-- dump date 20140619_042312 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 699246000001 SEQ_END SEQ_END NC_013895.2 1809746 1809746 DR NC_013895.2; contig end 1809746..1809746 Clostridiales genomosp. BVAB3 str. UPII9-5 YP_003474445.1 CDS dnaA NC_013895.2 94 1410 D identified by match to protein family HMM PF00308; match to protein family HMM PF08299; match to protein family HMM TIGR00362; chromosomal replication initiator protein DnaA 94..1410 Clostridiales genomosp. BVAB3 str. UPII9-5 8811061 YP_003474444.1 CDS dnaN NC_013895.2 1653 2756 D identified by match to protein family HMM PF00712; match to protein family HMM PF02767; match to protein family HMM PF02768; match to protein family HMM TIGR00663; DNA polymerase III subunit beta 1653..2756 Clostridiales genomosp. BVAB3 str. UPII9-5 8810141 YP_003474443.1 CDS HMPREF0868_0091 NC_013895.2 2820 3968 D identified by match to protein family HMM PF02463; match to protein family HMM TIGR00611; putative DNA replication and repair protein RecF 2820..3968 Clostridiales genomosp. BVAB3 str. UPII9-5 8810278 YP_003474442.1 CDS HMPREF0868_0090 NC_013895.2 3990 4268 D hypothetical protein 3990..4268 Clostridiales genomosp. BVAB3 str. UPII9-5 8810798 YP_003474441.1 CDS gyrB NC_013895.2 4311 6401 D identified by match to protein family HMM PF00204; match to protein family HMM PF00986; match to protein family HMM PF01751; match to protein family HMM PF02518; match to protein family HMM TIGR01059; DNA gyrase subunit B 4311..6401 Clostridiales genomosp. BVAB3 str. UPII9-5 8810148 YP_003474440.1 CDS HMPREF0868_0088 NC_013895.2 6498 7466 R identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; ParB-like protein complement(6498..7466) Clostridiales genomosp. BVAB3 str. UPII9-5 8811218 YP_003474439.1 CDS soj NC_013895.2 7588 8367 R identified by match to protein family HMM PF01656; sporulation initiation inhibitor protein Soj complement(7588..8367) Clostridiales genomosp. BVAB3 str. UPII9-5 8810614 YP_003474438.1 CDS HMPREF0868_0086 NC_013895.2 8503 8619 D hypothetical protein 8503..8619 Clostridiales genomosp. BVAB3 str. UPII9-5 8811440 YP_003474437.1 CDS HMPREF0868_0085 NC_013895.2 8682 8795 D hypothetical protein 8682..8795 Clostridiales genomosp. BVAB3 str. UPII9-5 8811111 YP_003933617.1 CDS HMPREF0868_0084 NC_013895.2 9485 10210 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 9485..10210 Clostridiales genomosp. BVAB3 str. UPII9-5 8810023 YP_003933618.1 CDS HMPREF0868_1647 NC_013895.2 10264 10587 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 10264..10587 Clostridiales genomosp. BVAB3 str. UPII9-5 9829212 YP_003933619.1 CDS HMPREF0868_0082 NC_013895.2 10747 10890 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 10747..10890 Clostridiales genomosp. BVAB3 str. UPII9-5 8810895 YP_003474436.1 CDS HMPREF0868_0081 NC_013895.2 11050 11535 R identified by match to protein family HMM PF00293; NUDIX family hydrolase complement(11050..11535) Clostridiales genomosp. BVAB3 str. UPII9-5 8810801 YP_003474435.1 CDS pstS NC_013895.2 11757 12587 D identified by match to protein family HMM PF01547; match to protein family HMM TIGR02136; phosphate binding protein 11757..12587 Clostridiales genomosp. BVAB3 str. UPII9-5 8810295 YP_003474434.1 CDS pstC NC_013895.2 12604 13497 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR02138; phosphate ABC transporter permease PstC 12604..13497 Clostridiales genomosp. BVAB3 str. UPII9-5 8810982 YP_003474433.1 CDS pstA NC_013895.2 13532 14401 D identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974; phosphate ABC transporter permease PstA 13532..14401 Clostridiales genomosp. BVAB3 str. UPII9-5 8810025 YP_003474432.1 CDS pstB NC_013895.2 14403 15161 D identified by match to protein family HMM PF00005; match to protein family HMM TIGR00972; phosphate ABC transporter ATP-binding protein 14403..15161 Clostridiales genomosp. BVAB3 str. UPII9-5 8811092 YP_003474431.1 CDS HMPREF0868_0076 NC_013895.2 15323 15991 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; putative DNA-binding response regulator 15323..15991 Clostridiales genomosp. BVAB3 str. UPII9-5 8810037 YP_003474430.1 CDS HMPREF0868_0075 NC_013895.2 15988 17316 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; putative alkaline phosphatase synthesis sensor protein PhoR 15988..17316 Clostridiales genomosp. BVAB3 str. UPII9-5 8810580 YP_003474429.1 CDS HMPREF0868_0074 NC_013895.2 17393 17806 D identified by match to protein family HMM PF00583; GNAT family acetyltransferase 17393..17806 Clostridiales genomosp. BVAB3 str. UPII9-5 8810382 YP_003474428.1 CDS HMPREF0868_0072 NC_013895.2 17848 18522 D hypothetical protein 17848..18522 Clostridiales genomosp. BVAB3 str. UPII9-5 8811449 YP_003474427.1 CDS HMPREF0868_0073 NC_013895.2 18512 18685 R hypothetical protein complement(18512..18685) Clostridiales genomosp. BVAB3 str. UPII9-5 8811157 YP_003474426.1 CDS HMPREF0868_0071 NC_013895.2 18833 21022 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein 18833..21022 Clostridiales genomosp. BVAB3 str. UPII9-5 8810703 YP_003474425.1 CDS HMPREF0868_0070 NC_013895.2 21382 23100 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 21382..23100 Clostridiales genomosp. BVAB3 str. UPII9-5 8810966 YP_003474424.1 CDS HMPREF0868_0069 NC_013895.2 23090 24796 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 23090..24796 Clostridiales genomosp. BVAB3 str. UPII9-5 8810440 YP_003474423.1 CDS HMPREF0868_0068 NC_013895.2 24905 26140 D identified by match to protein family HMM PF00578; match to protein family HMM PF08534; AhpC/TSA family antioxidant 24905..26140 Clostridiales genomosp. BVAB3 str. UPII9-5 8810369 YP_003474422.1 CDS HMPREF0868_0067 NC_013895.2 26200 26385 D hypothetical protein 26200..26385 Clostridiales genomosp. BVAB3 str. UPII9-5 8811423 YP_003474421.1 CDS HMPREF0868_0066 NC_013895.2 26378 27322 D identified by match to protein family HMM PF00037; 4Fe-4S binding domain-containing protein 26378..27322 Clostridiales genomosp. BVAB3 str. UPII9-5 8811474 YP_003474420.1 CDS HMPREF0868_0065 NC_013895.2 27326 28006 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; putative transcriptional regulatory protein CutR 27326..28006 Clostridiales genomosp. BVAB3 str. UPII9-5 8810101 YP_003474419.1 CDS HMPREF0868_0064 NC_013895.2 28061 28183 D hypothetical protein 28061..28183 Clostridiales genomosp. BVAB3 str. UPII9-5 8810824 YP_003474418.1 CDS HMPREF0868_0063 NC_013895.2 28200 29387 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; ATPase/histidine kinase/DNA gyrase B/HSP90 domain-containing protein 28200..29387 Clostridiales genomosp. BVAB3 str. UPII9-5 8811520 YP_003474417.1 CDS HMPREF0868_0061 NC_013895.2 29528 29656 D hypothetical protein 29528..29656 Clostridiales genomosp. BVAB3 str. UPII9-5 8810179 YP_003474416.1 CDS HMPREF0868_0060 NC_013895.2 29681 31591 D identified by match to protein family HMM PF01431; match to protein family HMM PF05649; putative neutral endopeptidase 29681..31591 Clostridiales genomosp. BVAB3 str. UPII9-5 8810622 YP_003474415.1 CDS HMPREF0868_0059 NC_013895.2 31722 32837 R hypothetical protein complement(31722..32837) Clostridiales genomosp. BVAB3 str. UPII9-5 8811503 YP_003474414.1 CDS HMPREF0868_0058 NC_013895.2 32876 33079 D hypothetical protein 32876..33079 Clostridiales genomosp. BVAB3 str. UPII9-5 8810466 YP_003474413.1 CDS HMPREF0868_0057 NC_013895.2 33261 34370 R hypothetical protein complement(33261..34370) Clostridiales genomosp. BVAB3 str. UPII9-5 8811362 YP_003474412.1 CDS HMPREF0868_0056 NC_013895.2 34524 35783 R identified by match to protein family HMM PF07690; major facilitator family transporter complement(34524..35783) Clostridiales genomosp. BVAB3 str. UPII9-5 8811012 YP_003474411.1 CDS HMPREF0868_0055 NC_013895.2 35876 36925 R identified by match to protein family HMM PF00561; hydrolase, alpha/beta domain-containing protein complement(35876..36925) Clostridiales genomosp. BVAB3 str. UPII9-5 8811284 YP_003474410.1 CDS HMPREF0868_0054 NC_013895.2 37001 38512 D identified by match to protein family HMM PF01743; tRNA nucleotidyltransferase/poly(A) polymerase family protein 37001..38512 Clostridiales genomosp. BVAB3 str. UPII9-5 8810822 YP_003474409.1 CDS adh1 NC_013895.2 38673 39821 R identified by match to protein family HMM PF00465; NADPH-dependent butanol dehydrogenase complement(38673..39821) Clostridiales genomosp. BVAB3 str. UPII9-5 8810321 YP_003474408.1 CDS HMPREF0868_0052 NC_013895.2 39943 40149 D hypothetical protein 39943..40149 Clostridiales genomosp. BVAB3 str. UPII9-5 8811439 YP_003474407.1 CDS secG NC_013895.2 40211 40453 D identified by match to protein family HMM PF03840; match to protein family HMM TIGR00810; preprotein translocase subunit SecG 40211..40453 Clostridiales genomosp. BVAB3 str. UPII9-5 8810552 YP_003474406.1 CDS HMPREF0868_0050 NC_013895.2 40497 40697 D hypothetical protein 40497..40697 Clostridiales genomosp. BVAB3 str. UPII9-5 8811233 YP_003474405.1 CDS HMPREF0868_0049 NC_013895.2 41229 43181 D identified by match to protein family HMM PF00575; match to protein family HMM PF00773; match to protein family HMM TIGR00358; putative ribonuclease R 41229..43181 Clostridiales genomosp. BVAB3 str. UPII9-5 8810341 YP_003474404.1 CDS HMPREF0868_0048 NC_013895.2 43348 43578 R hypothetical protein complement(43348..43578) Clostridiales genomosp. BVAB3 str. UPII9-5 8810285 YP_003474403.1 CDS HMPREF0868_0047 NC_013895.2 43663 45054 D identified by match to protein family HMM PF00919; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR01579; MiaB-like protein 43663..45054 Clostridiales genomosp. BVAB3 str. UPII9-5 8810460 YP_003474402.1 CDS HMPREF0868_0046 NC_013895.2 45156 45419 D identified by match to protein family HMM PF06135; hypothetical protein 45156..45419 Clostridiales genomosp. BVAB3 str. UPII9-5 8810911 YP_003474401.1 CDS HMPREF0868_0045 NC_013895.2 45502 45924 D identified by match to protein family HMM PF03652; match to protein family HMM TIGR00250; YqgF family RNAse H domain-containing protein 45502..45924 Clostridiales genomosp. BVAB3 str. UPII9-5 8810656 YP_003474400.1 CDS HMPREF0868_0044 NC_013895.2 45986 46420 D hypothetical protein 45986..46420 Clostridiales genomosp. BVAB3 str. UPII9-5 8810256 YP_003474399.1 CDS HMPREF0868_0043 NC_013895.2 46427 46828 D hypothetical protein 46427..46828 Clostridiales genomosp. BVAB3 str. UPII9-5 8810918 YP_003474398.1 CDS HMPREF0868_0042 NC_013895.2 46825 47913 D hypothetical protein 46825..47913 Clostridiales genomosp. BVAB3 str. UPII9-5 8811245 YP_003474397.1 CDS HMPREF0868_0041 NC_013895.2 47940 48974 D identified by match to protein family HMM PF02517; CAAX amino terminal protease family protein 47940..48974 Clostridiales genomosp. BVAB3 str. UPII9-5 8810924 YP_003474396.1 CDS HMPREF0868_0040 NC_013895.2 48987 52166 D hypothetical protein 48987..52166 Clostridiales genomosp. BVAB3 str. UPII9-5 8810343 YP_003474395.1 CDS HMPREF0868_0039 NC_013895.2 52259 53287 R identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family HMM TIGR01484; HAD hydrolase complement(52259..53287) Clostridiales genomosp. BVAB3 str. UPII9-5 8811239 YP_003474394.1 CDS HMPREF0868_0038 NC_013895.2 53339 54253 R identified by match to protein family HMM PF01557; FAH family protein complement(53339..54253) Clostridiales genomosp. BVAB3 str. UPII9-5 8810554 YP_003474393.1 CDS HMPREF0868_0037 NC_013895.2 54447 55718 D identified by match to protein family HMM PF07690; major facilitator family transporter 54447..55718 Clostridiales genomosp. BVAB3 str. UPII9-5 8810178 YP_003474392.1 CDS HMPREF0868_0036 NC_013895.2 55920 57023 R identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766; transposase, IS605 OrfB family protein complement(55920..57023) Clostridiales genomosp. BVAB3 str. UPII9-5 8810437 YP_003933620.1 CDS HMPREF0868_0035 NC_013895.2 57041 57250 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(57041..57250) Clostridiales genomosp. BVAB3 str. UPII9-5 8811488 YP_003474391.1 CDS HMPREF0868_0034 NC_013895.2 57621 60323 R putative type IV conjugative transfer system protein TraL complement(57621..60323) Clostridiales genomosp. BVAB3 str. UPII9-5 8810615 YP_003474390.1 CDS HMPREF0868_0033 NC_013895.2 60333 62822 R identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; E1-E2 ATPase complement(60333..62822) Clostridiales genomosp. BVAB3 str. UPII9-5 8810902 YP_003474389.1 CDS HMPREF0868_0032 NC_013895.2 62819 63316 R identified by match to protein family HMM PF00383; cytidine and deoxycytidylate deaminase zinc-binding region complement(62819..63316) Clostridiales genomosp. BVAB3 str. UPII9-5 8809941 YP_003474388.1 CDS HMPREF0868_0031 NC_013895.2 63522 65921 R identified by match to protein family HMM PF00905; match to protein family HMM PF00912; transglycosylase complement(63522..65921) Clostridiales genomosp. BVAB3 str. UPII9-5 8811036 YP_003474387.1 CDS HMPREF0868_0030 NC_013895.2 65963 66412 D hypothetical protein 65963..66412 Clostridiales genomosp. BVAB3 str. UPII9-5 8811329 YP_003474386.1 CDS HMPREF0868_0029 NC_013895.2 66934 68100 D hypothetical protein 66934..68100 Clostridiales genomosp. BVAB3 str. UPII9-5 8810655 YP_003474385.1 CDS HMPREF0868_0028 NC_013895.2 68132 69382 R identified by match to protein family HMM PF02388; FemAB family protein complement(68132..69382) Clostridiales genomosp. BVAB3 str. UPII9-5 8811170 YP_003474384.1 CDS HMPREF0868_0027 NC_013895.2 69669 70682 R identified by match to protein family HMM PF02653; putative ribose transport system permease RbsC complement(69669..70682) Clostridiales genomosp. BVAB3 str. UPII9-5 8810493 YP_003474383.1 CDS HMPREF0868_0026 NC_013895.2 70675 72180 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(70675..72180) Clostridiales genomosp. BVAB3 str. UPII9-5 8810997 YP_003474382.1 CDS HMPREF0868_0025 NC_013895.2 72350 73399 R identified by match to protein family HMM PF00532; periplasmic binding protein and sugar binding domain of the LacI family protein complement(72350..73399) Clostridiales genomosp. BVAB3 str. UPII9-5 8810331 YP_003474381.1 CDS HMPREF0868_0024 NC_013895.2 73712 73855 D hypothetical protein 73712..73855 Clostridiales genomosp. BVAB3 str. UPII9-5 8810698 YP_003933621.1 CDS HMPREF0868_1648 NC_013895.2 73870 73992 R hypothetical protein complement(73870..73992) Clostridiales genomosp. BVAB3 str. UPII9-5 9829208 YP_003474380.1 CDS HMPREF0868_0023 NC_013895.2 73985 76009 D identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; putative 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase 73985..76009 Clostridiales genomosp. BVAB3 str. UPII9-5 8811209 YP_003474378.1 CDS HMPREF0868_0021 NC_013895.2 76139 77161 D identified by match to protein family HMM PF01408; match to protein family HMM PF02894; NAD-binding domain-containing oxidoreductase 76139..77161 Clostridiales genomosp. BVAB3 str. UPII9-5 8811010 YP_003474377.1 CDS HMPREF0868_0020 NC_013895.2 77275 78285 D identified by match to protein family HMM PF01408; match to protein family HMM PF02894; putative inositol 2-dehydrogenase 77275..78285 Clostridiales genomosp. BVAB3 str. UPII9-5 8810317 YP_003474376.1 CDS HMPREF0868_0019 NC_013895.2 78339 79238 D identified by match to protein family HMM PF01261; putative inosose dehydratase 78339..79238 Clostridiales genomosp. BVAB3 str. UPII9-5 8810470 YP_003474375.1 CDS HMPREF0868_0018 NC_013895.2 79329 80468 D identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator 79329..80468 Clostridiales genomosp. BVAB3 str. UPII9-5 8811160 YP_003474374.1 CDS HMPREF0868_0017 NC_013895.2 80545 81798 D hypothetical protein 80545..81798 Clostridiales genomosp. BVAB3 str. UPII9-5 8810860 YP_003474373.1 CDS HMPREF0868_0016 NC_013895.2 81929 82957 D identified by match to protein family HMM PF00044; match to protein family HMM PF01113; match to protein family HMM PF02800; match to protein family HMM TIGR01546; type II glyceraldehyde-3-phosphate dehydrogenase 81929..82957 Clostridiales genomosp. BVAB3 str. UPII9-5 8810603 YP_003474372.1 CDS pgk NC_013895.2 82948 84204 D identified by match to protein family HMM PF00162; phosphoglycerate kinase 82948..84204 Clostridiales genomosp. BVAB3 str. UPII9-5 8811022 YP_003474371.1 CDS HMPREF0868_0014 NC_013895.2 84223 85080 D identified by match to protein family HMM PF00456; transketolase, thiamine diphosphate binding domain-containing protein 84223..85080 Clostridiales genomosp. BVAB3 str. UPII9-5 8809960 YP_003474370.1 CDS HMPREF0868_0013 NC_013895.2 85073 86035 D identified by match to protein family HMM PF02779; match to protein family HMM PF02780; transketolase, C-terminal domain-containing protein 85073..86035 Clostridiales genomosp. BVAB3 str. UPII9-5 8810163 YP_003474369.1 CDS iolB NC_013895.2 86143 86940 D identified by match to protein family HMM PF06845; myo-inositol catabolism protein 86143..86940 Clostridiales genomosp. BVAB3 str. UPII9-5 8811144 YP_003474368.1 CDS HMPREF0868_0011 NC_013895.2 87469 87966 R hypothetical protein complement(87469..87966) Clostridiales genomosp. BVAB3 str. UPII9-5 8810468 YP_003474367.1 CDS nspC NC_013895.2 88428 89810 R identified by match to protein family HMM PF00278; match to protein family HMM TIGR01047; carboxynorspermidine decarboxylase complement(88428..89810) Clostridiales genomosp. BVAB3 str. UPII9-5 8811194 YP_003474366.1 CDS lys1 NC_013895.2 89963 91162 R identified by match to protein family HMM PF03435; saccharopine dehydrogenase complement(89963..91162) Clostridiales genomosp. BVAB3 str. UPII9-5 8810489 YP_003474365.1 CDS speB NC_013895.2 91275 92147 R identified by match to protein family HMM PF00491; match to protein family HMM TIGR01230; agmatinase complement(91275..92147) Clostridiales genomosp. BVAB3 str. UPII9-5 8810126 YP_003474364.1 CDS speE NC_013895.2 92229 93089 R identified by match to protein family HMM PF01564; match to protein family HMM TIGR00417; spermidine synthase complement(92229..93089) Clostridiales genomosp. BVAB3 str. UPII9-5 8810624 YP_003474363.1 CDS HMPREF0868_0006 NC_013895.2 93063 93203 D putative lipoprotein 93063..93203 Clostridiales genomosp. BVAB3 str. UPII9-5 8810280 YP_003474361.1 CDS HMPREF0868_0004 NC_013895.2 93370 95409 R identified by match to protein family HMM PF00266; match to protein family HMM PF01041; match to protein family HMM PF01276; match to protein family HMM PF03711; arginine 2-monooxygenase family protein complement(93370..95409) Clostridiales genomosp. BVAB3 str. UPII9-5 8810384 YP_003474360.1 CDS speD NC_013895.2 95451 96275 R identified by match to protein family HMM PF02675; match to protein family HMM TIGR03331; S-adenosylmethionine decarboxylase proenzyme complement(95451..96275) Clostridiales genomosp. BVAB3 str. UPII9-5 8811278 YP_003474359.1 CDS HMPREF0868_0002 NC_013895.2 96425 97540 R hypothetical protein complement(96425..97540) Clostridiales genomosp. BVAB3 str. UPII9-5 8811566 YP_003475884.1 CDS HMPREF0868_1646 NC_013895.2 97808 98917 R hypothetical protein complement(97808..98917) Clostridiales genomosp. BVAB3 str. UPII9-5 8810729 YP_003475883.1 CDS HMPREF0868_1645 NC_013895.2 99119 99295 D hypothetical protein 99119..99295 Clostridiales genomosp. BVAB3 str. UPII9-5 8810479 YP_003475882.1 CDS HMPREF0868_1643 NC_013895.2 99422 100090 D identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549; HAD hydrolase 99422..100090 Clostridiales genomosp. BVAB3 str. UPII9-5 8811191 YP_003475881.1 CDS HMPREF0868_1644 NC_013895.2 100087 100560 R identified by match to protein family HMM PF04073; match to protein family HMM TIGR00011; YbaK/EbsC protein complement(100087..100560) Clostridiales genomosp. BVAB3 str. UPII9-5 8811009 YP_003475880.1 CDS HMPREF0868_1642 NC_013895.2 100624 100827 D hypothetical protein 100624..100827 Clostridiales genomosp. BVAB3 str. UPII9-5 8809952 YP_003475879.1 CDS HMPREF0868_1641 NC_013895.2 100920 101108 D hypothetical protein 100920..101108 Clostridiales genomosp. BVAB3 str. UPII9-5 8811432 YP_003475878.1 CDS HMPREF0868_1640 NC_013895.2 101189 101422 R hypothetical protein complement(101189..101422) Clostridiales genomosp. BVAB3 str. UPII9-5 8810605 YP_003475877.1 CDS HMPREF0868_1639 NC_013895.2 101394 106940 D hypothetical protein 101394..106940 Clostridiales genomosp. BVAB3 str. UPII9-5 8810670 YP_003475876.1 CDS HMPREF0868_1638 NC_013895.2 107059 107187 D hypothetical protein 107059..107187 Clostridiales genomosp. BVAB3 str. UPII9-5 8811308 YP_003475875.1 CDS HMPREF0868_1637 NC_013895.2 107330 108391 D hypothetical protein 107330..108391 Clostridiales genomosp. BVAB3 str. UPII9-5 8810434 YP_003475874.1 CDS HMPREF0868_1636 NC_013895.2 108756 109451 R hypothetical protein complement(108756..109451) Clostridiales genomosp. BVAB3 str. UPII9-5 8810135 YP_003475873.1 CDS HMPREF0868_1635 NC_013895.2 109620 110000 D identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004; putative endoribonuclease L-PSP 109620..110000 Clostridiales genomosp. BVAB3 str. UPII9-5 8810742 YP_003475872.1 CDS HMPREF0868_1634 NC_013895.2 110396 111694 D identified by match to protein family HMM PF07690; major facilitator family transporter 110396..111694 Clostridiales genomosp. BVAB3 str. UPII9-5 8810130 YP_003475871.1 CDS HMPREF0868_1633 NC_013895.2 111861 112802 D identified by match to protein family HMM PF00724; putative NADPH dehydrogenase 111861..112802 Clostridiales genomosp. BVAB3 str. UPII9-5 8811281 YP_003475870.1 CDS HMPREF0868_1632 NC_013895.2 112952 113956 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; response regulator receiver domain-containing protein 112952..113956 Clostridiales genomosp. BVAB3 str. UPII9-5 8810257 YP_003475869.1 CDS HMPREF0868_1631 NC_013895.2 113960 115831 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; ATPase/histidine kinase/DNA gyrase B/HSP90 domain-containing protein 113960..115831 Clostridiales genomosp. BVAB3 str. UPII9-5 8810587 YP_003475868.1 CDS HMPREF0868_1630 NC_013895.2 115869 116750 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 115869..116750 Clostridiales genomosp. BVAB3 str. UPII9-5 8811497 YP_003475867.1 CDS HMPREF0868_1629 NC_013895.2 116747 117499 D hypothetical protein 116747..117499 Clostridiales genomosp. BVAB3 str. UPII9-5 8811102 YP_003475866.1 CDS HMPREF0868_1628 NC_013895.2 117515 117637 D hypothetical protein 117515..117637 Clostridiales genomosp. BVAB3 str. UPII9-5 8810255 YP_003475865.1 CDS pepN NC_013895.2 117655 120180 R identified by match to protein family HMM PF01433; membrane alanyl aminopeptidase complement(117655..120180) Clostridiales genomosp. BVAB3 str. UPII9-5 8810727 YP_003475864.1 CDS HMPREF0868_1626 NC_013895.2 120303 120422 D hypothetical protein 120303..120422 Clostridiales genomosp. BVAB3 str. UPII9-5 8810032 YP_003475863.1 CDS HMPREF0868_1625 NC_013895.2 120430 121404 D identified by match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF01266; match to protein family HMM PF07992; tRNA uridine 5-carboxymethylaminomethyl modification enzyme 120430..121404 Clostridiales genomosp. BVAB3 str. UPII9-5 8810367 YP_003475862.1 CDS HMPREF0868_1624 NC_013895.2 121585 123192 R hypothetical protein complement(121585..123192) Clostridiales genomosp. BVAB3 str. UPII9-5 8811401 YP_003475861.1 CDS HMPREF0868_1623 NC_013895.2 123485 124888 D hypothetical protein 123485..124888 Clostridiales genomosp. BVAB3 str. UPII9-5 8810175 YP_003475860.1 CDS HMPREF0868_1622 NC_013895.2 125053 126345 D hypothetical protein 125053..126345 Clostridiales genomosp. BVAB3 str. UPII9-5 8811552 YP_003475859.1 CDS HMPREF0868_1619 NC_013895.2 127261 127608 D hypothetical protein 127261..127608 Clostridiales genomosp. BVAB3 str. UPII9-5 8810985 YP_003475858.1 CDS pepD_1 NC_013895.2 127974 129449 D identified by match to protein family HMM PF03577; dipeptidase 127974..129449 Clostridiales genomosp. BVAB3 str. UPII9-5 8810049 YP_003475857.1 CDS HMPREF0868_1617 NC_013895.2 129617 130360 D identified by match to protein family HMM PF00578; match to protein family HMM PF08534; AhpC/TSA family antioxidant 129617..130360 Clostridiales genomosp. BVAB3 str. UPII9-5 8810282 YP_003475856.1 CDS HMPREF0868_1616 NC_013895.2 130398 131159 D identified by match to protein family HMM PF00578; match to protein family HMM PF08534; AhpC/TSA family antioxidant 130398..131159 Clostridiales genomosp. BVAB3 str. UPII9-5 8810429 YP_003475855.1 CDS kbl NC_013895.2 131356 132543 D identified by match to protein family HMM PF00155; match to protein family HMM PF00202; match to protein family HMM TIGR01822; glycine C-acetyltransferase 131356..132543 Clostridiales genomosp. BVAB3 str. UPII9-5 8811143 YP_003475854.1 CDS HMPREF0868_1614 NC_013895.2 132710 133144 D identified by match to protein family HMM PF00210; ferritin-like protein 132710..133144 Clostridiales genomosp. BVAB3 str. UPII9-5 8810243 YP_003475853.1 CDS HMPREF0868_1613 NC_013895.2 133311 133631 D identified by match to protein family HMM PF01381; Xre family toxin-antitoxin system antitoxin protein 133311..133631 Clostridiales genomosp. BVAB3 str. UPII9-5 8810922 YP_003475852.1 CDS HMPREF0868_1612 NC_013895.2 133678 133797 D hypothetical protein 133678..133797 Clostridiales genomosp. BVAB3 str. UPII9-5 8811463 YP_003475851.1 CDS HMPREF0868_1611 NC_013895.2 133826 134104 R identified by match to protein family HMM PF05016; match to protein family HMM TIGR00053; match to protein family HMM TIGR02385; RelE family toxin-antitoxin system toxin protein complement(133826..134104) Clostridiales genomosp. BVAB3 str. UPII9-5 8811083 YP_003475850.1 CDS HMPREF0868_1610 NC_013895.2 134104 134379 R identified by match to protein family HMM PF04221; match to protein family HMM TIGR02384; putative toxin-antitoxin system antitoxin component ribbon-helix-helix domain-containing protein complement(134104..134379) Clostridiales genomosp. BVAB3 str. UPII9-5 8811285 YP_003475849.1 CDS HMPREF0868_1609 NC_013895.2 134776 135525 R identified by match to protein family HMM PF01027; hypothetical protein complement(134776..135525) Clostridiales genomosp. BVAB3 str. UPII9-5 8810617 YP_003475848.1 CDS HMPREF0868_1608 NC_013895.2 135768 136616 D hypothetical protein 135768..136616 Clostridiales genomosp. BVAB3 str. UPII9-5 8811499 YP_003475847.1 CDS HMPREF0868_1607 NC_013895.2 136618 137955 D identified by match to protein family HMM PF02492; CobW/P47K family protein 136618..137955 Clostridiales genomosp. BVAB3 str. UPII9-5 8810721 YP_003475846.1 CDS HMPREF0868_1606 NC_013895.2 137942 139732 D identified by match to protein family HMM PF03773; putative permease 137942..139732 Clostridiales genomosp. BVAB3 str. UPII9-5 8810204 YP_003475845.1 CDS HMPREF0868_1605 NC_013895.2 139779 140762 D identified by match to protein family HMM PF09323; match to protein family HMM TIGR03943; hypothetical protein 139779..140762 Clostridiales genomosp. BVAB3 str. UPII9-5 8810368 YP_003475844.1 CDS eno NC_013895.2 140913 142226 R identified by match to protein family HMM PF00113; match to protein family HMM PF03952; match to protein family HMM TIGR01060; phosphopyruvate hydratase complement(140913..142226) Clostridiales genomosp. BVAB3 str. UPII9-5 8809981 YP_003475843.1 CDS HMPREF0868_1603 NC_013895.2 142491 142946 D identified by match to protein family HMM PF00903; glyoxalase family protein 142491..142946 Clostridiales genomosp. BVAB3 str. UPII9-5 8811100 YP_003475842.1 CDS HMPREF0868_1602 NC_013895.2 143115 144113 D identified by match to protein family HMM PF00485; phosphoribulokinase/uridine kinase family protein 143115..144113 Clostridiales genomosp. BVAB3 str. UPII9-5 8810136 YP_003475841.1 CDS HMPREF0868_1601 NC_013895.2 144129 146129 D identified by match to protein family HMM PF00534; match to protein family HMM PF03808; match to protein family HMM TIGR00696; glycosyltransferase group 1 family protein 144129..146129 Clostridiales genomosp. BVAB3 str. UPII9-5 8811371 YP_003475840.2 CDS HMPREF0868_1600 NC_013895.2 146160 147395 D identified by match to protein family HMM PF02350; match to protein family HMM TIGR00236; UDP-N-acetylglucosamine 2-epimerase 146160..147395 Clostridiales genomosp. BVAB3 str. UPII9-5 8810565 YP_003475839.1 CDS HMPREF0868_1599 NC_013895.2 147398 149038 D hypothetical protein 147398..149038 Clostridiales genomosp. BVAB3 str. UPII9-5 8811286 YP_003475838.1 CDS pulA_1 NC_013895.2 149195 151240 D identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02104; pullulanase 149195..151240 Clostridiales genomosp. BVAB3 str. UPII9-5 8810371 YP_003475837.1 CDS HMPREF0868_1597 NC_013895.2 151356 152696 R identified by match to protein family HMM PF00209; sodium:neurotransmitter symporter family protein complement(151356..152696) Clostridiales genomosp. BVAB3 str. UPII9-5 8811038 YP_003475835.1 CDS HMPREF0868_1596 NC_013895.2 152979 154622 R identified by match to protein family HMM PF01212; beta-eliminating lyase complement(152979..154622) Clostridiales genomosp. BVAB3 str. UPII9-5 8810155 YP_003475834.1 CDS HMPREF0868_1594 NC_013895.2 154981 155280 D hypothetical protein 154981..155280 Clostridiales genomosp. BVAB3 str. UPII9-5 8811295 YP_003475833.1 CDS HMPREF0868_1593 NC_013895.2 155396 155758 R identified by match to protein family HMM PF05016; RelE family toxin-antitoxin system toxin protein complement(155396..155758) Clostridiales genomosp. BVAB3 str. UPII9-5 8810314 YP_003475832.1 CDS HMPREF0868_1592 NC_013895.2 155755 156054 R identified by match to protein family HMM PF04221; match to protein family HMM TIGR02384; toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain-containing protein complement(155755..156054) Clostridiales genomosp. BVAB3 str. UPII9-5 8811351 YP_003475831.1 CDS HMPREF0868_1591 NC_013895.2 156182 156310 R hypothetical protein complement(156182..156310) Clostridiales genomosp. BVAB3 str. UPII9-5 8810449 YP_003475830.1 CDS HMPREF0868_1590 NC_013895.2 156562 157887 D identified by match to protein family HMM PF04143; YeeE/YedE family protein 156562..157887 Clostridiales genomosp. BVAB3 str. UPII9-5 8811479 YP_003475829.1 CDS HMPREF0868_1589 NC_013895.2 158005 159702 D identified by match to protein family HMM PF00070; match to protein family HMM PF00581; match to protein family HMM PF02852; match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase 158005..159702 Clostridiales genomosp. BVAB3 str. UPII9-5 8810714 YP_003475828.1 CDS HMPREF0868_1588 NC_013895.2 159901 161196 D identified by match to protein family HMM PF04143; YeeE/YedE family protein 159901..161196 Clostridiales genomosp. BVAB3 str. UPII9-5 8810943 YP_003475827.1 CDS HMPREF0868_1587 NC_013895.2 161298 162071 D identified by match to protein family HMM PF00528; ABC transporter permease 161298..162071 Clostridiales genomosp. BVAB3 str. UPII9-5 8810708 YP_003475826.1 CDS HMPREF0868_1586 NC_013895.2 162071 163180 D identified by match to protein family HMM PF04069; putative taurine ABC transporter periplasmic binding protein 162071..163180 Clostridiales genomosp. BVAB3 str. UPII9-5 8811268 YP_003475825.1 CDS HMPREF0868_1585 NC_013895.2 163290 164195 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 163290..164195 Clostridiales genomosp. BVAB3 str. UPII9-5 8810390 YP_003475824.1 CDS HMPREF0868_1584 NC_013895.2 164211 165122 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR substrate binding domain-containing protein 164211..165122 Clostridiales genomosp. BVAB3 str. UPII9-5 8809992 YP_003475823.1 CDS HMPREF0868_1583 NC_013895.2 165142 166242 R identified by match to protein family HMM PF00535; glycosyltransferase group 2 family protein complement(165142..166242) Clostridiales genomosp. BVAB3 str. UPII9-5 8811090 YP_003475822.1 CDS HMPREF0868_1582 NC_013895.2 166252 167304 R putative lipoprotein complement(166252..167304) Clostridiales genomosp. BVAB3 str. UPII9-5 8810551 YP_003475821.1 CDS HMPREF0868_1581 NC_013895.2 167338 168276 R identified by match to protein family HMM PF00892; hypothetical protein complement(167338..168276) Clostridiales genomosp. BVAB3 str. UPII9-5 8810839 YP_003475820.1 CDS HMPREF0868_1580 NC_013895.2 168273 170993 R identified by match to protein family HMM PF01633; match to protein family HMM PF01636; phosphotransferase enzyme family protein complement(168273..170993) Clostridiales genomosp. BVAB3 str. UPII9-5 8810336 YP_003475819.1 CDS HMPREF0868_1579 NC_013895.2 171457 171648 D hypothetical protein 171457..171648 Clostridiales genomosp. BVAB3 str. UPII9-5 8811424 YP_003475818.1 CDS HMPREF0868_1578 NC_013895.2 171843 178070 D hypothetical protein 171843..178070 Clostridiales genomosp. BVAB3 str. UPII9-5 8810414 YP_003475817.1 CDS HMPREF0868_1576 NC_013895.2 178095 179156 D hypothetical protein 178095..179156 Clostridiales genomosp. BVAB3 str. UPII9-5 8811105 YP_003475816.1 CDS HMPREF0868_1577 NC_013895.2 179149 179370 R hypothetical protein complement(179149..179370) Clostridiales genomosp. BVAB3 str. UPII9-5 8810944 YP_003475815.1 CDS HMPREF0868_1575 NC_013895.2 179358 180152 R identified by match to protein family HMM PF00665; putative transposase InsK for insertion sequence IS150 complement(179358..180152) Clostridiales genomosp. BVAB3 str. UPII9-5 8810647 YP_003933622.1 CDS HMPREF0868_1574 NC_013895.2 180176 180379 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(180176..180379) Clostridiales genomosp. BVAB3 str. UPII9-5 8811326 YP_003933623.1 CDS HMPREF0868_1573 NC_013895.2 180535 180738 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(180535..180738) Clostridiales genomosp. BVAB3 str. UPII9-5 8810477 YP_003475814.1 CDS HMPREF0868_1572 NC_013895.2 180807 181094 R identified by match to protein family HMM PF05016; match to protein family HMM TIGR02385; RelE family toxin-antitoxin system toxin protein complement(180807..181094) Clostridiales genomosp. BVAB3 str. UPII9-5 8810481 YP_003475813.1 CDS HMPREF0868_1571 NC_013895.2 181091 181366 R identified by match to protein family HMM PF04221; match to protein family HMM TIGR02384; putative toxin-antitoxin system antitoxin component ribbon-helix-helix domain-containing protein complement(181091..181366) Clostridiales genomosp. BVAB3 str. UPII9-5 8811151 YP_003933624.1 CDS HMPREF0868_1570 NC_013895.2 181488 181688 D hypothetical protein 181488..181688 Clostridiales genomosp. BVAB3 str. UPII9-5 8811101 YP_003475812.1 CDS HMPREF0868_1569 NC_013895.2 181690 181950 D Xre family toxin-antitoxin system antitoxin protein 181690..181950 Clostridiales genomosp. BVAB3 str. UPII9-5 8810065 YP_003475811.1 CDS HMPREF0868_1568 NC_013895.2 181993 182457 D identified by match to protein family HMM PF06114; toxin-antitoxin system, toxin component domain-containing protein 181993..182457 Clostridiales genomosp. BVAB3 str. UPII9-5 8810668 YP_003475810.1 CDS HMPREF0868_1567 NC_013895.2 182558 182689 D hypothetical protein 182558..182689 Clostridiales genomosp. BVAB3 str. UPII9-5 8811391 YP_003475809.1 CDS HMPREF0868_1566 NC_013895.2 182769 182909 R hypothetical protein complement(182769..182909) Clostridiales genomosp. BVAB3 str. UPII9-5 8810409 YP_003933625.1 CDS HMPREF0868_1650 NC_013895.2 183281 183406 D hypothetical protein 183281..183406 Clostridiales genomosp. BVAB3 str. UPII9-5 9829209 YP_003475807.1 CDS asnA NC_013895.2 185321 186328 D identified by match to protein family HMM PF03590; match to protein family HMM TIGR00669; aspartate--ammonia ligase 185321..186328 Clostridiales genomosp. BVAB3 str. UPII9-5 8811301 YP_003475806.1 CDS HMPREF0868_1562 NC_013895.2 186427 188232 D identified by match to protein family HMM PF01256; match to protein family HMM PF03853; match to protein family HMM TIGR00197; YjeF-like protein 186427..188232 Clostridiales genomosp. BVAB3 str. UPII9-5 8810995 YP_003475805.1 CDS alr NC_013895.2 188365 189525 D identified by match to protein family HMM PF00842; match to protein family HMM PF01168; match to protein family HMM TIGR00492; alanine racemase 188365..189525 Clostridiales genomosp. BVAB3 str. UPII9-5 8810239 YP_003475803.1 CDS HMPREF0868_1559 NC_013895.2 189673 189894 D hypothetical protein 189673..189894 Clostridiales genomosp. BVAB3 str. UPII9-5 8810920 YP_003475802.1 CDS HMPREF0868_1558 NC_013895.2 189956 190309 D hypothetical protein 189956..190309 Clostridiales genomosp. BVAB3 str. UPII9-5 8810015 YP_003475801.1 CDS HMPREF0868_1557 NC_013895.2 190408 191520 D hypothetical protein 190408..191520 Clostridiales genomosp. BVAB3 str. UPII9-5 8811466 YP_003475800.1 CDS ftsE NC_013895.2 191785 192465 D identified by match to protein family HMM PF00005; match to protein family HMM TIGR02673; cell division ATP-binding protein FtsE 191785..192465 Clostridiales genomosp. BVAB3 str. UPII9-5 8810650 YP_003475799.1 CDS HMPREF0868_1555 NC_013895.2 192474 193367 D identified by match to protein family HMM PF02687; efflux ABC transporter permease 192474..193367 Clostridiales genomosp. BVAB3 str. UPII9-5 8810312 YP_003475798.1 CDS HMPREF0868_1554 NC_013895.2 193493 194848 D identified by match to protein family HMM PF01551; M23 family peptidase 193493..194848 Clostridiales genomosp. BVAB3 str. UPII9-5 8810563 YP_003475797.1 CDS HMPREF0868_1553 NC_013895.2 195010 196413 D identified by match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; S41 family peptidase 195010..196413 Clostridiales genomosp. BVAB3 str. UPII9-5 8811262 YP_003475796.1 CDS HMPREF0868_1552 NC_013895.2 196400 197260 D identified by match to protein family HMM PF08241; methyltransferase domain-containing protein 196400..197260 Clostridiales genomosp. BVAB3 str. UPII9-5 8810122 YP_003475795.1 CDS hslO NC_013895.2 197411 198379 D identified by match to protein family HMM PF01430; chaperonin HslO 197411..198379 Clostridiales genomosp. BVAB3 str. UPII9-5 8811447 YP_003475794.1 CDS HMPREF0868_1550 NC_013895.2 198782 200665 D hypothetical protein 198782..200665 Clostridiales genomosp. BVAB3 str. UPII9-5 8810166 YP_003475793.1 CDS HMPREF0868_1549 NC_013895.2 201308 202657 D identified by match to protein family HMM PF01512; match to protein family HMM TIGR01945; putative electron transport complex protein RnfC 201308..202657 Clostridiales genomosp. BVAB3 str. UPII9-5 8810969 YP_003475792.1 CDS rnfD NC_013895.2 202661 203698 D identified by match to protein family HMM PF03116; match to protein family HMM TIGR01946; electron transport complex, RnfABCDGE type subunit D 202661..203698 Clostridiales genomosp. BVAB3 str. UPII9-5 8810218 YP_003475791.1 CDS rnfG NC_013895.2 203709 204290 D identified by match to protein family HMM PF04205; match to protein family HMM TIGR01947; electron transport complex, RnfABCDGE type subunit G 203709..204290 Clostridiales genomosp. BVAB3 str. UPII9-5 8810775 YP_003475790.1 CDS rnfE NC_013895.2 204293 205270 D identified by match to protein family HMM PF02508; match to protein family HMM TIGR01948; electron transport complex, RnfABCDGE type subunit E 204293..205270 Clostridiales genomosp. BVAB3 str. UPII9-5 8811317 YP_003475789.1 CDS rnfA NC_013895.2 205271 205864 D identified by match to protein family HMM PF02508; match to protein family HMM TIGR01943; electron transport complex, RnfABCDGE type subunit A 205271..205864 Clostridiales genomosp. BVAB3 str. UPII9-5 8810590 YP_003475788.1 CDS rnfB NC_013895.2 205878 206729 D identified by match to protein family HMM PF00037; match to protein family HMM PF04060; match to protein family HMM TIGR01944; electron transport complex, RnfABCDGE type subunit B 205878..206729 Clostridiales genomosp. BVAB3 str. UPII9-5 8811275 YP_003475787.1 CDS HMPREF0868_1543 NC_013895.2 206967 208055 D hypothetical protein 206967..208055 Clostridiales genomosp. BVAB3 str. UPII9-5 8810013 YP_003475786.1 CDS HMPREF0868_1542 NC_013895.2 208140 208640 D identified by match to protein family HMM PF05154; TM2 domain-containing protein 208140..208640 Clostridiales genomosp. BVAB3 str. UPII9-5 8811123 YP_003475785.1 CDS rpsJ NC_013895.2 208955 209266 D identified by match to protein family HMM PF00338; match to protein family HMM TIGR01049; 30S ribosomal protein S10 208955..209266 Clostridiales genomosp. BVAB3 str. UPII9-5 8810540 YP_003475784.1 CDS rplC NC_013895.2 209349 209984 D identified by match to protein family HMM PF00297; match to protein family HMM TIGR03625; 50S ribosomal protein L3 209349..209984 Clostridiales genomosp. BVAB3 str. UPII9-5 8810051 YP_003475783.1 CDS rplD NC_013895.2 210006 210629 D identified by match to protein family HMM PF00573; match to protein family HMM TIGR03953; 50S ribosomal protein L4 210006..210629 Clostridiales genomosp. BVAB3 str. UPII9-5 8810488 YP_003475782.1 CDS rplW NC_013895.2 210629 210982 D identified by match to protein family HMM PF00276; 50S ribosomal protein L23 210629..210982 Clostridiales genomosp. BVAB3 str. UPII9-5 8809946 YP_003475781.1 CDS rplB NC_013895.2 211008 211835 D identified by match to protein family HMM PF00181; match to protein family HMM PF03947; match to protein family HMM TIGR01171; 50S ribosomal protein L2 211008..211835 Clostridiales genomosp. BVAB3 str. UPII9-5 8810957 YP_003475780.1 CDS rpsS NC_013895.2 211850 212128 D identified by match to protein family HMM PF00203; match to protein family HMM TIGR01050; 30S ribosomal protein S19 211850..212128 Clostridiales genomosp. BVAB3 str. UPII9-5 8810070 YP_003475779.1 CDS rplV NC_013895.2 212152 212628 D identified by match to protein family HMM PF00237; match to protein family HMM TIGR01044; 50S ribosomal protein L22 212152..212628 Clostridiales genomosp. BVAB3 str. UPII9-5 8810695 YP_003475778.1 CDS rpsC NC_013895.2 212639 213307 D identified by match to protein family HMM PF00189; match to protein family HMM PF00417; match to protein family HMM PF07650; match to protein family HMM TIGR01009; 30S ribosomal protein S3 212639..213307 Clostridiales genomosp. BVAB3 str. UPII9-5 8811459 YP_003475777.1 CDS rplP NC_013895.2 213307 213726 D identified by match to protein family HMM PF00252; match to protein family HMM TIGR01164; 50S ribosomal protein L16 213307..213726 Clostridiales genomosp. BVAB3 str. UPII9-5 8810510 YP_003475776.1 CDS rpmC NC_013895.2 213723 213923 D identified by match to protein family HMM PF00831; match to protein family HMM TIGR00012; 50S ribosomal protein L29 213723..213923 Clostridiales genomosp. BVAB3 str. UPII9-5 8811183 YP_003475775.1 CDS rpsQ NC_013895.2 213935 214195 D identified by match to protein family HMM PF00366; match to protein family HMM TIGR03635; 30S ribosomal protein S17 213935..214195 Clostridiales genomosp. BVAB3 str. UPII9-5 8810303 YP_003475774.1 CDS rplN NC_013895.2 214225 214593 D identified by match to protein family HMM PF00238; match to protein family HMM TIGR01067; 50S ribosomal protein L14 214225..214593 Clostridiales genomosp. BVAB3 str. UPII9-5 8810956 YP_003475773.1 CDS rplX NC_013895.2 214604 214945 D identified by match to protein family HMM PF00467; match to protein family HMM TIGR01079; 50S ribosomal protein L24 214604..214945 Clostridiales genomosp. BVAB3 str. UPII9-5 8810248 YP_003475772.1 CDS rplE NC_013895.2 214956 215495 D identified by match to protein family HMM PF00281; match to protein family HMM PF00673; 50S ribosomal protein L5 214956..215495 Clostridiales genomosp. BVAB3 str. UPII9-5 8811324 YP_003475771.1 CDS rpsN NC_013895.2 215513 215698 D identified by match to protein family HMM PF00253; 30S ribosomal protein S14p/S29e 215513..215698 Clostridiales genomosp. BVAB3 str. UPII9-5 8810731 YP_003475770.1 CDS rpsH NC_013895.2 215719 216114 D identified by match to protein family HMM PF00410; 30S ribosomal protein S8 215719..216114 Clostridiales genomosp. BVAB3 str. UPII9-5 8810804 YP_003475769.1 CDS rplF NC_013895.2 216166 216711 D identified by match to protein family HMM PF00347; match to protein family HMM TIGR03654; 50S ribosomal protein L6 216166..216711 Clostridiales genomosp. BVAB3 str. UPII9-5 8810112 YP_003475768.1 CDS rplR NC_013895.2 216727 217089 D identified by match to protein family HMM PF00861; match to protein family HMM TIGR00060; 50S ribosomal protein L18 216727..217089 Clostridiales genomosp. BVAB3 str. UPII9-5 8811066 YP_003475767.1 CDS rpsE NC_013895.2 217102 217593 D identified by match to protein family HMM PF00333; match to protein family HMM PF03719; match to protein family HMM TIGR01021; 30S ribosomal protein S5 217102..217593 Clostridiales genomosp. BVAB3 str. UPII9-5 8811225 YP_003475766.1 CDS rpmD NC_013895.2 217605 217784 D identified by match to protein family HMM PF00327; match to protein family HMM TIGR01308; 50S ribosomal protein L30 217605..217784 Clostridiales genomosp. BVAB3 str. UPII9-5 8810450 YP_003475765.1 CDS rplO NC_013895.2 217797 218246 D identified by match to protein family HMM PF00256; match to protein family HMM PF01305; match to protein family HMM TIGR01071; 50S ribosomal protein L15 217797..218246 Clostridiales genomosp. BVAB3 str. UPII9-5 8811141 YP_003475764.1 CDS secY NC_013895.2 218250 219551 D identified by match to protein family HMM PF00344; match to protein family HMM TIGR00967; preprotein translocase subunit SecY 218250..219551 Clostridiales genomosp. BVAB3 str. UPII9-5 8810459 YP_003475763.1 CDS HMPREF0868_1519 NC_013895.2 219615 220268 D identified by match to protein family HMM PF00406; match to protein family HMM PF05191; match to protein family HMM TIGR01351; putative adenylate kinase 219615..220268 Clostridiales genomosp. BVAB3 str. UPII9-5 8811496 YP_003475762.1 CDS map NC_013895.2 220265 221029 D identified by match to protein family HMM PF00557; match to protein family HMM TIGR00500; methionine aminopeptidase 220265..221029 Clostridiales genomosp. BVAB3 str. UPII9-5 8810505 YP_003475761.1 CDS HMPREF0868_1517 NC_013895.2 221033 221341 D hypothetical protein 221033..221341 Clostridiales genomosp. BVAB3 str. UPII9-5 8810205 YP_003475760.1 CDS infA NC_013895.2 221323 221541 D identified by match to protein family HMM PF00575; match to protein family HMM PF01176; match to protein family HMM TIGR00008; translation initiation factor IF-1 221323..221541 Clostridiales genomosp. BVAB3 str. UPII9-5 8811042 YP_003475759.1 CDS rpmJ NC_013895.2 221692 221805 D identified by match to protein family HMM PF00444; match to protein family HMM TIGR01022; 50S ribosomal protein L36 221692..221805 Clostridiales genomosp. BVAB3 str. UPII9-5 8809957 YP_003475758.1 CDS rpsM NC_013895.2 221918 222286 D identified by match to protein family HMM PF00416; match to protein family HMM TIGR03631; 30S ribosomal protein S13 221918..222286 Clostridiales genomosp. BVAB3 str. UPII9-5 8810844 YP_003475757.1 CDS rpsK NC_013895.2 222300 222701 D identified by match to protein family HMM PF00411; match to protein family HMM TIGR03632; 30S ribosomal protein S11 222300..222701 Clostridiales genomosp. BVAB3 str. UPII9-5 8810542 YP_003475756.1 CDS rpoA NC_013895.2 222761 223726 D identified by match to protein family HMM PF01000; match to protein family HMM PF01193; match to protein family HMM PF03118; match to protein family HMM TIGR02027; DNA-directed RNA polymerase subunit alpha 222761..223726 Clostridiales genomosp. BVAB3 str. UPII9-5 8811455 YP_003475755.1 CDS rplQ NC_013895.2 223759 224280 D identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059; 50S ribosomal protein L17 223759..224280 Clostridiales genomosp. BVAB3 str. UPII9-5 8810482 YP_003475754.1 CDS HMPREF0868_1510 NC_013895.2 224354 226219 D identified by match to protein family HMM PF00005; cobalt ABC transporter ATP-binding protein 224354..226219 Clostridiales genomosp. BVAB3 str. UPII9-5 8811136 YP_003475753.1 CDS HMPREF0868_1509 NC_013895.2 226200 227009 D identified by match to protein family HMM PF02361; cobalt transport protein 226200..227009 Clostridiales genomosp. BVAB3 str. UPII9-5 8810422 YP_003475752.1 CDS truA NC_013895.2 227073 227897 D identified by match to protein family HMM PF01416; match to protein family HMM TIGR00071; tRNA pseudouridine synthase A 227073..227897 Clostridiales genomosp. BVAB3 str. UPII9-5 8811409 YP_003475751.1 CDS pncB NC_013895.2 227864 229321 D identified by match to protein family HMM PF04095; match to protein family HMM TIGR01513; nicotinate phosphoribosyltransferase 227864..229321 Clostridiales genomosp. BVAB3 str. UPII9-5 8810342 YP_003475750.1 CDS HMPREF0868_1506 NC_013895.2 229403 229918 D identified by match to protein family HMM PF00160; putative peptidyl-prolyl cis-trans isomerase B 229403..229918 Clostridiales genomosp. BVAB3 str. UPII9-5 8811080 YP_003475749.1 CDS metG NC_013895.2 229974 231992 D identified by match to protein family HMM PF01588; match to protein family HMM PF09334; match to protein family HMM TIGR00398; match to protein family HMM TIGR00399; methionine--tRNA ligase 229974..231992 Clostridiales genomosp. BVAB3 str. UPII9-5 8810197 YP_003475748.1 CDS HMPREF0868_1504 NC_013895.2 231992 232852 D identified by match to protein family HMM PF01026; match to protein family HMM TIGR00010; TatD family hydrolase 231992..232852 Clostridiales genomosp. BVAB3 str. UPII9-5 8810875 YP_003475747.1 CDS galE NC_013895.2 232897 233913 D identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993; match to protein family HMM TIGR01179; UDP-glucose 4-epimerase 232897..233913 Clostridiales genomosp. BVAB3 str. UPII9-5 8810028 YP_003475746.1 CDS HMPREF0868_1502 NC_013895.2 234058 234900 D hypothetical protein 234058..234900 Clostridiales genomosp. BVAB3 str. UPII9-5 8811540 YP_003475745.1 CDS HMPREF0868_1498 NC_013895.2 235367 235507 D hypothetical protein 235367..235507 Clostridiales genomosp. BVAB3 str. UPII9-5 8810114 YP_003475744.1 CDS HMPREF0868_1497 NC_013895.2 235691 236161 D hypothetical protein 235691..236161 Clostridiales genomosp. BVAB3 str. UPII9-5 8810589 YP_003475743.1 CDS HMPREF0868_1496 NC_013895.2 236179 236523 D hypothetical protein 236179..236523 Clostridiales genomosp. BVAB3 str. UPII9-5 8811448 YP_003475742.1 CDS HMPREF0868_1495 NC_013895.2 236520 237062 D hypothetical protein 236520..237062 Clostridiales genomosp. BVAB3 str. UPII9-5 8811114 YP_003475741.1 CDS HMPREF0868_1494 NC_013895.2 237157 237321 D hypothetical protein 237157..237321 Clostridiales genomosp. BVAB3 str. UPII9-5 8810244 YP_003475740.1 CDS gap NC_013895.2 237377 238441 D identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; type I glyceraldehyde-3-phosphate dehydrogenase 237377..238441 Clostridiales genomosp. BVAB3 str. UPII9-5 8810361 YP_003475739.1 CDS HMPREF0868_1492 NC_013895.2 238458 238571 D hypothetical protein 238458..238571 Clostridiales genomosp. BVAB3 str. UPII9-5 8811263 YP_003475738.1 CDS HMPREF0868_1491 NC_013895.2 238591 239832 D identified by match to protein family HMM PF00149; Ser/Thr phosphatase family protein 238591..239832 Clostridiales genomosp. BVAB3 str. UPII9-5 8810607 YP_003475737.1 CDS HMPREF0868_1490 NC_013895.2 239869 243183 D hypothetical protein 239869..243183 Clostridiales genomosp. BVAB3 str. UPII9-5 8811215 YP_003475736.1 CDS HMPREF0868_1489 NC_013895.2 243204 243716 R identified by match to protein family HMM PF06114; putative toxin-antitoxin system toxin component complement(243204..243716) Clostridiales genomosp. BVAB3 str. UPII9-5 8809961 YP_003475735.1 CDS HMPREF0868_1488 NC_013895.2 243713 244099 R identified by match to protein family HMM PF01381; Xre family toxin-antitoxin system antitoxin protein complement(243713..244099) Clostridiales genomosp. BVAB3 str. UPII9-5 8811388 YP_003475734.1 CDS HMPREF0868_1487 NC_013895.2 244210 245424 D identified by match to protein family HMM PF00817; ImpB/MucB/SamB family protein 244210..245424 Clostridiales genomosp. BVAB3 str. UPII9-5 8810104 YP_003475733.1 CDS HMPREF0868_1486 NC_013895.2 245506 246384 D identified by match to protein family HMM PF03755; match to protein family HMM PF08340; match to protein family HMM TIGR00255; hypothetical protein 245506..246384 Clostridiales genomosp. BVAB3 str. UPII9-5 8810792 YP_003475732.1 CDS HMPREF0868_1485 NC_013895.2 246413 246661 D identified by match to protein family HMM PF04025; hypothetical protein 246413..246661 Clostridiales genomosp. BVAB3 str. UPII9-5 8810568 YP_003475731.1 CDS gmk NC_013895.2 246664 247284 D identified by match to protein family HMM PF00625; match to protein family HMM TIGR03263; guanylate kinase 246664..247284 Clostridiales genomosp. BVAB3 str. UPII9-5 8811454 YP_003475730.1 CDS rpoZ NC_013895.2 247346 247849 D identified by match to protein family HMM PF01192; match to protein family HMM TIGR00690; DNA-directed RNA polymerase subunit omega 247346..247849 Clostridiales genomosp. BVAB3 str. UPII9-5 8810740 YP_003475729.1 CDS glyS NC_013895.2 247852 249240 D identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM TIGR00389; glycine--tRNA ligase 247852..249240 Clostridiales genomosp. BVAB3 str. UPII9-5 8810073 YP_003475728.1 CDS ppdK NC_013895.2 249320 251944 D identified by match to protein family HMM PF00391; match to protein family HMM PF01326; match to protein family HMM PF02896; match to protein family HMM TIGR01828; pyruvate, phosphate dikinase 249320..251944 Clostridiales genomosp. BVAB3 str. UPII9-5 8810453 YP_003475727.1 CDS HMPREF0868_1480 NC_013895.2 252019 253464 D identified by match to protein family HMM PF01266; match to protein family HMM PF04324; FAD dependent oxidoreductase 252019..253464 Clostridiales genomosp. BVAB3 str. UPII9-5 8810185 YP_003475726.1 CDS HMPREF0868_1479 NC_013895.2 253457 254791 D identified by match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase 253457..254791 Clostridiales genomosp. BVAB3 str. UPII9-5 8811353 YP_003475725.1 CDS HMPREF0868_1478 NC_013895.2 254784 255164 D identified by match to protein family HMM PF07892; hypothetical protein 254784..255164 Clostridiales genomosp. BVAB3 str. UPII9-5 8811564 YP_003475724.1 CDS HMPREF0868_1471 NC_013895.2 260733 262187 D hypothetical protein 260733..262187 Clostridiales genomosp. BVAB3 str. UPII9-5 8810083 YP_003475723.1 CDS HMPREF0868_1470 NC_013895.2 262250 262429 D hypothetical protein 262250..262429 Clostridiales genomosp. BVAB3 str. UPII9-5 8810427 YP_003475722.1 CDS HMPREF0868_1469 NC_013895.2 262453 264054 D identified by match to protein family HMM PF00496; family 5 extracellular solute-binding protein 262453..264054 Clostridiales genomosp. BVAB3 str. UPII9-5 8811126 YP_003475721.1 CDS HMPREF0868_1468 NC_013895.2 264163 266097 D identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; putative phosphonate C-P lyase system protein PhnK 264163..266097 Clostridiales genomosp. BVAB3 str. UPII9-5 8810186 YP_003475720.1 CDS HMPREF0868_1467 NC_013895.2 266090 267217 D identified by match to protein family HMM PF00528; ABC transporter permease 266090..267217 Clostridiales genomosp. BVAB3 str. UPII9-5 8810816 YP_003475719.1 CDS HMPREF0868_1466 NC_013895.2 267210 268136 D identified by match to protein family HMM PF00528; putative oligopeptide ABC transporter permease OppC 267210..268136 Clostridiales genomosp. BVAB3 str. UPII9-5 8810815 YP_003475718.1 CDS ung NC_013895.2 268169 268822 R identified by match to protein family HMM PF03167; match to protein family HMM TIGR00628; uracil-DNA glycosylase complement(268169..268822) Clostridiales genomosp. BVAB3 str. UPII9-5 8811333 YP_003475717.1 CDS HMPREF0868_1464 NC_013895.2 268821 269000 D hypothetical protein 268821..269000 Clostridiales genomosp. BVAB3 str. UPII9-5 8810451 YP_003475716.1 CDS HMPREF0868_1463 NC_013895.2 269017 270447 R identified by match to protein family HMM PF00324; amino acid permease complement(269017..270447) Clostridiales genomosp. BVAB3 str. UPII9-5 8811147 YP_003475715.1 CDS HMPREF0868_1462 NC_013895.2 270800 271630 R identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659; short chain dehydrogenase/reductase family oxidoreductase complement(270800..271630) Clostridiales genomosp. BVAB3 str. UPII9-5 8811193 YP_003475714.1 CDS HMPREF0868_1461 NC_013895.2 271808 273163 R identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein complement(271808..273163) Clostridiales genomosp. BVAB3 str. UPII9-5 8810313 YP_003475713.1 CDS brnQ NC_013895.2 273456 274805 R identified by match to protein family HMM PF05525; match to protein family HMM TIGR00796; branched-chain amino acid transport system II carrier protein complement(273456..274805) Clostridiales genomosp. BVAB3 str. UPII9-5 8811002 YP_003475712.2 CDS HMPREF0868_1459 NC_013895.2 275139 276269 D identified by match to protein family HMM PF00005; match to protein family HMM PF09383; ABC transporter ATP-binding protein 275139..276269 Clostridiales genomosp. BVAB3 str. UPII9-5 8810127 YP_003475711.1 CDS HMPREF0868_1458 NC_013895.2 276256 276912 D identified by match to protein family HMM PF00528; ABC transporter permease 276256..276912 Clostridiales genomosp. BVAB3 str. UPII9-5 8810048 YP_003475710.1 CDS HMPREF0868_1457 NC_013895.2 276933 277769 D identified by match to protein family HMM PF03180; NLPA lipoprotein 276933..277769 Clostridiales genomosp. BVAB3 str. UPII9-5 8810747 YP_003475709.1 CDS HMPREF0868_1456 NC_013895.2 278020 278628 D identified by match to protein family HMM PF01965; match to protein family HMM TIGR01383; DJ-1 family protein 278020..278628 Clostridiales genomosp. BVAB3 str. UPII9-5 8811489 YP_003475707.1 CDS HMPREF0868_1454 NC_013895.2 278886 279686 D identified by match to protein family HMM PF00027; cyclic nucleotide-binding domain-containing protein 278886..279686 Clostridiales genomosp. BVAB3 str. UPII9-5 8810458 YP_003475706.1 CDS HMPREF0868_1453 NC_013895.2 279670 281238 D identified by match to protein family HMM PF02457; match to protein family HMM TIGR00159; hypothetical protein 279670..281238 Clostridiales genomosp. BVAB3 str. UPII9-5 8810950 YP_003475705.1 CDS glmM NC_013895.2 281252 282610 D identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; match to protein family HMM TIGR01455; phosphoglucosamine mutase 281252..282610 Clostridiales genomosp. BVAB3 str. UPII9-5 8810026 YP_003475704.1 CDS HMPREF0868_1451 NC_013895.2 282692 283921 D identified by match to protein family HMM PF01520; N-acetylmuramoyl-L-alanine amidase 282692..283921 Clostridiales genomosp. BVAB3 str. UPII9-5 8810883 YP_003475703.1 CDS HMPREF0868_1450 NC_013895.2 284004 284864 D identified by match to protein family HMM PF00165; match to protein family HMM PF02311; AraC family transcriptional regulator 284004..284864 Clostridiales genomosp. BVAB3 str. UPII9-5 8810512 YP_003475702.1 CDS rpiA NC_013895.2 284904 285713 D identified by match to protein family HMM PF06026; match to protein family HMM TIGR00021; ribose 5-phosphate isomerase A 284904..285713 Clostridiales genomosp. BVAB3 str. UPII9-5 8810296 YP_003475701.1 CDS HMPREF0868_1448 NC_013895.2 285752 286591 D identified by match to protein family HMM PF00725; match to protein family HMM PF02737; putative 3-hydroxybutyryl-CoA dehydrogenase 285752..286591 Clostridiales genomosp. BVAB3 str. UPII9-5 8810817 YP_003475700.1 CDS HMPREF0868_1447 NC_013895.2 286593 287081 D hypothetical protein 286593..287081 Clostridiales genomosp. BVAB3 str. UPII9-5 8810095 YP_003475699.1 CDS HMPREF0868_1446 NC_013895.2 287078 287623 D putative heptaprenyl diphosphate synthase component I 287078..287623 Clostridiales genomosp. BVAB3 str. UPII9-5 8811402 YP_003475698.1 CDS HMPREF0868_1445 NC_013895.2 287770 288714 D hypothetical protein 287770..288714 Clostridiales genomosp. BVAB3 str. UPII9-5 8810709 YP_003475697.1 CDS HMPREF0868_1444 NC_013895.2 288952 290238 D putative lipoprotein 288952..290238 Clostridiales genomosp. BVAB3 str. UPII9-5 8811227 YP_003475696.1 CDS HMPREF0868_1443 NC_013895.2 290326 292848 R hypothetical protein complement(290326..292848) Clostridiales genomosp. BVAB3 str. UPII9-5 8810529 YP_003475695.1 CDS HMPREF0868_1442 NC_013895.2 292850 293827 R identified by match to protein family HMM PF00535; putative bactoprenol glucosyl transferase-like protein complement(292850..293827) Clostridiales genomosp. BVAB3 str. UPII9-5 8811154 YP_003475694.1 CDS HMPREF0868_1441 NC_013895.2 293954 294526 D identified by match to protein family HMM PF00857; isochorismatase family protein 293954..294526 Clostridiales genomosp. BVAB3 str. UPII9-5 8810385 YP_003475693.1 CDS HMPREF0868_1440 NC_013895.2 294523 297363 D identified by match to protein family HMM PF00590; putative porphobilinogen deaminase, dipyromethane cofactor binding domain-containing protein 294523..297363 Clostridiales genomosp. BVAB3 str. UPII9-5 8810351 YP_003475692.1 CDS HMPREF0868_1439 NC_013895.2 297416 298024 D identified by match to protein family HMM PF01817; chorismate mutase 297416..298024 Clostridiales genomosp. BVAB3 str. UPII9-5 8811299 YP_003475691.1 CDS HMPREF0868_1438 NC_013895.2 298003 298737 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 298003..298737 Clostridiales genomosp. BVAB3 str. UPII9-5 8810541 YP_003475690.1 CDS HMPREF0868_1437 NC_013895.2 298789 300519 D hypothetical protein 298789..300519 Clostridiales genomosp. BVAB3 str. UPII9-5 8811435 YP_003475689.1 CDS HMPREF0868_1436 NC_013895.2 300543 300677 D hypothetical protein 300543..300677 Clostridiales genomosp. BVAB3 str. UPII9-5 8810002 YP_003475688.1 CDS HMPREF0868_1435 NC_013895.2 300779 301102 D hypothetical protein 300779..301102 Clostridiales genomosp. BVAB3 str. UPII9-5 8810903 YP_003475687.1 CDS HMPREF0868_1434 NC_013895.2 301089 303125 D identified by match to protein family HMM PF01496; V-type ATPase 116kDa subunit family protein 301089..303125 Clostridiales genomosp. BVAB3 str. UPII9-5 8809967 YP_003475686.1 CDS HMPREF0868_1433 NC_013895.2 303217 303717 D identified by match to protein family HMM PF00137; V-type sodium ATPase subunit K 303217..303717 Clostridiales genomosp. BVAB3 str. UPII9-5 8810871 YP_003475685.1 CDS HMPREF0868_1432 NC_013895.2 303723 304325 D identified by match to protein family HMM PF01991; hypothetical protein 303723..304325 Clostridiales genomosp. BVAB3 str. UPII9-5 8810102 YP_003475684.1 CDS HMPREF0868_1431 NC_013895.2 304331 305515 D hypothetical protein 304331..305515 Clostridiales genomosp. BVAB3 str. UPII9-5 8810770 YP_003475683.1 CDS HMPREF0868_1430 NC_013895.2 305508 305849 D identified by match to protein family HMM PF01990; hypothetical protein 305508..305849 Clostridiales genomosp. BVAB3 str. UPII9-5 8810720 YP_003475682.1 CDS HMPREF0868_1429 NC_013895.2 305883 307664 D identified by match to protein family HMM PF00006; match to protein family HMM PF00306; match to protein family HMM PF02874; ATP synthase ab C-terminal domain-containing protein 305883..307664 Clostridiales genomosp. BVAB3 str. UPII9-5 8811389 YP_003475681.1 CDS HMPREF0868_1428 NC_013895.2 307675 309066 D identified by match to protein family HMM PF00006; match to protein family HMM PF00306; match to protein family HMM PF02874; ATP synthase ab C-terminal domain-containing protein 307675..309066 Clostridiales genomosp. BVAB3 str. UPII9-5 8810849 YP_003475680.1 CDS HMPREF0868_1427 NC_013895.2 309080 309784 D identified by match to protein family HMM PF01813; match to protein family HMM TIGR00309; V-type ATPase subunit D 309080..309784 Clostridiales genomosp. BVAB3 str. UPII9-5 8810016 YP_003475679.1 CDS HMPREF0868_1426 NC_013895.2 310038 313160 D hypothetical protein 310038..313160 Clostridiales genomosp. BVAB3 str. UPII9-5 8811169 YP_003475678.1 CDS HMPREF0868_1425 NC_013895.2 313161 316484 R identified by match to protein family HMM PF00176; match to protein family HMM PF00271; SNF2 family N-terminal domain-containing protein complement(313161..316484) Clostridiales genomosp. BVAB3 str. UPII9-5 8810191 YP_003475677.1 CDS HMPREF0868_1424 NC_013895.2 316483 317106 D hypothetical protein 316483..317106 Clostridiales genomosp. BVAB3 str. UPII9-5 8811328 YP_003475676.1 CDS HMPREF0868_1423 NC_013895.2 317151 317300 D hypothetical protein 317151..317300 Clostridiales genomosp. BVAB3 str. UPII9-5 8810616 YP_003475675.1 CDS HMPREF0868_1422 NC_013895.2 317501 317632 R hypothetical protein complement(317501..317632) Clostridiales genomosp. BVAB3 str. UPII9-5 8811469 YP_003475674.1 CDS HMPREF0868_1421 NC_013895.2 317778 318164 D hypothetical protein 317778..318164 Clostridiales genomosp. BVAB3 str. UPII9-5 8810753 YP_003933626.1 CDS HMPREF0868_1419 NC_013895.2 318509 319384 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; identified by match to protein family HMM PF00497; family 3 extracellular solute-binding protein 318509..319384 Clostridiales genomosp. BVAB3 str. UPII9-5 8810763 YP_003475673.1 CDS HMPREF0868_1418 NC_013895.2 319501 321243 D identified by match to protein family HMM PF00005; match to protein family HMM PF00528; match to protein family HMM TIGR01726; ABC transporter ATP-binding protein 319501..321243 Clostridiales genomosp. BVAB3 str. UPII9-5 8810086 YP_003475672.1 CDS HMPREF0868_1417 NC_013895.2 321357 321563 D identified by match to protein family HMM TIGR03980; hydrid cluster protein-associated redox disulfide domain-containing protein 321357..321563 Clostridiales genomosp. BVAB3 str. UPII9-5 8811415 YP_003475671.1 CDS HMPREF0868_1416 NC_013895.2 321567 322250 D identified by match to protein family HMM PF00392; match to protein family HMM PF07729; GntR family transcriptional regulator 321567..322250 Clostridiales genomosp. BVAB3 str. UPII9-5 8810352 YP_003475670.1 CDS HMPREF0868_1415 NC_013895.2 322390 323766 D identified by match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase 322390..323766 Clostridiales genomosp. BVAB3 str. UPII9-5 8811244 YP_003475669.1 CDS thiW NC_013895.2 323807 324370 D identified by match to protein family HMM TIGR02359; protein ThiW 323807..324370 Clostridiales genomosp. BVAB3 str. UPII9-5 8810972 YP_003475668.2 CDS HMPREF0868_1413 NC_013895.2 324345 325238 D identified by match to protein family HMM PF02110; putative hydroxyethylthiazole kinase 324345..325238 Clostridiales genomosp. BVAB3 str. UPII9-5 8810424 YP_003475667.1 CDS thiE NC_013895.2 325267 325902 D identified by match to protein family HMM PF02581; match to protein family HMM TIGR00693; thiamine-phosphate diphosphorylase 325267..325902 Clostridiales genomosp. BVAB3 str. UPII9-5 8810585 YP_003475666.1 CDS HMPREF0868_1411 NC_013895.2 326686 327264 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 326686..327264 Clostridiales genomosp. BVAB3 str. UPII9-5 8810772 YP_003475665.1 CDS HMPREF0868_1410 NC_013895.2 327385 329145 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 327385..329145 Clostridiales genomosp. BVAB3 str. UPII9-5 8810354 YP_003475664.1 CDS HMPREF0868_1409 NC_013895.2 329123 330841 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 329123..330841 Clostridiales genomosp. BVAB3 str. UPII9-5 8810199 YP_003475663.1 CDS HMPREF0868_1408 NC_013895.2 330880 331473 D identified by match to protein family HMM PF09605; match to protein family HMM TIGR02185; hypothetical protein 330880..331473 Clostridiales genomosp. BVAB3 str. UPII9-5 8811109 YP_003475662.1 CDS HMPREF0868_1407 NC_013895.2 331473 332153 D identified by match to protein family HMM PF02361; cobalt transport protein 331473..332153 Clostridiales genomosp. BVAB3 str. UPII9-5 8811222 YP_003475661.1 CDS HMPREF0868_1406 NC_013895.2 332150 333544 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 332150..333544 Clostridiales genomosp. BVAB3 str. UPII9-5 8811543 YP_003475660.1 CDS leuS NC_013895.2 333985 336498 R identified by match to protein family HMM PF00133; match to protein family HMM PF08264; match to protein family HMM PF09334; match to protein family HMM TIGR00396; leucine--tRNA ligase complement(333985..336498) Clostridiales genomosp. BVAB3 str. UPII9-5 8810896 YP_003475659.1 CDS traX NC_013895.2 336592 337422 R identified by match to protein family HMM PF05857; protein TraX complement(336592..337422) Clostridiales genomosp. BVAB3 str. UPII9-5 8810865 YP_003475658.1 CDS ftsA NC_013895.2 337646 338644 D identified by match to protein family HMM PF02491; match to protein family HMM PF06723; match to protein family HMM TIGR00904; cell division protein FtsA 337646..338644 Clostridiales genomosp. BVAB3 str. UPII9-5 8809968 YP_003475657.1 CDS rho NC_013895.2 338843 341212 D identified by match to protein family HMM PF00006; match to protein family HMM PF02178; match to protein family HMM PF07497; match to protein family HMM TIGR00767; transcription termination factor Rho 338843..341212 Clostridiales genomosp. BVAB3 str. UPII9-5 8811176 YP_003475656.1 CDS rpmE NC_013895.2 341339 341539 D identified by match to protein family HMM PF01197; match to protein family HMM TIGR00105; 50S ribosomal protein L31 341339..341539 Clostridiales genomosp. BVAB3 str. UPII9-5 8810496 YP_003475655.1 CDS HMPREF0868_1398 NC_013895.2 341624 342721 D identified by match to protein family HMM PF07136; hypothetical protein 341624..342721 Clostridiales genomosp. BVAB3 str. UPII9-5 8811208 YP_003475654.1 CDS HMPREF0868_1397 NC_013895.2 342699 343655 D identified by match to protein family HMM TIGR00536; methyltransferase, HemK family 342699..343655 Clostridiales genomosp. BVAB3 str. UPII9-5 8811021 YP_003475653.1 CDS prfA NC_013895.2 343676 344776 D identified by match to protein family HMM PF00472; match to protein family HMM PF03462; match to protein family HMM TIGR00019; peptide chain release factor 1 343676..344776 Clostridiales genomosp. BVAB3 str. UPII9-5 8810846 YP_003475652.1 CDS HMPREF0868_1395 NC_013895.2 344760 345971 D identified by match to protein family HMM PF01300; match to protein family HMM PF03481; match to protein family HMM TIGR00057; Sua5/YciO/YrdC/YwlC family protein 344760..345971 Clostridiales genomosp. BVAB3 str. UPII9-5 8810730 YP_003475651.1 CDS HMPREF0868_1394 NC_013895.2 345991 346440 D identified by match to protein family HMM PF01451; low molecular weight phosphotyrosine protein phosphatase 345991..346440 Clostridiales genomosp. BVAB3 str. UPII9-5 8811418 YP_003475650.1 CDS HMPREF0868_1393 NC_013895.2 346768 347358 D hypothetical protein 346768..347358 Clostridiales genomosp. BVAB3 str. UPII9-5 8810582 YP_003475649.1 CDS HMPREF0868_1392 NC_013895.2 347360 348274 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 347360..348274 Clostridiales genomosp. BVAB3 str. UPII9-5 8810305 YP_003475648.1 CDS HMPREF0868_1391 NC_013895.2 348267 349820 D hypothetical protein 348267..349820 Clostridiales genomosp. BVAB3 str. UPII9-5 8810998 YP_003475647.1 CDS HMPREF0868_1390 NC_013895.2 350056 355389 D identified by match to protein family HMM PF00082; match to protein family HMM PF02225; match to protein family HMM PF06280; hypothetical protein 350056..355389 Clostridiales genomosp. BVAB3 str. UPII9-5 8810914 YP_003475646.1 CDS HMPREF0868_1389 NC_013895.2 355471 355599 D hypothetical protein 355471..355599 Clostridiales genomosp. BVAB3 str. UPII9-5 8810005 YP_003475645.1 CDS HMPREF0868_1388 NC_013895.2 355676 356974 D hypothetical protein 355676..356974 Clostridiales genomosp. BVAB3 str. UPII9-5 8810441 YP_003475644.1 CDS trmB NC_013895.2 357051 357827 D identified by match to protein family HMM PF02390; match to protein family HMM TIGR00091; tRNA (guanine-N(7)-)-methyltransferase 357051..357827 Clostridiales genomosp. BVAB3 str. UPII9-5 8811400 YP_003475643.1 CDS rpsF NC_013895.2 358027 358311 D identified by match to protein family HMM PF01250; match to protein family HMM TIGR00166; 30S ribosomal protein S6 358027..358311 Clostridiales genomosp. BVAB3 str. UPII9-5 8811221 YP_003475642.1 CDS HMPREF0868_1385 NC_013895.2 358328 358846 D identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621; single-strand binding family protein 358328..358846 Clostridiales genomosp. BVAB3 str. UPII9-5 8810513 YP_003475641.1 CDS rpsR NC_013895.2 358879 359151 D identified by match to protein family HMM PF01084; match to protein family HMM TIGR00165; 30S ribosomal protein S18 358879..359151 Clostridiales genomosp. BVAB3 str. UPII9-5 8809993 YP_003475640.1 CDS HMPREF0868_1383 NC_013895.2 359334 360482 D putative lipoprotein 359334..360482 Clostridiales genomosp. BVAB3 str. UPII9-5 8810719 YP_003475639.1 CDS HMPREF0868_1382 NC_013895.2 360554 361435 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR substrate binding domain-containing protein 360554..361435 Clostridiales genomosp. BVAB3 str. UPII9-5 8811104 YP_003475638.1 CDS HMPREF0868_1381 NC_013895.2 361460 362143 R identified by match to protein family HMM PF01553; acyltransferase complement(361460..362143) Clostridiales genomosp. BVAB3 str. UPII9-5 8810217 YP_003475637.1 CDS HMPREF0868_1380 NC_013895.2 362320 365886 D hypothetical protein 362320..365886 Clostridiales genomosp. BVAB3 str. UPII9-5 8810901 YP_003475636.1 CDS HMPREF0868_1379 NC_013895.2 365876 370222 D identified by match to protein family HMM PF00580; putative ATP-dependent nuclease subunit A 365876..370222 Clostridiales genomosp. BVAB3 str. UPII9-5 8811249 YP_003475635.1 CDS HMPREF0868_1378 NC_013895.2 370276 371835 D identified by match to protein family HMM PF00370; match to protein family HMM PF02782; carbohydrate kinase, FGGY family protein 370276..371835 Clostridiales genomosp. BVAB3 str. UPII9-5 8809947 YP_003475634.1 CDS HMPREF0868_1377 NC_013895.2 372119 372577 D identified by match to protein family HMM PF01047; MarR family transcriptional regulator 372119..372577 Clostridiales genomosp. BVAB3 str. UPII9-5 8811118 YP_003475633.1 CDS HMPREF0868_1376 NC_013895.2 372710 372877 D hypothetical protein 372710..372877 Clostridiales genomosp. BVAB3 str. UPII9-5 8809975 YP_003475632.1 CDS HMPREF0868_1375 NC_013895.2 372951 373238 D hypothetical protein 372951..373238 Clostridiales genomosp. BVAB3 str. UPII9-5 8810814 YP_003475631.1 CDS HMPREF0868_1374 NC_013895.2 373269 376511 R identified by match to protein family HMM PF04313; match to protein family HMM PF04851; match to protein family HMM TIGR00348; HsdR family type I site-specific deoxyribonuclease complement(373269..376511) Clostridiales genomosp. BVAB3 str. UPII9-5 8810099 YP_003933627.1 CDS HMPREF0868_1373 NC_013895.2 376534 377031 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(376534..377031) Clostridiales genomosp. BVAB3 str. UPII9-5 8810618 YP_003475630.1 CDS HMPREF0868_1372 NC_013895.2 377148 378449 R identified by match to protein family HMM PF01420; type I restriction modification DNA specificity domain-containing protein complement(377148..378449) Clostridiales genomosp. BVAB3 str. UPII9-5 8811500 YP_003475629.1 CDS HMPREF0868_1371 NC_013895.2 378446 379537 R hypothetical protein complement(378446..379537) Clostridiales genomosp. BVAB3 str. UPII9-5 8810430 YP_003475628.1 CDS hsdM NC_013895.2 379537 381105 R identified by match to protein family HMM PF02384; match to protein family HMM TIGR00497; type I restriction-modification system subunit M complement(379537..381105) Clostridiales genomosp. BVAB3 str. UPII9-5 8811522 YP_003933628.1 CDS HMPREF0868_1652 NC_013895.2 381823 382200 R hypothetical protein complement(381823..382200) Clostridiales genomosp. BVAB3 str. UPII9-5 9829211 YP_003475627.1 CDS HMPREF0868_1367 NC_013895.2 382244 382522 D hypothetical protein 382244..382522 Clostridiales genomosp. BVAB3 str. UPII9-5 8811339 YP_003475626.1 CDS HMPREF0868_1366 NC_013895.2 382960 384354 D hypothetical protein 382960..384354 Clostridiales genomosp. BVAB3 str. UPII9-5 8810465 YP_003475625.1 CDS HMPREF0868_1365 NC_013895.2 384478 385203 D hypothetical protein 384478..385203 Clostridiales genomosp. BVAB3 str. UPII9-5 8810939 YP_003475624.1 CDS HMPREF0868_1364 NC_013895.2 385288 385935 D identified by match to protein family HMM PF01569; PAP2 family protein 385288..385935 Clostridiales genomosp. BVAB3 str. UPII9-5 8810633 YP_003475623.1 CDS HMPREF0868_1363 NC_013895.2 386242 387165 R identified by match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF07992; putative thioredoxin-disulfide reductase complement(386242..387165) Clostridiales genomosp. BVAB3 str. UPII9-5 8810118 YP_003475622.1 CDS HMPREF0868_1362 NC_013895.2 387445 388719 R hypothetical protein complement(387445..388719) Clostridiales genomosp. BVAB3 str. UPII9-5 8811039 YP_003475621.1 CDS HMPREF0868_1361 NC_013895.2 388716 390326 R hypothetical protein complement(388716..390326) Clostridiales genomosp. BVAB3 str. UPII9-5 8810176 YP_003475620.1 CDS HMPREF0868_1360 NC_013895.2 390339 390935 R identified by match to protein family HMM PF01475; Fur family transcriptional regulator complement(390339..390935) Clostridiales genomosp. BVAB3 str. UPII9-5 8811283 YP_003475619.1 CDS HMPREF0868_1359 NC_013895.2 390950 391807 R identified by match to protein family HMM PF00950; ABC 3 transport family protein complement(390950..391807) Clostridiales genomosp. BVAB3 str. UPII9-5 8810221 YP_003475618.1 CDS HMPREF0868_1358 NC_013895.2 391807 392781 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(391807..392781) Clostridiales genomosp. BVAB3 str. UPII9-5 8811094 YP_003475617.1 CDS prfC NC_013895.2 392768 394372 R identified by match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR00503; peptide chain release factor 3 complement(392768..394372) Clostridiales genomosp. BVAB3 str. UPII9-5 8809987 YP_003475616.1 CDS HMPREF0868_1356 NC_013895.2 394566 395201 D hypothetical protein 394566..395201 Clostridiales genomosp. BVAB3 str. UPII9-5 8810791 YP_003475615.1 CDS HMPREF0868_1355 NC_013895.2 395323 396048 D identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033; YebC/PmpR family DNA-binding regulatory protein 395323..396048 Clostridiales genomosp. BVAB3 str. UPII9-5 8810173 YP_003475614.1 CDS HMPREF0868_1354 NC_013895.2 396091 397308 D hypothetical protein 396091..397308 Clostridiales genomosp. BVAB3 str. UPII9-5 8811396 YP_003475613.1 CDS HMPREF0868_1353 NC_013895.2 397301 397699 D hypothetical protein 397301..397699 Clostridiales genomosp. BVAB3 str. UPII9-5 8809972 YP_003475612.1 CDS HMPREF0868_1352 NC_013895.2 397699 398043 D hypothetical protein 397699..398043 Clostridiales genomosp. BVAB3 str. UPII9-5 8811146 YP_003475611.1 CDS HMPREF0868_1351 NC_013895.2 398085 398930 R identified by match to protein family HMM PF02683; cytochrome C biogenesis protein transmembrane region complement(398085..398930) Clostridiales genomosp. BVAB3 str. UPII9-5 8810661 YP_003475610.1 CDS HMPREF0868_1350 NC_013895.2 398930 399553 R identified by match to protein family HMM PF00578; match to protein family HMM PF08534; AhpC/TSA family antioxidant complement(398930..399553) Clostridiales genomosp. BVAB3 str. UPII9-5 8810156 YP_003475609.1 CDS trxA NC_013895.2 399614 399928 R identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; thioredoxin complement(399614..399928) Clostridiales genomosp. BVAB3 str. UPII9-5 8811097 YP_003475608.1 CDS HMPREF0868_1348 NC_013895.2 400198 400680 D putative lipoprotein 400198..400680 Clostridiales genomosp. BVAB3 str. UPII9-5 8811450 YP_003475607.1 CDS HMPREF0868_1347 NC_013895.2 400687 402210 D identified by match to protein family HMM PF01970; integral membrane protein 400687..402210 Clostridiales genomosp. BVAB3 str. UPII9-5 8810897 YP_003475606.1 CDS HMPREF0868_1346 NC_013895.2 402254 403195 R identified by match to protein family HMM PF02557; serine-type D-Ala-D-Ala carboxypeptidase complement(402254..403195) Clostridiales genomosp. BVAB3 str. UPII9-5 8810718 YP_003475605.1 CDS HMPREF0868_1345 NC_013895.2 403417 405333 D identified by match to protein family HMM PF01476; LysM domain-containing protein 403417..405333 Clostridiales genomosp. BVAB3 str. UPII9-5 8811182 YP_003475604.1 CDS alaS NC_013895.2 405446 408106 D identified by match to protein family HMM PF01411; match to protein family HMM PF02272; match to protein family HMM PF07973; match to protein family HMM TIGR00344; alanine--tRNA ligase 405446..408106 Clostridiales genomosp. BVAB3 str. UPII9-5 8810760 YP_003933629.1 CDS HMPREF0868_1343 NC_013895.2 408253 408396 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 408253..408396 Clostridiales genomosp. BVAB3 str. UPII9-5 8811410 YP_003933630.1 CDS HMPREF0868_1342 NC_013895.2 408393 409403 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766; transposase, IS605 OrfB family protein 408393..409403 Clostridiales genomosp. BVAB3 str. UPII9-5 8810330 YP_003475603.1 CDS HMPREF0868_1341 NC_013895.2 409597 409938 D identified by match to protein family HMM PF01230; histidine triad domain-containing protein 409597..409938 Clostridiales genomosp. BVAB3 str. UPII9-5 8810751 YP_003475602.1 CDS HMPREF0868_1340 NC_013895.2 409969 411216 D identified by match to protein family HMM PF03051; putative aminopeptidase E 409969..411216 Clostridiales genomosp. BVAB3 str. UPII9-5 8810498 YP_003475601.1 CDS rpsU NC_013895.2 411483 411656 D identified by match to protein family HMM PF01165; match to protein family HMM TIGR00030; 30S ribosomal protein S21 411483..411656 Clostridiales genomosp. BVAB3 str. UPII9-5 8810575 YP_003475600.1 CDS recJ NC_013895.2 411838 413994 D identified by match to protein family HMM PF01368; match to protein family HMM PF02272; match to protein family HMM TIGR00644; single-stranded-DNA-specific exonuclease RecJ 411838..413994 Clostridiales genomosp. BVAB3 str. UPII9-5 8811023 YP_003475599.1 CDS HMPREF0868_1337 NC_013895.2 413999 416314 D identified by match to protein family HMM PF01842; match to protein family HMM PF01966; match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691; putative GTP diphosphokinase 413999..416314 Clostridiales genomosp. BVAB3 str. UPII9-5 8810690 YP_003475598.1 CDS HMPREF0868_1336 NC_013895.2 416375 416815 D identified by match to protein family HMM PF00583; GNAT family acetyltransferase 416375..416815 Clostridiales genomosp. BVAB3 str. UPII9-5 8811417 YP_003933631.1 CDS HMPREF0868_1335 NC_013895.2 416917 417105 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(416917..417105) Clostridiales genomosp. BVAB3 str. UPII9-5 8811421 YP_003475597.1 CDS HMPREF0868_1334 NC_013895.2 417298 417414 D hypothetical protein 417298..417414 Clostridiales genomosp. BVAB3 str. UPII9-5 8810594 YP_003475596.1 CDS HMPREF0868_1333 NC_013895.2 417514 417675 R hypothetical protein complement(417514..417675) Clostridiales genomosp. BVAB3 str. UPII9-5 8810842 YP_003475595.1 CDS metW NC_013895.2 417700 418383 D identified by match to protein family HMM PF07021; match to protein family HMM PF08241; match to protein family HMM PF08242; methionine biosynthesis protein MetW 417700..418383 Clostridiales genomosp. BVAB3 str. UPII9-5 8810008 YP_003475594.1 CDS HMPREF0868_1331 NC_013895.2 418380 418889 D identified by match to protein family HMM PF00583; GNAT family acetyltransferase 418380..418889 Clostridiales genomosp. BVAB3 str. UPII9-5 8811048 YP_003475593.1 CDS HMPREF0868_1330 NC_013895.2 418901 419269 D hypothetical protein 418901..419269 Clostridiales genomosp. BVAB3 str. UPII9-5 8810298 YP_003933632.1 CDS HMPREF0868_1329 NC_013895.2 419369 419590 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; hypothetical protein complement(419369..419590) Clostridiales genomosp. BVAB3 str. UPII9-5 8811234 YP_003475592.1 CDS HMPREF0868_1328 NC_013895.2 419606 422059 R identified by match to protein family HMM PF00753; match to protein family HMM PF07521; putative ribonuclease J 1 complement(419606..422059) Clostridiales genomosp. BVAB3 str. UPII9-5 8809966 YP_003475591.1 CDS HMPREF0868_1325 NC_013895.2 422392 423228 D identified by match to protein family HMM PF00175; ferredoxin--NADP+ reductase subunit alpha 422392..423228 Clostridiales genomosp. BVAB3 str. UPII9-5 8811081 YP_003475590.1 CDS gltA NC_013895.2 423282 424685 D identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01316; glutamate synthase 423282..424685 Clostridiales genomosp. BVAB3 str. UPII9-5 8810162 YP_003475589.1 CDS HMPREF0868_1323 NC_013895.2 425163 426704 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 425163..426704 Clostridiales genomosp. BVAB3 str. UPII9-5 8810463 YP_003475588.1 CDS HMPREF0868_1322 NC_013895.2 426701 426844 D hypothetical protein 426701..426844 Clostridiales genomosp. BVAB3 str. UPII9-5 8811082 YP_003475587.1 CDS rpsT NC_013895.2 426985 427245 D identified by match to protein family HMM PF01649; match to protein family HMM TIGR00029; 30S ribosomal protein S20 426985..427245 Clostridiales genomosp. BVAB3 str. UPII9-5 8810609 YP_003475586.1 CDS HMPREF0868_1320 NC_013895.2 427355 428281 D hypothetical protein 427355..428281 Clostridiales genomosp. BVAB3 str. UPII9-5 8811251 YP_003475585.1 CDS tyrS NC_013895.2 428375 429649 R identified by match to protein family HMM PF00579; match to protein family HMM TIGR00234; tyrosine--tRNA ligase complement(428375..429649) Clostridiales genomosp. BVAB3 str. UPII9-5 8811167 YP_003475584.1 CDS HMPREF0868_1318 NC_013895.2 429748 431073 R identified by match to protein family HMM PF05636; hypothetical protein complement(429748..431073) Clostridiales genomosp. BVAB3 str. UPII9-5 8810591 YP_003475583.1 CDS pta NC_013895.2 431456 432448 D identified by match to protein family HMM PF01515; match to protein family HMM TIGR00651; phosphate acetyltransferase 431456..432448 Clostridiales genomosp. BVAB3 str. UPII9-5 8810100 YP_003475582.1 CDS ackA NC_013895.2 432549 433748 D identified by match to protein family HMM PF00871; match to protein family HMM TIGR00016; acetate kinase 432549..433748 Clostridiales genomosp. BVAB3 str. UPII9-5 8810800 YP_003475581.1 CDS infC NC_013895.2 434007 434594 D identified by match to protein family HMM PF00707; match to protein family HMM PF05198; match to protein family HMM TIGR00168; translation initiation factor IF-3 434007..434594 Clostridiales genomosp. BVAB3 str. UPII9-5 8810435 YP_003475580.1 CDS rpmI NC_013895.2 434617 434814 D identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001; 50S ribosomal protein L35 434617..434814 Clostridiales genomosp. BVAB3 str. UPII9-5 8810164 YP_003475579.1 CDS rplT NC_013895.2 434845 435201 D identified by match to protein family HMM PF00453; match to protein family HMM TIGR01032; 50S ribosomal protein L20 434845..435201 Clostridiales genomosp. BVAB3 str. UPII9-5 8811070 YP_003475578.1 CDS HMPREF0868_1312 NC_013895.2 435301 436104 D identified by match to protein family HMM PF00588; TrmH family RNA methyltransferase 435301..436104 Clostridiales genomosp. BVAB3 str. UPII9-5 8811545 YP_003475577.1 CDS uvrA NC_013895.2 436421 439303 D identified by match to protein family HMM PF00005; match to protein family HMM TIGR00630; excinuclease ABC subunit A 436421..439303 Clostridiales genomosp. BVAB3 str. UPII9-5 8810306 YP_003475576.1 CDS HMPREF0868_1309 NC_013895.2 439423 442260 D identified by match to protein family HMM PF00004; match to protein family HMM PF07724; match to protein family HMM PF07728; putative negative regulator of genetic competence ClpC/MecB 439423..442260 Clostridiales genomosp. BVAB3 str. UPII9-5 8810962 YP_003475575.1 CDS HMPREF0868_1308 NC_013895.2 442257 443030 D hypothetical protein 442257..443030 Clostridiales genomosp. BVAB3 str. UPII9-5 8810789 YP_003475574.1 CDS HMPREF0868_1307 NC_013895.2 443030 445603 D identified by match to protein family HMM PF01136; U32 family peptidase 443030..445603 Clostridiales genomosp. BVAB3 str. UPII9-5 8810063 YP_003475573.1 CDS dut NC_013895.2 445698 446195 D identified by match to protein family HMM PF00692; match to protein family HMM TIGR00576; dUTP diphosphatase 445698..446195 Clostridiales genomosp. BVAB3 str. UPII9-5 8810886 YP_003475572.1 CDS HMPREF0868_1305 NC_013895.2 446199 447254 D identified by match to protein family HMM PF00814; match to protein family HMM TIGR00329; match to protein family HMM TIGR03723; putative glycoprotease GCP 446199..447254 Clostridiales genomosp. BVAB3 str. UPII9-5 8811467 YP_003475571.1 CDS smpB NC_013895.2 447256 447723 D identified by match to protein family HMM PF01668; match to protein family HMM TIGR00086; SsrA-binding protein 447256..447723 Clostridiales genomosp. BVAB3 str. UPII9-5 8810562 YP_003475570.1 CDS tig NC_013895.2 447875 449173 D identified by match to protein family HMM PF00254; match to protein family HMM PF05697; match to protein family HMM PF05698; match to protein family HMM TIGR00115; trigger factor 447875..449173 Clostridiales genomosp. BVAB3 str. UPII9-5 8811269 YP_003475569.1 CDS clpP NC_013895.2 449259 449843 D identified by match to protein family HMM PF00574; endopeptidase Clp 449259..449843 Clostridiales genomosp. BVAB3 str. UPII9-5 8810340 YP_003475568.1 CDS clpX NC_013895.2 449846 451168 D identified by match to protein family HMM PF00004; match to protein family HMM PF06689; match to protein family HMM PF07724; match to protein family HMM TIGR00382; ATP-dependent Clp protease ATP-binding subunit ClpX 449846..451168 Clostridiales genomosp. BVAB3 str. UPII9-5 8811074 YP_003475567.1 CDS HMPREF0868_1300 NC_013895.2 451349 451630 D hypothetical protein 451349..451630 Clostridiales genomosp. BVAB3 str. UPII9-5 8810233 YP_003475566.1 CDS HMPREF0868_1299 NC_013895.2 451896 452858 D identified by match to protein family HMM PF00165; AraC family transcriptional regulator 451896..452858 Clostridiales genomosp. BVAB3 str. UPII9-5 8810983 YP_003475565.1 CDS HMPREF0868_1298 NC_013895.2 452876 453943 D identified by match to protein family HMM PF00288; putative 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 452876..453943 Clostridiales genomosp. BVAB3 str. UPII9-5 8810608 YP_003475564.1 CDS rpmH NC_013895.2 454009 454146 D identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; 50S ribosomal protein L34 454009..454146 Clostridiales genomosp. BVAB3 str. UPII9-5 8811373 YP_003475563.1 CDS rnpA NC_013895.2 454200 454586 D identified by match to protein family HMM PF00825; match to protein family HMM TIGR00188; ribonuclease P protein component 454200..454586 Clostridiales genomosp. BVAB3 str. UPII9-5 8810491 YP_003475562.1 CDS HMPREF0868_1295 NC_013895.2 454583 454792 D identified by match to protein family HMM PF01809; match to protein family HMM TIGR00278; hypothetical protein 454583..454792 Clostridiales genomosp. BVAB3 str. UPII9-5 8810837 YP_003475561.1 CDS HMPREF0868_1294 NC_013895.2 454805 455770 D identified by match to protein family HMM PF02096; match to protein family HMM TIGR03592; YidC/Oxa1 family membrane protein insertase 454805..455770 Clostridiales genomosp. BVAB3 str. UPII9-5 8809944 YP_003475560.1 CDS HMPREF0868_1293 NC_013895.2 455788 456474 D identified by match to protein family HMM PF01424; R3H domain-containing protein 455788..456474 Clostridiales genomosp. BVAB3 str. UPII9-5 8811017 YP_003475559.1 CDS trmE NC_013895.2 456467 457921 D identified by match to protein family HMM PF01926; match to protein family HMM TIGR00231; match to protein family HMM TIGR00450; tRNA modification GTPase TrmE 456467..457921 Clostridiales genomosp. BVAB3 str. UPII9-5 8811311 YP_003475558.1 CDS gidA NC_013895.2 457952 459928 D identified by match to protein family HMM PF01134; match to protein family HMM PF07992; match to protein family HMM TIGR00136; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 457952..459928 Clostridiales genomosp. BVAB3 str. UPII9-5 8811264 YP_003475557.1 CDS gidB NC_013895.2 459925 460716 D identified by match to protein family HMM PF02527; match to protein family HMM TIGR00138; 16S rRNA methyltransferase GidB 459925..460716 Clostridiales genomosp. BVAB3 str. UPII9-5 8810377 YP_003475556.1 CDS gyrA NC_013895.2 460820 463423 D identified by match to protein family HMM PF00521; match to protein family HMM PF03989; match to protein family HMM TIGR01063; DNA gyrase subunit A 460820..463423 Clostridiales genomosp. BVAB3 str. UPII9-5 8811096 YP_003475555.1 CDS HMPREF0868_1288 NC_013895.2 463517 464626 R hypothetical protein complement(463517..464626) Clostridiales genomosp. BVAB3 str. UPII9-5 8811563 YP_003475554.1 CDS phoP NC_013895.2 470486 471196 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; alkaline phosphatase synthesis transcriptional regulatory protein PhoP 470486..471196 Clostridiales genomosp. BVAB3 str. UPII9-5 8810410 YP_003475553.1 CDS HMPREF0868_1281 NC_013895.2 471206 473182 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; ATPase/histidine kinase/DNA gyrase B/HSP90 domain-containing protein 471206..473182 Clostridiales genomosp. BVAB3 str. UPII9-5 8811343 YP_003475552.1 CDS murA NC_013895.2 473244 474521 D identified by match to protein family HMM PF00275; match to protein family HMM TIGR01072; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 473244..474521 Clostridiales genomosp. BVAB3 str. UPII9-5 8811178 YP_003475551.1 CDS HMPREF0868_1279 NC_013895.2 474528 475349 D identified by match to protein family HMM PF00753; metallo-beta-lactamase domain-containing protein 474528..475349 Clostridiales genomosp. BVAB3 str. UPII9-5 8810411 YP_003475550.1 CDS HMPREF0868_1278 NC_013895.2 475339 475803 D identified by match to protein family HMM PF02590; putative rRNA large subunit m3Psi methyltransferase RlmH 475339..475803 Clostridiales genomosp. BVAB3 str. UPII9-5 8810333 YP_003475549.1 CDS secE NC_013895.2 476175 476531 D identified by match to protein family HMM PF00584; match to protein family HMM TIGR00964; preprotein translocase subunit SecE 476175..476531 Clostridiales genomosp. BVAB3 str. UPII9-5 8810840 YP_003475548.1 CDS nusG NC_013895.2 476528 477070 D identified by match to protein family HMM PF00467; match to protein family HMM PF02357; match to protein family HMM TIGR00922; transcription termination/antitermination factor NusG 476528..477070 Clostridiales genomosp. BVAB3 str. UPII9-5 8811472 YP_003475547.1 CDS rplK NC_013895.2 477127 477552 D identified by match to protein family HMM PF00298; match to protein family HMM PF03946; match to protein family HMM TIGR01632; 50S ribosomal protein L11 477127..477552 Clostridiales genomosp. BVAB3 str. UPII9-5 8810242 YP_003475546.1 CDS rplA NC_013895.2 477564 478259 D identified by match to protein family HMM PF00687; match to protein family HMM TIGR01169; 50S ribosomal protein L1 477564..478259 Clostridiales genomosp. BVAB3 str. UPII9-5 8810682 YP_003475545.1 CDS rplJ NC_013895.2 478410 478955 D identified by match to protein family HMM PF00466; 50S ribosomal protein L10 478410..478955 Clostridiales genomosp. BVAB3 str. UPII9-5 8811405 YP_003475544.1 CDS rplL NC_013895.2 478984 479361 D identified by match to protein family HMM PF00542; match to protein family HMM TIGR00855; 50S ribosomal protein L7/L12 478984..479361 Clostridiales genomosp. BVAB3 str. UPII9-5 8810181 YP_003475543.1 CDS HMPREF0868_1271 NC_013895.2 479560 479673 D hypothetical protein 479560..479673 Clostridiales genomosp. BVAB3 str. UPII9-5 8810443 YP_003475542.1 CDS HMPREF0868_1270 NC_013895.2 479738 480373 D hypothetical protein 479738..480373 Clostridiales genomosp. BVAB3 str. UPII9-5 8811555 YP_003475540.1 CDS hprK NC_013895.2 481164 482096 D identified by match to protein family HMM PF02603; match to protein family HMM PF07475; match to protein family HMM TIGR00679; HPr(Ser) kinase/phosphatase 481164..482096 Clostridiales genomosp. BVAB3 str. UPII9-5 8811375 YP_003475539.1 CDS murB NC_013895.2 482089 483102 D identified by match to protein family HMM PF01565; match to protein family HMM PF02873; match to protein family HMM TIGR00179; UDP-N-acetylmuramate dehydrogenase 482089..483102 Clostridiales genomosp. BVAB3 str. UPII9-5 8810705 YP_003475538.1 CDS HMPREF0868_1262 NC_013895.2 483130 484110 D identified by match to protein family HMM PF03668; hypothetical protein 483130..484110 Clostridiales genomosp. BVAB3 str. UPII9-5 8811077 YP_003475537.1 CDS HMPREF0868_1261 NC_013895.2 484103 485005 D identified by match to protein family HMM PF02650; match to protein family HMM TIGR00647; hypothetical protein 484103..485005 Clostridiales genomosp. BVAB3 str. UPII9-5 8810121 YP_003475536.1 CDS HMPREF0868_1260 NC_013895.2 485009 485839 D identified by match to protein family HMM PF00325; Crp/Fnr family transcriptional regulator 485009..485839 Clostridiales genomosp. BVAB3 str. UPII9-5 8810216 YP_003475535.1 CDS serS NC_013895.2 485904 487202 D identified by match to protein family HMM PF00587; match to protein family HMM PF02403; match to protein family HMM TIGR00414; serine--tRNA ligase 485904..487202 Clostridiales genomosp. BVAB3 str. UPII9-5 8810888 YP_003475534.1 CDS HMPREF0868_1258 NC_013895.2 487204 488583 D identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein 487204..488583 Clostridiales genomosp. BVAB3 str. UPII9-5 8809989 YP_003475533.1 CDS pepT NC_013895.2 488648 489898 D identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01882; peptidase T 488648..489898 Clostridiales genomosp. BVAB3 str. UPII9-5 8810811 YP_003475532.1 CDS HMPREF0868_1256 NC_013895.2 489981 490853 D hypothetical protein 489981..490853 Clostridiales genomosp. BVAB3 str. UPII9-5 8811399 YP_003475531.1 CDS HMPREF0868_1255 NC_013895.2 491042 491491 R hypothetical protein complement(491042..491491) Clostridiales genomosp. BVAB3 str. UPII9-5 8810723 YP_003475530.1 CDS HMPREF0868_1254 NC_013895.2 491479 492279 R identified by match to protein family HMM PF06738; hypothetical protein complement(491479..492279) Clostridiales genomosp. BVAB3 str. UPII9-5 8811171 YP_003475529.1 CDS HMPREF0868_1253 NC_013895.2 492754 495108 D hypothetical protein 492754..495108 Clostridiales genomosp. BVAB3 str. UPII9-5 8810534 YP_003475528.1 CDS HMPREF0868_1252 NC_013895.2 495099 499547 D hypothetical protein 495099..499547 Clostridiales genomosp. BVAB3 str. UPII9-5 8810850 YP_003475527.1 CDS HMPREF0868_1251 NC_013895.2 499572 500633 D hypothetical protein 499572..500633 Clostridiales genomosp. BVAB3 str. UPII9-5 8810346 YP_003475526.1 CDS HMPREF0868_1250 NC_013895.2 500940 502415 D identified by match to protein family HMM PF09479; hypothetical protein 500940..502415 Clostridiales genomosp. BVAB3 str. UPII9-5 8810993 YP_003475525.1 CDS HMPREF0868_1249 NC_013895.2 502420 502560 D hypothetical protein 502420..502560 Clostridiales genomosp. BVAB3 str. UPII9-5 8810092 YP_003475524.1 CDS rpsL NC_013895.2 502611 503039 D identified by match to protein family HMM PF00164; match to protein family HMM TIGR00981; 30S ribosomal protein S12 502611..503039 Clostridiales genomosp. BVAB3 str. UPII9-5 8811177 YP_003475523.1 CDS rpsG NC_013895.2 503183 503653 D identified by match to protein family HMM PF00177; match to protein family HMM TIGR01029; 30S ribosomal protein S7 503183..503653 Clostridiales genomosp. BVAB3 str. UPII9-5 8810662 YP_003475522.1 CDS fusA NC_013895.2 503674 505740 D identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM PF03764; match to protein family HMM TIGR00231; match to protein family HMM TIGR00484; translation elongation factor G 503674..505740 Clostridiales genomosp. BVAB3 str. UPII9-5 8810286 YP_003475521.1 CDS tuf NC_013895.2 505875 507074 D identified by match to protein family HMM PF00009; match to protein family HMM PF03143; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR00485; translation elongation factor Tu 505875..507074 Clostridiales genomosp. BVAB3 str. UPII9-5 8810829 YP_003475520.1 CDS lon NC_013895.2 507234 509753 D identified by match to protein family HMM PF00004; match to protein family HMM PF05362; match to protein family HMM PF07728; match to protein family HMM TIGR00763; endopeptidase La 507234..509753 Clostridiales genomosp. BVAB3 str. UPII9-5 8810123 YP_003475519.1 CDS HMPREF0868_1243 NC_013895.2 509740 510387 D identified by match to protein family HMM PF01205; hypothetical protein 509740..510387 Clostridiales genomosp. BVAB3 str. UPII9-5 8811403 YP_003475518.1 CDS HMPREF0868_1242 NC_013895.2 510392 511165 D identified by match to protein family HMM PF01936; hypothetical protein 510392..511165 Clostridiales genomosp. BVAB3 str. UPII9-5 8810725 YP_003475517.1 CDS malQ NC_013895.2 511232 512755 D identified by match to protein family HMM PF02446; match to protein family HMM TIGR00217; 4-alpha-glucanotransferase 511232..512755 Clostridiales genomosp. BVAB3 str. UPII9-5 8810022 YP_003475516.1 CDS efp NC_013895.2 512823 513380 D identified by match to protein family HMM PF01132; match to protein family HMM PF08207; match to protein family HMM PF09285; match to protein family HMM TIGR00038; translation elongation factor P 512823..513380 Clostridiales genomosp. BVAB3 str. UPII9-5 8810183 YP_003475515.1 CDS HMPREF0868_1239 NC_013895.2 513389 513766 D identified by match to protein family HMM PF03780; hypothetical protein 513389..513766 Clostridiales genomosp. BVAB3 str. UPII9-5 8810926 YP_003475514.1 CDS HMPREF0868_1238 NC_013895.2 513759 514307 D hypothetical protein 513759..514307 Clostridiales genomosp. BVAB3 str. UPII9-5 8810035 YP_003475513.1 CDS HMPREF0868_1237 NC_013895.2 514304 514543 D hypothetical protein 514304..514543 Clostridiales genomosp. BVAB3 str. UPII9-5 8810919 YP_003475512.1 CDS nusB NC_013895.2 514555 515010 D identified by match to protein family HMM PF01029; match to protein family HMM TIGR01951; transcription antitermination factor NusB 514555..515010 Clostridiales genomosp. BVAB3 str. UPII9-5 8810651 YP_003475511.1 CDS xseA NC_013895.2 515010 516344 D identified by match to protein family HMM PF01336; match to protein family HMM PF02601; match to protein family HMM TIGR00237; exodeoxyribonuclease VII large subunit 515010..516344 Clostridiales genomosp. BVAB3 str. UPII9-5 8811383 YP_003475510.1 CDS xseB NC_013895.2 516337 516633 D identified by match to protein family HMM PF02609; match to protein family HMM TIGR01280; exodeoxyribonuclease VII small subunit 516337..516633 Clostridiales genomosp. BVAB3 str. UPII9-5 8810531 YP_003475509.1 CDS HMPREF0868_1233 NC_013895.2 516617 517627 D identified by match to protein family HMM PF00348; geranyltranstransferase family protein 516617..517627 Clostridiales genomosp. BVAB3 str. UPII9-5 8811210 YP_003475508.1 CDS dxs NC_013895.2 517632 519725 D identified by match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00204; 1-deoxy-D-xylulose-5-phosphate synthase 517632..519725 Clostridiales genomosp. BVAB3 str. UPII9-5 8810517 YP_003475507.1 CDS HMPREF0868_1231 NC_013895.2 519700 520551 D identified by match to protein family HMM PF01513; NAD(+)/NADH kinase 519700..520551 Clostridiales genomosp. BVAB3 str. UPII9-5 8810676 YP_003475506.1 CDS recN NC_013895.2 520569 522299 D identified by match to protein family HMM PF02463; match to protein family HMM TIGR00634; DNA repair protein RecN 520569..522299 Clostridiales genomosp. BVAB3 str. UPII9-5 8809974 YP_003475505.1 CDS HMPREF0868_1228 NC_013895.2 522545 523300 D identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase family oxidoreductase 522545..523300 Clostridiales genomosp. BVAB3 str. UPII9-5 8810418 YP_003475504.1 CDS HMPREF0868_1227 NC_013895.2 523362 524426 R identified by match to protein family HMM PF00849; RluA family pseudouridine synthase complement(523362..524426) Clostridiales genomosp. BVAB3 str. UPII9-5 8810068 YP_003475503.1 CDS HMPREF0868_1226 NC_013895.2 524916 525608 D hypothetical protein 524916..525608 Clostridiales genomosp. BVAB3 str. UPII9-5 8810677 YP_003475502.1 CDS HMPREF0868_1225 NC_013895.2 525945 526328 R hypothetical protein complement(525945..526328) Clostridiales genomosp. BVAB3 str. UPII9-5 8810299 YP_003475501.1 CDS HMPREF0868_1224 NC_013895.2 526341 527867 R hypothetical protein complement(526341..527867) Clostridiales genomosp. BVAB3 str. UPII9-5 8810975 YP_003475500.1 CDS HMPREF0868_1223 NC_013895.2 527879 530515 R identified by match to protein family HMM PF04851; type III restriction enzyme, res subunit complement(527879..530515) Clostridiales genomosp. BVAB3 str. UPII9-5 8811128 YP_003475499.1 CDS HMPREF0868_1222 NC_013895.2 530519 532417 R identified by match to protein family HMM PF01555; DNA (cytosine-5-)-methyltransferase complement(530519..532417) Clostridiales genomosp. BVAB3 str. UPII9-5 8810273 YP_003475498.1 CDS HMPREF0868_1221 NC_013895.2 533018 533785 D hypothetical protein 533018..533785 Clostridiales genomosp. BVAB3 str. UPII9-5 8810515 YP_003475497.1 CDS HMPREF0868_1220 NC_013895.2 534550 535209 D identified by match to protein family HMM PF00436; single-strand binding family protein 534550..535209 Clostridiales genomosp. BVAB3 str. UPII9-5 8810246 YP_003475496.1 CDS HMPREF0868_1219 NC_013895.2 535352 535558 D identified by match to protein family HMM PF01381; DNA-binding helix-turn-helix protein 535352..535558 Clostridiales genomosp. BVAB3 str. UPII9-5 8810697 YP_003475495.1 CDS HMPREF0868_1218 NC_013895.2 535649 536674 D hypothetical protein 535649..536674 Clostridiales genomosp. BVAB3 str. UPII9-5 8811411 YP_003933633.1 CDS HMPREF0868_1217 NC_013895.2 536674 537564 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; hypothetical protein 536674..537564 Clostridiales genomosp. BVAB3 str. UPII9-5 8810799 YP_003933634.1 CDS HMPREF0868_1216 NC_013895.2 537568 538287 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; hypothetical protein 537568..538287 Clostridiales genomosp. BVAB3 str. UPII9-5 8810683 YP_003475494.1 CDS HMPREF0868_1215 NC_013895.2 538611 538925 D identified by match to protein family HMM PF06125; hypothetical protein 538611..538925 Clostridiales genomosp. BVAB3 str. UPII9-5 8810954 YP_003475493.1 CDS HMPREF0868_1214 NC_013895.2 538941 539327 D identified by match to protein family HMM PF06125; hypothetical protein 538941..539327 Clostridiales genomosp. BVAB3 str. UPII9-5 8810096 YP_003475492.1 CDS HMPREF0868_1213 NC_013895.2 539356 540741 D identified by match to protein family HMM PF01580; FtsK/SpoIIIE family protein 539356..540741 Clostridiales genomosp. BVAB3 str. UPII9-5 8811139 YP_003475491.1 CDS HMPREF0868_1212 NC_013895.2 540919 542124 D identified by match to protein family HMM PF01381; match to protein family HMM PF02486; DNA-binding helix-turn-helix protein 540919..542124 Clostridiales genomosp. BVAB3 str. UPII9-5 8811033 YP_003475490.1 CDS HMPREF0868_1211 NC_013895.2 542167 542388 D hypothetical protein 542167..542388 Clostridiales genomosp. BVAB3 str. UPII9-5 8811011 YP_003475489.1 CDS ardA NC_013895.2 542505 542999 D identified by match to protein family HMM PF07275; antirestriction protein 542505..542999 Clostridiales genomosp. BVAB3 str. UPII9-5 8810188 YP_003475488.1 CDS HMPREF0868_1209 NC_013895.2 542974 543480 D hypothetical protein 542974..543480 Clostridiales genomosp. BVAB3 str. UPII9-5 8811274 YP_003933635.1 CDS HMPREF0868_1208 NC_013895.2 543464 544579 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 543464..544579 Clostridiales genomosp. BVAB3 str. UPII9-5 8810433 YP_003933636.1 CDS HMPREF0868_1207 NC_013895.2 544576 545910 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; ATP/GTP-binding family protein 544576..545910 Clostridiales genomosp. BVAB3 str. UPII9-5 8810736 YP_003475487.1 CDS HMPREF0868_1206 NC_013895.2 545913 548090 D hypothetical protein 545913..548090 Clostridiales genomosp. BVAB3 str. UPII9-5 8811224 YP_003475486.1 CDS HMPREF0868_1205 NC_013895.2 548087 549088 D identified by match to protein family HMM PF00877; NlpC/P60 family protein 548087..549088 Clostridiales genomosp. BVAB3 str. UPII9-5 8810518 YP_003475485.1 CDS HMPREF0868_1204 NC_013895.2 549103 550020 D hypothetical protein 549103..550020 Clostridiales genomosp. BVAB3 str. UPII9-5 8810251 YP_003475484.1 CDS HMPREF0868_1203 NC_013895.2 550265 550381 D identified by match to protein family HMM PF08076; tetracycline resistance determinant leader peptide 550265..550381 Clostridiales genomosp. BVAB3 str. UPII9-5 8810240 YP_003475483.1 CDS HMPREF0868_1202 NC_013895.2 550397 552316 D identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM PF03764; match to protein family HMM TIGR00231; putative translation elongation factor G 550397..552316 Clostridiales genomosp. BVAB3 str. UPII9-5 8810996 YP_003475482.1 CDS HMPREF0868_1201 NC_013895.2 552662 553015 R identified by match to protein family HMM PF01381; DNA-binding helix-turn-helix protein complement(552662..553015) Clostridiales genomosp. BVAB3 str. UPII9-5 8811429 YP_003475481.1 CDS HMPREF0868_1200 NC_013895.2 553520 553942 D identified by match to protein family HMM PF04545; match to protein family HMM PF08281; sigma-70, region 4 553520..553942 Clostridiales genomosp. BVAB3 str. UPII9-5 8810537 YP_003475480.1 CDS HMPREF0868_1199 NC_013895.2 554233 554361 R hypothetical protein complement(554233..554361) Clostridiales genomosp. BVAB3 str. UPII9-5 8809985 YP_003475479.1 CDS HMPREF0868_1198 NC_013895.2 554630 554833 D identified by match to protein family HMM PF09035; DNA binding domain-containing protein, excisionase family 554630..554833 Clostridiales genomosp. BVAB3 str. UPII9-5 8811505 YP_003933637.1 CDS HMPREF0868_1197 NC_013895.2 555243 556133 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00589; phage integrase family site-specific recombinase 555243..556133 Clostridiales genomosp. BVAB3 str. UPII9-5 8810209 YP_003475478.1 CDS HMPREF0868_1196 NC_013895.2 556418 557749 R identified by match to protein family HMM PF03432; relaxase/mobilization nuclease domain-containing protein complement(556418..557749) Clostridiales genomosp. BVAB3 str. UPII9-5 8810892 YP_003475477.1 CDS HMPREF0868_1195 NC_013895.2 557752 558108 R hypothetical protein complement(557752..558108) Clostridiales genomosp. BVAB3 str. UPII9-5 8811020 YP_003475476.1 CDS HMPREF0868_1194 NC_013895.2 558382 559590 D identified by match to protein family HMM PF00165; AraC family transcriptional regulator 558382..559590 Clostridiales genomosp. BVAB3 str. UPII9-5 8809962 YP_003475475.1 CDS HMPREF0868_1193 NC_013895.2 559636 560616 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(559636..560616) Clostridiales genomosp. BVAB3 str. UPII9-5 8811040 YP_003475474.1 CDS HMPREF0868_1192 NC_013895.2 560703 561401 D identified by match to protein family HMM PF09605; match to protein family HMM TIGR02185; hypothetical protein 560703..561401 Clostridiales genomosp. BVAB3 str. UPII9-5 8810316 YP_003475473.1 CDS HMPREF0868_1191 NC_013895.2 561398 562129 D identified by match to protein family HMM PF02361; cobalt transport protein 561398..562129 Clostridiales genomosp. BVAB3 str. UPII9-5 8810259 YP_003475472.1 CDS HMPREF0868_1190 NC_013895.2 562126 563595 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 562126..563595 Clostridiales genomosp. BVAB3 str. UPII9-5 8810365 YP_003475471.1 CDS HMPREF0868_1189 NC_013895.2 563597 565354 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein 563597..565354 Clostridiales genomosp. BVAB3 str. UPII9-5 8810078 YP_003475470.1 CDS HMPREF0868_1188 NC_013895.2 565354 567063 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 565354..567063 Clostridiales genomosp. BVAB3 str. UPII9-5 8810929 YP_003475469.1 CDS HMPREF0868_1187 NC_013895.2 567075 568232 D identified by match to protein family HMM PF01325; match to protein family HMM PF01554; iron dependent repressor, N-terminal DNA binding domain-containing protein 567075..568232 Clostridiales genomosp. BVAB3 str. UPII9-5 8810027 YP_003475468.1 CDS HMPREF0868_1186 NC_013895.2 568305 568421 D hypothetical protein 568305..568421 Clostridiales genomosp. BVAB3 str. UPII9-5 8811106 YP_003475467.1 CDS HMPREF0868_1185 NC_013895.2 568547 568963 D identified by match to protein family HMM PF04545; sigma-70, region 4 568547..568963 Clostridiales genomosp. BVAB3 str. UPII9-5 8810627 YP_003475466.1 CDS HMPREF0868_1184 NC_013895.2 569552 570382 D identified by match to protein family HMM PF01863; hypothetical protein 569552..570382 Clostridiales genomosp. BVAB3 str. UPII9-5 8810907 YP_003475465.1 CDS noxE NC_013895.2 570555 571901 D identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992; NADH oxidase 570555..571901 Clostridiales genomosp. BVAB3 str. UPII9-5 8810423 YP_003475464.1 CDS HMPREF0868_1182 NC_013895.2 572181 572906 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 572181..572906 Clostridiales genomosp. BVAB3 str. UPII9-5 8811300 YP_003475463.1 CDS HMPREF0868_1181 NC_013895.2 572906 575146 D identified by match to protein family HMM PF02687; efflux ABC transporter permease 572906..575146 Clostridiales genomosp. BVAB3 str. UPII9-5 8811198 YP_003475462.1 CDS HMPREF0868_1180 NC_013895.2 575303 576010 R identified by match to protein family HMM PF00230; putative glycerol uptake facilitator complement(575303..576010) Clostridiales genomosp. BVAB3 str. UPII9-5 8810525 YP_003475461.1 CDS HMPREF0868_1179 NC_013895.2 576131 577408 R hypothetical protein complement(576131..577408) Clostridiales genomosp. BVAB3 str. UPII9-5 8811052 YP_003475460.1 CDS HMPREF0868_1178 NC_013895.2 577612 578265 D identified by match to protein family HMM PF00325; Crp/Fnr family transcriptional regulator 577612..578265 Clostridiales genomosp. BVAB3 str. UPII9-5 8810311 YP_003475459.1 CDS HMPREF0868_1177 NC_013895.2 578327 578677 D identified by match to protein family HMM PF04297; match to protein family HMM PF04545; match to protein family HMM PF08281; sigma-70, region 4 578327..578677 Clostridiales genomosp. BVAB3 str. UPII9-5 8810838 YP_003475458.1 CDS ffh NC_013895.2 578888 580246 D identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM PF02978; match to protein family HMM TIGR00959; signal recognition particle protein 578888..580246 Clostridiales genomosp. BVAB3 str. UPII9-5 8811327 YP_003475457.1 CDS rpsP NC_013895.2 580285 580530 D identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; 30S ribosomal protein S16 580285..580530 Clostridiales genomosp. BVAB3 str. UPII9-5 8811032 YP_003475456.1 CDS HMPREF0868_1174 NC_013895.2 580527 580778 D hypothetical protein 580527..580778 Clostridiales genomosp. BVAB3 str. UPII9-5 8811153 YP_003475455.1 CDS rimM NC_013895.2 580786 581364 D identified by match to protein family HMM PF05239; match to protein family HMM TIGR02273; 16S rRNA processing protein RimM 580786..581364 Clostridiales genomosp. BVAB3 str. UPII9-5 8810445 YP_003475454.1 CDS trmD NC_013895.2 581376 582125 D identified by match to protein family HMM PF01746; match to protein family HMM TIGR00088; tRNA (guanine-N(1)-)-methyltransferase 581376..582125 Clostridiales genomosp. BVAB3 str. UPII9-5 8810654 YP_003475453.1 CDS rplS NC_013895.2 582232 582585 D identified by match to protein family HMM PF01245; match to protein family HMM TIGR01024; 50S ribosomal protein L19 582232..582585 Clostridiales genomosp. BVAB3 str. UPII9-5 8811261 YP_003475452.1 CDS ylqF NC_013895.2 582715 583557 D identified by match to protein family HMM PF01926; match to protein family HMM TIGR03596; ribosome biogenesis GTP-binding protein YlqF 582715..583557 Clostridiales genomosp. BVAB3 str. UPII9-5 8810578 YP_003475451.1 CDS rnhB NC_013895.2 583663 584349 D identified by match to protein family HMM PF01351; ribonuclease HII 583663..584349 Clostridiales genomosp. BVAB3 str. UPII9-5 8810797 YP_003475450.1 CDS HMPREF0868_1168 NC_013895.2 584343 584861 D hypothetical protein 584343..584861 Clostridiales genomosp. BVAB3 str. UPII9-5 8810134 YP_003475449.1 CDS HMPREF0868_1167 NC_013895.2 585029 585784 D identified by match to protein family HMM PF00392; GntR family transcriptional regulator 585029..585784 Clostridiales genomosp. BVAB3 str. UPII9-5 8810211 YP_003475448.1 CDS HMPREF0868_1166 NC_013895.2 585809 586972 D identified by match to protein family HMM PF00266; putative cysteine desulfurase 585809..586972 Clostridiales genomosp. BVAB3 str. UPII9-5 8810532 YP_003475447.1 CDS thiI NC_013895.2 587073 588248 D identified by match to protein family HMM PF02568; match to protein family HMM PF02926; match to protein family HMM PF06508; match to protein family HMM TIGR00342; thiamine biosynthesis/tRNA modification protein ThiI 587073..588248 Clostridiales genomosp. BVAB3 str. UPII9-5 8811187 YP_003475446.1 CDS HMPREF0868_1164 NC_013895.2 588283 589584 D identified by match to protein family HMM PF00004; recombination factor protein RarA 588283..589584 Clostridiales genomosp. BVAB3 str. UPII9-5 8810508 YP_003475445.1 CDS HMPREF0868_1163 NC_013895.2 589577 590728 D identified by match to protein family HMM PF00266; match to protein family HMM PF01212; putative cysteine desulfurase NifS 589577..590728 Clostridiales genomosp. BVAB3 str. UPII9-5 8810548 YP_003475444.1 CDS HMPREF0868_1162 NC_013895.2 590750 591388 D identified by match to protein family HMM PF00657; GDSL-like protein 590750..591388 Clostridiales genomosp. BVAB3 str. UPII9-5 8811490 YP_003475443.1 CDS HMPREF0868_1161 NC_013895.2 591663 592034 D identified by match to protein family HMM PF00165; AraC family transcriptional regulator 591663..592034 Clostridiales genomosp. BVAB3 str. UPII9-5 8811130 YP_003475442.1 CDS HMPREF0868_1160 NC_013895.2 592108 593091 R identified by match to protein family HMM PF00849; putative rRNA pseudouridylate synthase C complement(592108..593091) Clostridiales genomosp. BVAB3 str. UPII9-5 8810533 YP_003475441.1 CDS mtnN NC_013895.2 593275 593964 D identified by match to protein family HMM PF01048; match to protein family HMM TIGR01704; MTA/SAH nucleosidase 593275..593964 Clostridiales genomosp. BVAB3 str. UPII9-5 8810263 YP_003475440.1 CDS HMPREF0868_1158 NC_013895.2 594245 595300 D identified by match to protein family HMM PF00107; match to protein family HMM PF08240; GroES-like protein 594245..595300 Clostridiales genomosp. BVAB3 str. UPII9-5 8811172 YP_003475439.1 CDS HMPREF0868_1157 NC_013895.2 595379 596329 D identified by match to protein family HMM PF02492; CobW/P47K family protein 595379..596329 Clostridiales genomosp. BVAB3 str. UPII9-5 8811521 YP_003475438.1 CDS HMPREF0868_1154 NC_013895.2 596782 598473 D identified by match to protein family HMM PF01432; match to protein family HMM TIGR02289; M3 family oligoendopeptidase 596782..598473 Clostridiales genomosp. BVAB3 str. UPII9-5 8810913 YP_003475437.1 CDS HMPREF0868_1153 NC_013895.2 598474 601533 D identified by match to protein family HMM PF08245; putative UDP-N-acetylmuramoylalanine--D-glutamate ligase 598474..601533 Clostridiales genomosp. BVAB3 str. UPII9-5 8810485 YP_003475436.1 CDS HMPREF0868_1152 NC_013895.2 601607 602323 D identified by match to protein family HMM PF02592; match to protein family HMM TIGR00697; hypothetical protein 601607..602323 Clostridiales genomosp. BVAB3 str. UPII9-5 8811207 YP_003475435.1 CDS rlmN NC_013895.2 602489 603526 D identified by match to protein family HMM PF04055; match to protein family HMM TIGR00048; 23S rRNA m2A2503 methyltransferase 602489..603526 Clostridiales genomosp. BVAB3 str. UPII9-5 8810696 YP_003475434.1 CDS HMPREF0868_1150 NC_013895.2 603529 604260 D identified by match to protein family HMM PF00481; protein phosphatase 2C 603529..604260 Clostridiales genomosp. BVAB3 str. UPII9-5 8811412 YP_003475433.1 CDS HMPREF0868_1149 NC_013895.2 604278 606080 D identified by match to protein family HMM PF00069; match to protein family HMM PF03793; match to protein family HMM PF07714; putative serine/threonine-protein kinase PrkC 604278..606080 Clostridiales genomosp. BVAB3 str. UPII9-5 8810755 YP_003475432.1 CDS rsgA NC_013895.2 606087 607139 D identified by match to protein family HMM PF03193; match to protein family HMM TIGR00157; ribosome small subunit-dependent GTPase A 606087..607139 Clostridiales genomosp. BVAB3 str. UPII9-5 8810131 YP_003475431.1 CDS rpe NC_013895.2 607260 607982 D identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163; ribulose-phosphate 3-epimerase 607260..607982 Clostridiales genomosp. BVAB3 str. UPII9-5 8810949 YP_003475430.1 CDS HMPREF0868_1146 NC_013895.2 608038 608697 D identified by match to protein family HMM PF04263; match to protein family HMM TIGR01378; thiamine diphosphokinase 608038..608697 Clostridiales genomosp. BVAB3 str. UPII9-5 8810241 YP_003475429.1 CDS HMPREF0868_1145 NC_013895.2 608725 610203 D identified by match to protein family HMM PF01551; M23 family peptidase 608725..610203 Clostridiales genomosp. BVAB3 str. UPII9-5 8810830 YP_003475428.1 CDS HMPREF0868_1144 NC_013895.2 610312 610986 D identified by match to protein family HMM PF01987; match to protein family HMM TIGR00266; hypothetical protein 610312..610986 Clostridiales genomosp. BVAB3 str. UPII9-5 8810139 YP_003475427.1 CDS HMPREF0868_1143 NC_013895.2 611423 612580 D identified by match to protein family HMM PF01094; receptor family ligand-binding protein 611423..612580 Clostridiales genomosp. BVAB3 str. UPII9-5 8811006 YP_003475426.1 CDS HMPREF0868_1142 NC_013895.2 612592 613467 D identified by match to protein family HMM PF02653; putative high-affinity branched-chain amino acid ABC transporter permease LivH 612592..613467 Clostridiales genomosp. BVAB3 str. UPII9-5 8810230 YP_003933638.1 CDS HMPREF0868_1141 NC_013895.2 613464 614483 D identified by match to protein family HMM PF02653; branched-chain amino acid ABC transporter permease 613464..614483 Clostridiales genomosp. BVAB3 str. UPII9-5 8811212 YP_003475425.1 CDS HMPREF0868_1140 NC_013895.2 614480 615253 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 614480..615253 Clostridiales genomosp. BVAB3 str. UPII9-5 8810494 YP_003475424.1 CDS livF NC_013895.2 615246 615950 D identified by match to protein family HMM PF00005; high-affinity branched-chain amino acid transport ATP-binding protein LivF 615246..615950 Clostridiales genomosp. BVAB3 str. UPII9-5 8810558 YP_003475423.1 CDS dhaK NC_013895.2 615959 616945 D identified by match to protein family HMM PF02733; match to protein family HMM TIGR02363; dihydroxyacetone kinase subunit DhaK 615959..616945 Clostridiales genomosp. BVAB3 str. UPII9-5 8811134 YP_003475422.1 CDS dhaL NC_013895.2 616946 617596 D identified by match to protein family HMM PF02734; match to protein family HMM TIGR02365; dihydroxyacetone kinase subunit L 616946..617596 Clostridiales genomosp. BVAB3 str. UPII9-5 8811201 YP_003475421.1 CDS HMPREF0868_1136 NC_013895.2 617706 618617 D hypothetical protein 617706..618617 Clostridiales genomosp. BVAB3 str. UPII9-5 8810456 YP_003475420.1 CDS HMPREF0868_1135 NC_013895.2 618643 619653 D hypothetical protein 618643..619653 Clostridiales genomosp. BVAB3 str. UPII9-5 8810159 YP_003475419.1 CDS HMPREF0868_1134 NC_013895.2 619803 620417 R identified by match to protein family HMM PF00392; GntR family transcriptional regulator complement(619803..620417) Clostridiales genomosp. BVAB3 str. UPII9-5 8810906 YP_003475418.1 CDS pfkA NC_013895.2 620650 621645 D identified by match to protein family HMM PF00365; match to protein family HMM TIGR02482; 6-phosphofructokinase 620650..621645 Clostridiales genomosp. BVAB3 str. UPII9-5 8810502 YP_003475417.1 CDS HMPREF0868_1132 NC_013895.2 621664 622218 D identified by match to protein family HMM PF01066; putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 621664..622218 Clostridiales genomosp. BVAB3 str. UPII9-5 8811071 YP_003475416.1 CDS HMPREF0868_1131 NC_013895.2 622433 624892 D identified by match to protein family HMM PF00488; match to protein family HMM PF01713; match to protein family HMM TIGR01069; putative recombination and DNA strand exchange inhibitor protein 622433..624892 Clostridiales genomosp. BVAB3 str. UPII9-5 8810170 YP_003475415.1 CDS HMPREF0868_1130 NC_013895.2 624921 625412 R identified by match to protein family HMM PF00588; TrmH family RNA methyltransferase complement(624921..625412) Clostridiales genomosp. BVAB3 str. UPII9-5 8810978 YP_003475414.1 CDS HMPREF0868_1129 NC_013895.2 625537 626130 D hypothetical protein 625537..626130 Clostridiales genomosp. BVAB3 str. UPII9-5 8810716 YP_003475413.1 CDS HMPREF0868_1128 NC_013895.2 626136 628028 D identified by match to protein family HMM PF00501; AMP-binding enzyme 626136..628028 Clostridiales genomosp. BVAB3 str. UPII9-5 8811390 YP_003475412.1 CDS HMPREF0868_1127 NC_013895.2 628120 629001 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR substrate binding domain-containing protein complement(628120..629001) Clostridiales genomosp. BVAB3 str. UPII9-5 8810431 YP_003475411.1 CDS HMPREF0868_1126 NC_013895.2 629206 630495 D hypothetical protein 629206..630495 Clostridiales genomosp. BVAB3 str. UPII9-5 8811307 YP_003475410.1 CDS HMPREF0868_1125 NC_013895.2 630497 631174 D identified by match to protein family HMM PF06912; hypothetical protein 630497..631174 Clostridiales genomosp. BVAB3 str. UPII9-5 8810039 YP_003475409.1 CDS HMPREF0868_1124 NC_013895.2 631201 632013 D identified by match to protein family HMM PF00119; ATP synthase subunit A 631201..632013 Clostridiales genomosp. BVAB3 str. UPII9-5 8810828 YP_003475408.1 CDS atpE NC_013895.2 632087 632467 D identified by match to protein family HMM PF00137; match to protein family HMM TIGR01260; ATP synthase F0 subunit C 632087..632467 Clostridiales genomosp. BVAB3 str. UPII9-5 8810323 YP_003475407.1 CDS HMPREF0868_1122 NC_013895.2 632480 632965 D identified by match to protein family HMM PF00430; ATP synthase B/B' CF(0) 632480..632965 Clostridiales genomosp. BVAB3 str. UPII9-5 8810942 YP_003475406.1 CDS atpA NC_013895.2 632965 634854 D identified by match to protein family HMM PF00006; match to protein family HMM PF00306; match to protein family HMM PF02874; match to protein family HMM PF09378; match to protein family HMM TIGR00962; ATP synthase F1 subunit alpha 632965..634854 Clostridiales genomosp. BVAB3 str. UPII9-5 8811271 YP_003475405.1 CDS atpG NC_013895.2 634841 635758 D identified by match to protein family HMM PF00231; match to protein family HMM TIGR01146; ATP synthase F1 subunit gamma 634841..635758 Clostridiales genomosp. BVAB3 str. UPII9-5 8810338 YP_003475404.1 CDS atpD NC_013895.2 635758 637158 D identified by match to protein family HMM PF00006; match to protein family HMM PF00306; match to protein family HMM PF02874; match to protein family HMM TIGR01039; ATP synthase F1 subunit beta 635758..637158 Clostridiales genomosp. BVAB3 str. UPII9-5 8810899 YP_003475403.1 CDS atpC NC_013895.2 637168 637587 D identified by match to protein family HMM PF00401; match to protein family HMM PF02823; match to protein family HMM TIGR01216; ATP synthase F1 subunit epsilon 637168..637587 Clostridiales genomosp. BVAB3 str. UPII9-5 8811444 YP_003475402.1 CDS HMPREF0868_1117 NC_013895.2 637828 638823 D identified by match to protein family HMM PF01297; periplasmic solute binding family protein 637828..638823 Clostridiales genomosp. BVAB3 str. UPII9-5 8810963 YP_003475401.1 CDS HMPREF0868_1116 NC_013895.2 638848 640884 D putative lipoprotein 638848..640884 Clostridiales genomosp. BVAB3 str. UPII9-5 8811553 YP_003475400.1 CDS HMPREF0868_1114 NC_013895.2 641562 641690 D hypothetical protein 641562..641690 Clostridiales genomosp. BVAB3 str. UPII9-5 8810852 YP_003475399.1 CDS HMPREF0868_1113 NC_013895.2 641753 642367 D identified by match to protein family HMM PF08241; match to protein family HMM PF08242; methyltransferase domain-containing protein 641753..642367 Clostridiales genomosp. BVAB3 str. UPII9-5 8810324 YP_003475398.1 CDS HMPREF0868_1112 NC_013895.2 642401 642556 D hypothetical protein 642401..642556 Clostridiales genomosp. BVAB3 str. UPII9-5 8810098 YP_003475397.1 CDS HMPREF0868_1111 NC_013895.2 642760 642879 R hypothetical protein complement(642760..642879) Clostridiales genomosp. BVAB3 str. UPII9-5 8810762 YP_003475396.1 CDS HMPREF0868_1110 NC_013895.2 642940 643659 R hypothetical protein complement(642940..643659) Clostridiales genomosp. BVAB3 str. UPII9-5 8810645 YP_003475395.1 CDS HMPREF0868_1109 NC_013895.2 644027 644350 R hypothetical protein complement(644027..644350) Clostridiales genomosp. BVAB3 str. UPII9-5 8811365 YP_003475394.1 CDS HMPREF0868_1108 NC_013895.2 644527 644961 R identified by match to protein family HMM PF01381; DNA-binding helix-turn-helix protein complement(644527..644961) Clostridiales genomosp. BVAB3 str. UPII9-5 8811050 YP_003475393.1 CDS HMPREF0868_1107 NC_013895.2 645130 646053 D identified by match to protein family HMM PF04055; radical SAM domain-containing protein 645130..646053 Clostridiales genomosp. BVAB3 str. UPII9-5 8810210 YP_003475392.1 CDS thiD_1 NC_013895.2 646338 647171 D identified by match to protein family HMM PF08543; match to protein family HMM TIGR00097; phosphomethylpyrimidine kinase 646338..647171 Clostridiales genomosp. BVAB3 str. UPII9-5 8810442 YP_003475391.1 CDS HMPREF0868_1104 NC_013895.2 647173 648366 D identified by match to protein family HMM PF02133; match to protein family HMM TIGR02358; putative hydroxymethylpyrimidine transporter CytX 647173..648366 Clostridiales genomosp. BVAB3 str. UPII9-5 8811162 YP_003475390.1 CDS HMPREF0868_1103 NC_013895.2 648579 648722 R hypothetical protein complement(648579..648722) Clostridiales genomosp. BVAB3 str. UPII9-5 8811364 YP_003475389.1 CDS HMPREF0868_1102 NC_013895.2 648679 650784 D hypothetical protein 648679..650784 Clostridiales genomosp. BVAB3 str. UPII9-5 8810325 YP_003475388.1 CDS HMPREF0868_1100 NC_013895.2 650762 653305 D hypothetical protein 650762..653305 Clostridiales genomosp. BVAB3 str. UPII9-5 8810672 YP_003475387.1 CDS HMPREF0868_1101 NC_013895.2 653285 654268 R identified by match to protein family HMM PF00535; glycosyltransferase group 2 family protein complement(653285..654268) Clostridiales genomosp. BVAB3 str. UPII9-5 8811530 YP_003475386.1 CDS HMPREF0868_1098 NC_013895.2 654808 655194 D methylglyoxal synthase family protein 654808..655194 Clostridiales genomosp. BVAB3 str. UPII9-5 8811056 YP_003475385.1 CDS pheS NC_013895.2 655487 656518 D identified by match to protein family HMM PF01409; match to protein family HMM PF02912; match to protein family HMM TIGR00468; phenylalanine--tRNA ligase subunit alpha 655487..656518 Clostridiales genomosp. BVAB3 str. UPII9-5 8810105 YP_003475384.1 CDS pheT NC_013895.2 656530 658977 D identified by match to protein family HMM PF01588; match to protein family HMM PF03147; match to protein family HMM PF03483; match to protein family HMM PF03484; match to protein family HMM TIGR00472; phenylalanine--tRNA ligase subunit beta 656530..658977 Clostridiales genomosp. BVAB3 str. UPII9-5 8810625 YP_003475383.1 CDS HMPREF0868_1094 NC_013895.2 659247 659519 D hypothetical protein 659247..659519 Clostridiales genomosp. BVAB3 str. UPII9-5 8811230 YP_003475382.1 CDS HMPREF0868_1093 NC_013895.2 659503 660861 D hypothetical protein 659503..660861 Clostridiales genomosp. BVAB3 str. UPII9-5 8811164 YP_003475381.1 CDS HMPREF0868_1092 NC_013895.2 660836 661840 D hypothetical protein 660836..661840 Clostridiales genomosp. BVAB3 str. UPII9-5 8810462 YP_003475380.1 CDS secA NC_013895.2 661979 664789 D identified by match to protein family HMM PF01043; match to protein family HMM PF02810; match to protein family HMM PF07516; match to protein family HMM PF07517; match to protein family HMM TIGR00963; preprotein translocase subunit SecA 661979..664789 Clostridiales genomosp. BVAB3 str. UPII9-5 8811516 YP_003475379.1 CDS HMPREF0868_1089 NC_013895.2 665308 665688 D identified by match to protein family HMM PF00392; GntR family transcriptional regulator 665308..665688 Clostridiales genomosp. BVAB3 str. UPII9-5 8810279 YP_003475378.1 CDS HMPREF0868_1088 NC_013895.2 665663 666586 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 665663..666586 Clostridiales genomosp. BVAB3 str. UPII9-5 8810229 YP_003475377.1 CDS HMPREF0868_1087 NC_013895.2 666635 668458 D hypothetical protein 666635..668458 Clostridiales genomosp. BVAB3 str. UPII9-5 8810778 YP_003475376.1 CDS HMPREF0868_1086 NC_013895.2 668578 669003 R identified by match to protein family HMM PF00293; NUDIX family hydrolase complement(668578..669003) Clostridiales genomosp. BVAB3 str. UPII9-5 8810057 YP_003475375.1 CDS xpt NC_013895.2 669281 669856 R identified by match to protein family HMM PF00156; match to protein family HMM TIGR01744; xanthine phosphoribosyltransferase complement(669281..669856) Clostridiales genomosp. BVAB3 str. UPII9-5 8810934 YP_003475374.1 CDS pbuX NC_013895.2 669843 671270 R identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801; match to protein family HMM TIGR03173; xanthine permease complement(669843..671270) Clostridiales genomosp. BVAB3 str. UPII9-5 8810509 YP_003475373.1 CDS HMPREF0868_1083 NC_013895.2 671771 673417 D identified by match to protein family HMM PF00496; putative glutathione-binding protein GsiB 671771..673417 Clostridiales genomosp. BVAB3 str. UPII9-5 8811195 YP_003475372.1 CDS gsiC NC_013895.2 673592 674512 D identified by match to protein family HMM PF00528; glutathione ABC transporter permease GsiC 673592..674512 Clostridiales genomosp. BVAB3 str. UPII9-5 8810292 YP_003475371.1 CDS HMPREF0868_1081 NC_013895.2 674523 675485 D identified by match to protein family HMM PF00528; ABC transporter permease 674523..675485 Clostridiales genomosp. BVAB3 str. UPII9-5 8811190 YP_003475370.1 CDS HMPREF0868_1080 NC_013895.2 675495 676496 D identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; ABC transporter ATP-binding protein 675495..676496 Clostridiales genomosp. BVAB3 str. UPII9-5 8810881 YP_003475369.1 CDS HMPREF0868_1079 NC_013895.2 676501 677475 D identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; ABC transporter ATP-binding protein 676501..677475 Clostridiales genomosp. BVAB3 str. UPII9-5 8810688 YP_003475368.1 CDS HMPREF0868_1078 NC_013895.2 677580 678884 D identified by match to protein family HMM PF01120; alpha-L-fucosidase 677580..678884 Clostridiales genomosp. BVAB3 str. UPII9-5 8811149 YP_003475367.1 CDS HMPREF0868_1077 NC_013895.2 679009 679794 D identified by match to protein family HMM PF03932; CutC family protein 679009..679794 Clostridiales genomosp. BVAB3 str. UPII9-5 8810472 YP_003475366.1 CDS HMPREF0868_1076 NC_013895.2 679899 682637 D identified by match to protein family HMM PF01841; transglutaminase-like protein 679899..682637 Clostridiales genomosp. BVAB3 str. UPII9-5 8811046 YP_003475365.1 CDS HMPREF0868_1075 NC_013895.2 682719 683711 D identified by match to protein family HMM PF00958; match to protein family HMM PF06508; match to protein family HMM TIGR00884; GMP synthase family protein 682719..683711 Clostridiales genomosp. BVAB3 str. UPII9-5 8810953 YP_003475364.1 CDS HMPREF0868_1074 NC_013895.2 683824 683964 D hypothetical protein 683824..683964 Clostridiales genomosp. BVAB3 str. UPII9-5 8810658 YP_003475363.1 CDS HMPREF0868_1073 NC_013895.2 684154 685188 R identified by match to protein family HMM PF03601; hypothetical protein complement(684154..685188) Clostridiales genomosp. BVAB3 str. UPII9-5 8810777 YP_003475362.1 CDS HMPREF0868_1072 NC_013895.2 685293 686168 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR substrate binding domain-containing protein 685293..686168 Clostridiales genomosp. BVAB3 str. UPII9-5 8811242 YP_003933639.1 CDS HMPREF0868_1071 NC_013895.2 686639 689314 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF05738; match to protein family HMM TIGR01376; LPXTG-motif cell wall anchor domain-containing protein 686639..689314 Clostridiales genomosp. BVAB3 str. UPII9-5 8810419 YP_003475361.1 CDS HMPREF0868_1070 NC_013895.2 689474 689773 D hypothetical protein 689474..689773 Clostridiales genomosp. BVAB3 str. UPII9-5 8811436 YP_003933640.1 CDS HMPREF0868_1069 NC_013895.2 689807 690151 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; hypothetical protein 689807..690151 Clostridiales genomosp. BVAB3 str. UPII9-5 8810536 YP_003933641.1 CDS HMPREF0868_1068 NC_013895.2 690290 690625 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; hypothetical protein 690290..690625 Clostridiales genomosp. BVAB3 str. UPII9-5 8810805 YP_003475360.1 CDS HMPREF0868_1067 NC_013895.2 690896 692197 D identified by match to protein family HMM PF00999; transporter, CPA2 family 690896..692197 Clostridiales genomosp. BVAB3 str. UPII9-5 8811504 YP_003475359.1 CDS guaA NC_013895.2 692298 693875 D identified by match to protein family HMM PF00117; match to protein family HMM PF00958; match to protein family HMM PF06508; match to protein family HMM TIGR00884; match to protein family HMM TIGR00888; GMP synthase 692298..693875 Clostridiales genomosp. BVAB3 str. UPII9-5 8810991 YP_003475358.1 CDS HMPREF0868_1065 NC_013895.2 694415 694645 R hypothetical protein complement(694415..694645) Clostridiales genomosp. BVAB3 str. UPII9-5 8810167 YP_003475357.1 CDS HMPREF0868_1064 NC_013895.2 694740 694922 R hypothetical protein complement(694740..694922) Clostridiales genomosp. BVAB3 str. UPII9-5 8811057 YP_003475356.1 CDS HMPREF0868_1063 NC_013895.2 695098 695307 D hypothetical protein 695098..695307 Clostridiales genomosp. BVAB3 str. UPII9-5 8810220 YP_003933642.1 CDS HMPREF0868_1062 NC_013895.2 695372 695506 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; hypothetical protein 695372..695506 Clostridiales genomosp. BVAB3 str. UPII9-5 8810880 YP_003933643.1 CDS HMPREF0868_1061 NC_013895.2 695543 695680 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; hypothetical protein 695543..695680 Clostridiales genomosp. BVAB3 str. UPII9-5 8811464 YP_003933644.1 CDS HMPREF0868_1060 NC_013895.2 695690 695998 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; Fic domain-containing toxin-antitoxin system toxin protein 695690..695998 Clostridiales genomosp. BVAB3 str. UPII9-5 8810559 YP_003475355.1 CDS HMPREF0868_1059 NC_013895.2 696179 698113 D hypothetical protein 696179..698113 Clostridiales genomosp. BVAB3 str. UPII9-5 8811280 YP_003475354.1 CDS HMPREF0868_1058 NC_013895.2 698554 699099 R identified by match to protein family HMM PF00255; glutathione peroxidase complement(698554..699099) Clostridiales genomosp. BVAB3 str. UPII9-5 8811085 YP_003475353.1 CDS HMPREF0868_1057 NC_013895.2 699577 700653 R hypothetical protein complement(699577..700653) Clostridiales genomosp. BVAB3 str. UPII9-5 8810413 YP_003475352.1 CDS HMPREF0868_1056 NC_013895.2 700646 701215 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(700646..701215) Clostridiales genomosp. BVAB3 str. UPII9-5 8811330 YP_003475351.1 CDS HMPREF0868_1055 NC_013895.2 701457 703196 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 701457..703196 Clostridiales genomosp. BVAB3 str. UPII9-5 8810374 YP_003475350.1 CDS HMPREF0868_1054 NC_013895.2 703186 704841 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 703186..704841 Clostridiales genomosp. BVAB3 str. UPII9-5 8811535 YP_003475349.1 CDS HMPREF0868_1052 NC_013895.2 705229 705633 R identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase family protein complement(705229..705633) Clostridiales genomosp. BVAB3 str. UPII9-5 8810701 YP_003475348.1 CDS HMPREF0868_1051 NC_013895.2 705855 706709 R identified by match to protein family HMM PF01408; match to protein family HMM PF03446; match to protein family HMM PF03807; phosphogluconate dehydrogenase (decarboxylating), NAD binding domain-containing protein complement(705855..706709) Clostridiales genomosp. BVAB3 str. UPII9-5 8810872 YP_003475347.1 CDS HMPREF0868_1050 NC_013895.2 706877 708331 D identified by match to protein family HMM PF00209; sodium:neurotransmitter symporter family protein 706877..708331 Clostridiales genomosp. BVAB3 str. UPII9-5 8809983 YP_003475346.1 CDS HMPREF0868_1049 NC_013895.2 708435 710015 R identified by match to protein family HMM PF00999; match to protein family HMM PF02080; TrkA C-terminal domain-containing protein complement(708435..710015) Clostridiales genomosp. BVAB3 str. UPII9-5 8811093 YP_003475345.1 CDS ileS NC_013895.2 710191 713406 D identified by match to protein family HMM PF00133; match to protein family HMM PF08264; match to protein family HMM PF09334; match to protein family HMM TIGR00392; isoleucine--tRNA ligase 710191..713406 Clostridiales genomosp. BVAB3 str. UPII9-5 8810226 YP_003475344.1 CDS HMPREF0868_1047 NC_013895.2 713409 714119 D identified by match to protein family HMM PF02163; M50 family peptidase 713409..714119 Clostridiales genomosp. BVAB3 str. UPII9-5 8810348 YP_003475343.1 CDS HMPREF0868_1046 NC_013895.2 714119 714931 D identified by match to protein family HMM PF02616; ScpA/B protein 714119..714931 Clostridiales genomosp. BVAB3 str. UPII9-5 8811384 YP_003475342.1 CDS scpB NC_013895.2 714924 715544 D identified by match to protein family HMM PF04079; match to protein family HMM TIGR00281; segregation and condensation protein B 714924..715544 Clostridiales genomosp. BVAB3 str. UPII9-5 8810667 YP_003475341.1 CDS cmk NC_013895.2 715553 716236 D identified by match to protein family HMM PF02224; match to protein family HMM TIGR00017; cytidylate kinase 715553..716236 Clostridiales genomosp. BVAB3 str. UPII9-5 8811113 YP_003475340.1 CDS HMPREF0868_1043 NC_013895.2 716214 717008 D hypothetical protein 716214..717008 Clostridiales genomosp. BVAB3 str. UPII9-5 8810017 YP_003475339.1 CDS ispH NC_013895.2 716989 719103 D identified by match to protein family HMM PF00575; match to protein family HMM PF02401; match to protein family HMM TIGR00216; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 716989..719103 Clostridiales genomosp. BVAB3 str. UPII9-5 8810212 YP_003475338.1 CDS HMPREF0868_1041 NC_013895.2 719304 720623 R identified by match to protein family HMM PF01546; match to protein family HMM TIGR01887; putative dipeptidase PepV complement(719304..720623) Clostridiales genomosp. BVAB3 str. UPII9-5 8811121 YP_003475337.1 CDS rbr NC_013895.2 720841 721434 D identified by match to protein family HMM PF02915; rubrerythrin 720841..721434 Clostridiales genomosp. BVAB3 str. UPII9-5 8810636 YP_003475336.1 CDS HMPREF0868_1039 NC_013895.2 721641 721853 D identified by match to protein family HMM PF00313; cold-shock DNA-binding domain-containing protein 721641..721853 Clostridiales genomosp. BVAB3 str. UPII9-5 8811297 YP_003475335.1 CDS artM NC_013895.2 721947 722669 R identified by match to protein family HMM PF00005; arginine ABC transporter ATP-binding protein ArtM complement(721947..722669) Clostridiales genomosp. BVAB3 str. UPII9-5 8811453 YP_003475334.1 CDS HMPREF0868_1037 NC_013895.2 722653 723342 R identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; putative arginine ABC transporter permease ArtQ complement(722653..723342) Clostridiales genomosp. BVAB3 str. UPII9-5 8810484 YP_003475333.1 CDS HMPREF0868_1036 NC_013895.2 723415 724320 R identified by match to protein family HMM PF00497; arginine ABC transporter periplasmic arginine-binding protein ArtP family protein complement(723415..724320) Clostridiales genomosp. BVAB3 str. UPII9-5 8810046 YP_003475332.1 CDS HMPREF0868_1035 NC_013895.2 724577 725176 D identified by match to protein family HMM PF01569; PAP2 family protein 724577..725176 Clostridiales genomosp. BVAB3 str. UPII9-5 8811526 YP_003475331.1 CDS HMPREF0868_1032 NC_013895.2 725486 726472 D hypothetical protein 725486..726472 Clostridiales genomosp. BVAB3 str. UPII9-5 8811524 YP_003475330.1 CDS pepD_2 NC_013895.2 726825 728393 R identified by match to protein family HMM PF03577; dipeptidase complement(726825..728393) Clostridiales genomosp. BVAB3 str. UPII9-5 8810044 YP_003475329.1 CDS HMPREF0868_1029 NC_013895.2 728600 728986 D identified by match to protein family HMM PF03960; ArsC family protein 728600..728986 Clostridiales genomosp. BVAB3 str. UPII9-5 8811294 YP_003475328.1 CDS HMPREF0868_1028 NC_013895.2 729027 729857 D hypothetical protein 729027..729857 Clostridiales genomosp. BVAB3 str. UPII9-5 8810386 YP_003475327.1 CDS HMPREF0868_1027 NC_013895.2 729925 730425 R GAF domain-containing protein complement(729925..730425) Clostridiales genomosp. BVAB3 str. UPII9-5 8810467 YP_003475326.1 CDS HMPREF0868_1026 NC_013895.2 730575 731960 D identified by match to protein family HMM PF00349; match to protein family HMM PF03727; hexokinase 730575..731960 Clostridiales genomosp. BVAB3 str. UPII9-5 8811135 YP_003475325.1 CDS HMPREF0868_1025 NC_013895.2 731997 732947 D hypothetical protein 731997..732947 Clostridiales genomosp. BVAB3 str. UPII9-5 8809980 YP_003475324.1 CDS HMPREF0868_1024 NC_013895.2 733285 733545 D hypothetical protein 733285..733545 Clostridiales genomosp. BVAB3 str. UPII9-5 8811491 YP_003475323.1 CDS HMPREF0868_1023 NC_013895.2 733608 733901 D identified by match to protein family HMM PF01479; S4 domain-containing protein 733608..733901 Clostridiales genomosp. BVAB3 str. UPII9-5 8810160 YP_003475322.1 CDS HMPREF0868_1022 NC_013895.2 733891 734211 D identified by match to protein family HMM PF04977; septum formation initiator 733891..734211 Clostridiales genomosp. BVAB3 str. UPII9-5 8810894 YP_003475321.1 CDS recR NC_013895.2 734254 734856 R identified by match to protein family HMM PF01751; match to protein family HMM PF02132; match to protein family HMM TIGR00615; recombination protein RecR complement(734254..734856) Clostridiales genomosp. BVAB3 str. UPII9-5 8810713 YP_003475320.1 CDS HMPREF0868_1020 NC_013895.2 734856 735212 R identified by match to protein family HMM PF02575; match to protein family HMM TIGR00103; YbaB/EbfC family DNA-binding protein complement(734856..735212) Clostridiales genomosp. BVAB3 str. UPII9-5 8810765 YP_003475319.1 CDS dnaX NC_013895.2 735214 737052 R identified by match to protein family HMM PF00004; match to protein family HMM TIGR02397; DNA polymerase III subunit gamma and tau complement(735214..737052) Clostridiales genomosp. BVAB3 str. UPII9-5 8811559 YP_003475318.1 CDS HMPREF0868_1017 NC_013895.2 737251 738699 R identified by match to protein family HMM PF01276; Orn/Lys/Arg decarboxylase, major domain-containing protein complement(737251..738699) Clostridiales genomosp. BVAB3 str. UPII9-5 8810933 YP_003475317.1 CDS HMPREF0868_1016 NC_013895.2 738701 739261 R hypothetical protein complement(738701..739261) Clostridiales genomosp. BVAB3 str. UPII9-5 8810247 YP_003475316.1 CDS tmk NC_013895.2 739417 740055 D identified by match to protein family HMM PF02223; match to protein family HMM TIGR00041; dTMP kinase 739417..740055 Clostridiales genomosp. BVAB3 str. UPII9-5 8809976 YP_003475315.1 CDS HMPREF0868_1014 NC_013895.2 740052 740381 D identified by match to protein family HMM PF06153; hypothetical protein 740052..740381 Clostridiales genomosp. BVAB3 str. UPII9-5 8810885 YP_003475314.1 CDS HMPREF0868_1013 NC_013895.2 740390 741439 D hypothetical protein 740390..741439 Clostridiales genomosp. BVAB3 str. UPII9-5 8810253 YP_003475313.1 CDS HMPREF0868_1012 NC_013895.2 741432 742709 D identified by match to protein family HMM PF04468; PSP1 C-terminal domain-containing protein 741432..742709 Clostridiales genomosp. BVAB3 str. UPII9-5 8811145 YP_003475312.1 CDS fer NC_013895.2 742872 743042 D identified by match to protein family HMM PF00037; ferredoxin 742872..743042 Clostridiales genomosp. BVAB3 str. UPII9-5 8811138 YP_003475311.1 CDS HMPREF0868_1010 NC_013895.2 743182 744069 D hypothetical protein 743182..744069 Clostridiales genomosp. BVAB3 str. UPII9-5 8810669 YP_003475310.1 CDS HMPREF0868_1009 NC_013895.2 744092 745060 D identified by match to protein family HMM PF00590; match to protein family HMM TIGR00096; YraL family S-adenosylmethionine-dependent methyltransferase 744092..745060 Clostridiales genomosp. BVAB3 str. UPII9-5 8811476 YP_003475309.1 CDS yfhO NC_013895.2 745118 748303 D identified by match to protein family HMM PF09586; membrane protein 745118..748303 Clostridiales genomosp. BVAB3 str. UPII9-5 8810522 YP_003475308.1 CDS rplM NC_013895.2 748405 748839 D identified by match to protein family HMM PF00572; match to protein family HMM TIGR01066; 50S ribosomal protein L13 748405..748839 Clostridiales genomosp. BVAB3 str. UPII9-5 8811416 YP_003475307.1 CDS rpsI NC_013895.2 748854 749258 D identified by match to protein family HMM PF00380; 30S ribosomal protein S9 748854..749258 Clostridiales genomosp. BVAB3 str. UPII9-5 8810680 YP_003475306.1 CDS HMPREF0868_1005 NC_013895.2 749313 749888 D identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150; hypothetical protein 749313..749888 Clostridiales genomosp. BVAB3 str. UPII9-5 8810835 YP_003475305.1 CDS yeaZ NC_013895.2 749892 750572 D identified by match to protein family HMM PF00814; match to protein family HMM TIGR03725; universal bacterial protein YeaZ 749892..750572 Clostridiales genomosp. BVAB3 str. UPII9-5 8810059 YP_003475304.1 CDS HMPREF0868_1003 NC_013895.2 750565 751188 D identified by match to protein family HMM PF00583; GNAT family acetyltransferase 750565..751188 Clostridiales genomosp. BVAB3 str. UPII9-5 8810040 YP_003475303.1 CDS HMPREF0868_1002 NC_013895.2 751263 751526 D identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003; phosphocarrier, HPr family 751263..751526 Clostridiales genomosp. BVAB3 str. UPII9-5 8811117 YP_003475302.1 CDS uvrC NC_013895.2 751541 753493 D identified by match to protein family HMM PF01541; match to protein family HMM PF02151; match to protein family HMM PF08459; match to protein family HMM TIGR00194; excinuclease ABC subunit C 751541..753493 Clostridiales genomosp. BVAB3 str. UPII9-5 8811204 YP_003475301.1 CDS HMPREF0868_1000 NC_013895.2 753507 754241 D identified by match to protein family HMM PF00149; Ser/Thr phosphatase family protein 753507..754241 Clostridiales genomosp. BVAB3 str. UPII9-5 8811000 YP_003475300.1 CDS HMPREF0868_0999 NC_013895.2 754431 754745 D identified by match to protein family HMM PF01022; putative arsenical resistance operon repressor 754431..754745 Clostridiales genomosp. BVAB3 str. UPII9-5 8811266 YP_003475299.1 CDS arsD NC_013895.2 754718 755209 D identified by match to protein family HMM PF06953; arsenical resistance operon trans-acting repressor ArsD 754718..755209 Clostridiales genomosp. BVAB3 str. UPII9-5 8810394 YP_003475298.1 CDS HMPREF0868_0997 NC_013895.2 755285 756847 D identified by match to protein family HMM PF00654; match to protein family HMM PF02080; ClC family chloride transporter 755285..756847 Clostridiales genomosp. BVAB3 str. UPII9-5 8810737 YP_003475297.1 CDS HMPREF0868_0996 NC_013895.2 756854 756970 D hypothetical protein 756854..756970 Clostridiales genomosp. BVAB3 str. UPII9-5 8811546 YP_003475296.1 CDS HMPREF0868_0994 NC_013895.2 757217 757354 D hypothetical protein 757217..757354 Clostridiales genomosp. BVAB3 str. UPII9-5 8810398 YP_003475295.1 CDS HMPREF0868_0993 NC_013895.2 757347 758927 D identified by match to protein family HMM PF00496; family 5 extracellular solute-binding protein 757347..758927 Clostridiales genomosp. BVAB3 str. UPII9-5 8810297 YP_003475294.1 CDS HMPREF0868_0992 NC_013895.2 758960 759922 D identified by match to protein family HMM PF00528; ABC transporter permease 758960..759922 Clostridiales genomosp. BVAB3 str. UPII9-5 8810673 YP_003475293.1 CDS HMPREF0868_0991 NC_013895.2 759915 760745 D identified by match to protein family HMM PF00528; ABC transporter permease 759915..760745 Clostridiales genomosp. BVAB3 str. UPII9-5 8811358 YP_003475292.1 CDS HMPREF0868_0990 NC_013895.2 760738 761784 D identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; ABC transporter ATP-binding protein 760738..761784 Clostridiales genomosp. BVAB3 str. UPII9-5 8810052 YP_003933645.1 CDS HMPREF0868_0989 NC_013895.2 761781 762557 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 761781..762557 Clostridiales genomosp. BVAB3 str. UPII9-5 8810151 YP_003475291.1 CDS gpmA NC_013895.2 762611 763360 D identified by match to protein family HMM PF00300; match to protein family HMM TIGR01258; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 762611..763360 Clostridiales genomosp. BVAB3 str. UPII9-5 8810734 YP_003475290.1 CDS HMPREF0868_0987 NC_013895.2 763631 763951 D identified by match to protein family HMM PF03551; PadR family transcriptional regulator 763631..763951 Clostridiales genomosp. BVAB3 str. UPII9-5 8810018 YP_003475289.1 CDS HMPREF0868_0986 NC_013895.2 763944 764612 D hypothetical protein 763944..764612 Clostridiales genomosp. BVAB3 str. UPII9-5 8811001 YP_003475288.1 CDS HMPREF0868_0985 NC_013895.2 764609 765472 D putative lipoprotein 764609..765472 Clostridiales genomosp. BVAB3 str. UPII9-5 8811340 YP_003475287.1 CDS HMPREF0868_0984 NC_013895.2 765561 766766 R identified by match to protein family HMM PF00375; dicarboxylate/amino acid:cation Na+/H+ symporter family protein complement(765561..766766) Clostridiales genomosp. BVAB3 str. UPII9-5 8810269 YP_003475286.1 CDS HMPREF0868_0983 NC_013895.2 766882 768066 R hypothetical protein complement(766882..768066) Clostridiales genomosp. BVAB3 str. UPII9-5 8811168 YP_003475285.1 CDS HMPREF0868_0982 NC_013895.2 768067 769014 R identified by match to protein family HMM PF02588; hypothetical protein complement(768067..769014) Clostridiales genomosp. BVAB3 str. UPII9-5 8810021 YP_003475284.1 CDS HMPREF0868_0981 NC_013895.2 769306 770934 D identified by match to protein family HMM PF01546; M20/M25/M40 family peptidase 769306..770934 Clostridiales genomosp. BVAB3 str. UPII9-5 8810936 YP_003475283.1 CDS HMPREF0868_0980 NC_013895.2 771094 771510 D identified by match to protein family HMM PF00258; putative flavodoxin 771094..771510 Clostridiales genomosp. BVAB3 str. UPII9-5 8811446 YP_003475282.1 CDS HMPREF0868_0979 NC_013895.2 771712 777327 D identified by match to protein family HMM PF00082; match to protein family HMM PF02225; match to protein family HMM PF06280; PA domain-containing protein 771712..777327 Clostridiales genomosp. BVAB3 str. UPII9-5 8810890 YP_003475281.1 CDS pip NC_013895.2 777407 778333 R identified by match to protein family HMM PF00561; match to protein family HMM TIGR01249; prolyl aminopeptidase complement(777407..778333) Clostridiales genomosp. BVAB3 str. UPII9-5 8811529 YP_003475280.1 CDS HMPREF0868_0975 NC_013895.2 778716 779567 R hypothetical protein complement(778716..779567) Clostridiales genomosp. BVAB3 str. UPII9-5 8811267 YP_003475279.1 CDS HMPREF0868_0974 NC_013895.2 779785 781773 D identified by match to protein family HMM PF00204; match to protein family HMM PF00986; match to protein family HMM PF01751; DNA gyrase subunit B, C-terminal domain-containing protein 779785..781773 Clostridiales genomosp. BVAB3 str. UPII9-5 8810523 YP_003475278.1 CDS HMPREF0868_0973 NC_013895.2 781787 783970 D identified by match to protein family HMM PF00521; DNA gyrase/topoisomerase IV subunit A 781787..783970 Clostridiales genomosp. BVAB3 str. UPII9-5 8810637 YP_003475277.1 CDS HMPREF0868_0972 NC_013895.2 784014 785939 D hypothetical protein 784014..785939 Clostridiales genomosp. BVAB3 str. UPII9-5 8810891 YP_003475276.1 CDS HMPREF0868_0971 NC_013895.2 786051 787406 R identified by match to protein family HMM PF00696; match to protein family HMM PF01842; match to protein family HMM TIGR00657; aspartate kinase complement(786051..787406) Clostridiales genomosp. BVAB3 str. UPII9-5 8810075 YP_003475275.1 CDS HMPREF0868_0970 NC_013895.2 787622 788320 D identified by match to protein family HMM PF09419; match to protein family HMM TIGR01662; match to protein family HMM TIGR01668; HAD phosphatase 787622..788320 Clostridiales genomosp. BVAB3 str. UPII9-5 8811132 YP_003475274.1 CDS HMPREF0868_0969 NC_013895.2 788549 789649 D identified by match to protein family HMM PF00557; match to protein family HMM PF01321; putative Xaa-Pro dipeptidase 788549..789649 Clostridiales genomosp. BVAB3 str. UPII9-5 8811156 YP_003475273.1 CDS HMPREF0868_0968 NC_013895.2 789665 789787 R hypothetical protein complement(789665..789787) Clostridiales genomosp. BVAB3 str. UPII9-5 8811024 YP_003475272.1 CDS secD NC_013895.2 789774 791048 D identified by match to protein family HMM PF02355; match to protein family HMM TIGR00916; match to protein family HMM TIGR01129; export membrane protein SecD 789774..791048 Clostridiales genomosp. BVAB3 str. UPII9-5 8810171 YP_003933646.1 CDS secF NC_013895.2 791045 792001 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF02355; match to protein family HMM TIGR00966; export membrane protein SecF 791045..792001 Clostridiales genomosp. BVAB3 str. UPII9-5 8810847 YP_003475271.1 CDS HMPREF0868_0965 NC_013895.2 792102 793355 D identified by match to protein family HMM TIGR00268; hypothetical protein 792102..793355 Clostridiales genomosp. BVAB3 str. UPII9-5 8809954 YP_003475270.1 CDS HMPREF0868_0964 NC_013895.2 793482 794348 R identified by match to protein family HMM PF01680; match to protein family HMM TIGR00343; pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 complement(793482..794348) Clostridiales genomosp. BVAB3 str. UPII9-5 8811430 YP_003475269.1 CDS HMPREF0868_0963 NC_013895.2 794522 796084 D identified by match to protein family HMM PF00013; match to protein family HMM PF01966; match to protein family HMM TIGR00277; match to protein family HMM TIGR03319; hypothetical protein 794522..796084 Clostridiales genomosp. BVAB3 str. UPII9-5 8810538 YP_003475268.1 CDS HMPREF0868_0962 NC_013895.2 796215 797000 D identified by match to protein family HMM PF00149; match to protein family HMM TIGR00282; putative metallophosphoesterase 796215..797000 Clostridiales genomosp. BVAB3 str. UPII9-5 8811508 YP_003475267.1 CDS lspA NC_013895.2 797025 797510 D identified by match to protein family HMM PF01252; match to protein family HMM TIGR00077; signal peptidase II 797025..797510 Clostridiales genomosp. BVAB3 str. UPII9-5 8810457 YP_003475266.1 CDS HMPREF0868_0960 NC_013895.2 797482 798441 D identified by match to protein family HMM PF00849; match to protein family HMM TIGR00005; putative ribosomal large subunit pseudouridine synthase D 797482..798441 Clostridiales genomosp. BVAB3 str. UPII9-5 8810117 YP_003475265.1 CDS HMPREF0868_0959 NC_013895.2 798438 799484 D identified by match to protein family HMM PF02562; PhoH family protein 798438..799484 Clostridiales genomosp. BVAB3 str. UPII9-5 8810539 YP_003475264.1 CDS HMPREF0868_0958 NC_013895.2 799497 801644 D identified by match to protein family HMM PF01966; match to protein family HMM TIGR00277; putative 7TM-HD extracellular 799497..801644 Clostridiales genomosp. BVAB3 str. UPII9-5 8811320 YP_003475263.1 CDS era NC_013895.2 801613 803304 D identified by match to protein family HMM PF01926; match to protein family HMM PF02130; match to protein family HMM PF07650; match to protein family HMM TIGR00043; match to protein family HMM TIGR00231; match to protein family HMM TIGR00436; GTP-binding protein Era 801613..803304 Clostridiales genomosp. BVAB3 str. UPII9-5 8810425 YP_003475262.1 CDS recO NC_013895.2 803317 804090 D identified by match to protein family HMM PF02565; match to protein family HMM TIGR00613; DNA repair protein RecO 803317..804090 Clostridiales genomosp. BVAB3 str. UPII9-5 8810264 YP_003475261.1 CDS HMPREF0868_0955 NC_013895.2 804096 806576 R identified by match to protein family HMM PF06733; DEAD2 domain-containing protein complement(804096..806576) Clostridiales genomosp. BVAB3 str. UPII9-5 8810941 YP_003475260.1 CDS HMPREF0868_0954 NC_013895.2 806680 808185 D identified by match to protein family HMM PF00478; match to protein family HMM PF00571; inosine 5-monophosphate dehydrogenase 806680..808185 Clostridiales genomosp. BVAB3 str. UPII9-5 8810067 YP_003475259.1 CDS greA NC_013895.2 808297 808779 D identified by match to protein family HMM PF01272; match to protein family HMM PF03449; match to protein family HMM TIGR01462; transcription elongation factor GreA 808297..808779 Clostridiales genomosp. BVAB3 str. UPII9-5 8811359 YP_003475258.1 CDS lysS NC_013895.2 808788 810770 D identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM PF01588; match to protein family HMM TIGR00499; lysine--tRNA ligase 808788..810770 Clostridiales genomosp. BVAB3 str. UPII9-5 8810079 YP_003475257.1 CDS HMPREF0868_0951 NC_013895.2 811272 813341 D identified by match to protein family HMM PF07564; match to protein family HMM TIGR01167; LPXTG-motif cell wall anchor domain-containing protein 811272..813341 Clostridiales genomosp. BVAB3 str. UPII9-5 8810961 YP_003933647.1 CDS HMPREF0868_0950 NC_013895.2 813667 814131 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain one or more premature stops and/or frameshifts; hypothetical protein 813667..814131 Clostridiales genomosp. BVAB3 str. UPII9-5 8810236 YP_003475256.1 CDS HMPREF0868_0949 NC_013895.2 814465 816741 D identified by match to protein family HMM TIGR01167; LPXTG-motif cell wall anchor domain-containing protein 814465..816741 Clostridiales genomosp. BVAB3 str. UPII9-5 8810820 YP_003475255.1 CDS HMPREF0868_0948 NC_013895.2 817108 817251 D hypothetical protein 817108..817251 Clostridiales genomosp. BVAB3 str. UPII9-5 8810307 YP_003475254.1 CDS nhaC_1 NC_013895.2 817392 818774 R identified by match to protein family HMM PF03553; match to protein family HMM TIGR00931; Na+/H+ antiporter NhaC complement(817392..818774) Clostridiales genomosp. BVAB3 str. UPII9-5 8810984 YP_003475253.1 CDS HMPREF0868_0946 NC_013895.2 818946 819074 D hypothetical protein 818946..819074 Clostridiales genomosp. BVAB3 str. UPII9-5 8810671 YP_003475252.1 CDS rpsB NC_013895.2 819145 819933 D identified by match to protein family HMM PF00318; match to protein family HMM TIGR01011; 30S ribosomal protein S2 819145..819933 Clostridiales genomosp. BVAB3 str. UPII9-5 8811354 YP_003475251.1 CDS tsf NC_013895.2 819989 820636 D identified by match to protein family HMM PF00627; match to protein family HMM PF00889; match to protein family HMM TIGR00116; translation elongation factor Ts 819989..820636 Clostridiales genomosp. BVAB3 str. UPII9-5 8810089 YP_003475250.1 CDS pyrH NC_013895.2 820700 821407 D identified by match to protein family HMM PF00696; match to protein family HMM TIGR02075; UMP kinase 820700..821407 Clostridiales genomosp. BVAB3 str. UPII9-5 8810834 YP_003475249.1 CDS frr NC_013895.2 821480 822043 D identified by match to protein family HMM PF01765; match to protein family HMM TIGR00496; ribosome recycling factor 821480..822043 Clostridiales genomosp. BVAB3 str. UPII9-5 8811027 YP_003475248.1 CDS uppS NC_013895.2 822040 822825 D identified by match to protein family HMM PF01255; match to protein family HMM TIGR00055; di-trans,poly-cis-decaprenylcistransferase 822040..822825 Clostridiales genomosp. BVAB3 str. UPII9-5 8810146 YP_003475247.1 CDS cdsA NC_013895.2 822800 823669 D identified by match to protein family HMM PF01148; phosphatidate cytidylyltransferase 822800..823669 Clostridiales genomosp. BVAB3 str. UPII9-5 8810473 YP_003475246.1 CDS dxr NC_013895.2 823818 825038 D identified by match to protein family HMM PF02670; match to protein family HMM PF08436; match to protein family HMM TIGR00243; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 823818..825038 Clostridiales genomosp. BVAB3 str. UPII9-5 8810417 YP_003475245.1 CDS HMPREF0868_0938 NC_013895.2 825035 826357 D identified by match to protein family HMM PF02163; putative RIP metalloprotease RseP 825035..826357 Clostridiales genomosp. BVAB3 str. UPII9-5 8810276 YP_003475244.1 CDS ispG NC_013895.2 826363 827427 D identified by match to protein family HMM PF04551; match to protein family HMM TIGR00612; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 826363..827427 Clostridiales genomosp. BVAB3 str. UPII9-5 8811079 YP_003475243.1 CDS polC NC_013895.2 827427 831914 D identified by match to protein family HMM PF00929; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00573; match to protein family HMM TIGR01405; DNA polymerase III subunit alpha, Gram-positive type 827427..831914 Clostridiales genomosp. BVAB3 str. UPII9-5 8811434 YP_003475242.1 CDS priA NC_013895.2 831951 834518 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851; match to protein family HMM TIGR00595; primosomal protein N' 831951..834518 Clostridiales genomosp. BVAB3 str. UPII9-5 8810553 YP_003475241.1 CDS def NC_013895.2 834552 835034 D identified by match to protein family HMM PF01327; match to protein family HMM TIGR00079; peptide deformylase 834552..835034 Clostridiales genomosp. BVAB3 str. UPII9-5 8811313 YP_003475240.1 CDS fmt NC_013895.2 835117 836088 D identified by match to protein family HMM PF00551; match to protein family HMM PF02911; match to protein family HMM TIGR00460; methionyl-tRNA formyltransferase 835117..836088 Clostridiales genomosp. BVAB3 str. UPII9-5 8811047 YP_003475239.1 CDS HMPREF0868_0931 NC_013895.2 836090 837586 D identified by match to protein family HMM PF01029; match to protein family HMM PF01189; putative ribosomal RNA small subunit methyltransferase B 836090..837586 Clostridiales genomosp. BVAB3 str. UPII9-5 8810399 YP_003475238.1 CDS HMPREF0868_0932 NC_013895.2 837583 838689 R identified by match to protein family HMM PF02424; ApbE family protein complement(837583..838689) Clostridiales genomosp. BVAB3 str. UPII9-5 8809958 YP_003475237.1 CDS HMPREF0868_0930 NC_013895.2 838697 838954 R hypothetical protein complement(838697..838954) Clostridiales genomosp. BVAB3 str. UPII9-5 8810452 YP_003475236.1 CDS HMPREF0868_0929 NC_013895.2 839082 839648 D hypothetical protein 839082..839648 Clostridiales genomosp. BVAB3 str. UPII9-5 8811303 YP_003475235.1 CDS HMPREF0868_0928 NC_013895.2 839722 840270 R hypothetical protein complement(839722..840270) Clostridiales genomosp. BVAB3 str. UPII9-5 8810080 YP_003475234.1 CDS HMPREF0868_0926 NC_013895.2 840447 841334 R identified by match to protein family HMM PF05116; match to protein family HMM PF08282; HAD hydrolase complement(840447..841334) Clostridiales genomosp. BVAB3 str. UPII9-5 8811091 YP_003475233.1 CDS HMPREF0868_0925 NC_013895.2 841327 842289 R hypothetical protein complement(841327..842289) Clostridiales genomosp. BVAB3 str. UPII9-5 8810879 YP_003475232.1 CDS HMPREF0868_0924 NC_013895.2 842464 842721 D identified by match to protein family HMM PF05768; glutaredoxin-like protein 842464..842721 Clostridiales genomosp. BVAB3 str. UPII9-5 8810347 YP_003475231.1 CDS HMPREF0868_0923 NC_013895.2 842772 843470 D identified by match to protein family HMM PF02397; sugar transferase 842772..843470 Clostridiales genomosp. BVAB3 str. UPII9-5 8811534 YP_003933648.1 CDS HMPREF0868_0921 NC_013895.2 843737 844294 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 843737..844294 Clostridiales genomosp. BVAB3 str. UPII9-5 8810648 YP_003475230.1 CDS HMPREF0868_0919 NC_013895.2 844297 844530 D hypothetical protein 844297..844530 Clostridiales genomosp. BVAB3 str. UPII9-5 8811158 YP_003475229.1 CDS HMPREF0868_0920 NC_013895.2 844490 844906 R hypothetical protein complement(844490..844906) Clostridiales genomosp. BVAB3 str. UPII9-5 8811332 YP_003475228.1 CDS ruvC NC_013895.2 845019 845522 D identified by match to protein family HMM PF02075; match to protein family HMM TIGR00228; crossover junction endodeoxyribonuclease RuvC 845019..845522 Clostridiales genomosp. BVAB3 str. UPII9-5 8809999 YP_003475227.1 CDS ruvA NC_013895.2 845604 846224 D identified by match to protein family HMM PF01330; match to protein family HMM TIGR00084; Holliday junction DNA helicase RuvA 845604..846224 Clostridiales genomosp. BVAB3 str. UPII9-5 8811478 YP_003475226.1 CDS ruvB NC_013895.2 846276 847394 D identified by match to protein family HMM PF00004; match to protein family HMM PF00308; match to protein family HMM PF05491; match to protein family HMM PF07728; match to protein family HMM TIGR00635; Holliday junction DNA helicase RuvB 846276..847394 Clostridiales genomosp. BVAB3 str. UPII9-5 8811458 YP_003475225.1 CDS HMPREF0868_0915 NC_013895.2 847458 848141 D identified by match to protein family HMM PF02677; hypothetical protein 847458..848141 Clostridiales genomosp. BVAB3 str. UPII9-5 8810556 YP_003475224.1 CDS fbpA NC_013895.2 848172 850082 R identified by match to protein family HMM PF05670; match to protein family HMM PF05833; fibronectin-binding protein A complement(848172..850082) Clostridiales genomosp. BVAB3 str. UPII9-5 8810848 YP_003475223.1 CDS HMPREF0868_0913 NC_013895.2 850342 850581 D hypothetical protein 850342..850581 Clostridiales genomosp. BVAB3 str. UPII9-5 8809996 YP_003475222.1 CDS HMPREF0868_0912 NC_013895.2 850601 851698 D identified by match to protein family HMM PF01035; match to protein family HMM TIGR00589; methylated-DNA-[protein]-cysteine S-methyltransferase 850601..851698 Clostridiales genomosp. BVAB3 str. UPII9-5 8811199 YP_003475221.1 CDS HMPREF0868_0911 NC_013895.2 851682 852407 D identified by match to protein family HMM PF01613; flavin reductase-like protein 851682..852407 Clostridiales genomosp. BVAB3 str. UPII9-5 8810694 YP_003475220.1 CDS HMPREF0868_0910 NC_013895.2 852439 853008 R hypothetical protein complement(852439..853008) Clostridiales genomosp. BVAB3 str. UPII9-5 8811517 YP_003475219.1 CDS pepF_1 NC_013895.2 853644 855443 D identified by match to protein family HMM PF01432; match to protein family HMM PF08439; match to protein family HMM TIGR00181; oligoendopeptidase F 853644..855443 Clostridiales genomosp. BVAB3 str. UPII9-5 8810085 YP_003475218.1 CDS rplI NC_013895.2 855531 855974 D identified by match to protein family HMM PF01281; match to protein family HMM PF03948; match to protein family HMM TIGR00158; 50S ribosomal protein L9 855531..855974 Clostridiales genomosp. BVAB3 str. UPII9-5 8811346 YP_003475217.1 CDS dnaB NC_013895.2 855976 857418 D identified by match to protein family HMM PF00772; match to protein family HMM PF03796; match to protein family HMM TIGR00665; replicative DNA helicase 855976..857418 Clostridiales genomosp. BVAB3 str. UPII9-5 8810638 YP_003475216.1 CDS tilS NC_013895.2 857411 858862 D identified by match to protein family HMM PF01171; match to protein family HMM TIGR02432; match to protein family HMM TIGR02433; tRNA(Ile)-lysidine synthetase 857411..858862 Clostridiales genomosp. BVAB3 str. UPII9-5 8811355 YP_003475215.1 CDS hpt NC_013895.2 858819 859355 D identified by match to protein family HMM PF00156; match to protein family HMM TIGR01203; hypoxanthine phosphoribosyltransferase 858819..859355 Clostridiales genomosp. BVAB3 str. UPII9-5 8810395 YP_003475214.1 CDS hflB NC_013895.2 859359 861380 D identified by match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF06480; match to protein family HMM TIGR01241; ATP-dependent metallopeptidase HflB 859359..861380 Clostridiales genomosp. BVAB3 str. UPII9-5 8811256 YP_003475213.1 CDS murC NC_013895.2 861531 863027 R identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01082; UDP-N-acetylmuramate--L-alanine ligase complement(861531..863027) Clostridiales genomosp. BVAB3 str. UPII9-5 8810416 YP_003475212.1 CDS prs2_1 NC_013895.2 863011 864267 R identified by match to protein family HMM PF00156; match to protein family HMM TIGR01251; ribose-phosphate diphosphokinase complement(863011..864267) Clostridiales genomosp. BVAB3 str. UPII9-5 8810250 YP_003475211.1 CDS prs2_2 NC_013895.2 864298 865518 R identified by match to protein family HMM PF00156; match to protein family HMM TIGR01251; ribose-phosphate diphosphokinase complement(864298..865518) Clostridiales genomosp. BVAB3 str. UPII9-5 8810932 YP_003475210.1 CDS ysxC NC_013895.2 865713 866366 D identified by match to protein family HMM PF01926; match to protein family HMM TIGR00231; match to protein family HMM TIGR03598; ribosome biogenesis GTP-binding protein YsxC 865713..866366 Clostridiales genomosp. BVAB3 str. UPII9-5 8810621 YP_003475209.1 CDS HMPREF0868_0896 NC_013895.2 866446 869244 D identified by match to protein family HMM PF00753; match to protein family HMM PF03772; match to protein family HMM TIGR00360; match to protein family HMM TIGR00361; DNA internalization competence protein ComEC/Rec2-like protein 866446..869244 Clostridiales genomosp. BVAB3 str. UPII9-5 8810288 YP_003475208.1 CDS holA NC_013895.2 869391 870431 D identified by match to protein family HMM PF06144; match to protein family HMM TIGR01128; DNA polymerase III subunit delta 869391..870431 Clostridiales genomosp. BVAB3 str. UPII9-5 8810726 YP_003475207.1 CDS pflB NC_013895.2 870559 872811 D identified by match to protein family HMM PF01228; match to protein family HMM PF02901; match to protein family HMM TIGR01255; formate C-acetyltransferase 870559..872811 Clostridiales genomosp. BVAB3 str. UPII9-5 8811379 YP_003475206.1 CDS pflA NC_013895.2 872928 874439 D identified by match to protein family HMM PF00027; match to protein family HMM PF00325; match to protein family HMM PF04055; match to protein family HMM TIGR02493; pyruvate formate-lyase 1-activating enzyme 872928..874439 Clostridiales genomosp. BVAB3 str. UPII9-5 8810722 YP_003475205.1 CDS HMPREF0868_0892 NC_013895.2 874509 875051 D identified by match to protein family HMM PF02810; hypothetical protein 874509..875051 Clostridiales genomosp. BVAB3 str. UPII9-5 8811344 YP_003475204.1 CDS asnS NC_013895.2 875190 876584 D identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00457; asparagine--tRNA ligase 875190..876584 Clostridiales genomosp. BVAB3 str. UPII9-5 8810900 YP_003475203.1 CDS HMPREF0868_0890 NC_013895.2 876622 876744 D hypothetical protein 876622..876744 Clostridiales genomosp. BVAB3 str. UPII9-5 8810029 YP_003475202.1 CDS radC NC_013895.2 876789 877508 D identified by match to protein family HMM PF04002; match to protein family HMM TIGR00608; DNA repair protein RadC 876789..877508 Clostridiales genomosp. BVAB3 str. UPII9-5 8810272 YP_003475201.1 CDS asd NC_013895.2 877640 878725 R identified by match to protein family HMM PF01118; match to protein family HMM PF02774; match to protein family HMM TIGR00978; aspartate-semialdehyde dehydrogenase complement(877640..878725) Clostridiales genomosp. BVAB3 str. UPII9-5 8810910 YP_003475200.1 CDS xerC NC_013895.2 878827 879927 D identified by match to protein family HMM PF00589; match to protein family HMM PF02899; site-specific tyrosine recombinase XerC 878827..879927 Clostridiales genomosp. BVAB3 str. UPII9-5 8810455 YP_003475199.1 CDS HMPREF0868_0886 NC_013895.2 880307 880603 R hypothetical protein complement(880307..880603) Clostridiales genomosp. BVAB3 str. UPII9-5 8809956 YP_003475198.1 CDS miaA NC_013895.2 880671 881642 R identified by match to protein family HMM PF01715; match to protein family HMM TIGR00174; tRNA dimethylallyltransferase complement(880671..881642) Clostridiales genomosp. BVAB3 str. UPII9-5 8811110 YP_003475197.1 CDS mutL NC_013895.2 881646 883679 R identified by match to protein family HMM PF01119; match to protein family HMM PF08676; match to protein family HMM TIGR00585; DNA mismatch repair protein complement(881646..883679) Clostridiales genomosp. BVAB3 str. UPII9-5 8810858 YP_003475196.1 CDS mutS NC_013895.2 883694 886324 R identified by match to protein family HMM PF00488; match to protein family HMM PF01624; match to protein family HMM PF05188; match to protein family HMM PF05190; match to protein family HMM PF05192; match to protein family HMM TIGR01070; DNA mismatch repair protein MutS complement(883694..886324) Clostridiales genomosp. BVAB3 str. UPII9-5 8809982 YP_003475195.1 CDS miaB NC_013895.2 886324 887781 R identified by match to protein family HMM PF00919; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR01574; tRNA-I(6)A37 thiotransferase enzyme MiaB complement(886324..887781) Clostridiales genomosp. BVAB3 str. UPII9-5 8810641 YP_003475194.1 CDS trmU NC_013895.2 887753 888895 R identified by match to protein family HMM PF01171; match to protein family HMM PF03054; match to protein family HMM TIGR00420; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase complement(887753..888895) Clostridiales genomosp. BVAB3 str. UPII9-5 8811342 YP_003475193.1 CDS HMPREF0868_0880 NC_013895.2 888896 889717 R identified by match to protein family HMM PF00106; short chain dehydrogenase/reductase family oxidoreductase complement(888896..889717) Clostridiales genomosp. BVAB3 str. UPII9-5 8811316 YP_003475192.1 CDS HMPREF0868_0879 NC_013895.2 889840 890616 R identified by match to protein family HMM PF07685; CobB/CobQ-like protein complement(889840..890616) Clostridiales genomosp. BVAB3 str. UPII9-5 8810595 YP_003475191.1 CDS HMPREF0868_0878 NC_013895.2 890613 892154 R identified by match to protein family HMM PF08245; Mur ligase middle domain-containing protein complement(890613..892154) Clostridiales genomosp. BVAB3 str. UPII9-5 8811122 YP_003475190.1 CDS HMPREF0868_0877 NC_013895.2 892215 893000 R SrtB family sortase complement(892215..893000) Clostridiales genomosp. BVAB3 str. UPII9-5 8811556 YP_003475189.1 CDS pnp NC_013895.2 893282 895519 R identified by match to protein family HMM PF00013; match to protein family HMM PF00575; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM PF03726; match to protein family HMM TIGR03591; polyribonucleotide nucleotidyltransferase complement(893282..895519) Clostridiales genomosp. BVAB3 str. UPII9-5 8811397 YP_003475188.1 CDS rpsO NC_013895.2 895699 895962 R identified by match to protein family HMM PF00312; match to protein family HMM TIGR00952; 30S ribosomal protein S15 complement(895699..895962) Clostridiales genomosp. BVAB3 str. UPII9-5 8810519 YP_003475187.1 CDS rpsD NC_013895.2 896044 896655 R identified by match to protein family HMM PF00163; match to protein family HMM PF01479; match to protein family HMM TIGR01017; 30S ribosomal protein S4 complement(896044..896655) Clostridiales genomosp. BVAB3 str. UPII9-5 8810020 YP_003475186.1 CDS HMPREF0868_0872 NC_013895.2 897078 898469 D identified by match to protein family HMM PF00209; sodium:neurotransmitter symporter family protein 897078..898469 Clostridiales genomosp. BVAB3 str. UPII9-5 8811558 YP_003475185.1 CDS HMPREF0868_0870 NC_013895.2 899031 899900 R identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486; YbgI/SA1388 family dinuclear metal center protein complement(899031..899900) Clostridiales genomosp. BVAB3 str. UPII9-5 8810180 YP_003475184.1 CDS HMPREF0868_0869 NC_013895.2 899953 900672 R identified by match to protein family HMM PF04816; hypothetical protein complement(899953..900672) Clostridiales genomosp. BVAB3 str. UPII9-5 8810867 YP_003475183.1 CDS rpoD NC_013895.2 900672 901733 R identified by match to protein family HMM PF00140; match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF04967; match to protein family HMM TIGR02393; match to protein family HMM TIGR02937; RNA polymerase sigma factor RpoD complement(900672..901733) Clostridiales genomosp. BVAB3 str. UPII9-5 8810454 YP_003475182.1 CDS dnaG NC_013895.2 901744 903609 R identified by match to protein family HMM PF01751; match to protein family HMM PF01807; match to protein family HMM PF08275; match to protein family HMM TIGR01391; DNA primase complement(901744..903609) Clostridiales genomosp. BVAB3 str. UPII9-5 8811197 YP_003475181.1 CDS HMPREF0868_0866 NC_013895.2 903619 905028 R identified by match to protein family HMM PF04055; match to protein family HMM TIGR03974; six-Cys-in-45 modification radical SAM protein complement(903619..905028) Clostridiales genomosp. BVAB3 str. UPII9-5 8810652 YP_003475180.1 CDS yajC NC_013895.2 905214 905546 R identified by match to protein family HMM PF02699; match to protein family HMM TIGR00739; preprotein translocase subunit YajC complement(905214..905546) Clostridiales genomosp. BVAB3 str. UPII9-5 8811325 YP_003475179.1 CDS HMPREF0868_0864 NC_013895.2 905648 906121 R hypothetical protein complement(905648..906121) Clostridiales genomosp. BVAB3 str. UPII9-5 8810444 YP_003475178.1 CDS tgt NC_013895.2 906167 907315 R identified by match to protein family HMM PF01702; match to protein family HMM TIGR00430; match to protein family HMM TIGR00449; tRNA-guanine transglycosylase complement(906167..907315) Clostridiales genomosp. BVAB3 str. UPII9-5 8811129 YP_003475177.1 CDS queA NC_013895.2 907332 908381 R identified by match to protein family HMM PF02547; match to protein family HMM TIGR00113; S-adenosylmethionine:tRNA ribosyltransferase-isomerase complement(907332..908381) Clostridiales genomosp. BVAB3 str. UPII9-5 8810184 YP_003475176.1 CDS trmFO NC_013895.2 908368 909750 R identified by match to protein family HMM PF01134; match to protein family HMM TIGR00137; tRNA:M(5)U-54 methyltransferase complement(908368..909750) Clostridiales genomosp. BVAB3 str. UPII9-5 8810783 YP_003475175.1 CDS topA NC_013895.2 909743 911959 R identified by match to protein family HMM PF01131; match to protein family HMM PF01396; match to protein family HMM PF01751; match to protein family HMM TIGR01051; DNA topoisomerase I complement(909743..911959) Clostridiales genomosp. BVAB3 str. UPII9-5 8810732 YP_003475174.1 CDS dprA NC_013895.2 911986 913236 R identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732; DNA protecting protein DprA complement(911986..913236) Clostridiales genomosp. BVAB3 str. UPII9-5 8811420 YP_003475173.1 CDS chlI NC_013895.2 913199 914830 R identified by match to protein family HMM PF01078; magnesium chelatase subunit ChlI complement(913199..914830) Clostridiales genomosp. BVAB3 str. UPII9-5 8811377 YP_003475172.1 CDS HMPREF0868_0857 NC_013895.2 914897 915028 D hypothetical protein 914897..915028 Clostridiales genomosp. BVAB3 str. UPII9-5 8810486 YP_003475171.1 CDS ychF NC_013895.2 915078 916172 D identified by match to protein family HMM PF01926; match to protein family HMM PF06071; match to protein family HMM TIGR00092; GTP-binding protein YchF 915078..916172 Clostridiales genomosp. BVAB3 str. UPII9-5 8810267 YP_003475170.1 CDS HMPREF0868_0855 NC_013895.2 916308 916904 R putative lipoprotein complement(916308..916904) Clostridiales genomosp. BVAB3 str. UPII9-5 8810952 YP_003475169.1 CDS coaE NC_013895.2 917014 917640 R identified by match to protein family HMM PF01121; match to protein family HMM TIGR00152; dephospho-CoA kinase complement(917014..917640) Clostridiales genomosp. BVAB3 str. UPII9-5 8810874 YP_003475168.1 CDS polA NC_013895.2 917640 920408 R identified by match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593; DNA-directed DNA polymerase complement(917640..920408) Clostridiales genomosp. BVAB3 str. UPII9-5 8810206 YP_003475167.1 CDS HMPREF0868_0852 NC_013895.2 920428 921129 R identified by match to protein family HMM PF00849; RNA pseudouridine synthase complement(920428..921129) Clostridiales genomosp. BVAB3 str. UPII9-5 8811471 YP_003475166.1 CDS HMPREF0868_0851 NC_013895.2 921120 921995 R hypothetical protein complement(921120..921995) Clostridiales genomosp. BVAB3 str. UPII9-5 8810560 YP_003475165.1 CDS HMPREF0868_0850 NC_013895.2 921995 922720 R identified by match to protein family HMM PF00583; GNAT family acetyltransferase complement(921995..922720) Clostridiales genomosp. BVAB3 str. UPII9-5 8810090 YP_003475164.1 CDS HMPREF0868_0849 NC_013895.2 923014 923646 D hypothetical protein 923014..923646 Clostridiales genomosp. BVAB3 str. UPII9-5 8811557 YP_003475163.1 CDS HMPREF0868_0847 NC_013895.2 924270 925514 R identified by match to protein family HMM PF00365; phosphofructokinase complement(924270..925514) Clostridiales genomosp. BVAB3 str. UPII9-5 8810501 YP_003475161.1 CDS HMPREF0868_0845 NC_013895.2 925822 926520 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; response regulator receiver domain-containing protein 925822..926520 Clostridiales genomosp. BVAB3 str. UPII9-5 8810310 YP_003475160.1 CDS HMPREF0868_0844 NC_013895.2 926576 928453 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF08448; ATPase/histidine kinase/DNA gyrase B/HSP90 domain-containing protein 926576..928453 Clostridiales genomosp. BVAB3 str. UPII9-5 8810999 YP_003475159.1 CDS HMPREF0868_0843 NC_013895.2 928443 929396 D identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; pseudouridylate synthase 928443..929396 Clostridiales genomosp. BVAB3 str. UPII9-5 8811431 YP_003475158.1 CDS HMPREF0868_0842 NC_013895.2 929502 930461 D identified by match to protein family HMM PF00781; match to protein family HMM TIGR00147; lipid kinase YegS/Rv2252/BmrU family protein 929502..930461 Clostridiales genomosp. BVAB3 str. UPII9-5 8810707 YP_003475157.1 CDS HMPREF0868_0841 NC_013895.2 930468 932357 R hypothetical protein complement(930468..932357) Clostridiales genomosp. BVAB3 str. UPII9-5 8810527 YP_003475156.1 CDS HMPREF0868_0840 NC_013895.2 932418 934439 R hypothetical protein complement(932418..934439) Clostridiales genomosp. BVAB3 str. UPII9-5 8811385 YP_003475155.1 CDS HMPREF0868_0839 NC_013895.2 934441 936168 R identified by match to protein family HMM PF01266; FAD dependent oxidoreductase complement(934441..936168) Clostridiales genomosp. BVAB3 str. UPII9-5 8810161 YP_003475154.1 CDS HMPREF0868_0838 NC_013895.2 936238 937968 R identified by match to protein family HMM PF03486; flavoprotein family protein complement(936238..937968) Clostridiales genomosp. BVAB3 str. UPII9-5 8811206 YP_003475153.1 CDS HMPREF0868_0837 NC_013895.2 937975 939153 R hypothetical protein complement(937975..939153) Clostridiales genomosp. BVAB3 str. UPII9-5 8809936 YP_003475152.1 CDS HMPREF0868_0836 NC_013895.2 939205 940575 R hypothetical protein complement(939205..940575) Clostridiales genomosp. BVAB3 str. UPII9-5 8811026 YP_003475151.1 CDS HMPREF0868_0835 NC_013895.2 940701 941558 R identified by match to protein family HMM PF01643; acyl-ACP thioesterase complement(940701..941558) Clostridiales genomosp. BVAB3 str. UPII9-5 8810733 YP_003475150.1 CDS groL NC_013895.2 941799 943430 R identified by match to protein family HMM PF00118; match to protein family HMM TIGR02348; chaperonin GroL complement(941799..943430) Clostridiales genomosp. BVAB3 str. UPII9-5 8810845 YP_003475149.1 CDS groS NC_013895.2 943442 943726 R identified by match to protein family HMM PF00166; chaperonin GroS complement(943442..943726) Clostridiales genomosp. BVAB3 str. UPII9-5 8810520 YP_003475148.1 CDS HMPREF0868_0832 NC_013895.2 943990 945870 R identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350; putative transcriptional regulator complement(943990..945870) Clostridiales genomosp. BVAB3 str. UPII9-5 8811506 YP_003475147.1 CDS HMPREF0868_0831 NC_013895.2 945995 946627 R identified by match to protein family HMM PF01865; hypothetical protein complement(945995..946627) Clostridiales genomosp. BVAB3 str. UPII9-5 8810106 YP_003475146.1 CDS HMPREF0868_0830 NC_013895.2 946660 947670 R identified by match to protein family HMM PF01384; phosphate transporter family protein complement(946660..947670) Clostridiales genomosp. BVAB3 str. UPII9-5 8810771 YP_003475145.1 CDS HMPREF0868_0829 NC_013895.2 947683 948585 R identified by match to protein family HMM PF00398; putative dimethyladenosine transferase complement(947683..948585) Clostridiales genomosp. BVAB3 str. UPII9-5 8810271 YP_003475144.1 CDS HMPREF0868_0828 NC_013895.2 948621 950783 R hypothetical protein complement(948621..950783) Clostridiales genomosp. BVAB3 str. UPII9-5 8810965 YP_003475143.1 CDS pgi NC_013895.2 950773 952116 R identified by match to protein family HMM PF00342; glucose-6-phosphate isomerase complement(950773..952116) Clostridiales genomosp. BVAB3 str. UPII9-5 8810873 YP_003475142.1 CDS leuB NC_013895.2 952192 953313 R identified by match to protein family HMM PF00180; match to protein family HMM TIGR00169; 3-isopropylmalate dehydrogenase complement(952192..953313) Clostridiales genomosp. BVAB3 str. UPII9-5 8810626 YP_003475141.1 CDS HMPREF0868_0825 NC_013895.2 953518 955518 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 953518..955518 Clostridiales genomosp. BVAB3 str. UPII9-5 8811131 YP_003475140.1 CDS HMPREF0868_0824 NC_013895.2 955659 956495 R identified by match to protein family HMM PF00160; peptidyl-prolyl cis-trans isomerase, cyclophilin-type complement(955659..956495) Clostridiales genomosp. BVAB3 str. UPII9-5 8810686 YP_003475139.1 CDS HMPREF0868_0823 NC_013895.2 956657 957982 D identified by match to protein family HMM PF03051; putative aminopeptidase C 956657..957982 Clostridiales genomosp. BVAB3 str. UPII9-5 8810006 YP_003475138.1 CDS HMPREF0868_0822 NC_013895.2 958184 959092 R hypothetical protein complement(958184..959092) Clostridiales genomosp. BVAB3 str. UPII9-5 8810947 YP_003475137.1 CDS srtB NC_013895.2 959089 960057 R identified by match to protein family HMM PF07170; match to protein family HMM TIGR03064; SrtB family sortase complement(959089..960057) Clostridiales genomosp. BVAB3 str. UPII9-5 8810227 YP_003475136.1 CDS HMPREF0868_0820 NC_013895.2 960123 961346 R hypothetical protein complement(960123..961346) Clostridiales genomosp. BVAB3 str. UPII9-5 8811088 YP_003475135.1 CDS lepB_1 NC_013895.2 961428 962318 R identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; signal peptidase I complement(961428..962318) Clostridiales genomosp. BVAB3 str. UPII9-5 8810511 YP_003475134.1 CDS HMPREF0868_0818 NC_013895.2 962352 964805 R hypothetical protein complement(962352..964805) Clostridiales genomosp. BVAB3 str. UPII9-5 8811236 YP_003475133.1 CDS HMPREF0868_0817 NC_013895.2 965146 966633 R identified by match to protein family HMM PF08903; hypothetical protein complement(965146..966633) Clostridiales genomosp. BVAB3 str. UPII9-5 8810543 YP_003475132.1 CDS HMPREF0868_0816 NC_013895.2 966705 967826 R identified by match to protein family HMM PF01522; polysaccharide deacetylase complement(966705..967826) Clostridiales genomosp. BVAB3 str. UPII9-5 8810004 YP_003475131.1 CDS HMPREF0868_0815 NC_013895.2 968031 968516 R hypothetical protein complement(968031..968516) Clostridiales genomosp. BVAB3 str. UPII9-5 8811133 YP_003475130.1 CDS HMPREF0868_0814 NC_013895.2 968899 969867 R identified by match to protein family HMM PF00294; putative fructokinase complement(968899..969867) Clostridiales genomosp. BVAB3 str. UPII9-5 8810277 YP_003475129.1 CDS pgmB NC_013895.2 970148 970783 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01990; match to protein family HMM TIGR02009; beta-phosphoglucomutase complement(970148..970783) Clostridiales genomosp. BVAB3 str. UPII9-5 8810404 YP_003475128.1 CDS HMPREF0868_0812 NC_013895.2 970822 972801 R identified by match to protein family HMM PF01055; glycosyl hydrolase family 31 protein complement(970822..972801) Clostridiales genomosp. BVAB3 str. UPII9-5 8811302 YP_003475127.1 CDS HMPREF0868_0811 NC_013895.2 972808 973668 R identified by match to protein family HMM PF00528; ABC transporter permease complement(972808..973668) Clostridiales genomosp. BVAB3 str. UPII9-5 8810043 YP_003475126.1 CDS HMPREF0868_0810 NC_013895.2 973661 974581 R identified by match to protein family HMM PF00528; ABC transporter permease complement(973661..974581) Clostridiales genomosp. BVAB3 str. UPII9-5 8810855 YP_003475125.1 CDS HMPREF0868_0809 NC_013895.2 974645 975973 R identified by match to protein family HMM PF01547; extracellular solute-binding protein complement(974645..975973) Clostridiales genomosp. BVAB3 str. UPII9-5 8809990 YP_003475124.1 CDS HMPREF0868_0808 NC_013895.2 976109 977140 R identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator complement(976109..977140) Clostridiales genomosp. BVAB3 str. UPII9-5 8810700 YP_003475123.1 CDS HMPREF0868_0807 NC_013895.2 977368 979155 D identified by match to protein family HMM PF06824; hypothetical protein 977368..979155 Clostridiales genomosp. BVAB3 str. UPII9-5 8810293 YP_003475122.1 CDS HMPREF0868_0806 NC_013895.2 979175 981313 D identified by match to protein family HMM PF03632; match to protein family HMM PF03636; glycosyl hydrolase family 65 central catalytic domain-containing protein 979175..981313 Clostridiales genomosp. BVAB3 str. UPII9-5 8810566 YP_003475121.1 CDS HMPREF0868_0805 NC_013895.2 982005 982145 D hypothetical protein 982005..982145 Clostridiales genomosp. BVAB3 str. UPII9-5 8811531 YP_003475120.1 CDS folA NC_013895.2 982320 982850 R identified by match to protein family HMM PF00186; dihydrofolate reductase complement(982320..982850) Clostridiales genomosp. BVAB3 str. UPII9-5 8810781 YP_003475119.1 CDS thyA NC_013895.2 982910 983740 R identified by match to protein family HMM PF00303; match to protein family HMM TIGR03284; thymidylate synthase complement(982910..983740) Clostridiales genomosp. BVAB3 str. UPII9-5 8810093 YP_003475118.1 CDS HMPREF0868_0801 NC_013895.2 983854 984759 R identified by match to protein family HMM PF00633; match to protein family HMM TIGR00426; comEA protein complement(983854..984759) Clostridiales genomosp. BVAB3 str. UPII9-5 8811181 YP_003475117.1 CDS HMPREF0868_0800 NC_013895.2 984894 985235 R identified by match to protein family HMM PF02410; match to protein family HMM TIGR00090; iojap-like protein complement(984894..985235) Clostridiales genomosp. BVAB3 str. UPII9-5 8811119 YP_003475116.1 CDS nadD NC_013895.2 985423 986706 R identified by match to protein family HMM PF01467; match to protein family HMM PF01966; match to protein family HMM TIGR00125; match to protein family HMM TIGR00482; match to protein family HMM TIGR00488; nicotinate-nucleotide adenylyltransferase complement(985423..986706) Clostridiales genomosp. BVAB3 str. UPII9-5 8811470 YP_003475115.1 CDS HMPREF0868_0798 NC_013895.2 986699 988102 R identified by match to protein family HMM PF01969; match to protein family HMM TIGR00299; hypothetical protein complement(986699..988102) Clostridiales genomosp. BVAB3 str. UPII9-5 8810567 YP_003475114.1 CDS HMPREF0868_0797 NC_013895.2 988104 988943 R AIR carboxylase family protein complement(988104..988943) Clostridiales genomosp. BVAB3 str. UPII9-5 8810809 YP_003475113.1 CDS prfB NC_013895.2 989072 990181 R identified by match to protein family HMM PF00472; match to protein family HMM PF03462; match to protein family HMM TIGR00020; peptide chain release factor 2 complement(989072..990181) Clostridiales genomosp. BVAB3 str. UPII9-5 8810235 YP_003475112.1 CDS HMPREF0868_0795 NC_013895.2 990187 991365 R identified by match to protein family HMM PF00155; putative aspartate transaminase complement(990187..991365) Clostridiales genomosp. BVAB3 str. UPII9-5 8810588 YP_003475111.1 CDS HMPREF0868_0794 NC_013895.2 991362 991844 R identified by match to protein family HMM PF01037; AsnC family transcriptional regulator complement(991362..991844) Clostridiales genomosp. BVAB3 str. UPII9-5 8810109 YP_003475110.1 CDS HMPREF0868_0793 NC_013895.2 991886 992950 R hypothetical protein complement(991886..992950) Clostridiales genomosp. BVAB3 str. UPII9-5 8811217 YP_003475109.1 CDS rdgB NC_013895.2 993121 993720 R identified by match to protein family HMM PF01725; match to protein family HMM TIGR00042; non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family complement(993121..993720) Clostridiales genomosp. BVAB3 str. UPII9-5 8810503 YP_003475108.1 CDS HMPREF0868_0791 NC_013895.2 993671 995392 R identified by match to protein family HMM PF01189; putative ribosomal RNA small subunit methyltransferase F complement(993671..995392) Clostridiales genomosp. BVAB3 str. UPII9-5 8811196 YP_003475107.1 CDS HMPREF0868_0790 NC_013895.2 995392 996963 R hypothetical protein complement(995392..996963) Clostridiales genomosp. BVAB3 str. UPII9-5 8810524 YP_003475106.1 CDS argS NC_013895.2 996963 998699 R identified by match to protein family HMM PF00750; match to protein family HMM PF03485; match to protein family HMM PF05746; match to protein family HMM TIGR00456; arginine--tRNA ligase complement(996963..998699) Clostridiales genomosp. BVAB3 str. UPII9-5 8810974 YP_003475105.1 CDS glgA NC_013895.2 998833 1000284 R identified by match to protein family HMM PF00534; match to protein family HMM PF08323; match to protein family HMM TIGR02095; glycogen/starch synthase, ADP-glucose type complement(998833..1000284) Clostridiales genomosp. BVAB3 str. UPII9-5 8810225 YP_003475104.1 CDS glgD NC_013895.2 1000299 1001405 R identified by match to protein family HMM TIGR02092; glucose-1-phosphate adenylyltransferase subunit GlgD complement(1000299..1001405) Clostridiales genomosp. BVAB3 str. UPII9-5 8810584 YP_003475103.1 CDS glgC NC_013895.2 1001421 1002677 R identified by match to protein family HMM PF00483; match to protein family HMM TIGR02091; glucose-1-phosphate adenylyltransferase complement(1001421..1002677) Clostridiales genomosp. BVAB3 str. UPII9-5 8809964 YP_003475102.1 CDS glgB NC_013895.2 1002725 1004716 R identified by match to protein family HMM PF00128; match to protein family HMM PF02806; match to protein family HMM PF02922; match to protein family HMM TIGR01515; 1,4-alpha-glucan branching enzyme complement(1002725..1004716) Clostridiales genomosp. BVAB3 str. UPII9-5 8810405 YP_003475101.1 CDS HMPREF0868_0784 NC_013895.2 1004835 1005728 R identified by match to protein family HMM PF02588; hypothetical protein complement(1004835..1005728) Clostridiales genomosp. BVAB3 str. UPII9-5 8811378 YP_003475100.1 CDS HMPREF0868_0783 NC_013895.2 1005959 1006390 R identified by match to protein family HMM PF00258; match to protein family HMM TIGR01753; flavodoxin complement(1005959..1006390) Clostridiales genomosp. BVAB3 str. UPII9-5 8810699 YP_003475099.1 CDS HMPREF0868_0782 NC_013895.2 1006430 1006981 R hypothetical protein complement(1006430..1006981) Clostridiales genomosp. BVAB3 str. UPII9-5 8811350 YP_003475098.1 CDS prmA NC_013895.2 1007195 1008238 R identified by match to protein family HMM PF01170; match to protein family HMM PF02475; match to protein family HMM PF05175; match to protein family HMM PF06325; match to protein family HMM PF08241; match to protein family HMM PF08242; match to protein family HMM TIGR00406; 50S ribosomal protein L11 methyltransferase complement(1007195..1008238) Clostridiales genomosp. BVAB3 str. UPII9-5 8810137 YP_003475097.1 CDS dnaJ NC_013895.2 1008274 1009419 R identified by match to protein family HMM PF00226; match to protein family HMM PF00684; match to protein family HMM PF01556; match to protein family HMM TIGR02349; chaperone protein DnaJ complement(1008274..1009419) Clostridiales genomosp. BVAB3 str. UPII9-5 8811043 YP_003475096.1 CDS dnaK NC_013895.2 1009439 1011280 R identified by match to protein family HMM PF00012; match to protein family HMM TIGR02350; chaperone protein DnaK complement(1009439..1011280) Clostridiales genomosp. BVAB3 str. UPII9-5 8810014 YP_003475095.1 CDS grpE NC_013895.2 1011387 1012067 R identified by match to protein family HMM PF01025; co-chaperone GrpE complement(1011387..1012067) Clostridiales genomosp. BVAB3 str. UPII9-5 8810917 YP_003475094.1 CDS hrcA NC_013895.2 1012057 1013139 R identified by match to protein family HMM PF01628; match to protein family HMM TIGR00331; heat-inducible transcription repressor HrcA complement(1012057..1013139) Clostridiales genomosp. BVAB3 str. UPII9-5 8811341 YP_003475093.1 CDS HMPREF0868_0776 NC_013895.2 1013254 1014519 R identified by match to protein family HMM PF04055; match to protein family HMM PF06969; match to protein family HMM TIGR00539; putative oxygen-independent coproporphyrinogen III oxidase complement(1013254..1014519) Clostridiales genomosp. BVAB3 str. UPII9-5 8810681 YP_003475092.1 CDS HMPREF0868_0775 NC_013895.2 1014512 1015228 R hypothetical protein complement(1014512..1015228) Clostridiales genomosp. BVAB3 str. UPII9-5 8811220 YP_003475091.1 CDS HMPREF0868_0774 NC_013895.2 1015239 1016543 R hypothetical protein complement(1015239..1016543) Clostridiales genomosp. BVAB3 str. UPII9-5 8810145 YP_003475090.1 CDS HMPREF0868_0773 NC_013895.2 1016611 1017582 R identified by match to protein family HMM PF01145; SPFH/Band 7/PHB domain-containing protein complement(1016611..1017582) Clostridiales genomosp. BVAB3 str. UPII9-5 8810606 YP_003475089.1 CDS nfeD NC_013895.2 1017658 1018149 R identified by match to protein family HMM PF01957; nodulation efficiency protein D complement(1017658..1018149) Clostridiales genomosp. BVAB3 str. UPII9-5 8810915 YP_003475088.1 CDS HMPREF0868_0771 NC_013895.2 1018164 1019354 R identified by match to protein family HMM PF04389; M28 family peptidase complement(1018164..1019354) Clostridiales genomosp. BVAB3 str. UPII9-5 8810231 YP_003475087.1 CDS HMPREF0868_0770 NC_013895.2 1019525 1020040 R hypothetical protein complement(1019525..1020040) Clostridiales genomosp. BVAB3 str. UPII9-5 8811058 YP_003475086.1 CDS HMPREF0868_0769 NC_013895.2 1020034 1020483 R identified by match to protein family HMM PF00226; DnaJ domain-containing protein complement(1020034..1020483) Clostridiales genomosp. BVAB3 str. UPII9-5 8811290 YP_003475085.1 CDS fhs NC_013895.2 1020794 1022467 D identified by match to protein family HMM PF01268; formate--tetrahydrofolate ligase 1020794..1022467 Clostridiales genomosp. BVAB3 str. UPII9-5 8810592 YP_003475084.1 CDS HMPREF0868_0767 NC_013895.2 1022499 1023401 R hypothetical protein complement(1022499..1023401) Clostridiales genomosp. BVAB3 str. UPII9-5 8811501 YP_003475083.1 CDS gltX NC_013895.2 1023585 1025045 D identified by match to protein family HMM PF00749; match to protein family HMM TIGR00464; glutamate--tRNA ligase 1023585..1025045 Clostridiales genomosp. BVAB3 str. UPII9-5 8809991 YP_003475082.1 CDS glnS NC_013895.2 1025047 1026768 D identified by match to protein family HMM PF00749; match to protein family HMM PF03950; match to protein family HMM TIGR00440; glutamine--tRNA ligase 1025047..1026768 Clostridiales genomosp. BVAB3 str. UPII9-5 8810876 YP_003475081.1 CDS HMPREF0868_0764 NC_013895.2 1027005 1028774 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein complement(1027005..1028774) Clostridiales genomosp. BVAB3 str. UPII9-5 8810202 YP_003475080.1 CDS HMPREF0868_0763 NC_013895.2 1028771 1030504 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein complement(1028771..1030504) Clostridiales genomosp. BVAB3 str. UPII9-5 8810981 YP_003475079.1 CDS HMPREF0868_0762 NC_013895.2 1030553 1030807 R hypothetical protein complement(1030553..1030807) Clostridiales genomosp. BVAB3 str. UPII9-5 8810287 YP_003475078.1 CDS HMPREF0868_0761 NC_013895.2 1030981 1032348 R identified by match to protein family HMM PF00089; match to protein family HMM PF00595; trypsin complement(1030981..1032348) Clostridiales genomosp. BVAB3 str. UPII9-5 8810802 YP_003475077.1 CDS HMPREF0868_0760 NC_013895.2 1032475 1032885 R hypothetical protein complement(1032475..1032885) Clostridiales genomosp. BVAB3 str. UPII9-5 8810113 YP_003475076.1 CDS psd NC_013895.2 1033065 1033700 D identified by match to protein family HMM PF02666; match to protein family HMM TIGR00164; phosphatidylserine decarboxylase 1033065..1033700 Clostridiales genomosp. BVAB3 str. UPII9-5 8810754 YP_003475075.1 CDS pssA NC_013895.2 1033704 1034276 D identified by match to protein family HMM PF01066; match to protein family HMM TIGR00473; CDP-diacylglycerol-serine O-phosphatidyltransferase 1033704..1034276 Clostridiales genomosp. BVAB3 str. UPII9-5 8810060 YP_003475074.1 CDS pyk NC_013895.2 1034455 1036194 R identified by match to protein family HMM PF00224; match to protein family HMM PF00391; match to protein family HMM PF02887; match to protein family HMM TIGR01064; pyruvate kinase complement(1034455..1036194) Clostridiales genomosp. BVAB3 str. UPII9-5 8811408 YP_003475073.1 CDS HMPREF0868_0756 NC_013895.2 1036300 1036893 R hypothetical protein complement(1036300..1036893) Clostridiales genomosp. BVAB3 str. UPII9-5 8810717 YP_003475072.1 CDS HMPREF0868_0755 NC_013895.2 1036926 1037519 R identified by match to protein family HMM PF02417; overlaps another CDS with the same product name; chromate transport protein complement(1036926..1037519) Clostridiales genomosp. BVAB3 str. UPII9-5 8810265 YP_003475071.1 CDS HMPREF0868_0754 NC_013895.2 1037516 1038100 R identified by match to protein family HMM PF02417; overlaps another CDS with the same product name; chromate transport protein complement(1037516..1038100) Clostridiales genomosp. BVAB3 str. UPII9-5 8810507 YP_003475070.1 CDS HMPREF0868_0753 NC_013895.2 1038104 1038583 R identified by match to protein family HMM PF00293; putative mutator MutT protein complement(1038104..1038583) Clostridiales genomosp. BVAB3 str. UPII9-5 8810198 YP_003475069.1 CDS HMPREF0868_0752 NC_013895.2 1038705 1039889 R identified by match to protein family HMM PF00390; match to protein family HMM PF03949; malic enzyme, NAD binding domain-containing protein complement(1038705..1039889) Clostridiales genomosp. BVAB3 str. UPII9-5 8810741 YP_003475068.1 CDS HMPREF0868_0751 NC_013895.2 1040077 1041408 R identified by match to protein family HMM PF03390; putative citrate-sodium symporter complement(1040077..1041408) Clostridiales genomosp. BVAB3 str. UPII9-5 8810946 YP_003475067.1 CDS HMPREF0868_0750 NC_013895.2 1041779 1043182 R identified by match to protein family HMM PF01594; hypothetical protein complement(1041779..1043182) Clostridiales genomosp. BVAB3 str. UPII9-5 8810201 YP_003475066.1 CDS HMPREF0868_0749 NC_013895.2 1043344 1044672 D hypothetical protein 1043344..1044672 Clostridiales genomosp. BVAB3 str. UPII9-5 8811551 YP_003475065.1 CDS HMPREF0868_0746 NC_013895.2 1045028 1047757 R hypothetical protein complement(1045028..1047757) Clostridiales genomosp. BVAB3 str. UPII9-5 8810841 YP_003475064.1 CDS HMPREF0868_0745 NC_013895.2 1047918 1048841 R identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; TrmH family RNA methyltransferase complement(1047918..1048841) Clostridiales genomosp. BVAB3 str. UPII9-5 8809939 YP_003475063.1 CDS HMPREF0868_0744 NC_013895.2 1048903 1049406 R identified by match to protein family HMM PF00636; RNase3 domain-containing protein complement(1048903..1049406) Clostridiales genomosp. BVAB3 str. UPII9-5 8811054 YP_003475062.1 CDS cysS NC_013895.2 1049399 1050820 R identified by match to protein family HMM PF01406; match to protein family HMM PF09190; match to protein family HMM PF09334; match to protein family HMM TIGR00435; cysteine--tRNA ligase complement(1049399..1050820) Clostridiales genomosp. BVAB3 str. UPII9-5 8810213 YP_003475061.2 CDS HMPREF0868_0742 NC_013895.2 1051417 1052829 D identified by match to protein family HMM PF00392; GntR family transcriptional regulator 1051417..1052829 Clostridiales genomosp. BVAB3 str. UPII9-5 8810388 YP_003475060.1 CDS HMPREF0868_0741 NC_013895.2 1052878 1053738 R ComF family protein complement(1052878..1053738) Clostridiales genomosp. BVAB3 str. UPII9-5 8811289 YP_003475059.1 CDS metK NC_013895.2 1053924 1055129 R identified by match to protein family HMM PF00438; match to protein family HMM PF02772; match to protein family HMM PF02773; match to protein family HMM TIGR01034; methionine adenosyltransferase complement(1053924..1055129) Clostridiales genomosp. BVAB3 str. UPII9-5 8810598 YP_003475058.1 CDS thiH NC_013895.2 1055428 1056588 R identified by match to protein family HMM PF04055; match to protein family HMM PF06968; match to protein family HMM TIGR02351; thiazole biosynthesis protein ThiH complement(1055428..1056588) Clostridiales genomosp. BVAB3 str. UPII9-5 8811461 YP_003475057.1 CDS thiG NC_013895.2 1056599 1057360 R identified by match to protein family HMM PF05690; thiazole biosynthesis protein ThiG complement(1056599..1057360) Clostridiales genomosp. BVAB3 str. UPII9-5 8810889 YP_003475056.1 CDS HMPREF0868_0736 NC_013895.2 1057382 1057945 R identified by match to protein family HMM PF00899; putative thiamine biosynthesis protein ThiF complement(1057382..1057945) Clostridiales genomosp. BVAB3 str. UPII9-5 8810583 YP_003475055.2 CDS thiS NC_013895.2 1057968 1058252 R identified by match to protein family HMM PF02597; match to protein family HMM TIGR01683; thiamine biosynthesis protein ThiS complement(1057968..1058252) Clostridiales genomosp. BVAB3 str. UPII9-5 8810813 YP_003475054.1 CDS HMPREF0868_0734 NC_013895.2 1058433 1059572 D hypothetical protein 1058433..1059572 Clostridiales genomosp. BVAB3 str. UPII9-5 8810320 YP_003475053.1 CDS HMPREF0868_0733 NC_013895.2 1059596 1060753 D identified by match to protein family HMM PF00437; type II/IV secretion system protein 1059596..1060753 Clostridiales genomosp. BVAB3 str. UPII9-5 8810237 YP_003475052.1 CDS HMPREF0868_0732 NC_013895.2 1060828 1062465 D hypothetical protein 1060828..1062465 Clostridiales genomosp. BVAB3 str. UPII9-5 8811116 YP_003475051.1 CDS HMPREF0868_0731 NC_013895.2 1062497 1063132 R putative 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(1062497..1063132) Clostridiales genomosp. BVAB3 str. UPII9-5 8810189 YP_003475050.1 CDS HMPREF0868_0730 NC_013895.2 1063133 1064020 R nucleotide-binding family protein complement(1063133..1064020) Clostridiales genomosp. BVAB3 str. UPII9-5 8811309 YP_003475049.1 CDS HMPREF0868_0729 NC_013895.2 1064013 1064651 R identified by match to protein family HMM PF05175; match to protein family HMM PF08241; methyltransferase small domain-containing protein complement(1064013..1064651) Clostridiales genomosp. BVAB3 str. UPII9-5 8811493 YP_003475048.1 CDS lepA NC_013895.2 1064651 1066462 R identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM PF06421; match to protein family HMM TIGR00231; match to protein family HMM TIGR01393; GTP-binding protein LepA complement(1064651..1066462) Clostridiales genomosp. BVAB3 str. UPII9-5 8810574 YP_003475047.1 CDS lepB_2 NC_013895.2 1066459 1067103 R identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; signal peptidase I complement(1066459..1067103) Clostridiales genomosp. BVAB3 str. UPII9-5 8810064 YP_003475046.1 CDS lepB_3 NC_013895.2 1067269 1068564 R identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; signal peptidase I complement(1067269..1068564) Clostridiales genomosp. BVAB3 str. UPII9-5 8810784 YP_003475045.1 CDS aspS NC_013895.2 1068561 1070357 R identified by match to protein family HMM PF00152; match to protein family HMM PF00587; match to protein family HMM PF01336; match to protein family HMM PF02938; match to protein family HMM TIGR00459; aspartate--tRNA ligase complement(1068561..1070357) Clostridiales genomosp. BVAB3 str. UPII9-5 8810786 YP_003475044.1 CDS hisS NC_013895.2 1070441 1071700 R identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM TIGR00442; histidine--tRNA ligase complement(1070441..1071700) Clostridiales genomosp. BVAB3 str. UPII9-5 8810864 YP_003475043.1 CDS HMPREF0868_0723 NC_013895.2 1071747 1072487 R identified by match to protein family HMM PF04452; match to protein family HMM TIGR00046; putative 16S rRNA methyltransferase RsmE complement(1071747..1072487) Clostridiales genomosp. BVAB3 str. UPII9-5 8811356 YP_003475042.1 CDS xth NC_013895.2 1072774 1073529 D identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633; exodeoxyribonuclease III 1072774..1073529 Clostridiales genomosp. BVAB3 str. UPII9-5 8810400 YP_003475041.1 CDS radA NC_013895.2 1073568 1075019 D identified by match to protein family HMM TIGR00416; DNA repair protein RadA 1073568..1075019 Clostridiales genomosp. BVAB3 str. UPII9-5 8810284 YP_003475040.1 CDS HMPREF0868_0720 NC_013895.2 1075032 1075769 D identified by match to protein family HMM PF01128; putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1075032..1075769 Clostridiales genomosp. BVAB3 str. UPII9-5 8810990 YP_003475039.1 CDS HMPREF0868_0719 NC_013895.2 1076049 1077434 D identified by match to protein family HMM PF01554; MATE efflux family protein 1076049..1077434 Clostridiales genomosp. BVAB3 str. UPII9-5 8810119 YP_003475038.1 CDS pyrE NC_013895.2 1077544 1078176 R identified by match to protein family HMM PF00156; match to protein family HMM TIGR00336; orotate phosphoribosyltransferase complement(1077544..1078176) Clostridiales genomosp. BVAB3 str. UPII9-5 8810750 YP_003475037.1 CDS pyrF NC_013895.2 1078299 1078988 R identified by match to protein family HMM PF00215; match to protein family HMM TIGR01740; orotidine 5'-phosphate decarboxylase complement(1078299..1078988) Clostridiales genomosp. BVAB3 str. UPII9-5 8811336 YP_003475036.1 CDS pyrD NC_013895.2 1079051 1080001 R identified by match to protein family HMM PF01180; match to protein family HMM TIGR01037; dihydroorotate oxidase catalytic subunit complement(1079051..1080001) Clostridiales genomosp. BVAB3 str. UPII9-5 8810222 YP_003475035.1 CDS HMPREF0868_0715 NC_013895.2 1079991 1080821 R identified by match to protein family HMM PF00175; putative dihydroorotate oxidase, electron transfer subunit complement(1079991..1080821) Clostridiales genomosp. BVAB3 str. UPII9-5 8810359 YP_003475034.1 CDS HMPREF0868_0714 NC_013895.2 1080864 1082189 R identified by match to protein family HMM PF01979; match to protein family HMM PF07969; match to protein family HMM TIGR00857; putative dihydroorotase complement(1080864..1082189) Clostridiales genomosp. BVAB3 str. UPII9-5 8811260 YP_003475033.1 CDS HMPREF0868_0713 NC_013895.2 1082186 1082377 R hypothetical protein complement(1082186..1082377) Clostridiales genomosp. BVAB3 str. UPII9-5 8810843 YP_003475032.1 CDS HMPREF0868_0712 NC_013895.2 1082488 1082667 R hypothetical protein complement(1082488..1082667) Clostridiales genomosp. BVAB3 str. UPII9-5 8810182 YP_003475031.1 CDS HMPREF0868_0711 NC_013895.2 1082759 1082932 D hypothetical protein 1082759..1082932 Clostridiales genomosp. BVAB3 str. UPII9-5 8811235 YP_003475030.1 CDS HMPREF0868_0710 NC_013895.2 1082934 1084421 D hypothetical protein 1082934..1084421 Clostridiales genomosp. BVAB3 str. UPII9-5 8810630 YP_003475029.1 CDS upp NC_013895.2 1084574 1085203 R identified by match to protein family HMM PF00156; match to protein family HMM TIGR01091; uracil phosphoribosyltransferase complement(1084574..1085203) Clostridiales genomosp. BVAB3 str. UPII9-5 8810406 YP_003475028.1 CDS HMPREF0868_0708 NC_013895.2 1085437 1086177 R identified by match to protein family HMM PF00483; nucleotidyl transferase complement(1085437..1086177) Clostridiales genomosp. BVAB3 str. UPII9-5 8811291 YP_003475027.1 CDS HMPREF0868_0707 NC_013895.2 1086177 1087469 R identified by match to protein family HMM PF01170; hypothetical protein complement(1086177..1087469) Clostridiales genomosp. BVAB3 str. UPII9-5 8811049 YP_003475026.1 CDS HMPREF0868_0706 NC_013895.2 1087921 1088046 R hypothetical protein complement(1087921..1088046) Clostridiales genomosp. BVAB3 str. UPII9-5 8810826 YP_003475025.1 CDS HMPREF0868_0705 NC_013895.2 1088266 1088436 D hypothetical protein 1088266..1088436 Clostridiales genomosp. BVAB3 str. UPII9-5 8811507 YP_003475024.1 CDS mutM NC_013895.2 1088485 1089327 D identified by match to protein family HMM PF01149; match to protein family HMM PF06827; match to protein family HMM PF06831; match to protein family HMM TIGR00577; DNA-formamidopyrimidine glycosylase 1088485..1089327 Clostridiales genomosp. BVAB3 str. UPII9-5 8811065 YP_003475023.1 CDS HMPREF0868_0703 NC_013895.2 1089499 1089978 D hypothetical protein 1089499..1089978 Clostridiales genomosp. BVAB3 str. UPII9-5 8810061 YP_003475022.1 CDS HMPREF0868_0702 NC_013895.2 1090108 1091505 D identified by match to protein family HMM PF02127; aminopeptidase I zinc metalloprotease (M18) 1090108..1091505 Clostridiales genomosp. BVAB3 str. UPII9-5 8811538 YP_003475021.1 CDS hup NC_013895.2 1091750 1092025 D identified by match to protein family HMM PF00216; DNA-binding protein HU 1091750..1092025 Clostridiales genomosp. BVAB3 str. UPII9-5 8810439 YP_003475020.1 CDS HMPREF0868_0699 NC_013895.2 1092143 1092586 D hypothetical protein 1092143..1092586 Clostridiales genomosp. BVAB3 str. UPII9-5 8811150 YP_003475019.1 CDS HMPREF0868_0698 NC_013895.2 1092649 1093098 D identified by match to protein family HMM PF00383; cytidine and deoxycytidylate deaminase zinc-binding region 1092649..1093098 Clostridiales genomosp. BVAB3 str. UPII9-5 8810628 YP_003475018.1 CDS mscL NC_013895.2 1093112 1093528 D identified by match to protein family HMM PF01741; match to protein family HMM TIGR00220; large conductance mechanosensitive channel protein 1093112..1093528 Clostridiales genomosp. BVAB3 str. UPII9-5 8810129 YP_003475017.1 CDS HMPREF0868_0696 NC_013895.2 1093622 1094185 D hypothetical protein 1093622..1094185 Clostridiales genomosp. BVAB3 str. UPII9-5 8810853 YP_003475016.1 CDS HMPREF0868_0695 NC_013895.2 1094457 1095656 R identified by match to protein family HMM PF00753; putative type A flavoprotein FprA complement(1094457..1095656) Clostridiales genomosp. BVAB3 str. UPII9-5 8810329 YP_003475015.1 CDS HMPREF0868_0694 NC_013895.2 1095864 1096019 R hypothetical protein complement(1095864..1096019) Clostridiales genomosp. BVAB3 str. UPII9-5 8811084 YP_003475014.1 CDS HMPREF0868_0693 NC_013895.2 1096050 1096211 R identified by match to protein family HMM PF00301; rubredoxin complement(1096050..1096211) Clostridiales genomosp. BVAB3 str. UPII9-5 8810009 YP_003475013.1 CDS HMPREF0868_0692 NC_013895.2 1096635 1096937 R identified by match to protein family HMM PF01985; YhbY family RNA-binding protein complement(1096635..1096937) Clostridiales genomosp. BVAB3 str. UPII9-5 8811376 YP_003475012.1 CDS cgtA NC_013895.2 1097019 1098287 R identified by match to protein family HMM PF01018; match to protein family HMM PF01926; match to protein family HMM PF09269; match to protein family HMM TIGR02729; match to protein family HMM TIGR03595; Obg family GTPase CgtA complement(1097019..1098287) Clostridiales genomosp. BVAB3 str. UPII9-5 8810689 YP_003475011.1 CDS rpmA NC_013895.2 1098420 1098704 R identified by match to protein family HMM PF01016; match to protein family HMM TIGR00062; 50S ribosomal protein L27 complement(1098420..1098704) Clostridiales genomosp. BVAB3 str. UPII9-5 8811228 YP_003475010.1 CDS HMPREF0868_0689 NC_013895.2 1098724 1099056 R identified by match to protein family HMM PF04327; hypothetical protein complement(1098724..1099056) Clostridiales genomosp. BVAB3 str. UPII9-5 8810495 YP_003475009.1 CDS rplU NC_013895.2 1099078 1099386 R identified by match to protein family HMM PF00829; match to protein family HMM TIGR00061; 50S ribosomal protein L21 complement(1099078..1099386) Clostridiales genomosp. BVAB3 str. UPII9-5 8810266 YP_003475008.1 CDS HMPREF0868_0687 NC_013895.2 1099533 1100822 R identified by match to protein family HMM PF00375; putative proton/sodium-glutamate symport protein GltT complement(1099533..1100822) Clostridiales genomosp. BVAB3 str. UPII9-5 8811087 YP_003475007.1 CDS hemZ NC_013895.2 1101110 1102768 R identified by match to protein family HMM PF04055; match to protein family HMM TIGR03994; coproporphyrinogen dehydrogenase HemZ complement(1101110..1102768) Clostridiales genomosp. BVAB3 str. UPII9-5 8810033 YP_003475006.1 CDS HMPREF0868_0685 NC_013895.2 1102776 1103480 R identified by match to protein family HMM PF00702; HAD hydrolase complement(1102776..1103480) Clostridiales genomosp. BVAB3 str. UPII9-5 8811369 YP_003475005.1 CDS HMPREF0868_0684 NC_013895.2 1103477 1104031 R hypothetical protein complement(1103477..1104031) Clostridiales genomosp. BVAB3 str. UPII9-5 8811173 YP_003475004.1 CDS HMPREF0868_0683 NC_013895.2 1104235 1105206 R identified by match to protein family HMM TIGR00044; pyridoxal phosphate enzyme, YggS family complement(1104235..1105206) Clostridiales genomosp. BVAB3 str. UPII9-5 8810337 YP_003475003.1 CDS HMPREF0868_0682 NC_013895.2 1105199 1106899 R hypothetical protein complement(1105199..1106899) Clostridiales genomosp. BVAB3 str. UPII9-5 8811237 YP_003475002.1 CDS HMPREF0868_0681 NC_013895.2 1107013 1108326 R identified by match to protein family HMM PF06838; aluminum resistance protein complement(1107013..1108326) Clostridiales genomosp. BVAB3 str. UPII9-5 8811514 YP_003475001.1 CDS HMPREF0868_0679 NC_013895.2 1108564 1108704 R hypothetical protein complement(1108564..1108704) Clostridiales genomosp. BVAB3 str. UPII9-5 8810803 YP_003475000.1 CDS arcA NC_013895.2 1108674 1109891 R identified by match to protein family HMM PF02274; arginine deiminase complement(1108674..1109891) Clostridiales genomosp. BVAB3 str. UPII9-5 8811067 YP_003474999.1 CDS HMPREF0868_0677 NC_013895.2 1110154 1110579 R identified by match to protein family HMM PF01047; MarR family transcriptional regulator complement(1110154..1110579) Clostridiales genomosp. BVAB3 str. UPII9-5 8810177 YP_003474998.1 CDS HMPREF0868_0676 NC_013895.2 1110851 1112530 R putative lipoprotein complement(1110851..1112530) Clostridiales genomosp. BVAB3 str. UPII9-5 8810528 YP_003474996.1 CDS HMPREF0868_0674 NC_013895.2 1113266 1113706 D identified by match to protein family HMM PF01325; match to protein family HMM PF02742; transcriptional regulator MntR family protein 1113266..1113706 Clostridiales genomosp. BVAB3 str. UPII9-5 8811321 YP_003474995.1 CDS HMPREF0868_0673 NC_013895.2 1113967 1114491 R identified by match to protein family HMM PF00665; putative transposase InsK for insertion sequence IS150 complement(1113967..1114491) Clostridiales genomosp. BVAB3 str. UPII9-5 8810613 YP_003474994.1 CDS HMPREF0868_0672 NC_013895.2 1114515 1115093 R identified by match to protein family HMM PF01527; transposase complement(1114515..1115093) Clostridiales genomosp. BVAB3 str. UPII9-5 8810497 YP_003474993.1 CDS HMPREF0868_0671 NC_013895.2 1115280 1116710 R identified by match to protein family HMM PF02687; efflux ABC transporter permease complement(1115280..1116710) Clostridiales genomosp. BVAB3 str. UPII9-5 8811214 YP_003474992.1 CDS HMPREF0868_0670 NC_013895.2 1116719 1118500 R identified by match to protein family HMM TIGR01167; LPXTG-motif cell wall anchor domain-containing protein complement(1116719..1118500) Clostridiales genomosp. BVAB3 str. UPII9-5 8810710 YP_003474991.1 CDS HMPREF0868_0669 NC_013895.2 1118515 1119336 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(1118515..1119336) Clostridiales genomosp. BVAB3 str. UPII9-5 8810132 YP_003474990.1 CDS HMPREF0868_0668 NC_013895.2 1119585 1120940 R identified by match to protein family HMM PF02447; match to protein family HMM PF03600; gluconate:H+ symporter (GntP) family protein complement(1119585..1120940) Clostridiales genomosp. BVAB3 str. UPII9-5 8809959 YP_003474989.1 CDS dsdA NC_013895.2 1120982 1122325 R identified by match to protein family HMM PF00291; match to protein family HMM TIGR02035; D-serine ammonia-lyase complement(1120982..1122325) Clostridiales genomosp. BVAB3 str. UPII9-5 8811064 YP_003474988.1 CDS ligA NC_013895.2 1122780 1125056 R identified by match to protein family HMM PF00533; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575; DNA ligase (NAD+) complement(1122780..1125056) Clostridiales genomosp. BVAB3 str. UPII9-5 8810147 YP_003474987.1 CDS HMPREF0868_0665 NC_013895.2 1125053 1125301 R hypothetical protein complement(1125053..1125301) Clostridiales genomosp. BVAB3 str. UPII9-5 8811231 YP_003474986.1 CDS HMPREF0868_0664 NC_013895.2 1125346 1126443 D identified by match to protein family HMM PF00149; Ser/Thr phosphatase family protein 1125346..1126443 Clostridiales genomosp. BVAB3 str. UPII9-5 8810557 YP_003474985.1 CDS HMPREF0868_0663 NC_013895.2 1126569 1127495 R identified by match to protein family HMM PF01544; CorA-like protein complement(1126569..1127495) Clostridiales genomosp. BVAB3 str. UPII9-5 8811457 YP_003474984.1 CDS HMPREF0868_0662 NC_013895.2 1127654 1128436 R identified by match to protein family HMM PF00565; nuclease-like protein complement(1127654..1128436) Clostridiales genomosp. BVAB3 str. UPII9-5 8811013 YP_003474983.1 CDS HMPREF0868_0661 NC_013895.2 1128660 1130342 D identified by match to protein family HMM PF01266; match to protein family HMM PF04324; FAD dependent oxidoreductase 1128660..1130342 Clostridiales genomosp. BVAB3 str. UPII9-5 8810300 YP_003474982.1 CDS HMPREF0868_0660 NC_013895.2 1130347 1131168 R identified by match to protein family HMM PF00896; match to protein family HMM TIGR01697; match to protein family HMM TIGR01700; purine nucleoside phosphorylase I, inosine and guanosine-specific complement(1130347..1131168) Clostridiales genomosp. BVAB3 str. UPII9-5 8810724 YP_003474981.1 CDS HMPREF0868_0659 NC_013895.2 1131197 1131925 R identified by match to protein family HMM PF00027; match to protein family HMM PF00325; cyclic nucleotide-binding domain-containing protein complement(1131197..1131925) Clostridiales genomosp. BVAB3 str. UPII9-5 8811213 YP_003474980.1 CDS add NC_013895.2 1131915 1132895 R identified by match to protein family HMM PF00962; match to protein family HMM TIGR01430; adenosine deaminase complement(1131915..1132895) Clostridiales genomosp. BVAB3 str. UPII9-5 8810857 YP_003474979.1 CDS HMPREF0868_0657 NC_013895.2 1133045 1134178 R identified by match to protein family HMM PF02608; basic membrane protein complement(1133045..1134178) Clostridiales genomosp. BVAB3 str. UPII9-5 8810692 YP_003474978.1 CDS deoC NC_013895.2 1134234 1134887 R identified by match to protein family HMM PF01791; match to protein family HMM TIGR00126; deoxyribose-phosphate aldolase complement(1134234..1134887) Clostridiales genomosp. BVAB3 str. UPII9-5 8811025 YP_003474977.1 CDS pyn NC_013895.2 1134957 1136288 R identified by match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM PF07831; match to protein family HMM TIGR02644; pyrimidine-nucleoside phosphorylase complement(1134957..1136288) Clostridiales genomosp. BVAB3 str. UPII9-5 8809951 YP_003474976.1 CDS HMPREF0868_0654 NC_013895.2 1136395 1137348 R identified by match to protein family HMM PF02653; branched-chain amino acid ABC transporter permease complement(1136395..1137348) Clostridiales genomosp. BVAB3 str. UPII9-5 8810302 YP_003474975.1 CDS HMPREF0868_0653 NC_013895.2 1137350 1138492 R identified by match to protein family HMM PF02653; branched-chain amino acid ABC transporter permease complement(1137350..1138492) Clostridiales genomosp. BVAB3 str. UPII9-5 8811019 YP_003474974.1 CDS HMPREF0868_0652 NC_013895.2 1138482 1140014 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(1138482..1140014) Clostridiales genomosp. BVAB3 str. UPII9-5 8810678 YP_003474973.1 CDS cdd NC_013895.2 1140045 1140455 R identified by match to protein family HMM PF00383; match to protein family HMM PF08211; match to protein family HMM TIGR01354; cytidine deaminase complement(1140045..1140455) Clostridiales genomosp. BVAB3 str. UPII9-5 8809973 YP_003474972.1 CDS coaBC NC_013895.2 1140723 1141934 R identified by match to protein family HMM PF02441; match to protein family HMM PF04127; match to protein family HMM TIGR00521; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase complement(1140723..1141934) Clostridiales genomosp. BVAB3 str. UPII9-5 8810438 YP_003474971.1 CDS valS NC_013895.2 1142000 1144657 R identified by match to protein family HMM PF00133; match to protein family HMM PF08264; match to protein family HMM PF09334; match to protein family HMM TIGR00422; valine--tRNA ligase complement(1142000..1144657) Clostridiales genomosp. BVAB3 str. UPII9-5 8811363 YP_003474970.1 CDS HMPREF0868_0648 NC_013895.2 1144701 1144958 R hypothetical protein complement(1144701..1144958) Clostridiales genomosp. BVAB3 str. UPII9-5 8811246 YP_003474969.1 CDS HMPREF0868_0647 NC_013895.2 1144946 1145833 R identified by match to protein family HMM PF00459; inositol monophosphatase family protein complement(1144946..1145833) Clostridiales genomosp. BVAB3 str. UPII9-5 8811226 YP_003474968.1 CDS ftsY NC_013895.2 1145886 1146800 R identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM TIGR00064; signal recognition particle-docking protein FtsY complement(1145886..1146800) Clostridiales genomosp. BVAB3 str. UPII9-5 8810084 YP_003474967.1 CDS smc NC_013895.2 1146887 1150480 R identified by match to protein family HMM PF02463; match to protein family HMM PF06470; match to protein family HMM TIGR02168; chromosome segregation protein SMC complement(1146887..1150480) Clostridiales genomosp. BVAB3 str. UPII9-5 8810980 YP_003474966.1 CDS rnc NC_013895.2 1150471 1151208 R identified by match to protein family HMM PF00035; match to protein family HMM PF00636; match to protein family HMM TIGR02191; ribonuclease III complement(1150471..1151208) Clostridiales genomosp. BVAB3 str. UPII9-5 8810030 YP_003474965.1 CDS HMPREF0868_0643 NC_013895.2 1151226 1151459 R hypothetical protein complement(1151226..1151459) Clostridiales genomosp. BVAB3 str. UPII9-5 8810728 YP_003474964.1 CDS HMPREF0868_0642 NC_013895.2 1151452 1153020 R identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; ABC transporter ATP-binding protein complement(1151452..1153020) Clostridiales genomosp. BVAB3 str. UPII9-5 8810478 YP_003474963.1 CDS HMPREF0868_0641 NC_013895.2 1153013 1153999 R identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; ABC transporter ATP-binding protein complement(1153013..1153999) Clostridiales genomosp. BVAB3 str. UPII9-5 8811142 YP_003474962.1 CDS HMPREF0868_0640 NC_013895.2 1154010 1155818 R identified by match to protein family HMM PF00528; putative oligopeptide ABC transporter permease AppC complement(1154010..1155818) Clostridiales genomosp. BVAB3 str. UPII9-5 8810666 YP_003474961.1 CDS HMPREF0868_0639 NC_013895.2 1155833 1156819 R identified by match to protein family HMM PF00528; putative oligopeptide ABC transporter permease AppB complement(1155833..1156819) Clostridiales genomosp. BVAB3 str. UPII9-5 8811395 YP_003474960.1 CDS HMPREF0868_0638 NC_013895.2 1156918 1158918 R identified by match to protein family HMM PF00496; family 5 extracellular solute-binding protein complement(1156918..1158918) Clostridiales genomosp. BVAB3 str. UPII9-5 8810599 YP_003474959.1 CDS acpP NC_013895.2 1159081 1159320 R identified by match to protein family HMM PF00550; match to protein family HMM TIGR00517; acyl carrier protein complement(1159081..1159320) Clostridiales genomosp. BVAB3 str. UPII9-5 8811475 YP_003474958.2 CDS HMPREF0868_0636 NC_013895.2 1159448 1160053 R hypothetical protein complement(1159448..1160053) Clostridiales genomosp. BVAB3 str. UPII9-5 8810767 YP_003474957.1 CDS pgsA NC_013895.2 1161440 1162033 R identified by match to protein family HMM PF01066; match to protein family HMM TIGR00560; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase complement(1161440..1162033) Clostridiales genomosp. BVAB3 str. UPII9-5 8810072 YP_003474956.1 CDS rimO NC_013895.2 1162050 1163411 R identified by match to protein family HMM PF00919; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR01125; ribosomal protein S12 methylthiotransferase RimO complement(1162050..1163411) Clostridiales genomosp. BVAB3 str. UPII9-5 8810958 YP_003474955.1 CDS recX NC_013895.2 1163408 1164235 R identified by match to protein family HMM PF02631; regulatory protein RecX complement(1163408..1164235) Clostridiales genomosp. BVAB3 str. UPII9-5 8810208 YP_003474954.1 CDS recA NC_013895.2 1164235 1165386 R identified by match to protein family HMM PF00154; match to protein family HMM TIGR02012; protein RecA complement(1164235..1165386) Clostridiales genomosp. BVAB3 str. UPII9-5 8810214 YP_003474953.1 CDS HMPREF0868_0631 NC_013895.2 1165520 1167355 R identified by match to protein family HMM PF03023; putative integral membrane protein MviN complement(1165520..1167355) Clostridiales genomosp. BVAB3 str. UPII9-5 8811078 YP_003474952.1 CDS HMPREF0868_0630 NC_013895.2 1167366 1168709 R identified by match to protein family HMM PF00994; match to protein family HMM PF02464; match to protein family HMM TIGR00199; match to protein family HMM TIGR00200; competence/damage-inducible protein CinA N-terminal domain-containing protein complement(1167366..1168709) Clostridiales genomosp. BVAB3 str. UPII9-5 8811422 YP_003474951.1 CDS folD NC_013895.2 1168694 1169563 R identified by match to protein family HMM PF00763; match to protein family HMM PF02882; tetrahydrofolate dehydrogenase/cyclohydrolase complement(1168694..1169563) Clostridiales genomosp. BVAB3 str. UPII9-5 8810769 YP_003474950.1 CDS HMPREF0868_0628 NC_013895.2 1169645 1173124 R identified by match to protein family HMM PF01580; match to protein family HMM PF09397; putative stage III sporulation protein E complement(1169645..1173124) Clostridiales genomosp. BVAB3 str. UPII9-5 8811148 YP_003474949.1 CDS HMPREF0868_0627 NC_013895.2 1173124 1173699 R identified by match to protein family HMM PF00293; NUDIX family hydrolase complement(1173124..1173699) Clostridiales genomosp. BVAB3 str. UPII9-5 8810564 YP_003474948.1 CDS rnhA NC_013895.2 1173746 1174216 R identified by match to protein family HMM PF00075; ribonuclease HI complement(1173746..1174216) Clostridiales genomosp. BVAB3 str. UPII9-5 8810945 YP_003474947.1 CDS trpS NC_013895.2 1174234 1175232 R identified by match to protein family HMM PF00579; match to protein family HMM TIGR00233; tryptophan--tRNA ligase complement(1174234..1175232) Clostridiales genomosp. BVAB3 str. UPII9-5 8810219 YP_003474946.1 CDS HMPREF0868_0624 NC_013895.2 1175352 1175540 R hypothetical protein complement(1175352..1175540) Clostridiales genomosp. BVAB3 str. UPII9-5 8811554 YP_003474945.1 CDS HMPREF0868_0622 NC_013895.2 1175799 1176335 D identified by match to protein family HMM PF00156; phosphoribosyl transferase domain-containing protein 1175799..1176335 Clostridiales genomosp. BVAB3 str. UPII9-5 8811452 YP_003474944.1 CDS dnaE NC_013895.2 1176397 1180374 R identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594; DNA polymerase III subunit alpha complement(1176397..1180374) Clostridiales genomosp. BVAB3 str. UPII9-5 8811404 YP_003474943.1 CDS HMPREF0868_0620 NC_013895.2 1180390 1182132 R identified by match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; putative phosphoglucomutase complement(1180390..1182132) Clostridiales genomosp. BVAB3 str. UPII9-5 8810345 YP_003474942.1 CDS uvrB NC_013895.2 1182186 1184417 R identified by match to protein family HMM PF00271; match to protein family HMM PF02151; match to protein family HMM PF04851; match to protein family HMM TIGR00631; excinuclease ABC subunit B complement(1182186..1184417) Clostridiales genomosp. BVAB3 str. UPII9-5 8811005 YP_003474941.1 CDS HMPREF0868_0618 NC_013895.2 1184426 1186384 R identified by match to protein family HMM PF00183; match to protein family HMM PF02518; Hsp90 protein complement(1184426..1186384) Clostridiales genomosp. BVAB3 str. UPII9-5 8810516 YP_003474940.1 CDS acpS NC_013895.2 1186441 1186965 R identified by match to protein family HMM PF01648; match to protein family HMM TIGR00516; match to protein family HMM TIGR00556; holo-[acyl-carrier-protein] synthase complement(1186441..1186965) Clostridiales genomosp. BVAB3 str. UPII9-5 8809969 YP_003474939.1 CDS HMPREF0868_0616 NC_013895.2 1186962 1188017 R hypothetical protein complement(1186962..1188017) Clostridiales genomosp. BVAB3 str. UPII9-5 8811051 YP_003474938.1 CDS HMPREF0868_0615 NC_013895.2 1188038 1189336 R identified by match to protein family HMM TIGR01446; DnaD and phage-associated domain-containing protein complement(1188038..1189336) Clostridiales genomosp. BVAB3 str. UPII9-5 8810319 YP_003474937.1 CDS HMPREF0868_0614 NC_013895.2 1189396 1189521 R hypothetical protein complement(1189396..1189521) Clostridiales genomosp. BVAB3 str. UPII9-5 8810818 YP_003474936.1 CDS nifJ NC_013895.2 1189583 1193131 R identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176; pyruvate synthase complement(1189583..1193131) Clostridiales genomosp. BVAB3 str. UPII9-5 8810469 YP_003474934.1 CDS HMPREF0868_0611 NC_013895.2 1193403 1193516 R hypothetical protein complement(1193403..1193516) Clostridiales genomosp. BVAB3 str. UPII9-5 8811511 YP_003474933.1 CDS tpiA NC_013895.2 1193551 1195506 R identified by match to protein family HMM PF00121; match to protein family HMM PF00162; match to protein family HMM TIGR00419; triose-phosphate isomerase complement(1193551..1195506) Clostridiales genomosp. BVAB3 str. UPII9-5 8810120 YP_003474932.1 CDS HMPREF0868_0609 NC_013895.2 1195669 1196256 D hypothetical protein 1195669..1196256 Clostridiales genomosp. BVAB3 str. UPII9-5 8810788 YP_003474931.1 CDS HMPREF0868_0608 NC_013895.2 1196237 1196932 D identified by match to protein family HMM PF02698; hypothetical protein 1196237..1196932 Clostridiales genomosp. BVAB3 str. UPII9-5 8811029 YP_003474930.1 CDS HMPREF0868_0607 NC_013895.2 1196936 1198351 R identified by match to protein family HMM PF00905; penicillin-binding protein complement(1196936..1198351) Clostridiales genomosp. BVAB3 str. UPII9-5 8810375 YP_003474929.1 CDS HMPREF0868_0606 NC_013895.2 1198361 1200304 R identified by match to protein family HMM PF01098; cell cycle protein, FtsW/RodA/SpoVE family complement(1198361..1200304) Clostridiales genomosp. BVAB3 str. UPII9-5 8811250 YP_003474928.1 CDS HMPREF0868_0605 NC_013895.2 1200665 1200811 R hypothetical protein complement(1200665..1200811) Clostridiales genomosp. BVAB3 str. UPII9-5 8810735 YP_003474927.1 CDS HMPREF0868_0604 NC_013895.2 1200930 1201439 D hypothetical protein 1200930..1201439 Clostridiales genomosp. BVAB3 str. UPII9-5 8810547 YP_003474926.1 CDS HMPREF0868_0603 NC_013895.2 1201567 1202922 D identified by match to protein family HMM PF02080; match to protein family HMM PF02254; match to protein family HMM PF03721; TrkA N-terminal domain-containing protein 1201567..1202922 Clostridiales genomosp. BVAB3 str. UPII9-5 8810138 YP_003474925.1 CDS HMPREF0868_0601 NC_013895.2 1202970 1204427 D identified by match to protein family HMM PF02386; potassium uptake protein, TrkH family 1202970..1204427 Clostridiales genomosp. BVAB3 str. UPII9-5 8811428 YP_003474924.1 CDS mgtE NC_013895.2 1204424 1205785 R identified by match to protein family HMM PF00571; match to protein family HMM PF01769; match to protein family HMM PF03448; match to protein family HMM TIGR00400; magnesium transporter complement(1204424..1205785) Clostridiales genomosp. BVAB3 str. UPII9-5 8810785 YP_003474923.1 CDS HMPREF0868_0600 NC_013895.2 1205860 1206006 R hypothetical protein complement(1205860..1206006) Clostridiales genomosp. BVAB3 str. UPII9-5 8811361 YP_003474922.1 CDS HMPREF0868_0599 NC_013895.2 1206036 1207220 D identified by match to protein family HMM PF01408; match to protein family HMM PF02894; NAD-binding domain-containing oxidoreductase 1206036..1207220 Clostridiales genomosp. BVAB3 str. UPII9-5 8810483 YP_003474921.1 CDS HMPREF0868_0598 NC_013895.2 1207331 1208635 R hypothetical protein complement(1207331..1208635) Clostridiales genomosp. BVAB3 str. UPII9-5 8810309 YP_003474920.1 CDS HMPREF0868_0597 NC_013895.2 1208772 1209596 R hypothetical protein complement(1208772..1209596) Clostridiales genomosp. BVAB3 str. UPII9-5 8810948 YP_003474919.1 CDS glpK NC_013895.2 1209792 1211318 R identified by match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01311; glycerol kinase complement(1209792..1211318) Clostridiales genomosp. BVAB3 str. UPII9-5 8810746 YP_003474918.1 CDS HMPREF0868_0595 NC_013895.2 1211736 1213343 R identified by match to protein family HMM TIGR01167; LPXTG-motif cell wall anchor domain-containing protein complement(1211736..1213343) Clostridiales genomosp. BVAB3 str. UPII9-5 8810071 YP_003474917.1 CDS HMPREF0868_0594 NC_013895.2 1213367 1213504 R hypothetical protein complement(1213367..1213504) Clostridiales genomosp. BVAB3 str. UPII9-5 8810685 YP_003474916.1 CDS HMPREF0868_0593 NC_013895.2 1214250 1216619 R hypothetical protein complement(1214250..1216619) Clostridiales genomosp. BVAB3 str. UPII9-5 8810115 YP_003474915.1 CDS fldA NC_013895.2 1216768 1218015 R identified by match to protein family HMM PF02515; cinnamoyl-CoA:phenyllactate CoA-transferase complement(1216768..1218015) Clostridiales genomosp. BVAB3 str. UPII9-5 8810851 YP_003474914.1 CDS etfA NC_013895.2 1218041 1219069 R identified by match to protein family HMM PF00766; match to protein family HMM PF01012; electron transfer flavoprotein complement(1218041..1219069) Clostridiales genomosp. BVAB3 str. UPII9-5 8811406 YP_003474913.1 CDS HMPREF0868_0590 NC_013895.2 1219086 1219871 R identified by match to protein family HMM PF01012; electron transfer flavoprotein domain-containing protein complement(1219086..1219871) Clostridiales genomosp. BVAB3 str. UPII9-5 8810490 YP_003474912.1 CDS HMPREF0868_0589 NC_013895.2 1219880 1221019 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028; putative butyryl-CoA dehydrogenase complement(1219880..1221019) Clostridiales genomosp. BVAB3 str. UPII9-5 8811075 YP_003474911.1 CDS HMPREF0868_0588 NC_013895.2 1221031 1222644 R identified by match to protein family HMM PF00501; AMP-binding enzyme complement(1221031..1222644) Clostridiales genomosp. BVAB3 str. UPII9-5 8811202 YP_003474910.1 CDS HMPREF0868_0587 NC_013895.2 1222749 1223870 R identified by match to protein family HMM PF06050; putative R-phenyllactate dehydratase small subunit complement(1222749..1223870) Clostridiales genomosp. BVAB3 str. UPII9-5 8811393 YP_003474909.1 CDS fldB NC_013895.2 1223873 1225141 R identified by match to protein family HMM PF06050; R-phenyllactate dehydratase medium subunit complement(1223873..1225141) Clostridiales genomosp. BVAB3 str. UPII9-5 8809970 YP_003474908.1 CDS hgdC NC_013895.2 1225234 1226013 R identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241; (R)-2-hydroxyglutaryl-CoA dehydratase activator complement(1225234..1226013) Clostridiales genomosp. BVAB3 str. UPII9-5 8810549 YP_003474907.1 CDS HMPREF0868_0584 NC_013895.2 1226256 1227416 R hypothetical protein complement(1226256..1227416) Clostridiales genomosp. BVAB3 str. UPII9-5 8810659 YP_003474906.1 CDS HMPREF0868_0583 NC_013895.2 1227650 1227766 R hypothetical protein complement(1227650..1227766) Clostridiales genomosp. BVAB3 str. UPII9-5 8811352 YP_003474905.1 CDS HMPREF0868_0582 NC_013895.2 1227790 1229091 R hypothetical protein complement(1227790..1229091) Clostridiales genomosp. BVAB3 str. UPII9-5 8811014 YP_003474904.1 CDS HMPREF0868_0581 NC_013895.2 1229191 1230357 R hypothetical protein complement(1229191..1230357) Clostridiales genomosp. BVAB3 str. UPII9-5 8811161 YP_003474903.1 CDS HMPREF0868_0580 NC_013895.2 1230781 1232088 R identified by match to protein family HMM PF00860; match to protein family HMM TIGR00801; putative uracil permease (uracil transporter) complement(1230781..1232088) Clostridiales genomosp. BVAB3 str. UPII9-5 8810327 YP_003474902.1 CDS sdaAA NC_013895.2 1232162 1233046 R identified by match to protein family HMM PF03313; match to protein family HMM TIGR00718; L-serine dehydratase subunit alpha complement(1232162..1233046) Clostridiales genomosp. BVAB3 str. UPII9-5 8811015 YP_003474901.1 CDS sdaAB NC_013895.2 1233051 1233746 R identified by match to protein family HMM PF01842; match to protein family HMM PF03315; match to protein family HMM TIGR00719; L-serine dehydratase subunit beta complement(1233051..1233746) Clostridiales genomosp. BVAB3 str. UPII9-5 8810062 YP_003474900.1 CDS HMPREF0868_0577 NC_013895.2 1234076 1235521 D hypothetical protein 1234076..1235521 Clostridiales genomosp. BVAB3 str. UPII9-5 8810174 YP_003474899.1 CDS nagB NC_013895.2 1235685 1236407 R identified by match to protein family HMM PF01182; match to protein family HMM TIGR00502; glucosamine-6-phosphate deaminase complement(1235685..1236407) Clostridiales genomosp. BVAB3 str. UPII9-5 8811382 YP_003474898.1 CDS HMPREF0868_0575 NC_013895.2 1236477 1238120 R identified by match to protein family HMM PF00155; class I/II aminotransferase complement(1236477..1238120) Clostridiales genomosp. BVAB3 str. UPII9-5 8810262 YP_003474897.1 CDS HMPREF0868_0574 NC_013895.2 1238160 1239683 R identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01893; putative Xaa-His dipeptidase complement(1238160..1239683) Clostridiales genomosp. BVAB3 str. UPII9-5 8810967 YP_003474896.1 CDS HMPREF0868_0573 NC_013895.2 1239839 1240957 D identified by match to protein family HMM PF03372; endonuclease/exonuclease/phosphatase family protein 1239839..1240957 Clostridiales genomosp. BVAB3 str. UPII9-5 8811189 YP_003474895.1 CDS HMPREF0868_0572 NC_013895.2 1241203 1241343 D hypothetical protein 1241203..1241343 Clostridiales genomosp. BVAB3 str. UPII9-5 8810706 YP_003474894.1 CDS HMPREF0868_0571 NC_013895.2 1241780 1243516 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein complement(1241780..1243516) Clostridiales genomosp. BVAB3 str. UPII9-5 8811370 YP_003474893.1 CDS HMPREF0868_0570 NC_013895.2 1243520 1245286 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein complement(1243520..1245286) Clostridiales genomosp. BVAB3 str. UPII9-5 8810107 YP_003474892.1 CDS HMPREF0868_0569 NC_013895.2 1245280 1246857 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(1245280..1246857) Clostridiales genomosp. BVAB3 str. UPII9-5 8810757 YP_003474891.1 CDS HMPREF0868_0568 NC_013895.2 1246847 1247680 R identified by match to protein family HMM PF00528; ABC transporter permease complement(1246847..1247680) Clostridiales genomosp. BVAB3 str. UPII9-5 8810372 YP_003474890.1 CDS HMPREF0868_0567 NC_013895.2 1247656 1248612 R identified by match to protein family HMM PF00528; ABC transporter permease complement(1247656..1248612) Clostridiales genomosp. BVAB3 str. UPII9-5 8810973 YP_003474889.1 CDS HMPREF0868_0566 NC_013895.2 1248638 1250164 R identified by match to protein family HMM PF00496; family 5 extracellular solute-binding protein complement(1248638..1250164) Clostridiales genomosp. BVAB3 str. UPII9-5 8810069 YP_003474888.1 CDS HMPREF0868_0565 NC_013895.2 1250783 1250929 R hypothetical protein complement(1250783..1250929) Clostridiales genomosp. BVAB3 str. UPII9-5 8811480 YP_003474887.1 CDS HMPREF0868_0564 NC_013895.2 1250938 1253133 R tetratricopeptide repeat protein complement(1250938..1253133) Clostridiales genomosp. BVAB3 str. UPII9-5 8810623 YP_003474886.1 CDS HMPREF0868_0563 NC_013895.2 1253351 1254280 D identified by match to protein family HMM PF04203; match to protein family HMM TIGR01076; sortase family protein 1253351..1254280 Clostridiales genomosp. BVAB3 str. UPII9-5 8810620 YP_003474885.1 CDS HMPREF0868_0562 NC_013895.2 1254394 1255071 R identified by match to protein family HMM PF00005; putative bacteriocin ABC transporter complement(1254394..1255071) Clostridiales genomosp. BVAB3 str. UPII9-5 8811304 YP_003474884.1 CDS HMPREF0868_0561 NC_013895.2 1255072 1257270 R hypothetical protein complement(1255072..1257270) Clostridiales genomosp. BVAB3 str. UPII9-5 8810432 YP_003474883.1 CDS HMPREF0868_0560 NC_013895.2 1257314 1257451 R hypothetical protein complement(1257314..1257451) Clostridiales genomosp. BVAB3 str. UPII9-5 8810143 YP_003474882.1 CDS HMPREF0868_0559 NC_013895.2 1257785 1260166 R identified by match to protein family HMM PF00343; match to protein family HMM TIGR02093; putative maltodextrin phosphorylase complement(1257785..1260166) Clostridiales genomosp. BVAB3 str. UPII9-5 8811248 YP_003474881.1 CDS HMPREF0868_0558 NC_013895.2 1260242 1261603 R identified by match to protein family HMM PF09587; capsule synthesis protein complement(1260242..1261603) Clostridiales genomosp. BVAB3 str. UPII9-5 8810715 YP_003474880.1 CDS HMPREF0868_0557 NC_013895.2 1261717 1263126 D hypothetical protein 1261717..1263126 Clostridiales genomosp. BVAB3 str. UPII9-5 8811537 YP_003474879.1 CDS HMPREF0868_0555 NC_013895.2 1263604 1263756 R hypothetical protein complement(1263604..1263756) Clostridiales genomosp. BVAB3 str. UPII9-5 8811323 YP_003474878.1 CDS HMPREF0868_0554 NC_013895.2 1263743 1264168 R hypothetical protein complement(1263743..1264168) Clostridiales genomosp. BVAB3 str. UPII9-5 8810370 YP_003474877.1 CDS HMPREF0868_0553 NC_013895.2 1264152 1264346 R hypothetical protein complement(1264152..1264346) Clostridiales genomosp. BVAB3 str. UPII9-5 8810260 YP_003474876.1 CDS HMPREF0868_0552 NC_013895.2 1264347 1264481 R hypothetical protein complement(1264347..1264481) Clostridiales genomosp. BVAB3 str. UPII9-5 8810270 YP_003474875.1 CDS HMPREF0868_0551 NC_013895.2 1264572 1264772 R hypothetical protein complement(1264572..1264772) Clostridiales genomosp. BVAB3 str. UPII9-5 8810970 YP_003474874.1 CDS HMPREF0868_0550 NC_013895.2 1264876 1265385 R hypothetical protein complement(1264876..1265385) Clostridiales genomosp. BVAB3 str. UPII9-5 8810140 YP_003474873.1 CDS HMPREF0868_0549 NC_013895.2 1265469 1265648 R hypothetical protein complement(1265469..1265648) Clostridiales genomosp. BVAB3 str. UPII9-5 8810823 YP_003474872.1 CDS HMPREF0868_0548 NC_013895.2 1265722 1265949 R hypothetical protein complement(1265722..1265949) Clostridiales genomosp. BVAB3 str. UPII9-5 8811203 YP_003474871.1 CDS HMPREF0868_0547 NC_013895.2 1265936 1266226 R hypothetical protein complement(1265936..1266226) Clostridiales genomosp. BVAB3 str. UPII9-5 8810097 YP_003474870.1 CDS HMPREF0868_0546 NC_013895.2 1266219 1266533 R hypothetical protein complement(1266219..1266533) Clostridiales genomosp. BVAB3 str. UPII9-5 8810471 YP_003474869.1 CDS HMPREF0868_0545 NC_013895.2 1267481 1273402 R identified by match to protein family HMM PF00656; caspase domain-containing protein complement(1267481..1273402) Clostridiales genomosp. BVAB3 str. UPII9-5 8811347 YP_003474868.1 CDS HMPREF0868_0544 NC_013895.2 1273560 1273676 R hypothetical protein complement(1273560..1273676) Clostridiales genomosp. BVAB3 str. UPII9-5 8810328 YP_003474867.1 CDS maf NC_013895.2 1273684 1274292 D identified by match to protein family HMM PF02545; match to protein family HMM TIGR00172; septum formation protein Maf 1273684..1274292 Clostridiales genomosp. BVAB3 str. UPII9-5 8811272 YP_003474866.1 CDS HMPREF0868_0542 NC_013895.2 1274357 1274740 R hypothetical protein complement(1274357..1274740) Clostridiales genomosp. BVAB3 str. UPII9-5 8811438 YP_003474865.1 CDS HMPREF0868_0541 NC_013895.2 1274931 1275665 D identified by match to protein family HMM PF03009; glycerophosphodiester phosphodiesterase family protein 1274931..1275665 Clostridiales genomosp. BVAB3 str. UPII9-5 8810555 YP_003474864.1 CDS HMPREF0868_0540 NC_013895.2 1275765 1277201 D identified by match to protein family HMM PF07690; major facilitator family transporter 1275765..1277201 Clostridiales genomosp. BVAB3 str. UPII9-5 8810034 YP_003474863.1 CDS HMPREF0868_0539 NC_013895.2 1277365 1277532 D hypothetical protein 1277365..1277532 Clostridiales genomosp. BVAB3 str. UPII9-5 8810794 YP_003474862.1 CDS adh2 NC_013895.2 1277605 1280250 D identified by match to protein family HMM PF00465; aldehyde-alcohol dehydrogenase 2 1277605..1280250 Clostridiales genomosp. BVAB3 str. UPII9-5 8809937 YP_003474861.2 CDS thrS NC_013895.2 1280656 1282596 D identified by match to protein family HMM PF00587; match to protein family HMM PF02824; match to protein family HMM PF03129; match to protein family HMM PF07973; match to protein family HMM TIGR00418; threonine--tRNA ligase 1280656..1282596 Clostridiales genomosp. BVAB3 str. UPII9-5 8809945 YP_003474860.1 CDS HMPREF0868_0535 NC_013895.2 1282671 1282784 D hypothetical protein 1282671..1282784 Clostridiales genomosp. BVAB3 str. UPII9-5 8810856 YP_003474859.1 CDS HMPREF0868_0534 NC_013895.2 1282867 1283313 D identified by match to protein family HMM PF02583; putative copper-sensing transcriptional repressor CsoR 1282867..1283313 Clostridiales genomosp. BVAB3 str. UPII9-5 8810569 YP_003474858.1 CDS HMPREF0868_0533 NC_013895.2 1283410 1283895 R identified by match to protein family HMM PF01047; putative organic hydroperoxide resistance transcriptional regulator complement(1283410..1283895) Clostridiales genomosp. BVAB3 str. UPII9-5 8810426 YP_003474857.1 CDS nrdG NC_013895.2 1284375 1285166 R identified by match to protein family HMM TIGR02491; anaerobic ribonucleoside-triphosphate reductase activating protein complement(1284375..1285166) Clostridiales genomosp. BVAB3 str. UPII9-5 8810232 YP_003474856.1 CDS nrdD NC_013895.2 1285138 1287348 R identified by match to protein family HMM PF01228; match to protein family HMM PF03477; match to protein family HMM TIGR02487; anaerobic ribonucleoside-triphosphate reductase complement(1285138..1287348) Clostridiales genomosp. BVAB3 str. UPII9-5 8810931 YP_003474855.1 CDS HMPREF0868_0530 NC_013895.2 1288077 1288541 R hypothetical protein complement(1288077..1288541) Clostridiales genomosp. BVAB3 str. UPII9-5 8810066 YP_003474854.1 CDS HMPREF0868_0529 NC_013895.2 1288799 1288948 R hypothetical protein complement(1288799..1288948) Clostridiales genomosp. BVAB3 str. UPII9-5 8810759 YP_003474853.1 CDS HMPREF0868_0528 NC_013895.2 1289172 1289663 R identified by match to protein family HMM PF08974; hypothetical protein complement(1289172..1289663) Clostridiales genomosp. BVAB3 str. UPII9-5 8810245 YP_003474852.1 CDS HMPREF0868_0527 NC_013895.2 1289629 1289766 R hypothetical protein complement(1289629..1289766) Clostridiales genomosp. BVAB3 str. UPII9-5 8810392 YP_003474851.1 CDS HMPREF0868_0526 NC_013895.2 1289826 1290074 R hypothetical protein complement(1289826..1290074) Clostridiales genomosp. BVAB3 str. UPII9-5 8809965 YP_003933649.1 CDS HMPREF0868_0525 NC_013895.2 1290191 1290478 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; hypothetical protein complement(1290191..1290478) Clostridiales genomosp. BVAB3 str. UPII9-5 8810923 YP_003933650.1 CDS HMPREF0868_0524 NC_013895.2 1290528 1290929 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(1290528..1290929) Clostridiales genomosp. BVAB3 str. UPII9-5 8810195 YP_003474850.1 CDS HMPREF0868_0523 NC_013895.2 1290964 1291185 R hypothetical protein complement(1290964..1291185) Clostridiales genomosp. BVAB3 str. UPII9-5 8811045 YP_003474849.1 CDS HMPREF0868_0522 NC_013895.2 1291225 1291566 R tetratricopeptide repeat protein complement(1291225..1291566) Clostridiales genomosp. BVAB3 str. UPII9-5 8810378 YP_003474848.1 CDS HMPREF0868_0521 NC_013895.2 1291683 1292006 R hypothetical protein complement(1291683..1292006) Clostridiales genomosp. BVAB3 str. UPII9-5 8811334 YP_003474847.1 CDS HMPREF0868_0520 NC_013895.2 1292061 1292669 R hypothetical protein complement(1292061..1292669) Clostridiales genomosp. BVAB3 str. UPII9-5 8810643 YP_003474846.1 CDS HMPREF0868_0519 NC_013895.2 1292748 1294049 R hypothetical protein complement(1292748..1294049) Clostridiales genomosp. BVAB3 str. UPII9-5 8810979 YP_003474845.1 CDS HMPREF0868_0517 NC_013895.2 1294446 1294562 D RelE domain-containing toxin-antitoxin system toxin protein 1294446..1294562 Clostridiales genomosp. BVAB3 str. UPII9-5 8809971 YP_003933651.1 CDS HMPREF0868_0518 NC_013895.2 1294549 1294737 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(1294549..1294737) Clostridiales genomosp. BVAB3 str. UPII9-5 8809984 YP_003474844.1 CDS HMPREF0868_0516 NC_013895.2 1295252 1295611 R hypothetical protein complement(1295252..1295611) Clostridiales genomosp. BVAB3 str. UPII9-5 8811486 YP_003933652.1 CDS HMPREF0868_0515 NC_013895.2 1295789 1296082 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(1295789..1296082) Clostridiales genomosp. BVAB3 str. UPII9-5 8810053 YP_003474843.1 CDS HMPREF0868_0514 NC_013895.2 1296084 1296227 R hypothetical protein complement(1296084..1296227) Clostridiales genomosp. BVAB3 str. UPII9-5 8811519 YP_003474842.1 CDS HMPREF0868_0512 NC_013895.2 1296540 1297160 R hypothetical protein complement(1296540..1297160) Clostridiales genomosp. BVAB3 str. UPII9-5 8810283 YP_003474841.1 CDS HMPREF0868_0511 NC_013895.2 1297162 1298538 R hypothetical protein complement(1297162..1298538) Clostridiales genomosp. BVAB3 str. UPII9-5 8810989 YP_003474840.1 CDS HMPREF0868_0510 NC_013895.2 1298688 1299902 D identified by match to protein family HMM PF07221; N-acylglucosamine 2-epimerase 1298688..1299902 Clostridiales genomosp. BVAB3 str. UPII9-5 8811319 YP_003474839.1 CDS HMPREF0868_0509 NC_013895.2 1300057 1300980 D identified by match to protein family HMM PF01380; match to protein family HMM PF01418; RpiR family transcriptional regulator 1300057..1300980 Clostridiales genomosp. BVAB3 str. UPII9-5 8810387 YP_003474838.1 CDS HMPREF0868_0508 NC_013895.2 1301144 1302490 D identified by match to protein family HMM PF01547; extracellular solute-binding protein 1301144..1302490 Clostridiales genomosp. BVAB3 str. UPII9-5 8811484 YP_003474837.1 CDS HMPREF0868_0507 NC_013895.2 1302624 1303532 D identified by match to protein family HMM PF00528; ABC transporter permease 1302624..1303532 Clostridiales genomosp. BVAB3 str. UPII9-5 8810611 YP_003474836.1 CDS HMPREF0868_0506 NC_013895.2 1303542 1304372 D identified by match to protein family HMM PF00528; ABC transporter permease 1303542..1304372 Clostridiales genomosp. BVAB3 str. UPII9-5 8810500 YP_003474835.1 CDS HMPREF0868_0505 NC_013895.2 1304515 1305420 D identified by match to protein family HMM PF00701; putative N-acetylneuraminate lyase 1304515..1305420 Clostridiales genomosp. BVAB3 str. UPII9-5 8811413 YP_003474834.1 CDS nagA NC_013895.2 1305433 1306563 D identified by match to protein family HMM PF01979; match to protein family HMM TIGR00221; N-acetylglucosamine-6-phosphate deacetylase 1305433..1306563 Clostridiales genomosp. BVAB3 str. UPII9-5 8810684 YP_003474833.1 CDS HMPREF0868_0503 NC_013895.2 1306729 1307847 D identified by match to protein family HMM PF00005; match to protein family HMM PF03459; match to protein family HMM PF08402; phycoerythrin, alpha/beta chain 1306729..1307847 Clostridiales genomosp. BVAB3 str. UPII9-5 8811211 YP_003474832.1 CDS thiD_2 NC_013895.2 1308079 1308894 R identified by match to protein family HMM PF08543; match to protein family HMM TIGR00097; phosphomethylpyrimidine kinase complement(1308079..1308894) Clostridiales genomosp. BVAB3 str. UPII9-5 8810476 YP_003474831.1 CDS HMPREF0868_0501 NC_013895.2 1308924 1309607 R hypothetical protein complement(1308924..1309607) Clostridiales genomosp. BVAB3 str. UPII9-5 8810187 YP_003474830.1 CDS HMPREF0868_0500 NC_013895.2 1309714 1310574 D identified by match to protein family HMM PF00899; ThiF family protein 1309714..1310574 Clostridiales genomosp. BVAB3 str. UPII9-5 8811163 YP_003474829.1 CDS HMPREF0868_0499 NC_013895.2 1310654 1312396 R putative threonine synthase complement(1310654..1312396) Clostridiales genomosp. BVAB3 str. UPII9-5 8810000 YP_003474828.1 CDS HMPREF0868_0498 NC_013895.2 1312645 1314219 R identified by match to protein family HMM PF02875; match to protein family HMM TIGR01499; putative tetrahydrofolate synthase complement(1312645..1314219) Clostridiales genomosp. BVAB3 str. UPII9-5 8810927 YP_003474827.1 CDS HMPREF0868_0497 NC_013895.2 1314222 1315061 R identified by match to protein family HMM PF04138; GtrA-like protein complement(1314222..1315061) Clostridiales genomosp. BVAB3 str. UPII9-5 8810807 YP_003474826.1 CDS HMPREF0868_0496 NC_013895.2 1315048 1315782 R HD domain-containing protein complement(1315048..1315782) Clostridiales genomosp. BVAB3 str. UPII9-5 8811337 YP_003474825.1 CDS HMPREF0868_0495 NC_013895.2 1315804 1318353 R identified by match to protein family HMM PF00580; UvrD/REP helicase complement(1315804..1318353) Clostridiales genomosp. BVAB3 str. UPII9-5 8810124 YP_003474824.1 CDS HMPREF0868_0494 NC_013895.2 1318535 1321603 R identified by match to protein family HMM PF04313; match to protein family HMM PF04851; match to protein family HMM TIGR00348; HsdR family type I site-specific deoxyribonuclease complement(1318535..1321603) Clostridiales genomosp. BVAB3 str. UPII9-5 8810832 YP_003474823.1 CDS HMPREF0868_0493 NC_013895.2 1321697 1322887 R identified by match to protein family HMM PF01420; type I restriction modification DNA specificity domain-containing protein complement(1321697..1322887) Clostridiales genomosp. BVAB3 str. UPII9-5 8810664 YP_003474822.1 CDS HMPREF0868_0492 NC_013895.2 1322900 1323889 R identified by match to protein family HMM PF00589; phage integrase, N-terminal SAM domain-containing protein complement(1322900..1323889) Clostridiales genomosp. BVAB3 str. UPII9-5 8810514 YP_003933653.1 CDS HMPREF0868_0490 NC_013895.2 1324595 1324711 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1324595..1324711 Clostridiales genomosp. BVAB3 str. UPII9-5 8811387 YP_003474821.1 CDS HMPREF0868_0491 NC_013895.2 1324708 1325244 R identified by match to protein family HMM PF01420; type I restriction modification DNA specificity domain-containing protein complement(1324708..1325244) Clostridiales genomosp. BVAB3 str. UPII9-5 8811205 YP_003474820.1 CDS HMPREF0868_0489 NC_013895.2 1325234 1326739 R identified by match to protein family HMM PF02384; putative type I restriction-modification system, M subunit complement(1325234..1326739) Clostridiales genomosp. BVAB3 str. UPII9-5 8810780 YP_003474819.1 CDS HMPREF0868_0488 NC_013895.2 1326785 1326949 R hypothetical protein complement(1326785..1326949) Clostridiales genomosp. BVAB3 str. UPII9-5 8810268 YP_003474818.1 CDS raiA NC_013895.2 1327288 1327830 R identified by match to protein family HMM PF02482; match to protein family HMM TIGR00741; ribosomal subunit interface protein complement(1327288..1327830) Clostridiales genomosp. BVAB3 str. UPII9-5 8811462 YP_003474817.1 CDS HMPREF0868_0486 NC_013895.2 1328004 1329305 R identified by match to protein family HMM PF00535; glycosyltransferase group 2 family protein complement(1328004..1329305) Clostridiales genomosp. BVAB3 str. UPII9-5 8811223 YP_003474815.1 CDS HMPREF0868_0483 NC_013895.2 1329561 1330499 D hydrolase, alpha/beta domain-containing protein 1329561..1330499 Clostridiales genomosp. BVAB3 str. UPII9-5 8810289 YP_003474814.1 CDS murE NC_013895.2 1330457 1332382 R identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01085; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase complement(1330457..1332382) Clostridiales genomosp. BVAB3 str. UPII9-5 8810152 YP_003474813.1 CDS HMPREF0868_0482 NC_013895.2 1332453 1332656 R hypothetical protein complement(1332453..1332656) Clostridiales genomosp. BVAB3 str. UPII9-5 8811502 YP_003474812.1 CDS HMPREF0868_0481 NC_013895.2 1332656 1334023 D identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein 1332656..1334023 Clostridiales genomosp. BVAB3 str. UPII9-5 8810376 YP_003474811.1 CDS HMPREF0868_0480 NC_013895.2 1334035 1334700 D identified by match to protein family HMM PF00753; metallo-beta-lactamase domain-containing protein 1334035..1334700 Clostridiales genomosp. BVAB3 str. UPII9-5 8810094 YP_003474810.1 CDS HMPREF0868_0479 NC_013895.2 1334754 1334876 R hypothetical protein complement(1334754..1334876) Clostridiales genomosp. BVAB3 str. UPII9-5 8810833 YP_003474809.1 CDS HMPREF0868_0478 NC_013895.2 1334960 1335391 R identified by match to protein family HMM PF01047; MarR family transcriptional regulator complement(1334960..1335391) Clostridiales genomosp. BVAB3 str. UPII9-5 8810301 YP_003474808.1 CDS HMPREF0868_0477 NC_013895.2 1335433 1337478 R identified by match to protein family HMM PF01757; putative acyltransferase complement(1335433..1337478) Clostridiales genomosp. BVAB3 str. UPII9-5 8810987 YP_003474807.1 CDS HMPREF0868_0476 NC_013895.2 1337752 1338624 D hypothetical protein 1337752..1338624 Clostridiales genomosp. BVAB3 str. UPII9-5 8810275 YP_003474806.1 CDS HMPREF0868_0475 NC_013895.2 1338767 1338886 D hypothetical protein 1338767..1338886 Clostridiales genomosp. BVAB3 str. UPII9-5 8810745 YP_003474805.1 CDS HMPREF0868_0474 NC_013895.2 1338909 1339943 D identified by match to protein family HMM PF01212; beta-eliminating lyase 1338909..1339943 Clostridiales genomosp. BVAB3 str. UPII9-5 8809977 YP_003474804.1 CDS HMPREF0868_0473 NC_013895.2 1340032 1340802 R hypothetical protein complement(1340032..1340802) Clostridiales genomosp. BVAB3 str. UPII9-5 8811055 YP_003474803.1 CDS clpC NC_013895.2 1340832 1343606 R identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; negative regulator of genetic competence ClpC/MecB complement(1340832..1343606) Clostridiales genomosp. BVAB3 str. UPII9-5 8811273 YP_003474802.1 CDS HMPREF0868_0471 NC_013895.2 1343821 1345062 R identified by match to protein family HMM PF00217; ATP:guanido phosphotransferase, C-terminal catalytic domain-containing protein complement(1343821..1345062) Clostridiales genomosp. BVAB3 str. UPII9-5 8810373 YP_003474801.1 CDS HMPREF0868_0470 NC_013895.2 1345065 1345730 R identified by match to protein family HMM PF02151; hypothetical protein complement(1345065..1345730) Clostridiales genomosp. BVAB3 str. UPII9-5 8811441 YP_003474800.1 CDS HMPREF0868_0469 NC_013895.2 1345708 1346208 R identified by match to protein family HMM PF05848; putative transcriptional regulator complement(1345708..1346208) Clostridiales genomosp. BVAB3 str. UPII9-5 8810744 YP_003474799.1 CDS HMPREF0868_0468 NC_013895.2 1346421 1346567 R hypothetical protein complement(1346421..1346567) Clostridiales genomosp. BVAB3 str. UPII9-5 8810038 YP_003474798.1 CDS HMPREF0868_0467 NC_013895.2 1346598 1347101 R hypothetical protein complement(1346598..1347101) Clostridiales genomosp. BVAB3 str. UPII9-5 8811288 YP_003474797.1 CDS HMPREF0868_0466 NC_013895.2 1347140 1347631 R Tat pathway signal sequence domain-containing protein complement(1347140..1347631) Clostridiales genomosp. BVAB3 str. UPII9-5 8810629 YP_003474796.1 CDS HMPREF0868_0465 NC_013895.2 1347793 1348590 D identified by match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family HMM TIGR01484; HAD hydrolase 1347793..1348590 Clostridiales genomosp. BVAB3 str. UPII9-5 8811541 YP_003474795.1 CDS HMPREF0868_0463 NC_013895.2 1348842 1350998 R identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525; putative bacteriochlorophyll 4-vinyl reductase complement(1348842..1350998) Clostridiales genomosp. BVAB3 str. UPII9-5 8811468 YP_003474794.1 CDS HMPREF0868_0462 NC_013895.2 1351099 1351383 R hypothetical protein complement(1351099..1351383) Clostridiales genomosp. BVAB3 str. UPII9-5 8810675 YP_003474793.1 CDS HMPREF0868_0461 NC_013895.2 1351425 1351583 R hypothetical protein complement(1351425..1351583) Clostridiales genomosp. BVAB3 str. UPII9-5 8809953 YP_003474792.1 CDS HMPREF0868_0460 NC_013895.2 1351582 1351716 D hypothetical protein 1351582..1351716 Clostridiales genomosp. BVAB3 str. UPII9-5 8809955 YP_003474791.1 CDS HMPREF0868_0459 NC_013895.2 1351877 1354300 D identified by match to protein family HMM PF02517; CAAX amino terminal protease family protein 1351877..1354300 Clostridiales genomosp. BVAB3 str. UPII9-5 8810994 YP_003474790.1 CDS HMPREF0868_0458 NC_013895.2 1354323 1355702 R identified by match to protein family HMM PF01136; U32 family peptidase complement(1354323..1355702) Clostridiales genomosp. BVAB3 str. UPII9-5 8810326 YP_003474789.1 CDS HMPREF0868_0457 NC_013895.2 1355715 1357004 R identified by match to protein family HMM PF02618; match to protein family HMM TIGR00247; hypothetical protein complement(1355715..1357004) Clostridiales genomosp. BVAB3 str. UPII9-5 8810976 YP_003474788.1 CDS typA NC_013895.2 1357055 1358896 R identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR01394; GTP-binding protein TypA complement(1357055..1358896) Clostridiales genomosp. BVAB3 str. UPII9-5 8810294 YP_003474787.1 CDS engA NC_013895.2 1359012 1360337 R identified by match to protein family HMM PF01926; match to protein family HMM PF08477; match to protein family HMM TIGR00231; match to protein family HMM TIGR03594; ribosome-associated GTPase EngA complement(1359012..1360337) Clostridiales genomosp. BVAB3 str. UPII9-5 8810810 YP_003474786.1 CDS HMPREF0868_0454 NC_013895.2 1360291 1360416 R hypothetical protein complement(1360291..1360416) Clostridiales genomosp. BVAB3 str. UPII9-5 8810693 YP_003474785.1 CDS rpmF NC_013895.2 1360416 1360607 R identified by match to protein family HMM PF01783; match to protein family HMM TIGR01031; 50S ribosomal protein L32 complement(1360416..1360607) Clostridiales genomosp. BVAB3 str. UPII9-5 8811179 YP_003474784.1 CDS HMPREF0868_0452 NC_013895.2 1360637 1361173 R identified by match to protein family HMM PF02620; hypothetical protein complement(1360637..1361173) Clostridiales genomosp. BVAB3 str. UPII9-5 8810908 YP_003474783.1 CDS HMPREF0868_0451 NC_013895.2 1361301 1364033 R identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01517; calcium-translocating P-type ATPase complement(1361301..1364033) Clostridiales genomosp. BVAB3 str. UPII9-5 8811386 YP_003474782.1 CDS HMPREF0868_0450 NC_013895.2 1364307 1365539 D identified by match to protein family HMM PF02388; FemAB family protein 1364307..1365539 Clostridiales genomosp. BVAB3 str. UPII9-5 8811108 YP_003474781.1 CDS HMPREF0868_0449 NC_013895.2 1365587 1366819 D identified by match to protein family HMM PF02388; FemAB family protein 1365587..1366819 Clostridiales genomosp. BVAB3 str. UPII9-5 8810031 YP_003474780.1 CDS HMPREF0868_0448 NC_013895.2 1366857 1368575 R identified by match to protein family HMM PF00092; von Willebrand factor type A domain-containing protein complement(1366857..1368575) Clostridiales genomosp. BVAB3 str. UPII9-5 8811253 YP_003474779.1 CDS proS NC_013895.2 1368914 1370365 R identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM PF09180; match to protein family HMM TIGR00408; proline--tRNA ligase complement(1368914..1370365) Clostridiales genomosp. BVAB3 str. UPII9-5 8810207 YP_003474778.1 CDS HMPREF0868_0446 NC_013895.2 1370635 1371738 R identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766; transposase, IS605 OrfB family protein complement(1370635..1371738) Clostridiales genomosp. BVAB3 str. UPII9-5 8810959 YP_003933654.1 CDS HMPREF0868_0445 NC_013895.2 1371756 1371965 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(1371756..1371965) Clostridiales genomosp. BVAB3 str. UPII9-5 8810110 YP_003474777.1 CDS HMPREF0868_0444 NC_013895.2 1372245 1372709 R identified by match to protein family HMM PF06695; putative small multi-drug export protein complement(1372245..1372709) Clostridiales genomosp. BVAB3 str. UPII9-5 8810308 YP_003474776.1 CDS HMPREF0868_0443 NC_013895.2 1372867 1374054 D identified by match to protein family HMM PF00155; putative aromatic-amino-acid transaminase 1372867..1374054 Clostridiales genomosp. BVAB3 str. UPII9-5 8810412 YP_003474775.1 CDS HMPREF0868_0442 NC_013895.2 1374068 1374196 R hypothetical protein complement(1374068..1374196) Clostridiales genomosp. BVAB3 str. UPII9-5 8811292 YP_003474774.1 CDS HMPREF0868_0441 NC_013895.2 1374167 1375054 D identified by match to protein family HMM PF00274; fructose-bisphosphate aldolase class-I 1374167..1375054 Clostridiales genomosp. BVAB3 str. UPII9-5 8811544 YP_003474773.1 CDS HMPREF0868_0439 NC_013895.2 1375275 1376012 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1375275..1376012 Clostridiales genomosp. BVAB3 str. UPII9-5 8810573 YP_003474772.1 CDS HMPREF0868_0438 NC_013895.2 1376016 1377701 D hypothetical protein 1376016..1377701 Clostridiales genomosp. BVAB3 str. UPII9-5 8811460 YP_003474771.1 CDS ahpC NC_013895.2 1377797 1378360 D identified by match to protein family HMM PF00578; match to protein family HMM PF08534; match to protein family HMM TIGR03137; peroxiredoxin 1377797..1378360 Clostridiales genomosp. BVAB3 str. UPII9-5 8810082 YP_003474770.1 CDS HMPREF0868_0436 NC_013895.2 1378633 1379214 D hypothetical protein 1378633..1379214 Clostridiales genomosp. BVAB3 str. UPII9-5 8810986 YP_003474769.1 CDS HMPREF0868_0435 NC_013895.2 1379279 1380886 R identified by match to protein family HMM PF07973; threonine/alanine tRNA ligase second additional domain-containing protein complement(1379279..1380886) Clostridiales genomosp. BVAB3 str. UPII9-5 8811265 YP_003474768.1 CDS HMPREF0868_0434 NC_013895.2 1380931 1383411 R identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525; putative cadmium, zinc and cobalt-transporting ATPase complement(1380931..1383411) Clostridiales genomosp. BVAB3 str. UPII9-5 8810172 YP_003474767.1 CDS HMPREF0868_0433 NC_013895.2 1383550 1383990 R identified by match to protein family HMM PF01022; transcriptional repressor SmtB family protein complement(1383550..1383990) Clostridiales genomosp. BVAB3 str. UPII9-5 8811547 YP_003933655.1 CDS HMPREF0868_1653 NC_013895.2 1385129 1385491 D hypothetical protein 1385129..1385491 Clostridiales genomosp. BVAB3 str. UPII9-5 9829210 YP_003474766.1 CDS HMPREF0868_0430 NC_013895.2 1385545 1386510 D identified by match to protein family HMM PF00892; hypothetical protein 1385545..1386510 Clostridiales genomosp. BVAB3 str. UPII9-5 8811483 YP_003474765.1 CDS HMPREF0868_0429 NC_013895.2 1386687 1388147 R identified by match to protein family HMM PF01943; polysaccharide biosynthesis protein complement(1386687..1388147) Clostridiales genomosp. BVAB3 str. UPII9-5 8811366 YP_003474764.1 CDS nadE NC_013895.2 1388289 1390532 D identified by match to protein family HMM PF02540; match to protein family HMM TIGR00552; NAD+ synthase 1388289..1390532 Clostridiales genomosp. BVAB3 str. UPII9-5 8810836 YP_003474763.1 CDS HMPREF0868_0427 NC_013895.2 1390645 1390875 R identified by match to protein family HMM PF00583; GNAT domain-containing toxin-antitoxin system toxin protein complement(1390645..1390875) Clostridiales genomosp. BVAB3 str. UPII9-5 8810001 YP_003474762.2 CDS HMPREF0868_0426 NC_013895.2 1390962 1392206 R identified by match to protein family HMM PF07690; major facilitator family transporter complement(1390962..1392206) Clostridiales genomosp. BVAB3 str. UPII9-5 8811125 YP_003474761.1 CDS HMPREF0868_0425 NC_013895.2 1392281 1392718 R identified by match to protein family HMM PF01022; ArsR family transcriptional regulator complement(1392281..1392718) Clostridiales genomosp. BVAB3 str. UPII9-5 8811165 YP_003474760.1 CDS HMPREF0868_0424 NC_013895.2 1392789 1392944 R hypothetical protein complement(1392789..1392944) Clostridiales genomosp. BVAB3 str. UPII9-5 8811062 YP_003474759.1 CDS HMPREF0868_0423 NC_013895.2 1393051 1393191 R hypothetical protein complement(1393051..1393191) Clostridiales genomosp. BVAB3 str. UPII9-5 8810504 YP_003933656.1 CDS HMPREF0868_0422 NC_013895.2 1393251 1393514 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(1393251..1393514) Clostridiales genomosp. BVAB3 str. UPII9-5 8811437 YP_003933657.1 CDS HMPREF0868_0421 NC_013895.2 1393548 1393814 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(1393548..1393814) Clostridiales genomosp. BVAB3 str. UPII9-5 8809942 YP_003474758.1 CDS HMPREF0868_0420 NC_013895.2 1393884 1394186 R hypothetical protein complement(1393884..1394186) Clostridiales genomosp. BVAB3 str. UPII9-5 8811426 YP_003474757.1 CDS HMPREF0868_0419 NC_013895.2 1394488 1395189 R identified by match to protein family HMM PF00132; transferase hexapeptide repeat protein complement(1394488..1395189) Clostridiales genomosp. BVAB3 str. UPII9-5 8810190 YP_003474756.1 CDS HMPREF0868_0418 NC_013895.2 1395307 1396443 D identified by match to protein family HMM PF00535; glycosyltransferase group 2 family protein 1395307..1396443 Clostridiales genomosp. BVAB3 str. UPII9-5 8810893 YP_003474755.1 CDS HMPREF0868_0417 NC_013895.2 1396451 1397407 R hypothetical protein complement(1396451..1397407) Clostridiales genomosp. BVAB3 str. UPII9-5 8811243 YP_003474754.1 CDS HMPREF0868_0416 NC_013895.2 1397557 1399632 R identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM PF03764; match to protein family HMM TIGR00231; putative translation elongation factor G complement(1397557..1399632) Clostridiales genomosp. BVAB3 str. UPII9-5 8810350 YP_003474753.1 CDS HMPREF0868_0415 NC_013895.2 1399868 1400971 R identified by match to protein family HMM PF01207; match to protein family HMM TIGR00737; TIM-barrel protein complement(1399868..1400971) Clostridiales genomosp. BVAB3 str. UPII9-5 8810475 YP_003474752.1 CDS HMPREF0868_0414 NC_013895.2 1401058 1402431 R hypothetical protein complement(1401058..1402431) Clostridiales genomosp. BVAB3 str. UPII9-5 8811331 YP_003474751.1 CDS HMPREF0868_0413 NC_013895.2 1402569 1403528 R identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; ABC transporter ATP-binding protein complement(1402569..1403528) Clostridiales genomosp. BVAB3 str. UPII9-5 8810103 YP_003474750.1 CDS HMPREF0868_0412 NC_013895.2 1403521 1404534 R identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; ABC transporter ATP-binding protein complement(1403521..1404534) Clostridiales genomosp. BVAB3 str. UPII9-5 8810665 YP_003474749.1 CDS HMPREF0868_0411 NC_013895.2 1404550 1405533 R identified by match to protein family HMM PF00528; putative dipeptide ABC transporter permease DppC complement(1404550..1405533) Clostridiales genomosp. BVAB3 str. UPII9-5 8811485 YP_003474748.1 CDS HMPREF0868_0410 NC_013895.2 1405538 1406473 R identified by match to protein family HMM PF00528; putative dipeptide ABC transporter permease DppB complement(1405538..1406473) Clostridiales genomosp. BVAB3 str. UPII9-5 8810577 YP_003474747.1 CDS HMPREF0868_0409 NC_013895.2 1406718 1408322 R identified by match to protein family HMM PF00496; family 5 extracellular solute-binding protein complement(1406718..1408322) Clostridiales genomosp. BVAB3 str. UPII9-5 8810877 YP_003474746.1 CDS mfd NC_013895.2 1408563 1412288 R identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF02559; match to protein family HMM PF03461; match to protein family HMM TIGR00580; transcription-repair coupling factor complement(1408563..1412288) Clostridiales genomosp. BVAB3 str. UPII9-5 8810200 YP_003474745.1 CDS pth NC_013895.2 1412328 1412906 R identified by match to protein family HMM PF01195; match to protein family HMM TIGR00447; aminoacyl-tRNA hydrolase complement(1412328..1412906) Clostridiales genomosp. BVAB3 str. UPII9-5 8811089 YP_003474744.1 CDS dtd NC_013895.2 1412915 1413364 R identified by match to protein family HMM PF02580; match to protein family HMM TIGR00256; D-tyrosyl-tRNA(Tyr) deacylase complement(1412915..1413364) Clostridiales genomosp. BVAB3 str. UPII9-5 8810402 YP_003474743.1 CDS HMPREF0868_0405 NC_013895.2 1413428 1413829 R hypothetical protein complement(1413428..1413829) Clostridiales genomosp. BVAB3 str. UPII9-5 8810940 YP_003474742.1 CDS HMPREF0868_0404 NC_013895.2 1414070 1415209 D identified by match to protein family HMM PF00710; match to protein family HMM TIGR00519; L-asparaginase 1414070..1415209 Clostridiales genomosp. BVAB3 str. UPII9-5 8811374 YP_003474741.1 CDS HMPREF0868_0403 NC_013895.2 1415348 1416769 R identified by match to protein family HMM PF00206; putative aspartate ammonia-lyase complement(1415348..1416769) Clostridiales genomosp. BVAB3 str. UPII9-5 8810674 YP_003474740.1 CDS HMPREF0868_0402 NC_013895.2 1416976 1417953 D identified by match to protein family HMM PF02558; match to protein family HMM PF08546; match to protein family HMM TIGR00745; putative 2-dehydropantoate 2-reductase 1416976..1417953 Clostridiales genomosp. BVAB3 str. UPII9-5 8811053 YP_003474739.1 CDS HMPREF0868_0401 NC_013895.2 1418171 1419013 R identified by match to protein family HMM PF02673; undecaprenyl pyrophosphate phosphatase complement(1418171..1419013) Clostridiales genomosp. BVAB3 str. UPII9-5 8810169 YP_003474738.1 CDS HMPREF0868_0400 NC_013895.2 1419258 1420004 D identified by match to protein family HMM PF04607; RelA/SpoT domain-containing protein 1419258..1420004 Clostridiales genomosp. BVAB3 str. UPII9-5 8810909 YP_003474737.1 CDS HMPREF0868_0399 NC_013895.2 1420040 1420936 R identified by match to protein family HMM PF00892; hypothetical protein complement(1420040..1420936) Clostridiales genomosp. BVAB3 str. UPII9-5 8810019 YP_003474736.1 CDS HMPREF0868_0398 NC_013895.2 1421207 1421641 D hypothetical protein 1421207..1421641 Clostridiales genomosp. BVAB3 str. UPII9-5 8810358 YP_003474735.1 CDS HMPREF0868_0397 NC_013895.2 1421769 1422623 D identified by match to protein family HMM PF07751; Abi-like protein 1421769..1422623 Clostridiales genomosp. BVAB3 str. UPII9-5 8811456 YP_003474734.1 CDS HMPREF0868_0396 NC_013895.2 1422841 1423029 D identified by match to protein family HMM TIGR02384; toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain-containing protein 1422841..1423029 Clostridiales genomosp. BVAB3 str. UPII9-5 8810228 YP_003474733.1 CDS pyrB NC_013895.2 1423168 1424100 D identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00670; aspartate carbamoyltransferase 1423168..1424100 Clostridiales genomosp. BVAB3 str. UPII9-5 8810793 YP_003474732.1 CDS pyrI NC_013895.2 1424093 1424518 D identified by match to protein family HMM PF01948; aspartate carbamoyltransferase, regulatory subunit 1424093..1424518 Clostridiales genomosp. BVAB3 str. UPII9-5 8811322 YP_003474731.1 CDS HMPREF0868_0393 NC_013895.2 1424597 1425790 R hypothetical protein complement(1424597..1425790) Clostridiales genomosp. BVAB3 str. UPII9-5 8810581 YP_003474730.1 CDS HMPREF0868_0392 NC_013895.2 1425817 1425933 R hypothetical protein complement(1425817..1425933) Clostridiales genomosp. BVAB3 str. UPII9-5 8810381 YP_003474729.1 CDS HMPREF0868_0391 NC_013895.2 1426220 1427989 D identified by match to protein family HMM PF00501; AMP-binding enzyme 1426220..1427989 Clostridiales genomosp. BVAB3 str. UPII9-5 8810165 YP_003474728.1 CDS HMPREF0868_0390 NC_013895.2 1428109 1429788 R identified by match to protein family HMM PF00571; match to protein family HMM PF02833; match to protein family HMM PF07085; putative inorganic diphosphatase PpaC complement(1428109..1429788) Clostridiales genomosp. BVAB3 str. UPII9-5 8811282 YP_003474727.1 CDS HMPREF0868_0389 NC_013895.2 1429945 1431294 R hypothetical protein complement(1429945..1431294) Clostridiales genomosp. BVAB3 str. UPII9-5 8810379 YP_003474726.1 CDS HMPREF0868_0388 NC_013895.2 1431498 1432172 D putative lipoprotein 1431498..1432172 Clostridiales genomosp. BVAB3 str. UPII9-5 8810866 YP_003474725.1 CDS HMPREF0868_0387 NC_013895.2 1432367 1433878 R identified by match to protein family HMM PF00939; match to protein family HMM PF03600; sodium:sulfate symporter transmembrane region complement(1432367..1433878) Clostridiales genomosp. BVAB3 str. UPII9-5 8810192 YP_003474724.1 CDS HMPREF0868_0386 NC_013895.2 1433921 1434655 R hypothetical protein complement(1433921..1434655) Clostridiales genomosp. BVAB3 str. UPII9-5 8810649 YP_003474723.1 CDS fumC NC_013895.2 1434682 1436058 D identified by match to protein family HMM PF00206; fumarate hydratase 1434682..1436058 Clostridiales genomosp. BVAB3 str. UPII9-5 8810691 YP_003474722.1 CDS HMPREF0868_0384 NC_013895.2 1436079 1436222 R hypothetical protein complement(1436079..1436222) Clostridiales genomosp. BVAB3 str. UPII9-5 8810687 YP_003474721.1 CDS HMPREF0868_0383 NC_013895.2 1436569 1438815 D identified by match to protein family HMM PF00768; serine-type D-Ala-D-Ala carboxypeptidase 1436569..1438815 Clostridiales genomosp. BVAB3 str. UPII9-5 8811174 YP_003474720.1 CDS HMPREF0868_0382 NC_013895.2 1438920 1439636 R hypothetical protein complement(1438920..1439636) Clostridiales genomosp. BVAB3 str. UPII9-5 8810499 YP_003474719.1 CDS HMPREF0868_0381 NC_013895.2 1439647 1440993 R identified by match to protein family HMM PF09605; match to protein family HMM TIGR02185; hypothetical protein complement(1439647..1440993) Clostridiales genomosp. BVAB3 str. UPII9-5 8810203 YP_003474718.1 CDS HMPREF0868_0380 NC_013895.2 1441061 1442464 R hypothetical protein complement(1441061..1442464) Clostridiales genomosp. BVAB3 str. UPII9-5 8810144 YP_003474717.1 CDS HMPREF0868_0379 NC_013895.2 1442551 1443396 R identified by match to protein family HMM PF00528; ABC transporter permease complement(1442551..1443396) Clostridiales genomosp. BVAB3 str. UPII9-5 8810447 YP_003474716.1 CDS HMPREF0868_0378 NC_013895.2 1443482 1444672 R identified by match to protein family HMM PF01547; extracellular solute-binding protein complement(1443482..1444672) Clostridiales genomosp. BVAB3 str. UPII9-5 8811159 YP_003474715.1 CDS HMPREF0868_0377 NC_013895.2 1444781 1445800 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(1444781..1445800) Clostridiales genomosp. BVAB3 str. UPII9-5 8810596 YP_003474714.1 CDS HMPREF0868_0376 NC_013895.2 1445918 1446763 R identified by match to protein family HMM PF00528; ABC transporter permease complement(1445918..1446763) Clostridiales genomosp. BVAB3 str. UPII9-5 8810550 YP_003474713.1 CDS HMPREF0868_0375 NC_013895.2 1446985 1447716 D identified by match to protein family HMM PF02308; Mg2+ transporter-C family protein 1446985..1447716 Clostridiales genomosp. BVAB3 str. UPII9-5 8809994 YP_003474712.1 CDS HMPREF0868_0374 NC_013895.2 1447794 1448672 D identified by match to protein family HMM PF02308; Mg2+ transporter-C family protein 1447794..1448672 Clostridiales genomosp. BVAB3 str. UPII9-5 8811368 YP_003474711.1 CDS HMPREF0868_0373 NC_013895.2 1448695 1449135 R identified by match to protein family HMM PF00583; GNAT family acetyltransferase complement(1448695..1449135) Clostridiales genomosp. BVAB3 str. UPII9-5 8810921 YP_003474710.1 CDS HMPREF0868_0372 NC_013895.2 1449126 1450034 R hypothetical protein complement(1449126..1450034) Clostridiales genomosp. BVAB3 str. UPII9-5 8810506 YP_003474709.1 CDS sufC NC_013895.2 1450352 1451251 D identified by match to protein family HMM PF00005; match to protein family HMM TIGR01978; FeS assembly ATPase SufC 1450352..1451251 Clostridiales genomosp. BVAB3 str. UPII9-5 8810526 YP_003474708.1 CDS HMPREF0868_0370 NC_013895.2 1451266 1452420 D identified by match to protein family HMM PF01458; SufB/sufD domain-containing protein 1451266..1452420 Clostridiales genomosp. BVAB3 str. UPII9-5 8811008 YP_003474707.1 CDS HMPREF0868_0369 NC_013895.2 1452420 1453706 D identified by match to protein family HMM PF00266; match to protein family HMM PF01053; match to protein family HMM TIGR01979; putative bifunctional cysteine desulfurase/selenocysteine lyase 1452420..1453706 Clostridiales genomosp. BVAB3 str. UPII9-5 8810335 YP_003474706.1 CDS HMPREF0868_0368 NC_013895.2 1453690 1454196 D identified by match to protein family HMM PF01592; match to protein family HMM TIGR01994; NifU family SUF system FeS assembly protein 1453690..1454196 Clostridiales genomosp. BVAB3 str. UPII9-5 8810819 YP_003474705.1 CDS sufB NC_013895.2 1454266 1455717 D identified by match to protein family HMM PF01458; match to protein family HMM TIGR01980; FeS assembly protein SufB 1454266..1455717 Clostridiales genomosp. BVAB3 str. UPII9-5 8810764 YP_003474704.1 CDS HMPREF0868_0366 NC_013895.2 1455823 1455945 R hypothetical protein complement(1455823..1455945) Clostridiales genomosp. BVAB3 str. UPII9-5 8811004 YP_003474703.1 CDS HMPREF0868_0365 NC_013895.2 1455988 1457187 R hypothetical protein complement(1455988..1457187) Clostridiales genomosp. BVAB3 str. UPII9-5 8810916 YP_003474702.1 CDS HMPREF0868_0364 NC_013895.2 1457172 1458926 R identified by match to protein family HMM PF01432; match to protein family HMM PF08439; PepF/M3 family oligoendopeptidase complement(1457172..1458926) Clostridiales genomosp. BVAB3 str. UPII9-5 8809948 YP_003474701.2 CDS HMPREF0868_0363 NC_013895.2 1459041 1460396 R hypothetical protein complement(1459041..1460396) Clostridiales genomosp. BVAB3 str. UPII9-5 8811509 YP_003474700.1 CDS agcS NC_013895.2 1460516 1461886 R identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; amino acid carrier protein complement(1460516..1461886) Clostridiales genomosp. BVAB3 str. UPII9-5 8810003 YP_003474699.1 CDS arcC NC_013895.2 1461995 1462927 R identified by match to protein family HMM PF00696; match to protein family HMM TIGR00746; carbamate kinase complement(1461995..1462927) Clostridiales genomosp. BVAB3 str. UPII9-5 8811257 YP_003474698.1 CDS argF NC_013895.2 1462989 1463981 R identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00658; ornithine carbamoyltransferase complement(1462989..1463981) Clostridiales genomosp. BVAB3 str. UPII9-5 8810600 YP_003474696.1 CDS HMPREF0868_0358 NC_013895.2 1464292 1465887 D identified by match to protein family HMM PF00165; AraC family transcriptional regulator 1464292..1465887 Clostridiales genomosp. BVAB3 str. UPII9-5 8810357 YP_003474695.1 CDS HMPREF0868_0357 NC_013895.2 1465950 1467080 D hypothetical protein 1465950..1467080 Clostridiales genomosp. BVAB3 str. UPII9-5 8811124 YP_003474694.1 CDS HMPREF0868_0356 NC_013895.2 1468004 1471309 R hypothetical protein complement(1468004..1471309) Clostridiales genomosp. BVAB3 str. UPII9-5 8810938 YP_003474693.1 CDS HMPREF0868_0355 NC_013895.2 1471561 1473390 D identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; putative phosphoglucomutase 1471561..1473390 Clostridiales genomosp. BVAB3 str. UPII9-5 8810116 YP_003474692.1 CDS HMPREF0868_0354 NC_013895.2 1473617 1474297 R hypothetical protein complement(1473617..1474297) Clostridiales genomosp. BVAB3 str. UPII9-5 8811175 YP_003474691.1 CDS HMPREF0868_0353 NC_013895.2 1474317 1475432 R identified by match to protein family HMM PF01820; match to protein family HMM PF02222; match to protein family HMM PF02655; match to protein family HMM PF07478; match to protein family HMM TIGR01205; D-ala D-ala ligase N-terminal domain-containing protein complement(1474317..1475432) Clostridiales genomosp. BVAB3 str. UPII9-5 8810290 YP_003474690.1 CDS HMPREF0868_0352 NC_013895.2 1475447 1475905 R hypothetical protein complement(1475447..1475905) Clostridiales genomosp. BVAB3 str. UPII9-5 8810576 YP_003474689.1 CDS coaD NC_013895.2 1475898 1476419 R identified by match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR01510; pantetheine-phosphate adenylyltransferase complement(1475898..1476419) Clostridiales genomosp. BVAB3 str. UPII9-5 8811270 YP_003474688.1 CDS HMPREF0868_0350 NC_013895.2 1476429 1477001 R identified by match to protein family HMM PF03602; match to protein family HMM TIGR00095; RsmD family RNA methyltransferase complement(1476429..1477001) Clostridiales genomosp. BVAB3 str. UPII9-5 8810821 YP_003474687.1 CDS recG NC_013895.2 1477003 1479159 R identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF01336; match to protein family HMM TIGR00643; ATP-dependent DNA helicase RecG complement(1477003..1479159) Clostridiales genomosp. BVAB3 str. UPII9-5 8811477 YP_003474686.1 CDS nth NC_013895.2 1479185 1479931 R identified by match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01083; endonuclease III complement(1479185..1479931) Clostridiales genomosp. BVAB3 str. UPII9-5 8810397 YP_003474685.1 CDS HMPREF0868_0347 NC_013895.2 1479960 1481726 R identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; ATPase/histidine kinase/DNA gyrase B/HSP90 domain-containing protein complement(1479960..1481726) Clostridiales genomosp. BVAB3 str. UPII9-5 8811086 YP_003474684.1 CDS HMPREF0868_0346 NC_013895.2 1481801 1482520 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; putative alkaline phosphatase synthesis transcriptional regulatory protein PhoP complement(1481801..1482520) Clostridiales genomosp. BVAB3 str. UPII9-5 8810252 YP_003474683.1 CDS nrdR NC_013895.2 1482781 1483248 R identified by match to protein family HMM PF03477; match to protein family HMM TIGR00244; transcriptional regulator NrdR complement(1482781..1483248) Clostridiales genomosp. BVAB3 str. UPII9-5 8810912 YP_003474682.1 CDS ftsZ NC_013895.2 1483308 1484759 R identified by match to protein family HMM PF00091; match to protein family HMM PF03953; match to protein family HMM TIGR00065; cell division protein FtsZ complement(1483308..1484759) Clostridiales genomosp. BVAB3 str. UPII9-5 8811487 YP_003474680.1 CDS HMPREF0868_0343 NC_013895.2 1485021 1487129 R identified by match to protein family HMM PF08478; POTRA domain-containing protein, FtsQ-type complement(1485021..1487129) Clostridiales genomosp. BVAB3 str. UPII9-5 8810570 YP_003474679.1 CDS murG NC_013895.2 1487136 1488314 R identified by match to protein family HMM PF03033; match to protein family HMM PF04101; match to protein family HMM TIGR01133; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase complement(1487136..1488314) Clostridiales genomosp. BVAB3 str. UPII9-5 8811445 YP_003474678.1 CDS HMPREF0868_0340 NC_013895.2 1488323 1489591 R identified by match to protein family HMM PF01098; cell cycle protein, FtsW/RodA/SpoVE family complement(1488323..1489591) Clostridiales genomosp. BVAB3 str. UPII9-5 8810363 YP_003474677.1 CDS mraY NC_013895.2 1489608 1490612 R identified by match to protein family HMM PF00953; match to protein family HMM TIGR00445; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(1489608..1490612) Clostridiales genomosp. BVAB3 str. UPII9-5 8811312 YP_003474676.1 CDS murF NC_013895.2 1490744 1492405 R identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01143; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase complement(1490744..1492405) Clostridiales genomosp. BVAB3 str. UPII9-5 8810315 YP_003474675.1 CDS HMPREF0868_0337 NC_013895.2 1492518 1495361 R identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM PF03793; penicillin-binding protein complement(1492518..1495361) Clostridiales genomosp. BVAB3 str. UPII9-5 8811427 YP_003474674.1 CDS HMPREF0868_0336 NC_013895.2 1495351 1496001 R hypothetical protein complement(1495351..1496001) Clostridiales genomosp. BVAB3 str. UPII9-5 8810322 YP_003474673.1 CDS mraW NC_013895.2 1496083 1497171 R identified by match to protein family HMM PF01795; match to protein family HMM TIGR00006; S-adenosyl-methyltransferase MraW complement(1496083..1497171) Clostridiales genomosp. BVAB3 str. UPII9-5 8811241 YP_003474672.1 CDS HMPREF0868_0334 NC_013895.2 1497267 1504622 R hypothetical protein complement(1497267..1504622) Clostridiales genomosp. BVAB3 str. UPII9-5 8810088 YP_003474671.1 CDS HMPREF0868_0333 NC_013895.2 1504935 1506785 D identified by match to protein family HMM TIGR00229; PAS domain S-box protein 1504935..1506785 Clostridiales genomosp. BVAB3 str. UPII9-5 8811037 YP_003474670.1 CDS HMPREF0868_0332 NC_013895.2 1506945 1507220 D hypothetical protein 1506945..1507220 Clostridiales genomosp. BVAB3 str. UPII9-5 8810050 YP_003474669.1 CDS HMPREF0868_0331 NC_013895.2 1507323 1510088 R identified by match to protein family HMM PF00005; match to protein family HMM PF02361; cobalt transport protein complement(1507323..1510088) Clostridiales genomosp. BVAB3 str. UPII9-5 8810761 YP_003474668.1 CDS HMPREF0868_0330 NC_013895.2 1510168 1510878 R membrane family protein complement(1510168..1510878) Clostridiales genomosp. BVAB3 str. UPII9-5 8810339 YP_003474667.1 CDS HMPREF0868_0329 NC_013895.2 1511277 1513292 R hypothetical protein complement(1511277..1513292) Clostridiales genomosp. BVAB3 str. UPII9-5 8811238 YP_003474666.1 CDS HMPREF0868_0328 NC_013895.2 1513382 1513582 R hypothetical protein complement(1513382..1513582) Clostridiales genomosp. BVAB3 str. UPII9-5 8810133 YP_003474665.1 CDS HMPREF0868_0327 NC_013895.2 1513609 1513749 D hypothetical protein 1513609..1513749 Clostridiales genomosp. BVAB3 str. UPII9-5 8810768 YP_003474664.1 CDS HMPREF0868_0326 NC_013895.2 1513944 1514075 R hypothetical protein complement(1513944..1514075) Clostridiales genomosp. BVAB3 str. UPII9-5 8810058 YP_003474663.1 CDS mgtA NC_013895.2 1514029 1516791 D identified by match to protein family HMM PF00122; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01524; magnesium-importing ATPase 1514029..1516791 Clostridiales genomosp. BVAB3 str. UPII9-5 8811372 YP_003474662.1 CDS HMPREF0868_0323 NC_013895.2 1517123 1517350 D hypothetical protein 1517123..1517350 Clostridiales genomosp. BVAB3 str. UPII9-5 8810492 YP_003474661.1 CDS HMPREF0868_0324 NC_013895.2 1517301 1518485 R identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; putative thermostable carboxypeptidase 1 complement(1517301..1518485) Clostridiales genomosp. BVAB3 str. UPII9-5 8810304 YP_003474660.1 CDS HMPREF0868_0322 NC_013895.2 1518500 1519336 R hypothetical protein complement(1518500..1519336) Clostridiales genomosp. BVAB3 str. UPII9-5 8811188 YP_003474659.1 CDS HMPREF0868_0321 NC_013895.2 1519532 1523542 R identified by match to protein family HMM PF02018; carbohydrate binding domain-containing protein complement(1519532..1523542) Clostridiales genomosp. BVAB3 str. UPII9-5 8810436 YP_003474658.1 CDS HMPREF0868_0320 NC_013895.2 1523564 1524934 R identified by match to protein family HMM PF01547; extracellular solute-binding protein complement(1523564..1524934) Clostridiales genomosp. BVAB3 str. UPII9-5 8811166 YP_003474657.1 CDS HMPREF0868_0319 NC_013895.2 1525138 1526109 R identified by match to protein family HMM PF00528; ABC transporter permease complement(1525138..1526109) Clostridiales genomosp. BVAB3 str. UPII9-5 8811481 YP_003474656.1 CDS HMPREF0868_0318 NC_013895.2 1526114 1527088 R identified by match to protein family HMM PF00528; ABC transporter permease complement(1526114..1527088) Clostridiales genomosp. BVAB3 str. UPII9-5 8810546 YP_003474655.1 CDS HMPREF0868_0317 NC_013895.2 1527091 1529352 R putative lipoprotein complement(1527091..1529352) Clostridiales genomosp. BVAB3 str. UPII9-5 8811451 YP_003474654.1 CDS HMPREF0868_0316 NC_013895.2 1529355 1531406 R hypothetical protein complement(1529355..1531406) Clostridiales genomosp. BVAB3 str. UPII9-5 8810530 YP_003474653.1 CDS HMPREF0868_0315 NC_013895.2 1531411 1532283 R identified by match to protein family HMM PF00528; ABC transporter permease complement(1531411..1532283) Clostridiales genomosp. BVAB3 str. UPII9-5 8811185 YP_003474652.1 CDS HMPREF0868_0314 NC_013895.2 1532285 1533181 R identified by match to protein family HMM PF00528; ABC transporter permease complement(1532285..1533181) Clostridiales genomosp. BVAB3 str. UPII9-5 8811112 YP_003474651.1 CDS HMPREF0868_0313 NC_013895.2 1533178 1535997 R identified by match to protein family HMM PF01547; extracellular solute-binding protein complement(1533178..1535997) Clostridiales genomosp. BVAB3 str. UPII9-5 8810215 YP_003474650.1 CDS HMPREF0868_0312 NC_013895.2 1536042 1538357 R identified by match to protein family HMM PF00933; match to protein family HMM PF01915; overlaps another CDS with the same product name; glycosyl hydrolase family 3 protein complement(1536042..1538357) Clostridiales genomosp. BVAB3 str. UPII9-5 8811069 YP_003474649.1 CDS HMPREF0868_0311 NC_013895.2 1538347 1540554 R identified by match to protein family HMM PF00933; match to protein family HMM PF01915; overlaps another CDS with the same product name; glycosyl hydrolase family 3 protein complement(1538347..1540554) Clostridiales genomosp. BVAB3 str. UPII9-5 8810704 YP_003474648.1 CDS HMPREF0868_0310 NC_013895.2 1540566 1542455 R hypothetical protein complement(1540566..1542455) Clostridiales genomosp. BVAB3 str. UPII9-5 8810870 YP_003474647.1 CDS HMPREF0868_0309 NC_013895.2 1542773 1543642 R identified by match to protein family HMM PF00165; match to protein family HMM PF02311; match to protein family HMM PF07883; AraC family transcriptional regulator complement(1542773..1543642) Clostridiales genomosp. BVAB3 str. UPII9-5 8811137 YP_003474646.1 CDS HMPREF0868_0308 NC_013895.2 1543859 1544638 R identified by match to protein family HMM PF00072; match to protein family HMM PF00165; response regulator receiver domain-containing protein complement(1543859..1544638) Clostridiales genomosp. BVAB3 str. UPII9-5 8811345 YP_003474645.1 CDS HMPREF0868_0307 NC_013895.2 1544676 1546787 R identified by match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF06580; ATPase/histidine kinase/DNA gyrase B/HSP90 domain-containing protein complement(1544676..1546787) Clostridiales genomosp. BVAB3 str. UPII9-5 8811360 YP_003474644.1 CDS HMPREF0868_0306 NC_013895.2 1546945 1547124 D hypothetical protein 1546945..1547124 Clostridiales genomosp. BVAB3 str. UPII9-5 8810632 YP_003474643.1 CDS HMPREF0868_0305 NC_013895.2 1547229 1547627 D hypothetical protein 1547229..1547627 Clostridiales genomosp. BVAB3 str. UPII9-5 8811298 YP_003474642.1 CDS HMPREF0868_0304 NC_013895.2 1547709 1548482 D hypothetical protein 1547709..1548482 Clostridiales genomosp. BVAB3 str. UPII9-5 8811018 YP_003474641.1 CDS HMPREF0868_0303 NC_013895.2 1548487 1549272 D hypothetical protein 1548487..1549272 Clostridiales genomosp. BVAB3 str. UPII9-5 8811099 YP_003474640.1 CDS HMPREF0868_0302 NC_013895.2 1549276 1549914 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1549276..1549914 Clostridiales genomosp. BVAB3 str. UPII9-5 8809988 YP_003474639.1 CDS HMPREF0868_0301 NC_013895.2 1550200 1551864 R identified by match to protein family HMM PF00528; ABC transporter permease complement(1550200..1551864) Clostridiales genomosp. BVAB3 str. UPII9-5 8811335 YP_003474638.1 CDS HMPREF0868_0300 NC_013895.2 1551851 1552990 R identified by match to protein family HMM PF00005; match to protein family HMM PF08402; ABC transporter ATP-binding protein complement(1551851..1552990) Clostridiales genomosp. BVAB3 str. UPII9-5 8810653 YP_003474637.1 CDS HMPREF0868_0299 NC_013895.2 1553111 1554217 R identified by match to protein family HMM PF01547; extracellular solute-binding protein complement(1553111..1554217) Clostridiales genomosp. BVAB3 str. UPII9-5 8810663 YP_003474636.1 CDS HMPREF0868_0298 NC_013895.2 1554479 1557955 R identified by match to protein family HMM PF05738; LPXTG-motif cell wall anchor domain-containing protein complement(1554479..1557955) Clostridiales genomosp. BVAB3 str. UPII9-5 8810480 YP_003474635.1 CDS HMPREF0868_0297 NC_013895.2 1558142 1558255 R hypothetical protein complement(1558142..1558255) Clostridiales genomosp. BVAB3 str. UPII9-5 8810464 YP_003474634.1 CDS HMPREF0868_0296 NC_013895.2 1558374 1559966 R identified by match to protein family HMM PF00746; match to protein family HMM PF09479; match to protein family HMM TIGR01167; match to protein family HMM TIGR02543; hypothetical protein complement(1558374..1559966) Clostridiales genomosp. BVAB3 str. UPII9-5 8811357 YP_003474633.1 CDS HMPREF0868_0295 NC_013895.2 1560307 1561404 R identified by match to protein family HMM PF01385; match to protein family HMM PF07282; match to protein family HMM TIGR01766; transposase, IS605 OrfB family protein complement(1560307..1561404) Clostridiales genomosp. BVAB3 str. UPII9-5 8810679 YP_003474632.1 CDS HMPREF0868_0294 NC_013895.2 1561550 1562725 R putative lipoprotein complement(1561550..1562725) Clostridiales genomosp. BVAB3 str. UPII9-5 8810042 YP_003474631.1 CDS HMPREF0868_0293 NC_013895.2 1562838 1563521 R hypothetical protein complement(1562838..1563521) Clostridiales genomosp. BVAB3 str. UPII9-5 8810108 YP_003474630.1 CDS HMPREF0868_0292 NC_013895.2 1563977 1565287 D identified by match to protein family HMM PF02388; FemAB family protein 1563977..1565287 Clostridiales genomosp. BVAB3 str. UPII9-5 8810992 YP_003474629.1 CDS HMPREF0868_0291 NC_013895.2 1565304 1566545 D hypothetical protein 1565304..1566545 Clostridiales genomosp. BVAB3 str. UPII9-5 8810249 YP_003474628.1 CDS HMPREF0868_0290 NC_013895.2 1566614 1568740 R identified by match to protein family HMM PF09479; hypothetical protein complement(1566614..1568740) Clostridiales genomosp. BVAB3 str. UPII9-5 8811184 YP_003474627.1 CDS HMPREF0868_0289 NC_013895.2 1568776 1569516 R identified by match to protein family HMM PF00072; match to protein family HMM PF00165; response regulator receiver domain-containing protein complement(1568776..1569516) Clostridiales genomosp. BVAB3 str. UPII9-5 8811180 YP_003474626.1 CDS HMPREF0868_0288 NC_013895.2 1569574 1571571 R identified by match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF06580; ATPase/histidine kinase/DNA gyrase B/HSP90 domain-containing protein complement(1569574..1571571) Clostridiales genomosp. BVAB3 str. UPII9-5 8810196 YP_003474625.1 CDS HMPREF0868_0287 NC_013895.2 1571568 1572599 R identified by match to protein family HMM PF01547; extracellular solute-binding protein complement(1571568..1572599) Clostridiales genomosp. BVAB3 str. UPII9-5 8810571 YP_003474624.1 CDS HMPREF0868_0286 NC_013895.2 1572718 1574361 R identified by match to protein family HMM PF00005; match to protein family HMM PF08402; ABC transporter ATP-binding protein complement(1572718..1574361) Clostridiales genomosp. BVAB3 str. UPII9-5 8810012 YP_003474623.1 CDS HMPREF0868_0285 NC_013895.2 1574366 1576189 R identified by match to protein family HMM PF00528; ABC transporter permease complement(1574366..1576189) Clostridiales genomosp. BVAB3 str. UPII9-5 8810360 YP_003474622.1 CDS HMPREF0868_0284 NC_013895.2 1576361 1577731 R putative lipoprotein complement(1576361..1577731) Clostridiales genomosp. BVAB3 str. UPII9-5 8811398 YP_003474621.1 CDS HMPREF0868_0283 NC_013895.2 1578050 1581532 R hypothetical protein complement(1578050..1581532) Clostridiales genomosp. BVAB3 str. UPII9-5 8810142 YP_003474620.1 CDS HMPREF0868_0282 NC_013895.2 1581734 1582336 D identified by match to protein family HMM PF08876; hypothetical protein 1581734..1582336 Clostridiales genomosp. BVAB3 str. UPII9-5 8811192 YP_003474619.1 CDS HMPREF0868_0281 NC_013895.2 1582333 1584294 D identified by match to protein family HMM PF00501; AMP-binding enzyme 1582333..1584294 Clostridiales genomosp. BVAB3 str. UPII9-5 8810869 YP_003474618.1 CDS HMPREF0868_0280 NC_013895.2 1584652 1585461 D identified by match to protein family HMM PF01978; sugar-specific transcriptional regulator, TrmB family 1584652..1585461 Clostridiales genomosp. BVAB3 str. UPII9-5 8810150 YP_003474617.1 CDS HMPREF0868_0279 NC_013895.2 1585475 1586362 D hypothetical protein 1585475..1586362 Clostridiales genomosp. BVAB3 str. UPII9-5 8811367 YP_003474616.1 CDS HMPREF0868_0278 NC_013895.2 1586359 1587357 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF02423; ornithine cyclodeaminase 1586359..1587357 Clostridiales genomosp. BVAB3 str. UPII9-5 8810487 YP_003474615.1 CDS xylB NC_013895.2 1587546 1589006 R identified by match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01312; xylulokinase complement(1587546..1589006) Clostridiales genomosp. BVAB3 str. UPII9-5 8811200 YP_003474614.1 CDS xylA NC_013895.2 1589122 1590444 R identified by match to protein family HMM PF01261; match to protein family HMM TIGR02630; xylose isomerase complement(1589122..1590444) Clostridiales genomosp. BVAB3 str. UPII9-5 8811003 YP_003474613.1 CDS nhaC_2 NC_013895.2 1590479 1591927 R identified by match to protein family HMM PF03553; match to protein family HMM TIGR00931; Na+/H+ antiporter NhaC complement(1590479..1591927) Clostridiales genomosp. BVAB3 str. UPII9-5 8810291 YP_003474612.1 CDS HMPREF0868_0274 NC_013895.2 1591924 1593087 R identified by match to protein family HMM PF00155; class I/II aminotransferase complement(1591924..1593087) Clostridiales genomosp. BVAB3 str. UPII9-5 8810951 YP_003474611.1 CDS HMPREF0868_0273 NC_013895.2 1593119 1594090 R identified by match to protein family HMM PF01263; aldose 1-epimerase complement(1593119..1594090) Clostridiales genomosp. BVAB3 str. UPII9-5 8810091 YP_003474610.1 CDS HMPREF0868_0272 NC_013895.2 1594389 1595543 R identified by match to protein family HMM PF00480; ROK family protein complement(1594389..1595543) Clostridiales genomosp. BVAB3 str. UPII9-5 8810281 YP_003474609.1 CDS HMPREF0868_0271 NC_013895.2 1595563 1595709 R hypothetical protein complement(1595563..1595709) Clostridiales genomosp. BVAB3 str. UPII9-5 8810937 YP_003474608.1 CDS HMPREF0868_0270 NC_013895.2 1595824 1596570 D identified by match to protein family HMM PF01048; putative purine nucleoside phosphorylase 1595824..1596570 Clostridiales genomosp. BVAB3 str. UPII9-5 8811394 YP_003474607.1 CDS HMPREF0868_0269 NC_013895.2 1596639 1597571 R identified by match to protein family HMM PF01156; putative cytidine/uridine-specific hydrolase complement(1596639..1597571) Clostridiales genomosp. BVAB3 str. UPII9-5 8810234 YP_003474606.1 CDS HMPREF0868_0268 NC_013895.2 1597702 1598688 R identified by match to protein family HMM PF01156; putative cytidine/uridine-specific hydrolase complement(1597702..1598688) Clostridiales genomosp. BVAB3 str. UPII9-5 8809978 YP_003474605.1 CDS HMPREF0868_0267 NC_013895.2 1598700 1599701 R identified by match to protein family HMM PF02653; branched-chain amino acid ABC transporter permease complement(1598700..1599701) Clostridiales genomosp. BVAB3 str. UPII9-5 8810964 YP_003474604.1 CDS HMPREF0868_0266 NC_013895.2 1599703 1600890 R identified by match to protein family HMM PF02653; branched-chain amino acid ABC transporter permease complement(1599703..1600890) Clostridiales genomosp. BVAB3 str. UPII9-5 8811414 YP_003474603.1 CDS HMPREF0868_0265 NC_013895.2 1600883 1602439 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(1600883..1602439) Clostridiales genomosp. BVAB3 str. UPII9-5 8810640 YP_003474602.1 CDS HMPREF0868_0264 NC_013895.2 1602510 1603691 R identified by match to protein family HMM PF02608; basic membrane protein complement(1602510..1603691) Clostridiales genomosp. BVAB3 str. UPII9-5 8810657 YP_003474601.1 CDS HMPREF0868_0263 NC_013895.2 1603743 1604747 R identified by match to protein family HMM PF00294; putative ribokinase complement(1603743..1604747) Clostridiales genomosp. BVAB3 str. UPII9-5 8811392 YP_003474600.1 CDS HMPREF0868_0262 NC_013895.2 1604961 1606754 R identified by match to protein family HMM PF06100; hypothetical protein complement(1604961..1606754) Clostridiales genomosp. BVAB3 str. UPII9-5 8810461 YP_003474599.1 CDS HMPREF0868_0261 NC_013895.2 1606867 1607457 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(1606867..1607457) Clostridiales genomosp. BVAB3 str. UPII9-5 8811115 YP_003474598.1 CDS HMPREF0868_0260 NC_013895.2 1607597 1608043 R hypothetical protein complement(1607597..1608043) Clostridiales genomosp. BVAB3 str. UPII9-5 8811035 YP_003474597.1 CDS HMPREF0868_0259 NC_013895.2 1608044 1608259 R identified by match to protein family HMM PF01381; Xre family toxin-antitoxin system antitoxin protein complement(1608044..1608259) Clostridiales genomosp. BVAB3 str. UPII9-5 8810977 YP_003474596.1 CDS HMPREF0868_0258 NC_013895.2 1609139 1610974 R identified by match to protein family HMM PF09479; hypothetical protein complement(1609139..1610974) Clostridiales genomosp. BVAB3 str. UPII9-5 8810081 YP_003474595.1 CDS HMPREF0868_0257 NC_013895.2 1611424 1611651 D hypothetical protein 1611424..1611651 Clostridiales genomosp. BVAB3 str. UPII9-5 8810831 YP_003474594.1 CDS HMPREF0868_0256 NC_013895.2 1612109 1612540 R identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369; hypothetical protein complement(1612109..1612540) Clostridiales genomosp. BVAB3 str. UPII9-5 8810928 YP_003474593.1 CDS lgt NC_013895.2 1612563 1613690 R identified by match to protein family HMM PF01790; match to protein family HMM TIGR00544; prolipoprotein diacylglyceryl transferase complement(1612563..1613690) Clostridiales genomosp. BVAB3 str. UPII9-5 8810334 YP_003474592.1 CDS HMPREF0868_0254 NC_013895.2 1613698 1615092 R identified by match to protein family HMM PF00675; match to protein family HMM PF05193; peptidase M16 inactive domain-containing protein complement(1613698..1615092) Clostridiales genomosp. BVAB3 str. UPII9-5 8810396 YP_003474591.1 CDS ribF NC_013895.2 1615074 1617437 R identified by match to protein family HMM PF01687; match to protein family HMM PF05193; match to protein family HMM PF06574; match to protein family HMM TIGR00083; riboflavin biosynthesis protein RibF complement(1615074..1617437) Clostridiales genomosp. BVAB3 str. UPII9-5 8811293 YP_003474590.1 CDS truB NC_013895.2 1617418 1618560 R identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431; tRNA pseudouridine synthase B complement(1617418..1618560) Clostridiales genomosp. BVAB3 str. UPII9-5 8811252 YP_003474589.2 CDS HMPREF0868_0251 NC_013895.2 1618645 1619685 R identified by match to protein family HMM PF01368; match to protein family HMM PF02272; DHHA1 domain-containing protein complement(1618645..1619685) Clostridiales genomosp. BVAB3 str. UPII9-5 8810545 YP_003474588.1 CDS rbfA NC_013895.2 1619678 1620091 R identified by match to protein family HMM PF02033; match to protein family HMM TIGR00082; ribosome-binding factor A complement(1619678..1620091) Clostridiales genomosp. BVAB3 str. UPII9-5 8810787 YP_003474587.1 CDS infB NC_013895.2 1620093 1623560 R identified by match to protein family HMM PF00009; match to protein family HMM PF01926; match to protein family HMM PF03144; match to protein family HMM PF04760; match to protein family HMM TIGR00231; match to protein family HMM TIGR00487; translation initiation factor IF-2 complement(1620093..1623560) Clostridiales genomosp. BVAB3 str. UPII9-5 8811034 YP_003474586.1 CDS HMPREF0868_0248 NC_013895.2 1623812 1624516 R identified by match to protein family HMM PF01248; match to protein family HMM PF04296; hypothetical protein complement(1623812..1624516) Clostridiales genomosp. BVAB3 str. UPII9-5 8810868 YP_003474585.1 CDS nusA NC_013895.2 1624500 1625618 R identified by match to protein family HMM PF08529; match to protein family HMM TIGR01953; transcription termination factor NusA complement(1624500..1625618) Clostridiales genomosp. BVAB3 str. UPII9-5 8810597 YP_003474584.1 CDS HMPREF0868_0246 NC_013895.2 1625675 1626142 R identified by match to protein family HMM PF02576; hypothetical protein complement(1625675..1626142) Clostridiales genomosp. BVAB3 str. UPII9-5 8810380 YP_003474583.1 CDS HMPREF0868_0245 NC_013895.2 1626585 1626869 D identified by match to protein family HMM PF04221; match to protein family HMM TIGR02384; putative toxin-antitoxin system antitoxin component ribbon-helix-helix domain-containing protein 1626585..1626869 Clostridiales genomosp. BVAB3 str. UPII9-5 8811120 YP_003474582.1 CDS HMPREF0868_0244 NC_013895.2 1627188 1627598 D hypothetical protein 1627188..1627598 Clostridiales genomosp. BVAB3 str. UPII9-5 8811255 YP_003474581.1 CDS HMPREF0868_0243 NC_013895.2 1627813 1629375 R identified by match to protein family HMM PF00496; family 5 extracellular solute-binding protein complement(1627813..1629375) Clostridiales genomosp. BVAB3 str. UPII9-5 8810749 YP_003474580.1 CDS HMPREF0868_0242 NC_013895.2 1629393 1630052 R identified by match to protein family HMM PF00005; putative lipoprotein releasing system, ATP-binding protein complement(1629393..1630052) Clostridiales genomosp. BVAB3 str. UPII9-5 8810007 YP_003474579.1 CDS HMPREF0868_0241 NC_013895.2 1630052 1631257 R identified by match to protein family HMM PF02687; efflux ABC transporter permease complement(1630052..1631257) Clostridiales genomosp. BVAB3 str. UPII9-5 8810054 YP_003474578.1 CDS HMPREF0868_0240 NC_013895.2 1631365 1631817 R hypothetical protein complement(1631365..1631817) Clostridiales genomosp. BVAB3 str. UPII9-5 8810660 YP_003474577.1 CDS HMPREF0868_0239 NC_013895.2 1631930 1632361 R identified by match to protein family HMM PF04205; FMN-binding domain-containing protein complement(1631930..1632361) Clostridiales genomosp. BVAB3 str. UPII9-5 8810955 YP_003474576.1 CDS HMPREF0868_0238 NC_013895.2 1632771 1633505 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(1632771..1633505) Clostridiales genomosp. BVAB3 str. UPII9-5 8810474 YP_003474575.1 CDS HMPREF0868_0237 NC_013895.2 1633588 1634790 R identified by match to protein family HMM PF02687; efflux ABC transporter permease complement(1633588..1634790) Clostridiales genomosp. BVAB3 str. UPII9-5 8810254 YP_003474574.1 CDS HMPREF0868_0236 NC_013895.2 1634797 1636080 R identified by match to protein family HMM PF02687; efflux ABC transporter permease complement(1634797..1636080) Clostridiales genomosp. BVAB3 str. UPII9-5 8811016 YP_003474573.1 CDS HMPREF0868_0235 NC_013895.2 1636082 1637428 R hypothetical protein complement(1636082..1637428) Clostridiales genomosp. BVAB3 str. UPII9-5 8810125 YP_003474572.1 CDS HMPREF0868_0234 NC_013895.2 1637510 1638274 R pathogen-specific surface antigen family protein complement(1637510..1638274) Clostridiales genomosp. BVAB3 str. UPII9-5 8810812 YP_003474571.1 CDS HMPREF0868_0233 NC_013895.2 1638436 1639839 R identified by match to protein family HMM PF03239; FTR1 family protein complement(1638436..1639839) Clostridiales genomosp. BVAB3 str. UPII9-5 8811465 YP_003474570.1 CDS HMPREF0868_0232 NC_013895.2 1640422 1641471 R hypothetical protein complement(1640422..1641471) Clostridiales genomosp. BVAB3 str. UPII9-5 8810421 YP_003474569.1 CDS HMPREF0868_0231 NC_013895.2 1641495 1648532 R hypothetical protein complement(1641495..1648532) Clostridiales genomosp. BVAB3 str. UPII9-5 8811498 YP_003474568.1 CDS HMPREF0868_0230 NC_013895.2 1648896 1655120 R hypothetical protein complement(1648896..1655120) Clostridiales genomosp. BVAB3 str. UPII9-5 8811276 YP_003474567.1 CDS HMPREF0868_0229 NC_013895.2 1655522 1656442 D identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR substrate binding domain-containing protein 1655522..1656442 Clostridiales genomosp. BVAB3 str. UPII9-5 8810153 YP_003474566.1 CDS HMPREF0868_0228 NC_013895.2 1656524 1659001 R identified by match to protein family HMM PF01055; glycosyl hydrolase family 31 protein complement(1656524..1659001) Clostridiales genomosp. BVAB3 str. UPII9-5 8811072 YP_003474565.1 CDS HMPREF0868_0227 NC_013895.2 1658982 1659149 D hypothetical protein 1658982..1659149 Clostridiales genomosp. BVAB3 str. UPII9-5 8810056 YP_003474564.1 CDS HMPREF0868_0226 NC_013895.2 1659317 1660774 D identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein 1659317..1660774 Clostridiales genomosp. BVAB3 str. UPII9-5 8811068 YP_003474563.1 CDS HMPREF0868_0225 NC_013895.2 1660790 1662088 R identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein complement(1660790..1662088) Clostridiales genomosp. BVAB3 str. UPII9-5 8811495 YP_003933658.1 CDS HMPREF0868_0224 NC_013895.2 1662096 1663067 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(1662096..1663067) Clostridiales genomosp. BVAB3 str. UPII9-5 8810738 YP_003474562.1 CDS HMPREF0868_0223 NC_013895.2 1663088 1663921 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(1663088..1663921) Clostridiales genomosp. BVAB3 str. UPII9-5 8811482 YP_003474561.1 CDS HMPREF0868_0222 NC_013895.2 1663921 1665471 R identified by match to protein family HMM PF00496; family 5 extracellular solute-binding protein complement(1663921..1665471) Clostridiales genomosp. BVAB3 str. UPII9-5 8810619 YP_003474560.1 CDS HMPREF0868_0221 NC_013895.2 1665501 1666502 R identified by match to protein family HMM PF00528; ABC transporter permease complement(1665501..1666502) Clostridiales genomosp. BVAB3 str. UPII9-5 8811305 YP_003474559.1 CDS HMPREF0868_0220 NC_013895.2 1666489 1667433 R identified by match to protein family HMM PF00528; ABC transporter permease complement(1666489..1667433) Clostridiales genomosp. BVAB3 str. UPII9-5 8810353 YP_003474558.1 CDS HMPREF0868_0219 NC_013895.2 1667454 1668284 R identified by match to protein family HMM PF05175; match to protein family HMM PF08241; match to protein family HMM PF08242; methyltransferase domain-containing protein complement(1667454..1668284) Clostridiales genomosp. BVAB3 str. UPII9-5 8811098 YP_003474557.1 CDS HMPREF0868_0218 NC_013895.2 1668523 1669494 D identified by match to protein family HMM PF00056; match to protein family HMM PF02866; match to protein family HMM TIGR01771; L-lactate dehydrogenase 1668523..1669494 Clostridiales genomosp. BVAB3 str. UPII9-5 8810194 YP_003474556.1 CDS HMPREF0868_0217 NC_013895.2 1669914 1671998 D identified by match to protein family HMM PF00501; AMP-binding enzyme 1669914..1671998 Clostridiales genomosp. BVAB3 str. UPII9-5 8810904 YP_003474555.1 CDS HMPREF0868_0215 NC_013895.2 1672146 1672379 D hypothetical protein 1672146..1672379 Clostridiales genomosp. BVAB3 str. UPII9-5 8810898 YP_003474554.1 CDS HMPREF0868_0216 NC_013895.2 1672355 1673086 R identified by match to protein family HMM PF01381; DNA-binding helix-turn-helix protein complement(1672355..1673086) Clostridiales genomosp. BVAB3 str. UPII9-5 8810158 YP_003474553.1 CDS HMPREF0868_0214 NC_013895.2 1673303 1674526 D identified by match to protein family HMM PF00155; putative cystathionine beta-lyase PatB 1673303..1674526 Clostridiales genomosp. BVAB3 str. UPII9-5 8811028 YP_003474552.1 CDS HMPREF0868_0213 NC_013895.2 1674598 1675272 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(1674598..1675272) Clostridiales genomosp. BVAB3 str. UPII9-5 8810047 YP_003474551.1 CDS nifH NC_013895.2 1675458 1676291 D identified by match to protein family HMM PF00142; nitrogenase iron protein 1 1675458..1676291 Clostridiales genomosp. BVAB3 str. UPII9-5 8810739 YP_003474550.1 CDS HMPREF0868_0211 NC_013895.2 1676288 1677433 D identified by match to protein family HMM PF01497; periplasmic binding protein 1676288..1677433 Clostridiales genomosp. BVAB3 str. UPII9-5 8810041 YP_003474549.1 CDS HMPREF0868_0210 NC_013895.2 1677448 1678494 D identified by match to protein family HMM PF01032; iron(III) dicitrate transport system permease FecD family protein 1677448..1678494 Clostridiales genomosp. BVAB3 str. UPII9-5 8810544 YP_003474548.1 CDS HMPREF0868_0209 NC_013895.2 1678512 1679339 D identified by match to protein family HMM PF00005; putative ferrichrome ATP binding cassette transporter, ABC protein FhuC 1678512..1679339 Clostridiales genomosp. BVAB3 str. UPII9-5 8811425 YP_003474547.1 CDS HMPREF0868_0208 NC_013895.2 1679371 1680750 D identified by match to protein family HMM PF00148; overlaps another CDS with the same product name; nitrogenase component 1 oxidoreductase 1679371..1680750 Clostridiales genomosp. BVAB3 str. UPII9-5 8810408 YP_003474546.1 CDS HMPREF0868_0207 NC_013895.2 1680737 1682014 D identified by match to protein family HMM PF00148; overlaps another CDS with the same product name; nitrogenase component 1 oxidoreductase 1680737..1682014 Clostridiales genomosp. BVAB3 str. UPII9-5 8811254 YP_003474545.1 CDS HMPREF0868_0206 NC_013895.2 1682077 1682679 D hypothetical protein 1682077..1682679 Clostridiales genomosp. BVAB3 str. UPII9-5 8809995 YP_003474544.1 CDS HMPREF0868_0205 NC_013895.2 1682679 1682828 D hypothetical protein 1682679..1682828 Clostridiales genomosp. BVAB3 str. UPII9-5 8811107 YP_003474543.1 CDS HMPREF0868_0204 NC_013895.2 1682841 1683758 R identified by match to protein family HMM PF00892; hypothetical protein complement(1682841..1683758) Clostridiales genomosp. BVAB3 str. UPII9-5 8810087 YP_003474542.1 CDS HMPREF0868_0203 NC_013895.2 1684117 1688121 D identified by match to protein family HMM PF09479; match to protein family HMM TIGR02543; hypothetical protein 1684117..1688121 Clostridiales genomosp. BVAB3 str. UPII9-5 8810403 YP_003474541.1 CDS HMPREF0868_0202 NC_013895.2 1688231 1688752 D identified by match to protein family HMM PF00857; isochorismatase family protein 1688231..1688752 Clostridiales genomosp. BVAB3 str. UPII9-5 8811279 YP_003933659.1 CDS HMPREF0868_0201 NC_013895.2 1688921 1689397 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; hypothetical protein complement(1688921..1689397) Clostridiales genomosp. BVAB3 str. UPII9-5 8810261 YP_003474540.1 CDS HMPREF0868_0200 NC_013895.2 1689398 1690186 R hypothetical protein complement(1689398..1690186) Clostridiales genomosp. BVAB3 str. UPII9-5 8810752 YP_003474539.1 CDS HMPREF0868_0199 NC_013895.2 1690179 1691441 R identified by match to protein family HMM PF01546; match to protein family HMM PF07687; amidohydrolase complement(1690179..1691441) Clostridiales genomosp. BVAB3 str. UPII9-5 8810036 YP_003933660.1 CDS HMPREF0868_0198 NC_013895.2 1691452 1694109 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM TIGR01376; hypothetical protein complement(1691452..1694109) Clostridiales genomosp. BVAB3 str. UPII9-5 8811348 YP_003474538.1 CDS HMPREF0868_0197 NC_013895.2 1694264 1695271 R identified by match to protein family HMM PF00929; exonuclease complement(1694264..1695271) Clostridiales genomosp. BVAB3 str. UPII9-5 8810389 YP_003474537.1 CDS rpoC NC_013895.2 1695486 1699190 R identified by match to protein family HMM PF00623; match to protein family HMM PF04983; match to protein family HMM PF04997; match to protein family HMM PF04998; match to protein family HMM PF05000; match to protein family HMM TIGR02386; DNA-directed RNA polymerase subunit beta' complement(1695486..1699190) Clostridiales genomosp. BVAB3 str. UPII9-5 8811277 YP_003474536.1 CDS rpoB NC_013895.2 1699217 1702981 R identified by match to protein family HMM PF00562; match to protein family HMM PF04560; match to protein family HMM PF04561; match to protein family HMM PF04563; match to protein family HMM PF04565; match to protein family HMM TIGR02013; DNA-directed RNA polymerase subunit beta complement(1699217..1702981) Clostridiales genomosp. BVAB3 str. UPII9-5 8810193 YP_003474535.1 CDS HMPREF0868_0194 NC_013895.2 1703017 1703136 D hypothetical protein 1703017..1703136 Clostridiales genomosp. BVAB3 str. UPII9-5 8810010 YP_003474534.1 CDS HMPREF0868_0193 NC_013895.2 1703254 1703373 R hypothetical protein complement(1703254..1703373) Clostridiales genomosp. BVAB3 str. UPII9-5 8811492 YP_003474533.1 CDS HMPREF0868_0192 NC_013895.2 1703722 1705365 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein complement(1703722..1705365) Clostridiales genomosp. BVAB3 str. UPII9-5 8810593 YP_003474532.1 CDS HMPREF0868_0191 NC_013895.2 1705401 1706843 R identified by match to protein family HMM PF03572; S41 family peptidase complement(1705401..1706843) Clostridiales genomosp. BVAB3 str. UPII9-5 8810366 YP_003474531.1 CDS HMPREF0868_0190 NC_013895.2 1707583 1708926 R identified by match to protein family HMM PF04055; radical SAM domain-containing protein complement(1707583..1708926) Clostridiales genomosp. BVAB3 str. UPII9-5 8809979 YP_003474530.1 CDS HMPREF0868_0189 NC_013895.2 1709068 1709202 D hypothetical protein 1709068..1709202 Clostridiales genomosp. BVAB3 str. UPII9-5 8811044 YP_003474529.1 CDS HMPREF0868_0188 NC_013895.2 1709663 1710730 R hypothetical protein complement(1709663..1710730) Clostridiales genomosp. BVAB3 str. UPII9-5 8811318 YP_003933661.1 CDS HMPREF0868_0187 NC_013895.2 1710754 1717074 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(1710754..1717074) Clostridiales genomosp. BVAB3 str. UPII9-5 8810862 YP_003474528.1 CDS tdk NC_013895.2 1717439 1718095 D identified by match to protein family HMM PF00265; thymidine kinase 1717439..1718095 Clostridiales genomosp. BVAB3 str. UPII9-5 8811510 YP_003474527.1 CDS HMPREF0868_0185 NC_013895.2 1718200 1719753 R identified by match to protein family HMM PF00128; alpha amylase catalytic subunit complement(1718200..1719753) Clostridiales genomosp. BVAB3 str. UPII9-5 8810391 YP_003474526.1 CDS HMPREF0868_0184 NC_013895.2 1719804 1719986 R hypothetical protein complement(1719804..1719986) Clostridiales genomosp. BVAB3 str. UPII9-5 8811229 YP_003474525.1 CDS HMPREF0868_0183 NC_013895.2 1720038 1720898 R identified by match to protein family HMM PF00528; ABC transporter permease complement(1720038..1720898) Clostridiales genomosp. BVAB3 str. UPII9-5 8810168 YP_003474524.1 CDS HMPREF0868_0182 NC_013895.2 1720895 1722301 R identified by match to protein family HMM PF00528; ABC transporter permease complement(1720895..1722301) Clostridiales genomosp. BVAB3 str. UPII9-5 8811059 YP_003474523.1 CDS HMPREF0868_0181 NC_013895.2 1722368 1723618 R identified by match to protein family HMM PF01547; extracellular solute-binding protein complement(1722368..1723618) Clostridiales genomosp. BVAB3 str. UPII9-5 8810111 YP_003474522.1 CDS pulA_2 NC_013895.2 1724039 1727758 R identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02104; pullulanase complement(1724039..1727758) Clostridiales genomosp. BVAB3 str. UPII9-5 8810905 YP_003474521.1 CDS HMPREF0868_0179 NC_013895.2 1727864 1729627 R hypothetical protein complement(1727864..1729627) Clostridiales genomosp. BVAB3 str. UPII9-5 8811060 YP_003474520.1 CDS HMPREF0868_0178 NC_013895.2 1729825 1731702 R identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471; hypothetical protein complement(1729825..1731702) Clostridiales genomosp. BVAB3 str. UPII9-5 8810356 YP_003474519.1 CDS HMPREF0868_0177 NC_013895.2 1731816 1732310 R hypothetical protein complement(1731816..1732310) Clostridiales genomosp. BVAB3 str. UPII9-5 8810796 YP_003474518.1 CDS HMPREF0868_0176 NC_013895.2 1732852 1734249 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; ATPase/histidine kinase/DNA gyrase B/HSP90 domain-containing protein complement(1732852..1734249) Clostridiales genomosp. BVAB3 str. UPII9-5 8810011 YP_003474517.1 CDS HMPREF0868_0175 NC_013895.2 1734256 1734957 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; putative sensory transduction protein RegX3 complement(1734256..1734957) Clostridiales genomosp. BVAB3 str. UPII9-5 8810854 YP_003474516.1 CDS bcrA NC_013895.2 1735098 1735862 D identified by match to protein family HMM PF00005; bacitracin transport ATP-binding protein BcrA 1735098..1735862 Clostridiales genomosp. BVAB3 str. UPII9-5 8810612 YP_003474515.1 CDS HMPREF0868_0173 NC_013895.2 1735859 1736584 D hypothetical protein 1735859..1736584 Clostridiales genomosp. BVAB3 str. UPII9-5 8811433 YP_003474514.1 CDS HMPREF0868_0172 NC_013895.2 1736598 1737362 D hypothetical protein 1736598..1737362 Clostridiales genomosp. BVAB3 str. UPII9-5 8810349 YP_003474513.1 CDS HMPREF0868_0171 NC_013895.2 1737473 1738684 R hypothetical protein complement(1737473..1738684) Clostridiales genomosp. BVAB3 str. UPII9-5 8811258 YP_003933662.1 CDS HMPREF0868_0170 NC_013895.2 1738761 1738961 R hypothetical protein complement(1738761..1738961) Clostridiales genomosp. BVAB3 str. UPII9-5 8810925 YP_003474512.1 CDS HMPREF0868_0169 NC_013895.2 1739307 1739525 R hypothetical protein complement(1739307..1739525) Clostridiales genomosp. BVAB3 str. UPII9-5 8810258 YP_003474511.1 CDS HMPREF0868_0168 NC_013895.2 1739518 1739853 R hypothetical protein complement(1739518..1739853) Clostridiales genomosp. BVAB3 str. UPII9-5 8810882 YP_003474510.1 CDS HMPREF0868_0167 NC_013895.2 1739853 1740227 R hypothetical protein complement(1739853..1740227) Clostridiales genomosp. BVAB3 str. UPII9-5 8810077 YP_003474509.1 CDS HMPREF0868_0166 NC_013895.2 1740227 1740613 R hypothetical protein complement(1740227..1740613) Clostridiales genomosp. BVAB3 str. UPII9-5 8810318 YP_003933663.1 CDS HMPREF0868_0165 NC_013895.2 1740613 1741068 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(1740613..1741068) Clostridiales genomosp. BVAB3 str. UPII9-5 8811155 YP_003474508.1 CDS HMPREF0868_0164 NC_013895.2 1741394 1741522 D hypothetical protein 1741394..1741522 Clostridiales genomosp. BVAB3 str. UPII9-5 8810586 YP_003474507.1 CDS HMPREF0868_0163 NC_013895.2 1741638 1742222 R identified by match to protein family HMM PF06114; toxin-antitoxin system, toxin component family protein complement(1741638..1742222) Clostridiales genomosp. BVAB3 str. UPII9-5 8811442 YP_003474506.1 CDS HMPREF0868_0162 NC_013895.2 1742215 1742622 R identified by match to protein family HMM PF01381; DNA-binding helix-turn-helix protein complement(1742215..1742622) Clostridiales genomosp. BVAB3 str. UPII9-5 8810825 YP_003474505.1 CDS HMPREF0868_0161 NC_013895.2 1742749 1742949 D putative toxin-antitoxin system antitoxin component ribbon-helix-helix domain-containing protein 1742749..1742949 Clostridiales genomosp. BVAB3 str. UPII9-5 8810157 YP_003474504.1 CDS HMPREF0868_0160 NC_013895.2 1743158 1743790 R identified by match to protein family HMM PF01381; DNA-binding helix-turn-helix protein complement(1743158..1743790) Clostridiales genomosp. BVAB3 str. UPII9-5 8811076 YP_003474503.1 CDS HMPREF0868_0159 NC_013895.2 1744107 1744556 R hypothetical protein complement(1744107..1744556) Clostridiales genomosp. BVAB3 str. UPII9-5 8810393 YP_003474502.1 CDS HMPREF0868_0158 NC_013895.2 1744558 1744758 R identified by match to protein family HMM PF01381; DNA-binding helix-turn-helix protein complement(1744558..1744758) Clostridiales genomosp. BVAB3 str. UPII9-5 8811232 YP_003474501.1 CDS HMPREF0868_0157 NC_013895.2 1745105 1745404 R hypothetical protein complement(1745105..1745404) Clostridiales genomosp. BVAB3 str. UPII9-5 8810561 YP_003933664.1 CDS HMPREF0868_0156 NC_013895.2 1745428 1745628 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(1745428..1745628) Clostridiales genomosp. BVAB3 str. UPII9-5 8810712 YP_003474500.1 CDS HMPREF0868_0155 NC_013895.2 1746135 1747871 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(1746135..1747871) Clostridiales genomosp. BVAB3 str. UPII9-5 8811041 YP_003474499.1 CDS HMPREF0868_0154 NC_013895.2 1747864 1749582 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein complement(1747864..1749582) Clostridiales genomosp. BVAB3 str. UPII9-5 8809943 YP_003474498.1 CDS HMPREF0868_0153 NC_013895.2 1749656 1750315 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(1749656..1750315) Clostridiales genomosp. BVAB3 str. UPII9-5 8810223 YP_003933665.1 CDS HMPREF0868_0152 NC_013895.2 1750523 1750702 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(1750523..1750702) Clostridiales genomosp. BVAB3 str. UPII9-5 8811095 YP_003474497.1 CDS HMPREF0868_0151 NC_013895.2 1751036 1751179 R hypothetical protein complement(1751036..1751179) Clostridiales genomosp. BVAB3 str. UPII9-5 8811419 YP_003474496.1 CDS HMPREF0868_0150 NC_013895.2 1751286 1752494 R identified by match to protein family HMM PF01637; hypothetical protein complement(1751286..1752494) Clostridiales genomosp. BVAB3 str. UPII9-5 8810364 YP_003474495.1 CDS HMPREF0868_0149 NC_013895.2 1752716 1753309 R hypothetical protein complement(1752716..1753309) Clostridiales genomosp. BVAB3 str. UPII9-5 8809997 YP_003933666.1 CDS HMPREF0868_0148 NC_013895.2 1753413 1753976 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(1753413..1753976) Clostridiales genomosp. BVAB3 str. UPII9-5 8810863 YP_003474494.1 CDS HMPREF0868_0147 NC_013895.2 1754313 1757465 R hypothetical protein complement(1754313..1757465) Clostridiales genomosp. BVAB3 str. UPII9-5 8811407 YP_003474493.1 CDS HMPREF0868_0146 NC_013895.2 1757643 1757762 R hypothetical protein complement(1757643..1757762) Clostridiales genomosp. BVAB3 str. UPII9-5 8810968 YP_003474492.1 CDS HMPREF0868_0145 NC_013895.2 1758100 1758684 R identified by match to protein family HMM PF09605; match to protein family HMM TIGR02185; hypothetical protein complement(1758100..1758684) Clostridiales genomosp. BVAB3 str. UPII9-5 8811380 YP_003474491.1 CDS HMPREF0868_0144 NC_013895.2 1758695 1759399 R identified by match to protein family HMM PF02361; cobalt transport protein complement(1758695..1759399) Clostridiales genomosp. BVAB3 str. UPII9-5 8810362 YP_003474490.1 CDS HMPREF0868_0143 NC_013895.2 1759389 1760906 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(1759389..1760906) Clostridiales genomosp. BVAB3 str. UPII9-5 8810790 YP_003474489.1 CDS HMPREF0868_0142 NC_013895.2 1760909 1762618 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein complement(1760909..1762618) Clostridiales genomosp. BVAB3 str. UPII9-5 8810572 YP_003474488.1 CDS HMPREF0868_0141 NC_013895.2 1762611 1764350 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein complement(1762611..1764350) Clostridiales genomosp. BVAB3 str. UPII9-5 8811007 YP_003474487.1 CDS HMPREF0868_0140 NC_013895.2 1764454 1765026 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(1764454..1765026) Clostridiales genomosp. BVAB3 str. UPII9-5 8809963 YP_003474486.1 CDS HMPREF0868_0139 NC_013895.2 1766216 1766419 D identified by match to protein family HMM PF01381; DNA-binding helix-turn-helix protein 1766216..1766419 Clostridiales genomosp. BVAB3 str. UPII9-5 8810884 YP_003474485.1 CDS HMPREF0868_0138 NC_013895.2 1766539 1766853 R identified by match to protein family HMM PF04221; match to protein family HMM TIGR02384; putative toxin-antitoxin system antitoxin component ribbon-helix-helix domain-containing protein complement(1766539..1766853) Clostridiales genomosp. BVAB3 str. UPII9-5 8810024 YP_003933667.1 CDS HMPREF0868_0137 NC_013895.2 1767259 1767420 D an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein 1767259..1767420 Clostridiales genomosp. BVAB3 str. UPII9-5 8811073 YP_003474484.1 CDS HMPREF0868_0136 NC_013895.2 1767730 1768854 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1767730..1768854 Clostridiales genomosp. BVAB3 str. UPII9-5 8811247 YP_003474483.1 CDS HMPREF0868_0135 NC_013895.2 1768979 1769251 R hypothetical protein complement(1768979..1769251) Clostridiales genomosp. BVAB3 str. UPII9-5 8810766 YP_003474482.1 CDS HMPREF0868_0134 NC_013895.2 1769244 1769531 R hypothetical protein complement(1769244..1769531) Clostridiales genomosp. BVAB3 str. UPII9-5 8810055 YP_003474481.1 CDS HMPREF0868_0133 NC_013895.2 1770286 1770417 R hypothetical protein complement(1770286..1770417) Clostridiales genomosp. BVAB3 str. UPII9-5 8810128 YP_003933668.1 CDS HMPREF0868_0131 NC_013895.2 1770532 1770678 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(1770532..1770678) Clostridiales genomosp. BVAB3 str. UPII9-5 8810644 YP_003474479.1 CDS HMPREF0868_0130 NC_013895.2 1770799 1771410 R identified by match to protein family HMM PF08241; match to protein family HMM PF08242; methyltransferase domain-containing protein complement(1770799..1771410) Clostridiales genomosp. BVAB3 str. UPII9-5 8811140 YP_003474478.1 CDS HMPREF0868_0129 NC_013895.2 1771508 1771672 R hypothetical protein complement(1771508..1771672) Clostridiales genomosp. BVAB3 str. UPII9-5 8811152 YP_003474477.1 CDS HMPREF0868_0128 NC_013895.2 1771836 1772300 R identified by match to protein family HMM PF00583; GNAT family acetyltransferase complement(1771836..1772300) Clostridiales genomosp. BVAB3 str. UPII9-5 8810988 YP_003474476.1 CDS HMPREF0868_0127 NC_013895.2 1772401 1772577 R hypothetical protein complement(1772401..1772577) Clostridiales genomosp. BVAB3 str. UPII9-5 8810149 YP_003474475.1 CDS HMPREF0868_0126 NC_013895.2 1773188 1773871 R identified by match to protein family HMM PF00583; GNAT family acetyltransferase complement(1773188..1773871) Clostridiales genomosp. BVAB3 str. UPII9-5 8810631 YP_003474474.1 CDS HMPREF0868_0125 NC_013895.2 1774529 1775152 R hypothetical protein complement(1774529..1775152) Clostridiales genomosp. BVAB3 str. UPII9-5 8809938 YP_003474473.1 CDS HMPREF0868_0124 NC_013895.2 1775217 1776281 R identified by match to protein family HMM PF02661; Fic family protein complement(1775217..1776281) Clostridiales genomosp. BVAB3 str. UPII9-5 8810861 YP_003933669.1 CDS HMPREF0868_0123 NC_013895.2 1776461 1776712 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(1776461..1776712) Clostridiales genomosp. BVAB3 str. UPII9-5 8811127 YP_003933670.1 CDS HMPREF0868_0122 NC_013895.2 1776956 1777249 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(1776956..1777249) Clostridiales genomosp. BVAB3 str. UPII9-5 8810407 YP_003933671.1 CDS HMPREF0868_0121 NC_013895.2 1777380 1777574 R an automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; hypothetical protein complement(1777380..1777574) Clostridiales genomosp. BVAB3 str. UPII9-5 8811310 YP_003474472.1 CDS HMPREF0868_0120 NC_013895.2 1777769 1778239 R identified by match to protein family HMM PF00583; GNAT family acetyltransferase complement(1777769..1778239) Clostridiales genomosp. BVAB3 str. UPII9-5 8810635 YP_003474471.1 CDS HMPREF0868_0119 NC_013895.2 1778699 1778995 R identified by match to protein family HMM PF04221; match to protein family HMM TIGR02384; putative toxin-antitoxin system antitoxin component ribbon-helix-helix domain-containing protein complement(1778699..1778995) Clostridiales genomosp. BVAB3 str. UPII9-5 8810639 YP_003474470.1 CDS HMPREF0868_0118 NC_013895.2 1779083 1780525 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(1779083..1780525) Clostridiales genomosp. BVAB3 str. UPII9-5 8810045 YP_003474469.1 CDS HMPREF0868_0117 NC_013895.2 1780940 1781758 D identified by match to protein family HMM PF01925; hypothetical protein 1780940..1781758 Clostridiales genomosp. BVAB3 str. UPII9-5 8810960 YP_003474468.1 CDS HMPREF0868_0116 NC_013895.2 1782644 1783654 R hypothetical protein complement(1782644..1783654) Clostridiales genomosp. BVAB3 str. UPII9-5 8810428 YP_003474467.1 CDS HMPREF0868_0115 NC_013895.2 1784358 1785800 R identified by match to protein family HMM PF04326; divergent AAA domain-containing protein complement(1784358..1785800) Clostridiales genomosp. BVAB3 str. UPII9-5 8810076 YP_003474466.1 CDS HMPREF0868_0114 NC_013895.2 1785823 1786080 R hypothetical protein complement(1785823..1786080) Clostridiales genomosp. BVAB3 str. UPII9-5 8810579 YP_003474465.1 CDS rumA NC_013895.2 1786195 1787571 R identified by match to protein family HMM PF01938; match to protein family HMM PF02475; match to protein family HMM PF05958; match to protein family HMM TIGR00479; 23S rRNA (uracil-5-)-methyltransferase RumA complement(1786195..1787571) Clostridiales genomosp. BVAB3 str. UPII9-5 8810274 YP_003474464.1 CDS HMPREF0868_0112 NC_013895.2 1787791 1789221 R identified by match to protein family HMM PF00860; match to protein family HMM PF00916; putative permease complement(1787791..1789221) Clostridiales genomosp. BVAB3 str. UPII9-5 8810758 YP_003474463.1 CDS HMPREF0868_0111 NC_013895.2 1789752 1790549 D hypothetical protein 1789752..1790549 Clostridiales genomosp. BVAB3 str. UPII9-5 8810420 YP_003474462.1 CDS HMPREF0868_0110 NC_013895.2 1790591 1790716 R hypothetical protein complement(1790591..1790716) Clostridiales genomosp. BVAB3 str. UPII9-5 8810930 YP_003474461.1 CDS HMPREF0868_0109 NC_013895.2 1790698 1792062 D identified by match to protein family HMM PF02386; match to protein family HMM TIGR00933; putative Ktr system potassium uptake protein B 1790698..1792062 Clostridiales genomosp. BVAB3 str. UPII9-5 8810773 YP_003474460.1 CDS HMPREF0868_0108 NC_013895.2 1792154 1792813 D identified by match to protein family HMM PF02254; putative Ktr system potassium uptake protein A 1792154..1792813 Clostridiales genomosp. BVAB3 str. UPII9-5 8810074 YP_003474459.1 CDS HMPREF0868_0107 NC_013895.2 1792888 1793067 R hypothetical protein complement(1792888..1793067) Clostridiales genomosp. BVAB3 str. UPII9-5 8811314 YP_003474458.1 CDS HMPREF0868_0106 NC_013895.2 1793021 1794151 D hypothetical protein 1793021..1794151 Clostridiales genomosp. BVAB3 str. UPII9-5 8809940 YP_003474457.1 CDS HMPREF0868_0105 NC_013895.2 1794293 1794841 R hypothetical protein complement(1794293..1794841) Clostridiales genomosp. BVAB3 str. UPII9-5 8811287 YP_003474456.1 CDS HMPREF0868_0104 NC_013895.2 1794838 1797219 R identified by match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525; copper-exporting ATPase complement(1794838..1797219) Clostridiales genomosp. BVAB3 str. UPII9-5 8810224 YP_003474455.1 CDS hflX NC_013895.2 1797241 1798452 R identified by match to protein family HMM PF01926; match to protein family HMM TIGR00231; match to protein family HMM TIGR03156; GTP-binding protein HflX complement(1797241..1798452) Clostridiales genomosp. BVAB3 str. UPII9-5 8810646 YP_003474454.1 CDS HMPREF0868_0102 NC_013895.2 1798439 1799194 R identified by match to protein family HMM PF01470; putative pyroglutamyl-peptidase I complement(1798439..1799194) Clostridiales genomosp. BVAB3 str. UPII9-5 8811315 YP_003474453.1 CDS HMPREF0868_0101 NC_013895.2 1799360 1801015 R identified by match to protein family HMM PF01966; match to protein family HMM TIGR01353; putative dGTPase complement(1799360..1801015) Clostridiales genomosp. BVAB3 str. UPII9-5 8810806 YP_003474452.1 CDS HMPREF0868_0100 NC_013895.2 1801162 1801893 D hypothetical protein 1801162..1801893 Clostridiales genomosp. BVAB3 str. UPII9-5 8810383 YP_003474451.1 CDS HMPREF0868_0099 NC_013895.2 1802141 1803343 R identified by match to protein family HMM PF00268; ribonucleoside-diphosphate reductase subunit beta complement(1802141..1803343) Clostridiales genomosp. BVAB3 str. UPII9-5 8811103 YP_003474450.1 CDS HMPREF0868_0098 NC_013895.2 1803340 1805874 R identified by match to protein family HMM PF00317; match to protein family HMM PF02867; match to protein family HMM PF03477; match to protein family HMM TIGR02506; ribonucleoside-diphosphate reductase subunit alpha complement(1803340..1805874) Clostridiales genomosp. BVAB3 str. UPII9-5 8810604 YP_003474449.1 CDS HMPREF0868_0097 NC_013895.2 1806040 1806156 R hypothetical protein complement(1806040..1806156) Clostridiales genomosp. BVAB3 str. UPII9-5 8810935 YP_003474448.1 CDS HMPREF0868_0096 NC_013895.2 1806477 1807109 D identified by match to protein family HMM PF02559; CarD-like protein 1806477..1807109 Clostridiales genomosp. BVAB3 str. UPII9-5 8810332 YP_003474447.1 CDS pepF_2 NC_013895.2 1807199 1809004 R identified by match to protein family HMM PF01432; match to protein family HMM PF08439; match to protein family HMM TIGR00181; oligoendopeptidase F complement(1807199..1809004) Clostridiales genomosp. BVAB3 str. UPII9-5 8810642 YP_003474446.1 CDS HMPREF0868_0094 NC_013895.2 1809123 1809701 D hypothetical protein 1809123..1809701 Clostridiales genomosp. BVAB3 str. UPII9-5 8811494 HMPREF0868_0062 tRNA HMPREF0868_0062 NC_013895.2 29447 29523 D tRNA-Val 29447..29523 Clostridiales genomosp. BVAB3 str. UPII9-5 8809950 HMPREF0868_1621 tRNA HMPREF0868_1621 NC_013895.2 126450 126541 D tRNA-Ser 126450..126541 Clostridiales genomosp. BVAB3 str. UPII9-5 8811539 HMPREF0868_1620 tRNA HMPREF0868_1620 NC_013895.2 126823 126911 D tRNA-Ser 126823..126911 Clostridiales genomosp. BVAB3 str. UPII9-5 8811031 HMPREF0868_1564 tRNA HMPREF0868_1564 NC_013895.2 185082 185157 D tRNA-Ala 185082..185157 Clostridiales genomosp. BVAB3 str. UPII9-5 8811306 HMPREF0868_1501 tRNA HMPREF0868_1501 NC_013895.2 235093 235168 D tRNA-Val 235093..235168 Clostridiales genomosp. BVAB3 str. UPII9-5 8811550 HMPREF0868_1500 tRNA HMPREF0868_1500 NC_013895.2 235174 235250 D tRNA-Asp 235174..235250 Clostridiales genomosp. BVAB3 str. UPII9-5 8811549 HMPREF0868_1499 tRNA HMPREF0868_1499 NC_013895.2 235282 235357 D tRNA-Phe 235282..235357 Clostridiales genomosp. BVAB3 str. UPII9-5 8810795 HMPREF0868_1475 tRNA HMPREF0868_1475 NC_013895.2 257172 257248 D tRNA-Ile 257172..257248 Clostridiales genomosp. BVAB3 str. UPII9-5 8811565 HMPREF0868_1472 tRNA HMPREF0868_1472 NC_013895.2 260563 260638 D tRNA-Asn 260563..260638 Clostridiales genomosp. BVAB3 str. UPII9-5 8810774 HMPREF0868_1404 tRNA HMPREF0868_1404 NC_013895.2 333663 333738 D tRNA-Thr 333663..333738 Clostridiales genomosp. BVAB3 str. UPII9-5 8810154 HMPREF0868_1369 tRNA HMPREF0868_1369 NC_013895.2 381411 381502 R tRNA-Ser complement(381411..381502) Clostridiales genomosp. BVAB3 str. UPII9-5 8811533 HMPREF0868_1368 tRNA HMPREF0868_1368 NC_013895.2 381551 381626 R tRNA-Thr complement(381551..381626) Clostridiales genomosp. BVAB3 str. UPII9-5 8810827 HMPREF0868_1311 tRNA HMPREF0868_1311 NC_013895.2 436257 436331 R tRNA-Glu complement(436257..436331) Clostridiales genomosp. BVAB3 str. UPII9-5 8809949 HMPREF0868_1285 tRNA HMPREF0868_1285 NC_013895.2 467018 467093 D tRNA-Ala 467018..467093 Clostridiales genomosp. BVAB3 str. UPII9-5 8811561 HMPREF0868_1269 tRNA HMPREF0868_1269 NC_013895.2 480580 480656 D tRNA-Met 480580..480656 Clostridiales genomosp. BVAB3 str. UPII9-5 8811528 HMPREF0868_1268 tRNA HMPREF0868_1268 NC_013895.2 480661 480735 D tRNA-Glu 480661..480735 Clostridiales genomosp. BVAB3 str. UPII9-5 8811523 HMPREF0868_1267 tRNA HMPREF0868_1267 NC_013895.2 480740 480814 D tRNA-Gly 480740..480814 Clostridiales genomosp. BVAB3 str. UPII9-5 8811515 HMPREF0868_1266 tRNA HMPREF0868_1266 NC_013895.2 480851 480925 D tRNA-Cys 480851..480925 Clostridiales genomosp. BVAB3 str. UPII9-5 8809998 HMPREF0868_1156 tRNA HMPREF0868_1156 NC_013895.2 596452 596536 R tRNA-Tyr complement(596452..596536) Clostridiales genomosp. BVAB3 str. UPII9-5 8811512 HMPREF0868_1155 tRNA HMPREF0868_1155 NC_013895.2 596568 596644 R tRNA-Met complement(596568..596644) Clostridiales genomosp. BVAB3 str. UPII9-5 8809986 HMPREF0868_1115 tRNA HMPREF0868_1115 NC_013895.2 641107 641182 D tRNA-Ala 641107..641182 Clostridiales genomosp. BVAB3 str. UPII9-5 8810521 HMPREF0868_1099 tRNA HMPREF0868_1099 NC_013895.2 654410 654485 R tRNA-Pro complement(654410..654485) Clostridiales genomosp. BVAB3 str. UPII9-5 8810808 HMPREF0868_1090 tRNA HMPREF0868_1090 NC_013895.2 665099 665185 D tRNA-Leu 665099..665185 Clostridiales genomosp. BVAB3 str. UPII9-5 8810971 HMPREF0868_1053 tRNA HMPREF0868_1053 NC_013895.2 705005 705090 R tRNA-Leu complement(705005..705090) Clostridiales genomosp. BVAB3 str. UPII9-5 8811259 HMPREF0868_1034 tRNA HMPREF0868_1034 NC_013895.2 725270 725356 D tRNA-Leu 725270..725356 Clostridiales genomosp. BVAB3 str. UPII9-5 8811542 HMPREF0868_1033 tRNA HMPREF0868_1033 NC_013895.2 725361 725436 D tRNA-Met 725361..725436 Clostridiales genomosp. BVAB3 str. UPII9-5 8810782 HMPREF0868_1031 tRNA HMPREF0868_1031 NC_013895.2 726517 726592 D tRNA-Pro 726517..726592 Clostridiales genomosp. BVAB3 str. UPII9-5 8811338 HMPREF0868_0995 tRNA HMPREF0868_0995 NC_013895.2 757060 757136 R tRNA-Val complement(757060..757136) Clostridiales genomosp. BVAB3 str. UPII9-5 8810634 HMPREF0868_0977 tRNA HMPREF0868_0977 NC_013895.2 778452 778528 R tRNA-Arg complement(778452..778528) Clostridiales genomosp. BVAB3 str. UPII9-5 8811513 HMPREF0868_0976 tRNA HMPREF0868_0976 NC_013895.2 778555 778628 R tRNA-Gly complement(778555..778628) Clostridiales genomosp. BVAB3 str. UPII9-5 8810415 HMPREF0868_0922 tRNA HMPREF0868_0922 NC_013895.2 843577 843663 D tRNA-Leu 843577..843663 Clostridiales genomosp. BVAB3 str. UPII9-5 8811240 HMPREF0868_0909 tRNA HMPREF0868_0909 NC_013895.2 853212 853288 D tRNA-His 853212..853288 Clostridiales genomosp. BVAB3 str. UPII9-5 8811548 HMPREF0868_0908 tRNA HMPREF0868_0908 NC_013895.2 853293 853367 D tRNA-Gln 853293..853367 Clostridiales genomosp. BVAB3 str. UPII9-5 8811518 HMPREF0868_0907 tRNA HMPREF0868_0907 NC_013895.2 853371 853446 D tRNA-Lys 853371..853446 Clostridiales genomosp. BVAB3 str. UPII9-5 8810859 HMPREF0868_0876 tRNA HMPREF0868_0876 NC_013895.2 893149 893225 R tRNA-Pro complement(893149..893225) Clostridiales genomosp. BVAB3 str. UPII9-5 8810446 HMPREF0868_0804 tRNA HMPREF0868_0804 NC_013895.2 982207 982282 R tRNA-Lys complement(982207..982282) Clostridiales genomosp. BVAB3 str. UPII9-5 8811473 HMPREF0868_0748 tRNA HMPREF0868_0748 NC_013895.2 1044724 1044800 D tRNA-Arg 1044724..1044800 Clostridiales genomosp. BVAB3 str. UPII9-5 8810355 HMPREF0868_0701 tRNA HMPREF0868_0701 NC_013895.2 1091566 1091639 D tRNA-Gly 1091566..1091639 Clostridiales genomosp. BVAB3 str. UPII9-5 8811030 HMPREF0868_0680 tRNA HMPREF0868_0680 NC_013895.2 1108452 1108527 D tRNA-Thr 1108452..1108527 Clostridiales genomosp. BVAB3 str. UPII9-5 8810702 HMPREF0868_0623 tRNA HMPREF0868_0623 NC_013895.2 1175617 1175691 D tRNA-Trp 1175617..1175691 Clostridiales genomosp. BVAB3 str. UPII9-5 8810748 HMPREF0868_0556 tRNA HMPREF0868_0556 NC_013895.2 1263220 1263311 D tRNA-Ser 1263220..1263311 Clostridiales genomosp. BVAB3 str. UPII9-5 8810535 HMPREF0868_0513 tRNA HMPREF0868_0513 NC_013895.2 1296350 1296426 R tRNA-Arg complement(1296350..1296426) Clostridiales genomosp. BVAB3 str. UPII9-5 8810887 HMPREF0868_0464 tRNA HMPREF0868_0464 NC_013895.2 1348653 1348735 R tRNA-Leu complement(1348653..1348735) Clostridiales genomosp. BVAB3 str. UPII9-5 8810344 HMPREF0868_0440 tRNA HMPREF0868_0440 NC_013895.2 1375114 1375187 D tRNA-Gln 1375114..1375187 Clostridiales genomosp. BVAB3 str. UPII9-5 8810601 HMPREF0868_0432 tRNA HMPREF0868_0432 NC_013895.2 1384986 1385060 D tRNA-Arg 1384986..1385060 Clostridiales genomosp. BVAB3 str. UPII9-5 8810401 HMPREF0868_1476 rRNA rrs_1 NC_013895.2 255538 257054 D 16S ribosomal RNA 255538..257054 Clostridiales genomosp. BVAB3 str. UPII9-5 8811532 HMPREF0868_1474 rRNA rrl_1 NC_013895.2 257453 260349 D 23S ribosomal RNA 257453..260349 Clostridiales genomosp. BVAB3 str. UPII9-5 8811560 HMPREF0868_1473 rRNA rrf_1 NC_013895.2 260440 260556 D 5S ribosomal RNA 260440..260556 Clostridiales genomosp. BVAB3 str. UPII9-5 8811525 HMPREF0868_1286 rRNA rrs_2 NC_013895.2 465385 466901 D 16S ribosomal RNA 465385..466901 Clostridiales genomosp. BVAB3 str. UPII9-5 8811527 HMPREF0868_1284 rRNA rrl_2 NC_013895.2 467288 470184 D 23S ribosomal RNA 467288..470184 Clostridiales genomosp. BVAB3 str. UPII9-5 8811562 HMPREF0868_1283 rRNA rrf_2 NC_013895.2 470275 470391 D 5S ribosomal RNA 470275..470391 Clostridiales genomosp. BVAB3 str. UPII9-5 8810743