-- dump date 20240506_042317 -- class Genbank::CDS -- table cds_go_process -- id GO_process COCCU_RS00005 GO:0006275 - regulation of DNA replication [Evidence IEA] COCCU_RS00010 GO:0006260 - DNA replication [Evidence IEA] COCCU_RS00015 GO:0006281 - DNA repair [Evidence IEA] COCCU_RS00025 GO:0006265 - DNA topological change [Evidence IEA] COCCU_RS00055 GO:0006259 - DNA metabolic process [Evidence IEA] COCCU_RS00055 GO:0006265 - DNA topological change [Evidence IEA] COCCU_RS00075 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS00095 GO:0046677 - response to antibiotic [Evidence IEA] COCCU_RS00120 GO:0006555 - methionine metabolic process [Evidence IEA] COCCU_RS00125 GO:0008652 - amino acid biosynthetic process [Evidence IEA] COCCU_RS00125 GO:0009086 - methionine biosynthetic process [Evidence IEA] COCCU_RS00130 GO:0000413 - protein peptidyl-prolyl isomerization [Evidence IEA] COCCU_RS00130 GO:0006457 - protein folding [Evidence IEA] COCCU_RS00175 GO:0000160 - phosphorelay signal transduction system [Evidence IEA] COCCU_RS00175 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS00195 GO:0009712 - catechol-containing compound metabolic process [Evidence IEA] COCCU_RS00220 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS00235 GO:0006468 - protein phosphorylation [Evidence IEA] COCCU_RS00240 GO:0006468 - protein phosphorylation [Evidence IEA] COCCU_RS00250 GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA] COCCU_RS00250 GO:0051301 - cell division [Evidence IEA] COCCU_RS00375 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS00395 GO:0006725 - cellular aromatic compound metabolic process [Evidence IEA] COCCU_RS00490 GO:0006826 - iron ion transport [Evidence IEA] COCCU_RS00515 GO:0009102 - biotin biosynthetic process [Evidence IEA] COCCU_RS00530 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS00535 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS00540 GO:0019287 - isopentenyl diphosphate biosynthetic process, mevalonate pathway [Evidence IEA] COCCU_RS00565 GO:0042398 - cellular modified amino acid biosynthetic process [Evidence IEA] COCCU_RS00575 GO:0006725 - cellular aromatic compound metabolic process [Evidence IEA] COCCU_RS00585 GO:0009116 - nucleoside metabolic process [Evidence IEA] COCCU_RS00590 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS00640 GO:0015833 - peptide transport [Evidence IEA] COCCU_RS00650 GO:0006520 - amino acid metabolic process [Evidence IEA] COCCU_RS00665 GO:0046033 - AMP metabolic process [Evidence IEA] COCCU_RS00670 GO:0009443 - pyridoxal 5'-phosphate salvage [Evidence IEA] COCCU_RS00685 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS00715 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS00730 GO:0019516 - lactate oxidation [Evidence IEA] COCCU_RS00800 GO:0015940 - pantothenate biosynthetic process [Evidence IEA] COCCU_RS00805 GO:0015940 - pantothenate biosynthetic process [Evidence IEA] COCCU_RS00810 GO:0006284 - base-excision repair [Evidence IEA] COCCU_RS00815 GO:0008152 - metabolic process [Evidence IEA] COCCU_RS00825 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS00830 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS00855 GO:0051049 - regulation of transport [Evidence IEA] COCCU_RS00860 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS00865 GO:0010468 - regulation of gene expression [Evidence IEA] COCCU_RS00875 GO:0007165 - signal transduction [Evidence IEA] COCCU_RS00880 GO:0000160 - phosphorelay signal transduction system [Evidence IEA] COCCU_RS00905 GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA] COCCU_RS00950 GO:0006281 - DNA repair [Evidence IEA] COCCU_RS01015 GO:0042952 - beta-ketoadipate pathway [Evidence IEA] COCCU_RS01020 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS01065 GO:0006508 - proteolysis [Evidence IEA] COCCU_RS01095 GO:0006537 - glutamate biosynthetic process [Evidence IEA] COCCU_RS01095 GO:0006807 - nitrogen compound metabolic process [Evidence IEA] COCCU_RS01110 GO:0006812 - monoatomic cation transport [Evidence IEA] COCCU_RS01120 GO:0071766 - Actinobacterium-type cell wall biogenesis [Evidence IEA] COCCU_RS01245 GO:0000105 - histidine biosynthetic process [Evidence IEA] COCCU_RS01260 GO:0006820 - monoatomic anion transport [Evidence IEA] COCCU_RS01270 GO:0006571 - tyrosine biosynthetic process [Evidence IEA] COCCU_RS01305 GO:0006400 - tRNA modification [Evidence IEA] COCCU_RS01315 GO:0009225 - nucleotide-sugar metabolic process [Evidence IEA] COCCU_RS01320 GO:0006810 - transport [Evidence IEA] COCCU_RS01330 GO:1990397 - queuosine salvage [Evidence IEA] COCCU_RS01335 GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA] COCCU_RS01360 GO:0009058 - biosynthetic process [Evidence IEA] COCCU_RS01375 GO:0008150 - biological_process [Evidence IEA] COCCU_RS01380 GO:0006281 - DNA repair [Evidence IEA] COCCU_RS01380 GO:0006310 - DNA recombination [Evidence IEA] COCCU_RS01425 GO:0009098 - leucine biosynthetic process [Evidence IEA] COCCU_RS01445 GO:0008652 - amino acid biosynthetic process [Evidence IEA] COCCU_RS01450 GO:0008652 - amino acid biosynthetic process [Evidence IEA] COCCU_RS01550 GO:0006281 - DNA repair [Evidence IEA] COCCU_RS01560 GO:0006281 - DNA repair [Evidence IEA] COCCU_RS01560 GO:0009132 - nucleoside diphosphate metabolic process [Evidence IEA] COCCU_RS01560 GO:0015938 - coenzyme A catabolic process [Evidence IEA] COCCU_RS01565 GO:0006508 - proteolysis [Evidence IEA] COCCU_RS01585 GO:0016311 - dephosphorylation [Evidence IEA] COCCU_RS01640 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS01645 GO:0006260 - DNA replication [Evidence IEA] COCCU_RS01645 GO:0006265 - DNA topological change [Evidence IEA] COCCU_RS01650 GO:0006633 - fatty acid biosynthetic process [Evidence IEA] COCCU_RS01660 GO:1905887 - autoinducer AI-2 transmembrane transport [Evidence IEA] COCCU_RS01680 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS01690 GO:0007165 - signal transduction [Evidence IEA] COCCU_RS01695 GO:0006260 - DNA replication [Evidence IEA] COCCU_RS01705 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS01705 GO:0006979 - response to oxidative stress [Evidence IEA] COCCU_RS01720 GO:0005975 - carbohydrate metabolic process [Evidence IEA] COCCU_RS01725 GO:0010127 - mycothiol-dependent detoxification [Evidence IEA] COCCU_RS01735 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS01770 GO:0006508 - proteolysis [Evidence IEA] COCCU_RS01780 GO:0006096 - glycolytic process [Evidence IEA] COCCU_RS01780 GO:0045454 - cell redox homeostasis [Evidence IEA] COCCU_RS01780 GO:0051068 - dihydrolipoamide metabolic process [Evidence IEA] COCCU_RS01855 GO:0010125 - mycothiol biosynthetic process [Evidence IEA] COCCU_RS01860 GO:0006096 - glycolytic process [Evidence IEA] COCCU_RS01870 GO:0000160 - phosphorelay signal transduction system [Evidence IEA] COCCU_RS01870 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS01895 GO:0006561 - proline biosynthetic process [Evidence IEA] COCCU_RS01925 GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA] COCCU_RS01935 GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA] COCCU_RS01940 GO:0033014 - tetrapyrrole biosynthetic process [Evidence IEA] COCCU_RS01960 GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA] COCCU_RS01965 GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA] COCCU_RS01970 GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA] COCCU_RS01990 GO:0017004 - cytochrome complex assembly [Evidence IEA] COCCU_RS01995 GO:0017004 - cytochrome complex assembly [Evidence IEA] COCCU_RS02015 GO:0009243 - O antigen biosynthetic process [Evidence IEA] COCCU_RS02015 GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA] COCCU_RS02020 GO:0009243 - O antigen biosynthetic process [Evidence IEA] COCCU_RS02020 GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA] COCCU_RS02025 GO:0009243 - O antigen biosynthetic process [Evidence IEA] COCCU_RS02025 GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA] COCCU_RS02040 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS02045 GO:0009234 - menaquinone biosynthetic process [Evidence IEA] COCCU_RS02085 GO:0006817 - phosphate ion transport [Evidence IEA] COCCU_RS02085 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS02090 GO:0009234 - menaquinone biosynthetic process [Evidence IEA] COCCU_RS02100 GO:0006508 - proteolysis [Evidence IEA] COCCU_RS02110 GO:0009234 - menaquinone biosynthetic process [Evidence IEA] COCCU_RS02135 GO:0008299 - isoprenoid biosynthetic process [Evidence IEA] COCCU_RS02170 GO:0006353 - DNA-templated transcription termination [Evidence IEA] COCCU_RS02175 GO:0006412 - translation [Evidence IEA] COCCU_RS02180 GO:0006412 - translation [Evidence IEA] COCCU_RS02200 GO:0006412 - translation [Evidence IEA] COCCU_RS02205 GO:0006412 - translation [Evidence IEA] COCCU_RS02215 GO:0006351 - DNA-templated transcription [Evidence IEA] COCCU_RS02220 GO:0006351 - DNA-templated transcription [Evidence IEA] COCCU_RS02230 GO:0006412 - translation [Evidence IEA] COCCU_RS02235 GO:0006412 - translation [Evidence IEA] COCCU_RS02240 GO:0006414 - translational elongation [Evidence IEA] COCCU_RS02245 GO:0006414 - translational elongation [Evidence IEA] COCCU_RS02255 GO:0006412 - translation [Evidence IEA] COCCU_RS02260 GO:0006412 - translation [Evidence IEA] COCCU_RS02265 GO:0006412 - translation [Evidence IEA] COCCU_RS02270 GO:0006412 - translation [Evidence IEA] COCCU_RS02275 GO:0006412 - translation [Evidence IEA] COCCU_RS02280 GO:0006412 - translation [Evidence IEA] COCCU_RS02285 GO:0006412 - translation [Evidence IEA] COCCU_RS02290 GO:0006412 - translation [Evidence IEA] COCCU_RS02295 GO:0006412 - translation [Evidence IEA] COCCU_RS02300 GO:0006412 - translation [Evidence IEA] COCCU_RS02305 GO:0006412 - translation [Evidence IEA] COCCU_RS02325 GO:0009234 - menaquinone biosynthetic process [Evidence IEA] COCCU_RS02340 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS02345 GO:0006412 - translation [Evidence IEA] COCCU_RS02350 GO:0006412 - translation [Evidence IEA] COCCU_RS02355 GO:0006412 - translation [Evidence IEA] COCCU_RS02370 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS02375 GO:0071705 - nitrogen compound transport [Evidence IEA] COCCU_RS02380 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS02410 GO:0006412 - translation [Evidence IEA] COCCU_RS02415 GO:0006412 - translation [Evidence IEA] COCCU_RS02420 GO:0006412 - translation [Evidence IEA] COCCU_RS02425 GO:0006412 - translation [Evidence IEA] COCCU_RS02430 GO:0006412 - translation [Evidence IEA] COCCU_RS02435 GO:0006412 - translation [Evidence IEA] COCCU_RS02445 GO:0043952 - protein transport by the Sec complex [Evidence IEA] COCCU_RS02450 GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA] COCCU_RS02455 GO:0036211 - protein modification process [Evidence IEA] COCCU_RS02465 GO:0006413 - translational initiation [Evidence IEA] COCCU_RS02470 GO:0006412 - translation [Evidence IEA] COCCU_RS02475 GO:0006412 - translation [Evidence IEA] COCCU_RS02480 GO:0006412 - translation [Evidence IEA] COCCU_RS02485 GO:0006351 - DNA-templated transcription [Evidence IEA] COCCU_RS02490 GO:0006412 - translation [Evidence IEA] COCCU_RS02500 GO:0006400 - tRNA modification [Evidence IEA] COCCU_RS02510 GO:0009306 - protein secretion [Evidence IEA] COCCU_RS02525 GO:0008150 - biological_process [Evidence IEA] COCCU_RS02530 GO:0009306 - protein secretion [Evidence IEA] COCCU_RS02535 GO:0009306 - protein secretion [Evidence IEA] COCCU_RS02540 GO:0009306 - protein secretion [Evidence IEA] COCCU_RS02545 GO:0009306 - protein secretion [Evidence IEA] COCCU_RS02560 GO:0006412 - translation [Evidence IEA] COCCU_RS02565 GO:0006412 - translation [Evidence IEA] COCCU_RS02570 GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA] COCCU_RS02570 GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA] COCCU_RS02595 GO:0006040 - amino sugar metabolic process [Evidence IEA] COCCU_RS02595 GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA] COCCU_RS02610 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS02620 GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA] COCCU_RS02625 GO:0006400 - tRNA modification [Evidence IEA] COCCU_RS02640 GO:0006400 - tRNA modification [Evidence IEA] COCCU_RS02645 GO:0036211 - protein modification process [Evidence IEA] COCCU_RS02645 GO:0042254 - ribosome biogenesis [Evidence IEA] COCCU_RS02650 GO:0006400 - tRNA modification [Evidence IEA] COCCU_RS02660 GO:0006833 - water transport [Evidence IEA] COCCU_RS02665 GO:0008152 - metabolic process [Evidence IEA] COCCU_RS02670 GO:0006457 - protein folding [Evidence IEA] COCCU_RS02675 GO:0006457 - protein folding [Evidence IEA] COCCU_RS02700 GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA] COCCU_RS02710 GO:0006177 - GMP biosynthetic process [Evidence IEA] COCCU_RS02740 GO:0000160 - phosphorelay signal transduction system [Evidence IEA] COCCU_RS02740 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS02745 GO:0008152 - metabolic process [Evidence IEA] COCCU_RS02765 GO:0048473 - D-methionine transport [Evidence IEA] COCCU_RS02770 GO:0048473 - D-methionine transport [Evidence IEA] COCCU_RS02785 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS02835 GO:0009058 - biosynthetic process [Evidence IEA] COCCU_RS02845 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS02855 GO:0006826 - iron ion transport [Evidence IEA] COCCU_RS02860 GO:0015891 - siderophore transport [Evidence IEA] COCCU_RS02865 GO:0006099 - tricarboxylic acid cycle [Evidence IEA] COCCU_RS02870 GO:0055072 - obsolete iron ion homeostasis [Evidence IEA] COCCU_RS02875 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS02905 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS02910 GO:0006436 - tryptophanyl-tRNA aminoacylation [Evidence IEA] COCCU_RS14610 GO:0006508 - proteolysis [Evidence IEA] COCCU_RS02945 GO:0009116 - nucleoside metabolic process [Evidence IEA] COCCU_RS02960 GO:0045454 - cell redox homeostasis [Evidence IEA] COCCU_RS02985 GO:0019629 - propionate catabolic process, 2-methylcitrate cycle [Evidence IEA] COCCU_RS02995 GO:0006090 - pyruvate metabolic process [Evidence IEA] COCCU_RS02995 GO:0006094 - gluconeogenesis [Evidence IEA] COCCU_RS03055 GO:0009117 - nucleotide metabolic process [Evidence IEA] COCCU_RS03075 GO:0036211 - protein modification process [Evidence IEA] COCCU_RS03085 GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA] COCCU_RS03105 GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA] COCCU_RS03135 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS03165 GO:0008643 - carbohydrate transport [Evidence IEA] COCCU_RS03165 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS03190 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS03205 GO:0006801 - superoxide metabolic process [Evidence IEA] COCCU_RS03270 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS03285 GO:0070726 - cell wall assembly [Evidence IEA] COCCU_RS03290 GO:0009243 - O antigen biosynthetic process [Evidence IEA] COCCU_RS03290 GO:0019305 - dTDP-rhamnose biosynthetic process [Evidence IEA] COCCU_RS03320 GO:0005975 - carbohydrate metabolic process [Evidence IEA] COCCU_RS03330 GO:0005975 - carbohydrate metabolic process [Evidence IEA] COCCU_RS03345 GO:0006730 - one-carbon metabolic process [Evidence IEA] COCCU_RS03350 GO:0006233 - dTDP biosynthetic process [Evidence IEA] COCCU_RS03355 GO:0000160 - phosphorelay signal transduction system [Evidence IEA] COCCU_RS03360 GO:0007165 - signal transduction [Evidence IEA] COCCU_RS03375 GO:0009386 - translational attenuation [Evidence IEA] COCCU_RS03380 GO:0006605 - protein targeting [Evidence IEA] COCCU_RS03380 GO:0006886 - intracellular protein transport [Evidence IEA] COCCU_RS03380 GO:0017038 - protein import [Evidence IEA] COCCU_RS03410 GO:0006633 - fatty acid biosynthetic process [Evidence IEA] COCCU_RS03415 GO:0006821 - chloride transport [Evidence IEA] COCCU_RS03415 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS03420 GO:0006412 - translation [Evidence IEA] COCCU_RS03425 GO:0009423 - chorismate biosynthetic process [Evidence IEA] COCCU_RS03430 GO:0009432 - SOS response [Evidence IEA] COCCU_RS03430 GO:0018142 - protein-DNA covalent cross-linking [Evidence IEA] COCCU_RS03435 GO:0043039 - tRNA aminoacylation [Evidence IEA] COCCU_RS03440 GO:0006352 - DNA-templated transcription initiation [Evidence IEA] COCCU_RS03440 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS03445 GO:0045454 - cell redox homeostasis [Evidence IEA] COCCU_RS03560 GO:0071705 - nitrogen compound transport [Evidence IEA] COCCU_RS03570 GO:0000105 - histidine biosynthetic process [Evidence IEA] COCCU_RS03585 GO:0000910 - cytokinesis [Evidence IEA] COCCU_RS03645 GO:0009058 - biosynthetic process [Evidence IEA] COCCU_RS03685 GO:0017186 - peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase [Evidence IEA] COCCU_RS03705 GO:0001510 - RNA methylation [Evidence IEA] COCCU_RS03715 GO:0051301 - cell division [Evidence IEA] COCCU_RS03720 GO:0006564 - L-serine biosynthetic process [Evidence IEA] COCCU_RS03760 GO:0006310 - DNA recombination [Evidence IEA] COCCU_RS03760 GO:0015074 - DNA integration [Evidence IEA] COCCU_RS03845 GO:0006231 - dTMP biosynthetic process [Evidence IEA] COCCU_RS03850 GO:0006790 - sulfur compound metabolic process [Evidence IEA] COCCU_RS03860 GO:0006284 - base-excision repair [Evidence IEA] COCCU_RS03870 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS03885 GO:0042398 - cellular modified amino acid biosynthetic process [Evidence IEA] COCCU_RS03890 GO:0006094 - gluconeogenesis [Evidence IEA] COCCU_RS03890 GO:0006096 - glycolytic process [Evidence IEA] COCCU_RS03895 GO:0046417 - chorismate metabolic process [Evidence IEA] COCCU_RS03900 GO:0006268 - DNA unwinding involved in DNA replication [Evidence IEA] COCCU_RS03900 GO:0006281 - DNA repair [Evidence IEA] COCCU_RS03925 GO:0006508 - proteolysis [Evidence IEA] COCCU_RS03935 GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA] COCCU_RS03940 GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA] COCCU_RS03940 GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA] COCCU_RS03980 GO:0006304 - DNA modification [Evidence IEA] COCCU_RS03990 GO:0006304 - DNA modification [Evidence IEA] COCCU_RS14620 GO:0006313 - DNA transposition [Evidence IEA] COCCU_RS04005 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS04015 GO:0006412 - translation [Evidence IEA] COCCU_RS04020 GO:0006412 - translation [Evidence IEA] COCCU_RS04025 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS04035 GO:0006412 - translation [Evidence IEA] COCCU_RS04040 GO:0006412 - translation [Evidence IEA] COCCU_RS04045 GO:0006412 - translation [Evidence IEA] COCCU_RS04050 GO:0006412 - translation [Evidence IEA] COCCU_RS04055 GO:0000160 - phosphorelay signal transduction system [Evidence IEA] COCCU_RS04055 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS04060 GO:0007165 - signal transduction [Evidence IEA] COCCU_RS04080 GO:0006810 - transport [Evidence IEA] COCCU_RS04090 GO:0006730 - one-carbon metabolic process [Evidence IEA] COCCU_RS04095 GO:0009225 - nucleotide-sugar metabolic process [Evidence IEA] COCCU_RS04100 GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA] COCCU_RS04115 GO:0006284 - base-excision repair [Evidence IEA] COCCU_RS04135 GO:0006493 - protein O-linked glycosylation [Evidence IEA] COCCU_RS04140 GO:0000451 - rRNA 2'-O-methylation [Evidence IEA] COCCU_RS04145 GO:0071705 - nitrogen compound transport [Evidence IEA] COCCU_RS04150 GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA] COCCU_RS04180 GO:0016114 - terpenoid biosynthetic process [Evidence IEA] COCCU_RS04185 GO:0051049 - regulation of transport [Evidence IEA] COCCU_RS04215 GO:0006793 - phosphorus metabolic process [Evidence IEA] COCCU_RS04235 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS04285 GO:0006415 - translational termination [Evidence IEA] COCCU_RS04290 GO:0006147 - guanine catabolic process [Evidence IEA] COCCU_RS04300 GO:0006412 - translation [Evidence IEA] COCCU_RS04310 GO:0006006 - glucose metabolic process [Evidence IEA] COCCU_RS04350 GO:0006412 - translation [Evidence IEA] COCCU_RS04360 GO:0006412 - translation [Evidence IEA] COCCU_RS04380 GO:0006725 - cellular aromatic compound metabolic process [Evidence IEA] COCCU_RS04400 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS04435 GO:0006725 - cellular aromatic compound metabolic process [Evidence IEA] COCCU_RS04435 GO:0019439 - aromatic compound catabolic process [Evidence IEA] COCCU_RS04470 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS04475 GO:0044249 - cellular biosynthetic process [Evidence IEA] COCCU_RS04480 GO:0000902 - cell morphogenesis [Evidence IEA] COCCU_RS04480 GO:0006048 - UDP-N-acetylglucosamine biosynthetic process [Evidence IEA] COCCU_RS04480 GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA] COCCU_RS04505 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS04510 GO:0006281 - DNA repair [Evidence IEA] COCCU_RS04540 GO:0006096 - glycolytic process [Evidence IEA] COCCU_RS04545 GO:0051301 - cell division [Evidence IEA] COCCU_RS04565 GO:0006396 - RNA processing [Evidence IEA] COCCU_RS04590 GO:0032784 - regulation of DNA-templated transcription elongation [Evidence IEA] COCCU_RS04600 GO:0010126 - mycothiol metabolic process [Evidence IEA] COCCU_RS04610 GO:0009423 - chorismate biosynthetic process [Evidence IEA] COCCU_RS04620 GO:0015937 - coenzyme A biosynthetic process [Evidence IEA] COCCU_RS04625 GO:0019264 - glycine biosynthetic process from serine [Evidence IEA] COCCU_RS04660 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS04675 GO:0006099 - tricarboxylic acid cycle [Evidence IEA] COCCU_RS04675 GO:0006106 - fumarate metabolic process [Evidence IEA] COCCU_RS04675 GO:0006108 - malate metabolic process [Evidence IEA] COCCU_RS04680 GO:0006094 - gluconeogenesis [Evidence IEA] COCCU_RS04690 GO:0015727 - lactate transport [Evidence IEA] COCCU_RS04695 GO:0006308 - DNA catabolic process [Evidence IEA] COCCU_RS04700 GO:0006308 - DNA catabolic process [Evidence IEA] COCCU_RS04705 GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA] COCCU_RS04720 GO:1905887 - autoinducer AI-2 transmembrane transport [Evidence IEA] COCCU_RS04755 GO:0008150 - biological_process [Evidence IEA] COCCU_RS04910 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS04930 GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA] COCCU_RS04985 GO:0008152 - metabolic process [Evidence IEA] COCCU_RS05000 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS05125 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS05145 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS05160 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS05180 GO:0006412 - translation [Evidence IEA] COCCU_RS05180 GO:0006950 - response to stress [Evidence IEA] COCCU_RS05190 GO:0010125 - mycothiol biosynthetic process [Evidence IEA] COCCU_RS05205 GO:0009058 - biosynthetic process [Evidence IEA] COCCU_RS05235 GO:0006865 - amino acid transport [Evidence IEA] COCCU_RS05235 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS05245 GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA] COCCU_RS05255 GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA] COCCU_RS05290 GO:0005978 - glycogen biosynthetic process [Evidence IEA] COCCU_RS05300 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS05340 GO:0006099 - tricarboxylic acid cycle [Evidence IEA] COCCU_RS05380 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS05385 GO:0006855 - xenobiotic transmembrane transport [Evidence IEA] COCCU_RS05385 GO:0009410 - response to xenobiotic stimulus [Evidence IEA] COCCU_RS05425 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS05430 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS05470 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS05480 GO:0006865 - amino acid transport [Evidence IEA] COCCU_RS05480 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS05500 GO:0015824 - proline transport [Evidence IEA] COCCU_RS05530 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS05535 GO:0080135 - regulation of cellular response to stress [Evidence IEA] COCCU_RS05550 GO:0006420 - arginyl-tRNA aminoacylation [Evidence IEA] COCCU_RS05555 GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA] COCCU_RS05565 GO:0000160 - phosphorelay signal transduction system [Evidence IEA] COCCU_RS05565 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS05575 GO:0000160 - phosphorelay signal transduction system [Evidence IEA] COCCU_RS05575 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS05585 GO:0006520 - amino acid metabolic process [Evidence IEA] COCCU_RS05590 GO:0009088 - threonine biosynthetic process [Evidence IEA] COCCU_RS05605 GO:0015689 - molybdate ion transport [Evidence IEA] COCCU_RS05610 GO:0019645 - anaerobic electron transport chain [Evidence IEA] COCCU_RS05615 GO:0051131 - chaperone-mediated protein complex assembly [Evidence IEA] COCCU_RS05620 GO:0009061 - anaerobic respiration [Evidence IEA] COCCU_RS05625 GO:0009061 - anaerobic respiration [Evidence IEA] COCCU_RS05630 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS05645 GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA] COCCU_RS05650 GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA] COCCU_RS05655 GO:0006777 - Mo-molybdopterin cofactor biosynthetic process [Evidence IEA] COCCU_RS05665 GO:0006353 - DNA-templated transcription termination [Evidence IEA] COCCU_RS05670 GO:0006415 - translational termination [Evidence IEA] COCCU_RS05675 GO:0006412 - translation [Evidence IEA] COCCU_RS05675 GO:0018364 - peptidyl-glutamine methylation [Evidence IEA] COCCU_RS05680 GO:0006400 - tRNA modification [Evidence IEA] COCCU_RS05695 GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA] COCCU_RS05705 GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA] COCCU_RS05710 GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA] COCCU_RS05715 GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA] COCCU_RS05720 GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA] COCCU_RS05725 GO:0015986 - proton motive force-driven ATP synthesis [Evidence IEA] COCCU_RS05765 GO:0005975 - carbohydrate metabolic process [Evidence IEA] COCCU_RS05765 GO:0005978 - glycogen biosynthetic process [Evidence IEA] COCCU_RS05825 GO:0009307 - DNA restriction-modification system [Evidence IEA] COCCU_RS05855 GO:0008033 - tRNA processing [Evidence IEA] COCCU_RS05895 GO:0006260 - DNA replication [Evidence IEA] COCCU_RS05895 GO:0006281 - DNA repair [Evidence IEA] COCCU_RS05905 GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA] COCCU_RS05910 GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA] COCCU_RS05920 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS05965 GO:0006855 - xenobiotic transmembrane transport [Evidence IEA] COCCU_RS05965 GO:0009410 - response to xenobiotic stimulus [Evidence IEA] COCCU_RS05995 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS06020 GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA] COCCU_RS06030 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS06035 GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA] COCCU_RS06040 GO:0009082 - branched-chain amino acid biosynthetic process [Evidence IEA] COCCU_RS06050 GO:0006310 - DNA recombination [Evidence IEA] COCCU_RS06050 GO:0015074 - DNA integration [Evidence IEA] COCCU_RS06110 GO:0006564 - L-serine biosynthetic process [Evidence IEA] COCCU_RS06120 GO:0009098 - leucine biosynthetic process [Evidence IEA] COCCU_RS06165 GO:0009234 - menaquinone biosynthetic process [Evidence IEA] COCCU_RS06175 GO:0006424 - glutamyl-tRNA aminoacylation [Evidence IEA] COCCU_RS06240 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS06245 GO:0009098 - leucine biosynthetic process [Evidence IEA] COCCU_RS06250 GO:0009098 - leucine biosynthetic process [Evidence IEA] COCCU_RS06280 GO:0046167 - glycerol-3-phosphate biosynthetic process [Evidence IEA] COCCU_RS06285 GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA] COCCU_RS06295 GO:0009228 - thiamine biosynthetic process [Evidence IEA] COCCU_RS06310 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS06325 GO:0006284 - base-excision repair [Evidence IEA] COCCU_RS06345 GO:0031167 - rRNA methylation [Evidence IEA] COCCU_RS06350 GO:0015937 - coenzyme A biosynthetic process [Evidence IEA] COCCU_RS06365 GO:0006865 - amino acid transport [Evidence IEA] COCCU_RS06400 GO:0006261 - DNA-templated DNA replication [Evidence IEA] COCCU_RS06425 GO:0015937 - coenzyme A biosynthetic process [Evidence IEA] COCCU_RS06470 GO:0006289 - nucleotide-excision repair [Evidence IEA] COCCU_RS06510 GO:0006289 - nucleotide-excision repair [Evidence IEA] COCCU_RS06515 GO:0006812 - monoatomic cation transport [Evidence IEA] COCCU_RS06530 GO:0006413 - translational initiation [Evidence IEA] COCCU_RS06535 GO:0006412 - translation [Evidence IEA] COCCU_RS06540 GO:0006412 - translation [Evidence IEA] COCCU_RS06575 GO:0001510 - RNA methylation [Evidence IEA] COCCU_RS06580 GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA] COCCU_RS06585 GO:0006432 - phenylalanyl-tRNA aminoacylation [Evidence IEA] COCCU_RS06590 GO:0045226 - extracellular polysaccharide biosynthetic process [Evidence IEA] COCCU_RS06600 GO:0000271 - polysaccharide biosynthetic process [Evidence IEA] COCCU_RS06610 GO:0006486 - protein glycosylation [Evidence IEA] COCCU_RS06640 GO:0006592 - ornithine biosynthetic process [Evidence IEA] COCCU_RS06645 GO:0006526 - arginine biosynthetic process [Evidence IEA] COCCU_RS06650 GO:0006592 - ornithine biosynthetic process [Evidence IEA] COCCU_RS06655 GO:0006525 - arginine metabolic process [Evidence IEA] COCCU_RS06660 GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA] COCCU_RS06665 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS06665 GO:0006525 - arginine metabolic process [Evidence IEA] COCCU_RS06670 GO:0006526 - arginine biosynthetic process [Evidence IEA] COCCU_RS06675 GO:0042450 - arginine biosynthetic process via ornithine [Evidence IEA] COCCU_RS06690 GO:0006437 - tyrosyl-tRNA aminoacylation [Evidence IEA] COCCU_RS06715 GO:0008152 - metabolic process [Evidence IEA] COCCU_RS06720 GO:0032259 - methylation [Evidence IEA] COCCU_RS06725 GO:0006741 - NADP biosynthetic process [Evidence IEA] COCCU_RS06725 GO:0019674 - NAD metabolic process [Evidence IEA] COCCU_RS06735 GO:0006281 - DNA repair [Evidence IEA] COCCU_RS06735 GO:0006310 - DNA recombination [Evidence IEA] COCCU_RS06750 GO:0006221 - pyrimidine nucleotide biosynthetic process [Evidence IEA] COCCU_RS06750 GO:0006241 - CTP biosynthetic process [Evidence IEA] COCCU_RS06760 GO:0006310 - DNA recombination [Evidence IEA] COCCU_RS06765 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS14885 GO:0006468 - protein phosphorylation [Evidence IEA] COCCU_RS14885 GO:0019748 - secondary metabolic process [Evidence IEA] COCCU_RS06810 GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA] COCCU_RS06835 GO:0032259 - methylation [Evidence IEA] COCCU_RS06900 GO:0006605 - protein targeting [Evidence IEA] COCCU_RS06900 GO:0006886 - intracellular protein transport [Evidence IEA] COCCU_RS06900 GO:0017038 - protein import [Evidence IEA] COCCU_RS06910 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS06920 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS07000 GO:0006098 - pentose-phosphate shunt [Evidence IEA] COCCU_RS07010 GO:0006824 - cobalt ion transport [Evidence IEA] COCCU_RS07010 GO:0015693 - magnesium ion transport [Evidence IEA] COCCU_RS07025 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS07045 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS07055 GO:0009228 - thiamine biosynthetic process [Evidence IEA] COCCU_RS07120 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS07170 GO:0006497 - protein lipidation [Evidence IEA] COCCU_RS07170 GO:0042158 - lipoprotein biosynthetic process [Evidence IEA] COCCU_RS07190 GO:0009236 - cobalamin biosynthetic process [Evidence IEA] COCCU_RS07215 GO:0006508 - proteolysis [Evidence IEA] COCCU_RS07240 GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA] COCCU_RS07255 GO:0015628 - protein secretion by the type II secretion system [Evidence IEA] COCCU_RS07260 GO:0043953 - protein transport by the Tat complex [Evidence IEA] COCCU_RS07275 GO:0010498 - proteasomal protein catabolic process [Evidence IEA] COCCU_RS07275 GO:0019941 - modification-dependent protein catabolic process [Evidence IEA] COCCU_RS07275 GO:0070490 - protein pupylation [Evidence IEA] COCCU_RS07280 GO:0010498 - proteasomal protein catabolic process [Evidence IEA] COCCU_RS07280 GO:0019941 - modification-dependent protein catabolic process [Evidence IEA] COCCU_RS07285 GO:0010498 - proteasomal protein catabolic process [Evidence IEA] COCCU_RS07285 GO:0019941 - modification-dependent protein catabolic process [Evidence IEA] COCCU_RS07290 GO:0010498 - proteasomal protein catabolic process [Evidence IEA] COCCU_RS07290 GO:0019941 - modification-dependent protein catabolic process [Evidence IEA] COCCU_RS07300 GO:0006508 - proteolysis [Evidence IEA] COCCU_RS07310 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS07330 GO:0016117 - carotenoid biosynthetic process [Evidence IEA] COCCU_RS07335 GO:0009058 - biosynthetic process [Evidence IEA] COCCU_RS07340 GO:0008299 - isoprenoid biosynthetic process [Evidence IEA] COCCU_RS07360 GO:0006281 - DNA repair [Evidence IEA] COCCU_RS07375 GO:0006520 - amino acid metabolic process [Evidence IEA] COCCU_RS07380 GO:0000105 - histidine biosynthetic process [Evidence IEA] COCCU_RS07395 GO:0008643 - carbohydrate transport [Evidence IEA] COCCU_RS07405 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS07415 GO:0010125 - mycothiol biosynthetic process [Evidence IEA] COCCU_RS07420 GO:0016311 - dephosphorylation [Evidence IEA] COCCU_RS07435 GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA] COCCU_RS07500 GO:0006783 - heme biosynthetic process [Evidence IEA] COCCU_RS07515 GO:0006099 - tricarboxylic acid cycle [Evidence IEA] COCCU_RS07575 GO:0071586 - CAAX-box protein processing [Evidence IEA] COCCU_RS07585 GO:0016226 - iron-sulfur cluster assembly [Evidence IEA] COCCU_RS07590 GO:0006534 - cysteine metabolic process [Evidence IEA] COCCU_RS07595 GO:0016226 - iron-sulfur cluster assembly [Evidence IEA] COCCU_RS07600 GO:0016226 - iron-sulfur cluster assembly [Evidence IEA] COCCU_RS07605 GO:0016226 - iron-sulfur cluster assembly [Evidence IEA] COCCU_RS07645 GO:0048034 - heme O biosynthetic process [Evidence IEA] COCCU_RS07650 GO:0006098 - pentose-phosphate shunt [Evidence IEA] COCCU_RS07655 GO:0006098 - pentose-phosphate shunt [Evidence IEA] COCCU_RS07660 GO:0006098 - pentose-phosphate shunt [Evidence IEA] COCCU_RS07670 GO:0006098 - pentose-phosphate shunt [Evidence IEA] COCCU_RS07675 GO:0043952 - protein transport by the Sec complex [Evidence IEA] COCCU_RS07680 GO:0006099 - tricarboxylic acid cycle [Evidence IEA] COCCU_RS07680 GO:0015977 - carbon fixation [Evidence IEA] COCCU_RS07685 GO:0006096 - glycolytic process [Evidence IEA] COCCU_RS07695 GO:0006094 - gluconeogenesis [Evidence IEA] COCCU_RS07695 GO:0006096 - glycolytic process [Evidence IEA] COCCU_RS07695 GO:0019682 - glyceraldehyde-3-phosphate metabolic process [Evidence IEA] COCCU_RS07700 GO:0043937 - regulation of sporulation [Evidence IEA] COCCU_RS07715 GO:0006289 - nucleotide-excision repair [Evidence IEA] COCCU_RS07745 GO:0006098 - pentose-phosphate shunt [Evidence IEA] COCCU_RS07750 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS07755 GO:0006431 - methionyl-tRNA aminoacylation [Evidence IEA] COCCU_RS07760 GO:0036211 - protein modification process [Evidence IEA] COCCU_RS07790 GO:0006556 - S-adenosylmethionine biosynthetic process [Evidence IEA] COCCU_RS07795 GO:0015937 - coenzyme A biosynthetic process [Evidence IEA] COCCU_RS07795 GO:0015939 - pantothenate metabolic process [Evidence IEA] COCCU_RS07800 GO:0006351 - DNA-templated transcription [Evidence IEA] COCCU_RS07805 GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA] COCCU_RS07815 GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA] COCCU_RS07820 GO:0006807 - nitrogen compound metabolic process [Evidence IEA] COCCU_RS07825 GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA] COCCU_RS07835 GO:0006207 - 'de novo' pyrimidine nucleobase biosynthetic process [Evidence IEA] COCCU_RS07835 GO:0006520 - amino acid metabolic process [Evidence IEA] COCCU_RS07840 GO:0009116 - nucleoside metabolic process [Evidence IEA] COCCU_RS07860 GO:0006797 - polyphosphate metabolic process [Evidence IEA] COCCU_RS07865 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS07870 GO:0006414 - translational elongation [Evidence IEA] COCCU_RS07875 GO:0006508 - proteolysis [Evidence IEA] COCCU_RS07880 GO:0009423 - chorismate biosynthetic process [Evidence IEA] COCCU_RS07885 GO:0009423 - chorismate biosynthetic process [Evidence IEA] COCCU_RS07890 GO:0008652 - amino acid biosynthetic process [Evidence IEA] COCCU_RS07890 GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA] COCCU_RS07895 GO:0009073 - aromatic amino acid family biosynthetic process [Evidence IEA] COCCU_RS07910 GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA] COCCU_RS07910 GO:0071555 - cell wall organization [Evidence IEA] COCCU_RS07915 GO:0008150 - biological_process [Evidence IEA] COCCU_RS07920 GO:0006419 - alanyl-tRNA aminoacylation [Evidence IEA] COCCU_RS07925 GO:0006260 - DNA replication [Evidence IEA] COCCU_RS07935 GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA] COCCU_RS07950 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS07970 GO:0009063 - amino acid catabolic process [Evidence IEA] COCCU_RS07975 GO:0006427 - histidyl-tRNA aminoacylation [Evidence IEA] COCCU_RS07990 GO:0000413 - protein peptidyl-prolyl isomerization [Evidence IEA] COCCU_RS08010 GO:0015970 - guanosine tetraphosphate biosynthetic process [Evidence IEA] COCCU_RS08015 GO:0009116 - nucleoside metabolic process [Evidence IEA] COCCU_RS08025 GO:0043952 - protein transport by the Sec complex [Evidence IEA] COCCU_RS08030 GO:0043952 - protein transport by the Sec complex [Evidence IEA] COCCU_RS08035 GO:0009306 - protein secretion [Evidence IEA] COCCU_RS08040 GO:0006281 - DNA repair [Evidence IEA] COCCU_RS08040 GO:0006310 - DNA recombination [Evidence IEA] COCCU_RS08045 GO:0006310 - DNA recombination [Evidence IEA] COCCU_RS08050 GO:0006310 - DNA recombination [Evidence IEA] COCCU_RS08060 GO:0042823 - pyridoxal phosphate biosynthetic process [Evidence IEA] COCCU_RS08075 GO:0042823 - pyridoxal phosphate biosynthetic process [Evidence IEA] COCCU_RS08095 GO:0008654 - phospholipid biosynthetic process [Evidence IEA] COCCU_RS08105 GO:0006435 - threonyl-tRNA aminoacylation [Evidence IEA] COCCU_RS08180 GO:0006979 - response to oxidative stress [Evidence IEA] COCCU_RS08180 GO:0030091 - protein repair [Evidence IEA] COCCU_RS08200 GO:0008615 - pyridoxine biosynthetic process [Evidence IEA] COCCU_RS08200 GO:0009228 - thiamine biosynthetic process [Evidence IEA] COCCU_RS08200 GO:0009240 - isopentenyl diphosphate biosynthetic process [Evidence IEA] COCCU_RS08215 GO:0006226 - dUMP biosynthetic process [Evidence IEA] COCCU_RS08215 GO:0046081 - dUTP catabolic process [Evidence IEA] COCCU_RS08230 GO:0006020 - inositol metabolic process [Evidence IEA] COCCU_RS08230 GO:0046855 - obsolete inositol phosphate dephosphorylation [Evidence IEA] COCCU_RS08240 GO:0006352 - DNA-templated transcription initiation [Evidence IEA] COCCU_RS08275 GO:0008152 - metabolic process [Evidence IEA] COCCU_RS08290 GO:0006012 - galactose metabolic process [Evidence IEA] COCCU_RS08300 GO:0043248 - proteasome assembly [Evidence IEA] COCCU_RS08300 GO:0051131 - chaperone-mediated protein complex assembly [Evidence IEA] COCCU_RS08340 GO:0006139 - nucleobase-containing compound metabolic process [Evidence IEA] COCCU_RS08370 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS08380 GO:0006282 - regulation of DNA repair [Evidence IEA] COCCU_RS08380 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS08390 GO:0006808 - regulation of nitrogen utilization [Evidence IEA] COCCU_RS08390 GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA] COCCU_RS08400 GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA] COCCU_RS08405 GO:0009401 - phosphoenolpyruvate-dependent sugar phosphotransferase system [Evidence IEA] COCCU_RS08410 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS08415 GO:0008150 - biological_process [Evidence IEA] COCCU_RS08430 GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA] COCCU_RS08435 GO:0006400 - tRNA modification [Evidence IEA] COCCU_RS08460 GO:0006400 - tRNA modification [Evidence IEA] COCCU_RS08480 GO:0006865 - amino acid transport [Evidence IEA] COCCU_RS08490 GO:0006281 - DNA repair [Evidence IEA] COCCU_RS08490 GO:0006310 - DNA recombination [Evidence IEA] COCCU_RS08490 GO:0009432 - SOS response [Evidence IEA] COCCU_RS08530 GO:0008654 - phospholipid biosynthetic process [Evidence IEA] COCCU_RS08560 GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA] COCCU_RS08565 GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA] COCCU_RS08570 GO:0009089 - lysine biosynthetic process via diaminopimelate [Evidence IEA] COCCU_RS08585 GO:0006396 - RNA processing [Evidence IEA] COCCU_RS08585 GO:0006402 - mRNA catabolic process [Evidence IEA] COCCU_RS08590 GO:0006412 - translation [Evidence IEA] COCCU_RS08605 GO:0006400 - tRNA modification [Evidence IEA] COCCU_RS08620 GO:0006855 - xenobiotic transmembrane transport [Evidence IEA] COCCU_RS08630 GO:0006396 - RNA processing [Evidence IEA] COCCU_RS08640 GO:0006413 - translational initiation [Evidence IEA] COCCU_RS08650 GO:0006353 - DNA-templated transcription termination [Evidence IEA] COCCU_RS08655 GO:0042274 - ribosomal small subunit biogenesis [Evidence IEA] COCCU_RS08665 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS08670 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS08675 GO:0006418 - tRNA aminoacylation for protein translation [Evidence IEA] COCCU_RS08675 GO:0006433 - prolyl-tRNA aminoacylation [Evidence IEA] COCCU_RS08685 GO:0019354 - siroheme biosynthetic process [Evidence IEA] COCCU_RS08705 GO:0006099 - tricarboxylic acid cycle [Evidence IEA] COCCU_RS08715 GO:0010126 - mycothiol metabolic process [Evidence IEA] COCCU_RS08720 GO:0051252 - regulation of RNA metabolic process [Evidence IEA] COCCU_RS08740 GO:0036211 - protein modification process [Evidence IEA] COCCU_RS08750 GO:0044237 - cellular metabolic process [Evidence IEA] COCCU_RS08760 GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA] COCCU_RS08770 GO:0006006 - glucose metabolic process [Evidence IEA] COCCU_RS08790 GO:0031167 - rRNA methylation [Evidence IEA] COCCU_RS08805 GO:0006412 - translation [Evidence IEA] COCCU_RS08810 GO:0015949 - nucleobase-containing small molecule interconversion [Evidence IEA] COCCU_RS08815 GO:0006414 - translational elongation [Evidence IEA] COCCU_RS08820 GO:0006412 - translation [Evidence IEA] COCCU_RS14690 GO:0006508 - proteolysis [Evidence IEA] COCCU_RS08830 GO:0006313 - DNA transposition [Evidence IEA] COCCU_RS08835 GO:0009294 - DNA-mediated transformation [Evidence IEA] COCCU_RS08860 GO:0006465 - signal peptide processing [Evidence IEA] COCCU_RS08860 GO:0009306 - protein secretion [Evidence IEA] COCCU_RS08865 GO:0006412 - translation [Evidence IEA] COCCU_RS08880 GO:0009228 - thiamine biosynthetic process [Evidence IEA] COCCU_RS08905 GO:0008033 - tRNA processing [Evidence IEA] COCCU_RS08910 GO:0006364 - rRNA processing [Evidence IEA] COCCU_RS08925 GO:0006412 - translation [Evidence IEA] COCCU_RS08940 GO:0009306 - protein secretion [Evidence IEA] COCCU_RS08955 GO:0072488 - ammonium transmembrane transport [Evidence IEA] COCCU_RS08960 GO:0009306 - protein secretion [Evidence IEA] COCCU_RS08985 GO:0006814 - sodium ion transport [Evidence IEA] COCCU_RS08985 GO:0006865 - amino acid transport [Evidence IEA] COCCU_RS08990 GO:0006281 - DNA repair [Evidence IEA] COCCU_RS08990 GO:0006284 - base-excision repair [Evidence IEA] COCCU_RS08995 GO:0006396 - RNA processing [Evidence IEA] COCCU_RS09010 GO:0006520 - amino acid metabolic process [Evidence IEA] COCCU_RS09040 GO:0006096 - glycolytic process [Evidence IEA] COCCU_RS09045 GO:0009249 - protein lipoylation [Evidence IEA] COCCU_RS09050 GO:0000162 - tryptophan biosynthetic process [Evidence IEA] COCCU_RS09060 GO:0000105 - histidine biosynthetic process [Evidence IEA] COCCU_RS09065 GO:0000105 - histidine biosynthetic process [Evidence IEA] COCCU_RS09075 GO:0000105 - histidine biosynthetic process [Evidence IEA] COCCU_RS09075 GO:0000162 - tryptophan biosynthetic process [Evidence IEA] COCCU_RS09080 GO:0000105 - histidine biosynthetic process [Evidence IEA] COCCU_RS09085 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS09095 GO:0000105 - histidine biosynthetic process [Evidence IEA] COCCU_RS09100 GO:0000105 - histidine biosynthetic process [Evidence IEA] COCCU_RS09105 GO:0000105 - histidine biosynthetic process [Evidence IEA] COCCU_RS09130 GO:0019363 - pyridine nucleotide biosynthetic process [Evidence IEA] COCCU_RS09135 GO:0005980 - glycogen catabolic process [Evidence IEA] COCCU_RS09150 GO:0005992 - trehalose biosynthetic process [Evidence IEA] COCCU_RS09180 GO:0005992 - trehalose biosynthetic process [Evidence IEA] COCCU_RS09185 GO:0006520 - amino acid metabolic process [Evidence IEA] COCCU_RS09205 GO:0006260 - DNA replication [Evidence IEA] COCCU_RS09215 GO:0006099 - tricarboxylic acid cycle [Evidence IEA] COCCU_RS09235 GO:0001522 - pseudouridine synthesis [Evidence IEA] COCCU_RS09235 GO:0009451 - RNA modification [Evidence IEA] COCCU_RS09240 GO:0006508 - proteolysis [Evidence IEA] COCCU_RS09240 GO:0009306 - protein secretion [Evidence IEA] COCCU_RS09270 GO:0006260 - DNA replication [Evidence IEA] COCCU_RS09275 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS09290 GO:0006428 - isoleucyl-tRNA aminoacylation [Evidence IEA] COCCU_RS09305 GO:0090529 - cell septum assembly [Evidence IEA] COCCU_RS09320 GO:0000910 - cytokinesis [Evidence IEA] COCCU_RS09330 GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA] COCCU_RS09335 GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA] COCCU_RS09340 GO:0051301 - cell division [Evidence IEA] COCCU_RS09345 GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA] COCCU_RS09350 GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA] COCCU_RS09355 GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA] COCCU_RS09360 GO:0008360 - regulation of cell shape [Evidence IEA] COCCU_RS09360 GO:0009058 - biosynthetic process [Evidence IEA] COCCU_RS09360 GO:0051301 - cell division [Evidence IEA] COCCU_RS09365 GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA] COCCU_RS09380 GO:0051302 - regulation of cell division [Evidence IEA] COCCU_RS09415 GO:0006468 - protein phosphorylation [Evidence IEA] COCCU_RS09420 GO:0009423 - chorismate biosynthetic process [Evidence IEA] COCCU_RS09455 GO:0006508 - proteolysis [Evidence IEA] COCCU_RS09480 GO:0022900 - electron transport chain [Evidence IEA] COCCU_RS09490 GO:0006529 - asparagine biosynthetic process [Evidence IEA] COCCU_RS09505 GO:0009236 - cobalamin biosynthetic process [Evidence IEA] COCCU_RS09510 GO:0009081 - branched-chain amino acid metabolic process [Evidence IEA] COCCU_RS09515 GO:0006508 - proteolysis [Evidence IEA] COCCU_RS09530 GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA] COCCU_RS09535 GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA] COCCU_RS09540 GO:0019464 - glycine decarboxylation via glycine cleavage system [Evidence IEA] COCCU_RS09545 GO:0009249 - protein lipoylation [Evidence IEA] COCCU_RS09550 GO:0009107 - lipoate biosynthetic process [Evidence IEA] COCCU_RS09565 GO:0006542 - glutamine biosynthetic process [Evidence IEA] COCCU_RS09590 GO:0009432 - SOS response [Evidence IEA] COCCU_RS09590 GO:0030541 - plasmid partitioning [Evidence IEA] COCCU_RS09590 GO:0051290 - protein heterotetramerization [Evidence IEA] COCCU_RS09625 GO:0006812 - monoatomic cation transport [Evidence IEA] COCCU_RS09625 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS09675 GO:0009088 - threonine biosynthetic process [Evidence IEA] COCCU_RS09680 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS09695 GO:0006542 - glutamine biosynthetic process [Evidence IEA] COCCU_RS09710 GO:0006508 - proteolysis [Evidence IEA] COCCU_RS09750 GO:0008150 - biological_process [Evidence IEA] COCCU_RS09755 GO:0006470 - protein dephosphorylation [Evidence IEA] COCCU_RS09785 GO:0006086 - acetyl-CoA biosynthetic process from pyruvate [Evidence IEA] COCCU_RS09800 GO:0009245 - lipid A biosynthetic process [Evidence IEA] COCCU_RS09865 GO:0006269 - DNA replication, synthesis of RNA primer [Evidence IEA] COCCU_RS09880 GO:0006203 - dGTP catabolic process [Evidence IEA] COCCU_RS09905 GO:0006426 - glycyl-tRNA aminoacylation [Evidence IEA] COCCU_RS09910 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS09915 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS09930 GO:0006281 - DNA repair [Evidence IEA] COCCU_RS09930 GO:0006310 - DNA recombination [Evidence IEA] COCCU_RS09945 GO:0042254 - ribosome biogenesis [Evidence IEA] COCCU_RS09955 GO:0006364 - rRNA processing [Evidence IEA] COCCU_RS09960 GO:0006457 - protein folding [Evidence IEA] COCCU_RS09965 GO:0009408 - response to heat [Evidence IEA] COCCU_RS09970 GO:0006779 - porphyrin-containing compound biosynthetic process [Evidence IEA] COCCU_RS09985 GO:0005980 - glycogen catabolic process [Evidence IEA] COCCU_RS10000 GO:0006508 - proteolysis [Evidence IEA] COCCU_RS10015 GO:0008299 - isoprenoid biosynthetic process [Evidence IEA] COCCU_RS10040 GO:0009058 - biosynthetic process [Evidence IEA] COCCU_RS10065 GO:0015803 - branched-chain amino acid transport [Evidence IEA] COCCU_RS10080 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS10100 GO:0015716 - organic phosphonate transport [Evidence IEA] COCCU_RS10105 GO:0015716 - organic phosphonate transport [Evidence IEA] COCCU_RS10130 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS10150 GO:0008033 - tRNA processing [Evidence IEA] COCCU_RS10170 GO:0006351 - DNA-templated transcription [Evidence IEA] COCCU_RS10170 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS10170 GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA] COCCU_RS10215 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS10225 GO:0006099 - tricarboxylic acid cycle [Evidence IEA] COCCU_RS10230 GO:0019752 - carboxylic acid metabolic process [Evidence IEA] COCCU_RS10280 GO:0071705 - nitrogen compound transport [Evidence IEA] COCCU_RS10325 GO:0006810 - transport [Evidence IEA] COCCU_RS10345 GO:0006865 - amino acid transport [Evidence IEA] COCCU_RS10345 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS10370 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS10405 GO:0006412 - translation [Evidence IEA] COCCU_RS10410 GO:0006865 - amino acid transport [Evidence IEA] COCCU_RS10450 GO:0017148 - negative regulation of translation [Evidence IEA] COCCU_RS10455 GO:0009435 - NAD biosynthetic process [Evidence IEA] COCCU_RS10480 GO:0006561 - proline biosynthetic process [Evidence IEA] COCCU_RS10495 GO:0006561 - proline biosynthetic process [Evidence IEA] COCCU_RS10505 GO:0006412 - translation [Evidence IEA] COCCU_RS10510 GO:0006412 - translation [Evidence IEA] COCCU_RS10550 GO:0006730 - one-carbon metabolic process [Evidence IEA] COCCU_RS10555 GO:0006438 - valyl-tRNA aminoacylation [Evidence IEA] COCCU_RS10565 GO:0006108 - malate metabolic process [Evidence IEA] COCCU_RS10570 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS10600 GO:0042952 - beta-ketoadipate pathway [Evidence IEA] COCCU_RS10605 GO:0042919 - benzoate transport [Evidence IEA] COCCU_RS10610 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS10615 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS10635 GO:0046278 - 3,4-dihydroxybenzoate metabolic process [Evidence IEA] COCCU_RS10640 GO:0046278 - 3,4-dihydroxybenzoate metabolic process [Evidence IEA] COCCU_RS10645 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS10655 GO:0042952 - beta-ketoadipate pathway [Evidence IEA] COCCU_RS10670 GO:0044237 - cellular metabolic process [Evidence IEA] COCCU_RS10675 GO:0006725 - cellular aromatic compound metabolic process [Evidence IEA] COCCU_RS10690 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS10700 GO:0006508 - proteolysis [Evidence IEA] COCCU_RS10705 GO:0051083 - 'de novo' cotranslational protein folding [Evidence IEA] COCCU_RS10730 GO:0005975 - carbohydrate metabolic process [Evidence IEA] COCCU_RS10745 GO:0006508 - proteolysis [Evidence IEA] COCCU_RS10790 GO:0000160 - phosphorelay signal transduction system [Evidence IEA] COCCU_RS10790 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS10815 GO:0019346 - transsulfuration [Evidence IEA] COCCU_RS10830 GO:0006522 - alanine metabolic process [Evidence IEA] COCCU_RS10840 GO:0015703 - chromate transport [Evidence IEA] COCCU_RS10865 GO:0045900 - negative regulation of translational elongation [Evidence IEA] COCCU_RS10885 GO:0071768 - mycolic acid biosynthetic process [Evidence IEA] COCCU_RS10905 GO:0006046 - N-acetylglucosamine catabolic process [Evidence IEA] COCCU_RS10920 GO:0008150 - biological_process [Evidence IEA] COCCU_RS10925 GO:0006826 - iron ion transport [Evidence IEA] COCCU_RS10940 GO:0006826 - iron ion transport [Evidence IEA] COCCU_RS10985 GO:0006541 - glutamine metabolic process [Evidence IEA] COCCU_RS10990 GO:0006351 - DNA-templated transcription [Evidence IEA] COCCU_RS10990 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS10990 GO:0045892 - negative regulation of DNA-templated transcription [Evidence IEA] COCCU_RS11000 GO:0006064 - glucuronate catabolic process [Evidence IEA] COCCU_RS11010 GO:0005975 - carbohydrate metabolic process [Evidence IEA] COCCU_RS11015 GO:0006812 - monoatomic cation transport [Evidence IEA] COCCU_RS11015 GO:0008643 - carbohydrate transport [Evidence IEA] COCCU_RS11020 GO:0016052 - carbohydrate catabolic process [Evidence IEA] COCCU_RS11025 GO:0046177 - D-gluconate catabolic process [Evidence IEA] COCCU_RS11055 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS11095 GO:0006281 - DNA repair [Evidence IEA] COCCU_RS11100 GO:0008033 - tRNA processing [Evidence IEA] COCCU_RS11110 GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA] COCCU_RS11145 GO:0006508 - proteolysis [Evidence IEA] COCCU_RS11150 GO:0009435 - NAD biosynthetic process [Evidence IEA] COCCU_RS11175 GO:0006564 - L-serine biosynthetic process [Evidence IEA] COCCU_RS11185 GO:0009265 - 2'-deoxyribonucleotide biosynthetic process [Evidence IEA] COCCU_RS11200 GO:0006260 - DNA replication [Evidence IEA] COCCU_RS11205 GO:0009263 - deoxyribonucleotide biosynthetic process [Evidence IEA] COCCU_RS11215 GO:0006412 - translation [Evidence IEA] COCCU_RS11220 GO:0009435 - NAD biosynthetic process [Evidence IEA] COCCU_RS11225 GO:0006353 - DNA-templated transcription termination [Evidence IEA] COCCU_RS11260 GO:0005975 - carbohydrate metabolic process [Evidence IEA] COCCU_RS11265 GO:0006814 - sodium ion transport [Evidence IEA] COCCU_RS11265 GO:0006865 - amino acid transport [Evidence IEA] COCCU_RS11285 GO:0009097 - isoleucine biosynthetic process [Evidence IEA] COCCU_RS11285 GO:0009099 - valine biosynthetic process [Evidence IEA] COCCU_RS11305 GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA] COCCU_RS11310 GO:0006083 - acetate metabolic process [Evidence IEA] COCCU_RS11310 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS11315 GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA] COCCU_RS11320 GO:0006535 - cysteine biosynthetic process from serine [Evidence IEA] COCCU_RS11370 GO:0015940 - pantothenate biosynthetic process [Evidence IEA] COCCU_RS11390 GO:0008033 - tRNA processing [Evidence IEA] COCCU_RS11395 GO:0051049 - regulation of transport [Evidence IEA] COCCU_RS11425 GO:0010125 - mycothiol biosynthetic process [Evidence IEA] COCCU_RS11460 GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA] COCCU_RS11460 GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA] COCCU_RS11465 GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA] COCCU_RS11485 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS11490 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS11515 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS11525 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS11530 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS11595 GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA] COCCU_RS11600 GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA] COCCU_RS11630 GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA] COCCU_RS11640 GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA] COCCU_RS11655 GO:0009058 - biosynthetic process [Evidence IEA] COCCU_RS11660 GO:0006189 - 'de novo' IMP biosynthetic process [Evidence IEA] COCCU_RS11660 GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA] COCCU_RS11675 GO:0007165 - signal transduction [Evidence IEA] COCCU_RS11680 GO:0000160 - phosphorelay signal transduction system [Evidence IEA] COCCU_RS11680 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS11685 GO:0001522 - pseudouridine synthesis [Evidence IEA] COCCU_RS11690 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS11705 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS11725 GO:0009085 - lysine biosynthetic process [Evidence IEA] COCCU_RS11735 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS14740 GO:0005992 - trehalose biosynthetic process [Evidence IEA] COCCU_RS11775 GO:0030001 - metal ion transport [Evidence IEA] COCCU_RS11775 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS11785 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS11795 GO:0009451 - RNA modification [Evidence IEA] COCCU_RS11800 GO:0006423 - cysteinyl-tRNA aminoacylation [Evidence IEA] COCCU_RS11820 GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA] COCCU_RS11825 GO:0019288 - isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway [Evidence IEA] COCCU_RS11840 GO:0006281 - DNA repair [Evidence IEA] COCCU_RS11860 GO:0006284 - base-excision repair [Evidence IEA] COCCU_RS11885 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS11900 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS11915 GO:0006430 - lysyl-tRNA aminoacylation [Evidence IEA] COCCU_RS11935 GO:0006826 - iron ion transport [Evidence IEA] COCCU_RS11950 GO:0015891 - siderophore transport [Evidence IEA] COCCU_RS11985 GO:0071705 - nitrogen compound transport [Evidence IEA] COCCU_RS11995 GO:0015940 - pantothenate biosynthetic process [Evidence IEA] COCCU_RS12015 GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA] COCCU_RS12020 GO:0006760 - folic acid-containing compound metabolic process [Evidence IEA] COCCU_RS12025 GO:0009396 - folic acid-containing compound biosynthetic process [Evidence IEA] COCCU_RS12030 GO:0042559 - pteridine-containing compound biosynthetic process [Evidence IEA] COCCU_RS12030 GO:0046654 - tetrahydrofolate biosynthetic process [Evidence IEA] COCCU_RS12035 GO:0006508 - proteolysis [Evidence IEA] COCCU_RS12035 GO:0051301 - cell division [Evidence IEA] COCCU_RS12040 GO:0006166 - purine ribonucleoside salvage [Evidence IEA] COCCU_RS12045 GO:0006400 - tRNA modification [Evidence IEA] COCCU_RS12050 GO:0009252 - peptidoglycan biosynthetic process [Evidence IEA] COCCU_RS12095 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS12105 GO:0006793 - phosphorus metabolic process [Evidence IEA] COCCU_RS12120 GO:0006457 - protein folding [Evidence IEA] COCCU_RS12195 GO:0042773 - ATP synthesis coupled electron transport [Evidence IEA] COCCU_RS12200 GO:0006812 - monoatomic cation transport [Evidence IEA] COCCU_RS12205 GO:0034220 - monoatomic ion transmembrane transport [Evidence IEA] COCCU_RS12210 GO:0098662 - inorganic cation transmembrane transport [Evidence IEA] COCCU_RS12210 GO:1902600 - proton transmembrane transport [Evidence IEA] COCCU_RS12220 GO:0042398 - cellular modified amino acid biosynthetic process [Evidence IEA] COCCU_RS12250 GO:0032049 - cardiolipin biosynthetic process [Evidence IEA] COCCU_RS12255 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS12260 GO:0035435 - phosphate ion transmembrane transport [Evidence IEA] COCCU_RS12260 GO:0044341 - sodium-dependent phosphate transport [Evidence IEA] COCCU_RS12295 GO:0006085 - acetyl-CoA biosynthetic process [Evidence IEA] COCCU_RS12295 GO:0016310 - phosphorylation [Evidence IEA] COCCU_RS12315 GO:0009152 - purine ribonucleotide biosynthetic process [Evidence IEA] COCCU_RS12335 GO:0006164 - purine nucleotide biosynthetic process [Evidence IEA] COCCU_RS12355 GO:0005975 - carbohydrate metabolic process [Evidence IEA] COCCU_RS12355 GO:0006096 - glycolytic process [Evidence IEA] COCCU_RS12365 GO:0006396 - RNA processing [Evidence IEA] COCCU_RS12370 GO:0009220 - pyrimidine ribonucleotide biosynthetic process [Evidence IEA] COCCU_RS12385 GO:0000160 - phosphorelay signal transduction system [Evidence IEA] COCCU_RS12385 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS12390 GO:0000160 - phosphorelay signal transduction system [Evidence IEA] COCCU_RS12405 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS12430 GO:0006457 - protein folding [Evidence IEA] COCCU_RS12460 GO:0015813 - L-glutamate transmembrane transport [Evidence IEA] COCCU_RS12510 GO:0006457 - protein folding [Evidence IEA] COCCU_RS12515 GO:0006457 - protein folding [Evidence IEA] COCCU_RS12530 GO:1905887 - autoinducer AI-2 transmembrane transport [Evidence IEA] COCCU_RS12545 GO:1902604 - p-aminobenzoyl-glutamate transmembrane transport [Evidence IEA] COCCU_RS12555 GO:0009116 - nucleoside metabolic process [Evidence IEA] COCCU_RS12560 GO:0006810 - transport [Evidence IEA] COCCU_RS12575 GO:0019419 - sulfate reduction [Evidence IEA] COCCU_RS12575 GO:0070814 - hydrogen sulfide biosynthetic process [Evidence IEA] COCCU_RS12580 GO:0019379 - sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin) [Evidence IEA] COCCU_RS12615 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS12660 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS12675 GO:0009058 - biosynthetic process [Evidence IEA] COCCU_RS12680 GO:0006629 - lipid metabolic process [Evidence IEA] COCCU_RS12710 GO:0071586 - CAAX-box protein processing [Evidence IEA] COCCU_RS12730 GO:0009394 - 2'-deoxyribonucleotide metabolic process [Evidence IEA] COCCU_RS12740 GO:0009103 - lipopolysaccharide biosynthetic process [Evidence IEA] COCCU_RS12745 GO:0009246 - enterobacterial common antigen biosynthetic process [Evidence IEA] COCCU_RS12780 GO:0006313 - DNA transposition [Evidence IEA] COCCU_RS12860 GO:0005975 - carbohydrate metabolic process [Evidence IEA] COCCU_RS12885 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS12890 GO:0009058 - biosynthetic process [Evidence IEA] COCCU_RS12930 GO:0032259 - methylation [Evidence IEA] COCCU_RS12940 GO:0006094 - gluconeogenesis [Evidence IEA] COCCU_RS12955 GO:0006400 - tRNA modification [Evidence IEA] COCCU_RS12980 GO:0071704 - organic substance metabolic process [Evidence IEA] COCCU_RS12985 GO:0071704 - organic substance metabolic process [Evidence IEA] COCCU_RS13020 GO:0005975 - carbohydrate metabolic process [Evidence IEA] COCCU_RS13050 GO:0071768 - mycolic acid biosynthetic process [Evidence IEA] COCCU_RS13055 GO:0071768 - mycolic acid biosynthetic process [Evidence IEA] COCCU_RS13110 GO:0015693 - magnesium ion transport [Evidence IEA] COCCU_RS13130 GO:0009273 - peptidoglycan-based cell wall biogenesis [Evidence IEA] COCCU_RS13135 GO:0009253 - peptidoglycan catabolic process [Evidence IEA] COCCU_RS13140 GO:0006071 - glycerol metabolic process [Evidence IEA] COCCU_RS13155 GO:0006434 - seryl-tRNA aminoacylation [Evidence IEA] COCCU_RS13175 GO:0006260 - DNA replication [Evidence IEA] COCCU_RS13185 GO:0009094 - L-phenylalanine biosynthetic process [Evidence IEA] COCCU_RS13195 GO:0071586 - CAAX-box protein processing [Evidence IEA] COCCU_RS13200 GO:0070726 - cell wall assembly [Evidence IEA] COCCU_RS13230 GO:0006979 - response to oxidative stress [Evidence IEA] COCCU_RS13230 GO:0030091 - protein repair [Evidence IEA] COCCU_RS13240 GO:0006508 - proteolysis [Evidence IEA] COCCU_RS13245 GO:0017121 - plasma membrane phospholipid scrambling [Evidence IEA] COCCU_RS13255 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS13290 GO:0000160 - phosphorelay signal transduction system [Evidence IEA] COCCU_RS13290 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS13315 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS13330 GO:0001522 - pseudouridine synthesis [Evidence IEA] COCCU_RS13330 GO:0009451 - RNA modification [Evidence IEA] COCCU_RS14775 GO:0006313 - DNA transposition [Evidence IEA] COCCU_RS13440 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS13465 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS13475 GO:0006260 - DNA replication [Evidence IEA] COCCU_RS13485 GO:0006412 - translation [Evidence IEA] COCCU_RS13495 GO:0006412 - translation [Evidence IEA] COCCU_RS13525 GO:0006021 - inositol biosynthetic process [Evidence IEA] COCCU_RS13525 GO:0008654 - phospholipid biosynthetic process [Evidence IEA] COCCU_RS13530 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS13570 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS13585 GO:0000160 - phosphorelay signal transduction system [Evidence IEA] COCCU_RS13600 GO:0006725 - cellular aromatic compound metabolic process [Evidence IEA] COCCU_RS13630 GO:0046677 - response to antibiotic [Evidence IEA] COCCU_RS13630 GO:0071555 - cell wall organization [Evidence IEA] COCCU_RS13640 GO:0036297 - interstrand cross-link repair [Evidence IEA] COCCU_RS13660 GO:0016310 - phosphorylation [Evidence IEA] COCCU_RS13660 GO:0046177 - D-gluconate catabolic process [Evidence IEA] COCCU_RS13700 GO:0006429 - leucyl-tRNA aminoacylation [Evidence IEA] COCCU_RS13720 GO:0006400 - tRNA modification [Evidence IEA] COCCU_RS13735 GO:0006865 - amino acid transport [Evidence IEA] COCCU_RS13735 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS13745 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS13765 GO:0008272 - sulfate transport [Evidence IEA] COCCU_RS13785 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS13810 GO:1901023 - 4-hydroxyphenylacetate catabolic process [Evidence IEA] COCCU_RS13825 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS13845 GO:0009058 - biosynthetic process [Evidence IEA] COCCU_RS13855 GO:0000162 - tryptophan biosynthetic process [Evidence IEA] COCCU_RS13860 GO:0006568 - tryptophan metabolic process [Evidence IEA] COCCU_RS13865 GO:0000162 - tryptophan biosynthetic process [Evidence IEA] COCCU_RS13870 GO:0000162 - tryptophan biosynthetic process [Evidence IEA] COCCU_RS13885 GO:0006810 - transport [Evidence IEA] COCCU_RS13905 GO:0006865 - amino acid transport [Evidence IEA] COCCU_RS13915 GO:0006396 - RNA processing [Evidence IEA] COCCU_RS13930 GO:0015836 - lipid-linked peptidoglycan transport [Evidence IEA] COCCU_RS13930 GO:0034204 - lipid translocation [Evidence IEA] COCCU_RS13935 GO:0006352 - DNA-templated transcription initiation [Evidence IEA] COCCU_RS13935 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS13960 GO:0000910 - cytokinesis [Evidence IEA] COCCU_RS13960 GO:0007059 - chromosome segregation [Evidence IEA] COCCU_RS13970 GO:0031167 - rRNA methylation [Evidence IEA] COCCU_RS13970 GO:0046118 - 7-methylguanosine biosynthetic process [Evidence IEA] COCCU_RS13985 GO:0006396 - RNA processing [Evidence IEA] COCCU_RS13990 GO:0006412 - translation [Evidence IEA] COCCU_RS14000 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS14020 GO:0006725 - cellular aromatic compound metabolic process [Evidence IEA] COCCU_RS14020 GO:0019439 - aromatic compound catabolic process [Evidence IEA] COCCU_RS14035 GO:0006542 - glutamine biosynthetic process [Evidence IEA] COCCU_RS14065 GO:0006805 - xenobiotic metabolic process [Evidence IEA] COCCU_RS14115 GO:0006979 - response to oxidative stress [Evidence IEA] COCCU_RS14145 GO:0006313 - DNA transposition [Evidence IEA] COCCU_RS14235 GO:0071586 - CAAX-box protein processing [Evidence IEA] COCCU_RS14260 GO:0006310 - DNA recombination [Evidence IEA] COCCU_RS14265 GO:0006310 - DNA recombination [Evidence IEA] COCCU_RS14275 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS14280 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS14285 GO:0006631 - fatty acid metabolic process [Evidence IEA] COCCU_RS14330 GO:0019287 - isopentenyl diphosphate biosynthetic process, mevalonate pathway [Evidence IEA] COCCU_RS14345 GO:0006355 - regulation of DNA-templated transcription [Evidence IEA] COCCU_RS14365 GO:0006820 - monoatomic anion transport [Evidence IEA] COCCU_RS14410 GO:0055085 - transmembrane transport [Evidence IEA] COCCU_RS14450 GO:0009307 - DNA restriction-modification system [Evidence IEA]