Radical SAM domain protein; pyruvate formate-lyase activating enzyme 3055092..3055832 Escherichia coli KO11FL 11777679 YP_005278589.1 CDS EKO11_2936 NC_016902.1 3055914 3056504 R PFAM: NAD(P)H dehydrogenase (quinone); KEGG: eoh:ECO103_0944 hypothetical protein; NAD(P)H dehydrogenase (quinone) complement(3055914..3056504) Escherichia coli KO11FL 11777680 YP_005278590.1 CDS EKO11_2937 NC_016902.1 3056604 3057512 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eoi:ECO111_0968 putative transcriptional regulator LysR-type; LysR family transcriptional regulator 3056604..3057512 Escherichia coli KO11FL 11777681 YP_005278591.1 CDS EKO11_2938 NC_016902.1 3057513 3058943 R PFAM: amino acid permease-associated region; KEGG: ebd:ECBD_2696 amino acid permease-associated region; amino acid permease complement(3057513..3058943) Escherichia coli KO11FL 11777682 YP_005278592.1 CDS EKO11_2939 NC_016902.1 3059153 3060277 R PFAM: major facilitator superfamily MFS_1; KEGG: sdy:SDY_2363 putative MFS family transporter protein; major facilitator superfamily protein complement(3059153..3060277) Escherichia coli KO11FL 11777683 YP_005278593.1 CDS EKO11_2940 NC_016902.1 3060616 3061242 D PFAM: isochorismatase hydrolase; KEGG: ssn:SSON_0898 hypothetical protein; isochorismatase hydrolase 3060616..3061242 Escherichia coli KO11FL 11777684 YP_005278594.1 CDS EKO11_2941 NC_016902.1 3061278 3062141 R PFAM: DMSO reductase anchor subunit (DmsC); KEGG: eoi:ECO111_0964 dimethyl sulfoxide reductase, anaerobic, subunit C; DMSO reductase anchor subunit DmsC complement(3061278..3062141) Escherichia coli KO11FL 11779614 YP_005278595.1 CDS EKO11_2942 NC_016902.1 3062143 3062760 R TIGRFAM: dimethylsulfoxide reductase, chain B; KEGG: sbc:SbBS512_E2433 dimethylsulfoxide reductase, B subunit; dimethylsulfoxide reductase subunit B complement(3062143..3062760) Escherichia coli KO11FL 11777685 YP_005278596.1 CDS EKO11_2943 NC_016902.1 3062771 3065215 R KEGG: eoi:ECO111_0962 dimethyl sulfoxide reductase, anaerobic, subunit A; TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; anaerobic dimethyl sulfoxide reductase subunit A complement(3062771..3065215) Escherichia coli KO11FL 11777686 YP_005278597.1 CDS EKO11_2944 NC_016902.1 3065454 3066746 R KEGG: sbo:SBO_0826 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like; seryl-tRNA synthetase complement(3065454..3066746) Escherichia coli KO11FL 11777687 YP_005278598.1 CDS EKO11_2945 NC_016902.1 3066837 3068180 R KEGG: ssn:SSON_0893 recombination factor protein RarA; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; AAA ATPase complement(3066837..3068180) Escherichia coli KO11FL 11777688 YP_005278599.1 CDS EKO11_2946 NC_016902.1 3068191 3068802 R KEGG: sdy:SDY_2370 outer-membrane lipoprotein carrier protein; TIGRFAM: outer membrane lipoprotein carrier protein LolA; PFAM: outer membrane lipoprotein carrier protein LolA; outer membrane lipoprotein carrier protein LolA complement(3068191..3068802) Escherichia coli KO11FL 11777689 YP_005278600.1 CDS EKO11_2947 NC_016902.1 3068957 3073024 R PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: eoh:ECO103_0933 DNA translocase FtsK; cell division protein FtsK complement(3068957..3073024) Escherichia coli KO11FL 11777690 YP_005278601.1 CDS EKO11_2948 NC_016902.1 3073159 3073653 R KEGG: ent:Ent638_1413 leucine-responsive transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator complement(3073159..3073653) Escherichia coli KO11FL 11777691 YP_005278602.1 CDS EKO11_2949 NC_016902.1 3074198 3075163 D KEGG: sdy:SDY_2373 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; thioredoxin reductase 3074198..3075163 Escherichia coli KO11FL 11777692 YP_005278603.1 CDS EKO11_2950 NC_016902.1 3075286 3077052 D TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: eoh:ECO103_0930 cysteine/glutathione ABC transporter membrane/ATP-binding component; SMART: AAA ATPase; cysteine ABC transporter ATP-binding protein/permease 3075286..3077052 Escherichia coli KO11FL 11777693 YP_005278604.1 CDS EKO11_2951 NC_016902.1 3077053 3078774 D TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; KEGG: eoh:ECO103_0929 cysteine/glutathione ABC transporter membrane/ATP-binding component; SMART: AAA ATPase; cysteine ABC transporter ATP-binding protein/permease 3077053..3078774 Escherichia coli KO11FL 11777694 YP_005278605.1 CDS EKO11_2952 NC_016902.1 3078816 3079520 D TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; KEGG: sbc:SbBS512_E2444 leucyl/phenylalanyl-tRNA--protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase; leucyl/phenylalanyl-tRNA/protein transferase 3078816..3079520 Escherichia coli KO11FL 11777695 YP_005278606.1 CDS EKO11_2953 NC_016902.1 3079805 3080023 D KEGG: cro:ROD_09485 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein; translation initiation factor IF-1 3079805..3080023 Escherichia coli KO11FL 11777696 YP_005278607.1 CDS EKO11_2954 NC_016902.1 3080708 3082984 R TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: ssn:SSON_0883 ATP-dependent Clp protease ATP-binding subunit; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding protein ClpA complement(3080708..3082984) Escherichia coli KO11FL 11777698 YP_005278608.1 CDS EKO11_2955 NC_016902.1 3083015 3083335 R PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: sdy:SDY_2380 ATP-dependent Clp protease adaptor protein ClpS; ATP-dependent Clp protease adaptor protein ClpS complement(3083015..3083335) Escherichia coli KO11FL 11777699 YP_005278609.1 CDS EKO11_2956 NC_016902.1 3083658 3083882 D TIGRFAM: cold shock domain protein CspD; PFAM: Cold-shock protein DNA-binding; KEGG: sdy:SDY_2381 stationary phase/starvation inducible regulatory protein CspD; SMART: Cold shock protein; cold-shock protein 3083658..3083882 Escherichia coli KO11FL 11777700 YP_005278610.1 CDS EKO11_2957 NC_016902.1 3083955 3085901 R KEGG: ebd:ECBD_2715 macrolide transporter ATP-binding/permease protein; PFAM: protein of unknown function DUF214; ABC transporter related; SMART: AAA ATPase; hypothetical protein complement(3083955..3085901) Escherichia coli KO11FL 11777701 YP_005278611.1 CDS EKO11_2958 NC_016902.1 3085898 3087013 R manually curated; TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: sbc:SbBS512_E2451 macrolide transporter subunit MacA; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit complement(3085898..3087013) Escherichia coli KO11FL 11777702 YP_005278612.1 CDS EKO11_2959 NC_016902.1 3087128 3088120 D PFAM: protein of unknown function DUF535; KEGG: eoi:ECO111_0946 hypothetical protein; hypothetical protein 3087128..3088120 Escherichia coli KO11FL 11779615 YP_005278613.1 CDS EKO11_2960 NC_016902.1 3088117 3089775 R KEGG: sfx:S0876 hypothetical protein; hypothetical protein complement(3088117..3089775) Escherichia coli KO11FL 11779616 YP_005278614.1 CDS EKO11_2961 NC_016902.1 3090201 3090896 D KEGG: sfv:SFV_0863 aquaporin Z; TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; MIP family channel protein 3090201..3090896 Escherichia coli KO11FL 11777703 YP_005278615.1 CDS EKO11_2962 NC_016902.1 3091391 3092290 D PFAM: protein of unknown function DUF340 membrane; KEGG: sbo:SBO_0807 putative surface protein; hypothetical protein 3091391..3092290 Escherichia coli KO11FL 11777704 YP_005278616.1 CDS EKO11_2963 NC_016902.1 3092434 3094086 D KEGG: eoh:ECO103_0917 hydroxylamine reductase; TIGRFAM: hybrid cluster protein; PFAM: Prismane; hybrid cluster protein 3092434..3094086 Escherichia coli KO11FL 11777705 YP_005278617.1 CDS EKO11_2964 NC_016902.1 3094098 3095066 D PFAM: ferredoxin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: sbc:SbBS512_E2459 HCP oxidoreductase, NADH-dependent; ferredoxin 3094098..3095066 Escherichia coli KO11FL 11779617 YP_005278618.1 CDS EKO11_2965 NC_016902.1 3095199 3096917 D PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; KEGG: sbc:SbBS512_E2460 pyruvate dehydrogenase; thiamine pyrophosphate TPP-binding domain-containing protein 3095199..3096917 Escherichia coli KO11FL 11777706 YP_005278619.1 CDS EKO11_2966 NC_016902.1 3096954 3097955 D KEGG: sfv:SFV_0858 L-threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; threonine aldolase 3096954..3097955 Escherichia coli KO11FL 11777707 YP_005278620.1 CDS EKO11_2967 NC_016902.1 3097966 3099396 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: sbc:SbBS512_E2462 NAD dependent epimerase/dehydratase family protein; NAD-dependent epimerase/dehydratase 3097966..3099396 Escherichia coli KO11FL 11777708 YP_005278621.1 CDS EKO11_2968 NC_016902.1 3099495 3100508 D PFAM: NAD-dependent epimerase/dehydratase; KEGG: ebd:ECBD_2726 NAD-dependent epimerase/dehydratase; NAD-dependent epimerase/dehydratase 3099495..3100508 Escherichia coli KO11FL 11777709 YP_005278622.1 CDS EKO11_2969 NC_016902.1 3100505 3101335 R KEGG: eoj:ECO26_0994 1,6-anhydro-N-acetylmuramic acid-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD complement(3100505..3101335) Escherichia coli KO11FL 11777710 YP_005278623.1 CDS EKO11_2970 NC_016902.1 3101332 3101655 R PFAM: protein of unknown function DUF74; KEGG: sdy:SDY_2397 hypothetical protein; hypothetical protein complement(3101332..3101655) Escherichia coli KO11FL 11779618 YP_005278624.1 CDS EKO11_2971 NC_016902.1 3101781 3102296 D KEGG: ebd:ECBD_2729 putative lipoprotein; putative lipoprotein 3101781..3102296 Escherichia coli KO11FL 11777711 YP_005278625.1 CDS EKO11_2972 NC_016902.1 3102514 3103242 D KEGG: sdy:SDY_2404 arginine transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3102514..3103242 Escherichia coli KO11FL 11777712 YP_005278626.1 CDS EKO11_2973 NC_016902.1 3103260 3103991 D TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: sbc:SbBS512_E2468 arginine ABC transporter, periplasmic arginine-binding protein ArtI; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; cationic amino acid ABC transporter substrate-binding protein 3103260..3103991 Escherichia coli KO11FL 11777713 YP_005278627.1 CDS EKO11_2974 NC_016902.1 3103998 3104714 D KEGG: sbo:SBO_0796 arginine transporter permease subunit ArtQ; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 3103998..3104714 Escherichia coli KO11FL 11777714 YP_005278628.1 CDS EKO11_2975 NC_016902.1 3104714 3105382 D KEGG: sbc:SbBS512_E2470 arginine transporter permease subunit ArtM; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 3104714..3105382 Escherichia coli KO11FL 11777715 YP_005278629.1 CDS EKO11_2976 NC_016902.1 3105674 3106405 D TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: sbo:SBO_0794 arginine 3rd transport system periplasmic binding protein; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; cationic amino acid ABC transporter substrate-binding protein 3105674..3106405 Escherichia coli KO11FL 11777716 YP_005278630.1 CDS EKO11_2977 NC_016902.1 3106580 3107707 R KEGG: eoh:ECO103_0903 23S rRNA methyluridine methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumB; PFAM: (Uracil-5)-methyltransferase; 23S rRNA (uracil-5-)-methyltransferase RumB complement(3106580..3107707) Escherichia coli KO11FL 11777717 YP_005278631.1 CDS EKO11_2978 NC_016902.1 3107748 3108236 R PFAM: Protein of unknown function DUF2593; KEGG: sdy:SDY_0737 hypothetical protein; hypothetical protein complement(3107748..3108236) Escherichia coli KO11FL 11777718 YP_005278632.1 CDS EKO11_2979 NC_016902.1 3108296 3109141 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbc:SbBS512_E2474 putrescine transporter subunit: membrane component of ABC superfamily; binding-protein-dependent transport system inner membrane protein complement(3108296..3109141) Escherichia coli KO11FL 11777719 YP_005278633.1 CDS EKO11_2980 NC_016902.1 3109138 3110091 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sfx:S0852 putrescine transporter subunit: membrane component of ABC superfamily; binding-protein-dependent transport system inner membrane protein complement(3109138..3110091) Escherichia coli KO11FL 11777720 YP_005278634.1 CDS EKO11_2981 NC_016902.1 3110101 3111315 R SMART: AAA ATPase; manually curated; KEGG: eoh:ECO103_0899 putrescine transporter ATP-binding subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; spermidine/putrescine ABC transporter ATPase complement(3110101..3111315) Escherichia coli KO11FL 11777721 YP_005278635.1 CDS EKO11_2982 NC_016902.1 3111329 3112441 R PFAM: extracellular solute-binding protein family 1; KEGG: ebd:ECBD_2740 putrescine transporter subunit: periplasmic-binding component of ABC superfamily; extracellular solute-binding protein complement(3111329..3112441) Escherichia coli KO11FL 11777722 YP_005278636.1 CDS EKO11_2983 NC_016902.1 3112792 3113268 R PFAM: Sensory transduction regulator, putative; KEGG: sbc:SbBS512_E2479 tetratricopeptide repeat protein; Sensory transduction regulator complement(3112792..3113268) Escherichia coli KO11FL 11777723 YP_005278637.1 CDS EKO11_2984 NC_016902.1 3113356 3114258 R KEGG: sdy:SDY_0743 ribosomal protein S6 modification protein; TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: RimK domain protein ATP-grasp; alpha-L-glutamate ligase complement(3113356..3114258) Escherichia coli KO11FL 11777724 YP_005278638.1 CDS EKO11_2985 NC_016902.1 3114319 3115041 R PFAM: nitroreductase; KEGG: sbc:SbBS512_E2481 nitroreductase A; nitroreductase complement(3114319..3115041) Escherichia coli KO11FL 11779619 YP_005278639.1 CDS EKO11_2986 NC_016902.1 3115025 3115312 R PFAM: protein of unknown function DUF1418; KEGG: sbc:SbBS512_E2482 hypothetical protein; hypothetical protein complement(3115025..3115312) Escherichia coli KO11FL 11777725 YP_005278640.1 CDS EKO11_2987 NC_016902.1 3115472 3115729 D KEGG: sbo:SBO_0783 glutaredoxin 1; TIGRFAM: glutaredoxin, GrxA family; PFAM: glutaredoxin; GrxA family glutaredoxin 3115472..3115729 Escherichia coli KO11FL 11777726 YP_005278641.1 CDS EKO11_2988 NC_016902.1 3115759 3116136 R KEGG: sdy:SDY_0747 hypothetical protein; hypothetical protein complement(3115759..3116136) Escherichia coli KO11FL 11779620 YP_005278642.1 CDS EKO11_2989 NC_016902.1 3116406 3118091 D manually curated; TIGRFAM: YidE/YbjL duplication; KEGG: sbc:SbBS512_E2485 hypothetical protein; PFAM: YidE/YbjL duplication domain-containing protein; TrkA-C domain protein; YidE/YbjL duplication 3116406..3118091 Escherichia coli KO11FL 11777727 YP_005278643.1 CDS EKO11_2990 NC_016902.1 3118327 3118545 R PFAM: transcriptional activator Ogr/delta; KEGG: sbc:SbBS512_E2486 phage transcriptional activator, Ogr/delta; transcriptional activator Ogr/delta complement(3118327..3118545) Escherichia coli KO11FL 11777728 YP_005278644.1 CDS EKO11_2991 NC_016902.1 3118636 3119736 R KEGG: stt:t3444 putative regulator of late gene expression; putative regulator of late gene expression complement(3118636..3119736) Escherichia coli KO11FL 11777729 YP_005278645.1 CDS EKO11_2992 NC_016902.1 3119733 3120218 R PFAM: P2 GpU family protein; KEGG: sbc:SbBS512_E2488 phage protein gpU; P2 GpU family protein complement(3119733..3120218) Escherichia coli KO11FL 11777730 YP_005278646.1 CDS EKO11_2993 NC_016902.1 3120215 3123292 R KEGG: stt:t2662 putative bacteriophage tail protein; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region; phage tail tape measure protein, TP901 family complement(3120215..3123292) Escherichia coli KO11FL 11777731 YP_005278647.1 CDS EKO11_2995 NC_016902.1 3123419 3123721 R PFAM: tail E family protein; KEGG: stt:t3440 putative phage tail protein; tail E family protein complement(3123419..3123721) Escherichia coli KO11FL 11777733 YP_005278648.1 CDS EKO11_2996 NC_016902.1 3123776 3124291 R KEGG: sbc:SbBS512_E2492 phage major tail tube protein FII; TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein; phage major tail tube protein complement(3123776..3124291) Escherichia coli KO11FL 11777734 YP_005278649.1 CDS EKO11_2997 NC_016902.1 3124301 3125473 R KEGG: sbc:SbBS512_E2493 major tail sheath protein; major tail sheath protein complement(3124301..3125473) Escherichia coli KO11FL 11777735 YP_005278650.1 CDS EKO11_2998 NC_016902.1 3125616 3126182 R PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: sbo:SBO_0773 inversion of adjacent DNA; at locus of E14 element; Resolvase domain-containing protein complement(3125616..3126182) Escherichia coli KO11FL 11777736 YP_005278651.1 CDS EKO11_2999 NC_016902.1 3126213 3126716 D PFAM: Tail Collar domain protein; KEGG: ebd:ECBD_2751 tail collar domain protein; Tail Collar domain-containing protein 3126213..3126716 Escherichia coli KO11FL 11777737 YP_005278652.1 CDS EKO11_3000 NC_016902.1 3126716 3127321 D PFAM: tail assembly chaperone gp38; KEGG: eoh:ECO103_3089 putative tail fiber assembly; tail assembly chaperone gp38 3126716..3127321 Escherichia coli KO11FL 11779621 YP_005278653.1 CDS EKO11_3001 NC_016902.1 3127290 3127478 R KEGG: sus:Acid_5342 hypothetical protein; hypothetical protein complement(3127290..3127478) Escherichia coli KO11FL 11777738 YP_005278654.1 CDS EKO11_3003 NC_016902.1 3128734 3130125 R KEGG: stt:t3433 variable tail fiber protein; hypothetical protein complement(3128734..3130125) Escherichia coli KO11FL 11777740 YP_005278655.1 CDS EKO11_3004 NC_016902.1 3130122 3130727 R TIGRFAM: phage tail protein I; KEGG: ebd:ECBD_2755 phage tail protein I; phage tail protein I complement(3130122..3130727) Escherichia coli KO11FL 11777741 YP_005278656.1 CDS EKO11_3005 NC_016902.1 3130720 3131628 R PFAM: Baseplate J family protein; KEGG: stt:t3431 phage baseplate assembly protein; baseplate J family protein complement(3130720..3131628) Escherichia coli KO11FL 11777742 YP_005278657.1 CDS EKO11_3006 NC_016902.1 3131615 3131974 R PFAM: GPW/gp25 family protein; KEGG: stt:t3430 phage baseplate assembly protein; GPW/gp25 family protein complement(3131615..3131974) Escherichia coli KO11FL 11777743 YP_005278658.1 CDS EKO11_3007 NC_016902.1 3131971 3132549 R TIGRFAM: phage baseplate assembly protein V; KEGG: ebd:ECBD_2758 phage baseplate assembly protein V; phage baseplate assembly protein V complement(3131971..3132549) Escherichia coli KO11FL 11777744 YP_005278659.1 CDS EKO11_3008 NC_016902.1 3132875 3133540 D KEGG: cps:CPS_1939 sensory box sensor histidine kinase/response regulator; hypothetical protein 3132875..3133540 Escherichia coli KO11FL 11777745 YP_005278660.1 CDS EKO11_3009 NC_016902.1 3133596 3134042 R TIGRFAM: phage virion morphogenesis protein; KEGG: stt:t3428 putative phage tail protein; phage virion morphogenesis protein complement(3133596..3134042) Escherichia coli KO11FL 11779622 YP_005278661.1 CDS EKO11_3010 NC_016902.1 3134035 3134466 R KEGG: sed:SeD_A3040 phage tail completion protein R; phage tail completion protein R complement(3134035..3134466) Escherichia coli KO11FL 11777746 YP_005278662.1 CDS EKO11_3011 NC_016902.1 3134429 3134602 R manually curated; KEGG: ebr:ECB_00837 Fels-2 prophage protein; Fels-2 prophage protein complement(3134429..3134602) Escherichia coli KO11FL 11779623 YP_005278663.1 CDS EKO11_3012 NC_016902.1 3134562 3134990 R TIGRFAM: phage lysis regulatory protein, LysB family; KEGG: sbo:SBO_0767 putative regulatory protein; phage lysis regulatory protein, LysB family complement(3134562..3134990) Escherichia coli KO11FL 11779624 YP_005278664.1 CDS EKO11_3013 NC_016902.1 3134987 3135364 R KEGG: stt:t3425 hypothetical protein; hypothetical protein complement(3134987..3135364) Escherichia coli KO11FL 11777747 YP_005278665.1 CDS EKO11_3014 NC_016902.1 3135366 3135878 R PFAM: glycoside hydrolase family 24; KEGG: sed:SeD_A3043 phage lysozyme; glycoside hydrolase family protein complement(3135366..3135878) Escherichia coli KO11FL 11777748 YP_005278666.1 CDS EKO11_3015 NC_016902.1 3135859 3136074 R KEGG: sbo:SBO_0764 secretory protein; secretory protein complement(3135859..3136074) Escherichia coli KO11FL 11777749 YP_005278667.1 CDS EKO11_3016 NC_016902.1 3136078 3136281 R PFAM: tail X family protein; KEGG: sbo:SBO_0763 phage tail protein; tail X family protein complement(3136078..3136281) Escherichia coli KO11FL 11777750 YP_005278668.1 CDS EKO11_3017 NC_016902.1 3136281 3136745 R PFAM: head completion protein; KEGG: sea:SeAg_B2864 phage head completion protein; head completion protein complement(3136281..3136745) Escherichia coli KO11FL 11777751 YP_005278669.1 CDS EKO11_3018 NC_016902.1 3136841 3137491 R PFAM: small terminase subunit; KEGG: sed:SeD_A3047 terminase, endonuclease subunit; small terminase subunit complement(3136841..3137491) Escherichia coli KO11FL 11777752 YP_005278670.1 CDS EKO11_3019 NC_016902.1 3137495 3138553 R KEGG: sed:SeD_A3048 phage major capsid protein, P2 family; TIGRFAM: phage major capsid protein, P2 family; PFAM: major capsid protein P2; phage major capsid protein, P2 family complement(3137495..3138553) Escherichia coli KO11FL 11777753 YP_005278671.1 CDS EKO11_3020 NC_016902.1 3138570 3139403 R PFAM: capsid scaffolding; KEGG: sbo:SBO_0759 putative capsid scaffolding protein; capsid scaffolding complement(3138570..3139403) Escherichia coli KO11FL 11777754 YP_005278672.1 CDS EKO11_3021 NC_016902.1 3139546 3141312 D KEGG: stt:t3417 terminase ATPase subunit; terminase ATPase subunit 3139546..3141312 Escherichia coli KO11FL 11777755 YP_005278673.1 CDS EKO11_3022 NC_016902.1 3141312 3142337 D KEGG: ebd:ECBD_2765 phage portal protein, PBSX family; TIGRFAM: phage portal protein, PBSX family; PFAM: portal protein; phage portal protein, PBSX family 3141312..3142337 Escherichia coli KO11FL 11777756 YP_005278674.1 CDS EKO11_3023 NC_016902.1 3142378 3144159 R PFAM: protein of unknown function DUF262; KEGG: rlt:Rleg2_2200 protein of unknown function DUF262; hypothetical protein complement(3142378..3144159) Escherichia coli KO11FL 11777757 YP_005278675.1 CDS EKO11_3024 NC_016902.1 3144692 3145027 D KEGG: ebd:ECBD_2768 hypothetical protein; hypothetical protein 3144692..3145027 Escherichia coli KO11FL 11779625 YP_005278676.1 CDS EKO11_3025 NC_016902.1 3145220 3145453 R PFAM: DinI family protein; KEGG: sbo:SBO_0753 putative damage-inducible protein; DinI family protein complement(3145220..3145453) Escherichia coli KO11FL 11777758 YP_005278677.1 CDS EKO11_3026 NC_016902.1 3145464 3145652 R KEGG: ebd:ECBD_2770 hypothetical protein; hypothetical protein complement(3145464..3145652) Escherichia coli KO11FL 11777759 YP_005278678.1 CDS EKO11_3027 NC_016902.1 3145805 3148219 R PFAM: replication gene A; KEGG: ebr:ECB_00825 putative replication protein for prophage; replication protein A complement(3145805..3148219) Escherichia coli KO11FL 11777760 YP_005278679.1 CDS EKO11_3028 NC_016902.1 3148216 3149073 R KEGG: sed:SeD_A3058 retron adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; DNA adenine methylase complement(3148216..3149073) Escherichia coli KO11FL 11777761 YP_005278680.1 CDS EKO11_3029 NC_016902.1 3149070 3149297 R TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; KEGG: stt:t3408 hypothetical protein; TraR/DksA family transcriptional regulator complement(3149070..3149297) Escherichia coli KO11FL 11777762 YP_005278681.1 CDS EKO11_3030 NC_016902.1 3149297 3149530 R KEGG: ebr:ECB_00822 hypothetical protein; hypothetical protein complement(3149297..3149530) Escherichia coli KO11FL 11777763 YP_005278682.1 CDS EKO11_3031 NC_016902.1 3149598 3149939 R KEGG: stt:t3406 hypothetical protein; hypothetical protein complement(3149598..3149939) Escherichia coli KO11FL 11777764 YP_005278683.1 CDS EKO11_3032 NC_016902.1 3150021 3150269 D KEGG: pop:POPTR_873790 hypothetical protein; hypothetical protein 3150021..3150269 Escherichia coli KO11FL 11777765 YP_005278684.1 CDS EKO11_3033 NC_016902.1 3150355 3150651 R KEGG: ebr:ECB_00820 hypothetical protein; hypothetical protein complement(3150355..3150651) Escherichia coli KO11FL 11777766 YP_005278685.1 CDS EKO11_3034 NC_016902.1 3150659 3151168 R KEGG: eta:ETA_05560 phage regulatory protein; phage regulatory protein complement(3150659..3151168) Escherichia coli KO11FL 11777767 YP_005278686.1 CDS EKO11_3035 NC_016902.1 3151234 3151437 R KEGG: ent:Ent638_1343 putative regulator for prophage; putative regulator for prophage complement(3151234..3151437) Escherichia coli KO11FL 11777768 YP_005278687.1 CDS EKO11_3036 NC_016902.1 3151497 3152147 D KEGG: ypy:YPK_0883 CI repressor; manually curated; PFAM: CI repressor; CI repressor 3151497..3152147 Escherichia coli KO11FL 11777769 YP_005278688.1 CDS EKO11_3037 NC_016902.1 3152148 3153599 D PFAM: KAP P-loop domain protein; KEGG: sdn:Sden_3526 KAP P-loop; KAP P-loop domain-containing protein 3152148..3153599 Escherichia coli KO11FL 11779626 YP_005278689.1 CDS EKO11_3038 NC_016902.1 3153680 3154732 D PFAM: integrase family protein; KEGG: stt:t3400 bacteriophage integrase; integrase family protein 3153680..3154732 Escherichia coli KO11FL 11779627 YP_005278690.1 CDS EKO11_3039 NC_016902.1 3154837 3155373 R PFAM: regulatory protein TetR; KEGG: sbc:SbBS512_E2499 transcriptional regulator, TetR family; TetR family transcriptional regulator complement(3154837..3155373) Escherichia coli KO11FL 11777770 YP_005278691.1 CDS EKO11_3040 NC_016902.1 3155457 3156665 D KEGG: sbo:SBO_0741 putative DeoR-type transcriptional regulator; manually curated; PFAM: major facilitator superfamily MFS_1; major facilitator superfamily protein 3155457..3156665 Escherichia coli KO11FL 11777771 YP_005278692.1 CDS EKO11_3041 NC_016902.1 3156665 3157480 D KEGG: eoh:ECO103_0888 hypothetical protein; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; cof family hydrolase 3156665..3157480 Escherichia coli KO11FL 11777772 YP_005278693.1 CDS EKO11_3042 NC_016902.1 3157572 3157850 D KEGG: sfv:SFV_0828 hypothetical protein; hypothetical protein 3157572..3157850 Escherichia coli KO11FL 11777773 YP_005278694.1 CDS EKO11_3043 NC_016902.1 3157891 3159123 R PFAM: major facilitator superfamily MFS_1; KEGG: eoh:ECO103_0886 multidrug efflux system protein Cmr; major facilitator superfamily protein complement(3157891..3159123) Escherichia coli KO11FL 11777774 YP_005278695.1 CDS EKO11_3044 NC_016902.1 3159408 3160004 D PFAM: phosphoesterase PA-phosphatase related; KEGG: sdy:SDY_0843 undecaprenyl pyrophosphate phosphatase; SMART: phosphoesterase PA-phosphatase related; undecaprenyl-diphosphatase 3159408..3160004 Escherichia coli KO11FL 11777775 YP_005278696.1 CDS EKO11_3045 NC_016902.1 3160062 3160820 D KEGG: eoh:ECO103_0884 DNA-binding transcriptional repressor DeoR; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator 3160062..3160820 Escherichia coli KO11FL 11777776 YP_005278697.1 CDS EKO11_3046 NC_016902.1 3160867 3162069 R KEGG: eok:G2583_1069 penicillin-binding protein 6; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; Beta-lactamase complement(3160867..3162069) Escherichia coli KO11FL 11777777 YP_005278698.1 CDS EKO11_3047 NC_016902.1 3162316 3162942 D PFAM: Glutathione S-transferase domain; KEGG: sfx:S0831 putative transferase; glutathione S-transferase 3162316..3162942 Escherichia coli KO11FL 11777778 YP_005278699.1 CDS EKO11_3048 NC_016902.1 3162939 3164054 R KEGG: sbo:SBO_0733 putative dehydrogenase; putative dehydrogenase complement(3162939..3164054) Escherichia coli KO11FL 11777779 YP_005278700.1 CDS EKO11_3049 NC_016902.1 3164165 3164548 R KEGG: sbc:SbBS512_E2509 biofilm formation regulatory protein BssR; biofilm formation regulatory protein BssR complement(3164165..3164548) Escherichia coli KO11FL 11777780 YP_005278701.1 CDS EKO11_3050 NC_016902.1 3164761 3166086 D TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: protein of unknown function UPF0004 ; Radical SAM domain protein; KEGG: sbo:SBO_0727 hypothetical protein; SMART: Elongator protein 3/MiaB/NifB; MiaB-like tRNA modifying enzyme YliG 3164761..3166086 Escherichia coli KO11FL 11777781 YP_005278702.1 CDS EKO11_3051 NC_016902.1 3166133 3167461 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: eok:G2583_1062 hypothetical protein; SMART: GGDEF domain containing protein; diguanylate cyclase complement(3166133..3167461) Escherichia coli KO11FL 11777782 YP_005278703.1 CDS EKO11_3052 NC_016902.1 3167469 3169817 R KEGG: eoh:ECO103_0877 hypothetical protein; PFAM: EAL domain protein; SMART: EAL domain protein; diguanylate phosphodiesterase complement(3167469..3169817) Escherichia coli KO11FL 11777783 YP_005278704.1 CDS EKO11_3053 NC_016902.1 3169995 3170906 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbc:SbBS512_E2516 glutathione ABC transporter, permease protein GsiD; binding-protein-dependent transport system inner membrane protein complement(3169995..3170906) Escherichia coli KO11FL 11777784 YP_005278705.1 CDS EKO11_3054 NC_016902.1 3170909 3171829 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sdy:SDY_0756 putative transport system permease protein; binding-protein-dependent transport system inner membrane protein complement(3170909..3171829) Escherichia coli KO11FL 11779628 YP_005278706.1 CDS EKO11_3055 NC_016902.1 3171847 3173385 R PFAM: extracellular solute-binding protein family 5; KEGG: eoi:ECO111_0898 putative peptide transporter subunit; family 5 extracellular solute-binding protein complement(3171847..3173385) Escherichia coli KO11FL 11777785 YP_005278707.1 CDS EKO11_3056 NC_016902.1 3173405 3175276 R KEGG: eoh:ECO103_0873 glutathione transporter ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; ABC transporter complement(3173405..3175276) Escherichia coli KO11FL 11777786 YP_005278708.1 CDS EKO11_3057 NC_016902.1 3175263 3176228 R KEGG: ebd:ECBD_2795 L-asparaginase; PFAM: peptidase T2 asparaginase 2; Beta-aspartyl-peptidase complement(3175263..3176228) Escherichia coli KO11FL 11777787 YP_005278709.1 CDS EKO11_3058 NC_016902.1 3176432 3177667 D KEGG: eoj:ECO26_0954 molybdopterin biosynthesis protein MoeA; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV; molybdenum cofactor synthesis domain-containing protein 3176432..3177667 Escherichia coli KO11FL 11777788 YP_005278710.1 CDS EKO11_3059 NC_016902.1 3177667 3178416 D KEGG: sfx:S0819 molybdopterin biosynthesis protein MoeB; TIGRFAM: molybdopterin synthase sulfurylase MoeB; PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; molybdopterin synthase sulfurylase MoeB 3177667..3178416 Escherichia coli KO11FL 11777789 YP_005278711.1 CDS EKO11_3060 NC_016902.1 3178492 3179154 R TIGRFAM: transaldolase; KEGG: eoh:ECO103_0869 fructose-6-phosphate aldolase; PFAM: Transaldolase; transaldolase complement(3178492..3179154) Escherichia coli KO11FL 11777790 YP_005278712.1 CDS EKO11_3061 NC_016902.1 3179285 3180184 D TIGRFAM: glycyl-radical enzyme activating protein family; KEGG: ssn:SSON_0806 putative pyruvate formate-lyase 2 activating enzyme; PFAM: Radical SAM domain protein; glycyl-radical enzyme activating protein family 3179285..3180184 Escherichia coli KO11FL 11777791 YP_005278713.1 CDS EKO11_3062 NC_016902.1 3180190 3182622 D TIGRFAM: pyruvate formate-lyase; KEGG: eoh:ECO103_0867 putative pyruvate formate lyase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical; pyruvate formate-lyase 3180190..3182622 Escherichia coli KO11FL 11777792 YP_005278714.1 CDS EKO11_3063 NC_016902.1 3182768 3183583 D KEGG: eoi:ECO111_0890 putative hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; cof family hydrolase 3182768..3183583 Escherichia coli KO11FL 11777793 YP_005278715.1 CDS EKO11_3064 NC_016902.1 3183735 3185000 D PFAM: protein of unknown function DUF1479; KEGG: ebd:ECBD_2802 protein of unknown function DUF1479; hypothetical protein 3183735..3185000 Escherichia coli KO11FL 11777794 YP_005278716.1 CDS EKO11_3065 NC_016902.1 3185256 3186236 R PFAM: transposase IS116/IS110/IS902 family protein; KEGG: eoh:ECO103_4940 putative IS621 transposase; transposase IS116/IS110/IS902 family protein complement(3185256..3186236) Escherichia coli KO11FL 11777795 YP_005278717.1 CDS EKO11_3066 NC_016902.1 3186515 3188107 R KEGG: efe:EFER_0963 putative transporter fused subunits of ABC superfamily: ATP-binding components; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(3186515..3188107) Escherichia coli KO11FL 11779629 YP_005278718.1 CDS EKO11_3067 NC_016902.1 3188326 3189246 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: sdy:SDY_0777 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 3188326..3189246 Escherichia coli KO11FL 11777796 YP_005278719.1 CDS EKO11_3068 NC_016902.1 3189305 3190423 R PFAM: Citrate transporter; KEGG: ssn:SSON_0797 hypothetical protein; citrate transporter complement(3189305..3190423) Escherichia coli KO11FL 11777797 YP_005278720.1 CDS EKO11_3069 NC_016902.1 3190420 3190887 R KEGG: sbc:SbBS512_E2531 manganese transport regulator MntR; PFAM: iron dependent repressor; SMART: iron dependent repressor; DtxR family iron (metal) dependent repressor complement(3190420..3190887) Escherichia coli KO11FL 11779630 YP_005278721.1 CDS EKO11_3070 NC_016902.1 3191073 3191201 D KEGG: ebd:ECBD_2807 hypothetical protein; hypothetical protein 3191073..3191201 Escherichia coli KO11FL 11777798 YP_005278722.1 CDS EKO11_3071 NC_016902.1 3191473 3193056 D PFAM: sulfatase; KEGG: eoh:ECO103_0851 putative hydrolase, inner membrane; sulfatase 3191473..3193056 Escherichia coli KO11FL 11777799 YP_005278723.1 CDS EKO11_3072 NC_016902.1 3193105 3193620 R PFAM: virulence-related outer membrane protein; KEGG: sdy:SDY_0781 outer membrane protein X; virulence-related outer membrane protein complement(3193105..3193620) Escherichia coli KO11FL 11777800 YP_005278724.1 CDS EKO11_3073 NC_016902.1 3193973 3194860 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: eoh:ECO103_0849 threonine and homoserine efflux system; hypothetical protein 3193973..3194860 Escherichia coli KO11FL 11777801 YP_005278725.1 CDS EKO11_3074 NC_016902.1 3195159 3195662 D PFAM: Ferritin Dps family protein; KEGG: sdy:SDY_0783 DNA starvation/stationary phase protection protein Dps; ferritin Dps family protein 3195159..3195662 Escherichia coli KO11FL 11777802 YP_005278726.1 CDS EKO11_3075 NC_016902.1 3196066 3196812 D TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: sbo:SBO_0702 glutamine ABC transporter periplasmic protein; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; cationic amino acid ABC transporter substrate-binding protein 3196066..3196812 Escherichia coli KO11FL 11777803 YP_005278727.1 CDS EKO11_3076 NC_016902.1 3196951 3197610 D KEGG: sdy:SDY_0786 glutamine ABC transporter permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 3196951..3197610 Escherichia coli KO11FL 11777804 YP_005278728.1 CDS EKO11_3077 NC_016902.1 3197607 3198329 D KEGG: ssn:SSON_0789 glutamine ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3197607..3198329 Escherichia coli KO11FL 11777805 YP_005278729.1 CDS EKO11_3078 NC_016902.1 3198446 3200671 D PFAM: MscS Mechanosensitive ion channel; KEGG: eoi:ECO111_0869 hypothetical protein; mechanosensitive ion channel MscS 3198446..3200671 Escherichia coli KO11FL 11777806 YP_005278730.1 CDS EKO11_3079 NC_016902.1 3200668 3201594 R KEGG: sbc:SbBS512_E2543 putative SAM-dependent methyltransferase; PFAM: protein of unknown function DUF890; rRNA (adenine-N(6)-)-methyltransferase complement(3200668..3201594) Escherichia coli KO11FL 11777807 YP_005278731.1 CDS EKO11_3080 NC_016902.1 3201870 3202130 D KEGG: sbc:SbBS512_E2544 hypothetical protein; manually curated; PFAM: protein of unknown function DUF1471; hypothetical protein 3201870..3202130 Escherichia coli KO11FL 11777808 YP_005278732.1 CDS EKO11_3081 NC_016902.1 3202395 3204677 D KEGG: eoh:ECO103_0841 catecholate siderophore receptor Fiu; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; TonB-dependent siderophore receptor 3202395..3204677 Escherichia coli KO11FL 11779631 YP_005278733.1 CDS EKO11_3082 NC_016902.1 3204722 3205396 D KEGG: ebd:ECBD_2819 putative hydroxylase; PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; 2OG-Fe(II) oxygenase 3204722..3205396 Escherichia coli KO11FL 11777809 YP_005278734.1 CDS EKO11_3083 NC_016902.1 3205470 3205736 D KEGG: ssn:SSON_0782 hypothetical protein; TraR/DksA family transcriptional regulator 3205470..3205736 Escherichia coli KO11FL 11777810 YP_005278735.1 CDS EKO11_3084 NC_016902.1 3206001 3206261 D PFAM: protein of unknown function DUF1471; KEGG: sfv:SFV_0785 hypothetical protein; hypothetical protein 3206001..3206261 Escherichia coli KO11FL 11777811 YP_005278736.1 CDS EKO11_3085 NC_016902.1 3206490 3207575 R PFAM: Malate/L-lactate dehydrogenase; KEGG: ssn:SSON_0780 hypothetical protein; malate/L-lactate dehydrogenase complement(3206490..3207575) Escherichia coli KO11FL 11777812 YP_005278737.1 CDS EKO11_3086 NC_016902.1 3207716 3208678 R PFAM: Glycosyl transferase, family 3-like; KEGG: eoh:ECO103_0836 glycosyl transferase family protein; glycosyl transferase family protein complement(3207716..3208678) Escherichia coli KO11FL 11777813 YP_005278738.1 CDS EKO11_3087 NC_016902.1 3208706 3210991 R SMART: helicase c2; DEAD-like helicase ; Helicase-like, DEXD box c2 type; KEGG: sfv:SFV_0781 ATP-dependent DNA helicase DinG; helicase c2 complement(3208706..3210991) Escherichia coli KO11FL 11779632 YP_005278739.1 CDS EKO11_3088 NC_016902.1 3211009 3211458 D PFAM: Conserved hypothetical protein CHP02464; KEGG: efe:EFER_2310 hypothetical protein; hypothetical protein 3211009..3211458 Escherichia coli KO11FL 11777814 YP_005278740.1 CDS EKO11_3089 NC_016902.1 3211690 3213054 R KEGG: ebd:ECBD_2826 ATP-dependent RNA helicase RhlE; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; DEAD/DEAH box helicase complement(3211690..3213054) Escherichia coli KO11FL 11777815 YP_005278741.1 CDS EKO11_3090 NC_016902.1 3213283 3213954 D PFAM: Transcriptional regulator TetR ; regulatory protein TetR; KEGG: sdy:SDY_0807 putative DNA-binding transcriptional regulator; Transcriptional regulator TetR 3213283..3213954 Escherichia coli KO11FL 11777816 YP_005278742.1 CDS EKO11_3091 NC_016902.1 3213957 3214952 D PFAM: secretion protein HlyD family protein; KEGG: eoh:ECO103_0831 hypothetical protein; secretion protein HlyD family protein 3213957..3214952 Escherichia coli KO11FL 11777817 YP_005278743.1 CDS EKO11_3092 NC_016902.1 3214945 3216681 D KEGG: eoi:ECO111_0855 fused putative transporter subunits of ABC superfamily: ATP-binding components; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3214945..3216681 Escherichia coli KO11FL 11777818 YP_005278744.1 CDS EKO11_3093 NC_016902.1 3216674 3217807 D PFAM: ABC-2 type transporter; KEGG: ssn:SSON_0772 hypothetical protein; ABC transporter 3216674..3217807 Escherichia coli KO11FL 11777819 YP_005278745.1 CDS EKO11_3094 NC_016902.1 3217818 3218924 D PFAM: ABC-2 type transporter; KEGG: sbc:SbBS512_E2561 ABC-2 type transporter, permease protein; ABC transporter 3217818..3218924 Escherichia coli KO11FL 11779633 YP_005278746.1 CDS EKO11_3095 NC_016902.1 3218886 3219296 R KEGG: sbc:SbBS512_E2560 hypothetical protein; hypothetical protein complement(3218886..3219296) Escherichia coli KO11FL 11777820 YP_005278747.1 CDS EKO11_3096 NC_016902.1 3219429 3220190 D PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ssn:SSON_0769 hypothetical protein; endonuclease/exonuclease/phosphatase 3219429..3220190 Escherichia coli KO11FL 11777821 YP_005278748.1 CDS EKO11_3097 NC_016902.1 3220187 3221428 D KEGG: eok:G2583_1017 putative cardiolipin synthetase YbhO; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; phospholipase D/Transphosphatidylase 3220187..3221428 Escherichia coli KO11FL 11777822 YP_005278749.1 CDS EKO11_3098 NC_016902.1 3221428 3222384 D KEGG: eoh:ECO103_0824 hypothetical protein; hypothetical protein 3221428..3222384 Escherichia coli KO11FL 11777823 YP_005278750.1 CDS EKO11_3099 NC_016902.1 3222420 3223133 R PFAM: protein of unknown function UPF0005; KEGG: eoi:ECO111_0848 hypothetical protein; hypothetical protein complement(3222420..3223133) Escherichia coli KO11FL 11777824 YP_005278751.1 CDS EKO11_3100 NC_016902.1 3223338 3224123 R KEGG: sbc:SbBS512_E2566 hypothetical protein; manually curated; PFAM: protein of unknown function UPF0005; hypothetical protein complement(3223338..3224123) Escherichia coli KO11FL 11777825 YP_005278752.1 CDS EKO11_3101 NC_016902.1 3224179 3224631 R PFAM: molybdopterin biosynthesis MoaE protein; KEGG: ssn:SSON_0764 molybdopterin guanine dinucleotide biosynthesis protein MoaE; molybdopterin biosynthesis protein MoaE complement(3224179..3224631) Escherichia coli KO11FL 11777826 YP_005278753.1 CDS EKO11_3102 NC_016902.1 3224633 3224878 R KEGG: sbc:SbBS512_E2568 molybdopterin synthase small subunit; TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein; molybdopterin converting factor subunit 1 complement(3224633..3224878) Escherichia coli KO11FL 11777827 YP_005278754.1 CDS EKO11_3103 NC_016902.1 3224871 3225356 R KEGG: sdy:SDY_0823 molybdenum cofactor biosynthesis protein C; TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis protein MoaC; molybdenum cofactor biosynthesis protein C complement(3224871..3225356) Escherichia coli KO11FL 11777828 YP_005278755.1 CDS EKO11_3104 NC_016902.1 3225359 3225871 R KEGG: sbc:SbBS512_E2570 molybdenum cofactor biosynthesis protein B; TIGRFAM: molybdenum cofactor biosynthesis protein B; molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; molybdenum cofactor biosynthesis protein B complement(3225359..3225871) Escherichia coli KO11FL 11777829 YP_005278756.1 CDS EKO11_3105 NC_016902.1 3225893 3226882 R TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: molybdenum cofactor synthesis domain protein; Radical SAM domain protein; KEGG: sbo:SBO_0668 molybdenum cofactor biosynthesis protein A; SMART: Elongator protein 3/MiaB/NifB; molybdenum cofactor biosynthesis protein A complement(3225893..3226882) Escherichia coli KO11FL 11777830 YP_005278757.1 CDS EKO11_3106 NC_016902.1 3227279 3228187 D PFAM: protein of unknown function UPF0052 and CofD; KEGG: sbc:SbBS512_E2572 hypothetical protein; hypothetical protein 3227279..3228187 Escherichia coli KO11FL 11779634 YP_005278758.1 CDS EKO11_3107 NC_016902.1 3228379 3230400 R TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; type III restriction protein res subunit; UvrB/UvrC protein; KEGG: sbc:SbBS512_E2573 excinuclease ABC subunit B; SMART: DEAD-like helicase ; helicase domain protein; excinuclease ABC subunit B complement(3228379..3230400) Escherichia coli KO11FL 11777831 YP_005278759.1 CDS EKO11_3108 NC_016902.1 3230979 3231656 R TIGRFAM: dethiobiotin synthase; KEGG: ssn:SSON_0757 dithiobiotin synthetase; dethiobiotin synthase complement(3230979..3231656) Escherichia coli KO11FL 11777832 YP_005278760.1 CDS EKO11_3109 NC_016902.1 3231649 3232404 R KEGG: eoh:ECO103_0812 biotin biosynthesis protein BioC; TIGRFAM: biotin biosynthesis protein BioC; PFAM: Methyltransferase type 11; biotin biosynthesis protein BioC complement(3231649..3232404) Escherichia coli KO11FL 11779635 YP_005278761.1 CDS EKO11_3110 NC_016902.1 3232391 3233545 R TIGRFAM: 8-amino-7-oxononanoate synthase; KEGG: eoh:ECO103_0811 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II; 8-amino-7-oxononanoate synthase complement(3232391..3233545) Escherichia coli KO11FL 11777833 YP_005278762.1 CDS EKO11_3111 NC_016902.1 3233542 3234582 R SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: biotin synthase; KEGG: ssn:SSON_0754 biotin synthesis; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; biotin synthase complement(3233542..3234582) Escherichia coli KO11FL 11777834 YP_005278763.1 CDS EKO11_3112 NC_016902.1 3234669 3235958 D KEGG: eok:G2583_1002 adenosylmethionine-8-amino-7-oxononanoate transaminase; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 3234669..3235958 Escherichia coli KO11FL 11777835 YP_005278764.1 CDS EKO11_3113 NC_016902.1 3236017 3236493 D PFAM: PEBP family protein; KEGG: ssn:SSON_0752 putative kinase inhibitor protein; PEBP family protein 3236017..3236493 Escherichia coli KO11FL 11777836 YP_005278765.1 CDS EKO11_3114 NC_016902.1 3236645 3237928 D PFAM: Pectinesterase; KEGG: sbc:SbBS512_E2580 putative pectinesterase; pectinesterase 3236645..3237928 Escherichia coli KO11FL 11777837 YP_005278766.1 CDS EKO11_3115 NC_016902.1 3238162 3240423 R PFAM: aconitate hydratase domain-containing protein; KEGG: eoh:ECO103_0759 hypothetical protein; aconitate hydratase domain-containing protein complement(3238162..3240423) Escherichia coli KO11FL 11779636 YP_005278767.1 CDS EKO11_3116 NC_016902.1 3240606 3242039 R KEGG: eoh:ECO103_0758 putative transporter; TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; anion transporter complement(3240606..3242039) Escherichia coli KO11FL 11777838 YP_005278768.1 CDS EKO11_3117 NC_016902.1 3242115 3243167 R PFAM: protein of unknown function DUF453; KEGG: sfv:SFV_0752 hypothetical protein; hypothetical protein complement(3242115..3243167) Escherichia coli KO11FL 11777839 YP_005278769.1 CDS EKO11_3118 NC_016902.1 3243288 3244304 D KEGG: ssn:SSON_0742 putative transcriptional regulator LysR-type; manually curated; PFAM: LysR substrate-binding; regulatory protein LysR; LysR family transcriptional regulator 3243288..3244304 Escherichia coli KO11FL 11777840 YP_005278770.1 CDS EKO11_3119 NC_016902.1 3244345 3245340 R KEGG: sdy:SDY_2011 6-phosphogluconolactonase; 6-phosphogluconolactonase complement(3244345..3245340) Escherichia coli KO11FL 11777841 YP_005278771.1 CDS EKO11_3120 NC_016902.1 3245495 3246313 D KEGG: eok:G2583_0932 phosphatase YbhA; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; cof family hydrolase 3245495..3246313 Escherichia coli KO11FL 11777842 YP_005278772.1 CDS EKO11_3121 NC_016902.1 3246314 3247372 R TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain-containing protein; KEGG: sbc:SbBS512_E0686 molybdate transporter ATP-binding protein; SMART: AAA ATPase; molybdate ABC transporter ATPase complement(3246314..3247372) Escherichia coli KO11FL 11779637 YP_005278773.1 CDS EKO11_3122 NC_016902.1 3247375 3248064 R KEGG: sdy:SDY_0711 molybdate ABC transporter permease protein; TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; molybdate ABC transporter inner membrane subunit complement(3247375..3248064) Escherichia coli KO11FL 11777843 YP_005278774.1 CDS EKO11_3123 NC_016902.1 3248064 3248837 R KEGG: sdy:SDY_0710 molybdate transporter periplasmic protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; molybdenum ABC transporter periplasmic molybdate-binding protein complement(3248064..3248837) Escherichia coli KO11FL 11777844 YP_005278775.1 CDS EKO11_3125 NC_016902.1 3249282 3250070 D KEGG: sfv:SFV_0579 DNA-binding transcriptional regulator ModE; TIGRFAM: molybdate transport repressor, ModE; PFAM: TOBE domain-containing protein; regulatory protein LysR; ModE family transcriptional regulator 3249282..3250070 Escherichia coli KO11FL 11777846 YP_005278776.1 CDS EKO11_3126 NC_016902.1 3250138 3251610 D KEGG: eoh:ECO103_0748 putative molybdenum transport ATP-binding protein ModF; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3250138..3251610 Escherichia coli KO11FL 11777847 YP_005278777.1 CDS EKO11_3127 NC_016902.1 3251873 3252889 D KEGG: ssn:SSON_0711 UDP-galactose-4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; UDP-glucose 4-epimerase 3251873..3252889 Escherichia coli KO11FL 11779638 YP_005278778.1 CDS EKO11_3128 NC_016902.1 3252899 3253945 D TIGRFAM: galactose-1-phosphate uridylyltransferase; KEGG: eoi:ECO111_0768 galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein; galactose-1-phosphate uridylyltransferase 3252899..3253945 Escherichia coli KO11FL 11777848 YP_005278779.1 CDS EKO11_3129 NC_016902.1 3253949 3255097 D KEGG: ebr:ECB_00710 galactokinase; TIGRFAM: galactokinase; PFAM: Galactokinase galactose-binding domain; GHMP kinase; GHMP kinase domain protein; galactokinase 3253949..3255097 Escherichia coli KO11FL 11777849 YP_005278780.1 CDS EKO11_3130 NC_016902.1 3255091 3256131 D TIGRFAM: galactose mutarotase; KEGG: sbc:SbBS512_E0677 aldose 1-epimerase; PFAM: Aldose 1-epimerase; galactose mutarotase 3255091..3256131 Escherichia coli KO11FL 11779639 YP_005278781.1 CDS EKO11_3131 NC_016902.1 3256336 3257088 D TIGRFAM: phosphoglycerate mutase 1 family; KEGG: sbc:SbBS512_E0676 phosphoglyceromutase; PFAM: Phosphoglycerate mutase; phosphoglycerate mutase 3256336..3257088 Escherichia coli KO11FL 11779640 YP_005278782.1 CDS EKO11_3132 NC_016902.1 3257246 3258298 R TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: sdy:SDY_0701 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; phospho-2-dehydro-3-deoxyheptonate aldolase complement(3257246..3258298) Escherichia coli KO11FL 11777850 YP_005278783.1 CDS EKO11_3133 NC_016902.1 3258614 3258994 D KEGG: sfv:SFV_0587 putative homeobox protein; putative homeobox protein 3258614..3258994 Escherichia coli KO11FL 11777851 YP_005278784.1 CDS EKO11_3134 NC_016902.1 3259108 3260049 D KEGG: sdy:SDY_0696 zinc transporter ZitB; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; cation diffusion facilitator family transporter 3259108..3260049 Escherichia coli KO11FL 11777852 YP_005278785.1 CDS EKO11_3135 NC_016902.1 3260046 3260765 R KEGG: ssn:SSON_0703 required for NMN transport; TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; nicotinamide mononucleotide transporter PnuC complement(3260046..3260765) Escherichia coli KO11FL 11777853 YP_005278786.1 CDS EKO11_3136 NC_016902.1 3260803 3261846 R TIGRFAM: quinolinate synthetase complex, A subunit; KEGG: eoh:ECO103_0738 quinolinate synthetase; PFAM: Quinolinate synthetase A; quinolinate synthetase complex subunit A complement(3260803..3261846) Escherichia coli KO11FL 11777854 YP_005278787.1 CDS EKO11_3137 NC_016902.1 3263415 3264206 R TIGRFAM: tol-pal system protein YbgF; KEGG: sbc:SbBS512_E0664 tol-pal system protein YbgF; tol-pal system protein YbgF complement(3263415..3264206) Escherichia coli KO11FL 11777862 YP_005278788.1 CDS EKO11_3138 NC_016902.1 3264216 3264737 R KEGG: sbc:SbBS512_E0663 peptidoglycan-associated outer membrane lipoprotein; TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein; peptidoglycan-associated lipoprotein complement(3264216..3264737) Escherichia coli KO11FL 11777863 YP_005278789.1 CDS EKO11_3139 NC_016902.1 3264772 3266064 R KEGG: ssn:SSON_0692 translocation protein TolB; TIGRFAM: Tol-Pal system beta propeller repeat protein TolB; PFAM: TolB domain-containing protein; WD40-like beta Propeller containing protein; Tol-Pal system beta propeller repeat-containing protein TolB complement(3264772..3266064) Escherichia coli KO11FL 11777864 YP_005278790.1 CDS EKO11_3140 NC_016902.1 3266197 3267462 R KEGG: ebd:ECBD_2921 cell envelope integrity inner membrane protein TolA; TIGRFAM: protein TolA; PFAM: Tol-Pal system TolA; protein TolA complement(3266197..3267462) Escherichia coli KO11FL 11777865 YP_005278791.1 CDS EKO11_3141 NC_016902.1 3267527 3267955 R KEGG: eok:G2583_0905 hypothetical protein; TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR; protein TolR complement(3267527..3267955) Escherichia coli KO11FL 11777866 YP_005278792.1 CDS EKO11_3142 NC_016902.1 3267959 3268651 R KEGG: eok:G2583_0904 inner membrane protein; TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel; protein TolQ complement(3267959..3268651) Escherichia coli KO11FL 11777867 YP_005278793.1 CDS EKO11_3143 NC_016902.1 3268648 3269052 R KEGG: sbo:SBO_0595 acyl-CoA thioester hydrolase YbgC; TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein; tol-pal system-associated acyl-CoA thioesterase complement(3268648..3269052) Escherichia coli KO11FL 11779641 YP_005278794.1 CDS EKO11_3144 NC_016902.1 3269202 3269495 R KEGG: sdy:SDY_0683 hypothetical protein; TIGRFAM: cyd operon protein YbgE; PFAM: Cyd operon protein YbgE; cyd operon protein YbgE complement(3269202..3269495) Escherichia coli KO11FL 11779642 YP_005278795.1 CDS EKO11_3145 NC_016902.1 3269495 3269608 R KEGG: sdy:SDY_0682 putative outer membrane lipoprotein; TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein; cyd operon protein YbgT complement(3269495..3269608) Escherichia coli KO11FL 11777868 YP_005278796.1 CDS EKO11_3146 NC_016902.1 3269623 3270762 R KEGG: sbc:SbBS512_E0655 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; cytochrome d ubiquinol oxidase, subunit II complement(3269623..3270762) Escherichia coli KO11FL 11777869 YP_005278797.1 CDS EKO11_3147 NC_016902.1 3270778 3272346 R PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: sbc:SbBS512_E0654 cytochrome d ubiquinol oxidase, subunit I; cytochrome bd ubiquinol oxidase subunit I complement(3270778..3272346) Escherichia coli KO11FL 11777870 YP_005278798.1 CDS EKO11_3148 NC_016902.1 3273193 3275826 R PFAM: glycoside hydrolase family 38; glycosyl hydrolase 38 domain protein; KEGG: eoh:ECO103_0726 alpha-mannosidase; glycoside hydrolase family protein complement(3273193..3275826) Escherichia coli KO11FL 11777871 YP_005278799.1 CDS EKO11_3149 NC_016902.1 3275844 3277760 R KEGG: ebd:ECBD_2930 PTS system 2-O-A-mannosyl-D-glycerate specific transporter subunit IIABC; TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphotransferase system EIIC; PTS system fructose subfamily transporter subunit IIC complement(3275844..3277760) Escherichia coli KO11FL 11777872 YP_005278800.1 CDS EKO11_3150 NC_016902.1 3277929 3278651 D KEGG: sbo:SBO_0588 DNA-binding transcriptional repressor MngR; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 3277929..3278651 Escherichia coli KO11FL 11777873 YP_005278801.1 CDS EKO11_3151 NC_016902.1 3278755 3279624 R TIGRFAM: succinyl-CoA synthetase, alpha subunit; KEGG: sbc:SbBS512_E0648 succinyl-CoA synthetase subunit alpha; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding domain protein; succinyl-CoA synthetase subunit alpha complement(3278755..3279624) Escherichia coli KO11FL 11777874 YP_005278802.1 CDS EKO11_3152 NC_016902.1 3279624 3280790 R TIGRFAM: succinyl-CoA synthetase, beta subunit; KEGG: ssn:SSON_0679 succinyl-CoA synthetase subunit beta; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase; succinyl-CoA synthetase subunit beta complement(3279624..3280790) Escherichia coli KO11FL 11777875 YP_005278803.1 CDS EKO11_3153 NC_016902.1 3280884 3282101 R KEGG: eoh:ECO103_0720 dihydrolipoamide succinyltransferase; TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase complement(3280884..3282101) Escherichia coli KO11FL 11777876 YP_005278804.1 CDS EKO11_3154 NC_016902.1 3282116 3284917 R TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; KEGG: sbc:SbBS512_E0645 2-oxoglutarate dehydrogenase E1 component; PFAM: Transketolase central region; dehydrogenase E1 component; 2-oxoglutarate dehydrogenase, E1 subunit complement(3282116..3284917) Escherichia coli KO11FL 11777877 YP_005278805.1 CDS EKO11_3155 NC_016902.1 3285118 3285834 R KEGG: sbc:SbBS512_E0643 succinate dehydrogenase iron-sulfur subunit; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; succinate dehydrogenase and fumarate reductase iron-sulfur protein complement(3285118..3285834) Escherichia coli KO11FL 11777878 YP_005278806.1 CDS EKO11_3156 NC_016902.1 3285850 3287616 R KEGG: sbo:SBO_0581 succinate dehydrogenase flavoprotein subunit; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; succinate dehydrogenase, flavoprotein subunit complement(3285850..3287616) Escherichia coli KO11FL 11777879 YP_005278807.1 CDS EKO11_3157 NC_016902.1 3287616 3287963 R TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; KEGG: sdy:SDY_0660 succinate dehydrogenase cytochrome b556 small membrane subunit; succinate dehydrogenase, hydrophobic membrane anchor protein complement(3287616..3287963) Escherichia coli KO11FL 11779643 YP_005278808.1 CDS EKO11_3158 NC_016902.1 3287957 3288361 R KEGG: sbc:SbBS512_E0640 succinate dehydrogenase cytochrome b556 large membrane subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; succinate dehydrogenase, cytochrome b556 subunit complement(3287957..3288361) Escherichia coli KO11FL 11777880 YP_005278809.1 CDS EKO11_3159 NC_016902.1 3289055 3290338 D KEGG: sbc:SbBS512_E0638 type II citrate synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase; citrate synthase I 3289055..3290338 Escherichia coli KO11FL 11779644 YP_005278810.1 CDS EKO11_3160 NC_016902.1 3290729 3291295 D PFAM: Fimbrial protein domain-containing protein; KEGG: ssn:SSON_0670 putative fimbrial-like protein; fimbrial protein domain-containing protein 3290729..3291295 Escherichia coli KO11FL 11779645 YP_005278811.1 CDS EKO11_3161 NC_016902.1 3291355 3293805 D PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: eoi:ECO111_0735 putative outer membrane usher protein; fimbrial biogenesis outer membrane usher protein 3291355..3293805 Escherichia coli KO11FL 11777881 YP_005278812.1 CDS EKO11_3162 NC_016902.1 3293820 3294551 D PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: sbc:SbBS512_E0634 periplasmic pilus chaperone family protein; Pili assembly chaperone, N-terminal protein 3293820..3294551 Escherichia coli KO11FL 11777882 YP_005278813.1 CDS EKO11_3163 NC_016902.1 3294548 3295609 D KEGG: ssn:SSON_0667 hypothetical protein; hypothetical protein 3294548..3295609 Escherichia coli KO11FL 11777883 YP_005278814.1 CDS EKO11_3164 NC_016902.1 3295761 3296807 D KEGG: ebw:BWG_0574 putative regulator; TIGRFAM: membrane protein AbrB duplication; PFAM: ammonia monooxygenase; membrane protein AbrB 3295761..3296807 Escherichia coli KO11FL 11777884 YP_005278815.1 CDS EKO11_3165 NC_016902.1 3296804 3297595 R PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; Formamidopyrimidine-DNA glycosylase catalytic domain protein; KEGG: eok:G2583_0869 endonuclease VIII (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyase Nei); DNA glycosylase/AP lyase complement(3296804..3297595) Escherichia coli KO11FL 11777885 YP_005278816.1 CDS EKO11_3166 NC_016902.1 3297631 3298365 R PFAM: LamB/YcsF family protein; KEGG: sbo:SBO_0572 LamB/YcsF family protein; LamB/YcsF family protein complement(3297631..3298365) Escherichia coli KO11FL 11777886 YP_005278817.1 CDS EKO11_3167 NC_016902.1 3298355 3299287 R SMART: Allophanate hydrolase subunit 2; TIGRFAM: urea amidolyase related protein; KEGG: sbc:SbBS512_E0629 allophanate hydrolase, subunit 2; PFAM: Allophanate hydrolase subunit 2; urea amidolyase-like protein complement(3298355..3299287) Escherichia coli KO11FL 11777887 YP_005278818.1 CDS EKO11_3168 NC_016902.1 3299281 3299937 R KEGG: ebd:ECBD_2950 allophanate hydrolase subunit 1; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; allophanate hydrolase subunit 1 complement(3299281..3299937) Escherichia coli KO11FL 11777888 YP_005278819.1 CDS EKO11_3169 NC_016902.1 3299960 3300703 R PFAM: protein of unknown function DUF34; KEGG: sbc:SbBS512_E0627 putative hydrolase-oxidase; hypothetical protein complement(3299960..3300703) Escherichia coli KO11FL 11777889 YP_005278820.1 CDS EKO11_3170 NC_016902.1 3300974 3302455 D KEGG: sfx:S0601 putative transport protein; TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; amino acid/peptide transporter 3300974..3302455 Escherichia coli KO11FL 11777890 YP_005278821.1 CDS EKO11_3171 NC_016902.1 3302497 3303915 R KEGG: ebd:ECBD_2953 deoxyribodipyrimidine photolyase; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; deoxyribodipyrimidine photo-lyase complement(3302497..3303915) Escherichia coli KO11FL 11777891 YP_005278822.1 CDS EKO11_3172 NC_016902.1 3303912 3304421 R PFAM: protein of unknown function DUF1722; KEGG: ebd:ECBD_2954 hypothetical protein; hypothetical protein complement(3303912..3304421) Escherichia coli KO11FL 11777892 YP_005278823.1 CDS EKO11_3175 NC_016902.1 3305936 3306505 R KEGG: eoj:ECO26_0766 hypothetical protein; hypothetical protein complement(3305936..3306505) Escherichia coli KO11FL 11777895 YP_005278824.1 CDS EKO11_3176 NC_016902.1 3306502 3307935 R PFAM: RHS protein; YD repeat-containing protein; KEGG: ebr:ECB_00660 conserved hypothetical protein, rhs-like protein; RHS protein complement(3306502..3307935) Escherichia coli KO11FL 11777896 YP_005278825.1 CDS EKO11_3177 NC_016902.1 3308053 3308379 R KEGG: ebd:ECBD_2959 hypothetical protein; hypothetical protein complement(3308053..3308379) Escherichia coli KO11FL 11777897 YP_005278826.1 CDS EKO11_3178 NC_016902.1 3308379 3312572 R KEGG: eoj:ECO26_0763 RhsC core protein with extension; TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein; YD repeat protein complement(3308379..3312572) Escherichia coli KO11FL 11777898 YP_005278827.1 CDS EKO11_3179 NC_016902.1 3312815 3313021 R PFAM: Protein of unknown function DUF2517; KEGG: sdy:SDY_0635 hypothetical protein; hypothetical protein complement(3312815..3313021) Escherichia coli KO11FL 11779646 YP_005278828.1 CDS EKO11_3180 NC_016902.1 3313220 3313423 D manually curated; TIGRFAM: K+-transporting ATPase, F subunit; KEGG: sbc:SbBS512_E0550 K+-transporting ATPase, F subunit; PFAM: K+transporting ATPase F subunit; K+-transporting ATPase subunit F 3313220..3313423 Escherichia coli KO11FL 11779647 YP_005278829.1 CDS EKO11_3181 NC_016902.1 3313423 3315096 D TIGRFAM: potassium-transporting ATPase, A subunit; KEGG: ebd:ECBD_2962 potassium-transporting ATPase subunit A; PFAM: K transporting ATPase A subunit; potassium-transporting ATPase subunit A 3313423..3315096 Escherichia coli KO11FL 11777899 YP_005278830.1 CDS EKO11_3182 NC_016902.1 3315119 3317167 D KEGG: eoh:ECO103_0691 potassium-transporting ATPase subunit B; TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; K+-transporting ATPase subunit B 3315119..3317167 Escherichia coli KO11FL 11777900 YP_005278831.1 CDS EKO11_3183 NC_016902.1 3317176 3317748 D TIGRFAM: potassium-transporting ATPase, C subunit; KEGG: ebd:ECBD_2964 potassium-transporting ATPase subunit C; PFAM: K transporting ATPase KdpC subunit; potassium-transporting ATPase subunit C 3317176..3317748 Escherichia coli KO11FL 11777901 YP_005278832.1 CDS EKO11_3184 NC_016902.1 3317741 3320425 D KEGG: eoh:ECO103_0689 sensor protein KdpD; PFAM: Osmosensitive K channel His kinase sensor; UspA domain-containing protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; osmosensitive K channel His kinase sensor 3317741..3320425 Escherichia coli KO11FL 11777902 YP_005278833.1 CDS EKO11_3185 NC_016902.1 3320422 3321099 D KEGG: eoh:ECO103_0688 DNA-binding transcriptional activator KdpE; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; two component transcriptional regulator, winged helix family 3320422..3321099 Escherichia coli KO11FL 11777903 YP_005278834.1 CDS EKO11_3186 NC_016902.1 3321374 3321478 D KEGG: etr:ETAE_0258 hypothetical protein; hypothetical protein 3321374..3321478 Escherichia coli KO11FL 11777904 YP_005278835.1 CDS EKO11_3187 NC_016902.1 3321789 3323987 D KEGG: eoh:ECO103_0687 ornithine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; Ornithine decarboxylase 3321789..3323987 Escherichia coli KO11FL 11777905 YP_005278836.1 CDS EKO11_3188 NC_016902.1 3323984 3325303 D KEGG: ssn:SSON_0643 putrescine transporter; TIGRFAM: arginine/ornithine antiporter; PFAM: amino acid permease-associated region; arginine/ornithine antiporter 3323984..3325303 Escherichia coli KO11FL 11777906 YP_005278837.1 CDS EKO11_3189 NC_016902.1 3325359 3326999 R KEGG: efe:EFER_2420 phosphoglucomutase; TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucomutase, alpha-D-glucose phosphate-specific complement(3325359..3326999) Escherichia coli KO11FL 11777907 YP_005278838.1 CDS EKO11_3190 NC_016902.1 3327025 3327570 R PFAM: SeqA family protein; KEGG: eoh:ECO103_0684 replication initiation regulator SeqA; SeqA family protein complement(3327025..3327570) Escherichia coli KO11FL 11777908 YP_005278839.1 CDS EKO11_3191 NC_016902.1 3327755 3328519 D PFAM: alpha/beta hydrolase fold; KEGG: sbo:SBO_0548 hypothetical protein; alpha/beta hydrolase fold protein 3327755..3328519 Escherichia coli KO11FL 11777909 YP_005278840.1 CDS EKO11_3192 NC_016902.1 3328590 3328952 D KEGG: sdy:SDY_0625 LexA regulated protein; LexA regulated protein 3328590..3328952 Escherichia coli KO11FL 11777910 YP_005278841.1 CDS EKO11_3193 NC_016902.1 3329092 3329622 D KEGG: sdy:SDY_0624 flavodoxin FldA; TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase; flavodoxin 3329092..3329622 Escherichia coli KO11FL 11777911 YP_005278842.1 CDS EKO11_3194 NC_016902.1 3329911 3330357 D PFAM: ferric-uptake regulator; KEGG: sdy:SDY_0623 ferric uptake regulator; ferric uptake regulator family protein 3329911..3330357 Escherichia coli KO11FL 11777912 YP_005278843.1 CDS EKO11_3195 NC_016902.1 3330441 3330767 R KEGG: eoh:ECO103_0678 putative lipoprotein; putative lipoprotein complement(3330441..3330767) Escherichia coli KO11FL 11777913 YP_005278844.1 CDS EKO11_3196 NC_016902.1 3330817 3332223 R PFAM: outer membrane porin; KEGG: ebd:ECBD_2980 outer membrane porin; outer membrane porin complement(3330817..3332223) Escherichia coli KO11FL 11777914 YP_005278845.1 CDS EKO11_3197 NC_016902.1 3332669 3334333 R KEGG: ssn:SSON_0634 glutaminyl-tRNA synthetase; TIGRFAM: glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain; glutaminyl-tRNA synthetase complement(3332669..3334333) Escherichia coli KO11FL 11777915 YP_005278846.1 CDS EKO11_3198 NC_016902.1 3334535 3336481 R TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, maltose and glucose-specific subfamily, IIC subunit; PTS system, glucose-like IIB subunint; PTS system, glucose subfamily, IIA subunit; KEGG: eoi:ECO111_0698 PTS system N-acetyl glucosamine specific transporter subunits IIABC; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; sugar-specific permease EIIA 1 domain; PTS system N-acetylglucosamine-specific transporter subunit IIBC complement(3334535..3336481) Escherichia coli KO11FL 11777916 YP_005278847.1 CDS EKO11_3199 NC_016902.1 3336814 3337614 D KEGG: sbc:SbBS512_E0573 glucosamine-6-phosphate deaminase; TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; glucosamine-6-phosphate isomerase 3336814..3337614 Escherichia coli KO11FL 11779648 YP_005278848.1 CDS EKO11_3200 NC_016902.1 3337673 3338821 D TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: eok:G2583_0838 N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase; N-acetylglucosamine-6-phosphate deacetylase 3337673..3338821 Escherichia coli KO11FL 11779649 YP_005278849.1 CDS EKO11_3201 NC_016902.1 3338830 3340050 D PFAM: ROK family protein; regulatory protein MarR; KEGG: sdy:SDY_0610 transcriptional repressor of N-acetylglucosamine operon; ROK family protein 3338830..3340050 Escherichia coli KO11FL 11777917 YP_005278850.1 CDS EKO11_3202 NC_016902.1 3340098 3340850 D KEGG: sdy:SDY_0609 UMP phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase 3340098..3340850 Escherichia coli KO11FL 11777918 YP_005278851.1 CDS EKO11_3203 NC_016902.1 3341107 3342771 D KEGG: sfv:SFV_0657 asparagine synthetase B; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase; asparagine synthase 3341107..3342771 Escherichia coli KO11FL 11777919 YP_005278852.1 CDS EKO11_3204 NC_016902.1 3344009 3345184 R KEGG: eoh:ECO103_0669 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: FAD dependent oxidoreductase; UbiH/UbiF/VisC/COQ6 family Ubiquinone biosynthesis hydroxylase complement(3344009..3345184) Escherichia coli KO11FL 11777926 YP_005278853.1 CDS EKO11_3205 NC_016902.1 3345330 3346754 D TIGRFAM: tRNA-i(6)A37 thiotransferase enzyme MiaB; RNA modification enzyme, MiaB family; PFAM: protein of unknown function UPF0004 ; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; KEGG: sdy:SDY_0597 hypothetical protein; SMART: Elongator protein 3/MiaB/NifB; tRNA-i(6)A37 thiotransferase enzyme MiaB 3345330..3346754 Escherichia coli KO11FL 11777927 YP_005278854.1 CDS EKO11_3206 NC_016902.1 3346868 3347947 D PFAM: PhoH family protein; KEGG: sdy:SDY_0596 putative ATP-binding protein in pho regulon; PhoH family protein 3346868..3347947 Escherichia coli KO11FL 11777928 YP_005278855.1 CDS EKO11_3207 NC_016902.1 3347944 3348411 D PFAM: protein of unknown function UPF0054; KEGG: sbo:SBO_0523 putative metalloprotease; hypothetical protein 3347944..3348411 Escherichia coli KO11FL 11777929 YP_005278856.1 CDS EKO11_3208 NC_016902.1 3348501 3349379 D PFAM: transporter-associated region; CBS domain containing protein; KEGG: sdy:SDY_0594 putative transport protein; transporter-associated protein 3348501..3349379 Escherichia coli KO11FL 11777930 YP_005278857.1 CDS EKO11_3209 NC_016902.1 3349404 3350942 D KEGG: eoh:ECO103_0664 apolipoprotein N-acyltransferase; TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase 3349404..3350942 Escherichia coli KO11FL 11779651 YP_005278858.1 CDS EKO11_3211 NC_016902.1 3353351 3354259 D KEGG: sdy:SDY_0592 glutamate and aspartate transporter subunit; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; family 3 extracellular solute-binding protein 3353351..3354259 Escherichia coli KO11FL 11777932 YP_005278859.1 CDS EKO11_3212 NC_016902.1 3354429 3355169 D KEGG: ssn:SSON_0608 glutamate/aspartate transport system permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 3354429..3355169 Escherichia coli KO11FL 11777933 YP_005278860.1 CDS EKO11_3213 NC_016902.1 3355169 3355843 D KEGG: sdy:SDY_0588 glutamate/aspartate transport system permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; polar amino acid ABC transporter inner membrane subunit 3355169..3355843 Escherichia coli KO11FL 11779652 YP_005278861.1 CDS EKO11_3214 NC_016902.1 3355843 3356568 D KEGG: ssn:SSON_0606 ATP-binding protein of glutamate/aspartate transport system; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3355843..3356568 Escherichia coli KO11FL 11777934 YP_005278862.1 CDS EKO11_3215 NC_016902.1 3356686 3357621 D KEGG: ssn:SSON_0605 ribonucleoside hydrolase 1; PFAM: Inosine/uridine-preferring nucleoside hydrolase; ribosylpyrimidine nucleosidase 3356686..3357621 Escherichia coli KO11FL 11777935 YP_005278863.1 CDS EKO11_3216 NC_016902.1 3357705 3359375 D PFAM: Heat shock protein 70; KEGG: sfv:SFV_0676 putative DnaK protein; Heat shock protein 70 3357705..3359375 Escherichia coli KO11FL 11779653 YP_005278864.1 CDS EKO11_3217 NC_016902.1 3359435 3360886 R PFAM: heat shock protein DnaJ domain protein; KEGG: eoh:ECO103_0656 Hsc56 co-chaperone of HscC; heat shock protein DnaJ domain-containing protein complement(3359435..3360886) Escherichia coli KO11FL 11777936 YP_005278865.1 CDS EKO11_3218 NC_016902.1 3360883 3361590 R KEGG: eoh:ECO103_0655 putative tRNA ligase; putative tRNA ligase complement(3360883..3361590) Escherichia coli KO11FL 11777937 YP_005278866.1 CDS EKO11_3219 NC_016902.1 3361691 3362245 D KEGG: eoh:ECO103_0654 hypothetical protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein repeat-containing protein 3361691..3362245 Escherichia coli KO11FL 11777938 YP_005278867.1 CDS EKO11_3220 NC_016902.1 3362255 3363682 R KEGG: ssn:SSON_0600 putative enzyme of polynucleotide modification; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; heat shock protein DnaJ domain-containing protein complement(3362255..3363682) Escherichia coli KO11FL 11777939 YP_005278868.1 CDS EKO11_3221 NC_016902.1 3363679 3364386 R KEGG: ebw:BWG_0516 hypothetical protein; hypothetical protein complement(3363679..3364386) Escherichia coli KO11FL 11777940 YP_005278869.1 CDS EKO11_3222 NC_016902.1 3364550 3365527 D KEGG: sbo:SBO_0508 hypothetical protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; Sel1 domain-containing protein repeat-containing protein 3364550..3365527 Escherichia coli KO11FL 11779654 YP_005278870.1 CDS EKO11_3223 NC_016902.1 3365597 3366079 R PFAM: protein of unknown function DUF1451; KEGG: sdy:SDY_0567 hypothetical protein; hypothetical protein complement(3365597..3366079) Escherichia coli KO11FL 11777941 YP_005278871.1 CDS EKO11_3224 NC_016902.1 3366314 3368896 D KEGG: efe:EFER_2464 leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase; leucyl-tRNA synthetase 3366314..3368896 Escherichia coli KO11FL 11777942 YP_005278872.1 CDS EKO11_3225 NC_016902.1 3368911 3369492 D PFAM: Rare lipoprotein B; KEGG: sbc:SbBS512_E0610 LPS-assembly lipoprotein RlpB; Rare lipoprotein B 3368911..3369492 Escherichia coli KO11FL 11777943 YP_005278873.1 CDS EKO11_3226 NC_016902.1 3369492 3370523 D TIGRFAM: DNA polymerase III, delta subunit; KEGG: eok:G2583_0803 DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; DNA polymerase III subunit delta 3369492..3370523 Escherichia coli KO11FL 11779655 YP_005278874.1 CDS EKO11_3227 NC_016902.1 3370525 3371166 D TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; KEGG: ssn:SSON_0593 nicotinic acid mononucleotide adenylyltransferase; PFAM: cytidylyltransferase; nicotinate (nicotinamide) nucleotide adenylyltransferase 3370525..3371166 Escherichia coli KO11FL 11777944 YP_005278875.1 CDS EKO11_3228 NC_016902.1 3371190 3371801 D KEGG: eoh:ECO103_0645 putative alpha-ribazole-5'-P phosphatase; TIGRFAM: alpha-ribazole phosphatase; PFAM: Phosphoglycerate mutase; alpha-ribazole phosphatase 3371190..3371801 Escherichia coli KO11FL 11777945 YP_005278876.1 CDS EKO11_3229 NC_016902.1 3372061 3372378 D KEGG: sbc:SbBS512_E0614 hypothetical protein; TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; iojap family protein 3372061..3372378 Escherichia coli KO11FL 11777946 YP_005278877.1 CDS EKO11_3230 NC_016902.1 3372382 3372849 D PFAM: protein of unknown function DUF163; KEGG: sdy:SDY_0558 rRNA large subunit methyltransferase; hypothetical protein 3372382..3372849 Escherichia coli KO11FL 11777947 YP_005278878.1 CDS EKO11_3231 NC_016902.1 3372880 3374781 D TIGRFAM: penicillin-binding protein 2; KEGG: ebd:ECBD_3016 penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; penicillin-binding protein 2 3372880..3374781 Escherichia coli KO11FL 11777948 YP_005278879.1 CDS EKO11_3232 NC_016902.1 3374784 3375896 D KEGG: sbc:SbBS512_E0617 cell wall shape-determining protein; TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; rod shape-determining protein RodA 3374784..3375896 Escherichia coli KO11FL 11777949 YP_005278880.1 CDS EKO11_3233 NC_016902.1 3375907 3376995 D KEGG: eoi:ECO111_0663 rare lipoprotein A; TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain-containing protein; rare lipoprotein A 3375907..3376995 Escherichia coli KO11FL 11779656 YP_005278881.1 CDS EKO11_3234 NC_016902.1 3377135 3378346 D KEGG: sdy:SDY_0554 D-alanyl-D-alanine carboxypeptidase fraction A; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; Beta-lactamase 3377135..3378346 Escherichia coli KO11FL 11777950 YP_005278882.1 CDS EKO11_3235 NC_016902.1 3378457 3378720 D PFAM: protein of unknown function DUF493; KEGG: sdy:SDY_0553 hypothetical protein; hypothetical protein 3378457..3378720 Escherichia coli KO11FL 11777951 YP_005278883.1 CDS EKO11_3236 NC_016902.1 3378821 3379462 D TIGRFAM: lipoate-protein ligase B; KEGG: sdy:SDY_0552 lipoyltransferase; PFAM: biotin/lipoate A/B protein ligase; lipoate-protein ligase B 3378821..3379462 Escherichia coli KO11FL 11777952 YP_005278884.1 CDS EKO11_3237 NC_016902.1 3379721 3380674 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: eoi:ECO111_0659 putative DNA-binding transcriptional regulator; LysR family transcriptional regulator 3379721..3380674 Escherichia coli KO11FL 11777953 YP_005278885.1 CDS EKO11_3238 NC_016902.1 3380883 3381848 D SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: lipoic acid synthetase; KEGG: sdy:SDY_0550 lipoyl synthase; PFAM: Radical SAM domain protein; lipoic acid synthetase 3380883..3381848 Escherichia coli KO11FL 11777954 YP_005278886.1 CDS EKO11_3239 NC_016902.1 3381949 3382152 R KEGG: sdy:SDY_0549 twin arginine translocase protein E; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; twin-arginine translocation protein, TatA/E family subunit complement(3381949..3382152) Escherichia coli KO11FL 11777955 YP_005278887.1 CDS EKO11_3240 NC_016902.1 3382281 3383069 R PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ebd:ECBD_3025 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(3382281..3383069) Escherichia coli KO11FL 11777956 YP_005278888.1 CDS EKO11_3241 NC_016902.1 3383162 3383545 D KEGG: sdy:SDY_0547 hypothetical protein; TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; CrcB protein 3383162..3383545 Escherichia coli KO11FL 11777957 YP_005278889.1 CDS EKO11_3242 NC_016902.1 3383599 3383808 R KEGG: cko:CKO_02534 cold shock protein CspE; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; cold-shock protein complement(3383599..3383808) Escherichia coli KO11FL 11777958 YP_005278890.1 CDS EKO11_3243 NC_016902.1 3383983 3384543 R PFAM: Antimicrobial peptide resistance and lipid A acylation PagP; KEGG: ebd:ECBD_3028 palmitoyl transferase; antimicrobial peptide resistance and lipid A acylation PagP complement(3383983..3384543) Escherichia coli KO11FL 11777959 YP_005278891.1 CDS EKO11_3244 NC_016902.1 3385131 3386516 D KEGG: sbo:SBO_0486 C4-dicarboxylate transporter DcuC; TIGRFAM: anaerobic c4-dicarboxylate antiporter, DcuC family; PFAM: C4-dicarboxylate anaerobic carrier-like; anaerobic c4-dicarboxylate antiporter 3385131..3386516 Escherichia coli KO11FL 11777960 YP_005278892.1 CDS EKO11_3245 NC_016902.1 3386557 3387237 R KEGG: sbc:SbBS512_E0535 two-component response regulator DpiA; PFAM: response regulator receiver; SMART: response regulator receiver; fused response regulator receiver/hypothetical protein complement(3386557..3387237) Escherichia coli KO11FL 11777961 YP_005278893.1 CDS EKO11_3246 NC_016902.1 3387206 3388864 R KEGG: eok:G2583_0783 sensor histidine kinase DpiB; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; signal transduction histidine kinase regulating citrate/malate metabolism complement(3387206..3388864) Escherichia coli KO11FL 11777962 YP_005278894.1 CDS EKO11_3247 NC_016902.1 3389244 3390302 D SMART: Citrate lyase ligase domain protein; TIGRFAM: citrate lyase ligase; cytidyltransferase-related domain protein; KEGG: eoi:ECO111_0649 citrate lyase synthetase; PFAM: Citrate lyase ligase domain protein; GCN5-related N-acetyltransferase; citrate lyase ligase 3389244..3390302 Escherichia coli KO11FL 11777963 YP_005278895.1 CDS EKO11_3248 NC_016902.1 3390317 3390613 D TIGRFAM: citrate lyase acyl carrier protein; KEGG: ssn:SSON_0569 citrate lyase subunit gamma; citrate lyase acyl carrier protein 3390317..3390613 Escherichia coli KO11FL 11777964 YP_005278896.1 CDS EKO11_3249 NC_016902.1 3390610 3391518 D TIGRFAM: citrate lyase, beta subunit; KEGG: sbc:SbBS512_E0530 citrate (pro-3S)-lyase, beta subunit; PFAM: HpcH/HpaI aldolase; citrate lyase subunit beta 3390610..3391518 Escherichia coli KO11FL 11777965 YP_005278897.1 CDS EKO11_3250 NC_016902.1 3391529 3393061 D TIGRFAM: citrate lyase, alpha subunit; KEGG: ebd:ECBD_3037 citrate lyase, alpha subunit; PFAM: Citrate lyase alpha subunit; citrate lyase subunit alpha 3391529..3393061 Escherichia coli KO11FL 11777966 YP_005278898.1 CDS EKO11_3251 NC_016902.1 3393065 3393616 D TIGRFAM: holo-ACP synthase CitX; KEGG: sbc:SbBS512_E0528 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA:apo-citrate lyase; PFAM: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase; holo-ACP synthase CitX 3393065..3393616 Escherichia coli KO11FL 11777967 YP_005278899.1 CDS EKO11_3252 NC_016902.1 3393591 3394469 D TIGRFAM: triphosphoribosyl-dephospho-CoA synthase CitG; KEGG: ebd:ECBD_3039 triphosphoribosyl-dephospho-CoA synthase; PFAM: triphosphoribosyl-dephospho-CoA protein; triphosphoribosyl-dephospho-CoA synthase CitG 3393591..3394469 Escherichia coli KO11FL 11779657 YP_005278900.1 CDS EKO11_3253 NC_016902.1 3394520 3395983 D KEGG: ebd:ECBD_3040 anion transporter; TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; anion transporter 3394520..3395983 Escherichia coli KO11FL 11777968 YP_005278901.1 CDS EKO11_3254 NC_016902.1 3396097 3396903 D KEGG: eok:G2583_0775 ribonuclease I; PFAM: ribonuclease T2; ribonuclease 3396097..3396903 Escherichia coli KO11FL 11777969 YP_005278902.1 CDS EKO11_3255 NC_016902.1 3397133 3397543 D KEGG: sbc:SbBS512_E0524 nucleoside diphosphate kinase regulator; GreA/GreB family elongation factor 3397133..3397543 Escherichia coli KO11FL 11777970 YP_005278903.1 CDS EKO11_3256 NC_016902.1 3397774 3399012 R PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: eok:G2583_0772 oxidoreductase, zinc-binding dehydrogenase family; alcohol dehydrogenase GroES domain-containing protein complement(3397774..3399012) Escherichia coli KO11FL 11777971 YP_005278904.1 CDS EKO11_3257 NC_016902.1 3399233 3399661 D PFAM: UspA domain-containing protein; KEGG: sdy:SDY_0542 hypothetical protein; UspA domain-containing protein 3399233..3399661 Escherichia coli KO11FL 11777972 YP_005278905.1 CDS EKO11_3258 NC_016902.1 3399782 3401377 R KEGG: sbc:SbBS512_E0520 alkyl hydroperoxide reductase subunit F; TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; alkyl hydroperoxide reductase complement(3399782..3401377) Escherichia coli KO11FL 11777973 YP_005278906.1 CDS EKO11_3259 NC_016902.1 3401518 3402081 R KEGG: sbc:SbBS512_E0519 alkyl hydroperoxide reductase subunit C; TIGRFAM: peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like; peroxiredoxin complement(3401518..3402081) Escherichia coli KO11FL 11777974 YP_005278907.1 CDS EKO11_3260 NC_016902.1 3402453 3403199 D manually curated; KEGG: ebw:BWG_0478 disulfide isomerase/thiol-disulfide oxidase; disulfide isomerase/thiol-disulfide oxidase 3402453..3403199 Escherichia coli KO11FL 11777975 YP_005278908.1 CDS EKO11_3261 NC_016902.1 3403408 3404310 D PFAM: regulatory protein LysR; KEGG: ebw:BWG_0477 putative DNA-binding transcriptional regulator; LysR family transcriptional regulator 3403408..3404310 Escherichia coli KO11FL 11777976 YP_005278909.1 CDS EKO11_3262 NC_016902.1 3404457 3405677 D PFAM: PP-loop domain protein; KEGG: eok:G2583_0766 phosphoadenosine phosphosulfate reductase family protein; PP-loop domain-containing protein 3404457..3405677 Escherichia coli KO11FL 11777977 YP_005278910.1 CDS EKO11_3263 NC_016902.1 3405650 3406279 D KEGG: ssn:SSON_0553 hypothetical protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; ParB domain-containing protein nuclease 3405650..3406279 Escherichia coli KO11FL 11777978 YP_005278911.1 CDS EKO11_3264 NC_016902.1 3406280 3407440 R PFAM: aminotransferase class I and II; KEGG: sfv:SFV_0549 putative aminotransferase; class I and II aminotransferase complement(3406280..3407440) Escherichia coli KO11FL 11777979 YP_005278912.1 CDS EKO11_3265 NC_016902.1 3407549 3408637 D PFAM: iron-containing alcohol dehydrogenase; KEGG: eoh:ECO103_0608 hypothetical protein; iron-containing alcohol dehydrogenase 3407549..3408637 Escherichia coli KO11FL 11777980 YP_005278913.1 CDS EKO11_3266 NC_016902.1 3408647 3408844 R PFAM: protein of unknown function DUF466; KEGG: sdy:SDY_0530 hypothetical protein; hypothetical protein complement(3408647..3408844) Escherichia coli KO11FL 11777981 YP_005278914.1 CDS EKO11_3267 NC_016902.1 3409026 3411131 R PFAM: carbon starvation protein CstA; KEGG: efe:EFER_2496 carbon starvation protein; carbon starvation protein CstA complement(3409026..3411131) Escherichia coli KO11FL 11777982 YP_005278915.1 CDS EKO11_3268 NC_016902.1 3411312 3411725 R PFAM: thioesterase superfamily protein; KEGG: sdy:SDY_0528 hypothetical protein; thioesterase superfamily protein complement(3411312..3411725) Escherichia coli KO11FL 11777983 YP_005278916.1 CDS EKO11_3269 NC_016902.1 3411728 3412474 R PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ebw:BWG_0469 2,3-dihydroxybenzoate-2,3-dehydrogenase; short-chain dehydrogenase/reductase SDR complement(3411728..3412474) Escherichia coli KO11FL 11779658 YP_005278917.1 CDS EKO11_3270 NC_016902.1 3412474 3413331 R KEGG: sfl:SF0509 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatase; PFAM: isochorismatase hydrolase; phosphopantetheine-binding; isochorismatase complement(3412474..3413331) Escherichia coli KO11FL 11777984 YP_005278918.1 CDS EKO11_3271 NC_016902.1 3413345 3414955 R KEGG: eoi:ECO111_0624 enterobactin synthase subunit E; TIGRFAM: 2,3-dihydroxybenzoate-AMP ligase; PFAM: AMP-dependent synthetase and ligase; 2,3-dihydroxybenzoate-AMP ligase complement(3413345..3414955) Escherichia coli KO11FL 11777985 YP_005278919.1 CDS EKO11_3272 NC_016902.1 3414965 3416140 R KEGG: eoh:ECO103_0601 isochorismate synthase 1; TIGRFAM: isochorismate synthase; PFAM: Chorismate binding-like; isochorismate synthase complement(3414965..3416140) Escherichia coli KO11FL 11779659 YP_005278920.1 CDS EKO11_3273 NC_016902.1 3416515 3417471 D PFAM: periplasmic binding protein; KEGG: ebd:ECBD_3063 iron-enterobactin transporter periplasmic binding protein; periplasmic binding protein 3416515..3417471 Escherichia coli KO11FL 11777986 YP_005278921.1 CDS EKO11_3274 NC_016902.1 3417475 3418725 R PFAM: major facilitator superfamily MFS_1; KEGG: ssn:SSON_0542 enterobactin exporter EntS; major facilitator superfamily protein complement(3417475..3418725) Escherichia coli KO11FL 11777987 YP_005278922.1 CDS EKO11_3275 NC_016902.1 3418836 3419840 D PFAM: transport system permease protein; KEGG: ebd:ECBD_3065 iron-enterobactin transporter membrane protein; transport system permease 3418836..3419840 Escherichia coli KO11FL 11777988 YP_005278923.1 CDS EKO11_3276 NC_016902.1 3419837 3420829 D PFAM: transport system permease protein; KEGG: sfv:SFV_0537 iron-enterobactin transporter permease; transport system permease 3419837..3420829 Escherichia coli KO11FL 11779660 YP_005278924.1 CDS EKO11_3277 NC_016902.1 3420826 3421641 D KEGG: sdy:SDY_0519 iron-enterobactin transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 3420826..3421641 Escherichia coli KO11FL 11779661 YP_005278925.1 CDS EKO11_3278 NC_016902.1 3421638 3422771 R PFAM: lipopolysaccharide biosynthesis protein; KEGG: ssn:SSON_0538 ferric enterobactin transport protein FepE; lipopolysaccharide biosynthesis protein complement(3421638..3422771) Escherichia coli KO11FL 11777989 YP_005278926.1 CDS EKO11_3279 NC_016902.1 3422987 3426868 R KEGG: eoi:ECO111_0616 enterobactin synthase subunit F; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Thioesterase; amino acid adenylation protein complement(3422987..3426868) Escherichia coli KO11FL 11777990 YP_005278927.1 CDS EKO11_3280 NC_016902.1 3426865 3427083 R PFAM: MbtH domain protein; KEGG: eoh:ECO103_0593 hypothetical protein; MbtH domain-containing protein complement(3426865..3427083) Escherichia coli KO11FL 11777991 YP_005278928.1 CDS EKO11_3281 NC_016902.1 3427086 3428210 R KEGG: eoi:ECO111_0614 enterobactin/ferric enterobactin esterase; manually curated; PFAM: esterase; esterase complement(3427086..3428210) Escherichia coli KO11FL 11777992 YP_005278929.1 CDS EKO11_3282 NC_016902.1 3428531 3430771 D KEGG: eoi:ECO111_0613 outer membrane receptor FepA; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; TonB-dependent siderophore receptor 3428531..3430771 Escherichia coli KO11FL 11777993 YP_005278930.1 CDS EKO11_3283 NC_016902.1 3430937 3431566 D PFAM: 4'-phosphopantetheinyl transferase; KEGG: sbo:SBO_0443 phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex; 4'-phosphopantetheinyl transferase 3430937..3431566 Escherichia coli KO11FL 11777994 YP_005278931.1 CDS EKO11_3286 NC_016902.1 3432785 3433903 D PFAM: glutamate--cysteine ligase GCS2; KEGG: eoh:ECO103_0586 carboxylate-amine ligase; glutamate--cysteine ligase 3432785..3433903 Escherichia coli KO11FL 11779662 YP_005278932.1 CDS EKO11_3287 NC_016902.1 3433969 3434217 D PFAM: protein of unknown function DUF1158; KEGG: sbc:SbBS512_E0474 putative lipoprotein; hypothetical protein 3433969..3434217 Escherichia coli KO11FL 11777997 YP_005278933.1 CDS EKO11_3288 NC_016902.1 3434282 3434650 D KEGG: sdy:SDY_0492 hypothetical protein; hypothetical protein 3434282..3434650 Escherichia coli KO11FL 11777998 YP_005278934.1 CDS EKO11_3289 NC_016902.1 3434744 3435397 D KEGG: sbo:SBO_0439 dihydropteridine reductase; PFAM: nitroreductase; 6,7-dihydropteridine reductase 3434744..3435397 Escherichia coli KO11FL 11777999 YP_005278935.1 CDS EKO11_3290 NC_016902.1 3435505 3436752 D PFAM: MscS Mechanosensitive ion channel; KEGG: eoh:ECO103_0582 putative mechanosensitive channel; mechanosensitive ion channel MscS 3435505..3436752 Escherichia coli KO11FL 11778000 YP_005278936.1 CDS EKO11_3291 NC_016902.1 3436820 3438196 R PFAM: amino acid permease-associated region; KEGG: sfv:SFV_0516 phenylalanine transporter; amino acid permease complement(3436820..3438196) Escherichia coli KO11FL 11779663 YP_005278937.1 CDS EKO11_3292 NC_016902.1 3438298 3441441 R KEGG: eoh:ECO103_0580 copper/silver efflux system protein CusA; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein; CzcA family heavy metal efflux pump complement(3438298..3441441) Escherichia coli KO11FL 11778001 YP_005278938.1 CDS EKO11_3293 NC_016902.1 3441453 3442676 R TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: eoi:ECO111_0601 copper/silver efflux system membrane fusion protein CusB; RND family efflux transporter MFP subunit complement(3441453..3442676) Escherichia coli KO11FL 11778002 YP_005278939.1 CDS EKO11_3294 NC_016902.1 3442692 3443024 R KEGG: ebd:ECBD_3089 periplasmic copper-binding protein; copper-binding protein complement(3442692..3443024) Escherichia coli KO11FL 11778003 YP_005278940.1 CDS EKO11_3295 NC_016902.1 3443048 3444430 R KEGG: eoh:ECO103_0577 copper/silver efflux system outer membrane protein CusC; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; NodT family RND efflux system outer membrane lipoprotein complement(3443048..3444430) Escherichia coli KO11FL 11778004 YP_005278941.1 CDS EKO11_3296 NC_016902.1 3444587 3445270 D TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; KEGG: ebd:ECBD_3091 DNA-binding transcriptional activator CusR; SMART: response regulator receiver; two component heavy metal response transcriptional regulator, winged helix family 3444587..3445270 Escherichia coli KO11FL 11778005 YP_005278942.1 CDS EKO11_3297 NC_016902.1 3445260 3446708 D TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: ebd:ECBD_3092 sensor kinase CusS; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; heavy metal sensor signal transduction histidine kinase 3445260..3446708 Escherichia coli KO11FL 11778006 YP_005278943.1 CDS EKO11_3298 NC_016902.1 3447445 3449346 D TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; KEGG: eoj:ECO26_0641 putative Vgr protein; ImpA family type VI secretion-associated protein 3447445..3449346 Escherichia coli KO11FL 11778007 YP_005278944.1 CDS EKO11_3299 NC_016902.1 3449374 3449835 D KEGG: ssn:SSON_0519 hypothetical protein; hypothetical protein 3449374..3449835 Escherichia coli KO11FL 11778008 YP_005278945.1 CDS EKO11_3300 NC_016902.1 3449855 3454675 D KEGG: eok:G2583_0728 rhs core protein with extension; TIGRFAM: YD repeat protein; PFAM: PAAR repeat-containing protein; YD repeat-containing protein; YD repeat protein 3449855..3454675 Escherichia coli KO11FL 11778009 YP_005278946.1 CDS EKO11_3301 NC_016902.1 3454663 3455202 D KEGG: bxe:Bxe_B1289 hypothetical protein; hypothetical protein 3454663..3455202 Escherichia coli KO11FL 11778010 YP_005278947.1 CDS EKO11_3302 NC_016902.1 3455329 3457473 D KEGG: ssn:SSON_0517 rhs core protein with extension; TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; YD repeat protein 3455329..3457473 Escherichia coli KO11FL 11778011 YP_005278948.1 CDS EKO11_3303 NC_016902.1 3457473 3457886 D KEGG: plm:Plim_0975 hypothetical protein; hypothetical protein 3457473..3457886 Escherichia coli KO11FL 11778012 YP_005278949.1 CDS EKO11_3304 NC_016902.1 3458133 3459932 D PFAM: YD repeat-containing protein; KEGG: ssn:SSON_0517 rhs core protein with extension; YD repeat-containing protein 3458133..3459932 Escherichia coli KO11FL 11778013 YP_005278950.1 CDS EKO11_3305 NC_016902.1 3459959 3460180 D KEGG: eok:G2583_0725 hypothetical protein; hypothetical protein 3459959..3460180 Escherichia coli KO11FL 11778014 YP_005278951.1 CDS EKO11_3307 NC_016902.1 3460710 3461846 D PFAM: transposase IS4 family protein; KEGG: eoi:ECO111_0591 putative H repeat-associated protein; transposase IS4 family protein 3460710..3461846 Escherichia coli KO11FL 11778015 YP_005278952.1 CDS EKO11_3308 NC_016902.1 3462115 3464352 D PFAM: General secretory system II protein E domain protein; KEGG: eoj:ECO26_0635 bacteriophage N4 adsorption protein B; General secretory system II protein E domain-containing protein 3462115..3464352 Escherichia coli KO11FL 11778016 YP_005278953.1 CDS EKO11_3309 NC_016902.1 3464339 3467311 D PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: eoh:ECO103_0569 bacteriophage N4 receptor, outer membrane subunit; hypothetical protein 3464339..3467311 Escherichia coli KO11FL 11778017 YP_005278954.1 CDS EKO11_3310 NC_016902.1 3467312 3468202 D KEGG: eoi:ECO111_0588 hypothetical protein; hypothetical protein 3467312..3468202 Escherichia coli KO11FL 11778018 YP_005278955.1 CDS EKO11_3311 NC_016902.1 3468385 3469146 D KEGG: eoh:ECO103_0567 DNA-binding transcriptional activator EnvY of porin biosynthesis; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 3468385..3469146 Escherichia coli KO11FL 11779665 YP_005278956.1 CDS EKO11_3312 NC_016902.1 3469448 3470143 D manually curated; PFAM: response regulator receiver; regulatory protein LuxR; KEGG: eok:G2583_0655 fimbrial Z protein; SMART: response regulator receiver; regulatory protein LuxR; two component transcriptional regulator, LuxR family 3469448..3470143 Escherichia coli KO11FL 11778020 YP_005278957.1 CDS EKO11_3313 NC_016902.1 3470146 3470661 R PFAM: Fimbrial protein domain-containing protein; KEGG: eoh:ECO103_0506 putative fimbrial protein; fimbrial protein domain-containing protein complement(3470146..3470661) Escherichia coli KO11FL 11778021 YP_005278958.1 CDS EKO11_3314 NC_016902.1 3470672 3471679 R KEGG: eok:G2583_0653 involved in fimbrial asembly precursor; involved in fimbrial asembly precursor complement(3470672..3471679) Escherichia coli KO11FL 11778022 YP_005278959.1 CDS EKO11_3316 NC_016902.1 3474331 3475023 R PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: eoh:ECO103_0503 pilin chaperone SfmC, periplasmic; Pili assembly chaperone, N-terminal protein complement(3474331..3475023) Escherichia coli KO11FL 11778024 YP_005278960.1 CDS EKO11_3317 NC_016902.1 3475243 3475785 R PFAM: Fimbrial protein domain-containing protein; KEGG: ebd:ECBD_3128 fimbrial protein; fimbrial protein domain-containing protein complement(3475243..3475785) Escherichia coli KO11FL 11778025 YP_005278961.1 CDS EKO11_3318 NC_016902.1 3476266 3477132 D KEGG: eoi:ECO111_0561 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; methylenetetrahydrofolate dehydrogenase 3476266..3477132 Escherichia coli KO11FL 11778026 YP_005278962.1 CDS EKO11_3319 NC_016902.1 3477134 3477346 D KEGG: sdy:SDY_0280 hypothetical protein; hypothetical protein 3477134..3477346 Escherichia coli KO11FL 11778027 YP_005278963.1 CDS EKO11_3320 NC_016902.1 3477454 3477975 D PFAM: membrane-bound metal-dependent hydrolase; KEGG: sbc:SbBS512_E0447 hypothetical protein; membrane-bound metal-dependent hydrolase 3477454..3477975 Escherichia coli KO11FL 11778028 YP_005278964.1 CDS EKO11_3321 NC_016902.1 3478011 3479396 R TIGRFAM: cysteinyl-tRNA synthetase; KEGG: sfv:SFV_0484 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR; cysteinyl-tRNA synthetase complement(3478011..3479396) Escherichia coli KO11FL 11778029 YP_005278965.1 CDS EKO11_3322 NC_016902.1 3479570 3480064 D KEGG: ebd:ECBD_3133 peptidyl-prolyl cis-trans isomerase B (rotamase B); PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; peptidylprolyl isomerase 3479570..3480064 Escherichia coli KO11FL 11778030 YP_005278966.1 CDS EKO11_3323 NC_016902.1 3480067 3480789 D KEGG: sbc:SbBS512_E0450 UDP-2,3-diacylglucosamine hydrolase; TIGRFAM: UDP-2,3-diacylglucosamine hydrolase; PFAM: metallophosphoesterase; UDP-2,3-diacylglucosamine hydrolase 3480067..3480789 Escherichia coli KO11FL 11778031 YP_005278967.1 CDS EKO11_3324 NC_016902.1 3480907 3481416 D TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; KEGG: sbo:SBO_0420 phosphoribosylaminoimidazole carboxylase; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylaminoimidazole carboxylase catalytic subunit 3480907..3481416 Escherichia coli KO11FL 11778032 YP_005278968.1 CDS EKO11_3325 NC_016902.1 3481413 3482480 D TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; KEGG: ebd:ECBD_3136 phosphoribosylaminoimidazole carboxylase ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; phosphoribosylaminoimidazole carboxylase ATPase subunit 3481413..3482480 Escherichia coli KO11FL 11778033 YP_005278969.1 CDS EKO11_3326 NC_016902.1 3482617 3483510 R TIGRFAM: carbamate kinase; KEGG: ssn:SSON_0497 carbamate kinase; PFAM: aspartate/glutamate/uridylate kinase; carbamate kinase complement(3482617..3483510) Escherichia coli KO11FL 11778034 YP_005278970.1 CDS EKO11_3327 NC_016902.1 3483507 3484322 R PFAM: Protein of unknown function DUF2877; KEGG: eok:G2583_0640 putative carboxylase; hypothetical protein complement(3483507..3484322) Escherichia coli KO11FL 11779666 YP_005278971.1 CDS EKO11_3328 NC_016902.1 3484333 3485592 R PFAM: protein of unknown function DUF1116; KEGG: ebd:ECBD_3139 protein of unknown function DUF1116; hypothetical protein complement(3484333..3485592) Escherichia coli KO11FL 11778035 YP_005278972.1 CDS EKO11_3329 NC_016902.1 3485602 3487269 R PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding domain protein; KEGG: ebd:ECBD_3140 membrane protein FdrA; ATP-citrate lyase/succinyl-CoA ligase complement(3485602..3487269) Escherichia coli KO11FL 11778036 YP_005278973.1 CDS EKO11_3330 NC_016902.1 3487586 3488635 D KEGG: eoh:ECO103_0489 ureidoglycolate dehydrogenase; TIGRFAM: ureidoglycolate dehydrogenase; PFAM: Malate/L-lactate dehydrogenase; ureidoglycolate dehydrogenase 3487586..3488635 Escherichia coli KO11FL 11778037 YP_005278974.1 CDS EKO11_3331 NC_016902.1 3488657 3489892 D TIGRFAM: allantoate amidohydrolase; amidase, hydantoinase/carbamoylase family; KEGG: ebd:ECBD_3142 allantoate amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; allantoate amidohydrolase 3488657..3489892 Escherichia coli KO11FL 11778038 YP_005278975.1 CDS EKO11_3332 NC_016902.1 3489903 3490688 D KEGG: ebd:ECBD_3143 hypothetical protein; TIGRFAM: allantoin catabolism protein; PFAM: protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein; allantoin catabolism protein 3489903..3490688 Escherichia coli KO11FL 11779667 YP_005278976.1 CDS EKO11_3333 NC_016902.1 3490817 3491962 R TIGRFAM: glycerate kinase; KEGG: eoh:ECO103_0486 glycerate kinase II; PFAM: glycerate kinase; glycerate kinase complement(3490817..3491962) Escherichia coli KO11FL 11779668 YP_005278977.1 CDS EKO11_3334 NC_016902.1 3491984 3493285 R PFAM: Xanthine/uracil/vitamin C permease; KEGG: ebd:ECBD_3145 putative purine permease YbbY; xanthine/uracil/vitamin C permease complement(3491984..3493285) Escherichia coli KO11FL 11778039 YP_005278978.1 CDS EKO11_3335 NC_016902.1 3493342 3494703 R KEGG: eoi:ECO111_0544 allantoinase; TIGRFAM: allantoinase; PFAM: amidohydrolase; allantoinase complement(3493342..3494703) Escherichia coli KO11FL 11778040 YP_005278979.1 CDS EKO11_3336 NC_016902.1 3494763 3496217 R KEGG: eoh:ECO103_0483 allantoin permease; TIGRFAM: NCS1 nucleoside transporter family; PFAM: permease for cytosine/purines uracil thiamine allantoin; NCS1 nucleoside transporter family complement(3494763..3496217) Escherichia coli KO11FL 11778041 YP_005278980.1 CDS EKO11_3337 NC_016902.1 3496386 3497264 R KEGG: eoh:ECO103_0482 tartronate semialdehyde reductase, NADH-dependent; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 2-hydroxy-3-oxopropionate reductase complement(3496386..3497264) Escherichia coli KO11FL 11778042 YP_005278981.1 CDS EKO11_3338 NC_016902.1 3497364 3498140 R TIGRFAM: hydroxypyruvate isomerase; KEGG: eok:G2583_0628 glyoxylate-induced protein; PFAM: Xylose isomerase domain-containing protein TIM barrel; hydroxypyruvate isomerase complement(3497364..3498140) Escherichia coli KO11FL 11778043 YP_005278982.1 CDS EKO11_3339 NC_016902.1 3498153 3499934 R KEGG: ebd:ECBD_3150 glyoxylate carboligase; TIGRFAM: glyoxylate carboligase; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; glyoxylate carboligase complement(3498153..3499934) Escherichia coli KO11FL 11778044 YP_005278983.1 CDS EKO11_3340 NC_016902.1 3500024 3500839 R KEGG: sbo:SBO_0410 DNA-binding transcriptional repressor AllR; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; IclR family transcriptional regulator complement(3500024..3500839) Escherichia coli KO11FL 11778045 YP_005278984.1 CDS EKO11_3341 NC_016902.1 3500917 3501399 R KEGG: eoh:ECO103_0478 ureidoglycolate hydrolase; PFAM: Ureidoglycolate hydrolase; ureidoglycolate hydrolase complement(3500917..3501399) Escherichia coli KO11FL 11778046 YP_005278985.1 CDS EKO11_3342 NC_016902.1 3501629 3502555 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: eoh:ECO103_0477 DNA-binding transcriptional activator AllS; LysR family transcriptional regulator 3501629..3502555 Escherichia coli KO11FL 11778047 YP_005278986.1 CDS EKO11_3343 NC_016902.1 3502624 3503718 D KEGG: eoh:ECO103_0476 tRNA 2-selenouridine synthase; TIGRFAM: tRNA 2-selenouridine synthase; SMART: Rhodanese domain protein; tRNA 2-selenouridine synthase 3502624..3503718 Escherichia coli KO11FL 11778048 YP_005278987.1 CDS EKO11_3344 NC_016902.1 3503834 3504205 D KEGG: sdy:SDY_0400 hypothetical protein; hypothetical protein 3503834..3504205 Escherichia coli KO11FL 11778049 YP_005278988.1 CDS EKO11_3346 NC_016902.1 3504720 3505211 R KEGG: eoh:ECO103_0474 hypothetical protein; hypothetical protein complement(3504720..3505211) Escherichia coli KO11FL 11778051 YP_005278989.1 CDS EKO11_3347 NC_016902.1 3505192 3505902 R PFAM: RHS protein; KEGG: ebd:ECBD_3157 rhs protein; RHS protein complement(3505192..3505902) Escherichia coli KO11FL 11778052 YP_005278990.1 CDS EKO11_3348 NC_016902.1 3505902 3506270 R KEGG: ebd:ECBD_3158 hypothetical protein; hypothetical protein complement(3505902..3506270) Escherichia coli KO11FL 11778053 YP_005278991.1 CDS EKO11_3349 NC_016902.1 3506310 3510599 R KEGG: ebw:BWG_0378 RhsD element protein; TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein; YD repeat protein complement(3506310..3510599) Escherichia coli KO11FL 11778054 YP_005278992.1 CDS EKO11_3350 NC_016902.1 3511029 3513443 R PFAM: protein of unknown function DUF214; KEGG: ebw:BWG_0377 putative inner membrane protein; hypothetical protein complement(3511029..3513443) Escherichia coli KO11FL 11778055 YP_005278993.1 CDS EKO11_3351 NC_016902.1 3513440 3514126 R KEGG: sbc:SbBS512_E0430 putative ABC transporter ATP-binding protein YbbA; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(3513440..3514126) Escherichia coli KO11FL 11778056 YP_005278994.1 CDS EKO11_3352 NC_016902.1 3514094 3514720 D manually curated; KEGG: efe:EFER_0552 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; PFAM: lipolytic protein G-D-S-L family; lysophospholipase 3514094..3514720 Escherichia coli KO11FL 11779669 YP_005278995.1 CDS EKO11_3353 NC_016902.1 3514749 3515519 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ssn:SSON_0482 short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 3514749..3515519 Escherichia coli KO11FL 11779670 YP_005278996.1 CDS EKO11_3354 NC_016902.1 3515580 3516434 D PFAM: Thioredoxin domain-containing protein; KEGG: sdy:SDY_0407 putative thioredoxin-like protein; thioredoxin domain-containing protein 3515580..3516434 Escherichia coli KO11FL 11778057 YP_005278997.1 CDS EKO11_3355 NC_016902.1 3516497 3517276 R PFAM: Conserved hypothetical protein CHP00245; KEGG: ssn:SSON_0480 putative metal resistance protein; hypothetical protein complement(3516497..3517276) Escherichia coli KO11FL 11778058 YP_005278998.1 CDS EKO11_3356 NC_016902.1 3517263 3517940 R KEGG: ebd:ECBD_3166 putative ABC transporter ATP-binding protein YbbL; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(3517263..3517940) Escherichia coli KO11FL 11778059 YP_005278999.1 CDS EKO11_3357 NC_016902.1 3518086 3519003 D KEGG: sbo:SBO_0391 putative protease; PFAM: band 7 protein; SMART: band 7 protein; hypothetical protein 3518086..3519003 Escherichia coli KO11FL 11778060 YP_005279000.1 CDS EKO11_3358 NC_016902.1 3519000 3519458 D PFAM: protein of unknown function DUF107; KEGG: ebw:BWG_0369 conserved inner membrane protein; hypothetical protein 3519000..3519458 Escherichia coli KO11FL 11778061 YP_005279001.1 CDS EKO11_3359 NC_016902.1 3519459 3519866 R TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; KEGG: sbc:SbBS512_E0422 DNA-binding transcriptional regulator CueR; SMART: regulatory protein MerR; MerR family transcriptional regulator complement(3519459..3519866) Escherichia coli KO11FL 11779671 YP_005279002.1 CDS EKO11_3361 NC_016902.1 3519991 3521283 R PFAM: amino acid permease-associated region; KEGG: ssn:SSON_0475 putative amino acid/amine transport protein; amino acid permease complement(3519991..3521283) Escherichia coli KO11FL 11778063 YP_005279003.1 CDS EKO11_3362 NC_016902.1 3521286 3522218 R TIGRFAM: Glutaminase, core; KEGG: ssn:SSON_0474 glutaminase; PFAM: Glutaminase, core; glutaminase complement(3521286..3522218) Escherichia coli KO11FL 11778064 YP_005279004.1 CDS EKO11_3363 NC_016902.1 3522480 3524984 D KEGG: eoi:ECO111_0519 copper exporting ATPase; TIGRFAM: copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; copper-translocating P-type ATPase 3522480..3524984 Escherichia coli KO11FL 11778065 YP_005279005.1 CDS EKO11_3364 NC_016902.1 3525098 3525493 R TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: ssn:SSON_0472 hypothetical protein; SMART: helix-turn-helix domain protein; plasmid maintenance system antidote protein complement(3525098..3525493) Escherichia coli KO11FL 11778066 YP_005279006.1 CDS EKO11_3365 NC_016902.1 3525577 3526371 D PFAM: GumN family protein; KEGG: eoi:ECO111_0517 hypothetical protein; GumN family protein 3525577..3526371 Escherichia coli KO11FL 11778067 YP_005279007.1 CDS EKO11_3366 NC_016902.1 3526575 3527054 D KEGG: sdy:SDY_0437 hypothetical protein; TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; ybaK/ebsC protein 3526575..3527054 Escherichia coli KO11FL 11778068 YP_005279008.1 CDS EKO11_3367 NC_016902.1 3527091 3528743 R PFAM: 5'-Nucleotidase domain-containing protein; metallophosphoesterase; KEGG: eoh:ECO103_0456 bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; 5'-nucleotidase complement(3527091..3528743) Escherichia coli KO11FL 11778069 YP_005279009.1 CDS EKO11_3368 NC_016902.1 3528961 3530181 D PFAM: major facilitator superfamily MFS_1; KEGG: eoi:ECO111_0514 putative fosmidomycin efflux system protein Fsr; major facilitator superfamily protein 3528961..3530181 Escherichia coli KO11FL 11778070 YP_005279010.1 CDS EKO11_3369 NC_016902.1 3530419 3532095 D KEGG: eoi:ECO111_0513 putative cation:proton antiport protein; TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; potassium efflux system protein 3530419..3532095 Escherichia coli KO11FL 11778071 YP_005279011.1 CDS EKO11_3370 NC_016902.1 3532228 3533532 R KEGG: sbc:SbBS512_E0409 inosine kinase; PFAM: PfkB domain protein; Inosine kinase complement(3532228..3533532) Escherichia coli KO11FL 11778072 YP_005279012.1 CDS EKO11_3371 NC_016902.1 3533684 3534643 D KEGG: eoh:ECO103_0452 acetyl esterase; acetyl esterase 3533684..3534643 Escherichia coli KO11FL 11778073 YP_005279013.1 CDS EKO11_3372 NC_016902.1 3534640 3535602 R TIGRFAM: ferrochelatase; KEGG: eoh:ECO103_0451 ferrochelatase; PFAM: ferrochelatase; ferrochelatase complement(3534640..3535602) Escherichia coli KO11FL 11779672 YP_005279014.1 CDS EKO11_3373 NC_016902.1 3535838 3536542 R manually curated; TIGRFAM: adenylate kinase; KEGG: eok:G2583_0586 adenylate kinase; PFAM: adenylate kinase; adenylate kinase lid domain-containing protein; adenylate kinase complement(3535838..3536542) Escherichia coli KO11FL 11778074 YP_005279015.1 CDS EKO11_3374 NC_016902.1 3536663 3538537 R KEGG: eoh:ECO103_0449 heat shock protein 90; PFAM: Heat shock protein Hsp90-like; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; Heat shock protein Hsp90-like protein complement(3536663..3538537) Escherichia coli KO11FL 11778075 YP_005279016.1 CDS EKO11_3375 NC_016902.1 3538647 3539252 R TIGRFAM: recombination protein RecR; PFAM: TOPRIM domain-containing protein; Zinc finger C4-type, RecR; KEGG: sbc:SbBS512_E0404 recombination protein RecR; SMART: Toprim sub domain-containing protein; recombination protein RecR complement(3538647..3539252) Escherichia coli KO11FL 11779673 YP_005279017.1 CDS EKO11_3376 NC_016902.1 3539252 3539581 R PFAM: Uncharacterised protein family UPF0133; KEGG: sdy:SDY_0448 hypothetical protein; hypothetical protein complement(3539252..3539581) Escherichia coli KO11FL 11778076 YP_005279018.1 CDS EKO11_3377 NC_016902.1 3539634 3541565 R TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; KEGG: eoh:ECO103_0446 DNA polymerase III subunits gamma and tau; SMART: AAA ATPase; DNA polymerase III subunits gamma and tau complement(3539634..3541565) Escherichia coli KO11FL 11778077 YP_005279019.1 CDS EKO11_3378 NC_016902.1 3541694 3542245 R KEGG: sdy:SDY_0450 adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; adenine phosphoribosyltransferase complement(3541694..3542245) Escherichia coli KO11FL 11778078 YP_005279020.1 CDS EKO11_3379 NC_016902.1 3542398 3542775 R PFAM: protein of unknown function DUF454; KEGG: sdy:SDY_0451 hypothetical protein; hypothetical protein complement(3542398..3542775) Escherichia coli KO11FL 11778079 YP_005279021.1 CDS EKO11_3380 NC_016902.1 3542845 3543372 D PFAM: Primosomal replication priB and priC; KEGG: sbc:SbBS512_E0399 primosomal replication protein N''; primosomal replication priB and priC 3542845..3543372 Escherichia coli KO11FL 11778080 YP_005279022.1 CDS EKO11_3381 NC_016902.1 3543386 3543547 D PFAM: Protein of unknown function DUF2496, YbaM-related; KEGG: sbc:SbBS512_E0398 hypothetical protein; hypothetical protein 3543386..3543547 Escherichia coli KO11FL 11778081 YP_005279023.1 CDS EKO11_3382 NC_016902.1 3543759 3547121 R PFAM: MscS Mechanosensitive ion channel; KEGG: ssn:SSON_0452 potassium efflux protein KefA; mechanosensitive ion channel MscS complement(3543759..3547121) Escherichia coli KO11FL 11778082 YP_005279024.1 CDS EKO11_3383 NC_016902.1 3547249 3547896 R PFAM: Tetracycline transcriptional repressor MAATS-type domain-containing protein; regulatory protein TetR; KEGG: sdy:SDY_0455 DNA-binding transcriptional repressor AcrR; TetR family transcriptional regulator complement(3547249..3547896) Escherichia coli KO11FL 11778083 YP_005279025.1 CDS EKO11_3384 NC_016902.1 3548038 3549231 D KEGG: ebd:ECBD_3193 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; RND family efflux transporter MFP subunit 3548038..3549231 Escherichia coli KO11FL 11778084 YP_005279026.1 CDS EKO11_3385 NC_016902.1 3549254 3552403 D KEGG: sbo:SBO_0362 acridine efflux pump; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 3549254..3552403 Escherichia coli KO11FL 11778085 YP_005279027.1 CDS EKO11_3386 NC_016902.1 3552949 3553323 D PFAM: Biofilm formation regulator YbaJ; KEGG: sdy:SDY_0458 hypothetical protein; Biofilm formation regulator YbaJ 3552949..3553323 Escherichia coli KO11FL 11778086 YP_005279028.1 CDS EKO11_3387 NC_016902.1 3553349 3553567 D PFAM: Haemolysin expression modulating family protein; KEGG: sdy:SDY_0459 hemolysin expression-modulating protein; hemolysin expression modulating family protein 3553349..3553567 Escherichia coli KO11FL 11778087 YP_005279029.1 CDS EKO11_3388 NC_016902.1 3553739 3554290 D PFAM: transferase hexapeptide repeat containing protein; KEGG: sdy:SDY_0460 maltose O-acetyltransferase; transferase hexapeptide repeat containing protein 3553739..3554290 Escherichia coli KO11FL 11778088 YP_005279030.1 CDS EKO11_3389 NC_016902.1 3554406 3554876 D PFAM: Extracytoplasmic function sigma factor YlaC; KEGG: sdy:SDY_0461 hypothetical protein; Extracytoplasmic function sigma factor YlaC 3554406..3554876 Escherichia coli KO11FL 11778089 YP_005279031.1 CDS EKO11_3390 NC_016902.1 3555040 3556590 D KEGG: eoh:ECO103_0433 hypothetical protein; PFAM: EAL domain protein; SMART: EAL domain protein; EAL domain-containing protein 3555040..3556590 Escherichia coli KO11FL 11778090 YP_005279032.1 CDS EKO11_3391 NC_016902.1 3556632 3556985 R PFAM: protein of unknown function DUF1428; KEGG: sdy:SDY_0392 hypothetical protein; hypothetical protein complement(3556632..3556985) Escherichia coli KO11FL 11778091 YP_005279033.1 CDS EKO11_3392 NC_016902.1 3557364 3557675 D KEGG: sdy:SDY_0391 hypothetical protein; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylated-DNA--protein-cysteine methyltransferase 3557364..3557675 Escherichia coli KO11FL 11779674 YP_005279034.1 CDS EKO11_3393 NC_016902.1 3557706 3558278 R KEGG: sbo:SBO_0348 glycoprotein/polysaccharide metabolism; glycoprotein/polysaccharide metabolism complement(3557706..3558278) Escherichia coli KO11FL 11778093 YP_005279035.1 CDS EKO11_3394 NC_016902.1 3558496 3559356 D KEGG: ssn:SSON_0440 acyl-CoA thioesterase II; TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase; acyl-CoA thioesterase II 3558496..3559356 Escherichia coli KO11FL 11778094 YP_005279036.1 CDS EKO11_3395 NC_016902.1 3559404 3560690 R KEGG: ssn:SSON_0439 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter; ammonium transporter complement(3559404..3560690) Escherichia coli KO11FL 11778095 YP_005279037.1 CDS EKO11_3396 NC_016902.1 3560720 3561196 R KEGG: sfv:SFV_0424 nitrogen regulatory protein P-II 2; manually curated; PFAM: nitrogen regulatory protein P-II; nitrogen regulatory protein P-II complement(3560720..3561196) Escherichia coli KO11FL 11778096 YP_005279038.1 CDS EKO11_3397 NC_016902.1 3561239 3563020 R KEGG: sbo:SBO_0344 putative multidrug transporter membrane\ATP-binding components; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; ABC transporter complement(3561239..3563020) Escherichia coli KO11FL 11778097 YP_005279039.1 CDS EKO11_3398 NC_016902.1 3563013 3564785 R KEGG: ebd:ECBD_3207 putative multidrug transporter membrane\ATP-binding components; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; ABC transporter complement(3563013..3564785) Escherichia coli KO11FL 11778098 YP_005279040.1 CDS EKO11_3399 NC_016902.1 3564815 3565501 R manually curated; PFAM: Transcription regulator AsnC-type-like; KEGG: eok:G2583_0559 putative transcriptional regulator YbaO; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator complement(3564815..3565501) Escherichia coli KO11FL 11778099 YP_005279041.1 CDS EKO11_3400 NC_016902.1 3565426 3566256 R manually curated; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; KEGG: ssn:SSON_0434 hypothetical protein; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; cof family hydrolase complement(3565426..3566256) Escherichia coli KO11FL 11779675 YP_005279042.1 CDS EKO11_3401 NC_016902.1 3566344 3568044 D PFAM: extracellular solute-binding protein family 5; KEGG: sbc:SbBS512_E0368 extracellular solute-binding protein; family 5 extracellular solute-binding protein 3566344..3568044 Escherichia coli KO11FL 11778100 YP_005279043.1 CDS EKO11_3402 NC_016902.1 3568109 3568804 D KEGG: sbc:SbBS512_E0367 queuosine biosynthesis protein QueC; TIGRFAM: exsB protein; PFAM: Queuosine synthesis-like; exsB protein 3568109..3568804 Escherichia coli KO11FL 11778101 YP_005279044.1 CDS EKO11_3403 NC_016902.1 3568856 3569254 R PFAM: thioesterase superfamily protein; KEGG: sbc:SbBS512_E0366 thioesterase family protein; thioesterase superfamily protein complement(3568856..3569254) Escherichia coli KO11FL 11778102 YP_005279045.1 CDS EKO11_3404 NC_016902.1 3569348 3569719 R TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; KEGG: sdy:SDY_0290 hypothetical protein; competence protein ComEA complement(3569348..3569719) Escherichia coli KO11FL 11778103 YP_005279046.1 CDS EKO11_3405 NC_016902.1 3569870 3571741 R PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: sbo:SBO_0335 peptidyl-prolyl cis-trans isomerase (rotamase D); PpiC-type peptidyl-prolyl cis-trans isomerase complement(3569870..3571741) Escherichia coli KO11FL 11778104 YP_005279047.1 CDS EKO11_3406 NC_016902.1 3571933 3572205 R KEGG: sdy:SDY_0292 transcriptional regulator HU subunit beta; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; histone family protein DNA-binding protein complement(3571933..3572205) Escherichia coli KO11FL 11778105 YP_005279048.1 CDS EKO11_3407 NC_016902.1 3572414 3574768 R SMART: peptidase S16 lon domain protein; AAA ATPase; TIGRFAM: ATP-dependent protease La; KEGG: ssn:SSON_0422 DNA-binding ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein; ATP-dependent protease La complement(3572414..3574768) Escherichia coli KO11FL 11778106 YP_005279049.1 CDS EKO11_3408 NC_016902.1 3574956 3576230 R TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; KEGG: sdy:SDY_0294 ATP-dependent protease ATP-binding subunit ClpX; SMART: AAA ATPase; ATP-dependent Clp protease ATP-binding subunit ClpX complement(3574956..3576230) Escherichia coli KO11FL 11778107 YP_005279050.1 CDS EKO11_3409 NC_016902.1 3576356 3576979 R TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; KEGG: sdy:SDY_0295 ATP-dependent Clp protease proteolytic subunit; PFAM: peptidase S14 ClpP; ATP-dependent Clp protease, proteolytic subunit ClpP complement(3576356..3576979) Escherichia coli KO11FL 11778108 YP_005279051.1 CDS EKO11_3410 NC_016902.1 3577225 3578523 R KEGG: ssn:SSON_0419 trigger factor; TIGRFAM: trigger factor; PFAM: trigger factor domain-containing protein; peptidylprolyl isomerase FKBP-type; trigger factor complement(3577225..3578523) Escherichia coli KO11FL 11778109 YP_005279052.1 CDS EKO11_3411 NC_016902.1 3578867 3579181 R PFAM: BolA family protein; KEGG: sdy:SDY_0298 transcriptional regulator BolA; BolA family protein complement(3578867..3579181) Escherichia coli KO11FL 11779676 YP_005279053.1 CDS EKO11_3412 NC_016902.1 3579387 3580067 D KEGG: sfv:SFV_0409 hypothetical protein; manually curated; PFAM: Uncharacterized lipoprotein; lipoprotein 3579387..3580067 Escherichia coli KO11FL 11778110 YP_005279054.1 CDS EKO11_3413 NC_016902.1 3580111 3581586 D KEGG: sbc:SbBS512_E0355 muropeptide transporter; TIGRFAM: AmpG-related permease; PFAM: major facilitator superfamily MFS_1; AmpG-related permease 3580111..3581586 Escherichia coli KO11FL 11778111 YP_005279055.1 CDS EKO11_3414 NC_016902.1 3582046 3582993 D KEGG: ebd:ECBD_3226 cytochrome o ubiquinol oxidase subunit II; TIGRFAM: ubiquinol oxidase, subunit II; PFAM: COX aromatic rich domain protein; cytochrome c oxidase subunit II; ubiquinol oxidase subunit II 3582046..3582993 Escherichia coli KO11FL 11779677 YP_005279056.1 CDS EKO11_3415 NC_016902.1 3583015 3585006 D TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; KEGG: ssn:SSON_0414 cytochrome o ubiquinol oxidase subunit I; PFAM: cytochrome c oxidase subunit I; cytochrome o ubiquinol oxidase subunit I 3583015..3585006 Escherichia coli KO11FL 11779678 YP_005279057.1 CDS EKO11_3416 NC_016902.1 3584996 3585610 D KEGG: ssn:SSON_0413 cytochrome o ubiquinol oxidase subunit III; TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III; cytochrome o ubiquinol oxidase subunit III 3584996..3585610 Escherichia coli KO11FL 11778112 YP_005279058.1 CDS EKO11_3417 NC_016902.1 3585610 3585939 D KEGG: sbo:SBO_0323 cytochrome o ubiquinol oxidase subunit IV; TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV; cytochrome o ubiquinol oxidase subunit IV 3585610..3585939 Escherichia coli KO11FL 11778113 YP_005279059.1 CDS EKO11_3418 NC_016902.1 3585951 3586841 D KEGG: sbo:SBO_0322 protoheme IX farnesyltransferase; TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; protoheme IX farnesyltransferase 3585951..3586841 Escherichia coli KO11FL 11779679 YP_005279060.1 CDS EKO11_3419 NC_016902.1 3587026 3587337 D PFAM: protein of unknown function DUF1778; KEGG: ssn:SSON_0410 hypothetical protein; hypothetical protein 3587026..3587337 Escherichia coli KO11FL 11778114 YP_005279061.1 CDS EKO11_3420 NC_016902.1 3587321 3587863 D PFAM: GCN5-related N-acetyltransferase; KEGG: ssn:SSON_0409 putative acetyltransferase; N-acetyltransferase GCN5 3587321..3587863 Escherichia coli KO11FL 11779680 YP_005279062.1 CDS EKO11_3422 NC_016902.1 3589251 3590615 D PFAM: major facilitator superfamily MFS_1; KEGG: ebd:ECBD_3234 major facilitator superfamily MFS_1; major facilitator superfamily protein 3589251..3590615 Escherichia coli KO11FL 11778116 YP_005279063.1 CDS EKO11_3423 NC_016902.1 3590743 3591234 R KEGG: sbc:SbBS512_E0348 putative nucleotide-binding protein; manually curated; PFAM: protein of unknown function DUF520; hypothetical protein complement(3590743..3591234) Escherichia coli KO11FL 11778117 YP_005279064.1 CDS EKO11_3424 NC_016902.1 3591402 3592313 D TIGRFAM: 2-dehydropantoate 2-reductase; KEGG: ebd:ECBD_3236 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein; 2-dehydropantoate 2-reductase 3591402..3592313 Escherichia coli KO11FL 11778118 YP_005279065.1 CDS EKO11_3425 NC_016902.1 3592276 3592866 D KEGG: sbc:SbBS512_E0346 DJ-1 family protein; TIGRFAM: DJ-1 family protein; PFAM: ThiJ/PfpI domain-containing protein; DJ-1 family protein 3592276..3592866 Escherichia coli KO11FL 11778119 YP_005279066.1 CDS EKO11_3426 NC_016902.1 3592920 3594368 R KEGG: eoh:ECO103_0397 thiamine biosynthesis protein ThiI; TIGRFAM: thiamine biosynthesis/tRNA modification protein ThiI; PFAM: Thiamine biosynthesis protein-like; THUMP domain-containing protein; thiamine biosynthesis/tRNA modification protein ThiI complement(3592920..3594368) Escherichia coli KO11FL 11778120 YP_005279067.1 CDS EKO11_3427 NC_016902.1 3594574 3594816 D KEGG: sdy:SDY_0308 exodeoxyribonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; exodeoxyribonuclease VII small subunit 3594574..3594816 Escherichia coli KO11FL 11778121 YP_005279068.1 CDS EKO11_3428 NC_016902.1 3594816 3595715 D PFAM: Polyprenyl synthetase; KEGG: eoh:ECO103_0395 geranyltranstransferase; polyprenyl synthetase 3594816..3595715 Escherichia coli KO11FL 11778122 YP_005279069.1 CDS EKO11_3429 NC_016902.1 3595740 3597602 D KEGG: eoi:ECO111_0450 1-deoxy-D-xylulose-5-phosphate synthase; TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain-containing protein; deoxyxylulose-5-phosphate synthase 3595740..3597602 Escherichia coli KO11FL 11778123 YP_005279070.1 CDS EKO11_3430 NC_016902.1 3597782 3598756 D PFAM: aldo/keto reductase; KEGG: ebw:BWG_0301 2-carboxybenzaldehyde reductase; aldo/keto reductase 3597782..3598756 Escherichia coli KO11FL 11778124 YP_005279071.1 CDS EKO11_3431 NC_016902.1 3598810 3599328 R KEGG: sbc:SbBS512_E0339 phosphatidylglycerophosphatase A; PFAM: phosphatidylglycerophosphatase A; phosphatidylglycerophosphatase complement(3598810..3599328) Escherichia coli KO11FL 11779681 YP_005279072.1 CDS EKO11_3432 NC_016902.1 3599306 3600283 R TIGRFAM: thiamine-monophosphate kinase; KEGG: eoh:ECO103_0391 thiamine monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; thiamine-monophosphate kinase complement(3599306..3600283) Escherichia coli KO11FL 11778125 YP_005279073.1 CDS EKO11_3433 NC_016902.1 3600361 3600780 R KEGG: sdy:SDY_0318 transcription antitermination protein NusB; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; NusB antitermination factor complement(3600361..3600780) Escherichia coli KO11FL 11778126 YP_005279074.1 CDS EKO11_3434 NC_016902.1 3600800 3601270 R KEGG: cko:CKO_02746 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase complement(3600800..3601270) Escherichia coli KO11FL 11778127 YP_005279075.1 CDS EKO11_3435 NC_016902.1 3601359 3602462 R TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: eoi:ECO111_0444 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding; riboflavin biosynthesis protein RibD complement(3601359..3602462) Escherichia coli KO11FL 11778128 YP_005279076.1 CDS EKO11_3436 NC_016902.1 3602466 3602915 R PFAM: ATP-cone domain protein; KEGG: sdy:SDY_0321 transcriptional regulator NrdR; ATP-cone domain-containing protein complement(3602466..3602915) Escherichia coli KO11FL 11779682 YP_005279077.1 CDS EKO11_3437 NC_016902.1 3603066 3603605 D KEGG: eoi:ECO111_0442 hypothetical protein; hypothetical protein 3603066..3603605 Escherichia coli KO11FL 11778129 YP_005279078.1 CDS EKO11_3438 NC_016902.1 3603904 3604788 D PFAM: Nucleoside-specific channel-forming protein, Tsx-like; KEGG: sdy:SDY_0323 nucleoside channel; Nucleoside-specific channel-forming protein, Tsx-like protein 3603904..3604788 Escherichia coli KO11FL 11778130 YP_005279079.1 CDS EKO11_3439 NC_016902.1 3604965 3605312 R KEGG: sdy:SDY_0324 hypothetical protein; PFAM: HNH endonuclease; SMART: HNH nuclease; HNH endonuclease complement(3604965..3605312) Escherichia coli KO11FL 11778131 YP_005279080.1 CDS EKO11_3440 NC_016902.1 3605441 3606412 R KEGG: sbc:SbBS512_E0328 preprotein translocase subunit SecF; TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; protein-export membrane protein SecF complement(3605441..3606412) Escherichia coli KO11FL 11778132 YP_005279081.1 CDS EKO11_3441 NC_016902.1 3606423 3608237 R KEGG: sdy:SDY_0326 preprotein translocase subunit SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; protein-export membrane protein SecD complement(3606423..3608237) Escherichia coli KO11FL 11778133 YP_005279082.1 CDS EKO11_3442 NC_016902.1 3608298 3608630 R KEGG: sdy:SDY_0327 preprotein translocase subunit YajC; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; preprotein translocase subunit YajC complement(3608298..3608630) Escherichia coli KO11FL 11778134 YP_005279083.1 CDS EKO11_3443 NC_016902.1 3608653 3609780 R TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; KEGG: sdy:SDY_0328 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase complement(3608653..3609780) Escherichia coli KO11FL 11778135 YP_005279084.1 CDS EKO11_3444 NC_016902.1 3609836 3610906 R KEGG: sdy:SDY_0329 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; S-adenosylmethionine/tRNA-ribosyltransferase- isomerase complement(3609836..3610906) Escherichia coli KO11FL 11778136 YP_005279085.1 CDS EKO11_3445 NC_016902.1 3610999 3611580 D KEGG: ssn:SSON_0381 acyl carrier protein phosphodiesterase; PFAM: protein of unknown function DUF479; ACP phosphodiesterase 3610999..3611580 Escherichia coli KO11FL 11778137 YP_005279086.1 CDS EKO11_3446 NC_016902.1 3611585 3613402 R KEGG: eoj:ECO26_0435 maltodextrin glucosidase; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein Ig domain protein region domain protein; SMART: alpha amylase catalytic sub domain; alpha amylase complement(3611585..3613402) Escherichia coli KO11FL 11778138 YP_005279087.1 CDS EKO11_3447 NC_016902.1 3613558 3614931 R PFAM: amino acid permease-associated region; KEGG: sdy:SDY_0335 putative proline-specific permease; amino acid permease complement(3613558..3614931) Escherichia coli KO11FL 11778139 YP_005279088.1 CDS EKO11_3448 NC_016902.1 3615007 3616326 R KEGG: sdy:SDY_0336 branched chain amino acid transport system II carrier protein; TIGRFAM: branched-chain amino acid transport system II carrier protein; PFAM: branched-chain amino acid transport system II carrier protein; branched-chain amino acid transport system II carrier protein complement(3615007..3616326) Escherichia coli KO11FL 11778140 YP_005279089.1 CDS EKO11_3449 NC_016902.1 3616733 3618028 R TIGRFAM: phosphate regulon sensor kinase PhoR; PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; KEGG: ebw:BWG_0282 phosphate regulon sensor protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAS/PAC sensor signal transduction histidine kinase complement(3616733..3618028) Escherichia coli KO11FL 11778141 YP_005279090.1 CDS EKO11_3450 NC_016902.1 3618086 3618775 R TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; KEGG: sbc:SbBS512_E0318 transcriptional regulator PhoB; SMART: response regulator receiver; winged helix family two component transcriptional regulator PhoB complement(3618086..3618775) Escherichia coli KO11FL 11778142 YP_005279091.1 CDS EKO11_3451 NC_016902.1 3618965 3620167 D KEGG: ebd:ECBD_3263 exonuclease subunit SbcD; TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; nuclease SbcCD subunit D 3618965..3620167 Escherichia coli KO11FL 11778143 YP_005279092.1 CDS EKO11_3452 NC_016902.1 3620164 3623307 D KEGG: etw:ECSP_0459 exonuclease subunit SbcC; TIGRFAM: exonuclease SbcC; PFAM: SMC domain protein; exonuclease SbcC 3620164..3623307 Escherichia coli KO11FL 11778144 YP_005279093.1 CDS EKO11_3453 NC_016902.1 3623349 3624617 D PFAM: major facilitator superfamily MFS_1; KEGG: eok:G2583_0504 protein AraJ; major facilitator superfamily protein 3623349..3624617 Escherichia coli KO11FL 11778145 YP_005279094.1 CDS EKO11_3454 NC_016902.1 3624760 3625668 R PFAM: ROK family protein; KEGG: eoi:ECO111_0424 fructokinase; ROK family protein complement(3624760..3625668) Escherichia coli KO11FL 11779683 YP_005279095.1 CDS EKO11_3455 NC_016902.1 3625727 3626704 D PFAM: exonuclease RdgC; KEGG: ebd:ECBD_3268 putative exonuclease RdgC; exonuclease RdgC 3625727..3626704 Escherichia coli KO11FL 11778146 YP_005279096.1 CDS EKO11_3456 NC_016902.1 3626862 3627143 R manually curated; KEGG: sbc:SbBS512_E0310 hypothetical protein; hypothetical protein complement(3626862..3627143) Escherichia coli KO11FL 11778147 YP_005279097.1 CDS EKO11_3457 NC_016902.1 3627351 3627635 R PFAM: protein of unknown function DUF1255; KEGG: sbc:SbBS512_E0308 hypothetical protein; hypothetical protein complement(3627351..3627635) Escherichia coli KO11FL 11779684 YP_005279098.1 CDS EKO11_3458 NC_016902.1 3627707 3628384 R PFAM: AroM family protein; KEGG: sbc:SbBS512_E0307 hypothetical protein; AroM family protein complement(3627707..3628384) Escherichia coli KO11FL 11778148 YP_005279099.1 CDS EKO11_3459 NC_016902.1 3628642 3628833 R KEGG: sbc:SbBS512_E0306 hypothetical protein; hypothetical protein complement(3628642..3628833) Escherichia coli KO11FL 11779685 YP_005279100.1 CDS EKO11_3460 NC_016902.1 3628883 3629407 R KEGG: sbo:SBO_0283 shikimate kinase II; PFAM: shikimate kinase; shikimate kinase complement(3628883..3629407) Escherichia coli KO11FL 11778149 YP_005279101.1 CDS EKO11_3461 NC_016902.1 3629590 3630048 R PFAM: protein of unknown function DUF188; KEGG: sdy:SDY_0357 hypothetical protein; hypothetical protein complement(3629590..3630048) Escherichia coli KO11FL 11778150 YP_005279102.1 CDS EKO11_3462 NC_016902.1 3630168 3630977 D TIGRFAM: pyrroline-5-carboxylate reductase; KEGG: sfx:S0330 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; pyrroline-5-carboxylate reductase 3630168..3630977 Escherichia coli KO11FL 11778151 YP_005279103.1 CDS EKO11_3463 NC_016902.1 3630994 3632109 R TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; MASE2 domain protein; KEGG: sbo:SBO_0280 diguanylate cyclase AdrA; SMART: GGDEF domain containing protein; diguanylate cyclase complement(3630994..3632109) Escherichia coli KO11FL 11778152 YP_005279104.1 CDS EKO11_3464 NC_016902.1 3632211 3632531 R PFAM: PsiF repeat-containing protein; KEGG: eoh:ECO103_0359 hypothetical protein; PsiF repeat-containing protein complement(3632211..3632531) Escherichia coli KO11FL 11778153 YP_005279105.1 CDS EKO11_3465 NC_016902.1 3632650 3634065 R PFAM: Alkaline phosphatase; KEGG: ebw:BWG_0267 alkaline phosphatase; SMART: Alkaline phosphatase; alkaline phosphatase complement(3632650..3634065) Escherichia coli KO11FL 11778154 YP_005279106.1 CDS EKO11_3466 NC_016902.1 3634166 3634426 R PFAM: Sigma-S stabilisation anti-adaptor protein; KEGG: ssn:SSON_0357 hypothetical protein; Sigma-S stabilization anti-adaptor protein complement(3634166..3634426) Escherichia coli KO11FL 11778155 YP_005279107.1 CDS EKO11_3467 NC_016902.1 3634889 3635983 D TIGRFAM: D-alanine/D-alanine ligase; KEGG: sfx:S0254 D-alanyl-alanine synthetase A; PFAM: D-alanine--D-alanine ligase domain protein; D-alanine--D-alanine ligase 3634889..3635983 Escherichia coli KO11FL 11778156 YP_005279108.1 CDS EKO11_3468 NC_016902.1 3636007 3636288 R manually curated; KEGG: sbc:SbBS512_E0297 hypothetical protein; hypothetical protein complement(3636007..3636288) Escherichia coli KO11FL 11778157 YP_005279109.1 CDS EKO11_3469 NC_016902.1 3636479 3636787 D KEGG: sbc:SbBS512_E0296 hypothetical protein; hypothetical protein 3636479..3636787 Escherichia coli KO11FL 11778158 YP_005279110.1 CDS EKO11_3470 NC_016902.1 3636846 3637940 R PFAM: protein of unknown function DUF1615; KEGG: sbo:SBO_0273 hypothetical protein; hypothetical protein complement(3636846..3637940) Escherichia coli KO11FL 11778159 YP_005279111.1 CDS EKO11_3471 NC_016902.1 3637953 3639173 R PFAM: SbmABacA family protein; KEGG: ebd:ECBD_3287 transport protein; SbmABacA family protein complement(3637953..3639173) Escherichia coli KO11FL 11778160 YP_005279112.1 CDS EKO11_3472 NC_016902.1 3639378 3639479 D KEGG: ebd:ECBD_3288 hypothetical protein; hypothetical protein 3639378..3639479 Escherichia coli KO11FL 11778161 YP_005279113.1 CDS EKO11_3473 NC_016902.1 3639525 3640682 D PFAM: beta-lactamase; KEGG: sbc:SbBS512_E0293 beta-lactam binding protein AmpH; beta-lactamase 3639525..3640682 Escherichia coli KO11FL 11778162 YP_005279114.1 CDS EKO11_3474 NC_016902.1 3640683 3641306 R KEGG: ssn:SSON_0350 putative DNA-binding transcriptional regulator; putative DNA-binding transcriptional regulator complement(3640683..3641306) Escherichia coli KO11FL 11779686 YP_005279115.1 CDS EKO11_3475 NC_016902.1 3641394 3644372 R TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: eok:G2583_0482 putative flagellin structural protein; SMART: Autotransporter beta- domain protein; outer membrane autotransporter barrel domain-containing protein complement(3641394..3644372) Escherichia coli KO11FL 11778163 YP_005279116.1 CDS EKO11_3476 NC_016902.1 3644894 3645868 D KEGG: sdy:SDY_0501 delta-aminolevulinic acid dehydratase; PFAM: delta-aminolevulinic acid dehydratase; porphobilinogen synthase 3644894..3645868 Escherichia coli KO11FL 11778164 YP_005279117.1 CDS EKO11_3477 NC_016902.1 3645975 3646826 R KEGG: eoh:ECO103_0347 taurine dioxygenase; PFAM: Taurine catabolism dioxygenase TauD/TfdA; taurine dioxygenase complement(3645975..3646826) Escherichia coli KO11FL 11779687 YP_005279118.1 CDS EKO11_3478 NC_016902.1 3646823 3647650 R PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sfv:SFV_0331 taurine transporter subunit; binding-protein-dependent transport system inner membrane protein complement(3646823..3647650) Escherichia coli KO11FL 11778165 YP_005279119.1 CDS EKO11_3479 NC_016902.1 3647647 3648414 R KEGG: ssn:SSON_0344 taurine transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(3647647..3648414) Escherichia coli KO11FL 11779688 YP_005279120.1 CDS EKO11_3480 NC_016902.1 3648427 3649389 R TIGRFAM: taurine ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: ebd:ECBD_3296 taurine transporter substrate binding subunit; SMART: extracellular solute-binding protein family 3; taurine ABC transporter substrate-binding protein complement(3648427..3649389) Escherichia coli KO11FL 11778166 YP_005279121.1 CDS EKO11_3481 NC_016902.1 3650005 3650676 D PFAM: LmbE family protein; KEGG: eoh:ECO103_0343 hypothetical protein; LmbE family protein 3650005..3650676 Escherichia coli KO11FL 11778167 YP_005279122.1 CDS EKO11_3482 NC_016902.1 3650686 3651882 D PFAM: glycosyl transferase family 2; KEGG: eoj:ECO26_0396 putative glucosyltransferase; family 2 glycosyl transferase 3650686..3651882 Escherichia coli KO11FL 11778168 YP_005279123.1 CDS EKO11_3483 NC_016902.1 3651749 3652441 D KEGG: eoh:ECO103_0341 putative transferase; manually curated; PFAM: transferase hexapeptide repeat containing protein; transferase hexapeptide repeat containing protein 3651749..3652441 Escherichia coli KO11FL 11778169 YP_005279124.1 CDS EKO11_3484 NC_016902.1 3652443 3653216 D KEGG: sbc:SbBS512_E0274 hypothetical protein; hypothetical protein 3652443..3653216 Escherichia coli KO11FL 11778170 YP_005279125.1 CDS EKO11_3485 NC_016902.1 3653401 3653676 D PFAM: protein of unknown function DUF156; KEGG: sbc:SbBS512_E0272 regulator protein FrmR; hypothetical protein 3653401..3653676 Escherichia coli KO11FL 11778171 YP_005279126.1 CDS EKO11_3486 NC_016902.1 3653711 3654820 D KEGG: sbc:SbBS512_E0271 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 3653711..3654820 Escherichia coli KO11FL 11778172 YP_005279127.1 CDS EKO11_3487 NC_016902.1 3654913 3655746 D TIGRFAM: S-formylglutathione hydrolase; KEGG: ssn:SSON_0334 putative esterase; PFAM: esterase; S-formylglutathione hydrolase 3654913..3655746 Escherichia coli KO11FL 11778173 YP_005279128.1 CDS EKO11_3488 NC_016902.1 3655972 3656511 R PFAM: Protein of unknown function DUF2058; KEGG: ebd:ECBD_3303 hypothetical protein; hypothetical protein complement(3655972..3656511) Escherichia coli KO11FL 11778174 YP_005279129.1 CDS EKO11_3489 NC_016902.1 3656613 3657824 R KEGG: eoj:ECO26_0389 putative 3-hydroxyphenylpropionic transporter MhpT; TIGRFAM: benzoate transport; PFAM: major facilitator superfamily MFS_1; benzoate transport complement(3656613..3657824) Escherichia coli KO11FL 11778175 YP_005279130.1 CDS EKO11_3490 NC_016902.1 3658000 3659013 R KEGG: eoh:ECO103_0334 4-hydroxy-2-ketovalerate aldolase; TIGRFAM: 4-hydroxy-2-oxovalerate aldolase; PFAM: pyruvate carboxyltransferase; DmpG communication domain protein; 4-hydroxy-2-oxovalerate aldolase complement(3658000..3659013) Escherichia coli KO11FL 11778176 YP_005279131.1 CDS EKO11_3491 NC_016902.1 3659010 3659960 R TIGRFAM: acetaldehyde dehydrogenase (acetylating); KEGG: ssn:SSON_0330 acetaldehyde dehydrogenase; PFAM: Acetaldehyde dehydrogenase ; Semialdehyde dehydrogenase NAD - binding; acetaldehyde dehydrogenase complement(3659010..3659960) Escherichia coli KO11FL 11778177 YP_005279132.1 CDS EKO11_3492 NC_016902.1 3659957 3660766 R KEGG: eoi:ECO111_0386 2-keto-4-pentenoate hydratase; PFAM: fumarylacetoacetate (FAA) hydrolase; 2-oxopent-4-enoate hydratase complement(3659957..3660766) Escherichia coli KO11FL 11778178 YP_005279133.1 CDS EKO11_3493 NC_016902.1 3660776 3661642 R PFAM: alpha/beta hydrolase fold; KEGG: ebd:ECBD_3308 alpha/beta hydrolase fold protein; alpha/beta hydrolase fold protein complement(3660776..3661642) Escherichia coli KO11FL 11778179 YP_005279134.1 CDS EKO11_3494 NC_016902.1 3661660 3662604 R PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: eoi:ECO111_0384 3-(2,3-dihydroxyphenyl)propionate dioxygenase; extradiol ring-cleavage dioxygenase class III protein subunit B complement(3661660..3662604) Escherichia coli KO11FL 11778180 YP_005279135.1 CDS EKO11_3495 NC_016902.1 3662606 3664270 R PFAM: monooxygenase FAD-binding; KEGG: eoi:ECO111_0383 3-(3-hydroxyphenyl)propionate hydroxylase; monooxygenase FAD-binding protein complement(3662606..3664270) Escherichia coli KO11FL 11778181 YP_005279136.1 CDS EKO11_3496 NC_016902.1 3664461 3665294 D KEGG: eok:G2583_0459 DNA-binding protein transcriptional activator, 3HPP-binding protein; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; IclR family transcriptional regulator 3664461..3665294 Escherichia coli KO11FL 11778182 YP_005279137.1 CDS EKO11_3497 NC_016902.1 3665362 3666453 D KEGG: ebd:ECBD_3312 lac repressor; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator 3665362..3666453 Escherichia coli KO11FL 11778183 YP_005279138.1 CDS EKO11_3498 NC_016902.1 3666576 3669650 D PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 42 domain 5 loop region; KEGG: ebd:ECBD_3313 beta-D-galactosidase; glycoside hydrolase family protein 3666576..3669650 Escherichia coli KO11FL 11778184 YP_005279139.1 CDS EKO11_3499 NC_016902.1 3669702 3670955 D TIGRFAM: oligosaccharide/H+ symporter, major facilitator superfamily (MFS); KEGG: ebd:ECBD_3314 galactoside permease; oligosaccharide/H+ symporter, major facilitator superfamily (MFS) 3669702..3670955 Escherichia coli KO11FL 11778185 YP_005279140.1 CDS EKO11_3500 NC_016902.1 3671012 3671632 D KEGG: eoh:ECO103_0324 galactoside O-acetyltransferase; galactoside O-acetyltransferase 3671012..3671632 Escherichia coli KO11FL 11779689 YP_005279141.1 CDS EKO11_3501 NC_016902.1 3671735 3672916 R KEGG: ebd:ECBD_3316 putative cyanate transporter; TIGRFAM: cyanate transporter; PFAM: major facilitator superfamily MFS_1; cyanate transporter complement(3671735..3672916) Escherichia coli KO11FL 11778186 YP_005279142.1 CDS EKO11_3502 NC_016902.1 3672922 3673392 R TIGRFAM: cyanate lyase; KEGG: eoh:ECO103_0322 cyanate hydratase; PFAM: Cyanate lyase domain protein; cyanate lyase complement(3672922..3673392) Escherichia coli KO11FL 11779690 YP_005279143.1 CDS EKO11_3503 NC_016902.1 3673423 3674082 R KEGG: ebd:ECBD_3318 carbonate dehydratase; PFAM: carbonic anhydrase; carbonate dehydratase complement(3673423..3674082) Escherichia coli KO11FL 11778187 YP_005279144.1 CDS EKO11_3504 NC_016902.1 3674192 3675091 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eoi:ECO111_0375 DNA-binding transcriptional regulator CynR; LysR family transcriptional regulator 3674192..3675091 Escherichia coli KO11FL 11778188 YP_005279145.1 CDS EKO11_3505 NC_016902.1 3675131 3676414 R KEGG: eoh:ECO103_0319 cytosine deaminase; PFAM: Amidohydrolase 3; cytosine deaminase complement(3675131..3676414) Escherichia coli KO11FL 11779691 YP_005279146.1 CDS EKO11_3506 NC_016902.1 3676404 3677663 R KEGG: ebd:ECBD_3321 cytosine permease; TIGRFAM: NCS1 nucleoside transporter family; PFAM: permease for cytosine/purines uracil thiamine allantoin; NCS1 nucleoside transporter family complement(3676404..3677663) Escherichia coli KO11FL 11778189 YP_005279147.1 CDS EKO11_3507 NC_016902.1 3677900 3679786 R KEGG: eoh:ECO103_0317 propionyl-CoA synthetase; TIGRFAM: propionate/CoA ligase; PFAM: AMP-dependent synthetase and ligase; propionate/CoA ligase complement(3677900..3679786) Escherichia coli KO11FL 11778190 YP_005279148.1 CDS EKO11_3508 NC_016902.1 3679826 3681277 R TIGRFAM: 2-methylcitrate dehydratase; KEGG: eoh:ECO103_0316 2-methylcitrate dehydratase; PFAM: MmgE/PrpD family protein; 2-methylcitrate dehydratase complement(3679826..3681277) Escherichia coli KO11FL 11778191 YP_005279149.1 CDS EKO11_3509 NC_016902.1 3681311 3682480 R TIGRFAM: 2-methylcitrate synthase/citrate synthase II; KEGG: ebd:ECBD_3324 methylcitrate synthase; PFAM: Citrate synthase; 2-methylcitrate synthase/citrate synthase II complement(3681311..3682480) Escherichia coli KO11FL 11778192 YP_005279150.1 CDS EKO11_3510 NC_016902.1 3682525 3683415 R KEGG: eoh:ECO103_0314 2-methylisocitrate lyase; TIGRFAM: methylisocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; methylisocitrate lyase complement(3682525..3683415) Escherichia coli KO11FL 11778193 YP_005279151.1 CDS EKO11_3511 NC_016902.1 3683654 3685240 D TIGRFAM: propionate catabolism operon regulatory protein PrpR; PFAM: sigma-54 factor interaction domain-containing protein; Propionate catabolism activator domain-containing protein; helix-turn-helix Fis-type; KEGG: eoh:ECO103_0313 DNA-binding transcriptional activator PrpR; SMART: AAA ATPase; Fis family proprionate catabolism activator 3683654..3685240 Escherichia coli KO11FL 11778194 YP_005279152.1 CDS EKO11_3512 NC_016902.1 3685341 3685616 R PFAM: protein of unknown function DUF1471; KEGG: eok:G2583_0440 hypothetical protein; hypothetical protein complement(3685341..3685616) Escherichia coli KO11FL 11778195 YP_005279153.1 CDS EKO11_3513 NC_016902.1 3685763 3686434 D manually curated; TIGRFAM: homoserine/threonine efflux pump; KEGG: ebr:ECB_00283 neutral amino-acid efflux system; PFAM: Lysine exporter protein (LYSE/YGGA); homoserine/threonine efflux pump 3685763..3686434 Escherichia coli KO11FL 11778196 YP_005279154.1 CDS EKO11_3514 NC_016902.1 3687109 3687924 R KEGG: eoi:ECO111_0365 hypothetical protein; hypothetical protein complement(3687109..3687924) Escherichia coli KO11FL 11778198 YP_005279155.1 CDS EKO11_3515 NC_016902.1 3688167 3689216 R PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ebd:ECBD_3332 alcohol dehydrogenase zinc-binding domain protein; alcohol dehydrogenase complement(3688167..3689216) Escherichia coli KO11FL 11778199 YP_005279156.1 CDS EKO11_3516 NC_016902.1 3689303 3690259 R PFAM: inner-membrane translocator; KEGG: eok:G2583_0434 putative permease of transport system; inner-membrane translocator complement(3689303..3690259) Escherichia coli KO11FL 11778200 YP_005279157.1 CDS EKO11_3517 NC_016902.1 3690256 3691227 R PFAM: inner-membrane translocator; KEGG: eok:G2583_0433 putative permease of transport system probably ribose specific; inner-membrane translocator complement(3690256..3691227) Escherichia coli KO11FL 11778201 YP_005279158.1 CDS EKO11_3518 NC_016902.1 3691220 3692704 R KEGG: eoh:ECO103_0304 putative ATP-binding component of sugar ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(3691220..3692704) Escherichia coli KO11FL 11778202 YP_005279159.1 CDS EKO11_3519 NC_016902.1 3692753 3693739 R KEGG: eoh:ECO103_0303 putative sugar-binding protein; putative sugar-binding protein complement(3692753..3693739) Escherichia coli KO11FL 11778203 YP_005279160.1 CDS EKO11_3520 NC_016902.1 3693990 3694400 R PFAM: protein of unknown function DUF437; KEGG: eoh:ECO103_0302 hypothetical protein; hypothetical protein complement(3693990..3694400) Escherichia coli KO11FL 11779692 YP_005279161.1 CDS EKO11_3521 NC_016902.1 3694699 3696081 R PFAM: Amidohydrolase 3; KEGG: eoi:ECO111_0358 putative deaminase; amidohydrolase complement(3694699..3696081) Escherichia coli KO11FL 11778204 YP_005279162.1 CDS EKO11_3522 NC_016902.1 3696091 3697041 R KEGG: eoh:ECO103_0300 putative carbamate kinase; PFAM: aspartate/glutamate/uridylate kinase; Carbamate kinase complement(3696091..3697041) Escherichia coli KO11FL 11778205 YP_005279163.1 CDS EKO11_3523 NC_016902.1 3697184 3698602 R PFAM: protein of unknown function DUF1116; KEGG: eoh:ECO103_0299 hypothetical protein; hypothetical protein complement(3697184..3698602) Escherichia coli KO11FL 11778206 YP_005279164.1 CDS EKO11_3524 NC_016902.1 3698602 3700149 R KEGG: eoh:ECO103_0298 putative acyl-CoA synthetase; putative acyl-CoA synthetase complement(3698602..3700149) Escherichia coli KO11FL 11778207 YP_005279165.1 CDS EKO11_3525 NC_016902.1 3700139 3701002 R KEGG: eoj:ECO26_0354 hypothetical protein; hypothetical protein complement(3700139..3701002) Escherichia coli KO11FL 11778208 YP_005279166.1 CDS EKO11_3526 NC_016902.1 3701042 3701647 R KEGG: ebd:ECBD_3339 ankyrin; ankyrin complement(3701042..3701647) Escherichia coli KO11FL 11778209 YP_005279167.1 CDS EKO11_3527 NC_016902.1 3701905 3702402 D PFAM: protein of unknown function DUF1097; KEGG: ebd:ECBD_3340 protein of unknown function DUF1097; hypothetical protein 3701905..3702402 Escherichia coli KO11FL 11778210 YP_005279168.1 CDS EKO11_3528 NC_016902.1 3702494 3703426 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebd:ECBD_3341 transcriptional regulator, LysR family; LysR family transcriptional regulator 3702494..3703426 Escherichia coli KO11FL 11778211 YP_005279169.1 CDS EKO11_3529 NC_016902.1 3703468 3704556 R KEGG: eoh:ECO103_0293 putative DNA-binding transcriptional regulator; PFAM: EAL domain protein; regulatory protein LuxR; SMART: EAL domain protein; regulatory protein LuxR; diguanylate phosphodiesterase complement(3703468..3704556) Escherichia coli KO11FL 11778212 YP_005279170.1 CDS EKO11_3530 NC_016902.1 3704698 3708747 R manually curated; TIGRFAM: outer membrane autotransporter barrel domain protein; KEGG: eok:G2583_0419 AidA-I adhesin-like protein; PFAM: Autotransporter beta- domain protein; Pertactin; outer membrane autotransporter barrel domain-containing protein complement(3704698..3708747) Escherichia coli KO11FL 11778213 YP_005279171.1 CDS EKO11_3531 NC_016902.1 3709254 3711287 R KEGG: ebd:ECBD_3344 choline transport protein BetT; TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; choline/carnitine/betaine transporter complement(3709254..3711287) Escherichia coli KO11FL 11778214 YP_005279172.1 CDS EKO11_3532 NC_016902.1 3711416 3712003 D KEGG: sfv:SFV_0324 transcriptional regulator BetI; TIGRFAM: transcriptional repressor BetI; PFAM: regulatory protein TetR; TetR family transcriptional regulator 3711416..3712003 Escherichia coli KO11FL 11778215 YP_005279173.1 CDS EKO11_3533 NC_016902.1 3712017 3713489 D KEGG: ebd:ECBD_3346 betaine aldehyde dehydrogenase; TIGRFAM: betaine aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; betaine aldehyde dehydrogenase 3712017..3713489 Escherichia coli KO11FL 11778216 YP_005279174.1 CDS EKO11_3534 NC_016902.1 3713503 3715173 D KEGG: eoh:ECO103_0288 choline dehydrogenase; TIGRFAM: choline dehydrogenase; PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; choline dehydrogenase 3713503..3715173 Escherichia coli KO11FL 11778217 YP_005279175.1 CDS EKO11_3535 NC_016902.1 3715386 3716054 D PFAM: lipopolysaccharide biosynthesis protein; KEGG: eoi:ECO111_0344 putative inner membrane protein; lipopolysaccharide biosynthesis protein 3715386..3716054 Escherichia coli KO11FL 11778218 YP_005279176.1 CDS EKO11_3536 NC_016902.1 3716297 3716992 R PFAM: protein of unknown function DUF162; KEGG: sfv:SFV_0319 putative transporter; hypothetical protein complement(3716297..3716992) Escherichia coli KO11FL 11778219 YP_005279177.1 CDS EKO11_3537 NC_016902.1 3716985 3718412 R KEGG: ssn:SSON_0317 hypothetical protein; TIGRFAM: iron-sulfur cluster binding protein; PFAM: protein of unknown function DUF162; iron-sulfur cluster binding protein complement(3716985..3718412) Escherichia coli KO11FL 11778220 YP_005279178.1 CDS EKO11_3538 NC_016902.1 3718423 3719142 R PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: ssn:SSON_0318 putative dehydrogenase subunit; hypothetical protein complement(3718423..3719142) Escherichia coli KO11FL 11778221 YP_005279179.1 CDS EKO11_3539 NC_016902.1 3719659 3720513 R KEGG: eoh:ECO103_0281 putative DNA-binding transcriptional regulator, AraC-type; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(3719659..3720513) Escherichia coli KO11FL 11778222 YP_005279180.1 CDS EKO11_3540 NC_016902.1 3720739 3722064 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: ssn:SSON_0320 pyridine nucleotide-disulfide oxidoreductase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 3720739..3722064 Escherichia coli KO11FL 11778223 YP_005279181.1 CDS EKO11_3541 NC_016902.1 3722173 3722409 D KEGG: ebd:ECBD_3355 protein of unknown function DUF1471; manually curated; PFAM: protein of unknown function DUF1471; hypothetical protein 3722173..3722409 Escherichia coli KO11FL 11779693 YP_005279182.1 CDS EKO11_3542 NC_016902.1 3722421 3723014 D PFAM: protein of unknown function DUF417; KEGG: ebd:ECBD_3356 protein of unknown function DUF417; hypothetical protein 3722421..3723014 Escherichia coli KO11FL 11778224 YP_005279183.1 CDS EKO11_3543 NC_016902.1 3723174 3724043 R PFAM: aldo/keto reductase; KEGG: sbc:SbBS512_E0266 oxidoreductase, aldo/keto reductase family; aldo/keto reductase complement(3723174..3724043) Escherichia coli KO11FL 11778225 YP_005279184.1 CDS EKO11_3544 NC_016902.1 3724292 3725149 D KEGG: eok:G2583_0398 putative AraC-like transcriptional regulator; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 3724292..3725149 Escherichia coli KO11FL 11778226 YP_005279185.1 CDS EKO11_3545 NC_016902.1 3725270 3729523 R KEGG: eoh:ECO103_0275 putative invasin; PFAM: Ig domain protein group 1 domain protein; SMART: Ig domain protein group 1 domain protein; Ig domain-containing protein group 1 domain-containing protein complement(3725270..3729523) Escherichia coli KO11FL 11778227 YP_005279186.1 CDS EKO11_3547 NC_016902.1 3730395 3730514 D hypothetical protein 3730395..3730514 Escherichia coli KO11FL 11778228 YP_005279187.1 CDS EKO11_3548 NC_016902.1 3730639 3730740 D KEGG: ebd:ECBD_3359 hypothetical protein; hypothetical protein 3730639..3730740 Escherichia coli KO11FL 11778229 YP_005279188.1 CDS EKO11_3549 NC_016902.1 3731100 3731366 D KEGG: ebd:ECBD_3360 50S ribosomal protein L31 type B; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; 50S ribosomal protein L31 3731100..3731366 Escherichia coli KO11FL 11778230 YP_005279189.1 CDS EKO11_3550 NC_016902.1 3731366 3731506 D KEGG: ebd:ECBD_3361 50S ribosomal protein L36; TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36; 50S ribosomal protein L36 3731366..3731506 Escherichia coli KO11FL 11779695 YP_005279190.1 CDS EKO11_3551 NC_016902.1 3732591 3733133 D KEGG: sbo:SBO_0225 putative regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; regulatory protein LuxR 3732591..3733133 Escherichia coli KO11FL 11778231 YP_005279191.1 CDS EKO11_3552 NC_016902.1 3733208 3733795 D KEGG: eok:G2583_0385 hypothetical protein; hypothetical protein 3733208..3733795 Escherichia coli KO11FL 11778232 YP_005279192.1 CDS EKO11_3553 NC_016902.1 3733853 3734521 D KEGG: sbo:SBO_0227 hypothetical protein; hypothetical protein 3733853..3734521 Escherichia coli KO11FL 11778233 YP_005279193.1 CDS EKO11_3554 NC_016902.1 3734547 3737072 D KEGG: eoj:ECO26_0326 putative outer membrane usher protein; putative outer membrane usher protein 3734547..3737072 Escherichia coli KO11FL 11778234 YP_005279194.1 CDS EKO11_3555 NC_016902.1 3737062 3738705 D KEGG: eoj:ECO26_0325 hypothetical protein; hypothetical protein 3737062..3738705 Escherichia coli KO11FL 11778235 YP_005279195.1 CDS EKO11_3556 NC_016902.1 3738674 3739384 D KEGG: eoj:ECO26_0324 putative chaperone; putative chaperone 3738674..3739384 Escherichia coli KO11FL 11779696 YP_005279196.1 CDS EKO11_3557 NC_016902.1 3739697 3740026 D KEGG: ebd:ECBD_3369 protein of unknown function UPF0153; manually curated; PFAM: protein of unknown function UPF0153; hypothetical protein 3739697..3740026 Escherichia coli KO11FL 11778236 YP_005279197.1 CDS EKO11_3559 NC_016902.1 3741304 3741993 D PFAM: [2Fe-2S]-binding domain-containing protein; ferredoxin; KEGG: ebd:ECBD_3371 putative xanthine dehydrogenase iron-sulfur-binding subunit; (2Fe-2S)-binding domain-containing protein 3741304..3741993 Escherichia coli KO11FL 11778238 YP_005279198.1 CDS EKO11_3560 NC_016902.1 3741990 3742946 D PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: eoh:ECO103_0262 putative oxidoreductase; molybdopterin dehydrogenase FAD-binding protein 3741990..3742946 Escherichia coli KO11FL 11778239 YP_005279199.1 CDS EKO11_3561 NC_016902.1 3742943 3745141 D PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: eoh:ECO103_0261 putative oxidoreductase; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein 3742943..3745141 Escherichia coli KO11FL 11779697 YP_005279200.1 CDS EKO11_3562 NC_016902.1 3745151 3746107 D PFAM: protein of unknown function DUF182; KEGG: eoh:ECO103_0260 hypothetical protein; hypothetical protein 3745151..3746107 Escherichia coli KO11FL 11778240 YP_005279201.1 CDS EKO11_3563 NC_016902.1 3746086 3746496 D PFAM: LysR substrate-binding; KEGG: eoh:ECO103_0259 putative transcriptional regulator LysR-type; LysR substrate-binding protein 3746086..3746496 Escherichia coli KO11FL 11778241 YP_005279202.1 CDS EKO11_3564 NC_016902.1 3746813 3748066 R TIGRFAM: gamma-glutamyl phosphate reductase; KEGG: eoh:ECO103_0258 gamma-glutamyl phosphate reductase; PFAM: Aldehyde Dehydrogenase; gamma-glutamyl phosphate reductase complement(3746813..3748066) Escherichia coli KO11FL 11779698 YP_005279203.1 CDS EKO11_3565 NC_016902.1 3748078 3749181 R TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; KEGG: sdy:SDY_0474 gamma-glutamyl kinase; SMART: PUA domain containing protein; glutamate 5-kinase complement(3748078..3749181) Escherichia coli KO11FL 11778243 YP_005279204.1 CDS EKO11_3566 NC_016902.1 3749469 3750524 D PFAM: porin Gram-negative type; KEGG: eok:G2583_0277 outer membrane protein (porin); porin 3749469..3750524 Escherichia coli KO11FL 11778244 YP_005279205.1 CDS EKO11_3567 NC_016902.1 3750563 3750964 R PFAM: transcriptional regulator Crl; KEGG: sbc:SbBS512_E0237 DNA-binding transcriptional regulator Crl; transcriptional regulator Crl complement(3750563..3750964) Escherichia coli KO11FL 11778245 YP_005279206.1 CDS EKO11_3568 NC_016902.1 3751022 3752266 R KEGG: eoh:ECO103_0254 fermentation/respiration switch protein; fermentation/respiration switch protein complement(3751022..3752266) Escherichia coli KO11FL 11778246 YP_005279207.1 CDS EKO11_3569 NC_016902.1 3752358 3752816 R KEGG: sdy:SDY_0479 xanthine-guanine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; xanthine phosphoribosyltransferase complement(3752358..3752816) Escherichia coli KO11FL 11779699 YP_005279208.1 CDS EKO11_3570 NC_016902.1 3753077 3754534 D TIGRFAM: aminoacyl-histidine dipeptidase; KEGG: eoi:ECO111_0299 aminoacyl-histidine dipeptidase; PFAM: peptidase dimerisation domain protein; peptidase M20; aminoacyl-histidine dipeptidase 3753077..3754534 Escherichia coli KO11FL 11778247 YP_005279209.1 CDS EKO11_3571 NC_016902.1 3754591 3755205 R KEGG: sbc:SbBS512_E0233 peptide chain release factor-like protein; TIGRFAM: peptide chain release factor H; PFAM: Class I peptide chain release factor; peptide chain release factor H complement(3754591..3755205) Escherichia coli KO11FL 11778248 YP_005279210.1 CDS EKO11_3572 NC_016902.1 3755202 3756341 R KEGG: eoh:ECO103_0250 hypothetical protein; TIGRFAM: release factor H-coupled RctB family protein; PFAM: protein of unknown function UPF0027; release factor H-coupled RctB family protein complement(3755202..3756341) Escherichia coli KO11FL 11778249 YP_005279211.1 CDS EKO11_3573 NC_016902.1 3756587 3757039 R KEGG: sbc:SbBS512_E0229 hypothetical protein; manually curated; PFAM: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 complement(3756587..3757039) Escherichia coli KO11FL 11778250 YP_005279212.1 CDS EKO11_3574 NC_016902.1 3757036 3758091 R KEGG: eoh:ECO103_0248 DNA polymerase IV; PFAM: UMUC domain protein DNA-repair protein; DNA-directed DNA polymerase complement(3757036..3758091) Escherichia coli KO11FL 11778251 YP_005279213.1 CDS EKO11_3575 NC_016902.1 3758162 3759085 R PFAM: OmpA/MotB domain protein; KEGG: eoi:ECO111_0294 hypothetical protein; OmpA/MotB domain-containing protein complement(3758162..3759085) Escherichia coli KO11FL 11778252 YP_005279214.1 CDS EKO11_3576 NC_016902.1 3759088 3759951 R PFAM: MotA/TolQ/ExbB proton channel; KEGG: eoj:ECO26_0287 flagellar motor protein MotA; MotA/TolQ/ExbB proton channel complement(3759088..3759951) Escherichia coli KO11FL 11778253 YP_005279215.1 CDS EKO11_3577 NC_016902.1 3759964 3760680 R KEGG: eoj:ECO26_0286 flagellar biosynthesis sigma factor; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; RNA polymerase sigma 28 subunit FliA/WhiG complement(3759964..3760680) Escherichia coli KO11FL 11778254 YP_005279216.1 CDS EKO11_3578 NC_016902.1 3760700 3761167 R PFAM: flagellar basal body-associated protein FliL; KEGG: eoi:ECO111_0291 putative lateral flagellar biogenesis protein; flagellar basal body-associated protein FliL complement(3760700..3761167) Escherichia coli KO11FL 11778255 YP_005279217.1 CDS EKO11_3579 NC_016902.1 3761175 3762236 R PFAM: Flagellar hook-length control protein-like, C-terminal domain; KEGG: eoj:ECO26_0284 putative lateral flagellar hook-length control protein; flagellar hook-length control protein-like protein complement(3761175..3762236) Escherichia coli KO11FL 11778256 YP_005279218.1 CDS EKO11_3580 NC_016902.1 3762233 3762544 R KEGG: eoi:ECO111_0289 putative lateral flagellar chaperone protein; putative lateral flagellar chaperone protein complement(3762233..3762544) Escherichia coli KO11FL 11778257 YP_005279219.1 CDS EKO11_3581 NC_016902.1 3762549 3762941 R KEGG: eoi:ECO111_0288 putative lateral flagellar protein, potentiates polymerization; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS; flagellar protein FliS complement(3762549..3762941) Escherichia coli KO11FL 11778258 YP_005279220.1 CDS EKO11_3582 NC_016902.1 3762964 3764280 R PFAM: flagellar hook-associated 2 domain-containing protein; flagellar hook-associated protein 2 domain-containing protein; KEGG: eoi:ECO111_0287 putative lateral flagellar filament capping protein; flagellar hook-associated 2 domain-containing protein complement(3762964..3764280) Escherichia coli KO11FL 11778259 YP_005279221.1 CDS EKO11_3583 NC_016902.1 3764487 3765401 R PFAM: flagellin domain protein; KEGG: eoi:ECO111_0286 putative lateral flagellin; flagellin domain-containing protein complement(3764487..3765401) Escherichia coli KO11FL 11778260 YP_005279222.1 CDS EKO11_3584 NC_016902.1 3765887 3766729 D PFAM: transcriptional regulator domain-containing protein; KEGG: eoi:ECO111_0285 putative lateral flagellar putative transmembrane regulator; transcriptional regulator CadC 3765887..3766729 Escherichia coli KO11FL 11778261 YP_005279223.1 CDS EKO11_3585 NC_016902.1 3766788 3767765 R KEGG: eoj:ECO26_0278 putative lateral flagellar hook associated protein; putative lateral flagellar hook associated protein complement(3766788..3767765) Escherichia coli KO11FL 11778262 YP_005279224.1 CDS EKO11_3586 NC_016902.1 3767782 3768711 R KEGG: eoi:ECO111_0283 putative lateral flagellar hook-filament junction protein; TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; flagellar hook-associated protein 3 complement(3767782..3768711) Escherichia coli KO11FL 11779700 YP_005279225.1 CDS EKO11_3587 NC_016902.1 3768726 3770102 R KEGG: eoj:ECO26_0276 putative lateral flagellar hook-filament junction protein; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; flagellar hook-associated protein FlgK complement(3768726..3770102) Escherichia coli KO11FL 11778263 YP_005279226.1 CDS EKO11_3588 NC_016902.1 3770285 3770584 R PFAM: Flagellar protein FlgJ-like; KEGG: eoi:ECO111_0280 putative lateral flagellar peptidoglycan hydrolase; Flagellar protein FlgJ-like protein complement(3770285..3770584) Escherichia coli KO11FL 11778264 YP_005279227.1 CDS EKO11_3589 NC_016902.1 3770584 3771684 R PFAM: flagellar P-ring protein; KEGG: eoi:ECO111_0279 flagellar basal body P-ring protein; flagellar P-ring protein complement(3770584..3771684) Escherichia coli KO11FL 11779701 YP_005279228.1 CDS EKO11_3590 NC_016902.1 3771699 3772442 R PFAM: flagellar L-ring protein; KEGG: eoi:ECO111_0278 flagellar basal body L-ring protein; flagellar L-ring protein complement(3771699..3772442) Escherichia coli KO11FL 11778265 YP_005279229.1 CDS EKO11_3591 NC_016902.1 3772636 3773421 R KEGG: eoj:ECO26_0272 flagellar basal body rod protein FlgG; TIGRFAM: flagellar basal-body rod protein FlgG; fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; flagellar basal-body rod protein FlgG complement(3772636..3773421) Escherichia coli KO11FL 11778266 YP_005279230.1 CDS EKO11_3592 NC_016902.1 3773500 3774237 R KEGG: eoi:ECO111_0276 flagellar basal body rod protein FlgF; TIGRFAM: fagellar hook-basal body protein; PFAM: flagellar basal body rod protein; fagellar hook-basal body protein complement(3773500..3774237) Escherichia coli KO11FL 11778267 YP_005279231.1 CDS EKO11_3593 NC_016902.1 3774237 3775439 R KEGG: eoi:ECO111_0275 putative lateral flagellar hook protein; TIGRFAM: fagellar hook-basal body protein; PFAM: flagellar basal body FlaE domain protein; flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; fagellar hook-basal body protein complement(3774237..3775439) Escherichia coli KO11FL 11778268 YP_005279232.1 CDS EKO11_3594 NC_016902.1 3775524 3776237 R PFAM: flagellar hook capping protein; KEGG: eoi:ECO111_0274 putative lateral flagellar hook assembly protein; flagellar hook capping protein complement(3775524..3776237) Escherichia coli KO11FL 11778269 YP_005279233.1 CDS EKO11_3595 NC_016902.1 3776237 3776668 R KEGG: eoi:ECO111_0273 flagellar basal body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal-body rod protein FlgC complement(3776237..3776668) Escherichia coli KO11FL 11778270 YP_005279234.1 CDS EKO11_3596 NC_016902.1 3776671 3777006 R TIGRFAM: flagellar basal-body rod protein FlgB; KEGG: eoi:ECO111_0272 putative lateral flagellar rod protein; flagellar basal-body rod protein FlgB complement(3776671..3777006) Escherichia coli KO11FL 11778271 YP_005279235.1 CDS EKO11_3597 NC_016902.1 3777088 3777825 D TIGRFAM: flagella basal body P-ring formation protein FlgA; KEGG: eoi:ECO111_0271 putative lateral flagellar P-ring addition protein; flagella basal body P-ring formation protein FlgA 3777088..3777825 Escherichia coli KO11FL 11778272 YP_005279236.1 CDS EKO11_3598 NC_016902.1 3777906 3778184 D KEGG: eoi:ECO111_0270 putative lateral flagellar anti-sigma factor 28 protein; TIGRFAM: Anti-sigma-28 factor FlgM family protein; PFAM: Anti-sigma-28 factor FlgM family protein; anti-sigma-28 factor FlgM family protein 3777906..3778184 Escherichia coli KO11FL 11778273 YP_005279237.1 CDS EKO11_3599 NC_016902.1 3778197 3778625 D PFAM: FlgN family protein; KEGG: eoi:ECO111_0269 putative lateral flagellar chaperone protein; FlgN family protein 3778197..3778625 Escherichia coli KO11FL 11778274 YP_005279238.1 CDS EKO11_3600 NC_016902.1 3778752 3779681 D KEGG: eoi:ECO111_0268 putative lateral flagellar associated protein; putative lateral flagellar associated protein 3778752..3779681 Escherichia coli KO11FL 11778275 YP_005279239.1 CDS EKO11_3601 NC_016902.1 3779860 3782304 D PFAM: glycosyl transferase family 2; KEGG: eoi:ECO111_0267 putative glycosyltransferase; family 2 glycosyl transferase 3779860..3782304 Escherichia coli KO11FL 11778276 YP_005279240.1 CDS EKO11_3602 NC_016902.1 3782726 3783316 R PFAM: MuA-transposase/repressor protein CI DNA-binding; KEGG: ebw:BWG_3689 repressor protein CI; MuA-transposase/repressor protein CI DNA-binding protein complement(3782726..3783316) Escherichia coli KO11FL 11778277 YP_005279241.1 CDS EKO11_3603 NC_016902.1 3783486 3783713 D KEGG: pay:PAU_01004 putative phage transcriptional regulator; putative transcriptional regulator, Nlp 3783486..3783713 Escherichia coli KO11FL 11778278 YP_005279242.1 CDS EKO11_3604 NC_016902.1 3783715 3785706 D PFAM: Mu transposase; Transposase-like Mu ; MuA-transposase/repressor protein CI DNA-binding; KEGG: sfv:SFV_0707 putative phage transposase; Mu transposase 3783715..3785706 Escherichia coli KO11FL 11778279 YP_005279243.1 CDS EKO11_3605 NC_016902.1 3785745 3786683 D PFAM: B transposition protein domain protein; ATPase associated with various cellular activities AAA_5; KEGG: xne:XNC1_3358 DNA transposition protein; B transposition protein domain protein 3785745..3786683 Escherichia coli KO11FL 11778280 YP_005279244.1 CDS EKO11_3606 NC_016902.1 3786699 3786926 D KEGG: acp:A2cp1_0644 FkbM family methyltransferase; hypothetical protein 3786699..3786926 Escherichia coli KO11FL 11778281 YP_005279245.1 CDS EKO11_3607 NC_016902.1 3786929 3787159 D KEGG: glo:Glov_1237 acetyl-CoA carboxylase, carboxyl transferase, beta subunit; hypothetical protein 3786929..3787159 Escherichia coli KO11FL 11778282 YP_005279246.1 CDS EKO11_3608 NC_016902.1 3787171 3787434 D KEGG: bdu:BDU_4026 vlp protein, gamma subfamily; vlp protein, gamma subfamily 3787171..3787434 Escherichia coli KO11FL 11778283 YP_005279247.1 CDS EKO11_3609 NC_016902.1 3787449 3787868 D KEGG: bth:BT_0327 glutamine ABC transporter, periplasmic glutamine-binding protein (GlnH); hypothetical protein 3787449..3787868 Escherichia coli KO11FL 11778284 YP_005279248.1 CDS EKO11_3610 NC_016902.1 3787869 3788168 D KEGG: ypb:YPTS_3265 phage-like protein; phage-like protein 3787869..3788168 Escherichia coli KO11FL 11778285 YP_005279249.1 CDS EKO11_3611 NC_016902.1 3788188 3788712 D KEGG: pag:PLES_15581 COG4396: Mu-like prophage host-nuclease inhibitor protein Gam; hypothetical protein 3788188..3788712 Escherichia coli KO11FL 11778286 YP_005279250.1 CDS EKO11_3612 NC_016902.1 3788811 3789341 D KEGG: cro:ROD_47011 putative prophage DNA binding protein; putative prophage DNA binding protein 3788811..3789341 Escherichia coli KO11FL 11778287 YP_005279251.1 CDS EKO11_3613 NC_016902.1 3789341 3789871 D KEGG: cro:ROD_47021 hypothetical protein; hypothetical protein 3789341..3789871 Escherichia coli KO11FL 11778288 YP_005279252.1 CDS EKO11_3614 NC_016902.1 3789858 3790040 D KEGG: cro:ROD_47051 hypothetical protein; hypothetical protein 3789858..3790040 Escherichia coli KO11FL 11778289 YP_005279253.1 CDS EKO11_3615 NC_016902.1 3790042 3790344 D KEGG: cro:ROD_47061 hypothetical protein; hypothetical protein 3790042..3790344 Escherichia coli KO11FL 11778290 YP_005279254.1 CDS EKO11_3616 NC_016902.1 3790283 3790549 R KEGG: gau:GAU_2969 putative serine/threonine protein kinase; hypothetical protein complement(3790283..3790549) Escherichia coli KO11FL 11778291 YP_005279255.1 CDS EKO11_3617 NC_016902.1 3790620 3791171 D KEGG: xne:XNC1_3365 hypothetical protein; hypothetical protein 3790620..3791171 Escherichia coli KO11FL 11778292 YP_005279256.1 CDS EKO11_3618 NC_016902.1 3791168 3791557 D PFAM: Mor transcription activator domain protein; KEGG: vco:VC0395_A0772 positive regulator of late transcription; Mor transcription activator domain-containing protein 3791168..3791557 Escherichia coli KO11FL 11778293 YP_005279257.1 CDS EKO11_3619 NC_016902.1 3791635 3791853 D KEGG: son:SO_2672 hypothetical protein; hypothetical protein 3791635..3791853 Escherichia coli KO11FL 11779702 YP_005279258.1 CDS EKO11_3620 NC_016902.1 3791846 3792208 D KEGG: aau:AAur_2862 hypothetical protein; hypothetical protein 3791846..3792208 Escherichia coli KO11FL 11778294 YP_005279259.1 CDS EKO11_3621 NC_016902.1 3792218 3792337 D hypothetical protein 3792218..3792337 Escherichia coli KO11FL 11778295 YP_005279260.1 CDS EKO11_3622 NC_016902.1 3792350 3792772 D PFAM: Mor transcription activator domain protein; KEGG: tau:Tola_0729 Mor transcription activator domain protein; Mor transcription activator domain-containing protein 3792350..3792772 Escherichia coli KO11FL 11779703 YP_005279261.1 CDS EKO11_3623 NC_016902.1 3792867 3793382 D KEGG: yps:YPTB1805 endolysin (lysis protein) (lysozyme); PFAM: glycoside hydrolase family 24; lysozyme 3792867..3793382 Escherichia coli KO11FL 11778296 YP_005279262.1 CDS EKO11_3624 NC_016902.1 3793366 3793752 D KEGG: sed:SeD_A2275 putative Rz lytic protein; putative Rz lytic protein 3793366..3793752 Escherichia coli KO11FL 11778297 YP_005279263.1 CDS EKO11_3625 NC_016902.1 3793733 3793954 D manually curated; KEGG: kpe:KPK_4147 hypothetical protein; hypothetical protein 3793733..3793954 Escherichia coli KO11FL 11778298 YP_005279264.1 CDS EKO11_3626 NC_016902.1 3793911 3794105 D KEGG: htu:Htur_4338 hypothetical protein; hypothetical protein 3793911..3794105 Escherichia coli KO11FL 11778299 YP_005279265.1 CDS EKO11_3627 NC_016902.1 3794105 3794404 D KEGG: cro:ROD_47131 putative prophage membrane protein; putative prophage membrane protein 3794105..3794404 Escherichia coli KO11FL 11778300 YP_005279266.1 CDS EKO11_3628 NC_016902.1 3794401 3794691 D KEGG: tau:Tola_0736 hypothetical protein; hypothetical protein 3794401..3794691 Escherichia coli KO11FL 11778301 YP_005279267.1 CDS EKO11_3629 NC_016902.1 3794703 3795278 D KEGG: tau:Tola_0737 hypothetical protein; hypothetical protein 3794703..3795278 Escherichia coli KO11FL 11778302 YP_005279268.1 CDS EKO11_3630 NC_016902.1 3795286 3796941 D KEGG: cro:ROD_47161 putative terminase large subunit; putative terminase large subunit 3795286..3796941 Escherichia coli KO11FL 11778303 YP_005279269.1 CDS EKO11_3631 NC_016902.1 3796941 3798479 D PFAM: protein of unknown function DUF935; KEGG: cro:ROD_47171 putative phage portal protein; hypothetical protein 3796941..3798479 Escherichia coli KO11FL 11778304 YP_005279270.1 CDS EKO11_3632 NC_016902.1 3798460 3799779 D KEGG: cro:ROD_47181 putative phage head assembly protein; TIGRFAM: phage head morphogenesis protein, SPP1 gp7 family; PFAM: head morphogenesis protein SPP1 gp7; phage head morphogenesis protein 3798460..3799779 Escherichia coli KO11FL 11778305 YP_005279271.1 CDS EKO11_3633 NC_016902.1 3799776 3800246 D TIGRFAM: phage virion morphogenesis protein; KEGG: cro:ROD_47191 hypothetical protein; phage virion morphogenesis protein 3799776..3800246 Escherichia coli KO11FL 11778306 YP_005279272.1 CDS EKO11_3634 NC_016902.1 3800443 3801528 D PFAM: Mu-like prophage I protein; KEGG: hin:HI1504 I protein; Mu-like prophage I protein 3800443..3801528 Escherichia coli KO11FL 11778307 YP_005279273.1 CDS EKO11_3635 NC_016902.1 3801525 3802442 D KEGG: cro:ROD_47221 phage major head subunit; phage major head subunit 3801525..3802442 Escherichia coli KO11FL 11778308 YP_005279274.1 CDS EKO11_3636 NC_016902.1 3802509 3802919 D KEGG: son:SO_0676 hypothetical protein; hypothetical protein 3802509..3802919 Escherichia coli KO11FL 11778309 YP_005279275.1 CDS EKO11_3637 NC_016902.1 3802916 3803341 D PFAM: protein of unknown function DUF1320; KEGG: cro:ROD_47241 putative prophage membrane protein; hypothetical protein 3802916..3803341 Escherichia coli KO11FL 11778310 YP_005279276.1 CDS EKO11_3638 NC_016902.1 3803341 3803889 D PFAM: Domain of unknown function DUF1834; KEGG: cro:ROD_47251 hypothetical protein; hypothetical protein 3803341..3803889 Escherichia coli KO11FL 11778311 YP_005279277.1 CDS EKO11_3639 NC_016902.1 3803873 3804079 D KEGG: cro:ROD_47261 hypothetical protein; hypothetical protein 3803873..3804079 Escherichia coli KO11FL 11779704 YP_005279278.1 CDS EKO11_3640 NC_016902.1 3804076 3805563 D KEGG: cro:ROD_47271 phage tail sheath protein; phage tail sheath protein 3804076..3805563 Escherichia coli KO11FL 11778312 YP_005279279.1 CDS EKO11_3641 NC_016902.1 3805573 3805929 D PFAM: Tail tube protein, bacteriophage; KEGG: cro:ROD_47281 phage tail tube protein; Tail tube protein, bacteriophage 3805573..3805929 Escherichia coli KO11FL 11778313 YP_005279280.1 CDS EKO11_3642 NC_016902.1 3805939 3806373 D PFAM: Mu-like prophage FluMu protein gp41; KEGG: cro:ROD_47291 hypothetical protein; Mu-like prophage FluMu protein gp41 3805939..3806373 Escherichia coli KO11FL 11779705 YP_005279281.1 CDS EKO11_3643 NC_016902.1 3806518 3808590 D TIGRFAM: phage tape measure protein; KEGG: cro:ROD_47301 phage tail tape measure protein; phage tape measure protein 3806518..3808590 Escherichia coli KO11FL 11779706 YP_005279282.1 CDS EKO11_3644 NC_016902.1 3808595 3810082 D PFAM: DNA circulation family protein; KEGG: cro:ROD_47311 phage DNA circularisation protein; DNA circulation family protein 3808595..3810082 Escherichia coli KO11FL 11778314 YP_005279283.1 CDS EKO11_3645 NC_016902.1 3810075 3811214 D KEGG: cro:ROD_47321 putative phage baseplate protein; putative phage baseplate protein 3810075..3811214 Escherichia coli KO11FL 11778315 YP_005279284.1 CDS EKO11_3646 NC_016902.1 3811202 3811795 D KEGG: cro:ROD_47331 phage baseplate assembly protein; TIGRFAM: phage baseplate assembly protein V; PFAM: Mu Gp45 domain protein; phage baseplate assembly protein V 3811202..3811795 Escherichia coli KO11FL 11779707 YP_005279285.1 CDS EKO11_3647 NC_016902.1 3811792 3812229 D PFAM: GP46 family protein; KEGG: cro:ROD_47341 hypothetical protein; GP46 family protein 3811792..3812229 Escherichia coli KO11FL 11778316 YP_005279286.1 CDS EKO11_3648 NC_016902.1 3812230 3813312 D PFAM: Baseplate J family protein; KEGG: cro:ROD_47351 hypothetical protein; baseplate J family protein 3812230..3813312 Escherichia coli KO11FL 11779708 YP_005279287.1 CDS EKO11_3649 NC_016902.1 3813303 3813845 D KEGG: cro:ROD_47361 hypothetical protein; hypothetical protein 3813303..3813845 Escherichia coli KO11FL 11778317 YP_005279288.1 CDS EKO11_3650 NC_016902.1 3813845 3815359 D PFAM: tail fiber repeat 2 protein; KEGG: sbo:SBO_1394 putative bacteriophage tail protein; tail fiber repeat 2 protein 3813845..3815359 Escherichia coli KO11FL 11778318 YP_005279289.1 CDS EKO11_3651 NC_016902.1 3815362 3815889 D PFAM: tail assembly chaperone gp38; KEGG: sbo:SBO_1393 putative tail fiber assembly protein; tail assembly chaperone gp38 3815362..3815889 Escherichia coli KO11FL 11778319 YP_005279290.1 CDS EKO11_3652 NC_016902.1 3815918 3816451 R PFAM: tail assembly chaperone gp38; KEGG: cro:ROD_36601 phage tail fibre assembly protein; tail assembly chaperone gp38 complement(3815918..3816451) Escherichia coli KO11FL 11778320 YP_005279291.1 CDS EKO11_3653 NC_016902.1 3816454 3817449 R KEGG: eoh:ECO103_1890 putative bacteriophage tail protein; putative bacteriophage tail protein complement(3816454..3817449) Escherichia coli KO11FL 11778321 YP_005279292.1 CDS EKO11_3654 NC_016902.1 3817479 3818060 D PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: sdy:SDY_1916 putative DNA-invertase; Resolvase domain-containing protein 3817479..3818060 Escherichia coli KO11FL 11778322 YP_005279293.1 CDS EKO11_3655 NC_016902.1 3818155 3818343 D KEGG: cro:ROD_19792 putative prophage DNA modification regulator; hypothetical protein 3818155..3818343 Escherichia coli KO11FL 11778323 YP_005279294.1 CDS EKO11_3656 NC_016902.1 3818294 3818989 D KEGG: sdy:SDY_1915 phage Mu Mom-like protein; phage Mu Mom-like protein 3818294..3818989 Escherichia coli KO11FL 11778324 YP_005279295.1 CDS EKO11_3657 NC_016902.1 3819144 3819539 R TIGRFAM: cytidyltransferase-related domain protein; KEGG: eoi:ECO111_0266 putative glycerol-3-phosphate cytidylyltransferase; PFAM: cytidylyltransferase; cytidyltransferase complement(3819144..3819539) Escherichia coli KO11FL 11778325 YP_005279296.1 CDS EKO11_3658 NC_016902.1 3819542 3819976 R TIGRFAM: flagellar export protein FliJ; KEGG: eoi:ECO111_0265 putative lateral flagellar export/assembly protein; flagellar export protein FliJ complement(3819542..3819976) Escherichia coli KO11FL 11778326 YP_005279297.1 CDS EKO11_3659 NC_016902.1 3819979 3821316 R TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; KEGG: eoi:ECO111_0264 putative lateral flagellum-specific ATP synthase; SMART: AAA ATPase; FliI/YscN family ATPase complement(3819979..3821316) Escherichia coli KO11FL 11778327 YP_005279298.1 CDS EKO11_3660 NC_016902.1 3821309 3822019 R PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: eoi:ECO111_0263 flagellar assembly protein H; flagellar assembly protein FliH/type III secretion system HrpE complement(3821309..3822019) Escherichia coli KO11FL 11778328 YP_005279299.1 CDS EKO11_3661 NC_016902.1 3822023 3823033 R PFAM: flagellar motor switch protein FliG; KEGG: eoj:ECO26_0256 flagellar motor switch protein G; flagellar motor switch protein FliG complement(3822023..3823033) Escherichia coli KO11FL 11778329 YP_005279300.1 CDS EKO11_3662 NC_016902.1 3823011 3824657 R KEGG: eoj:ECO26_0255 flagellar MS-ring protein; TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein; flagellar M-ring protein FliF complement(3823011..3824657) Escherichia coli KO11FL 11778330 YP_005279301.1 CDS EKO11_3663 NC_016902.1 3824662 3825003 R PFAM: flagellar hook-basal body complex protein FliE; KEGG: eoi:ECO111_0260 putative lateral flagellar basal-body component protein; flagellar hook-basal body complex protein FliE complement(3824662..3825003) Escherichia coli KO11FL 11778331 YP_005279302.1 CDS EKO11_3664 NC_016902.1 3825018 3826004 R KEGG: eoi:ECO111_0259 putative lateral flagellar RpoN-interacting regulatory protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; Fis family sigma-54 specific transcriptional regulator complement(3825018..3826004) Escherichia coli KO11FL 11778332 YP_005279303.1 CDS EKO11_3665 NC_016902.1 3826391 3827242 D PFAM: surface presentation of antigens (SPOA) protein; KEGG: eoi:ECO111_0258 putative lateral flagellar export/assembly protein; surface presentation of antigens (SPOA) protein 3826391..3827242 Escherichia coli KO11FL 11778333 YP_005279304.1 CDS EKO11_3666 NC_016902.1 3827235 3827606 D PFAM: surface presentation of antigens (SPOA) protein; KEGG: eoi:ECO111_0257 putative lateral flagellar motor switching and energizing component; surface presentation of antigens (SPOA) protein 3827235..3827606 Escherichia coli KO11FL 11778334 YP_005279305.1 CDS EKO11_3667 NC_016902.1 3827603 3828355 D KEGG: eoi:ECO111_0256 flagellar biosynthesis protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein; flagellar biosynthetic protein FliP 3827603..3828355 Escherichia coli KO11FL 11778335 YP_005279306.1 CDS EKO11_3668 NC_016902.1 3828355 3828630 D PFAM: export protein FliQ family 3; KEGG: eoj:ECO26_0249 putative lateral flagellar biosynthesis protein; export protein FliQ family 3 3828355..3828630 Escherichia coli KO11FL 11779709 YP_005279307.1 CDS EKO11_3669 NC_016902.1 3828632 3829414 D KEGG: eoj:ECO26_0248 putative lateral flagellar export pore protein; TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; flagellar biosynthetic protein FliR 3828632..3829414 Escherichia coli KO11FL 11778336 YP_005279308.1 CDS EKO11_3670 NC_016902.1 3829404 3830543 D PFAM: type III secretion exporter; KEGG: eoi:ECO111_0253 flagellar biosynthesis protein FlhB; type III secretion exporter 3829404..3830543 Escherichia coli KO11FL 11778337 YP_005279309.1 CDS EKO11_3671 NC_016902.1 3830527 3832620 D PFAM: type III secretion FHIPEP protein; KEGG: eoi:ECO111_0252 putative lateral flagellar system protein; type III secretion FHIPEP protein 3830527..3832620 Escherichia coli KO11FL 11778338 YP_005279310.1 CDS EKO11_3672 NC_016902.1 3832725 3833003 D KEGG: eoh:ECO103_0245 putative HicA; putative HicA 3832725..3833003 Escherichia coli KO11FL 11778339 YP_005279311.1 CDS EKO11_3673 NC_016902.1 3832996 3833352 D KEGG: eoh:ECO103_0244 putative HicB; putative HicB 3832996..3833352 Escherichia coli KO11FL 11778340 YP_005279312.1 CDS EKO11_3674 NC_016902.1 3833409 3834182 R PFAM: NLP/P60 protein; KEGG: eoj:ECO26_0243 putative lipoprotein and C40 family peptidase; NLP/P60 protein complement(3833409..3834182) Escherichia coli KO11FL 11778341 YP_005279313.1 CDS EKO11_3675 NC_016902.1 3834368 3834628 D KEGG: ssn:SSON_0268 damage-inducible protein J; TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; RelB/DinJ family addiction module antitoxin 3834368..3834628 Escherichia coli KO11FL 11778342 YP_005279314.1 CDS EKO11_3676 NC_016902.1 3834631 3834909 D KEGG: ssn:SSON_0267 hypothetical protein; TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; RelE/StbE family addiction module toxin 3834631..3834909 Escherichia coli KO11FL 11778343 YP_005279315.1 CDS EKO11_3677 NC_016902.1 3835065 3835805 D PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: sdy:SDY_0250 hypothetical protein; ErfK/YbiS/YcfS/YnhG family protein 3835065..3835805 Escherichia coli KO11FL 11779710 YP_005279316.1 CDS EKO11_3678 NC_016902.1 3835776 3836543 R PFAM: glutamine amidotransferase class-II; KEGG: sbc:SbBS512_E0220 glutamine amidotransferase, class II; glutamine amidotransferase complement(3835776..3836543) Escherichia coli KO11FL 11778344 YP_005279317.1 CDS EKO11_3679 NC_016902.1 3836749 3837327 R KEGG: sbc:SbBS512_E0218 phosphoheptose isomerase; TIGRFAM: phosphoheptose isomerase; PFAM: sugar isomerase (SIS); phosphoheptose isomerase complement(3836749..3837327) Escherichia coli KO11FL 11778345 YP_005279318.1 CDS EKO11_3680 NC_016902.1 3837489 3840011 D KEGG: eoh:ECO103_0237 acyl-CoA dehydrogenase; manually curated; PFAM: protein of unknown function DUF1974; acyl-CoA dehydrogenase domain-containing protein; hypothetical protein 3837489..3840011 Escherichia coli KO11FL 11779711 YP_005279319.1 CDS EKO11_3681 NC_016902.1 3840054 3840527 R KEGG: sbc:SbBS512_E0216 C-lysozyme inhibitor; manually curated; PFAM: Inhibitor of vertebrate lysozyme; lysozyme inhibitor complement(3840054..3840527) Escherichia coli KO11FL 11778346 YP_005279320.1 CDS EKO11_3682 NC_016902.1 3840681 3841451 D PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: sdy:SDY_0245 hypothetical protein; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 3840681..3841451 Escherichia coli KO11FL 11778347 YP_005279321.1 CDS EKO11_3683 NC_016902.1 3841493 3842629 R PFAM: transposase IS4 family protein; KEGG: ssn:SSON_0260 putative receptor; transposase IS4 family protein complement(3841493..3842629) Escherichia coli KO11FL 11778348 YP_005279322.1 CDS EKO11_3685 NC_016902.1 3843499 3843936 R KEGG: mmz:MmarC7_0114 TPR repeat-containing protein; hypothetical protein complement(3843499..3843936) Escherichia coli KO11FL 11779712 YP_005279323.1 CDS EKO11_3686 NC_016902.1 3843896 3847945 R KEGG: etw:ECSP_0241 hypothetical protein; TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein; YD repeat protein complement(3843896..3847945) Escherichia coli KO11FL 11778350 YP_005279324.1 CDS EKO11_3687 NC_016902.1 3848021 3850162 R TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; KEGG: eoh:ECO103_0230 VgrG protein; ImpA family type VI secretion-associated protein complement(3848021..3850162) Escherichia coli KO11FL 11778351 YP_005279325.1 CDS EKO11_3688 NC_016902.1 3850372 3850890 R KEGG: efe:EFER_1977 hypothetical protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; type VI secretion system effector complement(3850372..3850890) Escherichia coli KO11FL 11778352 YP_005279326.1 CDS EKO11_3689 NC_016902.1 3851588 3852088 D KEGG: ssn:SSON_0254 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: Uncharacterised conserved protein UCP028301; type VI secretion protein 3851588..3852088 Escherichia coli KO11FL 11778353 YP_005279327.1 CDS EKO11_3690 NC_016902.1 3852123 3852347 D KEGG: ssn:SSON_0253 hypothetical protein; hypothetical protein 3852123..3852347 Escherichia coli KO11FL 11779713 YP_005279328.1 CDS EKO11_3691 NC_016902.1 3852398 3853873 D KEGG: eoi:ECO111_0232 hypothetical protein; TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; type VI secretion protein EvpB 3852398..3853873 Escherichia coli KO11FL 11778354 YP_005279329.1 CDS EKO11_3692 NC_016902.1 3853880 3854293 D KEGG: eok:G2583_0237 hypothetical protein; TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein; type VI secretion system lysozyme-like protein 3853880..3854293 Escherichia coli KO11FL 11779714 YP_005279330.1 CDS EKO11_3693 NC_016902.1 3854297 3856147 D KEGG: eok:G2583_0236 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879; type VI secretion protein 3854297..3856147 Escherichia coli KO11FL 11778355 YP_005279331.1 CDS EKO11_3694 NC_016902.1 3856111 3857193 D KEGG: eoh:ECO103_0223 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305; type VI secretion protein 3856111..3857193 Escherichia coli KO11FL 11778356 YP_005279332.1 CDS EKO11_3695 NC_016902.1 3857218 3858498 D TIGRFAM: type VI secretion system FHA domain protein; KEGG: eoh:ECO103_0222 hypothetical protein; putative FHA domain-containing protein 3857218..3858498 Escherichia coli KO11FL 11778357 YP_005279333.1 CDS EKO11_3696 NC_016902.1 3858495 3859019 D TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: eoh:ECO103_0221 putative lipoprotein; type VI secretion lipoprotein 3858495..3859019 Escherichia coli KO11FL 11778358 YP_005279334.1 CDS EKO11_3697 NC_016902.1 3859022 3860353 D KEGG: eoi:ECO111_0225 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; type VI secretion protein 3859022..3860353 Escherichia coli KO11FL 11779715 YP_005279335.1 CDS EKO11_3698 NC_016902.1 3860358 3861119 D KEGG: eoj:ECO26_0225 hypothetical protein; TIGRFAM: type IV / VI secretion system protein, DotU family; PFAM: Type IV / VI secretion system, DotU; DotU family type IV / VI secretion system protein 3860358..3861119 Escherichia coli KO11FL 11778359 YP_005279336.1 CDS EKO11_3699 NC_016902.1 3861128 3863935 D TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; KEGG: eoi:ECO111_0223 putative ATP-dependent Clp proteinase ATP-binding chain; SMART: AAA ATPase; type VI secretion ATPase, ClpV1 family 3861128..3863935 Escherichia coli KO11FL 11778360 YP_005279337.1 CDS EKO11_3700 NC_016902.1 3863932 3864675 D TIGRFAM: type VI secretion-associated protein, VC_A0118 family; KEGG: eoi:ECO111_0222 hypothetical protein; type VI secretion-associated protein 3863932..3864675 Escherichia coli KO11FL 11778361 YP_005279338.1 CDS EKO11_3701 NC_016902.1 3864680 3866092 D KEGG: eoh:ECO103_0216 hypothetical protein; TIGRFAM: type VI secretion-associated protein, VC_A0119 family; PFAM: ImpA domain protein; type VI secretion-associated protein 3864680..3866092 Escherichia coli KO11FL 11778362 YP_005279339.1 CDS EKO11_3702 NC_016902.1 3866111 3869635 D KEGG: eoj:ECO26_0220 IcmF-like protein; TIGRFAM: type VI secretion protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215; type VI secretion protein IcmF 3866111..3869635 Escherichia coli KO11FL 11778363 YP_005279340.1 CDS EKO11_3703 NC_016902.1 3869646 3870998 D PFAM: ImpA domain protein; KEGG: eoh:ECO103_0214 hypothetical protein; ImpA domain-containing protein 3869646..3870998 Escherichia coli KO11FL 11778364 YP_005279341.1 CDS EKO11_3704 NC_016902.1 3871022 3871504 D KEGG: ssn:SSON_0233 Hcp-like protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; type VI secretion system effector 3871022..3871504 Escherichia coli KO11FL 11778365 YP_005279342.1 CDS EKO11_3705 NC_016902.1 3871548 3872462 D KEGG: eoh:ECO103_0212 hypothetical protein; hypothetical protein 3871548..3872462 Escherichia coli KO11FL 11778366 YP_005279343.1 CDS EKO11_3706 NC_016902.1 3872472 3872951 D KEGG: eoh:ECO103_0211 hypothetical protein; hypothetical protein 3872472..3872951 Escherichia coli KO11FL 11778367 YP_005279344.1 CDS EKO11_3707 NC_016902.1 3873088 3873873 R KEGG: eoh:ECO103_0210 putative aminopeptidase; putative aminopeptidase complement(3873088..3873873) Escherichia coli KO11FL 11778368 YP_005279345.1 CDS EKO11_3708 NC_016902.1 3874413 3875153 R SMART: Exonuclease; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: ebd:ECBD_3409 DNA polymerase III subunit epsilon; PFAM: Exonuclease RNase T and DNA polymerase III; DNA polymerase III subunit epsilon complement(3874413..3875153) Escherichia coli KO11FL 11779716 YP_005279346.1 CDS EKO11_3709 NC_016902.1 3875209 3875676 D KEGG: sdy:SDY_0233 ribonuclease H; PFAM: ribonuclease H; Ribonuclease H 3875209..3875676 Escherichia coli KO11FL 11778370 YP_005279347.1 CDS EKO11_3710 NC_016902.1 3875673 3876395 R PFAM: Methyltransferase type 11; KEGG: eoh:ECO103_0207 putative S-adenosyl-L-methionine-dependent methyltransferase; type 11 methyltransferase complement(3875673..3876395) Escherichia coli KO11FL 11778371 YP_005279348.1 CDS EKO11_3711 NC_016902.1 3876429 3877184 D KEGG: eok:G2583_0216 hydroxyacylglutathione hydrolase; TIGRFAM: hydroxyacylglutathione hydrolase; hydroxyacylglutathione hydrolase 3876429..3877184 Escherichia coli KO11FL 11778372 YP_005279349.1 CDS EKO11_3712 NC_016902.1 3877256 3878614 D manually curated; PFAM: MLTD_N domain protein; Lytic transglycosylase catalytic; Peptidoglycan-binding lysin domain; KEGG: ssn:SSON_0225 membrane-bound lytic murein transglycosylase D; SMART: Peptidoglycan-binding LysM; MLTD_N domain-containing protein 3877256..3878614 Escherichia coli KO11FL 11778373 YP_005279350.1 CDS EKO11_3713 NC_016902.1 3878662 3879432 R PFAM: Methyltransferase type 11; KEGG: eoi:ECO111_0207 putative S-adenosyl-L-methionine-dependent methyltransferase; type 11 methyltransferase complement(3878662..3879432) Escherichia coli KO11FL 11778374 YP_005279351.1 CDS EKO11_3714 NC_016902.1 3879510 3880289 R PFAM: Endonuclease/exonuclease/phosphatase; KEGG: sbc:SbBS512_E0205 hypothetical protein; endonuclease/exonuclease/phosphatase complement(3879510..3880289) Escherichia coli KO11FL 11778375 YP_005279352.1 CDS EKO11_3715 NC_016902.1 3880551 3881465 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ssn:SSON_0222 putative transcriptional regulator LysR-type; LysR family transcriptional regulator 3880551..3881465 Escherichia coli KO11FL 11778376 YP_005279353.1 CDS EKO11_3716 NC_016902.1 3881462 3882265 R PFAM: aldo/keto reductase; KEGG: ssn:SSON_0221 2,5-diketo-D-gluconate reductase B; aldo/keto reductase complement(3881462..3882265) Escherichia coli KO11FL 11778377 YP_005279354.1 CDS EKO11_3717 NC_016902.1 3888024 3888599 R KEGG: ssn:SSON_0214 D,D-heptose 1,7-bisphosphate phosphatase; TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Haloacid dehalogenase domain protein hydrolase; D,D-heptose 1,7-bisphosphate phosphatase complement(3888024..3888599) Escherichia coli KO11FL 11778384 YP_005279355.1 CDS EKO11_3718 NC_016902.1 3888787 3889818 D TIGRFAM: D-methionine ABC transporter, ATPase subunit; PFAM: ABC transporter related; NIL domain; KEGG: sbc:SbBS512_E0193 DL-methionine transporter ATP-binding subunit; SMART: AAA ATPase; D-methionine ABC transporter ATPase 3888787..3889818 Escherichia coli KO11FL 11778385 YP_005279356.1 CDS EKO11_3719 NC_016902.1 3889811 3890464 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbo:SBO_0187 DL-methionine transporter permease subunit; binding-protein-dependent transport system inner membrane protein 3889811..3890464 Escherichia coli KO11FL 11778386 YP_005279357.1 CDS EKO11_3720 NC_016902.1 3890504 3891319 D KEGG: sbc:SbBS512_E0191 DL-methionine transporter substrate-binding subunit; TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein; lipoprotein 3890504..3891319 Escherichia coli KO11FL 11779717 YP_005279358.1 CDS EKO11_3721 NC_016902.1 3891437 3891841 D KEGG: sdy:SDY_0215 outer membrane lipoprotein; outer membrane lipoprotein 3891437..3891841 Escherichia coli KO11FL 11778387 YP_005279359.1 CDS EKO11_3722 NC_016902.1 3891838 3892545 D PFAM: Uncharacterised protein family UPF0066; KEGG: ssn:SSON_0209 hypothetical protein; hypothetical protein 3891838..3892545 Escherichia coli KO11FL 11778388 YP_005279360.1 CDS EKO11_3723 NC_016902.1 3892656 3894374 D KEGG: sbc:SbBS512_E0188 prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; Anticodon-binding domain protein; prolyl-tRNA synthetase 3892656..3894374 Escherichia coli KO11FL 11778389 YP_005279361.1 CDS EKO11_3724 NC_016902.1 3894428 3895252 D KEGG: ebw:BWG_0186 hypothetical protein; hypothetical protein 3894428..3895252 Escherichia coli KO11FL 11778390 YP_005279362.1 CDS EKO11_3725 NC_016902.1 3895407 3896117 R KEGG: ssn:SSON_0206 lipoprotein involved with copper homeostasis and adhesion; lipoprotein involved with copper homeostasis and adhesion complement(3895407..3896117) Escherichia coli KO11FL 11779718 YP_005279363.1 CDS EKO11_3726 NC_016902.1 3896131 3896553 R PFAM: Class I peptide chain release factor; KEGG: sbc:SbBS512_E0185 peptidyl-tRNA hydrolase domain protein; class I peptide chain release factor complement(3896131..3896553) Escherichia coli KO11FL 11778391 YP_005279364.1 CDS EKO11_3727 NC_016902.1 3896550 3897095 R PFAM: YaeQ family protein; KEGG: sbc:SbBS512_E0184 hypothetical protein; YaeQ family protein complement(3896550..3897095) Escherichia coli KO11FL 11778392 YP_005279365.1 CDS EKO11_3728 NC_016902.1 3897261 3897461 D PFAM: protein of unknown function UPF0253; KEGG: sdy:SDY_0208 hypothetical protein; hypothetical protein 3897261..3897461 Escherichia coli KO11FL 11778393 YP_005279366.1 CDS EKO11_3729 NC_016902.1 3897448 3897708 D PFAM: Modulator of Rho-dependent transcription termination; KEGG: sdy:SDY_0207 Rho-binding antiterminator; transcriptional antiterminator Rof 3897448..3897708 Escherichia coli KO11FL 11778394 YP_005279367.1 CDS EKO11_3730 NC_016902.1 3897757 3899055 R KEGG: sbc:SbBS512_E0181 tRNA(Ile)-lysidine synthetase; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; Protein of unkown function DUF1946 PP-loop ATpase; tRNA(Ile)-lysidine synthetase complement(3897757..3899055) Escherichia coli KO11FL 11779719 YP_005279368.1 CDS EKO11_3731 NC_016902.1 3899120 3899509 R PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sbc:SbBS512_E0180 hypothetical protein; Glyoxalase/bleomycin resistance protein/dioxygenase complement(3899120..3899509) Escherichia coli KO11FL 11778395 YP_005279369.1 CDS EKO11_3732 NC_016902.1 3899566 3901707 R KEGG: eoi:ECO111_0187 lysine decarboxylase 2, constitutive; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; lysine decarboxylase complement(3899566..3901707) Escherichia coli KO11FL 11779720 YP_005279370.1 CDS EKO11_3733 NC_016902.1 3901806 3902765 R KEGG: sdy:SDY_0201 acetyl-CoA carboxylase carboxyltransferase subunit alpha; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region; acetyl-CoA carboxylase, carboxyl transferase subunit alpha complement(3901806..3902765) Escherichia coli KO11FL 11778396 YP_005279371.1 CDS EKO11_3734 NC_016902.1 3902778 3906260 R SMART: phosphoesterase PHP domain protein; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: eoh:ECO103_0182 DNA polymerase III subunit alpha; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III subunit alpha complement(3902778..3906260) Escherichia coli KO11FL 11778397 YP_005279372.1 CDS EKO11_3735 NC_016902.1 3906297 3906893 R KEGG: ssn:SSON_0195 ribonuclease HII; PFAM: ribonuclease HII/HIII; Ribonuclease H complement(3906297..3906893) Escherichia coli KO11FL 11778398 YP_005279373.1 CDS EKO11_3736 NC_016902.1 3906890 3908038 R TIGRFAM: lipid-A-disaccharide synthase; KEGG: eoh:ECO103_0180 lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19; lipid-A-disaccharide synthase complement(3906890..3908038) Escherichia coli KO11FL 11778399 YP_005279374.1 CDS EKO11_3737 NC_016902.1 3908038 3908826 R TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: sdy:SDY_0197 UDP-N-acetylglucosamine acyltransferase; PFAM: transferase hexapeptide repeat containing protein; acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase complement(3908038..3908826) Escherichia coli KO11FL 11779721 YP_005279375.1 CDS EKO11_3738 NC_016902.1 3908830 3909285 R KEGG: sfv:SFV_0163 (3R)-hydroxymyristoyl-ACP dehydratase; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ complement(3908830..3909285) Escherichia coli KO11FL 11778400 YP_005279376.1 CDS EKO11_3739 NC_016902.1 3909390 3910415 R KEGG: sdy:SDY_0195 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; transferase hexapeptide repeat containing protein; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase complement(3909390..3910415) Escherichia coli KO11FL 11778401 YP_005279377.1 CDS EKO11_3740 NC_016902.1 3910419 3910904 R PFAM: outer membrane chaperone Skp (OmpH); KEGG: sdy:SDY_0194 periplasmic chaperone; outer membrane chaperone Skp complement(3910419..3910904) Escherichia coli KO11FL 11778402 YP_005279378.1 CDS EKO11_3741 NC_016902.1 3911026 3913458 R KEGG: sbc:SbBS512_E0170 outer membrane protein assembly factor YaeT; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein; outer membrane protein assembly complex, YaeT protein complement(3911026..3913458) Escherichia coli KO11FL 11778403 YP_005279379.1 CDS EKO11_3742 NC_016902.1 3913488 3914840 R TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; KEGG: sfv:SFV_0159 zinc metallopeptidase RseP; SMART: PDZ/DHR/GLGF domain protein; membrane-associated zinc metalloprotease complement(3913488..3914840) Escherichia coli KO11FL 11778404 YP_005279380.1 CDS EKO11_3743 NC_016902.1 3914852 3915709 R KEGG: sbc:SbBS512_E0168 CDP-diglyceride synthase; manually curated; PFAM: phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase complement(3914852..3915709) Escherichia coli KO11FL 11778405 YP_005279381.1 CDS EKO11_3744 NC_016902.1 3915722 3916480 R TIGRFAM: undecaprenyl diphosphate synthase; KEGG: sdy:SDY_0190 undecaprenyl pyrophosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; undecaprenyl diphosphate synthase complement(3915722..3916480) Escherichia coli KO11FL 11778406 YP_005279382.1 CDS EKO11_3745 NC_016902.1 3916669 3917865 R TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: sbc:SbBS512_E0166 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain-containing protein; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(3916669..3917865) Escherichia coli KO11FL 11778407 YP_005279383.1 CDS EKO11_3746 NC_016902.1 3917957 3918514 R KEGG: sdy:SDY_0188 ribosome recycling factor; TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor; ribosome recycling factor complement(3917957..3918514) Escherichia coli KO11FL 11778408 YP_005279384.1 CDS EKO11_3747 NC_016902.1 3918806 3919531 R KEGG: sbc:SbBS512_E0164 uridylate kinase; TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; uridylate kinase complement(3918806..3919531) Escherichia coli KO11FL 11778409 YP_005279385.1 CDS EKO11_3748 NC_016902.1 3919678 3920529 R KEGG: sdy:SDY_0186 elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein; translation elongation factor Ts complement(3919678..3920529) Escherichia coli KO11FL 11778410 YP_005279386.1 CDS EKO11_3749 NC_016902.1 3920787 3921512 R KEGG: sbc:SbBS512_E0162 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; 30S ribosomal protein S2 complement(3920787..3921512) Escherichia coli KO11FL 11779722 YP_005279387.1 CDS EKO11_3750 NC_016902.1 3921880 3922674 D KEGG: sdy:SDY_0184 methionine aminopeptidase; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; methionine aminopeptidase 3921880..3922674 Escherichia coli KO11FL 11778411 YP_005279388.1 CDS EKO11_3751 NC_016902.1 3922736 3925408 D SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: protein-P-II uridylyltransferase; KEGG: eoj:ECO26_0169 PII uridylyl-transferase; PFAM: GlnD PII-uridylyltransferase; DNA polymerase beta domain protein region; metal-dependent phosphohydrolase HD sub domain; amino acid-binding ACT domain protein; UTP-GlnB uridylyltransferase, GlnD 3922736..3925408 Escherichia coli KO11FL 11778412 YP_005279389.1 CDS EKO11_3752 NC_016902.1 3925439 3926263 D TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; KEGG: ssn:SSON_0178 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3925439..3926263 Escherichia coli KO11FL 11778413 YP_005279390.1 CDS EKO11_3753 NC_016902.1 3926575 3926961 D KEGG: sdy:SDY_0181 hypothetical protein; hypothetical protein 3926575..3926961 Escherichia coli KO11FL 11778414 YP_005279391.1 CDS EKO11_3754 NC_016902.1 3927050 3928207 R PFAM: sugar diacid recognition domain protein; KEGG: ssn:SSON_0175 carbohydrate diacid transcriptional activator CdaR; transcriptional regulator CdaR complement(3927050..3928207) Escherichia coli KO11FL 11778415 YP_005279392.1 CDS EKO11_3755 NC_016902.1 3928362 3929786 R SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: sbc:SbBS512_E0154 serine endoprotease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; protease Do complement(3928362..3929786) Escherichia coli KO11FL 11778416 YP_005279393.1 CDS EKO11_3756 NC_016902.1 3929916 3931433 R SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; KEGG: sfv:SFV_0145 deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; deoxyguanosinetriphosphate triphosphohydrolase complement(3929916..3931433) Escherichia coli KO11FL 11778417 YP_005279394.1 CDS EKO11_3757 NC_016902.1 3931517 3932215 D TIGRFAM: MTA/SAH nucleosidase; KEGG: sdy:SDY_0175 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; PFAM: purine or other phosphorylase family 1; MTA/SAH nucleosidase 3931517..3932215 Escherichia coli KO11FL 11778418 YP_005279395.1 CDS EKO11_3758 NC_016902.1 3932208 3933008 D PFAM: periplasmic binding protein; KEGG: ssn:SSON_0170 vitamin B12-transporter protein BtuF; periplasmic binding protein 3932208..3933008 Escherichia coli KO11FL 11778419 YP_005279396.1 CDS EKO11_3759 NC_016902.1 3933046 3933669 D PFAM: Uncharacterised protein family UPF0126; KEGG: sbc:SbBS512_E0149 hypothetical protein; hypothetical protein 3933046..3933669 Escherichia coli KO11FL 11778420 YP_005279397.1 CDS EKO11_3760 NC_016902.1 3933716 3934060 R KEGG: sdy:SDY_0172 iron-sulfur cluster insertion protein ErpA; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; iron-sulfur cluster assembly accessory protein complement(3933716..3934060) Escherichia coli KO11FL 11779723 YP_005279398.1 CDS EKO11_3761 NC_016902.1 3934142 3935563 R PFAM: Cl- channel voltage-gated family protein; KEGG: ssn:SSON_0167 chloride channel protein; Cl- channel voltage-gated family protein complement(3934142..3935563) Escherichia coli KO11FL 11778421 YP_005279399.1 CDS EKO11_3762 NC_016902.1 3935788 3937068 D KEGG: ebd:ECBD_3464 glutamate-1-semialdehyde aminotransferase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; glutamate-1-semialdehyde-2,1-aminomutase 3935788..3937068 Escherichia coli KO11FL 11778422 YP_005279400.1 CDS EKO11_3763 NC_016902.1 3937103 3939085 R PFAM: transport system permease protein; KEGG: eoj:ECO26_0156 iron-hydroxamate transporter permease subunit; transport system permease complement(3937103..3939085) Escherichia coli KO11FL 11778423 YP_005279401.1 CDS EKO11_3764 NC_016902.1 3939082 3939972 R PFAM: periplasmic binding protein; KEGG: eoh:ECO103_0152 iron-hydroxamate transporter substrate-binding subunit; periplasmic binding protein complement(3939082..3939972) Escherichia coli KO11FL 11778424 YP_005279402.1 CDS EKO11_3765 NC_016902.1 3939972 3940769 R KEGG: ebw:BWG_0144 iron-hydroxamate transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(3939972..3940769) Escherichia coli KO11FL 11778425 YP_005279403.1 CDS EKO11_3766 NC_016902.1 3940820 3943063 R KEGG: eoh:ECO103_0150 ferrichrome outer membrane transporter; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; TonB-dependent siderophore receptor complement(3940820..3943063) Escherichia coli KO11FL 11778426 YP_005279404.1 CDS EKO11_3767 NC_016902.1 3943283 3945817 R TIGRFAM: penicillin-binding protein 1B; KEGG: sfv:SFV_0134 penicillin-binding protein 1B; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; penicillin-binding protein 1B complement(3943283..3945817) Escherichia coli KO11FL 11778427 YP_005279405.1 CDS EKO11_3768 NC_016902.1 3946013 3948442 R TIGRFAM: ATP-dependent helicase HrpB; PFAM: Helicase ATP-dependent domain protein; helicase domain protein; helicase-associated domain protein; KEGG: ebw:BWG_0141 ATP-dependent RNA helicase HrpB; SMART: DEAD-like helicase ; helicase domain protein; ATP-dependent helicase HrpB complement(3946013..3948442) Escherichia coli KO11FL 11779724 YP_005279406.1 CDS EKO11_3769 NC_016902.1 3948516 3949046 D KEGG: ssn:SSON_0159 hypothetical protein; TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; 2'-5' RNA ligase 3948516..3949046 Escherichia coli KO11FL 11779725 YP_005279407.1 CDS EKO11_3770 NC_016902.1 3949061 3949765 D KEGG: eok:G2583_0150 sugar fermentation stimulation protein A; TIGRFAM: sugar fermentation stimulation protein; PFAM: sugar fermentation stimulation protein; sugar fermentation stimulation protein 3949061..3949765 Escherichia coli KO11FL 11778428 YP_005279408.1 CDS EKO11_3771 NC_016902.1 3949943 3950398 D TIGRFAM: RNA polymerase-binding protein DksA; KEGG: ctu:Ctu_07760 RNA polymerase-binding transcription factor; TraR/DksA family transcriptional regulator 3949943..3950398 Escherichia coli KO11FL 11778429 YP_005279409.1 CDS EKO11_3772 NC_016902.1 3950435 3951361 D PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; KEGG: eoi:ECO111_0146 glutamyl-Q tRNA(Asp) synthetase; glutamyl/glutaminyl-tRNA synthetase 3950435..3951361 Escherichia coli KO11FL 11778430 YP_005279410.1 CDS EKO11_3773 NC_016902.1 3951421 3952818 D manually curated; TIGRFAM: poly(A) polymerase; KEGG: sbo:SBO_0132 poly(A) polymerase I; PFAM: Polynucleotide adenylyltransferase region; poly(A) polymerase 3951421..3952818 Escherichia coli KO11FL 11778431 YP_005279411.1 CDS EKO11_3774 NC_016902.1 3952815 3953294 D TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; KEGG: ebd:ECBD_3477 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 3952815..3953294 Escherichia coli KO11FL 11779726 YP_005279412.1 CDS EKO11_3775 NC_016902.1 3953664 3954248 D PFAM: Fimbrial protein domain-containing protein; KEGG: ssn:SSON_0153 putative fimbrial-like protein; fimbrial protein domain-containing protein 3953664..3954248 Escherichia coli KO11FL 11778432 YP_005279413.1 CDS EKO11_3776 NC_016902.1 3954353 3955093 D PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: ebd:ECBD_3479 putative chaperone protein EcpD; Pili assembly chaperone, N-terminal protein 3954353..3955093 Escherichia coli KO11FL 11778433 YP_005279414.1 CDS EKO11_3777 NC_016902.1 3955128 3957728 D PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: eoj:ECO26_0142 putative outer membrane usher protein; fimbrial biogenesis outer membrane usher protein 3955128..3957728 Escherichia coli KO11FL 11778434 YP_005279415.1 CDS EKO11_3778 NC_016902.1 3957745 3958314 D KEGG: ebd:ECBD_3481 putative fimbrial-like adhesin exported protein; putative fimbrial-like adhesin exported protein 3957745..3958314 Escherichia coli KO11FL 11778435 YP_005279416.1 CDS EKO11_3779 NC_016902.1 3958329 3958931 D PFAM: Fimbrial protein domain-containing protein; KEGG: ebd:ECBD_3482 fimbrial protein; fimbrial protein domain-containing protein 3958329..3958931 Escherichia coli KO11FL 11778436 YP_005279417.1 CDS EKO11_3780 NC_016902.1 3958958 3959554 D KEGG: ssn:SSON_0145 putative fimbrial protein; putative fimbrial protein 3958958..3959554 Escherichia coli KO11FL 11778437 YP_005279418.1 CDS EKO11_3781 NC_016902.1 3959607 3960881 D PFAM: Fimbrial protein domain-containing protein; KEGG: ebd:ECBD_3484 putative fimbrial-like adhesin protein; fimbrial protein domain-containing protein 3959607..3960881 Escherichia coli KO11FL 11778438 YP_005279419.1 CDS EKO11_3782 NC_016902.1 3960994 3961788 D TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; KEGG: eoh:ECO103_0134 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 3960994..3961788 Escherichia coli KO11FL 11778439 YP_005279420.1 CDS EKO11_3783 NC_016902.1 3961800 3962651 D KEGG: eoh:ECO103_0133 pantoate--beta-alanine ligase; TIGRFAM: pantoate/beta-alanine ligase; cytidyltransferase-related domain protein; PFAM: Pantoate-beta-alanine ligase; pantoate--beta-alanine ligase 3961800..3962651 Escherichia coli KO11FL 11778440 YP_005279421.1 CDS EKO11_3784 NC_016902.1 3962725 3963684 R PFAM: transposase YhgA family protein; KEGG: ssn:SSON_0140 hypothetical protein; transposase YhgA family protein complement(3962725..3963684) Escherichia coli KO11FL 11778441 YP_005279422.1 CDS EKO11_3785 NC_016902.1 3963901 3964281 D TIGRFAM: aspartate 1-decarboxylase; KEGG: sdy:SDY_0041 aspartate alpha-decarboxylase; PFAM: aspartate decarboxylase; aspartate 1-decarboxylase 3963901..3964281 Escherichia coli KO11FL 11778442 YP_005279423.1 CDS EKO11_3786 NC_016902.1 3964285 3965514 R PFAM: polysaccharide deacetylase; KEGG: eoh:ECO103_0130 putative polysaccharide deacetylase lipoprotein; polysaccharide deacetylase complement(3964285..3965514) Escherichia coli KO11FL 11779727 YP_005279424.1 CDS EKO11_3787 NC_016902.1 3965578 3966018 R PFAM: PTS system fructose subfamily IIA component; KEGG: eoi:ECO111_0130 putative PTS enzyme IIA; PTS system fructose subfamily transporter subunit IIA complement(3965578..3966018) Escherichia coli KO11FL 11778443 YP_005279425.1 CDS EKO11_3788 NC_016902.1 3966123 3966893 R PFAM: ABC-2 type transporter; KEGG: sdy:SDY_0037 hypothetical protein; ABC transporter complement(3966123..3966893) Escherichia coli KO11FL 11778444 YP_005279426.1 CDS EKO11_3789 NC_016902.1 3966890 3967816 R KEGG: ssn:SSON_0135 putative ATP-binding component of a transport system; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(3966890..3967816) Escherichia coli KO11FL 11778445 YP_005279427.1 CDS EKO11_3790 NC_016902.1 3967925 3968587 D KEGG: ssn:SSON_0134 carbonic anhydrase; PFAM: carbonic anhydrase; carbonate dehydratase 3967925..3968587 Escherichia coli KO11FL 11778446 YP_005279428.1 CDS EKO11_3791 NC_016902.1 3968628 3969164 R TIGRFAM: hypoxanthine phosphoribosyltransferase; KEGG: sdy:SDY_0034 hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase complement(3968628..3969164) Escherichia coli KO11FL 11778447 YP_005279429.1 CDS EKO11_3792 NC_016902.1 3969370 3971760 D SMART: Pyrrolo-quinoline quinone beta-propeller repeat; TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; KEGG: ebw:BWG_0117 glucose dehydrogenase; PFAM: PQQ-dependent enzyme-like; Pyrrolo-quinoline quinone repeat-containing protein; membrane-bound PQQ-dependent dehydrogenase 3969370..3971760 Escherichia coli KO11FL 11778448 YP_005279430.1 CDS EKO11_3793 NC_016902.1 3971807 3973357 R PFAM: multicopper oxidase type 3; multicopper oxidase type 2; KEGG: ebw:BWG_0116 multicopper oxidase; multicopper oxidase type 3 complement(3971807..3973357) Escherichia coli KO11FL 11778449 YP_005279431.1 CDS EKO11_3794 NC_016902.1 3973523 3973870 D KEGG: sdy:SDY_0029 hypothetical protein; hypothetical protein 3973523..3973870 Escherichia coli KO11FL 11778450 YP_005279432.1 CDS EKO11_3795 NC_016902.1 3973976 3974842 D KEGG: ebd:ECBD_3498 spermidine synthase; TIGRFAM: spermidine synthase; PFAM: Spermine synthase; spermidine synthase 3973976..3974842 Escherichia coli KO11FL 11778451 YP_005279433.1 CDS EKO11_3796 NC_016902.1 3974858 3975652 D TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; KEGG: sbc:SbBS512_E0113 S-adenosylmethionine decarboxylase; PFAM: S-adenosylmethionine decarboxylase related; S-adenosylmethionine decarboxylase 3974858..3975652 Escherichia coli KO11FL 11779728 YP_005279434.1 CDS EKO11_3797 NC_016902.1 3975690 3976052 R PFAM: Uncharacterised conserved protein UCP006287; KEGG: sdy:SDY_0026 hypothetical protein; hypothetical protein complement(3975690..3976052) Escherichia coli KO11FL 11779729 YP_005279435.1 CDS EKO11_3798 NC_016902.1 3976228 3978825 R KEGG: sbo:SBO_0107 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; TIGRFAM: aconitate hydratase 2; PFAM: Aconitase B; aconitate hydratase domain-containing protein; aconitate hydratase 2 complement(3976228..3978825) Escherichia coli KO11FL 11778452 YP_005279436.1 CDS EKO11_3799 NC_016902.1 3979180 3980937 D KEGG: ssn:SSON_0125 hypothetical protein; hypothetical protein 3979180..3980937 Escherichia coli KO11FL 11778453 YP_005279437.1 CDS EKO11_3800 NC_016902.1 3981008 3982432 R KEGG: sbc:SbBS512_E0109 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; dihydrolipoamide dehydrogenase complement(3981008..3982432) Escherichia coli KO11FL 11778454 YP_005279438.1 CDS EKO11_3801 NC_016902.1 3982757 3984649 R TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; KEGG: sbc:SbBS512_E0108 dihydrolipoamide acetyltransferase; PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase complement(3982757..3984649) Escherichia coli KO11FL 11778455 YP_005279439.1 CDS EKO11_3802 NC_016902.1 3984664 3987327 R KEGG: eok:G2583_0118 pyruvate dehydrogenase E1 component; TIGRFAM: 2-oxo-acid dehydrogenase E1 subunit, homodimeric type; PFAM: Transketolase domain-containing protein; 2-oxo-acid dehydrogenase E1 subunit, homodimeric type complement(3984664..3987327) Escherichia coli KO11FL 11778456 YP_005279440.1 CDS EKO11_3803 NC_016902.1 3987488 3988252 R KEGG: sbc:SbBS512_E0106 transcriptional regulator PdhR; PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH; regulatory protein GntR HTH complement(3987488..3988252) Escherichia coli KO11FL 11778457 YP_005279441.1 CDS EKO11_3804 NC_016902.1 3988796 3990166 D PFAM: amino acid permease-associated region; KEGG: efe:EFER_0132 aromatic amino acid transporter; amino acid permease 3988796..3990166 Escherichia coli KO11FL 11778458 YP_005279442.1 CDS EKO11_3805 NC_016902.1 3990209 3991063 R KEGG: ssn:SSON_0119 regulatory protein AmpE; signaling modulator of AmpD, AmpE complement(3990209..3991063) Escherichia coli KO11FL 11778459 YP_005279443.1 CDS EKO11_3806 NC_016902.1 3991060 3991611 R KEGG: ebd:ECBD_3509 N-acetyl-anhydromuranmyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2; N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD complement(3991060..3991611) Escherichia coli KO11FL 11778460 YP_005279444.1 CDS EKO11_3807 NC_016902.1 3991699 3992592 D TIGRFAM: nicotinate-nucleotide pyrophosphorylase; KEGG: ebd:ECBD_3510 quinolinate phosphoribosyltransferase; PFAM: Quinolinate phosphoribosyl transferase; nicotinate-nucleotide pyrophosphorylase 3991699..3992592 Escherichia coli KO11FL 11778461 YP_005279445.1 CDS EKO11_3808 NC_016902.1 3992795 3993235 D KEGG: ebd:ECBD_3511 putative major pilin subunit; putative major pilin subunit 3992795..3993235 Escherichia coli KO11FL 11779730 YP_005279446.1 CDS EKO11_3809 NC_016902.1 3993245 3994630 D PFAM: type II secretion system protein E; KEGG: ebd:ECBD_3512 hypothetical protein; type II secretion system protein E 3993245..3994630 Escherichia coli KO11FL 11779731 YP_005279447.1 CDS EKO11_3810 NC_016902.1 3994620 3995822 D PFAM: Type II secretion system F domain; KEGG: sbc:SbBS512_E0098 type IV pilin biogenesis protein; type II secretion system F domain-containing protein 3994620..3995822 Escherichia coli KO11FL 11778462 YP_005279448.1 CDS EKO11_3811 NC_016902.1 3995857 3996900 R KEGG: ssn:SSON_0112 guanosine 5'-monophosphate oxidoreductase; TIGRFAM: guanosine monophosphate reductase; PFAM: IMP dehydrogenase/GMP reductase; guanosine monophosphate reductase complement(3995857..3996900) Escherichia coli KO11FL 11778463 YP_005279449.1 CDS EKO11_3812 NC_016902.1 3997125 3997745 D TIGRFAM: dephospho-CoA kinase; KEGG: sdy:SDY_0133 dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; dephospho-CoA kinase 3997125..3997745 Escherichia coli KO11FL 11778464 YP_005279450.1 CDS EKO11_3813 NC_016902.1 3997745 3998488 D PFAM: protein of unknown function DUF1342; KEGG: ssn:SSON_0110 hypothetical protein; hypothetical protein 3997745..3998488 Escherichia coli KO11FL 11778465 YP_005279451.1 CDS EKO11_3814 NC_016902.1 3998498 3998695 D PFAM: protein of unknown function DUF329; KEGG: sdy:SDY_0131 zinc-binding protein; hypothetical protein 3998498..3998695 Escherichia coli KO11FL 11778466 YP_005279452.1 CDS EKO11_3815 NC_016902.1 3998795 3999184 R KEGG: ssn:SSON_0107 nucleoside triphosphate pyrophosphohydrolase; TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; mutator MutT protein complement(3998795..3999184) Escherichia coli KO11FL 11778467 YP_005279453.1 CDS EKO11_3816 NC_016902.1 3999244 4001949 R KEGG: sbc:SbBS512_E0092 preprotein translocase subunit SecA; TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; SecA Wing and Scaffold; SEC-C motif domain protein; Preprotein translocase subunit SecA complement(3999244..4001949) Escherichia coli KO11FL 11778468 YP_005279454.1 CDS EKO11_3817 NC_016902.1 4002011 4002694 R KEGG: eok:G2583_0101 secretion monitor protein; manually curated; PFAM: secretion monitor family proten; secretion monitor family proten complement(4002011..4002694) Escherichia coli KO11FL 11778469 YP_005279455.1 CDS EKO11_3818 NC_016902.1 4002753 4003670 R KEGG: sdy:SDY_0126 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; UDP-3-0-acyl N-acetylglucosamine deacetylase complement(4002753..4003670) Escherichia coli KO11FL 11778470 YP_005279456.1 CDS EKO11_3819 NC_016902.1 4003771 4004922 R KEGG: sdy:SDY_0125 cell division protein FtsZ; TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain; cell division protein FtsZ complement(4003771..4004922) Escherichia coli KO11FL 11778471 YP_005279457.1 CDS EKO11_3820 NC_016902.1 4004983 4006245 R KEGG: sdy:SDY_0124 cell division protein FtsA; TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA; cell division protein FtsA complement(4004983..4006245) Escherichia coli KO11FL 11778472 YP_005279458.1 CDS EKO11_3821 NC_016902.1 4006242 4007072 R PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: sbc:SbBS512_E0086 cell division protein FtsQ; cell division protein FtsQ complement(4006242..4007072) Escherichia coli KO11FL 11778473 YP_005279459.1 CDS EKO11_3822 NC_016902.1 4007074 4007994 R TIGRFAM: D-alanine/D-alanine ligase; KEGG: ssn:SSON_0100 D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein; D-alanine--D-alanine ligase complement(4007074..4007994) Escherichia coli KO11FL 11778474 YP_005279460.1 CDS EKO11_3823 NC_016902.1 4007987 4009462 R KEGG: ebd:ECBD_3526 UDP-N-acetylmuramate--L-alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; UDP-N-acetylmuramate--L-alanine ligase complement(4007987..4009462) Escherichia coli KO11FL 11778475 YP_005279461.1 CDS EKO11_3824 NC_016902.1 4009516 4010583 R KEGG: sbo:SBO_0078 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain; UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase complement(4009516..4010583) Escherichia coli KO11FL 11778476 YP_005279462.1 CDS EKO11_3825 NC_016902.1 4010580 4011824 R KEGG: sdy:SDY_0119 cell division protein FtsW; TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; cell division protein FtsW complement(4010580..4011824) Escherichia coli KO11FL 11778477 YP_005279463.1 CDS EKO11_3826 NC_016902.1 4011824 4013140 R KEGG: sbo:SBO_0076 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; UDP-N-acetylmuramoylalanine--D-glutamate ligase complement(4011824..4013140) Escherichia coli KO11FL 11778478 YP_005279464.1 CDS EKO11_3827 NC_016902.1 4013143 4014225 R KEGG: sbc:SbBS512_E0080 phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(4013143..4014225) Escherichia coli KO11FL 11778479 YP_005279465.1 CDS EKO11_3828 NC_016902.1 4014219 4015577 R KEGG: sbc:SbBS512_E0079 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase complement(4014219..4015577) Escherichia coli KO11FL 11778480 YP_005279466.1 CDS EKO11_3829 NC_016902.1 4015574 4017061 R KEGG: eoh:ECO103_0087 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; UDP-N-acetylmuramyl tripeptide synthetase complement(4015574..4017061) Escherichia coli KO11FL 11778481 YP_005279467.1 CDS EKO11_3830 NC_016902.1 4017048 4018814 R KEGG: sdy:SDY_0114 penicillin-binding protein 3; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; peptidoglycan glycosyltransferase complement(4017048..4018814) Escherichia coli KO11FL 11778482 YP_005279468.1 CDS EKO11_3831 NC_016902.1 4018830 4019195 R KEGG: sdy:SDY_0113 cell division protein FtsL; TIGRFAM: cell division protein FtsL; PFAM: cell division protein FtsL; cell division protein FtsL complement(4018830..4019195) Escherichia coli KO11FL 11778483 YP_005279469.1 CDS EKO11_3832 NC_016902.1 4019192 4020133 R KEGG: sbc:SbBS512_E0075 S-adenosyl-methyltransferase MraW; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; S-adenosyl-methyltransferase MraW complement(4019192..4020133) Escherichia coli KO11FL 11778484 YP_005279470.1 CDS EKO11_3833 NC_016902.1 4020135 4020593 R KEGG: sbc:SbBS512_E0074 cell division protein MraZ; TIGRFAM: MraZ protein; PFAM: MraZ domain; MraZ protein complement(4020135..4020593) Escherichia coli KO11FL 11778485 YP_005279471.1 CDS EKO11_3834 NC_016902.1 4021195 4022199 R TIGRFAM: D-fructose-responsive transcription factor; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sbc:SbBS512_E0073 DNA-binding transcriptional regulator FruR; SMART: regulatory protein LacI; LacI family transcriptional regulator complement(4021195..4022199) Escherichia coli KO11FL 11778486 YP_005279472.1 CDS EKO11_3835 NC_016902.1 4022281 4022376 R manually curated; KEGG: eok:G2583_0083 FruR leader peptide; FruR leader peptide complement(4022281..4022376) Escherichia coli KO11FL 11778487 YP_005279473.1 CDS EKO11_3836 NC_016902.1 4022379 4022870 R TIGRFAM: acetolactate synthase, small subunit; KEGG: sfv:SFV_0069 acetolactate synthase 3 regulatory subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein; acetolactate synthase small subunit complement(4022379..4022870) Escherichia coli KO11FL 11778488 YP_005279474.1 CDS EKO11_3837 NC_016902.1 4022873 4024597 R KEGG: ssn:SSON_0084 acetolactate synthase 3 catalytic subunit; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; acetolactate synthase large subunit complement(4022873..4024597) Escherichia coli KO11FL 11778489 YP_005279475.1 CDS EKO11_3838 NC_016902.1 4024915 4025859 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ssn:SSON_0083 leucine transcriptional activator; LysR family transcriptional regulator complement(4024915..4025859) Escherichia coli KO11FL 11778490 YP_005279476.1 CDS EKO11_3839 NC_016902.1 4026698 4028269 D KEGG: sbc:SbBS512_E0068 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain-containing protein; 2-isopropylmalate synthase 4026698..4028269 Escherichia coli KO11FL 11778491 YP_005279477.1 CDS EKO11_3840 NC_016902.1 4028269 4029360 D TIGRFAM: 3-isopropylmalate dehydrogenase; KEGG: ebd:ECBD_3543 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 4028269..4029360 Escherichia coli KO11FL 11778492 YP_005279478.1 CDS EKO11_3841 NC_016902.1 4029363 4030763 D KEGG: sbc:SbBS512_E0066 isopropylmalate isomerase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain-containing protein; 3-isopropylmalate dehydratase large subunit 4029363..4030763 Escherichia coli KO11FL 11778493 YP_005279479.1 CDS EKO11_3842 NC_016902.1 4030774 4031379 D KEGG: sbc:SbBS512_E0065 isopropylmalate isomerase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain-containing protein; 3-isopropylmalate dehydratase small subunit 4030774..4031379 Escherichia coli KO11FL 11778494 YP_005279480.1 CDS EKO11_3843 NC_016902.1 4031428 4032606 R KEGG: eoh:ECO103_0072 broad specificity sugar efflux system SetA; TIGRFAM: sugar efflux transporter; PFAM: major facilitator superfamily MFS_1; sugar efflux transporter complement(4031428..4032606) Escherichia coli KO11FL 11778495 YP_005279481.1 CDS EKO11_3844 NC_016902.1 4032708 4032839 R KEGG: ebd:ECBD_3547 hypothetical protein; hypothetical protein complement(4032708..4032839) Escherichia coli KO11FL 11778496 YP_005279482.1 CDS EKO11_3845 NC_016902.1 4032928 4034583 D PFAM: extracellular solute-binding protein family 5; KEGG: sbc:SbBS512_E0062 transcriptional regulator SgrR; family 5 extracellular solute-binding protein 4032928..4034583 Escherichia coli KO11FL 11778497 YP_005279483.1 CDS EKO11_3846 NC_016902.1 4034747 4035730 D KEGG: eoh:ECO103_0069 thiamine transporter substrate binding subunit; TIGRFAM: thiamine ABC transporter, periplasmic binding protein; ABC transporter, periplasmic binding protein, thiB subfamily; PFAM: extracellular solute-binding protein family 1; thiamine ABC transporter, periplasmic binding protein 4034747..4035730 Escherichia coli KO11FL 11779732 YP_005279484.1 CDS EKO11_3847 NC_016902.1 4035706 4037316 D KEGG: sfx:S0064 thiamine transporter membrane protein; TIGRFAM: thiamine ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; thiamine ABC transporter, inner membrane subunit 4035706..4037316 Escherichia coli KO11FL 11778498 YP_005279485.1 CDS EKO11_3848 NC_016902.1 4037300 4037998 D TIGRFAM: ABC transporter, ATPase subunit, ThiQ subfamily; PFAM: ABC transporter related; KEGG: ssn:SSON_0072 thiamine transporter ATP-binding subunit; SMART: AAA ATPase; ABC transporter ATPase 4037300..4037998 Escherichia coli KO11FL 11778499 YP_005279486.1 CDS EKO11_3849 NC_016902.1 4038100 4038864 R PFAM: SNARE associated Golgi protein; KEGG: sbo:SBO_0052 hypothetical protein; hypothetical protein complement(4038100..4038864) Escherichia coli KO11FL 11778500 YP_005279487.1 CDS EKO11_3850 NC_016902.1 4038950 4039828 R KEGG: sbo:SBO_0051 DNA-binding transcriptional regulator AraC; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(4038950..4039828) Escherichia coli KO11FL 11778501 YP_005279488.1 CDS EKO11_3851 NC_016902.1 4040167 4041867 D KEGG: ebd:ECBD_3554 ribulokinase; TIGRFAM: L-ribulokinase; PFAM: Carbohydrate kinase, FGGY-like; L-ribulokinase 4040167..4041867 Escherichia coli KO11FL 11779733 YP_005279489.1 CDS EKO11_3852 NC_016902.1 4041878 4043380 D KEGG: sbo:SBO_0049 L-arabinose isomerase; PFAM: L-arabinose isomerase; L-arabinose isomerase 4041878..4043380 Escherichia coli KO11FL 11778502 YP_005279490.1 CDS EKO11_3853 NC_016902.1 4043549 4044244 D KEGG: ssn:SSON_0067 L-ribulose-5-phosphate 4-epimerase; TIGRFAM: L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein; L-ribulose-5-phosphate 4-epimerase 4043549..4044244 Escherichia coli KO11FL 11778503 YP_005279491.1 CDS EKO11_3854 NC_016902.1 4044319 4046670 D KEGG: eoh:ECO103_0061 DNA polymerase II; PFAM: DNA polymerase B region; DNA polymerase B exonuclease; SMART: DNA-directed DNA polymerase B; DNA polymerase B region 4044319..4046670 Escherichia coli KO11FL 11778504 YP_005279492.1 CDS EKO11_3855 NC_016902.1 4046835 4049741 D KEGG: ebd:ECBD_3558 ATP-dependent helicase HepA; PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; SNF2-related protein 4046835..4049741 Escherichia coli KO11FL 11778505 YP_005279493.1 CDS EKO11_3856 NC_016902.1 4049753 4050412 D PFAM: pseudouridine synthase; KEGG: sdy:SDY_0082 23S rRNA/tRNA pseudouridine synthase A; pseudouridine synthase 4049753..4050412 Escherichia coli KO11FL 11778506 YP_005279494.1 CDS EKO11_3857 NC_016902.1 4050529 4051389 R manually curated; PFAM: heat shock protein DnaJ domain protein; KEGG: sdy:SDY_0080 Dna-J like membrane chaperone protein; SMART: heat shock protein DnaJ domain protein; heat shock protein DnaJ domain-containing protein complement(4050529..4051389) Escherichia coli KO11FL 11778507 YP_005279495.1 CDS EKO11_3858 NC_016902.1 4051599 4053953 D PFAM: Organic solvent tolerance protein; OstA family protein; KEGG: ebd:ECBD_3561 organic solvent tolerance protein; organic solvent tolerance protein 4051599..4053953 Escherichia coli KO11FL 11778508 YP_005279496.1 CDS EKO11_3859 NC_016902.1 4054006 4055292 D PFAM: SurA domain; PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: sbo:SBO_0042 peptidyl-prolyl cis-trans isomerase SurA; SurA domain-containing protein 4054006..4055292 Escherichia coli KO11FL 11778509 YP_005279497.1 CDS EKO11_3860 NC_016902.1 4055292 4056281 D TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: eok:G2583_0056 4-hydroxythreonine-4-phosphate dehydrogenase (4-(phosphohydroxy)-L-threonine dehydrogenase); PFAM: Pyridoxal phosphate biosynthetic protein PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase 4055292..4056281 Escherichia coli KO11FL 11778510 YP_005279498.1 CDS EKO11_3861 NC_016902.1 4056278 4057099 D TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; KEGG: sbo:SBO_0040 dimethyladenosine transferase; SMART: Ribosomal RNA adenine methylase transferase-like; dimethyladenosine transferase 4056278..4057099 Escherichia coli KO11FL 11778511 YP_005279499.1 CDS EKO11_3862 NC_016902.1 4057102 4057479 D PFAM: ApaG domain protein; KEGG: sdy:SDY_0075 ApaG; ApaG protein 4057102..4057479 Escherichia coli KO11FL 11778512 YP_005279500.1 CDS EKO11_3863 NC_016902.1 4057486 4058328 D KEGG: sfv:SFV_0043 diadenosine tetraphosphatase; TIGRFAM: bis(5'-nucleosyl)-tetraphosphatase (symmetrical); PFAM: metallophosphoesterase; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 4057486..4058328 Escherichia coli KO11FL 11778513 YP_005279501.1 CDS EKO11_3864 NC_016902.1 4058406 4058885 R manually curated; KEGG: sbc:SbBS512_E0042 dihydrofolate reductase; PFAM: dihydrofolate reductase region; Dihydrofolate reductase complement(4058406..4058885) Escherichia coli KO11FL 11778514 YP_005279502.1 CDS EKO11_3865 NC_016902.1 4059077 4060939 R KEGG: sbc:SbBS512_E0041 glutathione-regulated potassium-efflux system protein KefC; TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; potassium efflux system protein complement(4059077..4060939) Escherichia coli KO11FL 11778515 YP_005279503.1 CDS EKO11_3866 NC_016902.1 4060932 4061462 R PFAM: NAD(P)H dehydrogenase (quinone); KEGG: ebd:ECBD_3569 glutathione-regulated potassium-efflux system ancillary protein KefF; NAD(P)H dehydrogenase (quinone) complement(4060932..4061462) Escherichia coli KO11FL 11779734 YP_005279504.1 CDS EKO11_3867 NC_016902.1 4061570 4062901 R PFAM: major facilitator superfamily MFS_1; KEGG: ebd:ECBD_3570 major facilitator superfamily MFS_1; major facilitator superfamily protein complement(4061570..4062901) Escherichia coli KO11FL 11778516 YP_005279505.1 CDS EKO11_3868 NC_016902.1 4062960 4063247 R KEGG: sdy:SDY_0066 putative ferredoxin; putative ferredoxin complement(4062960..4063247) Escherichia coli KO11FL 11778517 YP_005279506.1 CDS EKO11_3869 NC_016902.1 4063244 4064530 R PFAM: FAD dependent oxidoreductase; KEGG: ebd:ECBD_3572 putative oxidoreductase FixC; FAD dependent oxidoreductase complement(4063244..4064530) Escherichia coli KO11FL 11778518 YP_005279507.1 CDS EKO11_3870 NC_016902.1 4064581 4065522 R PFAM: Electron transfer flavoprotein alpha subunit ; Electron transfer flavoprotein alpha/beta-subunit; KEGG: ssn:SSON_0050 putative electron transfer flavoprotein FixB; electron transfer flavoprotein subunit alpha complement(4064581..4065522) Escherichia coli KO11FL 11778519 YP_005279508.1 CDS EKO11_3871 NC_016902.1 4065537 4066307 R PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: sfv:SFV_0035 putative electron transfer flavoprotein FixA; electron transfer flavoprotein subunit alpha/beta complement(4065537..4066307) Escherichia coli KO11FL 11779735 YP_005279509.1 CDS EKO11_3872 NC_016902.1 4066781 4068295 D KEGG: ssn:SSON_0048 L-carnitine/gamma-butyrobetaine antiporter; TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; choline/carnitine/betaine transporter 4066781..4068295 Escherichia coli KO11FL 11778520 YP_005279510.1 CDS EKO11_3873 NC_016902.1 4068326 4069468 D PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: sdy:SDY_0061 crotonobetainyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 4068326..4069468 Escherichia coli KO11FL 11778521 YP_005279511.1 CDS EKO11_3874 NC_016902.1 4069597 4070814 D PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: sfx:S0037 crotonobetainyl-CoA:carnitine CoA-transferase; L-carnitine dehydratase/bile acid-inducible protein F 4069597..4070814 Escherichia coli KO11FL 11778522 YP_005279512.1 CDS EKO11_3875 NC_016902.1 4070888 4072441 D PFAM: AMP-dependent synthetase and ligase; KEGG: eoi:ECO111_0038 putative crotonobetaine/carnitine-CoA ligase; AMP-dependent synthetase and ligase 4070888..4072441 Escherichia coli KO11FL 11778523 YP_005279513.1 CDS EKO11_3876 NC_016902.1 4072550 4073335 D PFAM: Enoyl-CoA hydratase/isomerase; KEGG: eoi:ECO111_0037 carnitinyl-CoA dehydratase; Enoyl-CoA hydratase/isomerase 4072550..4073335 Escherichia coli KO11FL 11778524 YP_005279514.1 CDS EKO11_3877 NC_016902.1 4073341 4073931 D KEGG: ssn:SSON_0041 carnitine operon protein CaiE; carnitine operon protein CaiE 4073341..4073931 Escherichia coli KO11FL 11778525 YP_005279515.1 CDS EKO11_3878 NC_016902.1 4074017 4074412 R KEGG: eoh:ECO103_0036 DNA-binding transcriptional activator CaiF; DNA-binding transcriptional activator CaiF complement(4074017..4074412) Escherichia coli KO11FL 11778526 YP_005279516.1 CDS EKO11_3879 NC_016902.1 4074447 4074665 D KEGG: eoh:ECO103_0035 hypothetical protein; hypothetical protein 4074447..4074665 Escherichia coli KO11FL 11778527 YP_005279517.1 CDS EKO11_3880 NC_016902.1 4074673 4077894 R KEGG: sbo:SBO_0032 carbamoyl phosphate synthase large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein; carbamoyl-phosphate synthase large subunit complement(4074673..4077894) Escherichia coli KO11FL 11778528 YP_005279518.1 CDS EKO11_3881 NC_016902.1 4077912 4079060 R KEGG: sbc:SbBS512_E0036 carbamoyl phosphate synthase small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I; carbamoyl-phosphate synthase small subunit complement(4077912..4079060) Escherichia coli KO11FL 11778529 YP_005279519.1 CDS EKO11_3882 NC_016902.1 4079516 4080337 R KEGG: enc:ECL_00838 hypothetical protein; TIGRFAM: dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase; dihydrodipicolinate reductase complement(4079516..4080337) Escherichia coli KO11FL 11778530 YP_005279520.1 CDS EKO11_3883 NC_016902.1 4080504 4081418 R PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: eoh:ECO103_0031 ribonucleoside hydrolase RihC; inosine/uridine-preferring nucleoside hydrolase complement(4080504..4081418) Escherichia coli KO11FL 11778531 YP_005279521.1 CDS EKO11_3884 NC_016902.1 4081484 4082434 R TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; KEGG: sdy:SDY_0051 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; PFAM: LytB protein; hydroxymethylbutenyl pyrophosphate reductase complement(4081484..4082434) Escherichia coli KO11FL 11778532 YP_005279522.1 CDS EKO11_3885 NC_016902.1 4082436 4082885 R KEGG: sbc:SbBS512_E0032 FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase; PFAM: peptidylprolyl isomerase FKBP-type; peptidylprolyl isomerase complement(4082436..4082885) Escherichia coli KO11FL 11778533 YP_005279523.1 CDS EKO11_3886 NC_016902.1 4082973 4083467 R TIGRFAM: lipoprotein signal peptidase; KEGG: sdy:SDY_0049 lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; lipoprotein signal peptidase complement(4082973..4083467) Escherichia coli KO11FL 11778534 YP_005279524.1 CDS EKO11_3887 NC_016902.1 4083467 4086283 R KEGG: ssn:SSON_0031 isoleucyl-tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase complement(4083467..4086283) Escherichia coli KO11FL 11778535 YP_005279525.1 CDS EKO11_3888 NC_016902.1 4086326 4087267 R TIGRFAM: riboflavin biosynthesis protein RibF; KEGG: sbc:SbBS512_E0029 bifunctional riboflavin kinase/FMN adenylyltransferase; PFAM: FAD synthetase; Riboflavin kinase; riboflavin biosynthesis protein RibF complement(4086326..4087267) Escherichia coli KO11FL 11778536 YP_005279526.1 CDS EKO11_3889 NC_016902.1 4087275 4087493 R manually curated; KEGG: sbc:SbBS512_E0028 hypothetical protein; hypothetical protein complement(4087275..4087493) Escherichia coli KO11FL 11778537 YP_005279527.1 CDS EKO11_3890 NC_016902.1 4087596 4087859 D KEGG: sdy:SDY_0045 30S ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20; 30S ribosomal protein S20 4087596..4087859 Escherichia coli KO11FL 11778538 YP_005279528.1 CDS EKO11_3893 NC_016902.1 4091355 4092314 D KEGG: ebd:ECBD_3598 hypothetical protein; hypothetical protein 4091355..4092314 Escherichia coli KO11FL 11778541 YP_005279529.1 CDS EKO11_3894 NC_016902.1 4092353 4093252 R PFAM: regulatory protein LysR; KEGG: sbc:SbBS512_E0020 transcriptional activator NhaR; LysR family transcriptional regulator complement(4092353..4093252) Escherichia coli KO11FL 11779736 YP_005279530.1 CDS EKO11_3895 NC_016902.1 4093318 4094484 R KEGG: ebd:ECBD_3600 pH-dependent sodium/proton antiporter; TIGRFAM: Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter NhaA; Na+/H+ antiporter NhaA complement(4093318..4094484) Escherichia coli KO11FL 11778542 YP_005279531.1 CDS EKO11_3896 NC_016902.1 4095013 4095222 D PFAM: Hok/gef cell toxic protein; KEGG: sbo:SBO_0017 Gef; Hok/gef cell toxic protein 4095013..4095222 Escherichia coli KO11FL 11778543 YP_005279532.1 CDS EKO11_3897 NC_016902.1 4095326 4096456 R TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; DnaJ central domain protein; heat shock protein DnaJ domain protein; KEGG: ssn:SSON_0015 chaperone protein DnaJ; SMART: heat shock protein DnaJ domain protein; chaperone protein DnaJ complement(4095326..4096456) Escherichia coli KO11FL 11779737 YP_005279533.1 CDS EKO11_3898 NC_016902.1 4096545 4098461 R KEGG: sdy:SDY_0013 molecular chaperone DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70; chaperone protein DnaK complement(4096545..4098461) Escherichia coli KO11FL 11778544 YP_005279534.1 CDS EKO11_3899 NC_016902.1 4098838 4099242 D KEGG: eoh:ECO103_0013 hypothetical protein; hypothetical protein 4098838..4099242 Escherichia coli KO11FL 11778545 YP_005279535.1 CDS EKO11_3900 NC_016902.1 4099268 4099981 D KEGG: eoi:ECO111_0011 hypothetical protein; hypothetical protein 4099268..4099981 Escherichia coli KO11FL 11778546 YP_005279536.1 CDS EKO11_3901 NC_016902.1 4100130 4100696 D PFAM: GPR1/FUN34/yaaH family protein; KEGG: ssn:SSON_0011 hypothetical protein; GPR1/FUN34/yaaH family protein 4100130..4100696 Escherichia coli KO11FL 11778547 YP_005279537.1 CDS EKO11_3902 NC_016902.1 4100731 4101318 R KEGG: sbc:SbBS512_E0009 molybdenum cofactor biosynthesis protein MogA; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; molybdenum cofactor synthesis domain-containing protein complement(4100731..4101318) Escherichia coli KO11FL 11778548 YP_005279538.1 CDS EKO11_3903 NC_016902.1 4101433 4102386 R KEGG: sbc:SbBS512_E0008 transaldolase B; TIGRFAM: transaldolase; PFAM: Transaldolase; transaldolase complement(4101433..4102386) Escherichia coli KO11FL 11778549 YP_005279539.1 CDS EKO11_3904 NC_016902.1 4102665 4104095 D KEGG: eoh:ECO103_0008 putative transporter; TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; amino acid carrier protein 4102665..4104095 Escherichia coli KO11FL 11778550 YP_005279540.1 CDS EKO11_3905 NC_016902.1 4104165 4104941 D PFAM: protein of unknown function DUF328; KEGG: ebd:ECBD_3612 hypothetical protein; hypothetical protein 4104165..4104941 Escherichia coli KO11FL 11778551 YP_005279541.1 CDS EKO11_3906 NC_016902.1 4105133 4106113 R PFAM: transposase IS116/IS110/IS902 family protein; KEGG: eoh:ECO103_4940 putative IS621 transposase; transposase IS116/IS110/IS902 family protein complement(4105133..4106113) Escherichia coli KO11FL 11778552 YP_005279542.1 CDS EKO11_3907 NC_016902.1 4106373 4106669 R PFAM: Protein of unknown function DUF2502; KEGG: ssn:SSON_0005 hypothetical protein; hypothetical protein complement(4106373..4106669) Escherichia coli KO11FL 11778553 YP_005279543.1 CDS EKO11_3908 NC_016902.1 4106883 4108169 R TIGRFAM: threonine synthase; KEGG: sdy:SDY_0004 threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; threonine synthase complement(4106883..4108169) Escherichia coli KO11FL 11778554 YP_005279544.1 CDS EKO11_3909 NC_016902.1 4108170 4109102 R KEGG: sdy:SDY_0003 homoserine kinase; TIGRFAM: homoserine kinase; PFAM: GHMP kinase; GHMP kinase domain protein; homoserine kinase complement(4108170..4109102) Escherichia coli KO11FL 11778555 YP_005279545.1 CDS EKO11_3910 NC_016902.1 4109104 4111566 R KEGG: ebd:ECBD_3616 bifunctional aspartokinase I/homeserine dehydrogenase I; TIGRFAM: aspartate kinase; PFAM: homoserine dehydrogenase; aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding; aspartate kinase complement(4109104..4111566) Escherichia coli KO11FL 11778556 YP_005279546.1 CDS EKO11_3911 NC_016902.1 4111926 4112612 R KEGG: sfl:SF4434 putative RNA methyltransferase; TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA methyltransferase, TrmH family, group 1 complement(4111926..4112612) Escherichia coli KO11FL 11778557 YP_005279547.1 CDS EKO11_3912 NC_016902.1 4113248 4113964 D KEGG: sdy:SDY_4662 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; two component transcriptional regulator, winged helix family 4113248..4113964 Escherichia coli KO11FL 11778558 YP_005279548.1 CDS EKO11_3913 NC_016902.1 4114024 4115376 R PFAM: Inner membrane CreD family protein; KEGG: ebd:ECBD_3620 hypothetical protein; Inner membrane CreD family protein complement(4114024..4115376) Escherichia coli KO11FL 11778559 YP_005279549.1 CDS EKO11_3914 NC_016902.1 4115434 4116858 R KEGG: eoh:ECO103_5260 sensory histidine kinase CreC; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; integral membrane sensor signal transduction histidine kinase complement(4115434..4116858) Escherichia coli KO11FL 11779738 YP_005279550.1 CDS EKO11_3915 NC_016902.1 4116858 4117547 R KEGG: eoi:ECO111_5259 DNA-binding response regulator CreB; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; two component transcriptional regulator, winged helix family complement(4116858..4117547) Escherichia coli KO11FL 11778560 YP_005279551.1 CDS EKO11_3916 NC_016902.1 4117560 4118033 R PFAM: CreA family protein; KEGG: sdy:SDY_4658 hypothetical protein; CreA family protein complement(4117560..4118033) Escherichia coli KO11FL 11778561 YP_005279552.1 CDS EKO11_3917 NC_016902.1 4118244 4119113 D KEGG: sbc:SbBS512_E4943 right origin-binding protein; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 4118244..4119113 Escherichia coli KO11FL 11778562 YP_005279553.1 CDS EKO11_3918 NC_016902.1 4119110 4119757 R PFAM: Phosphoglycerate mutase; KEGG: ssn:SSON_4545 phosphoglycerate mutase; phosphoglycerate mutase complement(4119110..4119757) Escherichia coli KO11FL 11778563 YP_005279554.1 CDS EKO11_3919 NC_016902.1 4119809 4120321 D PFAM: protein of unknown function DUF84; KEGG: ebd:ECBD_3626 NTPase; hypothetical protein 4119809..4120321 Escherichia coli KO11FL 11778564 YP_005279555.1 CDS EKO11_3920 NC_016902.1 4120363 4120689 R manually curated; TIGRFAM: trp operon repressor; KEGG: sdy:SDY_4654 Trp operon repressor; PFAM: Trp repressor; Trp operon repressor complement(4120363..4120689) Escherichia coli KO11FL 11778565 YP_005279556.1 CDS EKO11_3921 NC_016902.1 4120779 4122716 R PFAM: Lytic transglycosylase catalytic; KEGG: sbo:SBO_4455 lytic murein transglycosylase; lytic transglycosylase complement(4120779..4122716) Escherichia coli KO11FL 11778566 YP_005279557.1 CDS EKO11_3922 NC_016902.1 4122927 4124594 D KEGG: sdy:SDY_4652 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 4122927..4124594 Escherichia coli KO11FL 11778567 YP_005279558.1 CDS EKO11_3923 NC_016902.1 4124701 4124850 R manually curated; KEGG: sbc:SbBS512_E4938 hypothetical protein; hypothetical protein complement(4124701..4124850) Escherichia coli KO11FL 11778568 YP_005279559.1 CDS EKO11_3924 NC_016902.1 4124901 4126133 R TIGRFAM: nicotinamide-nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: helix-turn-helix domain protein; KEGG: sbc:SbBS512_E4937 nicotinamide-nucleotide adenylyltransferase; SMART: helix-turn-helix domain protein; transcriptional regulator, XRE family complement(4124901..4126133) Escherichia coli KO11FL 11778569 YP_005279560.1 CDS EKO11_3925 NC_016902.1 4126154 4127536 R KEGG: sdy:SDY_4650 DNA repair protein RadA; TIGRFAM: DNA repair protein RadA; SMART: AAA ATPase; DNA repair protein RadA complement(4126154..4127536) Escherichia coli KO11FL 11778570 YP_005279561.1 CDS EKO11_3926 NC_016902.1 4127585 4128640 R PFAM: Haloacid dehalogenase domain protein hydrolase; manually curated; KEGG: sbc:SbBS512_E4935 phosphoserine phosphatase; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like); phosphoserine phosphatase SerB complement(4127585..4128640) Escherichia coli KO11FL 11778571 YP_005279562.1 CDS EKO11_3927 NC_016902.1 4128659 4129303 D PFAM: Virulence factor, haemolysin regulator; KEGG: sbo:SBO_4450 hypothetical protein; Virulence factor, hemolysin regulator 4128659..4129303 Escherichia coli KO11FL 11778572 YP_005279563.1 CDS EKO11_3928 NC_016902.1 4129331 4130347 D KEGG: eoh:ECO103_5247 lipoate-protein ligase A; TIGRFAM: lipoyltransferase and lipoate-protein ligase; PFAM: biotin/lipoate A/B protein ligase; Lipoate protein ligase-like; lipoyltransferase and lipoate-protein ligase 4129331..4130347 Escherichia coli KO11FL 11778573 YP_005279564.1 CDS EKO11_3930 NC_016902.1 4130803 4131522 R KEGG: sbc:SbBS512_E4931 purine nucleoside phosphorylase; TIGRFAM: purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1; purine nucleoside phosphorylase complement(4130803..4131522) Escherichia coli KO11FL 11778575 YP_005279565.1 CDS EKO11_3931 NC_016902.1 4131602 4132825 R TIGRFAM: phosphopentomutase; KEGG: sbc:SbBS512_E4930 phosphopentomutase; PFAM: metalloenzyme domain protein; phosphopentomutase complement(4131602..4132825) Escherichia coli KO11FL 11778576 YP_005279566.1 CDS EKO11_3932 NC_016902.1 4132877 4134199 R TIGRFAM: thymidine phosphorylase; pyrimidine-nucleoside phosphorylase; KEGG: sbc:SbBS512_E4929 thymidine phosphorylase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; Pyrimidine nucleoside phosphorylase domain; thymidine phosphorylase complement(4132877..4134199) Escherichia coli KO11FL 11778577 YP_005279567.1 CDS EKO11_3933 NC_016902.1 4134326 4135105 R TIGRFAM: deoxyribose-phosphate aldolase; KEGG: sdy:SDY_4641 deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; deoxyribose-phosphate aldolase complement(4134326..4135105) Escherichia coli KO11FL 11778578 YP_005279568.1 CDS EKO11_3934 NC_016902.1 4135363 4136913 D KEGG: ebw:BWG_4072 hypothetical protein; hypothetical protein 4135363..4136913 Escherichia coli KO11FL 11778579 YP_005279569.1 CDS EKO11_3935 NC_016902.1 4136885 4137748 D PFAM: Radical SAM domain protein; KEGG: ssn:SSON_4530 putative activating enzyme; radical SAM protein 4136885..4137748 Escherichia coli KO11FL 11779739 YP_005279570.1 CDS EKO11_3936 NC_016902.1 4137861 4138643 R PFAM: TatD-related deoxyribonuclease; KEGG: eoj:ECO26_5584 putative deoxyribonuclease YjjV; TatD-related deoxyribonuclease complement(4137861..4138643) Escherichia coli KO11FL 11778580 YP_005279571.1 CDS EKO11_3937 NC_016902.1 4138640 4139713 R PFAM: Patatin; KEGG: ssn:SSON_4528 hypothetical protein; patatin complement(4138640..4139713) Escherichia coli KO11FL 11778581 YP_005279572.1 CDS EKO11_3938 NC_016902.1 4139835 4139996 R PFAM: protein of unknown function DUF1328; KEGG: cro:ROD_48991 hypothetical protein; hypothetical protein complement(4139835..4139996) Escherichia coli KO11FL 11778582 YP_005279573.1 CDS EKO11_3939 NC_016902.1 4140123 4140728 R KEGG: ssn:SSON_4526 periplasmic protein; PFAM: transport-associated; SMART: Transport-associated and nodulation region; transport-associated protein complement(4140123..4140728) Escherichia coli KO11FL 11778583 YP_005279574.1 CDS EKO11_3940 NC_016902.1 4141121 4142737 R KEGG: sbc:SbBS512_E4918 peptide chain release factor 3; TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; peptide chain release factor 3 complement(4141121..4142737) Escherichia coli KO11FL 11779740 YP_005279575.1 CDS EKO11_3941 NC_016902.1 4142801 4143478 R KEGG: eoh:ECO103_5158 nucleotidase; TIGRFAM: HAD superfamily (subfamily IA) hydrolase, TIGR02254; HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD superfamily hydrolase complement(4142801..4143478) Escherichia coli KO11FL 11778584 YP_005279576.1 CDS EKO11_3942 NC_016902.1 4143493 4143939 R TIGRFAM: ribosomal-protein-alanine acetyltransferase; KEGG: ssn:SSON_4523 ribosomal-protein-alanine N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; ribosomal-protein-alanine acetyltransferase complement(4143493..4143939) Escherichia coli KO11FL 11778585 YP_005279577.1 CDS EKO11_3943 NC_016902.1 4143908 4144321 R TIGRFAM: DNA polymerase III, psi subunit; KEGG: sdy:SDY_4631 DNA polymerase III subunit psi; PFAM: DNA polymerase III psi subunit; DNA polymerase III subunit psi complement(4143908..4144321) Escherichia coli KO11FL 11778586 YP_005279578.1 CDS EKO11_3944 NC_016902.1 4144424 4145455 D KEGG: ssn:SSON_4521 16S ribosomal RNA m2G1207 methyltransferase; PFAM: Methyltransferase small domain protein; methyltransferase small; rRNA (guanine-N(2)-)-methyltransferase 4144424..4145455 Escherichia coli KO11FL 11778587 YP_005279579.1 CDS EKO11_3945 NC_016902.1 4146084 4146320 R PFAM: protein of unknown function DUF1435; KEGG: eoi:ECO111_5229 hypothetical protein; hypothetical protein complement(4146084..4146320) Escherichia coli KO11FL 11778590 YP_005279580.1 CDS EKO11_3946 NC_016902.1 4146461 4147249 D KEGG: eoi:ECO111_5228 ferric iron reductase involved in ferric hydroximate transport; ferric hydroximate transport ferric iron reductase 4146461..4147249 Escherichia coli KO11FL 11778591 YP_005279581.1 CDS EKO11_3947 NC_016902.1 4147287 4147964 R KEGG: eok:G2583_5168 transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; LuxR family transcriptional regulator complement(4147287..4147964) Escherichia coli KO11FL 11778592 YP_005279582.1 CDS EKO11_3948 NC_016902.1 4147922 4148647 R KEGG: eoi:ECO111_5226 putative DNA-binding transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; LuxR family transcriptional regulator complement(4147922..4148647) Escherichia coli KO11FL 11778593 YP_005279583.1 CDS EKO11_3949 NC_016902.1 4149203 4150036 D KEGG: sbc:SbBS512_E4904 hypothetical protein; manually curated; PFAM: protein of unknown function DUF1212; hypothetical protein 4149203..4150036 Escherichia coli KO11FL 11779742 YP_005279584.1 CDS EKO11_3950 NC_016902.1 4150027 4150500 D KEGG: eoi:ECO111_5224 hypothetical protein; hypothetical protein 4150027..4150500 Escherichia coli KO11FL 11778594 YP_005279585.1 CDS EKO11_3951 NC_016902.1 4150607 4151146 D KEGG: sbc:SbBS512_E4902 primosomal protein DnaI; primosomal protein DnaI 4150607..4151146 Escherichia coli KO11FL 11778595 YP_005279586.1 CDS EKO11_3952 NC_016902.1 4151149 4151886 D SMART: AAA ATPase; KEGG: sbc:SbBS512_E4901 DNA replication protein DnaC; AAA ATPase 4151149..4151886 Escherichia coli KO11FL 11778596 YP_005279587.1 CDS EKO11_3953 NC_016902.1 4151935 4152429 D PFAM: Protein of unknown function DUF2501; KEGG: eoh:ECO103_5144 hypothetical protein; hypothetical protein 4151935..4152429 Escherichia coli KO11FL 11778597 YP_005279588.1 CDS EKO11_3954 NC_016902.1 4152683 4154974 D KEGG: ssn:SSON_4505 phosphoglycerol transferase I; PFAM: sulfatase; phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase 4152683..4154974 Escherichia coli KO11FL 11779743 YP_005279589.1 CDS EKO11_3955 NC_016902.1 4155113 4156135 R PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: ssn:SSON_4504 putative oxidoreductase; alcohol dehydrogenase GroES domain-containing protein complement(4155113..4156135) Escherichia coli KO11FL 11778598 YP_005279590.1 CDS EKO11_3956 NC_016902.1 4156274 4157188 D PFAM: GntR domain protein; regulatory protein GntR HTH; KEGG: eok:G2583_5159 transcriptional regulator, GntR family; GntR family transcriptional regulator 4156274..4157188 Escherichia coli KO11FL 11779744 YP_005279591.1 CDS EKO11_3957 NC_016902.1 4157403 4158764 D PFAM: major facilitator superfamily MFS_1; KEGG: eoh:ECO103_5140 putative transporter; major facilitator superfamily protein 4157403..4158764 Escherichia coli KO11FL 11778599 YP_005279592.1 CDS EKO11_3958 NC_016902.1 4158813 4160477 R KEGG: eok:G2583_5157 methyl-accepting chemotaxis protein I; PFAM: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; methyl-accepting chemotaxis sensory transducer complement(4158813..4160477) Escherichia coli KO11FL 11778600 YP_005279593.1 CDS EKO11_3959 NC_016902.1 4160596 4161093 R SMART: regulatory protein MarR; manually curated; KEGG: sfv:SFV_4385 regulator of the 4HPA-hydroxylase operon; TIGRFAM: homoprotocatechuate degradation operon regulator, HpaR; PFAM: regulatory protein MarR; MarR family transcriptional regulator complement(4160596..4161093) Escherichia coli KO11FL 11778601 YP_005279594.1 CDS EKO11_3960 NC_016902.1 4161314 4162603 D TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG1 subunit; KEGG: sfv:SFV_4384 5-oxo-1,2,5-tricarboxilic-3-penten acid decarboxilase/isomerase; PFAM: fumarylacetoacetate (FAA) hydrolase; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase subunit HpaG2 4161314..4162603 Escherichia coli KO11FL 11778602 YP_005279595.1 CDS EKO11_3961 NC_016902.1 4162600 4164066 D KEGG: sbc:SbBS512_E4889 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 4162600..4164066 Escherichia coli KO11FL 11779745 YP_005279596.1 CDS EKO11_3962 NC_016902.1 4164068 4164919 D TIGRFAM: 3,4-dihydroxyphenylacetate 2,3-dioxygenase; KEGG: sbc:SbBS512_E4888 3,4-dihydroxyphenylacetate 2,3-dioxygenase; PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; 3,4-dihydroxyphenylacetate 2,3-dioxygenase 4164068..4164919 Escherichia coli KO11FL 11778603 YP_005279597.1 CDS EKO11_3963 NC_016902.1 4164929 4165309 D KEGG: sbc:SbBS512_E4887 5-carboxymethyl-2-hydroxymuconate delta isomerase; PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 4164929..4165309 Escherichia coli KO11FL 11778604 YP_005279598.1 CDS EKO11_3964 NC_016902.1 4165420 4166223 D TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; KEGG: ssn:SSON_4495 2-oxo-hept-3-ene-1,7-dioate hydratase; PFAM: fumarylacetoacetate (FAA) hydrolase; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase 4165420..4166223 Escherichia coli KO11FL 11778605 YP_005279599.1 CDS EKO11_3965 NC_016902.1 4166234 4167022 D TIGRFAM: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; KEGG: eoi:ECO111_5209 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PFAM: HpcH/HpaI aldolase; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 4166234..4167022 Escherichia coli KO11FL 11778606 YP_005279600.1 CDS EKO11_3966 NC_016902.1 4167197 4168573 D KEGG: sbo:SBO_4406 putative 4-hydroxyphenylacetate permease; TIGRFAM: 4-hydroxyphenylacetate transporter; PFAM: major facilitator superfamily MFS_1; 4-hydroxyphenylacetate transporter 4167197..4168573 Escherichia coli KO11FL 11779746 YP_005279601.1 CDS EKO11_3967 NC_016902.1 4168583 4169473 D TIGRFAM: 4-hydroxyphenylacetate catabolism regulatory protein HpaA; PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; KEGG: ebd:ECBD_3673 transcriptional regulator, AraC family; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 4168583..4169473 Escherichia coli KO11FL 11778607 YP_005279602.1 CDS EKO11_3968 NC_016902.1 4169724 4171286 D KEGG: efe:EFER_3070 4-hydroxyphenylacetate 3-monooxygenase large component; TIGRFAM: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit; PFAM: 4-hydroxyphenylacetate 3-hydroxylase; 4-hydroxyphenylacetate 3-monooxygenase oxygenase subunit 4169724..4171286 Escherichia coli KO11FL 11778608 YP_005279603.1 CDS EKO11_3969 NC_016902.1 4171304 4171816 D KEGG: sbc:SbBS512_E4881 4-hydroxyphenylacetate 3-monooxygenase, reductase component; TIGRFAM: 4-hydroxyphenylacetate 3-monooxygenase, reductase subunit; PFAM: flavin reductase domain protein FMN-binding; 4-hydroxyphenylacetate 3-monooxygenase, reductase subunit 4171304..4171816 Escherichia coli KO11FL 11778609 YP_005279604.1 CDS EKO11_3970 NC_016902.1 4172209 4174359 D PFAM: carbon starvation protein CstA; KEGG: sbc:SbBS512_E4880 carbon starvation family protein; carbon starvation protein CstA 4172209..4174359 Escherichia coli KO11FL 11778610 YP_005279605.1 CDS EKO11_3971 NC_016902.1 4174409 4174612 D PFAM: protein of unknown function DUF466; KEGG: sdy:SDY_4606 hypothetical protein; hypothetical protein 4174409..4174612 Escherichia coli KO11FL 11778611 YP_005279606.1 CDS EKO11_3972 NC_016902.1 4174623 4175579 D PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: eoh:ECO103_5124 putative GTP-binding protein YjiA; cobalamin synthesis protein P47K 4174623..4175579 Escherichia coli KO11FL 11778612 YP_005279607.1 CDS EKO11_3973 NC_016902.1 4175657 4178197 R KEGG: eoh:ECO103_5123 penicillin G acylase precursor; PFAM: peptidase S45 penicillin amidase; penicillin amidase complement(4175657..4178197) Escherichia coli KO11FL 11779747 YP_005279608.1 CDS EKO11_3974 NC_016902.1 4178549 4178713 R KEGG: eoh:ECO103_5122 hypothetical protein; hypothetical protein complement(4178549..4178713) Escherichia coli KO11FL 11778613 YP_005279609.1 CDS EKO11_3975 NC_016902.1 4178845 4180257 D KEGG: eoh:ECO103_5121 fused putative DNA-binding transcriptional regulator/putative amino transferase; PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; DeoR family transcriptional regulator 4178845..4180257 Escherichia coli KO11FL 11778614 YP_005279610.1 CDS EKO11_3976 NC_016902.1 4180499 4181443 R PFAM: transposase YhgA family protein; KEGG: eoj:ECO26_5535 hypothetical protein; transposase YhgA family protein complement(4180499..4181443) Escherichia coli KO11FL 11778615 YP_005279611.1 CDS EKO11_3977 NC_016902.1 4181910 4183142 D PFAM: major facilitator superfamily MFS_1; KEGG: eoi:ECO111_5194 multidrug efflux system protein; major facilitator superfamily protein 4181910..4183142 Escherichia coli KO11FL 11778616 YP_005279612.1 CDS EKO11_3978 NC_016902.1 4183183 4184463 D PFAM: protein of unknown function DUF445; KEGG: eoh:ECO103_5118 hypothetical protein; hypothetical protein 4183183..4184463 Escherichia coli KO11FL 11778617 YP_005279613.1 CDS EKO11_3979 NC_016902.1 4184579 4185730 D PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: eoj:ECO26_5532 putative 2-hydroxyglutaryl-CoA dehydratase; 2-hydroxyglutaryl-CoA dehydratase subunit D 4184579..4185730 Escherichia coli KO11FL 11778618 YP_005279614.1 CDS EKO11_3980 NC_016902.1 4185740 4186507 D TIGRFAM: CoA-substrate-specific enzyme activase; KEGG: sbc:SbBS512_E4770 (R)-2-hydroxyglutaryl-CoA dehydratase activator; PFAM: ATPase BadF/BadG/BcrA/BcrD type; CoA-substrate-specific enzyme activase 4185740..4186507 Escherichia coli KO11FL 11778619 YP_005279615.1 CDS EKO11_3981 NC_016902.1 4186504 4186761 D KEGG: eoh:ECO103_5115 hypothetical protein; hypothetical protein 4186504..4186761 Escherichia coli KO11FL 11778620 YP_005279616.1 CDS EKO11_3982 NC_016902.1 4186715 4187686 D PFAM: SdiA-regulated domain protein; KEGG: sbo:SBO_4384 hypothetical protein; SdiA-regulated domain-containing protein 4186715..4187686 Escherichia coli KO11FL 11778621 YP_005279617.1 CDS EKO11_3983 NC_016902.1 4187754 4188932 D KEGG: eoh:ECO103_5113 putative inner membrane protein; putative inner membrane protein 4187754..4188932 Escherichia coli KO11FL 11778622 YP_005279618.1 CDS EKO11_3984 NC_016902.1 4188945 4189499 R PFAM: phosphotransferase KptA/Tpt1; KEGG: eoh:ECO103_5112 RNA 2'-phosphotransferase-like protein; phosphotransferase KptA/Tpt1 complement(4188945..4189499) Escherichia coli KO11FL 11778623 YP_005279619.1 CDS EKO11_3985 NC_016902.1 4189749 4190432 D PFAM: nucleoside recognition domain protein; KEGG: sbc:SbBS512_E4775 putative transporter; nucleoside recognition domain-containing protein 4189749..4190432 Escherichia coli KO11FL 11778624 YP_005279620.1 CDS EKO11_3986 NC_016902.1 4190429 4190890 D PFAM: nucleoside recognition domain protein; KEGG: sbo:SBO_4380 hypothetical protein; nucleoside recognition domain-containing protein 4190429..4190890 Escherichia coli KO11FL 11778625 YP_005279621.1 CDS EKO11_3987 NC_016902.1 4190903 4192075 D KEGG: eoi:ECO111_5184 isoaspartyl dipeptidase; TIGRFAM: isoaspartyl dipeptidase; PFAM: amidohydrolase; isoaspartyl dipeptidase 4190903..4192075 Escherichia coli KO11FL 11778626 YP_005279622.1 CDS EKO11_3988 NC_016902.1 4192140 4193051 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebd:ECBD_3704 putative DNA-binding transcriptional regulator; LysR family transcriptional regulator 4192140..4193051 Escherichia coli KO11FL 11778627 YP_005279623.1 CDS EKO11_3989 NC_016902.1 4193044 4193436 R PFAM: GPW/gp25 family protein; KEGG: eoi:ECO111_5182 DNA replication/recombination/repair protein; GPW/gp25 family protein complement(4193044..4193436) Escherichia coli KO11FL 11778628 YP_005279624.1 CDS EKO11_3990 NC_016902.1 4194109 4194939 D KEGG: eoi:ECO111_5181 hypothetical protein; hypothetical protein 4194109..4194939 Escherichia coli KO11FL 11778629 YP_005279625.1 CDS EKO11_3991 NC_016902.1 4195080 4195853 R manually curated; PFAM: GntR domain protein; regulatory protein GntR HTH; KEGG: sbc:SbBS512_E4789 DNA-binding transcriptional repressor UxuR; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator complement(4195080..4195853) Escherichia coli KO11FL 11778630 YP_005279626.1 CDS EKO11_3992 NC_016902.1 4196068 4197528 R PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: eoi:ECO111_5179 D-mannonate oxidoreductase UxuB, NAD-binding; mannitol dehydrogenase domain-containing protein complement(4196068..4197528) Escherichia coli KO11FL 11778631 YP_005279627.1 CDS EKO11_3993 NC_016902.1 4197609 4198793 R TIGRFAM: mannonate dehydratase; KEGG: eoh:ECO103_5103 mannonate dehydratase; PFAM: Mannonate dehydratase; mannonate dehydratase complement(4197609..4198793) Escherichia coli KO11FL 11778632 YP_005279628.1 CDS EKO11_3994 NC_016902.1 4199133 4200476 D KEGG: ebd:ECBD_3714 fructuronate transporter; TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; gluconate transporter 4199133..4200476 Escherichia coli KO11FL 11778633 YP_005279629.1 CDS EKO11_3995 NC_016902.1 4200719 4201621 R PFAM: FimH mannose-binding protein; Fimbrial protein domain-containing protein; KEGG: eok:G2583_5121 adhesin; FimH mannose-binding protein complement(4200719..4201621) Escherichia coli KO11FL 11778634 YP_005279630.1 CDS EKO11_3996 NC_016902.1 4201641 4202144 R PFAM: Fimbrial protein domain-containing protein; KEGG: eok:G2583_5120 FimG; fimbrial protein domain-containing protein complement(4201641..4202144) Escherichia coli KO11FL 11778635 YP_005279631.1 CDS EKO11_3997 NC_016902.1 4202157 4202687 R PFAM: Fimbrial protein domain-containing protein; KEGG: sbo:SBO_4368 fimbrial morphology; fimbrial protein domain-containing protein complement(4202157..4202687) Escherichia coli KO11FL 11778636 YP_005279632.1 CDS EKO11_3998 NC_016902.1 4202697 4205333 R PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: eoh:ECO103_5098 outer membrane usher protein FimD; fimbrial biogenesis outer membrane usher protein complement(4202697..4205333) Escherichia coli KO11FL 11778637 YP_005279633.1 CDS EKO11_3999 NC_016902.1 4205400 4206125 R PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: ebd:ECBD_3719 pili assembly chaperone, N-terminal; Pili assembly chaperone, N-terminal protein complement(4205400..4206125) Escherichia coli KO11FL 11779748 YP_005279634.1 CDS EKO11_4000 NC_016902.1 4206162 4206701 R KEGG: ebd:ECBD_3720 fimbrial protein; manually curated; PFAM: Fimbrial protein domain-containing protein; fimbrial protein domain-containing protein complement(4206162..4206701) Escherichia coli KO11FL 11778638 YP_005279635.1 CDS EKO11_4001 NC_016902.1 4206766 4207314 R PFAM: Fimbrial protein domain-containing protein; KEGG: eoi:ECO111_5168 major type 1 subunit fimbrin (pilin) FimA; fimbrial protein domain-containing protein complement(4206766..4207314) Escherichia coli KO11FL 11778639 YP_005279636.1 CDS EKO11_4002 NC_016902.1 4207794 4208390 R PFAM: integrase family protein; KEGG: sfx:S4466 tyrosine recombinase; integrase family protein complement(4207794..4208390) Escherichia coli KO11FL 11779749 YP_005279637.1 CDS EKO11_4003 NC_016902.1 4208868 4209470 R PFAM: integrase family protein; KEGG: eok:G2583_5113 type 1 fimbriae regulatory protein FimB; integrase family protein complement(4208868..4209470) Escherichia coli KO11FL 11778640 YP_005279638.1 CDS EKO11_4005 NC_016902.1 4210926 4211642 D PFAM: Oligogalacturonate-specific porin; KEGG: ssn:SSON_4473 hypothetical protein; Oligogalacturonate-specific porin 4210926..4211642 Escherichia coli KO11FL 11778642 YP_005279639.1 CDS EKO11_4006 NC_016902.1 4211662 4212768 D KEGG: eoi:ECO111_5164 N-acetylneuraminic acid mutarotase; TIGRFAM: mutatrotase, YjhT family; PFAM: Kelch repeat type 1-containing protein; Kelch repeat type 2-containing protein; mutarotase, YjhT family 4211662..4212768 Escherichia coli KO11FL 11778643 YP_005279640.1 CDS EKO11_4007 NC_016902.1 4212833 4213813 D PFAM: protein of unknown function DUF303 acetylesterase; KEGG: eoh:ECO103_5090 hypothetical protein; hypothetical protein 4212833..4213813 Escherichia coli KO11FL 11778644 YP_005279641.1 CDS EKO11_4008 NC_016902.1 4214025 4214897 D KEGG: eoi:ECO111_5162 putative restriction endonuclease; putative restriction endonuclease 4214025..4214897 Escherichia coli KO11FL 11778645 YP_005279642.1 CDS EKO11_4009 NC_016902.1 4215067 4217142 D KEGG: efe:EFER_3105 putative 5-methylcytosine-specific restriction enzyme with GTPase activity; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATPase 4215067..4217142 Escherichia coli KO11FL 11778646 YP_005279643.1 CDS EKO11_4010 NC_016902.1 4217135 4218478 D PFAM: 5-methylcytosine restriction system component-like protein; KEGG: efe:EFER_3104 putative 5-methylcytosine restriction system component; 5-methylcytosine restriction system component-like protein 4217135..4218478 Escherichia coli KO11FL 11778647 YP_005279644.1 CDS EKO11_4011 NC_016902.1 4218475 4218861 D KEGG: efe:EFER_3103 hypothetical protein; hypothetical protein 4218475..4218861 Escherichia coli KO11FL 11778648 YP_005279645.1 CDS EKO11_4012 NC_016902.1 4218912 4221059 D PFAM: N-6 DNA methylase; KEGG: efe:EFER_3102 putative type I restriction-modification system methyltransferase subunit; N-6 DNA methylase 4218912..4221059 Escherichia coli KO11FL 11778649 YP_005279646.1 CDS EKO11_4013 NC_016902.1 4221059 4222585 D KEGG: efe:EFER_3101 putative restriction modification system DNA specificity domain; putative restriction modification system DNA specificity domain protein 4221059..4222585 Escherichia coli KO11FL 11778650 YP_005279647.1 CDS EKO11_4014 NC_016902.1 4222603 4223889 D KEGG: efe:EFER_3100 hypothetical protein; hypothetical protein 4222603..4223889 Escherichia coli KO11FL 11778651 YP_005279648.1 CDS EKO11_4015 NC_016902.1 4223886 4228172 D KEGG: efe:EFER_3099 hypothetical protein; hypothetical protein 4223886..4228172 Escherichia coli KO11FL 11778652 YP_005279649.1 CDS EKO11_4016 NC_016902.1 4228183 4229031 D KEGG: efe:EFER_3098 hypothetical protein; hypothetical protein 4228183..4229031 Escherichia coli KO11FL 11778653 YP_005279650.1 CDS EKO11_4017 NC_016902.1 4229034 4230191 D KEGG: efe:EFER_3097 hypothetical protein; hypothetical protein 4229034..4230191 Escherichia coli KO11FL 11779750 YP_005279651.1 CDS EKO11_4018 NC_016902.1 4230181 4231866 D PFAM: HerA-ATP synthase, barrel domain; KEGG: efe:EFER_3096 putative nucleoside triphosphate hydrolase; HerA-ATP synthase, barrel domain-containing protein 4230181..4231866 Escherichia coli KO11FL 11778654 YP_005279652.1 CDS EKO11_4019 NC_016902.1 4231874 4232416 D KEGG: efe:EFER_3095 hypothetical protein; hypothetical protein 4231874..4232416 Escherichia coli KO11FL 11778655 YP_005279653.1 CDS EKO11_4020 NC_016902.1 4232413 4233882 D KEGG: efe:EFER_3094 putative protein kinase from phage origin; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; serine/threonine protein kinase 4232413..4233882 Escherichia coli KO11FL 11779751 YP_005279654.1 CDS EKO11_4021 NC_016902.1 4234082 4235347 R PFAM: integrase family protein; KEGG: kpe:KPK_4978 site-specific recombinase, phage integrase family; integrase family protein complement(4234082..4235347) Escherichia coli KO11FL 11778656 YP_005279655.1 CDS EKO11_4022 NC_016902.1 4235740 4236687 R PFAM: Domain of unknown function DUF1814; KEGG: pay:PAU_03952 hypothetical protein; hypothetical protein complement(4235740..4236687) Escherichia coli KO11FL 11779752 YP_005279656.1 CDS EKO11_4023 NC_016902.1 4236680 4237075 R KEGG: pay:PAU_03953 hypothetical protein; hypothetical protein complement(4236680..4237075) Escherichia coli KO11FL 11778657 YP_005279657.1 CDS EKO11_4024 NC_016902.1 4237145 4237978 R KEGG: plu:plu0136 hypothetical protein; hypothetical protein complement(4237145..4237978) Escherichia coli KO11FL 11778658 YP_005279658.1 CDS EKO11_4025 NC_016902.1 4238093 4238434 R PFAM: protein of unknown function DUF1219; KEGG: ebw:BWG_0226 CP4-6 prophage; toxin of the YkfI-YafW toxin-antitoxin system; hypothetical protein complement(4238093..4238434) Escherichia coli KO11FL 11778659 YP_005279659.1 CDS EKO11_4026 NC_016902.1 4238465 4238800 R KEGG: sfx:S3203 putative structural protein; manually curated; PFAM: YagBYeeUYfjZ family protein; YagBYeeUYfjZ family protein complement(4238465..4238800) Escherichia coli KO11FL 11778660 YP_005279660.1 CDS EKO11_4027 NC_016902.1 4238800 4239273 R KEGG: plu:plu0133 hypothetical protein; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC; DNA repair protein RadC complement(4238800..4239273) Escherichia coli KO11FL 11778661 YP_005279661.1 CDS EKO11_4028 NC_016902.1 4239303 4240121 R KEGG: pay:PAU_03958 hypothetical protein; hypothetical protein complement(4239303..4240121) Escherichia coli KO11FL 11778662 YP_005279662.1 CDS EKO11_4029 NC_016902.1 4240357 4241310 R KEGG: sfx:S4826 hypothetical protein; hypothetical protein complement(4240357..4241310) Escherichia coli KO11FL 11778663 YP_005279663.1 CDS EKO11_4030 NC_016902.1 4241903 4242517 D KEGG: eoh:ECO103_4904 hypothetical protein; hypothetical protein 4241903..4242517 Escherichia coli KO11FL 11778664 YP_005279664.1 CDS EKO11_4031 NC_016902.1 4242635 4242853 D PFAM: Prophage CP4-57 regulatory; KEGG: ypy:YPK_3140 phage transcriptional regulator, AlpA; phage transcriptional regulator, AlpA 4242635..4242853 Escherichia coli KO11FL 11778665 YP_005279665.1 CDS EKO11_4032 NC_016902.1 4243074 4243838 R KEGG: ypy:YPK_3135 hypothetical protein; hypothetical protein complement(4243074..4243838) Escherichia coli KO11FL 11778666 YP_005279666.1 CDS EKO11_4033 NC_016902.1 4243851 4244864 R PFAM: GTP-binding protein HSR1-related; KEGG: xbo:XBJ1_1847 putative CP4-6 prophage; GTP-binding factor; GTP-binding protein HSR1-like protein complement(4243851..4244864) Escherichia coli KO11FL 11778667 YP_005279667.1 CDS EKO11_4034 NC_016902.1 4244903 4245586 R KEGG: pwa:Pecwa_1387 regulatory protein DeoR; regulatory protein DeoR complement(4244903..4245586) Escherichia coli KO11FL 11778668 YP_005279668.1 CDS EKO11_4036 NC_016902.1 4246163 4249576 D KEGG: sbc:SbBS512_E4808 type III restriction enzyme, res subunit; PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicase; type III restriction protein res subunit 4246163..4249576 Escherichia coli KO11FL 11778670 YP_005279669.1 CDS EKO11_4037 NC_016902.1 4249640 4251274 D PFAM: N-6 DNA methylase; KEGG: seh:SeHA_C4713 N-6 DNA methylase; N-6 DNA methylase 4249640..4251274 Escherichia coli KO11FL 11778671 YP_005279670.1 CDS EKO11_4038 NC_016902.1 4251283 4252449 D KEGG: mar:MAE_56980 restriction modification system DNA specificity subunit; manually curated; PFAM: restriction modification system DNA specificity domain; restriction modification system DNA specificity domain-containing protein 4251283..4252449 Escherichia coli KO11FL 11778672 YP_005279671.1 CDS EKO11_4039 NC_016902.1 4252644 4254392 D KEGG: pat:Patl_3558 hypothetical protein; hypothetical protein 4252644..4254392 Escherichia coli KO11FL 11778673 YP_005279672.1 CDS EKO11_4040 NC_016902.1 4254385 4254651 D KEGG: pcb:PC000645.03.0 helicase; helicase 4254385..4254651 Escherichia coli KO11FL 11778674 YP_005279673.1 CDS EKO11_4041 NC_016902.1 4254793 4255758 D KEGG: sua:Saut_1187 5'-nucleotidase; PFAM: 5-nucleotidase; 5'-nucleotidase 4254793..4255758 Escherichia coli KO11FL 11779753 YP_005279674.1 CDS EKO11_4042 NC_016902.1 4255836 4256711 R KEGG: stt:t4547 hypothetical protein; hypothetical protein complement(4255836..4256711) Escherichia coli KO11FL 11778675 YP_005279675.1 CDS EKO11_4043 NC_016902.1 4256927 4258195 R PFAM: integrase family protein; KEGG: sbc:SbBS512_E4814 site-specific recombinase, phage integrase family protein; integrase family protein complement(4256927..4258195) Escherichia coli KO11FL 11778676 YP_005279676.1 CDS EKO11_4044 NC_016902.1 4258676 4259695 D PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: ebw:BWG_3975 putative alcohol dehydrogenase, Zn-dependent and NAD(P)-binding; alcohol dehydrogenase GroES domain-containing protein 4258676..4259695 Escherichia coli KO11FL 11778677 YP_005279677.1 CDS EKO11_4045 NC_016902.1 4259699 4260262 R TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; KEGG: ebd:ECBD_3768 D-gluconate kinase; PFAM: shikimate kinase; thermoresistant glucokinase family carbohydrate kinase complement(4259699..4260262) Escherichia coli KO11FL 11778678 YP_005279678.1 CDS EKO11_4046 NC_016902.1 4260479 4261510 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ebd:ECBD_3769 L-idonate 5-dehydrogenase; alcohol dehydrogenase 4260479..4261510 Escherichia coli KO11FL 11778679 YP_005279679.1 CDS EKO11_4047 NC_016902.1 4261534 4262298 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ebd:ECBD_3770 gluconate 5-dehydrogenase; short-chain dehydrogenase/reductase SDR 4261534..4262298 Escherichia coli KO11FL 11778680 YP_005279680.1 CDS EKO11_4048 NC_016902.1 4262363 4263682 D KEGG: ebw:BWG_3971 L-idonate and D-gluconate transporter; TIGRFAM: gluconate transporter; PFAM: Gluconate transporter; gluconate transporter 4262363..4263682 Escherichia coli KO11FL 11778681 YP_005279681.1 CDS EKO11_4049 NC_016902.1 4263749 4264747 D KEGG: ebd:ECBD_3772 transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; LacI family transcriptional regulator 4263749..4264747 Escherichia coli KO11FL 11778682 YP_005279682.1 CDS EKO11_4050 NC_016902.1 4264825 4266327 D PFAM: protein of unknown function DUF853 NPT hydrolase; KEGG: ebd:ECBD_3773 protein of unknown function DUF853 NPT hydrolase putative; hypothetical protein 4264825..4266327 Escherichia coli KO11FL 11778683 YP_005279683.1 CDS EKO11_4051 NC_016902.1 4266446 4267528 R PFAM: permease YjgP/YjgQ family protein; KEGG: ebd:ECBD_3774 permease YjgP/YjgQ family protein; YjgP/YjgQ family permease complement(4266446..4267528) Escherichia coli KO11FL 11778684 YP_005279684.1 CDS EKO11_4052 NC_016902.1 4267528 4268628 R KEGG: sbo:SBO_4179 hypothetical protein; manually curated; PFAM: permease YjgP/YjgQ family protein; YjgP/YjgQ family permease complement(4267528..4268628) Escherichia coli KO11FL 11778685 YP_005279685.1 CDS EKO11_4053 NC_016902.1 4268895 4270406 D KEGG: ssn:SSON_4445 leucyl aminopeptidase; PFAM: peptidase M17 leucyl aminopeptidase domain protein; leucyl aminopeptidase 4268895..4270406 Escherichia coli KO11FL 11778686 YP_005279686.1 CDS EKO11_4054 NC_016902.1 4270540 4270983 D manually curated; KEGG: sdy:SDY_4283 DNA polymerase III subunit chi; PFAM: DNA polymerase III chi subunit HolC; DNA-directed DNA polymerase 4270540..4270983 Escherichia coli KO11FL 11778687 YP_005279687.1 CDS EKO11_4055 NC_016902.1 4270983 4273838 D KEGG: eoh:ECO103_5054 valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase; valyl-tRNA synthetase 4270983..4273838 Escherichia coli KO11FL 11778688 YP_005279688.1 CDS EKO11_4056 NC_016902.1 4273894 4275090 R PFAM: protein of unknown function DUF898 transmembrane; KEGG: eoh:ECO103_5053 hypothetical protein; hypothetical protein complement(4273894..4275090) Escherichia coli KO11FL 11778689 YP_005279689.1 CDS EKO11_4057 NC_016902.1 4275283 4275786 D PFAM: GCN5-related N-acetyltransferase; KEGG: eoi:ECO111_5140 putative acetyltransferase; N-acetyltransferase GCN5 4275283..4275786 Escherichia coli KO11FL 11778690 YP_005279690.1 CDS EKO11_4058 NC_016902.1 4275832 4276248 R PFAM: protein of unknown function DUF1260; KEGG: sdy:SDY_4277 hypothetical protein; hypothetical protein complement(4275832..4276248) Escherichia coli KO11FL 11778691 YP_005279691.1 CDS EKO11_4059 NC_016902.1 4276410 4277414 D TIGRFAM: ornithine carbamoyltransferase; KEGG: sfx:S4496 ornithine carbamoyltransferase subunit I; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; ornithine carbamoyltransferase 4276410..4277414 Escherichia coli KO11FL 11778692 YP_005279692.1 CDS EKO11_4061 NC_016902.1 4279198 4279650 R PFAM: Conserved hypothetical protein CHP00022; KEGG: eok:G2583_5082 hypothetical protein; hypothetical protein complement(4279198..4279650) Escherichia coli KO11FL 11778693 YP_005279693.1 CDS EKO11_4062 NC_016902.1 4279795 4280388 R PFAM: regulatory protein TetR; KEGG: eoh:ECO103_5046 putative transcriptional regulator; regulatory protein TetR complement(4279795..4280388) Escherichia coli KO11FL 11778694 YP_005279694.1 CDS EKO11_4063 NC_016902.1 4280459 4281172 D PFAM: short-chain dehydrogenase/reductase SDR; KEGG: eoh:ECO103_5045 oxidoreductase; short-chain dehydrogenase/reductase SDR 4280459..4281172 Escherichia coli KO11FL 11779756 YP_005279695.1 CDS EKO11_4064 NC_016902.1 4281303 4281698 D PFAM: Endoribonuclease L-PSP; KEGG: ssn:SSON_4428 hypothetical protein; endoribonuclease L-PSP 4281303..4281698 Escherichia coli KO11FL 11778695 YP_005279696.1 CDS EKO11_4065 NC_016902.1 4281952 4282113 D KEGG: etw:ECSP_5348 pyrBI operon leader peptide; manually curated; PFAM: PyrBI operon leader peptide; PyrBI operon leader peptide 4281952..4282113 Escherichia coli KO11FL 11778696 YP_005279697.1 CDS EKO11_4066 NC_016902.1 4282117 4283052 D KEGG: sdy:SDY_4264 aspartate carbamoyltransferase catalytic subunit; TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate carbamoyltransferase 4282117..4283052 Escherichia coli KO11FL 11779757 YP_005279698.1 CDS EKO11_4067 NC_016902.1 4283065 4283526 D KEGG: sbc:SbBS512_E4839 aspartate carbamoyltransferase regulatory subunit; TIGRFAM: aspartate carbamoyltransferase, regulatory subunit; PFAM: Aspartate carbamoyltransferase regulatory subunit-like; aspartate carbamoyltransferase, regulatory subunit 4283065..4283526 Escherichia coli KO11FL 11778697 YP_005279699.1 CDS EKO11_4068 NC_016902.1 4283599 4283985 D KEGG: sdy:SDY_4262 hypothetical protein; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; endoribonuclease L-PSP 4283599..4283985 Escherichia coli KO11FL 11778698 YP_005279700.1 CDS EKO11_4069 NC_016902.1 4284191 4286887 R TIGRFAM: magnesium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; KEGG: ssn:SSON_4423 magnesium-transporting ATPase MgtA; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; magnesium-translocating P-type ATPase complement(4284191..4286887) Escherichia coli KO11FL 11778699 YP_005279701.1 CDS EKO11_4070 NC_016902.1 4287266 4288213 D TIGRFAM: trehalose operon repressor; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: eoh:ECO103_5037 trehalose repressor; SMART: regulatory protein LacI; LacI family transcriptional regulator 4287266..4288213 Escherichia coli KO11FL 11778700 YP_005279702.1 CDS EKO11_4071 NC_016902.1 4288332 4289753 D TIGRFAM: PTS system, trehalose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PTS system, maltose and glucose-specific subfamily, IIC subunit; KEGG: ebd:ECBD_3793 PTS system trehalose(maltose)-specific transporter subunits IIBC; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; PTS system trehalose-specific transporter subunit IIBC 4288332..4289753 Escherichia coli KO11FL 11778701 YP_005279703.1 CDS EKO11_4072 NC_016902.1 4289803 4291458 D TIGRFAM: alpha,alpha-phosphotrehalase; PFAM: alpha amylase catalytic region; KEGG: sfx:S4513 trehalose-6-phosphate hydrolase; SMART: alpha amylase catalytic sub domain; alpha,alpha-phosphotrehalase 4289803..4291458 Escherichia coli KO11FL 11778702 YP_005279704.1 CDS EKO11_4073 NC_016902.1 4291852 4293990 D TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; KEGG: ebd:ECBD_3796 anaerobic ribonucleoside triphosphate reductase; PFAM: formate C-acetyltransferase glycine radical; ATP-cone domain protein; anaerobic ribonucleoside-triphosphate reductase 4291852..4293990 Escherichia coli KO11FL 11778703 YP_005279705.1 CDS EKO11_4074 NC_016902.1 4294148 4294612 D TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; KEGG: ssn:SSON_4418 anaerobic ribonucleotide reductase-activating protein; anaerobic ribonucleoside-triphosphate reductase activating protein 4294148..4294612 Escherichia coli KO11FL 11779758 YP_005279706.1 CDS EKO11_4075 NC_016902.1 4294657 4295043 R PFAM: cytochrome b562; KEGG: sfv:SFV_4255 cytochrome b(562); cytochrome b562 complement(4294657..4295043) Escherichia coli KO11FL 11778704 YP_005279707.1 CDS EKO11_4076 NC_016902.1 4295226 4296578 R PFAM: peptidase U62 modulator of DNA gyrase; KEGG: eok:G2583_5064 putative peptide maturation protein; peptidase U62 modulator of DNA gyrase complement(4295226..4296578) Escherichia coli KO11FL 11778705 YP_005279708.1 CDS EKO11_4077 NC_016902.1 4296672 4297223 D PFAM: protein of unknown function DUF615; KEGG: ssn:SSON_4415 hypothetical protein; hypothetical protein 4296672..4297223 Escherichia coli KO11FL 11779759 YP_005279709.1 CDS EKO11_4078 NC_016902.1 4297379 4298752 R KEGG: ebd:ECBD_3801 UDP-N-acetylmuramate; TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; UDP-N-acetylmuramate complement(4297379..4298752) Escherichia coli KO11FL 11778706 YP_005279710.1 CDS EKO11_4079 NC_016902.1 4298928 4299926 D PFAM: Inositol phosphatase/fructose-16-bisphosphatase; KEGG: sdy:SDY_4250 fructose-1,6-bisphosphatase; inositol phosphatase/fructose-16-bisphosphatase 4298928..4299926 Escherichia coli KO11FL 11778707 YP_005279711.1 CDS EKO11_4080 NC_016902.1 4299959 4300954 R PFAM: inner-membrane translocator; KEGG: ebd:ECBD_3803 inner membrane ABC transporter permease protein YjfF; inner-membrane translocator complement(4299959..4300954) Escherichia coli KO11FL 11778708 YP_005279712.1 CDS EKO11_4081 NC_016902.1 4300941 4301963 R PFAM: inner-membrane translocator; KEGG: eoi:ECO111_5114 putative sugar transporter subunit; inner-membrane translocator complement(4300941..4301963) Escherichia coli KO11FL 11778709 YP_005279713.1 CDS EKO11_4082 NC_016902.1 4301977 4303479 R KEGG: eoh:ECO103_5025 putative sugar transporter subunit; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(4301977..4303479) Escherichia coli KO11FL 11778710 YP_005279714.1 CDS EKO11_4083 NC_016902.1 4303619 4304575 R PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sbc:SbBS512_E4856 putative sugar ABC transporter, periplasmic sugar-binding protein; periplasmic binding protein/LacI transcriptional regulator complement(4303619..4304575) Escherichia coli KO11FL 11778711 YP_005279715.1 CDS EKO11_4084 NC_016902.1 4304885 4305415 D KEGG: ebd:ECBD_3807 inorganic pyrophosphatase; PFAM: Inorganic pyrophosphatase; inorganic diphosphatase 4304885..4305415 Escherichia coli KO11FL 11778712 YP_005279716.1 CDS EKO11_4085 NC_016902.1 4305495 4305845 R KEGG: eok:G2583_5055 PemK protein 2; manually curated; PFAM: PemK family protein; transcriptional modulator of MazE/toxin MazF complement(4305495..4305845) Escherichia coli KO11FL 11778713 YP_005279717.1 CDS EKO11_4086 NC_016902.1 4305839 4306090 R PFAM: SpoVT/AbrB domain-containing protein; KEGG: eoh:ECO103_5021 antitoxin ChpS; transcriptional regulator/antitoxin MazE complement(4305839..4306090) Escherichia coli KO11FL 11778714 YP_005279718.1 CDS EKO11_4087 NC_016902.1 4306303 4306644 R PFAM: AIG2 family protein; KEGG: sdy:SDY_4459 hypothetical protein; AIG2 family protein complement(4306303..4306644) Escherichia coli KO11FL 11778715 YP_005279719.1 CDS EKO11_4088 NC_016902.1 4306647 4310426 R PFAM: protein of unknown function DUF490; KEGG: ssn:SSON_4406 hypothetical protein; hypothetical protein complement(4306647..4310426) Escherichia coli KO11FL 11778716 YP_005279720.1 CDS EKO11_4089 NC_016902.1 4310423 4312156 R PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein; KEGG: sbc:SbBS512_E4861 outer membrane protein, OMP85 family; surface antigen (D15) complement(4310423..4312156) Escherichia coli KO11FL 11778717 YP_005279721.1 CDS EKO11_4090 NC_016902.1 4312362 4313000 D TIGRFAM: peptide methionine sulfoxide reductase; KEGG: ssn:SSON_4404 methionine sulfoxide reductase A; PFAM: Methionine sulfoxide reductase A; peptide methionine sulfoxide reductase 4312362..4313000 Escherichia coli KO11FL 11778718 YP_005279722.1 CDS EKO11_4091 NC_016902.1 4313323 4314666 D PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: ebd:ECBD_3812 protein of unknown function DUF21; hypothetical protein 4313323..4314666 Escherichia coli KO11FL 11778719 YP_005279723.1 CDS EKO11_4092 NC_016902.1 4314728 4314934 R PFAM: protein of unknown function DUF1107; KEGG: sdy:SDY_4454 hypothetical protein; hypothetical protein complement(4314728..4314934) Escherichia coli KO11FL 11778720 YP_005279724.1 CDS EKO11_4093 NC_016902.1 4315259 4315816 D PFAM: Conserved hypothetical protein, YtfJ; KEGG: eoh:ECO103_5014 putative transcriptional regulator; hypothetical protein 4315259..4315816 Escherichia coli KO11FL 11778721 YP_005279725.1 CDS EKO11_4094 NC_016902.1 4315806 4316546 R KEGG: sdy:SDY_4385 adenosine-3'(2'),5'-bisphosphate nucleotidase; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase; 3'(2'),5'-bisphosphate nucleotidase complement(4315806..4316546) Escherichia coli KO11FL 11778722 YP_005279726.1 CDS EKO11_4095 NC_016902.1 4316736 4318679 D KEGG: ebw:BWG_3924 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; TIGRFAM: 2',3'-cyclic-nucleotide 2'-phosphodiesterase; PFAM: 5'-Nucleotidase domain-containing protein; metallophosphoesterase; 2,3-cyclic-nucleotide 2'phosphodiesterase 4316736..4318679 Escherichia coli KO11FL 11778723 YP_005279727.1 CDS EKO11_4096 NC_016902.1 4318808 4319188 R PFAM: helix-turn-helix HxlR type; KEGG: sbc:SbBS512_E4753 putative transcriptional regulator; HxlR family transcriptional regulator complement(4318808..4319188) Escherichia coli KO11FL 11778724 YP_005279728.1 CDS EKO11_4097 NC_016902.1 4319277 4320137 D KEGG: sbo:SBO_4231 putative oxidoreductase; putative oxidoreductase 4319277..4320137 Escherichia coli KO11FL 11778725 YP_005279729.1 CDS EKO11_4098 NC_016902.1 4320246 4321211 D PFAM: protein of unknown function DUF6 transmembrane; KEGG: eoh:ECO103_5009 putative inner membrane protein; hypothetical protein 4320246..4321211 Escherichia coli KO11FL 11778726 YP_005279730.1 CDS EKO11_4099 NC_016902.1 4321319 4321981 D KEGG: sdy:SDY_4379 iron-sulfur cluster repair di-iron protein; TIGRFAM: iron-sulfur cluster repair di-iron protein; PFAM: protein of unknown function DUF542 ScdA domain protein; Hemerythrin HHE cation binding domain protein; iron-sulfur cluster repair di-iron protein 4321319..4321981 Escherichia coli KO11FL 11778727 YP_005279731.1 CDS EKO11_4100 NC_016902.1 4322026 4323438 R PFAM: amino acid permease-associated region; KEGG: sdy:SDY_4378 D-alanine/D-serine/glycine permease; amino acid permease complement(4322026..4323438) Escherichia coli KO11FL 11778728 YP_005279732.1 CDS EKO11_4101 NC_016902.1 4323747 4324367 R KEGG: sfv:SFV_4280 peptidyl-prolyl cis-trans isomerase; PFAM: peptidylprolyl isomerase FKBP-type; FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase complement(4323747..4324367) Escherichia coli KO11FL 11778729 YP_005279733.1 CDS EKO11_4102 NC_016902.1 4324585 4325223 D PFAM: Opacity-associated protein A domain protein; KEGG: sdy:SDY_4376 hypothetical protein; Opacity-associated protein A domain protein 4324585..4325223 Escherichia coli KO11FL 11778730 YP_005279734.1 CDS EKO11_4104 NC_016902.1 4325358 4326506 R KEGG: eoh:ECO103_1983 putative IS609 transposase TnpB; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; transposase, IS605 OrfB family complement(4325358..4326506) Escherichia coli KO11FL 11778732 YP_005279735.1 CDS EKO11_4107 NC_016902.1 4327627 4328421 D KEGG: eoi:ECO111_5010 hypothetical protein; hypothetical protein 4327627..4328421 Escherichia coli KO11FL 11778735 YP_005279736.1 CDS EKO11_4108 NC_016902.1 4328492 4328941 R KEGG: sbc:SbBS512_E4736 50S ribosomal protein L9; TIGRFAM: ribosomal protein L9; PFAM: Ribosomal protein L9-like; 50S ribosomal protein L9 complement(4328492..4328941) Escherichia coli KO11FL 11778736 YP_005279737.1 CDS EKO11_4109 NC_016902.1 4328983 4329210 R KEGG: pam:PANA_3522 RpsR; TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18; 30S ribosomal protein S18 complement(4328983..4329210) Escherichia coli KO11FL 11778737 YP_005279738.1 CDS EKO11_4110 NC_016902.1 4329215 4329529 R PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: sbc:SbBS512_E4734 primosomal replication protein N; ssDNA-binding protein complement(4329215..4329529) Escherichia coli KO11FL 11779760 YP_005279739.1 CDS EKO11_4111 NC_016902.1 4329536 4329931 R KEGG: sdy:SDY_4369 30S ribosomal protein S6; TIGRFAM: ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like; 30S ribosomal protein S6 complement(4329536..4329931) Escherichia coli KO11FL 11778738 YP_005279740.1 CDS EKO11_4112 NC_016902.1 4330258 4330533 D PFAM: protein of unknown function DUF1471; KEGG: sbc:SbBS512_E4732 hypothetical protein; hypothetical protein 4330258..4330533 Escherichia coli KO11FL 11778739 YP_005279741.1 CDS EKO11_4113 NC_016902.1 4330608 4331159 R PFAM: protein of unknown function DUF1440; KEGG: sbo:SBO_4256 hypothetical protein; hypothetical protein complement(4330608..4331159) Escherichia coli KO11FL 11779761 YP_005279742.1 CDS EKO11_4114 NC_016902.1 4331254 4331940 R PFAM: class II aldolase/adducin family protein; KEGG: eok:G2583_5025 L-ribulose-5-phosphate 4-epimerase UlaF; class II aldolase/adducin family protein complement(4331254..4331940) Escherichia coli KO11FL 11778740 YP_005279743.1 CDS EKO11_4115 NC_016902.1 4331940 4332794 R TIGRFAM: hexulose-6-phosphate isomerase; KEGG: sbo:SBO_4258 L-xylulose 5-phosphate 3-epimerase; PFAM: Xylose isomerase domain-containing protein TIM barrel; hexulose-6-phosphate isomerase complement(4331940..4332794) Escherichia coli KO11FL 11778741 YP_005279744.1 CDS EKO11_4116 NC_016902.1 4332804 4333454 R PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: sbo:SBO_4259 3-keto-L-gulonate-6-phosphate decarboxylase; Orotidine 5'-phosphate decarboxylase complement(4332804..4333454) Escherichia coli KO11FL 11779762 YP_005279745.1 CDS EKO11_4117 NC_016902.1 4333468 4333932 R PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: sbo:SBO_4260 L-ascorbate-specific enzyme IIA component of PTS; putative PTS IIA-like nitrogen-regulatory protein PtsN complement(4333468..4333932) Escherichia coli KO11FL 11778742 YP_005279746.1 CDS EKO11_4119 NC_016902.1 4334263 4335717 R manually curated; KEGG: sek:SSPA3900 PTS system ascorbate-specific transporter subunit IIC; PTS system ascorbate-specific transporter subunit IIC complement(4334263..4335717) Escherichia coli KO11FL 11779763 YP_005279747.1 CDS EKO11_4120 NC_016902.1 4336015 4337079 D KEGG: ssn:SSON_4374 putative L-ascorbate 6-phosphate lactonase; putative L-ascorbate 6-phosphate lactonase 4336015..4337079 Escherichia coli KO11FL 11778744 YP_005279748.1 CDS EKO11_4121 NC_016902.1 4337187 4337942 D KEGG: sbc:SbBS512_E4720 transcriptional repressor UlaR; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator 4337187..4337942 Escherichia coli KO11FL 11778745 YP_005279749.1 CDS EKO11_4122 NC_016902.1 4337939 4338688 R KEGG: sbo:SBO_4265 esterase; esterase complement(4337939..4338688) Escherichia coli KO11FL 11779764 YP_005279750.1 CDS EKO11_4123 NC_016902.1 4338870 4339199 D PFAM: protein of unknown function DUF1471; KEGG: sbc:SbBS512_E4719 putative biofilm stress and motility protein A; hypothetical protein 4338870..4339199 Escherichia coli KO11FL 11778746 YP_005279751.1 CDS EKO11_4124 NC_016902.1 4339348 4339623 D PFAM: protein of unknown function DUF1471; KEGG: sbo:SBO_4267 hypothetical protein; hypothetical protein 4339348..4339623 Escherichia coli KO11FL 11778747 YP_005279752.1 CDS EKO11_4125 NC_016902.1 4339740 4341365 R PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: eoh:ECO103_4980 isovaleryl CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein complement(4339740..4341365) Escherichia coli KO11FL 11778748 YP_005279753.1 CDS EKO11_4126 NC_016902.1 4341449 4342612 R PFAM: glutathionylspermidine synthase; KEGG: ebd:ECBD_3848 glutathionylspermidine synthase; glutathionylspermidine synthase complement(4341449..4342612) Escherichia coli KO11FL 11778749 YP_005279754.1 CDS EKO11_4127 NC_016902.1 4342615 4343253 R PFAM: protein of unknown function DUF1190; KEGG: eoh:ECO103_4978 hypothetical protein; hypothetical protein complement(4342615..4343253) Escherichia coli KO11FL 11778750 YP_005279755.1 CDS EKO11_4128 NC_016902.1 4343263 4343661 R PFAM: protein of unknown function DUF350; KEGG: ebd:ECBD_3850 protein of unknown function DUF350; hypothetical protein complement(4343263..4343661) Escherichia coli KO11FL 11778751 YP_005279756.1 CDS EKO11_4129 NC_016902.1 4343679 4344338 R PFAM: Protein of unknown function DUF2491; KEGG: eoh:ECO103_4976 hypothetical protein; hypothetical protein complement(4343679..4344338) Escherichia coli KO11FL 11778752 YP_005279757.1 CDS EKO11_4130 NC_016902.1 4344389 4345087 R PFAM: PspA/IM30 family protein; KEGG: ebd:ECBD_3852 phage shock protein A, PspA; phage shock protein A, PspA complement(4344389..4345087) Escherichia coli KO11FL 11778753 YP_005279758.1 CDS EKO11_4131 NC_016902.1 4345106 4345507 R PFAM: Protein of unknown function DUF2170; KEGG: eoi:ECO111_5033 hypothetical protein; hypothetical protein complement(4345106..4345507) Escherichia coli KO11FL 11778754 YP_005279759.1 CDS EKO11_4132 NC_016902.1 4345634 4346365 R KEGG: ssn:SSON_4365 23S rRNA (guanosine-2'-O-)-methyltransferase; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; TrmH family RNA methyltransferase complement(4345634..4346365) Escherichia coli KO11FL 11778755 YP_005279760.1 CDS EKO11_4133 NC_016902.1 4346545 4348986 R SMART: Cold shock protein; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; KEGG: sfv:SFV_4337 exoribonuclease R; PFAM: ribonuclease II; Ribonuclease B OB region domain; Ribonuclease R winged-helix domain protein; RNA binding S1 domain protein; ribonuclease R complement(4346545..4348986) Escherichia coli KO11FL 11778756 YP_005279761.1 CDS EKO11_4134 NC_016902.1 4349025 4349450 R KEGG: ebd:ECBD_3856 transcriptional repressor NsrR; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; AsnC family transcriptional regulator complement(4349025..4349450) Escherichia coli KO11FL 11778757 YP_005279762.1 CDS EKO11_4135 NC_016902.1 4349655 4350953 R SMART: adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; KEGG: sdy:SDY_4412 adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase; adenylosuccinate synthetase complement(4349655..4350953) Escherichia coli KO11FL 11778758 YP_005279763.1 CDS EKO11_4136 NC_016902.1 4351057 4351254 R PFAM: Protein of unknown function DUF2065; KEGG: sdy:SDY_4413 hypothetical protein; hypothetical protein complement(4351057..4351254) Escherichia coli KO11FL 11778759 YP_005279764.1 CDS EKO11_4137 NC_016902.1 4351336 4352340 R TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: sbc:SbBS512_E4706 FtsH protease regulator HflC; SMART: band 7 protein; HflC protein complement(4351336..4352340) Escherichia coli KO11FL 11778760 YP_005279765.1 CDS EKO11_4138 NC_016902.1 4352343 4353602 R TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: sbc:SbBS512_E4705 FtsH protease regulator HflK; SMART: band 7 protein; HflK protein complement(4352343..4353602) Escherichia coli KO11FL 11778761 YP_005279766.1 CDS EKO11_4139 NC_016902.1 4353688 4354968 R KEGG: ssn:SSON_4358 putative GTPase HflX; TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; GTP-binding proten HflX complement(4353688..4354968) Escherichia coli KO11FL 11779765 YP_005279767.1 CDS EKO11_4140 NC_016902.1 4355044 4355352 R KEGG: sbo:SBO_4284 RNA-binding protein Hfq; TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; RNA chaperone Hfq complement(4355044..4355352) Escherichia coli KO11FL 11778762 YP_005279768.1 CDS EKO11_4141 NC_016902.1 4355438 4356388 R TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: sbo:SBO_4285 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; tRNA delta(2)-isopentenylpyrophosphate transferase complement(4355438..4356388) Escherichia coli KO11FL 11778763 YP_005279769.1 CDS EKO11_4142 NC_016902.1 4356381 4358228 R KEGG: eoh:ECO103_4963 DNA mismatch repair protein; TIGRFAM: DNA mismatch repair protein MutL; PFAM: DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein; MutL dimerisation; DNA mismatch repair protein MutL complement(4356381..4358228) Escherichia coli KO11FL 11778764 YP_005279770.1 CDS EKO11_4143 NC_016902.1 4358238 4359575 R KEGG: ssn:SSON_4354 N-acetylmuramoyl-L-alanine amidase II; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; cell wall hydrolase/autolysin complement(4358238..4359575) Escherichia coli KO11FL 11778765 YP_005279771.1 CDS EKO11_4144 NC_016902.1 4359594 4360055 R PFAM: Uncharacterised protein family UPF0079, ATPase; KEGG: sdy:SDY_4421 putative ATPase; hypothetical protein complement(4359594..4360055) Escherichia coli KO11FL 11778766 YP_005279772.1 CDS EKO11_4145 NC_016902.1 4360027 4361559 R KEGG: ebw:BWG_3879 hypothetical protein; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain-containing protein; carbohydrate kinase complement(4360027..4361559) Escherichia coli KO11FL 11778767 YP_005279773.1 CDS EKO11_4146 NC_016902.1 4361573 4362712 D manually curated; TIGRFAM: iron-sulfur cluster binding protein; KEGG: sbc:SbBS512_E4697 iron-sulfur cluster binding protein; PFAM: domain of unknown function DUF1730; iron-sulfur cluster binding protein 4361573..4362712 Escherichia coli KO11FL 11778768 YP_005279774.1 CDS EKO11_4147 NC_016902.1 4363491 4364036 R KEGG: sdy:SDY_4430 oligoribonuclease; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; Exonuclease RNase T and DNA polymerase III complement(4363491..4364036) Escherichia coli KO11FL 11778772 YP_005279775.1 CDS EKO11_4148 NC_016902.1 4364131 4365183 D KEGG: ebw:BWG_3876 ribosome-associated GTPase; TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; ribosome small subunit-dependent GTPase A 4364131..4365183 Escherichia coli KO11FL 11778773 YP_005279776.1 CDS EKO11_4149 NC_016902.1 4365280 4366248 D KEGG: sbc:SbBS512_E4692 phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related; phosphatidylserine decarboxylase 4365280..4366248 Escherichia coli KO11FL 11778774 YP_005279777.1 CDS EKO11_4150 NC_016902.1 4366270 4369593 D PFAM: MscS Mechanosensitive ion channel; KEGG: ebd:ECBD_3872 hypothetical protein; mechanosensitive ion channel MscS 4366270..4369593 Escherichia coli KO11FL 11778775 YP_005279778.1 CDS EKO11_4151 NC_016902.1 4369622 4369924 R KEGG: eoi:ECO111_5053 hypothetical protein; hypothetical protein complement(4369622..4369924) Escherichia coli KO11FL 11778776 YP_005279779.1 CDS EKO11_4152 NC_016902.1 4369933 4370247 R KEGG: eoi:ECO111_5054 hypothetical protein; hypothetical protein complement(4369933..4370247) Escherichia coli KO11FL 11778777 YP_005279780.1 CDS EKO11_4153 NC_016902.1 4370299 4371843 R KEGG: eok:G2583_4985 hypothetical protein; manually curated; PFAM: amino acid permease-associated region; amino acid permease complement(4370299..4371843) Escherichia coli KO11FL 11778778 YP_005279781.1 CDS EKO11_4154 NC_016902.1 4372020 4372997 R KEGG: sdy:SDY_4399 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase-related protein GenX; PFAM: tRNA synthetase class II (D K and N); lysyl-tRNA synthetase-like protein GenX complement(4372020..4372997) Escherichia coli KO11FL 11778779 YP_005279782.1 CDS EKO11_4155 NC_016902.1 4373322 4373501 D PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: cko:CKO_03678 fumarate reductase flavoprotein subunit; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 4373322..4373501 Escherichia coli KO11FL 11778780 YP_005279783.1 CDS EKO11_4156 NC_016902.1 4373563 4374411 R PFAM: MuA-transposase/repressor protein CI DNA-binding; Mu transposase; KEGG: ebw:BWG_3690 transposase; MuA-transposase/repressor protein CI DNA-binding protein complement(4373563..4374411) Escherichia coli KO11FL 11779766 YP_005279784.1 CDS EKO11_4157 NC_016902.1 4374413 4374640 R KEGG: pay:PAU_01004 putative phage transcriptional regulator; putative transcriptional regulator, Nlp complement(4374413..4374640) Escherichia coli KO11FL 11779767 YP_005279785.1 CDS EKO11_4158 NC_016902.1 4374810 4375400 D PFAM: MuA-transposase/repressor protein CI DNA-binding; KEGG: ebw:BWG_3689 repressor protein CI; MuA-transposase/repressor protein CI DNA-binding protein 4374810..4375400 Escherichia coli KO11FL 11778781 YP_005279786.1 CDS EKO11_4159 NC_016902.1 4375832 4377412 D manually curated; TIGRFAM: fumarate reductase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; KEGG: sdy:SDY_4398 fumarate reductase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; fumarate reductase flavoprotein subunit 4375832..4377412 Escherichia coli KO11FL 11778782 YP_005279787.1 CDS EKO11_4160 NC_016902.1 4377405 4378139 D KEGG: sbc:SbBS512_E4685 fumarate reductase iron-sulfur subunit; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; succinate dehydrogenase and fumarate reductase iron-sulfur protein 4377405..4378139 Escherichia coli KO11FL 11778783 YP_005279788.1 CDS EKO11_4161 NC_016902.1 4378150 4378545 D PFAM: fumarate reductase subunit C; KEGG: sbc:SbBS512_E4684 fumarate reductase subunit C; fumarate reductase subunit C 4378150..4378545 Escherichia coli KO11FL 11778784 YP_005279789.1 CDS EKO11_4162 NC_016902.1 4378556 4378915 D PFAM: fumarate reductase D subunit; KEGG: sdy:SDY_4395 fumarate reductase subunit D; fumarate reductase D subunit 4378556..4378915 Escherichia coli KO11FL 11779768 YP_005279790.1 CDS EKO11_4163 NC_016902.1 4378978 4380111 D PFAM: beta-lactamase; KEGG: ebw:BWG_3865 beta-lactamase; beta-lactamase 4378978..4380111 Escherichia coli KO11FL 11778785 YP_005279791.1 CDS EKO11_4164 NC_016902.1 4380200 4380733 D PFAM: Lipocalin family protein; KEGG: ebd:ECBD_3880 outer membrane lipoprotein Blc; lipocalin family protein 4380200..4380733 Escherichia coli KO11FL 11778786 YP_005279792.1 CDS EKO11_4165 NC_016902.1 4380730 4381197 R KEGG: sbo:SBO_4308 SugE; manually curated; PFAM: small multidrug resistance protein; small multidrug resistance protein complement(4380730..4381197) Escherichia coli KO11FL 11778787 YP_005279793.1 CDS EKO11_4166 NC_016902.1 4381223 4381369 R PFAM: Entericidin EcnAB; KEGG: sbc:SbBS512_E4679 entericidin B membrane lipoprotein; entericidin EcnAB complement(4381223..4381369) Escherichia coli KO11FL 11778788 YP_005279794.1 CDS EKO11_4167 NC_016902.1 4381480 4381605 R PFAM: Entericidin EcnAB; KEGG: sdy:SDY_4391 entericidin A; entericidin EcnAB complement(4381480..4381605) Escherichia coli KO11FL 11778789 YP_005279795.1 CDS EKO11_4168 NC_016902.1 4381657 4382223 R KEGG: sdy:SDY_4390 elongation factor P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor P ; Elongation factor KOW-like domain-containing protein; Elongation factor P/YeiP protein; translation elongation factor P complement(4381657..4382223) Escherichia coli KO11FL 11778790 YP_005279796.1 CDS EKO11_4169 NC_016902.1 4382265 4383293 D TIGRFAM: lysine 2,3-aminomutase YodO family protein; KEGG: ebw:BWG_3859 putative lysine aminomutase; PFAM: Radical SAM domain protein; lysine 2,3-aminomutase YodO family protein 4382265..4383293 Escherichia coli KO11FL 11778791 YP_005279797.1 CDS EKO11_4170 NC_016902.1 4383459 4384667 D PFAM: transposase IS4 family protein; KEGG: amt:Amet_0304 transposase, IS4 family protein; transposase IS4 family protein 4383459..4384667 Escherichia coli KO11FL 11778792 YP_005279798.1 CDS EKO11_4172 NC_016902.1 4385348 4385911 R PFAM: transposase IS4 family protein; KEGG: acl:ACL_0003 IS-10 transposase; transposase IS4 family protein complement(4385348..4385911) Escherichia coli KO11FL 11778794 YP_005279799.1 CDS EKO11_4173 NC_016902.1 4386364 4387233 D KEGG: ebw:BWG_3858 hypothetical protein; hypothetical protein 4386364..4387233 Escherichia coli KO11FL 11778795 YP_005279800.1 CDS EKO11_4174 NC_016902.1 4387436 4387789 R KEGG: sdy:SDY_4450 hypothetical protein; hypothetical protein complement(4387436..4387789) Escherichia coli KO11FL 11779769 YP_005279801.1 CDS EKO11_4175 NC_016902.1 4387927 4389573 R KEGG: sdy:SDY_4449 chaperonin GroEL; TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; chaperonin GroEL complement(4387927..4389573) Escherichia coli KO11FL 11778796 YP_005279802.1 CDS EKO11_4176 NC_016902.1 4389617 4389910 R PFAM: Chaperonin Cpn10; KEGG: sdy:SDY_4448 co-chaperonin GroES; chaperonin Cpn10 complement(4389617..4389910) Escherichia coli KO11FL 11778797 YP_005279803.1 CDS EKO11_4177 NC_016902.1 4390126 4391442 D KEGG: eoh:ECO103_4936 inner membrane protein YjeH; manually curated; PFAM: amino acid permease-associated region; amino acid permease 4390126..4391442 Escherichia coli KO11FL 11778798 YP_005279804.1 CDS EKO11_4178 NC_016902.1 4391458 4391934 R PFAM: FxsA cytoplasmic membrane protein; KEGG: sbc:SbBS512_E4669 FxsA; FxsA cytoplasmic membrane protein complement(4391458..4391934) Escherichia coli KO11FL 11778799 YP_005279805.1 CDS EKO11_4179 NC_016902.1 4392271 4393707 D KEGG: sdy:SDY_4444 aspartate ammonia-lyase; TIGRFAM: aspartate ammonia-lyase; PFAM: fumarate lyase; Fumarase C-like; aspartate ammonia-lyase 4392271..4393707 Escherichia coli KO11FL 11778800 YP_005279806.1 CDS EKO11_4180 NC_016902.1 4393825 4395126 D KEGG: sbc:SbBS512_E4667 anaerobic C4-dicarboxylate transporter; TIGRFAM: anaerobic c4-dicarboxylate antiporter, Dcu family; PFAM: anaerobic c4-dicarboxylate membrane transporter; anaerobic c4-dicarboxylate antiporter 4393825..4395126 Escherichia coli KO11FL 11778801 YP_005279807.1 CDS EKO11_4181 NC_016902.1 4395242 4395580 D PFAM: CutA1 divalent ion tolerance protein; KEGG: sdy:SDY_4442 divalent-cation tolerance protein CutA; CutA1 divalent ion tolerance protein 4395242..4395580 Escherichia coli KO11FL 11778802 YP_005279808.1 CDS EKO11_4182 NC_016902.1 4395556 4397253 D KEGG: ebw:BWG_3849 thiol:disulfide interchange protein precursor; PFAM: cytochrome c biogenesis protein transmembrane region; Thioredoxin domain-containing protein; Protein-disulfide reductase 4395556..4397253 Escherichia coli KO11FL 11778803 YP_005279809.1 CDS EKO11_4183 NC_016902.1 4397290 4397865 D PFAM: regulatory protein TetR; KEGG: ssn:SSON_4318 putative transcriptional regulator; regulatory protein TetR 4397290..4397865 Escherichia coli KO11FL 11778804 YP_005279810.1 CDS EKO11_4184 NC_016902.1 4398159 4398377 R manually curated; hypothetical protein complement(4398159..4398377) Escherichia coli KO11FL 11778806 YP_005279811.1 CDS EKO11_4185 NC_016902.1 4398664 4400202 D PFAM: transcriptional regulator domain-containing protein; KEGG: ebw:BWG_3847 DNA-binding transcriptional activator CadC; transcriptional regulator CadC 4398664..4400202 Escherichia coli KO11FL 11778807 YP_005279812.1 CDS EKO11_4186 NC_016902.1 4400567 4401901 D KEGG: ebd:ECBD_3898 lysine/cadaverine antiporter; TIGRFAM: arginine/ornithine antiporter; PFAM: amino acid permease-associated region; arginine/ornithine antiporter 4400567..4401901 Escherichia coli KO11FL 11779770 YP_005279813.1 CDS EKO11_4187 NC_016902.1 4401981 4404128 D KEGG: ebd:ECBD_3899 lysine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; lysine decarboxylase 4401981..4404128 Escherichia coli KO11FL 11778808 YP_005279814.1 CDS EKO11_4188 NC_016902.1 4404187 4405644 D KEGG: ebw:BWG_3844 putative transporter; TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region; amino acid/peptide transporter 4404187..4405644 Escherichia coli KO11FL 11778809 YP_005279815.1 CDS EKO11_4189 NC_016902.1 4405881 4407398 D KEGG: eok:G2583_4956 lysyl-tRNA synthetase, heat inducible; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; lysyl-tRNA synthetase 4405881..4407398 Escherichia coli KO11FL 11778810 YP_005279816.1 CDS EKO11_4190 NC_016902.1 4407517 4407690 R PFAM: Protein of unknown function DUF2566; KEGG: ebd:ECBD_3902 uncharacterized protein YjdO; hypothetical protein complement(4407517..4407690) Escherichia coli KO11FL 11778811 YP_005279817.1 CDS EKO11_4191 NC_016902.1 4407718 4408014 R KEGG: ssn:SSON_4305 hypothetical protein; hypothetical protein complement(4407718..4408014) Escherichia coli KO11FL 11778812 YP_005279818.1 CDS EKO11_4192 NC_016902.1 4408241 4408513 R KEGG: ebd:ECBD_3904 hypothetical protein; hypothetical protein complement(4408241..4408513) Escherichia coli KO11FL 11778813 YP_005279819.1 CDS EKO11_4193 NC_016902.1 4408525 4408755 R KEGG: eok:G2583_4952 hypothetical protein; hypothetical protein complement(4408525..4408755) Escherichia coli KO11FL 11778814 YP_005279820.1 CDS EKO11_4194 NC_016902.1 4408936 4410567 D TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; KEGG: sdy:SDY_4238 sensory histidine kinase DcuS; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; signal transduction histidine kinase regulating citrate/malate metabolism 4408936..4410567 Escherichia coli KO11FL 11778815 YP_005279821.1 CDS EKO11_4195 NC_016902.1 4410564 4411283 D KEGG: ebd:ECBD_3907 DNA-binding transcriptional activator DcuR; PFAM: response regulator receiver; SMART: response regulator receiver; fused response regulator receiver/hypothetical protein 4410564..4411283 Escherichia coli KO11FL 11778816 YP_005279822.1 CDS EKO11_4196 NC_016902.1 4411854 4413194 D KEGG: sbo:SBO_4327 anaerobic C4-dicarboxylate transporter; TIGRFAM: anaerobic c4-dicarboxylate antiporter, Dcu family; PFAM: anaerobic c4-dicarboxylate membrane transporter; anaerobic c4-dicarboxylate antiporter 4411854..4413194 Escherichia coli KO11FL 11778817 YP_005279823.1 CDS EKO11_4197 NC_016902.1 4413272 4414918 D KEGG: ebw:BWG_3835 anaerobic class I fumarate hydratase (fumarase B); TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit beta 4413272..4414918 Escherichia coli KO11FL 11778818 YP_005279824.1 CDS EKO11_4198 NC_016902.1 4415040 4415669 D PFAM: Uncharacterised conserved protein UCP020606; KEGG: ebw:BWG_3834 hypothetical protein; hypothetical protein 4415040..4415669 Escherichia coli KO11FL 11778819 YP_005279825.1 CDS EKO11_4199 NC_016902.1 4415808 4417217 R TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; KEGG: ebw:BWG_3833 melibiose:sodium symporter; sugar (Glycoside-Pentoside-Hexuronide) transporter complement(4415808..4417217) Escherichia coli KO11FL 11778820 YP_005279826.1 CDS EKO11_4200 NC_016902.1 4417332 4418687 R PFAM: glycoside hydrolase family 4; KEGG: ebw:BWG_3832 alpha-galactosidase, NAD(P)-binding; glycoside hydrolase family protein complement(4417332..4418687) Escherichia coli KO11FL 11778821 YP_005279827.1 CDS EKO11_4201 NC_016902.1 4418970 4419878 D KEGG: ebd:ECBD_3913 DNA-binding transcriptional regulator MelR; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 4418970..4419878 Escherichia coli KO11FL 11778822 YP_005279828.1 CDS EKO11_4202 NC_016902.1 4420074 4422344 D KEGG: eoh:ECO103_4869 biodegradative arginine decarboxylase AdiA; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; Arginine decarboxylase 4420074..4422344 Escherichia coli KO11FL 11778823 YP_005279829.1 CDS EKO11_4203 NC_016902.1 4422669 4423430 D KEGG: ebd:ECBD_3915 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 4422669..4423430 Escherichia coli KO11FL 11778824 YP_005279830.1 CDS EKO11_4204 NC_016902.1 4423567 4424904 D PFAM: amino acid permease-associated region; KEGG: ssn:SSON_4290 arginine:agmatin antiporter; amino acid permease 4423567..4424904 Escherichia coli KO11FL 11778825 YP_005279831.1 CDS EKO11_4205 NC_016902.1 4425008 4426651 D PFAM: sulfatase; protein of unknown function DUF1705; KEGG: etw:ECSP_5213 putative cell division protein; sulfatase 4425008..4426651 Escherichia coli KO11FL 11778826 YP_005279832.1 CDS EKO11_4206 NC_016902.1 4426648 4427316 D KEGG: ebw:BWG_3826 DNA-binding transcriptional regulator BasR; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; two component transcriptional regulator, winged helix family 4426648..4427316 Escherichia coli KO11FL 11778827 YP_005279833.1 CDS EKO11_4207 NC_016902.1 4427317 4428417 D KEGG: ebd:ECBD_3919 sensor protein BasS/PmrB; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; integral membrane sensor signal transduction histidine kinase 4427317..4428417 Escherichia coli KO11FL 11778828 YP_005279834.1 CDS EKO11_4208 NC_016902.1 4428594 4430096 R KEGG: sdy:SDY_4102 proline/glycine betaine transporter; TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: Osmosensory transporter coiled coil; metabolite/H+ symporter, major facilitator superfamily (MFS) complement(4428594..4430096) Escherichia coli KO11FL 11778829 YP_005279835.1 CDS EKO11_4209 NC_016902.1 4430360 4431238 R KEGG: ebw:BWG_3823 hypothetical protein; hypothetical protein complement(4430360..4431238) Escherichia coli KO11FL 11778830 YP_005279836.1 CDS EKO11_4210 NC_016902.1 4431235 4433463 R KEGG: ebw:BWG_3822 hypothetical protein; hypothetical protein complement(4431235..4433463) Escherichia coli KO11FL 11778831 YP_005279837.1 CDS EKO11_4211 NC_016902.1 4433864 4434199 D KEGG: sdy:SDY_4109 hypothetical protein; TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein; alkylphosphonate utilization operon protein PhnA 4433864..4434199 Escherichia coli KO11FL 11778832 YP_005279838.1 CDS EKO11_4212 NC_016902.1 4434857 4435300 D PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ebd:ECBD_3924 hypothetical protein; Glyoxalase/bleomycin resistance protein/dioxygenase 4434857..4435300 Escherichia coli KO11FL 11779771 YP_005279839.1 CDS EKO11_4213 NC_016902.1 4435433 4436221 D TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: ebw:BWG_3819 phosphonate/organophosphate ester transporter subunit; SMART: AAA ATPase; phosphonate ABC transporter ATP-binding protein 4435433..4436221 Escherichia coli KO11FL 11778833 YP_005279840.1 CDS EKO11_4214 NC_016902.1 4436246 4437262 D TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate binding protein; phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: sbo:SBO_4130 periplasmic binding protein component of Pn transporter; phosphonate ABC transporter substrate-binding protein 4436246..4437262 Escherichia coli KO11FL 11778834 YP_005279841.1 CDS EKO11_4216 NC_016902.1 4438176 4438901 D TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; KEGG: ebd:ECBD_3928 phosphonate metabolism transcriptional regulator PhnF; SMART: regulatory protein GntR HTH; phosphonate C-P lyase system transcriptional regulator PhnF 4438176..4438901 Escherichia coli KO11FL 11778836 YP_005279842.1 CDS EKO11_4217 NC_016902.1 4438902 4439354 D KEGG: ebw:BWG_3816 carbon-phosphorus lyase complex subunit; TIGRFAM: phosphonate C-P lyase system protein PhnG; PFAM: phosphonate metabolism PhnG; phosphonate C-P lyase system protein PhnG 4438902..4439354 Escherichia coli KO11FL 11779772 YP_005279843.1 CDS EKO11_4218 NC_016902.1 4439351 4439935 D KEGG: ebd:ECBD_3930 carbon-phosphorus lyase complex subunit; TIGRFAM: phosphonate C-P lyase system protein PhnH; PFAM: phosphonate metabolism; phosphonate C-P lyase system protein PhnH 4439351..4439935 Escherichia coli KO11FL 11778837 YP_005279844.1 CDS EKO11_4219 NC_016902.1 4439935 4440999 D PFAM: phosphonate metabolism; KEGG: ebw:BWG_3814 carbon-phosphorus lyase complex subunit; phosphonate metabolism protein 4439935..4440999 Escherichia coli KO11FL 11778838 YP_005279845.1 CDS EKO11_4220 NC_016902.1 4440992 4441837 D PFAM: phosphonate metabolism PhnJ; KEGG: ebw:BWG_3813 carbon-phosphorus lyase complex subunit; phosphonate metabolism PhnJ 4440992..4441837 Escherichia coli KO11FL 11778839 YP_005279846.1 CDS EKO11_4221 NC_016902.1 4441834 4442592 D TIGRFAM: phosphonate C-P lyase system protein PhnK; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ssn:SSON_4273 phosphonate C-P lyase system protein PhnK; SMART: AAA ATPase; phosphonate C-P lyase system protein PhnK 4441834..4442592 Escherichia coli KO11FL 11778840 YP_005279847.1 CDS EKO11_4222 NC_016902.1 4442703 4443383 D TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter related; KEGG: ebd:ECBD_3934 phosphonate C-P lyase system protein PhnL; SMART: AAA ATPase; phosphonate C-P lyase system protein PhnL 4442703..4443383 Escherichia coli KO11FL 11778841 YP_005279848.1 CDS EKO11_4223 NC_016902.1 4443380 4444516 D KEGG: ebr:ECB_03967 carbon-phosphorus lyase complex subunit; TIGRFAM: phosphonate metabolism protein PhnM; PFAM: amidohydrolase; phosphonate metabolism protein PhnM 4443380..4444516 Escherichia coli KO11FL 11778842 YP_005279849.1 CDS EKO11_4224 NC_016902.1 4444516 4445073 D KEGG: ssn:SSON_4270 ribose 1,5-bisphosphokinase; TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; SMART: guanylate kinase/L-type calcium channel region; phosphonate metabolism protein/1,5-bisphosphokinase PhnN 4444516..4445073 Escherichia coli KO11FL 11778843 YP_005279850.1 CDS EKO11_4225 NC_016902.1 4445060 4445494 D PFAM: GCN5-related N-acetyltransferase; KEGG: ebd:ECBD_3937 aminoalkylphosphonic acid N-acetyltransferase; N-acetyltransferase GCN5 4445060..4445494 Escherichia coli KO11FL 11779773 YP_005279851.1 CDS EKO11_4226 NC_016902.1 4445496 4446254 D TIGRFAM: phosphonate metabolism protein PhnP; KEGG: ebd:ECBD_3938 carbon-phosphorus lyase complex accessory protein; phosphonate metabolism protein PhnP 4445496..4446254 Escherichia coli KO11FL 11779774 YP_005279852.1 CDS EKO11_4227 NC_016902.1 4446401 4446730 R KEGG: sbo:SBO_4117 hypothetical protein; hypothetical protein complement(4446401..4446730) Escherichia coli KO11FL 11778844 YP_005279853.1 CDS EKO11_4228 NC_016902.1 4446799 4447248 R TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerase, RpiB/LacA/LacB family; KEGG: ebd:ECBD_3940 ribose-5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; ribose 5-phosphate isomerase B complement(4446799..4447248) Escherichia coli KO11FL 11778845 YP_005279854.1 CDS EKO11_4229 NC_016902.1 4447607 4448497 D PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: ebr:ECB_03961 DNA-binding transcriptional repressor RpiR; RpiR family transcriptional regulator 4447607..4448497 Escherichia coli KO11FL 11778846 YP_005279855.1 CDS EKO11_4230 NC_016902.1 4448556 4449491 D PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ebd:ECBD_3942 D-allose transporter subunit; periplasmic binding protein/LacI transcriptional regulator 4448556..4449491 Escherichia coli KO11FL 11778847 YP_005279856.1 CDS EKO11_4231 NC_016902.1 4449618 4451150 D KEGG: ebd:ECBD_3943 D-allose transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter 4449618..4451150 Escherichia coli KO11FL 11778848 YP_005279857.1 CDS EKO11_4232 NC_016902.1 4451129 4452109 D PFAM: inner-membrane translocator; KEGG: ebd:ECBD_3944 D-allose transporter subunit; inner-membrane translocator 4451129..4452109 Escherichia coli KO11FL 11778849 YP_005279858.1 CDS EKO11_4233 NC_016902.1 4452120 4452815 D KEGG: ebd:ECBD_3945 allulose-6-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; Ribulose-phosphate 3-epimerase 4452120..4452815 Escherichia coli KO11FL 11778850 YP_005279859.1 CDS EKO11_4234 NC_016902.1 4452799 4453728 D PFAM: ROK family protein; KEGG: ebd:ECBD_3946 D-allose kinase; ROK family protein 4452799..4453728 Escherichia coli KO11FL 11778851 YP_005279860.1 CDS EKO11_4235 NC_016902.1 4454001 4455986 D KEGG: ebw:BWG_3798 putative alkyl sulfatase; putative alkyl sulfatase 4454001..4455986 Escherichia coli KO11FL 11779775 YP_005279861.1 CDS EKO11_4236 NC_016902.1 4456195 4456470 D KEGG: ebd:ECBD_3948 formate dehydrogenase H; formate dehydrogenase H 4456195..4456470 Escherichia coli KO11FL 11778852 YP_005279862.1 CDS EKO11_4237 NC_016902.1 4456489 4457520 D KEGG: ebd:ECBD_3949 multidrug resistance protein MdtN; TIGRFAM: efflux pump membrane protein; PFAM: secretion protein HlyD family protein; efflux pump membrane protein 4456489..4457520 Escherichia coli KO11FL 11779776 YP_005279863.1 CDS EKO11_4238 NC_016902.1 4457520 4459571 D PFAM: Fusaric acid resistance protein conserved region; KEGG: ebw:BWG_3795 multidrug efflux system protein MdtO; fusaric acid resistance protein 4457520..4459571 Escherichia coli KO11FL 11778853 YP_005279864.1 CDS EKO11_4239 NC_016902.1 4459568 4461034 D KEGG: ebd:ECBD_3951 putative outer membrane efflux protein MdtP; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein; NodT family RND efflux system outer membrane lipoprotein 4459568..4461034 Escherichia coli KO11FL 11778854 YP_005279865.1 CDS EKO11_4240 NC_016902.1 4461232 4463379 D manually curated; TIGRFAM: formate dehydrogenase, alpha subunit; KEGG: ebr:ECB_03951 formate dehydrogenase-H, selenopolypeptide subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; formate dehydrogenase subunit alpha 4461232..4463379 Escherichia coli KO11FL 11779777 YP_005279866.1 CDS EKO11_4241 NC_016902.1 4463473 4464162 D PFAM: Sel1 domain protein repeat-containing protein; KEGG: ssn:SSON_4259 hypothetical protein; Sel1 domain-containing protein repeat-containing protein 4463473..4464162 Escherichia coli KO11FL 11779778 YP_005279867.1 CDS EKO11_4243 NC_016902.1 4464693 4466006 R PFAM: sodium:dicarboxylate symporter; KEGG: ebw:BWG_3791 glutamate/aspartate:proton symporter; sodium:dicarboxylate symporter complement(4464693..4466006) Escherichia coli KO11FL 11778856 YP_005279868.1 CDS EKO11_4244 NC_016902.1 4466348 4466944 R KEGG: ebr:ECB_03948 formate-dependent nitrite reductase complex subunit NrfG; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; hypothetical protein complement(4466348..4466944) Escherichia coli KO11FL 11779779 YP_005279869.1 CDS EKO11_4245 NC_016902.1 4466941 4467324 R KEGG: ebw:BWG_3789 formate-dependent nitrite reductase complex subunit NrfF; TIGRFAM: cytochrome c nitrite reductase, accessory protein NrfF; PFAM: cytochrome C biogenesis protein; cytochrome c nitrite reductase, accessory protein NrfF complement(4466941..4467324) Escherichia coli KO11FL 11778857 YP_005279870.1 CDS EKO11_4246 NC_016902.1 4467317 4468939 R KEGG: ebw:BWG_3788 heme lyase subunit NrfE; TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; cytochrome c-type biogenesis protein CcmF complement(4467317..4468939) Escherichia coli KO11FL 11778858 YP_005279871.1 CDS EKO11_4247 NC_016902.1 4469055 4470011 R KEGG: ebd:ECBD_3959 cytochrome c nitrite reductase, NrfD subunit; TIGRFAM: cytochrome c nitrite reductase, NrfD subunit; PFAM: Polysulphide reductase NrfD; cytochrome c nitrite reductase, NrfD subunit complement(4469055..4470011) Escherichia coli KO11FL 11778859 YP_005279872.1 CDS EKO11_4248 NC_016902.1 4470008 4470679 R TIGRFAM: cytochrome c nitrite reductase, Fe-S protein; KEGG: sbo:SBO_4103 formate-dependent nitrite reductase complex Fe-S centers; cytochrome c nitrite reductase, Fe-S protein complement(4470008..4470679) Escherichia coli KO11FL 11778860 YP_005279873.1 CDS EKO11_4249 NC_016902.1 4470676 4471242 R TIGRFAM: cytochrome c nitrite reductase, pentaheme subunit; KEGG: ssn:SSON_4252 cytochrome c nitrite reductase pentaheme subunit; cytochrome c nitrite reductase, pentaheme subunit complement(4470676..4471242) Escherichia coli KO11FL 11778861 YP_005279874.1 CDS EKO11_4250 NC_016902.1 4471287 4472723 R TIGRFAM: formate-dependent cytochrome c nitrite reductase, c552 subunit; KEGG: sbc:SbBS512_E4591 cytochrome c552; PFAM: cytochrome c552; formate-dependent cytochrome c nitrite reductase, c552 subunit complement(4471287..4472723) Escherichia coli KO11FL 11778862 YP_005279875.1 CDS EKO11_4251 NC_016902.1 4473116 4475074 D KEGG: ebd:ECBD_3963 acetyl-CoA synthetase; TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase; acetate/CoA ligase 4473116..4475074 Escherichia coli KO11FL 11778863 YP_005279876.1 CDS EKO11_4252 NC_016902.1 4475274 4475588 D PFAM: protein of unknown function DUF485; KEGG: sbc:SbBS512_E4587 hypothetical protein; hypothetical protein 4475274..4475588 Escherichia coli KO11FL 11778864 YP_005279877.1 CDS EKO11_4253 NC_016902.1 4475585 4477234 D KEGG: ebr:ECB_03939 acetate permease; TIGRFAM: cation/acetate symporter ActP; SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; cation/acetate symporter ActP 4475585..4477234 Escherichia coli KO11FL 11778865 YP_005279878.1 CDS EKO11_4254 NC_016902.1 4477412 4478704 D PFAM: pentapeptide repeat protein; KEGG: ebr:ECB_03938 hypothetical protein; pentapeptide repeat-containing protein 4477412..4478704 Escherichia coli KO11FL 11778866 YP_005279879.1 CDS EKO11_4255 NC_016902.1 4478858 4480507 R KEGG: ebw:BWG_3779 putative cation/proton antiporter; TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; Na+/H+ antiporter complement(4478858..4480507) Escherichia coli KO11FL 11778867 YP_005279880.1 CDS EKO11_4256 NC_016902.1 4480659 4482008 R PFAM: Xanthine/uracil/vitamin C permease; KEGG: sdy:SDY_4503 hypothetical protein; xanthine/uracil/vitamin C permease complement(4480659..4482008) Escherichia coli KO11FL 11778868 YP_005279881.1 CDS EKO11_4257 NC_016902.1 4482554 4483018 R TIGRFAM: redox-sensitive transcriptional activator SoxR; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; KEGG: sdy:SDY_4504 redox-sensing activator of SoxS; SMART: regulatory protein MerR; MerR family transcriptional regulator complement(4482554..4483018) Escherichia coli KO11FL 11778869 YP_005279882.1 CDS EKO11_4258 NC_016902.1 4483104 4483427 D KEGG: sbc:SbBS512_E4580 DNA-binding transcriptional regulator SoxS; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 4483104..4483427 Escherichia coli KO11FL 11778870 YP_005279883.1 CDS EKO11_4259 NC_016902.1 4483430 4485016 R KEGG: ebd:ECBD_3971 EAL domain protein; PFAM: EAL domain protein; SMART: EAL domain protein; EAL domain-containing protein complement(4483430..4485016) Escherichia coli KO11FL 11778871 YP_005279884.1 CDS EKO11_4260 NC_016902.1 4485446 4485727 D KEGG: sbc:SbBS512_E4574 hypothetical protein; hypothetical protein 4485446..4485727 Escherichia coli KO11FL 11778872 YP_005279885.1 CDS EKO11_4261 NC_016902.1 4485826 4486362 R KEGG: sbo:SBO_4088 single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; single-strand binding protein complement(4485826..4486362) Escherichia coli KO11FL 11778873 YP_005279886.1 CDS EKO11_4262 NC_016902.1 4486616 4489438 D KEGG: sbc:SbBS512_E4572 excinuclease ABC subunit A; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; excinuclease ABC subunit A 4486616..4489438 Escherichia coli KO11FL 11778874 YP_005279887.1 CDS EKO11_4263 NC_016902.1 4489473 4489829 R KEGG: sdy:SDY_4510 hypothetical protein; hypothetical protein complement(4489473..4489829) Escherichia coli KO11FL 11779780 YP_005279888.1 CDS EKO11_4264 NC_016902.1 4489833 4490249 R PFAM: protein of unknown function UPF0047; KEGG: ssn:SSON_4236 hypothetical protein; hypothetical protein complement(4489833..4490249) Escherichia coli KO11FL 11778875 YP_005279889.1 CDS EKO11_4265 NC_016902.1 4490360 4491073 R TIGRFAM: HAD superfamily (subfamily IIIB) phosphatase, TIGR01672; KEGG: sbc:SbBS512_E4569 acid phosphatase/phosphotransferase; PFAM: acid phosphatase (Class B); HAD superfamily phosphatase complement(4490360..4491073) Escherichia coli KO11FL 11778876 YP_005279890.1 CDS EKO11_4267 NC_016902.1 4492179 4493372 R KEGG: eoi:ECO111_4928 aromatic amino acid aminotransferase; PFAM: aminotransferase class I and II; aromatic-amino-acid transaminase complement(4492179..4493372) Escherichia coli KO11FL 11778878 YP_005279891.1 CDS EKO11_4268 NC_016902.1 4493625 4494704 R TIGRFAM: alanine racemase; KEGG: sfv:SFV_4160 alanine racemase; PFAM: alanine racemase domain protein; alanine racemase complement(4493625..4494704) Escherichia coli KO11FL 11778879 YP_005279892.1 CDS EKO11_4269 NC_016902.1 4494757 4496172 R TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: sbc:SbBS512_E4543 replicative DNA helicase; SMART: AAA ATPase; replicative DNA helicase complement(4494757..4496172) Escherichia coli KO11FL 11778880 YP_005279893.1 CDS EKO11_4270 NC_016902.1 4496255 4497238 D PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ssn:SSON_4231 quinone oxidoreductase, NADPH-dependent; alcohol dehydrogenase 4496255..4497238 Escherichia coli KO11FL 11778881 YP_005279894.1 CDS EKO11_4271 NC_016902.1 4497404 4497823 R manually curated; TIGRFAM: phage shock protein G; KEGG: sfv:SFV_4163 phage shock protein G; PFAM: shock protein G; phage shock protein G complement(4497404..4497823) Escherichia coli KO11FL 11778882 YP_005279895.1 CDS EKO11_4272 NC_016902.1 4497780 4498817 R KEGG: ssn:SSON_4229 tRNA-dihydrouridine synthase A; TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase DuS; yjbN family TIM-barrel protein complement(4497780..4498817) Escherichia coli KO11FL 11778883 YP_005279896.1 CDS EKO11_4273 NC_016902.1 4499181 4500203 R PFAM: Protein of unknown function DUF2713; KEGG: etw:ECSP_5125 hypothetical protein; hypothetical protein complement(4499181..4500203) Escherichia coli KO11FL 11778884 YP_005279897.1 CDS EKO11_4274 NC_016902.1 4500521 4501036 D PFAM: ferric-uptake regulator; KEGG: ssn:SSON_4226 zinc uptake transcriptional repressor; ferric uptake regulator family protein 4500521..4501036 Escherichia coli KO11FL 11778885 YP_005279898.1 CDS EKO11_4275 NC_016902.1 4501078 4501287 R PFAM: CsbD family protein; KEGG: sdy:SDY_4529 putative stress-response protein; CsbD family protein complement(4501078..4501287) Escherichia coli KO11FL 11778886 YP_005279899.1 CDS EKO11_4276 NC_016902.1 4501403 4502782 R manually curated; TIGRFAM: MATE efflux family protein; KEGG: sfv:SFV_4169 DNA-damage-inducible SOS response protein; PFAM: multi antimicrobial extrusion protein MatE; MATE efflux family protein complement(4501403..4502782) Escherichia coli KO11FL 11778887 YP_005279900.1 CDS EKO11_4277 NC_016902.1 4502801 4503409 R KEGG: sdy:SDY_4531 LexA repressor; TIGRFAM: LexA repressor; PFAM: LexA DNA-binding domain protein; Peptidase S24/S26A/S26B, conserved region; LexA family transcriptional repressor complement(4502801..4503409) Escherichia coli KO11FL 11778888 YP_005279901.1 CDS EKO11_4278 NC_016902.1 4503519 4503887 R KEGG: sdy:SDY_4532 diacylglycerol kinase; PFAM: diacylglycerol kinase; Diacylglycerol kinase complement(4503519..4503887) Escherichia coli KO11FL 11778889 YP_005279902.1 CDS EKO11_4279 NC_016902.1 4504058 4506481 D PFAM: phospholipid/glycerol acyltransferase; KEGG: eok:G2583_4866 glycerol-3-phosphate acyltransferase; SMART: phospholipid/glycerol acyltransferase; glycerol-3-phosphate O-acyltransferase 4504058..4506481 Escherichia coli KO11FL 11778890 YP_005279903.1 CDS EKO11_4280 NC_016902.1 4506636 4507508 R KEGG: sfv:SFV_4173 4-hydroxybenzoate octaprenyltransferase; TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase; 4-hydroxybenzoate polyprenyltransferase complement(4506636..4507508) Escherichia coli KO11FL 11778891 YP_005279904.1 CDS EKO11_4281 NC_016902.1 4507521 4508018 R KEGG: sdy:SDY_4535 chorismate pyruvate lyase; PFAM: Chorismate lyase; chorismate lyase complement(4507521..4508018) Escherichia coli KO11FL 11779781 YP_005279905.1 CDS EKO11_4283 NC_016902.1 4509627 4509821 R KEGG: ebd:ECBD_3996 hypothetical protein; hypothetical protein complement(4509627..4509821) Escherichia coli KO11FL 11778893 YP_005279906.1 CDS EKO11_4284 NC_016902.1 4509923 4510075 D KEGG: ebd:ECBD_3997 hypothetical protein; hypothetical protein 4509923..4510075 Escherichia coli KO11FL 11779782 YP_005279907.1 CDS EKO11_4285 NC_016902.1 4510050 4510970 R PFAM: Maltose operon periplasmic; KEGG: eoi:ECO111_4859 maltose regulon periplasmic protein; maltose operon periplasmic complement(4510050..4510970) Escherichia coli KO11FL 11778894 YP_005279908.1 CDS EKO11_4286 NC_016902.1 4511213 4512553 R PFAM: porin LamB type; KEGG: ssn:SSON_4214 maltoporin; LamB type porin complement(4511213..4512553) Escherichia coli KO11FL 11778895 YP_005279909.1 CDS EKO11_4287 NC_016902.1 4512625 4513830 R manually curated; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; KEGG: ssn:SSON_4213 maltose/maltodextrin transporter ATP-binding protein; SMART: AAA ATPase; ABC transporter complement(4512625..4513830) Escherichia coli KO11FL 11778896 YP_005279910.1 CDS EKO11_4288 NC_016902.1 4513917 4514012 D KEGG: ebd:ECBD_4001 hypothetical protein; hypothetical protein 4513917..4514012 Escherichia coli KO11FL 11778897 YP_005279911.1 CDS EKO11_4289 NC_016902.1 4514105 4515295 D PFAM: extracellular solute-binding protein family 1; KEGG: ebd:ECBD_4002 maltose ABC transporter periplasmic protein; extracellular solute-binding protein 4514105..4515295 Escherichia coli KO11FL 11779783 YP_005279912.1 CDS EKO11_4290 NC_016902.1 4515449 4516993 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sfv:SFV_4181 maltose transporter membrane protein; binding-protein-dependent transport system inner membrane protein 4515449..4516993 Escherichia coli KO11FL 11778898 YP_005279913.1 CDS EKO11_4291 NC_016902.1 4517008 4517898 D PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sfx:S3558 maltose transporter permease; binding-protein-dependent transport system inner membrane protein 4517008..4517898 Escherichia coli KO11FL 11778899 YP_005279914.1 CDS EKO11_4292 NC_016902.1 4518270 4519745 D TIGRFAM: sugar transporter; KEGG: eoh:ECO103_4779 D-xylose transporter XylE; sugar transporter 4518270..4519745 Escherichia coli KO11FL 11778900 YP_005279915.1 CDS EKO11_4293 NC_016902.1 4519789 4520199 R PFAM: Phosphate-starvation-inducible E-like; KEGG: sdy:SDY_4218 phosphate-starvation-inducible protein PsiE; phosphate-starvation-inducible E-like protein complement(4519789..4520199) Escherichia coli KO11FL 11778901 YP_005279916.1 CDS EKO11_4294 NC_016902.1 4520794 4522890 R PFAM: protein of unknown function DUF940 membrane lipoprotein; KEGG: ebw:BWG_3685 putative porin; hypothetical protein complement(4520794..4522890) Escherichia coli KO11FL 11779784 YP_005279917.1 CDS EKO11_4295 NC_016902.1 4522890 4523627 R PFAM: protein of unknown function DUF1017; KEGG: ebd:ECBD_4009 protein of unknown function DUF1017; hypothetical protein complement(4522890..4523627) Escherichia coli KO11FL 11778902 YP_005279918.1 CDS EKO11_4296 NC_016902.1 4523624 4524262 R KEGG: eoh:ECO103_4775 putative lipoprotein; putative lipoprotein complement(4523624..4524262) Escherichia coli KO11FL 11778903 YP_005279919.1 CDS EKO11_4297 NC_016902.1 4524973 4526622 R KEGG: eoh:ECO103_4773 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI); glucose-6-phosphate isomerase complement(4524973..4526622) Escherichia coli KO11FL 11778904 YP_005279920.1 CDS EKO11_4298 NC_016902.1 4527147 4528496 D TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; KEGG: eoh:ECO103_4772 aspartate kinase III; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; aspartate kinase 4527147..4528496 Escherichia coli KO11FL 11778905 YP_005279921.1 CDS EKO11_4299 NC_016902.1 4528641 4529567 D KEGG: eoi:ECO111_4845 hypothetical protein; hypothetical protein 4528641..4529567 Escherichia coli KO11FL 11778906 YP_005279922.1 CDS EKO11_4300 NC_016902.1 4529603 4530367 R PFAM: Nucleotidyltransferase, predicted; KEGG: eoh:ECO103_4770 hypothetical protein; nucleotidyltransferase complement(4529603..4530367) Escherichia coli KO11FL 11778907 YP_005279923.1 CDS EKO11_4301 NC_016902.1 4530400 4531527 R KEGG: eoj:ECO26_5136 hypothetical protein; PFAM: band 7 protein; SMART: band 7 protein; hypothetical protein complement(4530400..4531527) Escherichia coli KO11FL 11778908 YP_005279924.1 CDS EKO11_4302 NC_016902.1 4532057 4532329 D KEGG: sdy:SDY_4309 hypothetical protein; hypothetical protein 4532057..4532329 Escherichia coli KO11FL 11778909 YP_005279925.1 CDS EKO11_4303 NC_016902.1 4532330 4533202 R KEGG: eok:G2583_4847 ribosomal large subunit pseudouridine synthase F; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; pseudouridine synthase complement(4532330..4533202) Escherichia coli KO11FL 11778910 YP_005279926.1 CDS EKO11_4304 NC_016902.1 4533414 4534103 D KEGG: sbc:SbBS512_E4515 peptidase E; PFAM: peptidase S51 dipeptidase E; dipeptidase E 4533414..4534103 Escherichia coli KO11FL 11778911 YP_005279927.1 CDS EKO11_4305 NC_016902.1 4534194 4535825 R KEGG: ssn:SSON_4191 putative alpha helix protein; TIGRFAM: sodium-dependent inorganic phosphate (Pi) transporter; Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; PhoU family protein; sodium-dependent inorganic phosphate (Pi) transporter complement(4534194..4535825) Escherichia coli KO11FL 11778912 YP_005279928.1 CDS EKO11_4306 NC_016902.1 4536045 4539728 R KEGG: ebw:BWG_3675 B12-dependent methionine synthase; TIGRFAM: methionine synthase; PFAM: homocysteine S-methyltransferase; dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; Vitamin B12 dependent methionine synthase activation region; methionine synthase complement(4536045..4539728) Escherichia coli KO11FL 11778913 YP_005279929.1 CDS EKO11_4307 NC_016902.1 4539928 4540752 D KEGG: sfx:S3646 transcriptional repressor IclR; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; IclR family transcriptional regulator 4539928..4540752 Escherichia coli KO11FL 11778914 YP_005279930.1 CDS EKO11_4308 NC_016902.1 4541069 4542643 D PFAM: ShET2 enterotoxin domain protein; KEGG: eoi:ECO111_4829 T3SS effector-like protein EspL-homolog; ShET2 enterotoxin domain protein 4541069..4542643 Escherichia coli KO11FL 11778915 YP_005279931.1 CDS EKO11_4309 NC_016902.1 4542612 4544348 R KEGG: eoh:ECO103_4760 bifunctional isocitrate dehydrogenase kinase/phosphatase protein; PFAM: Isocitrate dehydrogenase kinasephosphatase; (isocitrate dehydrogenase) kinase complement(4542612..4544348) Escherichia coli KO11FL 11778916 YP_005279932.1 CDS EKO11_4310 NC_016902.1 4544531 4545835 R KEGG: sdy:SDY_4328 isocitrate lyase; TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase; isocitrate lyase complement(4544531..4545835) Escherichia coli KO11FL 11778917 YP_005279933.1 CDS EKO11_4311 NC_016902.1 4545865 4547466 R TIGRFAM: malate synthase A; KEGG: eoi:ECO111_4826 malate synthase; PFAM: Malate synthase family protein; malate synthase A complement(4545865..4547466) Escherichia coli KO11FL 11778918 YP_005279934.1 CDS EKO11_4312 NC_016902.1 4547735 4548664 R TIGRFAM: homoserine O-succinyltransferase; KEGG: eoh:ECO103_4757 homoserine O-succinyltransferase; PFAM: homoserine O-succinyltransferase; homoserine O-succinyltransferase complement(4547735..4548664) Escherichia coli KO11FL 11778919 YP_005279935.1 CDS EKO11_4313 NC_016902.1 4548821 4549264 D PFAM: GCN5-related N-acetyltransferase; KEGG: eoh:ECO103_4756 hypothetical protein; N-acetyltransferase GCN5 4548821..4549264 Escherichia coli KO11FL 11778920 YP_005279936.1 CDS EKO11_4314 NC_016902.1 4555007 4556596 D SMART: AICARFT/IMPCHase bienzyme formylation region; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; KEGG: sbc:SbBS512_E4498 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 4555007..4556596 Escherichia coli KO11FL 11778923 YP_005279937.1 CDS EKO11_4315 NC_016902.1 4556608 4557897 D TIGRFAM: phosphoribosylamine/glycine ligase; KEGG: ebd:ECBD_4027 phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; phosphoribosylamine--glycine ligase 4556608..4557897 Escherichia coli KO11FL 11778924 YP_005279938.1 CDS EKO11_4316 NC_016902.1 4557894 4559219 R KEGG: sbc:SbBS512_E4497 transcriptional regulatory protein ZraR; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; two component, sigma54 specific, transcriptional regulator, Fis family complement(4557894..4559219) Escherichia coli KO11FL 11778925 YP_005279939.1 CDS EKO11_4317 NC_016902.1 4559216 4560592 R KEGG: eoh:ECO103_4752 sensor protein ZraS; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; integral membrane sensor signal transduction histidine kinase complement(4559216..4560592) Escherichia coli KO11FL 11778926 YP_005279940.1 CDS EKO11_4318 NC_016902.1 4560699 4560827 D hypothetical protein 4560699..4560827 Escherichia coli KO11FL 11778927 YP_005279941.1 CDS EKO11_4319 NC_016902.1 4560830 4561255 D KEGG: eoh:ECO103_4751 zinc resistance protein; zinc resistance protein 4560830..4561255 Escherichia coli KO11FL 11778928 YP_005279942.1 CDS EKO11_4320 NC_016902.1 4561257 4561958 R KEGG: sdy:SDY_3725 hypothetical protein; manually curated; PFAM: protein of unknown function DUF1481; hypothetical protein complement(4561257..4561958) Escherichia coli KO11FL 11778929 YP_005279943.1 CDS EKO11_4321 NC_016902.1 4561965 4562237 R KEGG: sdy:SDY_3726 transcriptional regulator HU subunit alpha; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; histone family protein DNA-binding protein complement(4561965..4562237) Escherichia coli KO11FL 11778930 YP_005279944.1 CDS EKO11_4322 NC_016902.1 4562424 4563014 R PFAM: protein of unknown function DUF416; KEGG: ssn:SSON_4172 hypothetical protein; hypothetical protein complement(4562424..4563014) Escherichia coli KO11FL 11778931 YP_005279945.1 CDS EKO11_4323 NC_016902.1 4563057 4563728 R KEGG: sbc:SbBS512_E4489 endonuclease V; PFAM: Endonuclease V; Deoxyribonuclease V complement(4563057..4563728) Escherichia coli KO11FL 11779787 YP_005279946.1 CDS EKO11_4324 NC_016902.1 4563738 4564802 R TIGRFAM: uroporphyrinogen decarboxylase; KEGG: sbc:SbBS512_E4488 uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); uroporphyrinogen decarboxylase complement(4563738..4564802) Escherichia coli KO11FL 11778932 YP_005279947.1 CDS EKO11_4325 NC_016902.1 4564842 4565615 R KEGG: ssn:SSON_4169 NADH pyrophosphatase; PFAM: NUDIX hydrolase; NADH pyrophosphatase-like ; Zinc ribbon NADH pyrophosphatase; NAD(+) diphosphatase complement(4564842..4565615) Escherichia coli KO11FL 11779788 YP_005279948.1 CDS EKO11_4326 NC_016902.1 4565710 4566186 D PFAM: regulator of RNA polymerase sigma(70) subunit Rsd/AlgQ; KEGG: sbc:SbBS512_E4486 anti-RNA polymerase sigma 70 factor; regulator of RpoD, Rsd/AlgQ 4565710..4566186 Escherichia coli KO11FL 11778933 YP_005279949.1 CDS EKO11_4327 NC_016902.1 4566419 4568314 D KEGG: eoh:ECO103_4743 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; thiamine biosynthesis protein ThiC 4566419..4568314 Escherichia coli KO11FL 11778934 YP_005279950.1 CDS EKO11_4328 NC_016902.1 4568314 4568949 D KEGG: sbc:SbBS512_E4484 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase 4568314..4568949 Escherichia coli KO11FL 11778935 YP_005279951.1 CDS EKO11_4329 NC_016902.1 4568942 4569697 D KEGG: sfv:SFV_4064 thiamine biosynthesis protein ThiF; TIGRFAM: thiazole biosynthesis adenylyltransferase ThiF; PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; thiazole biosynthesis adenylyltransferase ThiF 4568942..4569697 Escherichia coli KO11FL 11778936 YP_005279952.1 CDS EKO11_4330 NC_016902.1 4569681 4569881 D KEGG: eoh:ECO103_4740 sulfur carrier protein ThiS; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; thiamine biosynthesis protein ThiS 4569681..4569881 Escherichia coli KO11FL 11778937 YP_005279953.1 CDS EKO11_4331 NC_016902.1 4569883 4570653 D PFAM: thiazole biosynthesis family protein; KEGG: eoh:ECO103_4739 thiazole synthase; thiazole biosynthesis family protein 4569883..4570653 Escherichia coli KO11FL 11778938 YP_005279954.1 CDS EKO11_4332 NC_016902.1 4570650 4571783 D KEGG: eoi:ECO111_4806 thiamine biosynthesis protein ThiH; TIGRFAM: thiazole biosynthesis protein ThiH; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; thiazole biosynthesis protein ThiH 4570650..4571783 Escherichia coli KO11FL 11778939 YP_005279955.1 CDS EKO11_4333 NC_016902.1 4572024 4576247 R TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; RNA polymerase Rpb1 domain 5; KEGG: sbo:SBO_4008 DNA-directed RNA polymerase subunit beta'; SMART: RNA polymerase I subunit A domain protein; DNA-directed RNA polymerase subunit beta' complement(4572024..4576247) Escherichia coli KO11FL 11778940 YP_005279956.1 CDS EKO11_4334 NC_016902.1 4576324 4580352 R KEGG: sbc:SbBS512_E4475 DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2 domain 3; RNA polymerase beta subunit; RNA polymerase Rpb2 domain 2; RNA polymerase Rpb2 domain 7; DNA-directed RNA polymerase subunit beta complement(4576324..4580352) Escherichia coli KO11FL 11778941 YP_005279957.1 CDS EKO11_4335 NC_016902.1 4580672 4581037 R KEGG: sdy:SDY_3742 50S ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12; 50S ribosomal protein L7/L12 complement(4580672..4581037) Escherichia coli KO11FL 11779789 YP_005279958.1 CDS EKO11_4336 NC_016902.1 4581104 4581601 R PFAM: ribosomal protein L10; KEGG: sdy:SDY_3743 50S ribosomal protein L10; 50S ribosomal protein L10 complement(4581104..4581601) Escherichia coli KO11FL 11778942 YP_005279959.1 CDS EKO11_4337 NC_016902.1 4582014 4582718 R KEGG: sdy:SDY_3744 50S ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1; 50S ribosomal protein L1 complement(4582014..4582718) Escherichia coli KO11FL 11778943 YP_005279960.1 CDS EKO11_4338 NC_016902.1 4582722 4583150 R TIGRFAM: ribosomal protein L11; PFAM: Ribosomal protein L11-like; KEGG: sdy:SDY_3745 50S ribosomal protein L11; SMART: ribosomal protein L11; 50S ribosomal protein L11 complement(4582722..4583150) Escherichia coli KO11FL 11778944 YP_005279961.1 CDS EKO11_4339 NC_016902.1 4583309 4583854 R TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain-containing protein; KOW domain protein; KEGG: sdy:SDY_3746 transcription antitermination protein NusG; SMART: NGN domain-containing protein; KOW domain protein; NusG antitermination factor complement(4583309..4583854) Escherichia coli KO11FL 11778945 YP_005279962.1 CDS EKO11_4340 NC_016902.1 4583856 4584239 R KEGG: sbc:SbBS512_E4469 preprotein translocase subunit SecE; TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; Preprotein translocase subunit SecE complement(4583856..4584239) Escherichia coli KO11FL 11779790 YP_005279963.1 CDS EKO11_4341 NC_016902.1 4584469 4585653 R KEGG: sbc:SbBS512_E4468 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain-containing protein; translation elongation factor Tu complement(4584469..4585653) Escherichia coli KO11FL 11778946 YP_005279964.1 CDS EKO11_4342 NC_016902.1 4586415 4587521 D KEGG: sfv:SFV_4047 pantothenate kinase; manually curated; TIGRFAM: pantothenate kinase; pantothenate kinase 4586415..4587521 Escherichia coli KO11FL 11778951 YP_005279965.1 CDS EKO11_4343 NC_016902.1 4587550 4588515 R TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; biotin operon repressor; KEGG: efe:EFER_3778 biotin--protein ligase; PFAM: biotin/lipoate A/B protein ligase; biotin protein ligase domain protein; bifunctional biotin operon repressor/biotin--acetyl-CoA-carboxylase ligase BirA complement(4587550..4588515) Escherichia coli KO11FL 11778952 YP_005279966.1 CDS EKO11_4344 NC_016902.1 4588512 4589540 R KEGG: eoh:ECO103_4726 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain-containing protein; FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase complement(4588512..4589540) Escherichia coli KO11FL 11778953 YP_005279967.1 CDS EKO11_4345 NC_016902.1 4595311 4596168 R TIGRFAM: glutamate racemase; KEGG: eoh:ECO103_4725 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; glutamate racemase complement(4595311..4596168) Escherichia coli KO11FL 11778957 YP_005279968.1 CDS EKO11_4346 NC_016902.1 4596113 4597957 R KEGG: ssn:SSON_4139 vitamin B12/cobalamin outer membrane transporter; TIGRFAM: TonB-dependent vitamin B12 receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; TonB-dependent vitamin B12 receptor complement(4596113..4597957) Escherichia coli KO11FL 11778958 YP_005279969.1 CDS EKO11_4347 NC_016902.1 4598326 4599426 D KEGG: ebd:ECBD_4059 tRNA (uracil-5-)-methyltransferase; TIGRFAM: tRNA (uracil-5-)-methyltransferase; PFAM: (Uracil-5)-methyltransferase; tRNA (uracil-5-)-methyltransferase 4598326..4599426 Escherichia coli KO11FL 11778959 YP_005279970.1 CDS EKO11_4348 NC_016902.1 4599466 4599825 R PFAM: protein of unknown function DUF1422; KEGG: sbc:SbBS512_E4450 hypothetical protein; hypothetical protein complement(4599466..4599825) Escherichia coli KO11FL 11778960 YP_005279971.1 CDS EKO11_4349 NC_016902.1 4599825 4600529 R PFAM: regulatory protein TetR; KEGG: sdy:SDY_3765 DNA-binding transcriptional repressor FabR; regulatory protein TetR complement(4599825..4600529) Escherichia coli KO11FL 11778961 YP_005279972.1 CDS EKO11_4350 NC_016902.1 4600806 4602206 D PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: efe:EFER_3800 soluble pyridine nucleotide transhydrogenase; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 4600806..4602206 Escherichia coli KO11FL 11778962 YP_005279973.1 CDS EKO11_4351 NC_016902.1 4602189 4603106 R PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sdy:SDY_3796 DNA-binding transcriptional regulator OxyR; LysR family transcriptional regulator complement(4602189..4603106) Escherichia coli KO11FL 11778963 YP_005279974.1 CDS EKO11_4352 NC_016902.1 4603373 4604746 R KEGG: eoi:ECO111_4785 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; argininosuccinate lyase complement(4603373..4604746) Escherichia coli KO11FL 11779792 YP_005279975.1 CDS EKO11_4353 NC_016902.1 4604807 4605583 R KEGG: ebd:ECBD_4065 acetylglutamate kinase; TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; acetylglutamate kinase complement(4604807..4605583) Escherichia coli KO11FL 11779793 YP_005279976.1 CDS EKO11_4354 NC_016902.1 4605591 4606595 R TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: ebd:ECBD_4066 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; N-acetyl-gamma-glutamyl-phosphate reductase complement(4605591..4606595) Escherichia coli KO11FL 11778964 YP_005279977.1 CDS EKO11_4355 NC_016902.1 4606749 4607900 D KEGG: eoh:ECO103_4713 acetylornithine deacetylase; TIGRFAM: acetylornithine deacetylase (ArgE); PFAM: peptidase M20; peptidase dimerisation domain protein; acetylornithine deacetylase 4606749..4607900 Escherichia coli KO11FL 11778965 YP_005279978.1 CDS EKO11_4356 NC_016902.1 4608252 4610903 D KEGG: ssn:SSON_4129 phosphoenolpyruvate carboxylase; PFAM: Phosphoenolpyruvate carboxylase, C-terminal region; phosphoenolpyruvate carboxylase 4608252..4610903 Escherichia coli KO11FL 11778966 YP_005279979.1 CDS EKO11_4357 NC_016902.1 4611086 4612819 D PFAM: sulfatase; KEGG: sbc:SbBS512_E4441 hypothetical protein; sulfatase 4611086..4612819 Escherichia coli KO11FL 11778967 YP_005279980.1 CDS EKO11_4358 NC_016902.1 4612968 4613819 D KEGG: ebd:ECBD_4070 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator 4612968..4613819 Escherichia coli KO11FL 11778968 YP_005279981.1 CDS EKO11_4359 NC_016902.1 4613806 4614147 R KEGG: sbc:SbBS512_E4440 putative fructose-like phosphotransferase EIIB subunit 3; TIGRFAM: PTS system, fructose-specific, IIB subunnit; PTS system fructose-specific transporter subunit IIB complement(4613806..4614147) Escherichia coli KO11FL 11778969 YP_005279982.1 CDS EKO11_4360 NC_016902.1 4614149 4615027 R TIGRFAM: glycyl-radical enzyme activating protein family; KEGG: ssn:SSON_4125 pyruvate formate lyase II activase; PFAM: Radical SAM domain protein; glycyl-radical enzyme activating protein family complement(4614149..4615027) Escherichia coli KO11FL 11778970 YP_005279983.1 CDS EKO11_4361 NC_016902.1 4614993 4617290 R TIGRFAM: pyruvate formate-lyase; KEGG: eoh:ECO103_4707 putative formate acetyltransferase 2; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical; pyruvate formate-lyase complement(4614993..4617290) Escherichia coli KO11FL 11778971 YP_005279984.1 CDS EKO11_4362 NC_016902.1 4617341 4617661 R KEGG: sdy:SDY_3785 putative fructose-like phosphotransferase EIIB subunit 2; TIGRFAM: PTS system, fructose-specific, IIB subunnit; PTS system fructose-specific transporter subunit IIB complement(4617341..4617661) Escherichia coli KO11FL 11778972 YP_005279985.1 CDS EKO11_4363 NC_016902.1 4617676 4618755 R KEGG: ebd:ECBD_4075 putative fructose-like permease EIIC subunit 2; TIGRFAM: PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system EIIC; PTS system fructose subfamily transporter subunit IIC complement(4617676..4618755) Escherichia coli KO11FL 11778973 YP_005279986.1 CDS EKO11_4364 NC_016902.1 4619064 4621565 D KEGG: eoh:ECO103_4704 fused putative PTS enzymes PtsA: HPr component/enzyme I component/enzyme IIA component; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; phosphoryl transfer system HPr; PEP-utilising protein domain protein; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphoenolpyruvate-protein phosphotransferase 4619064..4621565 Escherichia coli KO11FL 11778974 YP_005279987.1 CDS EKO11_4365 NC_016902.1 4621577 4622239 D TIGRFAM: transaldolase; KEGG: sbo:SBO_3966 fructose-6-phosphate aldolase; PFAM: Transaldolase; transaldolase 4621577..4622239 Escherichia coli KO11FL 11779794 YP_005279988.1 CDS EKO11_4366 NC_016902.1 4622250 4623353 D PFAM: iron-containing alcohol dehydrogenase; KEGG: ebd:ECBD_4078 glycerol dehydrogenase; iron-containing alcohol dehydrogenase 4622250..4623353 Escherichia coli KO11FL 11778975 YP_005279989.1 CDS EKO11_4367 NC_016902.1 4623628 4624245 D PFAM: protein of unknown function DUF1287; KEGG: eoh:ECO103_4701 hypothetical protein; hypothetical protein 4623628..4624245 Escherichia coli KO11FL 11778976 YP_005279990.1 CDS EKO11_4368 NC_016902.1 4624272 4625210 R KEGG: sbo:SBO_3963 hypothetical protein; manually curated; PFAM: protein of unknown function DUF6 transmembrane; hypothetical protein complement(4624272..4625210) Escherichia coli KO11FL 11778977 YP_005279991.1 CDS EKO11_4369 NC_016902.1 4625271 4627451 R KEGG: sfv:SFV_4012 catalase; hydroperoxidase HPI(I); TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase; catalase/peroxidase HPI complement(4625271..4627451) Escherichia coli KO11FL 11778978 YP_005279992.1 CDS EKO11_4370 NC_016902.1 4627780 4628670 R TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: sbc:SbBS512_E4428 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase complement(4627780..4628670) Escherichia coli KO11FL 11779795 YP_005279993.1 CDS EKO11_4371 NC_016902.1 4629019 4631451 R KEGG: sbo:SBO_3960 bifunctional aspartate kinase II/homoserine dehydrogenase II; TIGRFAM: aspartate kinase; PFAM: homoserine dehydrogenase; aspartate/glutamate/uridylate kinase; homoserine dehydrogenase NAD-binding; aspartate kinase complement(4629019..4631451) Escherichia coli KO11FL 11778979 YP_005279994.1 CDS EKO11_4372 NC_016902.1 4631454 4632614 R KEGG: ssn:SSON_4113 cystathionine gamma-synthase; TIGRFAM: O-succinylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; O-succinylhomoserine (thiol)-lyase complement(4631454..4632614) Escherichia coli KO11FL 11778980 YP_005279995.1 CDS EKO11_4373 NC_016902.1 4632891 4633208 D PFAM: Methionine repressor MetJ; KEGG: sdy:SDY_3773 transcriptional repressor protein MetJ; methionine repressor MetJ 4632891..4633208 Escherichia coli KO11FL 11778981 YP_005279996.1 CDS EKO11_4374 NC_016902.1 4633456 4634436 D PFAM: transposase IS116/IS110/IS902 family protein; KEGG: eoh:ECO103_4940 putative IS621 transposase; transposase IS116/IS110/IS902 family protein 4633456..4634436 Escherichia coli KO11FL 11778982 YP_005279997.1 CDS EKO11_4375 NC_016902.1 4634671 4635279 D KEGG: ebd:ECBD_4086 putative peptidoglycan peptidase; putative peptidoglycan peptidase 4634671..4635279 Escherichia coli KO11FL 11778983 YP_005279998.1 CDS EKO11_4377 NC_016902.1 4636186 4636509 R KEGG: eok:G2583_4745 hypothetical protein; hypothetical protein complement(4636186..4636509) Escherichia coli KO11FL 11778985 YP_005279999.1 CDS EKO11_4378 NC_016902.1 4636511 4640683 R KEGG: eoh:ECO103_4641 rhs core protein with extension; TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein; YD repeat protein complement(4636511..4640683) Escherichia coli KO11FL 11778986 YP_005280000.1 CDS EKO11_4379 NC_016902.1 4640843 4641055 R KEGG: sdy:SDY_3801 50S ribosomal protein L31; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; 50S ribosomal protein L31 complement(4640843..4641055) Escherichia coli KO11FL 11778987 YP_005280001.1 CDS EKO11_4380 NC_016902.1 4641258 4643456 D TIGRFAM: primosomal protein N'; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: eoh:ECO103_4593 primosome assembly protein PriA; SMART: DEAD-like helicase ; helicase domain protein; primosomal protein N' 4641258..4643456 Escherichia coli KO11FL 11778988 YP_005280002.1 CDS EKO11_4381 NC_016902.1 4643612 4644637 D KEGG: sbc:SbBS512_E4416 DNA-binding transcriptional regulator CytR; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; LacI family transcriptional regulator 4643612..4644637 Escherichia coli KO11FL 11778989 YP_005280003.1 CDS EKO11_4382 NC_016902.1 4644729 4645688 D manually curated; TIGRFAM: cell division protein FtsN; KEGG: sbc:SbBS512_E4415 essential cell division protein FtsN; PFAM: Sporulation domain-containing protein; chaperone DnaJ domain protein; cell division protein FtsN 4644729..4645688 Escherichia coli KO11FL 11778990 YP_005280004.1 CDS EKO11_4383 NC_016902.1 4645781 4646311 D PFAM: 20S proteasome A and B subunits; KEGG: sdy:SDY_3805 ATP-dependent protease peptidase subunit; 20S proteasome A and B subunits 4645781..4646311 Escherichia coli KO11FL 11778991 YP_005280005.1 CDS EKO11_4384 NC_016902.1 4646321 4647652 D TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: ATPase AAA-2 domain protein; KEGG: eoh:ECO103_4597 ATP-dependent protease ATP-binding subunit HslU; SMART: AAA ATPase; heat shock protein HslVU, ATPase subunit HslU 4646321..4647652 Escherichia coli KO11FL 11778992 YP_005280006.1 CDS EKO11_4385 NC_016902.1 4647719 4648645 D KEGG: ebd:ECBD_4094 1,4-dihydroxy-2-naphthoate octaprenyltransferase; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 4647719..4648645 Escherichia coli KO11FL 11778993 YP_005280007.1 CDS EKO11_4386 NC_016902.1 4648738 4649223 D KEGG: sbc:SbBS512_E4411 ribonuclease activity regulator protein RraA; TIGRFAM: regulator of ribonuclease activity A; PFAM: Dimethylmenaquinone methyltransferase; ribonuclease activity A regulator 4648738..4649223 Escherichia coli KO11FL 11778994 YP_005280008.1 CDS EKO11_4387 NC_016902.1 4649308 4649547 R PFAM: protein of unknown function DUF904; KEGG: sdy:SDY_3816 hypothetical protein; hypothetical protein complement(4649308..4649547) Escherichia coli KO11FL 11778995 YP_005280009.1 CDS EKO11_4388 NC_016902.1 4649978 4650823 D KEGG: ssn:SSON_4096 facilitated diffusion of glycerol; TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; MIP family channel protein 4649978..4650823 Escherichia coli KO11FL 11778996 YP_005280010.1 CDS EKO11_4389 NC_016902.1 4650846 4652354 D KEGG: sbo:SBO_3943 glycerol kinase; TIGRFAM: glycerol kinase; PFAM: Carbohydrate kinase, FGGY-like; glycerol kinase 4650846..4652354 Escherichia coli KO11FL 11779796 YP_005280011.1 CDS EKO11_4391 NC_016902.1 4653596 4654342 D PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: sdy:SDY_3820 ferredoxin-NADP reductase; oxidoreductase FAD/NAD(P)-binding domain-containing protein 4653596..4654342 Escherichia coli KO11FL 11778998 YP_005280012.1 CDS EKO11_4392 NC_016902.1 4654347 4654775 R PFAM: UspA domain-containing protein; KEGG: sbc:SbBS512_E4405 universal stress protein UspD; UspA domain-containing protein complement(4654347..4654775) Escherichia coli KO11FL 11778999 YP_005280013.1 CDS EKO11_4393 NC_016902.1 4654802 4655101 R PFAM: Conserved hypothetical protein CHP00743; KEGG: sbc:SbBS512_E4404 hypothetical protein; hypothetical protein complement(4654802..4655101) Escherichia coli KO11FL 11779000 YP_005280014.1 CDS EKO11_4394 NC_016902.1 4655313 4655753 R PFAM: protein of unknown function DUF805; KEGG: eoh:ECO103_4607 hypothetical protein; hypothetical protein complement(4655313..4655753) Escherichia coli KO11FL 11779001 YP_005280015.1 CDS EKO11_4395 NC_016902.1 4655854 4656453 D PFAM: protein of unknown function DUF1454; KEGG: sbc:SbBS512_E4400 hypothetical protein; hypothetical protein 4655854..4656453 Escherichia coli KO11FL 11779002 YP_005280016.1 CDS EKO11_4396 NC_016902.1 4656561 4657328 D TIGRFAM: triosephosphate isomerase; KEGG: sdy:SDY_3826 triosephosphate isomerase; PFAM: triosephosphate isomerase; triosephosphate isomerase 4656561..4657328 Escherichia coli KO11FL 11779003 YP_005280017.1 CDS EKO11_4397 NC_016902.1 4657383 4658138 R TIGRFAM: CDP-diacylglycerol pyrophosphatase; KEGG: sfv:SFV_3576 CDP-diacylglycerol pyrophosphatase; PFAM: CDP-diacylglycerol pyrophosphatase; CDP-diacylglycerol pyrophosphatase complement(4657383..4658138) Escherichia coli KO11FL 11779004 YP_005280018.1 CDS EKO11_4398 NC_016902.1 4658245 4659234 R KEGG: ssn:SSON_4086 sulfate transporter subunit; TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1; sulfate ABC transporter, periplasmic sulfate-binding protein complement(4658245..4659234) Escherichia coli KO11FL 11779005 YP_005280019.1 CDS EKO11_4399 NC_016902.1 4659554 4660612 R manually curated; TIGRFAM: 6-phosphofructokinase; KEGG: sfv:SFV_3578 6-phosphofructokinase; PFAM: phosphofructokinase; 6-phosphofructokinase complement(4659554..4660612) Escherichia coli KO11FL 11779006 YP_005280020.1 CDS EKO11_4400 NC_016902.1 4660697 4661599 R KEGG: sdy:SDY_3832 ferrous iron efflux protein F; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; cation diffusion facilitator family transporter complement(4660697..4661599) Escherichia coli KO11FL 11779007 YP_005280021.1 CDS EKO11_4401 NC_016902.1 4661836 4662054 R PFAM: transcriptional activator Ogr/delta; KEGG: ebr:ECB_01987 DNA-binding transcriptional regulator; transcriptional activator Ogr/delta complement(4661836..4662054) Escherichia coli KO11FL 11779797 YP_005280022.1 CDS EKO11_4402 NC_016902.1 4662136 4663299 R KEGG: etw:ECSP_2840 phage protein D; phage protein D complement(4662136..4663299) Escherichia coli KO11FL 11779008 YP_005280023.1 CDS EKO11_4403 NC_016902.1 4663299 4663778 R PFAM: P2 GpU family protein; KEGG: etw:ECSP_2841 phage protein gpU; P2 GpU family protein complement(4663299..4663778) Escherichia coli KO11FL 11779009 YP_005280024.1 CDS EKO11_4404 NC_016902.1 4663793 4666240 R KEGG: etw:ECSP_2842 phage related tail protein; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region; phage tail tape measure protein, TP901 family complement(4663793..4666240) Escherichia coli KO11FL 11779798 YP_005280025.1 CDS EKO11_4406 NC_016902.1 4666717 4667235 R KEGG: etw:ECSP_2844 phage tail tube protein FII; TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein; phage major tail tube protein complement(4666717..4667235) Escherichia coli KO11FL 11779011 YP_005280026.1 CDS EKO11_4407 NC_016902.1 4667248 4668438 R KEGG: etw:ECSP_2845 phage tail sheath protein FI; phage tail sheath protein FI complement(4667248..4668438) Escherichia coli KO11FL 11779012 YP_005280027.1 CDS EKO11_4408 NC_016902.1 4668758 4669657 R KEGG: shw:Sputw3181_3544 hypothetical protein; hypothetical protein complement(4668758..4669657) Escherichia coli KO11FL 11779013 YP_005280028.1 CDS EKO11_4409 NC_016902.1 4669873 4670400 R PFAM: tail assembly chaperone gp38; KEGG: cro:ROD_36591 phage tail fibre assembly protein; tail assembly chaperone gp38 complement(4669873..4670400) Escherichia coli KO11FL 11779799 YP_005280029.1 CDS EKO11_4410 NC_016902.1 4670404 4672413 R PFAM: tail fiber repeat 2 protein; KEGG: sbo:SBO_1394 putative bacteriophage tail protein; tail fiber repeat 2 protein complement(4670404..4672413) Escherichia coli KO11FL 11779014 YP_005280030.1 CDS EKO11_4411 NC_016902.1 4672424 4672954 R TIGRFAM: phage tail protein I; KEGG: ebr:ECB_01995 hypothetical protein; phage tail protein I complement(4672424..4672954) Escherichia coli KO11FL 11779015 YP_005280031.1 CDS EKO11_4412 NC_016902.1 4672947 4673855 R PFAM: Baseplate J family protein; KEGG: etw:ECSP_2852 baseplate assembly protein; baseplate J family protein complement(4672947..4673855) Escherichia coli KO11FL 11779800 YP_005280032.1 CDS EKO11_4413 NC_016902.1 4673860 4674207 R PFAM: GPW/gp25 family protein; KEGG: etw:ECSP_2853 phage baseplate protein; GPW/gp25 family protein complement(4673860..4674207) Escherichia coli KO11FL 11779016 YP_005280033.1 CDS EKO11_4414 NC_016902.1 4674204 4674839 R TIGRFAM: phage baseplate assembly protein V; KEGG: ebr:ECB_01998 hypothetical protein; phage baseplate assembly protein V complement(4674204..4674839) Escherichia coli KO11FL 11779017 YP_005280034.1 CDS EKO11_4415 NC_016902.1 4674906 4675358 R TIGRFAM: phage virion morphogenesis protein; KEGG: etw:ECSP_2855 phage tail protein; phage virion morphogenesis protein complement(4674906..4675358) Escherichia coli KO11FL 11779801 YP_005280035.1 CDS EKO11_4416 NC_016902.1 4675351 4675818 R KEGG: etw:ECSP_2856 P2 phage tail completion protein R, GpR; P2 phage tail completion protein R, GpR complement(4675351..4675818) Escherichia coli KO11FL 11779018 YP_005280036.1 CDS EKO11_4417 NC_016902.1 4675781 4675939 R KEGG: etw:ECSP_2857 phage lysis protein LysC; phage lysis protein LysC complement(4675781..4675939) Escherichia coli KO11FL 11779019 YP_005280037.1 CDS EKO11_4418 NC_016902.1 4675926 4676351 R TIGRFAM: phage lysis regulatory protein, LysB family; KEGG: etw:ECSP_2858 phage lysis timing protein LysB; phage lysis regulatory protein, LysB family complement(4675926..4676351) Escherichia coli KO11FL 11779020 YP_005280038.1 CDS EKO11_4419 NC_016902.1 4676339 4676764 R KEGG: etw:ECSP_2859 phage lysis protein LysA; phage lysis protein LysA complement(4676339..4676764) Escherichia coli KO11FL 11779021 YP_005280039.1 CDS EKO11_4420 NC_016902.1 4676779 4677276 R KEGG: etw:ECSP_2860 phage lysozyme; PFAM: glycoside hydrolase family 24; lysozyme complement(4676779..4677276) Escherichia coli KO11FL 11779022 YP_005280040.1 CDS EKO11_4421 NC_016902.1 4677276 4677557 R PFAM: holin family 2; KEGG: etw:ECSP_2861 hypothetical protein; holin family 2 complement(4677276..4677557) Escherichia coli KO11FL 11779023 YP_005280041.1 CDS EKO11_4422 NC_016902.1 4677561 4677764 R PFAM: tail X family protein; KEGG: etw:ECSP_2862 P2-like prophage tail protein X; tail X family protein complement(4677561..4677764) Escherichia coli KO11FL 11779024 YP_005280042.1 CDS EKO11_4423 NC_016902.1 4677764 4678273 R PFAM: head completion protein; KEGG: etw:ECSP_2863 capsid completion protein; head completion protein complement(4677764..4678273) Escherichia coli KO11FL 11779025 YP_005280043.1 CDS EKO11_4424 NC_016902.1 4678373 4679116 R PFAM: small terminase subunit; KEGG: etw:ECSP_2864 small terminase subunit; small terminase subunit complement(4678373..4679116) Escherichia coli KO11FL 11779802 YP_005280044.1 CDS EKO11_4425 NC_016902.1 4679120 4680193 R KEGG: etw:ECSP_2865 phage major capsid protein, P2 family; TIGRFAM: phage major capsid protein, P2 family; PFAM: major capsid protein P2; phage major capsid protein, P2 family complement(4679120..4680193) Escherichia coli KO11FL 11779026 YP_005280045.1 CDS EKO11_4426 NC_016902.1 4680252 4681106 R PFAM: capsid scaffolding; KEGG: etw:ECSP_2866 phage capsid scaffolding protein GpO; capsid scaffolding complement(4680252..4681106) Escherichia coli KO11FL 11779027 YP_005280046.1 CDS EKO11_4427 NC_016902.1 4681280 4683052 D KEGG: etw:ECSP_2867 phage large terminase subunit GpP; phage large terminase subunit GpP 4681280..4683052 Escherichia coli KO11FL 11779028 YP_005280047.1 CDS EKO11_4428 NC_016902.1 4683052 4684086 D KEGG: etw:ECSP_2868 phage capsid protein; TIGRFAM: phage portal protein, PBSX family; PFAM: portal protein; phage portal protein, PBSX family 4683052..4684086 Escherichia coli KO11FL 11779029 YP_005280048.1 CDS EKO11_4429 NC_016902.1 4684502 4685575 D KEGG: ent:Ent638_0467 hypothetical protein; hypothetical protein 4684502..4685575 Escherichia coli KO11FL 11779030 YP_005280049.1 CDS EKO11_4430 NC_016902.1 4685580 4686605 D KEGG: ent:Ent638_0468 hypothetical protein; hypothetical protein 4685580..4686605 Escherichia coli KO11FL 11779031 YP_005280050.1 CDS EKO11_4431 NC_016902.1 4686602 4687540 R KEGG: pam:PANA_3164 HsdRM; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; DNA-cytosine methyltransferase complement(4686602..4687540) Escherichia coli KO11FL 11779032 YP_005280051.1 CDS EKO11_4432 NC_016902.1 4687989 4688444 R PFAM: protein of unknown function DUF437; KEGG: see:SNSL254_A2943 GP91; hypothetical protein complement(4687989..4688444) Escherichia coli KO11FL 11779033 YP_005280052.1 CDS EKO11_4433 NC_016902.1 4688441 4690726 R PFAM: replication gene A; KEGG: etw:ECSP_2873 phage replication initiation protein; replication protein A complement(4688441..4690726) Escherichia coli KO11FL 11779034 YP_005280053.1 CDS EKO11_4434 NC_016902.1 4690716 4690991 R KEGG: ebr:ECB_02005 hypothetical protein; hypothetical protein complement(4690716..4690991) Escherichia coli KO11FL 11779035 YP_005280054.1 CDS EKO11_4435 NC_016902.1 4690988 4691212 R TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; KEGG: ebr:ECB_02006 hypothetical protein; phage/conjugal plasmid C-4 type zinc finger protein, TraR family complement(4690988..4691212) Escherichia coli KO11FL 11779036 YP_005280055.1 CDS EKO11_4436 NC_016902.1 4691212 4691514 R KEGG: ebr:ECB_02007 hypothetical protein; hypothetical protein complement(4691212..4691514) Escherichia coli KO11FL 11779037 YP_005280056.1 CDS EKO11_4437 NC_016902.1 4691514 4691738 R KEGG: etw:ECSP_2877 hypothetical protein; hypothetical protein complement(4691514..4691738) Escherichia coli KO11FL 11779038 YP_005280057.1 CDS EKO11_4438 NC_016902.1 4691802 4692302 R KEGG: etw:ECSP_2878 replication gene B protein; replication protein B complement(4691802..4692302) Escherichia coli KO11FL 11779039 YP_005280058.1 CDS EKO11_4439 NC_016902.1 4692299 4692496 R KEGG: etw:ECSP_2879 hypothetical protein; hypothetical protein complement(4692299..4692496) Escherichia coli KO11FL 11779040 YP_005280059.1 CDS EKO11_4440 NC_016902.1 4692472 4692744 R PFAM: Regulatory phage protein Cox; KEGG: see:SNSL254_A4349 Cox protein; Regulatory phage protein Cox complement(4692472..4692744) Escherichia coli KO11FL 11779041 YP_005280060.1 CDS EKO11_4441 NC_016902.1 4692897 4693190 D KEGG: eoj:ECO26_2442 putative repressor protein C; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; helix-turn-helix domain-containing protein 4692897..4693190 Escherichia coli KO11FL 11779042 YP_005280061.1 CDS EKO11_4442 NC_016902.1 4693260 4694240 D PFAM: integrase family protein; KEGG: see:SNSL254_A4348 site-specific recombinase, phage integrase family; integrase family protein 4693260..4694240 Escherichia coli KO11FL 11779043 YP_005280062.1 CDS EKO11_4443 NC_016902.1 4694426 4694926 R PFAM: protein of unknown function Spy-related; KEGG: sdy:SDY_3833 periplasmic repressor CpxP; hypothetical protein complement(4694426..4694926) Escherichia coli KO11FL 11779044 YP_005280063.1 CDS EKO11_4444 NC_016902.1 4695076 4695774 D KEGG: sdy:SDY_3834 DNA-binding transcriptional regulator CpxR; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; two component transcriptional regulator, winged helix family 4695076..4695774 Escherichia coli KO11FL 11779045 YP_005280064.1 CDS EKO11_4445 NC_016902.1 4695771 4697144 D KEGG: sbo:SBO_3929 two-component sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; integral membrane sensor signal transduction histidine kinase 4695771..4697144 Escherichia coli KO11FL 11779046 YP_005280065.1 CDS EKO11_4446 NC_016902.1 4697250 4697924 R PFAM: MOSC domain containing protein; 3-alpha domain protein; KEGG: sbo:SBO_3928 hypothetical protein; MOSC domain-containing protein complement(4697250..4697924) Escherichia coli KO11FL 11779047 YP_005280066.1 CDS EKO11_4447 NC_016902.1 4698073 4699056 R KEGG: ssn:SSON_4079 2-keto-3-deoxygluconate permease; TIGRFAM: 2-keto-3-deoxygluconate transporter; PFAM: 2-keto-3-deoxygluconate permease; 2-keto-3-deoxygluconate transporter complement(4698073..4699056) Escherichia coli KO11FL 11779048 YP_005280067.1 CDS EKO11_4448 NC_016902.1 4699316 4699936 R PFAM: Manganese/iron superoxide dismutase-like; KEGG: sbc:SbBS512_E4387 superoxide dismutase; manganese/iron superoxide dismutase-like protein complement(4699316..4699936) Escherichia coli KO11FL 11779049 YP_005280068.1 CDS EKO11_4449 NC_016902.1 4700221 4701255 D KEGG: sbc:SbBS512_E4385 rhamnose-proton symporter; TIGRFAM: L-rhamnose-proton symporter, RhaT family, DMT superfamily; PFAM: RhaT l-rhamnose-proton symport 2; L-rhamnose-proton symporter 4700221..4701255 Escherichia coli KO11FL 11779050 YP_005280069.1 CDS EKO11_4450 NC_016902.1 4701252 4702190 R KEGG: sfx:S3765 transcriptional activator RhaR; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(4701252..4702190) Escherichia coli KO11FL 11779051 YP_005280070.1 CDS EKO11_4451 NC_016902.1 4702174 4703010 R KEGG: sbo:SBO_3923 transcriptional activator RhaS; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; AraC family transcriptional regulator complement(4702174..4703010) Escherichia coli KO11FL 11779052 YP_005280071.1 CDS EKO11_4452 NC_016902.1 4703298 4704767 D KEGG: eoh:ECO103_4623 rhamnulokinase; TIGRFAM: rhamnulokinase; PFAM: Carbohydrate kinase, FGGY-like; rhamnulokinase 4703298..4704767 Escherichia coli KO11FL 11779803 YP_005280072.1 CDS EKO11_4453 NC_016902.1 4704764 4706023 D TIGRFAM: L-rhamnose isomerase; KEGG: ebw:BWG_3573 L-rhamnose isomerase; PFAM: L-rhamnose isomerase; L-rhamnose isomerase 4704764..4706023 Escherichia coli KO11FL 11779053 YP_005280073.1 CDS EKO11_4454 NC_016902.1 4706265 4707089 D TIGRFAM: rhamnulose-1-phosphate aldolase; KEGG: eoh:ECO103_4625 rhamnulose-1-phosphate aldolase; PFAM: class II aldolase/adducin family protein; rhamnulose-1-phosphate aldolase 4706265..4707089 Escherichia coli KO11FL 11779054 YP_005280074.1 CDS EKO11_4455 NC_016902.1 4707099 4707413 D KEGG: ssn:SSON_4071 hypothetical protein; TIGRFAM: L-rhamnose 1-epimerase; PFAM: protein of unknown function DUF718; L-rhamnose 1-epimerase 4707099..4707413 Escherichia coli KO11FL 11779804 YP_005280075.1 CDS EKO11_4456 NC_016902.1 4707714 4708160 D KEGG: sbo:SBO_3916 putative fructose-like phosphotransferase system subunit EIIA; TIGRFAM: PTS system, fructose subfamily, IIA subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; putative PTS IIA-like nitrogen-regulatory protein PtsN 4707714..4708160 Escherichia coli KO11FL 11779055 YP_005280076.1 CDS EKO11_4457 NC_016902.1 4708171 4709622 D TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose-specific, IIB subunnit; KEGG: eoh:ECO103_4628 putative PTS system transporter subunits IIBC; PFAM: phosphotransferase system EIIC; phosphotransferase system lactose/cellobiose-specific IIB subunit; PTS system fructose subfamily transporter subunit IIC 4708171..4709622 Escherichia coli KO11FL 11779056 YP_005280077.1 CDS EKO11_4458 NC_016902.1 4709612 4710682 D KEGG: eoh:ECO103_4629 putative fructose-specific phosphotransferase system protein FrvX; PFAM: peptidase M42 family protein; cellulase 4709612..4710682 Escherichia coli KO11FL 11779057 YP_005280078.1 CDS EKO11_4459 NC_016902.1 4710682 4712430 D PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: ssn:SSON_4067 putative frv operon regulatory protein; transcriptional antiterminator BglG 4710682..4712430 Escherichia coli KO11FL 11779058 YP_005280079.1 CDS EKO11_4460 NC_016902.1 4712480 4713520 R KEGG: eoh:ECO103_4631 hypothetical protein; hypothetical protein complement(4712480..4713520) Escherichia coli KO11FL 11779059 YP_005280080.1 CDS EKO11_4461 NC_016902.1 4713673 4714506 R KEGG: eok:G2583_4699 ApaG; TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; formate dehydrogenase family accessory protein FdhD complement(4713673..4714506) Escherichia coli KO11FL 11779060 YP_005280081.1 CDS EKO11_4462 NC_016902.1 4714700 4715287 D PFAM: molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; KEGG: sbo:SBO_3908 formate dehydrogenase-O, major subunit; molybdopterin oxidoreductase Fe4S4 region 4714700..4715287 Escherichia coli KO11FL 11779061 YP_005280082.1 CDS EKO11_4463 NC_016902.1 4715336 4717750 D TIGRFAM: formate dehydrogenase, alpha subunit; KEGG: ssn:SSON_4063 formate dehydrogenase-O, major subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; formate dehydrogenase subunit alpha 4715336..4717750 Escherichia coli KO11FL 11779062 YP_005280083.1 CDS EKO11_4464 NC_016902.1 4717763 4718665 D KEGG: sbc:SbBS512_E4372 formate dehydrogenase-O, iron-sulfur subunit; TIGRFAM: formate dehydrogenase, beta subunit; PFAM: Formate dehydrogenase transmembrane domain protein; formate dehydrogenase subunit beta 4717763..4718665 Escherichia coli KO11FL 11779063 YP_005280084.1 CDS EKO11_4465 NC_016902.1 4718662 4719297 D TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: sdy:SDY_3851 formate dehydrogenase-O subunit gamma; formate dehydrogenase subunit gamma 4718662..4719297 Escherichia coli KO11FL 11779064 YP_005280085.1 CDS EKO11_4466 NC_016902.1 4719294 4720223 D KEGG: sdy:SDY_3852 formate dehydrogenase accessory protein FdhE; TIGRFAM: formate dehydrogenase accessory protein FdhE; PFAM: formate dehydrogenase accessory protein; formate dehydrogenase accessory protein FdhE 4719294..4720223 Escherichia coli KO11FL 11779065 YP_005280086.1 CDS EKO11_4467 NC_016902.1 4720443 4720553 R KEGG: ebd:ECBD_4135 hypothetical protein; hypothetical protein complement(4720443..4720553) Escherichia coli KO11FL 11779066 YP_005280087.1 CDS EKO11_4468 NC_016902.1 4720553 4720795 R KEGG: sbc:SbBS512_E4369 hypothetical protein; hypothetical protein complement(4720553..4720795) Escherichia coli KO11FL 11779067 YP_005280088.1 CDS EKO11_4469 NC_016902.1 4721014 4721232 R KEGG: sfv:SFV_3606 hypothetical protein; hypothetical protein complement(4721014..4721232) Escherichia coli KO11FL 11779068 YP_005280089.1 CDS EKO11_4470 NC_016902.1 4721659 4721751 R hypothetical protein complement(4721659..4721751) Escherichia coli KO11FL 11779069 YP_005280090.1 CDS EKO11_4471 NC_016902.1 4721837 4722127 R KEGG: eoh:ECO103_4280 putative DNA-binding transcriptional regulator, MerR family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; transcriptional regulator, XRE family complement(4721837..4722127) Escherichia coli KO11FL 11779070 YP_005280091.1 CDS EKO11_4472 NC_016902.1 4722128 4722439 R KEGG: eoh:ECO103_4281 hypothetical protein; hypothetical protein complement(4722128..4722439) Escherichia coli KO11FL 11779071 YP_005280092.1 CDS EKO11_4473 NC_016902.1 4722668 4723576 D KEGG: eoh:ECO103_4282 putative lipase; putative lipase 4722668..4723576 Escherichia coli KO11FL 11779072 YP_005280093.1 CDS EKO11_4474 NC_016902.1 4723640 4724581 R KEGG: sbo:SBO_3902 putative acetyltransferase; TIGRFAM: thioesterase domain protein; PFAM: Thioesterase putative; GCN5-related N-acetyltransferase; thioesterase domain-containing protein complement(4723640..4724581) Escherichia coli KO11FL 11779073 YP_005280094.1 CDS EKO11_4475 NC_016902.1 4724626 4725063 R KEGG: sbc:SbBS512_E4365 D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase; D-tyrosyl-tRNA(Tyr) deacylase complement(4724626..4725063) Escherichia coli KO11FL 11779074 YP_005280095.1 CDS EKO11_4476 NC_016902.1 4725060 4725932 R KEGG: sdy:SDY_3857 ribonuclease BN; TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; ribonuclease BN complement(4725060..4725932) Escherichia coli KO11FL 11779075 YP_005280096.1 CDS EKO11_4477 NC_016902.1 4725926 4726525 R KEGG: sbc:SbBS512_E4363 phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase complement(4725926..4726525) Escherichia coli KO11FL 11779076 YP_005280097.1 CDS EKO11_4478 NC_016902.1 4726624 4727409 R KEGG: ebd:ECBD_4143 transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR; DeoR family transcriptional regulator complement(4726624..4727409) Escherichia coli KO11FL 11779077 YP_005280098.1 CDS EKO11_4479 NC_016902.1 4727443 4728339 R PFAM: PfkB domain protein; KEGG: ebd:ECBD_4144 PfkB domain protein; PfkB domain-containing protein complement(4727443..4728339) Escherichia coli KO11FL 11779078 YP_005280099.1 CDS EKO11_4480 NC_016902.1 4728507 4729403 D KEGG: sfv:SFV_3617 putative dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 3-hydroxyisobutyrate dehydrogenase 4728507..4729403 Escherichia coli KO11FL 11779805 YP_005280100.1 CDS EKO11_4481 NC_016902.1 4729427 4730305 D PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: ebd:ECBD_4146 deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase 4729427..4730305 Escherichia coli KO11FL 11779806 YP_005280101.1 CDS EKO11_4482 NC_016902.1 4730322 4731563 D PFAM: N-acylglucosamine 2-epimerase; KEGG: ebd:ECBD_4147 N-acylglucosamine 2-epimerase; N-acylglucosamine 2-epimerase 4730322..4731563 Escherichia coli KO11FL 11779079 YP_005280102.1 CDS EKO11_4483 NC_016902.1 4731677 4732603 D PFAM: Aldose 1-epimerase; KEGG: sfv:SFV_3620 putative aldose-1-epimerase; aldose 1-epimerase 4731677..4732603 Escherichia coli KO11FL 11779080 YP_005280103.1 CDS EKO11_4484 NC_016902.1 4732802 4734838 D PFAM: glycoside hydrolase family 31; KEGG: ebw:BWG_3548 alpha-glucosidase; glycoside hydrolase family protein 4732802..4734838 Escherichia coli KO11FL 11779081 YP_005280104.1 CDS EKO11_4485 NC_016902.1 4734884 4736269 D TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; KEGG: ebw:BWG_3547 putative transporter; sugar (Glycoside-Pentoside-Hexuronide) transporter 4734884..4736269 Escherichia coli KO11FL 11779082 YP_005280105.1 CDS EKO11_4486 NC_016902.1 4736312 4737715 D TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; KEGG: eoh:ECO103_4295 putative transporter; sugar (Glycoside-Pentoside-Hexuronide) transporter 4736312..4737715 Escherichia coli KO11FL 11779083 YP_005280106.1 CDS EKO11_4487 NC_016902.1 4737783 4738475 D PFAM: Oligogalacturonate-specific porin; KEGG: eoh:ECO103_4296 outer membrane porin L; Oligogalacturonate-specific porin 4737783..4738475 Escherichia coli KO11FL 11779084 YP_005280107.1 CDS EKO11_4488 NC_016902.1 4738566 4739831 R PFAM: major facilitator superfamily MFS_1; KEGG: ebd:ECBD_4153 sugar phosphate permease-like protein; major facilitator superfamily protein complement(4738566..4739831) Escherichia coli KO11FL 11779085 YP_005280108.1 CDS EKO11_4489 NC_016902.1 4739933 4740913 R PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: eoh:ECO103_4298 putative sugar phosphate isomerase; xylose isomerase domain-containing protein complement(4739933..4740913) Escherichia coli KO11FL 11779086 YP_005280109.1 CDS EKO11_4490 NC_016902.1 4740921 4741631 R KEGG: ebd:ECBD_4155 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain-containing protein; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator complement(4740921..4741631) Escherichia coli KO11FL 11779087 YP_005280110.1 CDS EKO11_4491 NC_016902.1 4741848 4743671 R KEGG: sdy:SDY_3872 GTP-binding protein; TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein; GTP-binding protein TypA complement(4741848..4743671) Escherichia coli KO11FL 11779088 YP_005280111.1 CDS EKO11_4492 NC_016902.1 4744044 4745453 D KEGG: sdy:SDY_3873 glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; glutamine synthetase, type I 4744044..4745453 Escherichia coli KO11FL 11779089 YP_005280112.1 CDS EKO11_4493 NC_016902.1 4745494 4745673 R KEGG: plu:plu4427 hypothetical protein; hypothetical protein complement(4745494..4745673) Escherichia coli KO11FL 11779090 YP_005280113.1 CDS EKO11_4494 NC_016902.1 4745772 4746821 D KEGG: ssn:SSON_4041 nitrogen regulation protein NR(II); PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; signal transduction histidine kinase, nitrogen specific, NtrB 4745772..4746821 Escherichia coli KO11FL 11779091 YP_005280114.1 CDS EKO11_4495 NC_016902.1 4746833 4748242 D TIGRFAM: nitrogen regulation protein NR(I); PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; KEGG: sdy:SDY_3875 nitrogen regulation protein NR(I); SMART: response regulator receiver; AAA ATPase; Fis family nitrogen metabolism transcriptional regulator NtrC 4746833..4748242 Escherichia coli KO11FL 11779092 YP_005280115.1 CDS EKO11_4496 NC_016902.1 4748354 4748464 D KEGG: ebd:ECBD_4160 hypothetical protein; hypothetical protein 4748354..4748464 Escherichia coli KO11FL 11779093 YP_005280116.1 CDS EKO11_4497 NC_016902.1 4748654 4750027 R TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; KEGG: sbc:SbBS512_E4342 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB; oxygen-independent coproporphyrinogen III oxidase complement(4748654..4750027) Escherichia coli KO11FL 11779094 YP_005280117.1 CDS EKO11_4498 NC_016902.1 4750216 4750725 R PFAM: protein of unknown function DUF414; KEGG: sbc:SbBS512_E4340 hypothetical protein; hypothetical protein complement(4750216..4750725) Escherichia coli KO11FL 11779095 YP_005280118.1 CDS EKO11_4499 NC_016902.1 4751307 4751939 D KEGG: sdy:SDY_3878 ribosome biogenesis GTP-binding protein YsxC; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; PFAM: GTP-binding protein HSR1-related; ribosome biogenesis GTP-binding protein YsxC 4751307..4751939 Escherichia coli KO11FL 11779096 YP_005280119.1 CDS EKO11_4500 NC_016902.1 4752321 4755107 R TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; KEGG: sbc:SbBS512_E4337 DNA polymerase I; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; 3'-5' exonuclease; DNA-directed DNA polymerase; DNA polymerase I complement(4752321..4755107) Escherichia coli KO11FL 11779097 YP_005280120.1 CDS EKO11_4501 NC_016902.1 4755166 4755351 D KEGG: sbc:SbBS512_E4336 hypothetical protein; hypothetical protein 4755166..4755351 Escherichia coli KO11FL 11779098 YP_005280121.1 CDS EKO11_4502 NC_016902.1 4755471 4756403 D KEGG: sbo:SBO_3875 putative acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; phospholipid/glycerol acyltransferase 4755471..4756403 Escherichia coli KO11FL 11779807 YP_005280122.1 CDS EKO11_4503 NC_016902.1 4756444 4757874 R PFAM: protein of unknown function DUF945; KEGG: eoi:ECO111_4682 hypothetical protein; hypothetical protein complement(4756444..4757874) Escherichia coli KO11FL 11779099 YP_005280123.1 CDS EKO11_4504 NC_016902.1 4758028 4758654 R PFAM: DSBA oxidoreductase; KEGG: sbc:SbBS512_E4332 periplasmic protein disulfide isomerase I; DSBA oxidoreductase complement(4758028..4758654) Escherichia coli KO11FL 11779100 YP_005280124.1 CDS EKO11_4505 NC_016902.1 4758671 4759657 R PFAM: aminoglycoside phosphotransferase; KEGG: eok:G2583_4657 putative kinase; aminoglycoside phosphotransferase complement(4758671..4759657) Escherichia coli KO11FL 11779101 YP_005280125.1 CDS EKO11_4506 NC_016902.1 4759734 4760003 R PFAM: protein of unknown function DUF1040; KEGG: sdy:SDY_3887 hypothetical protein; hypothetical protein complement(4759734..4760003) Escherichia coli KO11FL 11779102 YP_005280126.1 CDS EKO11_4507 NC_016902.1 4760073 4760657 D TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: eoh:ECO103_4313 molybdopterin-guanine dinucleotide biosynthesis protein MobA; molybdopterin-guanine dinucleotide biosynthesis protein MobA 4760073..4760657 Escherichia coli KO11FL 11779103 YP_005280127.1 CDS EKO11_4508 NC_016902.1 4760639 4761166 D TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; KEGG: eoh:ECO103_4314 molybdopterin-guanine dinucleotide biosynthesis protein B; molybdopterin-guanine dinucleotide biosynthesis protein MobB 4760639..4761166 Escherichia coli KO11FL 11779104 YP_005280128.1 CDS EKO11_4509 NC_016902.1 4766749 4767294 R KEGG: eoi:ECO111_4676 protoporphyrinogen oxidase; PFAM: flavodoxin/nitric oxide synthase; Protoporphyrinogen oxidase complement(4766749..4767294) Escherichia coli KO11FL 11779110 YP_005280129.1 CDS EKO11_4510 NC_016902.1 4767306 4768757 R KEGG: sdy:SDY_3896 potassium transporter; TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; TrkH family potassium uptake protein complement(4767306..4768757) Escherichia coli KO11FL 11779111 YP_005280130.1 CDS EKO11_4511 NC_016902.1 4768796 4769410 R PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; Uncharacterised protein family UPF0029, Impact, C-terminal; KEGG: sdy:SDY_3897 hypothetical protein; hypothetical protein complement(4768796..4769410) Escherichia coli KO11FL 11779808 YP_005280131.1 CDS EKO11_4512 NC_016902.1 4769410 4770741 R KEGG: ebd:ECBD_4178 proline dipeptidase; PFAM: peptidase M24; Xaa-Pro dipeptidase complement(4769410..4770741) Escherichia coli KO11FL 11779809 YP_005280132.1 CDS EKO11_4513 NC_016902.1 4770931 4773120 D KEGG: eoh:ECO103_4319 multifunctional fatty acid oxidation complex subunit alpha; TIGRFAM: fatty oxidation complex, alpha subunit FadB; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; fatty acid oxidation complex subunit FadB 4770931..4773120 Escherichia coli KO11FL 11779112 YP_005280133.1 CDS EKO11_4514 NC_016902.1 4773130 4774293 D KEGG: sbc:SbBS512_E4315 3-ketoacyl-CoA thiolase; TIGRFAM: acetyl-CoA C-acyltransferase FadA; acetyl-CoA acetyltransferase; PFAM: Thiolase-like; acetyl-CoA C-acyltransferase FadA 4773130..4774293 Escherichia coli KO11FL 11779113 YP_005280134.1 CDS EKO11_4515 NC_016902.1 4774485 4775186 R PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: ssn:SSON_4017 FMN reductase; oxidoreductase FAD/NAD(P)-binding domain-containing protein complement(4774485..4775186) Escherichia coli KO11FL 11779114 YP_005280135.1 CDS EKO11_4516 NC_016902.1 4775232 4776725 R KEGG: ssn:SSON_4016 3-octaprenyl-4-hydroxybenzoate decarboxylase; TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; UbiD family decarboxylase complement(4775232..4776725) Escherichia coli KO11FL 11779115 YP_005280136.1 CDS EKO11_4517 NC_016902.1 4776892 4777380 D TIGRFAM: transcriptional activator RfaH; PFAM: NGN domain-containing protein; KEGG: sdy:SDY_3903 transcriptional activator RfaH; SMART: NGN domain-containing protein; transcriptional acivator RfaH 4776892..4777380 Escherichia coli KO11FL 11779810 YP_005280137.1 CDS EKO11_4519 NC_016902.1 4778201 4778977 R KEGG: sbc:SbBS512_E4310 twin-arginine protein translocation system subunit TatC; TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; Sec-independent protein translocase subunit TatC complement(4778201..4778977) Escherichia coli KO11FL 11779117 YP_005280138.1 CDS EKO11_4520 NC_016902.1 4778980 4779495 R KEGG: ssn:SSON_4012 sec-independent translocase; TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106; twin-arginine translocation protein subunit TatB complement(4778980..4779495) Escherichia coli KO11FL 11779118 YP_005280139.1 CDS EKO11_4521 NC_016902.1 4779499 4779768 R KEGG: sdy:SDY_3907 twin arginine translocase protein A; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; twin-arginine translocation protein, TatA/E family subunit complement(4779499..4779768) Escherichia coli KO11FL 11779811 YP_005280140.1 CDS EKO11_4522 NC_016902.1 4779847 4781487 R KEGG: sdy:SDY_3908 putative ubiquinone biosynthesis protein UbiB; TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain-containing protein; 2-polyprenylphenol 6-hydroxylase complement(4779847..4781487) Escherichia coli KO11FL 11779119 YP_005280141.1 CDS EKO11_4523 NC_016902.1 4781484 4782089 R PFAM: Sterol-binding domain protein; KEGG: sbc:SbBS512_E4306 hypothetical protein; Sterol-binding domain-containing protein complement(4781484..4782089) Escherichia coli KO11FL 11779120 YP_005280142.1 CDS EKO11_4524 NC_016902.1 4782103 4782858 R KEGG: sdy:SDY_3910 ubiquinone/menaquinone biosynthesis methyltransferase; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; ubiquinone/menaquinone biosynthesis methyltransferase complement(4782103..4782858) Escherichia coli KO11FL 11779121 YP_005280143.1 CDS EKO11_4525 NC_016902.1 4782953 4784380 R PFAM: protein of unknown function DUF195; KEGG: sbo:SBO_3846 DNA recombination protein RmuC; hypothetical protein complement(4782953..4784380) Escherichia coli KO11FL 11779122 YP_005280144.1 CDS EKO11_4526 NC_016902.1 4784521 4785282 R KEGG: ebd:ECBD_4198 uridine phosphorylase; TIGRFAM: uridine phosphorylase; PFAM: purine or other phosphorylase family 1; uridine phosphorylase complement(4784521..4785282) Escherichia coli KO11FL 11779123 YP_005280145.1 CDS EKO11_4527 NC_016902.1 4785544 4786359 D KEGG: sfl:SF3908 putative enzyme; Carboxymethylenebutenolidase 4785544..4786359 Escherichia coli KO11FL 11779124 YP_005280146.1 CDS EKO11_4528 NC_016902.1 4786398 4788659 R TIGRFAM: 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase; KEGG: eoh:ECO103_4334 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; PFAM: Methionine synthase vitamin-B12 independent; Cobalamin-independent synthase MetE domain protein; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase complement(4786398..4788659) Escherichia coli KO11FL 11779125 YP_005280147.1 CDS EKO11_4529 NC_016902.1 4788782 4789735 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ssn:SSON_4002 regulator for MetE and MetH; LysR family transcriptional regulator 4788782..4789735 Escherichia coli KO11FL 11779126 YP_005280148.1 CDS EKO11_4530 NC_016902.1 4789623 4790522 R KEGG: ssn:SSON_4001 hypothetical protein; TIGRFAM: carboxylate/amino acid/amine transporter; PFAM: protein of unknown function DUF6 transmembrane; carboxylate/amino acid/amine transporter complement(4789623..4790522) Escherichia coli KO11FL 11779127 YP_005280149.1 CDS EKO11_4531 NC_016902.1 4790598 4791398 R KEGG: sbc:SbBS512_E4293 putative sugar phosphatase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; cof family hydrolase complement(4790598..4791398) Escherichia coli KO11FL 11779128 YP_005280150.1 CDS EKO11_4532 NC_016902.1 4791406 4792428 R KEGG: sbc:SbBS512_E4292 lysophospholipase L2; PFAM: alpha/beta hydrolase fold; lysophospholipase complement(4791406..4792428) Escherichia coli KO11FL 11779812 YP_005280151.1 CDS EKO11_4533 NC_016902.1 4792539 4793159 D KEGG: sbc:SbBS512_E4291 homoserine/homoserine lactone efflux protein; TIGRFAM: homoserine/threonine efflux pump; PFAM: Lysine exporter protein (LYSE/YGGA); homoserine/threonine efflux pump 4792539..4793159 Escherichia coli KO11FL 11779129 YP_005280152.1 CDS EKO11_4534 NC_016902.1 4793221 4793841 R KEGG: eok:G2583_4623 threonine efflux protein; TIGRFAM: homoserine/threonine efflux pump; PFAM: Lysine exporter protein (LYSE/YGGA); homoserine/threonine efflux pump complement(4793221..4793841) Escherichia coli KO11FL 11779130 YP_005280153.1 CDS EKO11_4535 NC_016902.1 4793905 4795740 R TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: RQC domain; DEAD/DEAH box helicase domain protein; helicase domain protein; HRDC domain protein; KEGG: eok:G2583_4622 ATP-dependent DNA helicase RecQ; SMART: HRDC domain protein; DEAD-like helicase ; helicase domain protein; ATP-dependent DNA helicase RecQ complement(4793905..4795740) Escherichia coli KO11FL 11779131 YP_005280154.1 CDS EKO11_4536 NC_016902.1 4795867 4796736 R KEGG: sdy:SDY_3922 phospholipase A; PFAM: phospholipase A1; phospholipase A(1) complement(4795867..4796736) Escherichia coli KO11FL 11779813 YP_005280155.1 CDS EKO11_4537 NC_016902.1 4796901 4797368 D PFAM: thioesterase superfamily protein; KEGG: sbc:SbBS512_E4287 hypothetical protein; thioesterase superfamily protein 4796901..4797368 Escherichia coli KO11FL 11779132 YP_005280156.1 CDS EKO11_4538 NC_016902.1 4797420 4798307 D KEGG: ssn:SSON_3993 hypothetical protein; TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; RarD protein, DMT superfamily transporter 4797420..4798307 Escherichia coli KO11FL 11779133 YP_005280157.1 CDS EKO11_4539 NC_016902.1 4798354 4798653 R KEGG: eok:G2583_4618 hypothetical protein; hypothetical protein complement(4798354..4798653) Escherichia coli KO11FL 11779134 YP_005280158.1 CDS EKO11_4540 NC_016902.1 4799275 4799478 R KEGG: eok:G2583_4616 hypothetical protein; manually curated; PFAM: Mg2 transporter protein CorA family protein; Mg2 transporter protein CorA family protein complement(4799275..4799478) Escherichia coli KO11FL 11779814 YP_005280159.1 CDS EKO11_4541 NC_016902.1 4799608 4800456 D KEGG: eoj:ECO26_4769 hypothetical protein; hypothetical protein 4799608..4800456 Escherichia coli KO11FL 11779135 YP_005280160.1 CDS EKO11_4542 NC_016902.1 4800453 4800932 D PFAM: protein of unknown function DUF943; KEGG: eoh:ECO103_4348 hypothetical protein; hypothetical protein 4800453..4800932 Escherichia coli KO11FL 11779136 YP_005280161.1 CDS EKO11_4543 NC_016902.1 4800986 4801936 R KEGG: sdy:SDY_3929 magnesium/nickel/cobalt transporter CorA; TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; magnesium and cobalt transport protein CorA complement(4800986..4801936) Escherichia coli KO11FL 11779137 YP_005280162.1 CDS EKO11_4544 NC_016902.1 4802306 4803070 D KEGG: eok:G2583_4612 hypothetical protein; hypothetical protein 4802306..4803070 Escherichia coli KO11FL 11779138 YP_005280163.1 CDS EKO11_4545 NC_016902.1 4803217 4805379 R KEGG: eoh:ECO103_4351 DNA-dependent helicase II; TIGRFAM: DNA helicase II; PFAM: UvrD/REP helicase; DNA helicase II complement(4803217..4805379) Escherichia coli KO11FL 11779139 YP_005280164.1 CDS EKO11_4546 NC_016902.1 4805463 4806179 R KEGG: sbc:SbBS512_E4272 flavin mononucleotide phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase complement(4805463..4806179) Escherichia coli KO11FL 11779140 YP_005280165.1 CDS EKO11_4547 NC_016902.1 4806179 4807075 R KEGG: sbc:SbBS512_E4271 site-specific tyrosine recombinase XerC; TIGRFAM: tyrosine recombinase XerC; PFAM: integrase family protein; integrase domain protein SAM domain protein; tyrosine recombinase XerC complement(4806179..4807075) Escherichia coli KO11FL 11779141 YP_005280166.1 CDS EKO11_4548 NC_016902.1 4807072 4807779 R PFAM: protein of unknown function DUF484; KEGG: sbc:SbBS512_E4270 hypothetical protein; hypothetical protein complement(4807072..4807779) Escherichia coli KO11FL 11779142 YP_005280167.1 CDS EKO11_4549 NC_016902.1 4807776 4808600 R KEGG: sdy:SDY_3936 diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: diaminopimelate epimerase; diaminopimelate epimerase complement(4807776..4808600) Escherichia coli KO11FL 11779143 YP_005280168.1 CDS EKO11_4550 NC_016902.1 4808637 4808840 R KEGG: ssn:SSON_3981 hypothetical protein; hypothetical protein complement(4808637..4808840) Escherichia coli KO11FL 11779815 YP_005280169.1 CDS EKO11_4552 NC_016902.1 4809303 4809623 D KEGG: sdy:SDY_3938 frataxin-like protein; TIGRFAM: iron donor protein CyaY; PFAM: Frataxin family protein; iron donor protein CyaY 4809303..4809623 Escherichia coli KO11FL 11779145 YP_005280170.1 CDS EKO11_4553 NC_016902.1 4809663 4812209 R KEGG: sbc:SbBS512_E4265 adenylate cyclase; PFAM: adenylate cyclase class-I; adenylate cyclase complement(4809663..4812209) Escherichia coli KO11FL 11779816 YP_005280171.1 CDS EKO11_4554 NC_016902.1 4812596 4813537 D KEGG: eoh:ECO103_4362 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase; porphobilinogen deaminase 4812596..4813537 Escherichia coli KO11FL 11779146 YP_005280172.1 CDS EKO11_4555 NC_016902.1 4813534 4814274 D PFAM: Uroporphyrinogen III synthase HEM4; KEGG: eoh:ECO103_4363 uroporphyrinogen-III synthase; uroporphyrinogen III synthase HEM4 4813534..4814274 Escherichia coli KO11FL 11779147 YP_005280173.1 CDS EKO11_4556 NC_016902.1 4814296 4815495 D KEGG: eoi:ECO111_4626 putative uroporphyrinogen III C-methyltransferase; PFAM: protein of unknown function DUF513 hemX; Uroporphyrinogen-III C-methyltransferase 4814296..4815495 Escherichia coli KO11FL 11779148 YP_005280174.1 CDS EKO11_4557 NC_016902.1 4815498 4816694 D KEGG: sbc:SbBS512_E4261 putative protoheme IX biogenesis protein; TIGRFAM: HemY protein; PFAM: HemY domain protein; HemY protein 4815498..4816694 Escherichia coli KO11FL 11779149 YP_005280175.1 CDS EKO11_4559 NC_016902.1 4817618 4818853 R PFAM: Radical SAM domain protein; KEGG: sbo:SBO_3812 putative arylsulfatase regulator; radical SAM protein complement(4817618..4818853) Escherichia coli KO11FL 11779151 YP_005280176.1 CDS EKO11_4560 NC_016902.1 4819539 4820924 R PFAM: amino acid permease-associated region; KEGG: sdy:SDY_3952 putative transport protein YifK; amino acid permease complement(4819539..4820924) Escherichia coli KO11FL 11779155 YP_005280177.1 CDS EKO11_4561 NC_016902.1 4821115 4821855 R TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; KEGG: sdy:SDY_3953 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; PFAM: glycosyl transferase WecB/TagA/CpsF; WecB/TagA/CpsF family glycosyl transferase complement(4821115..4821855) Escherichia coli KO11FL 11779156 YP_005280178.1 CDS EKO11_4562 NC_016902.1 4821858 4823210 R PFAM: WzyE family protein; KEGG: sfv:SFV_3710 putative common antigen polymerase; WzyE family protein complement(4821858..4823210) Escherichia coli KO11FL 11779157 YP_005280179.1 CDS EKO11_4563 NC_016902.1 4823207 4824286 R PFAM: 4-alpha-L-fucosyltransferase; KEGG: eoh:ECO103_4371 4-alpha-L-fucosyltransferase; 4-alpha-L-fucosyltransferase complement(4823207..4824286) Escherichia coli KO11FL 11779158 YP_005280180.1 CDS EKO11_4564 NC_016902.1 4824283 4825533 R PFAM: polysaccharide biosynthesis protein; KEGG: ebd:ECBD_4247 polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(4824283..4825533) Escherichia coli KO11FL 11779159 YP_005280181.1 CDS EKO11_4565 NC_016902.1 4825535 4826665 R KEGG: ssn:SSON_3963 TDP-4-oxo-6-deoxy-D-glucose transaminase; TIGRFAM: TDP-4-keto-6-deoxy-D-glucose transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; TDP-4-keto-6-deoxy-D-glucose transaminase complement(4825535..4826665) Escherichia coli KO11FL 11779161 YP_005280182.1 CDS EKO11_4566 NC_016902.1 4826670 4827344 R KEGG: eoh:ECO103_4374 TDP-fucosamine acetyltransferase; TIGRFAM: TDP-D-fucosamine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; TDP-D-fucosamine acetyltransferase complement(4826670..4827344) Escherichia coli KO11FL 11779163 YP_005280183.1 CDS EKO11_4567 NC_016902.1 4827322 4828203 R KEGG: sbc:SbBS512_E4132 glucose-1-phosphate thymidylyltransferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; glucose-1-phosphate thymidylyltransferase complement(4827322..4828203) Escherichia coli KO11FL 11779164 YP_005280184.1 CDS EKO11_4568 NC_016902.1 4828222 4829289 R KEGG: ebw:BWG_3470 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-glucose 4,6-dehydratase complement(4828222..4829289) Escherichia coli KO11FL 11779166 YP_005280185.1 CDS EKO11_4569 NC_016902.1 4829289 4830551 R TIGRFAM: nucleotide sugar dehydrogenase; KEGG: sfv:SFV_3717 UDP-N-acetyl-D-mannosamine dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase; nucleotide sugar dehydrogenase complement(4829289..4830551) Escherichia coli KO11FL 11779167 YP_005280186.1 CDS EKO11_4570 NC_016902.1 4830548 4831678 R TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: ebd:ECBD_4253 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; UDP-N-acetylglucosamine 2-epimerase complement(4830548..4831678) Escherichia coli KO11FL 11779168 YP_005280187.1 CDS EKO11_4571 NC_016902.1 4831734 4832780 R PFAM: lipopolysaccharide biosynthesis protein; KEGG: eoh:ECO103_4379 lipopolysaccharide biosynthesis protein WzzE; lipopolysaccharide biosynthesis protein complement(4831734..4832780) Escherichia coli KO11FL 11779169 YP_005280188.1 CDS EKO11_4572 NC_016902.1 4832792 4833895 R KEGG: sdy:SDY_3964 UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase; TIGRFAM: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; PFAM: Glycosyl transferase, family 4, conserved region; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase complement(4832792..4833895) Escherichia coli KO11FL 11779819 YP_005280189.1 CDS EKO11_4573 NC_016902.1 4833907 4834125 R KEGG: sbo:SBO_3794 hypothetical protein; hypothetical protein complement(4833907..4834125) Escherichia coli KO11FL 11779170 YP_005280190.1 CDS EKO11_4574 NC_016902.1 4834135 4835394 R TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor RNA-binding; Rho termination factor domain protein; KEGG: sdy:SDY_3966 transcription termination factor Rho; SMART: Cold shock protein; AAA ATPase; transcription termination factor Rho complement(4834135..4835394) Escherichia coli KO11FL 11779171 YP_005280191.1 CDS EKO11_4575 NC_016902.1 4835479 4835580 R manually curated; KEGG: sdy:SDY_3967 putative rho operon leader peptide; putative rho operon leader peptide complement(4835479..4835580) Escherichia coli KO11FL 11779172 YP_005280192.1 CDS EKO11_4576 NC_016902.1 4835721 4836050 R KEGG: cko:CKO_00123 hypothetical protein; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain-containing protein; thioredoxin complement(4835721..4836050) Escherichia coli KO11FL 11779173 YP_005280193.1 CDS EKO11_4577 NC_016902.1 4836181 4837446 D KEGG: ssn:SSON_3951 ATP-dependent RNA helicase RhlB; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; DEAD/DEAH box helicase 4836181..4837446 Escherichia coli KO11FL 11779174 YP_005280194.1 CDS EKO11_4578 NC_016902.1 4837580 4839064 D KEGG: sbc:SbBS512_E4142 guanosine pentaphosphate phosphohydrolase; PFAM: Ppx/GppA phosphatase; Ppx/GppA phosphatase 4837580..4839064 Escherichia coli KO11FL 11779175 YP_005280195.1 CDS EKO11_4579 NC_016902.1 4839111 4841132 R KEGG: ssn:SSON_3949 ATP-dependent DNA helicase Rep; TIGRFAM: ATP-dependent DNA helicase Rep; PFAM: UvrD/REP helicase; ATP-dependent DNA helicase Rep complement(4839111..4841132) Escherichia coli KO11FL 11779176 YP_005280196.1 CDS EKO11_4580 NC_016902.1 4841349 4841798 D KEGG: eoi:ECO111_4602 hypothetical protein; hypothetical protein 4841349..4841798 Escherichia coli KO11FL 11779177 YP_005280197.1 CDS EKO11_4581 NC_016902.1 4841997 4842278 D PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: cro:ROD_39731 peptidyl-prolyl cis-trans isomerase C; PpiC-type peptidyl-prolyl cis-trans isomerase 4841997..4842278 Escherichia coli KO11FL 11779178 YP_005280198.1 CDS EKO11_4582 NC_016902.1 4842365 4843840 R TIGRFAM: ketol-acid reductoisomerase; KEGG: sfv:SFV_3729 ketol-acid reductoisomerase; PFAM: acetohydroxy acid isomeroreductase; Acetohydroxy acid isomeroreductase catalytic domain-containing protein; ketol-acid reductoisomerase complement(4842365..4843840) Escherichia coli KO11FL 11779179 YP_005280199.1 CDS EKO11_4583 NC_016902.1 4843990 4844883 D PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eoj:ECO26_4813 DNA-binding transcriptional regulator IlvY; LysR family transcriptional regulator 4843990..4844883 Escherichia coli KO11FL 11779180 YP_005280200.1 CDS EKO11_4584 NC_016902.1 4844935 4846479 R KEGG: ssn:SSON_3943 threonine dehydratase; TIGRFAM: threonine dehydratase, biosynthetic; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; Threonine dehydratase domain-containing protein; threonine dehydratase, biosynthetic complement(4844935..4846479) Escherichia coli KO11FL 11779181 YP_005280201.1 CDS EKO11_4585 NC_016902.1 4846482 4848332 R TIGRFAM: dihydroxy-acid dehydratase; KEGG: sfv:SFV_3731 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; dihydroxy-acid dehydratase complement(4846482..4848332) Escherichia coli KO11FL 11779182 YP_005280202.1 CDS EKO11_4586 NC_016902.1 4848397 4849326 R KEGG: sdy:SDY_3978 branched-chain amino acid aminotransferase; TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; branched-chain amino acid aminotransferase complement(4848397..4849326) Escherichia coli KO11FL 11779183 YP_005280203.1 CDS EKO11_4587 NC_016902.1 4849346 4849609 R KEGG: sdy:SDY_3979 acetolactate synthase 2 regulatory subunit; Acetolactate synthase complement(4849346..4849609) Escherichia coli KO11FL 11779184 YP_005280204.1 CDS EKO11_4588 NC_016902.1 4849606 4851252 R KEGG: eoh:ECO103_4396 acetolactate synthase 2 catalytic subunit; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; acetolactate synthase large subunit complement(4849606..4851252) Escherichia coli KO11FL 11779185 YP_005280205.1 CDS EKO11_4589 NC_016902.1 4851842 4853362 D TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; KEGG: eoh:ECO103_4398 putative ATP-dependent protease; SMART: AAA ATPase; Mg chelatase subunit ChlI 4851842..4853362 Escherichia coli KO11FL 11779186 YP_005280206.1 CDS EKO11_4590 NC_016902.1 4853387 4853725 R PFAM: protein of unknown function DUF413; KEGG: sdy:SDY_3984 hypothetical protein; hypothetical protein complement(4853387..4853725) Escherichia coli KO11FL 11779820 YP_005280207.1 CDS EKO11_4591 NC_016902.1 4853844 4854683 D PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sdy:SDY_3985 transcriptional regulator HdfR; LysR family transcriptional regulator 4853844..4854683 Escherichia coli KO11FL 11779821 YP_005280208.1 CDS EKO11_4592 NC_016902.1 4860483 4861175 D KEGG: eoh:ECO103_4401 putative transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; GntR family transcriptional regulator 4860483..4861175 Escherichia coli KO11FL 11779192 YP_005280209.1 CDS EKO11_4593 NC_016902.1 4861198 4862625 D KEGG: eoi:ECO111_4588 putative multidrug or homocysteine efflux system protein HsrA; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; EmrB/QacA subfamily drug resistance transporter 4861198..4862625 Escherichia coli KO11FL 11779193 YP_005280210.1 CDS EKO11_4595 NC_016902.1 4863189 4863524 R PFAM: inner-membrane translocator; KEGG: sdy:SDY_3997 ribose ABC transporter permease protein; inner-membrane translocator complement(4863189..4863524) Escherichia coli KO11FL 11779196 YP_005280211.1 CDS EKO11_4596 NC_016902.1 4863529 4865034 R KEGG: ebd:ECBD_4281 D-ribose transporter ATP binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; ABC transporter complement(4863529..4865034) Escherichia coli KO11FL 11779198 YP_005280212.1 CDS EKO11_4597 NC_016902.1 4865042 4865461 R PFAM: RbsD or FucU transport; KEGG: sbc:SbBS512_E4172 D-ribose pyranase; transport protein RbsD/FucU complement(4865042..4865461) Escherichia coli KO11FL 11779200 YP_005280213.1 CDS EKO11_4598 NC_016902.1 4865628 4867496 R KEGG: ebd:ECBD_4285 potassium transport protein Kup; TIGRFAM: potassium uptake protein; PFAM: K potassium transporter; potassium uptake protein complement(4865628..4867496) Escherichia coli KO11FL 11779202 YP_005280214.1 CDS EKO11_4599 NC_016902.1 4867719 4869215 D KEGG: eoi:ECO111_4580 regulatory ATPase RavA; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; ATPase 4867719..4869215 Escherichia coli KO11FL 11779204 YP_005280215.1 CDS EKO11_4600 NC_016902.1 4869209 4870660 D SMART: von Willebrand factor type A; KEGG: sbo:SBO_3742 hypothetical protein; von Willebrand factor type A 4869209..4870660 Escherichia coli KO11FL 11779205 YP_005280216.1 CDS EKO11_4601 NC_016902.1 4870665 4871657 R TIGRFAM: aspartate/ammonia ligase; KEGG: sdy:SDY_4004 asparagine synthetase AsnA; PFAM: aspartate--ammonia ligase; aspartate/ammonia ligase complement(4870665..4871657) Escherichia coli KO11FL 11779206 YP_005280217.1 CDS EKO11_4602 NC_016902.1 4871809 4872267 D KEGG: sdy:SDY_4005 DNA-binding transcriptional regulator AsnC; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type; AsnC family transcriptional regulator 4871809..4872267 Escherichia coli KO11FL 11779207 YP_005280218.1 CDS EKO11_4603 NC_016902.1 4872357 4872800 D PFAM: flavodoxin/nitric oxide synthase; KEGG: sbc:SbBS512_E4179 flavodoxin; flavodoxin/nitric oxide synthase 4872357..4872800 Escherichia coli KO11FL 11779208 YP_005280219.1 CDS EKO11_4604 NC_016902.1 4873179 4875068 D KEGG: sbo:SBO_3746 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; TIGRFAM: glucose inhibited division protein A; PFAM: glucose-inhibited division protein A; glucose inhibited division protein A 4873179..4875068 Escherichia coli KO11FL 11779209 YP_005280220.1 CDS EKO11_4605 NC_016902.1 4875132 4875755 D KEGG: sbc:SbBS512_E4181 16S rRNA methyltransferase GidB; TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; methyltransferase GidB 4875132..4875755 Escherichia coli KO11FL 11779210 YP_005280221.1 CDS EKO11_4606 NC_016902.1 4876372 4876752 D PFAM: ATP synthase I chain; KEGG: sdy:SDY_4009 F0F1 ATP synthase subunit I; ATP synthase I chain 4876372..4876752 Escherichia coli KO11FL 11779211 YP_005280222.1 CDS EKO11_4607 NC_016902.1 4876761 4877576 D KEGG: sbc:SbBS512_E4183 F0F1 ATP synthase subunit A; TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit; ATP synthase F0 subunit A 4876761..4877576 Escherichia coli KO11FL 11779212 YP_005280223.1 CDS EKO11_4608 NC_016902.1 4877623 4877862 D KEGG: cro:ROD_40031 ATP synthase subunit C; TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit; ATP synthase F0 subunit C 4877623..4877862 Escherichia coli KO11FL 11779213 YP_005280224.1 CDS EKO11_4609 NC_016902.1 4877924 4878394 D KEGG: sdy:SDY_4012 F0F1 ATP synthase subunit B; TIGRFAM: ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit; ATP synthase F0 subunit B 4877924..4878394 Escherichia coli KO11FL 11779214 YP_005280225.1 CDS EKO11_4610 NC_016902.1 4878409 4878942 D KEGG: sbc:SbBS512_E4186 F0F1 ATP synthase subunit delta; TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; ATP synthase F1 subunit delta 4878409..4878942 Escherichia coli KO11FL 11779215 YP_005280226.1 CDS EKO11_4611 NC_016902.1 4878955 4880496 D KEGG: sdy:SDY_4014 F0F1 ATP synthase subunit alpha; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; ATP synthase F1 subunit alpha 4878955..4880496 Escherichia coli KO11FL 11779216 YP_005280227.1 CDS EKO11_4612 NC_016902.1 4880547 4881410 D KEGG: sdy:SDY_4015 F0F1 ATP synthase subunit gamma; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit; ATP synthase F1 subunit gamma 4880547..4881410 Escherichia coli KO11FL 11779217 YP_005280228.1 CDS EKO11_4613 NC_016902.1 4881437 4882819 D TIGRFAM: ATP synthase F1, beta subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: sbc:SbBS512_E4189 F0F1 ATP synthase subunit beta; SMART: AAA ATPase; ATP synthase F1 subunit beta 4881437..4882819 Escherichia coli KO11FL 11779218 YP_005280229.1 CDS EKO11_4614 NC_016902.1 4882840 4883259 D KEGG: sdy:SDY_4017 F0F1 ATP synthase subunit epsilon; TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit-like; ATP synthase F1 subunit epsilon 4882840..4883259 Escherichia coli KO11FL 11779219 YP_005280230.1 CDS EKO11_4615 NC_016902.1 4883610 4884980 D TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; KEGG: ebd:ECBD_4302 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein; UDP-N-acetylglucosamine pyrophosphorylase 4883610..4884980 Escherichia coli KO11FL 11779220 YP_005280231.1 CDS EKO11_4616 NC_016902.1 4885142 4886971 D KEGG: ebd:ECBD_4303 glucosamine--fructose-6-phosphate aminotransferase; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); glucosamine/fructose-6-phosphate aminotransferase 4885142..4886971 Escherichia coli KO11FL 11779221 YP_005280232.1 CDS EKO11_4617 NC_016902.1 4887273 4887845 D PFAM: Fimbrial protein domain-containing protein; KEGG: sbc:SbBS512_E4193 long polar fimbrial operon protein LpfA; fimbrial protein domain-containing protein 4887273..4887845 Escherichia coli KO11FL 11779222 YP_005280233.1 CDS EKO11_4618 NC_016902.1 4887893 4888624 D PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: eoi:ECO111_4560 putative fimbrial chaperone protein precursor; Pili assembly chaperone, N-terminal protein 4887893..4888624 Escherichia coli KO11FL 11779223 YP_005280234.1 CDS EKO11_4619 NC_016902.1 4888649 4891171 D PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: eoi:ECO111_4559 putative outer membrane usher protein precursor; fimbrial biogenesis outer membrane usher protein 4888649..4891171 Escherichia coli KO11FL 11779224 YP_005280235.1 CDS EKO11_4620 NC_016902.1 4891182 4892255 D PFAM: Fimbrial protein domain-containing protein; KEGG: sbc:SbBS512_E4199 long polar fimbrial operon protein LpfD; fimbrial protein domain-containing protein 4891182..4892255 Escherichia coli KO11FL 11779225 YP_005280236.1 CDS EKO11_4621 NC_016902.1 4892503 4893543 D KEGG: sbc:SbBS512_E4200 phosphate ABC transporter periplasmic substrate-binding protein PstS; TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; phosphate ABC transporter substrate-binding protein 4892503..4893543 Escherichia coli KO11FL 11779226 YP_005280237.1 CDS EKO11_4622 NC_016902.1 4893630 4894589 D KEGG: sbc:SbBS512_E4201 phosphate transporter permease subunit PstC; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease 4893630..4894589 Escherichia coli KO11FL 11779227 YP_005280238.1 CDS EKO11_4623 NC_016902.1 4894589 4895479 D KEGG: sfx:S4043 phosphate transporter permease subunit PtsA; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; phosphate ABC transporter permease 4894589..4895479 Escherichia coli KO11FL 11779228 YP_005280239.1 CDS EKO11_4624 NC_016902.1 4895570 4896343 D TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: sdy:SDY_4025 phosphate transporter subunit; SMART: AAA ATPase; phosphate ABC transporter ATPase 4895570..4896343 Escherichia coli KO11FL 11779229 YP_005280240.1 CDS EKO11_4625 NC_016902.1 4896358 4897083 D KEGG: sbc:SbBS512_E4204 transcriptional regulator PhoU; TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; phosphate uptake regulator PhoU 4896358..4897083 Escherichia coli KO11FL 11779230 YP_005280241.1 CDS EKO11_4626 NC_016902.1 4897369 4898205 D PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: eoi:ECO111_4551 transcriptional antiterminator BglG; transcriptional antiterminator BglG 4897369..4898205 Escherichia coli KO11FL 11779231 YP_005280242.1 CDS EKO11_4627 NC_016902.1 4898264 4900216 D manually curated; TIGRFAM: PTS system, beta-glucoside-specific IIABC subunit; PTS system, glucose-like IIB subunint; PTS system, maltose and glucose-specific subfamily, IIC subunit; PTS system, glucose subfamily, IIA subunit; KEGG: efe:EFER_4020 PTS system beta-glucoside-specific transporter subunits IIABC; PFAM: sugar-specific permease EIIA 1 domain; phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; PTS system beta-glucoside-specific transporter subunit IIABC 4898264..4900216 Escherichia coli KO11FL 11779823 YP_005280243.1 CDS EKO11_4628 NC_016902.1 4900235 4901629 D PFAM: glycoside hydrolase family 1; KEGG: eoi:ECO111_4548 cryptic phospho-beta-glucosidase B; glycoside hydrolase 4900235..4901629 Escherichia coli KO11FL 11779232 YP_005280244.1 CDS EKO11_4629 NC_016902.1 4901715 4903331 D PFAM: porin LamB type; KEGG: eoi:ECO111_4547 carbohydrate-specific outer membrane porin, cryptic; LamB type porin 4901715..4903331 Escherichia coli KO11FL 11779233 YP_005280245.1 CDS EKO11_4630 NC_016902.1 4903358 4904527 D PFAM: glycoside hydrolase family 13 domain protein; esterase; KEGG: eoh:ECO103_4439 putative xylanase; glycoside hydrolase family protein 4903358..4904527 Escherichia coli KO11FL 11779234 YP_005280246.1 CDS EKO11_4631 NC_016902.1 4904542 4905264 D PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: ebd:ECBD_4314 putative 6-phosphogluconolactonase; glucosamine/galactosamine-6-phosphate isomerase 4904542..4905264 Escherichia coli KO11FL 11779235 YP_005280247.1 CDS EKO11_4632 NC_016902.1 4905326 4905913 R PFAM: protein of unknown function UPF0167; KEGG: ebd:ECBD_4315 protein of unknown function UPF0167; hypothetical protein complement(4905326..4905913) Escherichia coli KO11FL 11779236 YP_005280248.1 CDS EKO11_4633 NC_016902.1 4905962 4906435 R KEGG: eoh:ECO103_4442 putative inner membrane protein; putative inner membrane protein complement(4905962..4906435) Escherichia coli KO11FL 11779237 YP_005280249.1 CDS EKO11_4634 NC_016902.1 4906502 4907167 R KEGG: ebd:ECBD_4317 6-phosphogluconate phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase complement(4906502..4907167) Escherichia coli KO11FL 11779238 YP_005280250.1 CDS EKO11_4635 NC_016902.1 4907334 4908671 D PFAM: Xanthine/uracil/vitamin C permease; KEGG: ebd:ECBD_4318 xanthine/uracil/vitamin C permease; xanthine/uracil/vitamin C permease 4907334..4908671 Escherichia coli KO11FL 11779239 YP_005280251.1 CDS EKO11_4636 NC_016902.1 4908725 4909291 R PFAM: NADPH-dependent FMN reductase; KEGG: sfv:SFV_3798 hypothetical protein; NADPH-dependent FMN reductase complement(4908725..4909291) Escherichia coli KO11FL 11779240 YP_005280252.1 CDS EKO11_4637 NC_016902.1 4909313 4910062 R KEGG: eoh:ECO103_4446 putative phosphopantetheinyl transferase; putative phosphopantetheinyl transferase complement(4909313..4910062) Escherichia coli KO11FL 11779241 YP_005280253.1 CDS EKO11_4638 NC_016902.1 4910219 4911178 R PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbc:SbBS512_E4211 DNA-binding transcriptional regulator YidZ; LysR family transcriptional regulator complement(4910219..4911178) Escherichia coli KO11FL 11779242 YP_005280254.1 CDS EKO11_4639 NC_016902.1 4911153 4912328 R PFAM: major facilitator superfamily MFS_1; KEGG: eoh:ECO103_4448 multidrug efflux system protein MdtL; major facilitator superfamily protein complement(4911153..4912328) Escherichia coli KO11FL 11779824 YP_005280255.1 CDS EKO11_4640 NC_016902.1 4912460 4913707 R KEGG: sbo:SBO_3666 tryptophan permease TnaB; TIGRFAM: aromatic amino acid transporter; PFAM: Tryptophan/tyrosine permease; aromatic amino acid transporter complement(4912460..4913707) Escherichia coli KO11FL 11779243 YP_005280256.1 CDS EKO11_4641 NC_016902.1 4913798 4915213 R TIGRFAM: tryptophanase; KEGG: sfv:SFV_3805 tryptophanase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; tryptophanase complement(4913798..4915213) Escherichia coli KO11FL 11779825 YP_005280257.1 CDS EKO11_4642 NC_016902.1 4915434 4915532 R manually curated; TIGRFAM: tryptophanase leader peptide; KEGG: efe:EFER_4509 tryptophanase leader peptide; PFAM: tryptophanese operon leader peptide; tryptophanase leader peptide complement(4915434..4915532) Escherichia coli KO11FL 11779826 YP_005280258.1 CDS EKO11_4643 NC_016902.1 4915751 4917115 R KEGG: ebd:ECBD_4326 tRNA modification GTPase TrmE; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related; tRNA modification GTPase TrmE complement(4915751..4917115) Escherichia coli KO11FL 11779244 YP_005280259.1 CDS EKO11_4644 NC_016902.1 4917221 4918867 R KEGG: ssn:SSON_3656 putative inner membrane protein translocase component YidC; TIGRFAM: membrane protein insertase, YidC/Oxa1 family domain containing; membrane protein insertase, YidC/Oxa1 family; PFAM: 60 kDa inner membrane insertion protein; YidC/Oxa1 family membrane protein insertase complement(4917221..4918867) Escherichia coli KO11FL 11779245 YP_005280260.1 CDS EKO11_4645 NC_016902.1 4918870 4919127 R KEGG: sdy:SDY_4187 hypothetical protein; manually curated; PFAM: protein of unknown function DUF37; hypothetical protein complement(4918870..4919127) Escherichia coli KO11FL 11779246 YP_005280261.1 CDS EKO11_4646 NC_016902.1 4919091 4919450 R manually curated; TIGRFAM: ribonuclease P protein component; KEGG: sdy:SDY_4186 ribonuclease P; PFAM: ribonuclease P protein; ribonuclease P protein component complement(4919091..4919450) Escherichia coli KO11FL 11779247 YP_005280262.1 CDS EKO11_4647 NC_016902.1 4919467 4919607 R KEGG: pam:PANA_0091 RpmH; TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34; 50S ribosomal protein L34 complement(4919467..4919607) Escherichia coli KO11FL 11779248 YP_005280263.1 CDS EKO11_4770 NC_016903.1 41 364 D PFAM: mobilisation protein; KEGG: eoj:ECO26_p3-3 putative mobilization protein 2; mobilization protein 41..364 Escherichia coli KO11FL 11743927 YP_005280264.1 CDS EKO11_4771 NC_016903.1 354 1907 D PFAM: Relaxase/mobilization nuclease family protein; KEGG: eoj:ECO26_p3-4 mobilization protein MbeA; Relaxase/mobilization nuclease family protein 354..1907 Escherichia coli KO11FL 11743921 YP_005280265.1 CDS EKO11_4773 NC_016903.1 2165 3145 R KEGG: pcr:Pcryo_2488 hypothetical protein; hypothetical protein complement(2165..3145) Escherichia coli KO11FL 11743926 YP_005280266.1 CDS EKO11_4774 NC_016903.1 3147 4154 R KEGG: pcr:Pcryo_2487 hypothetical protein; hypothetical protein complement(3147..4154) Escherichia coli KO11FL 11743923 YP_005280267.1 CDS EKO11_4775 NC_016903.1 4482 4922 R KEGG: nve:NEMVE_v1g137021 hypothetical protein; hypothetical protein complement(4482..4922) Escherichia coli KO11FL 11743924 YP_005280268.1 CDS EKO11_4776 NC_016903.1 5144 5335 R PFAM: regulatory protein Rop; KEGG: rcu:RCOM_2091210 Regulatory protein rop, putative; regulatory protein Rop complement(5144..5335) Escherichia coli KO11FL 11743925 YP_005280269.1 CDS EKO11_4648 NC_016904.1 104 433 D KEGG: eoh:ECO103_3781 hypothetical protein; hypothetical protein 104..433 Escherichia coli KO11FL 11779941 YP_005280270.1 CDS EKO11_4649 NC_016904.1 420 800 D PFAM: IS66 Orf2 family protein; KEGG: eoj:ECO26_1299 hypothetical protein; IS66 Orf2 family protein 420..800 Escherichia coli KO11FL 11779942 YP_005280271.1 CDS EKO11_4650 NC_016904.1 843 2426 D KEGG: eoh:ECO103_3783 hypothetical protein; hypothetical protein 843..2426 Escherichia coli KO11FL 11779943 YP_005280272.1 CDS EKO11_4651 NC_016904.1 2955 3956 D KEGG: seh:SeHA_A0025 hypothetical protein; hypothetical protein 2955..3956 Escherichia coli KO11FL 11779944 YP_005280273.1 CDS EKO11_4652 NC_016904.1 4130 4474 R KEGG: pap:PSPA7_5067 putative tail tape measure protein; hypothetical protein complement(4130..4474) Escherichia coli KO11FL 11779945 YP_005280274.1 CDS EKO11_4653 NC_016904.1 4972 5226 R KEGG: seh:SeHA_A0026 hypothetical protein; hypothetical protein complement(4972..5226) Escherichia coli KO11FL 11779946 YP_005280275.1 CDS EKO11_4654 NC_016904.1 5276 6202 R KEGG: seh:SeHA_A0027 hypothetical protein; hypothetical protein complement(5276..6202) Escherichia coli KO11FL 11779947 YP_005280276.1 CDS EKO11_4655 NC_016904.1 6735 7085 D KEGG: efe:pEFER_0055 conserved hypothetical protein, putative helix-turn-helix, fis-type; hypothetical protein 6735..7085 Escherichia coli KO11FL 11779948 YP_005280277.1 CDS EKO11_4656 NC_016904.1 7144 7965 D KEGG: kpu:pK2044_00670 hypothetical protein; hypothetical protein 7144..7965 Escherichia coli KO11FL 11779949 YP_005280278.1 CDS EKO11_4657 NC_016904.1 7965 8744 D PFAM: integrase family protein; KEGG: seh:SeHA_A0031 resolvase; integrase family protein 7965..8744 Escherichia coli KO11FL 11779828 YP_005280279.1 CDS EKO11_4658 NC_016904.1 8925 9569 D KEGG: seh:SeHA_A0032 ParA protein homolog; ParA protein 8925..9569 Escherichia coli KO11FL 11779829 YP_005280280.1 CDS EKO11_4659 NC_016904.1 9656 9964 D KEGG: seh:SeHA_A0033 putative 60 kDa chaperonin; putative 60 kDa chaperonin 9656..9964 Escherichia coli KO11FL 11779830 YP_005280281.1 CDS EKO11_4660 NC_016904.1 10378 11358 D PFAM: StbA family protein; KEGG: seh:SeHA_A0034 plasmid segregation protein ParM; StbA family protein 10378..11358 Escherichia coli KO11FL 11779831 YP_005280282.1 CDS EKO11_4661 NC_016904.1 11351 11767 D PFAM: Plasmid stability protein, StbB; KEGG: seh:SeHA_A0035 plasmid stability protein; plasmid stability protein StbB 11351..11767 Escherichia coli KO11FL 11779832 YP_005280283.1 CDS EKO11_4662 NC_016904.1 11769 13043 R KEGG: seh:SeHA_A0036 DNA polymerase V subunit UmuC; PFAM: UMUC domain protein DNA-repair protein; DNA-directed DNA polymerase complement(11769..13043) Escherichia coli KO11FL 11779833 YP_005280284.1 CDS EKO11_4663 NC_016904.1 13043 13480 R PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: seh:SeHA_A0037 protein ImpA; Peptidase S24/S26A/S26B complement(13043..13480) Escherichia coli KO11FL 11779834 YP_005280285.1 CDS EKO11_4664 NC_016904.1 13477 13725 R PFAM: DinI family protein; KEGG: seh:SeHA_A0038 protein ImpC; DinI family protein complement(13477..13725) Escherichia coli KO11FL 11779835 YP_005280286.1 CDS EKO11_4665 NC_016904.1 13836 14105 D manually curated; KEGG: mpa:MAP1687 hypothetical protein; hypothetical protein 13836..14105 Escherichia coli KO11FL 11779836 YP_005280287.1 CDS EKO11_4666 NC_016904.1 14119 15045 D PFAM: protein of unknown function DUF1281; KEGG: sfl:CP0196 hypothetical protein; hypothetical protein 14119..15045 Escherichia coli KO11FL 11779837 YP_005280288.1 CDS EKO11_4667 NC_016904.1 15197 15322 R manually curated; KEGG: sec:SC131 hypothetical protein; hypothetical protein complement(15197..15322) Escherichia coli KO11FL 11779838 YP_005280289.1 CDS EKO11_4668 NC_016904.1 15429 16112 D PFAM: DNA methylase N-4/N-6 domain protein; KEGG: sfl:CP0198 putative methylase; DNA methylase N-4/N-6 domain-containing protein 15429..16112 Escherichia coli KO11FL 11779839 YP_005280290.1 CDS EKO11_4669 NC_016904.1 16113 16334 D KEGG: eok:G2583_pO550161 hypothetical protein; hypothetical protein 16113..16334 Escherichia coli KO11FL 11779840 YP_005280291.1 CDS EKO11_4670 NC_016904.1 16348 16782 D KEGG: eoj:ECO26_p1-57 conserved predicted protein; hypothetical protein 16348..16782 Escherichia coli KO11FL 11779841 YP_005280292.1 CDS EKO11_4671 NC_016904.1 16828 17604 D KEGG: etw:ECSP_6047 hypothetical protein; hypothetical protein 16828..17604 Escherichia coli KO11FL 11779842 YP_005280293.1 CDS EKO11_4673 NC_016904.1 18015 18440 D PFAM: Antirestriction protein; KEGG: eoj:ECO26_p2-16 putative antirestriction protein; antirestriction protein 18015..18440 Escherichia coli KO11FL 11779844 YP_005280294.1 CDS EKO11_4674 NC_016904.1 18487 18909 D KEGG: eok:G2583_pO550002 YcjA; YcjA 18487..18909 Escherichia coli KO11FL 11779845 YP_005280295.1 CDS EKO11_4675 NC_016904.1 18906 19097 D KEGG: sec:SC124 hypothetical protein; hypothetical protein 18906..19097 Escherichia coli KO11FL 11779846 YP_005280296.1 CDS EKO11_4676 NC_016904.1 19866 20393 D KEGG: sec:SC120 single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; single-strand binding protein 19866..20393 Escherichia coli KO11FL 11779847 YP_005280297.1 CDS EKO11_4677 NC_016904.1 20450 20683 D PFAM: protein of unknown function DUF905; KEGG: sec:SC119 YkfF; hypothetical protein 20450..20683 Escherichia coli KO11FL 11779848 YP_005280298.1 CDS EKO11_4678 NC_016904.1 20745 22703 D TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: seh:SeHA_A0053 ParB-like partition protein; SMART: ParB domain protein nuclease; parB-like partition protein 20745..22703 Escherichia coli KO11FL 11779849 YP_005280299.1 CDS EKO11_4679 NC_016904.1 22758 23192 D PFAM: plasmid SOS inhibition protein; KEGG: seh:SeHA_A0054 plasmid SOS inhibition protein B; plasmid SOS inhibition protein 22758..23192 Escherichia coli KO11FL 11779850 YP_005280300.1 CDS EKO11_4680 NC_016904.1 23189 23908 D PFAM: PsiA family protein; KEGG: seh:SeHA_A0055 plasmid SOS inhibition protein A; PsiA family protein 23189..23908 Escherichia coli KO11FL 11779851 YP_005280301.1 CDS EKO11_4681 NC_016904.1 23905 24501 D KEGG: seh:SeHA_A0056 hypothetical protein; hypothetical protein 23905..24501 Escherichia coli KO11FL 11779852 YP_005280302.1 CDS EKO11_4682 NC_016904.1 24573 25043 D KEGG: sec:SC114 anti-restriction protein; manually curated; PFAM: protein of unknown function DUF1472; hypothetical protein 24573..25043 Escherichia coli KO11FL 11779853 YP_005280303.1 CDS EKO11_4683 NC_016904.1 24964 25464 D PFAM: Antirestriction ArdA family protein; KEGG: sec:SC114 anti-restriction protein; Antirestriction ArdA family protein 24964..25464 Escherichia coli KO11FL 11779854 YP_005280304.1 CDS EKO11_4684 NC_016904.1 26192 27043 R KEGG: ebd:ECBD_4284 integrase catalytic region; manually curated; PFAM: Integrase catalytic region; integrase catalytic subunit complement(26192..27043) Escherichia coli KO11FL 11779855 YP_005280305.1 CDS EKO11_4685 NC_016904.1 27040 27561 R KEGG: sfx:S1483 IS103 orf; transposase complement(27040..27561) Escherichia coli KO11FL 11779856 YP_005280306.1 CDS EKO11_4686 NC_016904.1 27639 28073 D KEGG: sec:SC111 YdfA; hypothetical protein 27639..28073 Escherichia coli KO11FL 11779857 YP_005280307.1 CDS EKO11_4687 NC_016904.1 28167 28433 D KEGG: seh:SeHA_A0064 hypothetical protein; hypothetical protein 28167..28433 Escherichia coli KO11FL 11779858 YP_005280308.1 CDS EKO11_4688 NC_016904.1 28498 29388 D PFAM: transposase YhgA family protein; KEGG: sec:SC108 putative YhgA-like transposase; transposase YhgA family protein 28498..29388 Escherichia coli KO11FL 11779859 YP_005280309.1 CDS EKO11_4689 NC_016904.1 29388 29609 D KEGG: eoj:ECO26_p1-67 hypothetical protein; hypothetical protein 29388..29609 Escherichia coli KO11FL 11779860 YP_005280310.1 CDS EKO11_4690 NC_016904.1 29640 29891 R KEGG: seh:SeHA_A0067 hypothetical protein; hypothetical protein complement(29640..29891) Escherichia coli KO11FL 11779861 YP_005280311.1 CDS EKO11_4691 NC_016904.1 30473 31321 D KEGG: sec:SC102 YdiA; protein YdiA 30473..31321 Escherichia coli KO11FL 11779862 YP_005280312.1 CDS EKO11_4692 NC_016904.1 31407 31742 R KEGG: eoj:ECO26_p1-71 probable mobilization protein MobC; putative mobilization protein MobC complement(31407..31742) Escherichia coli KO11FL 11779863 YP_005280313.1 CDS EKO11_4693 NC_016904.1 31928 32308 D manually curated; KEGG: seh:SeHA_A0073 relaxosome component; relaxosome component 31928..32308 Escherichia coli KO11FL 11779864 YP_005280314.1 CDS EKO11_4694 NC_016904.1 32319 35018 D PFAM: Relaxase/mobilization nuclease family protein; KEGG: seh:SeHA_A0074 putative relaxase/mobilization nuclease domain protein; Relaxase/mobilization nuclease family protein 32319..35018 Escherichia coli KO11FL 11779865 YP_005280315.1 CDS EKO11_4695 NC_016904.1 35055 37346 R KEGG: seh:SeHA_A0075 TrbC; conjugal transfer protein, TrbC complement(35055..37346) Escherichia coli KO11FL 11779866 YP_005280316.1 CDS EKO11_4696 NC_016904.1 37339 38409 R KEGG: seh:SeHA_A0076 TrbB; conjugal transfer protein, TrbB complement(37339..38409) Escherichia coli KO11FL 11779867 YP_005280317.1 CDS EKO11_4697 NC_016904.1 38428 39636 R KEGG: seh:SeHA_A0077 conjugal transfer protein; conjugal transfer protein complement(38428..39636) Escherichia coli KO11FL 11779868 YP_005280318.1 CDS EKO11_4698 NC_016904.1 39898 40806 R KEGG: pfh:PFHG_03201 conserved hypothetical protein; hypothetical protein complement(39898..40806) Escherichia coli KO11FL 11779869 YP_005280319.1 CDS EKO11_4699 NC_016904.1 41438 41533 D KEGG: sec:SC083 hypothetical protein; hypothetical protein 41438..41533 Escherichia coli KO11FL 11779870 YP_005280320.1 CDS EKO11_4700 NC_016904.1 41598 41774 R KEGG: seh:SeHA_A0080 hypothetical protein; hypothetical protein complement(41598..41774) Escherichia coli KO11FL 11779871 YP_005280321.1 CDS EKO11_4701 NC_016904.1 41984 42175 R KEGG: sgl:SG0681 hemolysin expression-modulating protein; manually curated; PFAM: Haemolysin expression modulating family protein; hemolysin expression modulating family protein complement(41984..42175) Escherichia coli KO11FL 11779872 YP_005280322.1 CDS EKO11_4702 NC_016904.1 42241 42855 R KEGG: seh:SeHA_A0083 surface exclusion protein; hypothetical protein complement(42241..42855) Escherichia coli KO11FL 11779873 YP_005280323.1 CDS EKO11_4703 NC_016904.1 42931 45168 R manually curated; KEGG: sec:SC079 integral membrane protein; conjugal transfer integral membrane protein TraY complement(42931..45168) Escherichia coli KO11FL 11779874 YP_005280324.1 CDS EKO11_4704 NC_016904.1 45196 45780 R KEGG: seh:SeHA_A0085 TraX; conjugal transfer protein TraX complement(45196..45780) Escherichia coli KO11FL 11779875 YP_005280325.1 CDS EKO11_4705 NC_016904.1 45809 47011 R KEGG: sec:SC077 lipoprotein; conjugal transfer protein TraW complement(45809..47011) Escherichia coli KO11FL 11779876 YP_005280326.1 CDS EKO11_4706 NC_016904.1 46978 47592 R KEGG: seh:SeHA_A0087 TraV; conjugal transfer protein TraV complement(46978..47592) Escherichia coli KO11FL 11779877 YP_005280327.1 CDS EKO11_4707 NC_016904.1 47592 50636 R KEGG: seh:SeHA_A0088 TraU; protein TraU complement(47592..50636) Escherichia coli KO11FL 11779878 YP_005280328.1 CDS EKO11_4708 NC_016904.1 50726 51526 R KEGG: seh:SeHA_A0089 hypothetical protein; hypothetical protein complement(50726..51526) Escherichia coli KO11FL 11779879 YP_005280329.1 CDS EKO11_4709 NC_016904.1 51510 51698 R KEGG: seh:SeHA_A0090 hypothetical protein; hypothetical protein complement(51510..51698) Escherichia coli KO11FL 11779880 YP_005280330.1 CDS EKO11_4710 NC_016904.1 51762 52166 R KEGG: seh:SeHA_A0091 TraR; TraR complement(51762..52166) Escherichia coli KO11FL 11779881 YP_005280331.1 CDS EKO11_4711 NC_016904.1 52217 52744 R KEGG: seh:SeHA_A0092 TraQ; TraQ complement(52217..52744) Escherichia coli KO11FL 11779882 YP_005280332.1 CDS EKO11_4712 NC_016904.1 52744 53448 R KEGG: seh:SeHA_A0093 TraP; TraP complement(52744..53448) Escherichia coli KO11FL 11779883 YP_005280333.1 CDS EKO11_4713 NC_016904.1 53448 54737 R KEGG: sec:SC069 TraO-like protein; TraO-like protein complement(53448..54737) Escherichia coli KO11FL 11779884 YP_005280334.1 CDS EKO11_4714 NC_016904.1 54740 55723 R KEGG: seh:SeHA_A0095 TraN; protein TraN complement(54740..55723) Escherichia coli KO11FL 11779885 YP_005280335.1 CDS EKO11_4715 NC_016904.1 55734 56426 R KEGG: sec:SC071 TraM-like protein; TraM-like protein complement(55734..56426) Escherichia coli KO11FL 11779886 YP_005280336.1 CDS EKO11_4716 NC_016904.1 56423 56770 R KEGG: seh:SeHA_A0097 TraL; protein TraL complement(56423..56770) Escherichia coli KO11FL 11779887 YP_005280337.1 CDS EKO11_4717 NC_016904.1 56788 60555 R KEGG: seh:SeHA_A0098 DNA primase; PFAM: TOPRIM domain-containing protein; SMART: Toprim sub domain-containing protein; TOPRIM domain-containing protein complement(56788..60555) Escherichia coli KO11FL 11779888 YP_005280338.1 CDS EKO11_4718 NC_016904.1 60645 61196 R KEGG: seh:SeHA_A0099 phospholipase D (PLD) family protein; phospholipase D complement(60645..61196) Escherichia coli KO11FL 11779889 YP_005280339.1 CDS EKO11_4719 NC_016904.1 61211 61501 R KEGG: seh:SeHA_A0100 TraK; protein TraK complement(61211..61501) Escherichia coli KO11FL 11779890 YP_005280340.1 CDS EKO11_4722 NC_016904.1 63904 64722 R KEGG: seh:SeHA_A0102 lipoprotein; lipoprotein complement(63904..64722) Escherichia coli KO11FL 11779893 YP_005280341.1 CDS EKO11_4723 NC_016904.1 64719 65177 R KEGG: seh:SeHA_A0103 lipoprotein; lipoprotein complement(64719..65177) Escherichia coli KO11FL 11779894 YP_005280342.1 CDS EKO11_4724 NC_016904.1 65572 66156 R PFAM: Phosphoglycerate mutase; KEGG: seh:SeHA_A0105 TraG; phosphoglycerate mutase complement(65572..66156) Escherichia coli KO11FL 11779895 YP_005280343.1 CDS EKO11_4725 NC_016904.1 66216 67415 R KEGG: seh:SeHA_A0106 TraF; protein TraF complement(66216..67415) Escherichia coli KO11FL 11779896 YP_005280344.1 CDS EKO11_4726 NC_016904.1 67504 68328 R KEGG: seh:SeHA_A0107 TraE; protein TraE complement(67504..68328) Escherichia coli KO11FL 11779897 YP_005280345.1 CDS EKO11_4728 NC_016904.1 68718 70010 R KEGG: seh:SeHA_A0109 shufflon protein B'; shufflon protein B' complement(68718..70010) Escherichia coli KO11FL 11779899 YP_005280346.1 CDS EKO11_4729 NC_016904.1 70010 70666 R PFAM: peptidase A24A prepilin type IV; KEGG: seh:SeHA_A0110 prepilin peptidase; peptidase A24A prepilin type IV complement(70010..70666) Escherichia coli KO11FL 11779900 YP_005280347.1 CDS EKO11_4730 NC_016904.1 70651 71211 R PFAM: Lytic transglycosylase catalytic; KEGG: seh:SeHA_A0111 lytic transglycosylase PilT; lytic transglycosylase complement(70651..71211) Escherichia coli KO11FL 11779901 YP_005280348.1 CDS EKO11_4731 NC_016904.1 71221 71835 R PFAM: PilS domain-containing protein; KEGG: seh:SeHA_A0112 typeIV prepilin; PilS domain-containing protein complement(71221..71835) Escherichia coli KO11FL 11779902 YP_005280349.1 CDS EKO11_4732 NC_016904.1 71852 72937 R PFAM: Type II secretion system F domain; KEGG: seh:SeHA_A0113 integral membrane protein; type II secretion system F domain-containing protein complement(71852..72937) Escherichia coli KO11FL 11779903 YP_005280350.1 CDS EKO11_4733 NC_016904.1 72950 74503 R PFAM: type II secretion system protein E; KEGG: seh:SeHA_A0114 ATP-binding protein; type II secretion system protein E complement(72950..74503) Escherichia coli KO11FL 11779904 YP_005280351.1 CDS EKO11_4734 NC_016904.1 74514 74966 R TIGRFAM: type IV pilus biogenesis protein PilP; KEGG: seh:SeHA_A0115 type IV pilus biogenesis protein PilP; type IV pilus biogenesis protein PilP complement(74514..74966) Escherichia coli KO11FL 11779905 YP_005280352.1 CDS EKO11_4735 NC_016904.1 74953 76248 R KEGG: seh:SeHA_A0116 PilO protein; PilO protein complement(74953..76248) Escherichia coli KO11FL 11779906 YP_005280353.1 CDS EKO11_4736 NC_016904.1 76241 77923 R KEGG: seh:SeHA_A0117 type IVB pilus formation outer membrane protein, R64 PilN family; TIGRFAM: type IVB pilus formation outer membrane protein, R64 PilN family; PFAM: Secretin domain protein; type II and III secretion system protein; type IVB pilus formation outer membrane protein, R64 PilN family complement(76241..77923) Escherichia coli KO11FL 11779907 YP_005280354.1 CDS EKO11_4737 NC_016904.1 77937 78374 R KEGG: seh:SeHA_A0118 PilM protein; PilM protein complement(77937..78374) Escherichia coli KO11FL 11779908 YP_005280355.1 CDS EKO11_4738 NC_016904.1 78374 79441 R KEGG: seh:SeHA_A0119 PilL protein; PilL protein complement(78374..79441) Escherichia coli KO11FL 11779909 YP_005280356.1 CDS EKO11_4739 NC_016904.1 79770 80363 R KEGG: seh:SeHA_A0120 PilK protein; hypothetical protein complement(79770..80363) Escherichia coli KO11FL 11779910 YP_005280357.1 CDS EKO11_4740 NC_016904.1 80455 80709 R PFAM: Plasmid conjugative transfer protein PilI; KEGG: seh:SeHA_A0125 hypothetical protein; Plasmid conjugative transfer protein PilI complement(80455..80709) Escherichia coli KO11FL 11779911 YP_005280358.1 CDS EKO11_4741 NC_016904.1 80873 81556 R KEGG: seh:SeHA_A0127 hypothetical protein; hypothetical protein complement(80873..81556) Escherichia coli KO11FL 11779912 YP_005280359.1 CDS EKO11_4742 NC_016904.1 81810 82343 R KEGG: eoj:ECO26_p1-23 transfer protein B; PFAM: NGN domain-containing protein; SMART: NGN domain-containing protein; NGN domain-containing protein complement(81810..82343) Escherichia coli KO11FL 11779913 YP_005280360.1 CDS EKO11_4743 NC_016904.1 82785 83072 R KEGG: seh:SeHA_A0131 TraA; PFAM: Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; sigma-70 region 4 type 2 complement(82785..83072) Escherichia coli KO11FL 11779914 YP_005280361.1 CDS EKO11_4745 NC_016904.1 83955 85256 D KEGG: seh:SeHA_A0002 replication initiation protein; replication initiation protein 83955..85256 Escherichia coli KO11FL 11779916 YP_005280362.1 CDS EKO11_4747 NC_016904.1 86166 86444 D KEGG: sdy:SDY_P087 hypothetical protein; hypothetical protein 86166..86444 Escherichia coli KO11FL 11779918 YP_005280363.1 CDS EKO11_4748 NC_016904.1 86444 86719 D PFAM: plasmid stabilization system; KEGG: etw:ECSP_6086 hypothetical protein; plasmid stabilization system 86444..86719 Escherichia coli KO11FL 11779919 YP_005280364.1 CDS EKO11_4749 NC_016904.1 86825 87112 D KEGG: xca:xccb100_1412 putative transporter-like membrane protein; hypothetical protein 86825..87112 Escherichia coli KO11FL 11779920 YP_005280365.1 CDS EKO11_4750 NC_016904.1 87303 87569 R KEGG: seh:SeHA_A0011 hypothetical protein; hypothetical protein complement(87303..87569) Escherichia coli KO11FL 11779921 YP_005280366.1 CDS EKO11_4751 NC_016904.1 87569 88063 R KEGG: seh:SeHA_A0012 hypothetical protein; hypothetical protein complement(87569..88063) Escherichia coli KO11FL 11779922 YP_005280367.1 CDS EKO11_4752 NC_016904.1 88119 88721 R PFAM: Fertility inhibition FinO-like; KEGG: seh:SeHA_A0013 YafB; Fertility inhibition FinO-like protein complement(88119..88721) Escherichia coli KO11FL 11779923 YP_005280368.1 CDS EKO11_4753 NC_016904.1 89075 90421 D KEGG: seh:SeHA_A0015 YagA; YagA 89075..90421 Escherichia coli KO11FL 11779924 YP_005280369.1 CDS EKO11_4755 NC_016904.1 91574 92761 R PFAM: transposase; KEGG: sfx:S1497 IS91 orf; transposase complement(91574..92761) Escherichia coli KO11FL 11779926 YP_005280370.1 CDS EKO11_4756 NC_016904.1 92761 93126 R KEGG: eoj:ECO26_p1-83 hypothetical protein; hypothetical protein complement(92761..93126) Escherichia coli KO11FL 11779927 YP_005280371.1 CDS EKO11_4758 NC_016904.1 93824 94135 D PFAM: P pili regulatory PapB protein; KEGG: sec:SCV23 major pilu subunit operon regulatory protein PapB; P pili regulatory PapB protein 93824..94135 Escherichia coli KO11FL 11779929 YP_005280372.1 CDS EKO11_4759 NC_016904.1 94177 94719 D KEGG: sew:SeSA_A4578 K88 fimbrial protein A; K88 fimbrial protein A 94177..94719 Escherichia coli KO11FL 11779930 YP_005280373.1 CDS EKO11_4760 NC_016904.1 94734 97178 D PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: sew:SeSA_A4579 CshB porin; fimbrial biogenesis outer membrane usher protein 94734..97178 Escherichia coli KO11FL 11779931 YP_005280374.1 CDS EKO11_4761 NC_016904.1 97171 97947 D PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: sew:SeSA_A4580 chaperone protein ClpE; Pili assembly chaperone, N-terminal protein 97171..97947 Escherichia coli KO11FL 11779932 YP_005280375.1 CDS EKO11_4762 NC_016904.1 97982 98473 D KEGG: sew:SeSA_A4581 K88 minor fimbrial protein FaeF; K88 minor fimbrial protein FaeF 97982..98473 Escherichia coli KO11FL 11779933 YP_005280376.1 CDS EKO11_4763 NC_016904.1 98710 99567 D PFAM: Fimbrial major/minor subunit; KEGG: eta:ETA_01640 K88 fimbrial protein AC precursor; Fimbrial major/minor subunit 98710..99567 Escherichia coli KO11FL 11779934 YP_005280377.1 CDS EKO11_4764 NC_016904.1 99663 100133 D KEGG: kpe:KPK_A0163 hypothetical protein; hypothetical protein 99663..100133 Escherichia coli KO11FL 11779935 YP_005280378.1 CDS EKO11_4765 NC_016904.1 100130 100258 D hypothetical protein 100130..100258 Escherichia coli KO11FL 11779936 YP_005280379.1 CDS EKO11_4766 NC_016904.1 100355 101947 D KEGG: pmr:PMI3491 plasmid-related protein; plasmid-like protein 100355..101947 Escherichia coli KO11FL 11779937 YP_005280380.1 CDS EKO11_4767 NC_016904.1 101982 103106 D KEGG: enc:ECL_A049 hypothetical protein; hypothetical protein 101982..103106 Escherichia coli KO11FL 11779938 YP_005280381.1 CDS EKO11_4768 NC_016904.1 103106 103396 D KEGG: kpu:pK2044_01240 hypothetical protein; hypothetical protein 103106..103396 Escherichia coli KO11FL 11779939 YP_005280382.1 CDS EKO11_4769 NC_016904.1 103386 103583 R KEGG: enc:ECL_A054 hypothetical protein; hypothetical protein complement(103386..103583) Escherichia coli KO11FL 11779940 EKO11_R0001 tRNA EKO11_R0001 NC_016902.1 63205 63295 R tRNA-Sec complement(63205..63295) Escherichia coli KO11FL 11779256 EKO11_R0002 tRNA EKO11_R0002 NC_016902.1 200581 200657 D tRNA-Pro 200581..200657 Escherichia coli KO11FL 11775226 EKO11_R0004 tRNA EKO11_R0004 NC_016902.1 465951 466027 D tRNA-Ile 465951..466027 Escherichia coli KO11FL 11775461 EKO11_R0005 tRNA EKO11_R0005 NC_016902.1 466070 466145 D tRNA-Ala 466070..466145 Escherichia coli KO11FL 11775462 EKO11_R0008 tRNA EKO11_R0008 NC_016902.1 469457 469532 D tRNA-Thr 469457..469532 Escherichia coli KO11FL 11775465 EKO11_R0010 tRNA EKO11_R0010 NC_016902.1 563783 563869 D tRNA-Leu 563783..563869 Escherichia coli KO11FL 11775548 EKO11_R0011 tRNA EKO11_R0011 NC_016902.1 567652 567728 D tRNA-Met 567652..567728 Escherichia coli KO11FL 11775550 EKO11_R0013 tRNA EKO11_R0013 NC_016902.1 677690 677765 R tRNA-Met complement(677690..677765) Escherichia coli KO11FL 11775640 EKO11_R0014 tRNA EKO11_R0014 NC_016902.1 794483 794558 R tRNA-Phe complement(794483..794558) Escherichia coli KO11FL 11775738 EKO11_R0016 tRNA EKO11_R0016 NC_016902.1 909970 910043 D tRNA-Gly 909970..910043 Escherichia coli KO11FL 11775832 EKO11_R0017 tRNA EKO11_R0017 NC_016902.1 1005318 1005394 R tRNA-Met complement(1005318..1005394) Escherichia coli KO11FL 11775909 EKO11_R0018 tRNA EKO11_R0018 NC_016902.1 1138931 1139023 D tRNA-Ser 1138931..1139023 Escherichia coli KO11FL 11776017 EKO11_R0019 tRNA EKO11_R0019 NC_016902.1 1139027 1139103 D tRNA-Arg 1139027..1139103 Escherichia coli KO11FL 11776018 EKO11_R0020 tRNA EKO11_R0020 NC_016902.1 1139301 1139377 D tRNA-Arg 1139301..1139377 Escherichia coli KO11FL 11776019 EKO11_R0021 tRNA EKO11_R0021 NC_016902.1 1139441 1139517 D tRNA-Arg 1139441..1139517 Escherichia coli KO11FL 11776020 EKO11_R0022 tRNA EKO11_R0022 NC_016902.1 1139716 1139792 D tRNA-Arg 1139716..1139792 Escherichia coli KO11FL 11776021 EKO11_R0025 tRNA EKO11_R0025 NC_016902.1 1205482 1205557 D tRNA-Glu 1205482..1205557 Escherichia coli KO11FL 11776082 EKO11_R0028 tRNA EKO11_R0028 NC_016902.1 1401420 1401495 R tRNA-Lys complement(1401420..1401495) Escherichia coli KO11FL 11776239 EKO11_R0029 tRNA EKO11_R0029 NC_016902.1 1401500 1401575 R tRNA-Val complement(1401500..1401575) Escherichia coli KO11FL 11776240 EKO11_R0030 tRNA EKO11_R0030 NC_016902.1 1401622 1401697 R tRNA-Val complement(1401622..1401697) Escherichia coli KO11FL 11776241 EKO11_R0031 tRNA EKO11_R0031 NC_016902.1 1401742 1401817 R tRNA-Val complement(1401742..1401817) Escherichia coli KO11FL 11776242 EKO11_R0032 tRNA EKO11_R0032 NC_016902.1 1404517 1404592 D tRNA-Ala 1404517..1404592 Escherichia coli KO11FL 11779418 EKO11_R0033 tRNA EKO11_R0033 NC_016902.1 1404632 1404707 D tRNA-Ala 1404632..1404707 Escherichia coli KO11FL 11776246 EKO11_R0034 tRNA EKO11_R0034 NC_016902.1 1487727 1487801 R tRNA-Arg complement(1487727..1487801) Escherichia coli KO11FL 11776328 EKO11_R0035 tRNA EKO11_R0035 NC_016902.1 1650181 1650257 R tRNA-Pro complement(1650181..1650257) Escherichia coli KO11FL 11776460 EKO11_R0036 tRNA EKO11_R0036 NC_016902.1 1892104 1892179 R tRNA-Asn complement(1892104..1892179) Escherichia coli KO11FL 11776664 EKO11_R0037 tRNA EKO11_R0037 NC_016902.1 1894513 1894588 R tRNA-Asn complement(1894513..1894588) Escherichia coli KO11FL 11776666 EKO11_R0038 tRNA EKO11_R0038 NC_016902.1 1896337 1896412 D tRNA-Asn 1896337..1896412 Escherichia coli KO11FL 11776668 EKO11_R0039 tRNA EKO11_R0039 NC_016902.1 1909820 1909895 R tRNA-Asn complement(1909820..1909895) Escherichia coli KO11FL 11776673 EKO11_R0040 tRNA EKO11_R0040 NC_016902.1 1910887 1910976 D tRNA-Ser 1910887..1910976 Escherichia coli KO11FL 11776675 EKO11_R0041 tRNA EKO11_R0041 NC_016902.1 1965099 1965174 D tRNA-Gly 1965099..1965174 Escherichia coli KO11FL 11776731 EKO11_R0042 tRNA EKO11_R0042 NC_016902.1 1965228 1965301 D tRNA-Cys 1965228..1965301 Escherichia coli KO11FL 11776732 EKO11_R0043 tRNA EKO11_R0043 NC_016902.1 1965314 1965400 D tRNA-Leu 1965314..1965400 Escherichia coli KO11FL 11776733 EKO11_R0044 tRNA EKO11_R0044 NC_016902.1 2212903 2212979 R tRNA-Val complement(2212903..2212979) Escherichia coli KO11FL 11776949 EKO11_R0045 tRNA EKO11_R0045 NC_016902.1 2212984 2213060 R tRNA-Val complement(2212984..2213060) Escherichia coli KO11FL 11776950 EKO11_R0046 tRNA EKO11_R0046 NC_016902.1 2587479 2587553 R tRNA-Gly complement(2587479..2587553) Escherichia coli KO11FL 11777270 EKO11_R0047 tRNA EKO11_R0047 NC_016902.1 2587557 2587632 R tRNA-Thr complement(2587557..2587632) Escherichia coli KO11FL 11777271 EKO11_R0048 tRNA EKO11_R0048 NC_016902.1 2725798 2725882 D tRNA-Tyr 2725798..2725882 Escherichia coli KO11FL 11777400 EKO11_R0049 tRNA EKO11_R0049 NC_016902.1 2725917 2726001 D tRNA-Tyr 2725917..2726001 Escherichia coli KO11FL 11777401 EKO11_R0050 tRNA EKO11_R0050 NC_016902.1 2900250 2900337 D tRNA-Ser 2900250..2900337 Escherichia coli KO11FL 11777561 EKO11_R0051 tRNA EKO11_R0051 NC_016902.1 2965588 2965675 D tRNA-Ser 2965588..2965675 Escherichia coli KO11FL 11777613 EKO11_R0052 tRNA EKO11_R0052 NC_016902.1 3080277 3080364 D tRNA-Ser 3080277..3080364 Escherichia coli KO11FL 11777697 EKO11_R0053 tRNA EKO11_R0053 NC_016902.1 3262251 3262326 R tRNA-Lys complement(3262251..3262326) Escherichia coli KO11FL 11777855 EKO11_R0054 tRNA EKO11_R0054 NC_016902.1 3262360 3262435 R tRNA-Lys complement(3262360..3262435) Escherichia coli KO11FL 11777856 EKO11_R0055 tRNA EKO11_R0055 NC_016902.1 3262582 3262657 R tRNA-Lys complement(3262582..3262657) Escherichia coli KO11FL 11777857 EKO11_R0056 tRNA EKO11_R0056 NC_016902.1 3262661 3262736 R tRNA-Val complement(3262661..3262736) Escherichia coli KO11FL 11777858 EKO11_R0057 tRNA EKO11_R0057 NC_016902.1 3262886 3262961 R tRNA-Lys complement(3262886..3262961) Escherichia coli KO11FL 11777859 EKO11_R0058 tRNA EKO11_R0058 NC_016902.1 3262964 3263039 R tRNA-Val complement(3262964..3263039) Escherichia coli KO11FL 11777860 EKO11_R0059 tRNA EKO11_R0059 NC_016902.1 3263175 3263250 R tRNA-Lys complement(3263175..3263250) Escherichia coli KO11FL 11777861 EKO11_R0060 tRNA EKO11_R0060 NC_016902.1 3343152 3343228 D tRNA-Met 3343152..3343228 Escherichia coli KO11FL 11777920 EKO11_R0061 tRNA EKO11_R0061 NC_016902.1 3343237 3343321 D tRNA-Leu 3343237..3343321 Escherichia coli KO11FL 11777921 EKO11_R0062 tRNA EKO11_R0062 NC_016902.1 3343345 3343419 D tRNA-Gln 3343345..3343419 Escherichia coli KO11FL 11777922 EKO11_R0063 tRNA EKO11_R0063 NC_016902.1 3343454 3343528 D tRNA-Gln 3343454..3343528 Escherichia coli KO11FL 11777923 EKO11_R0064 tRNA EKO11_R0064 NC_016902.1 3343544 3343620 D tRNA-Met 3343544..3343620 Escherichia coli KO11FL 11777924 EKO11_R0065 tRNA EKO11_R0065 NC_016902.1 3343669 3343743 D tRNA-Gln 3343669..3343743 Escherichia coli KO11FL 11779650 EKO11_R0066 tRNA EKO11_R0066 NC_016902.1 3343781 3343855 D tRNA-Gln 3343781..3343855 Escherichia coli KO11FL 11777925 EKO11_R0067 tRNA EKO11_R0067 NC_016902.1 3469192 3469268 R tRNA-Arg complement(3469192..3469268) Escherichia coli KO11FL 11778019 EKO11_R0069 tRNA EKO11_R0069 NC_016902.1 3686686 3686766 R tRNA-OTHER complement(3686686..3686766) Escherichia coli KO11FL 11778197 EKO11_R0070 tRNA EKO11_R0070 NC_016902.1 3746623 3746698 R tRNA-Thr complement(3746623..3746698) Escherichia coli KO11FL 11778242 EKO11_R0071 tRNA EKO11_R0071 NC_016902.1 3874204 3874280 R tRNA-Asp complement(3874204..3874280) Escherichia coli KO11FL 11778369 EKO11_R0072 tRNA EKO11_R0072 NC_016902.1 3882428 3882504 R tRNA-Asp complement(3882428..3882504) Escherichia coli KO11FL 11778378 EKO11_R0075 tRNA EKO11_R0075 NC_016902.1 3885856 3885931 R tRNA-Ala complement(3885856..3885931) Escherichia coli KO11FL 11778381 EKO11_R0076 tRNA EKO11_R0076 NC_016902.1 3885974 3886050 R tRNA-Ile complement(3885974..3886050) Escherichia coli KO11FL 11778382 EKO11_R0078 tRNA EKO11_R0078 NC_016902.1 4145723 4145809 D tRNA-Leu 4145723..4145809 Escherichia coli KO11FL 11778588 EKO11_R0079 tRNA EKO11_R0079 NC_016902.1 4145838 4145924 D tRNA-Leu 4145838..4145924 Escherichia coli KO11FL 11778589 EKO11_R0080 tRNA EKO11_R0080 NC_016902.1 4145959 4146045 D tRNA-Leu 4145959..4146045 Escherichia coli KO11FL 11779741 EKO11_R0081 tRNA EKO11_R0081 NC_016902.1 4258396 4258480 R tRNA-Leu complement(4258396..4258480) Escherichia coli KO11FL 11779754 EKO11_R0082 tRNA EKO11_R0082 NC_016902.1 4362982 4363057 R tRNA-Gly complement(4362982..4363057) Escherichia coli KO11FL 11778769 EKO11_R0083 tRNA EKO11_R0083 NC_016902.1 4363093 4363168 R tRNA-Gly complement(4363093..4363168) Escherichia coli KO11FL 11778770 EKO11_R0084 tRNA EKO11_R0084 NC_016902.1 4363205 4363280 R tRNA-Gly complement(4363205..4363280) Escherichia coli KO11FL 11778771 EKO11_R0085 tRNA EKO11_R0085 NC_016902.1 4397972 4398047 D tRNA-Phe 4397972..4398047 Escherichia coli KO11FL 11778805 EKO11_R0088 tRNA EKO11_R0088 NC_016902.1 4552689 4552764 R tRNA-Glu complement(4552689..4552764) Escherichia coli KO11FL 11779785 EKO11_R0090 tRNA EKO11_R0090 NC_016902.1 4585768 4585843 R tRNA-Thr complement(4585768..4585843) Escherichia coli KO11FL 11778947 EKO11_R0091 tRNA EKO11_R0091 NC_016902.1 4585850 4585924 R tRNA-Gly complement(4585850..4585924) Escherichia coli KO11FL 11778948 EKO11_R0092 tRNA EKO11_R0092 NC_016902.1 4586041 4586125 R tRNA-Tyr complement(4586041..4586125) Escherichia coli KO11FL 11778949 EKO11_R0093 tRNA EKO11_R0093 NC_016902.1 4586134 4586209 R tRNA-Thr complement(4586134..4586209) Escherichia coli KO11FL 11778950 EKO11_R0096 tRNA EKO11_R0096 NC_016902.1 4593149 4593224 R tRNA-Glu complement(4593149..4593224) Escherichia coli KO11FL 11778956 EKO11_R0100 tRNA EKO11_R0100 NC_016902.1 4764569 4764644 R tRNA-Ala complement(4764569..4764644) Escherichia coli KO11FL 11779107 EKO11_R0101 tRNA EKO11_R0101 NC_016902.1 4764687 4764763 R tRNA-Ile complement(4764687..4764763) Escherichia coli KO11FL 11779108 EKO11_R0103 tRNA EKO11_R0103 NC_016902.1 4819000 4819076 R tRNA-Pro complement(4819000..4819076) Escherichia coli KO11FL 11779817 EKO11_R0104 tRNA EKO11_R0104 NC_016902.1 4819119 4819205 R tRNA-Leu complement(4819119..4819205) Escherichia coli KO11FL 11779152 EKO11_R0105 tRNA EKO11_R0105 NC_016902.1 4819226 4819301 R tRNA-His complement(4819226..4819301) Escherichia coli KO11FL 11779153 EKO11_R0106 tRNA EKO11_R0106 NC_016902.1 4819360 4819436 R tRNA-Arg complement(4819360..4819436) Escherichia coli KO11FL 11779154 EKO11_R0107 tRNA EKO11_R0107 NC_016902.1 4854779 4854854 R tRNA-Trp complement(4854779..4854854) Escherichia coli KO11FL 11779187 EKO11_R0108 tRNA EKO11_R0108 NC_016902.1 4854863 4854939 R tRNA-Asp complement(4854863..4854939) Escherichia coli KO11FL 11779822 EKO11_R0111 tRNA EKO11_R0111 NC_016902.1 4858300 4858375 R tRNA-Glu complement(4858300..4858375) Escherichia coli KO11FL 11779190 EKO11_R0003 rRNA EKO11_R0003 NC_016902.1 464348 465877 D 16S ribosomal RNA 464348..465877 Escherichia coli KO11FL 11775460 EKO11_R0006 rRNA EKO11_R0006 NC_016902.1 466331 469232 D 23S ribosomal RNA 466331..469232 Escherichia coli KO11FL 11775463 EKO11_R0007 rRNA EKO11_R0007 NC_016902.1 469327 469442 D 5S ribosomal RNA 469327..469442 Escherichia coli KO11FL 11775464 EKO11_R0009 rRNA EKO11_R0009 NC_016902.1 469572 469687 D 5S ribosomal RNA 469572..469687 Escherichia coli KO11FL 11775466 EKO11_R0024 rRNA EKO11_R0024 NC_016902.1 1203776 1205305 D 16S ribosomal RNA 1203776..1205305 Escherichia coli KO11FL 11776081 EKO11_R0026 rRNA EKO11_R0026 NC_016902.1 1205753 1208653 D 23S ribosomal RNA 1205753..1208653 Escherichia coli KO11FL 11776083 EKO11_R0027 rRNA EKO11_R0027 NC_016902.1 1208748 1208863 D 5S ribosomal RNA 1208748..1208863 Escherichia coli KO11FL 11776084 EKO11_R0073 rRNA EKO11_R0073 NC_016902.1 3882559 3882674 R 5S ribosomal RNA complement(3882559..3882674) Escherichia coli KO11FL 11778379 EKO11_R0074 rRNA EKO11_R0074 NC_016902.1 3882769 3885670 R 23S ribosomal RNA complement(3882769..3885670) Escherichia coli KO11FL 11778380 EKO11_R0077 rRNA EKO11_R0077 NC_016902.1 3886124 3887653 R 16S ribosomal RNA complement(3886124..3887653) Escherichia coli KO11FL 11778383 EKO11_R0086 rRNA EKO11_R0086 NC_016902.1 4549382 4549497 R 5S ribosomal RNA complement(4549382..4549497) Escherichia coli KO11FL 11778921 EKO11_R0087 rRNA EKO11_R0087 NC_016902.1 4549592 4552493 R 23S ribosomal RNA complement(4549592..4552493) Escherichia coli KO11FL 11778922 EKO11_R0089 rRNA EKO11_R0089 NC_016902.1 4552855 4554385 R 16S ribosomal RNA complement(4552855..4554385) Escherichia coli KO11FL 11779786 EKO11_R0094 rRNA EKO11_R0094 NC_016902.1 4589843 4589958 R 5S ribosomal RNA complement(4589843..4589958) Escherichia coli KO11FL 11778954 EKO11_R0095 rRNA EKO11_R0095 NC_016902.1 4590053 4592953 R 23S ribosomal RNA complement(4590053..4592953) Escherichia coli KO11FL 11778955 EKO11_R0097 rRNA EKO11_R0097 NC_016902.1 4593401 4594930 R 16S ribosomal RNA complement(4593401..4594930) Escherichia coli KO11FL 11779791 EKO11_R0098 rRNA EKO11_R0098 NC_016902.1 4761271 4761386 R 5S ribosomal RNA complement(4761271..4761386) Escherichia coli KO11FL 11779105 EKO11_R0099 rRNA EKO11_R0099 NC_016902.1 4761482 4764383 R 23S ribosomal RNA complement(4761482..4764383) Escherichia coli KO11FL 11779106 EKO11_R0102 rRNA EKO11_R0102 NC_016902.1 4764837 4766366 R 16S ribosomal RNA complement(4764837..4766366) Escherichia coli KO11FL 11779109 EKO11_R0109 rRNA EKO11_R0109 NC_016902.1 4854994 4855109 R 5S ribosomal RNA complement(4854994..4855109) Escherichia coli KO11FL 11779188 EKO11_R0110 rRNA EKO11_R0110 NC_016902.1 4855204 4858104 R 23S ribosomal RNA complement(4855204..4858104) Escherichia coli KO11FL 11779189 EKO11_R0112 rRNA EKO11_R0112 NC_016902.1 4858466 4859995 R 16S ribosomal RNA complement(4858466..4859995) Escherichia coli KO11FL 11779191