-- dump date 20140619_083032 -- class Genbank::CDS -- table cds_note -- id note YP_005275730.1 TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; KEGG: ssn:SSON_3652 chromosomal replication initiation protein; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase YP_005275731.1 SMART: DNA polymerase III beta chain; TIGRFAM: DNA polymerase III, beta subunit; KEGG: sdy:SDY_4183 DNA polymerase III subunit beta; PFAM: DNA polymerase III beta chain YP_005275732.1 KEGG: ssn:SSON_3650 recombination protein F; TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein YP_005275733.1 SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA gyrase, B subunit; KEGG: ssn:SSON_3649 DNA gyrase subunit B; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain-containing protein; DNA gyrase subunit B domain protein YP_005275734.1 PFAM: protein of unknown function DUF937; KEGG: ssn:SSON_3648 hypothetical protein YP_005275735.1 KEGG: ssn:SSON_3647 sugar phosphatase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_005275736.1 KEGG: sfl:SF3768 hypothetical protein YP_005275737.1 KEGG: sfx:S4002 regulator protein for dgo operon; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_005275738.1 KEGG: eoi:ECO111_4521 2-oxo-3-deoxygalactonate kinase; PFAM: 2-keto-3-deoxy-galactonokinase YP_005275739.1 PFAM: KDPG and KHG aldolase; KEGG: eoh:ECO103_4465 2-dehydro-3-deoxy-6-phosphogalactonate aldolase YP_005275740.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ebd:ECBD_0011 galactonate dehydratase YP_005275741.1 KEGG: ssn:SSON_3642 D-galactonate transport; TIGRFAM: d-galactonate transporter; phosphoglycerate transporter; PFAM: major facilitator superfamily MFS_1 YP_005275742.1 PFAM: monooxygenase FAD-binding; KEGG: ebd:ECBD_0013 putative oxidoreductase YP_005275743.1 KEGG: ebd:ECBD_0014 hypothetical protein YP_005275744.1 PFAM: protein of unknown function DUF1375; KEGG: sbc:SbBS512_E4231 hypothetical protein YP_005275745.1 PFAM: heat shock protein Hsp20; KEGG: sdy:SDY_4173 heat shock protein IbpA YP_005275746.1 PFAM: heat shock protein Hsp20; KEGG: sdy:SDY_4172 heat shock chaperone IbpB YP_005275747.1 KEGG: sfx:S3992 hypothetical protein; TIGRFAM: YidE/YbjL duplication; PFAM: YidE/YbjL duplication domain-containing protein; TrkA-C domain protein YP_005275748.1 KEGG: sdy:SDY_4170 putative transcriptional regulator; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_005275749.1 TIGRFAM: PTS system, alpha-glucoside-specific IIBC subunit; PTS system, maltose and glucose-specific subfamily, IIC subunit; PTS system, glucose-like IIB subunint; KEGG: eoh:ECO103_4475 PTS system arbutin-like IIC component; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site YP_005275750.1 KEGG: ebd:ECBD_0022 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_005275751.1 KEGG: eoi:ECO111_4504 putative symporter YidK; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter YP_005275752.1 PFAM: sulfatase; KEGG: eoh:ECO103_4479 putative sulfatase/phosphatase YP_005275753.1 KEGG: eoi:ECO111_4502 putative inner membrane protein YP_005275754.1 PFAM: protein of unknown function DUF202; KEGG: sdy:SDY_4160 hypothetical protein YP_005275755.1 KEGG: sbc:SbBS512_E4243 hypothetical protein YP_005275756.1 KEGG: sfv:SFV_3836 putative transcriptional regulator YP_005275757.1 KEGG: sfv:SFV_3837 multidrug resistance protein D; TIGRFAM: multidrug/H+ antiporter, major facilitator superfamily (MFS); PFAM: major facilitator superfamily MFS_1 YP_005275758.1 KEGG: sbc:SbBS512_E4246 hypothetical protein YP_005275759.1 manually curated; KEGG: ebd:ECBD_0031 hypothetical protein YP_005275760.1 KEGG: sbc:SbBS512_E4248 acetolactate synthase catalytic subunit; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein YP_005275761.1 KEGG: ssn:SSON_3624 acetolactate synthase 1 regulatory subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein YP_005275762.1 KEGG: sbc:SbBS512_E4250 DNA-binding transcriptional activator UhpA; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_005275763.1 KEGG: sbo:SBO_3701 sensory histidine kinase UhpB; PFAM: MASE1 domain protein; histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_005275764.1 KEGG: eoh:ECO103_4490 regulatory protein UhpC; TIGRFAM: phosphoglycerate transporter; PFAM: major facilitator superfamily MFS_1 YP_005275765.1 KEGG: sbo:SBO_3703 sugar phosphate antiporter; TIGRFAM: phosphoglycerate transporter; PFAM: major facilitator superfamily MFS_1 YP_005275766.1 TIGRFAM: adenine deaminase; KEGG: eoj:ECO26_4918 cryptic adenine deaminase; PFAM: amidohydrolase YP_005275767.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: sfx:S3971 hypothetical protein YP_005275768.1 PFAM: protein of unknown function DUF1198; KEGG: ebd:ECBD_0040 protein of unknown function DUF1198 YP_005275769.1 KEGG: ebr:ECB_03546 ribonucleoside transporter; manually curated; PFAM: major facilitator superfamily MFS_1 YP_005275770.1 KEGG: sbo:SBO_3710 putative transport protein YP_005275771.1 KEGG: eoh:ECO103_4497 cytoplasmic membrane lipoprotein-28; TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein YP_005275772.1 KEGG: ebd:ECBD_0045 carboxylate/amino acid/amine transporter; TIGRFAM: carboxylate/amino acid/amine transporter; PFAM: protein of unknown function DUF6 transmembrane YP_005275773.1 KEGG: ebd:ECBD_0046 sugar efflux transporter; TIGRFAM: sugar efflux transporter; PFAM: major facilitator superfamily MFS_1 YP_005275774.1 KEGG: ebd:ECBD_0047 hypothetical protein YP_005275776.1 PFAM: protein of unknown function DUF1219; KEGG: eay:EAM_3020 hypothetical protein YP_005275777.1 PFAM: YagBYeeUYfjZ family protein; KEGG: eoh:ECO103_5087 hypothetical protein YP_005275778.1 PFAM: protein of unknown function DUF987; KEGG: kpe:KPK_4943 hypothetical protein YP_005275779.1 KEGG: pay:PAU_03957 hypothetical protein; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC YP_005275780.1 KEGG: pay:PAU_03958 hypothetical protein YP_005275781.1 KEGG: ppr:PBPRA1948 hypothetical protein YP_005275782.1 KEGG: tva:TVAG_072150 megakaryocyte stimulating factor YP_005275783.1 PFAM: transposase IS3/IS911 family protein; KEGG: cro:ROD_49861 IS3 transposase A YP_005275784.1 PFAM: Integrase catalytic region; KEGG: cro:ROD_49871 IS3 transposase B YP_005275785.1 KEGG: vpo:Kpol_461p11 hypothetical protein YP_005275786.1 KEGG: cro:ROD_49761 hypothetical protein YP_005275787.1 PFAM: Prophage CP4-57 regulatory; KEGG: pmr:PMI3478 phage regulatory protein YP_005275788.1 KEGG: alv:Alvin_3272 hypothetical protein YP_005275789.1 KEGG: sbm:Shew185_3245 hypothetical protein YP_005275790.1 KEGG: ppg:PputGB1_4153 SMC domain-containing protein YP_005275791.1 PFAM: UvrD/REP helicase; KEGG: ppg:PputGB1_4154 UvrD/REP helicase YP_005275792.1 PFAM: integrase family protein; KEGG: plu:plu0125 hypothetical protein YP_005275793.1 KEGG: sbc:SbBS512_E4108 putative transporter; manually curated; TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter YP_005275794.1 PFAM: glycoside hydrolase family 31; KEGG: efe:EFER_3949 alpha-xylosidase YicI YP_005275795.1 PFAM: AsmA family protein; KEGG: ebd:ECBD_0069 AsmA family protein YP_005275796.1 KEGG: ssn:SSON_3751 putative transport protein; TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease YP_005275797.1 KEGG: eok:G2583_4390 glutamate transport protein; TIGRFAM: sodium/glutamate symporter; PFAM: sodium/glutamate symporter YP_005275798.1 KEGG: ebd:ECBD_0072 hypothetical protein YP_005275799.1 TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; KEGG: ssn:SSON_3753 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase ; helicase domain protein YP_005275800.1 KEGG: sbo:SBO_3726 tRNA guanosine-2'-O-methyltransferase; PFAM: tRNA/rRNA methyltransferase (SpoU) YP_005275801.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: RelA/SpoT family protein; KEGG: sbc:SbBS512_E4101 bifunctional (p)ppGpp synthetase II/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase; PFAM: RelA/SpoT domain protein; metal-dependent phosphohydrolase HD sub domain; TGS domain-containing protein YP_005275802.1 KEGG: cko:CKO_05106 DNA-directed RNA polymerase subunit omega; TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6 YP_005275803.1 SMART: guanylate kinase/L-type calcium channel region; TIGRFAM: guanylate kinase; KEGG: sbc:SbBS512_E4099 guanylate kinase; PFAM: guanylate kinase YP_005275804.1 PFAM: NAD-dependent DNA ligase adenylation; NAD-dependent DNA ligase OB-fold; KEGG: eoi:ECO111_4469 NAD-dependent DNA ligase LigB; SMART: NAD-dependent DNA ligase YP_005275805.1 PFAM: Uncharacterised protein family UPF0126; KEGG: sdy:SDY_4077 hypothetical protein YP_005275806.1 KEGG: eoi:ECO111_4467 DNA-damage-inducible protein D YP_005275807.1 PFAM: YicC-like domain-containing protein; domain of unknown function DUF1732; KEGG: ssn:SSON_3762 hypothetical protein YP_005275808.1 TIGRFAM: ribonuclease PH; KEGG: sbc:SbBS512_E4068 ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2 YP_005275809.1 TIGRFAM: orotate phosphoribosyltransferase; KEGG: sbc:SbBS512_E4067 orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_005275810.1 PFAM: regulatory protein TetR; KEGG: sdy:SDY_4071 nucleoid occlusion protein YP_005275811.1 TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; KEGG: ebd:ECBD_0086 deoxyuridine 5'-triphosphate nucleotidohydrolase; PFAM: deoxyUTP pyrophosphatase YP_005275812.1 TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; KEGG: sfx:S4090 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein YP_005275813.1 KEGG: sfx:S4091 DNA repair protein RadC; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC YP_005275814.1 KEGG: kpu:KP1_5329 50S ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28 YP_005275815.1 KEGG: pam:PANA_3902 RpmG; TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33 YP_005275816.1 TIGRFAM: formamidopyrimidine-DNA glycosylase; KEGG: eoh:ECO103_4547 formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; DNA glycosylase/AP lyase, H2TH DNA-binding YP_005275817.1 TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; KEGG: sbc:SbBS512_E4059 phosphopantetheine adenylyltransferase; PFAM: cytidylyltransferase YP_005275818.1 PFAM: Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; glycosyl transferase group 1; KEGG: ssn:SSON_3774 3-deoxy-D-manno-octulosonic-acid transferase YP_005275819.1 KEGG: sdy:SDY_4062 lipopolysaccharide core biosynthesis protein; TIGRFAM: lipopolysaccharide heptosyltransferase III; PFAM: glycosyl transferase family 9 YP_005275820.1 PFAM: glycosyl transferase group 1; KEGG: eoh:ECO103_4551 glucosyltransferase I RfaG YP_005275821.1 KEGG: sdy:SDY_4060 putative LPS biosynthesis enzyme YP_005275822.1 KEGG: ebd:ECBD_0097 lipopolysaccharide 3-alpha-galactosyltransferase; PFAM: glycosyl transferase family 8; Glycosyl transferase family 8 domain protein YP_005275823.1 KEGG: sbc:SbBS512_E4053 lipopolysaccharide 1,2-glucosyltransferase; PFAM: glycosyl transferase family 8; Glycosyl transferase family 8 domain protein YP_005275824.1 KEGG: sdy:SDY_4057 lipopolysaccharide core biosynthesis protein YP_005275825.1 KEGG: ssn:SSON_3781 UDP-galactose:(galactosyl) LPS alpha1,2-galactosyltransferase; PFAM: glycosyl transferase family 8; Glycosyl transferase family 8 domain protein YP_005275826.1 PFAM: glycosyl transferase family 2; KEGG: ssn:SSON_3782 putative beta1,3-glucosyltransferase YP_005275827.1 PFAM: O-antigen polymerase; KEGG: sbc:SbBS512_E4049 O-antigen polymerase YP_005275828.1 KEGG: ssn:SSON_3784 ADP-heptose:LPS heptosyl transferase I; TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9 YP_005275829.1 KEGG: sdy:SDY_4052 ADP-heptose:LPS heptosyltransferase II; TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9 YP_005275830.1 KEGG: sbc:SbBS512_E4046 ADP-L-glycero-D-mannoheptose-6-epimerase; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_005275831.1 TIGRFAM: 2-amino-3-ketobutyrate coenzyme A ligase; KEGG: sfx:S4110 2-amino-3-ketobutyrate coenzyme A ligase; PFAM: aminotransferase class I and II YP_005275832.1 KEGG: sbc:SbBS512_E4044 L-threonine 3-dehydrogenase; TIGRFAM: L-threonine 3-dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein YP_005275833.1 PFAM: glycosyl transferase family 2; KEGG: eoh:ECO103_4564 putative glycosyl transferase YP_005275834.1 PFAM: protein of unknown function DUF610 YibQ; KEGG: ebd:ECBD_0111 protein of unknown function DUF610 YibQ YP_005275835.1 PFAM: Peptidase M23; KEGG: eok:G2583_4352 hypothetical protein YP_005275836.1 PFAM: BPG-independent PGAM domain protein; metalloenzyme domain protein; manually curated; KEGG: sbc:SbBS512_E4040 phosphoglyceromutase; TIGRFAM: phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent YP_005275837.1 KEGG: sbc:SbBS512_E4039 rhodanese domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_005275838.1 KEGG: sdy:SDY_4043 glutaredoxin 3; TIGRFAM: glutaredoxin 3; PFAM: glutaredoxin YP_005275839.1 KEGG: sbc:SbBS512_E4037 preprotein translocase subunit SecB; TIGRFAM: protein-export protein SecB; PFAM: protein export chaperone SecB YP_005275840.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: sdy:SDY_4041 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_005275841.1 TIGRFAM: serine O-acetyltransferase; KEGG: sdy:SDY_4040 serine acetyltransferase YP_005275842.1 KEGG: ebw:BWG_3297 putative tRNA/rRNA methyltransferase YibK; TIGRFAM: RNA methyltransferase, TrmH family, group 2; PFAM: tRNA/rRNA methyltransferase (SpoU) YP_005275843.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: ssn:SSON_3800 L-lactate dehydrogenase YP_005275844.1 KEGG: sbo:SBO_3609 DNA-binding transcriptional repressor LldR; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_005275845.1 KEGG: eoh:ECO103_4576 L-lactate permease; TIGRFAM: L-lactate transport; PFAM: L-lactate permease YP_005275846.1 PFAM: YadA domain-containing protein; Haemagluttinin domain protein; Hep_Hag repeat-containing protein; KEGG: eoh:ECO103_4577 putative adhesin YP_005275847.1 KEGG: sfv:SFV_3931 putative inner membrane lipoprotein YP_005275848.1 KEGG: sbc:SbBS512_E4020 hypothetical protein YP_005275849.1 KEGG: sbc:SbBS512_E4019 hypothetical protein YP_005275850.1 PFAM: Mannitol repressor; KEGG: ssn:SSON_3807 mannitol repressor protein YP_005275851.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: sfv:SFV_3937 mannitol-1-phosphate 5-dehydrogenase YP_005275852.1 KEGG: sbc:SbBS512_E4016 PTS system, mannitol-specific IIABC component; TIGRFAM: PTS system, mannitol-specific IIC subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphotransferase system EIIC; phosphotransferase system lactose/cellobiose-specific IIB subunit YP_005275853.1 KEGG: sbc:SbBS512_E4015 hypothetical protein YP_005275854.1 PFAM: secretion protein HlyD family protein; KEGG: ebd:ECBD_0131 secretion protein HlyD family protein YP_005275855.1 manually curated; KEGG: eoh:ECO103_4586 hypothetical protein YP_005275856.1 KEGG: ebw:BWG_3285 hypothetical protein YP_005275857.1 PFAM: RHS protein; KEGG: ebd:ECBD_0135 rhs protein YP_005275858.1 PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: ebd:ECBD_0136 hypothetical protein YP_005275859.1 KEGG: eoh:ECO103_4590 hypothetical protein YP_005275860.1 KEGG: eoi:ECO111_4290 RhsB core protein with extension; TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein YP_005275861.1 PFAM: Glutathione S-transferase domain; KEGG: sbc:SbBS512_E4007 putative glutathione S-transferase YP_005275862.1 TIGRFAM: L-seryl-tRNA selenium transferase; KEGG: ebd:ECBD_0139 selenocysteine synthase; PFAM: Pyridoxal phosphate-dependent transferase YP_005275863.1 KEGG: eoi:ECO111_4410 selenocysteinyl-tRNA-specific translation factor; TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3 YP_005275864.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: eoh:ECO103_4645 putative alcohol dehydrogenase YP_005275865.1 PFAM: Aldehyde Dehydrogenase; KEGG: sbc:SbBS512_E4003 aldehyde dehydrogenase B YP_005275866.1 KEGG: sfv:SFV_3946 hypothetical protein YP_005275867.1 KEGG: eoh:ECO103_4647 hypothetical protein YP_005275868.1 PFAM: secretion protein HlyD family protein; KEGG: eoh:ECO103_4648 membrane fusion protein (MFP) component of efflux pump, signal anchor YP_005275869.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: eok:G2583_4320 transcriptional regulator YP_005275870.1 PFAM: MltA-interacting MipA family protein; KEGG: sfv:SFV_3952 putative outer membrane protein YP_005275871.1 KEGG: ebd:ECBD_0151 L-ribulose-5-phosphate 4-epimerase; TIGRFAM: L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein YP_005275872.1 TIGRFAM: hexulose-6-phosphate isomerase; KEGG: ebw:BWG_3272 putative L-xylulose 5-phosphate 3-epimerase; PFAM: Xylose isomerase domain-containing protein TIM barrel YP_005275873.1 PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: eoh:ECO103_4653 3-keto-L-gulonate-6-phosphate decarboxylase YP_005275874.1 PFAM: Carbohydrate kinase, FGGY-like; KEGG: eoh:ECO103_4654 L-xylulose kinase YP_005275875.1 KEGG: sfv:SFV_3960 putative solute-binding transport protein; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7 YP_005275876.1 KEGG: ebd:ECBD_0156 TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit YP_005275877.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: sbc:SbBS512_E3945 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM YP_005275878.1 PFAM: Conserved hypothetical protein CHP00022; KEGG: eoh:ECO103_4658 hypothetical protein YP_005275879.1 PFAM: Malate/L-lactate dehydrogenase; KEGG: sfx:S4150 2,3-diketo-L-gulonate reductase YP_005275880.1 KEGG: sbo:SBO_3582 putative regulator; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_005275881.1 KEGG: sbo:SBO_3581 hypothetical protein YP_005275882.1 KEGG: sfv:SFV_3968 valine--pyruvate transaminase; manually curated; PFAM: aminotransferase class I and II YP_005275883.1 KEGG: eoh:ECO103_4663 periplasmic alpha-amylase precursor; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_005275884.1 KEGG: sbc:SbBS512_E3952 hypothetical protein; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; SMART: Lysozyme subfamily 2 YP_005275885.1 KEGG: sbc:SbBS512_E3953 xylose operon regulatory protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_005275886.1 PFAM: inner-membrane translocator; KEGG: sbc:SbBS512_E3954 D-xylose ABC transporter, permease protein YP_005275887.1 TIGRFAM: D-xylose ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: eoh:ECO103_4667 xylose transporter ATP-binding subunit; SMART: AAA ATPase YP_005275888.1 KEGG: eoh:ECO103_4668 D-xylose transporter subunit XylF; TIGRFAM: D-xylose ABC transporter, periplasmic substrate-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator YP_005275889.1 TIGRFAM: xylose isomerase; KEGG: ebd:ECBD_0169 xylose isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel YP_005275890.1 KEGG: eoh:ECO103_4670 xylulokinase XylB; TIGRFAM: xylulokinase; PFAM: Carbohydrate kinase, FGGY-like YP_005275891.1 PFAM: YiaAB two helix domain-containing protein; KEGG: sbo:SBO_3571 hypothetical protein YP_005275892.1 PFAM: YiaAB two helix domain-containing protein; KEGG: eoh:ECO103_4672 hypothetical protein YP_005275893.1 PFAM: acyltransferase 3; KEGG: sfv:SFV_3979 hypothetical protein YP_005275894.1 KEGG: sbc:SbBS512_E3964 hypothetical protein YP_005275895.1 TIGRFAM: glycyl-tRNA synthetase, alpha subunit; KEGG: cko:CKO_05016 glycyl-tRNA synthetase subunit alpha; PFAM: glycyl-tRNA synthetase alpha subunit YP_005275896.1 TIGRFAM: glycyl-tRNA synthetase, beta subunit; KEGG: ssn:SSON_3830 glycyl-tRNA synthetase subunit beta YP_005275897.1 KEGG: sfx:S1483 IS103 orf YP_005275898.1 KEGG: ebd:ECBD_4284 integrase catalytic region; manually curated; PFAM: Integrase catalytic region YP_005275899.1 PFAM: Hok/gef cell toxic protein; KEGG: eok:G2583_4299 small toxic polypeptide YP_005275900.1 KEGG: cko:CKO_05012 major cold shock protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_005275901.1 KEGG: sdy:SDY_4348 putative transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_005275902.1 KEGG: eoh:ECO103_4680 hypothetical protein YP_005275903.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: sbc:SbBS512_E3973 2-ketogluconate reductase YP_005275904.1 PFAM: OmpA/MotB domain protein; KEGG: eok:G2583_4294 inner membrane lipoprotein YiaD precursor YP_005275905.1 TIGRFAM: molybdopterin guanine dinucleotide-containing S/N-oxide reductase; KEGG: eoh:ECO103_4683 biotin sulfoxide reductase BisC; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region YP_005275906.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ssn:SSON_3840 hypothetical protein YP_005275907.1 TIGRFAM: DNA-3-methyladenine glycosylase I; KEGG: ssn:SSON_3841 3-methyl-adenine DNA glycosylase I; PFAM: methyladenine glycosylase YP_005275908.1 KEGG: sbc:SbBS512_E3978 hypothetical protein YP_005275909.1 KEGG: ssn:SSON_3843 putative resistance protein; TIGRFAM: Oxalate/Formate Antiporter; PFAM: major facilitator superfamily MFS_1 YP_005275910.1 PFAM: Fimbrial protein domain-containing protein; KEGG: eoh:ECO103_4688 putative major fimbrial subunit YP_005275911.1 PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: eoi:ECO111_4365 putative fimbrial chaperone protein YP_005275912.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: eoh:ECO103_4690 putative fimbrial usher protein YP_005275913.1 KEGG: eoh:ECO103_4691 putative minor fimbrial subunit YP_005275914.1 PFAM: Fimbrial protein domain-containing protein; KEGG: sbc:SbBS512_E3982 protein LpfE YP_005275915.1 PFAM: sulfatase; protein of unknown function DUF1705; KEGG: sbc:SbBS512_E3983 phosphoethanolamine transferase YP_005275916.1 PFAM: extracellular solute-binding protein family 5; KEGG: ebd:ECBD_0192 extracellular solute-binding protein family 5 YP_005275917.1 manually curated; KEGG: sbc:SbBS512_E3987 hypothetical protein YP_005275918.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eoi:ECO111_4359 dipeptide transporter permease DppB YP_005275919.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: efe:EFER_3539 dipeptide transporter YP_005275920.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: sbo:SBO_3540 dipeptide transporter ATP-binding subunit; SMART: AAA ATPase YP_005275921.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: eoi:ECO111_4356 dipeptide transporter ATP-binding subunit; SMART: AAA ATPase YP_005275922.1 TIGRFAM: serine transporter; KEGG: sbc:SbBS512_E3992 serine transporter family protein YP_005275923.1 KEGG: sbc:SbBS512_E3995 hypothetical protein YP_005275924.1 manually curated; KEGG: spq:SPAB_04504 hypothetical protein YP_005275925.1 KEGG: sbc:SbBS512_E3995 hypothetical protein YP_005275926.1 manually curated; KEGG: sfl:SF3572 hypothetical protein YP_005275927.1 TIGRFAM: cellulose synthase operon protein YhjU; KEGG: eok:G2583_4274 hypothetical protein YP_005275928.1 TIGRFAM: celllulose biosynthesis operon protein BcsF/YhjT; KEGG: sbc:SbBS512_E3999 cellulose biosynthesis protein BcsF YP_005275929.1 TIGRFAM: cellulose biosynthesis protein BcsE; KEGG: ebr:ECB_03384 hypothetical protein YP_005275930.1 KEGG: sbo:SBO_3534 hypothetical protein YP_005275931.1 KEGG: eok:G2583_4270 ATPases involved in chromosome partitioning; TIGRFAM: cellulose synthase operon protein YhjQ; PFAM: Cellulose synthase operon protein YhjQ YP_005275932.1 KEGG: ebd:ECBD_0206 cellulose synthase catalytic subunit; TIGRFAM: cellulose synthase catalytic subunit (UDP-forming); PFAM: glycosyl transferase family 2; type IV pilus assembly PilZ YP_005275933.1 PFAM: Cellulose synthase BcsB; KEGG: ebd:ECBD_0207 cellulose synthase regulator protein YP_005275934.1 KEGG: eoh:ECO103_4259 endo-1,4-D-glucanase; PFAM: glycoside hydrolase family 8 YP_005275935.1 PFAM: cellulose synthase operon C domain protein; Tetratricopeptide TPR_1 repeat-containing protein; KEGG: eok:G2583_4266 cellulose synthase operon protein C YP_005275936.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; histidine kinase HAMP region domain protein; GGDEF domain containing protein; KEGG: sbc:SbBS512_E3935 putative phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein YP_005275937.1 PFAM: sodium:dicarboxylate symporter; KEGG: sbc:SbBS512_E3934 C4-dicarboxylate transporter DctA YP_005275938.1 PFAM: peptidase M16 domain protein; KEGG: sdy:SDY_4547 hypothetical protein YP_005275939.1 PFAM: PfkB domain protein; KEGG: eoh:ECO103_4254 ketodeoxygluconokinase KdgK YP_005275940.1 KEGG: sdy:SDY_4545 EAL domain-containing protein; PFAM: EAL domain protein; SMART: EAL domain protein YP_005275941.1 PFAM: AsmA family protein; KEGG: sbc:SbBS512_E3929 AsmA family protein YP_005275942.1 TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); KEGG: eoh:ECO103_4251 putative transporter YP_005275943.1 KEGG: sbc:SbBS512_E3927 putative ribonuclease; TIGRFAM: ribonuclease; PFAM: ribonuclease BN YP_005275944.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eoh:ECO103_4249 putative DNA-binding transcriptional regulator YP_005275945.1 KEGG: eoh:ECO103_4248 putative DNA-binding response regulator in two-component regulatory system; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_005275946.1 KEGG: ssn:SSON_3567 trehalase; PFAM: glycoside hydrolase family 37 YP_005275947.1 KEGG: eoh:ECO103_4246 putative cytochrome c peroxidase; PFAM: Di-haem cytochrome c peroxidase YP_005275948.1 TIGRFAM: glutamate decarboxylase; KEGG: sbo:SBO_3516 glutamate decarboxylase isozyme; PFAM: Pyridoxal-dependent decarboxylase YP_005275949.1 KEGG: sbc:SbBS512_E3914 DNA-binding transcriptional regulator GadX; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_005275950.1 KEGG: sbc:SbBS512_E3913 transcriptional regulator GadW; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_005275951.1 KEGG: efe:EFER_3040 hypothetical protein; putative exported protein YP_005275952.1 KEGG: ssn:SSON_3572 putative transport system permease protein; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_005275953.1 KEGG: sbo:SBO_3512 multidrug efflux system protein MdtE; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_005275954.1 KEGG: ebd:ECBD_0228 hypothetical protein YP_005275955.1 KEGG: ssn:SSON_3574 hypothetical protein YP_005275956.1 KEGG: sbc:SbBS512_E3909 acid-resistance membrane protein YP_005275957.1 PFAM: HNS-dependent expression A; KEGG: sdy:SDY_3543 acid-resistance protein YP_005275958.1 KEGG: sbc:SbBS512_E3907 acid-resistance protein YP_005275959.1 KEGG: ebd:ECBD_0233 putative Mg(2+) transport ATPase; manually curated; PFAM: MgtC/SapB transporter YP_005275960.1 KEGG: ebd:ECBD_0234 transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_005275961.1 KEGG: sbc:SbBS512_E3904 outer membrane lipoprotein, Slp family; TIGRFAM: outer membrane lipoprotein, Slp family; PFAM: outer membrane lipoprotein Slp YP_005275962.1 PFAM: permease; KEGG: eoh:ECO103_4232 hypothetical protein YP_005275963.1 KEGG: sbo:SBO_3502 hypothetical protein; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_005275964.1 TIGRFAM: arsenate reductase; KEGG: sbc:SbBS512_E3818 arsenate reductase; PFAM: arsenate reductase and related YP_005275965.1 KEGG: sbo:SBO_3500 arsenical pump membrane protein; TIGRFAM: arsenical pump membrane protein; PFAM: Arsenical pump membrane protein YP_005275966.1 KEGG: ssn:SSON_3736 DNA-binding transcriptional repressor ArsR; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_005275967.1 KEGG: ebd:ECBD_0240 hypothetical protein YP_005275968.1 KEGG: ebd:ECBD_0241 glutathione reductase; TIGRFAM: glutathione-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_005275969.1 PFAM: protein of unknown function DUF519; KEGG: sbo:SBO_3497 hypothetical protein YP_005275970.1 KEGG: ebd:ECBD_0243 oligopeptidase A; PFAM: peptidase M3A and M3B thimet/oligopeptidase F YP_005275971.1 PFAM: protein of unknown function DUF548; KEGG: ssn:SSON_3732 putative methyltransferase YP_005275972.1 KEGG: ebd:ECBD_0245 inner membrane transporter YhiP; TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region YP_005275973.1 PFAM: UspA domain-containing protein; KEGG: cro:ROD_43041 universal stress protein A YP_005275974.1 PFAM: Universal stress protein B; KEGG: sdy:SDY_3568 universal stress protein UspB YP_005275975.1 PFAM: phosphate transporter; KEGG: sdy:SDY_3569 low-affinity phosphate transport YP_005275976.1 PFAM: HI0933 family protein; KEGG: eoh:ECO103_4218 putative oxidoreductase YP_005275977.1 KEGG: eok:G2583_4217 inner membrane protein YhiM YP_005275978.1 KEGG: sfl:SF3505 hypothetical protein YP_005275979.1 KEGG: eoh:ECO103_4214 hypothetical protein YP_005275980.1 PFAM: secretion protein HlyD family protein; KEGG: efe:EFER_3479 putative HlyD family secretion protein YP_005275981.1 KEGG: ebd:ECBD_0254 ABC transporter related; PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase YP_005275982.1 PFAM: ABC-2 type transporter; KEGG: eoi:ECO111_4294 putative transporter subunit YP_005275983.1 KEGG: ssn:SSON_3720 hypothetical protein YP_005275984.1 KEGG: sdy:SDY_3636 nickel responsive regulator; TIGRFAM: nickel-responsive transcriptional regulator NikR; PFAM: NikR nickel binding YP_005275985.1 TIGRFAM: nickel import ATP-binding protein NikE; PFAM: ABC transporter related; KEGG: eoh:ECO103_4200 nickel transporter ATP-binding protein NikE; SMART: AAA ATPase YP_005275986.1 TIGRFAM: nickel import ATP-binding protein NikD; PFAM: ABC transporter related; KEGG: ebd:ECBD_0262 nickel transporter ATP-binding protein NikD; SMART: AAA ATPase YP_005275987.1 KEGG: ssn:SSON_3716 nickel transporter permease NikC; TIGRFAM: nickel ABC transporter, permease subunit NikC; PFAM: binding-protein-dependent transport systems inner membrane component YP_005275988.1 KEGG: sbc:SbBS512_E3844 nickel transporter permease NikB; TIGRFAM: nickel ABC transporter, permease subunit NikB; PFAM: binding-protein-dependent transport systems inner membrane component YP_005275989.1 KEGG: eoh:ECO103_4196 periplasmic binding protein for nickel NikA; TIGRFAM: nickel ABC transporter, periplasmic nickel-binding protein; PFAM: extracellular solute-binding protein family 5 YP_005275990.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: sbo:SBO_3472 holo-(acyl carrier protein) synthase 2 YP_005275991.1 PFAM: protein of unknown function UPF0118; KEGG: ebd:ECBD_0267 protein of unknown function UPF0118 YP_005275992.1 PFAM: major facilitator superfamily MFS_1; KEGG: sbc:SbBS512_E3849 major facilitator superfamily transporter YP_005275993.1 manually curated; KEGG: eoh:ECO103_4192 hypothetical protein YP_005275994.1 KEGG: sfx:S4274 hypothetical protein; TIGRFAM: conserved hypothetical protein; PFAM: protein of unknown function DUF165 YP_005275995.1 PFAM: SirA-like domain-containing protein; KEGG: sdy:SDY_3621 sulfur transfer protein SirA YP_005275996.1 KEGG: ssn:SSON_3707 zinc/cadmium/mercury/lead-transporting ATPase; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase YP_005275997.1 PFAM: YhhN family protein; KEGG: sbc:SbBS512_E3854 hypothetical protein YP_005275998.1 PFAM: Protein of unknown function DUF2500; KEGG: sbo:SBO_3464 putative receptor YP_005275999.1 PFAM: protein of unknown function DUF1145; KEGG: sdy:SDY_3617 hypothetical protein YP_005276000.1 TIGRFAM: methyltransferase; KEGG: sbo:SBO_3462 16S rRNA m(2)G966-methyltransferase; PFAM: Conserved hypothetical protein CHP00095 YP_005276001.1 TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; KEGG: eoh:ECO103_4184 cell division protein FtsY; SMART: AAA ATPase YP_005276002.1 TIGRFAM: Type II (General) Secretory Pathway (IISP) Family protein; cell division ATP-binding protein FtsE; PFAM: ABC transporter related; KEGG: sdy:SDY_3614 cell division protein FtsE; SMART: AAA ATPase YP_005276003.1 KEGG: sdy:SDY_3613 cell division protein FtsX; TIGRFAM: protein insertion ABC transporter, inner membrane subunit FtsX; PFAM: protein of unknown function DUF214 YP_005276004.1 KEGG: sdy:SDY_3612 RNA polymerase factor sigma-32; TIGRFAM: RNA polymerase sigma factor RpoH; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein YP_005276005.1 PFAM: Extracellular ligand-binding receptor; KEGG: sbo:SBO_3457 high-affinity amino acid transport system periplasmic binding protein YP_005276006.1 PFAM: protein of unknown function DUF1778; KEGG: eok:G2583_4162 hypothetical protein YP_005276007.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eok:G2583_4161 hypothetical protein YP_005276008.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbo:SBO_3456 hypothetical protein YP_005276009.1 PFAM: Extracellular ligand-binding receptor; KEGG: sbc:SbBS512_E3864 high-affinity branched-chain amino acid ABC transporter, periplasmic leucine-specific-binding protein LivK YP_005276010.1 PFAM: inner-membrane translocator; KEGG: sbc:SbBS512_E3865 branched-chain amino acid transporter permease subunit LivH YP_005276011.1 PFAM: inner-membrane translocator; KEGG: sbc:SbBS512_E3866 leucine/isoleucine/valine transporter permease subunit YP_005276012.1 KEGG: ssn:SSON_3693 leucine/isoleucine/valine transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_005276013.1 KEGG: ssn:SSON_3692 leucine/isoleucine/valine transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_005276014.1 PFAM: extracellular solute-binding protein family 1; KEGG: efe:EFER_3425 glycerol-3-phosphate transporter periplasmic binding protein YP_005276015.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eoi:ECO111_4260 glycerol-3-phosphate transporter permease YP_005276016.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbc:SbBS512_E3872 glycerol-3-phosphate transporter membrane protein YP_005276017.1 KEGG: eoi:ECO111_4258 glycerol-3-phosphate transporter ATP-binding subunit; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase YP_005276018.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: sbc:SbBS512_E3875 cytoplasmic glycerophosphodiester phosphodiesterase YP_005276019.1 KEGG: sbc:SbBS512_E3874 hypothetical protein YP_005276020.1 TIGRFAM: gamma-glutamyltransferase; KEGG: eoi:ECO111_4255 gamma-glutamyltranspeptidase; PFAM: gamma-glutamyltranspeptidase YP_005276021.1 KEGG: sbc:SbBS512_E3877 hypothetical protein YP_005276022.1 KEGG: ebd:ECBD_0296 hypothetical protein YP_005276023.1 KEGG: ebr:ECB_03294 hypothetical protein YP_005276024.1 KEGG: eoh:ECO103_4164 hypothetical protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; HNH endonuclease YP_005276025.1 KEGG: sfv:SFV_3449 putative acetyltransferase YhhY; manually curated; PFAM: GCN5-related N-acetyltransferase YP_005276026.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ebd:ECBD_0302 putative dehydrogenase YP_005276027.1 PFAM: Pirin domain protein; KEGG: sbc:SbBS512_E3886 pirin family protein YP_005276028.1 KEGG: eoi:ECO111_4248 DNA-binding transcriptional repressor GntR; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_005276029.1 TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; KEGG: ssn:SSON_3679 gluconate kinase 1; PFAM: shikimate kinase YP_005276030.1 KEGG: sdy:SDY_3587 low affinity gluconate transporter; TIGRFAM: gluconate transporter; PFAM: Gluconate transporter YP_005276031.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: sdy:SDY_3580 putative dITP- and XTP- hydrolase YP_005276032.1 TIGRFAM: aspartate-semialdehyde dehydrogenase; KEGG: sbo:SBO_3431 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding YP_005276033.1 TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; KEGG: ssn:SSON_3672 glycogen branching enzyme; SMART: alpha amylase catalytic sub domain YP_005276034.1 KEGG: eok:G2583_4132 glycogen debranching enzyme; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region YP_005276035.1 KEGG: sdy:SDY_3576 glucose-1-phosphate adenylyltransferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase YP_005276036.1 KEGG: ebd:ECBD_0313 glycogen synthase; TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain-containing protein; glycosyl transferase group 1 YP_005276037.1 TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; KEGG: sdy:SDY_3574 glycogen phosphorylase; PFAM: glycosyl transferase family 35 YP_005276038.1 KEGG: eoh:ECO103_4148 hypothetical protein YP_005276039.1 KEGG: eoh:ECO103_4147 hypothetical protein YP_005276040.1 KEGG: eoh:ECO103_4146 hypothetical protein YP_005276041.1 KEGG: eoh:ECO103_4145 hypothetical protein YP_005276042.1 KEGG: sfl:SF3448 glycerol-3-phosphate dehydrogenase; PFAM: FAD dependent oxidoreductase YP_005276043.1 PFAM: Rhodanese domain protein; KEGG: ssn:SSON_3662 thiosulfate sulfurtransferase; SMART: Rhodanese domain protein YP_005276044.1 KEGG: eoh:ECO103_4142 intramembrane serine protease GlpG; PFAM: Rhomboid family protein YP_005276045.1 KEGG: sdy:SDY_3652 DNA-binding transcriptional repressor GlpR; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_005276046.1 KEGG: eoh:ECO103_4140 sigma 54-dependent transcriptional regulator of rtcBA expression; PFAM: regulator of RNA terminal phosphate cyclase; sigma-54 factor interaction domain-containing protein; SMART: AAA ATPase YP_005276047.1 PFAM: protein of unknown function UPF0027; KEGG: eoi:ECO111_4229 hypothetical protein YP_005276048.1 TIGRFAM: RNA 3'-phosphate cyclase; KEGG: eoi:ECO111_4228 RNA 3'-terminal-phosphate cyclase; PFAM: RNA 3'-terminal phosphate cyclase; RNA 3'-terminal phosphate cyclase insert region YP_005276049.1 KEGG: eok:G2583_4115 transcriptional regulator MalT; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_005276050.1 TIGRFAM: 4-alpha-glucanotransferase; KEGG: ssn:SSON_3548 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77 YP_005276051.1 KEGG: sbc:SbBS512_E3796 high-affinity gluconate transporter; TIGRFAM: gluconate transporter; PFAM: Gluconate transporter YP_005276052.1 KEGG: sdy:SDY_3662 putative DNA uptake protein; TIGRFAM: IscR-regulated protein YhgI; PFAM: HesB/YadR/YfhF-family protein; nitrogen-fixing NifU domain protein YP_005276053.1 KEGG: sfv:SFV_3421 gluconate periplasmic binding protein; TIGRFAM: comF family protein; PFAM: phosphoribosyltransferase YP_005276054.1 TIGRFAM: bioH protein; KEGG: eoi:ECO111_4221 carboxylesterase BioH; PFAM: alpha/beta hydrolase fold YP_005276055.1 PFAM: protein of unknown function DUF1920; KEGG: sdy:SDY_3666 hypothetical protein YP_005276056.1 KEGG: sbc:SbBS512_E3790 ferrous iron transport protein B; TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: Ferrous iron transport protein B domain-containing protein; GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport B domain-containing protein YP_005276057.1 KEGG: sdy:SDY_3668 ferrous iron transport protein A; PFAM: FeoA family protein; SMART: FeoA family protein YP_005276058.1 KEGG: sbc:SbBS512_E3786 putative transcriptional accessory protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold YP_005276059.1 KEGG: sdy:SDY_3670 transcription elongation factor GreB; TIGRFAM: transcription elongation factor GreB; PFAM: transcription elongation factor GreA/GreB domain-containing protein YP_005276060.1 KEGG: pam:PANA_3682 OmpR; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_005276061.1 KEGG: sdy:SDY_3672 osmolarity sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_005276062.1 KEGG: efe:EFER_3371 putative HTH-type transcriptional regulator YiaG YP_005276063.1 KEGG: efe:EFER_3370 hypothetical protein YP_005276064.1 TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); KEGG: sbc:SbBS512_E3782 phosphoenolpyruvate carboxykinase; PFAM: phosphoenolpyruvate carboxykinase (ATP) YP_005276065.1 KEGG: eok:G2583_4098 hypothetical protein YP_005276066.1 PFAM: Hsp33 protein; KEGG: sdy:SDY_3677 HSP33-like chaperonin YP_005276067.1 KEGG: sdy:SDY_3678 ribosome-associated heat shock protein HSP15; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_005276068.1 KEGG: sdy:SDY_3679 putative phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_005276069.1 PFAM: Intracellular growth attenuator IgaA; KEGG: eoh:ECO103_4116 putative inner membrane protein YP_005276070.1 PFAM: NUDIX hydrolase; KEGG: sbc:SbBS512_E3774 ADP-ribose diphosphatase NudE YP_005276071.1 TIGRFAM: penicillin-binding protein, 1A family; KEGG: ebd:ECBD_0351 peptidoglycan synthetase; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_005276072.1 KEGG: eoi:ECO111_4204 putative pilus assembly protein YP_005276073.1 PFAM: Fimbrial assembly family protein; KEGG: eoh:ECO103_4112 putative fimbrial assembly protein YP_005276074.1 KEGG: sfv:SFV_3398 hypothetical protein YP_005276075.1 KEGG: sdy:SDY_3687 hypothetical protein YP_005276076.1 manually curated; TIGRFAM: type IV pilus secretin PilQ; KEGG: ebd:ECBD_0356 outer membrane porin HofQ; PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain YP_005276077.1 KEGG: sdy:SDY_3689 shikimate kinase I; PFAM: shikimate kinase YP_005276078.1 TIGRFAM: 3-dehydroquinate synthase; KEGG: sbo:SBO_3376 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase YP_005276079.1 PFAM: Sporulation domain-containing protein; KEGG: ebd:ECBD_0359 hypothetical protein YP_005276080.1 KEGG: sbc:SbBS512_E3764 DNA adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase YP_005276081.1 TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: sbc:SbBS512_E3763 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase YP_005276082.1 KEGG: sbc:SbBS512_E3762 phosphoglycolate phosphatase; TIGRFAM: phosphoglycolate phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_005276083.1 TIGRFAM: tryptophanyl-tRNA synthetase; KEGG: ebd:ECBD_0363 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_005276084.1 KEGG: eoh:ECO103_4101 hypothetical protein YP_005276085.1 KEGG: sbc:SbBS512_E3759 hypothetical protein YP_005276086.1 PFAM: alanine racemase domain protein; KEGG: eoi:ECO111_4190 putative amino acid racemase YP_005276087.1 KEGG: eoi:ECO111_4189 putative mutase; PFAM: metalloenzyme domain protein YP_005276088.1 PFAM: aryldialkylphosphatase; KEGG: eoi:ECO111_4188 putative hydrolase YP_005276089.1 KEGG: sbc:SbBS512_E3755 hypothetical protein YP_005276090.1 PFAM: Protein of unknown function, YhfT; KEGG: eoh:ECO103_4095 hypothetical protein YP_005276091.1 PFAM: aminotransferase class I and II; KEGG: ebw:BWG_3067 hypothetical protein YP_005276092.1 KEGG: sbc:SbBS512_E3752 DNA-binding transcriptional regulator FrlR; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_005276093.1 PFAM: PfkB domain protein; KEGG: sbc:SbBS512_E3751 fructoselysine 6-kinase YP_005276094.1 PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: eoh:ECO103_4091 fructoselysine 3-epimerase YP_005276095.1 PFAM: sugar isomerase (SIS); KEGG: sfv:SFV_3377 fructoselysine-6-P-deglycase YP_005276096.1 PFAM: amino acid permease-associated region; KEGG: ssn:SSON_3502 putative fructoselysine transporter YP_005276097.1 KEGG: sbc:SbBS512_E3747 putative lipoprotein YP_005276098.1 KEGG: ebd:ECBD_0380 siroheme synthase; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Sirohaem synthase, dimerisation domain YP_005276099.1 KEGG: sfv:SFV_3373 nitrite transporter NirC; TIGRFAM: formate/nitrite transporter; PFAM: formate/nitrite transporter YP_005276100.1 KEGG: sdy:SDY_3528 nitrite reductase small subunit; TIGRFAM: nitrite reductase [NAD(P)H], small subunit YP_005276101.1 KEGG: sbc:SbBS512_E3741 nitrite reductase [NAD(P)H], large subunit; TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region YP_005276102.1 PFAM: major facilitator superfamily MFS_1; KEGG: eoh:ECO103_4083 hypothetical protein YP_005276103.1 KEGG: sbc:SbBS512_E3738 peptidyl-prolyl cis-trans isomerase A (rotamase A); PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type YP_005276104.1 KEGG: ssn:SSON_3493 hypothetical protein YP_005276105.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: eoh:ECO103_4080 cell filamentation protein Fic YP_005276106.1 KEGG: ebd:ECBD_0388 para-aminobenzoate synthase component II; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I YP_005276107.1 TIGRFAM: succinylornithine transaminase family; acetylornithine and succinylornithine aminotransferase; KEGG: eoh:ECO103_4078 bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; PFAM: aminotransferase class-III YP_005276108.1 TIGRFAM: integral membrane protein, YccS/YhfK family; KEGG: sbc:SbBS512_E3734 integral membrane protein, YccS/YhfK family YP_005276109.1 KEGG: etr:ETAE_3299 cAMP-regulatory protein; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_005276110.1 PFAM: OsmC family protein; KEGG: sdy:SDY_3518 hypothetical protein YP_005276111.1 KEGG: sbo:SBO_3335 phosphoribulokinase YP_005276112.1 PFAM: protein of unknown function UPF0270; KEGG: sbc:SbBS512_E3729 hypothetical protein YP_005276113.1 PFAM: alpha/beta hydrolase fold; KEGG: eoh:ECO103_4072 putative hydrolase YP_005276114.1 KEGG: ssn:SSON_3483 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_005276115.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: efe:EFER_3322 glutathione-regulated potassium-efflux system ancillary protein KefG YP_005276116.1 KEGG: ssn:SSON_3481 glutathione-regulated potassium-efflux system protein KefB; TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein YP_005276117.1 PFAM: Conserved hypothetical protein CHP02443; KEGG: sdy:SDY_3511 hypothetical protein YP_005276118.1 KEGG: sbc:SbBS512_E3723 FKBP-type peptidyl-prolyl cis-trans isomerase; PFAM: peptidylprolyl isomerase FKBP-type YP_005276119.1 PFAM: SlyX family protein; KEGG: sdy:SDY_3509 hypothetical protein YP_005276120.1 KEGG: sbo:SBO_3327 FKBP-type peptidyl-prolyl cis-trans isomerase; PFAM: FKBP-type peptidyl-prolyl isomerase domain protein; peptidylprolyl isomerase FKBP-type YP_005276121.1 PFAM: YheO-like domain-containing protein; KEGG: sbc:SbBS512_E3720 hypothetical protein YP_005276122.1 KEGG: ebd:ECBD_0404 sulfur transfer complex subunit TusD; TIGRFAM: sulfur relay protein TusD/DsrE; PFAM: DsrE family protein YP_005276123.1 KEGG: sbc:SbBS512_E3718 sulfur relay protein TusC; TIGRFAM: sulfur relay protein TusC/DsrF; PFAM: DsrE family protein YP_005276124.1 KEGG: sbc:SbBS512_E3717 sulfur transfer complex subunit TusB; TIGRFAM: sulfur relay protein TusB/DsrH; PFAM: DsrH family protein YP_005276125.1 KEGG: cro:ROD_44771 30S ribosomal subunit protein S12; TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23 YP_005276126.1 KEGG: sbc:SbBS512_E3715 30S ribosomal protein S7; TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7 YP_005276127.1 KEGG: sdy:SDY_3501 elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain-containing protein YP_005276128.1 KEGG: ses:SARI_04181 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain-containing protein YP_005276129.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: sdy:SDY_3499 bacterioferritin-associated ferredoxin YP_005276130.1 KEGG: sfv:SFV_3342 bacterioferritin; TIGRFAM: bacterioferritin; PFAM: Ferritin Dps family protein YP_005276131.1 PFAM: peptidase A24A prepilin type IV; KEGG: eoh:ECO103_4054 leader peptidase HopD YP_005276132.1 KEGG: sdy:SDY_3497 30S ribosomal protein S10; TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10 YP_005276133.1 KEGG: sdy:SDY_3496 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: ribosomal protein L3 YP_005276134.1 PFAM: ribosomal protein L4/L1e; KEGG: cro:ROD_45031 50S ribosomal subunit protein L4 YP_005276135.1 PFAM: Ribosomal protein L25/L23; KEGG: sbc:SbBS512_E3703 50S ribosomal protein L23 YP_005276136.1 KEGG: ctu:Ctu_38440 50S ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2 YP_005276137.1 KEGG: cro:ROD_45061 30S ribosomal subunit protein S19; TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15 YP_005276138.1 KEGG: cro:ROD_45071 50S ribosomal subunit protein L22; TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17 YP_005276139.1 TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; Ribosomal protein S3 domain; KH type 2 domain protein; KEGG: cro:ROD_45081 30S ribosomal subunit protein S3; SMART: KH domain protein YP_005276140.1 KEGG: cko:CKO_04727 50S ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L10e/L16 YP_005276141.1 KEGG: sbc:SbBS512_E3697 50S ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29 YP_005276142.1 KEGG: ctu:Ctu_38380 30S ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: ribosomal protein S17 YP_005276143.1 KEGG: sdy:SDY_3486 50S ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e YP_005276144.1 TIGRFAM: ribosomal protein L24; PFAM: KOW domain protein; KEGG: dda:Dd703_0416 50S ribosomal protein L24; SMART: KOW domain protein YP_005276145.1 KEGG: kpu:KP1_5029 50S ribosomal protein L5 YP_005276146.1 PFAM: ribosomal protein S14; KEGG: sdy:SDY_3483 30S ribosomal protein S14 YP_005276147.1 PFAM: ribosomal protein S8; KEGG: cko:CKO_04720 30S ribosomal protein S8 YP_005276148.1 KEGG: sdy:SDY_3481 50S ribosomal protein L6; TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain YP_005276149.1 KEGG: cko:CKO_04717 50S ribosomal protein L18; TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E YP_005276150.1 KEGG: cro:ROD_45191 30S ribosomal subunit protein S5; TIGRFAM: ribosomal protein S5; PFAM: ribosomal protein S5 domain protein; Ribosomal protein S5 YP_005276151.1 KEGG: sdy:SDY_3478 50S ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30 YP_005276152.1 TIGRFAM: ribosomal protein L15; KEGG: cko:CKO_04713 50S ribosomal protein L15 YP_005276153.1 KEGG: sbc:SbBS512_E3685 preprotein translocase subunit SecY; TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein YP_005276154.1 KEGG: cro:ROD_45222 50S ribosomal subunit protein L36; TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36 YP_005276155.1 KEGG: sdy:SDY_3474 30S ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: ribosomal protein S13 YP_005276156.1 KEGG: cro:ROD_45241 30S ribosomal subunit protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: ribosomal protein S11 YP_005276157.1 TIGRFAM: ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: cko:CKO_04709 30S ribosomal protein S4; SMART: RNA-binding S4 domain protein YP_005276158.1 TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase insert; RNA polymerase dimerisation; RNA polymerase alpha subunit domain protein; KEGG: cro:ROD_45261 DNA-directed RNA polymerase alpha chain; SMART: RNA polymerase RpoA/D/Rpb3-type YP_005276159.1 KEGG: sdy:SDY_3470 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17 YP_005276160.1 PFAM: DnaJ homologue, subfamily C, member 28, conserved domain; KEGG: eok:G2583_4011 hypothetical protein YP_005276161.1 TIGRFAM: Zn(II)-responsive transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; KEGG: sdy:SDY_3468 zinc-responsive transcriptional regulator; SMART: regulatory protein MerR YP_005276162.1 PFAM: protein of unknown function DUF331; KEGG: eoh:ECO103_4023 hypothetical protein YP_005276163.1 KEGG: efe:EFER_3274 large-conductance mechanosensitive channel; TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel YP_005276164.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: sbc:SbBS512_E3674 potassium transporter peripheral membrane component YP_005276165.1 KEGG: eoh:ECO103_4020 16S rRNA methyltransferase B; TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44 YP_005276166.1 TIGRFAM: methionyl-tRNA formyltransferase; KEGG: eoh:ECO103_4019 methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein YP_005276167.1 KEGG: sdy:SDY_3463 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase YP_005276168.1 KEGG: eoj:ECO26_4387 DNA protecting protein DprA; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein YP_005276169.1 PFAM: protein of unknown function DUF494; KEGG: eoh:ECO103_4016 hypothetical protein YP_005276170.1 PFAM: DNA topoisomerase type IA zn finger domain protein; KEGG: sdy:SDY_3460 putative DNA topoisomerase YP_005276171.1 PFAM: SUA5/yciO/yrdC domain; KEGG: sbc:SbBS512_E3667 putative ribosome maturation factor YP_005276172.1 KEGG: eoi:ECO111_4101 shikimate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein YP_005276173.1 PFAM: protein of unknown function DUF1488; KEGG: sbc:SbBS512_E3664 hypothetical protein YP_005276174.1 manually curated; KEGG: eok:G2583_3998 hypothetical protein YP_005276175.1 KEGG: eoh:ECO103_4010 putative ATP-binding component of a transport system; PFAM: ABC transporter related; SMART: AAA ATPase YP_005276176.1 KEGG: eoh:ECO103_4009 putative transport system permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_005276177.1 KEGG: eoh:ECO103_4008 putative transport system permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_005276178.1 KEGG: eok:G2583_3987 putative amino-acid ABC transporter-binding protein YhdW precursor; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_005276179.1 KEGG: ebd:ECBD_0478 hypothetical protein YP_005276180.1 KEGG: eoh:ECO103_4005 multidrug efflux system protein; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_005276181.1 KEGG: eoh:ECO103_4004 cytoplasmic membrane lipoprotein AcrE; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_005276182.1 PFAM: Tetracycline transcriptional repressor MAATS-type domain-containing protein; regulatory protein TetR; KEGG: sbc:SbBS512_E3647 DNA-binding transcriptional regulator EnvR YP_005276183.1 KEGG: ebd:ECBD_0482 hypothetical protein YP_005276184.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: eoh:ECO103_4001 putative methyltransferase YP_005276185.1 PFAM: helix-turn-helix Fis-type; KEGG: etr:ETAE_3152 DNA-binding protein fis YP_005276186.1 manually curated; TIGRFAM: TIM-barrel protein, nifR3 family; KEGG: sdy:SDY_3437 tRNA-dihydrouridine synthase B; PFAM: dihydrouridine synthase DuS YP_005276187.1 KEGG: sdy:SDY_3436 ribosomal protein L11 methyltransferase; TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: ribosomal L11 methyltransferase YP_005276188.1 KEGG: ssn:SSON_3399 sodium/panthothenate symporter; TIGRFAM: sodium/pantothenate symporter; SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter YP_005276189.1 PFAM: protein of unknown function DUF997; KEGG: sdy:SDY_3434 hypothetical protein YP_005276190.1 KEGG: efe:EFER_3235 acetyl-CoA carboxylase biotin carboxylase subunit; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein YP_005276191.1 KEGG: sbc:SbBS512_E3287 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein YP_005276192.1 KEGG: ssn:SSON_3394 putative dehydrogenase; TIGRFAM: quinone oxidoreductase, YhdH/YhfP family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein YP_005276193.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: eoh:ECO103_3992 regulatory protein CsrD; SMART: EAL domain protein; GGDEF domain containing protein YP_005276194.1 KEGG: cro:ROD_45651 rod shape-determining protein; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl YP_005276195.1 KEGG: sdy:SDY_3425 rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC YP_005276196.1 KEGG: sbc:SbBS512_E3280 rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD; PFAM: Rod shape-determining protein MreD YP_005276197.1 KEGG: ssn:SSON_3389 Maf-like protein; TIGRFAM: maf protein; PFAM: Maf family protein YP_005276198.1 KEGG: sdy:SDY_3422 ribonuclease G; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein YP_005276199.1 KEGG: ebw:BWG_2946 hypothetical protein YP_005276200.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: sfv:SFV_3271 protease TldD YP_005276201.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sbo:SBO_3144 putative DNA-binding transcriptional regulator YP_005276202.1 KEGG: eok:G2583_3962 hypothetical protein; manually curated; PFAM: protein of unknown function DUF1656 YP_005276203.1 KEGG: sdy:SDY_3417 p-hydroxybenzoic acid efflux subunit AaeA; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_005276204.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: sfv:SFV_3267 p-hydroxybenzoic acid efflux subunit AaeB YP_005276205.1 PFAM: Barstar (barnase inhibitor); KEGG: sbc:SbBS512_E3537 hypothetical protein YP_005276206.1 PFAM: protein of unknown function DUF1471; KEGG: sbc:SbBS512_E3538 protein YcfR YP_005276207.1 KEGG: sdy:SDY_3413 arginine repressor; TIGRFAM: arginine repressor; PFAM: Arginine repressor-like YP_005276208.1 KEGG: eoi:ECO111_4056 malate dehydrogenase; TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: Lactate/malate dehydrogenase YP_005276209.1 SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: periplasmic serine protease DegS; KEGG: sdy:SDY_3411 serine endoprotease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_005276210.1 SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: sbc:SbBS512_E3542 serine endoprotease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_005276211.1 PFAM: protein of unknown function DUF1043; KEGG: sbc:SbBS512_E3543 cytochrome d ubiquinol oxidase subunit III YP_005276212.1 PFAM: AFG1-family ATPase; KEGG: eoh:ECO103_3973 hypothetical protein YP_005276213.1 KEGG: sfv:SFV_3258 50S ribosomal protein L13; TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13 YP_005276214.1 PFAM: ribosomal protein S9; KEGG: cro:ROD_45931 30S ribosomal subunit protein S9 YP_005276215.1 PFAM: Glutathione S-transferase domain; KEGG: sbc:SbBS512_E3547 stringent starvation protein A YP_005276216.1 PFAM: Stringent starvation protein B; KEGG: sbo:SBO_3161 ClpXP protease specificity-enhancing factor YP_005276217.1 KEGG: eoh:ECO103_3968 putative cryptic C4-dicarboxylate transporter DcuD; TIGRFAM: anaerobic c4-dicarboxylate antiporter, DcuC family; PFAM: C4-dicarboxylate anaerobic carrier-like YP_005276218.1 KEGG: ebd:ECBD_0521 transcriptional regulator NanR; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_005276219.1 KEGG: sdy:SDY_3400 N-acetylneuraminate lyase; TIGRFAM: N-acetylneuraminate lyase; PFAM: dihydrodipicolinate synthetase YP_005276220.1 KEGG: sbc:SbBS512_E3552 putative sialic acid transporter; TIGRFAM: sialic acid transporter; PFAM: major facilitator superfamily MFS_1 YP_005276221.1 KEGG: sbc:SbBS512_E3553 N-acetylmannosamine-6-phosphate 2-epimerase; PFAM: N-acetylmannosamine-6-phosphate epimerase YP_005276222.1 PFAM: ROK family protein; KEGG: ebd:ECBD_0525 N-acetylmannosamine kinase YP_005276223.1 PFAM: Conserved hypothetical protein CHP00022; KEGG: sfv:SFV_3246 hypothetical protein YP_005276224.1 PFAM: protein of unknown function DUF1016; KEGG: eoh:ECO103_3961 hypothetical protein YP_005276225.1 KEGG: sbc:SbBS512_E3557 glutamate synthase subunit beta; TIGRFAM: glutamate synthase, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_005276226.1 KEGG: eoh:ECO103_3959 glutamate synthase subunit alpha; PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein YP_005276227.1 TIGRFAM: conserved hypothetical protein; PFAM: Radical SAM domain protein; KEGG: eoh:ECO103_3958 putative Fe-S oxidoreductase; SMART: Elongator protein 3/MiaB/NifB YP_005276228.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; response regulator receiver; Hpt domain protein; KEGG: sbo:SBO_3172 aerobic respiration control sensor protein ArcB; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; response regulator receiver; Hpt domain protein YP_005276229.1 PFAM: ThiJ/PfpI domain-containing protein; KEGG: sbc:SbBS512_E3561 isoprenoid biosynthesis protein with amidotransferase-like domain YP_005276230.1 KEGG: ebd:ECBD_0534 monofunctional biosynthetic peptidoglycan transglycosylase; TIGRFAM: monofunctional biosynthetic peptidoglycan transglycosylase; PFAM: glycosyl transferase family 51 YP_005276231.1 PFAM: PhoP regulatory network protein YrbL; KEGG: sfx:S3465 hypothetical protein YP_005276232.1 KEGG: sdy:SDY_3387 phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr); TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr YP_005276233.1 KEGG: sbc:SbBS512_E3565 hypothetical protein YP_005276234.1 KEGG: sbc:SbBS512_E3566 PTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN; TIGRFAM: PTS IIA-like nitrogen-regulatory protein PtsN; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 YP_005276235.1 KEGG: sdy:SDY_3384 putative sigma(54) modulation protein; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA YP_005276236.1 KEGG: sbc:SbBS512_E3568 RNA polymerase factor sigma-54; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor core-binding region; sigma-54 factor; sigma-54 DNA-binding domain protein YP_005276237.1 KEGG: sdy:SDY_3382 putative ABC transporter ATP-binding protein YhbG; PFAM: ABC transporter related; SMART: AAA ATPase YP_005276238.1 KEGG: sdy:SDY_3381 lipopolysaccharide transport periplasmic protein LptA; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; PFAM: OstA family protein YP_005276239.1 PFAM: protein of unknown function DUF1239; KEGG: sdy:SDY_3380 hypothetical protein YP_005276240.1 TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: sfv:SFV_3228 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_005276241.1 TIGRFAM: KpsF/GutQ family protein; KEGG: sbc:SbBS512_E3573 D-arabinose 5-phosphate isomerase; PFAM: sugar isomerase (SIS); CBS domain containing protein YP_005276242.1 KEGG: sbo:SBO_3186 putative calcium/sodium:proton antiporter; TIGRFAM: Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region YP_005276243.1 KEGG: sdy:SDY_3376 putative ABC transporter ATP-binding protein YrbF; PFAM: ABC transporter related; SMART: AAA ATPase YP_005276244.1 PFAM: protein of unknown function DUF140; KEGG: sbc:SbBS512_E3576 toluene ABC transporter, permease protein YP_005276245.1 PFAM: Mammalian cell entry related domain protein; KEGG: sbc:SbBS512_E3577 Mce family protein YP_005276246.1 PFAM: toluene tolerance family protein; KEGG: sbc:SbBS512_E3578 toluene tolerance protein Ttg2D YP_005276247.1 KEGG: sdy:SDY_3372 hypothetical protein YP_005276248.1 PFAM: BolA family protein; KEGG: sdy:SDY_3371 hypothetical protein YP_005276249.1 KEGG: ssn:SSON_3337 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YP_005276250.1 KEGG: ssn:SSON_3336 DNA-binding transcriptional regulator Nlp YP_005276251.1 PFAM: Polyprenyl synthetase; KEGG: sbo:SBO_3195 octaprenyl diphosphate synthase YP_005276252.1 KEGG: cro:ROD_46342 50S ribosomal subunit protein L21; TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21 YP_005276253.1 KEGG: sdy:SDY_3366 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27 YP_005276254.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sbo:SBO_3198 hypothetical protein YP_005276255.1 KEGG: sbc:SbBS512_E3587 GTPase ObgE; TIGRFAM: GTP-binding protein Obg/CgtA; small GTP-binding protein; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related YP_005276256.1 TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; KEGG: sbc:SbBS512_E3588 D-alanyl-D-alanine carboxypeptidase/endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C YP_005276257.1 KEGG: sdy:SDY_3362 transcription elongation factor GreA; TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain-containing protein YP_005276258.1 PFAM: protein of unknown function UPF0044; KEGG: sbc:SbBS512_E3590 RNA-binding protein YhbY YP_005276259.1 KEGG: cko:CKO_04580 23S rRNA methyltransferase J; TIGRFAM: ribosomal RNA large subunit methyltransferase J; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ YP_005276260.1 SMART: AAA ATPase; TIGRFAM: ATP-dependent metalloprotease FtsH; KEGG: ebd:ECBD_0564 ATP-dependent metalloprotease; PFAM: peptidase M41; AAA ATPase central domain protein YP_005276261.1 TIGRFAM: dihydropteroate synthase; KEGG: ssn:SSON_3325 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_005276262.1 KEGG: sbc:SbBS512_E3594 phosphoglucosamine mutase; TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase YP_005276263.1 manually curated; TIGRFAM: preprotein translocase, SecG subunit; KEGG: cro:ROD_46581 protein-export membrane protein; PFAM: Preprotein translocase SecG subunit YP_005276264.1 PFAM: sulfatase; KEGG: ebd:ECBD_0568 sulfatase YP_005276265.1 TIGRFAM: argininosuccinate synthase; KEGG: eoi:ECO111_3995 argininosuccinate synthase; PFAM: argininosuccinate synthase YP_005276266.1 KEGG: eok:G2583_3895 hypothetical protein; manually curated; PFAM: protein of unknown function DUF150 YP_005276267.1 KEGG: ssn:SSON_3315 transcription elongation factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: NusA domain-containing protein; RNA binding S1 domain protein YP_005276268.1 KEGG: ebd:ECBD_0572 translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; Initiation factor 2 associated domain protein ; translation initiation factor IF-2 domain-containing protein; elongation factor Tu domain 2 protein YP_005276269.1 KEGG: sdy:SDY_3346 ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A YP_005276270.1 KEGG: ssn:SSON_3312 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B YP_005276271.1 KEGG: sdy:SDY_3344 30S ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15 YP_005276272.1 SMART: KH domain protein; TIGRFAM: polyribonucleotide nucleotidyltransferase; KEGG: ssn:SSON_3310 polynucleotide phosphorylase/polyadenylase; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding; K Homology, type 1, subgroup; RNA binding S1 domain protein YP_005276273.1 KEGG: ssn:SSON_3309 lipoprotein NlpI; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat YP_005276274.1 KEGG: eoi:ECO111_3986 ATP-dependent RNA helicase DeaD; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_005276275.1 KEGG: ssn:SSON_3307 tryptophan permease; TIGRFAM: aromatic amino acid transporter; PFAM: Tryptophan/tyrosine permease YP_005276276.1 KEGG: sbo:SBO_3222 hypothetical protein; TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup YP_005276277.1 PFAM: peptidase U32; KEGG: eok:G2583_3883 hypothetical protein YP_005276278.1 PFAM: peptidase U32; KEGG: eoh:ECO103_3907 putative peptidase YP_005276279.1 PFAM: Sterol-binding domain protein; KEGG: sdy:SDY_3336 hypothetical protein YP_005276280.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sdy:SDY_3335 hypothetical protein YP_005276281.1 KEGG: sdy:SDY_3334 GIY-YIG nuclease superfamily protein; PFAM: Excinuclease ABC C subunit domain protein; SMART: Excinuclease ABC C subunit domain protein YP_005276282.1 KEGG: sfv:SFV_3184 hypothetical protein YP_005276283.1 KEGG: sdy:SDY_3332 hypothetical protein; TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain-containing protein YP_005276284.1 PFAM: Semialdehyde dehydrogenase NAD - binding; KEGG: eoh:ECO103_3901 putative nucleoside-diphosphate-sugar epimerase YP_005276285.1 PFAM: permease; KEGG: eoh:ECO103_3900 putative permease YP_005276286.1 KEGG: ebd:ECBD_0590 hypothetical protein; PFAM: transport-associated; SMART: Transport-associated and nodulation region YP_005276287.1 PFAM: sugar isomerase (SIS); KEGG: efe:EFER_4346 DnaA initiator-associating protein DiaA YP_005276288.1 PFAM: Uncharacterised protein family UPF0102; KEGG: ssn:SSON_3294 hypothetical protein YP_005276289.1 KEGG: eoi:ECO111_3971 hypothetical protein YP_005276290.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: eoh:ECO103_3895 putative methyltransferase YP_005276291.1 KEGG: eoj:ECO26_4250 putative fimbrial-like adhesin protein YP_005276292.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: eoi:ECO111_3968 putative outer membrane protein YP_005276293.1 PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: eoh:ECO103_3890 putative periplasmic pilin chaperone YP_005276294.1 PFAM: Fimbrial protein domain-containing protein; KEGG: eoh:ECO103_3889 putative fimbrial-like adhesin protein YP_005276295.1 KEGG: sfx:S3393 galactosamine-6-phosphate isomerase; PFAM: glucosamine/galactosamine-6-phosphate isomerase YP_005276296.1 KEGG: sfx:S3392 PTS system N-acetylgalactosamine-specific transporter subunit IID; TIGRFAM: PTS system, mannose/fructose/sorbose family, IID subunit; PFAM: PTS system mannose/fructose/sorbose family IID component YP_005276297.1 KEGG: ebd:ECBD_0601 PTS system N-acetylgalactosamine-specific transporter subunit IIC; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIC subunit; PFAM: phosphotransferase system PTS sorbose-specific IIC subunit YP_005276298.1 TIGRFAM: PTS system, mannose/fructose/sorbose family, IIB subunit; KEGG: ebd:ECBD_0602 PTS system N-acetylgalactosamine-specific transporter subunit IIB; PFAM: PTS system sorbose subfamily IIB component YP_005276299.1 TIGRFAM: class II aldolase, tagatose bisphosphate family; ketose-bisphosphate aldolase; KEGG: ebd:ECBD_0603 tagatose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II YP_005276300.1 KEGG: ebw:BWG_2840 tagatose-6-phosphate ketose/aldose isomerase; TIGRFAM: sugar isomerase, AgaS family; PFAM: sugar isomerase (SIS) YP_005276301.1 TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: eoi:ECO111_3959 N-acetylgalactosamine-6-phosphate deacetylase; PFAM: amidohydrolase YP_005276302.1 PFAM: PTS system fructose subfamily IIA component; KEGG: ebd:ECBD_0606 PTS system fructose subfamily IIA component YP_005276303.1 PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: efe:EFER_4358 putative hexose/hexosamine family PTS permease IID component YP_005276304.1 PFAM: phosphotransferase system PTS sorbose-specific IIC subunit; KEGG: efe:EFER_4359 putative enzyme IIC component of PTS YP_005276305.1 TIGRFAM: PTS system, mannose/fructose/sorbose family, IIB subunit; KEGG: sfx:S3383 PTS system N-acetylgalactosamine-specific transporter subunit IIB; PFAM: PTS system sorbose subfamily IIB component YP_005276306.1 KEGG: eoi:ECO111_3954 tagatose 6-phosphate aldolase 1, KbaZ subunit; TIGRFAM: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit; PFAM: D-tagatose-bisphosphate aldolase class II accessory protein AgaZ YP_005276307.1 KEGG: efe:EFER_4362 DNA-binding transcriptional regulator AgaR; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_005276308.1 KEGG: eoh:ECO103_3875 hypothetical protein YP_005276309.1 KEGG: eoh:ECO103_3874 putative regulator PrlF YP_005276310.1 TIGRFAM: galactarate dehydratase; KEGG: eoh:ECO103_3873 (D)-galactarate dehydrogenase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein YP_005276311.1 KEGG: ebd:ECBD_0615 D-galactonate transporter; TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1 YP_005276312.1 TIGRFAM: 2-dehydro-3-deoxyglucarate aldolase; KEGG: sbo:SBO_2991 alpha-dehydro-beta-deoxy-D-glucarate aldolase; PFAM: HpcH/HpaI aldolase YP_005276313.1 TIGRFAM: 2-hydroxy-3-oxopropionate reductase; KEGG: sbo:SBO_2990 tartronate semialdehyde reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding YP_005276314.1 PFAM: glycerate kinase; manually curated; KEGG: eok:G2583_3846 hypothetical protein; TIGRFAM: glycerate kinase YP_005276315.1 KEGG: eoh:ECO103_3868 hypothetical protein YP_005276316.1 KEGG: eoh:ECO103_3867 hypothetical protein YP_005276317.1 manually curated; KEGG: sbo:SBO_2984 DNA-binding transcriptional activator TdcR YP_005276318.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sdy:SDY_3310 DNA-binding transcriptional activator TdcA YP_005276319.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: sdy:SDY_3309 threonine dehydratase YP_005276320.1 TIGRFAM: serine transporter; KEGG: sbc:SbBS512_E3241 threonine/serine transporter TdcC YP_005276321.1 KEGG: sbo:SBO_2980 propionate/acetate kinase; TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase YP_005276322.1 TIGRFAM: formate acetyltransferase; KEGG: ebd:ECBD_0626 formate acetyltransferase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical YP_005276323.1 KEGG: sbc:SbBS512_E3244 hypothetical protein; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP YP_005276324.1 TIGRFAM: L-serine dehydratase 1; KEGG: sbc:SbBS512_E3245 L-serine ammonia-lyase TdcG; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain YP_005276325.1 TIGRFAM: serine transporter; KEGG: ssn:SSON_3268 putative transport system permease protein YP_005276326.1 KEGG: eoh:ECO103_3857 hypothetical protein YP_005276327.1 KEGG: sdy:SDY_3299 hypothetical protein YP_005276328.1 PFAM: Pirin domain protein; KEGG: sbc:SbBS512_E3251 pirin family protein YP_005276329.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sbo:SBO_2972 putative transcriptional regulator LysR-type YP_005276330.1 PFAM: protein of unknown function DUF805; KEGG: eoh:ECO103_3853 putative inner membrane protein YP_005276331.1 PFAM: protein of unknown function DUF805; KEGG: sbc:SbBS512_E3258 putative inner membrane protein YhaH YP_005276332.1 KEGG: sbc:SbBS512_E3259 hypothetical protein; PFAM: Glutathione S-transferase domain YP_005276333.1 PFAM: DoxX family protein; KEGG: ssn:SSON_3260 hypothetical protein YP_005276334.1 KEGG: sbc:SbBS512_E3261 hypothetical protein YP_005276335.1 KEGG: sbc:SbBS512_E3262 hypothetical protein YP_005276336.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: sdy:SDY_3285 hypothetical protein YP_005276337.1 PFAM: protein of unknown function DUF1090; KEGG: sbc:SbBS512_E3264 hypothetical protein YP_005276338.1 KEGG: sbc:SbBS512_E3265 hypothetical protein YP_005276339.1 PFAM: SNARE associated Golgi protein; KEGG: sdy:SDY_3282 hypothetical protein YP_005276340.1 KEGG: sbo:SBO_2961 DNA-binding transcriptional repressor ExuR; PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH YP_005276341.1 KEGG: eoi:ECO111_3919 putative fimbrial protein YP_005276342.1 KEGG: eoh:ECO103_3841 putative fimbrial subunit YP_005276343.1 KEGG: eoj:ECO26_4198 putative outer membrane usher protein YP_005276344.1 PFAM: CblD family pilus biogenesis initiator protein; KEGG: eoh:ECO103_3839 putative minor pilin and initiator protein YP_005276345.1 manually curated; TIGRFAM: d-galactonate transporter; KEGG: ebr:ECB_02962 hexuronate transporter; PFAM: major facilitator superfamily MFS_1 YP_005276346.1 KEGG: eoh:ECO103_3837 glucuronate isomerase; PFAM: Glucuronate isomerase YP_005276347.1 KEGG: eoi:ECO111_3913 altronate hydrolase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein YP_005276348.1 KEGG: ssn:SSON_3243 hypothetical protein YP_005276349.1 PFAM: sodium:dicarboxylate symporter; KEGG: ssn:SSON_3242 serine/threonine transporter SstT YP_005276350.1 PFAM: Integral membrane protein TerC; KEGG: eoh:ECO103_3833 putative inner membrane protein YP_005276351.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: eoi:ECO111_3909 putative NAD(P)-binding dehydrogenase YP_005276352.1 PFAM: protein of unknown function DUF218; KEGG: eoi:ECO111_3908 putative thioredoxin-like protein YP_005276353.1 PFAM: protein of unknown function DUF45; KEGG: sdy:SDY_3268 hypothetical protein YP_005276354.1 PFAM: methyltransferase small; KEGG: eoh:ECO103_3829 putative methyltransferase small domain YP_005276355.1 KEGG: eoh:ECO103_3827 putative DNA-binding transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_005276356.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: eoh:ECO103_3826 2,4-dienoyl-CoA reductase, NADH and FMN-linked YP_005276357.1 PFAM: alpha-L-rhamnosidase; KEGG: eoh:ECO103_3825 putative glycosyl hydrolase YP_005276358.1 KEGG: ebd:ECBD_0663 hypothetical protein YP_005276359.1 PFAM: amino acid permease-associated region; KEGG: sbo:SBO_2937 putative oxidoreductase YP_005276360.1 PFAM: Conserved hypothetical protein CHP00022; KEGG: ssn:SSON_3216 cryptic beta-D-galactosidase subunit beta YP_005276361.1 PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 42 domain 5 loop region; KEGG: eoh:ECO103_3821 cryptic beta-D-galactosidase subunit alpha YP_005276362.1 KEGG: ebd:ECBD_0667 DNA-binding transcriptional repressor EbgR; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_005276363.1 PFAM: t-RNA-binding domain-containing protein; KEGG: sbo:SBO_2933 hypothetical protein YP_005276364.1 TIGRFAM: putrescine aminotransferase; KEGG: cko:CKO_04486 putrescine--2-oxoglutarate aminotransferase; PFAM: aminotransferase class-III YP_005276365.1 TIGRFAM: PAS sensor protein; PFAM: chemotaxis sensory transducer; PAS fold-3 domain protein; histidine kinase HAMP region domain protein; KEGG: ssn:SSON_3210 aerotaxis sensor receptor, flavoprotein; SMART: chemotaxis sensory transducer; PAC repeat-containing protein YP_005276366.1 PFAM: transcriptional regulator PadR family protein; KEGG: eoh:ECO103_3816 putative transcriptional regulator YP_005276367.1 PFAM: FAD-binding 9 siderophore-interacting domain protein; Siderophore-interacting protein; KEGG: sbc:SbBS512_E3506 siderophore-interacting protein YP_005276368.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: sbc:SbBS512_E3504 G/U mismatch-specific DNA glycosylase YP_005276369.1 KEGG: sbo:SBO_2925 RNA polymerase sigma factor RpoD; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 non-essential domain protein; sigma-70 1.1 domain protein; sigma-70 region 1.2; sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein YP_005276370.1 TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; TOPRIM domain-containing protein; DNA primase, DnaB-helicase binding domain; DNA primase DnaG DnaB-binding; KEGG: ssn:SSON_3203 DNA primase; SMART: DNA primase DnaG DnaB-binding; Toprim sub domain-containing protein YP_005276371.1 KEGG: pam:PANA_3388 RpsU; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21 YP_005276372.1 TIGRFAM: metalloendopeptidase, glycoprotease family; KEGG: sbc:SbBS512_E3498 putative DNA-binding/iron metalloprotein/AP endonuclease; PFAM: peptidase M22 glycoprotease YP_005276373.1 KEGG: eoh:ECO103_3743 putative tartrate:succinate antiporter; TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter YP_005276374.1 TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; KEGG: sfv:SFV_3102 L(+)-tartrate dehydratase subunit beta; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region YP_005276375.1 TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; KEGG: sbo:SBO_2919 tartrate dehydratase subunit alpha; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region YP_005276376.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebd:ECBD_0681 transcriptional activator TtdR YP_005276377.1 PFAM: protein of unknown function DUF205; KEGG: sdy:SDY_3242 putative glycerol-3-phosphate acyltransferase PlsY YP_005276378.1 TIGRFAM: dihydroneopterin aldolase; KEGG: sdy:SDY_3241 bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase; PFAM: dihydroneopterin aldolase YP_005276379.1 KEGG: sbc:SbBS512_E3488 undecaprenyl pyrophosphate phosphatase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA YP_005276380.1 PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: sbc:SbBS512_E3487 multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase YP_005276381.1 SMART: SH3 domain protein; KEGG: eoh:ECO103_3735 putative signal transduction protein YP_005276382.1 PFAM: adenylate cyclase; CHAD domain containing protein; KEGG: eoi:ECO111_3877 putative adenylate cyclase YP_005276383.1 KEGG: eoi:ECO111_3876 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase; PFAM: glutamate-ammonia ligase adenylyltransferase; GlnD PII-uridylyltransferase YP_005276384.1 KEGG: ebd:ECBD_0689 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; TIGRFAM: rfaE bifunctional protein; cytidyltransferase-related domain protein; PFAM: PfkB domain protein; cytidylyltransferase YP_005276385.1 manually curated; KEGG: eok:G2583_3774 hypothetical protein YP_005276386.1 KEGG: ssn:SSON_3188 hypothetical protein; PFAM: band 7 protein; SMART: band 7 protein YP_005276387.1 PFAM: protein of unknown function DUF1449; KEGG: eoh:ECO103_3727 putative inner membrane protein YP_005276388.1 PFAM: Glycogen synthesis protein; KEGG: ssn:SSON_3186 glycogen synthesis protein GlgS YP_005276389.1 KEGG: ssn:SSON_3184 hypothetical protein YP_005276390.1 PFAM: Pili assembly chaperone, N-terminal; KEGG: ssn:SSON_3183 hypothetical protein YP_005276391.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: eoh:ECO103_3723 putative outer membrane usher protein YP_005276392.1 PFAM: Fimbrial protein domain-containing protein; KEGG: eoh:ECO103_3722 putative fimbrial protein YP_005276393.1 PFAM: protein of unknown function DUF526; KEGG: sbc:SbBS512_E3479 hypothetical protein YP_005276394.1 KEGG: sdy:SDY_3226 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase YP_005276395.1 KEGG: sbc:SbBS512_E3475 hypothetical protein YP_005276396.1 PFAM: zinc/iron permease; KEGG: ssn:SSON_3177 zinc transporter ZupT YP_005276397.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: eoh:ECO103_3717 hypothetical protein YP_005276398.1 KEGG: sbc:SbBS512_E3470 glutathionylspermidine synthase family protein; PFAM: glutathionylspermidine synthase YP_005276399.1 PFAM: protein of unknown function DUF1190; KEGG: ssn:SSON_3174 hypothetical protein YP_005276400.1 KEGG: ssn:SSON_3173 outer membrane channel protein; TIGRFAM: type I secretion outer membrane protein, TolC family; PFAM: outer membrane efflux protein YP_005276401.1 KEGG: sdy:SDY_3206 ADP-ribose pyrophosphatase NudF; PFAM: NUDIX hydrolase YP_005276402.1 PFAM: protein of unknown function DUF1249; KEGG: sbc:SbBS512_E3466 hypothetical protein YP_005276403.1 PFAM: Calcineurin phosphoesterase domain protein; metallophosphoesterase; KEGG: sdy:SDY_3208 cyclic 3',5'-adenosine monophosphate phosphodiesterase YP_005276404.1 PFAM: protein of unknown function UPF0227; KEGG: sdy:SDY_3209 esterase YqiA YP_005276405.1 SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA topoisomerase IV, B subunit; KEGG: sbo:SBO_2888 DNA topoisomerase IV subunit B; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; DNA gyrase subunit B domain protein YP_005276406.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: sbc:SbBS512_E3462 quinol monooxygenase YgiN YP_005276407.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: sbc:SbBS512_E3461 modulator of drug activity B YP_005276408.1 manually curated; KEGG: eoh:ECO103_3705 hypothetical protein YP_005276409.1 KEGG: eoh:ECO103_3704 sensor protein QseC; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_005276410.1 KEGG: eok:G2583_3746 DNA-binding response regulator in two-component regulatory system with QseC; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_005276411.1 PFAM: protein of unknown function DUF388, OB-fold; KEGG: sdy:SDY_3215 hypothetical protein YP_005276412.1 PFAM: transcription activator effector binding; KEGG: ssn:SSON_3162 hypothetical protein YP_005276413.1 SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA topoisomerase IV, A subunit; KEGG: sfv:SFV_3068 DNA topoisomerase IV subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller YP_005276414.1 SMART: phospholipid/glycerol acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; KEGG: sbc:SbBS512_E3455 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase YP_005276415.1 PFAM: multicopper oxidase type 3; multicopper oxidase type 2; KEGG: sbc:SbBS512_E3454 repressor protein for FtsI YP_005276416.1 KEGG: eoh:ECO103_3697 hypothetical protein; PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_005276417.1 KEGG: sbc:SbBS512_E3443 putative outer membrane lipoprotein YP_005276418.1 KEGG: eoi:ECO111_3840 hypothetical protein YP_005276419.1 KEGG: ebd:ECBD_0728 2,5-diketo-D-gluconate reductase A; PFAM: aldo/keto reductase YP_005276420.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: sfv:SFV_3060 putative oxidoreductase YP_005276421.1 KEGG: eoi:ECO111_3837 putative DNA-binding transcriptional regulator, AraC-type; PFAM: AraC-type transcriptional regulator domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_005276422.1 PFAM: SNARE associated Golgi protein; KEGG: ssn:SSON_3152 hypothetical protein YP_005276423.1 KEGG: eoh:ECO103_3690 cystathionine beta-lyase; TIGRFAM: cystathionine beta-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_005276424.1 KEGG: sdy:SDY_3067 biopolymer transport protein ExbB; TIGRFAM: tonB-system energizer ExbB; PFAM: MotA/TolQ/ExbB proton channel YP_005276425.1 KEGG: sbc:SbBS512_E3433 biopolymer transport protein ExbD; TIGRFAM: TonB system transport protein ExbD; PFAM: Biopolymer transport protein ExbD/TolR YP_005276426.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sbc:SbBS512_E3432 oxidoreductase YP_005276427.1 PFAM: Uncharacterised protein family UPF0114; KEGG: sbc:SbBS512_E3431 hypothetical protein YP_005276428.1 PFAM: aldo/keto reductase; KEGG: eoh:ECO103_3685 aldo-keto reductase YP_005276429.1 KEGG: eoh:ECO103_3684 putative hydrolase YP_005276430.1 KEGG: sdy:SDY_3075 hypothetical protein YP_005276431.1 TIGRFAM: hydrogenase (NiFe) small subunit HydA; KEGG: sbc:SbBS512_E3424 hydrogenase 2 small subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit YP_005276432.1 KEGG: sbo:SBO_2867 hydrogenase 2 protein HybA YP_005276433.1 PFAM: Polysulphide reductase NrfD; KEGG: sdy:SDY_3078 putative hydrogenase 2 b cytochrome subunit YP_005276434.1 KEGG: sbc:SbBS512_E3421 hydrogenase 2 large subunit; PFAM: nickel-dependent hydrogenase large subunit YP_005276435.1 KEGG: eok:G2583_3719 putative maturation element for hydrogenase 2; TIGRFAM: hydrogenase expression/formation protein; hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein YP_005276436.1 KEGG: sbc:SbBS512_E3419 hydrogenase 2-specific chaperone YP_005276437.1 KEGG: sbc:SbBS512_E3418 hydrogenase nickel incorporation protein HybF; TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis HypA YP_005276438.1 KEGG: sdy:SDY_3083 hydrogenase 2 accessory protein HypG; TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC) YP_005276439.1 PFAM: Glutathione S-transferase domain; KEGG: eoh:ECO103_3673 putative glutathione S-transferase YghU YP_005276440.1 KEGG: sdy:SDY_3085 bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase; PFAM: CHAP domain containing protein; glutathionylspermidine synthase YP_005276441.1 PFAM: phosphate transporter; KEGG: sdy:SDY_3086 low-affinity phosphate transport YP_005276442.1 KEGG: ebd:ECBD_0752 hypothetical protein YP_005276443.1 KEGG: ebd:ECBD_0753 uncharacterized ATP-binding protein YghS YP_005276444.1 KEGG: ebd:ECBD_0754 hypothetical protein YP_005276445.1 PFAM: polysaccharide biosynthesis protein; KEGG: eoi:ECO111_3812 putative inner membrane protein YP_005276446.1 KEGG: eoi:ECO111_3811 hypothetical protein YP_005276447.1 PFAM: Conserved hypothetical protein, YtfJ; KEGG: sfx:S3229 hypothetical protein YP_005276448.1 PFAM: permease YjgP/YjgQ family protein; KEGG: eok:G2583_3706 permease YjgP/YjgQ family protein precursor YP_005276449.1 PFAM: permease YjgP/YjgQ family protein; KEGG: eoh:ECO103_3663 hypothetical protein YP_005276450.1 KEGG: eoh:ECO103_3662 hypothetical protein; PFAM: aminotransferase class I and II YP_005276451.1 PFAM: phosphopantetheine-binding; KEGG: sfx:S3224 hypothetical protein YP_005276452.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: eoi:ECO111_3805 hypothetical protein YP_005276453.1 PFAM: AMP-dependent synthetase and ligase; KEGG: eoh:ECO103_3659 acyl-CoA synthetase YP_005276454.1 KEGG: eoi:ECO111_3803 putative DNA-binding transcriptional regulator YP_005276455.1 KEGG: ebd:ECBD_0758 DNA-binding transcriptional regulator GlcC; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_005276456.1 KEGG: ebd:ECBD_0759 glycolate oxidase subunit GlcD; TIGRFAM: glycolate oxidase, subunit GlcD; PFAM: FAD linked oxidase domain protein YP_005276457.1 PFAM: FAD linked oxidase domain protein; KEGG: eoi:ECO111_3800 glycolate oxidase FAD binding subunit YP_005276458.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: eoi:ECO111_3799 glycolate oxidase iron-sulfur subunit YP_005276459.1 PFAM: protein of unknown function DUF336; KEGG: sfv:SFV_3032 hypothetical protein YP_005276460.1 TIGRFAM: malate synthase G; KEGG: ebd:ECBD_0763 malate synthase G; PFAM: Malate synthase family protein YP_005276461.1 KEGG: eoh:ECO103_3651 glycolate transporter; TIGRFAM: L-lactate transport; PFAM: L-lactate permease YP_005276462.1 KEGG: eoi:ECO111_3795 putative lipoprotein AcfD homolog precursor YP_005276463.1 PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV; KEGG: eoi:ECO111_3794 bifunctional prepilin leader peptidase/methylase YP_005276464.1 KEGG: ebd:ECBD_0767 uncharacterized lipoprotein YghG YP_005276465.1 KEGG: eok:G2583_3687 general secretion pathway protein C; manually curated; TIGRFAM: general secretion pathway protein C YP_005276466.1 KEGG: eoi:ECO111_3791 putative type II secretion protein GspD; TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein YP_005276467.1 TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; KEGG: eoi:ECO111_3790 putative type II secretion protein GspE; SMART: AAA ATPase YP_005276468.1 KEGG: eoi:ECO111_3789 putative type II secretion protein GspF; TIGRFAM: general secretion pathway protein F; PFAM: Type II secretion system F domain YP_005276469.1 KEGG: ebr:ECB_02835 hypothetical type II secretion protein GspG; TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G YP_005276470.1 TIGRFAM: general secretion pathway protein H; KEGG: eok:G2583_3682 general secretion pathway protein H YP_005276471.1 KEGG: eoi:ECO111_3786 putative type II secretion protein GspI; TIGRFAM: general secretion pathway protein I; PFAM: type II secretion system protein I/J YP_005276472.1 TIGRFAM: general secretion pathway protein J; KEGG: sbc:SbBS512_E3406 general secretion pathway protein GspJ YP_005276473.1 KEGG: eoi:ECO111_3784 putative type II secretion protein GspK YP_005276474.1 KEGG: sbc:SbBS512_E3404 GspL-like protein; TIGRFAM: general secretion pathway protein L; PFAM: General secretion pathway L YP_005276475.1 PFAM: General secretion pathway M protein; KEGG: sbc:SbBS512_E3403 putative general secretion pathway protein YghD YP_005276476.1 PFAM: protein of unknown function DUF554; KEGG: ebr:ECB_02796 predicted inner membrane protein YP_005276477.1 manually curated; KEGG: eok:G2583_3624 ornithine decarboxylase isozyme; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein YP_005276478.1 TIGRFAM: nucleoside transporter; KEGG: sbc:SbBS512_E3397 nucleoside permease NupG YP_005276479.1 PFAM: Lytic transglycosylase catalytic; KEGG: sbc:SbBS512_E3396 murein transglycosylase C YP_005276480.1 PFAM: Fe(II) trafficking protein YggX; KEGG: sdy:SDY_3110 hypothetical protein YP_005276481.1 TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; KEGG: eoh:ECO103_3544 adenine DNA glycosylase; SMART: HhH-GPD family protein; iron-sulfur cluster loop YP_005276482.1 KEGG: sbc:SbBS512_E3393 tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: methyltransferase YP_005276483.1 PFAM: protein of unknown function DUF469; KEGG: sdy:SDY_3113 hypothetical protein YP_005276484.1 KEGG: sdy:SDY_3114 hypothetical protein YP_005276485.1 KEGG: sbc:SbBS512_E3389 L-asparaginase II; TIGRFAM: L-asparaginase, type II; PFAM: Asparaginase/glutaminase YP_005276486.1 PFAM: protein of unknown function DUF1202; KEGG: sbc:SbBS512_E3388 hypothetical protein YP_005276487.1 TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; KEGG: eoh:ECO103_3535 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB YP_005276488.1 KEGG: eoi:ECO111_3702 putative deoxyribonucleotide triphosphate pyrophosphatase; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein YP_005276489.1 PFAM: protein of unknown function DUF167; KEGG: sfv:SFV_3007 hypothetical protein YP_005276490.1 PFAM: protein of unknown function YGGT; KEGG: sdy:SDY_3120 putative resistance protein YP_005276491.1 PFAM: alanine racemase domain protein; KEGG: sdy:SDY_3122 hypothetical protein YP_005276492.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: eoh:ECO103_3530 putative transporter; SMART: AAA ATPase YP_005276493.1 KEGG: sbc:SbBS512_E3381 Holliday junction resolvase-like protein; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold YP_005276494.1 PFAM: protein of unknown function DUF179; KEGG: ebd:ECBD_0792 hypothetical protein YP_005276495.1 TIGRFAM: glutathione synthetase; KEGG: ebd:ECBD_0793 glutathione synthetase; PFAM: glutathione synthetase ATP-binding; glutathione synthetase domain protein YP_005276496.1 PFAM: protein of unknown function DUF558; KEGG: sbc:SbBS512_E3378 16S ribosomal RNA methyltransferase RsmE YP_005276497.1 KEGG: sbc:SbBS512_E3377 endonuclease I; PFAM: Endonuclease I YP_005276498.1 KEGG: eok:G2583_3603 hypothetical protein; manually curated; SMART: protein of unknown function SprT YP_005276499.1 TIGRFAM: sugar transporter; KEGG: sdy:SDY_3129 galactose-proton symport of transport system YP_005276500.1 TIGRFAM: S-adenosylmethionine synthetase; KEGG: sdy:SDY_3130 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase YP_005276501.1 KEGG: eok:G2583_3600 hypothetical protein YP_005276502.1 KEGG: sdy:SDY_3134 arginine decarboxylase; TIGRFAM: arginine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2 YP_005276503.1 KEGG: eoi:ECO111_3685 putative lipoprotein YP_005276504.1 KEGG: sbo:SBO_3052 agmatinase; TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase YP_005276505.1 PFAM: peptidase M48 Ste24p; KEGG: eoi:ECO111_3676 putative peptidase YP_005276506.1 KEGG: ebd:ECBD_0803 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain-containing protein; Transketolase central region YP_005276507.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: ebd:ECBD_0805 putative mannitol phosphotransferase subunit EIIA YP_005276508.1 TIGRFAM: PTS system, mannitol-specific IIC subunit; KEGG: sbc:SbBS512_E3365 PTS system, mannitol-specific cryptic EIICB component; PFAM: phosphotransferase system EIIC; phosphotransferase system lactose/cellobiose-specific IIB subunit YP_005276509.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: eoh:ECO103_3511 putative dehydrogenase YP_005276510.1 TIGRFAM: fructose-1,6-bisphosphatase, class II; KEGG: sfv:SFV_2982 fructose-1,6-bisphosphatase II-like protein; PFAM: GlpX family protein YP_005276511.1 PFAM: Mannitol repressor; KEGG: eoh:ECO103_3509 putative DNA-binding transcriptional regulator YP_005276512.1 KEGG: ssn:SSON_3085 putative fructose transport system kinase YP_005276513.1 KEGG: sfx:S3118 putative ATP-binding protein of ABC transport system; PFAM: ABC transporter related; SMART: AAA ATPase YP_005276514.1 KEGG: sbc:SbBS512_E3356 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_005276515.1 KEGG: eoh:ECO103_3505 putative lipoprotein YP_005276516.1 KEGG: sbc:SbBS512_E3354 hypothetical protein YP_005276517.1 PFAM: protein of unknown function DUF296; KEGG: sdy:SDY_3154 hypothetical protein YP_005276518.1 TIGRFAM: D-erythrose-4-phosphate dehydrogenase; KEGG: sbc:SbBS512_E3352 erythrose 4-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YP_005276519.1 KEGG: sbo:SBO_3067 phosphoglycerate kinase; PFAM: phosphoglycerate kinase YP_005276520.1 KEGG: sdy:SDY_3157 fructose-bisphosphate aldolase; TIGRFAM: fructose-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II YP_005276521.1 PFAM: MscS Mechanosensitive ion channel; Conserved TM helix repeat-containing protein; KEGG: sbc:SbBS512_E3349 mechanosensitive channel MscS YP_005276522.1 KEGG: sdy:SDY_3159 arginine exporter protein; TIGRFAM: L-lysine exporter; PFAM: Lysine exporter protein (LYSE/YGGA) YP_005276523.1 PFAM: protein of unknown function DUF541; KEGG: sdy:SDY_3160 hypothetical protein YP_005276524.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ebd:ECBD_0817 transcriptional regulator, LysR family YP_005276525.1 TIGRFAM: succinate CoA transferase; KEGG: ssn:SSON_3071 putative coenzyme A transferase; PFAM: acetyl-CoA hydrolase/transferase YP_005276526.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sbc:SbBS512_E3341 methylmalonyl-CoA decarboxylase YP_005276527.1 KEGG: ebd:ECBD_0820 arginine/ornithine transport system ATPase; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein YP_005276528.1 TIGRFAM: methylmalonyl-CoA mutase, large subunit; KEGG: eok:G2583_3571 methylmalonyl-CoA mutase; PFAM: methylmalonyl-CoA mutase; cobalamin B12-binding domain protein YP_005276529.1 KEGG: sdy:SDY_3165 chromosome replication initiation inhibitor protein; TIGRFAM: transcriptional regulator, ArgP family; PFAM: regulatory protein LysR; LysR substrate-binding YP_005276530.1 PFAM: LysR substrate-binding; KEGG: ebd:ECBD_0823 uncharacterized protein YqfE YP_005276531.1 TIGRFAM: ribose 5-phosphate isomerase; KEGG: sdy:SDY_3168 ribose-5-phosphate isomerase A; PFAM: Ribose 5-phosphate isomerase YP_005276532.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein; KEGG: sbo:SBO_3080 D-3-phosphoglycerate dehydrogenase YP_005276533.1 KEGG: eok:G2583_3564 putative ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase YP_005276534.1 PFAM: protein of unknown function DUF710; KEGG: sbc:SbBS512_E3331 Z-ring-associated protein YP_005276535.1 KEGG: sbc:SbBS512_E3330 hypothetical protein; TIGRFAM: yecA family protein; PFAM: Uncharacterised protein family UPF0149 (YgfB) YP_005276536.1 PFAM: peptidase M24; peptidase M24B X-Pro dipeptidase/aminopeptidase domain protein; KEGG: ebd:ECBD_0829 proline aminopeptidase P II YP_005276537.1 KEGG: eoi:ECO111_3645 2-octaprenyl-6-methoxyphenyl hydroxylase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; 2-polyprenyl-6-methoxyphenol 4-hydroxylase; PFAM: FAD dependent oxidoreductase YP_005276538.1 KEGG: ssn:SSON_3059 hypothetical protein; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase YP_005276539.1 KEGG: sbo:SBO_3087 glycine cleavage system aminomethyltransferase T; TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel YP_005276540.1 KEGG: sbc:SbBS512_E3325 glycine cleavage system protein H; TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein YP_005276541.1 KEGG: eoh:ECO103_3479 glycine dehydrogenase; TIGRFAM: glycine dehydrogenase; PFAM: Glycine cleavage system P-protein-like YP_005276542.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: eoi:ECO111_3640 hypothetical protein YP_005276543.1 PFAM: glycoside hydrolase family 1; KEGG: eoi:ECO111_3639 6-phospho-beta-glucosidase A YP_005276544.1 PFAM: protein of unknown function DUF437; KEGG: ssn:SSON_3053 hypothetical protein YP_005276545.1 KEGG: sbc:SbBS512_E3320 channel protein, hemolysin III family; TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein YP_005276546.1 KEGG: sfv:SFV_2946 putative global regulator; TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase) YP_005276547.1 PFAM: protein of unknown function DUF339; KEGG: sdy:SDY_3185 hypothetical protein YP_005276548.1 PFAM: protein of unknown function DUF1434; KEGG: eoh:ECO103_3471 hypothetical protein YP_005276549.1 KEGG: sdy:SDY_3187 flavodoxin FldB; TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase YP_005276550.1 KEGG: sdy:SDY_3188 site-specific tyrosine recombinase XerD; TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein YP_005276551.1 PFAM: Disulphide bond isomerase, DsbC/G-like; KEGG: eok:G2583_3546 thiol:disulfide interchange protein DsbC precursor YP_005276552.1 KEGG: sbo:SBO_3100 ssDNA exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1 YP_005276553.1 manually curated; KEGG: sfx:S3076 peptide chain release factor 2 YP_005276554.1 TIGRFAM: lysyl-tRNA synthetase; KEGG: sbc:SbBS512_E3309 lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type YP_005276555.1 TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1; KEGG: sfv:SFV_2937 isopentenyl-diphosphate delta-isomerase; PFAM: NUDIX hydrolase YP_005276556.1 KEGG: eoh:ECO103_3463 hypothetical protein YP_005276557.1 manually curated; TIGRFAM: xanthine permease; uracil-xanthine permease; KEGG: eok:G2583_3541 putative xanthine permease; PFAM: Xanthine/uracil/vitamin C permease YP_005276558.1 KEGG: eoh:ECO103_3461 putative oxidoreductase Fe-S binding subunit; TIGRFAM: glutamate synthase, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_005276559.1 KEGG: ssn:SSON_3038 putative oxidoreductase, Fe-S subunit YP_005276560.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: ebd:ECBD_0853 xanthine/uracil/vitamin C permease YP_005276561.1 KEGG: eoh:ECO103_3458 guanine deaminase; TIGRFAM: guanine deaminase; PFAM: amidohydrolase YP_005276562.1 KEGG: eoh:ECO103_3457 putative transporter; TIGRFAM: uracil-xanthine permease; xanthine permease; PFAM: Xanthine/uracil/vitamin C permease YP_005276563.1 KEGG: ebw:BWG_2607 putative selenate reductase subunit YgfN; TIGRFAM: selenate reductase, molybdenum-binding subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; [2Fe-2S]-binding domain-containing protein YP_005276564.1 KEGG: ssn:SSON_3034 putative selenate reductase subunit YgfM; TIGRFAM: selenate reductase, FAD-binding subunit; PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein YP_005276565.1 KEGG: eoi:ECO111_3617 putative chlorohydrolase/aminohydrolase; TIGRFAM: selenium metabolism protein SsnA; PFAM: amidohydrolase YP_005276566.1 KEGG: eoh:ECO103_3453 putative selenate reductase subunit YgfK; TIGRFAM: selenate reductase YgfK; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_005276567.1 TIGRFAM: molybdenum hydroxylase accessory protein, YgfJ family; KEGG: eoh:ECO103_3452 hypothetical protein YP_005276568.1 KEGG: eoh:ECO103_3451 hypothetical protein YP_005276569.1 KEGG: eoi:ECO111_3613 hypothetical protein; TIGRFAM: selenium-dependent molybdenum hydroxylase system protein, YqeB family; PFAM: protein of unknown function DUF182; biotin/lipoyl attachment domain-containing protein YP_005276570.1 TIGRFAM: carbamate kinase; KEGG: eoh:ECO103_3449 carbamate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_005276571.1 KEGG: sbo:SBO_3111 phenylhydantoinase; TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase YP_005276572.1 KEGG: sbo:SBO_3112 peptidase; TIGRFAM: M20/DapE family protein YgeY; PFAM: peptidase M20; peptidase dimerisation domain protein YP_005276573.1 KEGG: sbo:SBO_3113 diaminopropionate ammonia-lyase; TIGRFAM: diaminopropionate ammonia-lyase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_005276574.1 KEGG: eoh:ECO103_3445 aspartate/ornithine carbamoyltransferase family protein; TIGRFAM: carbamoyltransferase YgeW; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region YP_005276575.1 KEGG: eoj:ECO26_3958 putative DNA-binding transcriptional regulator; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase; PAS domain containing protein YP_005276576.1 PFAM: [2Fe-2S]-binding domain-containing protein; ferredoxin; KEGG: sbo:SBO_3117 xanthine dehydrogenase subunit XdhC YP_005276577.1 PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: sfv:SFV_2932 xanthine dehydrogenase subunit XdhB YP_005276578.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: eoi:ECO111_3604 xanthine dehydrogenase subunit XdhA YP_005276579.1 KEGG: sbc:SbBS512_E3304 peptidase, M23B family; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM YP_005276580.1 KEGG: eoh:ECO103_3433 hypothetical protein YP_005276581.1 KEGG: eoh:ECO103_3430 surface presentation of antigens protein SpaP; TIGRFAM: Yop virulence translocation R; PFAM: type III secretion system inner membrane P protein YP_005276582.1 KEGG: eoi:ECO111_3596 type III secretion protein EpaR; TIGRFAM: type III secretion protein SpaR/YscT/HrcT; PFAM: type III secretion system inner membrane R protein YP_005276583.1 PFAM: type III secretion exporter; KEGG: etw:ECSP_3819 surface presentation of antigens protein SpaS YP_005276584.1 PFAM: type III secretion exporter; KEGG: etw:ECSP_3819 surface presentation of antigens protein SpaS YP_005276585.1 PFAM: InvH outer membrane lipoprotein; KEGG: set:SEN2741 cell adherance/invasion protein YP_005276586.1 PFAM: regulatory protein LuxR; KEGG: eoj:ECO26_3936 putative transcriptional regulator YP_005276587.1 KEGG: eoh:ECO103_3424 type III secretion protein EprH; TIGRFAM: type III secretion system protein PrgH/EprH; PFAM: Type III secretion system, PrgH/EprH-like YP_005276588.1 KEGG: eoj:ECO26_3930 hypothetical protein YP_005276589.1 KEGG: etw:ECSP_3808 predicted lytic transglycosylase; manually curated; PFAM: Lytic transglycosylase catalytic YP_005276590.1 KEGG: eoh:ECO103_3414 hypothetical protein YP_005276591.1 PFAM: transcriptional regulator domain-containing protein; KEGG: ebw:BWG_2587 transcriptional regulator YP_005276592.1 PFAM: Tetratricopeptide TPR_3 repeat-containing protein; KEGG: ssn:SSON_3011 hypothetical protein YP_005276593.1 KEGG: eoi:ECO111_3579 hypothetical protein YP_005276594.1 KEGG: eoj:ECO26_3922 hypothetical protein YP_005276595.1 KEGG: fbc:FB2170_06780 hypothetical protein YP_005276596.1 KEGG: ssn:SSON_3009 hypothetical protein YP_005276597.1 KEGG: eoi:ECO111_3576 putative transcriptional regulator; manually curated; PFAM: transcriptional regulator domain-containing protein YP_005276599.1 KEGG: eok:G2583_3503 hypothetical protein YP_005276600.1 KEGG: ebd:ECBD_0877 serine transporter; TIGRFAM: serine transporter; PFAM: Amino acid transporter transmembrane YP_005276601.1 TIGRFAM: acetyl-CoA acetyltransferase; KEGG: ebd:ECBD_0878 acetyl-CoA acetyltransferase; PFAM: Thiolase-like YP_005276602.1 KEGG: eoh:ECO103_3403 5-keto-4-deoxyuronate isomerase; PFAM: KduI/IolB isomerase YP_005276603.1 KEGG: ebr:ECB_02690 2-deoxy-D-gluconate 3-dehydrogenase; TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR YP_005276604.1 TIGRFAM: sugar transporter; KEGG: ssn:SSON_3001 low-affinity L-arabinose transport system proton symport protein YP_005276605.1 KEGG: sbc:SbBS512_E3023 putative racemase; TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase YP_005276606.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sdy:SDY_3056 DNA-binding transcriptional regulator LysR YP_005276607.1 KEGG: ebd:ECBD_0886 diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2 YP_005276608.1 KEGG: sbc:SbBS512_E3025 DNA-binding transcriptional regulator GalR; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_005276609.1 KEGG: ssn:SSON_2996 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; PFAM: AMP-dependent synthetase and ligase; phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_005276610.1 PFAM: major facilitator superfamily MFS_1; KEGG: ebd:ECBD_0889 lysophospholipid transporter LplT YP_005276611.1 PFAM: aldo/keto reductase; KEGG: sfv:SFV_2912 putative aldo-keto reductase YP_005276612.1 PFAM: protein of unknown function DUF903; KEGG: sdy:SDY_3050 hypothetical protein YP_005276613.1 PFAM: Integral membrane protein TerC; KEGG: sdy:SDY_3049 putative transport protein YP_005276614.1 KEGG: sdy:SDY_3048 DNA mismatch repair protein; TIGRFAM: DNA mismatch repair endonuclease mutH; PFAM: DNA mismatch repair protein MutH, conserved region YP_005276615.1 KEGG: ebd:ECBD_0894 hypothetical protein YP_005276616.1 PFAM: NUDIX hydrolase; KEGG: sdy:SDY_3047 dinucleoside polyphosphate hydrolase YP_005276617.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; GAF domain protein; PEP-utilising protein mobile region; KEGG: ssn:SSON_2986 fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain; SMART: GAF domain protein YP_005276618.1 KEGG: sdy:SDY_3045 prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase YP_005276619.1 TIGRFAM: thymidylate synthase; KEGG: ssn:SSON_2984 thymidylate synthase; PFAM: thymidylate synthase YP_005276620.1 KEGG: sdy:SDY_3043 hypothetical protein YP_005276621.1 KEGG: ssn:SSON_2982 hypothetical protein YP_005276622.1 PFAM: Protein of unknown function DUF2509; KEGG: eoi:ECO111_3552 hypothetical protein YP_005276623.1 KEGG: ssn:SSON_2980 hypothetical protein YP_005276624.1 KEGG: ebd:ECBD_0903 exonuclease V subunit gamma; TIGRFAM: exodeoxyribonuclease V, gamma subunit YP_005276625.1 PFAM: peptidase M16 domain protein; KEGG: eok:G2583_3475 protease III YP_005276626.1 TIGRFAM: exodeoxyribonuclease V, beta subunit; KEGG: eoj:ECO26_3892 exonuclease V subunit beta; PFAM: UvrD/REP helicase YP_005276627.1 TIGRFAM: exodeoxyribonuclease V, alpha subunit; KEGG: eoh:ECO103_3378 exonuclease V subunit alpha; SMART: AAA ATPase YP_005276628.1 TIGRFAM: amino-acid N-acetyltransferase; KEGG: sbo:SBO_2708 N-acetylglutamate synthase; PFAM: aspartate/glutamate/uridylate kinase; GCN5-related N-acetyltransferase YP_005276629.1 KEGG: sbc:SbBS512_E3045 N-acetylmuramoyl-L-alanine amidase AmiC; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin YP_005276630.1 KEGG: mag:amb0993 transcriptional regulatory protein YP_005276631.1 PFAM: ImpA-like; ImpA domain protein; KEGG: eoh:ECO103_3375 hypothetical protein YP_005276632.1 KEGG: eoh:ECO103_3374 hypothetical protein; TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein YP_005276633.1 TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: eoh:ECO103_3373 hypothetical protein YP_005276634.1 KEGG: eoh:ECO103_3372 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305 YP_005276635.1 KEGG: eoh:ECO103_3371 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879 YP_005276636.1 KEGG: cbe:Cbei_1210 sporulation protein YlmC/YmxH YP_005276637.1 PFAM: transposase IS3/IS911 family protein; KEGG: eoh:ECO103_3642 putative IS602 transposase OrfA YP_005276638.1 KEGG: eoh:ECO103_3369 hypothetical protein; TIGRFAM: type VI secretion-associated protein, VC_A0119 family; PFAM: ImpA domain protein YP_005276639.1 KEGG: ypy:YPK_0623 hypothetical protein YP_005276640.1 KEGG: eoh:ECO103_3370 hypothetical protein YP_005276641.1 KEGG: eoh:ECO103_3369 hypothetical protein; TIGRFAM: type VI secretion-associated protein, VC_A0119 family; PFAM: ImpA domain protein YP_005276642.1 PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: eoh:ECO103_3368 hypothetical protein YP_005276643.1 KEGG: eoh:ECO103_3367 hypothetical protein YP_005276644.1 KEGG: eoh:ECO103_3366 hypothetical protein YP_005276645.1 KEGG: eoh:ECO103_3364 hypothetical protein; TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein; PFAM: Protein of unknown function DUF2345 YP_005276646.1 KEGG: pmm:PMM1081 4-alpha-glucanotransferase YP_005276647.1 KEGG: abm:p2ABSDF0021 hypothetical protein YP_005276648.1 KEGG: eoh:ECO103_3364 hypothetical protein; TIGRFAM: Rhs element Vgr protein; type VI secretion system Vgr family protein; PFAM: Protein of unknown function DUF2345 YP_005276649.1 TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: eoh:ECO103_3363 putative ATP-dependent Clp proteinase ATP-binding chain; SMART: AAA ATPase YP_005276650.1 KEGG: eoh:ECO103_3362 Hcp-like protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796 YP_005276651.1 PFAM: OmpA/MotB domain protein; KEGG: eoh:ECO103_3361 putative outer membrane lipoprotein YP_005276652.1 KEGG: eoh:ECO103_3360 hypothetical protein; TIGRFAM: type IV / VI secretion system protein, DotU family; PFAM: Type IV / VI secretion system, DotU YP_005276653.1 KEGG: eoh:ECO103_3359 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876 YP_005276654.1 KEGG: eoh:ECO103_3358 hypothetical protein; TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877 YP_005276655.1 KEGG: eoh:ECO103_3357 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: Uncharacterised conserved protein UCP028301 YP_005276656.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: ssn:SSON_2969 putative enzyme YP_005276657.1 KEGG: ssn:SSON_2968 hypothetical protein; TIGRFAM: cysteine desulfurase, sulfur acceptor subunit CsdE; PFAM: Fe-S metabolism associated SufE YP_005276658.1 PFAM: aminotransferase class V; KEGG: ssn:SSON_2967 cysteine sulfinate desulfinase YP_005276659.1 PFAM: protein of unknown function DUF903; KEGG: sdy:SDY_3027 hypothetical protein YP_005276660.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sbc:SbBS512_E3062 DNA-binding transcriptional activator GcvA YP_005276661.1 PFAM: protein of unknown function DUF423; KEGG: sdy:SDY_3025 hypothetical protein YP_005276662.1 PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: ebd:ECBD_0916 putative RNA 2'-O-ribose methyltransferase YP_005276663.1 KEGG: ssn:SSON_2962 DNA-binding transcriptional activator FucR; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_005276664.1 PFAM: RbsD or FucU transport; KEGG: sdy:SDY_3022 protein of fucose operon YP_005276665.1 manually curated; TIGRFAM: L-fuculokinase; KEGG: eoi:ECO111_3528 L-fuculokinase; PFAM: Carbohydrate kinase, FGGY-like YP_005276666.1 TIGRFAM: L-fucose isomerase; KEGG: sfv:SFV_2881 L-fucose isomerase; PFAM: L-fucose isomerase-like-like; L-fucose isomerase _1 domain protein; L-fucose isomerase _2 domain protein YP_005276667.1 KEGG: eoh:ECO103_3344 L-fucose transporter; TIGRFAM: L-fucose transporter; PFAM: major facilitator superfamily MFS_1 YP_005276668.1 KEGG: eok:G2583_3453 L-fuculose phosphate aldolase; TIGRFAM: L-fuculose phosphate aldolase; PFAM: class II aldolase/adducin family protein YP_005276669.1 KEGG: eok:G2583_3452 lactaldehyde reductase; TIGRFAM: lactaldehyde reductase; PFAM: iron-containing alcohol dehydrogenase YP_005276670.1 KEGG: sdy:SDY_3015 exonuclease IX; PFAM: 5'-3' exonuclease, SAM-fold domain; 5'-3' exonuclease, N-terminal resolvase-like domain; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2 YP_005276671.1 TIGRFAM: L-serine dehydratase 1; KEGG: sbc:SbBS512_E3075 L-serine ammonia-lyase 2; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain YP_005276672.1 TIGRFAM: serine transporter; KEGG: sbo:SBO_2677 serine transporter YP_005276673.1 PFAM: Conserved hypothetical protein CHP00730; KEGG: sbo:SBO_2676 hypothetical protein YP_005276674.1 TIGRFAM: 7-cyano-7-deazaguanine reductase; KEGG: sbc:SbBS512_E3078 7-cyano-7-deazaguanine reductase; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase YP_005276675.1 PFAM: Syd family protein; KEGG: sbo:SBO_2674 SecY interacting protein Syd YP_005276676.1 PFAM: protein of unknown function DUF446; KEGG: sdy:SDY_3009 hypothetical protein YP_005276677.1 PFAM: pseudouridine synthase; KEGG: eoh:ECO103_3334 tRNA pseudouridine synthase C YP_005276678.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: sdy:SDY_3007 flavodoxin YP_005276679.1 KEGG: ebd:ECBD_0940 D-galactonate transporter; TIGRFAM: d-galactonate transporter; PFAM: major facilitator superfamily MFS_1 YP_005276680.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ssn:SSON_2945 putative glucarate dehydratase YP_005276681.1 TIGRFAM: glucarate dehydratase; KEGG: eoh:ECO103_3330 (D)-glucarate dehydratase 1; PFAM: Mandelate racemase/muconate lactonizing protein YP_005276682.1 KEGG: sbo:SBO_2666 23S rRNA 5-methyluridine methyltransferase; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase YP_005276683.1 TIGRFAM: RelA/SpoT family protein; KEGG: sdy:SDY_3001 GDP/GTP pyrophosphokinase; PFAM: RelA/SpoT domain protein; TGS domain-containing protein; amino acid-binding ACT domain protein YP_005276684.1 PFAM: SpoVT/AbrB domain-containing protein; KEGG: sdy:SDY_3000 antitoxin MazE YP_005276685.1 PFAM: PemK family protein; KEGG: sdy:SDY_2999 toxin ChpA YP_005276686.1 KEGG: sbc:SbBS512_E3092 nucleoside triphosphate pyrophosphohydrolase; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase YP_005276687.1 TIGRFAM: CTP synthase; KEGG: sdy:SDY_2997 CTP synthetase; PFAM: CTP synthase-like; glutamine amidotransferase class-I YP_005276688.1 TIGRFAM: enolase; KEGG: sdy:SDY_2996 phosphopyruvate hydratase; PFAM: Enolase-like YP_005276689.1 PFAM: protein of unknown function DUF477; KEGG: eoi:ECO111_3502 hypothetical protein YP_005276690.1 KEGG: ebd:ECBD_0952 hypothetical protein YP_005276691.1 PFAM: Radical SAM domain protein; KEGG: sdy:SDY_2981 hypothetical protein YP_005276692.1 PFAM: Carbohydrate kinase, FGGY-like; KEGG: eoh:ECO103_3319 putative kinase YP_005276693.1 PFAM: major facilitator superfamily MFS_1; KEGG: eoh:ECO103_3318 putative transporter YP_005276694.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ebd:ECBD_0956 short-chain dehydrogenase/reductase SDR YP_005276695.1 KEGG: eoh:ECO103_3316 putative FAD containing dehydrogenase; PFAM: FAD linked oxidase domain protein YP_005276696.1 PFAM: major facilitator superfamily MFS_1; KEGG: ebd:ECBD_0958 major facilitator superfamily MFS_1 YP_005276697.1 KEGG: ssn:SSON_2923 putative transport protein; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SMART: Electron transfer flavoprotein alpha/beta-subunit YP_005276698.1 PFAM: Electron transfer flavoprotein alpha subunit ; Electron transfer flavoprotein alpha/beta-subunit; KEGG: ssn:SSON_2922 putative flavoprotein YP_005276699.1 PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: ebd:ECBD_0961 glycerol-3-phosphate responsive antiterminator, GlpP YP_005276700.1 KEGG: ssn:SSON_2920 hypothetical protein YP_005276701.1 PFAM: FAD dependent oxidoreductase; KEGG: ssn:SSON_2919 hypothetical protein YP_005276702.1 PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; manually curated; KEGG: sfv:SFV_2740 putative 6-pyruvoyl tetrahydrobiopterin synthase; TIGRFAM: 6-pyruvoyl tetrahydropterin synthase YP_005276703.1 KEGG: eoj:ECO26_3835 sulfite reductase subunit alpha; TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha chain; PFAM: FAD-binding domain protein; flavodoxin/nitric oxide synthase; oxidoreductase FAD/NAD(P)-binding domain protein YP_005276704.1 KEGG: sbc:SbBS512_E3112 sulfite reductase subunit beta; TIGRFAM: sulfite reductase (NADPH) hemoprotein, beta-component; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein YP_005276705.1 KEGG: eoi:ECO111_3487 phosphoadenosine phosphosulfate reductase; TIGRFAM: phosphoadenosine phosphosulfate reductase; PFAM: phosphoadenosine phosphosulfate reductase YP_005276706.1 PFAM: Hok/gef cell toxic protein; KEGG: sbc:SbBS512_E3114 hok/gef family protein YP_005276707.1 KEGG: eoi:ECO111_3485 putative helicase; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated HD domain protein; SMART: DEAD-like helicase YP_005276708.1 KEGG: eoj:ECO26_3829 hypothetical protein; TIGRFAM: CRISPR-associated protein, Cse1 family; PFAM: CRISPR-associated protein Cse1 YP_005276709.1 KEGG: eoi:ECO111_3483 hypothetical protein; TIGRFAM: CRISPR-associated protein, Cse2 family; PFAM: CRISPR-associated protein Cse2 YP_005276710.1 KEGG: eoi:ECO111_3482 hypothetical protein; TIGRFAM: CRISPR-associated protein, Cse4 family; PFAM: CRISPR-associated protein CT1975 YP_005276711.1 KEGG: eok:G2583_3405 CRISPR-associated protein Cas5; TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; PFAM: CRISPR-associated protein, Cas5 YP_005276712.1 KEGG: eok:G2583_3404 CRISPR-associated protein, CSE3 family; TIGRFAM: CRISPR-associated protein, Cse3 family; PFAM: CRISPR-associated protein CT1974 YP_005276713.1 KEGG: sbo:SBO_2765 hypothetical protein; TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48 YP_005276714.1 KEGG: sbc:SbBS512_E3120 hypothetical protein; TIGRFAM: CRISPR-associated protein Cas2; PFAM: CRISPR-associated protein Cas2 YP_005276715.1 PFAM: peptidase M28; KEGG: sbc:SbBS512_E3121 alkaline phosphatase isozyme conversion aminopeptidase YP_005276716.1 KEGG: sfv:SFV_2746 sulfate adenylyltransferase subunit 2; TIGRFAM: sulfate adenylyltransferase, small subunit; PFAM: phosphoadenosine phosphosulfate reductase YP_005276717.1 TIGRFAM: sulfate adenylyltransferase, large subunit; KEGG: ssn:SSON_2899 sulfate adenylyltransferase subunit 1; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein YP_005276718.1 TIGRFAM: adenylylsulfate kinase; KEGG: sdy:SDY_2949 adenylylsulfate kinase; PFAM: adenylylsulfate kinase YP_005276719.1 KEGG: sdy:SDY_2948 hypothetical protein YP_005276720.1 PFAM: Septum formation initiator; KEGG: sdy:SDY_2947 cell division protein FtsB YP_005276721.1 KEGG: sdy:SDY_2946 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_005276722.1 KEGG: sdy:SDY_2945 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase YP_005276723.1 PFAM: tRNA pseudouridine synthase D TruD; KEGG: sdy:SDY_2944 tRNA pseudouridine synthase D YP_005276724.1 KEGG: efe:EFER_0324 stationary phase survival protein SurE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE YP_005276725.1 TIGRFAM: protein-L-isoaspartate O-methyltransferase; KEGG: sdy:SDY_2942 protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_005276726.1 KEGG: ebd:ECBD_0982 lipoprotein NlpD; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM YP_005276727.1 manually curated; TIGRFAM: RNA polymerase sigma factor RpoS; RNA polymerase sigma factor, sigma-70 family; KEGG: sfl:SF2764 RNA polymerase sigma factor RpoS; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 4 domain protein YP_005276728.1 KEGG: eoh:ECO103_3282 transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_005276729.1 KEGG: sfx:S2955 phenylacrylic acid decarboxylase-like protein; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein YP_005276730.1 KEGG: eoj:ECO26_3807 putative 4-hydroxybenzoate decarboxylase; TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein YP_005276731.1 KEGG: eoi:ECO111_3461 hypothetical protein YP_005276732.1 KEGG: eoh:ECO103_3278 inner membrane permease YgbN; TIGRFAM: gluconate transporter; PFAM: Gluconate transporter YP_005276733.1 KEGG: eoi:ECO111_3459 hypothetical protein; PFAM: Xylose isomerase domain-containing protein TIM barrel YP_005276734.1 PFAM: class II aldolase/adducin family protein; KEGG: sbc:SbBS512_E3136 putative aldolase YP_005276735.1 PFAM: type III effector Hrp-dependent outers; KEGG: eoj:ECO26_3802 hypothetical protein YP_005276736.1 KEGG: sbc:SbBS512_E3138 NAD binding domain of 6-phosphogluconate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding YP_005276737.1 KEGG: sbo:SBO_2785 putative DeoR-type transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_005276738.1 PFAM: metallophosphoesterase; KEGG: eoh:ECO103_3272 serine/threonine-specific protein phosphatase 2 YP_005276739.1 TIGRFAM: DNA mismatch repair protein MutS; PFAM: MutS III domain protein; DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein; KEGG: eok:G2583_3383 DNA mismatch repair protein MutS; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein YP_005276740.1 KEGG: ebd:ECBD_0992 hypothetical protein YP_005276741.1 KEGG: sbc:SbBS512_E3145 hypothetical protein YP_005276742.1 KEGG: eok:G2583_3380 formate hydrogenlyase transcriptional activator; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: AAA ATPase; GAF domain protein YP_005276743.1 KEGG: eok:G2583_3379 hydrogenase maturation factor; TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_005276744.1 KEGG: sbc:SbBS512_E3148 hydrogenase expression/formation protein HypD; TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein YP_005276745.1 KEGG: sdy:SDY_2925 hydrogenase assembly chaperone; TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC) YP_005276746.1 KEGG: sbc:SbBS512_E3150 hydrogenase nickel incorporation protein HypB; TIGRFAM: hydrogenase accessory protein HypB; PFAM: cobalamin synthesis protein P47K YP_005276747.1 KEGG: ssn:SSON_2873 hydrogenase nickel incorporation protein; TIGRFAM: hydrogenase nickel insertion protein HypA; PFAM: hydrogenase expression/synthesis HypA YP_005276748.1 KEGG: sfv:SFV_2778 formate hydrogenlyase regulatory protein HycA YP_005276749.1 KEGG: sdy:SDY_2921 small subunit of hydrogenase-3, iron-sulfur protein YP_005276750.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: ebd:ECBD_1002 formate hydrogenlyase subunit 3 YP_005276751.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: ebd:ECBD_1003 respiratory-chain NADH dehydrogenase subunit 1 YP_005276752.1 PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; nickel-dependent hydrogenase large subunit; NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: sbo:SBO_2797 large subunit of hydrogenase 3 YP_005276753.1 KEGG: sbo:SBO_2798 formate hydrogenlyase complex iron-sulfur subunit YP_005276754.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: ebd:ECBD_1006 NADH ubiquinone oxidoreductase 20 kDa subunit YP_005276755.1 PFAM: formate hydrogenlyase maturation HycH; KEGG: sbc:SbBS512_E3158 formate hydrogenlyase maturation protein YP_005276756.1 KEGG: sbc:SbBS512_E3159 hydrogenase 3 maturation protease; TIGRFAM: hydrogenase maturation protease HycI; hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein YP_005276757.1 KEGG: eoh:ECO103_4940 putative IS621 transposase; PFAM: transposase IS116/IS110/IS902 family protein; SMART: Helix-hairpin-helix DNA-binding class 1 YP_005276758.1 PFAM: glycoside hydrolase family 1; KEGG: ssn:SSON_2860 cryptic 6-phospho-beta-glucosidase YP_005276759.1 TIGRFAM: PTS system, maltose and glucose-specific subfamily, IIC subunit; KEGG: ssn:SSON_2859 PTS system cellobiose/arbutin/salicin-specific transporter subunits IIBC; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site YP_005276760.1 KEGG: eoh:ECO103_3249 DNA-binding transcriptional repressor AscG; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_005276761.1 manually curated; KEGG: sbc:SbBS512_E3164 electron transport protein HydN YP_005276762.1 KEGG: eoh:ECO103_3247 carbamoyl phosphate phosphatase HypF; TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: SUA5/yciO/yrdC domain; acylphosphatase YP_005276763.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ebd:ECBD_1014 nitric oxide reductase YP_005276764.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; flavodoxin/nitric oxide synthase; KEGG: eok:G2583_3358 hypothetical protein YP_005276765.1 KEGG: eoi:ECO111_3427 anaerobic nitric oxide reductase transcription regulator; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; SMART: GAF domain protein; AAA ATPase YP_005276766.1 TIGRFAM: KpsF/GutQ family protein; KEGG: sbo:SBO_2810 D-arabinose 5-phosphate isomerase; PFAM: sugar isomerase (SIS); CBS domain containing protein YP_005276767.1 KEGG: sfv:SFV_2798 DNA-bindng transcriptional repressor SrlR; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_005276768.1 PFAM: Glucitol operon activator; KEGG: sbc:SbBS512_E3171 DNA-binding transcriptional activator GutM YP_005276769.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sdy:SDY_2902 sorbitol-6-phosphate dehydrogenase YP_005276770.1 KEGG: sfv:SFV_2801 PTS system glucitol/sorbitol-specific transporter subunit IIA; TIGRFAM: PTS system, glucitol/sorbitol-specific IIA subunit; PFAM: PTS system glucitol/sorbitol-specific IIA component YP_005276771.1 TIGRFAM: PTS system, glucitol/sorbitol-specific, IIBC subunit; KEGG: eoh:ECO103_3238 glucitol/sorbitol-specific enzyme IIB component; PFAM: Sorbitol phosphotransferase protein II domain-containing protein YP_005276772.1 KEGG: sdy:SDY_2898 PTS system, glucitol/sorbitol-specific IIC component; TIGRFAM: PTS system, glucitol/sorbitol-specific, IIC subunit; PFAM: PTS system protein II sorbitol-specific factor YP_005276773.1 TIGRFAM: lytic murein transglycosylase B; KEGG: sfv:SFV_2804 murein hydrolase B YP_005276774.1 PFAM: CinA domain protein; KEGG: sbo:SBO_2818 competence damage-inducible protein A YP_005276775.1 TIGRFAM: recA protein; PFAM: RecA domain protein; KEGG: sdy:SDY_2895 recombinase A; SMART: AAA ATPase YP_005276776.1 PFAM: regulatory protein RecX; KEGG: sfv:SFV_2807 recombination regulator RecX YP_005276777.1 KEGG: ssn:SSON_2841 alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; Threonyl/alanyl tRNA synthetase SAD; phosphoesterase DHHA1 YP_005276778.1 KEGG: cro:ROD_31181 carbon storage regulator; TIGRFAM: carbon storage regulator; PFAM: carbon storage regulator YP_005276779.1 KEGG: eok:G2583_3338 HAD-superfamily hydrolase, subfamily IA; TIGRFAM: beta-phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_005276780.1 KEGG: sbo:SBO_2828 hypothetical protein YP_005276781.1 KEGG: sfv:SFV_2816 glutamate--cysteine ligase; TIGRFAM: glutamate/cysteine ligase; PFAM: glutamate--cysteine ligase YP_005276782.1 KEGG: sdy:SDY_2884 S-ribosylhomocysteinase; PFAM: LuxS protein YP_005276783.1 KEGG: efe:EFER_0383 putative RNA related enzyme YP_005276784.1 KEGG: sdy:SDY_2882 hypothetical protein YP_005276785.1 KEGG: ebd:ECBD_1034 drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_005276786.1 KEGG: sbo:SBO_2832 multidrug resistance secretion protein; TIGRFAM: efflux pump membrane protein; PFAM: secretion protein HlyD family protein YP_005276787.1 KEGG: sbc:SbBS512_E3192 transcriptional repressor MprA; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_005276788.1 KEGG: sbc:SbBS512_E3193 hypothetical protein YP_005276789.1 PFAM: AzlC family protein; KEGG: ssn:SSON_2826 hypothetical protein YP_005276790.1 PFAM: major facilitator superfamily MFS_1; KEGG: eoi:ECO111_3404 putative transporter YP_005276791.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: ebd:ECBD_1040 glycine betaine transporter periplasmic subunit YP_005276792.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbc:SbBS512_E3201 glycine betaine transporter membrane protein YP_005276793.1 TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; CBS domain containing protein; KEGG: sbc:SbBS512_E3202 glycine betaine transporter ATP-binding subunit; SMART: AAA ATPase YP_005276794.1 KEGG: ssn:SSON_2821 ribonucleotide-diphosphate reductase subunit beta; PFAM: ribonucleotide reductase YP_005276795.1 KEGG: eoh:ECO103_3216 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase domain protein; Ribonucleotide reductase large subunit domain protein YP_005276796.1 KEGG: sbc:SbBS512_E3205 ribonucleotide reductase stimulatory protein; TIGRFAM: NrdI protein; PFAM: NrdI family protein YP_005276797.1 KEGG: sbo:SBO_2844 glutaredoxin-like protein; TIGRFAM: glutaredoxin-like protein NrdH; PFAM: glutaredoxin YP_005276798.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: sdy:SDY_2863 hypothetical protein YP_005276799.1 PFAM: Protein of unknown function DUF2002; KEGG: sbc:SbBS512_E3210 hypothetical protein YP_005276800.1 PFAM: protein of unknown function DUF1144; KEGG: sbc:SbBS512_E3211 hypothetical protein YP_005276801.1 KEGG: sdy:SDY_2859 DNA binding protein, nucleoid-associated; PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS YP_005276802.1 SMART: Rhodanese domain protein; KEGG: ebw:BWG_2411 putative inner membrane protein with hydrolase activity YP_005276803.1 KEGG: sbo:SBO_2852 hypothetical protein; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_005276804.1 PFAM: protein of unknown function UPF0057; KEGG: sdy:SDY_2856 hypothetical protein YP_005276805.1 KEGG: sdy:SDY_2855 LysM domain/BON superfamily protein; PFAM: Peptidoglycan-binding lysin domain; transport-associated; SMART: Peptidoglycan-binding LysM; Transport-associated and nodulation region YP_005276806.1 KEGG: sdy:SDY_2854 DNA-binding transcriptional regulator CsiR; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_005276807.1 KEGG: eoh:ECO103_3204 gamma-aminobutyrate transporter; TIGRFAM: GABA permease; PFAM: amino acid permease-associated region YP_005276808.1 KEGG: ebd:ECBD_1057 4-aminobutyrate aminotransferase; TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III YP_005276809.1 KEGG: eok:G2583_3307 succinate-semialdehyde dehydrogenase (NAD(P)(+)); TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_005276810.1 PFAM: FAD dependent oxidoreductase; KEGG: ebd:ECBD_1059 hydroxyglutarate oxidase YP_005276811.1 PFAM: protein of unknown function CsiD; KEGG: ssn:SSON_2803 hypothetical protein YP_005276812.1 KEGG: ssn:SSON_2802 putative enzyme; manually curated; PFAM: alpha amylase all-beta YP_005276813.1 PFAM: transposase IS3/IS911 family protein; KEGG: cro:ROD_49861 IS3 transposase A YP_005276814.1 PFAM: Integrase catalytic region; KEGG: cro:ROD_49871 IS3 transposase B YP_005276815.1 KEGG: eoi:ECO111_3380 putative histidine kinase-like protein; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_005276816.1 KEGG: eoi:ECO111_3379 hypothetical protein YP_005276817.1 KEGG: eoh:ECO103_3196 hypothetical protein YP_005276818.1 PFAM: integrase family protein; KEGG: eoh:ECO103_3195 putative integrase YP_005276819.1 KEGG: sdy:SDY_2793 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein YP_005276820.1 PFAM: cyclase/dehydrase; KEGG: sdy:SDY_2792 hypothetical protein YP_005276821.1 PFAM: protein of unknown function UPF0125; KEGG: sbc:SbBS512_E3007 hypothetical protein YP_005276822.1 PFAM: SmpA/OmlA domain-containing protein; KEGG: sdy:SDY_2790 hypothetical protein YP_005276823.1 KEGG: ssn:SSON_2772 recombination and repair protein; TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein YP_005276824.1 PFAM: ATP-NAD/AcoX kinase; KEGG: sbc:SbBS512_E3004 inorganic polyphosphate/ATP-NAD kinase YP_005276825.1 PFAM: GrpE protein; KEGG: sdy:SDY_2787 heat shock protein GrpE YP_005276826.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: sbc:SbBS512_E3001 hypothetical protein YP_005276827.1 PFAM: cytochrome c assembly protein; KEGG: sdy:SDY_2785 hypothetical protein YP_005276828.1 TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; Signal peptide binding (SRP54) M- domain protein; KEGG: sbc:SbBS512_E2999 signal recognition particle protein; SMART: AAA ATPase YP_005276829.1 KEGG: sdy:SDY_2783 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16 YP_005276830.1 KEGG: sdy:SDY_2782 16S rRNA-processing protein RimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein YP_005276831.1 TIGRFAM: tRNA (guanine-N1)-methyltransferase; KEGG: sdy:SDY_2781 tRNA (guanine-N(1)-)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase YP_005276832.1 KEGG: sdy:SDY_2780 50S ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19 YP_005276833.1 PFAM: OmpA/MotB domain protein; KEGG: ebd:ECBD_1081 putative outer membrane lipoprotein YP_005276834.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: eoh:ECO103_3178 hypothetical protein; SMART: GGDEF domain containing protein YP_005276835.1 KEGG: sbc:SbBS512_E2990 hypothetical protein YP_005276836.1 KEGG: ebd:ECBD_1084 hypothetical protein YP_005276837.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: eoh:ECO103_3175 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA YP_005276838.1 KEGG: sbc:SbBS512_E2987 bifunctional chorismate mutase/prephenate dehydrogenase; TIGRFAM: chorismate mutase; PFAM: Chorismate mutase, type II; Prephenate dehydrogenase YP_005276839.1 KEGG: sbc:SbBS512_E2986 bifunctional chorismate mutase/prephenate dehydratase; TIGRFAM: chorismate mutase; PFAM: prephenate dehydratase; Chorismate mutase, type II YP_005276840.1 KEGG: sdy:SDY_2768 translation inhibitor protein RaiA; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA YP_005276841.1 TIGRFAM: outer membrane assembly lipoprotein YfiO; KEGG: sbc:SbBS512_E2976 outer membrane protein assembly complex subunit YfiO YP_005276842.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: eoh:ECO103_3169 23S rRNA pseudouridine synthase D; SMART: RNA-binding S4 domain protein YP_005276843.1 PFAM: protein of unknown function DUF152; KEGG: eoh:ECO103_3168 hypothetical protein YP_005276844.1 TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; Clp domain protein; AAA ATPase central domain protein; Clp ATPase-like; KEGG: sbo:SBO_2627 protein disaggregation chaperone; SMART: AAA ATPase YP_005276845.1 TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); KEGG: sdy:SDY_2830 alpha-ketoglutarate transporter YP_005276846.1 KEGG: sbc:SbBS512_E2949 hypothetical protein YP_005276847.1 KEGG: efe:EFER_0488 phosphatidylserine synthase; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase YP_005276848.1 PFAM: GCN5-related N-acetyltransferase; CoA-binding domain protein; KEGG: eoh:ECO103_3163 fused putative acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit YP_005276849.1 PFAM: DTW domain containing protein; KEGG: sdy:SDY_2826 hypothetical protein YP_005276850.1 KEGG: sdy:SDY_2825 thioredoxin 2; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain-containing protein YP_005276851.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: sdy:SDY_2824 putative methyltransferase YP_005276852.1 KEGG: sdy:SDY_2823 uracil-DNA glycosylase; TIGRFAM: uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase superfamily YP_005276853.1 PFAM: formate C-acetyltransferase glycine radical; KEGG: sbc:SbBS512_E2957 autonomous glycyl radical cofactor GrcA YP_005276854.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: sbc:SbBS512_E2958 neutral amino-acid efflux protein YP_005276855.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eoh:ECO103_3156 putative DNA-binding transcriptional regulator, LysR-type YP_005276856.1 KEGG: ssn:SSON_2702 ATP-dependent RNA helicase SrmB; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_005276857.1 PFAM: methyltransferase small; KEGG: sfv:SFV_2638 putative enzyme YP_005276858.1 KEGG: eoh:ECO103_3152 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_005276859.1 KEGG: sdy:SDY_2814 RNA polymerase sigma factor RpoE; TIGRFAM: RNA polymerase sigma factor RpoE; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2 YP_005276860.1 PFAM: Anti sigma-E protein RseA family protein; Anti sigma-E protein RseA domain protein; KEGG: sdy:SDY_2813 anti-RNA polymerase sigma factor SigE YP_005276861.1 PFAM: MucB/RseB family protein; KEGG: sdy:SDY_2812 periplasmic negative regulator of sigmaE YP_005276862.1 PFAM: Positive regulator of sigma(E) RseC/MucC; KEGG: sbc:SbBS512_E2935 SoxR reducing system protein RseC YP_005276863.1 KEGG: sbc:SbBS512_E2934 GTP-binding protein LepA; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: GTP-binding protein LepA domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein YP_005276864.1 KEGG: sbc:SbBS512_E2933 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; Peptidase S26, conserved region YP_005276865.1 SMART: ribonuclease III; double-stranded RNA binding domain protein; TIGRFAM: ribonuclease III; KEGG: sdy:SDY_2808 ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein YP_005276866.1 KEGG: sbc:SbBS512_E2931 GTP-binding protein Era; TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein YP_005276867.1 KEGG: ssn:SSON_2689 DNA repair protein RecO; TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO YP_005276868.1 TIGRFAM: pyridoxal phosphate biosynthetic protein PdxJ; KEGG: efe:EFER_0510 pyridoxine 5'-phosphate synthase; PFAM: Pyridoxal phosphate biosynthetic protein PdxJ YP_005276869.1 KEGG: sbc:SbBS512_E2928 4'-phosphopantetheinyl transferase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase YP_005276870.1 KEGG: sbc:SbBS512_E2927 4Fe-4S binding domain protein YP_005276871.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: sbc:SbBS512_E2926 putative DNA-binding transcriptional regulator YP_005276872.1 TIGRFAM: HAD superfamily (subfamily IF) hydrolase, YfhB; KEGG: sbc:SbBS512_E2925 hypothetical protein YP_005276873.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: sbc:SbBS512_E2923 tRNA-specific adenosine deaminase YP_005276874.1 KEGG: eok:G2583_3089 putative soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein; PFAM: Lytic transglycosylase catalytic; extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_005276875.1 TIGRFAM: phosphoribosylformylglycinamidine synthase; KEGG: sbc:SbBS512_E2922 phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_005276876.1 manually curated; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: sdy:SDY_2746 putative 2-component sensor protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_005276877.1 KEGG: eoi:ECO111_3281 hypothetical protein YP_005276878.1 KEGG: eoh:ECO103_3075 putative DNA-binding response regulator in two-component system; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; SMART: response regulator receiver; AAA ATPase YP_005276879.1 PFAM: nitrogen regulatory protein P-II; KEGG: sdy:SDY_2743 nitrogen regulatory protein P-II 1 YP_005276880.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; globin; Oxidoreductase FAD-binding domain protein; KEGG: eoh:ECO103_3073 nitric oxide dioxygenase YP_005276881.1 KEGG: sbc:SbBS512_E2916 serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase YP_005276882.1 PFAM: ROK family protein; KEGG: sbo:SBO_2578 putative NAGC-like transcriptional regulator YP_005276883.1 PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: ebd:ECBD_1135 tetratricopeptide TPR_2 repeat protein YP_005276884.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sfv:SFV_2596 putative LacI-type transcriptional regulator YP_005276885.1 KEGG: eoj:ECO26_3594 fused putative sugar transporter subunits of ABC superfamily: ATP-binding components; PFAM: ABC transporter related; SMART: AAA ATPase YP_005276886.1 PFAM: inner-membrane translocator; KEGG: eoi:ECO111_3270 putative sugar transporter subunit YP_005276887.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ssn:SSON_2628 putative oxidoreductase YP_005276888.1 PFAM: Aldose 1-epimerase; KEGG: eoh:ECO103_3065 hypothetical protein YP_005276889.1 PFAM: DoxX family protein; KEGG: sfx:S2762 hypothetical protein YP_005276890.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: eoh:ECO103_3062 phenylpropionate dioxygenase ferredoxin reductase subunit YP_005276891.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sbo:SBO_2565 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase YP_005276892.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: ssn:SSON_2622 3-phenylpropionate dioxygenase ferredoxin subunit YP_005276893.1 PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit; KEGG: eoi:ECO111_3263 3-phenylpropionate dioxygenase subunit beta YP_005276894.1 PFAM: Aromatic-ring-hydroxylating dioxygenase, alpha subunit-like; Rieske [2Fe-2S] iron-sulphur domain; KEGG: ssn:SSON_2620 large terminal subunit of phenylpropionate dioxygenase YP_005276895.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebd:ECBD_1147 DNA-binding transcriptional regulator HcaR YP_005276896.1 KEGG: eoh:ECO103_3053 putative 3-phenylpropionic acid transporter; TIGRFAM: phenyl proprionate permease family protein; PFAM: major facilitator superfamily MFS_1 YP_005276897.1 PFAM: PRD domain protein; KEGG: eoh:ECO103_3052 stationary phase inducible protein CsiE YP_005276898.1 PFAM: alpha/beta hydrolase fold; KEGG: ebd:ECBD_1150 putative enzyme YP_005276899.1 PFAM: inositol monophosphatase; KEGG: sbo:SBO_2557 inositol monophosphatase YP_005276900.1 KEGG: sbc:SbBS512_E2907 RNA methyltransferase, TrmH family, group 1; TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU) YP_005276901.1 KEGG: sdy:SDY_2727 DNA-binding transcriptional regulator IscR; TIGRFAM: iron-sulfur cluster assembly transcription factor IscR; transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074 YP_005276902.1 KEGG: sdy:SDY_2726 cysteine desulfurase; TIGRFAM: cysteine desulfurase IscS; PFAM: aminotransferase class V YP_005276903.1 KEGG: sdy:SDY_2725 scaffold protein; TIGRFAM: FeS cluster assembly scaffold IscU; PFAM: nitrogen-fixing NifU domain protein YP_005276904.1 KEGG: sdy:SDY_2724 iron-sulfur cluster assembly protein; TIGRFAM: iron-sulfur cluster assembly protein IscA; iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein YP_005276905.1 TIGRFAM: co-chaperone Hsc20; PFAM: HSC20 oligomerisation; heat shock protein DnaJ domain protein; KEGG: eoh:ECO103_3044 co-chaperone HscB; SMART: heat shock protein DnaJ domain protein YP_005276906.1 KEGG: sdy:SDY_2722 chaperone protein HscA; TIGRFAM: Fe-S protein assembly chaperone HscA; PFAM: Heat shock protein 70 YP_005276907.1 KEGG: sbc:SbBS512_E2900 ferredoxin, 2Fe-2S type, ISC system; TIGRFAM: ferredoxin, 2Fe-2S type, ISC system; PFAM: ferredoxin YP_005276908.1 KEGG: sdy:SDY_2720 hypothetical protein; TIGRFAM: FeS assembly protein IscX; PFAM: protein of unknown function DUF528 YP_005276909.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: ebw:BWG_2287 aminopeptidase B YP_005276910.1 KEGG: eoh:ECO103_3039 enhanced serine sensitivity protein SseB YP_005276911.1 KEGG: ssn:SSON_2603 3-mercaptopyruvate sulfurtransferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_005276912.1 PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2; KEGG: eoi:ECO111_3244 hypothetical protein YP_005276913.1 TIGRFAM: penicillin-binding protein 1C; KEGG: eoh:ECO103_3036 penicillin-binding protein 1C; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Penicillin-binding domain protein YP_005276914.1 PFAM: nucleoside diphosphate kinase; KEGG: sdy:SDY_2714 nucleoside diphosphate kinase; SMART: nucleoside diphosphate kinase YP_005276915.1 KEGG: sdy:SDY_2713 hypothetical protein; TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein YP_005276916.1 KEGG: eoh:ECO103_3033 cytoskeletal protein RodZ; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_005276917.1 KEGG: efe:EFER_0657 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: IspG family protein YP_005276918.1 TIGRFAM: histidyl-tRNA synthetase; KEGG: ebd:ECBD_1172 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein YP_005276919.1 PFAM: Protein of unknown function DUF2133; KEGG: sdy:SDY_2709 hypothetical protein YP_005276920.1 TIGRFAM: outer membrane assembly lipoprotein YfgL; PFAM: Pyrrolo-quinoline quinone repeat-containing protein; KEGG: sbo:SBO_2536 outer membrane protein assembly complex subunit YfgL; SMART: Pyrrolo-quinoline quinone beta-propeller repeat YP_005276921.1 KEGG: ebd:ECBD_1175 GTP-binding protein EngA; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related YP_005276922.1 PFAM: protein of unknown function DUF1407; KEGG: sdy:SDY_2706 hypothetical protein YP_005276923.1 KEGG: sbc:SbBS512_E2885 exodeoxyribonuclease VII large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit-like; nucleic acid binding OB-fold tRNA/helicase-type YP_005276924.1 SMART: CBS domain containing protein; TIGRFAM: inosine-5'-monophosphate dehydrogenase; KEGG: sbc:SbBS512_E2883 inosine 5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein YP_005276925.1 KEGG: eok:G2583_3031 GMP synthase (glutamine-hydrolyzing); TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I YP_005276926.1 KEGG: ebd:ECBD_1180 hypothetical protein YP_005276927.1 KEGG: ssn:SSON_2587 putative outer membrane lipoprotein YP_005276928.1 manually curated; KEGG: sdy:SDY_2696 hypothetical protein YP_005276929.1 KEGG: ebd:ECBD_1184 hypothetical protein YP_005276930.1 KEGG: eoh:ECO103_3020 putative inner membrane protein; PFAM: MASE1 domain protein; EAL domain protein; SMART: EAL domain protein; GGDEF domain containing protein YP_005276931.1 KEGG: ssn:SSON_2584 exopolyphosphatase; PFAM: Ppx/GppA phosphatase YP_005276932.1 TIGRFAM: Polyphosphate kinase; KEGG: ebd:ECBD_1187 polyphosphate kinase; PFAM: Polyphosphate kinase YP_005276933.1 KEGG: sfv:SFV_2545 phosphoribosylglycinamide formyltransferase; TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein YP_005276934.1 TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; KEGG: sfx:S2692 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_005276935.1 KEGG: sdy:SDY_2687 uracil phosphoribosyltransferase; TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_005276936.1 KEGG: ssn:SSON_2579 uracil transporter; TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease YP_005276937.1 KEGG: sbc:SbBS512_E2870 DNA replication initiation factor; TIGRFAM: DnaA regulatory inactivator Hda; PFAM: Chromosomal replication initiator DnaA YP_005276938.1 KEGG: sdy:SDY_2684 putative oxidoreductase; TIGRFAM: arsenate reductase; PFAM: arsenate reductase and related YP_005276939.1 PFAM: peptidase M48 Ste24p; KEGG: sfv:SFV_2539 hypothetical protein YP_005276940.1 PFAM: protein of unknown function UPF0118; KEGG: sdy:SDY_2682 putative permease YP_005276941.1 KEGG: eoi:ECO111_3216 putative formate transporter; TIGRFAM: formate/nitrite transporter; PFAM: formate/nitrite transporter YP_005276942.1 KEGG: eoi:ECO111_3215 DNA-binding transcriptional activator HyfR, formate sensing; PFAM: sigma-54 factor interaction domain-containing protein; GAF domain protein; helix-turn-helix Fis-type; SMART: GAF domain protein; AAA ATPase YP_005276943.1 PFAM: formate hydrogenlyase maturation HycH; KEGG: eoi:ECO111_3214 putative processing element hydrogenase 4 YP_005276944.1 KEGG: sbo:SBO_2509 hydrogenase 4 subunit H YP_005276945.1 PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; nickel-dependent hydrogenase large subunit; NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: sbo:SBO_2508 hydrogenase 4 subunit YP_005276946.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: eoi:ECO111_3209 hydrogenase 4 subunit F YP_005276947.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: ssn:SSON_2566 hydrogenase 4 membrane subunit YP_005276948.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: eoi:ECO111_3207 hydrogenase 4 subunit D YP_005276949.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: eoi:ECO111_3206 hydrogenase 4, membrane subunit HyfC YP_005276950.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: eoi:ECO111_3205 hydrogenase 4 subunit B YP_005276951.1 KEGG: ssn:SSON_2562 hydrogenase 4 Fe-S subunit YP_005276952.1 KEGG: sdy:SDY_2669 thioredoxin-dependent thiol peroxidase; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen YP_005276953.1 PFAM: amino acid-binding ACT domain protein; KEGG: sbc:SbBS512_E2851 glycine cleavage system transcriptional repressor YP_005276954.1 TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase YP_005276955.1 KEGG: ssn:SSON_2558 lipoprotein YP_005276956.1 manually curated; KEGG: sdy:SDY_2665 hypothetical protein YP_005276957.1 TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: sbc:SbBS512_E2848 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase YP_005276958.1 KEGG: eoh:ECO103_2987 putative post-segregational killing toxin YP_005276959.1 PFAM: PilT protein domain protein; KEGG: eoh:ECO103_2986 plasmid maintenance protein YP_005276960.1 PFAM: protein of unknown function zinc metallopeptidase; KEGG: sfv:SFV_2520 hypothetical protein YP_005276961.1 KEGG: eoh:ECO103_2984 putative hydrolase YP_005276962.1 PFAM: phospholipase/Carboxylesterase; KEGG: ebd:ECBD_1216 esterase YpfH YP_005276963.1 KEGG: sdy:SDY_2657 hypothetical protein YP_005276964.1 KEGG: sbo:SBO_2488 succinyl-diaminopimelate desuccinylase; TIGRFAM: succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_005276965.1 PFAM: arsenate reductase and related; KEGG: sdy:SDY_2655 hypothetical protein YP_005276966.1 KEGG: eoh:ECO103_2979 aminoglycoside/multidrug efflux system; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_005276967.1 KEGG: eoh:ECO103_2978 nitrate/nitrite sensor protein NarQ; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein YP_005276968.1 KEGG: eoi:ECO111_3188 putative oxidoreductase Fe-S binding subunit; TIGRFAM: glutamate synthase, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_005276969.1 PFAM: NUDIX hydrolase; KEGG: sbc:SbBS512_E2835 hydrolase, NUDIX family YP_005276970.1 PFAM: protein of unknown function DUF1176; KEGG: eoh:ECO103_2975 hypothetical protein YP_005276971.1 KEGG: ebd:ECBD_1225 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain-containing protein; Transketolase central region YP_005276972.1 KEGG: ebd:ECBD_1226 transaldolase A; TIGRFAM: transaldolase; PFAM: Transaldolase YP_005276973.1 PFAM: malic protein NAD-binding; malic protein domain protein; phosphate acetyl/butaryl transferase; KEGG: sbo:SBO_2478 malic enzyme YP_005276974.1 PFAM: microcompartments protein; KEGG: sfv:SFV_2506 hypothetical protein YP_005276975.1 TIGRFAM: ethanolamine utilization protein, EutP; KEGG: sbc:SbBS512_E2827 ethanolamine utilization protein, EutP YP_005276976.1 PFAM: Ethanolamine utilisation EutQ family protein; KEGG: eoh:ECO103_2969 hypothetical protein YP_005276977.1 KEGG: eoh:ECO103_2968 putative cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase YP_005276978.1 KEGG: ebd:ECBD_1232 phosphotransacetylase; TIGRFAM: phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase YP_005276979.1 PFAM: microcompartments protein; KEGG: sbc:SbBS512_E2823 ethanolamine utilization protein EutM YP_005276980.1 PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: sbc:SbBS512_E2822 ethanolamine utilization protein YP_005276981.1 PFAM: Aldehyde Dehydrogenase; KEGG: eoh:ECO103_2964 putative aldehyde dehydrogenase EutE YP_005276982.1 TIGRFAM: ethanolamine utilization protein EutJ family protein; KEGG: ebw:BWG_2216 putative chaperonin, ethanolamine utilization protein YP_005276983.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: efe:EFER_0726 putative alcohol dehydrogenase in ethanolamine utilization; ethanolaminosome YP_005276984.1 PFAM: Ethanolamine utilisation protein EutH; KEGG: eoh:ECO103_2961 putative inner membrane protein YP_005276985.1 PFAM: Ethanolamine utilisation EutA; KEGG: eoh:ECO103_2960 reactivating factor for ethanolamine ammonia lyase YP_005276986.1 KEGG: sbc:SbBS512_E2816 ethanolamine ammonia-lyase, large subunit; PFAM: Ethanolamine ammonia lyase large subunit YP_005276987.1 KEGG: sdy:SDY_2638 ethanolamine ammonia-lyase small subunit; PFAM: Ethanolamine ammonia-lyase light chain YP_005276988.1 PFAM: microcompartments protein; KEGG: sbc:SbBS512_E2811 putative ethanolamine utilization protein EutL YP_005276989.1 PFAM: microcompartments protein; KEGG: sbc:SbBS512_E2810 putative ethanolamine utilization protein EutK YP_005276990.1 KEGG: eoh:ECO103_2955 transcriptional regulator EutR; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_005276991.1 KEGG: sbo:SBO_2461 coproporphyrinogen III oxidase; PFAM: coproporphyrinogen III oxidase YP_005276992.1 KEGG: sbc:SbBS512_E2807 N-acetylmuramoyl-L-alanine amidase I; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin YP_005276993.1 KEGG: eok:G2583_2965 acetyltransferase YpeA; manually curated; PFAM: GCN5-related N-acetyltransferase YP_005276994.1 KEGG: eok:G2583_2964 hypothetical protein YP_005276995.1 PFAM: protein of unknown function DUF1131; KEGG: sdy:SDY_2630 hypothetical protein YP_005276996.1 KEGG: sbc:SbBS512_E2803 dyp-type peroxidase family protein; TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase YP_005276997.1 PFAM: beta-lactamase; KEGG: eoj:ECO26_3482 hypothetical protein YP_005276998.1 KEGG: eoh:ECO103_2947 PTS system N-acetylmuramic acid transporter subunits EIIBC; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site YP_005276999.1 KEGG: eoj:ECO26_3480 N-acetylmuramic acid-6-phosphate etherase; TIGRFAM: glucokinase regulatory-like protein; PFAM: sugar isomerase (SIS) YP_005277000.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: sbc:SbBS512_E2799 transcriptional regulator, RpiR family YP_005277001.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: eoh:ECO103_2944 short chain dehydrogenase YP_005277002.1 KEGG: eoh:ECO103_2943 thiosulfate transporter subunit; TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_005277003.1 KEGG: sbc:SbBS512_E2796 sulfate/thiosulfate transporter subunit; TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysT; PFAM: binding-protein-dependent transport systems inner membrane component YP_005277004.1 KEGG: eoi:ECO111_3152 sulfate/thiosulfate transporter permease subunit; TIGRFAM: sulfate ABC transporter, inner membrane subunit; sulfate ABC transporter, inner membrane subunit CysW; PFAM: binding-protein-dependent transport systems inner membrane component YP_005277005.1 TIGRFAM: sulfate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: eoh:ECO103_2940 sulfate/thiosulfate transporter subunit; SMART: AAA ATPase YP_005277006.1 KEGG: ssn:SSON_2510 cysteine synthase B; TIGRFAM: cysteine synthase B; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_005277007.1 KEGG: eoh:ECO103_2938 hypothetical protein YP_005277008.1 KEGG: ssn:SSON_2508 pyridoxal kinase; TIGRFAM: pyridoxal kinase; PFAM: Phosphomethylpyrimidine kinase type-1 YP_005277009.1 KEGG: ssn:SSON_2506 PTS system glucose-specific transporter subunit; TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain YP_005277010.1 KEGG: sdy:SDY_2613 phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region YP_005277011.1 KEGG: cro:ROD_23741 phosphocarrier protein HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr YP_005277012.1 KEGG: sbc:SbBS512_E2766 cysteine synthase A; TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_005277013.1 KEGG: eoh:ECO103_2932 putative sulfate transport protein CysZ YP_005277014.1 TIGRFAM: cell division protein ZipA; PFAM: ZipA FtsZ-binding region protein; KEGG: sfv:SFV_2464 cell division protein ZipA; SMART: ZipA FtsZ-binding region protein YP_005277015.1 TIGRFAM: DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; NAD-dependent DNA ligase OB-fold; helix-hairpin-helix motif; BRCT domain protein; KEGG: eoh:ECO103_2930 NAD-dependent DNA ligase LigA; SMART: NAD-dependent DNA ligase ; Helix-hairpin-helix DNA-binding class 1; BRCT domain protein YP_005277016.1 KEGG: sdy:SDY_2607 hypothetical protein YP_005277017.1 PFAM: Bile acid:sodium symporter; KEGG: ssn:SSON_2498 putative cytochrome oxidase YP_005277018.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sbc:SbBS512_E2773 transcriptional regulator, LysR family YP_005277019.1 KEGG: sbc:SbBS512_E2772 hypothetical protein YP_005277020.1 KEGG: sfx:S2605 glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain YP_005277021.1 KEGG: sbc:SbBS512_E2780 hypothetical protein; manually curated; PFAM: protein of unknown function DUF1323 YP_005277022.1 PFAM: protein of unknown function DUF1323; KEGG: sdy:SDY_2596 hypothetical protein YP_005277023.1 manually curated; PFAM: EAL domain protein; MASE1 domain protein; GGDEF domain containing protein; KEGG: sbo:SBO_2421 hypothetical protein; SMART: EAL domain protein; GGDEF domain containing protein YP_005277024.1 KEGG: sdy:SDY_2593 permease of transport system for 3 nucleosides; TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter domain protein; Na+ dependent nucleoside transporter; nucleoside recognition domain protein YP_005277025.1 KEGG: sbc:SbBS512_E2760 manganese transport protein MntH; TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein YP_005277026.1 PFAM: Protein of unknown function DUF2502; KEGG: sbc:SbBS512_E2759 hypothetical protein YP_005277027.1 PFAM: Cl- channel voltage-gated family protein; KEGG: sbc:SbBS512_E2758 hypothetical protein YP_005277028.1 TIGRFAM: glucokinase; KEGG: ssn:SSON_2480 glucokinase; PFAM: Glucokinase YP_005277029.1 TIGRFAM: PTS system, fructose-specific, IIB subunnit; KEGG: eoh:ECO103_2912 putative enzyme IIB component of PTS YP_005277030.1 KEGG: sbc:SbBS512_E2755 PTS system, fructose-like, IIC component; TIGRFAM: PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system EIIC YP_005277031.1 PFAM: peptidase M24; creatinase; KEGG: sbo:SBO_2411 aminopeptidase YP_005277032.1 KEGG: ebw:BWG_2152 exoaminopeptidase; PFAM: peptidase M42 family protein YP_005277033.1 KEGG: eoh:ECO103_2908 fused putative PTS enzymes: HPr component/enzyme I component/enzyme IIA component; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PTS system, fructose subfamily, IIA subunit; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; phosphoryl transfer system HPr; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 YP_005277034.1 KEGG: ssn:SSON_2474 putative AraC-type regulatory protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_005277035.1 KEGG: sbc:SbBS512_E2750 response regulator; PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver YP_005277036.1 KEGG: sbo:SBO_2406 putative sensor protein; PFAM: histidine kinase internal region; 5TM Receptors of the LytS-YhcK type transmembrane region; GAF domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_005277037.1 PFAM: aminotransferase class I and II; KEGG: ebd:ECBD_1293 aminotransferase YP_005277038.1 manually curated; TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; KEGG: sfv:SFV_2436 lipid A biosynthesis palmitoleoyl acyltransferase; PFAM: lipid A biosynthesis acyltransferase YP_005277039.1 KEGG: sdy:SDY_2575 hypothetical protein YP_005277040.1 KEGG: ssn:SSON_2467 hypothetical protein YP_005277041.1 KEGG: sdy:SDY_2573 hypothetical protein YP_005277042.1 KEGG: sbo:SBO_2400 formyl-coenzyme A transferase; TIGRFAM: formyl-CoA transferase; PFAM: L-carnitine dehydratase/bile acid-inducible protein F YP_005277043.1 KEGG: ssn:SSON_2464 putative oxalyl-CoA decarboxylase; TIGRFAM: oxalyl-CoA decarboxylase; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein YP_005277044.1 PFAM: Auxin Efflux Carrier; KEGG: sdy:SDY_2570 putative transporter YfdV YP_005277045.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: ebd:ECBD_1301 hypothetical protein YP_005277046.1 KEGG: eoi:ECO111_3106 hybrid sensory histidine kinase in two-component regulatory system with EvgA; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; extracellular solute-binding protein family 3; Hpt domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; extracellular solute-binding protein family 3; Hpt domain protein YP_005277047.1 KEGG: sdy:SDY_4477 DNA-binding transcriptional activator EvgA; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_005277048.1 KEGG: ebd:ECBD_1304 efflux pump membrane protein; TIGRFAM: efflux pump membrane protein; PFAM: secretion protein HlyD family protein YP_005277049.1 KEGG: sbo:SBO_2393 multidrug resistance protein Y; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_005277050.1 TIGRFAM: D-serine ammonia-lyase; KEGG: ebw:BWG_2134 D-serine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_005277051.1 manually curated; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; KEGG: eoh:ECO103_2889 sucrose operon repressor; SMART: regulatory protein LacI YP_005277052.1 TIGRFAM: sucrose-6-phosphate hydrolase; PFAM: Glycosyl hydrolase family 32 domain protein; KEGG: eoh:ECO103_2888 sucrose-6 phosphate hydrolase; SMART: glycoside hydrolase family 32 YP_005277053.1 PFAM: PfkB domain protein; KEGG: eoh:ECO103_2887 aminoimidazole riboside kinase YP_005277054.1 TIGRFAM: oligosaccharide/H+ symporter, major facilitator superfamily (MFS); KEGG: eoh:ECO103_2886 galactoside permease YP_005277055.1 KEGG: eoj:ECO26_3393 hypothetical protein YP_005277056.1 KEGG: eoi:ECO111_2978 hypothetical protein YP_005277057.1 KEGG: bge:BC1002_6529 hypothetical protein YP_005277058.1 PFAM: protein of unknown function DUF437; KEGG: ebr:ECB_00727 phage related protein YP_005277059.1 PFAM: protein of unknown function DUF551; KEGG: eoh:ECO103_1185 hypothetical protein YP_005277060.1 PFAM: protein of unknown function DUF550; KEGG: eoj:ECO26_3387 hypothetical protein YP_005277061.1 KEGG: shw:Sputw3181_2519 hypothetical protein YP_005277062.1 KEGG: seh:SeHA_C0371 hypothetical protein YP_005277063.1 manually curated; KEGG: sew:SeSA_A0608 hypothetical protein YP_005277064.1 PFAM: Bacteriophage P22, anti-RecBCD protein 2; KEGG: eoj:ECO26_0836 hypothetical protein YP_005277065.1 KEGG: sec:SC0331 endodeoxyribonuclease YP_005277066.1 KEGG: sed:SeD_A0611 single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n YP_005277067.1 PFAM: Rad52/22 double-strand break repair protein; KEGG: sec:SC0333 hypothetical protein YP_005277069.1 KEGG: esa:ESA_03091 hypothetical protein YP_005277070.1 KEGG: eok:G2583_0951 gene 34 protein YP_005277071.1 KEGG: plu:plu2928 hypothetical protein YP_005277072.1 KEGG: efe:EFER_2075 conserved hypothetical protein from phage origin YP_005277073.1 KEGG: eok:G2583_0954 CI protein; PFAM: Peptidase S24/S26A/S26B, conserved region; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_005277074.1 manually curated; PFAM: helix-turn-helix domain protein; KEGG: eok:G2583_0955 hypothetical protein; SMART: helix-turn-helix domain protein YP_005277075.1 PFAM: CII family protein; KEGG: efe:EFER_2070 regulatory protein CII from phage origin YP_005277076.1 KEGG: eoi:ECO111_2710 hypothetical protein YP_005277077.1 KEGG: eoi:ECO111_2709 putative replication protein YP_005277078.1 KEGG: sfv:SFV_0273 replication protein P; TIGRFAM: phage replicative helicase, DnaB family; PFAM: DnaB domain protein helicase domain protein YP_005277079.1 PFAM: NinB family protein; KEGG: eoj:ECO26_3197 hypothetical protein YP_005277080.1 KEGG: eoj:ECO26_3196 putative DNA methylase; TIGRFAM: phage N-6-adenine-methyltransferase; PFAM: DNA N-6-adenine-methyltransferase YP_005277081.1 KEGG: eoj:ECO26_1594 hypothetical protein; manually curated; PFAM: NINE family protein YP_005277082.1 KEGG: eoi:ECO111_0799 hypothetical protein YP_005277083.1 PFAM: NinF family protein; KEGG: sek:SSPA2242 hypothetical protein YP_005277084.1 PFAM: protein of unknown function DUF1364; KEGG: sek:SSPA2241 hypothetical protein YP_005277085.1 KEGG: eoj:ECO26_0855 putative Holliday-junction resolvase; PFAM: endodeoxyribonuclease RusA YP_005277086.1 PFAM: NinH family protein; KEGG: sek:SSPA2239 hypothetical protein YP_005277087.1 PFAM: antitermination protein; KEGG: sfv:SFV_0277 putative antitermination protein YP_005277088.1 KEGG: sfv:SFV_0278 cell lysis protein; TIGRFAM: phage holin, lambda family; PFAM: Holin phage lambda YP_005277089.1 KEGG: eoj:ECO26_3358 putative endolysin; PFAM: glycoside hydrolase family 24 YP_005277090.1 PFAM: lysis protein; KEGG: eok:G2583_0971 bacteriophage lysis protein YP_005277091.1 KEGG: eok:G2583_1727 hypothetical protein YP_005277092.1 KEGG: ses:SARI_02654 hypothetical protein YP_005277093.1 KEGG: sec:SC0353 hypothetical protein YP_005277094.1 KEGG: efe:EFER_2046 DNA packaging protein gp3 (terminase small subunit) YP_005277095.1 KEGG: efe:EFER_2045 DNA packaging protein gp2 (terminase large subunit) YP_005277096.1 KEGG: efe:EFER_2044 portal protein (protein gp1) YP_005277097.1 KEGG: efe:EFER_2043 scaffolding protein (protein gp8) YP_005277098.1 KEGG: sfv:SFV_0222 putative coat protein YP_005277099.1 KEGG: efe:EFER_2041 hypothetical protein YP_005277100.1 KEGG: sfv:SFV_0224 putative DNA stabilization protein YP_005277101.1 KEGG: sfv:SFV_0225 putative packaged DNA stabilization protein YP_005277102.1 PFAM: Tropomyosin; KEGG: eoj:ECO26_3344 putative head DNA stabilization protein YP_005277103.1 KEGG: eoj:ECO26_3343 putative head assembly protein YP_005277104.1 KEGG: sfv:SFV_0228 putative DNA transfer protein YP_005277105.1 KEGG: sec:SC0363 DNA transfer protein GP20 YP_005277106.1 KEGG: seh:SeHA_C0411 hypothetical protein YP_005277107.1 KEGG: eoj:ECO26_3338 putative transcriptional repressor protein YP_005277108.1 PFAM: P22 tailspike protein head-binding; KEGG: eoi:ECO111_2662 putative tail spike protein YP_005277109.1 PFAM: acyltransferase 3; KEGG: efe:EFER_0626 hypothetical protein YP_005277110.1 PFAM: integrase family protein; KEGG: eoj:ECO26_3335 putative integrase YP_005277111.1 PFAM: formate/nitrite transporter; KEGG: sdy:SDY_2551 putative transport YP_005277112.1 manually curated; KEGG: ebd:ECBD_1310 hypothetical protein YP_005277113.1 PFAM: VacJ family lipoprotein; KEGG: sdy:SDY_2550 lipoprotein precursor YP_005277114.1 KEGG: eoi:ECO111_3092 hypothetical protein YP_005277115.1 PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: ssn:SSON_2400 long-chain fatty acid outer membrane transporter YP_005277116.1 PFAM: Conserved hypothetical protein CHP00743; KEGG: eoh:ECO103_2807 hypothetical protein YP_005277117.1 TIGRFAM: acetyl-CoA C-acyltransferase FadI; acetyl-CoA acetyltransferase; KEGG: eoi:ECO111_3089 3-ketoacyl-CoA thiolase; PFAM: Thiolase-like YP_005277118.1 KEGG: eoh:ECO103_2805 multifunctional fatty acid oxidation complex subunit alpha; TIGRFAM: fatty acid oxidation complex, alpha subunit FadJ; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein YP_005277119.1 KEGG: sbc:SbBS512_E2719 phosphohistidine phosphatase; TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase YP_005277120.1 PFAM: Fimbrial protein domain-containing protein; KEGG: eoh:ECO103_2803 fimbrial-like protein YP_005277121.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: eoh:ECO103_2802 putative outer membrane usher protein YP_005277122.1 PFAM: Pili assembly chaperone, N-terminal; KEGG: eoh:ECO103_2801 putative chaperone YP_005277123.1 KEGG: eoh:ECO103_2800 putative fimbrial protein YP_005277124.1 PFAM: Fimbrial protein domain-containing protein; KEGG: eoh:ECO103_2799 putative fimbrial subunit protein YP_005277125.1 PFAM: Fimbrial protein domain-containing protein; KEGG: ssn:SSON_2391 putative minor fimbrial subunit YP_005277126.1 KEGG: sfv:SFV_2401 hypothetical protein YP_005277127.1 KEGG: sbc:SbBS512_E2709 hypothetical protein; PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2 YP_005277128.1 KEGG: sdy:SDY_2530 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; TIGRFAM: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific; modification methylase, HemK family; PFAM: methyltransferase small YP_005277129.1 TIGRFAM: chorismate synthase; KEGG: ssn:SSON_2387 chorismate synthase; PFAM: chorismate synthase YP_005277130.1 PFAM: peptidase U6 penicillin-insensitive murein endopeptidase; KEGG: sbc:SbBS512_E2706 penicillin-insensitive murein endopeptidase YP_005277131.1 PFAM: protein of unknown function DUF81; KEGG: sbc:SbBS512_E2705 hypothetical protein YP_005277132.1 PFAM: protein of unknown function DUF462; KEGG: eoh:ECO103_2791 hypothetical protein YP_005277133.1 PFAM: YfcL protein; KEGG: sdy:SDY_2524 hypothetical protein YP_005277134.1 manually curated; TIGRFAM: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC; KEGG: eoh:ECO103_2788 5-methylaminomethyl-2-thiouridine methyltransferase; PFAM: protein of unknown function DUF752; FAD dependent oxidoreductase YP_005277135.1 PFAM: Beta-ketoacyl synthase; KEGG: sbo:SBO_2360 3-oxoacyl-(acyl carrier protein) synthase I YP_005277136.1 PFAM: major facilitator superfamily MFS_1; KEGG: eoh:ECO103_2786 hypothetical protein YP_005277137.1 KEGG: sbo:SBO_2358 flagella biosynthesis regulator YP_005277138.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: sbc:SbBS512_E2698 erythronate-4-phosphate dehydrogenase YP_005277139.1 PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding; KEGG: sbc:SbBS512_E2697 putative semialdehyde dehydrogenase; SMART: Semialdehyde dehydrogenase NAD - binding YP_005277140.1 KEGG: sdy:SDY_2517 tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain YP_005277141.1 PFAM: SNARE associated Golgi protein; KEGG: ssn:SSON_2375 hypothetical protein YP_005277142.1 KEGG: efe:EFER_0847 acetyl-CoA carboxylase subunit beta; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: carboxyl transferase YP_005277143.1 KEGG: sfv:SFV_2384 bifunctional folylpolyglutamate synthase/dihydrofolate synthase; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_005277144.1 PFAM: Sporulation domain-containing protein; KEGG: eoh:ECO103_2778 hypothetical protein YP_005277145.1 PFAM: Colicin V production protein; KEGG: eok:G2583_2850 CvpA protein YP_005277146.1 KEGG: sbc:SbBS512_E2690 amidophosphoribosyltransferase; TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase YP_005277147.1 KEGG: sbc:SbBS512_E2689 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: flavoprotein YP_005277148.1 TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: sbc:SbBS512_E2688 lysine-arginine-ornithine-binding periplasmic protein; SMART: extracellular solute-binding protein family 3 YP_005277149.1 TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: sbc:SbBS512_E2687 histidine ABC transporter, periplasmic histidine-binding protein; SMART: extracellular solute-binding protein family 3 YP_005277150.1 KEGG: sdy:SDY_2507 histidine transport system permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_005277151.1 KEGG: sdy:SDY_2506 histidine transport, membrane protein M; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_005277152.1 KEGG: sbc:SbBS512_E2684 histidine/lysine/arginine/ornithine transporter subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_005277153.1 PFAM: transposase YhgA family protein; KEGG: eoi:ECO111_3053 hypothetical protein YP_005277154.1 PFAM: domain of unknown function DUF1731; NAD-dependent epimerase/dehydratase; KEGG: ebd:ECBD_1355 domain of unknown function DUF1731 YP_005277155.1 PFAM: dihydroneopterin aldolase; KEGG: sdy:SDY_2500 D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase YP_005277156.1 PFAM: Glutathione S-transferase domain; KEGG: sbc:SbBS512_E2678 glutathione S-transferase YP_005277157.1 PFAM: Glutathione S-transferase domain; KEGG: eoh:ECO103_2765 putative enzyme YP_005277158.1 KEGG: sbc:SbBS512_E2676 phosphodiesterase; TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase YP_005277159.1 PFAM: NUDIX hydrolase; KEGG: sbc:SbBS512_E2675 hydrolase, NUDIX family protein YP_005277160.1 PFAM: C4-dicarboxylate anaerobic carrier-like; KEGG: eoh:ECO103_2762 hypothetical protein YP_005277161.1 KEGG: sbc:SbBS512_E2673 phosphate acetyltransferase; TIGRFAM: phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase; DRTGG domain protein YP_005277162.1 KEGG: sbc:SbBS512_E2672 acetate kinase; TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase YP_005277163.1 PFAM: protein of unknown function DUF412; KEGG: sdy:SDY_2491 hypothetical protein YP_005277164.1 PFAM: YfbU family protein; KEGG: sdy:SDY_2490 hypothetical protein YP_005277165.1 KEGG: eoh:ECO103_2757 putative phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_005277166.1 PFAM: Citrate transporter; TrkA-C domain protein; KEGG: ssn:SSON_2349 putative transport protein YP_005277167.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: ebd:ECBD_1368 hypothetical protein; SMART: metal-dependent phosphohydrolase HD region YP_005277168.1 PFAM: aminotransferase class I and II; KEGG: sbc:SbBS512_E2666 aminotransferase AlaT YP_005277169.1 manually curated; KEGG: ebd:ECBD_1370 hypothetical protein YP_005277170.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sbc:SbBS512_E2665 transcriptional regulator LrhA YP_005277171.1 KEGG: ebd:ECBD_1372 hypothetical protein YP_005277172.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: sdy:SDY_2484 NADH dehydrogenase subunit A YP_005277173.1 TIGRFAM: NADH-quinone oxidoreductase, B subunit; KEGG: sbc:SbBS512_E2663 NADH dehydrogenase subunit B; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit YP_005277174.1 KEGG: sdy:SDY_2482 bifunctional NADH:ubiquinone oxidoreductase subunit C/D; TIGRFAM: NADH dehydrogenase I, D subunit; NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; NADH dehydrogenase (ubiquinone) 30 kDa subunit YP_005277175.1 KEGG: sbc:SbBS512_E2661 NADH dehydrogenase subunit E; TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit YP_005277176.1 TIGRFAM: NADH-quinone oxidoreductase, F subunit; KEGG: sbc:SbBS512_E2660 NADH dehydrogenase I subunit F; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding YP_005277177.1 KEGG: ssn:SSON_2340 NADH dehydrogenase subunit G; TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region YP_005277178.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: sdy:SDY_2478 NADH dehydrogenase subunit H YP_005277179.1 TIGRFAM: NADH-quinone oxidoreductase, chain I; KEGG: sbc:SbBS512_E2657 NADH dehydrogenase subunit I YP_005277180.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: sdy:SDY_2476 NADH dehydrogenase subunit J YP_005277181.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: cro:ROD_26811 NADH-quinone oxidoreductase chain K YP_005277182.1 KEGG: eok:G2583_2815 NADH-quinone oxidoreductase, L subunit; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein YP_005277183.1 KEGG: ebd:ECBD_1384 NADH dehydrogenase subunit M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_005277184.1 KEGG: ebd:ECBD_1385 NADH dehydrogenase subunit N; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_005277185.1 PFAM: Domain of unknown function DUF1877; KEGG: sdy:SDY_2471 hypothetical protein YP_005277186.1 PFAM: peptidase C48 SUMO/Sentrin/Ubl1; KEGG: eoj:ECO26_3260 deubiquitinase YP_005277187.1 TIGRFAM: ribonuclease BN; ribonuclease Z; KEGG: sbo:SBO_2305 ribonuclease Z YP_005277188.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sbo:SBO_2304 hypothetical protein YP_005277189.1 PFAM: protein of unknown function DUF883 ElaB; KEGG: sdy:SDY_2462 hypothetical protein YP_005277190.1 KEGG: eoi:ECO111_3016 isochorismate synthase 2; TIGRFAM: isochorismate synthase; PFAM: Chorismate binding-like YP_005277191.1 TIGRFAM: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase; KEGG: ebd:ECBD_1394 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylate synthase; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein YP_005277192.1 KEGG: eoi:ECO111_3014 acyl-CoA thioester hydrolase YfbB; PFAM: alpha/beta hydrolase fold YP_005277193.1 KEGG: efe:EFER_0906 naphthoate synthase; TIGRFAM: naphthoate synthase; PFAM: Enoyl-CoA hydratase/isomerase YP_005277194.1 TIGRFAM: o-succinylbenzoic acid (OSB) synthetase; KEGG: eoh:ECO103_2728 O-succinylbenzoate synthase; PFAM: Mandelate racemase/muconate lactonizing protein YP_005277195.1 KEGG: eoi:ECO111_3011 O-succinylbenzoic acid--CoA ligase; TIGRFAM: O-succinylbenzoate-CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_005277196.1 KEGG: sbo:SBO_2296 polymyxin resistance protein B YP_005277197.1 KEGG: sbo:SBO_2295 hypothetical protein YP_005277198.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sbc:SbBS512_E2634 multidrug resistance protein, SMR family YP_005277199.1 PFAM: glycosyl transferase family 39; KEGG: eoi:ECO111_3007 4-amino-4-deoxy-L-arabinose transferase YP_005277200.1 PFAM: polysaccharide deacetylase; KEGG: ssn:SSON_2317 hypothetical protein YP_005277201.1 PFAM: NAD-dependent epimerase/dehydratase; formyl transferase domain protein; KEGG: eok:G2583_2795 bifunctional polymyxin resistance protein ArnA YP_005277202.1 PFAM: glycosyl transferase family 2; KEGG: sbo:SBO_2291 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase YP_005277203.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: ebr:ECB_02179 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase YP_005277204.1 KEGG: sfv:SFV_2322 protein induced by aluminum; manually curated; PFAM: Phosphoglycerate mutase YP_005277205.1 PFAM: NUDIX hydrolase; KEGG: ssn:SSON_2312 hypothetical protein YP_005277206.1 PFAM: YfaZ family protein; KEGG: eoi:ECO111_2999 putative outer membrane porin protein YP_005277207.1 KEGG: eoh:ECO103_2715 competence damage-inducible protein A; TIGRFAM: competence/damage-inducible protein CinA; molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain YP_005277208.1 PFAM: transposase YhgA family protein; KEGG: sbc:SbBS512_E2627 hypothetical protein YP_005277209.1 KEGG: eoh:ECO103_2712 sn-glycerol-3-phosphate dehydrogenase subunit C; TIGRFAM: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein YP_005277210.1 TIGRFAM: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit; KEGG: ssn:SSON_2303 anaerobic glycerol-3-phosphate dehydrogenase subunit B; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_005277211.1 KEGG: sbc:SbBS512_E2623 sn-glycerol-3-phosphate dehydrogenase subunit A; TIGRFAM: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit; PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein YP_005277212.1 KEGG: sfx:S2455 sn-glycerol-3-phosphate transporter; TIGRFAM: glycerol-3-phosphate transporter; phosphoglycerate transporter; PFAM: major facilitator superfamily MFS_1 YP_005277213.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: eok:G2583_2779 glycerophosphoryl diester phosphodiesterase YP_005277214.1 KEGG: sfv:SFV_2310 hypothetical protein YP_005277215.1 PFAM: ferredoxin; KEGG: sbc:SbBS512_E2616 2Fe-2S ferredoxin YfaE YP_005277216.1 KEGG: ssn:SSON_2294 ribonucleotide-diphosphate reductase subunit beta; PFAM: ribonucleotide reductase YP_005277217.1 KEGG: eoh:ECO103_2703 ribonucleotide-diphosphate reductase subunit alpha; TIGRFAM: ribonucleoside-diphosphate reductase, alpha subunit; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit domain protein; ATP-cone domain protein YP_005277218.1 KEGG: eoh:ECO103_2702 adhesin; TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; polymorphic outer membrane protein; PFAM: Autotransporter beta- domain protein; Pertactin; Polymorphic membrane protein Chlamydia YP_005277219.1 TIGRFAM: ubiquinone biosynthesis O-methyltransferase; KEGG: sbc:SbBS512_E2607 3-demethylubiquinone-9 3-methyltransferase; PFAM: Methyltransferase type 11 YP_005277220.1 SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA gyrase, A subunit; KEGG: sbc:SbBS512_E2606 DNA gyrase subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller YP_005277221.1 PFAM: Protein of unknown function DUF2138; KEGG: ebw:BWG_2002 hypothetical protein YP_005277222.1 PFAM: protein of unknown function DUF1175; KEGG: eoh:ECO103_2698 hypothetical protein YP_005277223.1 KEGG: eoj:ECO26_3148 alpha-2-macroglobulin family protein; manually curated; PFAM: alpha-2-macroglobulin domain protein; alpha-2-macroglobulin domain protein 2 YP_005277224.1 PFAM: Protein of unknown function DUF2300, secreted; KEGG: ssn:SSON_2285 hypothetical protein YP_005277225.1 PFAM: Protein of unknown function DUF2135; KEGG: eoh:ECO103_2695 hypothetical protein YP_005277226.1 KEGG: ssn:SSON_2277 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; PFAM: Signal transduction histidine kinase RcsC, alpha-beta loop-like; ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver YP_005277227.1 KEGG: cko:CKO_00553 transcriptional regulator RcsB; PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver YP_005277228.1 KEGG: eoj:ECO26_3143 phosphotransfer intermediate protein in two-component regulatory system with RcsBC; PFAM: Hpt domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_005277229.1 PFAM: porin Gram-negative type; KEGG: eoh:ECO103_2691 outer membrane porin protein C YP_005277230.1 PFAM: ApbE family lipoprotein; KEGG: sbo:SBO_2093 thiamine biosynthesis lipoprotein ApbE YP_005277231.1 TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; Ada metal-binding domain-containing protein; helix-turn-helix- domain containing protein AraC type; methylguanine DNA methyltransferase ribonuclease domain protein; KEGG: ebw:BWG_1987 fused DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase; SMART: Helix-turn-helix, AraC domain YP_005277232.1 KEGG: eoi:ECO111_2949 oxidative demethylase AlkB; TIGRFAM: alkylated DNA repair protein AlkB; PFAM: 2OG-Fe(II) oxygenase YP_005277233.1 TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; KEGG: eoh:ECO103_2687 multidrug transporter membrane component/ATP-binding component; SMART: AAA ATPase YP_005277234.1 TIGRFAM: malate/quinone oxidoreductase; KEGG: eoj:ECO26_3137 malate:quinone oxidoreductase; PFAM: Malate:quinone-oxidoreductase YP_005277235.1 PFAM: proteinase inhibitor I11 ecotin; KEGG: eoi:ECO111_2946 ecotin YP_005277236.1 KEGG: sbc:SbBS512_E0732 hypothetical protein YP_005277237.1 TIGRFAM: ferredoxin-type protein NapF; KEGG: efe:EFER_2298 ferredoxin-type protein YP_005277238.1 PFAM: NapD family protein; KEGG: sbc:SbBS512_E0734 assembly protein for periplasmic nitrate reductase YP_005277239.1 KEGG: ssn:SSON_2264 nitrate reductase catalytic subunit; TIGRFAM: periplasmic nitrate reductase, large subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; Twin-arginine translocation pathway, signal sequence, subgroup; molydopterin dinucleotide-binding region YP_005277240.1 TIGRFAM: MauM/NapG family ferredoxin-type protein; KEGG: sdy:SDY_0873 quinol dehydrogenase periplasmic component YP_005277241.1 TIGRFAM: ferredoxin-type protein, NapH/MauN family; KEGG: eoh:ECO103_2679 quinol dehydrogenase membrane component YP_005277242.1 PFAM: Nitrate reductase cytochrome c-type subunit (NapB); KEGG: sbc:SbBS512_E0738 citrate reductase cytochrome c-type subunit YP_005277243.1 KEGG: sbc:SbBS512_E0739 cytochrome c-type protein NapC; TIGRFAM: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family; PFAM: NapC/NirT cytochrome c domain protein YP_005277244.1 TIGRFAM: heme exporter protein CcmA; PFAM: ABC transporter related; KEGG: sbc:SbBS512_E0740 cytochrome c biogenesis protein CcmA; SMART: AAA ATPase YP_005277245.1 KEGG: sdy:SDY_0878 heme exporter protein B; TIGRFAM: heme exporter protein CcmB; PFAM: cytochrome c-type biogenesis protein CcmB YP_005277246.1 KEGG: sdy:SDY_0879 heme exporter protein C; TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein YP_005277247.1 KEGG: sdy:SDY_0880 heme exporter protein C; TIGRFAM: heme exporter protein CcmD; PFAM: Heme exporter protein D (CcmD) YP_005277248.1 PFAM: CcmE/CycJ protein; KEGG: sdy:SDY_0881 cytochrome c-type biogenesis protein CcmE YP_005277249.1 KEGG: ebd:ECBD_1464 cytochrome c assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein YP_005277250.1 KEGG: sbc:SbBS512_E0746 thiol:disulfide interchange protein DsbE; TIGRFAM: periplasmic protein thiol/disulphide oxidoreductase DsbE; PFAM: Redoxin domain protein YP_005277251.1 PFAM: cytochrome C biogenesis protein; KEGG: eoh:ECO103_2669 heme lyase, CcmH subunit YP_005277252.1 KEGG: sdy:SDY_0885 transcriptional regulator NarP; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_005277253.1 PFAM: sulfatase; KEGG: eoh:ECO103_2665 putative hydrolase, inner membrane YP_005277254.1 PFAM: protein of unknown function DUF1414; KEGG: sbc:SbBS512_E0770 hypothetical protein YP_005277255.1 PFAM: 37kDa nucleoid-associated protein; KEGG: sdy:SDY_0893 nucleoid-associated protein NdpA YP_005277256.1 PFAM: Ribosomal protein L25-like; KEGG: sdy:SDY_0894 50S ribosomal protein L25 YP_005277257.1 KEGG: sbc:SbBS512_E0774 putative helicase; PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_005277258.1 KEGG: sbo:SBO_2141 16S rRNA pseudouridylate synthase A; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_005277259.1 KEGG: ebd:ECBD_1475 bicyclomycin/multidrug efflux system; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; multidrug/H+ antiporter, major facilitator superfamily (MFS); PFAM: major facilitator superfamily MFS_1 YP_005277260.1 KEGG: sdy:SDY_0898 hypothetical protein YP_005277261.1 KEGG: eoh:ECO103_2657 fused putative oligopeptide transporter subunits of ABC superfamilly: ATP-binding components; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_005277262.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbo:SBO_2145 putative transport system permease protein YP_005277263.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ssn:SSON_2234 putative transport system permease protein YP_005277264.1 PFAM: extracellular solute-binding protein family 5; KEGG: ebd:ECBD_1480 extracellular solute-binding protein family 5 YP_005277265.1 KEGG: eoh:ECO103_2653 hypothetical protein; PFAM: EAL domain protein; SMART: EAL domain protein YP_005277266.1 PFAM: NLP/P60 protein; KEGG: sdy:SDY_0904 putative outer membrane lipoprotein YP_005277267.1 KEGG: eoh:ECO103_2651 undecaprenyl pyrophosphate phosphatase; PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related YP_005277268.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: sbc:SbBS512_E0785 CobW/P47K family protein YP_005277269.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: eoj:ECO26_3085 putative dehydrogenase, NAD-dependent YP_005277270.1 KEGG: sdy:SDY_0908 elongation factor P; TIGRFAM: elongation factor P-like protein YeiP; PFAM: Elongation factor P/YeiP protein; Elongation factor KOW-like domain-containing protein; Elongation factor P YP_005277271.1 PFAM: protein of unknown function UPF0153; KEGG: ebd:ECBD_1487 protein of unknown function UPF0153 YP_005277272.1 KEGG: eoj:ECO26_3082 lactose/glucose efflux system protein SetB; TIGRFAM: sugar efflux transporter; PFAM: major facilitator superfamily MFS_1 YP_005277273.1 KEGG: eoi:ECO111_2887 bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphoryl transfer system HPr YP_005277274.1 KEGG: sdy:SDY_2316 1-phosphofructokinase; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein YP_005277275.1 TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose-specific, IIB subunnit; KEGG: eoi:ECO111_2885 PTS system fructose-specific transporter subunits IIBC; PFAM: phosphotransferase system EIIC YP_005277276.1 PFAM: PfkB domain protein; KEGG: eoh:ECO103_2641 hypothetical protein YP_005277277.1 PFAM: Indigoidine synthase A family protein; KEGG: eoi:ECO111_2883 hypothetical protein YP_005277278.1 KEGG: sbc:SbBS512_E0801 nucleoside transporter, NupC family; TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter domain protein; Na+ dependent nucleoside transporter; nucleoside recognition domain protein YP_005277279.1 KEGG: eok:G2583_2706 DNA-binding transcriptional activator of stationary phase nitrogen survival; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding YP_005277280.1 KEGG: eoi:ECO111_2880 ribonucleoside hydrolase 2; PFAM: Inosine/uridine-preferring nucleoside hydrolase YP_005277281.1 KEGG: sdy:SDY_2105 putative transport system permease protein; TIGRFAM: nucleoside transporter; PFAM: Na+ dependent nucleoside transporter domain protein; Na+ dependent nucleoside transporter; nucleoside recognition domain protein YP_005277282.1 PFAM: PfkB domain protein; KEGG: eok:G2583_2703 kinase, PfkB family YP_005277283.1 SMART: AP endonuclease family 2; TIGRFAM: apurinic endonuclease Apn1; KEGG: sbo:SBO_2168 endonuclease IV; PFAM: Xylose isomerase domain-containing protein TIM barrel YP_005277284.1 PFAM: Uncharacterised protein family UPF0324; KEGG: sbo:SBO_2169 hypothetical protein YP_005277285.1 KEGG: ssn:SSON_2213 putative DNA-binding transcriptional regulator; manually curated; PFAM: LysR substrate-binding; regulatory protein LysR YP_005277286.1 PFAM: amino acid permease-associated region; KEGG: sdy:SDY_2110 lysine transporter YP_005277287.1 PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: stm:STM2199 ligand-binding site; other site YP_005277288.1 TIGRFAM: S-formylglutathione hydrolase; KEGG: sbc:SbBS512_E0812 S-formylglutathione hydrolase; PFAM: esterase YP_005277289.1 TIGRFAM: GTP cyclohydrolase I; KEGG: sdy:SDY_2127 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase YP_005277290.1 PFAM: protein of unknown function DUF418; KEGG: ebd:ECBD_1506 hypothetical protein YP_005277291.1 KEGG: eoj:ECO26_3063 DNA-binding transcriptional regulator GalS; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_005277292.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sdy:SDY_2130 galactose-binding transport protein YP_005277293.1 KEGG: ssn:SSON_2205 galactose/methyl galaxtoside transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_005277294.1 PFAM: inner-membrane translocator; KEGG: sbc:SbBS512_E0823 beta-methylgalactoside transporter inner membrane component YP_005277295.1 TIGRFAM: dihydroorotate dehydrogenase family protein; KEGG: eoi:ECO111_2864 dihydropyrimidine dehydrogenase; PFAM: dihydroorotate oxidase YP_005277296.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: eok:G2583_2689 hypothetical protein YP_005277297.1 KEGG: sbc:SbBS512_E0826 hypothetical protein YP_005277298.1 PFAM: protein of unknown function DUF218; KEGG: sdy:SDY_2143 hypothetical protein YP_005277299.1 TIGRFAM: cytidine deaminase; KEGG: sbc:SbBS512_E0828 cytidine deaminase; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding domain protein; CMP/dCMP deaminase zinc-binding YP_005277300.1 PFAM: LrgB family protein; KEGG: sbc:SbBS512_E0829 hypothetical protein YP_005277301.1 PFAM: LrgA family protein; KEGG: sbo:SBO_1000 hypothetical protein YP_005277302.1 PFAM: dihydrouridine synthase DuS; KEGG: eoh:ECO103_2615 tRNA-dihydrouridine synthase C YP_005277303.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: eoh:ECO103_2613 acetoin dehydrogenase YP_005277304.1 PFAM: SNARE associated Golgi protein; KEGG: sbc:SbBS512_E0835 hypothetical protein YP_005277305.1 PFAM: protein of unknown function DUF1282; KEGG: sbo:SBO_1009 hypothetical protein YP_005277306.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: ssn:SSON_2191 D-alanyl-D-alanine endopeptidase YP_005277307.1 KEGG: sbc:SbBS512_E0839 D-lactate dehydrogenase; PFAM: D-lactate dehydrogenase membrane binding ; FAD linked oxidase domain protein YP_005277308.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: eoh:ECO103_2608 beta-D-glucoside glucohydrolase, periplasmic YP_005277309.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: ebd:ECBD_1527 substrate-binding region of ABC-type glycine betaine transport system YP_005277310.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbo:SBO_1014 putative transport system permease protein YP_005277311.1 KEGG: ssn:SSON_2186 putative ATP-binding component of a transport system; PFAM: ABC transporter related; CBS domain containing protein; SMART: AAA ATPase YP_005277312.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbc:SbBS512_E0845 ABC transporter, quaternary amine uptake (QAT) family, permease protein YP_005277313.1 KEGG: sdy:SDY_2161 hypothetical protein YP_005277314.1 KEGG: eok:G2583_2664 DNA-binding transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR YP_005277315.1 KEGG: sfx:S2325 putative 2-component sensor protein; PFAM: histidine kinase internal region; 5TM Receptors of the LytS-YhcK type transmembrane region; GAF domain protein; ATP-binding region ATPase domain protein; SMART: GAF domain protein YP_005277316.1 KEGG: sbo:SBO_0948 putative two-component response-regulatory protein YehT; PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver YP_005277317.1 PFAM: protein of unknown function DUF1456; KEGG: ebw:BWG_1907 hypothetical protein YP_005277318.1 PFAM: protein of unknown function DUF1307; KEGG: ssn:SSON_2169 hypothetical protein YP_005277319.1 KEGG: ebd:ECBD_1537 zinc finger SWIM domain protein YP_005277320.1 KEGG: ebd:ECBD_1538 VWA containing CoxE family protein; PFAM: VWA containing CoxE family protein; SMART: von Willebrand factor type A YP_005277321.1 KEGG: eoi:ECO111_2837 hypothetical protein YP_005277322.1 KEGG: eoi:ECO111_2836 putative transporter subunit; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_005277323.1 KEGG: eoh:ECO103_2593 hypothetical protein YP_005277324.1 KEGG: eoh:ECO103_2592 hypothetical protein YP_005277325.1 KEGG: eoh:ECO103_2591 hypothetical protein; PFAM: WGR domain-containing protein; SMART: WGR domain-containing protein YP_005277326.1 KEGG: eoh:ECO103_2590 methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase class I (M); t-RNA-binding domain-containing protein YP_005277327.1 PFAM: ATPase-like, ParA/MinD; KEGG: sbc:SbBS512_E0855 putative ATPase YP_005277328.1 KEGG: eoh:ECO103_2588 hypothetical protein YP_005277329.1 PFAM: Fimbrial protein domain-containing protein; KEGG: ssn:SSON_2160 putative fimbrial-like protein YP_005277330.1 PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: eoi:ECO111_2826 putative chaperone YP_005277331.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: eoi:ECO111_2825 putative outer membrane protein YP_005277332.1 KEGG: eok:G2583_2644 putative fimbrial-like adhesin protein YP_005277333.1 KEGG: sbc:SbBS512_E0850 hypothetical protein YP_005277334.1 PFAM: high-affinity nickel-transporter; KEGG: eok:G2583_2642 nickel/cobalt efflux system RcnA YP_005277335.1 PFAM: protein of unknown function DUF156; KEGG: sdy:SDY_2279 hypothetical protein YP_005277336.1 KEGG: eoh:ECO103_2580 hydroxyethylthiazole kinase; PFAM: hydroxyethylthiazole kinase YP_005277337.1 TIGRFAM: phosphomethylpyrimidine kinase; KEGG: sbc:SbBS512_E1135 phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1 YP_005277338.1 PFAM: glycoside hydrolase family 25; KEGG: eoj:ECO26_3011 putative hydrolase; SMART: Glycoside hydrolase, family 25 subgroup YP_005277339.1 KEGG: sdy:SDY_2274 putative transcriptional regulator; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_005277340.1 PFAM: PfkB domain protein; KEGG: eoi:ECO111_2816 putative kinase YP_005277341.1 PFAM: ADP-ribosylation/Crystallin J1; KEGG: ssn:SSON_2147 hypothetical protein YP_005277342.1 TIGRFAM: nucleoside transporter; KEGG: eoi:ECO111_2814 putative nucleoside transporter YP_005277343.1 PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: sdy:SDY_2270 fructose-bisphosphate aldolase YP_005277344.1 TIGRFAM: class II aldolase, tagatose bisphosphate family; ketose-bisphosphate aldolase; KEGG: sbc:SbBS512_E1142 tagatose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II YP_005277345.1 KEGG: eoh:ECO103_2569 D-tagatose 1,6-bisphosphate aldolase 2 subunit GatZ; TIGRFAM: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit; PFAM: D-tagatose-bisphosphate aldolase class II accessory protein AgaZ YP_005277346.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: eoh:ECO103_2568 PTS system galactitol-specific transporter subunit IIA YP_005277347.1 KEGG: sfv:SFV_2148 PTS system galactitol-specific transporter subunit IIB; PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit YP_005277348.1 KEGG: eoh:ECO103_2566 galactitol-specific enzyme IIC component of PTS; TIGRFAM: PTS system, galactitol-specific IIC subunit; PFAM: PTS system Galactitol-specific IIC component YP_005277349.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: ebd:ECBD_1566 galactitol-1-phosphate dehydrogenase YP_005277350.1 KEGG: ssn:SSON_2137 galactitol utilization operon repressor; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_005277351.1 KEGG: eoh:ECO103_2563 lipid kinase; PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region YP_005277352.1 KEGG: ssn:SSON_2135 hypothetical protein YP_005277353.1 PFAM: integrase family protein; KEGG: etw:ECSP_2882 integrase YP_005277354.1 SMART: helix-turn-helix domain protein; KEGG: ebr:ECB_02011 bacteriophage P2 C-like protein YP_005277355.1 PFAM: Regulatory phage protein Cox; KEGG: ebr:ECB_02010 bacteriophage P2 Cox-like protein YP_005277356.1 KEGG: etw:ECSP_2879 hypothetical protein YP_005277357.1 KEGG: etw:ECSP_2878 replication gene B protein YP_005277358.1 KEGG: etw:ECSP_2877 hypothetical protein YP_005277359.1 KEGG: ebr:ECB_02007 hypothetical protein YP_005277360.1 TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; KEGG: ebr:ECB_02006 hypothetical protein YP_005277361.1 KEGG: ebr:ECB_02005 hypothetical protein YP_005277362.1 PFAM: replication gene A; KEGG: etw:ECSP_2873 phage replication initiation protein YP_005277364.1 KEGG: ctu:Ctu_32430 hypothetical protein YP_005277365.1 KEGG: ctu:Ctu_32420 hypothetical protein YP_005277366.1 KEGG: etw:ECSP_2868 phage capsid protein; TIGRFAM: phage portal protein, PBSX family; PFAM: portal protein YP_005277367.1 manually curated; KEGG: etw:ECSP_2867 phage large terminase subunit GpP YP_005277368.1 PFAM: capsid scaffolding; KEGG: etw:ECSP_2866 phage capsid scaffolding protein GpO YP_005277369.1 KEGG: etw:ECSP_2865 phage major capsid protein, P2 family; TIGRFAM: phage major capsid protein, P2 family; PFAM: major capsid protein P2 YP_005277370.1 PFAM: small terminase subunit; KEGG: etw:ECSP_2864 small terminase subunit YP_005277371.1 KEGG: etw:ECSP_2863 capsid completion protein; manually curated; PFAM: head completion protein YP_005277372.1 PFAM: tail X family protein; KEGG: etw:ECSP_2862 P2-like prophage tail protein X YP_005277373.1 PFAM: holin family 2; KEGG: etw:ECSP_2861 hypothetical protein YP_005277374.1 KEGG: etw:ECSP_2860 phage lysozyme; PFAM: glycoside hydrolase family 24 YP_005277375.1 KEGG: etw:ECSP_2859 phage lysis protein LysA YP_005277376.1 TIGRFAM: phage lysis regulatory protein, LysB family; KEGG: etw:ECSP_2858 phage lysis timing protein LysB YP_005277377.1 KEGG: etw:ECSP_2857 phage lysis protein LysC YP_005277378.1 KEGG: etw:ECSP_2856 P2 phage tail completion protein R, GpR YP_005277379.1 TIGRFAM: phage virion morphogenesis protein; KEGG: etw:ECSP_2855 phage tail protein YP_005277380.1 TIGRFAM: phage baseplate assembly protein V; KEGG: ebr:ECB_01998 hypothetical protein YP_005277381.1 PFAM: GPW/gp25 family protein; KEGG: etw:ECSP_2853 phage baseplate protein YP_005277382.1 PFAM: Baseplate J family protein; KEGG: etw:ECSP_2852 baseplate assembly protein YP_005277383.1 TIGRFAM: phage tail protein I; KEGG: etw:ECSP_2851 phage P2-related tail formation protein YP_005277384.1 PFAM: Tail Collar domain protein; KEGG: etw:ECSP_2850 phage tail fiber protein YP_005277385.1 PFAM: tail assembly chaperone gp38; KEGG: etw:ECSP_0289 hypothetical protein YP_005277386.1 PFAM: tail assembly chaperone gp38; KEGG: ebw:BWG_2124 CPS-53 (KpLE1) prophage; hypothetical protein YP_005277387.1 PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: etw:ECSP_2846 DNA-invertase YP_005277388.1 KEGG: etw:ECSP_2845 phage tail sheath protein FI YP_005277389.1 KEGG: etw:ECSP_2844 phage tail tube protein FII; TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein YP_005277390.1 KEGG: etw:ECSP_2842 phage related tail protein; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region YP_005277391.1 PFAM: P2 GpU family protein; KEGG: etw:ECSP_2841 phage protein gpU YP_005277392.1 KEGG: etw:ECSP_2840 phage protein D YP_005277393.1 KEGG: etw:ECSP_2839 DNA-binding transcriptional regulator; manually curated; PFAM: transcriptional activator Ogr/delta YP_005277394.1 PFAM: peptidase U32; KEGG: sbc:SbBS512_E1150 peptidase, U32 family YP_005277395.1 PFAM: plasmid stabilization system; KEGG: sbc:SbBS512_E1151 RelE/ParE family plasmid stabilization system protein YP_005277396.1 TIGRFAM: addiction module antidote protein, CC2985 family; KEGG: sdy:SDY_2257 hypothetical protein YP_005277397.1 PFAM: protein of unknown function DUF1508; KEGG: sbc:SbBS512_E1153 hypothetical protein YP_005277398.1 KEGG: sbc:SbBS512_E1154 DNA-binding transcriptional regulator BaeR; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_005277399.1 KEGG: ebd:ECBD_1575 signal transduction histidine-protein kinase BaeS; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_005277400.1 PFAM: major facilitator superfamily MFS_1; KEGG: eoh:ECO103_2555 multidrug efflux system protein MdtE YP_005277401.1 PFAM: acriflavin resistance protein; KEGG: efe:EFER_2163 multidrug efflux system subunit MdtC YP_005277402.1 PFAM: acriflavin resistance protein; KEGG: ebw:BWG_1865 multidrug efflux system subunit MdtB YP_005277403.1 KEGG: sbc:SbBS512_E1159 multidrug efflux system subunit MdtA; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_005277404.1 KEGG: sbc:SbBS512_E1160 von Willebrand factor type A domain protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A YP_005277405.1 manually curated; KEGG: sfx:S2261 hypothetical protein YP_005277406.1 KEGG: ebw:BWG_1861 hypothetical protein YP_005277407.1 KEGG: ebw:BWG_1860 hypothetical protein YP_005277408.1 KEGG: eoh:ECO103_2548 putative chaperone YP_005277409.1 KEGG: eoj:ECO26_2980 3-methyl-adenine DNA glycosylase II; PFAM: AlkA domain protein; HhH-GPD family protein; SMART: HhH-GPD family protein YP_005277410.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; MASE1 domain protein; PAS fold domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; EAL domain protein; KEGG: eoh:ECO103_2546 putative sensor protein; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein; EAL domain protein YP_005277411.1 TIGRFAM: uridine kinase; KEGG: sdy:SDY_2196 uridine kinase YP_005277412.1 KEGG: sbc:SbBS512_E1167 deoxycytidine triphosphate deaminase; TIGRFAM: deoxycytidine triphosphate deaminase; PFAM: deoxyUTP pyrophosphatase YP_005277413.1 PFAM: AsmA family protein; KEGG: eoj:ECO26_2975 putative assembly protein YP_005277414.1 KEGG: sdy:SDY_2199 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_005277415.1 PFAM: protein of unknown function DUF891; KEGG: eok:G2583_2587 hypothetical protein YP_005277416.1 PFAM: Integral membrane protein TerC; CBS domain containing protein; transporter-associated region; KEGG: sfv:SFV_2122 putative transport protein YP_005277417.1 PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: sbc:SbBS512_E1170 polysaccharide biosynthesis/export protein YP_005277418.1 KEGG: sbc:SbBS512_E1171 tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight YP_005277419.1 TIGRFAM: capsular exopolysaccharide family; KEGG: eoh:ECO103_2539 tyrosine kinase; PFAM: lipopolysaccharide biosynthesis protein YP_005277420.1 PFAM: glycosyl transferase family 2; KEGG: sbo:SBO_0886 putative glycosyl transferase YP_005277421.1 KEGG: ssn:SSON_2111 putative colanic acid biosynthesis acetyltransferase WcaB YP_005277422.1 PFAM: glycosyl transferase group 1; KEGG: sfv:SFV_2116 putative glycosyl transferase YP_005277423.1 KEGG: sbc:SbBS512_E1176 putative colanic acid biosynthesis protein YP_005277424.1 PFAM: glycosyl transferase family 2; KEGG: ebd:ECBD_1600 putative glycosyl transferase YP_005277425.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: eok:G2583_2577 putative acyl transferase WcaF YP_005277426.1 KEGG: sbc:SbBS512_E1179 GDP-mannose 4,6-dehydratase; TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_005277427.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: ssn:SSON_2105 putative nucleotide di-P-sugar epimerase or dehydratase YP_005277428.1 PFAM: NUDIX hydrolase; KEGG: ebd:ECBD_1604 NUDIX hydrolase YP_005277429.1 PFAM: glycosyl transferase group 1; KEGG: etw:ECSP_2805 putative glycosyl transferase YP_005277430.1 TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: eoj:ECO26_2960 mannose-1-phosphate guanyltransferase CpsB; PFAM: Nucleotidyl transferase; mannose-6-phosphate isomerase type II YP_005277431.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: efe:EFER_2132 phosphomannomutase YP_005277432.1 TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: sbo:SBO_0874 putative UDP-glucose lipid carrier transferase; PFAM: sugar transferase YP_005277433.1 PFAM: polysaccharide biosynthesis protein; KEGG: eoh:ECO103_2525 colanic acid exporter YP_005277434.1 manually curated; KEGG: sfv:SFV_2308 ribonucleotide-diphosphate reductase subunit beta YP_005277435.1 KEGG: sbo:SBO_0872 putative pyruvyl transferase YP_005277436.1 PFAM: glycosyl transferase group 1; KEGG: ebw:BWG_1834 putative glycosyl transferase YP_005277437.1 KEGG: sbo:SBO_0870 putative colanic acid biosynthesis protein YP_005277438.1 KEGG: eoh:ECO103_2521 UTP--glucose-1-phosphate uridylyltransferase subunit GalF; TIGRFAM: regulatory protein GalF; PFAM: Nucleotidyl transferase YP_005277439.1 PFAM: polysaccharide biosynthesis protein; KEGG: bcl:ABC3687 O-antigen transporter YP_005277440.1 KEGG: tal:Thal_0139 hypothetical protein YP_005277441.1 PFAM: glycosyl transferase family 2; KEGG: abu:Abu_1811 glycosyltransferase YP_005277442.1 PFAM: glycosyl transferase group 1; KEGG: ttm:Tthe_2417 glycogen synthase YP_005277443.1 KEGG: trq:TRQ2_0297 glycosyl transferase group 1 YP_005277444.1 KEGG: hsm:HSM_1256 UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_005277445.1 PFAM: glycosyl transferase group 1; KEGG: sec:SC2095 hypothetical protein YP_005277446.1 TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; KEGG: enc:ECL_03372 mannose-1-phosphate guanylyltransferase (GDP); PFAM: Nucleotidyl transferase; mannose-6-phosphate isomerase type II YP_005277447.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: ssn:SSON_2101 phosphomannomutase YP_005277448.1 KEGG: eoh:ECO103_2508 6-phosphogluconate dehydrogenase; TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase domain-containing protein; 6-phosphogluconate dehydrogenase NAD-binding YP_005277449.1 TIGRFAM: nucleotide sugar dehydrogenase; KEGG: ebd:ECBD_1631 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase ; UDP-glucose/GDP-mannose dehydrogenase dimerisation YP_005277450.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: ssn:SSON_2098 regulator of length of O-antigen component of lipopolysaccharide chains YP_005277451.1 KEGG: ssn:SSON_2097 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase-like; phosphoribosyl-AMP cyclohydrolase YP_005277452.1 KEGG: eoh:ECO103_2504 imidazole glycerol phosphate synthase subunit HisF; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein YP_005277453.1 KEGG: sdy:SDY_2217 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein YP_005277454.1 KEGG: sdy:SDY_2218 imidazole glycerol phosphate synthase subunit HisH; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I YP_005277455.1 TIGRFAM: histidinol-phosphatase; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: efe:EFER_2105 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; PFAM: imidazoleglycerol-phosphate dehydratase YP_005277456.1 KEGG: ebw:BWG_1812 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II YP_005277457.1 TIGRFAM: histidinol dehydrogenase; KEGG: efe:EFER_2103 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase YP_005277458.1 TIGRFAM: ATP phosphoribosyltransferase; KEGG: sbc:SbBS512_E1213 ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region; Histidine biosynthesis protein HisG domain YP_005277459.1 TIGRFAM: prevent-host-death family protein; KEGG: sbc:SbBS512_E1214 antitoxin YefM YP_005277460.1 KEGG: sbc:SbBS512_E1215 toxin YoeB; TIGRFAM: addiction module toxin, Txe/YoeB family; PFAM: Addiction module toxin Txe/YoeB YP_005277461.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: sbo:SBO_0842 putative enzyme of sugar metabolism YP_005277462.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sbc:SbBS512_E1217 transcriptional regulator, LysR family YP_005277463.1 PFAM: amino acid permease-associated region; KEGG: sdy:SDY_2226 putative amino acid/amine transport protein YP_005277464.1 KEGG: eoh:ECO103_2491 putative inner membrane protein; manually curated; PFAM: protein of unknown function DUF395 YeeE/YedE YP_005277465.1 PFAM: SirA-like domain-containing protein; KEGG: sbc:SbBS512_E1220 hypothetical protein YP_005277466.1 PFAM: Exonuclease domain protein; Exonuclease RNase T and DNA polymerase III; KEGG: eoh:ECO103_2489 exonuclease I; SMART: Exonuclease YP_005277467.1 KEGG: eok:G2583_2530 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein YP_005277468.1 PFAM: transcription activator effector binding; KEGG: sbc:SbBS512_E1226 DNA gyrase inhibitor YP_005277469.1 KEGG: eoh:ECO103_2486 hypothetical protein YP_005277470.1 PFAM: protein of unknown function DUF496; KEGG: sbc:SbBS512_E1230 hypothetical protein YP_005277471.1 KEGG: sdy:SDY_2240 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase; PFAM: cobalbumin biosynthesis protein YP_005277472.1 KEGG: sbc:SbBS512_E0966 cobalamin synthase; TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS YP_005277473.1 TIGRFAM: nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; KEGG: eoh:ECO103_2452 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase YP_005277474.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: eoj:ECO26_2880 hypothetical protein YP_005277475.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eoh:ECO103_2450 nitrogen assimilation transcriptional regulator YP_005277476.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ssn:SSON_2042 transcriptional regulator Cbl YP_005277477.1 KEGG: eoh:ECO103_2448 hypothetical protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_005277478.1 PFAM: protein of unknown function DUF28; KEGG: sbc:SbBS512_E0985 hypothetical protein YP_005277479.1 TIGRFAM: AMP nucleosidase; KEGG: ebd:ECBD_1664 AMP nucleosidase; PFAM: AMP nucleoside phosphorylase-like; purine or other phosphorylase family 1 YP_005277480.1 KEGG: eoh:ECO103_2445 shikimate transporter; TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: major facilitator superfamily MFS_1 YP_005277481.1 PFAM: glycosyl transferase family 9; KEGG: eoh:ECO103_2444 putative ADP-heptose:LPS heptosyl transferase YP_005277482.1 KEGG: ebd:ECBD_1668 hypothetical protein YP_005277483.1 PFAM: protein of unknown function DUF980; KEGG: eoh:ECO103_2437 hypothetical protein YP_005277484.1 KEGG: sbo:SBO_1032 putative cytochrome YP_005277485.1 KEGG: ebr:ECB_01888 hypothetical protein; manually curated; PFAM: YodA domain-containing protein YP_005277486.1 PFAM: Ferric reductase domain protein transmembrane component domain; KEGG: sbc:SbBS512_E0911 putative sulfite oxidase subunit YedZ YP_005277487.1 PFAM: oxidoreductase molybdopterin binding; KEGG: sbc:SbBS512_E0912 putative sulfite oxidase subunit YedY YP_005277488.1 SMART: Transthyretin; TIGRFAM: hydroxyisourate hydrolase; KEGG: sfv:SFV_2015 hypothetical protein; PFAM: Transthyretin YP_005277489.1 TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; KEGG: eok:G2583_2419 heavy metal response regulator; SMART: response regulator receiver YP_005277490.1 TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: eoh:ECO103_2216 putative sensory kinase in two-component regulatory system with YedW; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_005277491.1 PFAM: ThiJ/PfpI domain-containing protein; KEGG: sbc:SbBS512_E0916 chaperone protein HchA YP_005277492.1 PFAM: porin Gram-negative type; KEGG: eoh:ECO103_2214 putative outer membrane porin protein YP_005277493.1 KEGG: sbo:SBO_1045 hypothetical protein YP_005277494.1 KEGG: eoh:ECO103_2212 hypothetical protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_005277495.1 TIGRFAM: DNA-cytosine methyltransferase; KEGG: ebd:ECBD_1685 DNA cytosine methylase; PFAM: C-5 cytosine-specific DNA methylase YP_005277496.1 KEGG: eoh:ECO103_2210 DNA mismatch endonuclease Vsr of very short patch repair; TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr YP_005277497.1 KEGG: ebd:ECBD_1687 hypothetical protein; TIGRFAM: carboxylate/amino acid/amine transporter; PFAM: protein of unknown function DUF6 transmembrane YP_005277498.1 PFAM: protein of unknown function DUF808; KEGG: sbc:SbBS512_E1080 hypothetical protein YP_005277499.1 PFAM: Protein of unknown function DUF2158; KEGG: sdy:SDY_1049 hypothetical protein YP_005277500.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: eoh:ECO103_2206 putative diguanylate cyclase; SMART: GGDEF domain containing protein YP_005277501.1 TIGRFAM: mannosyl-3-phosphoglycerate phosphatase family protein; mannosyl-3-phosphoglycerate phosphatase family; HAD-superfamily hydrolase, subfamily IIB; KEGG: eoh:ECO103_2205 mannosyl-3-phosphoglycerate phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_005277502.1 PFAM: Protein of unknown function DUF2525; KEGG: sdy:SDY_1052 hypothetical protein YP_005277503.1 PFAM: Dextransucrase DSRB; KEGG: sdy:SDY_1053 hypothetical protein YP_005277504.1 KEGG: sbo:SBO_1056 positive regulator for ctr capsule biosynthesis, positive transcription factor; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_005277505.1 KEGG: eoh:ECO103_2201 flagellar biosynthesis protein FliR; TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein YP_005277506.1 KEGG: sbo:SBO_1058 flagellar biosynthesis protein FliQ; TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3 YP_005277507.1 KEGG: sbc:SbBS512_E1069 flagellar biosynthesis protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein YP_005277508.1 TIGRFAM: flagellar biosynthetic protein FliO; KEGG: ssn:SSON_2005 flagellar biosynthesis protein FliO YP_005277509.1 KEGG: sbc:SbBS512_E1067 flagellar motor switch protein FliN; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein YP_005277510.1 KEGG: sbo:SBO_1062 flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein YP_005277511.1 PFAM: flagellar basal body-associated protein FliL; KEGG: eoi:ECO111_2526 flagellar basal body-associated protein FliL YP_005277512.1 PFAM: Flagellar hook-length control protein-like, C-terminal domain; KEGG: eoi:ECO111_2525 flagellar hook-length control protein YP_005277513.1 KEGG: ssn:SSON_2000 flagellar biosynthesis chaperone; TIGRFAM: flagellar export protein FliJ; PFAM: flagellar export FliJ family protein YP_005277514.1 TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; KEGG: ssn:SSON_1999 flagellum-specific ATP synthase; SMART: AAA ATPase YP_005277515.1 PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: eoj:ECO26_2827 flagellar assembly protein H YP_005277516.1 KEGG: ebd:ECBD_1706 flagellar motor switch protein G; TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG YP_005277517.1 KEGG: ebd:ECBD_1707 flagellar MS-ring protein; TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein YP_005277518.1 KEGG: ssn:SSON_1995 flagellar hook-basal body protein FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE YP_005277519.1 PFAM: small multidrug resistance protein; KEGG: ssn:SSON_1994 multidrug efflux protein YP_005277520.1 PFAM: PEBP family protein; KEGG: eoi:ECO111_2517 putative kinase inhibitor YP_005277521.1 SMART: Helix-turn-helix, AraC domain; KEGG: eoi:ECO111_2516 putative AraC-type regulatory protein YP_005277522.1 KEGG: eoi:ECO111_5009 putative IS609 transposase TnpA; manually curated; PFAM: transposase IS200-family protein YP_005277523.1 KEGG: eoj:ECO26_5373 putative IS609 transposase TnpB; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS891/IS1136/IS1341 family; Transposase, putative, helix-turn-helix domain; transposase IS605 OrfB YP_005277524.1 PFAM: protein of unknown function DUF159; KEGG: eoi:ECO111_2513 hypothetical protein YP_005277525.1 PFAM: SirA-like domain-containing protein; KEGG: cko:CKO_01008 hypothetical protein YP_005277526.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: sbo:SBO_1077 putative inner membrane protein YP_005277527.1 KEGG: sdy:SDY_1087 hypothetical protein YP_005277528.1 KEGG: eoi:ECO111_2509 cytoplasmic alpha-amylase; PFAM: alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain YP_005277529.1 PFAM: flagellar export chaperone; KEGG: eoi:ECO111_2508 flagellar biosynthesis protein FliT YP_005277530.1 KEGG: sbc:SbBS512_E1055 flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS YP_005277531.1 PFAM: flagellar hook-associated 2 domain-containing protein; flagellar hook-associated protein 2 domain-containing protein; flagellin hook IN repeat protein; KEGG: ebd:ECBD_1718 flagellar capping protein YP_005277532.1 PFAM: flagellin domain protein; KEGG: sbo:SBO_1083 flagellin YP_005277533.1 KEGG: ssn:SSON_1194 flagellar biosynthesis sigma factor; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein YP_005277534.1 PFAM: integrase domain protein SAM domain protein; KEGG: eoj:ECO26_2813 flagella biosynthesis protein FliZ YP_005277535.1 manually curated; PFAM: extracellular solute-binding protein family 3; KEGG: sbc:SbBS512_E1048 cystine transporter subunit; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor YP_005277536.1 KEGG: ebd:ECBD_1723 D-cysteine desulfhydrase; TIGRFAM: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_005277537.1 KEGG: ssn:SSON_1200 putative transport system permease protein (former YecC); TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_005277538.1 KEGG: ssn:SSON_1201 putative amino-acid ABC transporter ATP-binding protein YecC; PFAM: ABC transporter related; SMART: AAA ATPase YP_005277539.1 KEGG: eoh:ECO103_2172 DNA-binding transcriptional activator SdiA; PFAM: Autoinducer-binding domain protein; regulatory protein LuxR; SMART: regulatory protein LuxR YP_005277540.1 PFAM: Protein of unknown function DUF2594; KEGG: sdy:SDY_1103 hypothetical protein YP_005277541.1 KEGG: sbc:SbBS512_E1041 response regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_005277542.1 TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; UvrB/UvrC protein; helix-hairpin-helix motif; KEGG: ssn:SSON_1205 excinuclease ABC subunit C; SMART: Excinuclease ABC C subunit domain protein; Helix-hairpin-helix DNA-binding class 1 YP_005277543.1 TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; KEGG: sdy:SDY_1106 phosphatidylglycerophosphate synthetase; PFAM: CDP-alcohol phosphatidyltransferase YP_005277544.1 KEGG: sbo:SBO_1098 hypothetical protein; TIGRFAM: yecA family protein; PFAM: SEC-C motif domain protein YP_005277545.1 KEGG: ebr:ECB_01875 tyrosine transporter; TIGRFAM: aromatic amino acid transporter; PFAM: Tryptophan/tyrosine permease YP_005277546.1 KEGG: sbc:SbBS512_E1032 hypothetical protein; TIGRFAM: Protein of unknown function DUF2492; PFAM: Protein of unknown function DUF2492 YP_005277547.1 KEGG: sdy:SDY_1113 ferritin; PFAM: Ferritin Dps family protein YP_005277548.1 KEGG: ssn:SSON_1214 hypothetical protein YP_005277549.1 KEGG: sdy:SDY_1117 hypothetical protein YP_005277550.1 PFAM: Ferritin Dps family protein; KEGG: sdy:SDY_1116 ferritin-like protein YP_005277551.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ebd:ECBD_1740 periplasmic binding protein/LacI transcriptional regulator YP_005277552.1 KEGG: eoh:ECO103_2159 L-arabinose transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_005277553.1 PFAM: inner-membrane translocator; KEGG: sbc:SbBS512_E1023 L-arabinose transporter permease protein YP_005277554.1 TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; KEGG: ssn:SSON_1220 trehalose-6-phosphate phosphatase; PFAM: trehalose-phosphatase YP_005277555.1 TIGRFAM: alpha,alpha-trehalose-phosphate synthase [UDP-forming]; KEGG: sdy:SDY_1193 trehalose-6-phosphate synthase; PFAM: glycosyl transferase family 20 YP_005277556.1 PFAM: UspA domain-containing protein; KEGG: sbo:SBO_1113 universal stress protein UspC YP_005277557.1 PFAM: flagellar transcriptional activator; KEGG: sdy:SDY_1191 transcriptional activator FlhD YP_005277558.1 PFAM: flagellar transcriptional activator FlhC; KEGG: ssn:SSON_1226 transcriptional activator FlhC YP_005277559.1 KEGG: eoi:ECO111_2476 flagellar motor protein MotA YP_005277560.1 PFAM: OmpA/MotB domain protein; KEGG: ebd:ECBD_1749 flagellar motor protein MotB YP_005277561.1 KEGG: eoh:ECO103_2150 chemotaxis protein CheA; PFAM: CheY binding protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; ATP-binding region ATPase domain protein; CheW domain protein; SMART: CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein YP_005277562.1 KEGG: ssn:SSON_1230 purine-binding chemotaxis protein; PFAM: CheW domain protein; SMART: CheW domain protein YP_005277563.1 KEGG: ebd:ECBD_1752 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein YP_005277564.1 KEGG: sbc:SbBS512_E2178 methyl-accepting protein IV; PFAM: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein YP_005277565.1 PFAM: MCP methyltransferase CheR-type; KEGG: ebw:BWG_1698 chemotaxis methyltransferase CheR; SMART: MCP methyltransferase CheR-type YP_005277566.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: eoh:ECO103_2145 chemotaxis-specific methylesterase; SMART: response regulator receiver YP_005277567.1 KEGG: ssn:SSON_1235 chemotaxis regulatory protein CheY; PFAM: response regulator receiver; SMART: response regulator receiver YP_005277568.1 PFAM: Chemotaxis phosphatase CheZ; KEGG: sbo:SBO_1119 chemotaxis regulator CheZ YP_005277569.1 KEGG: eoh:ECO103_2142 flagellar biosynthesis protein FlhB; TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter YP_005277570.1 KEGG: eoi:ECO111_2465 flagellar biosynthesis protein FlhA; TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein YP_005277571.1 PFAM: flagellar FlhE family protein; KEGG: sbc:SbBS512_E2171 flagellar protein FlhE YP_005277572.1 KEGG: eoh:ECO103_2139 hypothetical protein YP_005277573.1 TIGRFAM: arginyl-tRNA synthetase; KEGG: sbc:SbBS512_E2169 arginyl-tRNA synthetase YP_005277574.1 PFAM: protein of unknown function DUF991; KEGG: ebd:ECBD_1763 hypothetical protein YP_005277575.1 PFAM: CutC family protein; KEGG: ssn:SSON_1244 copper homeostasis protein CutC YP_005277576.1 PFAM: NapC/NirT cytochrome c domain protein; KEGG: eoh:ECO103_2135 TMAO reductase III (TorYZ), cytochrome c-type subunit TorY YP_005277577.1 TIGRFAM: molybdopterin guanine dinucleotide-containing S/N-oxide reductase; KEGG: sbc:SbBS512_E2165 trimethylamine N-oxide reductase III, subunit TorZ; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region YP_005277578.1 KEGG: ssn:SSON_1249 putative enzyme; TIGRFAM: methyltransferase; PFAM: methyltransferase YP_005277579.1 KEGG: sdy:SDY_1169 hypothetical protein; TIGRFAM: methyltransferase; PFAM: Methyltransferase type 12 YP_005277580.1 KEGG: sdy:SDY_1168 hypothetical protein YP_005277581.1 PFAM: protein of unknown function DUF72; KEGG: ebd:ECBD_1770 hypothetical protein YP_005277582.1 PFAM: isochorismatase hydrolase; KEGG: ssn:SSON_1274 hypothetical protein YP_005277583.1 KEGG: sbc:SbBS512_E1106 aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; GAD domain protein YP_005277584.1 PFAM: NUDIX hydrolase; KEGG: ebd:ECBD_1773 dATP pyrophosphohydrolase YP_005277585.1 PFAM: protein of unknown function DUF28; KEGG: efe:EFER_1208 hypothetical protein YP_005277586.1 TIGRFAM: crossover junction endodeoxyribonuclease RuvC; KEGG: sdy:SDY_1150 Holliday junction resolvase; PFAM: Crossover junction endodeoxyribonuclease RuvC YP_005277587.1 KEGG: eoi:ECO111_2384 hypothetical protein YP_005277588.1 KEGG: eoi:ECO111_2383 Holliday junction DNA helicase RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein YP_005277589.1 TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; KEGG: sdy:SDY_1147 Holliday junction DNA helicase RuvB; SMART: AAA ATPase YP_005277590.1 KEGG: eoh:ECO103_4940 putative IS621 transposase; PFAM: transposase IS116/IS110/IS902 family protein; SMART: Helix-hairpin-helix DNA-binding class 1 YP_005277591.1 PFAM: ABC-3 protein; KEGG: eoh:ECO103_2049 high-affinity zinc transporter membrane component YP_005277592.1 KEGG: sbo:SBO_1175 high-affinity zinc transporter ATPase; PFAM: ABC transporter related; SMART: AAA ATPase YP_005277593.1 PFAM: periplasmic solute binding protein; KEGG: sfx:S1933 high-affinity zinc transporter periplasmic component YP_005277594.1 KEGG: sbc:SbBS512_E0952 hypothetical protein; PFAM: Peptidase M23; Opacity-associated protein A domain protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM YP_005277595.1 KEGG: ssn:SSON_1286 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; TIGRFAM: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; PFAM: lipid A biosynthesis acyltransferase YP_005277596.1 TIGRFAM: pyruvate kinase; KEGG: sbc:SbBS512_E2130 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta YP_005277597.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: sbo:SBO_1161 DNA-binding transcriptional regulator HexR YP_005277598.1 KEGG: ebd:ECBD_1786 hypothetical protein YP_005277599.1 TIGRFAM: glucose-6-phosphate 1-dehydrogenase; KEGG: sdy:SDY_1138 glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase YP_005277600.1 TIGRFAM: 6-phosphogluconate dehydratase; KEGG: ebd:ECBD_1788 phosphogluconate dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_005277601.1 TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; KEGG: sbc:SbBS512_E2125 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; PFAM: KDPG and KHG aldolase YP_005277602.1 TIGRFAM: phosphoribosylglycinamide formyltransferase 2; KEGG: ebd:ECBD_1790 phosphoribosylglycinamide formyltransferase 2; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp YP_005277603.1 PFAM: YebG family protein; KEGG: sdy:SDY_1134 DNA damage-inducible protein YebG YP_005277604.1 KEGG: sbc:SbBS512_E2122 hypothetical protein YP_005277605.1 KEGG: ebd:ECBD_1793 hypothetical protein YP_005277606.1 PFAM: protein of unknown function DUF533; KEGG: ssn:SSON_1302 hypothetical protein YP_005277607.1 KEGG: eoj:ECO26_2683 protease 2; PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller YP_005277608.1 KEGG: sdy:SDY_1130 exodeoxyribonuclease X; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease YP_005277609.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: sbc:SbBS512_E2118 hydrolase, carbon-nitrogen family YP_005277610.1 KEGG: sdy:SDY_1128 DNA polymerase III subunit theta; PFAM: DNA polymerase II beta subunit YP_005277611.1 PFAM: copper resistance protein CopC; KEGG: eoi:ECO111_2349 hypothetical protein YP_005277612.1 KEGG: eoh:ECO103_2031 putative inner membrane protein YP_005277613.1 PFAM: Protein of unknown function DUF2511; KEGG: sdy:SDY_1125 hypothetical protein YP_005277614.1 PFAM: metallophosphoesterase; KEGG: sbo:SBO_1253 serine/threonine protein phosphatase 1 YP_005277615.1 PFAM: protein of unknown function DUF1482; KEGG: ssn:SSON_1324 hypothetical protein YP_005277616.1 PFAM: protein of unknown function DUF1480; KEGG: sdy:SDY_1987 hypothetical protein YP_005277617.1 KEGG: eoj:ECO26_2605 rRNA (cytosine-C(5)-)-methyltransferase RsmF; TIGRFAM: RNA methylase, NOL1/NOP2/sun family; PFAM: Fmu (Sun) domain protein YP_005277618.1 PFAM: Mammalian cell entry related domain protein; KEGG: ebd:ECBD_1806 mammalian cell entry related domain protein YP_005277619.1 KEGG: eoh:ECO103_2024 hypothetical protein; TIGRFAM: integral membrane protein, PqiA family; PFAM: Paraquat-inducible protein A YP_005277620.1 KEGG: sbc:SbBS512_E2100 GAF domain protein; PFAM: GAF domain protein; SMART: GAF domain protein YP_005277621.1 PFAM: Fertility inhibition FinO-like; KEGG: sbo:SBO_1246 putative solute/DNA competence effector YP_005277622.1 SMART: peptidase S41; PDZ/DHR/GLGF domain protein; TIGRFAM: carboxyl-terminal protease; KEGG: sbc:SbBS512_E2098 carboxy-terminal protease; PFAM: peptidase S41; PDZ/DHR/GLGF domain protein YP_005277623.1 PFAM: peptidase M48 Ste24p; KEGG: sdy:SDY_1977 heat shock protein HtpX YP_005277624.1 PFAM: major facilitator superfamily MFS_1; KEGG: sbc:SbBS512_E2096 transporter, major facilitator family YP_005277625.1 KEGG: ssn:SSON_1334 putative regulator; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_005277626.1 KEGG: sdy:SDY_1974 hypothetical protein YP_005277627.1 manually curated; KEGG: cko:CKO_01150 hypothetical protein YP_005277628.1 KEGG: ebd:ECBD_1816 uncharacterized protein YebO YP_005277629.1 KEGG: sdy:SDY_1970 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2627 YP_005277630.1 KEGG: cro:ROD_18621 cold shock-like protein CspC; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_005277631.1 KEGG: eoh:ECO103_2012 23S rRNA methyltransferase A; PFAM: Methyltransferase type 11 YP_005277632.1 KEGG: sdy:SDY_1967 hypothetical protein; manually curated; PFAM: protein of unknown function DUF204 YP_005277633.1 PFAM: protein of unknown function DUF986; KEGG: sdy:SDY_1966 hypothetical protein YP_005277634.1 KEGG: sbo:SBO_1231 mannose-specific PTS system protein IID; TIGRFAM: PTS system, mannose/fructose/sorbose family, IID subunit; PFAM: PTS system mannose/fructose/sorbose family IID component YP_005277635.1 KEGG: sbc:SbBS512_E2084 PTS system, mannose-specific IIC component; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIC subunit; PFAM: phosphotransferase system PTS sorbose-specific IIC subunit YP_005277636.1 TIGRFAM: PTS system, mannose/fructose/sorbose family, IIA subunit; PTS system, mannose/fructose/sorbose family, IIB subunit; KEGG: sbc:SbBS512_E2083 PTS system, mannose-specific IIAB component; PFAM: PTS system sorbose subfamily IIB component; PTS system fructose subfamily IIA component YP_005277637.1 KEGG: ebd:ECBD_1825 putative cytoplasmic protein YP_005277638.1 PFAM: Integral membrane protein TerC; CBS domain containing protein; transporter-associated region; KEGG: ebd:ECBD_1826 integral membrane protein TerC YP_005277639.1 KEGG: ebd:ECBD_1827 diguanylate phosphodiesterase; PFAM: EAL domain protein; SMART: EAL domain protein YP_005277640.1 TIGRFAM: L-serine dehydratase 1; KEGG: sbo:SBO_1270 L-serine deaminase; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain YP_005277641.1 PFAM: NUDIX hydrolase; KEGG: sdy:SDY_1719 hypothetical protein YP_005277642.1 KEGG: ebd:ECBD_1830 para-aminobenzoate synthase, subunit I; TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein YP_005277643.1 PFAM: protein of unknown function UPF0181; KEGG: sdy:SDY_1717 hypothetical protein YP_005277644.1 KEGG: sbo:SBO_1276 hypothetical protein; manually curated; PFAM: Domain of unknown function DUF1889 YP_005277645.1 PFAM: Endoribonuclease L-PSP; KEGG: sdy:SDY_1713 hypothetical protein YP_005277646.1 KEGG: sbo:SBO_1280 putative enzyme; PFAM: type III restriction protein res subunit; SMART: helicase c2; DEAD-like helicase YP_005277647.1 PFAM: peptidase M22 glycoprotease; KEGG: ebw:BWG_1620 putative peptidase YP_005277648.1 KEGG: sfv:SFV_1423 putative outer membrane protein; TIGRFAM: outer membrane lipoprotein, Slp family; PFAM: outer membrane lipoprotein Slp YP_005277649.1 PFAM: AMP-dependent synthetase and ligase; KEGG: ebd:ECBD_1837 long-chain-fatty-acid--CoA ligase YP_005277650.1 SMART: 3'-5' exonuclease; HRDC domain protein; TIGRFAM: ribonuclease D; KEGG: eok:G2583_2251 ribonuclease D; PFAM: 3'-5' exonuclease; HRDC domain protein YP_005277651.1 PFAM: ferredoxin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: eoh:ECO103_1992 putative oxidoreductase YP_005277652.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: ssn:SSON_1359 hypothetical protein YP_005277653.1 KEGG: eok:G2583_2248 transporter, betaine/carnitine/choline transporter (BCCT) family; TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter YP_005277654.1 TIGRFAM: tartrate dehydrogenase; KEGG: ebw:BWG_1613 putative dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_005277655.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sbo:SBO_1289 putative transcriptional regulator LysR-type YP_005277656.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: ebd:ECBD_1844 leucine export protein LeuE YP_005277657.1 PFAM: protein of unknown function DUF1971; KEGG: sdy:SDY_1697 hypothetical protein YP_005277658.1 PFAM: Domain of unknown function DUF1869; KEGG: eoh:ECO103_1985 hypothetical protein YP_005277659.1 PFAM: transposase IS200-family protein; KEGG: eoh:ECO103_1984 putative IS609 transposase TnpA YP_005277660.1 manually curated; TIGRFAM: transposase, IS605 OrfB family; KEGG: eok:G2583_2932 IS605 family transposase orfB; PFAM: transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB YP_005277661.1 PFAM: Transglycosylase-associated protein; KEGG: sdy:SDY_1695 hypothetical protein YP_005277662.1 KEGG: eok:G2583_2241 GAF domain/diguanylate cyclase (GGDEF) domain protein; PFAM: GGDEF domain containing protein; GAF domain protein; manually curated; TIGRFAM: diguanylate cyclase; SMART: GGDEF domain containing protein; GAF domain protein YP_005277663.1 PFAM: protein of unknown function DUF333; KEGG: eoi:ECO111_2296 hypothetical protein YP_005277664.1 PFAM: protein of unknown function DUF488; KEGG: ssn:SSON_1369 hypothetical protein YP_005277665.1 KEGG: eoh:ECO103_1977 putative transporter; TIGRFAM: cyanate transporter; PFAM: major facilitator superfamily MFS_1 YP_005277666.1 KEGG: sbo:SBO_1303 putative AraC-type regulatory protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_005277667.1 PFAM: protein of unknown function DUF441; KEGG: sbo:SBO_1304 hypothetical protein YP_005277668.1 manually curated; KEGG: sdy:SDY_1686 hypothetical protein YP_005277669.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: ssn:SSON_1374 hypothetical protein YP_005277670.1 SMART: GGDEF domain containing protein; manually curated; TIGRFAM: diguanylate cyclase; KEGG: eoj:ECO26_2553 putative diguanylate cyclase; PFAM: GGDEF domain containing protein YP_005277671.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: eoi:ECO111_2288 hypothetical protein; SMART: GGDEF domain containing protein YP_005277672.1 PFAM: protein of unknown function DUF444; KEGG: sbo:SBO_1309 hypothetical protein YP_005277673.1 KEGG: sbo:SBO_1310 hypothetical protein; PFAM: PrkA AAA domain protein; PrkA serine kinase; SMART: PrkA AAA domain protein YP_005277674.1 PFAM: MltA-interacting MipA family protein; KEGG: sdy:SDY_1485 hypothetical protein YP_005277675.1 PFAM: aldo/keto reductase; KEGG: eoi:ECO111_2284 putative oxidoreductase YP_005277676.1 PFAM: Aldose 1-epimerase; KEGG: eoh:ECO103_1966 hypothetical protein YP_005277677.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: sdy:SDY_1488 glyceraldehyde-3-phosphate dehydrogenase A; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YP_005277678.1 TIGRFAM: methionine-R-sulfoxide reductase; KEGG: ssn:SSON_1385 methionine sulfoxide reductase B; PFAM: Methionine sulfoxide reductase B YP_005277679.1 PFAM: protein of unknown function DUF1315; KEGG: sbc:SbBS512_E2024 hypothetical protein YP_005277680.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: eok:G2583_2223 oxidoreductase, zinc-binding dehydrogenase family YP_005277681.1 PFAM: major facilitator superfamily MFS_1; KEGG: ebw:BWG_1588 putative transporter YP_005277682.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ebd:ECBD_1870 alcohol dehydrogenase zinc-binding domain protein YP_005277683.1 TIGRFAM: ketose-bisphosphate aldolase; KEGG: ebw:BWG_1586 putative aldolase; PFAM: ketose-bisphosphate aldolase class-II YP_005277684.1 PFAM: PfkB domain protein; KEGG: ebw:BWG_1585 putative kinase YP_005277685.1 PFAM: aldo/keto reductase; KEGG: ebw:BWG_1584 putative oxidoreductase YP_005277686.1 KEGG: ebw:BWG_1583 putative DNA-binding transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_005277687.1 KEGG: eok:G2583_2216 inner membrane metabolite transport protein YdjE YP_005277688.1 KEGG: sbc:SbBS512_E2023 nicotinamidase/pyrazinamidase; PFAM: isochorismatase hydrolase YP_005277689.1 KEGG: ssn:SSON_1388 cytoplasmic asparaginase I; TIGRFAM: L-asparaginase, type I; PFAM: Asparaginase/glutaminase YP_005277690.1 manually curated; TIGRFAM: signal peptide peptidase SppA, 67K type; signal peptide peptidase SppA, 36K type; KEGG: sbc:SbBS512_E2021 protease 4; PFAM: peptidase S49 YP_005277691.1 PFAM: nitroreductase; KEGG: sbo:SBO_1322 hypothetical protein YP_005277692.1 KEGG: sdy:SDY_1509 selenophosphate synthetase; TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_005277693.1 TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; KEGG: eoh:ECO103_1957 DNA topoisomerase III; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein YP_005277694.1 KEGG: eoi:ECO111_2273 hypothetical protein YP_005277695.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: eoh:ECO103_1954 glutamate dehydrogenase YP_005277696.1 PFAM: protein of unknown function DUF1496; KEGG: sbc:SbBS512_E2012 hypothetical protein YP_005277697.1 PFAM: NUDIX hydrolase; KEGG: eoh:ECO103_1952 pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase YP_005277698.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: ebd:ECBD_1886 CDP-alcohol phosphatidyltransferase YP_005277699.1 KEGG: eoh:ECO103_1950 putative thiosulfate sulfur transferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_005277700.1 KEGG: eoh:ECO103_1949 putative transporter subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_005277701.1 KEGG: eoh:ECO103_1948 fused transporter subunits of ABC superfamily: membrane components YP_005277702.1 PFAM: extracellular solute-binding protein family 1; KEGG: eoh:ECO103_1947 putative ABC transporter solute-binding protein YP_005277703.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: eoh:ECO103_1946 hypothetical protein YP_005277704.1 PFAM: SNARE associated Golgi protein; KEGG: eoh:ECO103_1945 hypothetical protein YP_005277705.1 KEGG: ssn:SSON_1406 hypothetical protein YP_005277706.1 PFAM: SNARE associated Golgi protein; KEGG: ebd:ECBD_1894 SNARE associated Golgi protein YP_005277707.1 KEGG: sbc:SbBS512_E1997 exonuclease III; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase YP_005277708.1 TIGRFAM: acetylornithine and succinylornithine aminotransferase; succinylornithine transaminase family; KEGG: eoh:ECO103_1941 bifunctional succinylornithine transaminase/acetylornithine transaminase; PFAM: aminotransferase class-III YP_005277709.1 TIGRFAM: arginine N-succinyltransferase; arginine/ornithine succinyltransferase subunit; KEGG: eoh:ECO103_1940 arginine succinyltransferase; PFAM: arginine N-succinyltransferase beta subunit YP_005277710.1 KEGG: eoi:ECO111_2257 succinylglutamic semialdehyde dehydrogenase; TIGRFAM: succinylglutamic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_005277711.1 TIGRFAM: succinylarginine dihydrolase; KEGG: eoj:ECO26_2520 succinylarginine dihydrolase; PFAM: Succinylarginine dihydrolase YP_005277712.1 TIGRFAM: succinylglutamate desuccinylase; KEGG: sbc:SbBS512_E1990 succinylglutamate desuccinylase; PFAM: Succinylglutamate desuccinylase/aspartoacylase YP_005277713.1 PFAM: protein of unknown function Spy-related; KEGG: eok:G2583_2189 Spy YP_005277714.1 PFAM: protein of unknown function DUF886; KEGG: sfv:SFV_1478 hypothetical protein YP_005277715.1 KEGG: eoi:ECO111_2252 nucleotide excision repair endonuclease; PFAM: Excinuclease ABC C subunit domain protein; SMART: Excinuclease ABC C subunit domain protein YP_005277716.1 TIGRFAM: NAD+ synthetase; KEGG: ssn:SSON_1418 NAD synthetase YP_005277717.1 PFAM: SmpA/OmlA domain-containing protein; KEGG: sdy:SDY_1541 DNA-binding transcriptional activator OsmE YP_005277718.1 TIGRFAM: PTS system, lactose/cellobiose family IIB subunit; KEGG: sbo:SBO_1352 N,N'-diacetylchitobiose-specific PTS system transporter subunit IIB; PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit YP_005277719.1 TIGRFAM: PTS system, cellobiose-specific IIC subunit; PTS system, lactose/cellobiose family IIC subunit; KEGG: ebd:ECBD_1908 PTS system N,N'-diacetylchitobiose-specific transporter subunit IIC; PFAM: phosphotransferase system EIIC YP_005277720.1 KEGG: ssn:SSON_1422 PTS system N,N'-diacetylchitobiose-specific transporter subunit IIA; TIGRFAM: PTS system, lactose-specific IIa component; PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit YP_005277721.1 KEGG: ssn:SSON_1423 DNA-binding transcriptional regulator ChbR; PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; SMART: Helix-turn-helix, AraC domain YP_005277722.1 PFAM: glycoside hydrolase family 4; KEGG: eoh:ECO103_1927 cryptic phospho-beta-glucosidase, NAD(P)-binding YP_005277723.1 PFAM: YdjC family protein; KEGG: eoh:ECO103_1926 hypothetical protein YP_005277724.1 KEGG: eoi:ECO111_2243 hydroperoxidase II; PFAM: Catalase related subgroup; Catalase domain protein YP_005277725.1 PFAM: Cell division activator CedA; KEGG: ssn:SSON_1427 cell division modulator YP_005277726.1 KEGG: sfl:SF1498 hypothetical protein YP_005277727.1 KEGG: ebw:BWG_1543 hypothetical protein YP_005277728.1 PFAM: sodium:dicarboxylate symporter; KEGG: eoi:ECO111_2239 putative transporter YP_005277729.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: ssn:SSON_1429 hypothetical protein YP_005277730.1 KEGG: sbc:SbBS512_E1972 2-deoxyglucose-6-phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_005277731.1 KEGG: sdy:SDY_1819 hypothetical protein YP_005277732.1 PFAM: Fructosamine/Ketosamine-3-kinase; KEGG: sdy:SDY_1818 hypothetical protein YP_005277733.1 KEGG: sdy:SDY_1817 hypothetical protein YP_005277734.1 KEGG: sfv:SFV_1498 6-phosphofructokinase 2; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein YP_005277735.1 PFAM: protein of unknown function DUF481; KEGG: sbc:SbBS512_E1967 hypothetical protein YP_005277736.1 manually curated; KEGG: sfv:SFV_1500 hypothetical protein YP_005277737.1 KEGG: ssn:SSON_1439 threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Threonyl/alanyl tRNA synthetase SAD; TGS domain-containing protein; Anticodon-binding domain protein YP_005277738.1 manually curated; TIGRFAM: translation initiation factor IF-3; KEGG: ebd:ECBD_1927 translation initiation factor IF-3; PFAM: Translation initiation factor 3-like YP_005277739.1 KEGG: cro:ROD_13391 50S ribosomal subunit protein L35; TIGRFAM: ribosomal protein L35; PFAM: Ribosomal protein L35 YP_005277740.1 KEGG: cro:ROD_13401 50S ribosomal subunit protein L20; TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20 YP_005277741.1 KEGG: sfv:SFV_1509 phenylalanyl-tRNA synthetase subunit alpha; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein YP_005277742.1 TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: ssn:SSON_1445 phenylalanyl-tRNA synthetase subunit beta YP_005277743.1 TIGRFAM: integration host factor, alpha subunit; PFAM: histone family protein DNA-binding protein; KEGG: cro:ROD_13431 integration host factor alpha subunit; SMART: histone family protein DNA-binding protein YP_005277744.1 PFAM: transport system permease protein; KEGG: eoh:ECO103_1855 vtamin B12-transporter permease YP_005277745.1 KEGG: sdy:SDY_1805 putative glutathione peroxidase; PFAM: glutathione peroxidase YP_005277746.1 KEGG: sdy:SDY_1804 vitamin B12-transporter ATPase; PFAM: ABC transporter related; SMART: AAA ATPase YP_005277747.1 PFAM: NLP/P60 protein; KEGG: ssn:SSON_1450 lipoprotein YP_005277748.1 PFAM: EAL domain protein; KEGG: eoh:ECO103_1851 hypothetical protein YP_005277749.1 PFAM: protein of unknown function UPF0061; KEGG: eoh:ECO103_1850 hypothetical protein YP_005277750.1 PFAM: Hemin uptake protein hemP; KEGG: sdy:SDY_1799 hypothetical protein YP_005277751.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: sbo:SBO_1424 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA YP_005277752.1 PFAM: protein of unknown function DUF299; KEGG: sdy:SDY_1797 hypothetical protein YP_005277753.1 TIGRFAM: phosphoenolpyruvate synthase; KEGG: eoi:ECO111_2172 phosphoenolpyruvate synthase; PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; PEP-utilizing protein YP_005277754.1 PFAM: AMP-dependent synthetase and ligase; KEGG: eok:G2583_2098 putative ligase/synthetase YP_005277755.1 KEGG: sbc:SbBS512_E1903 iron-sulfur cluster-binding protein YP_005277756.1 KEGG: eoh:ECO103_1843 hypothetical protein; PFAM: FAD dependent oxidoreductase YP_005277757.1 PFAM: Electron transfer flavoprotein alpha subunit ; Electron transfer flavoprotein alpha/beta-subunit; KEGG: ebw:BWG_1512 electron transfer flavoprotein subunit YdiR YP_005277758.1 KEGG: eoj:ECO26_2426 putative electron transfer flavoprotein YdiQ; manually curated; PFAM: Electron transfer flavoprotein alpha/beta-subunit YP_005277759.1 KEGG: sbc:SbBS512_E1899 transcriptional regulator, AraC family; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_005277760.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: eok:G2583_2092 acyl-coA dehydrogenase YP_005277761.1 PFAM: coenzyme A transferase; KEGG: eoh:ECO103_1837 fused putative acetyl-CoA: acetoacetyl-CoA transferase: alpha subunit/beta subunit YP_005277762.1 TIGRFAM: 3-dehydroquinate dehydratase, type I; KEGG: eoh:ECO103_1836 3-dehydroquinate dehydratase; PFAM: dehydroquinase class I YP_005277763.1 PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; KEGG: eoh:ECO103_1835 quinate/shikimate dehydrogenase YP_005277764.1 PFAM: major facilitator superfamily MFS_1; KEGG: eok:G2583_2088 transporter, major facilitator family YP_005277765.1 PFAM: major facilitator superfamily MFS_1; KEGG: eoj:ECO26_2418 putative transporter YP_005277766.1 PFAM: Domain of unknown function DUF1870; KEGG: ebw:BWG_1503 hypothetical protein YP_005277767.1 PFAM: protein of unknown function UPF0118; KEGG: sdy:SDY_1676 putative inner membrane protein YP_005277768.1 PFAM: FAD linked oxidase domain protein; KEGG: eoh:ECO103_1830 putative FAD-linked oxidoreductase YP_005277769.1 PFAM: thioesterase superfamily protein; KEGG: ebd:ECBD_1960 hypothetical protein YP_005277770.1 manually curated; KEGG: sfv:SFV_1708 hypothetical protein YP_005277771.1 KEGG: sbo:SBO_1446 iron-sulfur cluster assembly scaffold protein; TIGRFAM: FeS assembly scaffold SufA; iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein YP_005277772.1 KEGG: eoi:ECO111_2152 cysteine desulfurase activator complex subunit SufB; TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein YP_005277773.1 TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; KEGG: ssn:SSON_1474 cysteine desulfurase ATPase component; SMART: AAA ATPase YP_005277774.1 KEGG: eoi:ECO111_2150 cysteine desulfurase activator complex subunit SufD; TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein YP_005277775.1 KEGG: eoi:ECO111_2149 bifunctional cysteine desulfurase/selenocysteine lyase; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V YP_005277776.1 PFAM: Fe-S metabolism associated SufE; KEGG: ebd:ECBD_1966 cysteine desufuration protein SufE YP_005277777.1 KEGG: sfv:SFV_1701 hypothetical protein; PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM YP_005277778.1 PFAM: LPP repeat-containing protein; KEGG: sdy:SDY_1908 murein lipoprotein YP_005277779.1 TIGRFAM: pyruvate kinase; KEGG: sbc:SbBS512_E1877 pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta YP_005277780.1 KEGG: sdy:SDY_1904 hypothetical protein YP_005277781.1 KEGG: sbo:SBO_1458 hypothetical protein YP_005277782.1 PFAM: Aldehyde ferredoxin oxidoreductase ; aldehyde ferredoxin oxidoreductase; KEGG: ebd:ECBD_1972 putative oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase YP_005277783.1 KEGG: eoh:ECO103_1812 hypothetical protein YP_005277784.1 KEGG: sdy:SDY_1899 putative oxidoreductase, Fe-S subunit YP_005277785.1 KEGG: eoi:ECO111_2139 putative cytochrome YP_005277786.1 KEGG: eoh:ECO103_1809 hypothetical protein YP_005277787.1 KEGG: eoh:ECO103_1808 hypothetical protein YP_005277788.1 PFAM: Putative mono-oxygenase ydhR; KEGG: sbc:SbBS512_E1865 hypothetical protein YP_005277789.1 KEGG: sbc:SbBS512_E1862 hypothetical protein YP_005277790.1 KEGG: sbc:SbBS512_E1861 multidrug efflux protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_005277791.1 TIGRFAM: riboflavin synthase, alpha subunit; KEGG: sdy:SDY_1888 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein YP_005277792.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; KEGG: ssn:SSON_1495 cyclopropane fatty acyl phospholipid synthase YP_005277793.1 KEGG: ebd:ECBD_1983 inner membrane transport protein YdhC; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1 YP_005277794.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sdy:SDY_1885 putative DNA-binding transcriptional regulator YP_005277795.1 KEGG: sbc:SbBS512_E1857 DNA-binding transcriptional repressor PurR; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_005277796.1 manually curated; KEGG: cko:CKO_01671 hypothetical protein YP_005277797.1 PFAM: major facilitator superfamily MFS_1; KEGG: sdy:SDY_1883 putative transport protein YP_005277798.1 KEGG: sdy:SDY_1882 superoxide dismutase; PFAM: Manganese/iron superoxide dismutase-like YP_005277799.1 PFAM: NLP/P60 protein; KEGG: sbc:SbBS512_E1852 NlpC/P60 family protein YP_005277800.1 KEGG: sdy:SDY_1880 hypothetical protein; TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin YP_005277801.1 KEGG: eoi:ECO111_2123 putative ATP-dependent helicase Lhr; PFAM: DEAD/H associated domain protein; DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; AAA ATPase; helicase domain protein YP_005277802.1 TIGRFAM: ribonuclease T; PFAM: Exonuclease RNase T and DNA polymerase III; KEGG: sdy:SDY_1878 ribonuclease T; SMART: Exonuclease YP_005277803.1 TIGRFAM: lactoylglutathione lyase; KEGG: sdy:SDY_1877 glyoxalase I; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_005277804.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: eoh:ECO103_1791 N-ethylmaleimide reductase YP_005277805.1 PFAM: regulatory protein TetR; KEGG: sbc:SbBS512_E1841 transcriptional regulator, TetR family YP_005277806.1 PFAM: aldo/keto reductase; KEGG: eoi:ECO111_2117 putative oxidoreductase YP_005277807.1 KEGG: sfx:S1805 superoxide dismutase; manually curated; PFAM: superoxide dismutase copper/zinc binding YP_005277808.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: eoi:ECO111_2115 hypothetical protein YP_005277809.1 KEGG: ebd:ECBD_1999 secretion protein HlyD family protein; manually curated; PFAM: secretion protein HlyD family protein YP_005277810.1 PFAM: protein of unknown function DUF1656; KEGG: ssn:SSON_1513 hypothetical protein YP_005277811.1 KEGG: sfv:SFV_1661 transcriptional regulator SlyA; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_005277812.1 KEGG: sdy:SDY_1864 putative outer membrane protein YP_005277813.1 PFAM: protein of unknown function UPF0075; KEGG: eoi:ECO111_2110 anhydro-N-acetylmuramic acid kinase YP_005277814.1 PFAM: Protein of unknown function DUF2091, periplasmic; KEGG: sbc:SbBS512_E1831 lysozyme inhibitor YP_005277815.1 TIGRFAM: pyridoxamine 5'-phosphate oxidase; KEGG: sbc:SbBS512_E1830 pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; Pyridoxine 5'-phosphate oxidase, dimerisation-like YP_005277816.1 SMART: RNA-binding S4 domain protein; TIGRFAM: tyrosyl-tRNA synthetase; KEGG: sbc:SbBS512_E1829 tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein YP_005277817.1 TIGRFAM: pyridoxal kinase; KEGG: sbo:SBO_1498 pyridoxamine kinase; PFAM: Phosphomethylpyrimidine kinase type-1 YP_005277818.1 PFAM: Glutathione S-transferase domain; KEGG: sdy:SDY_1858 glutathionine S-transferase YP_005277819.1 KEGG: sbc:SbBS512_E1824 putative tripeptide transporter permease; TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region YP_005277820.1 KEGG: ebd:ECBD_2010 hypothetical protein YP_005277821.1 SMART: HhH-GPD family protein; iron-sulfur cluster loop; TIGRFAM: endonuclease III; KEGG: sbc:SbBS512_E1822 endonuclease III; PFAM: HhH-GPD family protein; iron-sulfur cluster loop YP_005277822.1 KEGG: sdy:SDY_1855 electron transport complex RsxE subunit; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; PFAM: RnfA-Nqr electron transport subunit YP_005277823.1 TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain protein; KEGG: sbc:SbBS512_E1820 electron transport complex protein RnfG; SMART: FMN-binding domain protein YP_005277824.1 KEGG: sfv:SFV_1647 electron transport complex protein RnfD; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein YP_005277825.1 KEGG: eoh:ECO103_1770 electron transport complex protein RnfC; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain YP_005277826.1 KEGG: ssn:SSON_1530 electron transport complex protein RnfB; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: Fe-S cluster domain protein YP_005277827.1 KEGG: sdy:SDY_1850 Na(+)-translocating NADH-quinone reductase subunit E; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit YP_005277828.1 PFAM: Protein of unknown function DUF2569; KEGG: ssn:SSON_1532 hypothetical protein YP_005277829.1 PFAM: Haemolysin expression modulating family protein; KEGG: sdy:SDY_1848 OriC-binding nucleoid-associated protein YP_005277830.1 manually curated; KEGG: ebd:ECBD_2020 hypothetical protein YP_005277831.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sbo:SBO_1510 putative oxidoreductase YP_005277832.1 TIGRFAM: adenosine deaminase; KEGG: ebd:ECBD_2022 adenosine deaminase; PFAM: adenosine/AMP deaminase YP_005277833.1 PFAM: aminotransferase class I and II; KEGG: eoh:ECO103_1762 bifunctional beta-cystathionase, PLP-dependent and regulator of maltose regulon YP_005277834.1 TIGRFAM: PTS system, maltose and glucose-specific IIBC subunit; PTS system, maltose and glucose-specific subfamily, IIC subunit; PTS system, glucose-like IIB subunint; KEGG: ssn:SSON_1537 bifunctional PTS system maltose and glucose-specific transporter subunits IICB; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site YP_005277835.1 KEGG: sbc:SbBS512_E1808 DNA-binding transcriptional repressor MalI; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_005277836.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: eoh:ECO103_1759 7-alpha-hydroxysteroid dehydrogenase YP_005277837.1 PFAM: regulatory protein TetR; KEGG: sbc:SbBS512_E1805 transcriptional regulator UidR YP_005277838.1 KEGG: eoh:ECO103_1757 beta-D-glucuronidase; PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich YP_005277839.1 KEGG: eoj:ECO26_2344 glucuronide transporter; TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; PFAM: major facilitator superfamily MFS_1 YP_005277840.1 PFAM: outer membrane porin; KEGG: ebd:ECBD_2030 putative outer membrane porin protein YP_005277841.1 KEGG: ebd:ECBD_2031 hypothetical protein YP_005277842.1 PFAM: protein of unknown function DUF945; KEGG: ebd:ECBD_2032 protein of unknown function DUF945 YP_005277843.1 TIGRFAM: mannose-6-phosphate isomerase, class I; KEGG: sdy:SDY_1829 mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type I YP_005277844.1 KEGG: sbc:SbBS512_E1798 fumarate hydratase; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region YP_005277845.1 KEGG: sbc:SbBS512_E1796 fumarate hydratase; TIGRFAM: fumarate hydratase, class II; PFAM: fumarate lyase; Fumarase C-like YP_005277846.1 KEGG: sfv:SFV_1626 DNA replication terminus site-binding protein; TIGRFAM: DNA replication terminus site-binding protein; PFAM: site-binding protein DNA replication region YP_005277847.1 KEGG: eoi:ECO111_2078 sensor protein RstB; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_005277848.1 manually curated; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; KEGG: sfv:SFV_1623 DNA-binding transcriptional regulator RstA; SMART: response regulator receiver YP_005277849.1 PFAM: GlpM family protein; KEGG: sdy:SDY_1546 hypothetical protein YP_005277850.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: eoh:ECO103_1746 short chain dehydrogenase YP_005277851.1 KEGG: sfv:SFV_1620 putative arginine/ornithine antiporter; TIGRFAM: arginine/ornithine antiporter; PFAM: amino acid permease-associated region YP_005277852.1 PFAM: protein of unknown function DUF1471; KEGG: sdy:SDY_1549 hypothetical protein YP_005277853.1 manually curated; TIGRFAM: NAD(P) transhydrogenase, alpha subunit; KEGG: eok:G2583_1997 NAD(P) transhydrogenase, alpha subunit; PFAM: alanine dehydrogenase/PNT domain protein YP_005277854.1 KEGG: sdy:SDY_1551 pyridine nucleotide transhydrogenase; PFAM: NAD(P) transhydrogenase beta subunit YP_005277855.1 PFAM: protein of unknown function UPF0118; KEGG: sbc:SbBS512_E1787 putative transport protein YP_005277856.1 manually curated; KEGG: sec:SC1499 hypothetical protein YP_005277857.1 PFAM: small multidrug resistance protein; KEGG: sdy:SDY_1553 multidrug efflux system protein MdtJ YP_005277858.1 PFAM: small multidrug resistance protein; KEGG: sbc:SbBS512_E1785 multidrug efflux system protein MdtI YP_005277859.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: sfv:SFV_1613 hypothetical protein YP_005277860.1 PFAM: Acid shock repeat protein; KEGG: sdy:SDY_1556 acid shock protein precursor YP_005277861.1 PFAM: major facilitator superfamily MFS_1; KEGG: ssn:SSON_1568 putative transport protein YP_005277862.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eok:G2583_1989 putative transcriptional regulator LysR-type YP_005277863.1 PFAM: ROK family protein; KEGG: eok:G2583_1988 putative NAGC-like transcriptional regulator YP_005277864.1 TIGRFAM: dethiobiotin synthase; KEGG: ebd:ECBD_2053 putative dithiobiotin synthetase YP_005277865.1 KEGG: sfv:SFV_1607 putative voltage-gated ClC-type chloride channel ClcB; manually curated; PFAM: Cl- channel voltage-gated family protein YP_005277866.1 KEGG: ssn:SSON_1573 twin-argninine leader-binding protein DmsD YP_005277867.1 PFAM: DMSO reductase anchor subunit (DmsC); KEGG: ebd:ECBD_2056 DMSO reductase anchor subunit (DmsC) YP_005277868.1 TIGRFAM: dimethylsulfoxide reductase, chain B; KEGG: sdy:SDY_1567 putative oxidoreductase, Fe-S subunit YP_005277869.1 KEGG: ebd:ECBD_2058 anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region YP_005277870.1 KEGG: eoh:ECO103_1726 oxidoreductase subunit; TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region YP_005277871.1 PFAM: protein of unknown function DUF1161; KEGG: eoh:ECO103_1725 hypothetical protein YP_005277872.1 PFAM: protein of unknown function UPF0257; KEGG: sbc:SbBS512_E1771 hypothetical protein YP_005277873.1 KEGG: ebd:ECBD_2062 diamine N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_005277874.1 PFAM: protein of unknown function DUF1283; KEGG: sfv:SFV_1561 hypothetical protein YP_005277875.1 PFAM: protein of unknown function UPF0060; KEGG: ebd:ECBD_2064 hypothetical protein YP_005277876.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ebd:ECBD_2065 mandelate racemase/muconate lactonizing protein YP_005277877.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: eoi:ECO111_2047 putative dehydrogenase YP_005277878.1 KEGG: eok:G2583_1973 inner membrane metabolite transport protein YdfJ YP_005277879.1 PFAM: integrase family protein; KEGG: eoi:ECO111_2046 putative integrase YP_005277880.1 PFAM: protein of unknown function DUF1233 excisionase; KEGG: ebr:ECB_01546 excisionase YP_005277881.1 PFAM: Exonuclease RNase T and DNA polymerase III; KEGG: eoj:ECO26_2208 putative exonuclease YP_005277882.1 PFAM: protein of unknown function DUF1482; KEGG: ebw:BWG_1393 Qin prophage; hypothetical protein YP_005277883.1 PFAM: DicB family protein; KEGG: eoi:ECO111_2042 putative cell division inhibition protein DicB YP_005277884.1 manually curated; KEGG: etw:ECSP_1720 hypothetical protein YP_005277885.1 KEGG: eoi:ECO111_1407 hypothetical protein YP_005277886.1 KEGG: ebw:BWG_1391 Qin prophage; hypothetical protein YP_005277887.1 PFAM: protein of unknown function DUF1391; KEGG: eoh:ECO103_2282 hypothetical protein YP_005277888.1 KEGG: ebw:BWG_1389 transcriptional repressor DicA; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_005277889.1 KEGG: ebw:BWG_1388 DNA-binding transcriptional regulator DicC YP_005277890.1 PFAM: protein of unknown function DUF1019; KEGG: eoj:ECO26_2201 putative phage regulatory protein CII YP_005277891.1 KEGG: eok:G2583_2473 phage O protein family YP_005277892.1 PFAM: protein of unknown function DUF977; KEGG: ebr:ECB_01535 hypothetical protein YP_005277893.1 KEGG: sbo:SBO_0964 hypothetical protein YP_005277894.1 KEGG: sty:STY2055 hypothetical protein YP_005277895.1 PFAM: Integrase catalytic region; KEGG: enc:ECL_A109 putative transposase YP_005277896.1 KEGG: ebw:BWG_1385 Qin prophage; hypothetical protein YP_005277897.1 manually curated; KEGG: ebw:BWG_1384 Qin prophage; hypothetical protein YP_005277898.1 KEGG: ent:Ent638_4262 bifunctional antitoxin/transcriptional repressor RelB; TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin YP_005277899.1 KEGG: sfx:S1669 hypothetical protein; TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system YP_005277900.1 KEGG: eoj:ECO26_2192 hypothetical protein YP_005277901.1 SMART: HNH nuclease; KEGG: eoj:ECO26_2191 hypothetical protein YP_005277902.1 PFAM: antitermination protein; KEGG: ebw:BWG_1378 Qin prophage; putative antitermination protein Q YP_005277903.1 KEGG: efe:EFER_4435 cold shock protein; Qin prophage; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_005277904.1 KEGG: ebw:BWG_1376 Qin prophage; cold shock protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_005277906.1 PFAM: Lysis S family protein; KEGG: eoj:ECO26_2187 putative holin protein YP_005277907.1 PFAM: protein of unknown function DUF1327; KEGG: ebw:BWG_1374 Qin prophage; hypothetical protein YP_005277908.1 KEGG: eoj:ECO26_2185 putative endolysin; PFAM: glycoside hydrolase family 24 YP_005277909.1 PFAM: Protein of unknown function DUF2514; KEGG: eoj:ECO26_2184 hypothetical protein YP_005277910.1 manually curated; KEGG: apo:Arcpr_0966 hypothetical protein YP_005277911.1 KEGG: efe:EFER_4442 cold shock protein; Qin prophage; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_005277912.1 manually curated; KEGG: eok:G2583_5204 hypothetical protein YP_005277913.1 PFAM: GnsAGnsB family protein; KEGG: eoj:ECO26_2181 hypothetical protein YP_005277914.1 PFAM: protein of unknown function DUF1398; KEGG: ebw:BWG_1368 Qin prophage; hypothetical protein YP_005277915.1 PFAM: DNA packaging Nu1; KEGG: ssn:SSON_2431 bacteriophage DNA packaging protein YP_005277916.1 PFAM: terminase GpA; KEGG: eoj:ECO26_0602 putative terminase large subunit YP_005277917.1 PFAM: Head-to-tail joining protein W gpW family protein; KEGG: ssn:SSON_2429 putative head-tail joining protein of prophage YP_005277918.1 KEGG: ssn:SSON_2428 putative capsid structural protein of prophage; TIGRFAM: phage portal protein, lambda family; PFAM: portal protein lambda YP_005277919.1 PFAM: peptidase S49; KEGG: eoh:ECO103_0541 putative head protein/prohead protease YP_005277920.1 PFAM: lambda head decoration protein D HDPD; KEGG: eoj:ECO26_2239 putative head-DNA stabilization protein YP_005277921.1 KEGG: ebd:ECBD_2868 major capsid protein E YP_005277922.1 KEGG: eoh:ECO103_0544 putative DNA packaging protein YP_005277923.1 PFAM: head-tail attachment protein; KEGG: ssn:SSON_2423 putative head-tail joining protein of prophage YP_005277924.1 PFAM: Prophage minor tail Z family protein; KEGG: ebd:ECBD_2865 prophage minor tail Z family protein YP_005277925.1 PFAM: minor tail U; KEGG: ebd:ECBD_2864 minor tail U YP_005277926.1 KEGG: ebd:ECBD_2863 Ig domain protein group 2 domain protein; PFAM: Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein YP_005277927.1 KEGG: ebd:ECBD_2862 phage minor tail protein G; TIGRFAM: phage minor tail protein G; PFAM: minor tail protein G YP_005277928.1 KEGG: ebd:ECBD_2861 phage tail assembly protein T; TIGRFAM: phage tail assembly protein T; PFAM: Minor tail T family protein YP_005277929.1 KEGG: eoj:ECO26_0619 putative tail length tape measure protein; TIGRFAM: phage tail tape measure protein, lambda family; PFAM: Prophage tail length tape measure YP_005277930.1 PFAM: minor tail family protein; KEGG: ebd:ECBD_2859 minor tail family protein YP_005277931.1 KEGG: eok:G2583_1922 minor tail protein; TIGRFAM: phage minor tail protein L; PFAM: minor tail protein L YP_005277932.1 PFAM: NLP/P60 protein; KEGG: eok:G2583_5225 putative tail fiber component K of prophage YP_005277933.1 PFAM: lambda tail assembly I; KEGG: eoj:ECO26_3159 putative tail assembly protein YP_005277934.1 KEGG: etw:ECSP_0861 putative tail component of prophage CP-933K; PFAM: protein of unknown function DUF1983; Fibronectin type III domain protein; SMART: Fibronectin type III domain protein YP_005277935.1 PFAM: virulence-related outer membrane protein; KEGG: eok:G2583_5229 hypothetical protein YP_005277936.1 PFAM: Prophage tail fibre domain protein; tail fiber repeat 2 protein; Tail Collar domain protein; KEGG: ssn:SSON_2410 phage protein-related YP_005277937.1 PFAM: tail assembly chaperone gp38; KEGG: ebw:BWG_1365 Qin prophage; putative tail fibre assembly protein YP_005277938.1 PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: ebw:BWG_1364 Qin prophage; putative site-specific recombinase YP_005277939.1 KEGG: ebd:ECBD_2249 uncharacterized protein YdfK YP_005277940.1 KEGG: ebd:ECBD_2096 metabolite/H+ symporter, major facilitator superfamily (MFS); TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: major facilitator superfamily MFS_1 YP_005277941.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: sfx:S1678 putative oxidoreductase YP_005277942.1 TIGRFAM: selenium-binding protein YdfZ; KEGG: sdy:SDY_1584 hypothetical protein YP_005277943.1 KEGG: ssn:SSON_1588 hypothetical protein; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_005277944.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sbo:SBO_1613 3-hydroxy acid dehydrogenase YP_005277945.1 KEGG: ssn:SSON_1590 dipeptidyl carboxypeptidase II; PFAM: peptidase M3A and M3B thimet/oligopeptidase F YP_005277946.1 PFAM: CinA domain protein; KEGG: eoi:ECO111_1940 competence damage-inducible protein A YP_005277947.1 PFAM: protein of unknown function DUF388, OB-fold; KEGG: ebw:BWG_1356 hypothetical protein YP_005277948.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: ebw:BWG_1355 hypothetical protein; SMART: GGDEF domain containing protein YP_005277949.1 KEGG: ebd:ECBD_2105 hypothetical protein YP_005277950.1 PFAM: major facilitator superfamily MFS_1; KEGG: eoj:ECO26_2142 putative MFS-type transporter YdeE YP_005277951.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: eoi:ECO111_1936 O-acetylserine/cysteine export protein YP_005277952.1 KEGG: eoh:ECO103_1670 putative transcriptional regulator; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_005277953.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: eoh:ECO103_1669 putative PTS system component, lactose/cellobiose specific IIB protein YP_005277954.1 TIGRFAM: PTS system, lactose/cellobiose family IIC subunit; KEGG: eoi:ECO111_1933 putative PTS system, cellobiose-specific IIC component; PFAM: phosphotransferase system EIIC YP_005277955.1 PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: eoh:ECO103_1666 putative PTS system component, lactose/cellobiose specific IIA protein YP_005277956.1 PFAM: porin LamB type; KEGG: eoh:ECO103_1665 putative outer membrane protein YP_005277957.1 PFAM: glycoside hydrolase family 1; KEGG: ssn:SSON_1595 6-phospho-beta-glucosidase YP_005277958.1 KEGG: sbo:SBO_1650 hypothetical protein YP_005277959.1 KEGG: sbc:SbBS512_E1674 DNA-binding transcriptional activator MarA; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_005277960.1 KEGG: sdy:SDY_1597 DNA-binding transcriptional repressor MarR; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_005277961.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: sdy:SDY_1598 multiple drug resistance protein MarC YP_005277962.1 PFAM: major facilitator superfamily MFS_1; KEGG: sbo:SBO_1646 sugar efflux transporter YP_005277963.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eoi:ECO111_1922 putative DNA-binding transcriptional regulator, LysR-type YP_005277964.1 PFAM: Aldehyde Dehydrogenase; KEGG: sbc:SbBS512_E1681 putative succinate semialdehyde dehydrogenase YP_005277965.1 TIGRFAM: Glutaminase, core; KEGG: sbc:SbBS512_E1682 glutaminase; PFAM: Glutaminase, core YP_005277966.1 KEGG: sbc:SbBS512_E1683 hypothetical protein YP_005277967.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: ebd:ECBD_2120 diguanylate cyclase; SMART: GGDEF domain containing protein YP_005277968.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: sfx:S1699 altronate oxidoreductase YP_005277969.1 manually curated; KEGG: ebw:BWG_1339 conserved inner membrane protein YP_005277970.1 KEGG: eoi:ECO111_1915 trans-aconitate 2-methyltransferase; PFAM: Methyltransferase type 11 YP_005277971.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: eoh:ECO103_1648 autoinducer-2 (AI-2) modifying protein LsrG YP_005277972.1 PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: eok:G2583_1882 hypothetical protein YP_005277973.1 KEGG: eoh:ECO103_1646 AI2 transporter protein LsrB, periplasmic-binding component of ABC superfamily YP_005277974.1 PFAM: inner-membrane translocator; KEGG: sfv:SFV_1570 putative transport system permease protein YP_005277975.1 PFAM: inner-membrane translocator; KEGG: eoh:ECO103_1644 AI2 transporter protein LsrC, membrane component of ABC superfamily YP_005277976.1 KEGG: eoh:ECO103_1643 fused AI2 transporter subunits of ABC superfamily: ATP-binding components; PFAM: ABC transporter related; SMART: AAA ATPase YP_005277977.1 PFAM: sugar-binding domain-containing protein; KEGG: eoh:ECO103_1642 putative DNA-binding transcriptional regulator YP_005277978.1 PFAM: Carbohydrate kinase, FGGY-like; KEGG: eoh:ECO103_1641 autoinducer-2 (AI-2) kinase YP_005277979.1 KEGG: eoh:ECO103_1640 putative lipoprotein/autotransporter domain-containing protein; TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: Autotransporter beta- domain protein; Pertactin YP_005277980.1 KEGG: ebd:ECBD_2129 hypothetical protein YP_005277981.1 KEGG: eok:G2583_1873 transcriptional regulator HipB; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_005277982.1 KEGG: eoi:ECO111_1899 regulator with HipB; TIGRFAM: HipA N-terminal domain protein; PFAM: HipA domain protein YP_005277983.1 PFAM: Fimbrial protein domain-containing protein; KEGG: eoi:ECO111_1897 putative type 1 fimbrial protein precursor YP_005277984.1 PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: eoi:ECO111_1896 putative fimbrial chaperone protein precursor YP_005277985.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: eoj:ECO26_2103 outer membrane usher protein YP_005277986.1 PFAM: Fimbrial protein domain-containing protein; KEGG: eok:G2583_1867 biofilm-dependent modulation protein YP_005277987.1 PFAM: Fimbrial protein domain-containing protein; KEGG: eok:G2583_1866 hypothetical protein YP_005277988.1 PFAM: FimH mannose-binding protein; Fimbrial protein domain-containing protein; KEGG: ssn:SSON_1621 putative adhesin YP_005277989.1 KEGG: eoh:ECO103_1628 putative oxidoreductase; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region YP_005277990.1 KEGG: sbo:SBO_1556 hypothetical protein YP_005277991.1 KEGG: sbc:SbBS512_E1762 transcriptional regulator YdeO; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_005277992.1 PFAM: sulfatase; KEGG: eoh:ECO103_1625 hypothetical protein YP_005277993.1 PFAM: Radical SAM domain protein; KEGG: eoh:ECO103_1624 hypothetical protein YP_005277994.1 manually curated; PFAM: ABC transporter related; ABC transporter domain-containing protein; KEGG: eoh:ECO103_1623 fused putative multidrug transporter subunits of ABC superfamily: membrane component/ATP-binding component; SMART: AAA ATPase YP_005277995.1 PFAM: TonB-dependent receptor plug; KEGG: ebw:BWG_1316 putative porin protein YP_005277996.1 PFAM: peptidase M16 domain protein; KEGG: eoi:ECO111_1884 putative peptidase YP_005277997.1 TIGRFAM: glutamate decarboxylase; KEGG: sbo:SBO_1563 glutamate decarboxylase isozyme; PFAM: Pyridoxal-dependent decarboxylase YP_005277998.1 KEGG: sbc:SbBS512_E1755 glutamate:gamma aminobutyrate antiporter; TIGRFAM: glutamate/g-aminobutyrate antiporter; PFAM: amino acid permease-associated region YP_005277999.1 PFAM: protein of unknown function DUF187; KEGG: ssn:SSON_1633 hypothetical protein YP_005278000.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: ebd:ECBD_2149 diguanylate cyclase; SMART: GGDEF domain containing protein YP_005278001.1 TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: eok:G2583_1852 FOG: PAS/PAC domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein YP_005278002.1 KEGG: ssn:SSON_1636 D-alanyl-D-alanine dipeptidase; PFAM: peptidase M15D vanX D-ala-D-ala dipeptidase YP_005278003.1 PFAM: extracellular solute-binding protein family 5; KEGG: eoi:ECO111_1877 D-ala-D-ala transporter subunit DdpA YP_005278004.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebw:BWG_1307 D-ala-D-ala transporter subunit YP_005278005.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebd:ECBD_2154 ATP-dependent peptide transporter membrane subunit YP_005278006.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: eok:G2583_1847 ABC transporter ATP-binding protein; SMART: AAA ATPase YP_005278007.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: eoi:ECO111_1873 D-ala-D-ala transporter subunit DdpF; SMART: AAA ATPase YP_005278008.1 TIGRFAM: peroxiredoxin, OsmC subfamily; KEGG: sfv:SFV_1739 osmotically inducible protein; PFAM: OsmC family protein YP_005278009.1 KEGG: sbc:SbBS512_E1744 biofilm-dependent modulation protein; manually curated; PFAM: Biofilm-dependent modulation protein Bdm, putative YP_005278010.1 PFAM: 30S ribosomal subunit S22; KEGG: sbc:SbBS512_E1743 30S ribosomal subunit S22 YP_005278011.1 PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: sfv:SFV_1742 malate dehydrogenase YP_005278012.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: eok:G2583_1841 Zn-dependent alcohol dehydrogenase YP_005278013.1 TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: sbc:SbBS512_E1740 addiction module antidote protein, HigA family; SMART: helix-turn-helix domain protein YP_005278014.1 TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: sbc:SbBS512_E1739 formate dehydrogenase-N subunit gamma YP_005278015.1 KEGG: sbo:SBO_1582 formate dehydrogenase N, nitrate-inducible, iron-sulfur beta subunit; TIGRFAM: formate dehydrogenase, beta subunit; PFAM: Formate dehydrogenase transmembrane domain protein YP_005278016.1 TIGRFAM: formate dehydrogenase, alpha subunit; KEGG: ssn:SSON_1650 formate dehydrogenase-N, nitrate-inducible, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region YP_005278017.1 PFAM: molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; KEGG: sbo:SBO_1583 formate dehydrogenase N, nitrate-inducible, alpha subunit YP_005278018.1 KEGG: eok:G2583_1836 hypothetical protein; manually curated; PFAM: protein of unknown function DUF6 transmembrane YP_005278019.1 PFAM: porin Gram-negative type; KEGG: sbo:SBO_1585 putative outer membrane porin protein YP_005278020.1 KEGG: eoi:ECO111_1861 T3SS effector-like protein EspR-homolog YP_005278021.1 KEGG: eoi:ECO111_1860 nitrate/nitrite transporter NarU; TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1 YP_005278022.1 TIGRFAM: nitrate reductase, alpha subunit; KEGG: eoh:ECO103_1598 nitrate reductase 2, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region YP_005278023.1 TIGRFAM: nitrate reductase, beta subunit; KEGG: eoi:ECO111_1858 nitrate reductase 2, beta subunit YP_005278024.1 TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; KEGG: ssn:SSON_1659 cryptic nitrate reductase 2, delta subunit, assembly function; PFAM: TorD-like chaperone YP_005278025.1 TIGRFAM: respiratory nitrate reductase, gamma subunit; KEGG: sdy:SDY_1653 cryptic nitrate reductase 2, gamma subunit; PFAM: Nitrate reductase gamma subunit YP_005278026.1 KEGG: eoh:ECO103_1594 hypothetical protein; TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein YP_005278027.1 KEGG: eoi:ECO111_1854 N-hydroxyarylamine O-acetyltransferase; PFAM: N-acetyltransferase YP_005278028.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: ebd:ECBD_2176 flavin reductase domain protein FMN-binding YP_005278029.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: ebd:ECBD_2177 4-oxalocrotonate tautomerase YP_005278030.1 KEGG: eok:G2583_1820 DsORF-e4 YP_005278031.1 KEGG: eoi:ECO111_1849 RhsE core protein with extension; TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein YP_005278032.1 TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; KEGG: ssn:SSON_1677 rhs element protein YP_005278033.1 KEGG: eoi:ECO111_1847 hypothetical protein YP_005278034.1 KEGG: eoi:ECO111_1846 putative enzyme YP_005278035.1 PFAM: amino acid permease-associated region; KEGG: ebd:ECBD_2186 amino acid permease-associated region YP_005278036.1 KEGG: sbc:SbBS512_E1724 hypothetical protein YP_005278037.1 PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: sbo:SBO_1596 putative outer membrane receptor for iron transport YP_005278038.1 KEGG: ebw:BWG_1276 putative DNA-binding transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_005278039.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: eoh:ECO103_1580 putative oxidoreductase, Zn-dependent and NAD(P)-binding YP_005278040.1 KEGG: ssn:SSON_1688 putative resistance protein; PFAM: GCN5-related N-acetyltransferase YP_005278041.1 PFAM: protein of unknown function DUF606; KEGG: sbo:SBO_1601 hypothetical protein YP_005278042.1 PFAM: Protein of unknown function DUF2526; KEGG: sbc:SbBS512_E1716 hypothetical protein YP_005278043.1 KEGG: sdy:SDY_1729 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2566 YP_005278044.1 KEGG: eok:G2583_1805 gamma-aminobutyraldehyde dehydrogenase; TIGRFAM: 1-pyrroline dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_005278045.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eoi:ECO111_1832 putative spermidine/putrescine transporter subunit YP_005278046.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eok:G2583_1803 ABC transporter permease protein YP_005278047.1 KEGG: ebd:ECBD_2198 ABC transporter related; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase YP_005278048.1 PFAM: extracellular solute-binding protein family 1; KEGG: ssn:SSON_1697 putative transport protein YP_005278049.1 KEGG: eoh:ECO103_1569 fused putative DNA-binding transcriptional regulator/putative amino transferase; PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_005278050.1 KEGG: ebd:ECBD_2201 transcriptional regulator, XRE family; PFAM: Uncharacterised protein family UPF0150; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_005278051.1 PFAM: YcfA family protein; KEGG: ebd:ECBD_2202 YcfA family protein YP_005278052.1 manually curated; KEGG: ssn:SSON_1702 hypothetical protein YP_005278053.1 KEGG: eok:G2583_1796 peptidase, U32 family; manually curated; PFAM: peptidase U32 YP_005278054.1 KEGG: ebd:ECBD_2205 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein YP_005278055.1 KEGG: ebd:ECBD_2206 benzoate transporter; TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein YP_005278056.1 KEGG: ssn:SSON_1709 putative virulence protein; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB YP_005278057.1 KEGG: ebd:ECBD_2209 uncharacterized lipoprotein YdcL YP_005278058.1 TIGRFAM: tellurite resistance protein TehB; KEGG: sdy:SDY_1747 tellurite resistance protein TehB YP_005278059.1 KEGG: ssn:SSON_1713 potassium-tellurite ethidium and proflavin transporter; TIGRFAM: C4-dicarboxylate transporter/malic acid transport protein; PFAM: C4-dicarboxylate transporter/malic acid transport protein YP_005278060.1 KEGG: eoj:ECO26_2026 putative enzyme YP_005278061.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eoi:ECO111_1816 ribosomal-protein-L7/L12-serine acetyltransferase YP_005278062.1 PFAM: protein of unknown function DUF465; KEGG: sfv:SFV_1780 hypothetical protein YP_005278063.1 KEGG: sbo:SBO_1663 glucan biosynthesis protein D; manually curated; PFAM: periplasmic glucan biosynthesis protein MdoG YP_005278064.1 PFAM: protein of unknown function DUF1338; KEGG: ssn:SSON_1719 hypothetical protein YP_005278065.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ssn:SSON_1720 putative transcriptional regulator LysR-type YP_005278066.1 KEGG: eoj:ECO26_2020 methyl-accepting chemotaxis protein III, riboseand galactose sensor receptor; PFAM: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein YP_005278067.1 KEGG: ebd:ECBD_2219 hypothetical protein YP_005278068.1 KEGG: sbc:SbBS512_E1643 hypothetical protein YP_005278069.1 KEGG: eoh:ECO103_1549 cytochrome b561 YP_005278070.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: ssn:SSON_1725 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YP_005278071.1 PFAM: Aldehyde Dehydrogenase; KEGG: eok:G2583_1777 aldehyde dehydrogenase A YP_005278072.1 PFAM: protein of unknown function DUF218; KEGG: ebd:ECBD_2226 protein of unknown function DUF218 YP_005278073.1 TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase-associated domain protein; helicase domain protein; protein of unknown function DUF1605; KEGG: eok:G2583_1771 HrpA-like helicase; SMART: DEAD-like helicase ; AAA ATPase; helicase domain protein YP_005278074.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: sbc:SbBS512_E1632 azoreductase YP_005278075.1 KEGG: ebd:ECBD_2229 putative dual specificity phosphatase; PFAM: Dual specificity protein phosphatase; phosphoesterase PA-phosphatase related; SMART: Dual specificity phosphatase, subgroup, catalytic domain; Protein-tyrosine phosphatase, catalytic YP_005278076.1 PFAM: alpha/beta hydrolase fold; KEGG: eoh:ECO103_1542 putative hydrolase YP_005278077.1 PFAM: phosphatidate cytidylyltransferase; KEGG: eoi:ECO111_1798 putative CDP-diglyceride synthase YP_005278078.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: eoh:ECO103_1540 putative inner membrane protein YP_005278079.1 KEGG: eoh:ECO103_1539 hypothetical protein YP_005278080.1 PFAM: aldo/keto reductase; KEGG: eoh:ECO103_1538 putative oxidoreductase YP_005278081.1 KEGG: eoj:ECO26_2004 putative hexapeptide repeat acetyltransferase; TIGRFAM: phenylacetic acid degradation protein PaaY; PFAM: transferase hexapeptide repeat containing protein YP_005278082.1 KEGG: eoi:ECO111_1793 transcriptional repressor for phenylacetic acid degradation; TIGRFAM: phenylacetic acid degradation operon negative regulatory protein PaaX; PFAM: PaaX domain protein domain; PaaX domain protein YP_005278083.1 TIGRFAM: phenylacetate-CoA ligase; KEGG: eoi:ECO111_1792 coenzyme A ligase; PFAM: AMP-dependent synthetase and ligase YP_005278084.1 KEGG: eoh:ECO103_1534 beta-ketoadipyl CoA thiolase; TIGRFAM: beta-ketoadipyl CoA thiolase; acetyl-CoA acetyltransferase; PFAM: Thiolase-like YP_005278085.1 KEGG: efe:EFER_1600 phenylacetate pathway hotdog-fold thioesterase; TIGRFAM: phenylacetic acid degradation protein PaaD; PFAM: thioesterase superfamily protein YP_005278086.1 KEGG: eoi:ECO111_1789 3-hydroxy-acyl-CoA dehydrogenase; TIGRFAM: 3-hydroxyacyl-CoA dehydrogenase PaaC; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein YP_005278087.1 KEGG: eoi:ECO111_1788 enoyl-CoA hydratase; TIGRFAM: phenylacetate degradation, enoyl-CoA hydratase paaB; PFAM: Enoyl-CoA hydratase/isomerase YP_005278088.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: eoh:ECO103_1530 enoyl-CoA hydratase-isomerase YP_005278089.1 KEGG: eoh:ECO103_1529 ferredoxin reductase electron transfer component; TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein YP_005278090.1 KEGG: eoh:ECO103_1528 putative multicomponent oxygenase/reductase subunit; TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59 YP_005278091.1 KEGG: eoi:ECO111_1784 putative multicomponent oxygenase/reductase subunit; TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein YP_005278092.1 KEGG: eoh:ECO103_1526 phenylacetate-CoA oxygenase subunit PaaB; TIGRFAM: phenylacetate-CoA oxygenase, PaaH subunit; PFAM: phenylacetic acid degradation B YP_005278093.1 KEGG: eoh:ECO103_1525 phenylacetate-CoA oxygenase subunit PaaA; TIGRFAM: phenylacetate-CoA oxygenase, PaaG subunit; PFAM: phenylacetic acid catabolic family protein YP_005278094.1 KEGG: ebw:BWG_1216 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; TIGRFAM: phenylacetic acid degradation protein paaN; PFAM: MaoC domain protein dehydratase; Aldehyde Dehydrogenase YP_005278095.1 KEGG: eoi:ECO111_1780 tyramine oxidase; PFAM: Copper amine oxidase domain-containing protein; Copper amine oxidase N3-terminal; Copper amine oxidase N2-terminal; copper amine oxidase-like domain-containing protein YP_005278096.1 PFAM: Aldehyde Dehydrogenase; KEGG: eoh:ECO103_1522 phenylacetaldehyde dehydrogenase YP_005278097.1 KEGG: ebw:BWG_1213 DNA-binding transcriptional activator FeaR; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_005278098.1 PFAM: Uncharacterised conserved protein UCP025560; KEGG: eoh:ECO103_1520 hypothetical protein YP_005278099.1 KEGG: eoi:ECO111_1775 putative lipoprotein YP_005278100.1 KEGG: eoi:ECO111_1774 hypothetical protein YP_005278101.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: sbc:SbBS512_E1618 D-lactate dehydrogenase YP_005278102.1 PFAM: protein of unknown function DUF306 Meta and HslJ; KEGG: sbc:SbBS512_E1616 heat-inducible protein YP_005278103.1 PFAM: protein of unknown function DUF333; KEGG: sdy:SDY_1462 hypothetical protein YP_005278104.1 KEGG: eoh:ECO103_1513 fused putative pyruvate-flavodoxin oxidoreductase: hypothetical protein/hypothetical protein/FeS binding protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein YP_005278105.1 PFAM: porin Gram-negative type; KEGG: ebd:ECBD_2247 porin gram-negative type YP_005278106.1 PFAM: UspA domain-containing protein; KEGG: eoh:ECO103_1511 stress-induced protein, ATP-binding protein YP_005278108.1 KEGG: cro:ROD_02391 putative phage tail fibre protein YP_005278109.1 PFAM: Prophage tail fibre domain protein; tail fiber repeat 2 protein; KEGG: sei:SPC_2700 Gifsy-2 prophage probable tail fiber protein YP_005278110.1 PFAM: tail assembly chaperone gp38; KEGG: sbo:SBO_0956 putative tail fiber assembly protein YP_005278111.1 KEGG: sbo:SBO_0647 putative tail fiber protein YP_005278112.1 KEGG: sed:SeD_A1122 hypothetical protein YP_005278113.1 KEGG: sed:SeD_A1121 hypothetical protein YP_005278114.1 KEGG: sbi:SORBI_10g007560 hypothetical protein YP_005278116.1 KEGG: sed:SeD_A1120 hypothetical protein YP_005278117.1 manually curated; KEGG: stt:t1872 putative bacteriophage protein YP_005278119.1 KEGG: bcj:BCAM1899 putative phage baseplate protein YP_005278120.1 KEGG: rcu:RCOM_0102660 hypothetical protein YP_005278121.1 KEGG: sed:SeD_A1117 hypothetical protein YP_005278122.1 KEGG: ent:Ent638_1044 hypothetical protein YP_005278123.1 PFAM: Lytic transglycosylase catalytic; KEGG: see:SNSL254_A1168 lytic transglycosylase, catalytic YP_005278124.1 KEGG: ent:Ent638_1042 hypothetical protein YP_005278125.1 KEGG: sed:SeD_A1111 hypothetical protein YP_005278126.1 KEGG: sed:SeD_A1110 hypothetical protein YP_005278127.1 KEGG: ent:Ent638_1039 hypothetical protein YP_005278128.1 KEGG: sed:SeD_A1108 hypothetical protein YP_005278129.1 KEGG: sed:SeD_A1107 hypothetical protein YP_005278130.1 KEGG: ent:Ent638_1036 hypothetical protein YP_005278131.1 KEGG: spq:SPAB_01008 hypothetical protein YP_005278132.1 KEGG: spq:SPAB_01007 hypothetical protein YP_005278133.1 KEGG: sed:SeD_A1103 NUDIX hydrolase YP_005278134.1 KEGG: ent:Ent638_1032 hypothetical protein YP_005278135.1 KEGG: sed:SeD_A1101 hypothetical protein YP_005278136.1 KEGG: spq:SPAB_01003 hypothetical protein YP_005278137.1 KEGG: kva:Kvar_2100 terminase small subunit YP_005278138.1 manually curated; KEGG: ypi:YpsIP31758_2229 hypothetical protein YP_005278139.1 KEGG: tgo:TGME49_104650 hypothetical protein YP_005278140.1 KEGG: ypi:YpsIP31758_2231 ParB family protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease YP_005278142.1 KEGG: set:SEN1396 putative phage encoded exported protein YP_005278143.1 KEGG: eok:G2583_2135 phage capsid scaffolding protein YP_005278144.1 PFAM: protein of unknown function DUF754; KEGG: set:SEN1394 putative prophage membrane protein YP_005278145.1 KEGG: cro:ROD_02691 putative prophage membrane protein YP_005278146.1 PFAM: protein of unknown function DUF1133; KEGG: set:SEN1391 hypothetical protein YP_005278147.1 PFAM: protein of unknown function DUF1364; KEGG: ssn:SSON_1777 putative bacteriophage protein YP_005278148.1 PFAM: protein of unknown function DUF1367; KEGG: ssn:SSON_1778 unknown protein encoded within prophage YP_005278149.1 PFAM: Hok/gef cell toxic protein; KEGG: sty:STY2054 hypothetical protein YP_005278150.1 KEGG: dat:HRM2_15030 hypothetical protein YP_005278151.1 KEGG: dat:HRM2_15020 putative ATP-dependent endonuclease (OLD family protein) YP_005278152.1 PFAM: protein of unknown function DUF262; KEGG: dat:HRM2_15010 hypothetical protein YP_005278153.1 PFAM: protein of unknown function DUF977; KEGG: sbc:SbBS512_E1436 hypothetical protein YP_005278154.1 PFAM: protein of unknown function DUF1627; KEGG: eoj:ECO26_1929 hypothetical protein YP_005278155.1 KEGG: ebw:BWG_1195 putative replication protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase YP_005278156.1 KEGG: ebw:BWG_1194 Rac prophage; hypothetical protein YP_005278157.1 PFAM: protein of unknown function DUF1019; KEGG: eoj:ECO26_1926 putative phage regulatory protein CII YP_005278158.1 KEGG: eoj:ECO26_1925 putative antirepressor Cro YP_005278159.1 KEGG: sbo:SBO_0973 putative transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_005278160.1 manually curated; KEGG: eoi:ECO111_1410 hypothetical protein YP_005278161.1 PFAM: protein of unknown function DUF1391; KEGG: ebd:ECBD_2262 protein of unknown function DUF1391 YP_005278162.1 KEGG: eoj:ECO26_2668 FtsZ inhibitor protein YP_005278163.1 KEGG: eoj:ECO26_2669 hypothetical protein YP_005278164.1 KEGG: ebd:ECBD_2266 hypothetical protein YP_005278165.1 PFAM: exodeoxyribonuclease VIII; KEGG: ebr:ECB_01327 exonuclease VIII YP_005278166.1 KEGG: ebd:ECBD_2268 recombination and repair protein RecT; TIGRFAM: RecT protein; PFAM: DNA single-strand annealing protein RecT-like YP_005278167.1 KEGG: eoj:ECO26_2673 restriction alleviation and modification protein; manually curated; TIGRFAM: restriction alleviation protein, Lar family YP_005278168.1 KEGG: ebd:ECBD_2269 hypothetical protein; manually curated; PFAM: protein of unknown function DUF1187 YP_005278169.1 PFAM: protein of unknown function DUF1233 excisionase; KEGG: ebd:ECBD_2270 protein of unknown function DUF1233 excisionase putative YP_005278170.1 PFAM: integrase family protein; KEGG: ebw:BWG_1179 Rac prophage; integrase YP_005278171.1 PFAM: PP-loop domain protein; KEGG: ssn:SSON_1787 C32 tRNA thiolase YP_005278172.1 KEGG: eoh:ECO103_1509 ATP-dependent RNA helicase DbpA; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_005278173.1 KEGG: ebd:ECBD_2274 hypothetical protein YP_005278174.1 PFAM: Mg2 transporter protein CorA family protein; KEGG: sdy:SDY_1424 zinc transporter YP_005278175.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-4 domain protein; KEGG: ebw:BWG_1175 putative diguanylate cyclase, GGDEF domain signalling protein; SMART: GGDEF domain containing protein; PAS domain containing protein; PAC repeat-containing protein YP_005278176.1 KEGG: ssn:SSON_1791 hypothetical protein; PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2 YP_005278177.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eoh:ECO103_1505 putative DNA-binding transcriptional regulator YP_005278178.1 KEGG: eoi:ECO111_1724 putative peptidase, aminobenzoyl-glutamate utilization protein AbgA; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_005278179.1 KEGG: ssn:SSON_1794 hypothetical protein; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_005278180.1 KEGG: eok:G2583_1684 aminobenzoyl-glutamate transport protein; TIGRFAM: AbgT transporter family; PFAM: AbgT transporter YP_005278181.1 KEGG: ssn:SSON_1798 O-6-alkylguanine-DNA:cysteine-protein methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylguanine DNA methyltransferase ribonuclease domain protein YP_005278182.1 KEGG: sbc:SbBS512_E1575 fumarate/nitrate reduction transcriptional regulator; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp YP_005278183.1 PFAM: UspA domain-containing protein; KEGG: ssn:SSON_1800 universal stress protein UspE YP_005278184.1 PFAM: Protein of unknown function DUF2534; KEGG: ssn:SSON_1801 hypothetical protein YP_005278185.1 PFAM: MscS Mechanosensitive ion channel; KEGG: sbc:SbBS512_E1570 transporter, small conductance mechanosensitive ion channel family YP_005278186.1 PFAM: extracellular solute-binding protein family 5; KEGG: ebd:ECBD_2287 extracellular solute-binding protein family 5 YP_005278187.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sbo:SBO_1734 putative transcriptional regulator LysR-type YP_005278188.1 KEGG: ssn:SSON_1806 hypothetical protein YP_005278189.1 KEGG: eok:G2583_1674 NmrA family protein YP_005278190.1 PFAM: peptidase M14 carboxypeptidase A; KEGG: sbo:SBO_1744 murein peptide amidase A YP_005278191.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: eoj:ECO26_1893 L-Ala-D/L-Glu epimerase YP_005278192.1 PFAM: Redoxin domain protein; KEGG: sdy:SDY_1402 thiol peroxidase YP_005278193.1 KEGG: eoh:ECO103_1488 DNA-binding transcriptional regulator TyrR; PFAM: sigma-54 factor interaction domain-containing protein; amino acid-binding ACT domain protein; SMART: AAA ATPase; PAS domain containing protein YP_005278194.1 PFAM: Uncharacterised protein family UPF0283; KEGG: sbc:SbBS512_E1555 hypothetical protein YP_005278195.1 PFAM: protein of unknown function DUF463 YcjX family protein; KEGG: eoh:ECO103_1486 hypothetical protein YP_005278196.1 KEGG: eoh:ECO103_1485 putative DNA-binding transcriptional regulator, LacI-type; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_005278197.1 PFAM: Outer membrane protein G; KEGG: ebd:ECBD_2298 hypothetical protein YP_005278198.1 KEGG: eoh:ECO103_1482 putative sugar transporter subunit; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase YP_005278199.1 KEGG: eoh:ECO103_1481 putative beta-phosphoglucomutase; TIGRFAM: beta-phosphoglucomutase; beta-phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_005278200.1 PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: eoh:ECO103_1480 putative hydrolase YP_005278201.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ebd:ECBD_2302 oxidoreductase domain protein YP_005278202.1 PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: ebd:ECBD_2303 xylose isomerase domain protein TIM barrel YP_005278203.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: sfv:SFV_1329 putative oxidoreductase YP_005278204.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ebd:ECBD_2305 binding-protein-dependent transport systems inner membrane component YP_005278205.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ssn:SSON_1829 putative binding-protein dependent transport protein YP_005278206.1 PFAM: extracellular solute-binding protein family 1; KEGG: eoi:ECO111_1694 putative sugar transporter subunit YP_005278207.1 KEGG: ebd:ECBD_2308 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_005278208.1 TIGRFAM: phage shock operon rhodanese PspE; PFAM: Rhodanese domain protein; KEGG: sbc:SbBS512_E1544 thiosulfate:cyanide sulfurtransferase; SMART: Rhodanese domain protein YP_005278209.1 KEGG: sdy:SDY_1937 peripheral inner membrane phage-shock protein; TIGRFAM: phage shock protein PspD; PFAM: shock protein PspD YP_005278210.1 KEGG: eoh:ECO103_1470 DNA-binding transcriptional activator PspC; TIGRFAM: phage shock protein C; PFAM: PspC domain protein YP_005278211.1 KEGG: sdy:SDY_1939 phage shock protein B; TIGRFAM: phage shock protein B; PFAM: shock B family protein YP_005278212.1 KEGG: sbc:SbBS512_E1540 phage shock protein PspA; TIGRFAM: phage shock protein A; PFAM: PspA/IM30 family protein YP_005278213.1 TIGRFAM: psp operon transcriptional activator; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; KEGG: eok:G2583_1650 PSP operon transcriptional activator; SMART: AAA ATPase YP_005278214.1 KEGG: sbo:SBO_1760 4-aminobutyrate transaminase; TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III YP_005278215.1 PFAM: FAD dependent oxidoreductase; KEGG: ebd:ECBD_2316 FAD dependent oxidoreductase YP_005278216.1 PFAM: Aldehyde Dehydrogenase; KEGG: sfv:SFV_1314 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase YP_005278217.1 KEGG: sdy:SDY_1945 DNA-binding transcriptional repressor PuuR; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_005278218.1 KEGG: eok:G2583_1645 gamma-glutamyl-gamma-aminobutyrate hydrolase; PFAM: peptidase C26 YP_005278219.1 PFAM: glutamine synthetase catalytic region; KEGG: eoi:ECO111_1680 gamma-Glu-putrescine synthase YP_005278220.1 PFAM: amino acid permease-associated region; KEGG: ebd:ECBD_2321 amino acid permease-associated region YP_005278221.1 KEGG: sdy:SDY_1637 hypothetical protein YP_005278222.1 PFAM: extracellular solute-binding protein family 5; KEGG: sbc:SbBS512_E1530 peptide ABC transporter, periplasmic peptide-binding protein YP_005278223.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbc:SbBS512_E1529 peptide ABC transporter, permease protein SapB YP_005278224.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbc:SbBS512_E1528 peptide ABC transporter, permease protein SapC YP_005278225.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: sbc:SbBS512_E1527 peptide ABC transporter, ATP-binding protein SapD; SMART: AAA ATPase YP_005278226.1 KEGG: sbc:SbBS512_E1526 peptide ABC transporter, ATP-binding protein SapF; PFAM: ABC transporter related; SMART: AAA ATPase YP_005278227.1 KEGG: eoh:ECO103_1453 hypothetical protein YP_005278228.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: sbo:SBO_1774 enoyl-(acyl carrier protein) reductase YP_005278229.1 KEGG: eoh:ECO103_1451 putative oxidoreductase YP_005278230.1 SMART: Cold shock protein; TIGRFAM: exoribonuclease II; VacB and RNase II family 3'-5' exoribonuclease; KEGG: eoh:ECO103_1450 exoribonuclease II; PFAM: ribonuclease II; Ribonuclease B OB region domain; RNA binding S1 domain protein YP_005278231.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; KEGG: eoh:ECO103_1449 RNase II stability modulator; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein YP_005278232.1 KEGG: sdy:SDY_1362 hypothetical protein YP_005278233.1 KEGG: sdy:SDY_1361 putative DeoR-type transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_005278234.1 KEGG: cro:ROD_17171 osmotically inducible lipoprotein B YP_005278235.1 KEGG: ssn:SSON_1858 translation initiation factor SUI1; TIGRFAM: translation initiation factor SUI1; PFAM: translation initiation factor SUI1 YP_005278236.1 TIGRFAM: orotidine 5'-phosphate decarboxylase; KEGG: ebd:ECBD_2338 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase YP_005278237.1 KEGG: sbc:SbBS512_E1508 tetratricopeptide repeat protein YP_005278238.1 KEGG: sbc:SbBS512_E1507 hypothetical protein YP_005278239.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: sdy:SDY_1354 phosphatidylglycerophosphatase B; SMART: phosphoesterase PA-phosphatase related YP_005278240.1 TIGRFAM: GTP cyclohydrolase II; KEGG: sbo:SBO_1787 GTP cyclohydrolase II; PFAM: GTP cyclohydrolase II YP_005278241.1 KEGG: eoi:ECO111_1657 aconitate hydratase; TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain-containing protein YP_005278242.1 KEGG: sdy:SDY_1349 hypothetical protein YP_005278243.1 KEGG: sdy:SDY_1348 hypothetical protein YP_005278244.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sbc:SbBS512_E1501 transcriptional regulator CysB YP_005278245.1 SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein; TIGRFAM: DNA topoisomerase I; KEGG: sbo:SBO_1792 DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; DNA topoisomerase type IA zn finger domain protein; DNA topoisomerase I zinc ribbon domain protein YP_005278246.1 PFAM: Protein of unknown function DUF2498; KEGG: sdy:SDY_1343 hypothetical protein YP_005278247.1 PFAM: Peptidase S49 domain protein; peptidase S49; KEGG: ssn:SSON_1871 putative periplasmic protease YP_005278248.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: eoh:ECO103_1432 short chain dehydrogenase YP_005278249.1 TIGRFAM: cob(I)alamin adenosyltransferase; KEGG: ssn:SSON_1873 cob(I)yrinic acid a,c-diamide adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP YP_005278250.1 KEGG: sbo:SBO_1797 23S rRNA pseudouridylate synthase B; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_005278251.1 KEGG: sbc:SbBS512_E1491 hypothetical protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain YP_005278252.1 KEGG: eoh:ECO103_1428 hypothetical protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein YP_005278253.1 KEGG: eoh:ECO103_1426 anthranilate synthase component I; TIGRFAM: anthranilate synthase component I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein YP_005278254.1 KEGG: ebd:ECBD_2359 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; TIGRFAM: anthranilate phosphoribosyltransferase; glutamine amidotransferase of anthranilate synthase; PFAM: glycosyl transferase family 3; glutamine amidotransferase class-I; Glycosyl transferase, family 3-like YP_005278255.1 KEGG: ebd:ECBD_2360 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase; PFAM: Indole-3-glycerol phosphate synthase; N-(5'phosphoribosyl)anthranilate isomerase (PRAI) YP_005278256.1 KEGG: sfv:SFV_1275 tryptophan synthase subunit beta; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_005278257.1 KEGG: eoh:ECO103_1422 tryptophan synthase subunit alpha; TIGRFAM: tryptophan synthase, alpha subunit; PFAM: tryptophan synthase alpha chain YP_005278258.1 PFAM: Stress-induced protein, KGG, repeat; KEGG: sfv:SFV_1273 hypothetical protein YP_005278259.1 PFAM: protein of unknown function DUF892; KEGG: eok:G2583_1597 YciF protein YP_005278260.1 PFAM: protein of unknown function DUF892; KEGG: eoh:ECO103_1419 hypothetical protein YP_005278261.1 PFAM: OmpW family protein; KEGG: sbo:SBO_1809 outer membrane protein W YP_005278262.1 PFAM: protein of unknown function UPF0259; KEGG: ssn:SSON_1911 hypothetical protein YP_005278263.1 KEGG: sbc:SbBS512_E1423 intracellular septation protein A; TIGRFAM: intracellular septation protein A; PFAM: Intracellular septation protein A YP_005278264.1 PFAM: thioesterase superfamily protein; KEGG: sdy:SDY_1317 acyl-CoA thioester hydrolase YP_005278265.1 KEGG: ebd:ECBD_2370 transport protein TonB; TIGRFAM: TonB family protein; PFAM: TonB domain YP_005278266.1 PFAM: YCII-related; KEGG: sbo:SBO_1814 YciI-like protein YP_005278267.1 PFAM: TrkA-N domain protein; Ion transport 2 domain protein; KEGG: sbo:SBO_1817 voltage-gated potassium channel YP_005278268.1 manually curated; KEGG: eok:G2583_1522 hypothetical protein YP_005278269.1 KEGG: ssn:SSON_1931 cardiolipin synthetase; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase YP_005278270.1 PFAM: protein of unknown function DUF440; KEGG: sdy:SDY_1306 dsDNA-mimic protein YP_005278271.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: sfv:SFV_1259 ATP-binding protein of oligopeptide ABC transport system; SMART: AAA ATPase YP_005278272.1 TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ebd:ECBD_2376 oligopeptide transporter ATP-binding component; SMART: AAA ATPase YP_005278273.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ssn:SSON_1935 oligopeptide transport permease protein-like protein YP_005278274.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbo:SBO_1823 oligopeptide transporter permease YP_005278275.1 PFAM: extracellular solute-binding protein family 5; KEGG: sbo:SBO_1824 oligopeptide transport periplasmic binding protein YP_005278276.1 manually curated; KEGG: ebd:ECBD_2380 hypothetical protein YP_005278277.1 KEGG: ebd:ECBD_2381 hypothetical protein YP_005278278.1 PFAM: multiple antibiotic resistance (MarC)-related protein; KEGG: ssn:SSON_1938 hypothetical protein YP_005278279.1 PFAM: iron-containing alcohol dehydrogenase; Aldehyde Dehydrogenase; KEGG: sdy:SDY_1295 bifunctional acetaldehyde-CoA/alcohol dehydrogenase YP_005278280.1 KEGG: sbo:SBO_1831 thymidine kinase; PFAM: thymidine kinase YP_005278281.1 KEGG: sdy:SDY_1289 global DNA-binding transcriptional dual regulator H-NS; PFAM: histone family protein nucleoid-structuring protein H-NS; SMART: histone family protein nucleoid-structuring protein H-NS YP_005278282.1 KEGG: sdy:SDY_1288 UTP--glucose-1-phosphate uridylyltransferase subunit GalU; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase YP_005278283.1 KEGG: eoi:ECO111_1563 response regulator of RpoS; PFAM: response regulator receiver; SMART: response regulator receiver YP_005278284.1 PFAM: Patatin; KEGG: eok:G2583_1508 phospholipase, patatin family YP_005278285.1 PFAM: SEC-C motif domain protein; KEGG: sbc:SbBS512_E1398 hypothetical protein YP_005278286.1 KEGG: sbo:SBO_1837 formyltetrahydrofolate deformylase; TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid-binding ACT domain protein YP_005278287.1 manually curated; KEGG: eoh:ECO103_1333 hypothetical protein YP_005278288.1 TIGRFAM: respiratory nitrate reductase, gamma subunit; KEGG: sbc:SbBS512_E1395 respiratory nitrate reductase 1, gamma subunit; PFAM: Nitrate reductase gamma subunit YP_005278289.1 TIGRFAM: nitrate reductase molybdenum cofactor assembly chaperone; KEGG: sbc:SbBS512_E1394 nitrate reductase molybdenum cofactor assembly chaperone 1; PFAM: TorD-like chaperone YP_005278290.1 TIGRFAM: nitrate reductase, beta subunit; KEGG: sbo:SBO_1841 nitrate reductase 1 beta subunit YP_005278291.1 KEGG: eoh:ECO103_1329 nitrate reductase 1, alpha subunit; TIGRFAM: nitrate reductase, alpha subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region YP_005278292.1 KEGG: sbc:SbBS512_E1391 nitrite extrusion protein 1; TIGRFAM: nitrite transporter; PFAM: major facilitator superfamily MFS_1 YP_005278293.1 KEGG: sbc:SbBS512_E1390 hypothetical protein YP_005278294.1 KEGG: sfv:SFV_1238 nitrate/nitrite sensor protein NarX; PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein YP_005278295.1 KEGG: sdy:SDY_1275 transcriptional regulator NarL; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_005278296.1 KEGG: eoh:ECO103_1325 hypothetical protein YP_005278297.1 PFAM: DsrE family protein; KEGG: sdy:SDY_1271 hypothetical protein YP_005278298.1 PFAM: ChaC family protein; KEGG: sbc:SbBS512_E1385 ChaC protein YP_005278299.1 PFAM: ChaB family protein; KEGG: sdy:SDY_1269 cation transport regulator YP_005278300.1 manually curated; TIGRFAM: calcium/proton exchanger; KEGG: sfv:SFV_1232 calcium/sodium:proton antiporter; PFAM: sodium/calcium exchanger membrane region YP_005278301.1 KEGG: ebr:ECB_01193 toxic polypeptide, small YP_005278302.1 KEGG: sdy:SDY_1264 2-dehydro-3-deoxyphosphooctonate aldolase; TIGRFAM: 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA YP_005278303.1 KEGG: sbc:SbBS512_E1378 putative transcriptional regulator YP_005278304.1 PFAM: Invasion gene expression up-regulator SirB; KEGG: sdy:SDY_1262 putative transcriptional regulator YP_005278305.1 KEGG: ssn:SSON_1966 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; PFAM: methyltransferase small YP_005278306.1 KEGG: sdy:SDY_1260 peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein YP_005278307.1 manually curated; TIGRFAM: glutamyl-tRNA reductase; KEGG: sfv:SFV_1224 glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; Shikimate/quinate 5-dehydrogenase YP_005278308.1 manually curated; TIGRFAM: outer membrane lipoprotein LolB; KEGG: sbo:SBO_1858 outer membrane lipoprotein LolB; PFAM: outer membrane lipoprotein LolB YP_005278309.1 TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: sbc:SbBS512_E1372 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein YP_005278310.1 TIGRFAM: ribose-phosphate pyrophosphokinase; KEGG: ebd:ECBD_2414 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_005278311.1 KEGG: sdy:SDY_1255 putative sulfate transporter YchM; TIGRFAM: sulfate transporter; PFAM: sulphate transporter; Sulfate transporter/antisigma-factor antagonist STAS YP_005278312.1 PFAM: Protein of unknown function DUF2583; KEGG: sbc:SbBS512_E1369 hypothetical protein YP_005278313.1 TIGRFAM: peptidyl-tRNA hydrolase; KEGG: ssn:SSON_1974 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase YP_005278314.1 KEGG: sdy:SDY_1252 GTP-dependent nucleic acid-binding protein EngD; TIGRFAM: GTP-binding protein YchF; PFAM: protein of unknown function DUF933; GTP-binding protein HSR1-related YP_005278315.1 manually curated; KEGG: ssn:SSON_1976 hypothetical protein YP_005278316.1 KEGG: eoi:ECO111_1531 putative adhesin; TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Pertactin; Autotransporter beta- domain protein YP_005278317.1 KEGG: ebd:ECBD_2421 DNA-binding transcriptional regulator DhaR; PFAM: sigma-54 factor interaction domain-containing protein; PAS fold domain protein; GAF domain protein; helix-turn-helix Fis-type; SMART: PAS domain containing protein; AAA ATPase YP_005278318.1 TIGRFAM: dihydroxyacetone kinase, DhaK subunit; KEGG: eoi:ECO111_1529 dihydroxyacetone kinase subunit DhaK; PFAM: Dak kinase YP_005278319.1 KEGG: eoh:ECO103_1301 dihydroxyacetone kinase subunit DhaL; TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase YP_005278320.1 KEGG: eoi:ECO111_1527 dihydroxyacetone kinase subunit M; TIGRFAM: dihydroxyacetone kinase, phosphotransfer subunit; phosphocarrier, HPr family; PFAM: PEP-utilising protein domain protein; PTS system fructose subfamily IIA component; phosphoryl transfer system HPr; PEP-utilising protein mobile region YP_005278321.1 KEGG: eoh:ECO103_1299 trehalase; PFAM: glycoside hydrolase family 37 YP_005278322.1 manually curated; KEGG: ebd:ECBD_2426 hypothetical protein YP_005278323.1 PFAM: Transglycosylase-associated protein; KEGG: ebd:ECBD_2427 transglycosylase-associated protein YP_005278324.1 PFAM: YcgR family protein; type IV pilus assembly PilZ; KEGG: sbo:SBO_1878 hypothetical protein YP_005278325.1 PFAM: Lytic transglycosylase catalytic; KEGG: sbc:SbBS512_E1351 membrane-bound lytic murein transglycosylase E YP_005278326.1 KEGG: eoh:ECO103_1294 L,D-carboxypeptidase A; PFAM: peptidase U61 LD-carboxypeptidase A YP_005278327.1 PFAM: sodium/hydrogen exchanger; TrkA-C domain protein; transporter-associated region; KEGG: sbc:SbBS512_E1349 potassium/proton antiporter YP_005278329.1 TIGRFAM: alanine racemase; KEGG: eoh:ECO103_1292 alanine racemase; PFAM: alanine racemase domain protein YP_005278330.1 PFAM: FAD dependent oxidoreductase; KEGG: ssn:SSON_1181 D-amino acid dehydrogenase small subunit YP_005278331.1 PFAM: SpoVR family protein; KEGG: ebd:ECBD_2434 SpoVR family protein YP_005278332.1 TIGRFAM: fatty acid metabolism transcriptional regulator FadR; PFAM: fatty acid responsive transcription factor FadR domain protein; regulatory protein GntR HTH; KEGG: sdy:SDY_1224 fatty acid metabolism regulator; SMART: regulatory protein GntR HTH YP_005278333.1 KEGG: sdy:SDY_1223 sodium/proton antiporter; TIGRFAM: Na+/H+ antiporter NhaB; PFAM: Na+H+ antiporter NhaB YP_005278334.1 PFAM: Disulphide bond formation protein DsbB; KEGG: sfv:SFV_1192 disulfide bond formation protein B YP_005278335.1 KEGG: ebd:ECBD_2438 DNA polymerase V subunit UmuC; PFAM: UMUC domain protein DNA-repair protein YP_005278336.1 PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: sbc:SbBS512_E1340 DNA polymerase V subunit UmuD YP_005278337.1 KEGG: eok:G2583_1441 hypothetical protein; manually curated; PFAM: protein of unknown function UPF0153 YP_005278338.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: sbc:SbBS512_E1335 hypothetical protein YP_005278339.1 KEGG: sbo:SBO_1165 hypothetical protein; manually curated; PFAM: protein of unknown function DUF709 YP_005278340.1 PFAM: peptidase domain protein; KEGG: ssn:SSON_1167 hypothetical protein YP_005278341.1 PFAM: Fels-1 Propage domain protein; KEGG: sbc:SbBS512_E1331 putative fels-1 prophage protein YP_005278342.1 KEGG: sdy:SDY_1207 septum formation inhibitor; TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC YP_005278343.1 TIGRFAM: septum site-determining protein MinD; KEGG: sdy:SDY_1206 cell division inhibitor MinD YP_005278344.1 KEGG: sdy:SDY_1205 cell division topological specificity factor MinE; TIGRFAM: cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE YP_005278345.1 KEGG: eoh:ECO103_1274 hypothetical protein; manually curated; PFAM: Autotransporter beta- domain protein YP_005278346.1 manually curated; KEGG: eok:G2583_1430 hypothetical protein YP_005278347.1 KEGG: sbc:SbBS512_E1325 hypothetical protein YP_005278348.1 KEGG: sbc:SbBS512_E1324 hypothetical protein YP_005278349.1 KEGG: ebd:ECBD_2453 uncharacterized protein YmgF YP_005278350.1 KEGG: eoh:ECO103_1269 hypothetical protein; PFAM: EAL domain protein; SMART: EAL domain protein YP_005278351.1 KEGG: ebd:ECBD_2455 uncharacterized protein YmgC YP_005278352.1 KEGG: ebd:ECBD_2456 hypothetical protein YP_005278353.1 manually curated; KEGG: eoh:ECO103_1266 hypothetical protein YP_005278354.1 KEGG: eoh:ECO103_1265 hypothetical protein YP_005278355.1 KEGG: eoh:ECO103_1264 putative FAD-binding phosphodiesterase; PFAM: EAL domain protein; BLUF domain protein; SMART: EAL domain protein YP_005278356.1 KEGG: sbc:SbBS512_E1317 transcriptional regulator MlrA; PFAM: regulatory protein MerR; SMART: regulatory protein MerR YP_005278357.1 PFAM: protein of unknown function DUF1398; KEGG: ebd:ECBD_2461 protein of unknown function DUF1398 YP_005278358.1 manually curated; KEGG: eoh:ECO103_1261 hypothetical protein YP_005278359.1 TIGRFAM: isocitrate dehydrogenase, NADP-dependent; KEGG: sfv:SFV_1171 isocitrate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_005278360.1 PFAM: pseudouridine synthase; KEGG: eoh:ECO103_1259 23S rRNA pseudouridine synthase E YP_005278361.1 PFAM: NUDIX hydrolase; KEGG: sdy:SDY_2018 putative phosphohydrolase YP_005278362.1 TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; KEGG: ebd:ECBD_2466 tRNA-specific 2-thiouridylase MnmA YP_005278363.1 PFAM: protein of unknown function DUF489; KEGG: sdy:SDY_2020 hypothetical protein YP_005278364.1 KEGG: sbc:SbBS512_E1309 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase domain-containing protein YP_005278365.1 KEGG: sdy:SDY_2022 DNA-binding transcriptional regulator PhoP; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_005278366.1 KEGG: sbc:SbBS512_E1307 sensor protein PhoQ; PFAM: PhoQ Sensor domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_005278367.1 SMART: transcription factor jumonji jmjC domain-containing protein; KEGG: eoh:ECO103_1235 putative cytoplasmic protein YP_005278368.1 TIGRFAM: peptidase T; KEGG: eoi:ECO111_1475 peptidase T; PFAM: peptidase dimerisation domain protein; peptidase M20 YP_005278369.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; KEGG: sfx:S1208 putrescine/spermidine ABC transporter ATPase protein; SMART: AAA ATPase YP_005278370.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ssn:SSON_1143 spermidine/putrescine ABC transporter membrane protein YP_005278371.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbc:SbBS512_E2201 spermidine/putrescine ABC transporter membrane protein YP_005278372.1 PFAM: extracellular solute-binding protein family 1; KEGG: eoh:ECO103_1168 spermidine/putrescine ABC transporter periplasmic substrate-binding protein YP_005278373.1 KEGG: eoh:ECO103_1167 putative inner membrane protein YP_005278374.1 KEGG: eoh:ECO103_1166 putative inner membrane protein YP_005278375.1 PFAM: Silent information regulator protein Sir2; KEGG: sbo:SBO_1941 NAD-dependent deacetylase YP_005278376.1 PFAM: ROK family protein; KEGG: sdy:SDY_2031 N-acetyl-D-glucosamine kinase YP_005278377.1 KEGG: eoh:ECO103_1163 outer membrane-specific lipoprotein transporter subunit LolE; TIGRFAM: lipoprotein releasing system, transmembrane protein LolE; lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214 YP_005278378.1 TIGRFAM: lipoprotein releasing system, ATP-binding protein; PFAM: ABC transporter related; KEGG: sbc:SbBS512_E2206 lipoprotein transporter ATP-binding subunit; SMART: AAA ATPase YP_005278379.1 KEGG: eoh:ECO103_1161 outer membrane-specific lipoprotein transporter subunit LolC; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: protein of unknown function DUF214 YP_005278380.1 PFAM: acyltransferase 3; KEGG: ebw:BWG_0963 putative inner membrane protein YP_005278381.1 TIGRFAM: transcription-repair coupling factor; PFAM: TRCF domain protein; transcription factor CarD; DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: sfv:SFV_1134 transcription-repair coupling factor; SMART: DEAD-like helicase ; helicase domain protein YP_005278382.1 KEGG: eoh:ECO103_1158 hypothetical protein; PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM YP_005278383.1 PFAM: protein of unknown function DUF1471; KEGG: sdy:SDY_2038 hypothetical protein YP_005278384.1 PFAM: regulatory protein TetR; KEGG: sdy:SDY_2039 hypothetical protein YP_005278385.1 KEGG: sdy:SDY_2040 hypothetical protein YP_005278386.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: eoi:ECO111_1386 respiratory NADH dehydrogenase 2/cupric reductase YP_005278387.1 PFAM: protein of unknown function UPF0227; KEGG: sdy:SDY_2042 hypothetical protein YP_005278388.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: eoi:ECO111_1384 beta-hexosaminidase YP_005278389.1 TIGRFAM: thiamine kinase; KEGG: eoh:ECO103_1151 thiamine kinase; PFAM: aminoglycoside phosphotransferase YP_005278390.1 TIGRFAM: membrane lipoprotein lipid attachment site; KEGG: sdy:SDY_2045 hypothetical protein YP_005278391.1 PFAM: protein of unknown function DUF1425; KEGG: eok:G2583_1364 putative outer membrane lipoprotein YcfL YP_005278392.1 PFAM: histidine triad (HIT) protein; KEGG: eok:G2583_1363 hypothetical protein YP_005278393.1 KEGG: eoh:ECO103_1147 ferric-rhodotorulic acid outer membrane transporter; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_005278394.1 TIGRFAM: PTS system, glucose-specific IIBC subunit; PTS system, maltose and glucose-specific subfamily, IIC subunit; PTS system, glucose-like IIB subunint; KEGG: sdy:SDY_2049 glucose-specific PTS system IIBC components; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site YP_005278395.1 KEGG: sdy:SDY_2050 putative metallodependent hydrolase; TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease YP_005278396.1 KEGG: ebd:ECBD_2502 DNA polymerase III subunit delta'; TIGRFAM: DNA polymerase III, delta prime subunit; PFAM: DNA polymerase III delta subunit YP_005278397.1 TIGRFAM: thymidylate kinase; KEGG: sdy:SDY_2052 thymidylate kinase; PFAM: thymidylate kinase YP_005278398.1 PFAM: aminodeoxychorismate lyase; KEGG: sbc:SbBS512_E2227 hypothetical protein YP_005278399.1 KEGG: ebd:ECBD_2505 4-amino-4-deoxychorismate lyase; TIGRFAM: aminodeoxychorismate lyase; PFAM: aminotransferase class IV YP_005278400.1 KEGG: sfv:SFV_1115 3-oxoacyl-(acyl carrier protein) synthase II; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase YP_005278401.1 KEGG: sbc:SbBS512_E2231 3-ketoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_005278402.1 KEGG: sbc:SbBS512_E2232 malonyl CoA-acyl carrier protein transacylase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase YP_005278403.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; KEGG: sbc:SbBS512_E2233 3-oxoacyl-(acyl carrier protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YP_005278404.1 KEGG: ssn:SSON_1110 putative glycerol-3-phosphate acyltransferase PlsX; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein YP_005278405.1 KEGG: cro:ROD_11511 50S ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein YP_005278406.1 PFAM: protein of unknown function DUF177; KEGG: sdy:SDY_2062 hypothetical protein YP_005278407.1 KEGG: sfv:SFV_1108 Maf-like protein; TIGRFAM: maf protein; PFAM: Maf family protein YP_005278408.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: sfx:S1170 23S rRNA pseudouridylate synthase C; SMART: RNA-binding S4 domain protein YP_005278409.1 KEGG: eoi:ECO111_1361 ribonuclease E; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein; Polyribonucleotide phosphorylase-like YP_005278410.1 KEGG: eoh:ECO103_1128 flagellar hook-associated protein FlgL; TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein YP_005278411.1 KEGG: ebd:ECBD_2518 flagellar hook-associated protein FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_005278412.1 TIGRFAM: flagellar rod assembly protein/muramidase FlgJ; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Flagellar protein FlgJ-like; KEGG: ssn:SSON_1101 flagellar rod assembly protein/muramidase FlgJ; SMART: Lysozyme subfamily 2 YP_005278413.1 PFAM: flagellar P-ring protein; KEGG: eok:G2583_1339 flagellar basal body P-ring protein YP_005278414.1 PFAM: flagellar L-ring protein; KEGG: ssn:SSON_1099 flagellar basal body L-ring protein YP_005278415.1 KEGG: sfv:SFV_1100 flagellar basal body rod protein FlgG; TIGRFAM: flagellar basal-body rod protein FlgG; fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_005278416.1 KEGG: sfv:SFV_1099 flagellar basal body rod protein FlgF; TIGRFAM: flagellar basal-body rod protein FlgF; fagellar hook-basal body protein; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein YP_005278417.1 KEGG: ebw:BWG_0924 flagellar hook protein FlgE; TIGRFAM: fagellar hook-basal body protein; PFAM: flagellar basal body FlaE domain protein; flagellar basal body rod protein; protein of unknown function DUF1078 domain protein YP_005278418.1 PFAM: flagellar hook capping protein; KEGG: eok:G2583_1334 flagellar hook protein FlgE YP_005278419.1 KEGG: sbc:SbBS512_E2251 flagellar basal body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein YP_005278420.1 KEGG: sbc:SbBS512_E2252 flagellar basal body rod protein FlgB; TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein YP_005278421.1 KEGG: eok:G2583_1331 flagellar biosynthesis; TIGRFAM: flagella basal body P-ring formation protein FlgA; PFAM: SAF domain protein YP_005278422.1 KEGG: sdy:SDY_2081 anti-sigma28 factor FlgM; TIGRFAM: Anti-sigma-28 factor FlgM family protein; PFAM: Anti-sigma-28 factor FlgM family protein YP_005278423.1 PFAM: FlgN family protein; KEGG: sbc:SbBS512_E2256 flagella synthesis protein FlgN YP_005278424.1 KEGG: sbc:SbBS512_E2257 integral membrane protein MviN; TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein YP_005278425.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ebd:ECBD_2532 virulence factor MviM-like protein YP_005278426.1 PFAM: protein of unknown function DUF480; KEGG: ssn:SSON_1087 hypothetical protein YP_005278427.1 KEGG: sbc:SbBS512_E2260 ribosomal-protein-S5-alanine N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_005278428.1 PFAM: major facilitator superfamily MFS_1; KEGG: sbc:SbBS512_E2261 multidrug resistance protein MdtH YP_005278429.1 KEGG: sbc:SbBS512_E2262 glutaredoxin 2; TIGRFAM: glutaredoxin, GrxB family; PFAM: glutaredoxin 2 domain protein; Glutathione S-transferase domain YP_005278430.1 KEGG: sbc:SbBS512_E2264 hypothetical protein YP_005278431.1 TIGRFAM: dihydroorotase, homodimeric type; KEGG: eoh:ECO103_1107 dihydroorotase; PFAM: amidohydrolase YP_005278432.1 PFAM: DinI family protein; KEGG: ssn:SSON_1081 DNA damage-inducible protein I YP_005278433.1 KEGG: sbc:SbBS512_E2267 biofilm formation regulatory protein BssS YP_005278434.1 KEGG: sbc:SbBS512_E2268 N-methyltryptophan oxidase; PFAM: FAD dependent oxidoreductase YP_005278435.1 KEGG: sdy:SDY_2097 hypothetical protein YP_005278436.1 manually curated; KEGG: sfv:SFV_1080 putative cytochrome YP_005278437.1 PFAM: YceI family protein; KEGG: sbc:SbBS512_E2272 hypothetical protein YP_005278438.1 KEGG: sfv:SFV_1078 hypothetical protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_005278439.1 KEGG: sbc:SbBS512_E2276 lipid A biosynthesis lauroyl acyltransferase; TIGRFAM: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase; PFAM: lipid A biosynthesis acyltransferase YP_005278440.1 PFAM: major facilitator superfamily MFS_1; KEGG: ebd:ECBD_2547 drug efflux system protein MdtG YP_005278441.1 KEGG: sdy:SDY_2299 hypothetical protein YP_005278442.1 PFAM: protein of unknown function DUF1375; KEGG: ssn:SSON_1064 hypothetical protein YP_005278443.1 KEGG: ssn:SSON_1062 glucosyltransferase MdoH; manually curated; PFAM: glycosyl transferase family 2 YP_005278444.1 PFAM: periplasmic glucan biosynthesis protein MdoG; KEGG: sbc:SbBS512_E2282 glucan biosynthesis protein G YP_005278445.1 PFAM: acyltransferase 3; KEGG: ssn:SSON_1060 glucans biosynthesis protein YP_005278446.1 KEGG: ebd:ECBD_2553 phospholipase D/transphosphatidylase; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase YP_005278447.1 KEGG: eoh:ECO103_1091 hypothetical protein; PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein YP_005278448.1 KEGG: eoh:ECO103_1090 hypothetical protein YP_005278449.1 PFAM: Curli production protein CsgC; KEGG: eoh:ECO103_1089 putative autoagglutination protein YP_005278450.1 PFAM: Curlin associated repeat-containing protein; KEGG: sbo:SBO_2026 cryptic curlin major subunit YP_005278451.1 PFAM: Curlin associated repeat-containing protein; KEGG: ebd:ECBD_2558 curlin minor subunit YP_005278452.1 KEGG: sfv:SFV_1051 DNA-binding transcriptional regulator CsgD; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_005278453.1 PFAM: Curli assembly protein CsgE; KEGG: ssn:SSON_1048 curli assembly protein CsgE YP_005278454.1 PFAM: Curli production assembly/transport component CsgF; KEGG: ssn:SSON_1047 curli assembly protein CsgF YP_005278455.1 PFAM: Curli production assembly/transport component CsgG; KEGG: ebd:ECBD_2562 curli production assembly/transport component CsgG YP_005278456.1 PFAM: protein of unknown function DUF1097; KEGG: sbo:SBO_2032 hypothetical protein YP_005278457.1 KEGG: sbc:SbBS512_E2294 chaperone, TorD family YP_005278458.1 KEGG: sbc:SbBS512_E2295 putative hydrolase; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein YP_005278459.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: ssn:SSON_1042 putative dehydrogenase YP_005278460.1 KEGG: eoh:ECO103_1077 putative inner membrane protein YP_005278461.1 KEGG: eok:G2583_1288 malonyl CoA-acyl carrier protein transacylase YP_005278462.1 PFAM: transposase IS3/IS911 family protein; KEGG: cro:ROD_49861 IS3 transposase A YP_005278463.1 PFAM: Integrase catalytic region; KEGG: cro:ROD_49871 IS3 transposase B YP_005278464.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: eoh:ECO103_1072 putative diguanylate cyclase; SMART: GGDEF domain containing protein YP_005278465.1 SMART: Tetratricopeptide repeat; KEGG: ebd:ECBD_2570 outer membrane protein PgaA YP_005278466.1 PFAM: polysaccharide deacetylase; KEGG: ebd:ECBD_2571 outer membrane N-deacetylase YP_005278467.1 PFAM: glycosyl transferase family 2; KEGG: ebd:ECBD_2572 N-glycosyltransferase YP_005278468.1 KEGG: sfv:SFV_1032 putative PGA biosynthesis protein YP_005278469.1 PFAM: PhoH family protein; KEGG: ebd:ECBD_2574 hypothetical protein YP_005278470.1 KEGG: eoj:ECO26_1256 hypothetical protein; TIGRFAM: Dyp-type peroxidase family; PFAM: Dyp-type peroxidase YP_005278471.1 PFAM: Peptidase M75, Imelysin; KEGG: eoh:ECO103_1063 hypothetical protein YP_005278472.1 KEGG: ssn:SSON_1036 high-affinity iron permease; TIGRFAM: FTR1 family protein; PFAM: iron permease FTR1 YP_005278473.1 KEGG: sbo:SBO_2042 major sodium/proline symporter; TIGRFAM: sodium/proline symporter; SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter YP_005278474.1 KEGG: eoi:ECO111_1203 trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Proline dehydrogenase; Aldehyde Dehydrogenase YP_005278475.1 KEGG: sbc:SbBS512_E2305 transcriptional regulator RutR; TIGRFAM: pyrimidine utilization regulatory protein R; PFAM: Tetracycline transcriptional regulator YcdC domain-containing protein; regulatory protein TetR YP_005278476.1 KEGG: eoh:ECO103_1058 putative monooxygenase; TIGRFAM: pyrimidine utilization protein A; PFAM: Luciferase-like, subgroup YP_005278477.1 KEGG: ssn:SSON_1030 putative synthetase; TIGRFAM: pyrimidine utilization protein B; PFAM: isochorismatase hydrolase YP_005278478.1 KEGG: eoi:ECO111_1199 hypothetical protein; TIGRFAM: pyrimidine utilization protein C; PFAM: Endoribonuclease L-PSP YP_005278479.1 KEGG: eoi:ECO111_1198 putative hydrolase; TIGRFAM: pyrimidine utilization protein D; PFAM: alpha/beta hydrolase fold YP_005278480.1 PFAM: nitroreductase; KEGG: eoi:ECO111_1197 hypothetical protein YP_005278481.1 KEGG: ebd:ECBD_2587 flavin reductase domain protein FMN-binding; TIGRFAM: pyrimidine utilization flavin reductase protein F; PFAM: flavin reductase domain protein FMN-binding YP_005278482.1 KEGG: eoi:ECO111_1195 putative transporter; TIGRFAM: pyrimidine utilization transport protein G; uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease YP_005278483.1 KEGG: ebd:ECBD_2589 uncharacterized protein YmdF; manually curated; PFAM: Stress-induced protein, KGG, repeat YP_005278484.1 KEGG: sfv:SFV_1016 TrpR binding protein WrbA; TIGRFAM: flavoprotein WrbA; PFAM: flavodoxin/nitric oxide synthase YP_005278485.1 KEGG: sdy:SDY_0979 hypothetical protein YP_005278486.1 KEGG: eoh:ECO103_1048 glucose-1-phosphatase/inositol phosphatase; PFAM: histidine acid phosphatase YP_005278487.1 KEGG: sbo:SBO_2231 curved DNA-binding protein CbpA; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_005278488.1 KEGG: sbc:SbBS512_E2315 chaperone-modulator protein CbpM YP_005278489.1 KEGG: eoi:ECO111_1109 chaperone protein TorD YP_005278490.1 TIGRFAM: trimethylamine-N-oxide reductase TorA; molybdopterin guanine dinucleotide-containing S/N-oxide reductase; KEGG: eoi:ECO111_1108 trimethylamine N-oxide reductase I, catalytic subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region YP_005278491.1 KEGG: efe:EFER_1191 trimethylamine N-oxide (TMAO) reductase I, cytochrome c-type subunit; TIGRFAM: trimethylamine-N-oxide reductase c-type cytochrome TorC; PFAM: NapC/NirT cytochrome c domain protein YP_005278492.1 KEGG: sbc:SbBS512_E2320 DNA-binding transcriptional regulator TorR; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_005278493.1 KEGG: ssn:SSON_1002 TMAO reductase system periplasmic protein TorT; TIGRFAM: TMAO reductase system periplasmic protein TorT; PFAM: periplasmic binding protein/LacI transcriptional regulator YP_005278494.1 TIGRFAM: TMAO reductase sytem sensor TorS; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; response regulator receiver; Hpt domain protein; KEGG: ebw:BWG_0847 hybrid sensory histidine kinase TorS; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; response regulator receiver; Hpt domain protein YP_005278495.1 KEGG: ebd:ECBD_2602 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_005278496.1 PFAM: GnsAGnsB family protein; KEGG: sbc:SbBS512_E2323 transcriptional regulator, GnsA/GnsB family YP_005278497.1 manually curated; KEGG: eoi:ECO111_1101 cold shock gene YP_005278498.1 KEGG: sbc:SbBS512_E2326 cold shock protein CspG; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_005278499.1 manually curated; PFAM: Cold-shock protein DNA-binding; KEGG: sdy:SDY_0964 cold shock-like protein; SMART: Cold shock protein YP_005278500.1 KEGG: sbc:SbBS512_E2328 putative inner membrane protein YP_005278501.1 KEGG: sbc:SbBS512_E2329 group 4 capsule (G4C) polysaccharide, lipoprotein YmcC YP_005278502.1 PFAM: protein of unknown function DUF1017; KEGG: ssn:SSON_0992 hypothetical protein YP_005278503.1 PFAM: protein of unknown function DUF940 membrane lipoprotein; KEGG: eoi:ECO111_1095 hypothetical protein YP_005278504.1 PFAM: polysaccharide export protein; Soluble ligand binding domain; KEGG: ssn:SSON_0990 putative function in exopolysaccharide production YP_005278505.1 KEGG: sdy:SDY_0958 phosphotyrosine-protein phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight YP_005278506.1 TIGRFAM: capsular exopolysaccharide family; KEGG: sbo:SBO_2249 cryptic autophosphorylating protein tyrosine kinase Etk; PFAM: lipopolysaccharide biosynthesis protein YP_005278507.1 KEGG: ssn:SSON_0987 phosphoanhydride phosphorylase; PFAM: histidine acid phosphatase YP_005278508.1 PFAM: membrane bound YbgT family protein; KEGG: sbo:SBO_2251 hypothetical protein YP_005278509.1 KEGG: ssn:SSON_0985 third cytochrome oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II YP_005278510.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: sfv:SFV_0987 third cytochrome oxidase, subunit I YP_005278511.1 PFAM: HupH hydrogenase expression protein; KEGG: ebd:ECBD_2618 HupH hydrogenase expression protein YP_005278512.1 PFAM: hydrogenase-1 expression HyaE; KEGG: ebd:ECBD_2619 hydrogenase-1 operon protein HyaE YP_005278513.1 KEGG: sdy:SDY_0950 hydrogenase 1 maturation protease; TIGRFAM: hydrogenase expression/formation protein; hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein YP_005278514.1 TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; KEGG: sdy:SDY_0949 hydrogenase 1 b-type cytochrome subunit YP_005278515.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: sbo:SBO_2258 hydrogenase 1 large subunit YP_005278516.1 TIGRFAM: hydrogenase (NiFe) small subunit HydA; KEGG: eoh:ECO103_1017 hydrogenase 1, small subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit YP_005278517.1 PFAM: protein of unknown function UPF0005; KEGG: sdy:SDY_0945 hypothetical protein YP_005278518.1 KEGG: sbc:SbBS512_E2347 sulfur transfer protein TusE; TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family; PFAM: DsrC family protein YP_005278519.1 PFAM: acylphosphatase; KEGG: sdy:SDY_0943 hypothetical protein YP_005278520.1 manually curated; PFAM: Conserved hypothetical protein CHP00095; KEGG: ebw:BWG_0819 putative methyltransferase; SMART: PUA domain containing protein YP_005278521.1 KEGG: sbc:SbBS512_E2349 heat shock protein HspQ; TIGRFAM: hemimethylated DNA binding protein; PFAM: Hemimethylated DNA-binding region YP_005278522.1 PFAM: CoA-binding domain protein; KEGG: sbc:SbBS512_E2350 putative CoA-binding protein YP_005278523.1 PFAM: Protein of unknown function DUF2057; KEGG: sdy:SDY_0939 hypothetical protein YP_005278524.1 TIGRFAM: methylglyoxal synthase; KEGG: sdy:SDY_0938 methylglyoxal synthase; PFAM: MGS domain protein YP_005278525.1 PFAM: UvrD/REP helicase; KEGG: ebd:ECBD_2632 DNA helicase IV YP_005278526.1 PFAM: protein of unknown function DUF307; KEGG: sbc:SbBS512_E2354 hypothetical protein YP_005278527.1 TIGRFAM: hypothetical protein; integral membrane protein, YccS/YhfK family; KEGG: ssn:SSON_0964 hypothetical protein YP_005278528.1 PFAM: TfoX domain-containing protein; KEGG: sdy:SDY_0934 hypothetical protein YP_005278529.1 KEGG: sbc:SbBS512_E2358 SOS cell division inhibitor; TIGRFAM: cell division inhibitor SulA; PFAM: cell division inhibitor SulA YP_005278530.1 KEGG: sbc:SbBS512_E2359 outer membrane protein A; manually curated; PFAM: OmpA/MotB domain protein YP_005278531.1 PFAM: protein of unknown function DUF1047; KEGG: sdy:SDY_0929 hypothetical protein YP_005278532.1 KEGG: ssn:SSON_0959 putative ATP-dependent protease YP_005278533.1 TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA; KEGG: sdy:SDY_0927 3-hydroxydecanoyl-(acyl carrier protein) dehydratase; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_005278534.1 PFAM: ribosome modulation factor; KEGG: sdy:SDY_0926 ribosome modulation factor YP_005278535.1 PFAM: protein of unknown function DUF330; KEGG: eoi:ECO111_1020 hypothetical protein YP_005278536.1 PFAM: Mammalian cell entry related domain protein; KEGG: ebd:ECBD_2644 paraquat-inducible protein B YP_005278537.1 KEGG: sbo:SBO_2281 paraquat-inducible protein A; TIGRFAM: integral membrane protein, PqiA family; PFAM: Paraquat-inducible protein A YP_005278538.1 KEGG: ssn:SSON_0953 ABC transporter ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase YP_005278539.1 KEGG: eoh:ECO103_0994 23S rRNA m(2)G2445 methyltransferase; PFAM: RNA methylase; THUMP domain-containing protein; Conserved hypothetical protein CHP00095 YP_005278540.1 PFAM: MOSC domain containing protein; MOSC domain protein beta barrel domain protein; ferredoxin; KEGG: eoh:ECO103_0993 putative 2Fe-2S cluster-containing protein YP_005278541.1 PFAM: protein of unknown function DUF1379; KEGG: sbc:SbBS512_E2370 hypothetical protein YP_005278542.1 TIGRFAM: dihydroorotate dehydrogenase; KEGG: sbc:SbBS512_E2372 dihydroorotate dehydrogenase 2; PFAM: dihydroorotate oxidase YP_005278543.1 PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: ssn:SSON_0948 putativi pili assembly chaperone YP_005278544.1 PFAM: Fimbrial protein domain-containing protein; KEGG: eok:G2583_1178 putative fimbrial-like protein YP_005278545.1 PFAM: Fimbrial protein domain-containing protein; KEGG: sbc:SbBS512_E2375 fimbrial protein YP_005278546.1 PFAM: Fimbrial protein domain-containing protein; KEGG: sbc:SbBS512_E2376 putative fimbrial protein YP_005278547.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: eoi:ECO111_1008 putative outer membrane usher protein YP_005278548.1 PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: ssn:SSON_0943 putative chaperone YP_005278549.1 PFAM: Fimbrial protein domain-containing protein; KEGG: sbc:SbBS512_E2380 fimbrial protein YP_005278550.1 TIGRFAM: FMN reductase; KEGG: sbc:SbBS512_E2381 NAD(P)H-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase YP_005278551.1 KEGG: ebd:ECBD_2659 alkanesulfonate transporter substrate-binding subunit; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; SMART: extracellular solute-binding protein family 3 YP_005278552.1 KEGG: eoh:ECO103_0980 alkanesulfonate monooxygenase; TIGRFAM: alkanesulfonate monooxygenase, FMNH(2)-dependent; PFAM: Luciferase-like, subgroup YP_005278553.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ssn:SSON_0937 alkanesulfonate transporter permease subunit YP_005278554.1 KEGG: ssn:SSON_0936 aliphatic sulfonates transport ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_005278555.1 KEGG: eoh:ECO103_0977 aminopeptidase N; TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase YP_005278556.1 KEGG: sbo:SBO_2222 nicotinate phosphoribosyltransferase; TIGRFAM: nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like YP_005278557.1 TIGRFAM: asparaginyl-tRNA synthetase; KEGG: sbc:SbBS512_E2388 asparaginyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type YP_005278558.1 PFAM: porin Gram-negative type; KEGG: sbc:SbBS512_E2389 outer membrane protein F YP_005278559.1 KEGG: sdy:SDY_2329 aromatic amino acid aminotransferase; PFAM: aminotransferase class I and II YP_005278560.1 KEGG: sbo:SBO_2218 hypothetical protein YP_005278561.1 PFAM: protein of unknown function DUF882; KEGG: sdy:SDY_2331 hypothetical protein YP_005278562.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding domain 1 protein; KEGG: sbo:SBO_2216 hypothetical protein YP_005278563.1 PFAM: chromosome segregation and condensation protein MukB domain protein; KEGG: ebw:BWG_0776 cell division protein MukB YP_005278564.1 PFAM: chromosome segregation and condensation protein MukE; KEGG: sbc:SbBS512_E2401 condesin subunit E YP_005278565.1 PFAM: chromosome segregation and condensation protein MukF; KEGG: sdy:SDY_2336 condesin subunit F YP_005278566.1 PFAM: Methyltransferase type 11; KEGG: sdy:SDY_2337 putative metallothionein SmtA YP_005278567.1 PFAM: protein of unknown function DUF218; KEGG: sfv:SFV_0921 hypothetical protein YP_005278568.1 KEGG: sbc:SbBS512_E2404 hypothetical protein YP_005278569.1 TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: ebd:ECBD_2677 3-deoxy-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase YP_005278570.1 PFAM: protein of unknown function DUF343; KEGG: sdy:SDY_2341 hypothetical protein YP_005278571.1 PFAM: protein of unknown function DUF1006; KEGG: eoi:ECO111_0984 hypothetical protein YP_005278572.1 TIGRFAM: tetraacyldisaccharide 4'-kinase; KEGG: ssn:SSON_0917 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide-1-P 4'-kinase YP_005278573.1 TIGRFAM: lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; PFAM: ABC transporter transmembrane region; ABC transporter related; KEGG: sdy:SDY_2344 lipid transporter ATP-binding/permease protein; SMART: AAA ATPase YP_005278574.1 KEGG: eoj:ECO26_1039 hypothetical protein; TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein YP_005278575.1 TIGRFAM: integration host factor, beta subunit; PFAM: histone family protein DNA-binding protein; KEGG: sdy:SDY_2346 integration host factor subunit beta; SMART: histone family protein DNA-binding protein YP_005278576.1 KEGG: sbc:SbBS512_E2417 30S ribosomal protein S1; TIGRFAM: ribosomal protein S1; PFAM: RNA binding S1 domain protein YP_005278577.1 TIGRFAM: cytidylate kinase; KEGG: sbc:SbBS512_E2418 cytidylate kinase; PFAM: cytidylate kinase region YP_005278578.1 PFAM: peptidase M48 Ste24p; KEGG: ssn:SSON_0911 putative heat shock protein YP_005278579.1 KEGG: sbc:SbBS512_E2420 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YP_005278580.1 TIGRFAM: phosphoserine aminotransferase; KEGG: ssn:SSON_0908 phosphoserine aminotransferase; PFAM: aminotransferase class V YP_005278581.1 PFAM: protein of unknown function DUF421; KEGG: sbc:SbBS512_E2422 hypothetical protein YP_005278582.1 PFAM: protein of unknown function DUF181; KEGG: eoh:ECO103_0948 hypothetical protein YP_005278583.1 PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; KEGG: zmo:ZMO1360 thiamine pyrophosphate protein TPP binding domain-containing protein YP_005278584.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: zmn:Za10_1617 iron-containing alcohol dehydrogenase YP_005278585.1 KEGG: abn:AB57_0280 chloramphenicol acetyltransferase; PFAM: chloramphenicol acetyltransferase YP_005278586.1 manually curated; TIGRFAM: formate/nitrite transporter; KEGG: sfv:SFV_0904 formate transporter; PFAM: formate/nitrite transporter YP_005278587.1 TIGRFAM: formate acetyltransferase; KEGG: sdy:SDY_2358 formate acetyltransferase 1; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical YP_005278588.1 TIGRFAM: pyruvate formate-lyase activating enzyme; KEGG: sdy:SDY_2359 pyruvate formate lyase-activating enzyme 1; PFAM: Radical SAM domain protein YP_005278589.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: eoh:ECO103_0944 hypothetical protein YP_005278590.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eoi:ECO111_0968 putative transcriptional regulator LysR-type YP_005278591.1 PFAM: amino acid permease-associated region; KEGG: ebd:ECBD_2696 amino acid permease-associated region YP_005278592.1 PFAM: major facilitator superfamily MFS_1; KEGG: sdy:SDY_2363 putative MFS family transporter protein YP_005278593.1 PFAM: isochorismatase hydrolase; KEGG: ssn:SSON_0898 hypothetical protein YP_005278594.1 PFAM: DMSO reductase anchor subunit (DmsC); KEGG: eoi:ECO111_0964 dimethyl sulfoxide reductase, anaerobic, subunit C YP_005278595.1 TIGRFAM: dimethylsulfoxide reductase, chain B; KEGG: sbc:SbBS512_E2433 dimethylsulfoxide reductase, B subunit YP_005278596.1 KEGG: eoi:ECO111_0962 dimethyl sulfoxide reductase, anaerobic, subunit A; TIGRFAM: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region YP_005278597.1 KEGG: sbo:SBO_0826 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like YP_005278598.1 KEGG: ssn:SSON_0893 recombination factor protein RarA; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase YP_005278599.1 KEGG: sdy:SDY_2370 outer-membrane lipoprotein carrier protein; TIGRFAM: outer membrane lipoprotein carrier protein LolA; PFAM: outer membrane lipoprotein carrier protein LolA YP_005278600.1 PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: eoh:ECO103_0933 DNA translocase FtsK YP_005278601.1 KEGG: ent:Ent638_1413 leucine-responsive transcriptional regulator; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type YP_005278602.1 KEGG: sdy:SDY_2373 thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_005278603.1 TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; ABC transporter transmembrane region; KEGG: eoh:ECO103_0930 cysteine/glutathione ABC transporter membrane/ATP-binding component; SMART: AAA ATPase YP_005278604.1 TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; KEGG: eoh:ECO103_0929 cysteine/glutathione ABC transporter membrane/ATP-binding component; SMART: AAA ATPase YP_005278605.1 TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase; KEGG: sbc:SbBS512_E2444 leucyl/phenylalanyl-tRNA--protein transferase; PFAM: leucyl/phenylalanyl-tRNA--protein transferase YP_005278606.1 KEGG: cro:ROD_09485 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein YP_005278607.1 TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit clpA; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: ssn:SSON_0883 ATP-dependent Clp protease ATP-binding subunit; SMART: AAA ATPase YP_005278608.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: sdy:SDY_2380 ATP-dependent Clp protease adaptor protein ClpS YP_005278609.1 TIGRFAM: cold shock domain protein CspD; PFAM: Cold-shock protein DNA-binding; KEGG: sdy:SDY_2381 stationary phase/starvation inducible regulatory protein CspD; SMART: Cold shock protein YP_005278610.1 KEGG: ebd:ECBD_2715 macrolide transporter ATP-binding/permease protein; PFAM: protein of unknown function DUF214; ABC transporter related; SMART: AAA ATPase YP_005278611.1 manually curated; TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: sbc:SbBS512_E2451 macrolide transporter subunit MacA; PFAM: secretion protein HlyD family protein YP_005278612.1 PFAM: protein of unknown function DUF535; KEGG: eoi:ECO111_0946 hypothetical protein YP_005278613.1 KEGG: sfx:S0876 hypothetical protein YP_005278614.1 KEGG: sfv:SFV_0863 aquaporin Z; TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein YP_005278615.1 PFAM: protein of unknown function DUF340 membrane; KEGG: sbo:SBO_0807 putative surface protein YP_005278616.1 KEGG: eoh:ECO103_0917 hydroxylamine reductase; TIGRFAM: hybrid cluster protein; PFAM: Prismane YP_005278617.1 PFAM: ferredoxin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: sbc:SbBS512_E2459 HCP oxidoreductase, NADH-dependent YP_005278618.1 PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein; KEGG: sbc:SbBS512_E2460 pyruvate dehydrogenase YP_005278619.1 KEGG: sfv:SFV_0858 L-threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase YP_005278620.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: sbc:SbBS512_E2462 NAD dependent epimerase/dehydratase family protein YP_005278621.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: ebd:ECBD_2726 NAD-dependent epimerase/dehydratase YP_005278622.1 KEGG: eoj:ECO26_0994 1,6-anhydro-N-acetylmuramic acid-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2 YP_005278623.1 PFAM: protein of unknown function DUF74; KEGG: sdy:SDY_2397 hypothetical protein YP_005278624.1 KEGG: ebd:ECBD_2729 putative lipoprotein YP_005278625.1 KEGG: sdy:SDY_2404 arginine transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_005278626.1 TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: sbc:SbBS512_E2468 arginine ABC transporter, periplasmic arginine-binding protein ArtI; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor YP_005278627.1 KEGG: sbo:SBO_0796 arginine transporter permease subunit ArtQ; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_005278628.1 KEGG: sbc:SbBS512_E2470 arginine transporter permease subunit ArtM; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_005278629.1 TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: sbo:SBO_0794 arginine 3rd transport system periplasmic binding protein; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor YP_005278630.1 KEGG: eoh:ECO103_0903 23S rRNA methyluridine methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumB; PFAM: (Uracil-5)-methyltransferase YP_005278631.1 PFAM: Protein of unknown function DUF2593; KEGG: sdy:SDY_0737 hypothetical protein YP_005278632.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbc:SbBS512_E2474 putrescine transporter subunit: membrane component of ABC superfamily YP_005278633.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sfx:S0852 putrescine transporter subunit: membrane component of ABC superfamily YP_005278634.1 SMART: AAA ATPase; manually curated; KEGG: eoh:ECO103_0899 putrescine transporter ATP-binding subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain-containing protein YP_005278635.1 PFAM: extracellular solute-binding protein family 1; KEGG: ebd:ECBD_2740 putrescine transporter subunit: periplasmic-binding component of ABC superfamily YP_005278636.1 PFAM: Sensory transduction regulator, putative; KEGG: sbc:SbBS512_E2479 tetratricopeptide repeat protein YP_005278637.1 KEGG: sdy:SDY_0743 ribosomal protein S6 modification protein; TIGRFAM: alpha-L-glutamate ligase, RimK family; PFAM: RimK domain protein ATP-grasp YP_005278638.1 PFAM: nitroreductase; KEGG: sbc:SbBS512_E2481 nitroreductase A YP_005278639.1 PFAM: protein of unknown function DUF1418; KEGG: sbc:SbBS512_E2482 hypothetical protein YP_005278640.1 KEGG: sbo:SBO_0783 glutaredoxin 1; TIGRFAM: glutaredoxin, GrxA family; PFAM: glutaredoxin YP_005278641.1 KEGG: sdy:SDY_0747 hypothetical protein YP_005278642.1 manually curated; TIGRFAM: YidE/YbjL duplication; KEGG: sbc:SbBS512_E2485 hypothetical protein; PFAM: YidE/YbjL duplication domain-containing protein; TrkA-C domain protein YP_005278643.1 PFAM: transcriptional activator Ogr/delta; KEGG: sbc:SbBS512_E2486 phage transcriptional activator, Ogr/delta YP_005278644.1 KEGG: stt:t3444 putative regulator of late gene expression YP_005278645.1 PFAM: P2 GpU family protein; KEGG: sbc:SbBS512_E2488 phage protein gpU YP_005278646.1 KEGG: stt:t2662 putative bacteriophage tail protein; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region YP_005278647.1 PFAM: tail E family protein; KEGG: stt:t3440 putative phage tail protein YP_005278648.1 KEGG: sbc:SbBS512_E2492 phage major tail tube protein FII; TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein YP_005278649.1 KEGG: sbc:SbBS512_E2493 major tail sheath protein YP_005278650.1 PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: sbo:SBO_0773 inversion of adjacent DNA; at locus of E14 element YP_005278651.1 PFAM: Tail Collar domain protein; KEGG: ebd:ECBD_2751 tail collar domain protein YP_005278652.1 PFAM: tail assembly chaperone gp38; KEGG: eoh:ECO103_3089 putative tail fiber assembly YP_005278653.1 KEGG: sus:Acid_5342 hypothetical protein YP_005278654.1 KEGG: stt:t3433 variable tail fiber protein YP_005278655.1 TIGRFAM: phage tail protein I; KEGG: ebd:ECBD_2755 phage tail protein I YP_005278656.1 PFAM: Baseplate J family protein; KEGG: stt:t3431 phage baseplate assembly protein YP_005278657.1 PFAM: GPW/gp25 family protein; KEGG: stt:t3430 phage baseplate assembly protein YP_005278658.1 TIGRFAM: phage baseplate assembly protein V; KEGG: ebd:ECBD_2758 phage baseplate assembly protein V YP_005278659.1 KEGG: cps:CPS_1939 sensory box sensor histidine kinase/response regulator YP_005278660.1 TIGRFAM: phage virion morphogenesis protein; KEGG: stt:t3428 putative phage tail protein YP_005278661.1 KEGG: sed:SeD_A3040 phage tail completion protein R YP_005278662.1 manually curated; KEGG: ebr:ECB_00837 Fels-2 prophage protein YP_005278663.1 TIGRFAM: phage lysis regulatory protein, LysB family; KEGG: sbo:SBO_0767 putative regulatory protein YP_005278664.1 KEGG: stt:t3425 hypothetical protein YP_005278665.1 PFAM: glycoside hydrolase family 24; KEGG: sed:SeD_A3043 phage lysozyme YP_005278666.1 KEGG: sbo:SBO_0764 secretory protein YP_005278667.1 PFAM: tail X family protein; KEGG: sbo:SBO_0763 phage tail protein YP_005278668.1 PFAM: head completion protein; KEGG: sea:SeAg_B2864 phage head completion protein YP_005278669.1 PFAM: small terminase subunit; KEGG: sed:SeD_A3047 terminase, endonuclease subunit YP_005278670.1 KEGG: sed:SeD_A3048 phage major capsid protein, P2 family; TIGRFAM: phage major capsid protein, P2 family; PFAM: major capsid protein P2 YP_005278671.1 PFAM: capsid scaffolding; KEGG: sbo:SBO_0759 putative capsid scaffolding protein YP_005278672.1 KEGG: stt:t3417 terminase ATPase subunit YP_005278673.1 KEGG: ebd:ECBD_2765 phage portal protein, PBSX family; TIGRFAM: phage portal protein, PBSX family; PFAM: portal protein YP_005278674.1 PFAM: protein of unknown function DUF262; KEGG: rlt:Rleg2_2200 protein of unknown function DUF262 YP_005278675.1 KEGG: ebd:ECBD_2768 hypothetical protein YP_005278676.1 PFAM: DinI family protein; KEGG: sbo:SBO_0753 putative damage-inducible protein YP_005278677.1 KEGG: ebd:ECBD_2770 hypothetical protein YP_005278678.1 PFAM: replication gene A; KEGG: ebr:ECB_00825 putative replication protein for prophage YP_005278679.1 KEGG: sed:SeD_A3058 retron adenine methylase; TIGRFAM: DNA adenine methylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase YP_005278680.1 TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; KEGG: stt:t3408 hypothetical protein YP_005278681.1 KEGG: ebr:ECB_00822 hypothetical protein YP_005278682.1 KEGG: stt:t3406 hypothetical protein YP_005278683.1 KEGG: pop:POPTR_873790 hypothetical protein YP_005278684.1 KEGG: ebr:ECB_00820 hypothetical protein YP_005278685.1 KEGG: eta:ETA_05560 phage regulatory protein YP_005278686.1 KEGG: ent:Ent638_1343 putative regulator for prophage YP_005278687.1 KEGG: ypy:YPK_0883 CI repressor; manually curated; PFAM: CI repressor YP_005278688.1 PFAM: KAP P-loop domain protein; KEGG: sdn:Sden_3526 KAP P-loop YP_005278689.1 PFAM: integrase family protein; KEGG: stt:t3400 bacteriophage integrase YP_005278690.1 PFAM: regulatory protein TetR; KEGG: sbc:SbBS512_E2499 transcriptional regulator, TetR family YP_005278691.1 KEGG: sbo:SBO_0741 putative DeoR-type transcriptional regulator; manually curated; PFAM: major facilitator superfamily MFS_1 YP_005278692.1 KEGG: eoh:ECO103_0888 hypothetical protein; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_005278693.1 KEGG: sfv:SFV_0828 hypothetical protein YP_005278694.1 PFAM: major facilitator superfamily MFS_1; KEGG: eoh:ECO103_0886 multidrug efflux system protein Cmr YP_005278695.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: sdy:SDY_0843 undecaprenyl pyrophosphate phosphatase; SMART: phosphoesterase PA-phosphatase related YP_005278696.1 KEGG: eoh:ECO103_0884 DNA-binding transcriptional repressor DeoR; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_005278697.1 KEGG: eok:G2583_1069 penicillin-binding protein 6; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein YP_005278698.1 PFAM: Glutathione S-transferase domain; KEGG: sfx:S0831 putative transferase YP_005278699.1 KEGG: sbo:SBO_0733 putative dehydrogenase YP_005278700.1 KEGG: sbc:SbBS512_E2509 biofilm formation regulatory protein BssR YP_005278701.1 TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: protein of unknown function UPF0004 ; Radical SAM domain protein; KEGG: sbo:SBO_0727 hypothetical protein; SMART: Elongator protein 3/MiaB/NifB YP_005278702.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: eok:G2583_1062 hypothetical protein; SMART: GGDEF domain containing protein YP_005278703.1 KEGG: eoh:ECO103_0877 hypothetical protein; PFAM: EAL domain protein; SMART: EAL domain protein YP_005278704.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbc:SbBS512_E2516 glutathione ABC transporter, permease protein GsiD YP_005278705.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sdy:SDY_0756 putative transport system permease protein YP_005278706.1 PFAM: extracellular solute-binding protein family 5; KEGG: eoi:ECO111_0898 putative peptide transporter subunit YP_005278707.1 KEGG: eoh:ECO103_0873 glutathione transporter ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_005278708.1 KEGG: ebd:ECBD_2795 L-asparaginase; PFAM: peptidase T2 asparaginase 2 YP_005278709.1 KEGG: eoj:ECO26_0954 molybdopterin biosynthesis protein MoeA; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; molybdopterin binding domain; MoeA domain protein domain IV YP_005278710.1 KEGG: sfx:S0819 molybdopterin biosynthesis protein MoeB; TIGRFAM: molybdopterin synthase sulfurylase MoeB; PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein YP_005278711.1 TIGRFAM: transaldolase; KEGG: eoh:ECO103_0869 fructose-6-phosphate aldolase; PFAM: Transaldolase YP_005278712.1 TIGRFAM: glycyl-radical enzyme activating protein family; KEGG: ssn:SSON_0806 putative pyruvate formate-lyase 2 activating enzyme; PFAM: Radical SAM domain protein YP_005278713.1 TIGRFAM: pyruvate formate-lyase; KEGG: eoh:ECO103_0867 putative pyruvate formate lyase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical YP_005278714.1 KEGG: eoi:ECO111_0890 putative hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_005278715.1 PFAM: protein of unknown function DUF1479; KEGG: ebd:ECBD_2802 protein of unknown function DUF1479 YP_005278716.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: eoh:ECO103_4940 putative IS621 transposase YP_005278717.1 KEGG: efe:EFER_0963 putative transporter fused subunits of ABC superfamily: ATP-binding components; PFAM: ABC transporter related; SMART: AAA ATPase YP_005278718.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: sdy:SDY_0777 hypothetical protein YP_005278719.1 PFAM: Citrate transporter; KEGG: ssn:SSON_0797 hypothetical protein YP_005278720.1 KEGG: sbc:SbBS512_E2531 manganese transport regulator MntR; PFAM: iron dependent repressor; SMART: iron dependent repressor YP_005278721.1 KEGG: ebd:ECBD_2807 hypothetical protein YP_005278722.1 PFAM: sulfatase; KEGG: eoh:ECO103_0851 putative hydrolase, inner membrane YP_005278723.1 PFAM: virulence-related outer membrane protein; KEGG: sdy:SDY_0781 outer membrane protein X YP_005278724.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: eoh:ECO103_0849 threonine and homoserine efflux system YP_005278725.1 PFAM: Ferritin Dps family protein; KEGG: sdy:SDY_0783 DNA starvation/stationary phase protection protein Dps YP_005278726.1 TIGRFAM: cationic amino acid ABC transporter, periplasmic binding protein; PFAM: extracellular solute-binding protein family 3; KEGG: sbo:SBO_0702 glutamine ABC transporter periplasmic protein; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor YP_005278727.1 KEGG: sdy:SDY_0786 glutamine ABC transporter permease protein; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_005278728.1 KEGG: ssn:SSON_0789 glutamine ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_005278729.1 PFAM: MscS Mechanosensitive ion channel; KEGG: eoi:ECO111_0869 hypothetical protein YP_005278730.1 KEGG: sbc:SbBS512_E2543 putative SAM-dependent methyltransferase; PFAM: protein of unknown function DUF890 YP_005278731.1 KEGG: sbc:SbBS512_E2544 hypothetical protein; manually curated; PFAM: protein of unknown function DUF1471 YP_005278732.1 KEGG: eoh:ECO103_0841 catecholate siderophore receptor Fiu; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_005278733.1 KEGG: ebd:ECBD_2819 putative hydroxylase; PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit YP_005278734.1 KEGG: ssn:SSON_0782 hypothetical protein YP_005278735.1 PFAM: protein of unknown function DUF1471; KEGG: sfv:SFV_0785 hypothetical protein YP_005278736.1 PFAM: Malate/L-lactate dehydrogenase; KEGG: ssn:SSON_0780 hypothetical protein YP_005278737.1 PFAM: Glycosyl transferase, family 3-like; KEGG: eoh:ECO103_0836 glycosyl transferase family protein YP_005278738.1 SMART: helicase c2; DEAD-like helicase ; Helicase-like, DEXD box c2 type; KEGG: sfv:SFV_0781 ATP-dependent DNA helicase DinG YP_005278739.1 PFAM: Conserved hypothetical protein CHP02464; KEGG: efe:EFER_2310 hypothetical protein YP_005278740.1 KEGG: ebd:ECBD_2826 ATP-dependent RNA helicase RhlE; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_005278741.1 PFAM: Transcriptional regulator TetR ; regulatory protein TetR; KEGG: sdy:SDY_0807 putative DNA-binding transcriptional regulator YP_005278742.1 PFAM: secretion protein HlyD family protein; KEGG: eoh:ECO103_0831 hypothetical protein YP_005278743.1 KEGG: eoi:ECO111_0855 fused putative transporter subunits of ABC superfamily: ATP-binding components; PFAM: ABC transporter related; SMART: AAA ATPase YP_005278744.1 PFAM: ABC-2 type transporter; KEGG: ssn:SSON_0772 hypothetical protein YP_005278745.1 PFAM: ABC-2 type transporter; KEGG: sbc:SbBS512_E2561 ABC-2 type transporter, permease protein YP_005278746.1 KEGG: sbc:SbBS512_E2560 hypothetical protein YP_005278747.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ssn:SSON_0769 hypothetical protein YP_005278748.1 KEGG: eok:G2583_1017 putative cardiolipin synthetase YbhO; PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase YP_005278749.1 KEGG: eoh:ECO103_0824 hypothetical protein YP_005278750.1 PFAM: protein of unknown function UPF0005; KEGG: eoi:ECO111_0848 hypothetical protein YP_005278751.1 KEGG: sbc:SbBS512_E2566 hypothetical protein; manually curated; PFAM: protein of unknown function UPF0005 YP_005278752.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: ssn:SSON_0764 molybdopterin guanine dinucleotide biosynthesis protein MoaE YP_005278753.1 KEGG: sbc:SbBS512_E2568 molybdopterin synthase small subunit; TIGRFAM: molybdopterin converting factor, subunit 1; PFAM: thiamineS protein YP_005278754.1 KEGG: sdy:SDY_0823 molybdenum cofactor biosynthesis protein C; TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis protein MoaC YP_005278755.1 KEGG: sbc:SbBS512_E2570 molybdenum cofactor biosynthesis protein B; TIGRFAM: molybdenum cofactor biosynthesis protein B; molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain YP_005278756.1 TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: molybdenum cofactor synthesis domain protein; Radical SAM domain protein; KEGG: sbo:SBO_0668 molybdenum cofactor biosynthesis protein A; SMART: Elongator protein 3/MiaB/NifB YP_005278757.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: sbc:SbBS512_E2572 hypothetical protein YP_005278758.1 TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; type III restriction protein res subunit; UvrB/UvrC protein; KEGG: sbc:SbBS512_E2573 excinuclease ABC subunit B; SMART: DEAD-like helicase ; helicase domain protein YP_005278759.1 TIGRFAM: dethiobiotin synthase; KEGG: ssn:SSON_0757 dithiobiotin synthetase YP_005278760.1 KEGG: eoh:ECO103_0812 biotin biosynthesis protein BioC; TIGRFAM: biotin biosynthesis protein BioC; PFAM: Methyltransferase type 11 YP_005278761.1 TIGRFAM: 8-amino-7-oxononanoate synthase; KEGG: eoh:ECO103_0811 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II YP_005278762.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: biotin synthase; KEGG: ssn:SSON_0754 biotin synthesis; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein YP_005278763.1 KEGG: eok:G2583_1002 adenosylmethionine-8-amino-7-oxononanoate transaminase; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PFAM: aminotransferase class-III YP_005278764.1 PFAM: PEBP family protein; KEGG: ssn:SSON_0752 putative kinase inhibitor protein YP_005278765.1 PFAM: Pectinesterase; KEGG: sbc:SbBS512_E2580 putative pectinesterase YP_005278766.1 PFAM: aconitate hydratase domain-containing protein; KEGG: eoh:ECO103_0759 hypothetical protein YP_005278767.1 KEGG: eoh:ECO103_0758 putative transporter; TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter YP_005278768.1 PFAM: protein of unknown function DUF453; KEGG: sfv:SFV_0752 hypothetical protein YP_005278769.1 KEGG: ssn:SSON_0742 putative transcriptional regulator LysR-type; manually curated; PFAM: LysR substrate-binding; regulatory protein LysR YP_005278770.1 KEGG: sdy:SDY_2011 6-phosphogluconolactonase YP_005278771.1 KEGG: eok:G2583_0932 phosphatase YbhA; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_005278772.1 TIGRFAM: molybdate ABC transporter, ATPase subunit; PFAM: ABC transporter related; TOBE domain-containing protein; KEGG: sbc:SbBS512_E0686 molybdate transporter ATP-binding protein; SMART: AAA ATPase YP_005278773.1 KEGG: sdy:SDY_0711 molybdate ABC transporter permease protein; TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_005278774.1 KEGG: sdy:SDY_0710 molybdate transporter periplasmic protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_005278775.1 KEGG: sfv:SFV_0579 DNA-binding transcriptional regulator ModE; TIGRFAM: molybdate transport repressor, ModE; PFAM: TOBE domain-containing protein; regulatory protein LysR YP_005278776.1 KEGG: eoh:ECO103_0748 putative molybdenum transport ATP-binding protein ModF; PFAM: ABC transporter related; SMART: AAA ATPase YP_005278777.1 KEGG: ssn:SSON_0711 UDP-galactose-4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_005278778.1 TIGRFAM: galactose-1-phosphate uridylyltransferase; KEGG: eoi:ECO111_0768 galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein YP_005278779.1 KEGG: ebr:ECB_00710 galactokinase; TIGRFAM: galactokinase; PFAM: Galactokinase galactose-binding domain; GHMP kinase; GHMP kinase domain protein YP_005278780.1 TIGRFAM: galactose mutarotase; KEGG: sbc:SbBS512_E0677 aldose 1-epimerase; PFAM: Aldose 1-epimerase YP_005278781.1 TIGRFAM: phosphoglycerate mutase 1 family; KEGG: sbc:SbBS512_E0676 phosphoglyceromutase; PFAM: Phosphoglycerate mutase YP_005278782.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: sdy:SDY_0701 phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA YP_005278783.1 KEGG: sfv:SFV_0587 putative homeobox protein YP_005278784.1 KEGG: sdy:SDY_0696 zinc transporter ZitB; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_005278785.1 KEGG: ssn:SSON_0703 required for NMN transport; TIGRFAM: nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC YP_005278786.1 TIGRFAM: quinolinate synthetase complex, A subunit; KEGG: eoh:ECO103_0738 quinolinate synthetase; PFAM: Quinolinate synthetase A YP_005278787.1 TIGRFAM: tol-pal system protein YbgF; KEGG: sbc:SbBS512_E0664 tol-pal system protein YbgF YP_005278788.1 KEGG: sbc:SbBS512_E0663 peptidoglycan-associated outer membrane lipoprotein; TIGRFAM: peptidoglycan-associated lipoprotein; PFAM: OmpA/MotB domain protein YP_005278789.1 KEGG: ssn:SSON_0692 translocation protein TolB; TIGRFAM: Tol-Pal system beta propeller repeat protein TolB; PFAM: TolB domain-containing protein; WD40-like beta Propeller containing protein YP_005278790.1 KEGG: ebd:ECBD_2921 cell envelope integrity inner membrane protein TolA; TIGRFAM: protein TolA; PFAM: Tol-Pal system TolA YP_005278791.1 KEGG: eok:G2583_0905 hypothetical protein; TIGRFAM: protein TolR; PFAM: Biopolymer transport protein ExbD/TolR YP_005278792.1 KEGG: eok:G2583_0904 inner membrane protein; TIGRFAM: protein TolQ; PFAM: MotA/TolQ/ExbB proton channel YP_005278793.1 KEGG: sbo:SBO_0595 acyl-CoA thioester hydrolase YbgC; TIGRFAM: tol-pal system-associated acyl-CoA thioesterase; PFAM: thioesterase superfamily protein YP_005278794.1 KEGG: sdy:SDY_0683 hypothetical protein; TIGRFAM: cyd operon protein YbgE; PFAM: Cyd operon protein YbgE YP_005278795.1 KEGG: sdy:SDY_0682 putative outer membrane lipoprotein; TIGRFAM: cyd operon protein YbgT; PFAM: membrane bound YbgT family protein YP_005278796.1 KEGG: sbc:SbBS512_E0655 cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II YP_005278797.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: sbc:SbBS512_E0654 cytochrome d ubiquinol oxidase, subunit I YP_005278798.1 PFAM: glycoside hydrolase family 38; glycosyl hydrolase 38 domain protein; KEGG: eoh:ECO103_0726 alpha-mannosidase YP_005278799.1 KEGG: ebd:ECBD_2930 PTS system 2-O-A-mannosyl-D-glycerate specific transporter subunit IIABC; TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphotransferase system EIIC YP_005278800.1 KEGG: sbo:SBO_0588 DNA-binding transcriptional repressor MngR; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_005278801.1 TIGRFAM: succinyl-CoA synthetase, alpha subunit; KEGG: sbc:SbBS512_E0648 succinyl-CoA synthetase subunit alpha; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding domain protein YP_005278802.1 TIGRFAM: succinyl-CoA synthetase, beta subunit; KEGG: ssn:SSON_0679 succinyl-CoA synthetase subunit beta; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase YP_005278803.1 KEGG: eoh:ECO103_0720 dihydrolipoamide succinyltransferase; TIGRFAM: 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein YP_005278804.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; KEGG: sbc:SbBS512_E0645 2-oxoglutarate dehydrogenase E1 component; PFAM: Transketolase central region; dehydrogenase E1 component YP_005278805.1 KEGG: sbc:SbBS512_E0643 succinate dehydrogenase iron-sulfur subunit; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_005278806.1 KEGG: sbo:SBO_0581 succinate dehydrogenase flavoprotein subunit; TIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_005278807.1 TIGRFAM: succinate dehydrogenase, hydrophobic membrane anchor protein; KEGG: sdy:SDY_0660 succinate dehydrogenase cytochrome b556 small membrane subunit YP_005278808.1 KEGG: sbc:SbBS512_E0640 succinate dehydrogenase cytochrome b556 large membrane subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit YP_005278809.1 KEGG: sbc:SbBS512_E0638 type II citrate synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase YP_005278810.1 PFAM: Fimbrial protein domain-containing protein; KEGG: ssn:SSON_0670 putative fimbrial-like protein YP_005278811.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: eoi:ECO111_0735 putative outer membrane usher protein YP_005278812.1 PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: sbc:SbBS512_E0634 periplasmic pilus chaperone family protein YP_005278813.1 KEGG: ssn:SSON_0667 hypothetical protein YP_005278814.1 KEGG: ebw:BWG_0574 putative regulator; TIGRFAM: membrane protein AbrB duplication; PFAM: ammonia monooxygenase YP_005278815.1 PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; Formamidopyrimidine-DNA glycosylase catalytic domain protein; KEGG: eok:G2583_0869 endonuclease VIII (DNA glycosylase/AP lyase Nei) (DNA-(apurinic or apyrimidinic site) lyase Nei) YP_005278816.1 PFAM: LamB/YcsF family protein; KEGG: sbo:SBO_0572 LamB/YcsF family protein YP_005278817.1 SMART: Allophanate hydrolase subunit 2; TIGRFAM: urea amidolyase related protein; KEGG: sbc:SbBS512_E0629 allophanate hydrolase, subunit 2; PFAM: Allophanate hydrolase subunit 2 YP_005278818.1 KEGG: ebd:ECBD_2950 allophanate hydrolase subunit 1; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1 YP_005278819.1 PFAM: protein of unknown function DUF34; KEGG: sbc:SbBS512_E0627 putative hydrolase-oxidase YP_005278820.1 KEGG: sfx:S0601 putative transport protein; TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region YP_005278821.1 KEGG: ebd:ECBD_2953 deoxyribodipyrimidine photolyase; PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein YP_005278822.1 PFAM: protein of unknown function DUF1722; KEGG: ebd:ECBD_2954 hypothetical protein YP_005278823.1 KEGG: eoj:ECO26_0766 hypothetical protein YP_005278824.1 PFAM: RHS protein; YD repeat-containing protein; KEGG: ebr:ECB_00660 conserved hypothetical protein, rhs-like protein YP_005278825.1 KEGG: ebd:ECBD_2959 hypothetical protein YP_005278826.1 KEGG: eoj:ECO26_0763 RhsC core protein with extension; TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein YP_005278827.1 PFAM: Protein of unknown function DUF2517; KEGG: sdy:SDY_0635 hypothetical protein YP_005278828.1 manually curated; TIGRFAM: K+-transporting ATPase, F subunit; KEGG: sbc:SbBS512_E0550 K+-transporting ATPase, F subunit; PFAM: K+transporting ATPase F subunit YP_005278829.1 TIGRFAM: potassium-transporting ATPase, A subunit; KEGG: ebd:ECBD_2962 potassium-transporting ATPase subunit A; PFAM: K transporting ATPase A subunit YP_005278830.1 KEGG: eoh:ECO103_0691 potassium-transporting ATPase subunit B; TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase YP_005278831.1 TIGRFAM: potassium-transporting ATPase, C subunit; KEGG: ebd:ECBD_2964 potassium-transporting ATPase subunit C; PFAM: K transporting ATPase KdpC subunit YP_005278832.1 KEGG: eoh:ECO103_0689 sensor protein KdpD; PFAM: Osmosensitive K channel His kinase sensor; UspA domain-containing protein; histidine kinase A domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_005278833.1 KEGG: eoh:ECO103_0688 DNA-binding transcriptional activator KdpE; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_005278834.1 KEGG: etr:ETAE_0258 hypothetical protein YP_005278835.1 KEGG: eoh:ECO103_0687 ornithine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein YP_005278836.1 KEGG: ssn:SSON_0643 putrescine transporter; TIGRFAM: arginine/ornithine antiporter; PFAM: amino acid permease-associated region YP_005278837.1 KEGG: efe:EFER_2420 phosphoglucomutase; TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase YP_005278838.1 PFAM: SeqA family protein; KEGG: eoh:ECO103_0684 replication initiation regulator SeqA YP_005278839.1 PFAM: alpha/beta hydrolase fold; KEGG: sbo:SBO_0548 hypothetical protein YP_005278840.1 KEGG: sdy:SDY_0625 LexA regulated protein YP_005278841.1 KEGG: sdy:SDY_0624 flavodoxin FldA; TIGRFAM: flavodoxin; PFAM: flavodoxin/nitric oxide synthase YP_005278842.1 PFAM: ferric-uptake regulator; KEGG: sdy:SDY_0623 ferric uptake regulator YP_005278843.1 KEGG: eoh:ECO103_0678 putative lipoprotein YP_005278844.1 PFAM: outer membrane porin; KEGG: ebd:ECBD_2980 outer membrane porin YP_005278845.1 KEGG: ssn:SSON_0634 glutaminyl-tRNA synthetase; TIGRFAM: glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain YP_005278846.1 TIGRFAM: PTS system, N-acetylglucosamine-specific IIBC subunit; PTS system, maltose and glucose-specific subfamily, IIC subunit; PTS system, glucose-like IIB subunint; PTS system, glucose subfamily, IIA subunit; KEGG: eoi:ECO111_0698 PTS system N-acetyl glucosamine specific transporter subunits IIABC; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site; sugar-specific permease EIIA 1 domain YP_005278847.1 KEGG: sbc:SbBS512_E0573 glucosamine-6-phosphate deaminase; TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: glucosamine/galactosamine-6-phosphate isomerase YP_005278848.1 TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: eok:G2583_0838 N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase YP_005278849.1 PFAM: ROK family protein; regulatory protein MarR; KEGG: sdy:SDY_0610 transcriptional repressor of N-acetylglucosamine operon YP_005278850.1 KEGG: sdy:SDY_0609 UMP phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase YP_005278851.1 KEGG: sfv:SFV_0657 asparagine synthetase B; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase YP_005278852.1 KEGG: eoh:ECO103_0669 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; PFAM: FAD dependent oxidoreductase YP_005278853.1 TIGRFAM: tRNA-i(6)A37 thiotransferase enzyme MiaB; RNA modification enzyme, MiaB family; PFAM: protein of unknown function UPF0004 ; Radical SAM domain protein; deoxyribonuclease/rho motif-related TRAM; KEGG: sdy:SDY_0597 hypothetical protein; SMART: Elongator protein 3/MiaB/NifB YP_005278854.1 PFAM: PhoH family protein; KEGG: sdy:SDY_0596 putative ATP-binding protein in pho regulon YP_005278855.1 PFAM: protein of unknown function UPF0054; KEGG: sbo:SBO_0523 putative metalloprotease YP_005278856.1 PFAM: transporter-associated region; CBS domain containing protein; KEGG: sdy:SDY_0594 putative transport protein YP_005278857.1 KEGG: eoh:ECO103_0664 apolipoprotein N-acyltransferase; TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_005278858.1 KEGG: sdy:SDY_0592 glutamate and aspartate transporter subunit; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_005278859.1 KEGG: ssn:SSON_0608 glutamate/aspartate transport system permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_005278860.1 KEGG: sdy:SDY_0588 glutamate/aspartate transport system permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_005278861.1 KEGG: ssn:SSON_0606 ATP-binding protein of glutamate/aspartate transport system; PFAM: ABC transporter related; SMART: AAA ATPase YP_005278862.1 KEGG: ssn:SSON_0605 ribonucleoside hydrolase 1; PFAM: Inosine/uridine-preferring nucleoside hydrolase YP_005278863.1 PFAM: Heat shock protein 70; KEGG: sfv:SFV_0676 putative DnaK protein YP_005278864.1 PFAM: heat shock protein DnaJ domain protein; KEGG: eoh:ECO103_0656 Hsc56 co-chaperone of HscC YP_005278865.1 KEGG: eoh:ECO103_0655 putative tRNA ligase YP_005278866.1 KEGG: eoh:ECO103_0654 hypothetical protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein YP_005278867.1 KEGG: ssn:SSON_0600 putative enzyme of polynucleotide modification; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_005278868.1 KEGG: ebw:BWG_0516 hypothetical protein YP_005278869.1 KEGG: sbo:SBO_0508 hypothetical protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein YP_005278870.1 PFAM: protein of unknown function DUF1451; KEGG: sdy:SDY_0567 hypothetical protein YP_005278871.1 KEGG: efe:EFER_2464 leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase YP_005278872.1 PFAM: Rare lipoprotein B; KEGG: sbc:SbBS512_E0610 LPS-assembly lipoprotein RlpB YP_005278873.1 TIGRFAM: DNA polymerase III, delta subunit; KEGG: eok:G2583_0803 DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta YP_005278874.1 TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; KEGG: ssn:SSON_0593 nicotinic acid mononucleotide adenylyltransferase; PFAM: cytidylyltransferase YP_005278875.1 KEGG: eoh:ECO103_0645 putative alpha-ribazole-5'-P phosphatase; TIGRFAM: alpha-ribazole phosphatase; PFAM: Phosphoglycerate mutase YP_005278876.1 KEGG: sbc:SbBS512_E0614 hypothetical protein; TIGRFAM: iojap-like protein; PFAM: Iojap-related protein YP_005278877.1 PFAM: protein of unknown function DUF163; KEGG: sdy:SDY_0558 rRNA large subunit methyltransferase YP_005278878.1 TIGRFAM: penicillin-binding protein 2; KEGG: ebd:ECBD_3016 penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_005278879.1 KEGG: sbc:SbBS512_E0617 cell wall shape-determining protein; TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein YP_005278880.1 KEGG: eoi:ECO111_0663 rare lipoprotein A; TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation domain-containing protein YP_005278881.1 KEGG: sdy:SDY_0554 D-alanyl-D-alanine carboxypeptidase fraction A; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein YP_005278882.1 PFAM: protein of unknown function DUF493; KEGG: sdy:SDY_0553 hypothetical protein YP_005278883.1 TIGRFAM: lipoate-protein ligase B; KEGG: sdy:SDY_0552 lipoyltransferase; PFAM: biotin/lipoate A/B protein ligase YP_005278884.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: eoi:ECO111_0659 putative DNA-binding transcriptional regulator YP_005278885.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: lipoic acid synthetase; KEGG: sdy:SDY_0550 lipoyl synthase; PFAM: Radical SAM domain protein YP_005278886.1 KEGG: sdy:SDY_0549 twin arginine translocase protein E; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106 YP_005278887.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: ebd:ECBD_3025 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_005278888.1 KEGG: sdy:SDY_0547 hypothetical protein; TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein YP_005278889.1 KEGG: cko:CKO_02534 cold shock protein CspE; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein YP_005278890.1 PFAM: Antimicrobial peptide resistance and lipid A acylation PagP; KEGG: ebd:ECBD_3028 palmitoyl transferase YP_005278891.1 KEGG: sbo:SBO_0486 C4-dicarboxylate transporter DcuC; TIGRFAM: anaerobic c4-dicarboxylate antiporter, DcuC family; PFAM: C4-dicarboxylate anaerobic carrier-like YP_005278892.1 KEGG: sbc:SbBS512_E0535 two-component response regulator DpiA; PFAM: response regulator receiver; SMART: response regulator receiver YP_005278893.1 KEGG: eok:G2583_0783 sensor histidine kinase DpiB; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein YP_005278894.1 SMART: Citrate lyase ligase domain protein; TIGRFAM: citrate lyase ligase; cytidyltransferase-related domain protein; KEGG: eoi:ECO111_0649 citrate lyase synthetase; PFAM: Citrate lyase ligase domain protein; GCN5-related N-acetyltransferase YP_005278895.1 TIGRFAM: citrate lyase acyl carrier protein; KEGG: ssn:SSON_0569 citrate lyase subunit gamma YP_005278896.1 TIGRFAM: citrate lyase, beta subunit; KEGG: sbc:SbBS512_E0530 citrate (pro-3S)-lyase, beta subunit; PFAM: HpcH/HpaI aldolase YP_005278897.1 TIGRFAM: citrate lyase, alpha subunit; KEGG: ebd:ECBD_3037 citrate lyase, alpha subunit; PFAM: Citrate lyase alpha subunit YP_005278898.1 TIGRFAM: holo-ACP synthase CitX; KEGG: sbc:SbBS512_E0528 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA:apo-citrate lyase; PFAM: Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase YP_005278899.1 TIGRFAM: triphosphoribosyl-dephospho-CoA synthase CitG; KEGG: ebd:ECBD_3039 triphosphoribosyl-dephospho-CoA synthase; PFAM: triphosphoribosyl-dephospho-CoA protein YP_005278900.1 KEGG: ebd:ECBD_3040 anion transporter; TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter YP_005278901.1 KEGG: eok:G2583_0775 ribonuclease I; PFAM: ribonuclease T2 YP_005278902.1 KEGG: sbc:SbBS512_E0524 nucleoside diphosphate kinase regulator YP_005278903.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: eok:G2583_0772 oxidoreductase, zinc-binding dehydrogenase family YP_005278904.1 PFAM: UspA domain-containing protein; KEGG: sdy:SDY_0542 hypothetical protein YP_005278905.1 KEGG: sbc:SbBS512_E0520 alkyl hydroperoxide reductase subunit F; TIGRFAM: alkyl hydroperoxide reductase, F subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_005278906.1 KEGG: sbc:SbBS512_E0519 alkyl hydroperoxide reductase subunit C; TIGRFAM: peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like YP_005278907.1 manually curated; KEGG: ebw:BWG_0478 disulfide isomerase/thiol-disulfide oxidase YP_005278908.1 PFAM: regulatory protein LysR; KEGG: ebw:BWG_0477 putative DNA-binding transcriptional regulator YP_005278909.1 PFAM: PP-loop domain protein; KEGG: eok:G2583_0766 phosphoadenosine phosphosulfate reductase family protein YP_005278910.1 KEGG: ssn:SSON_0553 hypothetical protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease YP_005278911.1 PFAM: aminotransferase class I and II; KEGG: sfv:SFV_0549 putative aminotransferase YP_005278912.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: eoh:ECO103_0608 hypothetical protein YP_005278913.1 PFAM: protein of unknown function DUF466; KEGG: sdy:SDY_0530 hypothetical protein YP_005278914.1 PFAM: carbon starvation protein CstA; KEGG: efe:EFER_2496 carbon starvation protein YP_005278915.1 PFAM: thioesterase superfamily protein; KEGG: sdy:SDY_0528 hypothetical protein YP_005278916.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ebw:BWG_0469 2,3-dihydroxybenzoate-2,3-dehydrogenase YP_005278917.1 KEGG: sfl:SF0509 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatase; PFAM: isochorismatase hydrolase; phosphopantetheine-binding YP_005278918.1 KEGG: eoi:ECO111_0624 enterobactin synthase subunit E; TIGRFAM: 2,3-dihydroxybenzoate-AMP ligase; PFAM: AMP-dependent synthetase and ligase YP_005278919.1 KEGG: eoh:ECO103_0601 isochorismate synthase 1; TIGRFAM: isochorismate synthase; PFAM: Chorismate binding-like YP_005278920.1 PFAM: periplasmic binding protein; KEGG: ebd:ECBD_3063 iron-enterobactin transporter periplasmic binding protein YP_005278921.1 PFAM: major facilitator superfamily MFS_1; KEGG: ssn:SSON_0542 enterobactin exporter EntS YP_005278922.1 PFAM: transport system permease protein; KEGG: ebd:ECBD_3065 iron-enterobactin transporter membrane protein YP_005278923.1 PFAM: transport system permease protein; KEGG: sfv:SFV_0537 iron-enterobactin transporter permease YP_005278924.1 KEGG: sdy:SDY_0519 iron-enterobactin transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_005278925.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: ssn:SSON_0538 ferric enterobactin transport protein FepE YP_005278926.1 KEGG: eoi:ECO111_0616 enterobactin synthase subunit F; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Thioesterase YP_005278927.1 PFAM: MbtH domain protein; KEGG: eoh:ECO103_0593 hypothetical protein YP_005278928.1 KEGG: eoi:ECO111_0614 enterobactin/ferric enterobactin esterase; manually curated; PFAM: esterase YP_005278929.1 KEGG: eoi:ECO111_0613 outer membrane receptor FepA; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_005278930.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: sbo:SBO_0443 phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex YP_005278931.1 PFAM: glutamate--cysteine ligase GCS2; KEGG: eoh:ECO103_0586 carboxylate-amine ligase YP_005278932.1 PFAM: protein of unknown function DUF1158; KEGG: sbc:SbBS512_E0474 putative lipoprotein YP_005278933.1 KEGG: sdy:SDY_0492 hypothetical protein YP_005278934.1 KEGG: sbo:SBO_0439 dihydropteridine reductase; PFAM: nitroreductase YP_005278935.1 PFAM: MscS Mechanosensitive ion channel; KEGG: eoh:ECO103_0582 putative mechanosensitive channel YP_005278936.1 PFAM: amino acid permease-associated region; KEGG: sfv:SFV_0516 phenylalanine transporter YP_005278937.1 KEGG: eoh:ECO103_0580 copper/silver efflux system protein CusA; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: acriflavin resistance protein YP_005278938.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: eoi:ECO111_0601 copper/silver efflux system membrane fusion protein CusB YP_005278939.1 KEGG: ebd:ECBD_3089 periplasmic copper-binding protein YP_005278940.1 KEGG: eoh:ECO103_0577 copper/silver efflux system outer membrane protein CusC; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_005278941.1 TIGRFAM: heavy metal response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; KEGG: ebd:ECBD_3091 DNA-binding transcriptional activator CusR; SMART: response regulator receiver YP_005278942.1 TIGRFAM: heavy metal sensor kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: ebd:ECBD_3092 sensor kinase CusS; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_005278943.1 TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; KEGG: eoj:ECO26_0641 putative Vgr protein YP_005278944.1 KEGG: ssn:SSON_0519 hypothetical protein YP_005278945.1 KEGG: eok:G2583_0728 rhs core protein with extension; TIGRFAM: YD repeat protein; PFAM: PAAR repeat-containing protein; YD repeat-containing protein YP_005278946.1 KEGG: bxe:Bxe_B1289 hypothetical protein YP_005278947.1 KEGG: ssn:SSON_0517 rhs core protein with extension; TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein YP_005278948.1 KEGG: plm:Plim_0975 hypothetical protein YP_005278949.1 PFAM: YD repeat-containing protein; KEGG: ssn:SSON_0517 rhs core protein with extension YP_005278950.1 KEGG: eok:G2583_0725 hypothetical protein YP_005278951.1 PFAM: transposase IS4 family protein; KEGG: eoi:ECO111_0591 putative H repeat-associated protein YP_005278952.1 PFAM: General secretory system II protein E domain protein; KEGG: eoj:ECO26_0635 bacteriophage N4 adsorption protein B YP_005278953.1 PFAM: Tetratricopeptide TPR_1 repeat-containing protein; KEGG: eoh:ECO103_0569 bacteriophage N4 receptor, outer membrane subunit YP_005278954.1 KEGG: eoi:ECO111_0588 hypothetical protein YP_005278955.1 KEGG: eoh:ECO103_0567 DNA-binding transcriptional activator EnvY of porin biosynthesis; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_005278956.1 manually curated; PFAM: response regulator receiver; regulatory protein LuxR; KEGG: eok:G2583_0655 fimbrial Z protein; SMART: response regulator receiver; regulatory protein LuxR YP_005278957.1 PFAM: Fimbrial protein domain-containing protein; KEGG: eoh:ECO103_0506 putative fimbrial protein YP_005278958.1 KEGG: eok:G2583_0653 involved in fimbrial asembly precursor YP_005278959.1 PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: eoh:ECO103_0503 pilin chaperone SfmC, periplasmic YP_005278960.1 PFAM: Fimbrial protein domain-containing protein; KEGG: ebd:ECBD_3128 fimbrial protein YP_005278961.1 KEGG: eoi:ECO111_0561 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_005278962.1 KEGG: sdy:SDY_0280 hypothetical protein YP_005278963.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: sbc:SbBS512_E0447 hypothetical protein YP_005278964.1 TIGRFAM: cysteinyl-tRNA synthetase; KEGG: sfv:SFV_0484 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR YP_005278965.1 KEGG: ebd:ECBD_3133 peptidyl-prolyl cis-trans isomerase B (rotamase B); PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type YP_005278966.1 KEGG: sbc:SbBS512_E0450 UDP-2,3-diacylglucosamine hydrolase; TIGRFAM: UDP-2,3-diacylglucosamine hydrolase; PFAM: metallophosphoesterase YP_005278967.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; KEGG: sbo:SBO_0420 phosphoribosylaminoimidazole carboxylase; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_005278968.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; KEGG: ebd:ECBD_3136 phosphoribosylaminoimidazole carboxylase ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp YP_005278969.1 TIGRFAM: carbamate kinase; KEGG: ssn:SSON_0497 carbamate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_005278970.1 PFAM: Protein of unknown function DUF2877; KEGG: eok:G2583_0640 putative carboxylase YP_005278971.1 PFAM: protein of unknown function DUF1116; KEGG: ebd:ECBD_3139 protein of unknown function DUF1116 YP_005278972.1 PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding domain protein; KEGG: ebd:ECBD_3140 membrane protein FdrA YP_005278973.1 KEGG: eoh:ECO103_0489 ureidoglycolate dehydrogenase; TIGRFAM: ureidoglycolate dehydrogenase; PFAM: Malate/L-lactate dehydrogenase YP_005278974.1 TIGRFAM: allantoate amidohydrolase; amidase, hydantoinase/carbamoylase family; KEGG: ebd:ECBD_3142 allantoate amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_005278975.1 KEGG: ebd:ECBD_3143 hypothetical protein; TIGRFAM: allantoin catabolism protein; PFAM: protein of unknown function DUF861 cupin_3; Cupin 2 conserved barrel domain protein YP_005278976.1 TIGRFAM: glycerate kinase; KEGG: eoh:ECO103_0486 glycerate kinase II; PFAM: glycerate kinase YP_005278977.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: ebd:ECBD_3145 putative purine permease YbbY YP_005278978.1 KEGG: eoi:ECO111_0544 allantoinase; TIGRFAM: allantoinase; PFAM: amidohydrolase YP_005278979.1 KEGG: eoh:ECO103_0483 allantoin permease; TIGRFAM: NCS1 nucleoside transporter family; PFAM: permease for cytosine/purines uracil thiamine allantoin YP_005278980.1 KEGG: eoh:ECO103_0482 tartronate semialdehyde reductase, NADH-dependent; TIGRFAM: 2-hydroxy-3-oxopropionate reductase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding YP_005278981.1 TIGRFAM: hydroxypyruvate isomerase; KEGG: eok:G2583_0628 glyoxylate-induced protein; PFAM: Xylose isomerase domain-containing protein TIM barrel YP_005278982.1 KEGG: ebd:ECBD_3150 glyoxylate carboligase; TIGRFAM: glyoxylate carboligase; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein YP_005278983.1 KEGG: sbo:SBO_0410 DNA-binding transcriptional repressor AllR; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_005278984.1 KEGG: eoh:ECO103_0478 ureidoglycolate hydrolase; PFAM: Ureidoglycolate hydrolase YP_005278985.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: eoh:ECO103_0477 DNA-binding transcriptional activator AllS YP_005278986.1 KEGG: eoh:ECO103_0476 tRNA 2-selenouridine synthase; TIGRFAM: tRNA 2-selenouridine synthase; SMART: Rhodanese domain protein YP_005278987.1 KEGG: sdy:SDY_0400 hypothetical protein YP_005278988.1 KEGG: eoh:ECO103_0474 hypothetical protein YP_005278989.1 PFAM: RHS protein; KEGG: ebd:ECBD_3157 rhs protein YP_005278990.1 KEGG: ebd:ECBD_3158 hypothetical protein YP_005278991.1 KEGG: ebw:BWG_0378 RhsD element protein; TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein YP_005278992.1 PFAM: protein of unknown function DUF214; KEGG: ebw:BWG_0377 putative inner membrane protein YP_005278993.1 KEGG: sbc:SbBS512_E0430 putative ABC transporter ATP-binding protein YbbA; PFAM: ABC transporter related; SMART: AAA ATPase YP_005278994.1 manually curated; KEGG: efe:EFER_0552 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; PFAM: lipolytic protein G-D-S-L family YP_005278995.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ssn:SSON_0482 short chain dehydrogenase YP_005278996.1 PFAM: Thioredoxin domain-containing protein; KEGG: sdy:SDY_0407 putative thioredoxin-like protein YP_005278997.1 PFAM: Conserved hypothetical protein CHP00245; KEGG: ssn:SSON_0480 putative metal resistance protein YP_005278998.1 KEGG: ebd:ECBD_3166 putative ABC transporter ATP-binding protein YbbL; PFAM: ABC transporter related; SMART: AAA ATPase YP_005278999.1 KEGG: sbo:SBO_0391 putative protease; PFAM: band 7 protein; SMART: band 7 protein YP_005279000.1 PFAM: protein of unknown function DUF107; KEGG: ebw:BWG_0369 conserved inner membrane protein YP_005279001.1 TIGRFAM: Cu(I)-responsive transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; KEGG: sbc:SbBS512_E0422 DNA-binding transcriptional regulator CueR; SMART: regulatory protein MerR YP_005279002.1 PFAM: amino acid permease-associated region; KEGG: ssn:SSON_0475 putative amino acid/amine transport protein YP_005279003.1 TIGRFAM: Glutaminase, core; KEGG: ssn:SSON_0474 glutaminase; PFAM: Glutaminase, core YP_005279004.1 KEGG: eoi:ECO111_0519 copper exporting ATPase; TIGRFAM: copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase YP_005279005.1 TIGRFAM: addiction module antidote protein, HigA family; PFAM: helix-turn-helix domain protein; KEGG: ssn:SSON_0472 hypothetical protein; SMART: helix-turn-helix domain protein YP_005279006.1 PFAM: GumN family protein; KEGG: eoi:ECO111_0517 hypothetical protein YP_005279007.1 KEGG: sdy:SDY_0437 hypothetical protein; TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region YP_005279008.1 PFAM: 5'-Nucleotidase domain-containing protein; metallophosphoesterase; KEGG: eoh:ECO103_0456 bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor YP_005279009.1 PFAM: major facilitator superfamily MFS_1; KEGG: eoi:ECO111_0514 putative fosmidomycin efflux system protein Fsr YP_005279010.1 KEGG: eoi:ECO111_0513 putative cation:proton antiport protein; TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein YP_005279011.1 KEGG: sbc:SbBS512_E0409 inosine kinase; PFAM: PfkB domain protein YP_005279012.1 KEGG: eoh:ECO103_0452 acetyl esterase YP_005279013.1 TIGRFAM: ferrochelatase; KEGG: eoh:ECO103_0451 ferrochelatase; PFAM: ferrochelatase YP_005279014.1 manually curated; TIGRFAM: adenylate kinase; KEGG: eok:G2583_0586 adenylate kinase; PFAM: adenylate kinase; adenylate kinase lid domain-containing protein YP_005279015.1 KEGG: eoh:ECO103_0449 heat shock protein 90; PFAM: Heat shock protein Hsp90-like; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_005279016.1 TIGRFAM: recombination protein RecR; PFAM: TOPRIM domain-containing protein; Zinc finger C4-type, RecR; KEGG: sbc:SbBS512_E0404 recombination protein RecR; SMART: Toprim sub domain-containing protein YP_005279017.1 PFAM: Uncharacterised protein family UPF0133; KEGG: sdy:SDY_0448 hypothetical protein YP_005279018.1 TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; KEGG: eoh:ECO103_0446 DNA polymerase III subunits gamma and tau; SMART: AAA ATPase YP_005279019.1 KEGG: sdy:SDY_0450 adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_005279020.1 PFAM: protein of unknown function DUF454; KEGG: sdy:SDY_0451 hypothetical protein YP_005279021.1 PFAM: Primosomal replication priB and priC; KEGG: sbc:SbBS512_E0399 primosomal replication protein N'' YP_005279022.1 PFAM: Protein of unknown function DUF2496, YbaM-related; KEGG: sbc:SbBS512_E0398 hypothetical protein YP_005279023.1 PFAM: MscS Mechanosensitive ion channel; KEGG: ssn:SSON_0452 potassium efflux protein KefA YP_005279024.1 PFAM: Tetracycline transcriptional repressor MAATS-type domain-containing protein; regulatory protein TetR; KEGG: sdy:SDY_0455 DNA-binding transcriptional repressor AcrR YP_005279025.1 KEGG: ebd:ECBD_3193 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein YP_005279026.1 KEGG: sbo:SBO_0362 acridine efflux pump; TIGRFAM: transporter, hydrophobe/amphiphile efflux-1 (HAE1) family; PFAM: acriflavin resistance protein YP_005279027.1 PFAM: Biofilm formation regulator YbaJ; KEGG: sdy:SDY_0458 hypothetical protein YP_005279028.1 PFAM: Haemolysin expression modulating family protein; KEGG: sdy:SDY_0459 hemolysin expression-modulating protein YP_005279029.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: sdy:SDY_0460 maltose O-acetyltransferase YP_005279030.1 PFAM: Extracytoplasmic function sigma factor YlaC; KEGG: sdy:SDY_0461 hypothetical protein YP_005279031.1 KEGG: eoh:ECO103_0433 hypothetical protein; PFAM: EAL domain protein; SMART: EAL domain protein YP_005279032.1 PFAM: protein of unknown function DUF1428; KEGG: sdy:SDY_0392 hypothetical protein YP_005279033.1 KEGG: sdy:SDY_0391 hypothetical protein; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding YP_005279034.1 KEGG: sbo:SBO_0348 glycoprotein/polysaccharide metabolism YP_005279035.1 KEGG: ssn:SSON_0440 acyl-CoA thioesterase II; TIGRFAM: acyl-CoA thioesterase II; PFAM: acyl-CoA thioesterase YP_005279036.1 KEGG: ssn:SSON_0439 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter YP_005279037.1 KEGG: sfv:SFV_0424 nitrogen regulatory protein P-II 2; manually curated; PFAM: nitrogen regulatory protein P-II YP_005279038.1 KEGG: sbo:SBO_0344 putative multidrug transporter membrane\ATP-binding components; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_005279039.1 KEGG: ebd:ECBD_3207 putative multidrug transporter membrane\ATP-binding components; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_005279040.1 manually curated; PFAM: Transcription regulator AsnC-type-like; KEGG: eok:G2583_0559 putative transcriptional regulator YbaO; SMART: Transcription regulator AsnC-type YP_005279041.1 manually curated; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; KEGG: ssn:SSON_0434 hypothetical protein; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_005279042.1 PFAM: extracellular solute-binding protein family 5; KEGG: sbc:SbBS512_E0368 extracellular solute-binding protein YP_005279043.1 KEGG: sbc:SbBS512_E0367 queuosine biosynthesis protein QueC; TIGRFAM: exsB protein; PFAM: Queuosine synthesis-like YP_005279044.1 PFAM: thioesterase superfamily protein; KEGG: sbc:SbBS512_E0366 thioesterase family protein YP_005279045.1 TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; KEGG: sdy:SDY_0290 hypothetical protein YP_005279046.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SurA domain; KEGG: sbo:SBO_0335 peptidyl-prolyl cis-trans isomerase (rotamase D) YP_005279047.1 KEGG: sdy:SDY_0292 transcriptional regulator HU subunit beta; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_005279048.1 SMART: peptidase S16 lon domain protein; AAA ATPase; TIGRFAM: ATP-dependent protease La; KEGG: ssn:SSON_0422 DNA-binding ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; AAA ATPase central domain protein YP_005279049.1 TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; KEGG: sdy:SDY_0294 ATP-dependent protease ATP-binding subunit ClpX; SMART: AAA ATPase YP_005279050.1 TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; KEGG: sdy:SDY_0295 ATP-dependent Clp protease proteolytic subunit; PFAM: peptidase S14 ClpP YP_005279051.1 KEGG: ssn:SSON_0419 trigger factor; TIGRFAM: trigger factor; PFAM: trigger factor domain-containing protein; peptidylprolyl isomerase FKBP-type YP_005279052.1 PFAM: BolA family protein; KEGG: sdy:SDY_0298 transcriptional regulator BolA YP_005279053.1 KEGG: sfv:SFV_0409 hypothetical protein; manually curated; PFAM: Uncharacterized lipoprotein YP_005279054.1 KEGG: sbc:SbBS512_E0355 muropeptide transporter; TIGRFAM: AmpG-related permease; PFAM: major facilitator superfamily MFS_1 YP_005279055.1 KEGG: ebd:ECBD_3226 cytochrome o ubiquinol oxidase subunit II; TIGRFAM: ubiquinol oxidase, subunit II; PFAM: COX aromatic rich domain protein; cytochrome c oxidase subunit II YP_005279056.1 TIGRFAM: cytochrome o ubiquinol oxidase, subunit I; KEGG: ssn:SSON_0414 cytochrome o ubiquinol oxidase subunit I; PFAM: cytochrome c oxidase subunit I YP_005279057.1 KEGG: ssn:SSON_0413 cytochrome o ubiquinol oxidase subunit III; TIGRFAM: cytochrome o ubiquinol oxidase, subunit III; PFAM: cytochrome c oxidase subunit III YP_005279058.1 KEGG: sbo:SBO_0323 cytochrome o ubiquinol oxidase subunit IV; TIGRFAM: cytochrome o ubiquinol oxidase subunit IV; PFAM: cytochrome C oxidase subunit IV YP_005279059.1 KEGG: sbo:SBO_0322 protoheme IX farnesyltransferase; TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase YP_005279060.1 PFAM: protein of unknown function DUF1778; KEGG: ssn:SSON_0410 hypothetical protein YP_005279061.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ssn:SSON_0409 putative acetyltransferase YP_005279062.1 PFAM: major facilitator superfamily MFS_1; KEGG: ebd:ECBD_3234 major facilitator superfamily MFS_1 YP_005279063.1 KEGG: sbc:SbBS512_E0348 putative nucleotide-binding protein; manually curated; PFAM: protein of unknown function DUF520 YP_005279064.1 TIGRFAM: 2-dehydropantoate 2-reductase; KEGG: ebd:ECBD_3236 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_005279065.1 KEGG: sbc:SbBS512_E0346 DJ-1 family protein; TIGRFAM: DJ-1 family protein; PFAM: ThiJ/PfpI domain-containing protein YP_005279066.1 KEGG: eoh:ECO103_0397 thiamine biosynthesis protein ThiI; TIGRFAM: thiamine biosynthesis/tRNA modification protein ThiI; PFAM: Thiamine biosynthesis protein-like; THUMP domain-containing protein YP_005279067.1 KEGG: sdy:SDY_0308 exodeoxyribonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit YP_005279068.1 PFAM: Polyprenyl synthetase; KEGG: eoh:ECO103_0395 geranyltranstransferase YP_005279069.1 KEGG: eoi:ECO111_0450 1-deoxy-D-xylulose-5-phosphate synthase; TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain-containing protein YP_005279070.1 PFAM: aldo/keto reductase; KEGG: ebw:BWG_0301 2-carboxybenzaldehyde reductase YP_005279071.1 KEGG: sbc:SbBS512_E0339 phosphatidylglycerophosphatase A; PFAM: phosphatidylglycerophosphatase A YP_005279072.1 TIGRFAM: thiamine-monophosphate kinase; KEGG: eoh:ECO103_0391 thiamine monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_005279073.1 KEGG: sdy:SDY_0318 transcription antitermination protein NusB; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44 YP_005279074.1 KEGG: cko:CKO_02746 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase YP_005279075.1 TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: eoi:ECO111_0444 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding YP_005279076.1 PFAM: ATP-cone domain protein; KEGG: sdy:SDY_0321 transcriptional regulator NrdR YP_005279077.1 KEGG: eoi:ECO111_0442 hypothetical protein YP_005279078.1 PFAM: Nucleoside-specific channel-forming protein, Tsx-like; KEGG: sdy:SDY_0323 nucleoside channel YP_005279079.1 KEGG: sdy:SDY_0324 hypothetical protein; PFAM: HNH endonuclease; SMART: HNH nuclease YP_005279080.1 KEGG: sbc:SbBS512_E0328 preprotein translocase subunit SecF; TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein YP_005279081.1 KEGG: sdy:SDY_0326 preprotein translocase subunit SecD; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein YP_005279082.1 KEGG: sdy:SDY_0327 preprotein translocase subunit YajC; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein YP_005279083.1 TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; KEGG: sdy:SDY_0328 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase YP_005279084.1 KEGG: sdy:SDY_0329 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein YP_005279085.1 KEGG: ssn:SSON_0381 acyl carrier protein phosphodiesterase; PFAM: protein of unknown function DUF479 YP_005279086.1 KEGG: eoj:ECO26_0435 maltodextrin glucosidase; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein Ig domain protein region domain protein; SMART: alpha amylase catalytic sub domain YP_005279087.1 PFAM: amino acid permease-associated region; KEGG: sdy:SDY_0335 putative proline-specific permease YP_005279088.1 KEGG: sdy:SDY_0336 branched chain amino acid transport system II carrier protein; TIGRFAM: branched-chain amino acid transport system II carrier protein; PFAM: branched-chain amino acid transport system II carrier protein YP_005279089.1 TIGRFAM: phosphate regulon sensor kinase PhoR; PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; KEGG: ebw:BWG_0282 phosphate regulon sensor protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein YP_005279090.1 TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; KEGG: sbc:SbBS512_E0318 transcriptional regulator PhoB; SMART: response regulator receiver YP_005279091.1 KEGG: ebd:ECBD_3263 exonuclease subunit SbcD; TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase YP_005279092.1 KEGG: etw:ECSP_0459 exonuclease subunit SbcC; TIGRFAM: exonuclease SbcC; PFAM: SMC domain protein YP_005279093.1 PFAM: major facilitator superfamily MFS_1; KEGG: eok:G2583_0504 protein AraJ YP_005279094.1 PFAM: ROK family protein; KEGG: eoi:ECO111_0424 fructokinase YP_005279095.1 PFAM: exonuclease RdgC; KEGG: ebd:ECBD_3268 putative exonuclease RdgC YP_005279096.1 manually curated; KEGG: sbc:SbBS512_E0310 hypothetical protein YP_005279097.1 PFAM: protein of unknown function DUF1255; KEGG: sbc:SbBS512_E0308 hypothetical protein YP_005279098.1 PFAM: AroM family protein; KEGG: sbc:SbBS512_E0307 hypothetical protein YP_005279099.1 KEGG: sbc:SbBS512_E0306 hypothetical protein YP_005279100.1 KEGG: sbo:SBO_0283 shikimate kinase II; PFAM: shikimate kinase YP_005279101.1 PFAM: protein of unknown function DUF188; KEGG: sdy:SDY_0357 hypothetical protein YP_005279102.1 TIGRFAM: pyrroline-5-carboxylate reductase; KEGG: sfx:S0330 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent YP_005279103.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; MASE2 domain protein; KEGG: sbo:SBO_0280 diguanylate cyclase AdrA; SMART: GGDEF domain containing protein YP_005279104.1 PFAM: PsiF repeat-containing protein; KEGG: eoh:ECO103_0359 hypothetical protein YP_005279105.1 PFAM: Alkaline phosphatase; KEGG: ebw:BWG_0267 alkaline phosphatase; SMART: Alkaline phosphatase YP_005279106.1 PFAM: Sigma-S stabilisation anti-adaptor protein; KEGG: ssn:SSON_0357 hypothetical protein YP_005279107.1 TIGRFAM: D-alanine/D-alanine ligase; KEGG: sfx:S0254 D-alanyl-alanine synthetase A; PFAM: D-alanine--D-alanine ligase domain protein YP_005279108.1 manually curated; KEGG: sbc:SbBS512_E0297 hypothetical protein YP_005279109.1 KEGG: sbc:SbBS512_E0296 hypothetical protein YP_005279110.1 PFAM: protein of unknown function DUF1615; KEGG: sbo:SBO_0273 hypothetical protein YP_005279111.1 PFAM: SbmABacA family protein; KEGG: ebd:ECBD_3287 transport protein YP_005279112.1 KEGG: ebd:ECBD_3288 hypothetical protein YP_005279113.1 PFAM: beta-lactamase; KEGG: sbc:SbBS512_E0293 beta-lactam binding protein AmpH YP_005279114.1 KEGG: ssn:SSON_0350 putative DNA-binding transcriptional regulator YP_005279115.1 TIGRFAM: outer membrane autotransporter barrel domain protein; PFAM: Autotransporter beta- domain protein; KEGG: eok:G2583_0482 putative flagellin structural protein; SMART: Autotransporter beta- domain protein YP_005279116.1 KEGG: sdy:SDY_0501 delta-aminolevulinic acid dehydratase; PFAM: delta-aminolevulinic acid dehydratase YP_005279117.1 KEGG: eoh:ECO103_0347 taurine dioxygenase; PFAM: Taurine catabolism dioxygenase TauD/TfdA YP_005279118.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sfv:SFV_0331 taurine transporter subunit YP_005279119.1 KEGG: ssn:SSON_0344 taurine transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_005279120.1 TIGRFAM: taurine ABC transporter, periplasmic binding protein; PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: ebd:ECBD_3296 taurine transporter substrate binding subunit; SMART: extracellular solute-binding protein family 3 YP_005279121.1 PFAM: LmbE family protein; KEGG: eoh:ECO103_0343 hypothetical protein YP_005279122.1 PFAM: glycosyl transferase family 2; KEGG: eoj:ECO26_0396 putative glucosyltransferase YP_005279123.1 KEGG: eoh:ECO103_0341 putative transferase; manually curated; PFAM: transferase hexapeptide repeat containing protein YP_005279124.1 KEGG: sbc:SbBS512_E0274 hypothetical protein YP_005279125.1 PFAM: protein of unknown function DUF156; KEGG: sbc:SbBS512_E0272 regulator protein FrmR YP_005279126.1 KEGG: sbc:SbBS512_E0271 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein YP_005279127.1 TIGRFAM: S-formylglutathione hydrolase; KEGG: ssn:SSON_0334 putative esterase; PFAM: esterase YP_005279128.1 PFAM: Protein of unknown function DUF2058; KEGG: ebd:ECBD_3303 hypothetical protein YP_005279129.1 KEGG: eoj:ECO26_0389 putative 3-hydroxyphenylpropionic transporter MhpT; TIGRFAM: benzoate transport; PFAM: major facilitator superfamily MFS_1 YP_005279130.1 KEGG: eoh:ECO103_0334 4-hydroxy-2-ketovalerate aldolase; TIGRFAM: 4-hydroxy-2-oxovalerate aldolase; PFAM: pyruvate carboxyltransferase; DmpG communication domain protein YP_005279131.1 TIGRFAM: acetaldehyde dehydrogenase (acetylating); KEGG: ssn:SSON_0330 acetaldehyde dehydrogenase; PFAM: Acetaldehyde dehydrogenase ; Semialdehyde dehydrogenase NAD - binding YP_005279132.1 KEGG: eoi:ECO111_0386 2-keto-4-pentenoate hydratase; PFAM: fumarylacetoacetate (FAA) hydrolase YP_005279133.1 PFAM: alpha/beta hydrolase fold; KEGG: ebd:ECBD_3308 alpha/beta hydrolase fold protein YP_005279134.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: eoi:ECO111_0384 3-(2,3-dihydroxyphenyl)propionate dioxygenase YP_005279135.1 PFAM: monooxygenase FAD-binding; KEGG: eoi:ECO111_0383 3-(3-hydroxyphenyl)propionate hydroxylase YP_005279136.1 KEGG: eok:G2583_0459 DNA-binding protein transcriptional activator, 3HPP-binding protein; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR YP_005279137.1 KEGG: ebd:ECBD_3312 lac repressor; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_005279138.1 PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 42 domain 5 loop region; KEGG: ebd:ECBD_3313 beta-D-galactosidase YP_005279139.1 TIGRFAM: oligosaccharide/H+ symporter, major facilitator superfamily (MFS); KEGG: ebd:ECBD_3314 galactoside permease YP_005279140.1 KEGG: eoh:ECO103_0324 galactoside O-acetyltransferase YP_005279141.1 KEGG: ebd:ECBD_3316 putative cyanate transporter; TIGRFAM: cyanate transporter; PFAM: major facilitator superfamily MFS_1 YP_005279142.1 TIGRFAM: cyanate lyase; KEGG: eoh:ECO103_0322 cyanate hydratase; PFAM: Cyanate lyase domain protein YP_005279143.1 KEGG: ebd:ECBD_3318 carbonate dehydratase; PFAM: carbonic anhydrase YP_005279144.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eoi:ECO111_0375 DNA-binding transcriptional regulator CynR YP_005279145.1 KEGG: eoh:ECO103_0319 cytosine deaminase; PFAM: Amidohydrolase 3 YP_005279146.1 KEGG: ebd:ECBD_3321 cytosine permease; TIGRFAM: NCS1 nucleoside transporter family; PFAM: permease for cytosine/purines uracil thiamine allantoin YP_005279147.1 KEGG: eoh:ECO103_0317 propionyl-CoA synthetase; TIGRFAM: propionate/CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_005279148.1 TIGRFAM: 2-methylcitrate dehydratase; KEGG: eoh:ECO103_0316 2-methylcitrate dehydratase; PFAM: MmgE/PrpD family protein YP_005279149.1 TIGRFAM: 2-methylcitrate synthase/citrate synthase II; KEGG: ebd:ECBD_3324 methylcitrate synthase; PFAM: Citrate synthase YP_005279150.1 KEGG: eoh:ECO103_0314 2-methylisocitrate lyase; TIGRFAM: methylisocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase YP_005279151.1 TIGRFAM: propionate catabolism operon regulatory protein PrpR; PFAM: sigma-54 factor interaction domain-containing protein; Propionate catabolism activator domain-containing protein; helix-turn-helix Fis-type; KEGG: eoh:ECO103_0313 DNA-binding transcriptional activator PrpR; SMART: AAA ATPase YP_005279152.1 PFAM: protein of unknown function DUF1471; KEGG: eok:G2583_0440 hypothetical protein YP_005279153.1 manually curated; TIGRFAM: homoserine/threonine efflux pump; KEGG: ebr:ECB_00283 neutral amino-acid efflux system; PFAM: Lysine exporter protein (LYSE/YGGA) YP_005279154.1 KEGG: eoi:ECO111_0365 hypothetical protein YP_005279155.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ebd:ECBD_3332 alcohol dehydrogenase zinc-binding domain protein YP_005279156.1 PFAM: inner-membrane translocator; KEGG: eok:G2583_0434 putative permease of transport system YP_005279157.1 PFAM: inner-membrane translocator; KEGG: eok:G2583_0433 putative permease of transport system probably ribose specific YP_005279158.1 KEGG: eoh:ECO103_0304 putative ATP-binding component of sugar ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase YP_005279159.1 KEGG: eoh:ECO103_0303 putative sugar-binding protein YP_005279160.1 PFAM: protein of unknown function DUF437; KEGG: eoh:ECO103_0302 hypothetical protein YP_005279161.1 PFAM: Amidohydrolase 3; KEGG: eoi:ECO111_0358 putative deaminase YP_005279162.1 KEGG: eoh:ECO103_0300 putative carbamate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_005279163.1 PFAM: protein of unknown function DUF1116; KEGG: eoh:ECO103_0299 hypothetical protein YP_005279164.1 KEGG: eoh:ECO103_0298 putative acyl-CoA synthetase YP_005279165.1 KEGG: eoj:ECO26_0354 hypothetical protein YP_005279166.1 KEGG: ebd:ECBD_3339 ankyrin YP_005279167.1 PFAM: protein of unknown function DUF1097; KEGG: ebd:ECBD_3340 protein of unknown function DUF1097 YP_005279168.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebd:ECBD_3341 transcriptional regulator, LysR family YP_005279169.1 KEGG: eoh:ECO103_0293 putative DNA-binding transcriptional regulator; PFAM: EAL domain protein; regulatory protein LuxR; SMART: EAL domain protein; regulatory protein LuxR YP_005279170.1 manually curated; TIGRFAM: outer membrane autotransporter barrel domain protein; KEGG: eok:G2583_0419 AidA-I adhesin-like protein; PFAM: Autotransporter beta- domain protein; Pertactin YP_005279171.1 KEGG: ebd:ECBD_3344 choline transport protein BetT; TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter YP_005279172.1 KEGG: sfv:SFV_0324 transcriptional regulator BetI; TIGRFAM: transcriptional repressor BetI; PFAM: regulatory protein TetR YP_005279173.1 KEGG: ebd:ECBD_3346 betaine aldehyde dehydrogenase; TIGRFAM: betaine aldehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_005279174.1 KEGG: eoh:ECO103_0288 choline dehydrogenase; TIGRFAM: choline dehydrogenase; PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase YP_005279175.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: eoi:ECO111_0344 putative inner membrane protein YP_005279176.1 PFAM: protein of unknown function DUF162; KEGG: sfv:SFV_0319 putative transporter YP_005279177.1 KEGG: ssn:SSON_0317 hypothetical protein; TIGRFAM: iron-sulfur cluster binding protein; PFAM: protein of unknown function DUF162 YP_005279178.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: ssn:SSON_0318 putative dehydrogenase subunit YP_005279179.1 KEGG: eoh:ECO103_0281 putative DNA-binding transcriptional regulator, AraC-type; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_005279180.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: ssn:SSON_0320 pyridine nucleotide-disulfide oxidoreductase YP_005279181.1 KEGG: ebd:ECBD_3355 protein of unknown function DUF1471; manually curated; PFAM: protein of unknown function DUF1471 YP_005279182.1 PFAM: protein of unknown function DUF417; KEGG: ebd:ECBD_3356 protein of unknown function DUF417 YP_005279183.1 PFAM: aldo/keto reductase; KEGG: sbc:SbBS512_E0266 oxidoreductase, aldo/keto reductase family YP_005279184.1 KEGG: eok:G2583_0398 putative AraC-like transcriptional regulator; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_005279185.1 KEGG: eoh:ECO103_0275 putative invasin; PFAM: Ig domain protein group 1 domain protein; SMART: Ig domain protein group 1 domain protein YP_005279187.1 KEGG: ebd:ECBD_3359 hypothetical protein YP_005279188.1 KEGG: ebd:ECBD_3360 50S ribosomal protein L31 type B; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31 YP_005279189.1 KEGG: ebd:ECBD_3361 50S ribosomal protein L36; TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36 YP_005279190.1 KEGG: sbo:SBO_0225 putative regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_005279191.1 KEGG: eok:G2583_0385 hypothetical protein YP_005279192.1 KEGG: sbo:SBO_0227 hypothetical protein YP_005279193.1 KEGG: eoj:ECO26_0326 putative outer membrane usher protein YP_005279194.1 KEGG: eoj:ECO26_0325 hypothetical protein YP_005279195.1 KEGG: eoj:ECO26_0324 putative chaperone YP_005279196.1 KEGG: ebd:ECBD_3369 protein of unknown function UPF0153; manually curated; PFAM: protein of unknown function UPF0153 YP_005279197.1 PFAM: [2Fe-2S]-binding domain-containing protein; ferredoxin; KEGG: ebd:ECBD_3371 putative xanthine dehydrogenase iron-sulfur-binding subunit YP_005279198.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: eoh:ECO103_0262 putative oxidoreductase YP_005279199.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: eoh:ECO103_0261 putative oxidoreductase YP_005279200.1 PFAM: protein of unknown function DUF182; KEGG: eoh:ECO103_0260 hypothetical protein YP_005279201.1 PFAM: LysR substrate-binding; KEGG: eoh:ECO103_0259 putative transcriptional regulator LysR-type YP_005279202.1 TIGRFAM: gamma-glutamyl phosphate reductase; KEGG: eoh:ECO103_0258 gamma-glutamyl phosphate reductase; PFAM: Aldehyde Dehydrogenase YP_005279203.1 TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; KEGG: sdy:SDY_0474 gamma-glutamyl kinase; SMART: PUA domain containing protein YP_005279204.1 PFAM: porin Gram-negative type; KEGG: eok:G2583_0277 outer membrane protein (porin) YP_005279205.1 PFAM: transcriptional regulator Crl; KEGG: sbc:SbBS512_E0237 DNA-binding transcriptional regulator Crl YP_005279206.1 KEGG: eoh:ECO103_0254 fermentation/respiration switch protein YP_005279207.1 KEGG: sdy:SDY_0479 xanthine-guanine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_005279208.1 TIGRFAM: aminoacyl-histidine dipeptidase; KEGG: eoi:ECO111_0299 aminoacyl-histidine dipeptidase; PFAM: peptidase dimerisation domain protein; peptidase M20 YP_005279209.1 KEGG: sbc:SbBS512_E0233 peptide chain release factor-like protein; TIGRFAM: peptide chain release factor H; PFAM: Class I peptide chain release factor YP_005279210.1 KEGG: eoh:ECO103_0250 hypothetical protein; TIGRFAM: release factor H-coupled RctB family protein; PFAM: protein of unknown function UPF0027 YP_005279211.1 KEGG: sbc:SbBS512_E0229 hypothetical protein; manually curated; PFAM: GCN5-related N-acetyltransferase YP_005279212.1 KEGG: eoh:ECO103_0248 DNA polymerase IV; PFAM: UMUC domain protein DNA-repair protein YP_005279213.1 PFAM: OmpA/MotB domain protein; KEGG: eoi:ECO111_0294 hypothetical protein YP_005279214.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: eoj:ECO26_0287 flagellar motor protein MotA YP_005279215.1 KEGG: eoj:ECO26_0286 flagellar biosynthesis sigma factor; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein YP_005279216.1 PFAM: flagellar basal body-associated protein FliL; KEGG: eoi:ECO111_0291 putative lateral flagellar biogenesis protein YP_005279217.1 PFAM: Flagellar hook-length control protein-like, C-terminal domain; KEGG: eoj:ECO26_0284 putative lateral flagellar hook-length control protein YP_005279218.1 KEGG: eoi:ECO111_0289 putative lateral flagellar chaperone protein YP_005279219.1 KEGG: eoi:ECO111_0288 putative lateral flagellar protein, potentiates polymerization; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS YP_005279220.1 PFAM: flagellar hook-associated 2 domain-containing protein; flagellar hook-associated protein 2 domain-containing protein; KEGG: eoi:ECO111_0287 putative lateral flagellar filament capping protein YP_005279221.1 PFAM: flagellin domain protein; KEGG: eoi:ECO111_0286 putative lateral flagellin YP_005279222.1 PFAM: transcriptional regulator domain-containing protein; KEGG: eoi:ECO111_0285 putative lateral flagellar putative transmembrane regulator YP_005279223.1 KEGG: eoj:ECO26_0278 putative lateral flagellar hook associated protein YP_005279224.1 KEGG: eoi:ECO111_0283 putative lateral flagellar hook-filament junction protein; TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein YP_005279225.1 KEGG: eoj:ECO26_0276 putative lateral flagellar hook-filament junction protein; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_005279226.1 PFAM: Flagellar protein FlgJ-like; KEGG: eoi:ECO111_0280 putative lateral flagellar peptidoglycan hydrolase YP_005279227.1 PFAM: flagellar P-ring protein; KEGG: eoi:ECO111_0279 flagellar basal body P-ring protein YP_005279228.1 PFAM: flagellar L-ring protein; KEGG: eoi:ECO111_0278 flagellar basal body L-ring protein YP_005279229.1 KEGG: eoj:ECO26_0272 flagellar basal body rod protein FlgG; TIGRFAM: flagellar basal-body rod protein FlgG; fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_005279230.1 KEGG: eoi:ECO111_0276 flagellar basal body rod protein FlgF; TIGRFAM: fagellar hook-basal body protein; PFAM: flagellar basal body rod protein YP_005279231.1 KEGG: eoi:ECO111_0275 putative lateral flagellar hook protein; TIGRFAM: fagellar hook-basal body protein; PFAM: flagellar basal body FlaE domain protein; flagellar basal body rod protein; protein of unknown function DUF1078 domain protein YP_005279232.1 PFAM: flagellar hook capping protein; KEGG: eoi:ECO111_0274 putative lateral flagellar hook assembly protein YP_005279233.1 KEGG: eoi:ECO111_0273 flagellar basal body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein YP_005279234.1 TIGRFAM: flagellar basal-body rod protein FlgB; KEGG: eoi:ECO111_0272 putative lateral flagellar rod protein YP_005279235.1 TIGRFAM: flagella basal body P-ring formation protein FlgA; KEGG: eoi:ECO111_0271 putative lateral flagellar P-ring addition protein YP_005279236.1 KEGG: eoi:ECO111_0270 putative lateral flagellar anti-sigma factor 28 protein; TIGRFAM: Anti-sigma-28 factor FlgM family protein; PFAM: Anti-sigma-28 factor FlgM family protein YP_005279237.1 PFAM: FlgN family protein; KEGG: eoi:ECO111_0269 putative lateral flagellar chaperone protein YP_005279238.1 KEGG: eoi:ECO111_0268 putative lateral flagellar associated protein YP_005279239.1 PFAM: glycosyl transferase family 2; KEGG: eoi:ECO111_0267 putative glycosyltransferase YP_005279240.1 PFAM: MuA-transposase/repressor protein CI DNA-binding; KEGG: ebw:BWG_3689 repressor protein CI YP_005279241.1 KEGG: pay:PAU_01004 putative phage transcriptional regulator YP_005279242.1 PFAM: Mu transposase; Transposase-like Mu ; MuA-transposase/repressor protein CI DNA-binding; KEGG: sfv:SFV_0707 putative phage transposase YP_005279243.1 PFAM: B transposition protein domain protein; ATPase associated with various cellular activities AAA_5; KEGG: xne:XNC1_3358 DNA transposition protein YP_005279244.1 KEGG: acp:A2cp1_0644 FkbM family methyltransferase YP_005279245.1 KEGG: glo:Glov_1237 acetyl-CoA carboxylase, carboxyl transferase, beta subunit YP_005279246.1 KEGG: bdu:BDU_4026 vlp protein, gamma subfamily YP_005279247.1 KEGG: bth:BT_0327 glutamine ABC transporter, periplasmic glutamine-binding protein (GlnH) YP_005279248.1 KEGG: ypb:YPTS_3265 phage-like protein YP_005279249.1 KEGG: pag:PLES_15581 COG4396: Mu-like prophage host-nuclease inhibitor protein Gam YP_005279250.1 KEGG: cro:ROD_47011 putative prophage DNA binding protein YP_005279251.1 KEGG: cro:ROD_47021 hypothetical protein YP_005279252.1 KEGG: cro:ROD_47051 hypothetical protein YP_005279253.1 KEGG: cro:ROD_47061 hypothetical protein YP_005279254.1 KEGG: gau:GAU_2969 putative serine/threonine protein kinase YP_005279255.1 KEGG: xne:XNC1_3365 hypothetical protein YP_005279256.1 PFAM: Mor transcription activator domain protein; KEGG: vco:VC0395_A0772 positive regulator of late transcription YP_005279257.1 KEGG: son:SO_2672 hypothetical protein YP_005279258.1 KEGG: aau:AAur_2862 hypothetical protein YP_005279260.1 PFAM: Mor transcription activator domain protein; KEGG: tau:Tola_0729 Mor transcription activator domain protein YP_005279261.1 KEGG: yps:YPTB1805 endolysin (lysis protein) (lysozyme); PFAM: glycoside hydrolase family 24 YP_005279262.1 KEGG: sed:SeD_A2275 putative Rz lytic protein YP_005279263.1 manually curated; KEGG: kpe:KPK_4147 hypothetical protein YP_005279264.1 KEGG: htu:Htur_4338 hypothetical protein YP_005279265.1 KEGG: cro:ROD_47131 putative prophage membrane protein YP_005279266.1 KEGG: tau:Tola_0736 hypothetical protein YP_005279267.1 KEGG: tau:Tola_0737 hypothetical protein YP_005279268.1 KEGG: cro:ROD_47161 putative terminase large subunit YP_005279269.1 PFAM: protein of unknown function DUF935; KEGG: cro:ROD_47171 putative phage portal protein YP_005279270.1 KEGG: cro:ROD_47181 putative phage head assembly protein; TIGRFAM: phage head morphogenesis protein, SPP1 gp7 family; PFAM: head morphogenesis protein SPP1 gp7 YP_005279271.1 TIGRFAM: phage virion morphogenesis protein; KEGG: cro:ROD_47191 hypothetical protein YP_005279272.1 PFAM: Mu-like prophage I protein; KEGG: hin:HI1504 I protein YP_005279273.1 KEGG: cro:ROD_47221 phage major head subunit YP_005279274.1 KEGG: son:SO_0676 hypothetical protein YP_005279275.1 PFAM: protein of unknown function DUF1320; KEGG: cro:ROD_47241 putative prophage membrane protein YP_005279276.1 PFAM: Domain of unknown function DUF1834; KEGG: cro:ROD_47251 hypothetical protein YP_005279277.1 KEGG: cro:ROD_47261 hypothetical protein YP_005279278.1 KEGG: cro:ROD_47271 phage tail sheath protein YP_005279279.1 PFAM: Tail tube protein, bacteriophage; KEGG: cro:ROD_47281 phage tail tube protein YP_005279280.1 PFAM: Mu-like prophage FluMu protein gp41; KEGG: cro:ROD_47291 hypothetical protein YP_005279281.1 TIGRFAM: phage tape measure protein; KEGG: cro:ROD_47301 phage tail tape measure protein YP_005279282.1 PFAM: DNA circulation family protein; KEGG: cro:ROD_47311 phage DNA circularisation protein YP_005279283.1 KEGG: cro:ROD_47321 putative phage baseplate protein YP_005279284.1 KEGG: cro:ROD_47331 phage baseplate assembly protein; TIGRFAM: phage baseplate assembly protein V; PFAM: Mu Gp45 domain protein YP_005279285.1 PFAM: GP46 family protein; KEGG: cro:ROD_47341 hypothetical protein YP_005279286.1 PFAM: Baseplate J family protein; KEGG: cro:ROD_47351 hypothetical protein YP_005279287.1 KEGG: cro:ROD_47361 hypothetical protein YP_005279288.1 PFAM: tail fiber repeat 2 protein; KEGG: sbo:SBO_1394 putative bacteriophage tail protein YP_005279289.1 PFAM: tail assembly chaperone gp38; KEGG: sbo:SBO_1393 putative tail fiber assembly protein YP_005279290.1 PFAM: tail assembly chaperone gp38; KEGG: cro:ROD_36601 phage tail fibre assembly protein YP_005279291.1 KEGG: eoh:ECO103_1890 putative bacteriophage tail protein YP_005279292.1 PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: sdy:SDY_1916 putative DNA-invertase YP_005279293.1 KEGG: cro:ROD_19792 putative prophage DNA modification regulator YP_005279294.1 KEGG: sdy:SDY_1915 phage Mu Mom-like protein YP_005279295.1 TIGRFAM: cytidyltransferase-related domain protein; KEGG: eoi:ECO111_0266 putative glycerol-3-phosphate cytidylyltransferase; PFAM: cytidylyltransferase YP_005279296.1 TIGRFAM: flagellar export protein FliJ; KEGG: eoi:ECO111_0265 putative lateral flagellar export/assembly protein YP_005279297.1 TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; KEGG: eoi:ECO111_0264 putative lateral flagellum-specific ATP synthase; SMART: AAA ATPase YP_005279298.1 PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: eoi:ECO111_0263 flagellar assembly protein H YP_005279299.1 PFAM: flagellar motor switch protein FliG; KEGG: eoj:ECO26_0256 flagellar motor switch protein G YP_005279300.1 KEGG: eoj:ECO26_0255 flagellar MS-ring protein; TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein YP_005279301.1 PFAM: flagellar hook-basal body complex protein FliE; KEGG: eoi:ECO111_0260 putative lateral flagellar basal-body component protein YP_005279302.1 KEGG: eoi:ECO111_0259 putative lateral flagellar RpoN-interacting regulatory protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase YP_005279303.1 PFAM: surface presentation of antigens (SPOA) protein; KEGG: eoi:ECO111_0258 putative lateral flagellar export/assembly protein YP_005279304.1 PFAM: surface presentation of antigens (SPOA) protein; KEGG: eoi:ECO111_0257 putative lateral flagellar motor switching and energizing component YP_005279305.1 KEGG: eoi:ECO111_0256 flagellar biosynthesis protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein YP_005279306.1 PFAM: export protein FliQ family 3; KEGG: eoj:ECO26_0249 putative lateral flagellar biosynthesis protein YP_005279307.1 KEGG: eoj:ECO26_0248 putative lateral flagellar export pore protein; TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein YP_005279308.1 PFAM: type III secretion exporter; KEGG: eoi:ECO111_0253 flagellar biosynthesis protein FlhB YP_005279309.1 PFAM: type III secretion FHIPEP protein; KEGG: eoi:ECO111_0252 putative lateral flagellar system protein YP_005279310.1 KEGG: eoh:ECO103_0245 putative HicA YP_005279311.1 KEGG: eoh:ECO103_0244 putative HicB YP_005279312.1 PFAM: NLP/P60 protein; KEGG: eoj:ECO26_0243 putative lipoprotein and C40 family peptidase YP_005279313.1 KEGG: ssn:SSON_0268 damage-inducible protein J; TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin YP_005279314.1 KEGG: ssn:SSON_0267 hypothetical protein; TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system YP_005279315.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: sdy:SDY_0250 hypothetical protein YP_005279316.1 PFAM: glutamine amidotransferase class-II; KEGG: sbc:SbBS512_E0220 glutamine amidotransferase, class II YP_005279317.1 KEGG: sbc:SbBS512_E0218 phosphoheptose isomerase; TIGRFAM: phosphoheptose isomerase; PFAM: sugar isomerase (SIS) YP_005279318.1 KEGG: eoh:ECO103_0237 acyl-CoA dehydrogenase; manually curated; PFAM: protein of unknown function DUF1974; acyl-CoA dehydrogenase domain-containing protein YP_005279319.1 KEGG: sbc:SbBS512_E0216 C-lysozyme inhibitor; manually curated; PFAM: Inhibitor of vertebrate lysozyme YP_005279320.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: sdy:SDY_0245 hypothetical protein YP_005279321.1 PFAM: transposase IS4 family protein; KEGG: ssn:SSON_0260 putative receptor YP_005279322.1 KEGG: mmz:MmarC7_0114 TPR repeat-containing protein YP_005279323.1 KEGG: etw:ECSP_0241 hypothetical protein; TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein YP_005279324.1 TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; KEGG: eoh:ECO103_0230 VgrG protein YP_005279325.1 KEGG: efe:EFER_1977 hypothetical protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796 YP_005279326.1 KEGG: ssn:SSON_0254 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: Uncharacterised conserved protein UCP028301 YP_005279327.1 KEGG: ssn:SSON_0253 hypothetical protein YP_005279328.1 KEGG: eoi:ECO111_0232 hypothetical protein; TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877 YP_005279329.1 KEGG: eok:G2583_0237 hypothetical protein; TIGRFAM: type VI secretion system lysozyme-related protein; PFAM: GPW/gp25 family protein YP_005279330.1 KEGG: eok:G2583_0236 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0110 family; PFAM: protein of unknown function DUF879 YP_005279331.1 KEGG: eoh:ECO103_0223 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0111 family; PFAM: protein of unknown function DUF1305 YP_005279332.1 TIGRFAM: type VI secretion system FHA domain protein; KEGG: eoh:ECO103_0222 hypothetical protein YP_005279333.1 TIGRFAM: type VI secretion lipoprotein, VC_A0113 family; KEGG: eoh:ECO103_0221 putative lipoprotein YP_005279334.1 KEGG: eoi:ECO111_0225 hypothetical protein; TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876 YP_005279335.1 KEGG: eoj:ECO26_0225 hypothetical protein; TIGRFAM: type IV / VI secretion system protein, DotU family; PFAM: Type IV / VI secretion system, DotU YP_005279336.1 TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; KEGG: eoi:ECO111_0223 putative ATP-dependent Clp proteinase ATP-binding chain; SMART: AAA ATPase YP_005279337.1 TIGRFAM: type VI secretion-associated protein, VC_A0118 family; KEGG: eoi:ECO111_0222 hypothetical protein YP_005279338.1 KEGG: eoh:ECO103_0216 hypothetical protein; TIGRFAM: type VI secretion-associated protein, VC_A0119 family; PFAM: ImpA domain protein YP_005279339.1 KEGG: eoj:ECO26_0220 IcmF-like protein; TIGRFAM: type VI secretion protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215 YP_005279340.1 PFAM: ImpA domain protein; KEGG: eoh:ECO103_0214 hypothetical protein YP_005279341.1 KEGG: ssn:SSON_0233 Hcp-like protein; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796 YP_005279342.1 KEGG: eoh:ECO103_0212 hypothetical protein YP_005279343.1 KEGG: eoh:ECO103_0211 hypothetical protein YP_005279344.1 KEGG: eoh:ECO103_0210 putative aminopeptidase YP_005279345.1 SMART: Exonuclease; TIGRFAM: DNA polymerase III, epsilon subunit; KEGG: ebd:ECBD_3409 DNA polymerase III subunit epsilon; PFAM: Exonuclease RNase T and DNA polymerase III YP_005279346.1 KEGG: sdy:SDY_0233 ribonuclease H; PFAM: ribonuclease H YP_005279347.1 PFAM: Methyltransferase type 11; KEGG: eoh:ECO103_0207 putative S-adenosyl-L-methionine-dependent methyltransferase YP_005279348.1 KEGG: eok:G2583_0216 hydroxyacylglutathione hydrolase; TIGRFAM: hydroxyacylglutathione hydrolase YP_005279349.1 manually curated; PFAM: MLTD_N domain protein; Lytic transglycosylase catalytic; Peptidoglycan-binding lysin domain; KEGG: ssn:SSON_0225 membrane-bound lytic murein transglycosylase D; SMART: Peptidoglycan-binding LysM YP_005279350.1 PFAM: Methyltransferase type 11; KEGG: eoi:ECO111_0207 putative S-adenosyl-L-methionine-dependent methyltransferase YP_005279351.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: sbc:SbBS512_E0205 hypothetical protein YP_005279352.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ssn:SSON_0222 putative transcriptional regulator LysR-type YP_005279353.1 PFAM: aldo/keto reductase; KEGG: ssn:SSON_0221 2,5-diketo-D-gluconate reductase B YP_005279354.1 KEGG: ssn:SSON_0214 D,D-heptose 1,7-bisphosphate phosphatase; TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Haloacid dehalogenase domain protein hydrolase YP_005279355.1 TIGRFAM: D-methionine ABC transporter, ATPase subunit; PFAM: ABC transporter related; NIL domain; KEGG: sbc:SbBS512_E0193 DL-methionine transporter ATP-binding subunit; SMART: AAA ATPase YP_005279356.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sbo:SBO_0187 DL-methionine transporter permease subunit YP_005279357.1 KEGG: sbc:SbBS512_E0191 DL-methionine transporter substrate-binding subunit; TIGRFAM: lipoprotein, YaeC family; PFAM: NLPA lipoprotein YP_005279358.1 KEGG: sdy:SDY_0215 outer membrane lipoprotein YP_005279359.1 PFAM: Uncharacterised protein family UPF0066; KEGG: ssn:SSON_0209 hypothetical protein YP_005279360.1 KEGG: sbc:SbBS512_E0188 prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; Anticodon-binding domain protein YP_005279361.1 KEGG: ebw:BWG_0186 hypothetical protein YP_005279362.1 KEGG: ssn:SSON_0206 lipoprotein involved with copper homeostasis and adhesion YP_005279363.1 PFAM: Class I peptide chain release factor; KEGG: sbc:SbBS512_E0185 peptidyl-tRNA hydrolase domain protein YP_005279364.1 PFAM: YaeQ family protein; KEGG: sbc:SbBS512_E0184 hypothetical protein YP_005279365.1 PFAM: protein of unknown function UPF0253; KEGG: sdy:SDY_0208 hypothetical protein YP_005279366.1 PFAM: Modulator of Rho-dependent transcription termination; KEGG: sdy:SDY_0207 Rho-binding antiterminator YP_005279367.1 KEGG: sbc:SbBS512_E0181 tRNA(Ile)-lysidine synthetase; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; Protein of unkown function DUF1946 PP-loop ATpase YP_005279368.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sbc:SbBS512_E0180 hypothetical protein YP_005279369.1 KEGG: eoi:ECO111_0187 lysine decarboxylase 2, constitutive; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein YP_005279370.1 KEGG: sdy:SDY_0201 acetyl-CoA carboxylase carboxyltransferase subunit alpha; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region YP_005279371.1 SMART: phosphoesterase PHP domain protein; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: eoh:ECO103_0182 DNA polymerase III subunit alpha; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type YP_005279372.1 KEGG: ssn:SSON_0195 ribonuclease HII; PFAM: ribonuclease HII/HIII YP_005279373.1 TIGRFAM: lipid-A-disaccharide synthase; KEGG: eoh:ECO103_0180 lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19 YP_005279374.1 TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: sdy:SDY_0197 UDP-N-acetylglucosamine acyltransferase; PFAM: transferase hexapeptide repeat containing protein YP_005279375.1 KEGG: sfv:SFV_0163 (3R)-hydroxymyristoyl-ACP dehydratase; TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ YP_005279376.1 KEGG: sdy:SDY_0195 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; transferase hexapeptide repeat containing protein YP_005279377.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: sdy:SDY_0194 periplasmic chaperone YP_005279378.1 KEGG: sbc:SbBS512_E0170 outer membrane protein assembly factor YaeT; TIGRFAM: outer membrane protein assembly complex, YaeT protein; PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein YP_005279379.1 TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; KEGG: sfv:SFV_0159 zinc metallopeptidase RseP; SMART: PDZ/DHR/GLGF domain protein YP_005279380.1 KEGG: sbc:SbBS512_E0168 CDP-diglyceride synthase; manually curated; PFAM: phosphatidate cytidylyltransferase YP_005279381.1 TIGRFAM: undecaprenyl diphosphate synthase; KEGG: sdy:SDY_0190 undecaprenyl pyrophosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase YP_005279382.1 TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: sbc:SbBS512_E0166 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain-containing protein YP_005279383.1 KEGG: sdy:SDY_0188 ribosome recycling factor; TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor YP_005279384.1 KEGG: sbc:SbBS512_E0164 uridylate kinase; TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_005279385.1 KEGG: sdy:SDY_0186 elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein YP_005279386.1 KEGG: sbc:SbBS512_E0162 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2 YP_005279387.1 KEGG: sdy:SDY_0184 methionine aminopeptidase; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24 YP_005279388.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: protein-P-II uridylyltransferase; KEGG: eoj:ECO26_0169 PII uridylyl-transferase; PFAM: GlnD PII-uridylyltransferase; DNA polymerase beta domain protein region; metal-dependent phosphohydrolase HD sub domain; amino acid-binding ACT domain protein YP_005279389.1 TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; KEGG: ssn:SSON_0178 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_005279390.1 KEGG: sdy:SDY_0181 hypothetical protein YP_005279391.1 PFAM: sugar diacid recognition domain protein; KEGG: ssn:SSON_0175 carbohydrate diacid transcriptional activator CdaR YP_005279392.1 SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: protease Do; KEGG: sbc:SbBS512_E0154 serine endoprotease; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein YP_005279393.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; KEGG: sfv:SFV_0145 deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain YP_005279394.1 TIGRFAM: MTA/SAH nucleosidase; KEGG: sdy:SDY_0175 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; PFAM: purine or other phosphorylase family 1 YP_005279395.1 PFAM: periplasmic binding protein; KEGG: ssn:SSON_0170 vitamin B12-transporter protein BtuF YP_005279396.1 PFAM: Uncharacterised protein family UPF0126; KEGG: sbc:SbBS512_E0149 hypothetical protein YP_005279397.1 KEGG: sdy:SDY_0172 iron-sulfur cluster insertion protein ErpA; TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein YP_005279398.1 PFAM: Cl- channel voltage-gated family protein; KEGG: ssn:SSON_0167 chloride channel protein YP_005279399.1 KEGG: ebd:ECBD_3464 glutamate-1-semialdehyde aminotransferase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III YP_005279400.1 PFAM: transport system permease protein; KEGG: eoj:ECO26_0156 iron-hydroxamate transporter permease subunit YP_005279401.1 PFAM: periplasmic binding protein; KEGG: eoh:ECO103_0152 iron-hydroxamate transporter substrate-binding subunit YP_005279402.1 KEGG: ebw:BWG_0144 iron-hydroxamate transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_005279403.1 KEGG: eoh:ECO103_0150 ferrichrome outer membrane transporter; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug YP_005279404.1 TIGRFAM: penicillin-binding protein 1B; KEGG: sfv:SFV_0134 penicillin-binding protein 1B; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_005279405.1 TIGRFAM: ATP-dependent helicase HrpB; PFAM: Helicase ATP-dependent domain protein; helicase domain protein; helicase-associated domain protein; KEGG: ebw:BWG_0141 ATP-dependent RNA helicase HrpB; SMART: DEAD-like helicase ; helicase domain protein YP_005279406.1 KEGG: ssn:SSON_0159 hypothetical protein; TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX YP_005279407.1 KEGG: eok:G2583_0150 sugar fermentation stimulation protein A; TIGRFAM: sugar fermentation stimulation protein; PFAM: sugar fermentation stimulation protein YP_005279408.1 TIGRFAM: RNA polymerase-binding protein DksA; KEGG: ctu:Ctu_07760 RNA polymerase-binding transcription factor YP_005279409.1 PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; KEGG: eoi:ECO111_0146 glutamyl-Q tRNA(Asp) synthetase YP_005279410.1 manually curated; TIGRFAM: poly(A) polymerase; KEGG: sbo:SBO_0132 poly(A) polymerase I; PFAM: Polynucleotide adenylyltransferase region YP_005279411.1 TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; KEGG: ebd:ECBD_3477 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK YP_005279412.1 PFAM: Fimbrial protein domain-containing protein; KEGG: ssn:SSON_0153 putative fimbrial-like protein YP_005279413.1 PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: ebd:ECBD_3479 putative chaperone protein EcpD YP_005279414.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: eoj:ECO26_0142 putative outer membrane usher protein YP_005279415.1 KEGG: ebd:ECBD_3481 putative fimbrial-like adhesin exported protein YP_005279416.1 PFAM: Fimbrial protein domain-containing protein; KEGG: ebd:ECBD_3482 fimbrial protein YP_005279417.1 KEGG: ssn:SSON_0145 putative fimbrial protein YP_005279418.1 PFAM: Fimbrial protein domain-containing protein; KEGG: ebd:ECBD_3484 putative fimbrial-like adhesin protein YP_005279419.1 TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; KEGG: eoh:ECO103_0134 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase YP_005279420.1 KEGG: eoh:ECO103_0133 pantoate--beta-alanine ligase; TIGRFAM: pantoate/beta-alanine ligase; cytidyltransferase-related domain protein; PFAM: Pantoate-beta-alanine ligase YP_005279421.1 PFAM: transposase YhgA family protein; KEGG: ssn:SSON_0140 hypothetical protein YP_005279422.1 TIGRFAM: aspartate 1-decarboxylase; KEGG: sdy:SDY_0041 aspartate alpha-decarboxylase; PFAM: aspartate decarboxylase YP_005279423.1 PFAM: polysaccharide deacetylase; KEGG: eoh:ECO103_0130 putative polysaccharide deacetylase lipoprotein YP_005279424.1 PFAM: PTS system fructose subfamily IIA component; KEGG: eoi:ECO111_0130 putative PTS enzyme IIA YP_005279425.1 PFAM: ABC-2 type transporter; KEGG: sdy:SDY_0037 hypothetical protein YP_005279426.1 KEGG: ssn:SSON_0135 putative ATP-binding component of a transport system; PFAM: ABC transporter related; SMART: AAA ATPase YP_005279427.1 KEGG: ssn:SSON_0134 carbonic anhydrase; PFAM: carbonic anhydrase YP_005279428.1 TIGRFAM: hypoxanthine phosphoribosyltransferase; KEGG: sdy:SDY_0034 hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_005279429.1 SMART: Pyrrolo-quinoline quinone beta-propeller repeat; TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; KEGG: ebw:BWG_0117 glucose dehydrogenase; PFAM: PQQ-dependent enzyme-like; Pyrrolo-quinoline quinone repeat-containing protein YP_005279430.1 PFAM: multicopper oxidase type 3; multicopper oxidase type 2; KEGG: ebw:BWG_0116 multicopper oxidase YP_005279431.1 KEGG: sdy:SDY_0029 hypothetical protein YP_005279432.1 KEGG: ebd:ECBD_3498 spermidine synthase; TIGRFAM: spermidine synthase; PFAM: Spermine synthase YP_005279433.1 TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; KEGG: sbc:SbBS512_E0113 S-adenosylmethionine decarboxylase; PFAM: S-adenosylmethionine decarboxylase related YP_005279434.1 PFAM: Uncharacterised conserved protein UCP006287; KEGG: sdy:SDY_0026 hypothetical protein YP_005279435.1 KEGG: sbo:SBO_0107 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; TIGRFAM: aconitate hydratase 2; PFAM: Aconitase B; aconitate hydratase domain-containing protein YP_005279436.1 KEGG: ssn:SSON_0125 hypothetical protein YP_005279437.1 KEGG: sbc:SbBS512_E0109 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_005279438.1 TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; KEGG: sbc:SbBS512_E0108 dihydrolipoamide acetyltransferase; PFAM: catalytic domain-containing protein of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein YP_005279439.1 KEGG: eok:G2583_0118 pyruvate dehydrogenase E1 component; TIGRFAM: 2-oxo-acid dehydrogenase E1 subunit, homodimeric type; PFAM: Transketolase domain-containing protein YP_005279440.1 KEGG: sbc:SbBS512_E0106 transcriptional regulator PdhR; PFAM: regulatory protein GntR HTH; GntR domain protein; SMART: regulatory protein GntR HTH YP_005279441.1 PFAM: amino acid permease-associated region; KEGG: efe:EFER_0132 aromatic amino acid transporter YP_005279442.1 KEGG: ssn:SSON_0119 regulatory protein AmpE YP_005279443.1 KEGG: ebd:ECBD_3509 N-acetyl-anhydromuranmyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: N-acetylmuramoyl-L-alanine amidase family 2 YP_005279444.1 TIGRFAM: nicotinate-nucleotide pyrophosphorylase; KEGG: ebd:ECBD_3510 quinolinate phosphoribosyltransferase; PFAM: Quinolinate phosphoribosyl transferase YP_005279445.1 KEGG: ebd:ECBD_3511 putative major pilin subunit YP_005279446.1 PFAM: type II secretion system protein E; KEGG: ebd:ECBD_3512 hypothetical protein YP_005279447.1 PFAM: Type II secretion system F domain; KEGG: sbc:SbBS512_E0098 type IV pilin biogenesis protein YP_005279448.1 KEGG: ssn:SSON_0112 guanosine 5'-monophosphate oxidoreductase; TIGRFAM: guanosine monophosphate reductase; PFAM: IMP dehydrogenase/GMP reductase YP_005279449.1 TIGRFAM: dephospho-CoA kinase; KEGG: sdy:SDY_0133 dephospho-CoA kinase; PFAM: Dephospho-CoA kinase YP_005279450.1 PFAM: protein of unknown function DUF1342; KEGG: ssn:SSON_0110 hypothetical protein YP_005279451.1 PFAM: protein of unknown function DUF329; KEGG: sdy:SDY_0131 zinc-binding protein YP_005279452.1 KEGG: ssn:SSON_0107 nucleoside triphosphate pyrophosphohydrolase; TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase YP_005279453.1 KEGG: sbc:SbBS512_E0092 preprotein translocase subunit SecA; TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; SecA Wing and Scaffold; SEC-C motif domain protein YP_005279454.1 KEGG: eok:G2583_0101 secretion monitor protein; manually curated; PFAM: secretion monitor family proten YP_005279455.1 KEGG: sdy:SDY_0126 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase YP_005279456.1 KEGG: sdy:SDY_0125 cell division protein FtsZ; TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain YP_005279457.1 KEGG: sdy:SDY_0124 cell division protein FtsA; TIGRFAM: cell division protein FtsA; PFAM: cell division protein FtsA YP_005279458.1 PFAM: cell division protein FtsQ; Polypeptide-transport-associated domain protein FtsQ-type; KEGG: sbc:SbBS512_E0086 cell division protein FtsQ YP_005279459.1 TIGRFAM: D-alanine/D-alanine ligase; KEGG: ssn:SSON_0100 D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein YP_005279460.1 KEGG: ebd:ECBD_3526 UDP-N-acetylmuramate--L-alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein YP_005279461.1 KEGG: sbo:SBO_0078 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain YP_005279462.1 KEGG: sdy:SDY_0119 cell division protein FtsW; TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein YP_005279463.1 KEGG: sbo:SBO_0076 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_005279464.1 KEGG: sbc:SbBS512_E0080 phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site YP_005279465.1 KEGG: sbc:SbBS512_E0079 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_005279466.1 KEGG: eoh:ECO103_0087 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_005279467.1 KEGG: sdy:SDY_0114 penicillin-binding protein 3; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_005279468.1 KEGG: sdy:SDY_0113 cell division protein FtsL; TIGRFAM: cell division protein FtsL; PFAM: cell division protein FtsL YP_005279469.1 KEGG: sbc:SbBS512_E0075 S-adenosyl-methyltransferase MraW; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase YP_005279470.1 KEGG: sbc:SbBS512_E0074 cell division protein MraZ; TIGRFAM: MraZ protein; PFAM: MraZ domain YP_005279471.1 TIGRFAM: D-fructose-responsive transcription factor; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sbc:SbBS512_E0073 DNA-binding transcriptional regulator FruR; SMART: regulatory protein LacI YP_005279472.1 manually curated; KEGG: eok:G2583_0083 FruR leader peptide YP_005279473.1 TIGRFAM: acetolactate synthase, small subunit; KEGG: sfv:SFV_0069 acetolactate synthase 3 regulatory subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein YP_005279474.1 KEGG: ssn:SSON_0084 acetolactate synthase 3 catalytic subunit; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein YP_005279475.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ssn:SSON_0083 leucine transcriptional activator YP_005279476.1 KEGG: sbc:SbBS512_E0068 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain-containing protein YP_005279477.1 TIGRFAM: 3-isopropylmalate dehydrogenase; KEGG: ebd:ECBD_3543 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_005279478.1 KEGG: sbc:SbBS512_E0066 isopropylmalate isomerase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain-containing protein YP_005279479.1 KEGG: sbc:SbBS512_E0065 isopropylmalate isomerase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain-containing protein YP_005279480.1 KEGG: eoh:ECO103_0072 broad specificity sugar efflux system SetA; TIGRFAM: sugar efflux transporter; PFAM: major facilitator superfamily MFS_1 YP_005279481.1 KEGG: ebd:ECBD_3547 hypothetical protein YP_005279482.1 PFAM: extracellular solute-binding protein family 5; KEGG: sbc:SbBS512_E0062 transcriptional regulator SgrR YP_005279483.1 KEGG: eoh:ECO103_0069 thiamine transporter substrate binding subunit; TIGRFAM: thiamine ABC transporter, periplasmic binding protein; ABC transporter, periplasmic binding protein, thiB subfamily; PFAM: extracellular solute-binding protein family 1 YP_005279484.1 KEGG: sfx:S0064 thiamine transporter membrane protein; TIGRFAM: thiamine ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_005279485.1 TIGRFAM: ABC transporter, ATPase subunit, ThiQ subfamily; PFAM: ABC transporter related; KEGG: ssn:SSON_0072 thiamine transporter ATP-binding subunit; SMART: AAA ATPase YP_005279486.1 PFAM: SNARE associated Golgi protein; KEGG: sbo:SBO_0052 hypothetical protein YP_005279487.1 KEGG: sbo:SBO_0051 DNA-binding transcriptional regulator AraC; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_005279488.1 KEGG: ebd:ECBD_3554 ribulokinase; TIGRFAM: L-ribulokinase; PFAM: Carbohydrate kinase, FGGY-like YP_005279489.1 KEGG: sbo:SBO_0049 L-arabinose isomerase; PFAM: L-arabinose isomerase YP_005279490.1 KEGG: ssn:SSON_0067 L-ribulose-5-phosphate 4-epimerase; TIGRFAM: L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein YP_005279491.1 KEGG: eoh:ECO103_0061 DNA polymerase II; PFAM: DNA polymerase B region; DNA polymerase B exonuclease; SMART: DNA-directed DNA polymerase B YP_005279492.1 KEGG: ebd:ECBD_3558 ATP-dependent helicase HepA; PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_005279493.1 PFAM: pseudouridine synthase; KEGG: sdy:SDY_0082 23S rRNA/tRNA pseudouridine synthase A YP_005279494.1 manually curated; PFAM: heat shock protein DnaJ domain protein; KEGG: sdy:SDY_0080 Dna-J like membrane chaperone protein; SMART: heat shock protein DnaJ domain protein YP_005279495.1 PFAM: Organic solvent tolerance protein; OstA family protein; KEGG: ebd:ECBD_3561 organic solvent tolerance protein YP_005279496.1 PFAM: SurA domain; PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: sbo:SBO_0042 peptidyl-prolyl cis-trans isomerase SurA YP_005279497.1 TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; KEGG: eok:G2583_0056 4-hydroxythreonine-4-phosphate dehydrogenase (4-(phosphohydroxy)-L-threonine dehydrogenase); PFAM: Pyridoxal phosphate biosynthetic protein PdxA YP_005279498.1 TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; KEGG: sbo:SBO_0040 dimethyladenosine transferase; SMART: Ribosomal RNA adenine methylase transferase-like YP_005279499.1 PFAM: ApaG domain protein; KEGG: sdy:SDY_0075 ApaG YP_005279500.1 KEGG: sfv:SFV_0043 diadenosine tetraphosphatase; TIGRFAM: bis(5'-nucleosyl)-tetraphosphatase (symmetrical); PFAM: metallophosphoesterase YP_005279501.1 manually curated; KEGG: sbc:SbBS512_E0042 dihydrofolate reductase; PFAM: dihydrofolate reductase region YP_005279502.1 KEGG: sbc:SbBS512_E0041 glutathione-regulated potassium-efflux system protein KefC; TIGRFAM: potassium efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein YP_005279503.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: ebd:ECBD_3569 glutathione-regulated potassium-efflux system ancillary protein KefF YP_005279504.1 PFAM: major facilitator superfamily MFS_1; KEGG: ebd:ECBD_3570 major facilitator superfamily MFS_1 YP_005279505.1 KEGG: sdy:SDY_0066 putative ferredoxin YP_005279506.1 PFAM: FAD dependent oxidoreductase; KEGG: ebd:ECBD_3572 putative oxidoreductase FixC YP_005279507.1 PFAM: Electron transfer flavoprotein alpha subunit ; Electron transfer flavoprotein alpha/beta-subunit; KEGG: ssn:SSON_0050 putative electron transfer flavoprotein FixB YP_005279508.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: sfv:SFV_0035 putative electron transfer flavoprotein FixA YP_005279509.1 KEGG: ssn:SSON_0048 L-carnitine/gamma-butyrobetaine antiporter; TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter YP_005279510.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: sdy:SDY_0061 crotonobetainyl-CoA dehydrogenase YP_005279511.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: sfx:S0037 crotonobetainyl-CoA:carnitine CoA-transferase YP_005279512.1 PFAM: AMP-dependent synthetase and ligase; KEGG: eoi:ECO111_0038 putative crotonobetaine/carnitine-CoA ligase YP_005279513.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: eoi:ECO111_0037 carnitinyl-CoA dehydratase YP_005279514.1 KEGG: ssn:SSON_0041 carnitine operon protein CaiE YP_005279515.1 KEGG: eoh:ECO103_0036 DNA-binding transcriptional activator CaiF YP_005279516.1 KEGG: eoh:ECO103_0035 hypothetical protein YP_005279517.1 KEGG: sbo:SBO_0032 carbamoyl phosphate synthase large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein YP_005279518.1 KEGG: sbc:SbBS512_E0036 carbamoyl phosphate synthase small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I YP_005279519.1 KEGG: enc:ECL_00838 hypothetical protein; TIGRFAM: dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase YP_005279520.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: eoh:ECO103_0031 ribonucleoside hydrolase RihC YP_005279521.1 TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; KEGG: sdy:SDY_0051 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; PFAM: LytB protein YP_005279522.1 KEGG: sbc:SbBS512_E0032 FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase; PFAM: peptidylprolyl isomerase FKBP-type YP_005279523.1 TIGRFAM: lipoprotein signal peptidase; KEGG: sdy:SDY_0049 lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II YP_005279524.1 KEGG: ssn:SSON_0031 isoleucyl-tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase YP_005279525.1 TIGRFAM: riboflavin biosynthesis protein RibF; KEGG: sbc:SbBS512_E0029 bifunctional riboflavin kinase/FMN adenylyltransferase; PFAM: FAD synthetase; Riboflavin kinase YP_005279526.1 manually curated; KEGG: sbc:SbBS512_E0028 hypothetical protein YP_005279527.1 KEGG: sdy:SDY_0045 30S ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20 YP_005279528.1 KEGG: ebd:ECBD_3598 hypothetical protein YP_005279529.1 PFAM: regulatory protein LysR; KEGG: sbc:SbBS512_E0020 transcriptional activator NhaR YP_005279530.1 KEGG: ebd:ECBD_3600 pH-dependent sodium/proton antiporter; TIGRFAM: Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter NhaA YP_005279531.1 PFAM: Hok/gef cell toxic protein; KEGG: sbo:SBO_0017 Gef YP_005279532.1 TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; DnaJ central domain protein; heat shock protein DnaJ domain protein; KEGG: ssn:SSON_0015 chaperone protein DnaJ; SMART: heat shock protein DnaJ domain protein YP_005279533.1 KEGG: sdy:SDY_0013 molecular chaperone DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70 YP_005279534.1 KEGG: eoh:ECO103_0013 hypothetical protein YP_005279535.1 KEGG: eoi:ECO111_0011 hypothetical protein YP_005279536.1 PFAM: GPR1/FUN34/yaaH family protein; KEGG: ssn:SSON_0011 hypothetical protein YP_005279537.1 KEGG: sbc:SbBS512_E0009 molybdenum cofactor biosynthesis protein MogA; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain YP_005279538.1 KEGG: sbc:SbBS512_E0008 transaldolase B; TIGRFAM: transaldolase; PFAM: Transaldolase YP_005279539.1 KEGG: eoh:ECO103_0008 putative transporter; TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter YP_005279540.1 PFAM: protein of unknown function DUF328; KEGG: ebd:ECBD_3612 hypothetical protein YP_005279541.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: eoh:ECO103_4940 putative IS621 transposase YP_005279542.1 PFAM: Protein of unknown function DUF2502; KEGG: ssn:SSON_0005 hypothetical protein YP_005279543.1 TIGRFAM: threonine synthase; KEGG: sdy:SDY_0004 threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_005279544.1 KEGG: sdy:SDY_0003 homoserine kinase; TIGRFAM: homoserine kinase; PFAM: GHMP kinase; GHMP kinase domain protein YP_005279545.1 KEGG: ebd:ECBD_3616 bifunctional aspartokinase I/homeserine dehydrogenase I; TIGRFAM: aspartate kinase; PFAM: homoserine dehydrogenase; aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding YP_005279546.1 KEGG: sfl:SF4434 putative RNA methyltransferase; TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU) YP_005279547.1 KEGG: sdy:SDY_4662 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_005279548.1 PFAM: Inner membrane CreD family protein; KEGG: ebd:ECBD_3620 hypothetical protein YP_005279549.1 KEGG: eoh:ECO103_5260 sensory histidine kinase CreC; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_005279550.1 KEGG: eoi:ECO111_5259 DNA-binding response regulator CreB; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_005279551.1 PFAM: CreA family protein; KEGG: sdy:SDY_4658 hypothetical protein YP_005279552.1 KEGG: sbc:SbBS512_E4943 right origin-binding protein; PFAM: transcription activator effector binding; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_005279553.1 PFAM: Phosphoglycerate mutase; KEGG: ssn:SSON_4545 phosphoglycerate mutase YP_005279554.1 PFAM: protein of unknown function DUF84; KEGG: ebd:ECBD_3626 NTPase YP_005279555.1 manually curated; TIGRFAM: trp operon repressor; KEGG: sdy:SDY_4654 Trp operon repressor; PFAM: Trp repressor YP_005279556.1 PFAM: Lytic transglycosylase catalytic; KEGG: sbo:SBO_4455 lytic murein transglycosylase YP_005279557.1 KEGG: sdy:SDY_4652 putative ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_005279558.1 manually curated; KEGG: sbc:SbBS512_E4938 hypothetical protein YP_005279559.1 TIGRFAM: nicotinamide-nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: helix-turn-helix domain protein; KEGG: sbc:SbBS512_E4937 nicotinamide-nucleotide adenylyltransferase; SMART: helix-turn-helix domain protein YP_005279560.1 KEGG: sdy:SDY_4650 DNA repair protein RadA; TIGRFAM: DNA repair protein RadA; SMART: AAA ATPase YP_005279561.1 PFAM: Haloacid dehalogenase domain protein hydrolase; manually curated; KEGG: sbc:SbBS512_E4935 phosphoserine phosphatase; TIGRFAM: phosphoserine phosphatase SerB; HAD-superfamily hydrolase, subfamily IB (PSPase-like) YP_005279562.1 PFAM: Virulence factor, haemolysin regulator; KEGG: sbo:SBO_4450 hypothetical protein YP_005279563.1 KEGG: eoh:ECO103_5247 lipoate-protein ligase A; TIGRFAM: lipoyltransferase and lipoate-protein ligase; PFAM: biotin/lipoate A/B protein ligase; Lipoate protein ligase-like YP_005279564.1 KEGG: sbc:SbBS512_E4931 purine nucleoside phosphorylase; TIGRFAM: purine nucleoside phosphorylase; PFAM: purine or other phosphorylase family 1 YP_005279565.1 TIGRFAM: phosphopentomutase; KEGG: sbc:SbBS512_E4930 phosphopentomutase; PFAM: metalloenzyme domain protein YP_005279566.1 TIGRFAM: thymidine phosphorylase; pyrimidine-nucleoside phosphorylase; KEGG: sbc:SbBS512_E4929 thymidine phosphorylase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; Pyrimidine nucleoside phosphorylase domain YP_005279567.1 TIGRFAM: deoxyribose-phosphate aldolase; KEGG: sdy:SDY_4641 deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_005279568.1 KEGG: ebw:BWG_4072 hypothetical protein YP_005279569.1 PFAM: Radical SAM domain protein; KEGG: ssn:SSON_4530 putative activating enzyme YP_005279570.1 PFAM: TatD-related deoxyribonuclease; KEGG: eoj:ECO26_5584 putative deoxyribonuclease YjjV YP_005279571.1 PFAM: Patatin; KEGG: ssn:SSON_4528 hypothetical protein YP_005279572.1 PFAM: protein of unknown function DUF1328; KEGG: cro:ROD_48991 hypothetical protein YP_005279573.1 KEGG: ssn:SSON_4526 periplasmic protein; PFAM: transport-associated; SMART: Transport-associated and nodulation region YP_005279574.1 KEGG: sbc:SbBS512_E4918 peptide chain release factor 3; TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein YP_005279575.1 KEGG: eoh:ECO103_5158 nucleotidase; TIGRFAM: HAD superfamily (subfamily IA) hydrolase, TIGR02254; HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_005279576.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; KEGG: ssn:SSON_4523 ribosomal-protein-alanine N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_005279577.1 TIGRFAM: DNA polymerase III, psi subunit; KEGG: sdy:SDY_4631 DNA polymerase III subunit psi; PFAM: DNA polymerase III psi subunit YP_005279578.1 KEGG: ssn:SSON_4521 16S ribosomal RNA m2G1207 methyltransferase; PFAM: Methyltransferase small domain protein; methyltransferase small YP_005279579.1 PFAM: protein of unknown function DUF1435; KEGG: eoi:ECO111_5229 hypothetical protein YP_005279580.1 KEGG: eoi:ECO111_5228 ferric iron reductase involved in ferric hydroximate transport YP_005279581.1 KEGG: eok:G2583_5168 transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_005279582.1 KEGG: eoi:ECO111_5226 putative DNA-binding transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_005279583.1 KEGG: sbc:SbBS512_E4904 hypothetical protein; manually curated; PFAM: protein of unknown function DUF1212 YP_005279584.1 KEGG: eoi:ECO111_5224 hypothetical protein YP_005279585.1 KEGG: sbc:SbBS512_E4902 primosomal protein DnaI YP_005279586.1 SMART: AAA ATPase; KEGG: sbc:SbBS512_E4901 DNA replication protein DnaC YP_005279587.1 PFAM: Protein of unknown function DUF2501; KEGG: eoh:ECO103_5144 hypothetical protein YP_005279588.1 KEGG: ssn:SSON_4505 phosphoglycerol transferase I; PFAM: sulfatase YP_005279589.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: ssn:SSON_4504 putative oxidoreductase YP_005279590.1 PFAM: GntR domain protein; regulatory protein GntR HTH; KEGG: eok:G2583_5159 transcriptional regulator, GntR family YP_005279591.1 PFAM: major facilitator superfamily MFS_1; KEGG: eoh:ECO103_5140 putative transporter YP_005279592.1 KEGG: eok:G2583_5157 methyl-accepting chemotaxis protein I; PFAM: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; ligand binding Tar domain protein; histidine kinase HAMP region domain protein YP_005279593.1 SMART: regulatory protein MarR; manually curated; KEGG: sfv:SFV_4385 regulator of the 4HPA-hydroxylase operon; TIGRFAM: homoprotocatechuate degradation operon regulator, HpaR; PFAM: regulatory protein MarR YP_005279594.1 TIGRFAM: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG1 subunit; KEGG: sfv:SFV_4384 5-oxo-1,2,5-tricarboxilic-3-penten acid decarboxilase/isomerase; PFAM: fumarylacetoacetate (FAA) hydrolase YP_005279595.1 KEGG: sbc:SbBS512_E4889 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; TIGRFAM: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase YP_005279596.1 TIGRFAM: 3,4-dihydroxyphenylacetate 2,3-dioxygenase; KEGG: sbc:SbBS512_E4888 3,4-dihydroxyphenylacetate 2,3-dioxygenase; PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B YP_005279597.1 KEGG: sbc:SbBS512_E4887 5-carboxymethyl-2-hydroxymuconate delta isomerase; PFAM: 5-carboxymethyl-2-hydroxymuconate isomerase YP_005279598.1 TIGRFAM: 2-oxo-hepta-3-ene-1,7-dioic acid hydratase; KEGG: ssn:SSON_4495 2-oxo-hept-3-ene-1,7-dioate hydratase; PFAM: fumarylacetoacetate (FAA) hydrolase YP_005279599.1 TIGRFAM: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; KEGG: eoi:ECO111_5209 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PFAM: HpcH/HpaI aldolase YP_005279600.1 KEGG: sbo:SBO_4406 putative 4-hydroxyphenylacetate permease; TIGRFAM: 4-hydroxyphenylacetate transporter; PFAM: major facilitator superfamily MFS_1 YP_005279601.1 TIGRFAM: 4-hydroxyphenylacetate catabolism regulatory protein HpaA; PFAM: helix-turn-helix- domain containing protein AraC type; Cupin 2 conserved barrel domain protein; KEGG: ebd:ECBD_3673 transcriptional regulator, AraC family; SMART: Helix-turn-helix, AraC domain YP_005279602.1 KEGG: efe:EFER_3070 4-hydroxyphenylacetate 3-monooxygenase large component; TIGRFAM: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase subunit; PFAM: 4-hydroxyphenylacetate 3-hydroxylase YP_005279603.1 KEGG: sbc:SbBS512_E4881 4-hydroxyphenylacetate 3-monooxygenase, reductase component; TIGRFAM: 4-hydroxyphenylacetate 3-monooxygenase, reductase subunit; PFAM: flavin reductase domain protein FMN-binding YP_005279604.1 PFAM: carbon starvation protein CstA; KEGG: sbc:SbBS512_E4880 carbon starvation family protein YP_005279605.1 PFAM: protein of unknown function DUF466; KEGG: sdy:SDY_4606 hypothetical protein YP_005279606.1 PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: eoh:ECO103_5124 putative GTP-binding protein YjiA YP_005279607.1 KEGG: eoh:ECO103_5123 penicillin G acylase precursor; PFAM: peptidase S45 penicillin amidase YP_005279608.1 KEGG: eoh:ECO103_5122 hypothetical protein YP_005279609.1 KEGG: eoh:ECO103_5121 fused putative DNA-binding transcriptional regulator/putative amino transferase; PFAM: aminotransferase class I and II; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_005279610.1 PFAM: transposase YhgA family protein; KEGG: eoj:ECO26_5535 hypothetical protein YP_005279611.1 PFAM: major facilitator superfamily MFS_1; KEGG: eoi:ECO111_5194 multidrug efflux system protein YP_005279612.1 PFAM: protein of unknown function DUF445; KEGG: eoh:ECO103_5118 hypothetical protein YP_005279613.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: eoj:ECO26_5532 putative 2-hydroxyglutaryl-CoA dehydratase YP_005279614.1 TIGRFAM: CoA-substrate-specific enzyme activase; KEGG: sbc:SbBS512_E4770 (R)-2-hydroxyglutaryl-CoA dehydratase activator; PFAM: ATPase BadF/BadG/BcrA/BcrD type YP_005279615.1 KEGG: eoh:ECO103_5115 hypothetical protein YP_005279616.1 PFAM: SdiA-regulated domain protein; KEGG: sbo:SBO_4384 hypothetical protein YP_005279617.1 KEGG: eoh:ECO103_5113 putative inner membrane protein YP_005279618.1 PFAM: phosphotransferase KptA/Tpt1; KEGG: eoh:ECO103_5112 RNA 2'-phosphotransferase-like protein YP_005279619.1 PFAM: nucleoside recognition domain protein; KEGG: sbc:SbBS512_E4775 putative transporter YP_005279620.1 PFAM: nucleoside recognition domain protein; KEGG: sbo:SBO_4380 hypothetical protein YP_005279621.1 KEGG: eoi:ECO111_5184 isoaspartyl dipeptidase; TIGRFAM: isoaspartyl dipeptidase; PFAM: amidohydrolase YP_005279622.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ebd:ECBD_3704 putative DNA-binding transcriptional regulator YP_005279623.1 PFAM: GPW/gp25 family protein; KEGG: eoi:ECO111_5182 DNA replication/recombination/repair protein YP_005279624.1 KEGG: eoi:ECO111_5181 hypothetical protein YP_005279625.1 manually curated; PFAM: GntR domain protein; regulatory protein GntR HTH; KEGG: sbc:SbBS512_E4789 DNA-binding transcriptional repressor UxuR; SMART: regulatory protein GntR HTH YP_005279626.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: eoi:ECO111_5179 D-mannonate oxidoreductase UxuB, NAD-binding YP_005279627.1 TIGRFAM: mannonate dehydratase; KEGG: eoh:ECO103_5103 mannonate dehydratase; PFAM: Mannonate dehydratase YP_005279628.1 KEGG: ebd:ECBD_3714 fructuronate transporter; TIGRFAM: gluconate transporter; PFAM: Gluconate transporter YP_005279629.1 PFAM: FimH mannose-binding protein; Fimbrial protein domain-containing protein; KEGG: eok:G2583_5121 adhesin YP_005279630.1 PFAM: Fimbrial protein domain-containing protein; KEGG: eok:G2583_5120 FimG YP_005279631.1 PFAM: Fimbrial protein domain-containing protein; KEGG: sbo:SBO_4368 fimbrial morphology YP_005279632.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: eoh:ECO103_5098 outer membrane usher protein FimD YP_005279633.1 PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: ebd:ECBD_3719 pili assembly chaperone, N-terminal YP_005279634.1 KEGG: ebd:ECBD_3720 fimbrial protein; manually curated; PFAM: Fimbrial protein domain-containing protein YP_005279635.1 PFAM: Fimbrial protein domain-containing protein; KEGG: eoi:ECO111_5168 major type 1 subunit fimbrin (pilin) FimA YP_005279636.1 PFAM: integrase family protein; KEGG: sfx:S4466 tyrosine recombinase YP_005279637.1 PFAM: integrase family protein; KEGG: eok:G2583_5113 type 1 fimbriae regulatory protein FimB YP_005279638.1 PFAM: Oligogalacturonate-specific porin; KEGG: ssn:SSON_4473 hypothetical protein YP_005279639.1 KEGG: eoi:ECO111_5164 N-acetylneuraminic acid mutarotase; TIGRFAM: mutatrotase, YjhT family; PFAM: Kelch repeat type 1-containing protein; Kelch repeat type 2-containing protein YP_005279640.1 PFAM: protein of unknown function DUF303 acetylesterase; KEGG: eoh:ECO103_5090 hypothetical protein YP_005279641.1 KEGG: eoi:ECO111_5162 putative restriction endonuclease YP_005279642.1 KEGG: efe:EFER_3105 putative 5-methylcytosine-specific restriction enzyme with GTPase activity; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_005279643.1 PFAM: 5-methylcytosine restriction system component-like protein; KEGG: efe:EFER_3104 putative 5-methylcytosine restriction system component YP_005279644.1 KEGG: efe:EFER_3103 hypothetical protein YP_005279645.1 PFAM: N-6 DNA methylase; KEGG: efe:EFER_3102 putative type I restriction-modification system methyltransferase subunit YP_005279646.1 KEGG: efe:EFER_3101 putative restriction modification system DNA specificity domain YP_005279647.1 KEGG: efe:EFER_3100 hypothetical protein YP_005279648.1 KEGG: efe:EFER_3099 hypothetical protein YP_005279649.1 KEGG: efe:EFER_3098 hypothetical protein YP_005279650.1 KEGG: efe:EFER_3097 hypothetical protein YP_005279651.1 PFAM: HerA-ATP synthase, barrel domain; KEGG: efe:EFER_3096 putative nucleoside triphosphate hydrolase YP_005279652.1 KEGG: efe:EFER_3095 hypothetical protein YP_005279653.1 KEGG: efe:EFER_3094 putative protein kinase from phage origin; PFAM: Serine/threonine-protein kinase-like domain; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain YP_005279654.1 PFAM: integrase family protein; KEGG: kpe:KPK_4978 site-specific recombinase, phage integrase family YP_005279655.1 PFAM: Domain of unknown function DUF1814; KEGG: pay:PAU_03952 hypothetical protein YP_005279656.1 KEGG: pay:PAU_03953 hypothetical protein YP_005279657.1 KEGG: plu:plu0136 hypothetical protein YP_005279658.1 PFAM: protein of unknown function DUF1219; KEGG: ebw:BWG_0226 CP4-6 prophage; toxin of the YkfI-YafW toxin-antitoxin system YP_005279659.1 KEGG: sfx:S3203 putative structural protein; manually curated; PFAM: YagBYeeUYfjZ family protein YP_005279660.1 KEGG: plu:plu0133 hypothetical protein; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC YP_005279661.1 KEGG: pay:PAU_03958 hypothetical protein YP_005279662.1 KEGG: sfx:S4826 hypothetical protein YP_005279663.1 KEGG: eoh:ECO103_4904 hypothetical protein YP_005279664.1 PFAM: Prophage CP4-57 regulatory; KEGG: ypy:YPK_3140 phage transcriptional regulator, AlpA YP_005279665.1 KEGG: ypy:YPK_3135 hypothetical protein YP_005279666.1 PFAM: GTP-binding protein HSR1-related; KEGG: xbo:XBJ1_1847 putative CP4-6 prophage; GTP-binding factor YP_005279667.1 KEGG: pwa:Pecwa_1387 regulatory protein DeoR YP_005279668.1 KEGG: sbc:SbBS512_E4808 type III restriction enzyme, res subunit; PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicase YP_005279669.1 PFAM: N-6 DNA methylase; KEGG: seh:SeHA_C4713 N-6 DNA methylase YP_005279670.1 KEGG: mar:MAE_56980 restriction modification system DNA specificity subunit; manually curated; PFAM: restriction modification system DNA specificity domain YP_005279671.1 KEGG: pat:Patl_3558 hypothetical protein YP_005279672.1 KEGG: pcb:PC000645.03.0 helicase YP_005279673.1 KEGG: sua:Saut_1187 5'-nucleotidase; PFAM: 5-nucleotidase YP_005279674.1 KEGG: stt:t4547 hypothetical protein YP_005279675.1 PFAM: integrase family protein; KEGG: sbc:SbBS512_E4814 site-specific recombinase, phage integrase family protein YP_005279676.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: ebw:BWG_3975 putative alcohol dehydrogenase, Zn-dependent and NAD(P)-binding YP_005279677.1 TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; KEGG: ebd:ECBD_3768 D-gluconate kinase; PFAM: shikimate kinase YP_005279678.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ebd:ECBD_3769 L-idonate 5-dehydrogenase YP_005279679.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: ebd:ECBD_3770 gluconate 5-dehydrogenase YP_005279680.1 KEGG: ebw:BWG_3971 L-idonate and D-gluconate transporter; TIGRFAM: gluconate transporter; PFAM: Gluconate transporter YP_005279681.1 KEGG: ebd:ECBD_3772 transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_005279682.1 PFAM: protein of unknown function DUF853 NPT hydrolase; KEGG: ebd:ECBD_3773 protein of unknown function DUF853 NPT hydrolase putative YP_005279683.1 PFAM: permease YjgP/YjgQ family protein; KEGG: ebd:ECBD_3774 permease YjgP/YjgQ family protein YP_005279684.1 KEGG: sbo:SBO_4179 hypothetical protein; manually curated; PFAM: permease YjgP/YjgQ family protein YP_005279685.1 KEGG: ssn:SSON_4445 leucyl aminopeptidase; PFAM: peptidase M17 leucyl aminopeptidase domain protein YP_005279686.1 manually curated; KEGG: sdy:SDY_4283 DNA polymerase III subunit chi; PFAM: DNA polymerase III chi subunit HolC YP_005279687.1 KEGG: eoh:ECO103_5054 valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase YP_005279688.1 PFAM: protein of unknown function DUF898 transmembrane; KEGG: eoh:ECO103_5053 hypothetical protein YP_005279689.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eoi:ECO111_5140 putative acetyltransferase YP_005279690.1 PFAM: protein of unknown function DUF1260; KEGG: sdy:SDY_4277 hypothetical protein YP_005279691.1 TIGRFAM: ornithine carbamoyltransferase; KEGG: sfx:S4496 ornithine carbamoyltransferase subunit I; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain YP_005279692.1 PFAM: Conserved hypothetical protein CHP00022; KEGG: eok:G2583_5082 hypothetical protein YP_005279693.1 PFAM: regulatory protein TetR; KEGG: eoh:ECO103_5046 putative transcriptional regulator YP_005279694.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: eoh:ECO103_5045 oxidoreductase YP_005279695.1 PFAM: Endoribonuclease L-PSP; KEGG: ssn:SSON_4428 hypothetical protein YP_005279696.1 KEGG: etw:ECSP_5348 pyrBI operon leader peptide; manually curated; PFAM: PyrBI operon leader peptide YP_005279697.1 KEGG: sdy:SDY_4264 aspartate carbamoyltransferase catalytic subunit; TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region YP_005279698.1 KEGG: sbc:SbBS512_E4839 aspartate carbamoyltransferase regulatory subunit; TIGRFAM: aspartate carbamoyltransferase, regulatory subunit; PFAM: Aspartate carbamoyltransferase regulatory subunit-like YP_005279699.1 KEGG: sdy:SDY_4262 hypothetical protein; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP YP_005279700.1 TIGRFAM: magnesium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; KEGG: ssn:SSON_4423 magnesium-transporting ATPase MgtA; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase YP_005279701.1 TIGRFAM: trehalose operon repressor; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: eoh:ECO103_5037 trehalose repressor; SMART: regulatory protein LacI YP_005279702.1 TIGRFAM: PTS system, trehalose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PTS system, maltose and glucose-specific subfamily, IIC subunit; KEGG: ebd:ECBD_3793 PTS system trehalose(maltose)-specific transporter subunits IIBC; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site YP_005279703.1 TIGRFAM: alpha,alpha-phosphotrehalase; PFAM: alpha amylase catalytic region; KEGG: sfx:S4513 trehalose-6-phosphate hydrolase; SMART: alpha amylase catalytic sub domain YP_005279704.1 TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; KEGG: ebd:ECBD_3796 anaerobic ribonucleoside triphosphate reductase; PFAM: formate C-acetyltransferase glycine radical; ATP-cone domain protein YP_005279705.1 TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; KEGG: ssn:SSON_4418 anaerobic ribonucleotide reductase-activating protein YP_005279706.1 PFAM: cytochrome b562; KEGG: sfv:SFV_4255 cytochrome b(562) YP_005279707.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: eok:G2583_5064 putative peptide maturation protein YP_005279708.1 PFAM: protein of unknown function DUF615; KEGG: ssn:SSON_4415 hypothetical protein YP_005279709.1 KEGG: ebd:ECBD_3801 UDP-N-acetylmuramate; TIGRFAM: UDP-N-acetylmuramate; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein YP_005279710.1 PFAM: Inositol phosphatase/fructose-16-bisphosphatase; KEGG: sdy:SDY_4250 fructose-1,6-bisphosphatase YP_005279711.1 PFAM: inner-membrane translocator; KEGG: ebd:ECBD_3803 inner membrane ABC transporter permease protein YjfF YP_005279712.1 PFAM: inner-membrane translocator; KEGG: eoi:ECO111_5114 putative sugar transporter subunit YP_005279713.1 KEGG: eoh:ECO103_5025 putative sugar transporter subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_005279714.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: sbc:SbBS512_E4856 putative sugar ABC transporter, periplasmic sugar-binding protein YP_005279715.1 KEGG: ebd:ECBD_3807 inorganic pyrophosphatase; PFAM: Inorganic pyrophosphatase YP_005279716.1 KEGG: eok:G2583_5055 PemK protein 2; manually curated; PFAM: PemK family protein YP_005279717.1 PFAM: SpoVT/AbrB domain-containing protein; KEGG: eoh:ECO103_5021 antitoxin ChpS YP_005279718.1 PFAM: AIG2 family protein; KEGG: sdy:SDY_4459 hypothetical protein YP_005279719.1 PFAM: protein of unknown function DUF490; KEGG: ssn:SSON_4406 hypothetical protein YP_005279720.1 PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein; KEGG: sbc:SbBS512_E4861 outer membrane protein, OMP85 family YP_005279721.1 TIGRFAM: peptide methionine sulfoxide reductase; KEGG: ssn:SSON_4404 methionine sulfoxide reductase A; PFAM: Methionine sulfoxide reductase A YP_005279722.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: ebd:ECBD_3812 protein of unknown function DUF21 YP_005279723.1 PFAM: protein of unknown function DUF1107; KEGG: sdy:SDY_4454 hypothetical protein YP_005279724.1 PFAM: Conserved hypothetical protein, YtfJ; KEGG: eoh:ECO103_5014 putative transcriptional regulator YP_005279725.1 KEGG: sdy:SDY_4385 adenosine-3'(2'),5'-bisphosphate nucleotidase; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase; PFAM: inositol monophosphatase YP_005279726.1 KEGG: ebw:BWG_3924 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; TIGRFAM: 2',3'-cyclic-nucleotide 2'-phosphodiesterase; PFAM: 5'-Nucleotidase domain-containing protein; metallophosphoesterase YP_005279727.1 PFAM: helix-turn-helix HxlR type; KEGG: sbc:SbBS512_E4753 putative transcriptional regulator YP_005279728.1 KEGG: sbo:SBO_4231 putative oxidoreductase YP_005279729.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: eoh:ECO103_5009 putative inner membrane protein YP_005279730.1 KEGG: sdy:SDY_4379 iron-sulfur cluster repair di-iron protein; TIGRFAM: iron-sulfur cluster repair di-iron protein; PFAM: protein of unknown function DUF542 ScdA domain protein; Hemerythrin HHE cation binding domain protein YP_005279731.1 PFAM: amino acid permease-associated region; KEGG: sdy:SDY_4378 D-alanine/D-serine/glycine permease YP_005279732.1 KEGG: sfv:SFV_4280 peptidyl-prolyl cis-trans isomerase; PFAM: peptidylprolyl isomerase FKBP-type; FKBP-type peptidyl-prolyl isomerase domain protein YP_005279733.1 PFAM: Opacity-associated protein A domain protein; KEGG: sdy:SDY_4376 hypothetical protein YP_005279734.1 KEGG: eoh:ECO103_1983 putative IS609 transposase TnpB; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB YP_005279735.1 KEGG: eoi:ECO111_5010 hypothetical protein YP_005279736.1 KEGG: sbc:SbBS512_E4736 50S ribosomal protein L9; TIGRFAM: ribosomal protein L9; PFAM: Ribosomal protein L9-like YP_005279737.1 KEGG: pam:PANA_3522 RpsR; TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18 YP_005279738.1 PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: sbc:SbBS512_E4734 primosomal replication protein N YP_005279739.1 KEGG: sdy:SDY_4369 30S ribosomal protein S6; TIGRFAM: ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like YP_005279740.1 PFAM: protein of unknown function DUF1471; KEGG: sbc:SbBS512_E4732 hypothetical protein YP_005279741.1 PFAM: protein of unknown function DUF1440; KEGG: sbo:SBO_4256 hypothetical protein YP_005279742.1 PFAM: class II aldolase/adducin family protein; KEGG: eok:G2583_5025 L-ribulose-5-phosphate 4-epimerase UlaF YP_005279743.1 TIGRFAM: hexulose-6-phosphate isomerase; KEGG: sbo:SBO_4258 L-xylulose 5-phosphate 3-epimerase; PFAM: Xylose isomerase domain-containing protein TIM barrel YP_005279744.1 PFAM: Orotidine 5'-phosphate decarboxylase; KEGG: sbo:SBO_4259 3-keto-L-gulonate-6-phosphate decarboxylase YP_005279745.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: sbo:SBO_4260 L-ascorbate-specific enzyme IIA component of PTS YP_005279746.1 manually curated; KEGG: sek:SSPA3900 PTS system ascorbate-specific transporter subunit IIC YP_005279747.1 KEGG: ssn:SSON_4374 putative L-ascorbate 6-phosphate lactonase YP_005279748.1 KEGG: sbc:SbBS512_E4720 transcriptional repressor UlaR; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_005279749.1 KEGG: sbo:SBO_4265 esterase YP_005279750.1 PFAM: protein of unknown function DUF1471; KEGG: sbc:SbBS512_E4719 putative biofilm stress and motility protein A YP_005279751.1 PFAM: protein of unknown function DUF1471; KEGG: sbo:SBO_4267 hypothetical protein YP_005279752.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: eoh:ECO103_4980 isovaleryl CoA dehydrogenase YP_005279753.1 PFAM: glutathionylspermidine synthase; KEGG: ebd:ECBD_3848 glutathionylspermidine synthase YP_005279754.1 PFAM: protein of unknown function DUF1190; KEGG: eoh:ECO103_4978 hypothetical protein YP_005279755.1 PFAM: protein of unknown function DUF350; KEGG: ebd:ECBD_3850 protein of unknown function DUF350 YP_005279756.1 PFAM: Protein of unknown function DUF2491; KEGG: eoh:ECO103_4976 hypothetical protein YP_005279757.1 PFAM: PspA/IM30 family protein; KEGG: ebd:ECBD_3852 phage shock protein A, PspA YP_005279758.1 PFAM: Protein of unknown function DUF2170; KEGG: eoi:ECO111_5033 hypothetical protein YP_005279759.1 KEGG: ssn:SSON_4365 23S rRNA (guanosine-2'-O-)-methyltransferase; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding YP_005279760.1 SMART: Cold shock protein; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; KEGG: sfv:SFV_4337 exoribonuclease R; PFAM: ribonuclease II; Ribonuclease B OB region domain; Ribonuclease R winged-helix domain protein; RNA binding S1 domain protein YP_005279761.1 KEGG: ebd:ECBD_3856 transcriptional repressor NsrR; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074 YP_005279762.1 SMART: adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; KEGG: sdy:SDY_4412 adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase YP_005279763.1 PFAM: Protein of unknown function DUF2065; KEGG: sdy:SDY_4413 hypothetical protein YP_005279764.1 TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: sbc:SbBS512_E4706 FtsH protease regulator HflC; SMART: band 7 protein YP_005279765.1 TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: sbc:SbBS512_E4705 FtsH protease regulator HflK; SMART: band 7 protein YP_005279766.1 KEGG: ssn:SSON_4358 putative GTPase HflX; TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related YP_005279767.1 KEGG: sbo:SBO_4284 RNA-binding protein Hfq; TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core YP_005279768.1 TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: sbo:SBO_4285 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase YP_005279769.1 KEGG: eoh:ECO103_4963 DNA mismatch repair protein; TIGRFAM: DNA mismatch repair protein MutL; PFAM: DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein; MutL dimerisation YP_005279770.1 KEGG: ssn:SSON_4354 N-acetylmuramoyl-L-alanine amidase II; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin YP_005279771.1 PFAM: Uncharacterised protein family UPF0079, ATPase; KEGG: sdy:SDY_4421 putative ATPase YP_005279772.1 KEGG: ebw:BWG_3879 hypothetical protein; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain-containing protein YP_005279773.1 manually curated; TIGRFAM: iron-sulfur cluster binding protein; KEGG: sbc:SbBS512_E4697 iron-sulfur cluster binding protein; PFAM: domain of unknown function DUF1730 YP_005279774.1 KEGG: sdy:SDY_4430 oligoribonuclease; PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease YP_005279775.1 KEGG: ebw:BWG_3876 ribosome-associated GTPase; TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC YP_005279776.1 KEGG: sbc:SbBS512_E4692 phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase; PFAM: phosphatidylserine decarboxylase-related YP_005279777.1 PFAM: MscS Mechanosensitive ion channel; KEGG: ebd:ECBD_3872 hypothetical protein YP_005279778.1 KEGG: eoi:ECO111_5053 hypothetical protein YP_005279779.1 KEGG: eoi:ECO111_5054 hypothetical protein YP_005279780.1 KEGG: eok:G2583_4985 hypothetical protein; manually curated; PFAM: amino acid permease-associated region YP_005279781.1 KEGG: sdy:SDY_4399 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase-related protein GenX; PFAM: tRNA synthetase class II (D K and N) YP_005279782.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: cko:CKO_03678 fumarate reductase flavoprotein subunit YP_005279783.1 PFAM: MuA-transposase/repressor protein CI DNA-binding; Mu transposase; KEGG: ebw:BWG_3690 transposase YP_005279784.1 KEGG: pay:PAU_01004 putative phage transcriptional regulator YP_005279785.1 PFAM: MuA-transposase/repressor protein CI DNA-binding; KEGG: ebw:BWG_3689 repressor protein CI YP_005279786.1 manually curated; TIGRFAM: fumarate reductase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; KEGG: sdy:SDY_4398 fumarate reductase flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_005279787.1 KEGG: sbc:SbBS512_E4685 fumarate reductase iron-sulfur subunit; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_005279788.1 PFAM: fumarate reductase subunit C; KEGG: sbc:SbBS512_E4684 fumarate reductase subunit C YP_005279789.1 PFAM: fumarate reductase D subunit; KEGG: sdy:SDY_4395 fumarate reductase subunit D YP_005279790.1 PFAM: beta-lactamase; KEGG: ebw:BWG_3865 beta-lactamase YP_005279791.1 PFAM: Lipocalin family protein; KEGG: ebd:ECBD_3880 outer membrane lipoprotein Blc YP_005279792.1 KEGG: sbo:SBO_4308 SugE; manually curated; PFAM: small multidrug resistance protein YP_005279793.1 PFAM: Entericidin EcnAB; KEGG: sbc:SbBS512_E4679 entericidin B membrane lipoprotein YP_005279794.1 PFAM: Entericidin EcnAB; KEGG: sdy:SDY_4391 entericidin A YP_005279795.1 KEGG: sdy:SDY_4390 elongation factor P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor P ; Elongation factor KOW-like domain-containing protein; Elongation factor P/YeiP protein YP_005279796.1 TIGRFAM: lysine 2,3-aminomutase YodO family protein; KEGG: ebw:BWG_3859 putative lysine aminomutase; PFAM: Radical SAM domain protein YP_005279797.1 PFAM: transposase IS4 family protein; KEGG: amt:Amet_0304 transposase, IS4 family protein YP_005279798.1 PFAM: transposase IS4 family protein; KEGG: acl:ACL_0003 IS-10 transposase YP_005279799.1 KEGG: ebw:BWG_3858 hypothetical protein YP_005279800.1 KEGG: sdy:SDY_4450 hypothetical protein YP_005279801.1 KEGG: sdy:SDY_4449 chaperonin GroEL; TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1 YP_005279802.1 PFAM: Chaperonin Cpn10; KEGG: sdy:SDY_4448 co-chaperonin GroES YP_005279803.1 KEGG: eoh:ECO103_4936 inner membrane protein YjeH; manually curated; PFAM: amino acid permease-associated region YP_005279804.1 PFAM: FxsA cytoplasmic membrane protein; KEGG: sbc:SbBS512_E4669 FxsA YP_005279805.1 KEGG: sdy:SDY_4444 aspartate ammonia-lyase; TIGRFAM: aspartate ammonia-lyase; PFAM: fumarate lyase; Fumarase C-like YP_005279806.1 KEGG: sbc:SbBS512_E4667 anaerobic C4-dicarboxylate transporter; TIGRFAM: anaerobic c4-dicarboxylate antiporter, Dcu family; PFAM: anaerobic c4-dicarboxylate membrane transporter YP_005279807.1 PFAM: CutA1 divalent ion tolerance protein; KEGG: sdy:SDY_4442 divalent-cation tolerance protein CutA YP_005279808.1 KEGG: ebw:BWG_3849 thiol:disulfide interchange protein precursor; PFAM: cytochrome c biogenesis protein transmembrane region; Thioredoxin domain-containing protein YP_005279809.1 PFAM: regulatory protein TetR; KEGG: ssn:SSON_4318 putative transcriptional regulator YP_005279810.1 manually curated YP_005279811.1 PFAM: transcriptional regulator domain-containing protein; KEGG: ebw:BWG_3847 DNA-binding transcriptional activator CadC YP_005279812.1 KEGG: ebd:ECBD_3898 lysine/cadaverine antiporter; TIGRFAM: arginine/ornithine antiporter; PFAM: amino acid permease-associated region YP_005279813.1 KEGG: ebd:ECBD_3899 lysine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein YP_005279814.1 KEGG: ebw:BWG_3844 putative transporter; TIGRFAM: amino acid/peptide transporter; PFAM: TGF-beta receptor type I/II extracellular region YP_005279815.1 KEGG: eok:G2583_4956 lysyl-tRNA synthetase, heat inducible; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type YP_005279816.1 PFAM: Protein of unknown function DUF2566; KEGG: ebd:ECBD_3902 uncharacterized protein YjdO YP_005279817.1 KEGG: ssn:SSON_4305 hypothetical protein YP_005279818.1 KEGG: ebd:ECBD_3904 hypothetical protein YP_005279819.1 KEGG: eok:G2583_4952 hypothetical protein YP_005279820.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; KEGG: sdy:SDY_4238 sensory histidine kinase DcuS; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein YP_005279821.1 KEGG: ebd:ECBD_3907 DNA-binding transcriptional activator DcuR; PFAM: response regulator receiver; SMART: response regulator receiver YP_005279822.1 KEGG: sbo:SBO_4327 anaerobic C4-dicarboxylate transporter; TIGRFAM: anaerobic c4-dicarboxylate antiporter, Dcu family; PFAM: anaerobic c4-dicarboxylate membrane transporter YP_005279823.1 KEGG: ebw:BWG_3835 anaerobic class I fumarate hydratase (fumarase B); TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; Fe-S type hydro-lyase tartrate/fumarate beta region YP_005279824.1 PFAM: Uncharacterised conserved protein UCP020606; KEGG: ebw:BWG_3834 hypothetical protein YP_005279825.1 TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; KEGG: ebw:BWG_3833 melibiose:sodium symporter YP_005279826.1 PFAM: glycoside hydrolase family 4; KEGG: ebw:BWG_3832 alpha-galactosidase, NAD(P)-binding YP_005279827.1 KEGG: ebd:ECBD_3913 DNA-binding transcriptional regulator MelR; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_005279828.1 KEGG: eoh:ECO103_4869 biodegradative arginine decarboxylase AdiA; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein YP_005279829.1 KEGG: ebd:ECBD_3915 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_005279830.1 PFAM: amino acid permease-associated region; KEGG: ssn:SSON_4290 arginine:agmatin antiporter YP_005279831.1 PFAM: sulfatase; protein of unknown function DUF1705; KEGG: etw:ECSP_5213 putative cell division protein YP_005279832.1 KEGG: ebw:BWG_3826 DNA-binding transcriptional regulator BasR; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_005279833.1 KEGG: ebd:ECBD_3919 sensor protein BasS/PmrB; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_005279834.1 KEGG: sdy:SDY_4102 proline/glycine betaine transporter; TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: Osmosensory transporter coiled coil YP_005279835.1 KEGG: ebw:BWG_3823 hypothetical protein YP_005279836.1 KEGG: ebw:BWG_3822 hypothetical protein YP_005279837.1 KEGG: sdy:SDY_4109 hypothetical protein; TIGRFAM: alkylphosphonate utilization operon protein PhnA; PFAM: PhnA protein YP_005279838.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ebd:ECBD_3924 hypothetical protein YP_005279839.1 TIGRFAM: phosphonate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: ebw:BWG_3819 phosphonate/organophosphate ester transporter subunit; SMART: AAA ATPase YP_005279840.1 TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate binding protein; phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: sbo:SBO_4130 periplasmic binding protein component of Pn transporter YP_005279841.1 TIGRFAM: phosphonates metabolism transcriptional regulator PhnF; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; KEGG: ebd:ECBD_3928 phosphonate metabolism transcriptional regulator PhnF; SMART: regulatory protein GntR HTH YP_005279842.1 KEGG: ebw:BWG_3816 carbon-phosphorus lyase complex subunit; TIGRFAM: phosphonate C-P lyase system protein PhnG; PFAM: phosphonate metabolism PhnG YP_005279843.1 KEGG: ebd:ECBD_3930 carbon-phosphorus lyase complex subunit; TIGRFAM: phosphonate C-P lyase system protein PhnH; PFAM: phosphonate metabolism YP_005279844.1 PFAM: phosphonate metabolism; KEGG: ebw:BWG_3814 carbon-phosphorus lyase complex subunit YP_005279845.1 PFAM: phosphonate metabolism PhnJ; KEGG: ebw:BWG_3813 carbon-phosphorus lyase complex subunit YP_005279846.1 TIGRFAM: phosphonate C-P lyase system protein PhnK; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; KEGG: ssn:SSON_4273 phosphonate C-P lyase system protein PhnK; SMART: AAA ATPase YP_005279847.1 TIGRFAM: phosphonate C-P lyase system protein PhnL; PFAM: ABC transporter related; KEGG: ebd:ECBD_3934 phosphonate C-P lyase system protein PhnL; SMART: AAA ATPase YP_005279848.1 KEGG: ebr:ECB_03967 carbon-phosphorus lyase complex subunit; TIGRFAM: phosphonate metabolism protein PhnM; PFAM: amidohydrolase YP_005279849.1 KEGG: ssn:SSON_4270 ribose 1,5-bisphosphokinase; TIGRFAM: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN; SMART: guanylate kinase/L-type calcium channel region YP_005279850.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ebd:ECBD_3937 aminoalkylphosphonic acid N-acetyltransferase YP_005279851.1 TIGRFAM: phosphonate metabolism protein PhnP; KEGG: ebd:ECBD_3938 carbon-phosphorus lyase complex accessory protein YP_005279852.1 KEGG: sbo:SBO_4117 hypothetical protein YP_005279853.1 TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerase, RpiB/LacA/LacB family; KEGG: ebd:ECBD_3940 ribose-5-phosphate isomerase B; PFAM: Ribose/galactose isomerase YP_005279854.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: ebr:ECB_03961 DNA-binding transcriptional repressor RpiR YP_005279855.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ebd:ECBD_3942 D-allose transporter subunit YP_005279856.1 KEGG: ebd:ECBD_3943 D-allose transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_005279857.1 PFAM: inner-membrane translocator; KEGG: ebd:ECBD_3944 D-allose transporter subunit YP_005279858.1 KEGG: ebd:ECBD_3945 allulose-6-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase YP_005279859.1 PFAM: ROK family protein; KEGG: ebd:ECBD_3946 D-allose kinase YP_005279860.1 KEGG: ebw:BWG_3798 putative alkyl sulfatase YP_005279861.1 KEGG: ebd:ECBD_3948 formate dehydrogenase H YP_005279862.1 KEGG: ebd:ECBD_3949 multidrug resistance protein MdtN; TIGRFAM: efflux pump membrane protein; PFAM: secretion protein HlyD family protein YP_005279863.1 PFAM: Fusaric acid resistance protein conserved region; KEGG: ebw:BWG_3795 multidrug efflux system protein MdtO YP_005279864.1 KEGG: ebd:ECBD_3951 putative outer membrane efflux protein MdtP; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT family; PFAM: outer membrane efflux protein YP_005279865.1 manually curated; TIGRFAM: formate dehydrogenase, alpha subunit; KEGG: ebr:ECB_03951 formate dehydrogenase-H, selenopolypeptide subunit; PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region YP_005279866.1 PFAM: Sel1 domain protein repeat-containing protein; KEGG: ssn:SSON_4259 hypothetical protein YP_005279867.1 PFAM: sodium:dicarboxylate symporter; KEGG: ebw:BWG_3791 glutamate/aspartate:proton symporter YP_005279868.1 KEGG: ebr:ECB_03948 formate-dependent nitrite reductase complex subunit NrfG; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat YP_005279869.1 KEGG: ebw:BWG_3789 formate-dependent nitrite reductase complex subunit NrfF; TIGRFAM: cytochrome c nitrite reductase, accessory protein NrfF; PFAM: cytochrome C biogenesis protein YP_005279870.1 KEGG: ebw:BWG_3788 heme lyase subunit NrfE; TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein YP_005279871.1 KEGG: ebd:ECBD_3959 cytochrome c nitrite reductase, NrfD subunit; TIGRFAM: cytochrome c nitrite reductase, NrfD subunit; PFAM: Polysulphide reductase NrfD YP_005279872.1 TIGRFAM: cytochrome c nitrite reductase, Fe-S protein; KEGG: sbo:SBO_4103 formate-dependent nitrite reductase complex Fe-S centers YP_005279873.1 TIGRFAM: cytochrome c nitrite reductase, pentaheme subunit; KEGG: ssn:SSON_4252 cytochrome c nitrite reductase pentaheme subunit YP_005279874.1 TIGRFAM: formate-dependent cytochrome c nitrite reductase, c552 subunit; KEGG: sbc:SbBS512_E4591 cytochrome c552; PFAM: cytochrome c552 YP_005279875.1 KEGG: ebd:ECBD_3963 acetyl-CoA synthetase; TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase YP_005279876.1 PFAM: protein of unknown function DUF485; KEGG: sbc:SbBS512_E4587 hypothetical protein YP_005279877.1 KEGG: ebr:ECB_03939 acetate permease; TIGRFAM: cation/acetate symporter ActP; SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter YP_005279878.1 PFAM: pentapeptide repeat protein; KEGG: ebr:ECB_03938 hypothetical protein YP_005279879.1 KEGG: ebw:BWG_3779 putative cation/proton antiporter; TIGRFAM: Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger YP_005279880.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: sdy:SDY_4503 hypothetical protein YP_005279881.1 TIGRFAM: redox-sensitive transcriptional activator SoxR; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; KEGG: sdy:SDY_4504 redox-sensing activator of SoxS; SMART: regulatory protein MerR YP_005279882.1 KEGG: sbc:SbBS512_E4580 DNA-binding transcriptional regulator SoxS; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_005279883.1 KEGG: ebd:ECBD_3971 EAL domain protein; PFAM: EAL domain protein; SMART: EAL domain protein YP_005279884.1 KEGG: sbc:SbBS512_E4574 hypothetical protein YP_005279885.1 KEGG: sbo:SBO_4088 single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n YP_005279886.1 KEGG: sbc:SbBS512_E4572 excinuclease ABC subunit A; TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related YP_005279887.1 KEGG: sdy:SDY_4510 hypothetical protein YP_005279888.1 PFAM: protein of unknown function UPF0047; KEGG: ssn:SSON_4236 hypothetical protein YP_005279889.1 TIGRFAM: HAD superfamily (subfamily IIIB) phosphatase, TIGR01672; KEGG: sbc:SbBS512_E4569 acid phosphatase/phosphotransferase; PFAM: acid phosphatase (Class B) YP_005279890.1 KEGG: eoi:ECO111_4928 aromatic amino acid aminotransferase; PFAM: aminotransferase class I and II YP_005279891.1 TIGRFAM: alanine racemase; KEGG: sfv:SFV_4160 alanine racemase; PFAM: alanine racemase domain protein YP_005279892.1 TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; KEGG: sbc:SbBS512_E4543 replicative DNA helicase; SMART: AAA ATPase YP_005279893.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ssn:SSON_4231 quinone oxidoreductase, NADPH-dependent YP_005279894.1 manually curated; TIGRFAM: phage shock protein G; KEGG: sfv:SFV_4163 phage shock protein G; PFAM: shock protein G YP_005279895.1 KEGG: ssn:SSON_4229 tRNA-dihydrouridine synthase A; TIGRFAM: TIM-barrel protein, yjbN family; PFAM: dihydrouridine synthase DuS YP_005279896.1 PFAM: Protein of unknown function DUF2713; KEGG: etw:ECSP_5125 hypothetical protein YP_005279897.1 PFAM: ferric-uptake regulator; KEGG: ssn:SSON_4226 zinc uptake transcriptional repressor YP_005279898.1 PFAM: CsbD family protein; KEGG: sdy:SDY_4529 putative stress-response protein YP_005279899.1 manually curated; TIGRFAM: MATE efflux family protein; KEGG: sfv:SFV_4169 DNA-damage-inducible SOS response protein; PFAM: multi antimicrobial extrusion protein MatE YP_005279900.1 KEGG: sdy:SDY_4531 LexA repressor; TIGRFAM: LexA repressor; PFAM: LexA DNA-binding domain protein; Peptidase S24/S26A/S26B, conserved region YP_005279901.1 KEGG: sdy:SDY_4532 diacylglycerol kinase; PFAM: diacylglycerol kinase YP_005279902.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: eok:G2583_4866 glycerol-3-phosphate acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_005279903.1 KEGG: sfv:SFV_4173 4-hydroxybenzoate octaprenyltransferase; TIGRFAM: 4-hydroxybenzoate polyprenyl transferase; PFAM: UbiA prenyltransferase YP_005279904.1 KEGG: sdy:SDY_4535 chorismate pyruvate lyase; PFAM: Chorismate lyase YP_005279905.1 KEGG: ebd:ECBD_3996 hypothetical protein YP_005279906.1 KEGG: ebd:ECBD_3997 hypothetical protein YP_005279907.1 PFAM: Maltose operon periplasmic; KEGG: eoi:ECO111_4859 maltose regulon periplasmic protein YP_005279908.1 PFAM: porin LamB type; KEGG: ssn:SSON_4214 maltoporin YP_005279909.1 manually curated; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; KEGG: ssn:SSON_4213 maltose/maltodextrin transporter ATP-binding protein; SMART: AAA ATPase YP_005279910.1 KEGG: ebd:ECBD_4001 hypothetical protein YP_005279911.1 PFAM: extracellular solute-binding protein family 1; KEGG: ebd:ECBD_4002 maltose ABC transporter periplasmic protein YP_005279912.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sfv:SFV_4181 maltose transporter membrane protein YP_005279913.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sfx:S3558 maltose transporter permease YP_005279914.1 TIGRFAM: sugar transporter; KEGG: eoh:ECO103_4779 D-xylose transporter XylE YP_005279915.1 PFAM: Phosphate-starvation-inducible E-like; KEGG: sdy:SDY_4218 phosphate-starvation-inducible protein PsiE YP_005279916.1 PFAM: protein of unknown function DUF940 membrane lipoprotein; KEGG: ebw:BWG_3685 putative porin YP_005279917.1 PFAM: protein of unknown function DUF1017; KEGG: ebd:ECBD_4009 protein of unknown function DUF1017 YP_005279918.1 KEGG: eoh:ECO103_4775 putative lipoprotein YP_005279919.1 KEGG: eoh:ECO103_4773 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI) YP_005279920.1 TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; KEGG: eoh:ECO103_4772 aspartate kinase III; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein YP_005279921.1 KEGG: eoi:ECO111_4845 hypothetical protein YP_005279922.1 PFAM: Nucleotidyltransferase, predicted; KEGG: eoh:ECO103_4770 hypothetical protein YP_005279923.1 KEGG: eoj:ECO26_5136 hypothetical protein; PFAM: band 7 protein; SMART: band 7 protein YP_005279924.1 KEGG: sdy:SDY_4309 hypothetical protein YP_005279925.1 KEGG: eok:G2583_4847 ribosomal large subunit pseudouridine synthase F; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_005279926.1 KEGG: sbc:SbBS512_E4515 peptidase E; PFAM: peptidase S51 dipeptidase E YP_005279927.1 KEGG: ssn:SSON_4191 putative alpha helix protein; TIGRFAM: sodium-dependent inorganic phosphate (Pi) transporter; Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; PhoU family protein YP_005279928.1 KEGG: ebw:BWG_3675 B12-dependent methionine synthase; TIGRFAM: methionine synthase; PFAM: homocysteine S-methyltransferase; dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; Vitamin B12 dependent methionine synthase activation region YP_005279929.1 KEGG: sfx:S3646 transcriptional repressor IclR; PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR YP_005279930.1 PFAM: ShET2 enterotoxin domain protein; KEGG: eoi:ECO111_4829 T3SS effector-like protein EspL-homolog YP_005279931.1 KEGG: eoh:ECO103_4760 bifunctional isocitrate dehydrogenase kinase/phosphatase protein; PFAM: Isocitrate dehydrogenase kinasephosphatase YP_005279932.1 KEGG: sdy:SDY_4328 isocitrate lyase; TIGRFAM: isocitrate lyase; PFAM: isocitrate lyase and phosphorylmutase YP_005279933.1 TIGRFAM: malate synthase A; KEGG: eoi:ECO111_4826 malate synthase; PFAM: Malate synthase family protein YP_005279934.1 TIGRFAM: homoserine O-succinyltransferase; KEGG: eoh:ECO103_4757 homoserine O-succinyltransferase; PFAM: homoserine O-succinyltransferase YP_005279935.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eoh:ECO103_4756 hypothetical protein YP_005279936.1 SMART: AICARFT/IMPCHase bienzyme formylation region; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; KEGG: sbc:SbBS512_E4498 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein YP_005279937.1 TIGRFAM: phosphoribosylamine/glycine ligase; KEGG: ebd:ECBD_4027 phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain YP_005279938.1 KEGG: sbc:SbBS512_E4497 transcriptional regulatory protein ZraR; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase YP_005279939.1 KEGG: eoh:ECO103_4752 sensor protein ZraS; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_005279941.1 KEGG: eoh:ECO103_4751 zinc resistance protein YP_005279942.1 KEGG: sdy:SDY_3725 hypothetical protein; manually curated; PFAM: protein of unknown function DUF1481 YP_005279943.1 KEGG: sdy:SDY_3726 transcriptional regulator HU subunit alpha; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_005279944.1 PFAM: protein of unknown function DUF416; KEGG: ssn:SSON_4172 hypothetical protein YP_005279945.1 KEGG: sbc:SbBS512_E4489 endonuclease V; PFAM: Endonuclease V YP_005279946.1 TIGRFAM: uroporphyrinogen decarboxylase; KEGG: sbc:SbBS512_E4488 uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D) YP_005279947.1 KEGG: ssn:SSON_4169 NADH pyrophosphatase; PFAM: NUDIX hydrolase; NADH pyrophosphatase-like ; Zinc ribbon NADH pyrophosphatase YP_005279948.1 PFAM: regulator of RNA polymerase sigma(70) subunit Rsd/AlgQ; KEGG: sbc:SbBS512_E4486 anti-RNA polymerase sigma 70 factor YP_005279949.1 KEGG: eoh:ECO103_4743 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC YP_005279950.1 KEGG: sbc:SbBS512_E4484 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase YP_005279951.1 KEGG: sfv:SFV_4064 thiamine biosynthesis protein ThiF; TIGRFAM: thiazole biosynthesis adenylyltransferase ThiF; PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein YP_005279952.1 KEGG: eoh:ECO103_4740 sulfur carrier protein ThiS; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein YP_005279953.1 PFAM: thiazole biosynthesis family protein; KEGG: eoh:ECO103_4739 thiazole synthase YP_005279954.1 KEGG: eoi:ECO111_4806 thiamine biosynthesis protein ThiH; TIGRFAM: thiazole biosynthesis protein ThiH; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein YP_005279955.1 TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 4; RNA polymerase Rpb1 domain 5; KEGG: sbo:SBO_4008 DNA-directed RNA polymerase subunit beta'; SMART: RNA polymerase I subunit A domain protein YP_005279956.1 KEGG: sbc:SbBS512_E4475 DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2 domain 3; RNA polymerase beta subunit; RNA polymerase Rpb2 domain 2; RNA polymerase Rpb2 domain 7 YP_005279957.1 KEGG: sdy:SDY_3742 50S ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12 YP_005279958.1 PFAM: ribosomal protein L10; KEGG: sdy:SDY_3743 50S ribosomal protein L10 YP_005279959.1 KEGG: sdy:SDY_3744 50S ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1 YP_005279960.1 TIGRFAM: ribosomal protein L11; PFAM: Ribosomal protein L11-like; KEGG: sdy:SDY_3745 50S ribosomal protein L11; SMART: ribosomal protein L11 YP_005279961.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain-containing protein; KOW domain protein; KEGG: sdy:SDY_3746 transcription antitermination protein NusG; SMART: NGN domain-containing protein; KOW domain protein YP_005279962.1 KEGG: sbc:SbBS512_E4469 preprotein translocase subunit SecE; TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein YP_005279963.1 KEGG: sbc:SbBS512_E4468 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain-containing protein YP_005279964.1 KEGG: sfv:SFV_4047 pantothenate kinase; manually curated; TIGRFAM: pantothenate kinase YP_005279965.1 TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; biotin operon repressor; KEGG: efe:EFER_3778 biotin--protein ligase; PFAM: biotin/lipoate A/B protein ligase; biotin protein ligase domain protein YP_005279966.1 KEGG: eoh:ECO103_4726 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain-containing protein; FAD linked oxidase domain protein YP_005279967.1 TIGRFAM: glutamate racemase; KEGG: eoh:ECO103_4725 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase YP_005279968.1 KEGG: ssn:SSON_4139 vitamin B12/cobalamin outer membrane transporter; TIGRFAM: TonB-dependent vitamin B12 receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor YP_005279969.1 KEGG: ebd:ECBD_4059 tRNA (uracil-5-)-methyltransferase; TIGRFAM: tRNA (uracil-5-)-methyltransferase; PFAM: (Uracil-5)-methyltransferase YP_005279970.1 PFAM: protein of unknown function DUF1422; KEGG: sbc:SbBS512_E4450 hypothetical protein YP_005279971.1 PFAM: regulatory protein TetR; KEGG: sdy:SDY_3765 DNA-binding transcriptional repressor FabR YP_005279972.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: efe:EFER_3800 soluble pyridine nucleotide transhydrogenase YP_005279973.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sdy:SDY_3796 DNA-binding transcriptional regulator OxyR YP_005279974.1 KEGG: eoi:ECO111_4785 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase YP_005279975.1 KEGG: ebd:ECBD_4065 acetylglutamate kinase; TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_005279976.1 TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: ebd:ECBD_4066 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region YP_005279977.1 KEGG: eoh:ECO103_4713 acetylornithine deacetylase; TIGRFAM: acetylornithine deacetylase (ArgE); PFAM: peptidase M20; peptidase dimerisation domain protein YP_005279978.1 KEGG: ssn:SSON_4129 phosphoenolpyruvate carboxylase; PFAM: Phosphoenolpyruvate carboxylase, C-terminal region YP_005279979.1 PFAM: sulfatase; KEGG: sbc:SbBS512_E4441 hypothetical protein YP_005279980.1 KEGG: ebd:ECBD_4070 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_005279981.1 KEGG: sbc:SbBS512_E4440 putative fructose-like phosphotransferase EIIB subunit 3; TIGRFAM: PTS system, fructose-specific, IIB subunnit YP_005279982.1 TIGRFAM: glycyl-radical enzyme activating protein family; KEGG: ssn:SSON_4125 pyruvate formate lyase II activase; PFAM: Radical SAM domain protein YP_005279983.1 TIGRFAM: pyruvate formate-lyase; KEGG: eoh:ECO103_4707 putative formate acetyltransferase 2; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical YP_005279984.1 KEGG: sdy:SDY_3785 putative fructose-like phosphotransferase EIIB subunit 2; TIGRFAM: PTS system, fructose-specific, IIB subunnit YP_005279985.1 KEGG: ebd:ECBD_4075 putative fructose-like permease EIIC subunit 2; TIGRFAM: PTS system, fructose subfamily, IIC subunit; PFAM: phosphotransferase system EIIC YP_005279986.1 KEGG: eoh:ECO103_4704 fused putative PTS enzymes PtsA: HPr component/enzyme I component/enzyme IIA component; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; phosphoryl transfer system HPr; PEP-utilising protein domain protein; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 YP_005279987.1 TIGRFAM: transaldolase; KEGG: sbo:SBO_3966 fructose-6-phosphate aldolase; PFAM: Transaldolase YP_005279988.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: ebd:ECBD_4078 glycerol dehydrogenase YP_005279989.1 PFAM: protein of unknown function DUF1287; KEGG: eoh:ECO103_4701 hypothetical protein YP_005279990.1 KEGG: sbo:SBO_3963 hypothetical protein; manually curated; PFAM: protein of unknown function DUF6 transmembrane YP_005279991.1 KEGG: sfv:SFV_4012 catalase; hydroperoxidase HPI(I); TIGRFAM: catalase/peroxidase HPI; PFAM: Haem peroxidase YP_005279992.1 TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: sbc:SbBS512_E4428 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase YP_005279993.1 KEGG: sbo:SBO_3960 bifunctional aspartate kinase II/homoserine dehydrogenase II; TIGRFAM: aspartate kinase; PFAM: homoserine dehydrogenase; aspartate/glutamate/uridylate kinase; homoserine dehydrogenase NAD-binding YP_005279994.1 KEGG: ssn:SSON_4113 cystathionine gamma-synthase; TIGRFAM: O-succinylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_005279995.1 PFAM: Methionine repressor MetJ; KEGG: sdy:SDY_3773 transcriptional repressor protein MetJ YP_005279996.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: eoh:ECO103_4940 putative IS621 transposase YP_005279997.1 KEGG: ebd:ECBD_4086 putative peptidoglycan peptidase YP_005279998.1 KEGG: eok:G2583_4745 hypothetical protein YP_005279999.1 KEGG: eoh:ECO103_4641 rhs core protein with extension; TIGRFAM: YD repeat protein; PFAM: RHS protein; YD repeat-containing protein YP_005280000.1 KEGG: sdy:SDY_3801 50S ribosomal protein L31; TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31 YP_005280001.1 TIGRFAM: primosomal protein N'; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: eoh:ECO103_4593 primosome assembly protein PriA; SMART: DEAD-like helicase ; helicase domain protein YP_005280002.1 KEGG: sbc:SbBS512_E4416 DNA-binding transcriptional regulator CytR; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_005280003.1 manually curated; TIGRFAM: cell division protein FtsN; KEGG: sbc:SbBS512_E4415 essential cell division protein FtsN; PFAM: Sporulation domain-containing protein; chaperone DnaJ domain protein YP_005280004.1 PFAM: 20S proteasome A and B subunits; KEGG: sdy:SDY_3805 ATP-dependent protease peptidase subunit YP_005280005.1 TIGRFAM: heat shock protein HslVU, ATPase subunit HslU; PFAM: ATPase AAA-2 domain protein; KEGG: eoh:ECO103_4597 ATP-dependent protease ATP-binding subunit HslU; SMART: AAA ATPase YP_005280006.1 KEGG: ebd:ECBD_4094 1,4-dihydroxy-2-naphthoate octaprenyltransferase; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase YP_005280007.1 KEGG: sbc:SbBS512_E4411 ribonuclease activity regulator protein RraA; TIGRFAM: regulator of ribonuclease activity A; PFAM: Dimethylmenaquinone methyltransferase YP_005280008.1 PFAM: protein of unknown function DUF904; KEGG: sdy:SDY_3816 hypothetical protein YP_005280009.1 KEGG: ssn:SSON_4096 facilitated diffusion of glycerol; TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein YP_005280010.1 KEGG: sbo:SBO_3943 glycerol kinase; TIGRFAM: glycerol kinase; PFAM: Carbohydrate kinase, FGGY-like YP_005280011.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: sdy:SDY_3820 ferredoxin-NADP reductase YP_005280012.1 PFAM: UspA domain-containing protein; KEGG: sbc:SbBS512_E4405 universal stress protein UspD YP_005280013.1 PFAM: Conserved hypothetical protein CHP00743; KEGG: sbc:SbBS512_E4404 hypothetical protein YP_005280014.1 PFAM: protein of unknown function DUF805; KEGG: eoh:ECO103_4607 hypothetical protein YP_005280015.1 PFAM: protein of unknown function DUF1454; KEGG: sbc:SbBS512_E4400 hypothetical protein YP_005280016.1 TIGRFAM: triosephosphate isomerase; KEGG: sdy:SDY_3826 triosephosphate isomerase; PFAM: triosephosphate isomerase YP_005280017.1 TIGRFAM: CDP-diacylglycerol pyrophosphatase; KEGG: sfv:SFV_3576 CDP-diacylglycerol pyrophosphatase; PFAM: CDP-diacylglycerol pyrophosphatase YP_005280018.1 KEGG: ssn:SSON_4086 sulfate transporter subunit; TIGRFAM: sulfate ABC transporter, periplasmic sulfate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_005280019.1 manually curated; TIGRFAM: 6-phosphofructokinase; KEGG: sfv:SFV_3578 6-phosphofructokinase; PFAM: phosphofructokinase YP_005280020.1 KEGG: sdy:SDY_3832 ferrous iron efflux protein F; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_005280021.1 PFAM: transcriptional activator Ogr/delta; KEGG: ebr:ECB_01987 DNA-binding transcriptional regulator YP_005280022.1 KEGG: etw:ECSP_2840 phage protein D YP_005280023.1 PFAM: P2 GpU family protein; KEGG: etw:ECSP_2841 phage protein gpU YP_005280024.1 KEGG: etw:ECSP_2842 phage related tail protein; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region YP_005280025.1 KEGG: etw:ECSP_2844 phage tail tube protein FII; TIGRFAM: phage major tail tube protein; PFAM: major tail tube protein YP_005280026.1 KEGG: etw:ECSP_2845 phage tail sheath protein FI YP_005280027.1 KEGG: shw:Sputw3181_3544 hypothetical protein YP_005280028.1 PFAM: tail assembly chaperone gp38; KEGG: cro:ROD_36591 phage tail fibre assembly protein YP_005280029.1 PFAM: tail fiber repeat 2 protein; KEGG: sbo:SBO_1394 putative bacteriophage tail protein YP_005280030.1 TIGRFAM: phage tail protein I; KEGG: ebr:ECB_01995 hypothetical protein YP_005280031.1 PFAM: Baseplate J family protein; KEGG: etw:ECSP_2852 baseplate assembly protein YP_005280032.1 PFAM: GPW/gp25 family protein; KEGG: etw:ECSP_2853 phage baseplate protein YP_005280033.1 TIGRFAM: phage baseplate assembly protein V; KEGG: ebr:ECB_01998 hypothetical protein YP_005280034.1 TIGRFAM: phage virion morphogenesis protein; KEGG: etw:ECSP_2855 phage tail protein YP_005280035.1 KEGG: etw:ECSP_2856 P2 phage tail completion protein R, GpR YP_005280036.1 KEGG: etw:ECSP_2857 phage lysis protein LysC YP_005280037.1 TIGRFAM: phage lysis regulatory protein, LysB family; KEGG: etw:ECSP_2858 phage lysis timing protein LysB YP_005280038.1 KEGG: etw:ECSP_2859 phage lysis protein LysA YP_005280039.1 KEGG: etw:ECSP_2860 phage lysozyme; PFAM: glycoside hydrolase family 24 YP_005280040.1 PFAM: holin family 2; KEGG: etw:ECSP_2861 hypothetical protein YP_005280041.1 PFAM: tail X family protein; KEGG: etw:ECSP_2862 P2-like prophage tail protein X YP_005280042.1 PFAM: head completion protein; KEGG: etw:ECSP_2863 capsid completion protein YP_005280043.1 PFAM: small terminase subunit; KEGG: etw:ECSP_2864 small terminase subunit YP_005280044.1 KEGG: etw:ECSP_2865 phage major capsid protein, P2 family; TIGRFAM: phage major capsid protein, P2 family; PFAM: major capsid protein P2 YP_005280045.1 PFAM: capsid scaffolding; KEGG: etw:ECSP_2866 phage capsid scaffolding protein GpO YP_005280046.1 KEGG: etw:ECSP_2867 phage large terminase subunit GpP YP_005280047.1 KEGG: etw:ECSP_2868 phage capsid protein; TIGRFAM: phage portal protein, PBSX family; PFAM: portal protein YP_005280048.1 KEGG: ent:Ent638_0467 hypothetical protein YP_005280049.1 KEGG: ent:Ent638_0468 hypothetical protein YP_005280050.1 KEGG: pam:PANA_3164 HsdRM; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase YP_005280051.1 PFAM: protein of unknown function DUF437; KEGG: see:SNSL254_A2943 GP91 YP_005280052.1 PFAM: replication gene A; KEGG: etw:ECSP_2873 phage replication initiation protein YP_005280053.1 KEGG: ebr:ECB_02005 hypothetical protein YP_005280054.1 TIGRFAM: phage/conjugal plasmid C-4 type zinc finger protein, TraR family; KEGG: ebr:ECB_02006 hypothetical protein YP_005280055.1 KEGG: ebr:ECB_02007 hypothetical protein YP_005280056.1 KEGG: etw:ECSP_2877 hypothetical protein YP_005280057.1 KEGG: etw:ECSP_2878 replication gene B protein YP_005280058.1 KEGG: etw:ECSP_2879 hypothetical protein YP_005280059.1 PFAM: Regulatory phage protein Cox; KEGG: see:SNSL254_A4349 Cox protein YP_005280060.1 KEGG: eoj:ECO26_2442 putative repressor protein C; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_005280061.1 PFAM: integrase family protein; KEGG: see:SNSL254_A4348 site-specific recombinase, phage integrase family YP_005280062.1 PFAM: protein of unknown function Spy-related; KEGG: sdy:SDY_3833 periplasmic repressor CpxP YP_005280063.1 KEGG: sdy:SDY_3834 DNA-binding transcriptional regulator CpxR; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_005280064.1 KEGG: sbo:SBO_3929 two-component sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_005280065.1 PFAM: MOSC domain containing protein; 3-alpha domain protein; KEGG: sbo:SBO_3928 hypothetical protein YP_005280066.1 KEGG: ssn:SSON_4079 2-keto-3-deoxygluconate permease; TIGRFAM: 2-keto-3-deoxygluconate transporter; PFAM: 2-keto-3-deoxygluconate permease YP_005280067.1 PFAM: Manganese/iron superoxide dismutase-like; KEGG: sbc:SbBS512_E4387 superoxide dismutase YP_005280068.1 KEGG: sbc:SbBS512_E4385 rhamnose-proton symporter; TIGRFAM: L-rhamnose-proton symporter, RhaT family, DMT superfamily; PFAM: RhaT l-rhamnose-proton symport 2 YP_005280069.1 KEGG: sfx:S3765 transcriptional activator RhaR; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_005280070.1 KEGG: sbo:SBO_3923 transcriptional activator RhaS; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_005280071.1 KEGG: eoh:ECO103_4623 rhamnulokinase; TIGRFAM: rhamnulokinase; PFAM: Carbohydrate kinase, FGGY-like YP_005280072.1 TIGRFAM: L-rhamnose isomerase; KEGG: ebw:BWG_3573 L-rhamnose isomerase; PFAM: L-rhamnose isomerase YP_005280073.1 TIGRFAM: rhamnulose-1-phosphate aldolase; KEGG: eoh:ECO103_4625 rhamnulose-1-phosphate aldolase; PFAM: class II aldolase/adducin family protein YP_005280074.1 KEGG: ssn:SSON_4071 hypothetical protein; TIGRFAM: L-rhamnose 1-epimerase; PFAM: protein of unknown function DUF718 YP_005280075.1 KEGG: sbo:SBO_3916 putative fructose-like phosphotransferase system subunit EIIA; TIGRFAM: PTS system, fructose subfamily, IIA subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 YP_005280076.1 TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose-specific, IIB subunnit; KEGG: eoh:ECO103_4628 putative PTS system transporter subunits IIBC; PFAM: phosphotransferase system EIIC; phosphotransferase system lactose/cellobiose-specific IIB subunit YP_005280077.1 KEGG: eoh:ECO103_4629 putative fructose-specific phosphotransferase system protein FrvX; PFAM: peptidase M42 family protein YP_005280078.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: ssn:SSON_4067 putative frv operon regulatory protein YP_005280079.1 KEGG: eoh:ECO103_4631 hypothetical protein YP_005280080.1 KEGG: eok:G2583_4699 ApaG; TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD YP_005280081.1 PFAM: molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; KEGG: sbo:SBO_3908 formate dehydrogenase-O, major subunit YP_005280082.1 TIGRFAM: formate dehydrogenase, alpha subunit; KEGG: ssn:SSON_4063 formate dehydrogenase-O, major subunit; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region YP_005280083.1 KEGG: sbc:SbBS512_E4372 formate dehydrogenase-O, iron-sulfur subunit; TIGRFAM: formate dehydrogenase, beta subunit; PFAM: Formate dehydrogenase transmembrane domain protein YP_005280084.1 TIGRFAM: formate dehydrogenase, gamma subunit; KEGG: sdy:SDY_3851 formate dehydrogenase-O subunit gamma YP_005280085.1 KEGG: sdy:SDY_3852 formate dehydrogenase accessory protein FdhE; TIGRFAM: formate dehydrogenase accessory protein FdhE; PFAM: formate dehydrogenase accessory protein YP_005280086.1 KEGG: ebd:ECBD_4135 hypothetical protein YP_005280087.1 KEGG: sbc:SbBS512_E4369 hypothetical protein YP_005280088.1 KEGG: sfv:SFV_3606 hypothetical protein YP_005280090.1 KEGG: eoh:ECO103_4280 putative DNA-binding transcriptional regulator, MerR family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_005280091.1 KEGG: eoh:ECO103_4281 hypothetical protein YP_005280092.1 KEGG: eoh:ECO103_4282 putative lipase YP_005280093.1 KEGG: sbo:SBO_3902 putative acetyltransferase; TIGRFAM: thioesterase domain protein; PFAM: Thioesterase putative; GCN5-related N-acetyltransferase YP_005280094.1 KEGG: sbc:SbBS512_E4365 D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase YP_005280095.1 KEGG: sdy:SDY_3857 ribonuclease BN; TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN YP_005280096.1 KEGG: sbc:SbBS512_E4363 phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase YP_005280097.1 KEGG: ebd:ECBD_4143 transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_005280098.1 PFAM: PfkB domain protein; KEGG: ebd:ECBD_4144 PfkB domain protein YP_005280099.1 KEGG: sfv:SFV_3617 putative dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase NAD-binding YP_005280100.1 PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: ebd:ECBD_4146 deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_005280101.1 PFAM: N-acylglucosamine 2-epimerase; KEGG: ebd:ECBD_4147 N-acylglucosamine 2-epimerase YP_005280102.1 PFAM: Aldose 1-epimerase; KEGG: sfv:SFV_3620 putative aldose-1-epimerase YP_005280103.1 PFAM: glycoside hydrolase family 31; KEGG: ebw:BWG_3548 alpha-glucosidase YP_005280104.1 TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; KEGG: ebw:BWG_3547 putative transporter YP_005280105.1 TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; KEGG: eoh:ECO103_4295 putative transporter YP_005280106.1 PFAM: Oligogalacturonate-specific porin; KEGG: eoh:ECO103_4296 outer membrane porin L YP_005280107.1 PFAM: major facilitator superfamily MFS_1; KEGG: ebd:ECBD_4153 sugar phosphate permease-like protein YP_005280108.1 PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: eoh:ECO103_4298 putative sugar phosphate isomerase YP_005280109.1 KEGG: ebd:ECBD_4155 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain-containing protein; SMART: regulatory protein GntR HTH YP_005280110.1 KEGG: sdy:SDY_3872 GTP-binding protein; TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein YP_005280111.1 KEGG: sdy:SDY_3873 glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp YP_005280112.1 KEGG: plu:plu4427 hypothetical protein YP_005280113.1 KEGG: ssn:SSON_4041 nitrogen regulation protein NR(II); PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein YP_005280114.1 TIGRFAM: nitrogen regulation protein NR(I); PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; KEGG: sdy:SDY_3875 nitrogen regulation protein NR(I); SMART: response regulator receiver; AAA ATPase YP_005280115.1 KEGG: ebd:ECBD_4160 hypothetical protein YP_005280116.1 TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; KEGG: sbc:SbBS512_E4342 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB YP_005280117.1 PFAM: protein of unknown function DUF414; KEGG: sbc:SbBS512_E4340 hypothetical protein YP_005280118.1 KEGG: sdy:SDY_3878 ribosome biogenesis GTP-binding protein YsxC; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; PFAM: GTP-binding protein HSR1-related YP_005280119.1 TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; KEGG: sbc:SbBS512_E4337 DNA polymerase I; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; 3'-5' exonuclease; DNA-directed DNA polymerase YP_005280120.1 KEGG: sbc:SbBS512_E4336 hypothetical protein YP_005280121.1 KEGG: sbo:SBO_3875 putative acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_005280122.1 PFAM: protein of unknown function DUF945; KEGG: eoi:ECO111_4682 hypothetical protein YP_005280123.1 PFAM: DSBA oxidoreductase; KEGG: sbc:SbBS512_E4332 periplasmic protein disulfide isomerase I YP_005280124.1 PFAM: aminoglycoside phosphotransferase; KEGG: eok:G2583_4657 putative kinase YP_005280125.1 PFAM: protein of unknown function DUF1040; KEGG: sdy:SDY_3887 hypothetical protein YP_005280126.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: eoh:ECO103_4313 molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_005280127.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; KEGG: eoh:ECO103_4314 molybdopterin-guanine dinucleotide biosynthesis protein B YP_005280128.1 KEGG: eoi:ECO111_4676 protoporphyrinogen oxidase; PFAM: flavodoxin/nitric oxide synthase YP_005280129.1 KEGG: sdy:SDY_3896 potassium transporter; TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter YP_005280130.1 PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; Uncharacterised protein family UPF0029, Impact, C-terminal; KEGG: sdy:SDY_3897 hypothetical protein YP_005280131.1 KEGG: ebd:ECBD_4178 proline dipeptidase; PFAM: peptidase M24 YP_005280132.1 KEGG: eoh:ECO103_4319 multifunctional fatty acid oxidation complex subunit alpha; TIGRFAM: fatty oxidation complex, alpha subunit FadB; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein YP_005280133.1 KEGG: sbc:SbBS512_E4315 3-ketoacyl-CoA thiolase; TIGRFAM: acetyl-CoA C-acyltransferase FadA; acetyl-CoA acetyltransferase; PFAM: Thiolase-like YP_005280134.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: ssn:SSON_4017 FMN reductase YP_005280135.1 KEGG: ssn:SSON_4016 3-octaprenyl-4-hydroxybenzoate decarboxylase; TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein YP_005280136.1 TIGRFAM: transcriptional activator RfaH; PFAM: NGN domain-containing protein; KEGG: sdy:SDY_3903 transcriptional activator RfaH; SMART: NGN domain-containing protein YP_005280137.1 KEGG: sbc:SbBS512_E4310 twin-arginine protein translocation system subunit TatC; TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase YP_005280138.1 KEGG: ssn:SSON_4012 sec-independent translocase; TIGRFAM: twin-arginine translocation protein, TatB subunit; PFAM: sec-independent translocation protein mttA/Hcf106 YP_005280139.1 KEGG: sdy:SDY_3907 twin arginine translocase protein A; TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106 YP_005280140.1 KEGG: sdy:SDY_3908 putative ubiquinone biosynthesis protein UbiB; TIGRFAM: 2-polyprenylphenol 6-hydroxylase; PFAM: ABC-1 domain-containing protein YP_005280141.1 PFAM: Sterol-binding domain protein; KEGG: sbc:SbBS512_E4306 hypothetical protein YP_005280142.1 KEGG: sdy:SDY_3910 ubiquinone/menaquinone biosynthesis methyltransferase; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase YP_005280143.1 PFAM: protein of unknown function DUF195; KEGG: sbo:SBO_3846 DNA recombination protein RmuC YP_005280144.1 KEGG: ebd:ECBD_4198 uridine phosphorylase; TIGRFAM: uridine phosphorylase; PFAM: purine or other phosphorylase family 1 YP_005280145.1 KEGG: sfl:SF3908 putative enzyme YP_005280146.1 TIGRFAM: 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase; KEGG: eoh:ECO103_4334 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; PFAM: Methionine synthase vitamin-B12 independent; Cobalamin-independent synthase MetE domain protein YP_005280147.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ssn:SSON_4002 regulator for MetE and MetH YP_005280148.1 KEGG: ssn:SSON_4001 hypothetical protein; TIGRFAM: carboxylate/amino acid/amine transporter; PFAM: protein of unknown function DUF6 transmembrane YP_005280149.1 KEGG: sbc:SbBS512_E4293 putative sugar phosphatase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_005280150.1 KEGG: sbc:SbBS512_E4292 lysophospholipase L2; PFAM: alpha/beta hydrolase fold YP_005280151.1 KEGG: sbc:SbBS512_E4291 homoserine/homoserine lactone efflux protein; TIGRFAM: homoserine/threonine efflux pump; PFAM: Lysine exporter protein (LYSE/YGGA) YP_005280152.1 KEGG: eok:G2583_4623 threonine efflux protein; TIGRFAM: homoserine/threonine efflux pump; PFAM: Lysine exporter protein (LYSE/YGGA) YP_005280153.1 TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: RQC domain; DEAD/DEAH box helicase domain protein; helicase domain protein; HRDC domain protein; KEGG: eok:G2583_4622 ATP-dependent DNA helicase RecQ; SMART: HRDC domain protein; DEAD-like helicase ; helicase domain protein YP_005280154.1 KEGG: sdy:SDY_3922 phospholipase A; PFAM: phospholipase A1 YP_005280155.1 PFAM: thioesterase superfamily protein; KEGG: sbc:SbBS512_E4287 hypothetical protein YP_005280156.1 KEGG: ssn:SSON_3993 hypothetical protein; TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane YP_005280157.1 KEGG: eok:G2583_4618 hypothetical protein YP_005280158.1 KEGG: eok:G2583_4616 hypothetical protein; manually curated; PFAM: Mg2 transporter protein CorA family protein YP_005280159.1 KEGG: eoj:ECO26_4769 hypothetical protein YP_005280160.1 PFAM: protein of unknown function DUF943; KEGG: eoh:ECO103_4348 hypothetical protein YP_005280161.1 KEGG: sdy:SDY_3929 magnesium/nickel/cobalt transporter CorA; TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein YP_005280162.1 KEGG: eok:G2583_4612 hypothetical protein YP_005280163.1 KEGG: eoh:ECO103_4351 DNA-dependent helicase II; TIGRFAM: DNA helicase II; PFAM: UvrD/REP helicase YP_005280164.1 KEGG: sbc:SbBS512_E4272 flavin mononucleotide phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_005280165.1 KEGG: sbc:SbBS512_E4271 site-specific tyrosine recombinase XerC; TIGRFAM: tyrosine recombinase XerC; PFAM: integrase family protein; integrase domain protein SAM domain protein YP_005280166.1 PFAM: protein of unknown function DUF484; KEGG: sbc:SbBS512_E4270 hypothetical protein YP_005280167.1 KEGG: sdy:SDY_3936 diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: diaminopimelate epimerase YP_005280168.1 KEGG: ssn:SSON_3981 hypothetical protein YP_005280169.1 KEGG: sdy:SDY_3938 frataxin-like protein; TIGRFAM: iron donor protein CyaY; PFAM: Frataxin family protein YP_005280170.1 KEGG: sbc:SbBS512_E4265 adenylate cyclase; PFAM: adenylate cyclase class-I YP_005280171.1 KEGG: eoh:ECO103_4362 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase YP_005280172.1 PFAM: Uroporphyrinogen III synthase HEM4; KEGG: eoh:ECO103_4363 uroporphyrinogen-III synthase YP_005280173.1 KEGG: eoi:ECO111_4626 putative uroporphyrinogen III C-methyltransferase; PFAM: protein of unknown function DUF513 hemX YP_005280174.1 KEGG: sbc:SbBS512_E4261 putative protoheme IX biogenesis protein; TIGRFAM: HemY protein; PFAM: HemY domain protein YP_005280175.1 PFAM: Radical SAM domain protein; KEGG: sbo:SBO_3812 putative arylsulfatase regulator YP_005280176.1 PFAM: amino acid permease-associated region; KEGG: sdy:SDY_3952 putative transport protein YifK YP_005280177.1 TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; KEGG: sdy:SDY_3953 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; PFAM: glycosyl transferase WecB/TagA/CpsF YP_005280178.1 PFAM: WzyE family protein; KEGG: sfv:SFV_3710 putative common antigen polymerase YP_005280179.1 PFAM: 4-alpha-L-fucosyltransferase; KEGG: eoh:ECO103_4371 4-alpha-L-fucosyltransferase YP_005280180.1 PFAM: polysaccharide biosynthesis protein; KEGG: ebd:ECBD_4247 polysaccharide biosynthesis protein YP_005280181.1 KEGG: ssn:SSON_3963 TDP-4-oxo-6-deoxy-D-glucose transaminase; TIGRFAM: TDP-4-keto-6-deoxy-D-glucose transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase YP_005280182.1 KEGG: eoh:ECO103_4374 TDP-fucosamine acetyltransferase; TIGRFAM: TDP-D-fucosamine acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_005280183.1 KEGG: sbc:SbBS512_E4132 glucose-1-phosphate thymidylyltransferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase YP_005280184.1 KEGG: ebw:BWG_3470 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_005280185.1 TIGRFAM: nucleotide sugar dehydrogenase; KEGG: sfv:SFV_3717 UDP-N-acetyl-D-mannosamine dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_005280186.1 TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: ebd:ECBD_4253 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase YP_005280187.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: eoh:ECO103_4379 lipopolysaccharide biosynthesis protein WzzE YP_005280188.1 KEGG: sdy:SDY_3964 UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase; TIGRFAM: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase; PFAM: Glycosyl transferase, family 4, conserved region YP_005280189.1 KEGG: sbo:SBO_3794 hypothetical protein YP_005280190.1 TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor RNA-binding; Rho termination factor domain protein; KEGG: sdy:SDY_3966 transcription termination factor Rho; SMART: Cold shock protein; AAA ATPase YP_005280191.1 manually curated; KEGG: sdy:SDY_3967 putative rho operon leader peptide YP_005280192.1 KEGG: cko:CKO_00123 hypothetical protein; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain-containing protein YP_005280193.1 KEGG: ssn:SSON_3951 ATP-dependent RNA helicase RhlB; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_005280194.1 KEGG: sbc:SbBS512_E4142 guanosine pentaphosphate phosphohydrolase; PFAM: Ppx/GppA phosphatase YP_005280195.1 KEGG: ssn:SSON_3949 ATP-dependent DNA helicase Rep; TIGRFAM: ATP-dependent DNA helicase Rep; PFAM: UvrD/REP helicase YP_005280196.1 KEGG: eoi:ECO111_4602 hypothetical protein YP_005280197.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: cro:ROD_39731 peptidyl-prolyl cis-trans isomerase C YP_005280198.1 TIGRFAM: ketol-acid reductoisomerase; KEGG: sfv:SFV_3729 ketol-acid reductoisomerase; PFAM: acetohydroxy acid isomeroreductase; Acetohydroxy acid isomeroreductase catalytic domain-containing protein YP_005280199.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: eoj:ECO26_4813 DNA-binding transcriptional regulator IlvY YP_005280200.1 KEGG: ssn:SSON_3943 threonine dehydratase; TIGRFAM: threonine dehydratase, biosynthetic; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; Threonine dehydratase domain-containing protein YP_005280201.1 TIGRFAM: dihydroxy-acid dehydratase; KEGG: sfv:SFV_3731 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_005280202.1 KEGG: sdy:SDY_3978 branched-chain amino acid aminotransferase; TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV YP_005280203.1 KEGG: sdy:SDY_3979 acetolactate synthase 2 regulatory subunit YP_005280204.1 KEGG: eoh:ECO103_4396 acetolactate synthase 2 catalytic subunit; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein YP_005280205.1 TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; KEGG: eoh:ECO103_4398 putative ATP-dependent protease; SMART: AAA ATPase YP_005280206.1 PFAM: protein of unknown function DUF413; KEGG: sdy:SDY_3984 hypothetical protein YP_005280207.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sdy:SDY_3985 transcriptional regulator HdfR YP_005280208.1 KEGG: eoh:ECO103_4401 putative transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_005280209.1 KEGG: eoi:ECO111_4588 putative multidrug or homocysteine efflux system protein HsrA; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_005280210.1 PFAM: inner-membrane translocator; KEGG: sdy:SDY_3997 ribose ABC transporter permease protein YP_005280211.1 KEGG: ebd:ECBD_4281 D-ribose transporter ATP binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_005280212.1 PFAM: RbsD or FucU transport; KEGG: sbc:SbBS512_E4172 D-ribose pyranase YP_005280213.1 KEGG: ebd:ECBD_4285 potassium transport protein Kup; TIGRFAM: potassium uptake protein; PFAM: K potassium transporter YP_005280214.1 KEGG: eoi:ECO111_4580 regulatory ATPase RavA; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_005280215.1 SMART: von Willebrand factor type A; KEGG: sbo:SBO_3742 hypothetical protein YP_005280216.1 TIGRFAM: aspartate/ammonia ligase; KEGG: sdy:SDY_4004 asparagine synthetase AsnA; PFAM: aspartate--ammonia ligase YP_005280217.1 KEGG: sdy:SDY_4005 DNA-binding transcriptional regulator AsnC; PFAM: Transcription regulator AsnC-type-like; SMART: Transcription regulator AsnC-type YP_005280218.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: sbc:SbBS512_E4179 flavodoxin YP_005280219.1 KEGG: sbo:SBO_3746 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; TIGRFAM: glucose inhibited division protein A; PFAM: glucose-inhibited division protein A YP_005280220.1 KEGG: sbc:SbBS512_E4181 16S rRNA methyltransferase GidB; TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein YP_005280221.1 PFAM: ATP synthase I chain; KEGG: sdy:SDY_4009 F0F1 ATP synthase subunit I YP_005280222.1 KEGG: sbc:SbBS512_E4183 F0F1 ATP synthase subunit A; TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit YP_005280223.1 KEGG: cro:ROD_40031 ATP synthase subunit C; TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit YP_005280224.1 KEGG: sdy:SDY_4012 F0F1 ATP synthase subunit B; TIGRFAM: ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit YP_005280225.1 KEGG: sbc:SbBS512_E4186 F0F1 ATP synthase subunit delta; TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit YP_005280226.1 KEGG: sdy:SDY_4014 F0F1 ATP synthase subunit alpha; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein YP_005280227.1 KEGG: sdy:SDY_4015 F0F1 ATP synthase subunit gamma; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit YP_005280228.1 TIGRFAM: ATP synthase F1, beta subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: sbc:SbBS512_E4189 F0F1 ATP synthase subunit beta; SMART: AAA ATPase YP_005280229.1 KEGG: sdy:SDY_4017 F0F1 ATP synthase subunit epsilon; TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit-like YP_005280230.1 TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; KEGG: ebd:ECBD_4302 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein YP_005280231.1 KEGG: ebd:ECBD_4303 glucosamine--fructose-6-phosphate aminotransferase; TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS) YP_005280232.1 PFAM: Fimbrial protein domain-containing protein; KEGG: sbc:SbBS512_E4193 long polar fimbrial operon protein LpfA YP_005280233.1 PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: eoi:ECO111_4560 putative fimbrial chaperone protein precursor YP_005280234.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: eoi:ECO111_4559 putative outer membrane usher protein precursor YP_005280235.1 PFAM: Fimbrial protein domain-containing protein; KEGG: sbc:SbBS512_E4199 long polar fimbrial operon protein LpfD YP_005280236.1 KEGG: sbc:SbBS512_E4200 phosphate ABC transporter periplasmic substrate-binding protein PstS; TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_005280237.1 KEGG: sbc:SbBS512_E4201 phosphate transporter permease subunit PstC; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component YP_005280238.1 KEGG: sfx:S4043 phosphate transporter permease subunit PtsA; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component YP_005280239.1 TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: sdy:SDY_4025 phosphate transporter subunit; SMART: AAA ATPase YP_005280240.1 KEGG: sbc:SbBS512_E4204 transcriptional regulator PhoU; TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein YP_005280241.1 PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: eoi:ECO111_4551 transcriptional antiterminator BglG YP_005280242.1 manually curated; TIGRFAM: PTS system, beta-glucoside-specific IIABC subunit; PTS system, glucose-like IIB subunint; PTS system, maltose and glucose-specific subfamily, IIC subunit; PTS system, glucose subfamily, IIA subunit; KEGG: efe:EFER_4020 PTS system beta-glucoside-specific transporter subunits IIABC; PFAM: sugar-specific permease EIIA 1 domain; phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site YP_005280243.1 PFAM: glycoside hydrolase family 1; KEGG: eoi:ECO111_4548 cryptic phospho-beta-glucosidase B YP_005280244.1 PFAM: porin LamB type; KEGG: eoi:ECO111_4547 carbohydrate-specific outer membrane porin, cryptic YP_005280245.1 PFAM: glycoside hydrolase family 13 domain protein; esterase; KEGG: eoh:ECO103_4439 putative xylanase YP_005280246.1 PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: ebd:ECBD_4314 putative 6-phosphogluconolactonase YP_005280247.1 PFAM: protein of unknown function UPF0167; KEGG: ebd:ECBD_4315 protein of unknown function UPF0167 YP_005280248.1 KEGG: eoh:ECO103_4442 putative inner membrane protein YP_005280249.1 KEGG: ebd:ECBD_4317 6-phosphogluconate phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_005280250.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: ebd:ECBD_4318 xanthine/uracil/vitamin C permease YP_005280251.1 PFAM: NADPH-dependent FMN reductase; KEGG: sfv:SFV_3798 hypothetical protein YP_005280252.1 KEGG: eoh:ECO103_4446 putative phosphopantetheinyl transferase YP_005280253.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sbc:SbBS512_E4211 DNA-binding transcriptional regulator YidZ YP_005280254.1 PFAM: major facilitator superfamily MFS_1; KEGG: eoh:ECO103_4448 multidrug efflux system protein MdtL YP_005280255.1 KEGG: sbo:SBO_3666 tryptophan permease TnaB; TIGRFAM: aromatic amino acid transporter; PFAM: Tryptophan/tyrosine permease YP_005280256.1 TIGRFAM: tryptophanase; KEGG: sfv:SFV_3805 tryptophanase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase YP_005280257.1 manually curated; TIGRFAM: tryptophanase leader peptide; KEGG: efe:EFER_4509 tryptophanase leader peptide; PFAM: tryptophanese operon leader peptide YP_005280258.1 KEGG: ebd:ECBD_4326 tRNA modification GTPase TrmE; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related YP_005280259.1 KEGG: ssn:SSON_3656 putative inner membrane protein translocase component YidC; TIGRFAM: membrane protein insertase, YidC/Oxa1 family domain containing; membrane protein insertase, YidC/Oxa1 family; PFAM: 60 kDa inner membrane insertion protein YP_005280260.1 KEGG: sdy:SDY_4187 hypothetical protein; manually curated; PFAM: protein of unknown function DUF37 YP_005280261.1 manually curated; TIGRFAM: ribonuclease P protein component; KEGG: sdy:SDY_4186 ribonuclease P; PFAM: ribonuclease P protein YP_005280262.1 KEGG: pam:PANA_0091 RpmH; TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34 YP_005280263.1 PFAM: mobilisation protein; KEGG: eoj:ECO26_p3-3 putative mobilization protein 2 YP_005280264.1 PFAM: Relaxase/mobilization nuclease family protein; KEGG: eoj:ECO26_p3-4 mobilization protein MbeA YP_005280265.1 KEGG: pcr:Pcryo_2488 hypothetical protein YP_005280266.1 KEGG: pcr:Pcryo_2487 hypothetical protein YP_005280267.1 KEGG: nve:NEMVE_v1g137021 hypothetical protein YP_005280268.1 PFAM: regulatory protein Rop; KEGG: rcu:RCOM_2091210 Regulatory protein rop, putative YP_005280269.1 KEGG: eoh:ECO103_3781 hypothetical protein YP_005280270.1 PFAM: IS66 Orf2 family protein; KEGG: eoj:ECO26_1299 hypothetical protein YP_005280271.1 KEGG: eoh:ECO103_3783 hypothetical protein YP_005280272.1 KEGG: seh:SeHA_A0025 hypothetical protein YP_005280273.1 KEGG: pap:PSPA7_5067 putative tail tape measure protein YP_005280274.1 KEGG: seh:SeHA_A0026 hypothetical protein YP_005280275.1 KEGG: seh:SeHA_A0027 hypothetical protein YP_005280276.1 KEGG: efe:pEFER_0055 conserved hypothetical protein, putative helix-turn-helix, fis-type YP_005280277.1 KEGG: kpu:pK2044_00670 hypothetical protein YP_005280278.1 PFAM: integrase family protein; KEGG: seh:SeHA_A0031 resolvase YP_005280279.1 KEGG: seh:SeHA_A0032 ParA protein homolog YP_005280280.1 KEGG: seh:SeHA_A0033 putative 60 kDa chaperonin YP_005280281.1 PFAM: StbA family protein; KEGG: seh:SeHA_A0034 plasmid segregation protein ParM YP_005280282.1 PFAM: Plasmid stability protein, StbB; KEGG: seh:SeHA_A0035 plasmid stability protein YP_005280283.1 KEGG: seh:SeHA_A0036 DNA polymerase V subunit UmuC; PFAM: UMUC domain protein DNA-repair protein YP_005280284.1 PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: seh:SeHA_A0037 protein ImpA YP_005280285.1 PFAM: DinI family protein; KEGG: seh:SeHA_A0038 protein ImpC YP_005280286.1 manually curated; KEGG: mpa:MAP1687 hypothetical protein YP_005280287.1 PFAM: protein of unknown function DUF1281; KEGG: sfl:CP0196 hypothetical protein YP_005280288.1 manually curated; KEGG: sec:SC131 hypothetical protein YP_005280289.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: sfl:CP0198 putative methylase YP_005280290.1 KEGG: eok:G2583_pO550161 hypothetical protein YP_005280291.1 KEGG: eoj:ECO26_p1-57 conserved predicted protein YP_005280292.1 KEGG: etw:ECSP_6047 hypothetical protein YP_005280293.1 PFAM: Antirestriction protein; KEGG: eoj:ECO26_p2-16 putative antirestriction protein YP_005280294.1 KEGG: eok:G2583_pO550002 YcjA YP_005280295.1 KEGG: sec:SC124 hypothetical protein YP_005280296.1 KEGG: sec:SC120 single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n YP_005280297.1 PFAM: protein of unknown function DUF905; KEGG: sec:SC119 YkfF YP_005280298.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: seh:SeHA_A0053 ParB-like partition protein; SMART: ParB domain protein nuclease YP_005280299.1 PFAM: plasmid SOS inhibition protein; KEGG: seh:SeHA_A0054 plasmid SOS inhibition protein B YP_005280300.1 PFAM: PsiA family protein; KEGG: seh:SeHA_A0055 plasmid SOS inhibition protein A YP_005280301.1 KEGG: seh:SeHA_A0056 hypothetical protein YP_005280302.1 KEGG: sec:SC114 anti-restriction protein; manually curated; PFAM: protein of unknown function DUF1472 YP_005280303.1 PFAM: Antirestriction ArdA family protein; KEGG: sec:SC114 anti-restriction protein YP_005280304.1 KEGG: ebd:ECBD_4284 integrase catalytic region; manually curated; PFAM: Integrase catalytic region YP_005280305.1 KEGG: sfx:S1483 IS103 orf YP_005280306.1 KEGG: sec:SC111 YdfA YP_005280307.1 KEGG: seh:SeHA_A0064 hypothetical protein YP_005280308.1 PFAM: transposase YhgA family protein; KEGG: sec:SC108 putative YhgA-like transposase YP_005280309.1 KEGG: eoj:ECO26_p1-67 hypothetical protein YP_005280310.1 KEGG: seh:SeHA_A0067 hypothetical protein YP_005280311.1 KEGG: sec:SC102 YdiA YP_005280312.1 KEGG: eoj:ECO26_p1-71 probable mobilization protein MobC YP_005280313.1 manually curated; KEGG: seh:SeHA_A0073 relaxosome component YP_005280314.1 PFAM: Relaxase/mobilization nuclease family protein; KEGG: seh:SeHA_A0074 putative relaxase/mobilization nuclease domain protein YP_005280315.1 KEGG: seh:SeHA_A0075 TrbC YP_005280316.1 KEGG: seh:SeHA_A0076 TrbB YP_005280317.1 KEGG: seh:SeHA_A0077 conjugal transfer protein YP_005280318.1 KEGG: pfh:PFHG_03201 conserved hypothetical protein YP_005280319.1 KEGG: sec:SC083 hypothetical protein YP_005280320.1 KEGG: seh:SeHA_A0080 hypothetical protein YP_005280321.1 KEGG: sgl:SG0681 hemolysin expression-modulating protein; manually curated; PFAM: Haemolysin expression modulating family protein YP_005280322.1 KEGG: seh:SeHA_A0083 surface exclusion protein YP_005280323.1 manually curated; KEGG: sec:SC079 integral membrane protein YP_005280324.1 KEGG: seh:SeHA_A0085 TraX YP_005280325.1 KEGG: sec:SC077 lipoprotein YP_005280326.1 KEGG: seh:SeHA_A0087 TraV YP_005280327.1 KEGG: seh:SeHA_A0088 TraU YP_005280328.1 KEGG: seh:SeHA_A0089 hypothetical protein YP_005280329.1 KEGG: seh:SeHA_A0090 hypothetical protein YP_005280330.1 KEGG: seh:SeHA_A0091 TraR YP_005280331.1 KEGG: seh:SeHA_A0092 TraQ YP_005280332.1 KEGG: seh:SeHA_A0093 TraP YP_005280333.1 KEGG: sec:SC069 TraO-like protein YP_005280334.1 KEGG: seh:SeHA_A0095 TraN YP_005280335.1 KEGG: sec:SC071 TraM-like protein YP_005280336.1 KEGG: seh:SeHA_A0097 TraL YP_005280337.1 KEGG: seh:SeHA_A0098 DNA primase; PFAM: TOPRIM domain-containing protein; SMART: Toprim sub domain-containing protein YP_005280338.1 KEGG: seh:SeHA_A0099 phospholipase D (PLD) family protein YP_005280339.1 KEGG: seh:SeHA_A0100 TraK YP_005280340.1 KEGG: seh:SeHA_A0102 lipoprotein YP_005280341.1 KEGG: seh:SeHA_A0103 lipoprotein YP_005280342.1 PFAM: Phosphoglycerate mutase; KEGG: seh:SeHA_A0105 TraG YP_005280343.1 KEGG: seh:SeHA_A0106 TraF YP_005280344.1 KEGG: seh:SeHA_A0107 TraE YP_005280345.1 KEGG: seh:SeHA_A0109 shufflon protein B' YP_005280346.1 PFAM: peptidase A24A prepilin type IV; KEGG: seh:SeHA_A0110 prepilin peptidase YP_005280347.1 PFAM: Lytic transglycosylase catalytic; KEGG: seh:SeHA_A0111 lytic transglycosylase PilT YP_005280348.1 PFAM: PilS domain-containing protein; KEGG: seh:SeHA_A0112 typeIV prepilin YP_005280349.1 PFAM: Type II secretion system F domain; KEGG: seh:SeHA_A0113 integral membrane protein YP_005280350.1 PFAM: type II secretion system protein E; KEGG: seh:SeHA_A0114 ATP-binding protein YP_005280351.1 TIGRFAM: type IV pilus biogenesis protein PilP; KEGG: seh:SeHA_A0115 type IV pilus biogenesis protein PilP YP_005280352.1 KEGG: seh:SeHA_A0116 PilO protein YP_005280353.1 KEGG: seh:SeHA_A0117 type IVB pilus formation outer membrane protein, R64 PilN family; TIGRFAM: type IVB pilus formation outer membrane protein, R64 PilN family; PFAM: Secretin domain protein; type II and III secretion system protein YP_005280354.1 KEGG: seh:SeHA_A0118 PilM protein YP_005280355.1 KEGG: seh:SeHA_A0119 PilL protein YP_005280356.1 KEGG: seh:SeHA_A0120 PilK protein YP_005280357.1 PFAM: Plasmid conjugative transfer protein PilI; KEGG: seh:SeHA_A0125 hypothetical protein YP_005280358.1 KEGG: seh:SeHA_A0127 hypothetical protein YP_005280359.1 KEGG: eoj:ECO26_p1-23 transfer protein B; PFAM: NGN domain-containing protein; SMART: NGN domain-containing protein YP_005280360.1 KEGG: seh:SeHA_A0131 TraA; PFAM: Sigma-70 region 4 type 2; SMART: regulatory protein LuxR YP_005280361.1 KEGG: seh:SeHA_A0002 replication initiation protein YP_005280362.1 KEGG: sdy:SDY_P087 hypothetical protein YP_005280363.1 PFAM: plasmid stabilization system; KEGG: etw:ECSP_6086 hypothetical protein YP_005280364.1 KEGG: xca:xccb100_1412 putative transporter-like membrane protein YP_005280365.1 KEGG: seh:SeHA_A0011 hypothetical protein YP_005280366.1 KEGG: seh:SeHA_A0012 hypothetical protein YP_005280367.1 PFAM: Fertility inhibition FinO-like; KEGG: seh:SeHA_A0013 YafB YP_005280368.1 KEGG: seh:SeHA_A0015 YagA YP_005280369.1 PFAM: transposase; KEGG: sfx:S1497 IS91 orf YP_005280370.1 KEGG: eoj:ECO26_p1-83 hypothetical protein YP_005280371.1 PFAM: P pili regulatory PapB protein; KEGG: sec:SCV23 major pilu subunit operon regulatory protein PapB YP_005280372.1 KEGG: sew:SeSA_A4578 K88 fimbrial protein A YP_005280373.1 PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: sew:SeSA_A4579 CshB porin YP_005280374.1 PFAM: Pili assembly chaperone, N-terminal; Pili assembly chaperone, C-terminal; KEGG: sew:SeSA_A4580 chaperone protein ClpE YP_005280375.1 KEGG: sew:SeSA_A4581 K88 minor fimbrial protein FaeF YP_005280376.1 PFAM: Fimbrial major/minor subunit; KEGG: eta:ETA_01640 K88 fimbrial protein AC precursor YP_005280377.1 KEGG: kpe:KPK_A0163 hypothetical protein YP_005280379.1 KEGG: pmr:PMI3491 plasmid-related protein YP_005280380.1 KEGG: enc:ECL_A049 hypothetical protein YP_005280381.1 KEGG: kpu:pK2044_01240 hypothetical protein YP_005280382.1 KEGG: enc:ECL_A054 hypothetical protein