-- dump date 20140619_065619 -- class Genbank::CDS -- table cds_note -- id note YP_002351956.1 KEGG: dth:DICTH_1702 chromosomal replication initiator protein DnaA; TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA domain; Chromosomal replication initiator DnaA; SMART: ATPase AAA YP_002351957.1 TIGRFAM: HflC protein; PFAM: band 7 protein; KEGG: dth:DICTH_1703 HflC protein YP_002351958.1 TIGRFAM: HflK protein; PFAM: band 7 protein; KEGG: dth:DICTH_1704 HflK protein YP_002351959.1 KEGG: dth:DICTH_1705 hypothetical protein YP_002351960.1 PFAM: PEGA domain protein; KEGG: dth:DICTH_1706 hypothetical protein YP_002351961.1 KEGG: dth:DICTH_1707 sensory box/GGDEF domain protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein YP_002351962.1 KEGG: dth:DICTH_1708 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TIGRFAM: phosphonopyruvate decarboxylase-related protein; PFAM: metalloenzyme domain protein YP_002351963.1 KEGG: dth:DICTH_1712 hypothetical protein YP_002351964.1 KEGG: hau:Haur_2878 ABC transporter YP_002351965.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: hau:Haur_2877 ABC transporter YP_002351966.1 PFAM: Rubrerythrin; Ferritin Dps family protein; KEGG: dth:DICTH_1716 ferritin and Dps YP_002351967.1 PFAM: CobB/CobQ domain protein glutamine amidotransferase; KEGG: dth:DICTH_1717 cobyric acid synthase CobQ YP_002351968.1 PFAM: Mur ligase middle domain protein; domain of unknown function DUF1727; KEGG: dth:DICTH_1718 Mur ligase family protein YP_002351969.1 catalyzes the magnesium and ATP-dependent positive supercoiling of DNA; contains helicase and topoisomerase domains YP_002351970.1 KEGG: dth:DICTH_1720 DNA replication and repair protein RecF, putative; TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; SMART: ATPase AAA YP_002351971.1 PFAM: GrpE protein; KEGG: dth:DICTH_1721 co-chaperone GrpE YP_002351972.1 KEGG: dth:DICTH_1722 chaperone protein DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70 YP_002351973.1 TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ central domain protein; heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: dth:DICTH_1724 chaperone protein DnaJ YP_002351974.1 KEGG: dth:DICTH_1725 hypothetical protein YP_002351975.1 KEGG: dth:DICTH_1726 LexA repressor; TIGRFAM: LexA repressor; PFAM: LexA DNA-binding domain protein; peptidase S24 and S26 domain protein YP_002351976.1 PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: dth:DICTH_1727 glycerol-3-phosphate dehydrogenase, glpa YP_002351977.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: dth:DICTH_1728 NAD(FAD)-dependent dehydrogenase YP_002351978.1 PFAM: protein of unknown function DUF1667; KEGG: dth:DICTH_1729 hypothetical protein YP_002351979.1 PFAM: major facilitator superfamily MFS_1; KEGG: dth:DICTH_1681 transporter, major facilitator family YP_002351980.1 PFAM: glutamine amidotransferase class-II; KEGG: dth:DICTH_0167 glutamate synthase domain 1 YP_002351981.1 PFAM: glutamate synthase alpha subunit domain protein; KEGG: dth:DICTH_0171 glutamate synthase domain 3 YP_002351982.1 TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: dth:DICTH_1733 cysteine synthase A YP_002351983.1 PFAM: phosphoribulokinase/uridine kinase; SMART: ATPase AAA; KEGG: dth:DICTH_1732 uridine kinase YP_002351984.1 KEGG: dth:DICTH_1734 hypothetical protein YP_002351985.1 PFAM: chaperonin Cpn10; KEGG: dth:DICTH_1735 chaperonin GroS YP_002351986.1 TIGRFAM: glutaredoxin-like protein, YruB-family; PFAM: glutaredoxin; KEGG: dth:DICTH_1736 hypothetical protein YP_002351987.1 KEGG: dth:DICTH_1737 fructose-1,6-bisphosphate aldolase, class II; TIGRFAM: ketose-bisphosphate aldolase; fructose-1,6-bisphosphate aldolase, class II; PFAM: ketose-bisphosphate aldolase class-II YP_002351988.1 PFAM: xylose isomerase; SMART: AP endonuclease family 2; KEGG: dth:DICTH_1738 hypothetical protein YP_002351989.1 KEGG: dth:DICTH_1740 hypothetical protein YP_002351990.1 PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; KEGG: dth:DICTH_1739 cob(I)alamin adenosyltransferase YP_002351991.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate YP_002351992.1 PFAM: aminotransferase class V; KEGG: dth:DICTH_1742 soluble hydrogenase, small subunit YP_002351993.1 KEGG: dth:DICTH_1743 carbonic anhydrases/acetyltransferase, isoleucine patch superfamily YP_002351994.1 PFAM: protein of unknown function DUF583; KEGG: dth:DICTH_1744 hypothetical protein YP_002351995.1 PFAM: peptidase M23; KEGG: dth:DICTH_1745 peptidase, M23/M37 family YP_002351996.1 KEGG: dth:DICTH_1746 hypothetical protein YP_002351997.1 KEGG: dth:DICTH_1747 hypothetical protein YP_002351998.1 KEGG: dth:DICTH_1749 hypothetical protein YP_002351999.1 PFAM: transglutaminase domain protein; KEGG: dth:DICTH_1748 hypothetical protein YP_002352000.1 PFAM: protein of unknown function DUF58; KEGG: dth:DICTH_1750 hypothetical protein YP_002352001.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: dth:DICTH_1751 methanol dehydrogenase regulatory protein YP_002352002.1 KEGG: dth:DICTH_1752 hypothetical protein YP_002352003.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: dth:DICTH_1753 RNA polymerase sigma-70 factor, putative YP_002352004.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis YP_002352005.1 KEGG: dth:DICTH_1755 hypothetical protein YP_002352006.1 KEGG: dth:DICTH_1756 glucose-6-phosphate 1-dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase YP_002352007.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: dth:DICTH_1757 muconate cycloisomerase YP_002352008.1 KEGG: dth:DICTH_1758 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: mannose-6-phosphate isomerase type II; nucleotidyl transferase; Cupin 2 conserved barrel domain protein YP_002352009.1 TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; PhoU family protein; KEGG: dth:DICTH_1759 sodium-dependent phosphate transport protein YP_002352010.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: dth:DICTH_1760 3-beta hydroxysteroid dehydrogenase/isomerase family YP_002352011.1 PFAM: regulatory protein TetR; KEGG: dth:DICTH_1761 TetR family transcriptional regulator protein YP_002352012.1 TIGRFAM: AbrB family transcriptional regulator; PFAM: SpoVT/AbrB domain protein; KEGG: dth:DICTH_1762 AbrB family transcriptional regulator YP_002352013.1 KEGG: dth:DICTH_1763 ABC transporter, ATP binding protein; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter; SMART: ATPase AAA YP_002352014.1 PFAM: ABC transporter; KEGG: dth:DICTH_1764 ABC transporter YP_002352015.1 KEGG: dth:DICTH_1765 hypothetical protein YP_002352016.1 TIGRFAM: molybdenum cofactor synthesis domain protein; competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; KEGG: dth:DICTH_1766 competence-damage inducible protein YP_002352017.1 KEGG: dth:DICTH_1767 sensory box protein; TIGRFAM: metal dependent phophohydrolase; PFAM: GAF domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_002352018.1 KEGG: dth:DICTH_1768 thermostable carboxypeptidase 1; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_002352019.1 PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: dth:DICTH_1769 phosphomannomutase/phosphoglucomutase YP_002352020.1 KEGG: dth:DICTH_1770 hypothetical protein YP_002352021.1 KEGG: dth:DICTH_1771 hypothetical protein YP_002352022.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Bacterio-opsin activator HTH domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: dth:DICTH_1772 RNA polymerase ECF-type sigma factor YP_002352023.1 PFAM: glycosyl transferase family 2; KEGG: dth:DICTH_1773 minor teichoic acid biosynthesis protein GgaA, putative YP_002352024.1 PFAM: phosphatidate cytidylyltransferase; protein of unknown function DUF205; KEGG: dth:DICTH_1774 protein of unknown function, putative YP_002352025.1 PFAM: homocysteine S-methyltransferase; KEGG: dth:DICTH_1778 5-methyltetrahydrofolate-homocysteine methyltransferase YP_002352026.1 plays a role in hydrogenase nickel cofactor insertion YP_002352027.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: dth:DICTH_1780 ATPase involved in chromosome partitioning, MinD/MRP superfamily YP_002352028.1 PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase Fe4S4 region; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: dth:DICTH_1781 FdhB-II protein YP_002352029.1 PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: dth:DICTH_1782 NAD-reducing hydrogenase HoxS delta subunit YP_002352030.1 PFAM: nickel-dependent hydrogenase large subunit; KEGG: dth:DICTH_1783 NAD-reducing hydrogenase HoxS beta subunit YP_002352031.1 TIGRFAM: hydrogenase maturation protease; KEGG: dth:DICTH_1784 HoxW protein YP_002352032.1 TIGRFAM: [NiFe] hydrogenase maturation protein HypF; PFAM: acylphosphatase; SUA5/yciO/yrdC domain; zinc finger HypF domain protein; KEGG: dth:DICTH_1785 [NiFe] hydrogenase maturation protein HypF YP_002352033.1 PFAM: glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: dth:DICTH_1786 beta-galactosidase YP_002352034.1 PFAM: extracellular solute-binding protein family 5; KEGG: tma:TM1199 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein YP_002352035.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: trq:TRQ2_1620 binding-protein-dependent transport systems inner membrane component YP_002352036.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: trq:TRQ2_1621 binding-protein-dependent transport systems inner membrane component YP_002352037.1 KEGG: tma:TM1196 oligopeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_002352038.1 KEGG: tma:TM1194 oligopeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_002352039.1 KEGG: ote:Oter_0026 inosine/uridine-preferring nucleoside hydrolase YP_002352040.1 TIGRFAM: hydrogenase assembly chaperone hypC/hupF; PFAM: hydrogenase expression/formation protein (HUPF/HYPC); KEGG: dth:DICTH_1788 hydrogenase assembly chaperone HypC/HupF YP_002352041.1 TIGRFAM: hydrogenase expression/formation protein HypD; PFAM: hydrogenase formation HypD protein; KEGG: dth:DICTH_1789 hydrogenase expression/formation protein HypD YP_002352042.1 TIGRFAM: hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: dth:DICTH_1790 hydrogenase expression/formation protein HypE YP_002352043.1 KEGG: dth:DICTH_1794 hypothetical protein YP_002352044.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF362; KEGG: dth:DICTH_1795 hypothetical protein YP_002352045.1 PFAM: ABC transporter; KEGG: dth:DICTH_1796 ABC transporter family YP_002352046.1 PFAM: ABC transporter; KEGG: dth:DICTH_1797 ABC transporter family YP_002352047.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dth:DICTH_1798 ABC transporter, ATP-binding protein YP_002352048.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: dth:DICTH_1801 ribosomal small subunit pseudouridine synthase A YP_002352049.1 KEGG: dth:DICTH_1802 beta-mannanase/endoglucanase A YP_002352050.1 KEGG: dth:DICTH_1805 hypothetical protein YP_002352051.1 PFAM: protein of unknown function UPF0175; KEGG: ava:Ava_1083 hypothetical protein YP_002352052.1 KEGG: tpd:Teth39_0043 nucleic acid binding protein YP_002352053.1 PFAM: HEPN domain protein; KEGG: dth:DICTH_0228 hypothetical protein YP_002352054.1 PFAM: DNA polymerase beta domain protein region; KEGG: dth:DICTH_0227 nucleotidyltransferase domain, putative YP_002352056.1 KEGG: dth:DICTH_1810 hypothetical protein YP_002352057.1 KEGG: dth:DICTH_0203 hypothetical protein YP_002352058.1 KEGG: dth:DICTH_0212 hypothetical protein YP_002352059.1 KEGG: dth:DICTH_1834 hypothetical protein YP_002352060.1 KEGG: dth:DICTH_1837 hypothetical protein YP_002352061.1 KEGG: dth:DICTH_1839 fibronectin type III domain protein YP_002352062.1 PFAM: Bacitracin resistance protein BacA; KEGG: dth:DICTH_1843 undecaprenyl-diphosphatase YP_002352063.1 TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Miro domain protein; KEGG: dth:DICTH_1844 tRNA modification GTPase TrmE YP_002352064.1 PFAM: single-stranded nucleic acid binding R3H domain protein; KEGG: dth:DICTH_1845 conserved protein, JAG-family YP_002352065.1 PFAM: hypothetical protein; KEGG: dth:DICTH_1846 sporulation associated-membrane protein YP_002352066.1 PFAM: protein of unknown function DUF37; KEGG: dth:DICTH_1847 hypothetical protein YP_002352067.1 TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: dth:DICTH_1848 ribonuclease P protein component YP_002352068.1 in Escherichia coli transcription of this gene is enhanced by polyamines YP_002352069.1 PFAM: Quinolinate phosphoribosyl transferase; Nicotinate phosphoribosyltransferase-like; KEGG: dth:DICTH_1850 nicotinate-nucleotide pyrophosphorylase YP_002352070.1 PFAM: isochorismatase hydrolase; KEGG: dth:DICTH_1851 isochorismatase YP_002352072.1 PFAM: protein of unknown function UPF0047; KEGG: dth:DICTH_1852 hypothetical protein YP_002352073.1 PFAM: protein of unknown function UPF0027; KEGG: dth:DICTH_1853 RtcB protein YP_002352074.1 PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: dth:DICTH_1857 transcriptional antiterminator of glycerol uptake operon YP_002352075.1 TIGRFAM: ATP synthase F1 subunit epsilon; PFAM: H+transporting two-sector ATPase delta/epsilon subunit; KEGG: dth:DICTH_1856 ATP synthase F1 subunit epsilon YP_002352076.1 KEGG: dth:DICTH_1858 ATP synthase F1 subunit beta; TIGRFAM: ATP synthase F1 subunit beta; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: ATPase AAA YP_002352077.1 KEGG: dth:DICTH_1859 ATP synthase F1 subunit gamma; TIGRFAM: ATP synthase F1 subunit gamma; PFAM: H+transporting two-sector ATPase gamma subunit YP_002352078.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit YP_002352079.1 TIGRFAM: ATP synthase F0 subunit B; PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: dth:DICTH_1861 ATP synthase B chain, sodium ion specific YP_002352080.1 PFAM: H+transporting two-sector ATPase C subunit; KEGG: dth:DICTH_1862 ATP synthase C chain YP_002352081.1 TIGRFAM: ATP synthase F0 subunit A; PFAM: H+transporting two-sector ATPase A subunit; KEGG: dth:DICTH_1863 ATP synthase F0 subunit A YP_002352082.1 KEGG: dth:DICTH_1864 hypothetical protein YP_002352083.1 KEGG: dth:DICTH_1865 hypothetical protein YP_002352084.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: dth:DICTH_1866 23S rRNA methyltransferase YP_002352085.1 KEGG: dth:DICTH_1867 conserved cytosolic protein YP_002352086.1 PFAM: histone deacetylase superfamily; KEGG: dth:DICTH_1869 histone deacetylase superfamily YP_002352087.1 PFAM: protein of unknown function UPF0029; KEGG: dth:DICTH_1870 thymidylate synthase YP_002352088.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: dth:DICTH_1871 serine protease YP_002352089.1 KEGG: dth:DICTH_1872 hydrolase, alpha/beta fold family protein YP_002352090.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dth:DICTH_1873 nitrite reductase (NAD(P)H) large subunit YP_002352091.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: dth:DICTH_1874 rubredoxin YP_002352092.1 PFAM: OstA family protein; KEGG: dth:DICTH_1875 hypothetical protein YP_002352093.1 PFAM: permease YjgP/YjgQ family protein; KEGG: dth:DICTH_1876 putative permease, YjgP/YjgQ family YP_002352094.1 PFAM: OstA family protein; KEGG: dth:DICTH_1877 hypothetical protein YP_002352095.1 KEGG: dth:DICTH_1878 hypothetical protein YP_002352096.1 TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: dth:DICTH_1879 apolipoprotein N-acyltransferase YP_002352097.1 KEGG: dth:DICTH_1880 lipoprotein, putative YP_002352098.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: dth:DICTH_1881 sensory transduction histidine kinase YP_002352099.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: dth:DICTH_1882 response regulator ArlR YP_002352100.1 PFAM: glycosyl transferase family 2; KEGG: dth:DICTH_1884 glycosyl transferase, family 2 YP_002352101.1 PFAM: O-antigen polymerase; KEGG: dth:DICTH_0198 O-antigen polymerase family YP_002352102.1 PFAM: glycoside hydrolase family 4; KEGG: dth:DICTH_1885 alpha-glucosidase YP_002352103.1 KEGG: dth:DICTH_1886 oligopeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_002352104.1 KEGG: dth:DICTH_1887 oligopeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_002352105.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_1888 oligopeptide ABC transporter, permease protein YP_002352106.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_1889 oligopeptide ABC transporter, permease protein YP_002352107.1 PFAM: extracellular solute-binding protein family 5; KEGG: dth:DICTH_1890 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein YP_002352108.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: dth:DICTH_1891 transcriptional regulator YP_002352109.1 KEGG: dth:DICTH_1892 hypothetical protein YP_002352110.1 KEGG: dth:DICTH_1894 hypothetical protein YP_002352111.1 KEGG: dth:DICTH_1893 hypothetical protein YP_002352112.1 PFAM: iron-containing alcohol dehydrogenase; 3-dehydroquinate synthase; KEGG: dth:DICTH_1895 1,3-propanediol dehydrogenase YP_002352113.1 KEGG: dth:DICTH_1896 putative hypoxanthine phosphoribosyl transferase with additional GAF motif YP_002352114.1 KEGG: dth:DICTH_1898 hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_002352115.1 PFAM: transcriptional regulator PadR family protein; KEGG: dth:DICTH_1897 transcriptional regulator, PadR family YP_002352116.1 PFAM: glycoside hydrolase family 31; KEGG: dth:DICTH_1899 alpha-glucosidase 2 YP_002352117.1 PFAM: coagulation factor 5/8 type domain protein; KEGG: dth:DICTH_1900 F5/8 type C domain protein YP_002352118.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_1901 integral membrane protein, putative YP_002352119.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_1902 sugar ABC transporter, permease protein YP_002352120.1 PFAM: extracellular solute-binding protein family 1; KEGG: dth:DICTH_1903 putative sugar uptake sugar ABC transporter substrate-binding protein YP_002352121.1 KEGG: dth:DICTH_1904 hypothetical protein YP_002352122.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: dth:DICTH_1906 transcriptional regulator YP_002352123.1 TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: dth:DICTH_1907 glutamine synthetase, type I YP_002352124.1 PFAM: peptidase M48 Ste24p; KEGG: dth:DICTH_1908 zmpste24 YP_002352125.1 KEGG: dth:DICTH_1909 NH(3)-dependent NAD(+) synthetase; TIGRFAM: NAD+ synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD synthase; ExsB family protein YP_002352126.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase YP_002352127.1 KEGG: dth:DICTH_1912 hypothetical protein YP_002352128.1 TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain protein; KEGG: dth:DICTH_1913 histidinol phosphatase YP_002352129.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: dth:DICTH_1914 TldD/PmbA family protein YP_002352130.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: dth:DICTH_1915 TldD protein, putative YP_002352131.1 PFAM: heat shock protein Hsp20; CS; KEGG: dth:DICTH_1916 heat shock protein, class I YP_002352132.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: dth:DICTH_1917 NADH oxidase YP_002352133.1 KEGG: dth:DICTH_1919 hypothetical protein YP_002352134.1 KEGG: dth:DICTH_1920 hypothetical protein YP_002352135.1 PFAM: Chromate transporter; KEGG: dth:DICTH_1921 chromate transport protein YP_002352136.1 PFAM: Chromate transporter; KEGG: dth:DICTH_1922 chromate transport protein YP_002352137.1 KEGG: dth:DICTH_1923 hypothetical protein YP_002352138.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: dth:DICTH_1924 glyoxylate reductase YP_002352139.1 PFAM: carbohydrate kinase FGGY; KEGG: dth:DICTH_1925 sugar (pentulose and hexulose) kinase YP_002352140.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate YP_002352141.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dth:DICTH_1927 short-chain alcohol dehydrogenase YP_002352142.1 SMART: phosphoesterase PHP domain protein; KEGG: dth:DICTH_1928 putative secreted protein YP_002352143.1 PFAM: major facilitator superfamily MFS_1; KEGG: dth:DICTH_1929 permeases of the major facilitator superfamily YP_002352144.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: dth:DICTH_1930 glycerophosphoryl diester phosphodiesterase YP_002352145.1 Responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8-oxoguanine = 7-oxoG) from DNA. Also nicks DNA at apurinic/apyrimidinic sites YP_002352146.1 PFAM: sugar fermentation stimulation protein; KEGG: dth:DICTH_1932 sugar fermentation stimulation protein YP_002352147.1 TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: dth:DICTH_1933 phosphate ABC transporter, phosphate-binding protein PstS YP_002352148.1 KEGG: dth:DICTH_1934 hypothetical protein YP_002352149.1 PFAM: major facilitator superfamily MFS_1; KEGG: dth:DICTH_1935 major facilitator family protein YP_002352150.1 KEGG: dth:DICTH_1937 methyltransferase YP_002352151.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: dth:DICTH_1938 ATPases involved in chromosome partitioning YP_002352152.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: dth:DICTH_1939 stage 0 sporulation protein J YP_002352153.1 KEGG: dth:DICTH_1940 sensory box protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; metal-dependent phosphohydrolase HD sub domain; PAS fold-4 domain protein; SMART: PAS domain containing protein YP_002352154.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; KEGG: dth:DICTH_1942 phosphatase YP_002352155.1 Converts isocitrate to alpha ketoglutarate YP_002352156.1 KEGG: dth:DICTH_1943 hypothetical protein YP_002352157.1 PFAM: extracellular solute-binding protein family 5; KEGG: dth:DICTH_1944 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein YP_002352158.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_1945 oligopeptide ABC transporter, permease protein YP_002352159.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_1946 oligopeptide ABC transporter, permease protein YP_002352160.1 KEGG: dth:DICTH_1947 oligopeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_002352161.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dth:DICTH_1948 oligopeptide ABC transporter, ATP-binding protein YP_002352162.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: dth:DICTH_1949 thermostable beta-glucosidase B YP_002352163.1 KEGG: dth:DICTH_1950 hypothetical protein YP_002352164.1 PFAM: protein of unknown function DUF362; KEGG: dth:DICTH_1951 hypothetical protein YP_002352165.1 PFAM: glycoside hydrolase, family 20, catalytic core; KEGG: dth:DICTH_1952 N-acetyl-beta-hexosaminidase YP_002352166.1 KEGG: dth:DICTH_1953 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase YP_002352167.1 KEGG: dth:DICTH_1954 hypothetical protein YP_002352168.1 KEGG: dth:DICTH_1955 hypothetical protein YP_002352169.1 PFAM: extracellular solute-binding protein family 3; GAF domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: dth:DICTH_1958 GGDEF domain/hd domain protein YP_002352170.1 KEGG: dth:DICTH_1957 hypothetical protein YP_002352171.1 PFAM: alanine racemase domain protein; KEGG: dth:DICTH_1959 amino acid racemase YP_002352172.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: dth:DICTH_1960 integral membrane protein DUF6 YP_002352173.1 KEGG: dth:DICTH_1961 hypothetical protein YP_002352174.1 KEGG: dth:DICTH_1962 hypothetical protein YP_002352175.1 KEGG: dth:DICTH_1963 hypothetical protein YP_002352176.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: dth:DICTH_1964 methanol dehydrogenase regulatory protein YP_002352177.1 KEGG: dth:DICTH_1965 hypothetical protein YP_002352178.1 KEGG: dth:DICTH_1966 hypothetical protein YP_002352179.1 PFAM: von Willebrand factor A; KEGG: dth:DICTH_1967 von Willebrand factor A domain protein YP_002352180.1 PFAM: response regulator receiver; KEGG: tye:THEYE_A1490 response regulator YP_002352181.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dth:DICTH_1707 sensory box/GGDEF domain protein YP_002352182.1 PFAM: phospholipase/Carboxylesterase; KEGG: dth:DICTH_0264 phospholipase/carboxylesterase family YP_002352183.1 PFAM: glycoside hydrolase family 11; Carbohydrate binding family 6; KEGG: dth:DICTH_1968 endo-1,4-beta-xylanase A YP_002352184.1 KEGG: dth:DICTH_0201 hypothetical protein YP_002352186.1 KEGG: dth:DICTH_0201 hypothetical protein YP_002352187.1 PFAM: ABC transporter transmembrane region; ABC transporter; SMART: ATPase AAA; KEGG: dth:DICTH_1970 multidrug resistance ABC transporter ATP-binding and permease protein YP_002352188.1 PFAM: protein of unknown function UPF0066; formylmethanofuran dehydrogenase subunit E region; KEGG: dth:DICTH_1969 formylmethanofuran dehydrogenase subunit E YP_002352189.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dth:DICTH_1972 ABC-type cobalamin/Fe3+-siderophores transport system, ATPase component YP_002352190.1 PFAM: transport system permease protein; KEGG: dth:DICTH_1973 ABC-type cobalamin/Fe3+-siderophores transport system, permease component YP_002352191.1 PFAM: periplasmic binding protein; KEGG: dth:DICTH_1974 ABC-type Fe3+-siderophores transport system, periplasmic component YP_002352192.1 PFAM: response regulator receiver; PAS fold domain protein; SMART: PAS domain containing protein; KEGG: dth:DICTH_1976 response regulator receiver sensor signal transduction histidine kinase YP_002352193.1 KEGG: dth:DICTH_1975 sensory box protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region YP_002352194.1 KEGG: dth:DICTH_1977 hypothetical protein YP_002352195.1 KEGG: dth:DICTH_1978 hypothetical protein YP_002352196.1 TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, beta subunit; PFAM: t-RNA-binding domain protein; tRNA synthetase class I (M); KEGG: dth:DICTH_1979 methionyl-tRNA synthetase YP_002352197.1 KEGG: dth:DICTH_1980 DNA polymerase III subunit gamma/tau; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: ATPase AAA; SMART: ATPase AAA YP_002352198.1 PFAM: conserved hypothetical protein; KEGG: dth:DICTH_1981 hypothetical protein YP_002352199.1 KEGG: dth:DICTH_1982 recombination protein RecR; TIGRFAM: recombination protein RecR; PFAM: helix-hairpin-helix motif; TOPRIM domain protein; Zinc finger C4-type, RecR; SMART: Helix-hairpin-helix DNA-binding class 1; Toprim sub domain protein YP_002352200.1 KEGG: dth:DICTH_1983 pyruvate synthase subunit PorC; TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase YP_002352201.1 TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dth:DICTH_1984 ketoisovalerate oxidoreductase subunit VorD YP_002352202.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain protein; KEGG: dth:DICTH_1985 pyruvate synthase subunit PorA YP_002352203.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: dth:DICTH_1986 PorB subunit of pyruvate:flavodoxin oxidoreductase YP_002352204.1 KEGG: dth:DICTH_1988 endonuclease IV; TIGRFAM: apurinic endonuclease Apn1; PFAM: xylose isomerase; SMART: AP endonuclease family 2 YP_002352205.1 PFAM: Acetyl xylan esterase; KEGG: dth:DICTH_1987 xylan esterase 1 YP_002352206.1 PFAM: beta-lactamase domain protein; KEGG: dth:DICTH_1606 histidine kinase, putative YP_002352207.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: dth:DICTH_1989 potassium uptake protein KtrA YP_002352208.1 KEGG: dth:DICTH_1990 V-type sodium ATP synthase subunit J (Na(+)-translocating ATPase subunit J); TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter YP_002352209.1 KEGG: dth:DICTH_0001 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_002352210.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase YP_002352211.1 PFAM: amino acid-binding ACT domain protein; MgtC/SapB transporter; KEGG: dth:DICTH_0003 MgtC family protein YP_002352212.1 PFAM: beta-lactamase domain protein; KEGG: dth:DICTH_0004 metallo-beta-lactamase superfamily protein YP_002352213.1 PFAM: extracellular solute-binding protein family 5; KEGG: dth:DICTH_0005 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein YP_002352214.1 PFAM: methyltransferase small; methyltransferase type 11; methyltransferase type 12; Tellurite resistance methyltransferase, TehB, core; KEGG: dth:DICTH_0006 hypothetical protein YP_002352215.1 PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: dth:DICTH_0007 tetratricopeptide repeat domain protein YP_002352216.1 PFAM: glycoside hydrolase family 5; KEGG: dth:DICTH_0008 endoglucanase H YP_002352217.1 PFAM: glycoside hydrolase family 26; Carbohydrate binding family 6; KEGG: dth:DICTH_0009 mannan endo-1,4-beta-mannosidase YP_002352218.1 KEGG: dth:DICTH_0011 flavodoxin YP_002352219.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: dth:DICTH_0012 cobalt/zinc/cadmium cation efflux pump protein YP_002352220.1 PFAM: radical SAM protein; radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dth:DICTH_0013 radical SAM YP_002352222.1 KEGG: npu:Npun_R2901 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_002352223.1 PFAM: histidine kinase A domain protein; KEGG: cth:Cthe_0083 serine phosphatase YP_002352224.1 PFAM: polysaccharide deacetylase; KEGG: dth:DICTH_0130 polysaccharide deacetylase domain protein YP_002352225.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dth:DICTH_0325 bacilysin biosynthesis oxidoreductase BacC YP_002352226.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: dth:DICTH_1949 thermostable beta-glucosidase B YP_002352227.1 PFAM: protein of unknown function UPF0047; KEGG: dth:DICTH_0014 hypothetical protein YP_002352228.1 PFAM: hypothetical protein; KEGG: pmo:Pmob_1605 auxin efflux carrier YP_002352229.1 PFAM: extracellular solute-binding protein family 5; KEGG: dth:DICTH_0022 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein YP_002352230.1 KEGG: dth:DICTH_0023 hypothetical protein YP_002352231.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dth:DICTH_0024 ABC transporter, ATP-binding protein YP_002352232.1 KEGG: dth:DICTH_0025 hypothetical protein YP_002352233.1 PFAM: glycosyl transferase group 1; KEGG: dth:DICTH_0026 putative glycosyl transferase YP_002352234.1 PFAM: conserved hypothetical protein; KEGG: dth:DICTH_0027 tricarboxylate-binding protein YP_002352235.1 KEGG: dth:DICTH_0028 hypothetical protein YP_002352236.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: dth:DICTH_0029 tricarboxylate transport membrane protein RctA YP_002352237.1 KEGG: dth:DICTH_0030 hypothetical protein YP_002352238.1 PFAM: oxidoreductase domain protein; KEGG: dth:DICTH_0031 oxidoreductase family, NAD-binding Rossmann fold protein YP_002352239.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: dth:DICTH_0032 trap dicarboxylate transporter, dCTP subunit, putative YP_002352240.1 KEGG: dth:DICTH_0033 hypothetical protein YP_002352241.1 PFAM: ferredoxin-dependent glutamate synthase; KEGG: dth:DICTH_0034 glutamate synthase domain protein YP_002352242.1 KEGG: dth:DICTH_0035 hypothetical protein YP_002352243.1 KEGG: dth:DICTH_0036 hypothetical protein YP_002352244.1 PFAM: sodium/calcium exchanger membrane region; KEGG: dth:DICTH_0037 putative K+-dependent Na+/Ca+ exchanger YP_002352245.1 KEGG: dth:DICTH_1557 hypothetical protein YP_002352246.1 PFAM: extracellular solute-binding protein family 1; KEGG: dth:DICTH_0038 polysaccharide ABC transporter substrate-binding protein YP_002352247.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0039 transmembrane lipoprotein YP_002352248.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0040 transmembrane lipoprotein YP_002352249.1 PFAM: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: dth:DICTH_0042 two-component response regulator YP_002352250.1 PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); KEGG: dth:DICTH_0043 tissue alpha-L-fucosidase YP_002352251.1 PFAM: HEPN domain protein; KEGG: dth:DICTH_0449 HEPN domain, putative YP_002352252.1 PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_4420 DNA polymerase beta subunit YP_002352253.1 KEGG: mar:MAE_14610 hypothetical protein YP_002352254.1 catalyzes the transfer of alpha-xylosyl residue from alpha-xyloside to xylose, glucose, mannose, fructose, maltose, isomaltose, nigerose, kojibiose, sucrose, and trehalose; shows higher activity against alpha-xylosyl fluoride, isoprimeverose (6-O-alpha-xylopyranosyl-glucopyranose), and alpha-xyloside in xyloglucan oligosaccharides YP_002352255.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: dth:DICTH_0047 glucan 1,4-beta-glucosidase YP_002352256.1 KEGG: dth:DICTH_0049 hypothetical protein YP_002352257.1 KEGG: dth:DICTH_0052 hypothetical protein YP_002352258.1 PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dth:DICTH_0131 radical SAM domain protein YP_002352259.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: dth:DICTH_0328 dTDP-4-dehydrorhamnose reductase YP_002352260.1 KEGG: dth:DICTH_0053 hypothetical protein YP_002352261.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: dth:DICTH_0054 flavodoxin YP_002352262.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: dth:DICTH_0069 alcohol dehydrogenase II YP_002352263.1 PFAM: glycosyl transferase family 2; KEGG: dth:DICTH_0070 hypothetical protein YP_002352264.1 PFAM: protein of unknown function DUF205; KEGG: dth:DICTH_0071 hypothetical membrane protein YP_002352265.1 PFAM: glycosyl transferase family 2; KEGG: dth:DICTH_0073 hypothetical protein YP_002352266.1 PFAM: protein of unknown function DUF205; KEGG: dth:DICTH_0074 hypothetical membrane protein YP_002352267.1 PFAM: OsmC family protein; KEGG: dth:DICTH_0075 hypothetical protein YP_002352268.1 KEGG: dth:DICTH_0076 prokaryotic N-terminal methylation motif domain protein YP_002352269.1 PFAM: putative RNA methylase; PUA domain containing protein; protein of unknown function Met10; Protein of unknown function methylase putative; KEGG: dth:DICTH_0078 methyltransferase YP_002352270.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: dth:DICTH_0077 fusion HD-GYP domain and HD-hydrolase domain YP_002352271.1 PFAM: nitroreductase; KEGG: dth:DICTH_0080 nitroreductase YP_002352272.1 PFAM: pseudouridine synthase; KEGG: dth:DICTH_0081 ribosomal large subunit pseudouridine synthase C YP_002352273.1 KEGG: dth:DICTH_0082 hypothetical protein YP_002352274.1 PFAM: glycosyl transferase group 1; KEGG: fjo:Fjoh_1035 glycosyl transferase, group 1 YP_002352275.1 PFAM: glycosyl transferase group 1; KEGG: afu:AF0607 LPS glycosyl transferase, putative YP_002352276.1 PFAM: glycosyl transferase group 1; KEGG: csc:Csac_2569 glycosyl transferase, group 1 YP_002352277.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: tle:Tlet_0255 NAD-dependent epimerase/dehydratase YP_002352278.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: tle:Tlet_0256 NAD-dependent epimerase/dehydratase YP_002352279.1 PFAM: glycosyl transferase family 2; KEGG: tle:Tlet_0254 glycosyl transferase family 2 YP_002352280.1 PFAM: regulatory protein TetR; KEGG: dth:DICTH_0090 TetR family transcriptional regulator YP_002352281.1 KEGG: dth:DICTH_0091 hypothetical protein YP_002352282.1 KEGG: dth:DICTH_0092 hypothetical protein YP_002352284.1 PFAM: putative small multi-drug export; KEGG: dth:DICTH_0093 small multidrug export protein YP_002352285.1 PFAM: Choloylglycine hydrolase; peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; KEGG: dth:DICTH_0094 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase subfamily, putative YP_002352286.1 KEGG: dth:DICTH_0095 hypothetical protein YP_002352287.1 PFAM: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; KEGG: dth:DICTH_0096 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase YP_002352288.1 PFAM: oxidoreductase domain protein; KEGG: dth:DICTH_0108 oxidoreductase, streptomycin biosynthesis protein YP_002352289.1 PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: dth:DICTH_0109 BadF/BadG/BcrA/BcrD ATPase family YP_002352290.1 PFAM: hypothetical protein; KEGG: gme:Gmet_1962 hypothetical protein YP_002352292.1 PFAM: Carbohydrate-binding family 9; KEGG: trq:TRQ2_0885 endo-1,4-beta-xylanase YP_002352293.1 PFAM: extracellular solute-binding protein family 1; KEGG: bcz:BCZK1634 sugar ABC transporter, sugar-binding protein YP_002352294.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tle:Tlet_1293 binding-protein-dependent transport systems inner membrane component YP_002352295.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: csc:Csac_1558 binding-protein-dependent transport systems inner membrane component YP_002352296.1 PFAM: extracellular solute-binding protein family 1; KEGG: bcz:BCZK1634 sugar ABC transporter, sugar-binding protein YP_002352297.1 PFAM: sugar isomerase (SIS); KEGG: dth:DICTH_0110 SIS domain protein YP_002352298.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: dth:DICTH_0111 transcription regulator, putative YP_002352299.1 PFAM: extracellular solute-binding protein family 1; KEGG: dth:DICTH_0113 sugar ABC transporter, sugar-binding protein, putative YP_002352300.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0114 sugar ABC transporter permease YP_002352301.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0116 sugar ABC transporter, permease YP_002352302.1 PFAM: glycoside hydrolase family 4; KEGG: dth:DICTH_0117 alpha-galactosidase YP_002352303.1 KEGG: dth:DICTH_0118 tagatose 6 phosphate kinase YP_002352304.1 KEGG: kcr:Kcr_0393 hypothetical protein YP_002352305.1 KEGG: sul:SYO3AOP1_0621 hypothetical protein YP_002352306.1 PFAM: PfkB domain protein; KEGG: dth:DICTH_0119 fructokinase YP_002352307.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: dth:DICTH_0120 dehydrogenase YP_002352308.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dth:DICTH_0121 ABC transporter, ATP-binding protein YP_002352309.1 PFAM: protein of unknown function DUF214; KEGG: dth:DICTH_0122 ABC transporter, permease protein YP_002352310.1 KEGG: dth:DICTH_0123 hypothetical protein YP_002352313.1 KEGG: pap:PSPA7_0027 phospholipase C, PlcB YP_002352315.1 KEGG: dth:DICTH_0124 hypothetical protein YP_002352316.1 SMART: ATPase AAA; KEGG: dth:DICTH_0125 hypothetical protein YP_002352317.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: dth:DICTH_0126 iojap domain protein YP_002352318.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: dth:DICTH_0127 transcriptional regulator YP_002352319.1 PFAM: RNP-1 like RNA-binding protein; KEGG: dth:DICTH_0128 RNA-binding protein YP_002352320.1 KEGG: dth:DICTH_0258 hypothetical protein YP_002352321.1 PFAM: radical SAM protein; KEGG: dth:DICTH_0263 pyruvate-formate lyase-activating enzyme YP_002352322.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: dth:DICTH_0277 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase YP_002352323.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: dth:DICTH_0276 bacterioferritin comigratory protein YP_002352324.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: dth:DICTH_0278 oxidoreductase, 2-nitropropane dioxygenase family YP_002352325.1 KEGG: dth:DICTH_0279 enoyl-[acyl-carrier-protein] reductase (NADH) YP_002352326.1 PFAM: regulatory protein DeoR; regulatory protein ArsR; Helix-turn-helix type 11 domain protein; KEGG: dth:DICTH_0280 DeoR-family transcriptional regulator YP_002352327.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: dth:DICTH_0291 transcriptional regulator YP_002352328.1 catalyzes the conversion of the aldose L-fucose into the corresponding ketose L-fuculose YP_002352329.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dth:DICTH_0293 ABC sugar transporter, ATPase subunit YP_002352330.1 PFAM: inner-membrane translocator; KEGG: dth:DICTH_0294 ribose transport system permease protein RbsC YP_002352331.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: dth:DICTH_0295 ABC sugar transporter, periplasmic ligand binding protein YP_002352332.1 TIGRFAM: rhamnose ABC transporter, periplasmic rhamnose-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: dth:DICTH_0296 rhamnose ABC transporter, rhamnose-binding protein YP_002352333.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dth:DICTH_0297 ribose transport ATP-binding protein RbsA YP_002352334.1 PFAM: inner-membrane translocator; KEGG: dth:DICTH_0298 ribose transport system permease protein RbsC YP_002352335.1 PFAM: inner-membrane translocator; KEGG: dth:DICTH_0299 ribose transport system permease protein RbsC YP_002352336.1 PFAM: protein of unknown function DUF1362; KEGG: dth:DICTH_0300 hypothetical protein YP_002352337.1 PFAM: dehydrogenase E1 component; transketolase; Transketolase domain protein; KEGG: dth:DICTH_0301 pyruvate dehydrogenase E1 component, beta subunit YP_002352338.1 PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: dth:DICTH_0304 L-sorbose 1-phosphate reductase YP_002352339.1 catalyzes the conversion of sorbitol 6-phosphate into fructose 6-phosphate YP_002352340.1 PFAM: xylose isomerase; KEGG: dth:DICTH_0306 AP endonuclease, family 2 YP_002352341.1 PFAM: class II aldolase/adducin family protein; KEGG: dth:DICTH_0307 fuculose-1-phosphate aldolase YP_002352342.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dth:DICTH_0308 3-oxoacyl-[acyl-carrier protein] reductase YP_002352343.1 TIGRFAM: L-rhamnose isomerase; PFAM: xylose isomerase; KEGG: dth:DICTH_0312 L-rhamnose isomerase YP_002352344.1 PFAM: carbohydrate kinase FGGY; KEGG: dth:DICTH_0313 L-fuculose kinase YP_002352345.1 PFAM: Desulfoferrodoxin ferrous iron-binding region; KEGG: dth:DICTH_0314 neelaredoxin YP_002352346.1 PFAM: Pectate lyase/Amb allergen; KEGG: dth:DICTH_0315 pectate lyase, polysaccharide lyase family 1 YP_002352347.1 PFAM: Pectate lyase/Amb allergen; fibronectin type III domain protein; KEGG: bld:BLi04129 hypothetical protein YP_002352348.1 PFAM: fibronectin type III domain protein; KEGG: gur:Gura_2036 fibronectin, type III domain-containing protein YP_002352349.1 PFAM: Pectinesterase; KEGG: trq:TRQ2_0501 pectinesterase YP_002352350.1 KEGG: dth:DICTH_1725 hypothetical protein YP_002352351.1 PFAM: Pectate lyase/Amb allergen; KEGG: dth:DICTH_0315 pectate lyase, polysaccharide lyase family 1 YP_002352352.1 KEGG: dth:DICTH_0238 lipoprotein, putative YP_002352353.1 PFAM: extracellular solute-binding protein family 1; KEGG: dth:DICTH_0316 YesO YP_002352354.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0317 lactose transport system YP_002352355.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0318 lactose ABC transporter permease YP_002352356.1 PFAM: glycoside hydrolase family 4; KEGG: dth:DICTH_0319 hidrolytic enzyme YP_002352357.1 KEGG: dth:DICTH_0320 hypothetical protein YP_002352358.1 PFAM: PfkB domain protein; KEGG: dth:DICTH_0321 2-keto-3-deoxygluconate kinase YP_002352359.1 PFAM: transcriptional regulator TrmB; regulatory protein IclR; Helix-turn-helix type 11 domain protein; Transcriptional regulator IclR; KEGG: dth:DICTH_0322 transcriptional regulator, IclR family YP_002352360.1 PFAM: dihydroorotate dehydrogenase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dth:DICTH_0323 dihydroorotate dehydrogenase superfamily YP_002352361.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dth:DICTH_0324 succinate dehydrogenase YP_002352362.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: dth:DICTH_0326 5-exo-alcohol dehydrogenase YP_002352363.1 KEGG: dth:DICTH_0343 hypothetical protein YP_002352364.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: dth:DICTH_0344 low-specificity L-threonine aldolase YP_002352365.1 PFAM: polysaccharide deacetylase; KEGG: dth:DICTH_0345 xylanase YP_002352366.1 PFAM: glycoside hydrolase family 16; Carbohydrate-binding CenC domain protein; KEGG: dth:DICTH_0346 laminarinase YP_002352367.1 PFAM: protein of unknown function DUF74; KEGG: dth:DICTH_0347 hypothetical protein YP_002352368.1 KEGG: dth:DICTH_0348 hypothetical protein YP_002352369.1 PFAM: hypothetical protein; KEGG: dth:DICTH_0350 malate transport protein YP_002352370.1 KEGG: dth:DICTH_0355 hypothetical protein YP_002352371.1 KEGG: dth:DICTH_0270 hypothetical protein YP_002352372.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dth:DICTH_0271 DNA-directed RNA polymerase subunit D YP_002352373.1 PFAM: DGC domain protein; KEGG: kcr:Kcr_0637 DGC domain-containing protein YP_002352374.1 PFAM: regulatory protein ArsR; KEGG: dth:DICTH_0273 ArsR family transcriptional regulator YP_002352375.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; KEGG: dth:DICTH_0356 phosphorylated carbohydrates phosphatase YP_002352376.1 PFAM: glycoside hydrolase family 1; KEGG: dth:DICTH_0359 beta-glucosidase A YP_002352377.1 KEGG: dth:DICTH_0358 DNA repair photolyase YP_002352378.1 KEGG: dth:DICTH_0360 hypothetical protein YP_002352379.1 PFAM: natural resistance-associated macrophage protein; KEGG: dth:DICTH_0361 mn2+ and fe2+ transporters of the nramp family YP_002352380.1 KEGG: dth:DICTH_0362 hypothetical protein YP_002352381.1 PFAM: peptidase M15A; KEGG: dth:DICTH_0363 GP46 YP_002352382.1 KEGG: dth:DICTH_0364 hypothetical protein YP_002352383.1 KEGG: dth:DICTH_0365 hypothetical protein YP_002352384.1 PFAM: protein of unknown function DUF1659; KEGG: dth:DICTH_0366 hypothetical protein YP_002352385.1 KEGG: dth:DICTH_0367 hypothetical protein YP_002352386.1 KEGG: dth:DICTH_0368 iron-sulfur cluster-binding protein YP_002352387.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: dth:DICTH_0369 cleavage and polyadenylation specificity factor YP_002352388.1 PFAM: peptidase M28; KEGG: dth:DICTH_0370 protein containing aminopeptidase domain, putative YP_002352389.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0371 phosphate ABC transporter, permease protein PstC YP_002352390.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0372 phosphate ABC transporter, permease protein PstA YP_002352391.1 KEGG: dth:DICTH_0373 phosphate ABC transporter, ATP-binding protein; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter; SMART: ATPase AAA YP_002352392.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: dth:DICTH_0374 phosphate transport system regulatory protein PhoU YP_002352393.1 PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; KEGG: sso:SSO1259 galactarate dehydratase, putative (GarD) YP_002352394.1 PFAM: SAF domain protein; KEGG: sso:SSO1260 hypothetical protein YP_002352395.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mta:Moth_0073 GntR family transcriptional regulator YP_002352396.1 PFAM: acyl-CoA reductase; Aldehyde Dehydrogenase; KEGG: aae:aq_186 aldehyde dehydrogenase YP_002352397.1 KEGG: tye:THEYE_A0167 transaldolase, putative; TIGRFAM: transaldolase; PFAM: Transaldolase YP_002352398.1 KEGG: mac:MA1313 hypothetical protein YP_002352399.1 PFAM: extracellular solute-binding protein family 1; KEGG: pmo:Pmob_0305 extracellular solute-binding protein family 1 YP_002352400.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pde:Pden_1048 binding-protein-dependent transport systems inner membrane component YP_002352401.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dge:Dgeo_2818 binding-protein-dependent transport systems inner membrane component YP_002352402.1 PFAM: glycoside hydrolase family 31; KEGG: tfu:Tfu_1613 putative alpha-glucosidase YP_002352403.1 PFAM: L-fucose isomerase-like-like; KEGG: dsy:DSY1496 hypothetical protein YP_002352404.1 KEGG: dth:DICTH_1975 sensory box protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region YP_002352405.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dth:DICTH_0376 3-oxoacyl-[acyl-carrier protein] reductase YP_002352406.1 KEGG: dth:DICTH_0377 hypothetical protein YP_002352407.1 KEGG: dth:DICTH_0378 hypothetical protein YP_002352408.1 KEGG: dth:DICTH_0379 hypothetical protein YP_002352409.1 PFAM: protein of unknown function DUF1680; KEGG: dth:DICTH_0380 hypothetical protein YP_002352410.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: mlo:mll0857 transcriptional regulator YP_002352412.1 PFAM: glycoside hydrolase family 42 domain protein; beta-galactosidase trimerisation domain protein; beta-galactosidase domain protein; KEGG: dth:DICTH_0381 beta-galactosidase I YP_002352413.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pmo:Pmob_0826 binding-protein-dependent transport systems inner membrane component YP_002352414.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pmo:Pmob_0827 binding-protein-dependent transport systems inner membrane component YP_002352415.1 PFAM: extracellular solute-binding protein family 1; KEGG: pmo:Pmob_0828 extracellular solute-binding protein family 1 YP_002352416.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: dth:DICTH_0016 transcriptional regulator YP_002352417.1 PFAM: SirA family protein; KEGG: dth:DICTH_0383 hypothetical protein YP_002352418.1 PFAM: protein of unknown function DUF395 YeeE/YedE; KEGG: dth:DICTH_0384 YeeE/YedE family protein YP_002352419.1 PFAM: DsrE family protein; KEGG: dth:DICTH_0385 hypothetical protein YP_002352420.1 KEGG: dth:DICTH_0386 hypothetical protein YP_002352421.1 TIGRFAM: sulfur relay protein TusB/DsrH; PFAM: DsrH family protein; KEGG: dth:DICTH_0387 DsrH like protein YP_002352422.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: dth:DICTH_0388 dihydrolipoamide dehydrogenase YP_002352423.1 KEGG: dth:DICTH_0390 hypothetical protein YP_002352424.1 KEGG: dth:DICTH_0391 hypothetical protein YP_002352425.1 KEGG: dth:DICTH_0392 ABC transporter, periplasmic ligand binding protein YP_002352426.1 PFAM: ABC transporter; Transport-associated OB domain protein; SMART: ATPase AAA; KEGG: dth:DICTH_0393 spermidine/putrescine import ATP-binding protein PotA YP_002352427.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0394 binding-protein-dependent transport systems inner membrane component:tumour necrosis factor c/lymphotoxin-beta YP_002352428.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0395 ABC transporter, inner membrane subunit YP_002352429.1 KEGG: dth:DICTH_0396 hypothetical protein YP_002352430.1 KEGG: dth:DICTH_0397 chitinase A1; PFAM: glycoside hydrolase family 18; SMART: chitinase II YP_002352431.1 PFAM: Alkaline phosphatase; KEGG: dth:DICTH_0398 alkaline phosphatase III YP_002352432.1 KEGG: dth:DICTH_0399 hypothetical protein YP_002352433.1 PFAM: Protein-tyrosine phosphatase, low molecular weight; KEGG: dth:DICTH_0400 arsenate reductase YP_002352434.1 PFAM: protein of unknown function DUF86; KEGG: dth:DICTH_0401 hypothetical protein YP_002352435.1 PFAM: transcriptional regulator PadR family protein; KEGG: dth:DICTH_0142 transcriptional regulator, PadR family, putative YP_002352436.1 KEGG: dth:DICTH_0143 hypothetical protein YP_002352437.1 PFAM: Mrp protein; KEGG: dth:DICTH_0145 MRP/NBP35 family ATP-binding protein YP_002352438.1 PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: dth:DICTH_0146 nitrogenase iron-molybdenum cofactor maturation domain protein YP_002352439.1 PFAM: beta-lactamase domain protein; KEGG: dth:DICTH_0147 metal-dependent hydrolases of the beta-lactamase superfamily II YP_002352440.1 KEGG: trq:TRQ2_1782 hypothetical protein YP_002352441.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pca:Pcar_3081 two component signal transduction response regulator YP_002352442.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: cyt:cce_3379 two-component sensor histidine kinase YP_002352445.1 PFAM: iron dependent repressor; FeoA family protein; KEGG: tle:Tlet_0887 FeoA family protein YP_002352446.1 PFAM: FeoA family protein; KEGG: mja:MJ0567 hypothetical protein YP_002352447.1 TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: tex:Teth514_1140 ferrous iron transport protein B YP_002352448.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: sul:SYO3AOP1_1193 methyltransferase type 11 YP_002352449.1 PFAM: DNA polymerase beta domain protein region; KEGG: tye:THEYE_A1085 nucleotidyltransferase YP_002352450.1 PFAM: protein of unknown function DUF86; KEGG: tye:THEYE_A1084 hypothetical protein YP_002352451.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: dth:DICTH_0059 transcriptional regulator YP_002352452.1 PFAM: extracellular solute-binding protein family 1; KEGG: dth:DICTH_0055 bacterial extracellular solute-binding protein, putative YP_002352453.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0056 multiple sugar-binding transport system permease YP_002352454.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0057 multiple sugar-binding transport system permease YP_002352455.1 PFAM: glycosyl hydrolase family 32 domain protein; SMART: glycoside hydrolase family 32; KEGG: dth:DICTH_0058 raffinose invertase YP_002352456.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: dth:DICTH_0404 TldD YP_002352457.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: dth:DICTH_0405 PmbA, putative YP_002352458.1 PFAM: aldo/keto reductase; KEGG: dth:DICTH_0406 oxidoreductase YP_002352459.1 KEGG: dth:DICTH_0407 laminarinase YP_002352460.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Fe-S cluster domain protein; KEGG: dth:DICTH_0408 ferredoxin 2 YP_002352461.1 PFAM: Stage II sporulation E family protein; KEGG: dth:DICTH_0409 serine phosphatase YP_002352462.1 PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: dth:DICTH_0410 NADH-ubiquinone oxidoreductase 24 kda subunit YP_002352463.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: dth:DICTH_0411 Fe-hydrogenase beta subunit YP_002352464.1 TIGRFAM: hydrogenase, Fe-only; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; iron hydrogenase small subunit; hydrogenase large subunit domain protein; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: dth:DICTH_0412 periplasmic [Fe] hydrogenase 1 YP_002352465.1 modulates transcription in response to the NADH/NAD(+) redox state YP_002352466.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dth:DICTH_0413 sulfate/thiosulfate import ATP-binding protein CysA YP_002352467.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0415 AbcB protein, putative YP_002352468.1 KEGG: dth:DICTH_0416 hypothetical protein YP_002352469.1 TIGRFAM: integral membrane protein MviN; PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; KEGG: dth:DICTH_0417 integral membrane protein MviN YP_002352470.1 KEGG: dth:DICTH_0418 hypothetical protein YP_002352471.1 KEGG: dth:DICTH_0419 hypothetical protein YP_002352472.1 PFAM: ABC transporter transmembrane region; ABC transporter; SMART: ATPase AAA; KEGG: dth:DICTH_0420 ABC transporter, ATP-binding/permease protein YP_002352473.1 PFAM: ABC transporter transmembrane region; ABC transporter; SMART: ATPase AAA; KEGG: dth:DICTH_0421 ABC transporter, ATP-binding/permease protein YP_002352474.1 PFAM: proton/sugar symporter LacY; nucleoside:H symporter; major facilitator superfamily MFS_1; KEGG: dth:DICTH_0424 transporter, major facilitator family YP_002352475.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: dth:DICTH_0425 antioxidant, AhpC/TSA family YP_002352476.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; CoA-binding domain protein; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: dth:DICTH_0426 CapD protein YP_002352477.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: dth:DICTH_0427 UDP-N-acetylglucosamine 2-epimerase YP_002352478.1 KEGG: csc:Csac_1803 UDP-glucose/GDP-mannose dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_002352479.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: dth:DICTH_0431 oxidoreductase, Gfo/Idh/MocA family/transferase hexapeptide repeat protein YP_002352480.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: dth:DICTH_0434 transferase hexapeptide repeat YP_002352481.1 KEGG: mem:Memar_1598 ATP-grasp enzyme-like protein YP_002352482.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: mhu:Mhun_0385 PHP-like YP_002352483.1 PFAM: polysaccharide deacetylase; KEGG: amr:AM1_3615 hypothetical protein YP_002352485.1 PFAM: O-antigen polymerase; KEGG: ssp:SSP0069 putative polysaccharide polymerase YP_002352486.1 PFAM: glycosyl transferase group 1; KEGG: dth:DICTH_0438 WbpH YP_002352487.1 PFAM: glycosyl transferase group 1; KEGG: tte:TTE0662 glycosyl transferase YP_002352488.1 PFAM: sugar transferase; KEGG: tte:TTE0665 sugar transferase involved in lipopolysaccharide synthesis YP_002352489.1 PFAM: glycosyl transferase group 1; KEGG: bja:blr2374 glycosyl transferase YP_002352490.1 undetermined role; similar to CarB protein but much smaller YP_002352491.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: haloacid dehalogenase; KEGG: mta:Moth_0754 haloacid dehalogenase-like hydrolase YP_002352494.1 KEGG: chy:CHY_2588 undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase YP_002352496.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: tte:TTE0667 cell wall biogenesis regulatory protein YP_002352497.1 KEGG: cts:Ctha_2296 hypothetical protein YP_002352499.1 KEGG: rrs:RoseRS_0185 PilT domain-containing protein YP_002352500.1 PFAM: polysaccharide export protein; KEGG: dth:DICTH_0450 polysaccharide biosynthesis protein YP_002352501.1 PFAM: polysaccharide export protein; KEGG: dth:DICTH_0451 polysaccharide biosynthesis/export protein, putative YP_002352502.1 PFAM: alpha/beta hydrolase fold; Thioesterase; KEGG: dth:DICTH_0453 lysophospholipase YP_002352503.1 PFAM: protein of unknown function DUF159; KEGG: dth:DICTH_0452 YoaM YP_002352504.1 KEGG: dth:DICTH_0454 hypothetical protein YP_002352505.1 TIGRFAM: M6 family metalloprotease domain protein; PFAM: peptidase M6 immune inhibitor A; KEGG: dth:DICTH_0455 putative protease YP_002352506.1 KEGG: dth:DICTH_0457 hypothetical protein YP_002352507.1 PFAM: protein of unknown function DUF89; KEGG: dth:DICTH_0456 hypothetical protein YP_002352508.1 TIGRFAM: CRISPR-associated protein, TM1812 family; CRISPR-associated protein DxTHG motif; PFAM: CRISPR-associated protein DxTHG; KEGG: dth:DICTH_0458 CRISPR-associated DxTHG motif protein YP_002352509.1 TIGRFAM: CRISPR-associated protein DxTHG motif; PFAM: CRISPR-associated protein DxTHG; KEGG: dth:DICTH_0187 CRISPR-associated DxTHG motif protein YP_002352510.1 TIGRFAM: CRISPR-associated RAMP protein, Csm5 family; PFAM: protein of unknown function DUF324; KEGG: dth:DICTH_0186 CRISPR-associated RAMP protein, Csm5 family YP_002352511.1 TIGRFAM: CRISPR-associated RAMP protein, Csm4 family; KEGG: dth:DICTH_0185 CRISPR-associated RAMP protein, Csm4 family YP_002352512.1 TIGRFAM: CRISPR-associated RAMP protein, Csm3 family; PFAM: protein of unknown function DUF324; KEGG: dth:DICTH_0184 CRISPR-associated RAMP protein, Csm3 family YP_002352513.1 TIGRFAM: CRISPR-associated protein, Csm2 family; PFAM: protein of unknown function DUF310; KEGG: dth:DICTH_0183 CRISPR-associated protein, Csm2 family YP_002352514.1 TIGRFAM: CRISPR-associated protein, Csm1 family; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: dth:DICTH_0182 CRISPR-associated protein, Csm1 family YP_002352515.1 TIGRFAM: CRISPR-associated protein, Csx3 family; PFAM: CRISPR-associated protein Csx3; KEGG: dth:DICTH_0181 CRISPR-associated protein, Csx3 family YP_002352516.1 TIGRFAM: queuosine biosynthesis protein QueD; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; KEGG: dth:DICTH_0459 6-pyruvoyl-tetrahydropterin synthase YP_002352517.1 similar protein in methanocaldococcus converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate as the first step in methanopterin biosynthesis YP_002352518.1 KEGG: dth:DICTH_0461 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_002352519.1 KEGG: dth:DICTH_0462 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK YP_002352520.1 TIGRFAM: CRISPR-associated protein Cas2; PFAM: protein of unknown function DUF196; KEGG: dth:DICTH_0165 CRISPR-associated protein Cas2 YP_002352521.1 TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48; KEGG: dth:DICTH_0164 CRISPR-associated protein Cas1, HMARI/TNEAP subtype YP_002352522.1 TIGRFAM: CRISPR-associated protein Cas4; PFAM: protein of unknown function DUF83; KEGG: tpd:Teth39_0133 CRISPR-associated Cas4 family protein YP_002352523.1 TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated HD domain protein; PFAM: helicase domain protein; KEGG: tpd:Teth39_0125 CRISPR-associated helicase Cas3 YP_002352524.1 TIGRFAM: CRISPR-associated protein Cas5, Hmari subtype; CRISPR-associated protein Cas5; PFAM: protein of unknown function DUF522; KEGG: tpd:Teth39_0124 CRISPR-associated Cas5 family Hmari subtype protein YP_002352525.1 TIGRFAM: CRISPR-associated protein, CT1132 family; CRISPR-associated protein, Csh2 family; PFAM: CRISPR-associated protein TM1801; KEGG: tpd:Teth39_0123 CRISPR-associated Csh2 family protein YP_002352526.1 TIGRFAM: CRISPR-associated protein, TM1802 family; CRISPR-associated protein, Csh1 family; PFAM: CRISPR-associated protein Csh1 domain protein; KEGG: tpd:Teth39_0122 CRISPR-associated Csh1 family protein YP_002352527.1 TIGRFAM: CRISPR-associated protein Cas6; PFAM: protein of unknown function DUF57; KEGG: dth:DICTH_0158 CRISPR-associated protein Cas6 YP_002352528.1 KEGG: dth:DICTH_0463 hypothetical protein YP_002352529.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dth:DICTH_0464 diguanylate cyclase (GGDEF) domain protein YP_002352530.1 PFAM: glycoside hydrolase family 12; KEGG: dth:DICTH_0465 endoglucanase YP_002352531.1 PFAM: glycoside hydrolase family 26; KEGG: dth:DICTH_0466 beta-mannanase YP_002352532.1 TIGRFAM: zinc-binding alcohol dehydrogenase family protein; PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: dth:DICTH_0188 alcohol dehydrogenase YP_002352533.1 PFAM: regulatory protein GntR HTH; KEGG: dth:DICTH_0467 GntR family transcriptional regulator YP_002352534.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dth:DICTH_0468 ABC transporter, ATP-binding protein YP_002352535.1 KEGG: dth:DICTH_0469 hypothetical protein YP_002352536.1 KEGG: dth:DICTH_0473 Cna protein B-type domain YP_002352537.1 TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; TGS domain protein; KEGG: dth:DICTH_0474 GTP-binding protein YP_002352538.1 PFAM: Semialdehyde dehydrogenase NAD - binding; oxidoreductase domain protein; Oxidoreductase domain; KEGG: dth:DICTH_0475 glucose--fructose oxidoreductase, putative YP_002352539.1 PFAM: regulatory protein MarR; KEGG: dth:DICTH_0476 transcriptional regulator YP_002352540.1 PFAM: ABC transporter transmembrane region; ABC transporter; SMART: ATPase AAA; KEGG: dth:DICTH_0477 ABC transporter, ATP-binding protein YP_002352541.1 PFAM: ABC transporter transmembrane region; ABC transporter; SMART: ATPase AAA; KEGG: dth:DICTH_0478 multidrug resistance ABC transporter YP_002352542.1 PFAM: Carbohydrate-binding family 9; KEGG: dth:DICTH_0479 endo-1,4-beta-xylanase A YP_002352543.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: dth:DICTH_0480 membrane spanning protein, putative YP_002352544.1 KEGG: dth:DICTH_0481 lipoprotein, putative YP_002352545.1 PFAM: Myo-inositol catabolism IolB domain protein; KEGG: dth:DICTH_0482 myo-inositol catabolism protein YP_002352546.1 TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: dth:DICTH_0483 2-keto-3-deoxygluconate-6-phosphate aldolase YP_002352547.1 PFAM: putative carbohydrate binding; glycosyl transferase 36; glycosyl transferase 36 associated; KEGG: dth:DICTH_0484 N,N'-diacetylchitobiose phosphorylase YP_002352548.1 PFAM: putative carbohydrate binding; glycosyl transferase 36; glycosyl transferase 36 associated; KEGG: dth:DICTH_0485 cellobiose phosphorylase YP_002352549.1 PFAM: glycoside hydrolase family 31; KEGG: dth:DICTH_0486 alpha-glucosidase 2 YP_002352550.1 PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: dth:DICTH_0487 permeases of the major facilitator superfamily YP_002352551.1 PFAM: N-acylglucosamine 2-epimerase; KEGG: dth:DICTH_0488 Unk2 YP_002352552.1 KEGG: dth:DICTH_0489 permease, putative YP_002352553.1 PFAM: protein of unknown function DUF123; SMART: Excinuclease ABC C subunit domain protein; KEGG: dth:DICTH_0490 hypothetical protein YP_002352554.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: dth:DICTH_0491 translocator protein, LysE family YP_002352555.1 KEGG: dth:DICTH_0492 hypothetical protein YP_002352556.1 KEGG: dth:DICTH_0493 poly-gamma-glutamic synthesis YP_002352557.1 PFAM: glycosidase PH1107-related; KEGG: dth:DICTH_0495 hypothetical protein YP_002352558.1 PFAM: BioY protein; KEGG: dth:DICTH_0494 BioY family protein YP_002352559.1 PFAM: PspC domain protein; KEGG: dth:DICTH_0496 transcription regulator, PspC family YP_002352560.1 PFAM: PspC domain protein; KEGG: dth:DICTH_0497 PspC domain family YP_002352561.1 KEGG: dth:DICTH_0498 hypothetical protein YP_002352562.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: dth:DICTH_0499 transcriptional regulator YP_002352563.1 PFAM: extracellular solute-binding protein family 5; KEGG: dth:DICTH_0500 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein YP_002352564.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0501 oligopeptide ABC transporter, permease protein YP_002352565.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0502 oligopeptide ABC transporter, permease protein YP_002352566.1 KEGG: dth:DICTH_0503 oligopeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_002352567.1 KEGG: dth:DICTH_0504 oligopeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_002352568.1 PFAM: glycoside hydrolase family 5; KEGG: dth:DICTH_0505 endoglucanase H YP_002352569.1 PFAM: glycoside hydrolase family 5; KEGG: dth:DICTH_0506 endoglucanase H YP_002352570.1 PFAM: glycoside hydrolase family 5; KEGG: dth:DICTH_0508 endoglucanase YP_002352571.1 KEGG: dth:DICTH_0507 hypothetical protein YP_002352572.1 PFAM: ABC transporter transmembrane region; ABC transporter; SMART: ATPase AAA; KEGG: dth:DICTH_0509 ABC-type multidrug/protein/lipid transport system, ATPase component YP_002352573.1 PFAM: ABC transporter transmembrane region; ABC transporter; SMART: ATPase AAA; KEGG: dth:DICTH_0510 ABC-type multidrug/protein/lipid transport system, ATPase component YP_002352574.1 PFAM: glycoside hydrolase family 57; KEGG: dth:DICTH_0511 glycoside hydrolase, family 57 YP_002352575.1 KEGG: dth:DICTH_0512 pullulanase YP_002352576.1 KEGG: dth:DICTH_0513 hypothetical protein YP_002352577.1 PFAM: protein of unknown function DUF955; KEGG: dth:DICTH_0514 beta and gamma crystallin YP_002352578.1 PFAM: helix-turn-helix domain protein; KEGG: dth:DICTH_0515 AraC family transcriptional regulator YP_002352579.1 PFAM: peptidase M18 aminopeptidase I; peptidase M20; peptidase M42 family protein; KEGG: dth:DICTH_0516 endoglucanase M YP_002352580.1 PFAM: peptidase M18 aminopeptidase I; peptidase M42 family protein; KEGG: dth:DICTH_0517 endoglucanase M YP_002352581.1 PFAM: peptidase M18 aminopeptidase I; peptidase M20; peptidase M42 family protein; KEGG: dth:DICTH_0518 endoglucanase YP_002352582.1 KEGG: dth:DICTH_0519 endonuclease III; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; Endonuclease III/Nth; SMART: iron-sulfur cluster loop YP_002352583.1 PFAM: aldo/keto reductase; KEGG: dth:DICTH_0520 oxidoreductase, aldo/keto reductase family YP_002352584.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: dth:DICTH_0521 zinc-containing alcohol dehydrogenase superfamily YP_002352585.1 KEGG: dth:DICTH_0522 hypothetical protein YP_002352586.1 PFAM: metallophosphoesterase; KEGG: dth:DICTH_0524 Ser/Thr protein phosphatase family protein YP_002352587.1 PFAM: ROK family protein; iron dependent repressor; regulatory protein Crp; regulatory protein ArsR; Helix-turn-helix type 11 domain protein; KEGG: dth:DICTH_0523 transcriptional repressor of the xylose operon, putative YP_002352588.1 PFAM: ExsB family protein; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; KEGG: dth:DICTH_0525 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase YP_002352589.1 PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like; KEGG: dth:DICTH_0529 anthranilate synthase component I YP_002352590.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: dth:DICTH_0530 anthranilate synthase component II YP_002352591.1 KEGG: dth:DICTH_0531 anthranilate phosphoribosyltransferase; TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; glycosyl transferase, family 3-like YP_002352592.1 PFAM: Indole-3-glycerol phosphate synthase; KEGG: dth:DICTH_0532 indole-3-glycerol phosphate synthase YP_002352593.1 PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: dth:DICTH_0533 N-(5'phosphoribosyl)anthranilate isomerase YP_002352594.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate YP_002352595.1 KEGG: dth:DICTH_0535 tryptophan synthase, alpha subunit; TIGRFAM: tryptophan synthase, alpha subunit; PFAM: tryptophan synthase alpha chain YP_002352596.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: dth:DICTH_0537 alcohol dehydrogenase, zinc-dependent YP_002352597.1 PFAM: Formiminotransferase-cyclodeaminase; KEGG: dth:DICTH_0536 methenyltetrahydrofolate cyclohydrolase YP_002352598.1 PFAM: aminotransferase class I and II; aminotransferase class-III; KEGG: dth:DICTH_0538 2-amino-3-ketobutyrate coenzyme A ligase YP_002352599.1 TIGRFAM: L-lactate dehydrogenase; PFAM: Lactate/malate dehydrogenase; KEGG: dth:DICTH_0539 L-lactate dehydrogenase YP_002352600.1 PFAM: Circadian clock protein KaiC central region; KEGG: dth:DICTH_0540 RecA-superfamily ATPases implicated in signal transduction YP_002352601.1 KEGG: dth:DICTH_0541 hypothetical protein YP_002352602.1 TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; protein of unknown function Met10; (Uracil-5)-methyltransferase; KEGG: dth:DICTH_0542 23S rRNA (uracil-5-)-methyltransferase RumA YP_002352603.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: dth:DICTH_0543 methanol dehydrogenase regulatory protein YP_002352604.1 PFAM: protein of unknown function DUF58; KEGG: dth:DICTH_0544 hypothetical protein YP_002352605.1 KEGG: dth:DICTH_0545 hypothetical protein YP_002352606.1 KEGG: dth:DICTH_0546 YdaE YP_002352607.1 PFAM: ribonuclease HII/HIII; KEGG: dth:DICTH_0547 ribonuclease HII, putative YP_002352608.1 KEGG: bcy:Bcer98_2929 hypothetical protein YP_002352609.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0548 maltose ABC transporter, permease protein YP_002352610.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0549 MalF protein YP_002352611.1 PFAM: extracellular solute-binding protein family 1; KEGG: dth:DICTH_0550 maltose ABC transporter, periplasmic maltose-binding protein YP_002352612.1 KEGG: dth:DICTH_0551 hypothetical protein YP_002352613.1 PFAM: glycosyl transferase family 9; O-antigen polymerase; KEGG: dth:DICTH_0553 heptosyltransferase family YP_002352614.1 TIGRFAM: cytidyltransferase-related domain protein; rfaE bifunctional protein; PFAM: cytidylyltransferase; KEGG: dth:DICTH_0552 RfaE bifunctional protein, domain II YP_002352615.1 TIGRFAM: rfaE bifunctional protein; PFAM: PfkB domain protein; KEGG: dth:DICTH_0554 RfaE bifunctional protein, domain I YP_002352616.1 TIGRFAM: phosphoheptose isomerase; HAD-superfamily hydrolase, subfamily IA, variant 1; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: sugar isomerase (SIS); haloacid dehalogenase; KEGG: dth:DICTH_0555 phosphoheptose isomerase YP_002352617.1 KEGG: dth:DICTH_0556 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_002352618.1 TIGRFAM: cysteine desulfurase NifS; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: dth:DICTH_0557 aminotransferase, class V superfamily YP_002352619.1 PFAM: protein of unknown function DUF59; nitrogen-fixing NifU domain protein; KEGG: cpo:COPRO5265_1169 NifU protein YP_002352620.1 KEGG: dth:DICTH_0561 hypothetical protein YP_002352621.1 KEGG: dth:DICTH_0561 hypothetical protein YP_002352622.1 KEGG: dth:DICTH_0563 hypothetical protein YP_002352623.1 KEGG: dth:DICTH_0563 hypothetical protein YP_002352624.1 PFAM: TPR repeat-containing protein; transglutaminase domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: dth:DICTH_0562 tetratricopeptide repeat domain protein YP_002352625.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: dth:DICTH_0564 transcriptional regulator YP_002352626.1 PFAM: methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; KEGG: dth:DICTH_0565 trimethylamine corrinoid protein 2 YP_002352627.1 PFAM: ferredoxin; KEGG: dth:DICTH_0566 2Fe-2S iron-sulfur cluster binding domain protein YP_002352628.1 PFAM: uroporphyrinogen decarboxylase (URO-D); KEGG: dth:DICTH_0567 methylcobamide:CoM methyltransferase MtbA, putative YP_002352629.1 PFAM: protein of unknown function DUF39; KEGG: dth:DICTH_0569 domain of unknown function, putative YP_002352630.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: dth:DICTH_0570 iron-sulfur cluster-binding protein YP_002352631.1 PFAM: ApbE family lipoprotein; KEGG: dth:DICTH_0571 hypothetical protein YP_002352632.1 KEGG: dth:DICTH_0572 hypothetical protein YP_002352633.1 KEGG: dth:DICTH_0573 hypothetical protein YP_002352634.1 PFAM: protein of unknown function DUF214; KEGG: dth:DICTH_0574 ABC-type transport system, involved in lipoprotein release, permease component YP_002352635.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: dth:DICTH_0575 efflux transporter, RND family, MFP subunit YP_002352636.1 KEGG: dth:DICTH_0576 hypothetical protein YP_002352637.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dth:DICTH_0577 sugar ABC transporter, ATP-binding protein YP_002352638.1 KEGG: dth:DICTH_0578 hypothetical protein YP_002352639.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: dth:DICTH_0579 hypothetical protein YP_002352640.1 KEGG: dth:DICTH_0580 hypothetical protein YP_002352641.1 PFAM: UvrD/REP helicase; KEGG: dth:DICTH_0581 ATP-dependent DNA helicase YP_002352642.1 PFAM: protein of unknown function DUF59; KEGG: dth:DICTH_0582 YitW YP_002352643.1 PFAM: response regulator receiver; KEGG: dth:DICTH_0583 transcriptional regulatory protein YP_002352644.1 PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: dth:DICTH_0585 alkaline phosphatase synthesis sensor protein PhoR YP_002352645.1 KEGG: dth:DICTH_0584 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: hypothetical protein; IMP dehydrogenase/GMP reductase YP_002352646.1 PFAM: cobalamin B12-binding domain protein; radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dth:DICTH_0587 Fe-S oxidoreductase family protein YP_002352647.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: dth:DICTH_0586 hypothetical protein YP_002352648.1 KEGG: dth:DICTH_0588 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase YP_002352649.1 KEGG: dth:DICTH_0589 L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_002352650.1 KEGG: dth:DICTH_0590 quinolinate synthetase complex, A subunit; TIGRFAM: quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A YP_002352651.1 PFAM: protein of unknown function DUF1049; KEGG: dth:DICTH_0591 PglF YP_002352652.1 PFAM: Propanediol utilization protein; KEGG: dth:DICTH_0593 acetate kinase YP_002352653.1 KEGG: dth:DICTH_0594 hypothetical protein YP_002352654.1 TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: dth:DICTH_0596 folylpolyglutamate synthase YP_002352655.1 TIGRFAM: glutaredoxin-like domain protein; PFAM: glutaredoxin; glutaredoxin 2; KEGG: dth:DICTH_0595 hypothetical protein YP_002352656.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; HI0933 family protein; KEGG: dth:DICTH_0597 thioredoxin-disulfide reductase YP_002352657.1 PFAM: aldo/keto reductase; KEGG: dth:DICTH_0598 oxidoreductase, putative YP_002352658.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: trq:TRQ2_0111 MATE efflux family protein YP_002352659.1 TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase; KEGG: dth:DICTH_0601 lipoyltransferase YP_002352660.1 KEGG: hypothetical protein YP_002352661.1 KEGG: dth:DICTH_0602 hypothetical protein YP_002352662.1 PFAM: protein of unknown function DUF107; KEGG: dth:DICTH_0603 YqeZ YP_002352663.1 KEGG: dth:DICTH_0604 hypothetical protein YP_002352664.1 PFAM: ABC transporter; ABC transporter; SMART: ATPase AAA; KEGG: dth:DICTH_0605 ABC transporter ATP-binding protein YP_002352665.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0606 ABC transporter permease protein YP_002352666.1 PFAM: glycoside hydrolase family 57; KEGG: dth:DICTH_0607 glycoside hydrolase, family 57 YP_002352667.1 Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA; cleaves DNA containing urea residues, AP sites, base mismatches, insertion/deletion mismatches, flaps, and pseudo-Y structures YP_002352668.1 PFAM: protein of unknown function DUF763; KEGG: dth:DICTH_0608 hypothetical protein YP_002352669.1 PFAM: protein of unknown function DUF192; KEGG: dth:DICTH_0610 hypothetical protein YP_002352670.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dth:DICTH_0611 hypothetical protein YP_002352671.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: dth:DICTH_0612 TldD protein YP_002352672.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: dth:DICTH_0613 putative PmbA protein YP_002352673.1 PFAM: Rubrerythrin; KEGG: dth:DICTH_0615 rubrerythrin subfamily YP_002352674.1 PFAM: diaminopimelate epimerase; KEGG: dth:DICTH_0614 diaminopimelate epimerase YP_002352675.1 KEGG: dth:DICTH_0616 thermostable DNA ligase; TIGRFAM: DNA ligase I, ATP-dependent Dnl1; PFAM: DNA ligase domain protein; ATP dependent DNA ligase domain protein; ATP dependent DNA ligase YP_002352676.1 KEGG: dth:DICTH_0623 hdig domain protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_002352677.1 PFAM: nucleotidyl transferase; KEGG: dth:DICTH_0625 bifunctional GcaD protein (TMS protein) YP_002352678.1 KEGG: dth:DICTH_0626 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_002352679.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response YP_002352680.1 TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: dth:DICTH_0628 DegV family protein YP_002352681.1 PFAM: single-stranded nucleic acid binding R3H domain protein; SMART: ATPase AAA; KEGG: dth:DICTH_0629 single-stranded nucleic acid binding R3H YP_002352682.1 PFAM: thymidylate kinase; KEGG: dth:DICTH_0630 thymidylate kinase YP_002352683.1 PFAM: protein of unknown function DUF970; KEGG: dth:DICTH_0631 hypothetical protein YP_002352684.1 SMART: ATPase AAA; KEGG: dth:DICTH_0632 DNA polymerase III subunit gamma/tau YP_002352685.1 PFAM: PSP1 domain protein; KEGG: dth:DICTH_0633 tpl protein YP_002352686.1 KEGG: dth:DICTH_0634 hypothetical protein YP_002352687.1 PFAM: ATPase AAA; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA; KEGG: dth:DICTH_0635 ATPase, AAA family YP_002352688.1 PFAM: protein of unknown function DUF610 YibQ; KEGG: dth:DICTH_0636 divergent polysaccharide deacetylase family YP_002352689.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: cau:Caur_0493 alpha amylase catalytic region YP_002352690.1 PFAM: PfkB domain protein; KEGG: dth:DICTH_0637 ribokinase:carbohydrate kinase, PfkB YP_002352691.1 KEGG: dth:DICTH_0638 membrane-associated zinc metalloprotease, putative; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50; SMART: PDZ/DHR/GLGF domain protein YP_002352692.1 KEGG: dth:DICTH_0639 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: IspG family protein YP_002352693.1 KEGG: dth:DICTH_0640 hdig/kh domain protein; TIGRFAM: metal dependent phophohydrolase; YmdA/YtgF protein; PFAM: KH type 1 domain protein; metal-dependent phosphohydrolase HD sub domain; Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region; KH domain protein YP_002352694.1 PFAM: metallophosphoesterase; KEGG: dth:DICTH_0641 hypothetical protein YP_002352695.1 PFAM: Stage V sporulation protein S; KEGG: dth:DICTH_0642 SpoVS YP_002352696.1 PFAM: ribosomal protein L31; KEGG: dth:DICTH_0643 ribosomal protein L31 YP_002352697.1 KEGG: dth:DICTH_0644 thymidylate synthase, flavin-dependent; TIGRFAM: thymidylate synthase, flavin-dependent; PFAM: thymidylate synthase complementing protein ThyX YP_002352698.1 PFAM: thymidine kinase; KEGG: dth:DICTH_0645 thymidine kinase YP_002352699.1 PFAM: protein of unknown function DUF1385; KEGG: dth:DICTH_0646 conserved membrane protein YqhQ YP_002352700.1 TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: dth:DICTH_0647 peptide chain release factor 1 YP_002352701.1 TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: dth:DICTH_0648 bifunctional methyltransferase YP_002352702.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC domain; KEGG: dth:DICTH_0649 SUA5/YciO/YrdC/YwlC family protein YP_002352703.1 PFAM: Protein-tyrosine phosphatase, low molecular weight; KEGG: dth:DICTH_0650 protein tyrosine phosphatase YP_002352704.1 KEGG: dth:DICTH_0651 ribose 5-phosphate isomerase B; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase YP_002352705.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate YP_002352706.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate YP_002352707.1 TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: dth:DICTH_0654 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_002352708.1 KEGG: dth:DICTH_0655 hypothetical protein YP_002352709.1 PFAM: protein of unknown function DUF490; KEGG: dth:DICTH_0656 hypothetical protein YP_002352710.1 PFAM: surface antigen (D15); surface antigen variable number repeat protein; KEGG: dth:DICTH_0657 surface antigen, putative YP_002352711.1 PFAM: surface antigen variable number repeat protein; KEGG: dth:DICTH_0658 outer membrane protein, putative YP_002352712.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: dth:DICTH_0659 cationic outer membrane protein, putative YP_002352713.1 PFAM: outer membrane chaperone Skp (OmpH); KEGG: dth:DICTH_0660 outer membrane protein OmpH YP_002352714.1 TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: transferase hexapeptide repeat containing protein; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD; KEGG: dth:DICTH_0661 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_002352715.1 PFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; KEGG: dth:DICTH_0662 UDP-3-0-acyl N-acetylglucosamine deacetylase YP_002352716.1 TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: dth:DICTH_0663 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ YP_002352717.1 TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: dth:DICTH_0664 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase YP_002352718.1 KEGG: dth:DICTH_0665 lipid-A-disaccharide synthase; TIGRFAM: lipid-A-disaccharide synthase; PFAM: glycosyl transferase family 19 YP_002352719.1 KEGG: dth:DICTH_0666 hypothetical protein YP_002352720.1 PFAM: ABC transporter transmembrane region; ABC transporter; SMART: ATPase AAA; KEGG: dth:DICTH_0667 ATP-binding protein of ABC transporter YP_002352721.1 PFAM: oxidoreductase domain protein; KEGG: dth:DICTH_0668 oxidoreductase, Gfo/Idh/MocA family YP_002352722.1 KEGG: dth:DICTH_0669 tetratricopeptide repeat domain protein YP_002352723.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dth:DICTH_0670 ABC transporter ATP-binding protein YP_002352724.1 KEGG: dth:DICTH_0671 hypothetical protein YP_002352725.1 TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; Prolyl-tRNA synthetase, class II-like; KEGG: dth:DICTH_0672 prolyl-tRNA synthetase YP_002352726.1 KEGG: dth:DICTH_0673 deoxyuridine 5'-triphosphate nucleotidohydrolase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase YP_002352727.1 TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; Miro domain protein; KEGG: dth:DICTH_0674 translation elongation factor G YP_002352728.1 PFAM: protein of unknown function DUF951; KEGG: dth:DICTH_0675 hypothetical protein YP_002352729.1 KEGG: dth:DICTH_0676 glutamate 5-kinase; TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein YP_002352730.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dth:DICTH_0678 ABC transporter, ATP-binding protein YP_002352731.1 PFAM: outer membrane efflux protein; KEGG: dth:DICTH_0679 outer membrane efflux protein YP_002352732.1 PFAM: outer membrane efflux protein; KEGG: dth:DICTH_0680 hypothetical protein YP_002352733.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dth:DICTH_0681 secretion protein HlyD YP_002352734.1 PFAM: protein of unknown function DUF214; KEGG: dth:DICTH_0682 ABC transporter, permease protein YP_002352735.1 KEGG: dth:DICTH_0683 hypothetical protein YP_002352736.1 TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: dth:DICTH_0684 glycerol kinase YP_002352737.1 KEGG: dth:DICTH_0685 MlpD YP_002352738.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: dth:DICTH_0686 RNA polymerase sigma-E factor YP_002352739.1 KEGG: dth:DICTH_0687 hypothetical protein YP_002352740.1 KEGG: dth:DICTH_0689 hypothetical protein YP_002352741.1 PFAM: HhH-GPD family protein; KEGG: dth:DICTH_0688 HhH-GPD YP_002352742.1 KEGG: dth:DICTH_0690 bifunctional purine biosynthesis protein PurH; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: MGS domain protein; AICARFT/IMPCHase bienzyme formylation region YP_002352743.1 PFAM: protein of unknown function DUF151; KEGG: dth:DICTH_0691 hypothetical protein YP_002352744.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: dth:DICTH_0693 permeases of the drug/metabolite transporter (DMT) superfamily YP_002352745.1 KEGG: dth:DICTH_0692 riboflavin transporter YP_002352746.1 TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: dth:DICTH_0695 DegV family protein YP_002352747.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: dth:DICTH_0696 xylosidase/arabinosidase YP_002352748.1 PFAM: regulatory protein GntR HTH; KEGG: dth:DICTH_0699 GntR family transcriptional regulator protein YP_002352749.1 PFAM: extracellular solute-binding protein family 1; KEGG: dth:DICTH_0700 maltose ABC transporter, periplasmic maltose-binding protein YP_002352750.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0701 maltose ABC transporter, permease protein YP_002352751.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0702 maltose ABC transporter, permease protein YP_002352752.1 PFAM: Ig domain protein; glycosyl hydrolase 53 domain protein; KEGG: dth:DICTH_0703 arabinogalactan endo-1,4-beta-galactosidase, putative YP_002352753.1 PFAM: extracellular solute-binding protein family 5; KEGG: dth:DICTH_0704 bacterial extracellular solute-binding protein, family 5 YP_002352754.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0706 oligopeptide/dipeptide ABC transporter, permease protein YP_002352755.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0707 oligopeptide ABC transporter permease protein YP_002352756.1 catalyzes the formation of methylglyoxal from glycerone phosphate YP_002352758.1 PFAM: S-layer domain protein; KEGG: dth:DICTH_0709 outer membrane protein, putative YP_002352759.1 TIGRFAM: geranylgeranyl reductase; PFAM: HI0933 family protein; FAD dependent oxidoreductase; KEGG: dth:DICTH_0710 FAD dependent oxidoreductase, putative YP_002352760.1 PFAM: aminotransferase class I and II; KEGG: dth:DICTH_0711 valine-pyruvate aminotransferase YP_002352761.1 TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; KEGG: dth:DICTH_0712 1-phosphofructokinase, putative YP_002352762.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: dth:DICTH_0714 tetratricopeptide repeat domain protein YP_002352763.1 KEGG: dth:DICTH_0713 cell division protein FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; ATPase AAA; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA YP_002352764.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: dth:DICTH_0715 tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidinesynthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) YP_002352765.1 PFAM: protein of unknown function DUF1292; KEGG: dth:DICTH_0718 hypothetical protein YP_002352766.1 PFAM: aminodeoxychorismate lyase; KEGG: dth:DICTH_0719 hypothetical protein YP_002352767.1 TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; PFAM: HAD-superfamily phosphatase subfamily IIIA; KEGG: dth:DICTH_0720 had superfamily (subfamily iiia) phosphatase YP_002352768.1 TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: dth:DICTH_0721 type IV pilus assembly protein PilB YP_002352769.1 KEGG: dth:DICTH_0722 type IV pilus retraction protein PilT; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: ATPase AAA YP_002352770.1 PFAM: type II secretion system protein; KEGG: dth:DICTH_0723 FimO YP_002352771.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: dth:DICTH_0724 SigF YP_002352772.1 KEGG: dth:DICTH_0725 prokaryotic N-terminal methylation motif domain protein YP_002352773.1 KEGG: dth:DICTH_0725 prokaryotic N-terminal methylation motif domain protein YP_002352774.1 KEGG: dth:DICTH_0726 prepilin-type N-terminal cleavage/methylation domain protein YP_002352775.1 KEGG: dth:DICTH_0727 Smc1 chromosome segregation protein, putative YP_002352776.1 PFAM: DNA repair protein RadC; KEGG: dth:DICTH_0728 DNA repair protein YP_002352777.1 KEGG: dth:DICTH_0729 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; 3'-5' exonuclease; SMART: Helix-hairpin-helix domain protein class 2 YP_002352778.1 KEGG: dth:DICTH_0730 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase YP_002352779.1 KEGG: dth:DICTH_0731 excinuclease ABC, B subunit; TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; UvrB/UvrC protein; type III restriction protein res subunit; SMART: DEAD-like helicases YP_002352780.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter; KEGG: dth:DICTH_0732 excinuclease ABC, A subunit YP_002352781.1 TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: dth:DICTH_0733 methylated-DNA--protein-cysteine methyltransferase YP_002352782.1 PFAM: ROK family protein; KEGG: dth:DICTH_0734 glucokinase YP_002352783.1 KEGG: dth:DICTH_0735 hypothetical protein YP_002352784.1 KEGG: dth:DICTH_0736 hypothetical protein YP_002352785.1 KEGG: dth:DICTH_0737 undecaprenyl-phosphate galactose phosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase YP_002352786.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: dth:DICTH_0738 HNH endonuclease domain protein YP_002352787.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; calcium-translocating P-type ATPase, PMCA-type; PFAM: cation transporting ATPase domain protein; haloacid dehalogenase; E1-E2 ATPase-associated domain protein; KEGG: dth:DICTH_0739 cation transport ATPase YP_002352788.1 PFAM: peptidoglycan-binding LysM; KEGG: dth:DICTH_0740 LysM domain protein YP_002352789.1 PFAM: ABC transporter; Transport-associated OB domain protein; SMART: ATPase AAA; KEGG: dth:DICTH_0743 ABC-type sugar/spermidine/putrescine/iron/thiamine transport system, ATPase component YP_002352790.1 PFAM: glycoside hydrolase family 57; Domain of unknown function DUF1957; KEGG: dth:DICTH_0744 glycoside hydrolase, family 57 YP_002352791.1 PFAM: glycoside hydrolase family 57; Domain of unknown function DUF1925; Domain of unknown function DUF1926; KEGG: dth:DICTH_0745 alpha-amylase 1 YP_002352792.1 KEGG: dth:DICTH_0747 hypothetical protein YP_002352793.1 PFAM: inositol monophosphatase; KEGG: dth:DICTH_0748 inositol-1-monophosphatase YP_002352794.1 PFAM: ATPase AAA; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA; SMART: ATPase AAA; KEGG: dth:DICTH_0749 ATPase, AAA family YP_002352795.1 PFAM: protein of unknown function DUF355; KEGG: dth:DICTH_0750 hypothetical protein YP_002352796.1 KEGG: dth:DICTH_0752 probable cytidylate kinase, putative YP_002352797.1 KEGG: dth:DICTH_0751 hypothetical protein YP_002352798.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: dth:DICTH_0753 phosphate transport system regulatory protein PhoU YP_002352799.1 KEGG: dth:DICTH_0754 hypothetical protein YP_002352800.1 KEGG: dth:DICTH_0755 adenosylhomocysteinase; TIGRFAM: adenosylhomocysteinase; PFAM: S-adenosyl-L-homocysteine hydrolase; Acetohydroxy acid isomeroreductase catalytic domain protein; S-adenosyl-L-homocysteine hydrolase, NAD binding YP_002352801.1 PFAM: LemA family protein; KEGG: dth:DICTH_0756 LemA protein YP_002352802.1 putative metalloprotease YP_002352803.1 PFAM: nitroreductase; KEGG: dth:DICTH_0759 NADH dehydrogenase (h(2)o(2) forming nadh oxidase) YP_002352804.1 PFAM: patatin; KEGG: dth:DICTH_0758 esterase YP_002352805.1 PFAM: DRTGG domain protein; KEGG: dth:DICTH_0760 DRTGG domain, putative YP_002352806.1 PFAM: hypothetical protein; ATP-binding region ATPase domain protein; KEGG: dth:DICTH_0761 anti-sigma regulatory factor YP_002352807.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Fe-S cluster domain protein; KEGG: dth:DICTH_0762 ferredoxin 2 YP_002352808.1 KEGG: dth:DICTH_0763 hypothetical protein YP_002352809.1 KEGG: dth:DICTH_0764 DRTGG domain, putative YP_002352810.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: dth:DICTH_0765 PHP domain, putative YP_002352811.1 PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: dth:DICTH_0766 NADP-reducing hydrogenase, subunit A YP_002352812.1 PFAM: ATP-binding region ATPase domain protein; KEGG: dth:DICTH_0767 sensory transduction histidine kinase YP_002352813.1 KEGG: dth:DICTH_0768 NADP-reducing hydrogenase, subunit B YP_002352814.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: dth:DICTH_0769 NADH:ubiquinone oxidoreductase, nadh-binding (51 kd) subunit YP_002352815.1 TIGRFAM: xylulokinase; PFAM: carbohydrate kinase FGGY; KEGG: dth:DICTH_0771 xylulokinase YP_002352816.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP YP_002352817.1 KEGG: dth:DICTH_0773 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: Lysyl-tRNA synthetase class 1c YP_002352818.1 TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: dth:DICTH_0774 orotate phosphoribosyltransferase YP_002352819.1 PFAM: radical SAM protein; KEGG: dth:DICTH_0775 hypothetical protein YP_002352820.1 PFAM: cyclase family protein; KEGG: dth:DICTH_0776 polyketide cyclase YP_002352821.1 PFAM: glycosyl transferase group 1; KEGG: dth:DICTH_0777 mannosyl transferase YP_002352822.1 KEGG: dth:DICTH_0778 hypothetical protein YP_002352823.1 TIGRFAM: methylthioadenosine phosphorylase; PFAM: purine or other phosphorylase family 1; KEGG: dth:DICTH_0779 methylthioadenosine phosphorylase YP_002352824.1 KEGG: dth:DICTH_0780 initiation factor 2B alpha/beta/delta; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related YP_002352825.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: dth:DICTH_0781 amidohydrolase family, putative YP_002352826.1 TIGRFAM: asparaginyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: dth:DICTH_0782 asparaginyl-tRNA synthetase YP_002352827.1 PFAM: Extracellular ligand-binding receptor; KEGG: dth:DICTH_0783 branched chain amino acid ABC transporter YP_002352828.1 PFAM: inner-membrane translocator; KEGG: dth:DICTH_0784 branched-chain amino acid ABC transporter, permease protein YP_002352829.1 PFAM: inner-membrane translocator; KEGG: dth:DICTH_0785 branched-chain amino acid ABC transporter, permease protein YP_002352830.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dth:DICTH_0786 high affinity branched-chain amino acid ABC transporter, ATP-binding protein YP_002352831.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dth:DICTH_0787 high affinity branched-chain amino acid ABC transporter, ATP-binding protein YP_002352832.1 PFAM: hypothetical protein; KEGG: dth:DICTH_0788 acetoin utilization AcuB protein YP_002352833.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: dth:DICTH_0789 acetate kinase YP_002352834.1 PFAM: protein of unknown function DUF177; KEGG: dth:DICTH_0790 hypothetical protein YP_002352835.1 TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: dth:DICTH_0791 ribosomal protein L32 YP_002352836.1 KEGG: dth:DICTH_0792 3-oxoacyl-[acyl-carrier-protein] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YP_002352837.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: dth:DICTH_0793 malonyl CoA-acyl carrier protein transacylase YP_002352838.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: dth:DICTH_0794 3-oxoacyl-(acyl-carrier-protein) reductase YP_002352839.1 TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding; KEGG: dth:DICTH_0795 acyl carrier protein YP_002352840.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: beta-ketoacyl synthase; KEGG: dth:DICTH_0796 3-oxoacyl-[acyl-carrier-protein] synthase II YP_002352841.1 PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: dth:DICTH_0797 ribonuclease III YP_002352842.1 PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: dth:DICTH_0798 chromosome segregation SMC protein, putative YP_002352843.1 KEGG: dth:DICTH_0799 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: ATPase AAA YP_002352844.1 PFAM: GCN5-related N-acetyltransferase; KEGG: dth:DICTH_0800 bifunctional protein argHA YP_002352845.1 KEGG: dth:DICTH_0801 lipoprotein signal peptidase YP_002352846.1 PFAM: prolipoprotein diacylglyceryl transferase; KEGG: dth:DICTH_0802 prolipoprotein diacylglyceryl transferase YP_002352847.1 KEGG: dth:DICTH_0803 D-alanine--D-alanine ligase; TIGRFAM: D-alanine/D-alanine ligase; PFAM: protein of unknown function DUF201; D-alanine--D-alanine ligase domain protein YP_002352848.1 PFAM: RNA-binding S4 domain protein; KEGG: dth:DICTH_0804 RNA-binding protein, putative YP_002352849.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype YP_002352850.1 KEGG: dth:DICTH_0807 hypothetical protein YP_002352851.1 TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: dth:DICTH_0813 chaperonin GroL YP_002352852.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring YP_002352853.1 PFAM: glycosyl transferase group 1; KEGG: dth:DICTH_0815 glycosyl transferase YP_002352854.1 PFAM: glycosyl transferase group 1; KEGG: dth:DICTH_0816 glycosyl transferase, group 1 family protein YP_002352855.1 PFAM: conserved hypothetical protein; KEGG: dth:DICTH_0817 hypothetical protein YP_002352856.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity YP_002352857.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: dth:DICTH_0819 ribosomal-protein-alanine acetyltransferase YP_002352858.1 PFAM: peptidase M22 glycoprotease; KEGG: dth:DICTH_0820 glycoprotease family YP_002352859.1 PFAM: protein of unknown function UPF0079; KEGG: dth:DICTH_0821 hypothetical protein YP_002352860.1 PFAM: adenylosuccinate synthetase; KEGG: dth:DICTH_0822 adenylosuccinate synthetase YP_002352861.1 PFAM: malic protein domain protein; malic protein NAD-binding; KEGG: dth:DICTH_0823 NAD-dependent malic enzyme YP_002352862.1 TIGRFAM: aspartyl-tRNA synthetase; PFAM: GAD domain protein; tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: dth:DICTH_0824 aspartyl-tRNA synthetase YP_002352863.1 KEGG: dth:DICTH_0825 histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S) YP_002352864.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine YP_002352865.1 KEGG: dth:DICTH_0827 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp synthetase I) ((P)ppGpp synthetase); TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region YP_002352866.1 PFAM: major facilitator superfamily MFS_1; KEGG: dth:DICTH_0828 permeases of the major facilitator superfamily YP_002352867.1 PFAM: protein of unknown function UPF0016; KEGG: dth:DICTH_0829 transmembrane protein YP_002352868.1 TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 7; RNA polymerase Rpb2 domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2 domain 3; DNA-directed RNA polymerase beta subunit; KEGG: dth:DICTH_0830 DNA-directed RNA polymerase, beta subunit YP_002352869.1 KEGG: dth:DICTH_0831 DNA-directed RNA polymerase, beta' subunit; TIGRFAM: DNA-directed RNA polymerase, beta' subunit; DNA-directed RNA polymerase, beta'' subunit; PFAM: RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 1; RNA polymerase Rpb1 domain 5; RNA polymerase Rpb1 domain 4; SMART: RNA polymerase I subunit A domain protein YP_002352870.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance YP_002352871.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit YP_002352872.1 TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; KEGG: dth:DICTH_0834 translation elongation factor G YP_002352873.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_002352874.1 PFAM: ribosomal protein S10; KEGG: dth:DICTH_0836 ribosomal protein S10 YP_002352875.1 PFAM: ribosomal protein L3; KEGG: dth:DICTH_0837 ribosomal protein L3 YP_002352876.1 PFAM: ribosomal protein L4/L1e; KEGG: dth:DICTH_0838 ribosomal protein L4/L1 family YP_002352877.1 PFAM: Ribosomal protein L25/L23; KEGG: dth:DICTH_0839 ribosomal protein L23 YP_002352878.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation YP_002352879.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA YP_002352880.1 TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17; KEGG: dth:DICTH_0842 ribosomal protein L22 YP_002352881.1 KEGG: dth:DICTH_0843 ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; Ribosomal protein S3 domain; SMART: KH domain protein YP_002352882.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e YP_002352883.1 PFAM: ribosomal protein L29; KEGG: dth:DICTH_0845 ribosomal protein L29 YP_002352884.1 PFAM: ribosomal protein S17; KEGG: dth:DICTH_0846 ribosomal protein S17 YP_002352885.1 TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e; KEGG: dth:DICTH_0847 ribosomal protein L14 YP_002352886.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel YP_002352887.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13 YP_002352888.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif YP_002352889.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit YP_002352890.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance YP_002352891.1 binds 5S rRNA along with protein L5 and L25 YP_002352892.1 TIGRFAM: ribosomal protein S5; PFAM: ribosomal protein S5 domain protein; Ribosomal protein S5; KEGG: dth:DICTH_0854 ribosomal protein S5 YP_002352893.1 PFAM: ribosomal protein L15; KEGG: dth:DICTH_0855 ribosomal protein L15 YP_002352894.1 TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; KEGG: dth:DICTH_0856 preprotein translocase, SecY subunit YP_002352895.1 PFAM: adenylate kinase; adenylate kinase lid domain protein; KEGG: dth:DICTH_0857 adenylate kinase YP_002352896.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: dth:DICTH_0858 methionine aminopeptidase, type I YP_002352897.1 KEGG: dth:DICTH_0859 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein; SMART: RNA binding S1 domain protein YP_002352898.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif YP_002352899.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA YP_002352900.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3 YP_002352901.1 PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: dth:DICTH_0863 ribosomal protein S4 YP_002352902.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme YP_002352903.1 is a component of the macrolide binding site in the peptidyl transferase center YP_002352904.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dth:DICTH_0866 ABC-type cobalt transport system, ATPase component YP_002352905.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dth:DICTH_0867 cobalt import ATP-binding protein CbiO 1 YP_002352906.1 PFAM: cobalt transport protein; KEGG: dth:DICTH_0868 cobalt transport protein CbiQ YP_002352907.1 KEGG: dth:DICTH_0869 tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: tRNA pseudouridine synthase YP_002352908.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit YP_002352909.1 PFAM: ribosomal protein S9; KEGG: dth:DICTH_0871 ribosomal protein S9 YP_002352910.1 PFAM: AMMECR1 domain protein; KEGG: dth:DICTH_0872 hypothetical protein YP_002352911.1 PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dth:DICTH_0873 radical SAM domain protein YP_002352912.1 KEGG: dth:DICTH_0874 hypothetical protein YP_002352913.1 TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: dth:DICTH_0875 phosphoglucosamine mutase YP_002352914.1 TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); KEGG: dth:DICTH_0877 glucosamine--fructose-6-phosphate aminotransferase, isomerizing YP_002352915.1 TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; KEGG: dth:DICTH_0878 holo-(acyl-carrier-protein) synthase YP_002352916.1 PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: dth:DICTH_0879 tetratricopeptide repeat domain protein YP_002352917.1 KEGG: dth:DICTH_0880 alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: alanyl-tRNA synthetase class IIc; phosphoesterase DHHA1; Threonyl/alanyl tRNA synthetase SAD YP_002352918.1 PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: dth:DICTH_0881 hypothetical protein YP_002352919.1 TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; Threonyl/alanyl tRNA synthetase SAD; KEGG: dth:DICTH_0883 threonyl-tRNA synthetase YP_002352920.1 PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein; KEGG: dth:DICTH_0884 type IV prepilin leader peptidase PilD YP_002352921.1 KEGG: dth:DICTH_0885 prepilin-type N-terminal cleavage/methylation domain protein YP_002352922.1 KEGG: dth:DICTH_0886 hypothetical protein YP_002352923.1 KEGG: dth:DICTH_0887 prepilin-type N-terminal cleavage/methylation domain protein YP_002352924.1 KEGG: dth:DICTH_0888 hypothetical protein YP_002352925.1 KEGG: dth:DICTH_0889 hypothetical protein YP_002352926.1 PFAM: Fimbrial assembly family protein; KEGG: dth:DICTH_0890 fimbrial assembly membrane protein, putative YP_002352927.1 KEGG: dth:DICTH_0891 fimbrial assembly membrane protein, putative YP_002352928.1 KEGG: dth:DICTH_0892 hypothetical protein YP_002352929.1 PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; KEGG: dth:DICTH_0893 bacterial type II and III secretion system protein YP_002352930.1 PFAM: creatinase; peptidase M24; KEGG: dth:DICTH_0894 aminopeptidase YpdF YP_002352931.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA YP_002352932.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: dth:DICTH_0896 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_002352933.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: dth:DICTH_0897 acetyl-CoA carboxylase, biotin carboxylase YP_002352934.1 PFAM: protein of unknown function DUF322; KEGG: dth:DICTH_0898 hypothetical protein YP_002352935.1 KEGG: dth:DICTH_0899 lipoprotein, putative YP_002352936.1 KEGG: dth:DICTH_0900 hypothetical protein YP_002352937.1 TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: dth:DICTH_0901 transcription antitermination factor NusB YP_002352938.1 TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: transketolase; Transketolase domain protein; KEGG: dth:DICTH_0902 1-deoxy-D-xylulose-5-phosphate synthase YP_002352939.1 TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: dth:DICTH_0903 hemolysin A YP_002352940.1 PFAM: ATP-NAD/AcoX kinase; KEGG: dth:DICTH_0904 probable inorganic polyphosphate/ATP-NAD kinase (poly(P)/ATP NAD kinase) YP_002352941.1 KEGG: dth:DICTH_0905 DNA repair protein RecN; TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; SMART: ATPase AAA YP_002352942.1 PFAM: NUDIX hydrolase; KEGG: dth:DICTH_0906 ADP-ribose pyrophosphatase YP_002352943.1 TIGRFAM: alanine dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; alanine dehydrogenase/PNT domain protein; KEGG: dth:DICTH_0907 alanine dehydrogenase YP_002352944.1 PFAM: Hsp33 protein; KEGG: dth:DICTH_0908 chaperonin HslO YP_002352945.1 PFAM: extracellular solute-binding protein family 3; SMART: ionotropic glutamate receptor; KEGG: dth:DICTH_0909 glutamine ABC transporter, periplasmic glutamine-binding protein YP_002352946.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0910 glutamine ABC transporter, permease protein YP_002352947.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dth:DICTH_0911 ABC-type polar amino acid transport system, ATPase component YP_002352948.1 TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: dth:DICTH_0912 shikimate 5-dehydrogenase YP_002352949.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis YP_002352950.1 PFAM: 3-dehydroquinate synthase; KEGG: dth:DICTH_0914 3-dehydroquinate synthase YP_002352951.1 KEGG: dth:DICTH_0915 phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA YP_002352952.1 PFAM: prephenate dehydrogenase; KEGG: dth:DICTH_0916 prephenate dehydrogenase YP_002352953.1 TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: dth:DICTH_0917 3-phosphoshikimate 1-carboxyvinyltransferase YP_002352954.1 TIGRFAM: TrpR like protein, YerC/YecD; PFAM: Trp repressor; KEGG: dth:DICTH_0918 Trp operon repressor homolog YP_002352955.1 KEGG: dth:DICTH_0919 dipeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_002352956.1 KEGG: dth:DICTH_0920 DppD-1 dipeptide transport system ATP-binding protein DppD or DppF or oligopeptide transport system ATP-binding protein OppD or OppF; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_002352957.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0921 oligopeptide ABC transporter, permease protein, putative YP_002352958.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0922 oligopeptide ABC transporter, permease protein YP_002352959.1 KEGG: dth:DICTH_0923 oligopeptide binding protein, putative YP_002352960.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: dth:DICTH_0930 hydrogenase subunit gamma YP_002352961.1 TIGRFAM: glutamate synthase (NADPH), homotetrameric; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dth:DICTH_0931 glutamate synthase (NADPH), homotetrameric YP_002352962.1 PFAM: protein of unknown function DUF156; KEGG: dth:DICTH_0932 hypothetical protein YP_002352963.1 KEGG: dth:DICTH_0934 hypothetical protein YP_002352964.1 PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dth:DICTH_0936 NAD(FAD)-utilizing dehydrogenase YP_002352965.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: dth:DICTH_0935 exoenzymes regulatory protein AepA YP_002352966.1 PFAM: ferric-uptake regulator; KEGG: dth:DICTH_0937 ferric uptake regulatory protein YP_002352967.1 PFAM: arginine repressor; KEGG: dth:DICTH_0938 arginine repressor YP_002352968.1 PFAM: histidine kinase dimerisation/phosphoacceptor; KEGG: dth:DICTH_0939 ethanolamine utilization sensory transduction histidine kinase, putative YP_002352969.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A) YP_002352970.1 TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS III domain protein; MutS II domain protein; MutS IV domain protein; KEGG: dth:DICTH_0941 DNA mismatch repair protein MutS YP_002352971.1 TIGRFAM: DNA mismatch repair protein MutL; PFAM: ATP-binding region ATPase domain protein; DNA mismatch repair protein domain protein; MutL dimerisation; KEGG: dth:DICTH_0942 DNA mismatch repair protein MutL YP_002352972.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity YP_002352973.1 PFAM: aminotransferase class I and II; KEGG: dth:DICTH_0944 aminotransferase, class I and II YP_002352974.1 TIGRFAM: small GTP-binding protein; GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: dth:DICTH_0946 GTPase YP_002352975.1 PFAM: protein of unknown function DUF72; KEGG: dth:DICTH_0945 hypothetical protein YP_002352976.1 KEGG: dth:DICTH_0947 transcription termination factor Rho; TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor domain protein; Rho termination factor RNA-binding; SMART: ATPase AAA; Cold shock protein YP_002352977.1 PFAM: cytochrome b5; KEGG: dth:DICTH_0948 putative germination protein GerM YP_002352978.1 PFAM: metallophosphoesterase; KEGG: dth:DICTH_0949 serine/threonine protein phosphatase family protein YP_002352979.1 TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: dth:DICTH_0950 phosphodiesterase YfcE YP_002352980.1 TIGRFAM: trigger factor; PFAM: peptidylprolyl isomerase FKBP-type; trigger factor domain protein; trigger factor domain; KEGG: dth:DICTH_0959 trigger factor YP_002352981.1 KEGG: dth:DICTH_0960 ATP-dependent Clp protease, proteolytic subunit ClpP; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: peptidase S14 ClpP YP_002352982.1 KEGG: dth:DICTH_0961 ATP-dependent Clp protease, ATP-binding subunit ClpX; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA; zinc finger C4 domain protein; ATPase AAA; SMART: ATPase AAA YP_002352983.1 TIGRFAM: valyl-tRNA synthetase; KEGG: dth:DICTH_0962 valyl-tRNA synthetase YP_002352984.1 TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: dth:DICTH_0963 nitrogen fixation iron-sulphur protein rnfc YP_002352985.1 TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein; KEGG: dth:DICTH_0964 RnfD/NqrB YP_002352986.1 TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain protein; KEGG: dth:DICTH_0965 na+-transporting NADH:ubiquinone oxidoreductase, subunit 3 YP_002352987.1 TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: dth:DICTH_0966 na(+)-translocating NADH-quinone reductase subunit d (na(+)-translocating nqr subunit d) (na(+)-nqr subunit d) YP_002352988.1 TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: dth:DICTH_0967 na(+)-translocating NADH-quinone reductase subunit D YP_002352989.1 TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Fe-S cluster domain protein; KEGG: dth:DICTH_0968 iron-sulfur cluster-binding protein YP_002352990.1 PFAM: ApbE family lipoprotein; KEGG: dth:DICTH_0969 thiamine biosynthesis lipoprotein ApbE YP_002352991.1 PFAM: Heptaprenyl diphosphate synthase component I; KEGG: dth:DICTH_0970 heptaprenyl diphosphate synthase component I YP_002352992.1 KEGG: dth:DICTH_0971 hypothetical protein YP_002352993.1 KEGG: dth:DICTH_0972 hypothetical protein YP_002352994.1 PFAM: peptidase M23; KEGG: dth:DICTH_0973 peptidase M23/M37 YP_002352995.1 KEGG: dth:DICTH_0974 carboxyl-terminal protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; peptidase S41 YP_002352996.1 KEGG: dth:DICTH_0975 ComEA protein; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: helix-hairpin-helix motif; Competence protein ComEA helix-hairpin-helix region; SMART: Helix-hairpin-helix DNA-binding class 1 YP_002352997.1 PFAM: ComEC/Rec2-related protein; KEGG: dth:DICTH_0976 ComE operon protein 3, putative YP_002352998.1 TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; KEGG: dth:DICTH_0978 DNA polymerase III, delta subunit YP_002352999.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase YP_002353000.1 binds to the ribosome on the universally-conserved alpha-sarcin loop YP_002353001.1 KEGG: dth:DICTH_0980 5'/3'-nucleotidase SurE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE YP_002353002.1 KEGG: dth:DICTH_0981 putative oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: radical SAM protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB YP_002353003.1 PFAM: response regulator receiver; ANTAR domain protein; KEGG: dth:DICTH_0982 two-component system, regulatory protein YP_002353004.1 PFAM: glycosyl transferase family 4; KEGG: dth:DICTH_0983 undecaprenyl-phosphate YP_002353005.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs YP_002353006.1 PFAM: methyltransferase type 11; methyltransferase type 12; KEGG: dth:DICTH_0985 putative L-glutaminyl-2-N-methyltransferase StsG YP_002353007.1 TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: dth:DICTH_0986 putative regulatory protein, FmdB family YP_002353008.1 KEGG: dth:DICTH_0987 lipoprotein, putative YP_002353009.1 PFAM: ROK family protein; KEGG: dth:DICTH_0988 glucokinase YP_002353010.1 TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: dth:DICTH_0990 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_002353011.1 KEGG: dth:DICTH_0989 hypothetical protein YP_002353012.1 PFAM: tRNA synthetase class II (G H P and S); KEGG: dth:DICTH_0991 histidyl-tRNA synthetase, putative YP_002353013.1 KEGG: dth:DICTH_0992 ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region YP_002353014.1 PFAM: histidinol dehydrogenase; KEGG: dth:DICTH_0993 histidinol dehydrogenase YP_002353015.1 TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: dth:DICTH_0994 histidinol-phosphate aminotransferase YP_002353016.1 PFAM: imidazoleglycerol-phosphate dehydratase; KEGG: dth:DICTH_0995 imidazoleglycerol-phosphate dehydratase YP_002353017.1 TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; CobB/CobQ domain protein glutamine amidotransferase; KEGG: dth:DICTH_0996 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit YP_002353018.1 PFAM: histidine biosynthesis protein; KEGG: dth:DICTH_0997 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imid azole-4-carboxamide isomerase YP_002353019.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase YP_002353020.1 TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; KEGG: dth:DICTH_0999 histidine biosynthesis bifunctional protein hisIE YP_002353021.1 TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: dth:DICTH_1000 penicillin-binding protein 1A (PBP-1a) (PBP1a) YP_002353022.1 PFAM: conserved hypothetical protein; KEGG: dth:DICTH_1001 ATP-binding protein YP_002353023.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: dth:DICTH_1002 transporter YP_002353024.1 PFAM: phosphoglycerate kinase; KEGG: dth:DICTH_1003 phosphoglycerate kinase YP_002353025.1 PFAM: Roadblock/LC7 family protein; KEGG: dth:DICTH_1004 roadblock/LC7 domain superfamily YP_002353026.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate YP_002353027.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: dth:DICTH_1006 preprotein translocase, SecG subunit YP_002353028.1 PFAM: extracellular solute-binding protein family 5; KEGG: dth:DICTH_1007 oligopeptide/dipeptide ABC transporter, peptide-binding protein YP_002353029.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_1008 dipeptide transport system permease protein DppB YP_002353030.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_1009 dipeptide ABC transporter YP_002353031.1 PFAM: protein of unknown function DUF322; KEGG: dth:DICTH_1010 alkaline shock protein YP_002353032.1 PFAM: Dak phosphatase; KEGG: dth:DICTH_1011 DegV protein YP_002353033.1 KEGG: dth:DICTH_1012 ATP-dependent DNA helicase RecG; TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases YP_002353034.1 TIGRFAM: methyltransferase; PFAM: Protein of unknown function methylase putative; KEGG: dth:DICTH_1013 putative methyltransferase YP_002353035.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA YP_002353036.1 KEGG: dth:DICTH_1015 archaeal/vacuolar-type H+-ATPase subunit H YP_002353037.1 KEGG: dth:DICTH_1016 hypothetical protein YP_002353038.1 PFAM: ribosomal protein S15; KEGG: dth:DICTH_1017 ribosomal protein S15 YP_002353039.1 KEGG: dth:DICTH_1018 polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein YP_002353040.1 PFAM: peptidase M16 domain protein; KEGG: dth:DICTH_1019 peptidase, M16 family YP_002353041.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis YP_002353042.1 KEGG: dth:DICTH_1021 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase YP_002353043.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: dth:DICTH_1022 metallo-beta-lactamase family protein YP_002353044.1 PFAM: cell divisionFtsK/SpoIIIE; SMART: ATPase AAA; KEGG: dth:DICTH_1023 DNA translocase FtsK YP_002353045.1 PFAM: basic membrane lipoprotein; KEGG: dth:DICTH_1024 basic membrane protein family protein YP_002353046.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dth:DICTH_1025 sugar transport ATP-binding protein YP_002353047.1 PFAM: inner-membrane translocator; KEGG: dth:DICTH_1026 ABC sugar transporter, inner membrane subunit YP_002353048.1 PFAM: inner-membrane translocator; KEGG: dth:DICTH_1027 sugar ABC transporter, permease protein YP_002353049.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: dth:DICTH_1028 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_002353050.1 TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; KEGG: dth:DICTH_1029 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_002353051.1 KEGG: dth:DICTH_1030 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein YP_002353052.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains YP_002353053.1 PFAM: protein of unknown function DUF205; KEGG: dth:DICTH_1032 hypothetical protein YP_002353054.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: dth:DICTH_1033 glycerol-3-phosphate dehydrogenase [NAD(P)+] (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) YP_002353055.1 KEGG: dth:DICTH_1034 protein RecA; TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: ATPase AAA YP_002353056.1 KEGG: dth:DICTH_1036 oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_002353057.1 KEGG: dth:DICTH_1037 oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_002353058.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: dth:DICTH_1038 glutamyl-tRNA(Gln) amidotransferase, C subunit YP_002353059.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA YP_002353060.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB/Yqey domain protein; GatB region; GatB central domain protein; KEGG: dth:DICTH_1040 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B YP_002353061.1 PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: dth:DICTH_1041 type IV pilus assembly protein PilB YP_002353062.1 PFAM: type II secretion system protein; KEGG: dth:DICTH_1042 general secretion pathway protein F YP_002353063.1 KEGG: dth:DICTH_1043 xcmT3 YP_002353064.1 KEGG: dth:DICTH_1044 hypothetical protein YP_002353065.1 KEGG: dth:DICTH_1045 hypothetical protein YP_002353066.1 KEGG: dth:DICTH_1046 prepilin-type N-terminal cleavage/methylation domain protein YP_002353067.1 KEGG: dth:DICTH_1047 prokaryotic N-terminal methylation motif domain protein YP_002353068.1 KEGG: dth:DICTH_1048 hypothetical protein YP_002353069.1 PFAM: Fimbrial assembly family protein; KEGG: dth:DICTH_1049 fimbrial assembly protein (PilN) YP_002353070.1 KEGG: dth:DICTH_1050 hypothetical protein YP_002353071.1 KEGG: dth:DICTH_1052 hypothetical protein YP_002353072.1 KEGG: dth:DICTH_1051 prepilin-type N-terminal cleavage/methylation domain protein YP_002353073.1 KEGG: dth:DICTH_1053 hypothetical protein YP_002353074.1 KEGG: dth:DICTH_1054 hypothetical protein YP_002353075.1 KEGG: dth:DICTH_1055 hypothetical protein YP_002353076.1 KEGG: dth:DICTH_1056 prokaryotic N-terminal methylation motif domain protein YP_002353077.1 KEGG: dth:DICTH_1057 hypothetical protein YP_002353078.1 KEGG: dth:DICTH_1058 prepilin-type N-terminal cleavage/methylation domain protein YP_002353079.1 KEGG: dth:DICTH_1059 prokaryotic N-terminal methylation motif domain protein YP_002353080.1 KEGG: dth:DICTH_1060 acetolactate synthase, large subunit, biosynthetic type; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein YP_002353081.1 TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; acetolactate synthase small subunit; KEGG: dth:DICTH_1061 acetolactate synthase, small subunit YP_002353082.1 KEGG: dth:DICTH_1062 ketol-acid reductoisomerase; TIGRFAM: ketol-acid reductoisomerase; PFAM: acetohydroxy acid isomeroreductase; Acetohydroxy acid isomeroreductase catalytic domain protein YP_002353083.1 TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: dth:DICTH_1063 2-isopropylmalate synthase YP_002353084.1 KEGG: dth:DICTH_1064 3-isopropylmalate dehydratase, large subunit; TIGRFAM: homoaconitate hydratase family protein; 3-isopropylmalate dehydratase, large subunit; 3-isopropylmalate dehydratase; PFAM: aconitate hydratase domain protein YP_002353085.1 TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; KEGG: dth:DICTH_1065 3-isopropylmalate dehydratase, small subunit YP_002353086.1 KEGG: dth:DICTH_1066 3-isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_002353087.1 TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: dth:DICTH_1068 2-isopropylmalate synthase/homocitrate synthase family protein YP_002353088.1 TIGRFAM: galactokinase; PFAM: GHMP kinase; mevalonate and galactokinase; KEGG: dth:DICTH_1067 galactokinase YP_002353089.1 KEGG: dth:DICTH_1069 galactose-1-phosphate uridylyltransferase; TIGRFAM: galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein YP_002353090.1 KEGG: dth:DICTH_1071 1-deoxy-D-xylulose 5-phosphate reductoisomerase; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain protein YP_002353091.1 PFAM: phosphatidate cytidylyltransferase; KEGG: dth:DICTH_1072 phosphatidate cytidylyltransferase YP_002353092.1 KEGG: dth:DICTH_1073 di-trans,poly-cis-decaprenylcistransferase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase YP_002353093.1 PFAM: ribosome recycling factor; KEGG: dth:DICTH_1075 ribosome recycling factor YP_002353094.1 TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: dth:DICTH_1076 uridylate kinase YP_002353095.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu YP_002353096.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit YP_002353097.1 KEGG: dth:DICTH_1079 hypothetical protein YP_002353098.1 PFAM: protein of unknown function DUF150; KEGG: dth:DICTH_1080 YlxS YP_002353099.1 KEGG: dth:DICTH_1081 transcription termination factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: RNA binding S1 domain protein; NusA domain protein; SMART: KH domain protein YP_002353100.1 PFAM: protein of unknown function DUF448; KEGG: dth:DICTH_1082 ribosomal protein L7Ae family protein YP_002353101.1 TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; GTP-binding protein HSR1-related; elongation factor Tu domain 2 protein; translation initiation factor IF-2 domain protein; Miro domain protein; KEGG: dth:DICTH_1083 translation initiation factor IF-2 YP_002353102.1 PFAM: protein of unknown function DUF503; KEGG: dth:DICTH_1084 hypothetical protein YP_002353103.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock YP_002353104.1 PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: dth:DICTH_1086 MgpA protein YP_002353105.1 TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; KEGG: dth:DICTH_1087 tRNA pseudouridine synthase B YP_002353106.1 TIGRFAM: riboflavin biosynthesis protein RibF; cytidylate kinase; PFAM: cytidylate kinase region; FAD synthetase; Riboflavin kinase; KEGG: dth:DICTH_1088 riboflavin biosynthesis protein RibF YP_002353107.1 TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; KEGG: dth:DICTH_1089 biotin-[acetyl-CoA-carboxylase] ligase YP_002353108.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: haloacid dehalogenase; KEGG: dth:DICTH_1091 NagD protein YP_002353109.1 KEGG: dth:DICTH_1090 hypothetical protein YP_002353110.1 KEGG: dth:DICTH_1092 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: GAF domain protein; metal-dependent phosphohydrolase HD sub domain; Metal-dependent hydrolase HDOD; SMART: metal-dependent phosphohydrolase HD region YP_002353111.1 PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; CHASE2 domain protein; KEGG: dth:DICTH_1093 adenylate cyclase YP_002353112.1 KEGG: dth:DICTH_1094 hypothetical protein YP_002353113.1 TIGRFAM: transcriptional activator, Baf family; PFAM: Bvg accessory factor; KEGG: dth:DICTH_1095 Bvg accessory factor YP_002353114.1 KEGG: dth:DICTH_1096 membrane protein YP_002353115.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: dth:DICTH_1097 5,10-methenyltetrahydrofolate synthetase YP_002353116.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; electron transport protein SCO1/SenC; Redoxin domain protein; KEGG: dth:DICTH_1098 thiol:disulfide interchange protein YP_002353117.1 PFAM: radical SAM protein; KEGG: dth:DICTH_1108 radical SAM domain protein YP_002353118.1 PFAM: radical SAM protein; KEGG: dth:DICTH_1109 metallo cofactor biosynthesis protein YP_002353119.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: dth:DICTH_1110 deoxyribonuclease, TatD family YP_002353120.1 KEGG: dth:DICTH_1112 binding-protein-dependent transport systems inner membrane component, putative YP_002353121.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: dth:DICTH_1114 tRNA-specific adenosine deaminase YP_002353122.1 PFAM: CutA1 divalent ion tolerance protein; KEGG: dth:DICTH_1115 periplasmic divalent cation tolerance protein YP_002353123.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: haloacid dehalogenase; sucrose-6F-phosphate phosphohydrolase; haloacid dehalogenase type 3; KEGG: dth:DICTH_1116 phosphatase YidA, putative YP_002353124.1 KEGG: dth:DICTH_1117 radical SAM domain protein YP_002353125.1 PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dth:DICTH_1118 Fe-S oxidoreductases family 2 YP_002353126.1 TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: dth:DICTH_1119 rod shape-determining protein RodA YP_002353127.1 PFAM: conserved hypothetical protein; KEGG: dth:DICTH_1120 hypothetical protein YP_002353128.1 KEGG: dth:DICTH_1121 sensory box histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_002353129.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: dth:DICTH_1122 response regulator DrrA YP_002353130.1 PFAM: alanine racemase domain protein; KEGG: dth:DICTH_1123 hypothetical protein YP_002353131.1 KEGG: dth:DICTH_1124 hypothetical protein YP_002353132.1 PFAM: protein of unknown function DUF152; KEGG: dth:DICTH_1125 hypothetical protein YP_002353133.1 PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dth:DICTH_1126 radical SAM YP_002353134.1 TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: dth:DICTH_1127 cell division protein FtsZ YP_002353135.1 PFAM: cell division protein FtsA; KEGG: dth:DICTH_1128 cell division protein FtsA YP_002353136.1 KEGG: dth:DICTH_1129 hypothetical protein YP_002353137.1 KEGG: dth:DICTH_1130 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase domain protein YP_002353138.1 TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: dth:DICTH_1131 UDP-N-acetylmuramate--alanine ligase YP_002353139.1 PFAM: glycosyl transferase family 28; glycosyl transferase 28 domain; KEGG: dth:DICTH_1132 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase YP_002353140.1 PFAM: cell cycle protein; KEGG: dth:DICTH_1133 cell division protein FtsW, putative YP_002353141.1 TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: dth:DICTH_1134 UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_002353142.1 KEGG: dth:DICTH_1135 phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: glycosyl transferase family 4; phospho-N-acetylmuramoyl-pentapeptide transferase YP_002353143.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: dth:DICTH_1136 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase YP_002353144.1 TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: dth:DICTH_1137 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_002353145.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: dth:DICTH_1138 penicillin-binding protein 2B, putative YP_002353146.1 KEGG: dth:DICTH_1139 hypothetical protein YP_002353147.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: dth:DICTH_1140 S-adenosyl-methyltransferase MraW YP_002353148.1 TIGRFAM: MraZ protein; PFAM: protein of unknown function UPF0040; KEGG: dth:DICTH_1141 MraZ protein YP_002353149.1 KEGG: dth:DICTH_1144 hypothetical protein YP_002353150.1 PFAM: protein of unknown function DUF164; KEGG: dth:DICTH_1145 hypothetical protein YP_002353151.1 catalyzes the formation of L-tryptophan from indole and L-serine YP_002353152.1 TIGRFAM: serine O-acetyltransferase; KEGG: dth:DICTH_1155 serine O-acetyltransferase YP_002353153.1 KEGG: dth:DICTH_1157 thiamine transporter YP_002353154.1 TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase catalytic region; KEGG: dth:DICTH_1158 thiamine pyrophosphokinase YP_002353155.1 KEGG: dth:DICTH_1159 DNA gyrase, A subunit; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller YP_002353156.1 PFAM: protein of unknown function DUF101; KEGG: dth:DICTH_1160 hypothetical protein YP_002353157.1 PFAM: Protein of unknown function DUF933; KEGG: dth:DICTH_1161 GTP-binding protein YP_002353158.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: dth:DICTH_1162 RRF2 protein family YP_002353159.1 KEGG: dth:DICTH_1163 hypothetical protein YP_002353160.1 PFAM: PHP domain protein; KEGG: dth:DICTH_1164 DNA and RNA helicase YP_002353161.1 PFAM: ParB domain protein nuclease; KEGG: dth:DICTH_1165 transcriptional regulator YP_002353162.1 PFAM: metallophosphoesterase; KEGG: dth:DICTH_1166 Ser/Thr protein phosphatase family protein YP_002353163.1 catalyzes the reversible isomerization of glucose 6-phosphate to fructose 6-phosphate YP_002353164.1 PFAM: OsmC family protein; KEGG: dth:DICTH_1168 OsmC/Ohr family protein YP_002353165.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation YP_002353166.1 KEGG: dth:DICTH_1171 hypothetical protein YP_002353167.1 PFAM: Polyprenyl synthetase; KEGG: dth:DICTH_1170 geranylgeranyl pyrophosphate synthetase (GgpP synthetase) (ggps) YP_002353168.1 KEGG: dth:DICTH_1172 hypothetical protein YP_002353169.1 KEGG: dth:DICTH_1173 lactoylglutathione lyase and related lyases YP_002353170.1 KEGG: dth:DICTH_1174 nicotinate (nicotinamide) nucleotide adenylyltransferase; TIGRFAM: cytidyltransferase-related domain protein; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase YP_002353171.1 TIGRFAM: small GTP-binding protein; GTP-binding protein Obg/CgtA; PFAM: GTP-binding protein HSR1-related; GTP1/OBG sub domain protein; KEGG: dth:DICTH_1175 spo0B-associated GTP-binding protein YP_002353172.1 involved in the peptidyltransferase reaction during translation YP_002353173.1 PFAM: ribosomal protein L21; KEGG: dth:DICTH_1177 ribosomal protein L21 YP_002353174.1 PFAM: protein of unknown function DUF362; KEGG: dth:DICTH_1179 hypothetical protein YP_002353175.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: dth:DICTH_1178 oxidoreductase, putative YP_002353176.1 PFAM: integrase domain protein SAM domain protein; KEGG: ctc:CTC01567 DNA integration/recombination protein YP_002353177.1 KEGG: dth:DICTH_0238 lipoprotein, putative YP_002353178.1 KEGG: dth:DICTH_0238 lipoprotein, putative YP_002353179.1 KEGG: dol:Dole_1817 addiction module antitoxin YP_002353180.1 KEGG: dth:DICTH_0238 lipoprotein, putative YP_002353181.1 KEGG: dth:DICTH_0238 lipoprotein, putative YP_002353183.1 PFAM: helix-turn-helix domain protein; KEGG: cdf:CD1360 putative phage repressor YP_002353184.1 PFAM: protein of unknown function DUF955; KEGG: drm:Dred_0494 hypothetical protein YP_002353185.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: cpo:COPRO5265_0611 modification methylase, type III R/M system YP_002353186.1 PFAM: DNA polymerase beta domain protein region; KEGG: tme:Tmel_1694 DNA polymerase beta subunit YP_002353187.1 PFAM: type III restriction protein res subunit; SMART: DEAD-like helicases; KEGG: cpo:COPRO5265_0612 hypothetical protein YP_002353188.1 KEGG: fno:Fnod_0060 nuclease (SNase domain protein) YP_002353189.1 PFAM: Positive regulator of sigma(E) RseC/MucC; KEGG: dth:DICTH_1185 positive regulator of sigma(E), RseC/MucC superfamily YP_002353190.1 KEGG: dth:DICTH_1186 subunit of 2-oxoglutarate:ferredoxin oxidoredutase YP_002353191.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway YP_002353192.1 KEGG: dth:DICTH_1188 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein YP_002353193.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: dth:DICTH_1189 serine protease Do YP_002353194.1 PFAM: protein of unknown function DUF163; KEGG: dth:DICTH_1190 hypothetical protein YP_002353195.1 PFAM: permease YjgP/YjgQ family protein; KEGG: dth:DICTH_1191 permease YjgP/YjgQ, putative YP_002353196.1 KEGG: dth:DICTH_1192 MutS2 protein; TIGRFAM: MutS2 family protein; PFAM: DNA mismatch repair protein MutS domain protein; Smr protein/MutS2; SMART: MutS III domain protein YP_002353197.1 KEGG: dth:DICTH_1193 phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit YP_002353198.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily YP_002353199.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: dth:DICTH_1195 23S rRNA methyltransferase YP_002353200.1 TIGRFAM: ribosomal protein L20; KEGG: dth:DICTH_1196 ribosomal protein L20 YP_002353201.1 PFAM: ribosomal protein L35; KEGG: dth:DICTH_1197 ribosomal protein L35 YP_002353202.1 TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: dth:DICTH_1198 translation initiation factor IF-3 YP_002353203.1 TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: dth:DICTH_1199 RNA polymerase sigma factor RpoD YP_002353204.1 KEGG: dth:DICTH_1200 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase catalytic core domain; SMART: Toprim sub domain protein YP_002353205.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate YP_002353206.1 catalyzes the formation of phosphoenolpyruvate from pyruvate YP_002353207.1 KEGG: dth:DICTH_1203 glycyl-tRNA synthetase, beta subunit; TIGRFAM: glycyl-tRNA synthetase, beta subunit YP_002353208.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA YP_002353209.1 TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: dth:DICTH_1205 DNA repair protein RecO YP_002353210.1 KEGG: dth:DICTH_1206 deoxyribose-phosphate aldolase; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_002353211.1 TIGRFAM: small GTP-binding protein; GTP-binding protein Era; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; Miro domain protein; KEGG: dth:DICTH_1207 GTP-binding protein Era YP_002353212.1 TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; Cytidine and deoxycytidylate deaminase zinc-binding domain protein; KEGG: dth:DICTH_1208 cytidine deaminase YP_002353213.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer YP_002353214.1 PFAM: hypothetical protein; protein of unknown function DUF21; transporter-associated region; KEGG: dth:DICTH_1210 GldE YP_002353215.1 PFAM: diacylglycerol kinase; KEGG: dth:DICTH_1211 diacylglycerol kinase YP_002353216.1 PFAM: protein of unknown function UPF0054; KEGG: dth:DICTH_1213 hypothetical protein YP_002353217.1 PFAM: PhoH family protein; KEGG: dth:DICTH_1214 PhoH protein YP_002353218.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA YP_002353219.1 KEGG: dth:DICTH_1216 hypothetical protein; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: radical SAM protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB YP_002353220.1 PFAM: protein of unknown function DUF558; KEGG: dth:DICTH_1217 hypothetical protein YP_002353221.1 TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein; KEGG: dth:DICTH_1218 heat-inducible transcription repressor HrcA YP_002353222.1 PFAM: protein of unknown function DUF114; KEGG: dth:DICTH_1219 periplasmic serine protease YP_002353223.1 PFAM: Rhomboid family protein; KEGG: dth:DICTH_1220 rhomboid family protein YP_002353224.1 TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: dth:DICTH_1221 endoribonuclease L-PSP, putative YP_002353225.1 TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; KEGG: dth:DICTH_1222 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family YP_002353226.1 TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; KEGG: dth:DICTH_1223 ribonuclease PH YP_002353227.1 KEGG: dth:DICTH_1224 hypothetical protein YP_002353228.1 TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: dth:DICTH_1225 fumarate hydratase, beta subunit YP_002353229.1 KEGG: dth:DICTH_1226 fumarate hydratase; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region YP_002353230.1 KEGG: dth:DICTH_1227 hypothetical protein YP_002353231.1 KEGG: dth:DICTH_1228 hypothetical protein YP_002353232.1 PFAM: methylaspartate ammonia-lyase; KEGG: dth:DICTH_1229 methylaspartate ammonia-lyase YP_002353233.1 TIGRFAM: methylaspartate mutase, E subunit; PFAM: methylaspartate mutase E subunit; KEGG: dth:DICTH_1230 methylaspartate mutase, E subunit YP_002353234.1 KEGG: dth:DICTH_1231 glutamate mutase, MutL YP_002353235.1 converts methylaspartate to L-glutamate YP_002353236.1 TIGRFAM: peptidase T-like protein; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: dth:DICTH_1233 hypothetical protein YP_002353237.1 KEGG: dth:DICTH_1234 glutamate racemase; TIGRFAM: glutamate racemase; PFAM: Asp/Glu/hydantoin racemase YP_002353238.1 PFAM: cell wall hydrolase/autolysin; KEGG: dth:DICTH_1235 cell wall hydrolase/autolysin YP_002353239.1 TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; KEGG: dth:DICTH_1237 SsrA-binding protein YP_002353240.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: dth:DICTH_1238 UDP-glucose 4-epimerase YP_002353241.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: dth:DICTH_1239 pleiotropic regulatory protein YP_002353242.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: dth:DICTH_1240 lipopolysaccharide biosynthesis YP_002353243.1 TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: dth:DICTH_1241 acetylglutamate kinase YP_002353244.1 KEGG: dth:DICTH_1242 MglA protein YP_002353245.1 PFAM: Roadblock/LC7 family protein; KEGG: dth:DICTH_1243 MglB protein YP_002353246.1 KEGG: dth:DICTH_1244 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: ATPase AAA YP_002353247.1 PFAM: ribosomal protein L9; KEGG: dth:DICTH_1245 ribosomal protein L9 YP_002353248.1 KEGG: dth:DICTH_1246 hypothetical protein YP_002353249.1 PFAM: ribosomal protein S18; KEGG: dth:DICTH_1247 ribosomal protein S18 YP_002353250.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: dth:DICTH_1248 single-strand DNA-binding protein YP_002353251.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21 YP_002353252.1 KEGG: dth:DICTH_1250 branched-chain amino acid aminotransferase; TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV YP_002353253.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: dth:DICTH_1251 diaminopimelate decarboxylase YP_002353254.1 PFAM: homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding; KEGG: dth:DICTH_1252 homoserine dehydrogenase YP_002353255.1 TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: dth:DICTH_1253 threonine synthase YP_002353256.1 KEGG: dth:DICTH_1254 homoserine kinase; TIGRFAM: homoserine kinase; PFAM: GHMP kinase; GHMP kinase domain protein YP_002353257.1 TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region; KEGG: dth:DICTH_1255 aspartate-semialdehyde dehydrogenase YP_002353258.1 KEGG: dth:DICTH_1256 asparate kinase, monofunctional class; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein YP_002353259.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors YP_002353260.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit YP_002353261.1 in Escherichia coli and methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA YP_002353262.1 binds directly to 23S ribosomal RNA YP_002353263.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: KOW domain protein; NGN domain protein; KEGG: dth:DICTH_1261 transcription termination/antitermination factor NusG YP_002353264.1 TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: dth:DICTH_1262 preprotein translocase, SecE subunit YP_002353265.1 PFAM: ribosomal protein L33; KEGG: dth:DICTH_1264 ribosomal protein L33 YP_002353266.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_002353267.1 PFAM: RNA binding S1 domain protein; KEGG: dth:DICTH_1270 ribosomal protein S1, putative YP_002353268.1 KEGG: dth:DICTH_1271 hypothetical protein YP_002353269.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: dth:DICTH_1272 hypothetical protein YP_002353270.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA YP_002353271.1 TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit domain protein; KEGG: dth:DICTH_1274 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent YP_002353272.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: dth:DICTH_1275 tetratricopeptide repeat domain protein YP_002353273.1 PFAM: phosphofructokinase; KEGG: dth:DICTH_1276 pyrophosphate--fructose 6-phosphate 1-phosphotransferase YP_002353274.1 KEGG: dth:DICTH_1277 hypothetical protein YP_002353275.1 PFAM: histidine triad (HIT) protein; KEGG: dth:DICTH_1278 hit histidine triad protein YP_002353276.1 KEGG: dth:DICTH_1280 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase YP_002353277.1 KEGG: dth:DICTH_1281 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: acetyl-CoA carboxylase alpha subunit YP_002353278.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; KEGG: dth:DICTH_1282 acetyl-CoA carboxylase, carboxyl transferase, beta subunit YP_002353279.1 KEGG: dth:DICTH_1283 DNA polymerase III alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein YP_002353280.1 KEGG: dth:DICTH_1284 hypothetical protein YP_002353281.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: dth:DICTH_1285 DNA polymerase, bacteriophage-type YP_002353282.1 KEGG: dth:DICTH_1286 protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_002353283.1 PFAM: Spermine synthase; methyltransferase type 12; KEGG: dth:DICTH_1287 spermidine synthase 1 YP_002353284.1 PFAM: acylphosphatase; KEGG: dth:DICTH_1288 acylphosphatase YP_002353285.1 PFAM: UvrD/REP helicase; KEGG: dth:DICTH_1291 ATP-dependent DNA helicase PcrA YP_002353286.1 TIGRFAM: cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE; KEGG: dth:DICTH_1292 cell division topological specificity factor MinE YP_002353287.1 TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: dth:DICTH_1293 septum site-determining protein MinD YP_002353288.1 PFAM: Septum formation inhibitor MinC; KEGG: dth:DICTH_1294 probable septum site-determining protein MinC YP_002353289.1 KEGG: dth:DICTH_1295 penicillin-binding protein 2; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_002353290.1 KEGG: dth:DICTH_1296 hypothetical protein YP_002353291.1 PFAM: Rod shape-determining protein MreC; KEGG: dth:DICTH_1297 rod shape-determining protein MreC YP_002353292.1 functions in MreBCD complex in some organisms YP_002353293.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: dth:DICTH_1299 septum formation protein Maf YP_002353294.1 PFAM: protein of unknown function DUF161; KEGG: dth:DICTH_1300 YitT family protein YP_002353295.1 KEGG: dth:DICTH_1301 lipopolysaccharide biosynthesis protein, putative; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF YP_002353296.1 PFAM: polysaccharide pyruvyl transferase; KEGG: dth:DICTH_1302 CsaB protein YP_002353297.1 TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: dth:DICTH_1303 peptide chain release factor 2 YP_002353298.1 TIGRFAM: preprotein translocase, SecA subunit; PFAM: helicase domain protein; SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; KEGG: dth:DICTH_1304 preprotein translocase, SecA subunit YP_002353299.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: dth:DICTH_1305 ribosomal subunit interface protein YP_002353300.1 KEGG: dth:DICTH_1306 hypothetical protein YP_002353301.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: dth:DICTH_1307 UDP-N-acetylglucosamine 2-epimerase YP_002353302.1 TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: dth:DICTH_1308 agmatinase, putative YP_002353303.1 TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; PFAM: S-adenosylmethionine decarboxylase related; KEGG: dth:DICTH_1309 S-adenosylmethionine decarboxylase proenzyme (AdoMetDC)(SamDC) YP_002353304.1 KEGG: dth:DICTH_1310 phosphoribosylamine--glycine ligase; TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201 YP_002353305.1 TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: dth:DICTH_1311 phosphoribosylglycinamide formyltransferase YP_002353306.1 KEGG: dth:DICTH_1312 phosphoribosylformylglycinamidine cyclo-ligase; TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_002353307.1 TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; KEGG: dth:DICTH_1313 amidophosphoribosyltransferase YP_002353308.1 KEGG: dth:DICTH_1314 phosphoribosylformylglycinamidine synthase II; TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_002353309.1 TIGRFAM: phosphoribosylformylglycinamidine synthase I; KEGG: dth:DICTH_1315 phosphoribosylformylglycinamidine synthase I YP_002353310.1 TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS; KEGG: dth:DICTH_1316 phosphoribosylformylglycinamidine synthase, PurS protein YP_002353311.1 TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; KEGG: dth:DICTH_1317 adenylosuccinate lyase YP_002353312.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis YP_002353313.1 PFAM: phosphoribosyltransferase; KEGG: dth:DICTH_1320 purine phosphoribosyltransferase YP_002353314.1 PFAM: NUDIX hydrolase; glycosyl transferase group 1; KEGG: dth:DICTH_1321 glycosyl transferase, group 1 YP_002353315.1 PFAM: transferase hexapeptide repeat containing protein; nucleotidyl transferase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; KEGG: dth:DICTH_1322 mannose-1-phosphate guanyltransferase YP_002353316.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient YP_002353317.1 TIGRFAM: isoleucyl-tRNA synthetase; KEGG: dth:DICTH_1324 isoleucyl-tRNA synthetase YP_002353318.1 PFAM: periplasmic binding protein; KEGG: dth:DICTH_1325 ferric ion ABC transporter YP_002353319.1 PFAM: transport system permease protein; KEGG: dth:DICTH_1326 heme/hemin ABC transporter, permease protein YP_002353320.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dth:DICTH_1328 ferrichrome ABC transporter ATP-binding protein YP_002353321.1 KEGG: dth:DICTH_1327 hypothetical protein YP_002353322.1 PFAM: ribulose-phosphate 3-epimerase; KEGG: dth:DICTH_1329 ribulose-phosphate 3-epimerase YP_002353323.1 PFAM: PASTA domain containing protein; KEGG: dth:DICTH_1330 eukaryotic-type protain kinase, putative YP_002353324.1 TIGRFAM: radical SAM enzyme, Cfr family; PFAM: radical SAM protein; KEGG: dth:DICTH_1331 radical SAM enzyme, Cfr family YP_002353325.1 TIGRFAM: sun protein; RNA methylase, NOL1/NOP2/sun family; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: dth:DICTH_1332 ribosomal RNA small subunit methyltransferase B YP_002353326.1 PFAM: peptidase membrane zinc metallopeptidase putative; KEGG: dth:DICTH_1333 hypothetical protein YP_002353327.1 TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: dth:DICTH_1334 methionyl-tRNA formyltransferase YP_002353328.1 KEGG: dth:DICTH_1335 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase YP_002353329.1 TIGRFAM: primosomal protein N'; KEGG: dth:DICTH_1336 primosomal protein N', putative YP_002353330.1 TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; KEGG: dth:DICTH_1337 DNA-directed RNA polymerase, omega subunit YP_002353331.1 Essential for recycling GMP and indirectly, cGMP YP_002353332.1 PFAM: protein of unknown function DUF370; KEGG: dth:DICTH_1339 hypothetical protein YP_002353333.1 PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: dth:DICTH_1340 hypothetical protein YP_002353334.1 PFAM: uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: dth:DICTH_1342 hypothetical protein YP_002353335.1 TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; KEGG: dth:DICTH_1343 fatty acid/phospholipid synthesis protein PlsX YP_002353336.1 KEGG: dth:DICTH_1345 pilus retraction protein PilT; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: ATPase AAA YP_002353337.1 KEGG: dth:DICTH_1344 glycosyl transferase YP_002353338.1 PFAM: glycosyl transferase group 1; KEGG: dth:DICTH_1346 mannosyltransferase YP_002353339.1 KEGG: pth:PTH_0924 hypothetical protein YP_002353342.1 PFAM: glycosyl transferase family 2; KEGG: pna:Pnap_0285 glycosyl transferase, family 2 YP_002353344.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis YP_002353345.1 PFAM: shikimate kinase; KEGG: dth:DICTH_1348 shikimate kinase YP_002353346.1 KEGG: dth:DICTH_1349 hypothetical protein YP_002353348.1 PFAM: Spermine synthase; KEGG: dth:DICTH_1350 spermidine synthase 2 YP_002353349.1 TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; PFAM: S-adenosylmethionine decarboxylase related; KEGG: dth:DICTH_1351 S-adenosylmethionine decarboxylase superfamily YP_002353350.1 TIGRFAM: 2'-5' RNA ligase; PFAM: phosphoesterase HXTX; KEGG: dth:DICTH_1352 2'-5' RNA ligase YP_002353351.1 TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: dth:DICTH_1353 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_002353352.1 KEGG: dth:DICTH_1354 hypothetical protein; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme YliG; PFAM: radical SAM protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB YP_002353353.1 SMART: helix-turn-helix domain protein; KEGG: dth:DICTH_1355 transcriptional regulator, putative YP_002353354.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: dth:DICTH_1356 ribosomal large subunit pseudouridine synthase B YP_002353355.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: dth:DICTH_1357 segregation and condensation protein B YP_002353356.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: dth:DICTH_1358 segregation and condensation protein A YP_002353357.1 KEGG: dth:DICTH_1359 tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_002353358.1 PFAM: peptidase M50; KEGG: dth:DICTH_1360 Zn-dependent protease YP_002353359.1 TIGRFAM: pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain; glycosyl transferase, family 3-like; KEGG: dth:DICTH_1361 pyrimidine-nucleoside phosphorylase YP_002353360.1 KEGG: dth:DICTH_1362 phosphopentomutase; TIGRFAM: phosphopentomutase; PFAM: metalloenzyme domain protein; phosphopentomutase domain protein YP_002353361.1 TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: dth:DICTH_1363 tyrosine recombinase XerD YP_002353362.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: dth:DICTH_1364 RNA methyltransferase, TrmH family, group 3 YP_002353363.1 KEGG: dth:DICTH_1365 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase YP_002353364.1 KEGG: dth:DICTH_1366 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_002353365.1 PFAM: PilT protein domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Nucleotide binding protein PINc; KEGG: dth:DICTH_1367 pin/TRAM domain protein YP_002353366.1 non-specific DNA-binding; scans chromosomes during sporulation for DNA-damage; delays initiation of sporulation; participates in a checkpoint signaling cascade for cell-cycle progression and DNA repair YP_002353367.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents YP_002353368.1 PFAM: UvrB/UvrC protein; ATPase AAA; Clp domain protein; Torsin; ATPase associated with various cellular activities AAA_5; ATPase AAA; SMART: ATPase AAA; KEGG: dth:DICTH_1370 negative regulator of genetic competence ClpC/MecB YP_002353369.1 PFAM: ATP:guanido phosphotransferase; KEGG: dth:DICTH_1371 McsB YP_002353370.1 PFAM: UvrB/UvrC protein; KEGG: dth:DICTH_1372 UvrB/UvrC motif domain protein YP_002353371.1 PFAM: SNO glutamine amidotransferase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: dth:DICTH_1373 glutamine amidotransferase subunit PdxT YP_002353372.1 with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate YP_002353373.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision YP_002353374.1 KEGG: dth:DICTH_1376 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase YP_002353375.1 KEGG: dth:DICTH_1377 Zn-dependent hydrolases of the metallo-beta-lactamase superfamily YP_002353376.1 KEGG: dth:DICTH_1378 hdig domain protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_002353377.1 PFAM: protein of unknown function DUF988; KEGG: dth:DICTH_1379 transporter YP_002353378.1 TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein; KEGG: dth:DICTH_1380 tyrosyl-tRNA synthetase YP_002353379.1 PFAM: 3D domain protein; KEGG: dth:DICTH_1381 3D domain family YP_002353380.1 TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; KEGG: dth:DICTH_1382 dimethyladenosine transferase YP_002353381.1 TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: dth:DICTH_1383 4-diphosphocytidyl-2C-methyl-D-erythritol kinase YP_002353382.1 TIGRFAM: threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; amino acid-binding ACT domain protein; KEGG: dth:DICTH_1384 threonine dehydratase YP_002353383.1 PFAM: peptidase M42 family protein; KEGG: dth:DICTH_1385 peptidase, M42 family YP_002353384.1 PFAM: thiamine biosynthesis protein; protein of unknown function DUF814; KEGG: dth:DICTH_1386 tRNA methyl transferase YP_002353385.1 PFAM: hypothetical protein; phosphoesterase RecJ domain protein; Polynucleotide adenylyltransferase region; KEGG: dth:DICTH_1388 polyA polymerase family protein YP_002353386.1 KEGG: dth:DICTH_1387 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein YP_002353387.1 TIGRFAM: ATPase V subunit D; PFAM: H+transporting two-sector ATPase D subunit; KEGG: dth:DICTH_1389 ATPase V subunit D YP_002353388.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the B subunit is part of the catalytic core of the ATP synthase complex YP_002353389.1 PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: dth:DICTH_1391 ATP synthase alpha/beta family, nucleotide-binding domain protein YP_002353390.1 KEGG: dth:DICTH_1392 ATP synthase YP_002353391.1 KEGG: dth:DICTH_1393 hypothetical protein YP_002353392.1 KEGG: dth:DICTH_1394 hypothetical protein YP_002353393.1 PFAM: H+transporting two-sector ATPase C subunit; KEGG: dth:DICTH_1395 V-type sodium ATP synthase subunit K (Na(+)-translocating ATPase subunit K) YP_002353394.1 PFAM: V-type ATPase 116 kDa subunit; KEGG: dth:DICTH_1396 V-type ATPase 116kDa subunit family YP_002353395.1 KEGG: dth:DICTH_1397 chromosome partition protein YP_002353396.1 required for 70S ribosome assembly YP_002353397.1 PFAM: protein of unknown function DUF52; KEGG: dth:DICTH_1399 hypothetical protein YP_002353398.1 PFAM: peptidyl-tRNA hydrolase; KEGG: dth:DICTH_1400 peptidyl-tRNA hydrolase YP_002353399.1 KEGG: dth:DICTH_1401 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases YP_002353400.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: dth:DICTH_1402 foldase protein PrsA YP_002353401.1 TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: dth:DICTH_1403 MazG YP_002353402.1 PFAM: histone family protein DNA-binding protein; KEGG: dth:DICTH_1404 non-specific DNA-binding protein YP_002353403.1 TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); glycine cleavage T-protein barrel; KEGG: dth:DICTH_1405 glycine cleavage system T protein YP_002353404.1 TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: dth:DICTH_1406 glycine cleavage system H protein YP_002353405.1 PFAM: glycine cleavage system P-protein; KEGG: dth:DICTH_1407 glycine cleavage system P-protein YP_002353406.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein YP_002353407.1 SMART: Elongator protein 3/MiaB/NifB; KEGG: dth:DICTH_1409 radical SAM domain protein YP_002353408.1 PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dth:DICTH_1410 radical SAM domain protein YP_002353409.1 TIGRFAM: metal dependent phophohydrolase; PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; KEGG: dth:DICTH_1411 poly A polymerase, putative YP_002353410.1 KEGG: dth:DICTH_1413 probable DNA double-strand break repair RAD50 ATPase, putative YP_002353411.1 KEGG: dth:DICTH_1412 hypothetical protein YP_002353412.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: dth:DICTH_1414 recombinase YP_002353413.1 TIGRFAM: gid protein; PFAM: glucose-inhibited division protein A; KEGG: dth:DICTH_1415 gid protein YP_002353414.1 KEGG: dth:DICTH_1416 DNA topoisomerase I; TIGRFAM: DNA topoisomerase I; PFAM: TOPRIM domain protein; DNA topoisomerase type IA central domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I ATP-binding; DNA topoisomerase I DNA-binding; Toprim sub domain protein YP_002353415.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: dth:DICTH_1417 DNA processing protein DprA YP_002353416.1 PFAM: xanthine/uracil/vitamin C permease; KEGG: dth:DICTH_1418 xanthine/uracil permease family protein YP_002353417.1 KEGG: dth:DICTH_1419 putative Mg chelatase; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA YP_002353418.1 PFAM: protein of unknown function UPF0102; KEGG: dth:DICTH_1420 hypothetical protein YP_002353419.1 PFAM: ribonuclease HII/HIII; KEGG: dth:DICTH_1421 ribonuclease HII YP_002353420.1 KEGG: dth:DICTH_1422 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein YP_002353421.1 PFAM: ribosomal protein L19; KEGG: dth:DICTH_1423 ribosomal protein L19 YP_002353422.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA YP_002353423.1 TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; KEGG: dth:DICTH_1425 16S rRNA processing protein RimM YP_002353424.1 KEGG: dth:DICTH_1426 hypothetical protein YP_002353425.1 PFAM: ribosomal protein S16; KEGG: dth:DICTH_1427 ribosomal protein S16 YP_002353426.1 KEGG: dth:DICTH_1428 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: ATPase AAA YP_002353427.1 PFAM: glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; KEGG: dth:DICTH_1429 beta-glucuronidase YP_002353428.1 PFAM: regulatory protein ArsR; KEGG: dth:DICTH_1430 transcriptional regulator YP_002353429.1 PFAM: protein of unknown function DUF554; KEGG: dth:DICTH_1432 hypothetical protein YP_002353430.1 PFAM: protein of unknown function DUF1121; KEGG: dth:DICTH_1431 hypothetical protein YP_002353431.1 TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: glutamine amidotransferase class-I; GMP synthase domain protein; PP-loop domain protein; KEGG: dth:DICTH_1433 GMP synthase (glutamine-hydrolyzing) YP_002353432.1 PFAM: protein of unknown function DUF111; KEGG: dth:DICTH_1434 hypothetical protein YP_002353433.1 PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: dth:DICTH_1435 circadian phase modifier CpmA YP_002353434.1 KEGG: dth:DICTH_1436 hypothetical protein YP_002353435.1 KEGG: dth:DICTH_1438 DNA gyrase, B subunit; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; SMART: DNA topoisomerase II YP_002353436.1 PFAM: protein of unknown function DUF721; KEGG: dth:DICTH_1439 hypothetical protein YP_002353437.1 TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; KEGG: dth:DICTH_1440 DNA replication and repair protein RecF YP_002353438.1 TIGRFAM: S4 domain protein YaaA; PFAM: RNA-binding S4 domain protein; KEGG: dth:DICTH_1441 hypothetical protein YP_002353439.1 KEGG: dth:DICTH_1442 DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain YP_002353440.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: dth:DICTH_1443 RRF2 protein family YP_002353441.1 KEGG: dth:DICTH_1444 FeS assembly ATPase SufC; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter; SMART: ATPase AAA YP_002353442.1 PFAM: SufBD protein; KEGG: dth:DICTH_1445 ABC transporter, ATP-binding protein YP_002353443.1 TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; KEGG: dth:DICTH_1446 methyltransferase GidB YP_002353444.1 KEGG: dth:DICTH_1447 hypothetical protein YP_002353445.1 PFAM: regulatory protein ArsR; KEGG: dth:DICTH_1448 transcriptional regulatory protein YP_002353446.1 KEGG: dth:DICTH_1449 hypothetical protein YP_002353447.1 PFAM: heat shock protein Hsp20; KEGG: dth:DICTH_1450 small heat shock protein YP_002353448.1 KEGG: dth:DICTH_1451 ATP-dependent protease La; TIGRFAM: ATP-dependent protease La; PFAM: peptidase S16 lon domain protein; ATPase AAA; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA YP_002353449.1 KEGG: dth:DICTH_1452 hypothetical protein YP_002353450.1 KEGG: dth:DICTH_1453 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; dihydrodipicolinate reductase YP_002353451.1 TIGRFAM: leucyl-tRNA synthetase; KEGG: dth:DICTH_1454 leucyl-tRNA synthetase YP_002353452.1 KEGG: dth:DICTH_1455 hypothetical protein YP_002353453.1 PFAM: ABC transporter; KEGG: dth:DICTH_1456 ABC transporter family YP_002353454.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dth:DICTH_1457 ABC transporter, ATP-binding protein YP_002353455.1 PFAM: ferric-uptake regulator; KEGG: dth:DICTH_1458 ferric uptake regulation protein YP_002353456.1 PFAM: FeoA family protein; KEGG: dth:DICTH_1459 hypothetical protein YP_002353457.1 TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; nucleoside recognition domain protein; Miro domain protein; KEGG: dth:DICTH_1460 ferrous iron transport protein B YP_002353458.1 KEGG: pho:PH1204.1n hypothetical protein YP_002353459.1 KEGG: dth:DICTH_1461 orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase YP_002353460.1 TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate dehydrogenase; KEGG: dth:DICTH_1462 dihydroorotate dehydrogenase YP_002353461.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: dth:DICTH_1463 dihydroorotate dehydrogenase electron transfer subunit YP_002353462.1 KEGG: dth:DICTH_1464 dihydroorotase; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase YP_002353463.1 KEGG: dth:DICTH_1465 aspartate carbamoyltransferase; TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain YP_002353464.1 PFAM: phosphoribosyltransferase; KEGG: dth:DICTH_1466 PyrR bifunctional protein YP_002353465.1 KEGG: dth:DICTH_1468 tRNA (guanine-N(7)-)-methyltransferase (tRNA(m7G46)-methyltransferase); TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; PFAM: putative methyltransferase YP_002353466.1 PFAM: dienelactone hydrolase; KEGG: dth:DICTH_1469 hydrolases of the alpha/beta superfamily YP_002353467.1 PFAM: YHS domain protein; SMART: TRASH domain protein; KEGG: dth:DICTH_1470 copper-transporting P-type ATPase YP_002353468.1 TIGRFAM: PAS sensor protein; PFAM: Hemerythrin HHE cation binding domain protein; PAS fold-4 domain protein; KEGG: dth:DICTH_0189 sensory box protein YP_002353470.1 PFAM: protein of unknown function DUF265; KEGG: dth:DICTH_1472 hypothetical protein YP_002353471.1 PFAM: carbohydrate kinase FGGY; KEGG: dth:DICTH_1473 fggy family of carbohydrate kinase, N-terminal domain protein YP_002353472.1 PFAM: extracellular solute-binding protein family 1; KEGG: dth:DICTH_1474 bacterial extracellular solute-binding protein, putative YP_002353473.1 PFAM: glycoside hydrolase family 5; protein of unknown function DUF291; KEGG: dth:DICTH_1476 endoglucanase B YP_002353474.1 KEGG: dth:DICTH_1477 hypothetical protein YP_002353475.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_1478 putative transport protein YP_002353476.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_1479 lactose ABC transporter permease YP_002353477.1 KEGG: dth:DICTH_1480 hypothetical protein YP_002353478.1 PFAM: NHL repeat containing protein; KEGG: dth:DICTH_1481 hypothetical protein YP_002353479.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_1482 sugar transport system permease protein, putative YP_002353480.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_1483 ABC transporter, membrane spanning protein (sugar) YP_002353481.1 PFAM: extracellular solute-binding protein family 1; KEGG: dth:DICTH_1484 bacterial extracellular solute-binding protein YP_002353482.1 PFAM: extracellular solute-binding protein family 1; KEGG: dth:DICTH_1485 bacterial extracellular solute-binding protein, putative YP_002353483.1 PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: dth:DICTH_1486 transcriptional regulator, putative YP_002353484.1 PFAM: phosphoglycerate mutase; KEGG: dth:DICTH_1487 phosphoglycerate mutase/fructose-2,6-bisphosphatase YP_002353485.1 PFAM: Clp domain protein; KEGG: dth:DICTH_1489 ATP-dependent Clp protease, ATP-binding subunit ClpC, putative YP_002353486.1 KEGG: dth:DICTH_1490 Zn-dependent hydrolases of the metallo-beta-lactamase superfamily YP_002353487.1 PFAM: PHP domain protein; SMART: DNA polymerase X; phosphoesterase PHP domain protein; Helix-hairpin-helix DNA-binding class 1; KEGG: dth:DICTH_1491 DNA polymerase beta family YP_002353488.1 PFAM: tRNA methyltransferase complex GCD14 subunit; KEGG: nfa:nfa31820 hypothetical protein YP_002353489.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: dth:DICTH_1492 single-stranded-DNA-specific exonuclease RecJ YP_002353490.1 TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: dth:DICTH_1493 protein-export membrane protein SecF YP_002353491.1 TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecD; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: dth:DICTH_1494 protein-export membrane protein SecD YP_002353492.1 TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: dth:DICTH_1495 preprotein translocase, YajC subunit YP_002353493.1 KEGG: dth:DICTH_1496 queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylase, various specificities; queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase YP_002353494.1 TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; KEGG: dth:DICTH_1497 S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_002353495.1 TIGRFAM: SpoIID/LytB domain protein; stage II sporulation protein D; PFAM: Stage II sporulation D domain protein; KEGG: dth:DICTH_1498 cytoplasmic membrane protein YP_002353496.1 KEGG: dth:DICTH_1499 hypothetical protein YP_002353497.1 PFAM: diacylglycerol kinase catalytic region; KEGG: dth:DICTH_1500 hypothetical protein YP_002353498.1 PFAM: protein of unknown function DUF208; KEGG: dth:DICTH_1501 hypothetical protein YP_002353499.1 KEGG: dth:DICTH_1502 Holliday junction DNA helicase RuvB; TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: magnesium chelatase ChlI subunit; ATPase AAA; Holliday junction DNA helicase RuvB domain; ATPase associated with various cellular activities AAA_5; SMART: ATPase AAA YP_002353500.1 PFAM: RuvA domain protein; DNA recombination protein RuvA domain I; SMART: Helix-hairpin-helix DNA-binding class 1; KEGG: dth:DICTH_1503 Holliday junction DNA helicase RuvA YP_002353501.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity YP_002353502.1 PFAM: protein of unknown function DUF28; KEGG: dth:DICTH_1505 hypothetical protein YP_002353503.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: sucrose-6F-phosphate phosphohydrolase; haloacid dehalogenase type 3; KEGG: dth:DICTH_1507 phosphoglycolate phosphatase, putative YP_002353504.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: dth:DICTH_1506 hypothetical protein YP_002353505.1 PFAM: protein of unknown function DUF1312; KEGG: dth:DICTH_1508 hypothetical protein YP_002353506.1 PFAM: nitroreductase; KEGG: dth:DICTH_1509 nitroreductase YP_002353507.1 PFAM: sugar isomerase (SIS); KEGG: dth:DICTH_1510 glucosamine--fructose-6-phosphate aminotransferase (isomerizing) YP_002353508.1 PFAM: acid phosphatase/vanadium-dependent haloperoxidase related; KEGG: dth:DICTH_1511 integral membrane protein YP_002353509.1 PFAM: glycosyl transferase group 1; KEGG: dth:DICTH_1512 glycosyl transferase, group 1 family protein YP_002353510.1 KEGG: dth:DICTH_1513 hypothetical protein YP_002353511.1 PFAM: protein of unknown function DUF87; KEGG: dth:DICTH_1514 domain of unknown function protein YP_002353512.1 PFAM: metallophosphoesterase; KEGG: dth:DICTH_1515 nuclease SbcD, putative YP_002353513.1 PFAM: SMC domain protein; RepA / Rep KID repeat-containing protein; KEGG: dth:DICTH_1517 DNA double-strand break repair RAD50 ATPase, putative YP_002353514.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: nucleotidyl transferase; KEGG: dth:DICTH_1516 UTP-glucose-1-phosphate uridylyltransferase YP_002353515.1 KEGG: dth:DICTH_1518 hypothetical protein YP_002353516.1 in methanococcus jannaschii this protein catalyzes the condensation of alpha-ketoglutarate and acetyl-CoA to form trans-homoaconitate; functions in alphaketosuberate synthesis which is a precursor in coenzyme B and biotin synthesis YP_002353517.1 KEGG: dth:DICTH_1520 3-isopropylmalate dehydratase large subunit 2; TIGRFAM: homoaconitate hydratase family protein; 3-isopropylmalate dehydratase; PFAM: aconitate hydratase domain protein YP_002353518.1 TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; KEGG: dth:DICTH_1521 3-isopropylmalate dehydratase small subunit 2 YP_002353519.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: dth:DICTH_1523 iron containing alcohol dehydrogenase YP_002353520.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: dth:DICTH_1522 glucose-1-phosphate thymidylyltransferase YP_002353521.1 PFAM: methylenetetrahydrofolate reductase; KEGG: dth:DICTH_1524 methylenetetrahydrofolate reductase YP_002353522.1 KEGG: dth:DICTH_1525 hypothetical protein YP_002353523.1 PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: dth:DICTH_1526 FolD bifunctional protein YP_002353524.1 PFAM: formate-tetrahydrofolate ligase FTHFS; KEGG: dth:DICTH_1527 formate--tetrahydrofolate ligase YP_002353525.1 TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: dth:DICTH_1528 conserved hypotehical protein YP_002353526.1 PFAM: nitroreductase; KEGG: dth:DICTH_1530 bacterioferritin comigratory protein/NADH dehydrogenase YP_002353527.1 PFAM: xylose isomerase; KEGG: dth:DICTH_1532 AP endonuclease, family 2 YP_002353528.1 PFAM: prephenate dehydratase; Chorismate mutase; amino acid-binding ACT domain protein; KEGG: dth:DICTH_1531 P-protein YP_002353529.1 PFAM: inner-membrane translocator; KEGG: dth:DICTH_1533 ribose transport system permease protein RbsC YP_002353530.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: dth:DICTH_1534 sugar ABC transporter, periplasmic sugar-binding protein YP_002353531.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dth:DICTH_1535 ribose transport ATP-binding protein RbsA YP_002353532.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dth:DICTH_1536 oxidoreductase, short chain dehydrogenase/reductase family YP_002353533.1 KEGG: dth:DICTH_1537 hypothetical protein YP_002353534.1 PFAM: glycoside hydrolase family 10; KEGG: dth:DICTH_1538 glycosyl hydrolase family 10 YP_002353535.1 PFAM: GumN family protein; KEGG: dth:DICTH_1539 GumN protein YP_002353536.1 PFAM: MscS Mechanosensitive ion channel; KEGG: dth:DICTH_1540 transporter, small conductance mechanosensitive ion channel (MscS) family YP_002353537.1 PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; KEGG: dth:DICTH_1541 rubrerythrin YP_002353538.1 SMART: DOMON domain protein; KEGG: dth:DICTH_1542 dopamine beta hydroxylase-related protein, containing doMON domain YP_002353539.1 KEGG: dth:DICTH_1544 putative ABC-transporter TycD YP_002353540.1 PFAM: aryldialkylphosphatase; KEGG: dth:DICTH_1545 AhlA, putative YP_002353541.1 PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: dth:DICTH_1546 hypothetical protein YP_002353542.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: dth:DICTH_1548 thiamine biosynthesis protein ThiS YP_002353543.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate YP_002353544.1 in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center YP_002353545.1 catalyzes the adenylation of ThiS which is involved in the formation of 5-methyl-4-(beta-hydroxyethyl)thiazole phosphate YP_002353546.1 KEGG: dth:DICTH_1552 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase YP_002353547.1 PFAM: thiamine biosynthesis protein ThiC; KEGG: dth:DICTH_1553 ThiC family YP_002353548.1 PFAM: phosphomethylpyrimidine kinase type-1; KEGG: dth:DICTH_1554 phosphomethylpyrimidine kinase YP_002353549.1 KEGG: dth:DICTH_1555 lipoprotein, putative YP_002353550.1 PFAM: metallophosphoesterase; KEGG: dth:DICTH_1556 membrane-associated protein, putative YP_002353551.1 KEGG: dth:DICTH_1557 hypothetical protein YP_002353552.1 PFAM: inner-membrane translocator; KEGG: dth:DICTH_1558 ribose transport system permease protein RbsC YP_002353553.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dth:DICTH_1559 ribose transport ATP-binding protein RbsA YP_002353554.1 KEGG: dth:DICTH_1560 sugar ABC transporter substrate-binding protein YP_002353555.1 PFAM: proteinase inhibitor I4 serpin; KEGG: dth:DICTH_1561 leukocyte elastase inhibitor YP_002353556.1 PFAM: glycoside hydrolase clan GH-D; KEGG: dth:DICTH_1562 alpha-galactosidase AgaN YP_002353557.1 PFAM: thiamineS protein; KEGG: dth:DICTH_1563 ThiS family, putative YP_002353558.1 PFAM: PP-loop domain protein; KEGG: dth:DICTH_1565 Veg136 protein YP_002353559.1 SMART: Mov34/MPN/PAD-1 family protein; KEGG: dth:DICTH_1564 Mov34/MPN/PAD-1 family YP_002353560.1 PFAM: radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dth:DICTH_1566 metallo cofactor biosynthesis protein, putative YP_002353561.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: dth:DICTH_1568 alpha-amylase 3 YP_002353562.1 PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: dth:DICTH_1567 putative kinase YP_002353563.1 PFAM: glycoside hydrolase family 4; KEGG: dth:DICTH_1569 6-phospho-beta-glucosidase BglT YP_002353564.1 TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: dth:DICTH_1570 pyruvate synthase subunit beta YP_002353565.1 PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: dth:DICTH_1571 oxoglutarate--ferredoxin oxidoreductase , alpha subunit YP_002353566.1 PFAM: ROK family protein; KEGG: dth:DICTH_1572 xylose repressor YP_002353567.1 PFAM: periplasmic solute binding protein; KEGG: dth:DICTH_1573 cation ABC transporter, periplasmic cation-binding protein YP_002353568.1 PFAM: ABC transporter; SMART: ATPase AAA; KEGG: dth:DICTH_1574 high-affinity zinc uptake system ATP-binding protein ZnuC YP_002353569.1 PFAM: ABC transporter; KEGG: dth:DICTH_1575 manganese transport system membrane protein YP_002353570.1 PFAM: ROK family protein; KEGG: dth:DICTH_1576 transcriptional repressor of the xylose operon YP_002353571.1 PFAM: protein of unknown function DUF125 transmembrane; KEGG: dth:DICTH_1577 integral membrane protein YP_002353572.1 PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: dth:DICTH_1578 NADH:ubiquinone oxidoreductase, nadh-binding (51 kd) subunit YP_002353573.1 TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: dth:DICTH_1579 NADH-quinone oxidoreductase chain E YP_002353574.1 KEGG: dth:DICTH_1580 putative response regulator; TIGRFAM: metal dependent phophohydrolase; PFAM: extracellular solute-binding protein family 3; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_002353575.1 KEGG: dth:DICTH_1581 YpdC YP_002353576.1 PFAM: haloacid dehalogenase; KEGG: dth:DICTH_1582 haloacid dehalogenase domain protein YP_002353577.1 KEGG: dth:DICTH_1583 hypothetical protein YP_002353578.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: dth:DICTH_1584 D-3-phosphoglycerate dehydrogenase YP_002353579.1 KEGG: dth:DICTH_1585 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); Cysteinyl-tRNA synthetase class Ia YP_002353580.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; histidine kinase HAMP region domain protein; CHASE4 domain protein; KEGG: dth:DICTH_1586 GGDEF domain protein YP_002353581.1 PFAM: protein of unknown function DUF1232; KEGG: cac:CAC1011 hypothetical protein YP_002353582.1 PFAM: xylose isomerase; KEGG: dth:DICTH_1588 xylose isomerase, putative YP_002353583.1 PFAM: ATP-cone domain protein; KEGG: dth:DICTH_1589 ATP cone domain protein YP_002353584.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates YP_002353585.1 TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: radical SAM protein; KEGG: dth:DICTH_1592 anaerobic ribonucleoside-triphosphate reductase activating protein YP_002353586.1 PFAM: major facilitator superfamily MFS_1; KEGG: dth:DICTH_1591 major facilitator family transporter, putative YP_002353587.1 KEGG: dth:DICTH_1593 hypothetical protein YP_002353588.1 PFAM: Carbohydrate-binding CenC domain protein; KEGG: dth:DICTH_1594 endo-1,4-beta-xylanase A YP_002353589.1 PFAM: extracellular solute-binding protein family 5; KEGG: dth:DICTH_1595 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein YP_002353590.1 KEGG: dth:DICTH_1596 oligopeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_002353591.1 KEGG: dth:DICTH_1597 oligopeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_002353592.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_1598 oligopeptide ABC transporter, permease protein YP_002353593.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_1599 oligopeptide ABC transporter, permease protein YP_002353594.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: dth:DICTH_1600 transcriptional regulator YP_002353595.1 KEGG: dth:DICTH_1602 hypothetical protein YP_002353596.1 PFAM: radical SAM protein; KEGG: dth:DICTH_1601 heme biosynthesis protein, putative YP_002353597.1 KEGG: tye:THEYE_A0195 hypothetical protein YP_002353598.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: dth:DICTH_1603 cobalt/zinc/cadmium cation efflux pump protein YP_002353599.1 PFAM: uroporphyrinogen decarboxylase (URO-D); KEGG: dth:DICTH_1604 uroporphyrinogen decarboxylase (URO-D) superfamily YP_002353600.1 PFAM: glycoside hydrolase family 67; glycosyl hydrolase 67 C-teriminal domain protein; glycosyl hydrolase 67 middle domain protein; KEGG: dth:DICTH_1605 alpha-glucuronidase YP_002353601.1 PFAM: glycoside hydrolase family 10; Carbohydrate-binding CenC domain protein; Carbohydrate-binding family 9; KEGG: pmo:Pmob_0231 endo-1,4-beta-xylanase YP_002353602.1 PFAM: beta-lactamase domain protein; KEGG: dth:DICTH_1606 histidine kinase, putative YP_002353603.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dth:DICTH_1608 iron-sulfur cluster-binding protein YP_002353604.1 PFAM: Appr-1-p processing domain protein; KEGG: dth:DICTH_1609 hypothetical protein YP_002353605.1 KEGG: dth:DICTH_1610 oligopeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_002353606.1 KEGG: dth:DICTH_1611 oligopeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter; Oligopeptide/dipeptide ABC transporter domain protein; SMART: ATPase AAA YP_002353607.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_1612 oligopeptide ABC transporter, permease protein YP_002353608.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_1613 oligopeptide ABC transporter, permease protein YP_002353609.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: dth:DICTH_1614 xylosidase/arabinosidase YP_002353610.1 PFAM: extracellular solute-binding protein family 5; KEGG: dth:DICTH_1615 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein YP_002353611.1 PFAM: radical SAM protein; KEGG: dth:DICTH_1616 Fe-S oxidoreductase YP_002353612.1 KEGG: dth:DICTH_1618 hypothetical protein YP_002353613.1 PFAM: glycosyl transferase group 1; KEGG: dth:DICTH_1617 glycosyl transferase YP_002353614.1 KEGG: dth:DICTH_1619 hypothetical protein YP_002353615.1 PFAM: glycoside hydrolase family 43; KEGG: csc:Csac_1560 glycoside hydrolase family protein YP_002353616.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: trq:TRQ2_0659 binding-protein-dependent transport systems inner membrane component YP_002353617.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: trq:TRQ2_0660 binding-protein-dependent transport systems inner membrane component YP_002353618.1 PFAM: extracellular solute-binding protein family 1; KEGG: dth:DICTH_1629 bacterial extracellular solute-binding protein, putative YP_002353619.1 KEGG: dth:DICTH_1620 L-fucose isomerase related protein YP_002353620.1 PFAM: class II aldolase/adducin family protein; KEGG: dth:DICTH_1621 L-ribulose-5-phosphate 4-epimerase YP_002353621.1 PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: dth:DICTH_1622 alpha-N-arabinofuranosidase YP_002353622.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: dth:DICTH_1623 LacI family transcriptional regulator YP_002353623.1 KEGG: tpt:Tpet_0641 hypothetical protein YP_002353624.1 KEGG: bha:BH1878 hypothetical protein YP_002353625.1 PFAM: alpha-L-arabinofuranosidase domain protein; KEGG: tle:Tlet_1147 alpha-N-arabinofuranosidase YP_002353626.1 KEGG: trq:TRQ2_0657 hypothetical protein YP_002353627.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_1630 sugar ABC transporter, permease protein YP_002353628.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_1631 sugar ABC transporter, permease protein YP_002353629.1 PFAM: extracellular solute-binding protein family 1; KEGG: dth:DICTH_1632 trehalose/maltose binding protein, putative YP_002353630.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: dth:DICTH_1633 transcriptional regulator YP_002353631.1 TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: dth:DICTH_1634 (R)-2-hydroxyglutaryl-CoA dehydratase activator YP_002353632.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: dth:DICTH_1635 2-hydroxyglutaryl-CoA dehydratase, D-component subfamily YP_002353633.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: dth:DICTH_1636 2-hydroxyglutaryl-CoA dehydratase, D-component subfamily YP_002353634.1 TIGRFAM: L-ribulokinase; PFAM: carbohydrate kinase FGGY; KEGG: dth:DICTH_1637 L-ribulokinase YP_002353635.1 PFAM: glycoside hydrolase family 4; KEGG: dth:DICTH_1638 alpha-glucosidase YP_002353636.1 PFAM: hypothetical protein; KEGG: dth:DICTH_1639 transporter, auxin efflux carrier (AEC) family YP_002353637.1 PFAM: 3-dehydroquinate synthase; KEGG: dth:DICTH_1640 3-dehydroquinate synthase YP_002353638.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; periplasmic binding protein/LacI transcriptional regulator; KEGG: dth:DICTH_1641 response regulator YP_002353639.1 KEGG: dth:DICTH_1642 GGDEF domain; TIGRFAM: diguanylate cyclase; metal dependent phophohydrolase; PFAM: GGDEF domain containing protein; periplasmic binding protein/LacI transcriptional regulator; GAF domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_002353640.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: dth:DICTH_1643 NADH-dependent butanol dehydrogenase A YP_002353641.1 KEGG: dth:DICTH_1644 dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_002353642.1 PFAM: methionine synthase vitamin-B12 independent; Cobalamin-independent synthase MetE domain protein; KEGG: dth:DICTH_1645 probable methylcobalamin:homocysteine methyltransferase, putative YP_002353643.1 catalyzes the formation of methionine from methylcobalamin and homocysteine YP_002353644.1 PFAM: glycoside hydrolase family 38; glycosyl hydrolase 38 domain protein; glycoside hydrolase family 38 central region; KEGG: tma:TM1851 alpha-mannosidase, putative YP_002353645.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dth:DICTH_1650 GGDEF domain protein YP_002353646.1 PFAM: Threonyl/alanyl tRNA synthetase SAD; KEGG: dth:DICTH_1649 threonyl and alanyl tRNA synthetase second additional domain protein YP_002353647.1 PFAM: RNP-1 like RNA-binding protein; KEGG: dth:DICTH_1651 RNA-binding region RNP-1 YP_002353648.1 KEGG: dth:DICTH_1652 hypothetical protein YP_002353649.1 PFAM: major facilitator superfamily MFS_1; KEGG: dth:DICTH_1653 hypothetical protein YP_002353650.1 PFAM: SMC domain protein; ABC transporter; SMART: ATPase AAA; KEGG: dth:DICTH_1654 ABC transporter, ATP-binding protein YP_002353651.1 TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: dth:DICTH_1655 cobalt transport protein, putative YP_002353652.1 KEGG: dth:DICTH_1656 cobalamin biosynthesis protein YP_002353653.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: dth:DICTH_1657 CbiM YP_002353654.1 PFAM: CopG domain protein DNA-binding domain protein; NikR nickel binding; KEGG: dth:DICTH_1658 hypothetical protein YP_002353655.1 PFAM: thiamine biosynthesis protein; ExsB family protein; PP-loop domain protein; KEGG: dth:DICTH_1659 hypothetical protein YP_002353656.1 PFAM: beta-lactamase domain protein; KEGG: dth:DICTH_1660 nitric oxide reductase YP_002353657.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: dth:DICTH_1661 versicolorin reductase YP_002353658.1 TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: dth:DICTH_1662 C4-dicarboxylate transporter large subunit YP_002353659.1 PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: dth:DICTH_1663 putative C4-dicarboxylate transporter, small permease protein YP_002353660.1 PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: dth:DICTH_1664 putative C4-dicarboxylate transporter, periplasmic C4-dicarboxylate-binding protein YP_002353661.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: dth:DICTH_1665 D-3-phosphoglycerate dehydrogenase YP_002353662.1 PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: dth:DICTH_1666 transcriptional regulator YP_002353663.1 PFAM: xylose isomerase; KEGG: dth:DICTH_1667 hypothetical protein YP_002353664.1 KEGG: dth:DICTH_1668 hypothetical protein YP_002353665.1 KEGG: dth:DICTH_1669 hypothetical protein YP_002353666.1 PFAM: Protein of unknown function DUF128; Ribonuclease R winged-helix domain protein; KEGG: dth:DICTH_1671 hypothetical protein YP_002353667.1 TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: dth:DICTH_1670 argininosuccinate lyase YP_002353668.1 TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: phosphoribosylglycinamide synthetase; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; RimK domain protein ATP-grasp; KEGG: dth:DICTH_1672 carbamoyl-phosphate synthase, large subunit YP_002353669.1 TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain; KEGG: dth:DICTH_1673 carbamoyl-phosphate synthase, small subunit YP_002353670.1 TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class I and II; aminotransferase class-III; KEGG: dth:DICTH_1674 acetylornithine aminotransferase YP_002353671.1 KEGG: dth:DICTH_1675 arginine biosynthesis bifunctional protein ArgJ; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ YP_002353672.1 KEGG: dth:DICTH_1676 N-acetyl-gamma-glutamyl-phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region YP_002353673.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming YP_002353674.1 PFAM: Forkhead-associated protein; KEGG: dth:DICTH_1678 forkhead-associated protein YP_002353675.1 PFAM: protein of unknown function RIO1; tyrosine protein kinase; CHASE2 domain protein; Serine/threonine protein kinase-related; SMART: serine/threonine protein kinase; KEGG: dth:DICTH_1679 putative protein kinase YP_002353676.1 TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: dth:DICTH_1680 ornithine carbamoyltransferase YP_002353677.1 PFAM: major facilitator superfamily MFS_1; KEGG: dth:DICTH_1681 transporter, major facilitator family YP_002353678.1 PFAM: hypothetical protein; KEGG: dth:DICTH_1682 transporter, auxin efflux carrier (AEC) family YP_002353679.1 PFAM: Citrate transporter; protein of unknown function DUF401; KEGG: dth:DICTH_1683 hypothetical protein YP_002353680.1 PFAM: metallophosphoesterase; 5'-Nucleotidase domain protein; KEGG: dth:DICTH_1684 nucleotidase YP_002353681.1 KEGG: dth:DICTH_1685 hypothetical protein YP_002353682.1 KEGG: dth:DICTH_1686 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta YP_002353683.1 PFAM: Septum formation initiator; KEGG: dth:DICTH_1687 septum formation initiator subfamily, putative YP_002353684.1 PFAM: helix-hairpin-helix motif; radical SAM protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: dth:DICTH_1688 radical SAM YP_002353685.1 KEGG: dth:DICTH_1689 beta-glucosidase A; TIGRFAM: beta-galactosidase; PFAM: glycoside hydrolase family 1 YP_002353686.1 PFAM: glycosidase PH1107-related; KEGG: dth:DICTH_1691 hypothetical protein YP_002353687.1 PFAM: peptidase zinc-dependent; KEGG: dth:DICTH_1693 hypothetical protein YP_002353688.1 PFAM: glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 sugar binding; KEGG: dth:DICTH_1692 beta-mannosidase YP_002353689.1 KEGG: dth:DICTH_1694 hypothetical protein YP_002353690.1 KEGG: dth:DICTH_1695 glycogen phosphorylase; TIGRFAM: alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35 YP_002353691.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tle:Tlet_1040 binding-protein-dependent transport systems inner membrane component YP_002353692.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rrs:RoseRS_0802 binding-protein-dependent transport systems inner membrane component YP_002353693.1 PFAM: extracellular solute-binding protein family 1; KEGG: tle:Tlet_1038 extracellular solute-binding protein family 1 YP_002353694.1 PFAM: ROK family protein; KEGG: dth:DICTH_1696 transcriptional regulator, XylR-related YP_002353695.1 KEGG: dth:DICTH_1697 hypothetical protein YP_002353696.1 PFAM: aldo/keto reductase; KEGG: dth:DICTH_1698 K+ channel beta subunit YP_002353697.1 PFAM: protein of unknown function DUF814; fibronectin-binding A domain protein; KEGG: dth:DICTH_1700 fibronectin-binding protein YP_002353698.1 KEGG: dth:DICTH_1699 pseudouridylate synthase, 23S RNA-specific; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase YP_002353699.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: dth:DICTH_1701 cyclic nucleotide-binding:bacterial regulatory protein, Crp