-- dump date   	20111121_011207
-- class       	Genbank::misc_feature
-- table       	misc_feature_note
-- id	note
471473000001	PS00169 Delta-aminolevulinic acid dehydratase active site.
471473000002	PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site.
471473000003	1 probable transmembrane helix predicted for CTL0006 by TMHMM2.0 at aa 13-30
471473000004	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000005	12 probable transmembrane helices predicted for CTL0009 by TMHMM2.0 at aa 13-35, 48-70, 77-99,105-127,140-162, 172-194, 227-249, 264-286, 291-313,318-340,353-375 and 385-404
471473000006	1 probable transmembrane helix predicted for CTL0010 by TMHMM2.0 at aa 182-204
471473000007	PS00396 Prokaryotic DNA topoisomerase I active site.
471473000008	PS01136 Uncharacterized protein family UPF0034 signature.
471473000009	2 probable transmembrane helices predicted for CTL0013 by TMHMM2.0 at aa 4-26 and 64-86
471473000010	1 probable transmembrane helix predicted for CTL0015 by TMHMM2.0 at aa 5-27
471473000011	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000012	PS00321 recA signature.
471473000013	PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
471473000014	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000015	PS00211 ABC transporters family signature.
471473000016	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000017	1 probable transmembrane helix predicted for CTL0023 by TMHMM2.0 at aa 5-27
471473000018	PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
471473000019	HMMPfam hit to PF05201, Glutamyl-tRNAGlu reductase,N-terminal domai, score 3.9e-54
471473000020	HMMPfam hit to PF05932, Tir chaperone protein (CesT), score 8.1e-35
471473000021	HMMPfam hit to PF00498, FHA domain, score 6.6e-11
471473000022	HMMPfam hit to PF00498, FHA domain, score 9e-11
471473000023	1 probable transmembrane helix predicted for CTL0033 by TMHMM2.0 at aa 530-552
471473000024	HMMPfam hit to PF04972, Putative phospholipid-binding domain, score 3.3e-10
471473000025	HMMPfam hit to PF07719, Tetratricopeptide repeat,score 0.0037
471473000026	HMMPfam hit to PF02874, ATP synthase alpha/beta family, beta-ba, score 9.6e-07
471473000027	HMMPfam hit to PF00006, ATP synthase alpha/beta family, nucleot, score 9.1e-125
471473000028	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000029	PS00152 ATP synthase alpha and beta subunits signature.
471473000030	HMMPfam hit to PF01052, Surface presentation of antigens (SPOA) prot, score 0.00025
471473000031	HMMPfam hit to PF00069, Protein kinase domain,score 6.6e-29
471473000032	PS00108 Serine/Threonine protein kinases active-site signature.
471473000033	HMMPfam hit to PF03958, Bacterial type II/III secretion system sho, score 2.5e-09
471473000034	PS00591 Glycosyl hydrolases family 10 active site.
471473000035	HMMPfam hit to PF03958, Bacterial type II/III secretion system sho, score 2.8e-09
471473000036	HMMPfam hit to PF03958, Bacterial type II/III secretion system sho, score 3.2e-09
471473000037	HMMPfam hit to PF00263, Bacterial type II and III secretion system, score 2.8e-72
471473000038	HMMPfam hit to PF00217, ATP:guanido phosphotransferase, C-term, score 9.2e-05
471473000039	HMMPfam hit to PF02151, UvrB/uvrC motif, score 4.9e-09
471473000040	HMMPfam hit to PF01765, Ribosome recycling factor,score 4.1e-85
471473000041	HMMPfam hit to PF00696, Amino acid kinase family,score 2.3e-51
471473000042	HMMPfam hit to PF00889, Elongation factor TS, score 9.6e-105
471473000043	PS01127 Elongation factor Ts signature 2.
471473000044	HMMPfam hit to PF00627, UBA/TS-N domain, score 9.2e-09
471473000045	PS01126 Elongation factor Ts signature 1.
471473000046	HMMPfam hit to PF00318, Ribosomal protein S2, score 1.2e-84
471473000047	PS00963 Ribosomal protein S2 signature 2.
471473000048	PS00962 Ribosomal protein S2 signature 1.
471473000049	HMMPfam hit to PF01308, Chlamydia major outer membrane protein, score 8.2e-268
471473000050	1 probable transmembrane helix predicted for CTL0051 by TMHMM2.0 at aa 17-39
471473000051	HMMPfam hit to PF03717, Penicillin-binding Protein dimerisatio, score 3e-52
471473000052	HMMPfam hit to PF00905, Penicillin binding protein transpeptid, score 4.6e-06
471473000053	HMMPfam hit to PF07719, Tetratricopeptide repeat,score 0.0015
471473000054	HMMPfam hit to PF00515, Tetratricopeptide repeat,score 7.9e-07
471473000055	HMMPfam hit to PF00515, Tetratricopeptide repeat,score 0.059
471473000056	HMMPfam hit to PF07719, Tetratricopeptide repeat,score 0.00011
471473000057	HMMPfam hit to PF00515, Tetratricopeptide repeat,score 3e-06
471473000058	HMMPfam hit to PF00515, Tetratricopeptide repeat,score 2.5e-05
471473000059	HMMPfam hit to PF01458, Uncharacterized protein family (UPF0051), score 6.4e-117
471473000060	HMMPfam hit to PF00005, ABC transporter, score 6.5e-25
471473000061	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000062	HMMPfam hit to PF01458, Uncharacterized protein family (UPF0051), score 1.3e-10
471473000063	HMMPfam hit to PF00266, Aminotransferase class-V,score 3.2e-197
471473000064	HMMPfam hit to PF01212, Beta-eliminating lyase,score 0.0031
471473000065	PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site.
471473000066	HMMPfam hit to PF02195, ParB-like nuclease domain,score 9.8e-36
471473000067	HMMPfam hit to PF00005, ABC transporter, score 6.5e-46
471473000068	PS00211 ABC transporters family signature.
471473000069	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000070	HMMPfam hit to PF08352, Oligopeptide/dipeptide transporter, C-termi, score 5.8e-21
471473000071	HMMPfam hit to PF00005, ABC transporter, score 2.2e-50
471473000072	PS00211 ABC transporters family signature.
471473000073	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000074	HMMPfam hit to PF01865, Protein of unknown function DUF47, score 3.3e-111
471473000075	10 probable transmembrane helices predicted for CTL0061 by TMHMM2.0 at aa 2-21, 36-58, 101-123,138-160,181-203, 208-230, 260-282, 310-332, 362-384 and 399-421
471473000076	HMMPfam hit to PF01384, Phosphate transporter family, score 8.1e-191
471473000077	PS00211 ABC transporters family signature.
471473000078	HMMPfam hit to PF00162, Phosphoglycerate kinase,score 8.8e-182
471473000079	PS00111 Phosphoglycerate kinase signature.
471473000080	HMMPfam hit to PF00730, HhH-GPD superfamily base excision DNA repair, score 8.2e-22
471473000081	HMMPfam hit to PF00633, Helix-hairpin-helix motif,score 2.1e-05
471473000082	HMMPfam hit to PF01926, GTPase of unknown function,score 3e-41
471473000083	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000084	HMMPfam hit to PF02666, Phosphatidylserine decarboxylase, score 1e-113
471473000085	1 probable transmembrane helix predicted for CTL0069 by TMHMM2.0 at aa 2-19
471473000086	PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
471473000087	HMMPfam hit to PF07719, Tetratricopeptide repeat,score 0.00073
471473000088	HMMPfam hit to PF07517, SecA DEAD-like domain,score 6.2e-162
471473000089	HMMPfam hit to PF01043, SecA preprotein cross-linking domain, score 4.5e-16
471473000090	PS01312 Protein secA signatures.
471473000091	HMMPfam hit to PF07516, SecA Wing and Scaffold domain, score 8.5e-42
471473000092	HMMPfam hit to PF01926, GTPase of unknown function,score 8.5e-45
471473000093	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000094	HMMPfam hit to PF01926, GTPase of unknown function,score 4.3e-41
471473000095	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000096	HMMPfam hit to PF01743, Poly A polymerase family,score 3.1e-78
471473000097	HMMPfam hit to PF00004, ATPase family associated with various cell, score 1.3e-05
471473000098	HMMPfam hit to PF07724, ATPase family associated with various cell, score 1e-79
471473000099	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000100	HMMPfam hit to PF06689, ClpX C4-type zinc finger,score 1.6e-21
471473000101	HMMPfam hit to PF00574, Clp protease, score 1.7e-117
471473000102	PS00382 Endopeptidase Clp histidine active site.
471473000103	PS00381 Endopeptidase Clp serine active site.
471473000104	PS00225 Crystallins beta and gamma 'Greek key' motif signature.
471473000105	HMMPfam hit to PF05698, Bacterial trigger factor protein (TF) C-ter, score 6.1e-35
471473000106	HMMPfam hit to PF05697, Bacterial trigger factor protein (TF), score 1e-38
471473000107	HMMPfam hit to PF04434, SWIM zinc finger, score 3.8e-07
471473000108	HMMPfam hit to PF04851, Type III restriction enzyme,res subunit, score 1.7e-05
471473000109	HMMPfam hit to PF00176, SNF2 family N-terminal domain, score 5.5e-87
471473000110	HMMPfam hit to PF00271, Helicase conserved C-terminal domain, score 1.2e-26
471473000111	HMMPfam hit to PF06723, MreB/Mbl protein, score 1.1e-229
471473000112	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000113	HMMPfam hit to PF02491, Cell division protein FtsA,score 0.00014
471473000114	HMMPfam hit to PF00821, Phosphoenolpyruvate carboxykinase, score 0
471473000115	PS00505 Phosphoenolpyruvate carboxykinase (GTP) signature.
471473000116	PS00012 Phosphopantetheine attachment site.
471473000117	HMMPfam hit to PF04518, Protein of unknown function,DUF582, score 8.8e-200
471473000118	HMMPfam hit to PF04518, Protein of unknown function,DUF582, score 2.5e-192
471473000119	HMMPfam hit to PF07479, NAD-dependent glycerol-3-phosphate deh, score 5e-81
471473000120	HMMPfam hit to PF01210, NAD-dependent glycerol-3-phosphate deh, score 1.1e-65
471473000121	HMMPfam hit to PF01704, UTP--glucose-1-phosphate uridylyltransferase, score 8.9e-08
471473000122	HMMPfam hit to PF00006, ATP synthase alpha/beta family, nucleot, score 5.2e-89
471473000123	PS00152 ATP synthase alpha and beta subunits signature.
471473000124	HMMPfam hit to PF02874, ATP synthase alpha/beta family, beta-ba, score 0.00025
471473000125	1 probable transmembrane helix predicted for CTL0088 by TMHMM2.0 at aa 247-269
471473000126	HMMPfam hit to PF01106, NifU-like domain, score 9.3e-05
471473000127	HMMPfam hit to PF01592, NifU-like N terminal domain,score 1.3e-06
471473000128	HMMPfam hit to PF00266, Aminotransferase class-V,score 4.5e-07
471473000129	HMMPfam hit to PF00300, Phosphoglycerate mutase family, score 1.4e-38
471473000130	PS00175 Phosphoglycerate mutase family phosphohistidine signature.
471473000131	PS00430 TonB-dependent receptor proteins signature 1.
471473000132	HMMPfam hit to PF01479, S4 domain, score 2.8e-09
471473000133	HMMPfam hit to PF00849, RNA pseudouridylate synthase, score 1e-30
471473000134	PS01149 Rsu family of pseudouridine synthase signature.
471473000135	HMMPfam hit to PF03099, Biotin/lipoate A/B protein ligase famil, score 2.1e-23
471473000136	HMMPfam hit to PF01098, Cell cycle protein, score 2.2e-48
471473000137	8 probable transmembrane helices predicted for CTL0095 by TMHMM2.0 at aa 12-29, 77-99, 144-161,166-185,192-214, 279-301, 314-336 and 346-368
471473000138	PS00012 Phosphopantetheine attachment site.
471473000139	PS00428 Cell cycle proteins ftsW / rodA / spoVE signature.
471473000140	7 probable transmembrane helices predicted for CTL0096 by TMHMM2.0 at aa 46-65, 67-86, 106-128,267-289,304-326, 608-627 and 631-653
471473000141	HMMPfam hit to PF00702, haloacid dehalogenase-like hydrolase, score 3.1e-33
471473000142	PS01229 Hypothetical cof family signature 2.
471473000143	PS00154 E1-E2 ATPases phosphorylation site.
471473000144	HMMPfam hit to PF00122, E1-E2 ATPase, score 1.6e-50
471473000145	3 probable transmembrane helices predicted for CTL0097 by TMHMM2.0 at aa 63-85, 181-203 and 223-245
471473000146	HMMPfam hit to PF00587, tRNA synthetase class II core domain (G,, score 2.4e-62
471473000147	PS00179 Aminoacyl-transfer RNA synthetases class-II signature 1.
471473000148	HMMPfam hit to PF02403, Seryl-tRNA synthetase N-terminal domain, score 7.6e-33
471473000149	HMMPfam hit to PF00383, Cytidine and deoxycytidylate deaminas, score 2.9e-40
471473000150	PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature.
471473000151	HMMPfam hit to PF01872, RibD C-terminal domain,score 4.4e-95
471473000152	PS00430 TonB-dependent receptor proteins signature 1.
471473000153	HMMPfam hit to PF00926, 3,4-dihydroxy-2-butanone 4-phosphate, score 1.6e-97
471473000154	HMMPfam hit to PF00925, GTP cyclohydrolase II,score 6.4e-98
471473000155	HMMPfam hit to PF00885,6,7-dimethyl-8-ribityllumazine synthase, score 3.4e-40
471473000156	PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
471473000157	11 probable transmembrane helices predicted for CTL0104 by TMHMM2.0 at aa 10-32, 67-89, 94-116,146-168,183-205, 212-229, 239-261, 300-322, 342-364,385-407 and 412-434
471473000158	HMMPfam hit to PF01235, Sodium:alanine symporter family, score 1.2e-18
471473000159	HMMPfam hit to PF01161,Phosphatidylethanolamine-binding protein, score 1.6e-58
471473000160	HMMPfam hit to PF00856, SET domain, score 1.7e-35
471473000161	HMMPfam hit to PF00753, Metallo-beta-lactamase superfamily, score 9.8e-15
471473000162	HMMPfam hit to PF01580, FtsK/SpoIIIE family, score 1.5e-61
471473000163	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000164	5 probable transmembrane helices predicted for CTL0108 by TMHMM2.0 at aa 17-39, 49-71, 91-113, 128-150 and 159-181
471473000165	HMMPfam hit to PF00175, Oxidoreductase NAD-binding domain, score 0.00069
471473000166	HMMPfam hit to PF00111, 2Fe-2S iron-sulfur cluster binding doma, score 7.4e-12
471473000167	1 probable transmembrane helix predicted for CTL0109 by TMHMM2.0 at aa 7-29
471473000168	HMMPfam hit to PF02699, Preprotein translocase subunit, score 4e-40
471473000169	2 probable transmembrane helices predicted for CTL0110 by TMHMM2.0 at aa 2-21 and 31-50
471473000170	PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
471473000171	HMMPfam hit to PF05958, tRNA (Uracil-5-)-methyltransferase, score 2.8e-08
471473000172	PS01231 RNA methyltransferase trmA family signature 2.
471473000173	PS01230 RNA methyltransferase trmA family signature 1.
471473000174	HMMPfam hit to PF07432, Histone H1-like protein Hc1,score 4.7e-78
471473000175	HMMPfam hit to PF01593, Flavin containing amine oxidoreductase, score 0.00038
471473000176	HMMPfam hit to PF01266, FAD dependent oxidoreductase, score 0.0012
471473000177	HMMPfam hit to PF06969, HemN C-terminal region,score 1.9e-46
471473000178	HMMPfam hit to PF04055, Radical SAM superfamily,score 2e-21
471473000179	HMMPfam hit to PF01208, Uroporphyrinogen decarboxylase (URO-D), score 1.6e-46
471473000180	HMMPfam hit to PF03461, TRCF domain, score 4.3e-43
471473000181	HMMPfam hit to PF00271, Helicase conserved C-terminal domain, score 4.7e-17
471473000182	HMMPfam hit to PF00270, DEAD/DEAH box helicase,score 1e-32
471473000183	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000184	HMMPfam hit to PF02559, CarD-like/TRCF domain,score 3e-35
471473000185	HMMPfam hit to PF02272, DHHA1 domain, score 1.4e-12
471473000186	HMMPfam hit to PF07973, Threonyl and Alanyl tRNA synthetase seco, score 6.5e-17
471473000187	HMMPfam hit to PF01411, tRNA synthetases class II (A), score 0
471473000188	PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.
471473000189	HMMPfam hit to PF00456, Transketolase, thiamine diphosphate b, score 1.3e-154
471473000190	HMMPfam hit to PF02779, Transketolase, pyridine binding domai, score 1.9e-64
471473000191	PS00213 Lipocalin signature.
471473000192	HMMPfam hit to PF02780, Transketolase, C-terminal domain, score 0.0009
471473000193	HMMPfam hit to PF01048, Phosphorylase family, score 7.4e-08
471473000194	HMMPfam hit to PF08207, Elongation factor P (EF-P) KOW-like domain, score 1.2e-18
471473000195	HMMPfam hit to PF01132, Elongation factor P (EF-P) OB domain, score 3.8e-05
471473000196	PS01275 Elongation factor P signature.
471473000197	HMMPfam hit to PF00149, Calcineurin-like phosphoesterase, score 7.8e-17
471473000198	HMMPfam hit to PF00118, TCP-1/cpn60 chaperonin family, score 1.5e-21
471473000199	HMMPfam hit to PF01225, Mur ligase family,catalytic domain, score 5.5e-16
471473000200	HMMPfam hit to PF08245, Mur ligase middle domain,score 8.6e-17
471473000201	HMMPfam hit to PF02875, Mur ligase family,glutamate ligase doma, score 6.9e-09
471473000202	10 probable transmembrane helices predicted for CTL0126 by TMHMM2.0 at aa 10-29, 54-76, 80-99,119-137,157-179, 184-206, 210-232, 239-261, 265-287 and 313-335
471473000203	HMMPfam hit to PF00953, Glycosyl transferase family,score 3.2e-40
471473000204	HMMPfam hit to PF08245, Mur ligase middle domain,score 3e-23
471473000205	HMMPfam hit to PF02875, Mur ligase family,glutamate ligase doma, score 1.2e-12
471473000206	1 probable transmembrane helix predicted for CTL0128 by TMHMM2.0 at aa 7-25
471473000207	HMMPfam hit to PF01476, LysM domain, score 1e-16
471473000208	HMMPfam hit to PF01476, LysM domain, score 3.2e-13
471473000209	HMMPfam hit to PF01098, Cell cycle protein, score 8e-79
471473000210	9 probable transmembrane helices predicted for CTL0129 by TMHMM2.0 at aa 4-21, 41-63, 73-92,137-154,159-176, 181-203, 267-289, 296-318 and 333-355
471473000211	HMMPfam hit to PF03033, Glycosyltransferase family,score 2.3e-42
471473000212	1 probable transmembrane helix predicted for CTL0130 by TMHMM2.0 at aa 7-29
471473000213	HMMPfam hit to PF04101, Glycosyltransferase family,score 4.3e-54
471473000214	1 probable transmembrane helix predicted for CTL0131 by TMHMM2.0 at aa 5-24
471473000215	HMMPfam hit to PF01225, Mur ligase family,catalytic domain, score 7.5e-34
471473000216	HMMPfam hit to PF08245, Mur ligase middle domain,score 5.8e-15
471473000217	HMMPfam hit to PF02875, Mur ligase family,glutamate ligase d, score 3.6e-26
471473000218	HMMPfam hit to PF01820, D-ala D-ala ligase N-terminus, score 1.3e-61
471473000219	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000220	PS00843 D-alanine--D-alanine ligase signature 1.
471473000221	HMMPfam hit to PF07478, D-ala D-ala ligase C-terminus, score 1.3e-113
471473000222	HMMPfam hit to PF02222, ATP-grasp domain, score 0.0014
471473000223	PS00079 Multicopper oxidases signature 1.
471473000224	1 probable transmembrane helix predicted for CTL0133 by TMHMM2.0 at aa 26-48
471473000225	HMMPfam hit to PF01740, STAS domain, score 7.2e-28
471473000226	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000227	HMMPfam hit to PF01715, IPP transferase, score 2.7e-72
471473000228	HMMPfam hit to PF04055, Radical SAM superfamily,score 7.7e-20
471473000229	HMMPfam hit to PF02410, Domain of unknown function DUF143, score 6.6e-55
471473000230	HMMPfam hit to PF00109, Beta-ketoacyl synthase,N-terminal do, score 8.7e-87
471473000231	PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
471473000232	PS00205 Transferrins signature 1.
471473000233	PS00606 Beta-ketoacyl synthases active site.
471473000234	HMMPfam hit to PF02801, Beta-ketoacyl synthase,C-terminal do, score 2.7e-64
471473000235	HMMPfam hit to PF00293, NUDIX domain, score 6.9e-25
471473000236	PS00893 mutT domain signature.
471473000237	HMMPfam hit to PF00719, Inorganic pyrophosphatase,score 5.8e-16
471473000238	PS00387 Inorganic pyrophosphatase signature.
471473000239	HMMPfam hit to PF02812, Glu/Leu/Phe/Val dehydrogenase, dimeri, score 5.1e-18
471473000240	PS01109 Ribosomal protein L10 signature.
471473000241	HMMPfam hit to PF00208,Glutamate/Leucine/Phenylalanine/Valin, score 3e-23
471473000242	HMMPfam hit to PF00459, Inositol monophosphatase family, score 2.1e-66
471473000243	HMMPfam hit to PF01553, Acyltransferase, score 0.00014
471473000244	HMMPfam hit to PF00501, AMP-binding enzyme, score 1.3e-87
471473000245	1 probable transmembrane helix predicted for CTL0145 by TMHMM2.0 at aa 69-91
471473000246	HMMPfam hit to PF00155, Aminotransferase class I and II, score 1.3e-15
471473000247	PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site.
471473000248	HMMPfam hit to PF00271, Helicase conserved C-terminal domain, score 0.0083
471473000249	HMMPfam hit to PF00270, DEAD/DEAH box helicase,score 5.1e-08
471473000250	HMMPfam hit to PF04851, Type III restriction enzyme,res subunit, score 1e-07
471473000251	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000252	PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
471473000253	1 probable transmembrane helix predicted for CTL0149 by TMHMM2.0 at aa 4-23
471473000254	HMMPfam hit to PF01336, OB-fold nucleic acid binding domain, score 1.3e-12
471473000255	HMMPfam hit to PF00152, tRNA synthetases class II (D, K and N), score 4.5e-128
471473000256	PS00179 Aminoacyl-transfer RNA synthetases class-II signature 1.
471473000257	PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.
471473000258	HMMPfam hit to PF01406, tRNA synthetases class I (C) catalytic d, score 1.7e-135
471473000259	HMMPfam hit to PF00825, Ribonuclease P, score 3.3e-14
471473000260	PS00648 Bacterial ribonuclease P protein component signature.
471473000261	HMMPfam hit to PF00253, Ribosomal protein S14p/S29e,score 7.6e-23
471473000262	PS00527 Ribosomal protein S14 signature.
471473000263	2 probable transmembrane helices predicted for CTL0156 by TMHMM2.0 at aa 5-24 and 31-53
471473000264	PS00636 Nt-dnaJ domain signature.
471473000265	3 probable transmembrane helices predicted for CTL0157 by TMHMM2.0 at aa 12-29, 33-50 and 57-79
471473000266	HMMPfam hit to PF03780, Protein of unknown function (DUF322), score 6.5e-43
471473000267	HMMPfam hit to PF08459, UvrC Helix-hairpin-helix N-terminal, score 7.1e-73
471473000268	HMMPfam hit to PF01541, GIY-YIG catalytic domain,score 1.2e-22
471473000269	HMMPfam hit to PF00488, MutS domain V, score 5.9e-161
471473000270	PS00486 DNA mismatch repair proteins mutS family signature.
471473000271	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000272	HMMPfam hit to PF05192, MutS domain III, score 4.7e-74
471473000273	HMMPfam hit to PF05190, MutS family domain IV,score 9.7e-36
471473000274	HMMPfam hit to PF05188, MutS domain II, score 1.7e-38
471473000275	HMMPfam hit to PF01624, MutS domain I, score 1.9e-56
471473000276	The sequence has been checked and is believed to be correct.conserved hypothetical protein (pseudogene)
471473000277	HMMPfam hit to PF01807, CHC2 zinc finger, score 3.8e-62
471473000278	HMMPfam hit to PF08275, DNA primase catalytic core,N-terminal domai, score 5.8e-51
471473000279	HMMPfam hit to PF01751, Toprim domain, score 7.4e-17
471473000280	1 probable transmembrane helix predicted for CTL0163 by TMHMM2.0 at aa 7-26
471473000281	HMMPfam hit to PF05746, DALR anticodon binding domain, score 0.0021
471473000282	HMMPfam hit to PF02092, Glycyl-tRNA synthetase beta subunit, score 0
471473000283	HMMPfam hit to PF02091, Glycyl-tRNA synthetase alpha subunit, score 2.3e-235
471473000284	PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.
471473000285	5 probable transmembrane helices predicted for CTL0166 by TMHMM2.0 at aa 5-24, 29-51, 82-104, 134-156 and 163-185
471473000286	HMMPfam hit to PF01066, CDP-alcohol phosphatidyltransferase, score 1.4e-32
471473000287	PS00379 CDP-alcohol phosphatidyltransferases signature.
471473000288	HMMPfam hit to PF00534, Glycosyl transferases group,score 0.00047
471473000289	HMMPfam hit to PF08323, Starch synthase catalytic domain, score 1.5e-82
471473000290	HMMPfam hit to PF01386, Ribosomal L25p family,score 6.7e-09
471473000291	HMMPfam hit to PF01195, Peptidyl-tRNA hydrolase,score 5.9e-48
471473000292	PS01195 Peptidyl-tRNA hydrolase signature 1.
471473000293	PS01196 Peptidyl-tRNA hydrolase signature 2.
471473000294	HMMPfam hit to PF01250, Ribosomal protein S6, score 4.7e-17
471473000295	HMMPfam hit to PF01084, Ribosomal protein S18,score 2.1e-32
471473000296	PS00057 Ribosomal protein S18 signature.
471473000297	HMMPfam hit to PF01281, Ribosomal protein L9,N-terminal domai, score 4.3e-15
471473000298	HMMPfam hit to PF00288, GHMP kinases N terminal domain, score 2.6e-14
471473000299	HMMPfam hit to PF08544, GHMP kinases C terminal,score 3.3e-05
471473000300	HMMPfam hit to PF07399, Protein of unknown function (DUF1504), score 0
471473000301	11 probable transmembrane helices predicted for CTL0174 by TMHMM2.0 at aa 10-32, 61-83, 98-116,136-153,180-202, 223-242, 267-298, 311-330, 345-367,379-401 and 416-438
471473000302	HMMPfam hit to PF05193, Peptidase M16 inactive domain, score 1.2e-18
471473000303	HMMPfam hit to PF05193, Peptidase M16 inactive domain, score 1.6e-25
471473000304	HMMPfam hit to PF00675, Insulinase (Peptidase family M16), score 5.9e-26
471473000305	PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
471473000306	HMMPfam hit to PF01553, Acyltransferase, score 1.2e-38
471473000307	HMMPfam hit to PF01783, Ribosomal L32p protein family, score 2.4e-23
471473000308	PS00197 2Fe-2S ferredoxins, iron-sulfur binding region signature.
471473000309	HMMPfam hit to PF02504, Fatty acid synthesis protein, score 8.7e-176
471473000310	PS00430 TonB-dependent receptor proteins signature 1.
471473000311	PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
471473000312	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 8.5
471473000313	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 12
471473000314	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 1.9
471473000315	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 5.7
471473000316	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.08
471473000317	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 6.2
471473000318	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 33
471473000319	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 11
471473000320	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 4.2
471473000321	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 2
471473000322	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 5.7
471473000323	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.79
471473000324	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 9.8
471473000325	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.2
471473000326	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.0034
471473000327	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 2.8
471473000328	HMMPfam hit to PF07548, Chlamydia polymorphic membrane protei, score 1.2e-55
471473000329	HMMPfam hit to PF03797, Autotransporter beta-domain,score 1.2e-39
471473000330	HMMPfam hit to PF04156, IncA protein, score 5.2e-43
471473000331	2 probable transmembrane helices predicted for CTL0184 by TMHMM2.0 at aa 40-62 and 72-94
471473000332	1 probable transmembrane helix predicted for CTL0185 by TMHMM2.0 at aa 47-69
471473000333	1 probable transmembrane helix predicted for CTL0186 by TMHMM2.0 at aa 10-32
471473000334	HMMPfam hit to PF02878,Phosphoglucomutase/phosphomannomutase, al, score 2.9e-63
471473000335	PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature.
471473000336	HMMPfam hit to PF02879,Phosphoglucomutase/phosphomannomutase, al, score 8.1e-35
471473000337	HMMPfam hit to PF02880,Phosphoglucomutase/phosphomannomutase, al, score 1.3e-24
471473000338	HMMPfam hit to PF00408,Phosphoglucomutase/phosphomannomutase, C-, score 8.3e-05
471473000339	HMMPfam hit to PF00310, Glutamine amidotransferases class-II, score 2.1e-33
471473000340	PS00211 ABC transporters family signature.
471473000341	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000342	HMMPfam hit to PF01380, SIS domain, score 2.7e-30
471473000343	HMMPfam hit to PF01380, SIS domain, score 1.1e-14
471473000344	HMMPfam hit to PF03222, Tryptophan/tyrosine permease family, score 5.6e-219
471473000345	11 probable transmembrane helices predicted for CTL0189 by TMHMM2.0 at aa 7-29, 39-61, 82-101,121-138,151-170, 185-207, 219-241, 268-290, 311-330,340-357 and 370-392
471473000346	HMMPfam hit to PF03222, Tryptophan/tyrosine permease family, score 4.1e-210
471473000347	11 probable transmembrane helices predicted for CTL0190 by TMHMM2.0 at aa 7-29, 39-61, 82-104,124-146,153-175, 190-209, 221-243, 272-294, 311-328,338-357 and 378-396
471473000348	motif repeated in this and the adjacent CDS gene product
471473000349	motif repeated in this and the adjacent CDS gene product
471473000350	HMMPfam hit to PF01027, Uncharacterised protein family UPF0005, score 2.4e-06
471473000351	7 probable transmembrane helices predicted for CTL0191 by TMHMM2.0 at aa 21-43, 48-67, 74-96,106-128,141-163, 167-186 and 206-228
471473000352	HMMPfam hit to PF00448, SRP54-type protein, GTPase domain, score 1.2e-109
471473000353	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000354	HMMPfam hit to PF08442, ATP-grasp domain, score 1.9e-82
471473000355	HMMPfam hit to PF01071, Phosphoribosylglycinamide synthetase, ATP, score 0.0025
471473000356	HMMPfam hit to PF00549, CoA-ligase, score 5.2e-41
471473000357	2 probable transmembrane helices predicted for CTL0193 by TMHMM2.0 at aa 248-270 and 313-335
471473000358	PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3.
471473000359	HMMPfam hit to PF02629, CoA binding domain, score 9.2e-44
471473000360	HMMPfam hit to PF00549, CoA-ligase, score 2.4e-57
471473000361	PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1.
471473000362	PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site.
471473000363	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000364	HMMPfam hit to PF00089, Trypsin, score 2e-18
471473000365	HMMPfam hit to PF00595, PDZ domain (Also known as DHR or GLGF), score 1.5e-12
471473000366	HMMPfam hit to PF00595, PDZ domain (Also known as DHR or GLGF), score 0.0014
471473000367	HMMPfam hit to PF00675, Insulinase (Peptidase family M16), score 0.019
471473000368	HMMPfam hit to PF05193, Peptidase M16 inactive domain, score 1e-27
471473000369	HMMPfam hit to PF08367, Peptidase M16C associated,score 4e-118
471473000370	HMMPfam hit to PF05193, Peptidase M16 inactive domain, score 2.1e-24
471473000371	HMMPfam hit to PF02646, RmuC family, score 6.2e-140
471473000372	1 probable transmembrane helix predicted for CTL0197 by TMHMM2.0 at aa 13-35
471473000373	7 probable transmembrane helices predicted for CTL0198 by TMHMM2.0 at aa 15-37, 79-101, 111-133,145-167,182-204, 211-230 and 235-257
471473000374	HMMPfam hit to PF01066, CDP-alcohol phosphatidyltransferase, score 4.7e-22
471473000375	PS00379 CDP-alcohol phosphatidyltransferases signature.
471473000376	HMMPfam hit to PF03477, ATP cone domain, score 7.1e-32
471473000377	HMMPfam hit to PF03477, ATP cone domain, score 1.6e-33
471473000378	HMMPfam hit to PF03477, ATP cone domain, score 2e-08
471473000379	HMMPfam hit to PF00317, Ribonucleotide reductase,all-alpha d, score 4.4e-30
471473000380	PS00185 Isopenicillin N synthetase signature 1.
471473000381	HMMPfam hit to PF02867, Ribonucleotide reductase,barrel doma, score 1.1e-183
471473000382	HMMPfam hit to PF00268, Ribonucleotide reductase,small chain, score 7e-35
471473000383	1 probable transmembrane helix predicted for CTL0200 by TMHMM2.0 at aa 185-207
471473000384	HMMPfam hit to PF02390, Putative methyltransferase,score 2.2e-81
471473000385	HMMPfam hit to PF06962, Putative rRNA methylase,score 3.3e-75
471473000386	HMMPfam hit to PF02873,UDP-N-acetylenolpyruvoylglucosamine red, score 3.4e-58
471473000387	HMMPfam hit to PF01565, FAD binding domain, score 5.4e-13
471473000388	HMMPfam hit to PF01029, NusB family, score 3e-39
471473000389	HMMPfam hit to PF05198, Translation initiation factor IF-3, N-termin, score 5.2e-48
471473000390	PS00938 Initiation factor 3 signature.
471473000391	HMMPfam hit to PF00707, Translation initiation factor IF-3, C-termin, score 2.1e-51
471473000392	HMMPfam hit to PF01632, Ribosomal protein L35,score 2.6e-11
471473000393	HMMPfam hit to PF00453, Ribosomal protein L20,score 2.4e-32
471473000394	PS00937 Ribosomal protein L20 signature.
471473000395	HMMPfam hit to PF02912, Aminoacyl tRNA synthetase class II, N, score 8e-26
471473000396	HMMPfam hit to PF01409, tRNA synthetases class II core domain, score 1.4e-145
471473000397	PS00197 2Fe-2S ferredoxins, iron-sulfur binding region signature.
471473000398	PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.
471473000399	HMMPfam hit to PF03739, Predicted permease YjgP/YjgQ family, score 2.2e-70
471473000400	4 probable transmembrane helices predicted for CTL0210 by TMHMM2.0 at aa 7-29, 279-301, 313-335 and 340-362
471473000401	HMMPfam hit to PF03739, Predicted permease YjgP/YjgQ family, score 7e-79
471473000402	6 probable transmembrane helices predicted for CTL0211 by TMHMM2.0 at aa 17-39, 54-76, 97-116,274-293,300-317 and 322-344
471473000403	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000404	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000405	HMMPfam hit to PF01171, PP-loop family, score 2e-69
471473000406	HMMPfam hit to PF06508, ExsB, score 0.0036
471473000407	2 probable transmembrane helices predicted for CTL0213 by TMHMM2.0 at aa 15-37 and 372-394
471473000408	HMMPfam hit to PF06480, FtsH Extracellular, score 1.8e-36
471473000409	HMMPfam hit to PF00004, ATPase family associated with various c, score 1.3e-91
471473000410	HMMPfam hit to PF07728, ATPase family associated with various c, score 0.00022
471473000411	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000412	PS00674 AAA-protein family signature.
471473000413	HMMPfam hit to PF01434, Peptidase family M41, score 4.3e-121
471473000414	HMMPfam hit to PF00575, S1 RNA binding domain,score 3.3e-16
471473000415	HMMPfam hit to PF00013, KH domain, score 5.7e-16
471473000416	HMMPfam hit to PF03725, 3' exoribonuclease family,domain, score 5.7e-23
471473000417	HMMPfam hit to PF01138, 3' exoribonuclease family,domain, score 1.3e-46
471473000418	HMMPfam hit to PF03726, Polyribonucleotide nucleotidyltransferase,, score 0.00014
471473000419	HMMPfam hit to PF03725, 3' exoribonuclease family,domain, score 1.1e-14
471473000420	HMMPfam hit to PF01138, 3' exoribonuclease family,domain, score 8.9e-28
471473000421	HMMPfam hit to PF00312, Ribosomal protein S15,score 7.6e-27
471473000422	PS00362 Ribosomal protein S15 signature.
471473000423	HMMPfam hit to PF00383, Cytidine and deoxycytidylate deaminas, score 1.8e-45
471473000424	4 probable transmembrane helices predicted for CTL0218 by TMHMM2.0 at aa 22-44, 120-142, 147-165 and 185-207
471473000425	PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
471473000426	HMMPfam hit to PF05302, Protein of unknown function (DUF720), score 1.7e-90
471473000427	HMMPfam hit to PF05302, Protein of unknown function (DUF720), score 3.3e-82
471473000428	HMMPfam hit to PF05302, Protein of unknown function (DUF720), score 5.2e-76
471473000429	4 probable transmembrane helices predicted for CTL0223 by TMHMM2.0 at aa 15-37, 44-66, 71-88 and 95-117
471473000430	HMMPfam hit to PF00557, metallopeptidase family M24,score 4.8e-54
471473000431	PS00215 Mitochondrial energy transfer proteins signature.
471473000432	HMMPfam hit to PF02810, SEC-C motif, score 5e-10
471473000433	HMMPfam hit to PF01914, MarC family integral membrane protein, score 2.3e-82
471473000434	6 probable transmembrane helices predicted for CTL0225 by TMHMM2.0 at aa 10-29, 41-63, 67-86,107-129,139-161 and 174-196
471473000435	PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.
471473000436	HMMPfam hit to PF01914, MarC family integral membrane protein, score 0.00012
471473000437	5 probable transmembrane helices predicted for CTL0226 by TMHMM2.0 at aa 47-66, 73-92, 112-134, 139-161 and 171-193
471473000438	6 probable transmembrane helices predicted for CTL0227 by TMHMM2.0 at aa 4-21, 59-81, 91-113,172-194,214-236 and 257-274
471473000439	HMMPfam hit to PF00528, Binding-protein-dependent transport syst, score 1.6e-31
471473000440	The sequence has been checked and is believed to be correct.fumarate hydratase (pseudogene)
471473000441	HMMPfam hit to PF00206, Lyase, score 3.7e-132
471473000442	HMMPfam hit to PF01740, STAS domain, score 4.7e-19
471473000443	HMMPfam hit to PF00916, Sulfate transporter family,score 3.5e-57
471473000444	HMMPfam hit to PF00860, Permease family, score 0.0087
471473000445	10 probable transmembrane helices predicted for CTL0231 by TMHMM2.0 at aa 33-55, 60-82, 105-127,134-151,177-199, 206-223, 257-279, 325-347, 357-379 and 386-408
471473000446	11 probable transmembrane helices predicted for CTL0232 by TMHMM2.0 at aa 7-25, 30-49, 61-78,98-127,139-158, 173-195, 240-259, 279-301, 322-344, 359-381 and 394-413
471473000447	HMMPfam hit to PF03600, Citrate transporter, score 0.00094
471473000448	HMMPfam hit to PF03572, Peptidase family S41, score 6.1e-44
471473000449	HMMPfam hit to PF02401, LytB protein, score 2.9e-183
471473000450	4 probable transmembrane helices predicted for CTL0236 by TMHMM2.0 at aa 316-338, 342-364, 385-407 and 422-441
471473000451	HMMPfam hit to PF07720, Tetratricopeptide repeat,score 1.5e-08
471473000452	HMMPfam hit to PF00589, Phage integrase family,score 1.9e-39
471473000453	HMMPfam hit to PF02899, Phage integrase, N-terminal SAM-like, score 1.1e-24
471473000454	HMMPfam hit to PF02922, Isoamylase N-terminal domain, score 1.3e-33
471473000455	HMMPfam hit to PF00128, Alpha amylase, catalytic domain, score 8.5e-09
471473000456	1 probable transmembrane helix predicted for CTL0246 by TMHMM2.0 at aa 33-55
471473000457	1 probable transmembrane helix predicted for CTL0247 by TMHMM2.0 at aa 41-60
471473000458	HMMPfam hit to PF03797, Autotransporter beta-domain,score 1.7e-38
471473000459	HMMPfam hit to PF07548, Chlamydia polymorphic membrane protei, score 3.7e-51
471473000460	PS00237 G-protein coupled receptors signature.
471473000461	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.07
471473000462	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 1
471473000463	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.79
471473000464	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 3.7
471473000465	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 2.2
471473000466	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 12
471473000467	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 1
471473000468	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 9.6
471473000469	HMMPfam hit to PF03797, Autotransporter beta-domain,score 5.2e-41
471473000470	HMMPfam hit to PF07548, Chlamydia polymorphic membrane protei, score 3.1e-53
471473000471	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 5.8
471473000472	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 5.5
471473000473	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.19
471473000474	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.15
471473000475	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 4.8
471473000476	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 7.7
471473000477	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.27
471473000478	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 2.2
471473000479	PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
471473000480	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.87
471473000481	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 1.6
471473000482	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 9.6
471473000483	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 13
471473000484	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.16
471473000485	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000486	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.18
471473000487	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.011
471473000488	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 2.8
471473000489	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 12
471473000490	HMMPfam hit to PF07548, Chlamydia polymorphic membrane protei, score 3.9e-53
471473000491	HMMPfam hit to PF03797, Autotransporter beta-domain,score 3.3e-40
471473000492	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 2.1
471473000493	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 8.9
471473000494	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 1.1
471473000495	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.0032
471473000496	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.3
471473000497	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 50
471473000498	HMMPfam hit to PF07548, Chlamydia polymorphic membrane protei, score 9.4e-49
471473000499	HMMPfam hit to PF03797, Autotransporter beta-domain,score 4.4e-37
471473000500	PS00435 Peroxidases proximal heme-ligand signature.
471473000501	HMMPfam hit to PF03797, Autotransporter beta-domain,score 5.5e-40
471473000502	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000503	HMMPfam hit to PF07548, Chlamydia polymorphic membrane protei, score 1.7e-54
471473000504	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.54
471473000505	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.043
471473000506	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.086
471473000507	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.13
471473000508	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.075
471473000509	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.36
471473000510	HMMPfam hit to PF04070, Domain of unknown function (DUF378), score 2.1e-43
471473000511	2 probable transmembrane helices predicted for CTL0256 by TMHMM2.0 at aa 5-27 and 42-64
471473000512	HMMPfam hit to PF02686, Glu-tRNAGln amidotransferase C subunit, score 7e-32
471473000513	HMMPfam hit to PF01425, Amidase, score 4.6e-213
471473000514	PS00571 Amidases signature.
471473000515	HMMPfam hit to PF02934, PET112 family, N terminal region, score 3.8e-139
471473000516	PS01234 PET112 family signature.
471473000517	HMMPfam hit to PF01162, PET112 family, C terminal region, score 1.2e-34
471473000518	HMMPfam hit to PF02637, GatB/Yqey domain, score 5.2e-54
471473000519	4 probable transmembrane helices predicted for CTL0260 by TMHMM2.0 at aa 32-54, 59-81, 96-118 and 123-145
471473000520	3 probable transmembrane helices predicted for CTL0261 by TMHMM2.0 at aa 47-69, 89-111 and 118-140
471473000521	HMMPfam hit to PF01351, Ribonuclease HII, score 2.5e-09
471473000522	1 probable transmembrane helix predicted for CTL0264 by TMHMM2.0 at aa 117-139
471473000523	HMMPfam hit to PF03279, Bacterial lipid A biosynthesis acyltr, score 7.2e-155
471473000524	1 probable transmembrane helix predicted for CTL0265 by TMHMM2.0 at aa 12-34
471473000525	1 probable transmembrane helix predicted for CTL0266 by TMHMM2.0 at aa 13-35
471473000526	HMMPfam hit to PF02457, Domain of unknown function DUF147, score 1.8e-67
471473000527	3 probable transmembrane helices predicted for CTL0267 by TMHMM2.0 at aa 4-26, 28-50 and 65-87
471473000528	HMMPfam hit to PF01654, Bacterial Cytochrome Ubiquinol Oxidase, score 8.8e-135
471473000529	9 probable transmembrane helices predicted for CTL0268 by TMHMM2.0 at aa 10-32, 52-74, 94-116,128-150,185-207, 220-239, 321-343, 356-378 and 406-428
471473000530	8 probable transmembrane helices predicted for CTL0269 by TMHMM2.0 at aa 5-27, 66-88, 123-145,165-187,200-222, 237-259, 272-294 and 321-343
471473000531	HMMPfam hit to PF02322, Cytochrome oxidase subunit II, score 3.5e-183
471473000532	HMMPfam hit to PF02562, PhoH-like protein, score 8.8e-23
471473000533	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000534	HMMPfam hit to PF08239, Bacterial SH3 domain, score 0.0031
471473000535	HMMPfam hit to PF08239, Bacterial SH3 domain, score 2.5e-08
471473000536	1 probable transmembrane helix predicted for CTL0273 by TMHMM2.0 at aa 25-47
471473000537	HMMPfam hit to PF00133, tRNA synthetases class I (I,L, M and V), score 1.3e-279
471473000538	PS00178 Aminoacyl-transfer RNA synthetases class-I signature.
471473000539	HMMPfam hit to PF08264, Anticodon-binding domain,score 4e-58
471473000540	2 probable transmembrane helices predicted for CTL0275 by TMHMM2.0 at aa 85-104 and 598-620
471473000541	PS00761 Signal peptidases I signature 3.
471473000542	HMMPfam hit to PF00717, Peptidase S24-like, score 7.1e-09
471473000543	1 probable transmembrane helix predicted for CTL0276 by TMHMM2.0 at aa 12-29
471473000544	HMMPfam hit to PF01197, Ribosomal protein L31,score 1.2e-11
471473000545	PS01143 Ribosomal protein L31 signature.
471473000546	HMMPfam hit to PF03462, PCRF domain, score 4.4e-56
471473000547	HMMPfam hit to PF00472, Peptidyl-tRNA hydrolase domain, score 1.4e-80
471473000548	PS00745 Prokaryotic-type class I peptide chain release factors signature.
471473000549	HMMPfam hit to PF05175, Methyltransferase small domain, score 5.4e-08
471473000550	PS00262 Insulin family signature.
471473000551	PS00092 N-6 Adenine-specific DNA methylases signature.
471473000552	HMMPfam hit to PF02881, SRP54-type protein, helical bundle domain, score 3.2e-31
471473000553	HMMPfam hit to PF00448, SRP54-type protein, GTPase domain, score 6.5e-111
471473000554	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000555	HMMPfam hit to PF02978, Signal peptide binding domain, score 3.9e-49
471473000556	HMMPfam hit to PF00886, Ribosomal protein S16,score 6.4e-17
471473000557	HMMPfam hit to PF01746, tRNA (Guanine-1)-methyltransferase, score 9.3e-53
471473000558	HMMPfam hit to PF01245, Ribosomal protein L19,score 7.6e-45
471473000559	HMMPfam hit to PF01351, Ribonuclease HII, score 2.4e-64
471473000560	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000561	PS00856 Guanylate kinase signature.
471473000562	HMMPfam hit to PF00625, Guanylate kinase, score 7.4e-30
471473000563	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000564	10 probable transmembrane helices predicted for CTL0289 by TMHMM2.0 at aa 5-27, 31-48, 60-82,86-108,115-137, 147-169, 190-212, 227-246, 253-275 and 285-304
471473000565	2 probable transmembrane helices predicted for CTL0291 by TMHMM2.0 at aa 12-34 and 38-57
471473000566	PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
471473000567	The sequence has been checked and is believed to be correct.conserved hypothetical protein (pseudogene)
471473000568	1 probable transmembrane helix predicted for CTL0293 by TMHMM2.0 at aa 21-38
471473000569	HMMPfam hit to PF05496, Holliday junction DNA helicase ruvB N-termin, score 2.1e-08
471473000570	HMMPfam hit to PF00004, ATPase family associated with various cellul, score 1.7e-37
471473000571	HMMPfam hit to PF07728, ATPase family associated with various cellul, score 2.4e-05
471473000572	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000573	HMMPfam hit to PF05491, Holliday junction DNA helicase ruvB C-termin, score 1.9e-49
471473000574	PS00070 Aldehyde dehydrogenases cysteine active site.
471473000575	HMMPfam hit to PF00128, Alpha amylase, catalytic domain, score 8.6e-16
471473000576	HMMPfam hit to PF02922, Isoamylase N-terminal domain, score 1.8e-18
471473000577	HMMPfam hit to PF05932, Tir chaperone protein (CesT), score 1.2e-37
471473000578	HMMPfam hit to PF00436, Single-strand binding protein family, score 6.1e-10
471473000579	HMMPfam hit to PF02789, Cytosol aminopeptidase family, N-term, score 2.3e-26
471473000580	HMMPfam hit to PF00883, Cytosol aminopeptidase family, cataly, score 1.8e-146
471473000581	HMMPfam hit to PF07382, Histone H1-like nucleoprotein HC2, score 4e-99
471473000582	HMMPfam hit to PF06144, DNA polymerase III, delta subunit, score 0.00038
471473000583	PS00070 Aldehyde dehydrogenases cysteine active site.
471473000584	HMMPfam hit to PF06969, HemN C-terminal region,score 3e-24
471473000585	HMMPfam hit to PF04055, Radical SAM superfamily,score 2.6e-28
471473000586	HMMPfam hit to PF00676, Dehydrogenase E1 component,score 1.8e-43
471473000587	HMMPfam hit to PF02779, Transketolase, pyridine binding domain, score 2.6e-58
471473000588	HMMPfam hit to PF00364, Biotin-requiring enzyme,score 3.4e-13
471473000589	PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site.
471473000590	HMMPfam hit to PF00198, 2-oxoacid dehydrogenases acyltransferas, score 4e-135
471473000591	HMMPfam hit to PF02578, Uncharacterised ACR, YfiH family COG1496, score 1.1e-115
471473000592	HMMPfam hit to PF04551, GcpE protein, score 4.3e-59
471473000593	2 probable transmembrane helices predicted for CTL0314 by TMHMM2.0 at aa 26-48 and 53-75
471473000594	HMMPfam hit to PF00111, 2Fe-2S iron-sulfur cluster binding domain, score 8.1e-13
471473000595	PS00197 2Fe-2S ferredoxins, iron-sulfur binding region signature.
471473000596	7 probable transmembrane helices predicted for CTL0316 by TMHMM2.0 at aa 33-52, 56-78, 90-112,127-149,218-237, 252-274 and 294-316
471473000597	HMMPfam hit to PF00771, FHIPEP family, score 2e-230
471473000598	HMMPfam hit to PF04542, Sigma-70 region, score 2.5e-21
471473000599	HMMPfam hit to PF04539, Sigma-70 region, score 9.9e-07
471473000600	HMMPfam hit to PF08281, Sigma-70, region, score 6.9e-10
471473000601	HMMPfam hit to PF04545, Sigma-70, region, score 7.2e-21
471473000602	HMMPfam hit to PF00579, tRNA synthetases class I (W and Y), score 1.3e-120
471473000603	HMMPfam hit to PF01479, S4 domain, score 3.6e-08
471473000604	HMMPfam hit to PF03446, NAD binding domain of 6-phosphogluconat, score 7.9e-88
471473000605	HMMPfam hit to PF00393, 6-phosphogluconate dehydrogenase, C-ter, score 8.7e-180
471473000606	PS00461 6-phosphogluconate dehydrogenase signature.
471473000607	HMMPfam hit to PF06421, GTP-binding protein LepA C-terminus, score 1e-73
471473000608	HMMPfam hit to PF00679, Elongation factor G C-terminus, score 8.7e-33
471473000609	HMMPfam hit to PF03144, Elongation factor Tu domain,score 5.7e-13
471473000610	HMMPfam hit to PF00009, Elongation factor Tu GTP binding domain, score 6.9e-71
471473000611	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000612	HMMPfam hit to PF03219, TLC ATP/ADP transporter,score 0
471473000613	11 probable transmembrane helices predicted for CTL0321 by TMHMM2.0 at aa 27-44, 59-81, 93-115,149-171,184-206, 221-243, 284-306, 321-343, 350-372,382-401 and 456-478
471473000614	PS00430 TonB-dependent receptor proteins signature 1.
471473000615	HMMPfam hit to PF01297, Periplasmic solute binding protein family, score 4.8e-129
471473000616	HMMPfam hit to PF00005, ABC transporter, score 6.7e-46
471473000617	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000618	PS00211 ABC transporters family signature.
471473000619	HMMPfam hit to PF00950, ABC 3 transport family,score 1.2e-13
471473000620	7 probable transmembrane helices predicted for CTL0325 by TMHMM2.0 at aa 12-34, 68-90, 102-120,143-165,190-212, 232-254 and 275-297
471473000621	HMMPfam hit to PF02742, Iron dependent repressor,metal binding, score 2.2e-14
471473000622	10 probable transmembrane helices predicted for CTL0326 by TMHMM2.0 at aa 5-24, 39-61, 68-90,95-114,127-144, 167-189, 202-224, 228-250, 255-277 and 287-306
471473000623	HMMPfam hit to PF00950, ABC 3 transport family,score 2.2e-11
471473000624	HMMPfam hit to PF02670, 1-deoxy-D-xylulose 5-phosphate reduct, score 5.7e-59
471473000625	HMMPfam hit to PF08436, 1-deoxy-D-xylulose 5-phosphate reduct, score 6.3e-57
471473000626	4 probable transmembrane helices predicted for CTL0328 by TMHMM2.0 at aa 4-26, 103-125, 558-580 and 593-610
471473000627	HMMPfam hit to PF02163, Peptidase family M50, score 1e-80
471473000628	PS00142 Neutral zinc metallopeptidases,zinc-binding region signature.
471473000629	PS00136 Serine proteases, subtilase family,aspartic acid active site.
471473000630	HMMPfam hit to PF02463, RecF/RecN/SMC N terminal domain, score 2.3e-10
471473000631	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000632	HMMPfam hit to PF02768, DNA polymerase III beta subunit, C-te, score 9.3e-08
471473000633	HMMPfam hit to PF02767, DNA polymerase III beta subunit, cent, score 3e-23
471473000634	HMMPfam hit to PF00712, DNA polymerase III beta subunit, N-te, score 5e-21
471473000635	HMMPfam hit to PF01668, SmpB protein, score 1e-26
471473000636	PS01317 Protein smpB signature.
471473000637	HMMPfam hit to PF02424, ApbE family, score 3.4e-165
471473000638	PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
471473000639	HMMPfam hit to PF02882, Tetrahydrofolate dehydrogenase/cyclohyd, score 3.5e-102
471473000640	PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2.
471473000641	HMMPfam hit to PF00763, Tetrahydrofolate dehydrogenase/cyclohyd, score 1.5e-63
471473000642	2 probable transmembrane helices predicted for CTL0335 by TMHMM2.0 at aa 20-53 and 65-87
471473000643	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000644	2 probable transmembrane helices predicted for CTL0337 by TMHMM2.0 at aa 47-66 and 78-100
471473000645	HMMPfam hit to PF00614, Phospholipase D Active site motif, score 0.41
471473000646	HMMPfam hit to PF00614, Phospholipase D Active site motif, score 0.013
471473000647	1 probable transmembrane helix predicted for CTL0339 by TMHMM2.0 at aa 7-29
471473000648	HMMPfam hit to PF01977,3-octaprenyl-4-hydroxybenzoate carboxy-lyase, score 1.9e-220
471473000649	HMMPfam hit to PF00830, Ribosomal L28 family, score 4.4e-12
471473000650	HMMPfam hit to PF02446,4-alpha-glucanotransferase,score 2.8e-281
471473000651	HMMPfam hit to PF05932, Tir chaperone protein (CesT), score 1.1e-36
471473000652	HMMPfam hit to PF00771, FHIPEP family, score 0
471473000653	6 probable transmembrane helices predicted for CTL0345 by TMHMM2.0 at aa 27-44, 57-79, 119-141,208-230,245-267 and 309-331
471473000654	HMMPfam hit to PF01312, FlhB HrpN YscU SpaS Family,score 2.2e-171
471473000655	4 probable transmembrane helices predicted for CTL0346 by TMHMM2.0 at aa 38-60, 80-102, 136-158 and 183-205
471473000656	PS00443 Glutamine amidotransferases class-II active site.
471473000657	HMMPfam hit to PF01926, GTPase of unknown function,score 8.9e-29
471473000658	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000659	HMMPfam hit to PF06071, Protein of unknown function (DUF933), score 1.2e-48
471473000660	HMMPfam hit to PF01687, Riboflavin kinase, score 4.8e-31
471473000661	HMMPfam hit to PF06574, FAD synthetase, score 1.9e-62
471473000662	HMMPfam hit to PF01509, TruB family pseudouridylate synthase (N term, score 8.2e-49
471473000663	HMMPfam hit to PF02033, Ribosome-binding factor A,score 1.8e-12
471473000664	HMMPfam hit to PF03144, Elongation factor Tu domain,score 1.9e-09
471473000665	PS01176 Initiation factor 2 signature.
471473000666	HMMPfam hit to PF03144, Elongation factor Tu domain,score 1.2e-10
471473000667	HMMPfam hit to PF00009, Elongation factor Tu GTP binding domain, score 5.7e-46
471473000668	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000669	HMMPfam hit to PF04760, Translation initiation factor IF-2, N-ter, score 1.8e-11
471473000670	HMMPfam hit to PF00575, S1 RNA binding domain,score 4.8e-07
471473000671	HMMPfam hit to PF08529, NusA N-terminal domain,score 4.5e-62
471473000672	HMMPfam hit to PF00575, S1 RNA binding domain,score 1.2e-22
471473000673	HMMPfam hit to PF00575, S1 RNA binding domain,score 8.7e-25
471473000674	HMMPfam hit to PF00575, S1 RNA binding domain,score 1.9e-25
471473000675	HMMPfam hit to PF00575, S1 RNA binding domain,score 8.9e-22
471473000676	HMMPfam hit to PF00575, S1 RNA binding domain,score 1.6e-16
471473000677	HMMPfam hit to PF00575, S1 RNA binding domain,score 5.3e-17
471473000678	HMMPfam hit to PF07992, Pyridine nucleotide-disulphide oxidoreduc, score 2.7e-53
471473000679	PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site.
471473000680	HMMPfam hit to PF00070, Pyridine nucleotide-disulphide oxidoreduc, score 9.2e-25
471473000681	HMMPfam hit to PF01648, 4'-phosphopantetheinyl transferase superfami, score 4e-27
471473000682	2 probable transmembrane helices predicted for CTL0356 by TMHMM2.0 at aa 5-22 and 32-54
471473000683	1 probable transmembrane helix predicted for CTL0357 by TMHMM2.0 at aa 43-65
471473000684	HMMPfam hit to PF08282, haloacid dehalogenase-like hydrolase, score 4e-07
471473000685	HMMPfam hit to PF00849, RNA pseudouridylate synthase, score 2.7e-52
471473000686	PS01129 Rlu family of pseudouridine synthase signature.
471473000687	HMMPfam hit to PF01479, S4 domain, score 5.4e-05
471473000688	HMMPfam hit to PF00730, HhH-GPD superfamily base excision DNA repair, score 4.4e-22
471473000689	HMMPfam hit to PF00633, Helix-hairpin-helix motif,score 2.6e-05
471473000690	HMMPfam hit to PF01784, NIF3 (NGG1p interacting factor 3), score 2.5e-89
471473000691	HMMPfam hit to PF00118, TCP-1/cpn60 chaperonin family, score 8.4e-187
471473000692	PS00296 Chaperonins cpn60 signature.
471473000693	HMMPfam hit to PF00166, Chaperonin 10 Kd subunit,score 5.2e-41
471473000694	PS00681 Chaperonins cpn10 signature.
471473000695	HMMPfam hit to PF01432, Peptidase family M3, score 2.5e-165
471473000696	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000697	HMMPfam hit to PF08439, Oligopeptidase F, score 4.8e-18
471473000698	HMMPfam hit to PF02861, Clp amino terminal domain,score 3e-10
471473000699	HMMPfam hit to PF02861, Clp amino terminal domain,score 6.6e-10
471473000700	HMMPfam hit to PF00004, ATPase family associated with various cellul, score 1.4e-10
471473000701	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000702	PS00870 Chaperonins clpA/B signature 1.
471473000703	HMMPfam hit to PF07724, ATPase family associated with various cellul, score 1.6e-102
471473000704	HMMPfam hit to PF07728, ATPase family associated with various cellul, score 3.2e-05
471473000705	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000706	2 probable transmembrane helices predicted for CTL0370 by TMHMM2.0 at aa 51-73 and 83-105
471473000707	2 probable transmembrane helices predicted for CTL0371 by TMHMM2.0 at aa 39-61 and 65-87
471473000708	PS00044 Bacterial regulatory proteins, lysR family signature.
471473000709	2 probable transmembrane helices predicted for CTL0372 by TMHMM2.0 at aa 39-60 and 70-92
471473000710	2 probable transmembrane helices predicted for CTL0373 by TMHMM2.0 at aa 34-56 and 66-88
471473000711	HMMPfam hit to PF04156, IncA protein, score 1.4e-24
471473000712	2 probable transmembrane helices predicted for CTL0374 by TMHMM2.0 at aa 12-34 and 38-57
471473000713	PS00615 C-type lectin domain signature.
471473000714	HMMPfam hit to PF00834, Ribulose-phosphate 3 epimerase family, score 3.6e-82
471473000715	PS01085 Ribulose-phosphate 3-epimerase family signature 1.
471473000716	HMMPfam hit to PF01132, Elongation factor P (EF-P) OB domain, score 0.00038
471473000717	PS01275 Elongation factor P signature.
471473000718	HMMPfam hit to PF00364, Biotin-requiring enzyme,score 1.3e-27
471473000719	HMMPfam hit to PF00289, Carbamoyl-phosphate synthase L chain,, score 4.2e-44
471473000720	HMMPfam hit to PF08443, RimK-like ATP-grasp domain,score 7.9e-05
471473000721	HMMPfam hit to PF02786, Carbamoyl-phosphate synthase L chain,, score 1.7e-94
471473000722	HMMPfam hit to PF02222, ATP-grasp domain, score 0.00089
471473000723	PS00867 Carbamoyl-phosphate synthase subdomain signature 2.
471473000724	HMMPfam hit to PF02785, Biotin carboxylase C-terminal domain, score 6e-65
471473000725	HMMPfam hit to PF00572, Ribosomal protein L13,score 5.5e-49
471473000726	PS00783 Ribosomal protein L13 signature.
471473000727	PS00063 Aldo/keto reductase family putative active site signature.
471473000728	PS00030 Eukaryotic putative RNA-binding region RNP-1 signature.
471473000729	HMMPfam hit to PF00380, Ribosomal protein S9/S16,score 5.7e-48
471473000730	HMMPfam hit to PF00877, NlpC/P60 family, score 1.5e-08
471473000731	HMMPfam hit to PF00406, Adenylate kinase, score 5.5e-42
471473000732	HMMPfam hit to PF00528, Binding-protein-dependent transport syst, score 4.5e-17
471473000733	4 probable transmembrane helices predicted for CTL0384 by TMHMM2.0 at aa 15-37, 58-80, 84-103 and 187-206
471473000734	PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.
471473000735	HMMPfam hit to PF00005, ABC transporter, score 7.7e-54
471473000736	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000737	PS00211 ABC transporters family signature.
471473000738	1 probable transmembrane helix predicted for CTL0386 by TMHMM2.0 at aa 9-31
471473000739	HMMPfam hit to PF03631, Ribonuclease BN-like family,score 1.5e-05
471473000740	6 probable transmembrane helices predicted for CTL0387 by TMHMM2.0 at aa 42-64, 100-122, 143-165,185-207,219-241 and 256-278
471473000741	HMMPfam hit to PF08241, Methyltransferase domain,score 5.1e-12
471473000742	HMMPfam hit to PF08242, Methyltransferase domain,score 1.7e-14
471473000743	PS01186 EGF-like domain signature 2.
471473000744	2 probable transmembrane helices predicted for CTL0389 by TMHMM2.0 at aa 31-53 and 80-98
471473000745	4 probable transmembrane helices predicted for CTL0390 by TMHMM2.0 at aa 20-42, 121-143, 211-233 and 243-265
471473000746	HMMPfam hit to PF02230,Phospholipase/Carboxylesterase, score 2.2e-103
471473000747	HMMPfam hit to PF01300, yrdC domain, score 1.9e-31
471473000748	HMMPfam hit to PF01244, Membrane dipeptidase (Peptidase family, score 2.3e-13
471473000749	HMMPfam hit to PF00496, Bacterial extracellular solute-binding prot, score 1.6e-66
471473000750	PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
471473000751	7 probable transmembrane helices predicted for CTL0395 by TMHMM2.0 at aa 5-22, 29-51, 55-77,84-103,127-149, 165-187 and 192-214
471473000752	HMMPfam hit to PF02592, Uncharacterized ACR, YhhQ family COG1738, score 2.9e-67
471473000753	HMMPfam hit to PF02810, SEC-C motif, score 8.3e-10
471473000754	1 probable transmembrane helix predicted for CTL0399 by TMHMM2.0 at aa 231-253
471473000755	HMMPfam hit to PF00069, Protein kinase domain,score 1.5e-06
471473000756	HMMPfam hit to PF03781, Domain of unknown function (DUF323), score 2.3e-103
471473000757	HMMPfam hit to PF01653, NAD-dependent DNA ligase adenylation, score 3.6e-102
471473000758	HMMPfam hit to PF03120, NAD-dependent DNA ligase OB-fold doma, score 9.5e-49
471473000759	PS01056 NAD-dependent DNA ligase signature 2.
471473000760	HMMPfam hit to PF03119, NAD-dependent DNA ligase C4 zinc fing, score 1.6e-08
471473000761	HMMPfam hit to PF00633, Helix-hairpin-helix motif,score 4.4e-08
471473000762	HMMPfam hit to PF00533, BRCA1 C Terminus (BRCT) domain, score 1.3e-17
471473000763	4 probable transmembrane helices predicted for CTL0402 by TMHMM2.0 at aa 76-98, 100-122, 848-870 and 877-899
471473000764	HMMPfam hit to PF01494, FAD binding domain, score 9.2e-05
471473000765	HMMPfam hit to PF00471, Ribosomal protein L33,score 2.8e-14
471473000766	4 probable transmembrane helices predicted for CTL0406 by TMHMM2.0 at aa 21-43, 364-386, 407-429 and 464-486
471473000767	HMMPfam hit to PF02687, Predicted permease, score 3.7e-40
471473000768	HMMPfam hit to PF00005, ABC transporter, score 7.7e-55
471473000769	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000770	PS00211 ABC transporters family signature.
471473000771	HMMPfam hit to PF01823, MAC/Perforin domain, score 1.1e-63
471473000772	The sequence has been checked and is believed to be correct.phosphatidylcholine-hydrolyzing phospholipase D (PLD) protein (pseudogene)
471473000773	HMMPfam hit to PF00614, Phospholipase D Active site motif, score 0.55
471473000774	HMMPfam hit to PF00614, Phospholipase D Active site motif, score 2
471473000775	HMMPfam hit to PF00614, Phospholipase D Active site motif, score 1.6
471473000776	HMMPfam hit to PF00614, Phospholipase D Active site motif, score 0.009
471473000777	indel in L2 and Harl13: acgattccg
471473000778	HMMPfam hit to PF00614, Phospholipase D Active site motif, score 1.3
471473000779	HMMPfam hit to PF00614, Phospholipase D Active site motif, score 0.026
471473000780	The sequence has been checked and is believed to be correct.phosphatidylcholine-hydrolyzing phospholipase D (PLD) protein (pseudogene)
471473000781	HMMPfam hit to PF00614, Phospholipase D Active site motif, score 2.3
471473000782	HMMPfam hit to PF00614, Phospholipase D Active site motif, score 0.00026
471473000783	The sequence has been checked and is believed to be correct.conserved hypothetical protein (pseudogene)
471473000784	The sequence has been checked and is believed to be correct.hypothetical protein (pseudogene)
471473000785	1 probable transmembrane helix predicted for CTL0418 by TMHMM2.0 at aa 47-69
471473000786	1 probable transmembrane helix predicted for CTL0419 by TMHMM2.0 at aa 63-85
471473000787	HMMPfam hit to PF00612, IQ calmodulin-binding motif,score 0.00048
471473000788	PS00018 EF-hand calcium-binding domain.
471473000789	1 probable transmembrane helix predicted for CTL0419A by TMHMM2.0 at aa 31-53
471473000790	cytotoxin (remnant)
471473000791	cytotoxin (fragment)
471473000792	HMMPfam hit to PF01371, Trp repressor protein,score 6.9e-41
471473000793	HMMPfam hit to PF00291, Pyridoxal-phosphate dependent enzyme, score 5.7e-121
471473000794	PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site.
471473000795	HMMPfam hit to PF00290, Tryptophan synthase alpha chain, score 2.4e-19
471473000796	The sequence has been checked and is believed to be correct.conserved hypothetical protein (pseudogene)
471473000797	PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
471473000798	HMMPfam hit to PF00496, Bacterial extracellular solute-binding prot, score 3.5e-70
471473000799	HMMPfam hit to PF02600, Disulfide bond formation protein DsbB, score 2.3e-64
471473000800	4 probable transmembrane helices predicted for CTL0428 by TMHMM2.0 at aa 7-29, 39-58, 71-93 and 108-130
471473000801	PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
471473000802	1 probable transmembrane helix predicted for CTL0429 by TMHMM2.0 at aa 12-29
471473000803	10 probable transmembrane helices predicted for CTL0430 by TMHMM2.0 at aa 17-39, 54-76, 89-111,141-163,170-192, 202-224, 303-325, 335-352, 359-381 and 385-402
471473000804	2 probable transmembrane helices predicted for CTL0431 by TMHMM2.0 at aa 2-24 and 29-51
471473000805	HMMPfam hit to PF00005, ABC transporter, score 3.2e-40
471473000806	PS00211 ABC transporters family signature.
471473000807	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000808	HMMPfam hit to PF02348, Cytidylyltransferase, score 7.6e-94
471473000809	HMMPfam hit to PF06418, CTP synthase N-terminus,score 5.6e-192
471473000810	HMMPfam hit to PF00117, Glutamine amidotransferase class-I, score 7.2e-73
471473000811	HMMPfam hit to PF03652, Uncharacterised protein family (UPF0081), score 7.6e-60
471473000812	HMMPfam hit to PF00479, Glucose-6-phosphate dehydrogenase, NAD bindi, score 2.6e-47
471473000813	PS00069 Glucose-6-phosphate dehydrogenase active site.
471473000814	HMMPfam hit to PF02781, Glucose-6-phosphate dehydrogenase, C-termina, score 3e-125
471473000815	HMMPfam hit to PF02223, Thymidylate kinase, score 8.7e-86
471473000816	PS01331 Thymidylate kinase signature.
471473000817	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000818	HMMPfam hit to PF03989, DNA gyrase C-terminal domain, beta-prop, score 1.1e-11
471473000819	HMMPfam hit to PF03989, DNA gyrase C-terminal domain, beta-prop, score 2.5e-10
471473000820	HMMPfam hit to PF03989, DNA gyrase C-terminal domain, beta-prop, score 1.1e-15
471473000821	HMMPfam hit to PF03989, DNA gyrase C-terminal domain, beta-prop, score 1.6e-09
471473000822	HMMPfam hit to PF03989, DNA gyrase C-terminal domain, beta-prop, score 1.9e-11
471473000823	HMMPfam hit to PF03989, DNA gyrase C-terminal domain, beta-prop, score 3.7e-11
471473000824	HMMPfam hit to PF00521, DNA gyrase/topoisomerase IV,subunit A, score 6.6e-300
471473000825	HMMPfam hit to PF00986, DNA gyrase B subunit,carboxyl terminus, score 1.4e-44
471473000826	HMMPfam hit to PF01751, Toprim domain, score 1.2e-10
471473000827	PS00177 DNA topoisomerase II signature.
471473000828	HMMPfam hit to PF00204, DNA gyrase B, score 1.6e-91
471473000829	HMMPfam hit to PF02518, Histidine kinase-, DNA gyrase B-, and H, score 1.5e-27
471473000830	2 probable transmembrane helices predicted for CTL0444 by TMHMM2.0 at aa 33-55 and 60-82
471473000831	HMMPfam hit to PF01702, Queuine tRNA-ribosyltransferase, score 1.3e-54
471473000832	5 probable transmembrane helices predicted for CTL0446 by TMHMM2.0 at aa 291-313, 320-342, 375-397,409-431 and 451-469
471473000833	HMMPfam hit to PF01769, Divalent cation transporter,score 1.8e-54
471473000834	HMMPfam hit to PF00571, CBS domain pair, score 7.7e-17
471473000835	HMMPfam hit to PF03448, MgtE intracellular domain,score 3.1e-32
471473000836	3 probable transmembrane helices predicted for CTL0447 by TMHMM2.0 at aa 53-75, 85-107 and 175-197
471473000837	2 probable transmembrane helices predicted for CTL0448 by TMHMM2.0 at aa 34-56 and 63-85
471473000838	HMMPfam hit to PF00814, Glycoprotease family, score 4.4e-69
471473000839	PS01016 Glycoprotease family signature.
471473000840	PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
471473000841	HMMPfam hit to PF00496, Bacterial extracellular solute-binding prot, score 7.7e-67
471473000842	7 probable transmembrane helices predicted for CTL0451 by TMHMM2.0 at aa 9-31, 102-124, 133-155,175-197,218-240, 245-264 and 277-299
471473000843	HMMPfam hit to PF00528, Binding-protein-dependent transport syst, score 2.2e-42
471473000844	6 probable transmembrane helices predicted for CTL0452 by TMHMM2.0 at aa 19-41, 80-102, 122-141,145-167,191-213 and 241-263
471473000845	HMMPfam hit to PF00528, Binding-protein-dependent transport syst, score 5.1e-37
471473000846	HMMPfam hit to PF00005, ABC transporter, score 1.5e-49
471473000847	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000848	PS00211 ABC transporters family signature.
471473000849	HMMPfam hit to PF08352, Oligopeptide/dipeptide transporter, C-termi, score 8.6e-06
471473000850	HMMPfam hit to PF00005, ABC transporter, score 2.8e-55
471473000851	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000852	PS00211 ABC transporters family signature.
471473000853	HMMPfam hit to PF06685, Protein of unknown function (DUF1186), score 8.3e-194
471473000854	HMMPfam hit to PF00939, Sodium:sulfate symporter transmembrane, score 9.2e-275
471473000855	10 probable transmembrane helices predicted for CTL0456 by TMHMM2.0 at aa 7-29, 44-66, 120-142,178-200,213-235, 281-303, 324-346, 361-378, 390-412 and 445-467
471473000856	HMMPfam hit to PF00365, Phosphofructokinase, score 1.1e-09
471473000857	HMMPfam hit to PF00365, Phosphofructokinase, score 5e-08
471473000858	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000859	HMMPfam hit to PF04413,3-Deoxy-D-manno-octulosonic-acid tran, score 1.6e-102
471473000860	1 probable transmembrane helix predicted for CTL0460 by TMHMM2.0 at aa 5-27
471473000861	HMMPfam hit to PF08264, Anticodon-binding domain,score 3e-07
471473000862	HMMPfam hit to PF00133, tRNA synthetases class I (I,L, M and V), score 9.4e-13
471473000863	PS00178 Aminoacyl-transfer RNA synthetases class-I signature.
471473000864	HMMPfam hit to PF00202, Aminotransferase class-III,score 1.2e-48
471473000865	PS00435 Peroxidases proximal heme-ligand signature.
471473000866	HMMPfam hit to PF02622, Uncharacterized ACR,COG1678,score 3.8e-88
471473000867	HMMPfam hit to PF02577, Uncharacterised ACR,COG1259,score 2.5e-85
471473000868	HMMPfam hit to PF06026, Ribose 5-phosphate isomerase A (phosph, score 7.7e-85
471473000869	2 probable transmembrane helices predicted for CTL0466 by TMHMM2.0 at aa 36-58 and 68-90
471473000870	HMMPfam hit to PF01791, DeoC/LacD family aldolase,score 6.3e-58
471473000871	12 probable transmembrane helices predicted for CTL0468 by TMHMM2.0 at aa 7-26, 41-63, 83-105,120-142,149-171, 191-210, 231-253, 277-299, 328-350,357-379,400-422 and 437-459
471473000872	HMMPfam hit to PF00324, Amino acid permease, score 1.2e-05
471473000873	HMMPfam hit to PF01171, PP-loop family, score 4.2e-08
471473000874	HMMPfam hit to PF01975, Survival protein SurE,score 5.9e-105
471473000875	PS00063 Aldo/keto reductase family putative active site signature.
471473000876	HMMPfam hit to PF01040, UbiA prenyltransferase family, score 3.4e-71
471473000877	9 probable transmembrane helices predicted for CTL0471 by TMHMM2.0 at aa 21-43, 48-70, 90-109,113-135,140-162, 166-185, 216-238, 242-264 and 277-299
471473000878	HMMPfam hit to PF02441, Flavoprotein, score 1.6e-47
471473000879	1 probable transmembrane helix predicted for CTL0472 by TMHMM2.0 at aa 5-27
471473000880	6 probable transmembrane helices predicted for CTL0473 by TMHMM2.0 at aa 20-39, 54-76, 83-105,125-142,163-185 and 190-212
471473000881	HMMPfam hit to PF02588, Uncharacterized BCR, YitT family COG1284, score 7.5e-20
471473000882	HMMPfam hit to PF02588, Uncharacterized BCR, YitT family COG1284, score 1e-18
471473000883	PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
471473000884	HMMPfam hit to PF04156, IncA protein, score 2.1e-11
471473000885	2 probable transmembrane helices predicted for CTL0475 by TMHMM2.0 at aa 39-61 and 66-88
471473000886	HMMPfam hit to PF04156, IncA protein, score 1.1e-38
471473000887	2 probable transmembrane helices predicted for CTL0476 by TMHMM2.0 at aa 38-60 and 67-89
471473000888	2 probable transmembrane helices predicted for CTL0477 by TMHMM2.0 at aa 35-57 and 62-84
471473000889	2 probable transmembrane helices predicted for CTL0477A by TMHMM2.0 at aa 13-35 and 45-67
471473000890	PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
471473000891	2 probable transmembrane helices predicted for CTL0478 by TMHMM2.0 at aa 40-62 and 72-94
471473000892	2 probable transmembrane helices predicted for CTL0479 by TMHMM2.0 at aa 36-58 and 68-90
471473000893	HMMPfam hit to PF04156, IncA protein, score 1.3e-41
471473000894	2 probable transmembrane helices predicted for CTL0480 by TMHMM2.0 at aa 37-59 and 64-86
471473000895	HMMPfam hit to PF04156, IncA protein, score 1.7e-38
471473000896	2 probable transmembrane helices predicted for CTL0481 by TMHMM2.0 at aa 43-65 and 69-91
471473000897	HMMPfam hit to PF00375, Sodium:dicarboxylate symporter family, score 1.4e-10
471473000898	9 probable transmembrane helices predicted for CTL0482 by TMHMM2.0 at aa 21-43, 53-70, 83-105,146-164,177-199, 219-241, 292-314, 329-351 and 356-378
471473000899	12 probable transmembrane helices predicted for CTL0483 by TMHMM2.0 at aa 7-29, 44-66, 87-109,138-157,170-189, 245-267, 279-301, 316-338, 351-373,378-400,420-442 and 457-479
471473000900	HMMPfam hit to PF00209, Sodium:neurotransmitter symporter family, score 2.2e-11
471473000901	2 probable transmembrane helices predicted for CTL0484 by TMHMM2.0 at aa 30-52 and 67-89
471473000902	2 probable transmembrane helices predicted for CTL0485 by TMHMM2.0 at aa 110-132 and 142-164
471473000903	11 probable transmembrane helices predicted for CTL0486 by TMHMM2.0 at aa 28-47, 62-84, 93-115,125-146,159-177, 187-206, 241-263, 283-302, 309-331,394-416 and 670-692
471473000904	HMMPfam hit to PF00027, Cyclic nucleotide-binding domain, score 1.7e-21
471473000905	HMMPfam hit to PF00550, Phosphopantetheine attachment site, score 3.8e-18
471473000906	PS00012 Phosphopantetheine attachment site.
471473000907	HMMPfam hit to PF00106, short chain dehydrogenase,score 2.7e-38
471473000908	PS00061 Short-chain dehydrogenases/reductases family signature.
471473000909	HMMPfam hit to PF00698, Acyl transferase domain,score 2.4e-10
471473000910	HMMPfam hit to PF08541,3-Oxoacyl-[acyl-carrier-protein (ACP)], score 4.4e-40
471473000911	HMMPfam hit to PF08545,3-Oxoacyl-[acyl-carrier-protein (ACP)], score 5.2e-38
471473000912	HMMPfam hit to PF01751, Toprim domain, score 1.8e-14
471473000913	HMMPfam hit to PF07244, Surface antigen variable number repeat, score 5.1e-17
471473000914	HMMPfam hit to PF07244, Surface antigen variable number repeat, score 2.4e-12
471473000915	HMMPfam hit to PF07244, Surface antigen variable number repeat, score 3.8e-12
471473000916	HMMPfam hit to PF07244, Surface antigen variable number repeat, score 1.2e-13
471473000917	HMMPfam hit to PF01103, Surface antigen, score 8e-30
471473000918	HMMPfam hit to PF03938, Outer membrane protein (OmpH-like), score 1.5e-35
471473000919	HMMPfam hit to PF04613,UDP-3-O-[3-hydroxymyristoyl] glucosamine N-a, score 1e-43
471473000920	HMMPfam hit to PF00132, Bacterial transferase hexapeptide (three rep, score 1.3
471473000921	HMMPfam hit to PF00132, Bacterial transferase hexapeptide (three rep, score 0.47
471473000922	HMMPfam hit to PF00132, Bacterial transferase hexapeptide (three rep, score 1.3
471473000923	HMMPfam hit to PF00132, Bacterial transferase hexapeptide (three rep, score 0.025
471473000924	HMMPfam hit to PF00132, Bacterial transferase hexapeptide (three rep, score 0.076
471473000925	HMMPfam hit to PF00132, Bacterial transferase hexapeptide (three rep, score 15
471473000926	HMMPfam hit to PF00132, Bacterial transferase hexapeptide (three rep, score 18
471473000927	HMMPfam hit to PF00132, Bacterial transferase hexapeptide (three rep, score 0.69
471473000928	HMMPfam hit to PF00676, Dehydrogenase E1 component,score 6.6e-72
471473000929	HMMPfam hit to PF02779, Transketolase, pyridine binding domai, score 3.7e-73
471473000930	HMMPfam hit to PF02780, Transketolase, C-terminal domain, score 1.9e-55
471473000931	HMMPfam hit to PF00364, Biotin-requiring enzyme,score 1.6e-14
471473000932	HMMPfam hit to PF02817, e3 binding domain, score 5.9e-19
471473000933	HMMPfam hit to PF00198, 2-oxoacid dehydrogenases acyltransferas, score 3.1e-113
471473000934	HMMPfam hit to PF00343, Carbohydrate phosphorylase,score 0
471473000935	PS00102 Phosphorylase pyridoxal-phosphate attachment site.
471473000936	2 probable transmembrane helices predicted for CTL0500A by TMHMM2.0 at aa 51-73 and 77-99
471473000937	HMMPfam hit to PF08299, Bacterial dnaA protein helix-turn-helix, score 2.1e-24
471473000938	HMMPfam hit to PF00308, Bacterial dnaA protein,score 6.2e-40
471473000939	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000940	HMMPfam hit to PF02096, 60Kd inner membrane protein,score 1.9e-114
471473000941	5 probable transmembrane helices predicted for CTL0503 by TMHMM2.0 at aa 7-26, 566-588, 633-655, 686-708 and 734-756
471473000942	PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
471473000943	HMMPfam hit to PF01790, Prolipoprotein diacylglyceryl transferase, score 2.4e-91
471473000944	7 probable transmembrane helices predicted for CTL0504 by TMHMM2.0 at aa 20-42, 62-84, 94-116,129-151,184-203, 210-232 and 247-269
471473000945	PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
471473000946	6 probable transmembrane helices predicted for CTL0506 by TMHMM2.0 at aa 4-25, 32-54, 69-91,112-134,158-180 and 208-230
471473000947	HMMPfam hit to PF02517, CAAX amino terminal protease family, score 1.1e-30
471473000948	HMMPfam hit to PF03819, MazG nucleotide pyrophosphohydrolase domain, score 4.7e-26
471473000949	HMMPfam hit to PF01595, Domain of unknown function DUF21, score 2.7e-38
471473000950	3 probable transmembrane helices predicted for CTL0508 by TMHMM2.0 at aa 5-27, 52-74 and 81-103
471473000951	HMMPfam hit to PF00571, CBS domain pair, score 7.5e-09
471473000952	HMMPfam hit to PF03471, Transporter associated domain, score 1.3e-22
471473000953	3 probable transmembrane helices predicted for CTL0509 by TMHMM2.0 at aa 7-29, 95-114 and 135-157
471473000954	HMMPfam hit to PF01595, Domain of unknown function DUF21, score 8.1e-47
471473000955	HMMPfam hit to PF00571, CBS domain pair, score 5.1e-11
471473000956	HMMPfam hit to PF03471, Transporter associated domain, score 2.7e-15
471473000957	HMMPfam hit to PF01041, DegT/DnrJ/EryC1/StrS aminotransferase, score 0.00014
471473000958	HMMPfam hit to PF00266, Aminotransferase class-V,score 2.2e-31
471473000959	HMMPfam hit to PF00481, Protein phosphatase 2C,score 0.0001
471473000960	HMMPfam hit to PF00929, Exonuclease, score 5e-54
471473000961	PS00402 Binding-protein-dependent transport systems inner membrane comp. sign.
471473000962	HMMPfam hit to PF02642, Uncharacterized ACR,COG2107,score 2.5e-180
471473000963	HMMPfam hit to PF00005, ABC transporter, score 1.9e-51
471473000964	PS00211 ABC transporters family signature.
471473000965	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000966	HMMPfam hit to PF00664, ABC transporter transmembrane region, score 9.3e-06
471473000967	5 probable transmembrane helices predicted for CTL0516 by TMHMM2.0 at aa 20-42, 125-147, 195-217, 221-243 and 312-334
471473000968	PS00070 Aldehyde dehydrogenases cysteine active site.
471473000969	HMMPfam hit to PF03255, Acetyl co-enzyme A carboxylase carboxyltrans, score 1.4e-93
471473000970	HMMPfam hit to PF00216, Bacterial DNA-binding protein, score 2.7e-33
471473000971	HMMPfam hit to PF01520, N-acetylmuramoyl-L-alanine amidase, score 9.3e-89
471473000972	HMMPfam hit to PF02875, Mur ligase family,glutamate ligase doma, score 1.4e-28
471473000973	HMMPfam hit to PF08245, Mur ligase middle domain,score 6.5e-75
471473000974	PS01011 Folylpolyglutamate synthase signature 1.
471473000975	HMMPfam hit to PF01225, Mur ligase family,catalytic domain, score 6.6e-14
471473000976	HMMPfam hit to PF00905, Penicillin binding protein transpeptid, score 6.2e-48
471473000977	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000978	HMMPfam hit to PF03717, Penicillin-binding Protein dimerisatio, score 2.5e-29
471473000979	1 probable transmembrane helix predicted for CTL0522 by TMHMM2.0 at aa 7-26
471473000980	HMMPfam hit to PF01795, MraW methylase family,score 1.8e-172
471473000981	HMMPfam hit to PF00308, Bacterial dnaA protein,score 1.6e-101
471473000982	PS00017 ATP/GTP-binding site motif A (P-loop).
471473000983	HMMPfam hit to PF08299, Bacterial dnaA protein helix-turn-helix, score 1.1e-26
471473000984	HMMPfam hit to PF04519, Protein of unknown function,DUF583, score 2.7e-45
471473000985	HMMPfam hit to PF03116, NQR2, RnfD, RnfE family,score 0
471473000986	8 probable transmembrane helices predicted for CTL0530 by TMHMM2.0 at aa 57-79, 120-142, 155-177,356-378,385-407, 417-436, 449-468 and 473-495
471473000987	1 probable transmembrane helix predicted for CTL0531 by TMHMM2.0 at aa 13-35
471473000988	HMMPfam hit to PF04205, FMN-binding domain, score 4.9e-24
471473000989	HMMPfam hit to PF02508, Rnf-Nqr subunit, membrane protein, score 2.3e-94
471473000990	6 probable transmembrane helices predicted for CTL0532 by TMHMM2.0 at aa 13-35, 40-62, 69-86,92-114,141-163 and 183-205
471473000991	HMMPfam hit to PF02508, Rnf-Nqr subunit, membrane protein, score 7.3e-111
471473000992	6 probable transmembrane helices predicted for CTL0533 by TMHMM2.0 at aa 13-35, 48-70, 90-112,119-141,151-173 and 186-208
471473000993	HMMPfam hit to PF01597, Glycine cleavage H-protein,score 3.5e-12
471473000994	HMMPfam hit to PF00364, Biotin-requiring enzyme,score 0.00088
471473000995	PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site.
471473000996	HMMPfam hit to PF00614, Phospholipase D Active site motif, score 0.062
471473000997	HMMPfam hit to PF00614, Phospholipase D Active site motif, score 0.25
471473000998	1 probable transmembrane helix predicted for CTL0536 by TMHMM2.0 at aa 9-28
471473000999	HMMPfam hit to PF03099, Biotin/lipoate A/B protein ligase famil, score 2.3e-19
471473001000	HMMPfam hit to PF02861, Clp amino terminal domain,score 2e-18
471473001001	PS00307 Legume lectins beta-chain signature.
471473001002	HMMPfam hit to PF02861, Clp amino terminal domain,score 5.5e-18
471473001003	HMMPfam hit to PF00004, ATPase family associated with various cellul, score 4.1e-10
471473001004	PS00017 ATP/GTP-binding site motif A (P-loop).
471473001005	HMMPfam hit to PF02151, UvrB/uvrC motif, score 2.5e-10
471473001006	HMMPfam hit to PF07724, ATPase family associated with various cellul, score 4.8e-97
471473001007	HMMPfam hit to PF07728, ATPase family associated with various cellul, score 0.00038
471473001008	PS00017 ATP/GTP-binding site motif A (P-loop).
471473001009	HMMPfam hit to PF03054, tRNA methyl transferase,score 2.9e-224
471473001010	HMMPfam hit to PF01171, PP-loop family, score 0.016
471473001011	HMMPfam hit to PF04156, IncA protein, score 0.00057
471473001012	4 probable transmembrane helices predicted for CTL0540 by TMHMM2.0 at aa 36-58, 63-85, 240-262 and 266-288
471473001013	PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
471473001014	2 probable transmembrane helices predicted for CTL0541 by TMHMM2.0 at aa 10-32 and 338-360
471473001015	HMMPfam hit to PF00359,Phosphoenolpyruvate-dependent sugar phosph, score 0.00029
471473001016	PS00372 PTS EIIA domains phosphorylation site signature 2.
471473001017	HMMPfam hit to PF00359,Phosphoenolpyruvate-dependent sugar phosph, score 9.3e-16
471473001018	PS00372 PTS EIIA domains phosphorylation site signature 2.
471473001019	HMMPfam hit to PF00692, dUTPase, score 8.8e-26
471473001020	HMMPfam hit to PF02777, Iron/manganese superoxide dismutases, C-term, score 5.9e-54
471473001021	PS00088 Manganese and iron superoxide dismutases signature.
471473001022	HMMPfam hit to PF00081, Iron/manganese superoxide dismutases, alpha-, score 3.8e-46
471473001023	HMMPfam hit to PF02880,Phosphoglucomutase/phosphomannomutase, al, score 0.00069
471473001024	HMMPfam hit to PF02879,Phosphoglucomutase/phosphomannomutase, al, score 0.0042
471473001025	HMMPfam hit to PF02878,Phosphoglucomutase/phosphomannomutase, al, score 1.1e-59
471473001026	PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature.
471473001027	HMMPfam hit to PF00636, RNase3 domain, score 4.6e-43
471473001028	PS00517 Ribonuclease III family signature.
471473001029	HMMPfam hit to PF00035, Double-stranded RNA binding motif, score 4.2e-15
471473001030	PS00017 ATP/GTP-binding site motif A (P-loop).
471473001031	HMMPfam hit to PF01379, Porphobilinogen deaminase,dipyrometha, score 4.1e-17
471473001032	The sequence has been checked and is believed to be correct.putative integral membrane protein (pseudogene)
471473001033	2 probable transmembrane helices predicted for CTL0552A by TMHMM2.0 at aa 30-52 and 65-87
471473001034	HMMPfam hit to PF00069, Protein kinase domain,score 2.3e-44
471473001035	PS00108 Serine/Threonine protein kinases active-site signature.
471473001036	PS00107 Protein kinases ATP-binding region signature.
471473001037	HMMPfam hit to PF08264, Anticodon-binding domain,score 1.4e-24
471473001038	HMMPfam hit to PF00133, tRNA synthetases class I (I,L, M and V), score 9.5e-213
471473001039	PS00178 Aminoacyl-transfer RNA synthetases class-I signature.
471473001040	4 probable transmembrane helices predicted for CTL0556 by TMHMM2.0 at aa 10-32, 45-67, 77-96 and 117-139
471473001041	HMMPfam hit to PF00137, ATP synthase subunit C,score 0.00038
471473001042	PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
471473001043	HMMPfam hit to PF01496, V-type ATPase 116kDa subunit family, score 1.2e-10
471473001044	7 probable transmembrane helices predicted for CTL0557 by TMHMM2.0 at aa 317-339, 360-382,457-479,486-508, 518-540, 561-583 and 593-615
471473001045	HMMPfam hit to PF01813, ATP synthase subunit D,score 6.2e-79
471473001046	HMMPfam hit to PF00006, ATP synthase alpha/beta family, nucleot, score 1e-65
471473001047	HMMPfam hit to PF02874, ATP synthase alpha/beta family, beta-ba, score 2.4e-14
471473001048	HMMPfam hit to PF00306, ATP synthase alpha/beta chain, C termin, score 2.7e-09
471473001049	HMMPfam hit to PF00006, ATP synthase alpha/beta family, nucleot, score 3.5e-89
471473001050	PS00152 ATP synthase alpha and beta subunits signature.
471473001051	PS00017 ATP/GTP-binding site motif A (P-loop).
471473001052	HMMPfam hit to PF02874, ATP synthase alpha/beta family, beta-ba, score 2e-12
471473001053	PS00017 ATP/GTP-binding site motif A (P-loop).
471473001054	HMMPfam hit to PF01991, ATP synthase (E/31 kDa) subunit, score 0.00014
471473001055	PS00652 TNFR/NGFR family cysteine-rich region signature.
471473001056	HMMPfam hit to PF00923, Transaldolase, score 7.8e-121
471473001057	PS00958 Transaldolase active site.
471473001058	PS01054 Transaldolase signature 1.
471473001059	HMMPfam hit to PF04998, RNA polymerase Rpb1,domain,score 1.2e-122
471473001060	HMMPfam hit to PF05000, RNA polymerase Rpb1,domain,score 6.9e-25
471473001061	HMMPfam hit to PF04983, RNA polymerase Rpb1,domain,score 1.5e-39
471473001062	HMMPfam hit to PF00623, RNA polymerase Rpb1,domain,score 2.4e-86
471473001063	HMMPfam hit to PF04997, RNA polymerase Rpb1,domain,score 1.4e-165
471473001064	HMMPfam hit to PF04560, RNA polymerase Rpb2,domain,score 6.4e-46
471473001065	HMMPfam hit to PF00562, RNA polymerase Rpb2,domain,score 2.1e-181
471473001066	PS00017 ATP/GTP-binding site motif A (P-loop).
471473001067	PS01166 RNA polymerases beta chain signature.
471473001068	HMMPfam hit to PF04565, RNA polymerase Rpb2,domain,score 5.9e-43
471473001069	HMMPfam hit to PF04563, RNA polymerase beta subunit,score 8.6e-30
471473001070	HMMPfam hit to PF00542, Ribosomal protein L7/L12 C-terminal dom, score 4e-39
471473001071	HMMPfam hit to PF00687, Ribosomal protein L1p/L10e family, score 2.7e-108
471473001072	PS00359 Ribosomal protein L11 signature.
471473001073	HMMPfam hit to PF00298, Ribosomal protein L11, RNA binding do, score 5.9e-31
471473001074	HMMPfam hit to PF03946, Ribosomal protein L11,N-terminal dom, score 5.3e-31
471473001075	HMMPfam hit to PF00467, KOW motif, score 5.2e-08
471473001076	HMMPfam hit to PF02357, Transcription termination factor nusG, score 2.8e-37
471473001077	1 probable transmembrane helix predicted for CTL0573 by TMHMM2.0 at aa 47-66
471473001078	HMMPfam hit to PF03143, Elongation factor Tu C-terminal domain, score 2e-57
471473001079	HMMPfam hit to PF03144, Elongation factor Tu domain,score 2.7e-25
471473001080	HMMPfam hit to PF00009, Elongation factor Tu GTP binding domain, score 4.7e-96
471473001081	PS00301 GTP-binding elongation factors signature.
471473001082	PS00017 ATP/GTP-binding site motif A (P-loop).
471473001083	HMMPfam hit to PF00575, S1 RNA binding domain,score 1.2e-05
471473001084	HMMPfam hit to PF01176, Translation initiation factor 1A / IF-1, score 3.6e-26
471473001085	3 probable transmembrane helices predicted for CTL0576 by TMHMM2.0 at aa 76-93, 97-119 and 150-172
471473001086	HMMPfam hit to PF02657, Fe-S metabolism associated domain, score 1.2e-67
471473001087	The sequence has been checked and is believed to be correct.conserved hypothetical protein (pseudogene)
471473001088	HMMPfam hit to PF05095, Protein of unknown function (DUF687), score 0
471473001089	HMMPfam hit to PF00697,N-(5'phosphoribosyl)anthranilate (PRA) isome, score 2.6e-26
471473001090	HMMPfam hit to PF00121, Triosephosphate isomerase,score 3e-141
471473001091	PS00171 Triosephosphate isomerase active site.
471473001092	HMMPfam hit to PF01336, OB-fold nucleic acid binding domain, score 8.3e-08
471473001093	HMMPfam hit to PF02601, Exonuclease VII, large subunit, score 3.7e-152
471473001094	HMMPfam hit to PF02609, Exonuclease VII small subunit, score 3.1e-08
471473001095	PS00801 Transketolase signature 1.
471473001096	HMMPfam hit to PF02779, Transketolase, pyridine binding domai, score 3.8e-50
471473001097	HMMPfam hit to PF02780, Transketolase, C-terminal domain, score 5.6e-44
471473001098	HMMPfam hit to PF00224, Pyruvate kinase, barrel domain, score 1.1e-137
471473001099	HMMPfam hit to PF02887, Pyruvate kinase, alpha/beta domain, score 5.9e-13
471473001100	HMMPfam hit to PF00005, ABC transporter, score 1.1e-08
471473001101	PS00017 ATP/GTP-binding site motif A (P-loop).
471473001102	PS00017 ATP/GTP-binding site motif A (P-loop).
471473001103	HMMPfam hit to PF00005, ABC transporter, score 7.8e-13
471473001104	PS00017 ATP/GTP-binding site motif A (P-loop).
471473001105	PS00017 ATP/GTP-binding site motif A (P-loop).
471473001106	HMMPfam hit to PF00004, ATPase family associated with various cellul, score 5.5e-07
471473001107	PS00017 ATP/GTP-binding site motif A (P-loop).
471473001108	HMMPfam hit to PF02575, Uncharacterised BCR, YbaB family COG0718, score 1.6e-38
471473001109	HMMPfam hit to PF02896, PEP-utilising enzyme, TIM barrel doma, score 7.9e-37
471473001110	HMMPfam hit to PF00391, PEP-utilising enzyme,mobile domain, score 2.5e-20
471473001111	HMMPfam hit to PF05524, PEP-utilising enzyme,N-terminal, score 1.3e-13
471473001112	HMMPfam hit to PF00381, PTS HPr component phosphorylation site, score 1.2e-16
471473001113	PS00589 PTS HPR component serine phosphorylation site signature.
471473001114	9 probable transmembrane helices predicted for CTL0593 by TMHMM2.0 at aa 42-64, 76-93, 254-276,283-302,317-339, 346-368, 381-403, 416-438 and 474-496
471473001115	HMMPfam hit to PF03772, Competence protein, score 4.5e-59
471473001116	HMMPfam hit to PF02780, Transketolase, C-terminal domain, score 2.8e-56
471473001117	HMMPfam hit to PF02779, Transketolase, pyridine binding domai, score 8e-74
471473001118	HMMPfam hit to PF00676, Dehydrogenase E1 component,score 1.4e-29
471473001119	PS00017 ATP/GTP-binding site motif A (P-loop).
471473001120	HMMPfam hit to PF01556, DnaJ C terminal region,score 9.6e-54
471473001121	HMMPfam hit to PF00684, DnaJ central domain (4 repeats), score 1.6e-23
471473001122	HMMPfam hit to PF00226, DnaJ domain, score 4.6e-40
471473001123	PS00636 Nt-dnaJ domain signature.
471473001124	HMMPfam hit to PF01165, Ribosomal protein S21,score 9e-11
471473001125	HMMPfam hit to PF00814, Glycoprotease family, score 3.4e-05
471473001126	HMMPfam hit to PF02190, ATP-dependent protease La (LON) domain, score 1.6e-16
471473001127	HMMPfam hit to PF00004, ATPase family associated with various cellul, score 2.2e-48
471473001128	HMMPfam hit to PF07728, ATPase family associated with various cellul, score 3.2e-05
471473001129	PS00017 ATP/GTP-binding site motif A (P-loop).
471473001130	HMMPfam hit to PF05362, Lon protease (S16) C-terminal proteolytic do, score 1.3e-107
471473001131	PS01046 ATP-dependent serine proteases, lon family,serine active site.
471473001132	2 probable transmembrane helices predicted for CTL0599 by TMHMM2.0 at aa 31-53 and 57-79
471473001133	HMMPfam hit to PF00753, Metallo-beta-lactamase superfamily, score 3.5e-10
471473001134	HMMPfam hit to PF02899, Phage integrase, N-terminal SAM-like, score 8.7e-05
471473001135	HMMPfam hit to PF00589, Phage integrase family,score 1.9e-44
471473001136	HMMPfam hit to PF00005, ABC transporter, score 1.2e-32
471473001137	PS00017 ATP/GTP-binding site motif A (P-loop).
471473001138	HMMPfam hit to PF00005, ABC transporter, score 9.9e-37
471473001139	PS00017 ATP/GTP-binding site motif A (P-loop).
471473001140	HMMPfam hit to PF02545, Maf-like protein, score 1.4e-107
471473001141	PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
471473001142	2 probable transmembrane helices predicted for CTL0606 by TMHMM2.0 at aa 3-25 and 57-79
471473001143	HMMPfam hit to PF03840, Preprotein translocase SecG subunit, score 6.9e-24
471473001144	HMMPfam hit to PF01327, Polypeptide deformylase,score 6.2e-51
471473001145	HMMPfam hit to PF00398, Ribosomal RNA adenine dimethylase, score 5.6e-56
471473001146	PS01131 Ribosomal RNA adenine dimethylases signature.
471473001147	1 probable transmembrane helix predicted for CTL0609 by TMHMM2.0 at aa 7-29
471473001148	PS00336 Beta-lactamase class-C active site.
471473001149	HMMPfam hit to PF03190, Protein of unknown function,DUF255, score 7.6e-48
471473001150	2 probable transmembrane helices predicted for CTL0611A by TMHMM2.0 at aa 37-59 and 64-86
471473001151	The sequence has been checked and is believed to be correct.putative inner membrane protein (pseudogene)
471473001152	2 probable transmembrane helices predicted for CTL0612 by TMHMM2.0 at aa 45-67 and 77-99
471473001153	HMMPfam hit to PF02632, BioY family, score 1.5e-70
471473001154	5 probable transmembrane helices predicted for CTL0613 by TMHMM2.0 at aa 22-44, 51-73, 88-113, 125-147 and 162-184
471473001155	PS00011 Vitamin K-dependent carboxylation domain.
471473001156	HMMPfam hit to PF00701, Dihydrodipicolinate synthetase family, score 2.2e-15
471473001157	PS00665 Dihydrodipicolinate synthetase signature 1.
471473001158	HMMPfam hit to PF00696, Amino acid kinase family,score 1.8e-54
471473001159	PS00017 ATP/GTP-binding site motif A (P-loop).
471473001160	PS00324 Aspartokinase signature.
471473001161	HMMPfam hit to PF02774, Semialdehyde dehydrogenase,dimerisat, score 7.1e-20
471473001162	HMMPfam hit to PF01118, Semialdehyde dehydrogenase,NAD bindi, score 7.8e-36
471473001163	HMMPfam hit to PF05173, Dihydrodipicolinate reductase, C-terminus, score 1.8e-57
471473001164	HMMPfam hit to PF01113, Dihydrodipicolinate reductase, N-terminus, score 1.1e-29
471473001165	10 probable transmembrane helices predicted for CTL0619 by TMHMM2.0 at aa 55-77, 83-105, 125-147,162-179,212-234, 238-260, 338-360, 370-392, 469-491 and 495-517
471473001166	HMMPfam hit to PF00275, EPSP synthase (3-phosphoshikimate 1-car, score 1.2e-75
471473001167	PS00885 EPSP synthase signature 2.
471473001168	PS00017 ATP/GTP-binding site motif A (P-loop).
471473001169	HMMPfam hit to PF01202, Shikimate kinase, score 2.3e-32
471473001170	HMMPfam hit to PF01264, Chorismate synthase, score 3e-126
471473001171	PS00787 Chorismate synthase signature 1.
471473001172	PS00788 Chorismate synthase signature 2.
471473001173	HMMPfam hit to PF01761, 3-dehydroquinate synthase,score 1.5e-124
471473001174	HMMPfam hit to PF01487, Type I 3-dehydroquinase,score 6.7e-77
471473001175	HMMPfam hit to PF08501, Shikimate dehydrogenase substrate bind, score 2.1e-16
471473001176	HMMPfam hit to PF01488, Shikimate / quinate 5-dehydrogenase, score 7.2e-08
471473001177	HMMPfam hit to PF04966, Carbohydrate-selective porin, OprB family, score 2e-31
471473001178	The sequence has been checked and is believed to be correct.pyruvoyl-dependent arginine decarboxylase (pseudogene)
471473001179	HMMPfam hit to PF01862, Pyruvoyl-dependent arginine decarboxylase (P, score 1.7e-84
471473001180	13 probable transmembrane helices predicted for CTL0628 by TMHMM2.0 at aa 11-33, 48-70, 90-112,127-149,156-178, 209-228, 241-263, 293-315, 335-357,367-389,402-419, 423-445 and 458-477
471473001181	HMMPfam hit to PF00324, Amino acid permease, score 3.2e-07
471473001182	PS00095 C-5 cytosine-specific DNA methylases C-terminal signature.
471473001183	HMMPfam hit to PF01266, FAD dependent oxidoreductase, score 6.1e-54
471473001184	HMMPfam hit to PF02866, lactate/malate dehydrogenase, alpha/beta C-t, score 1.3e-28
471473001185	HMMPfam hit to PF00056, lactate/malate dehydrogenase, NAD binding do, score 3e-36
471473001186	HMMPfam hit to PF00342, Phosphoglucose isomerase,score 1.6e-116
471473001187	PS00017 ATP/GTP-binding site motif A (P-loop).
471473001188	HMMPfam hit to PF01926, GTPase of unknown function,score 1.2e-37
471473001189	PS00017 ATP/GTP-binding site motif A (P-loop).
471473001190	HMMPfam hit to PF00753, Metallo-beta-lactamase superfamily, score 7.9e-15
471473001191	PS00022 EGF-like domain signature 1.
471473001192	HMMPfam hit to PF00497, Bacterial extracellular solute-binding prot, score 1e-32
471473001193	HMMPfam hit to PF00793, DAHP synthetase I family,score 3.1e-121
471473001194	2 probable transmembrane helices predicted for CTL0639 by TMHMM2.0 at aa 106-128 and 133-155
471473001195	HMMPfam hit to PF01230, HIT domain, score 7.9e-35
471473001196	PS00892 HIT family signature.
471473001197	HMMPfam hit to PF03690, Uncharacterised protein family (UPF0160), score 1.1e-180
471473001198	HMMPfam hit to PF02594, Uncharacterised ACR, YggU family COG1872, score 1.6e-32
471473001199	1 probable transmembrane helix predicted for CTL0645 by TMHMM2.0 at aa 7-24
471473001200	HMMPfam hit to PF06727, Protein of unknown function (DUF1207), score 6.7e-295
471473001201	HMMPfam hit to PF00155, Aminotransferase class I and II, score 1.5e-32
471473001202	PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site.
471473001203	1 probable transmembrane helix predicted for CTL0647 by TMHMM2.0 at aa 7-29
471473001204	HMMPfam hit to PF04392, ABC transporter substrate binding protei, score 3.6e-132
471473001205	HMMPfam hit to PF00587, tRNA synthetase class II core domain (, score 1e-51
471473001206	PS00179 Aminoacyl-transfer RNA synthetases class-II signature 1.
471473001207	PS00017 ATP/GTP-binding site motif A (P-loop).
471473001208	HMMPfam hit to PF04073, YbaK / prolyl-tRNA synthetases associa, score 7.6e-05
471473001209	HMMPfam hit to PF03129, Anticodon binding domain,score 2.9e-20
471473001210	HMMPfam hit to PF01628, HrcA protein C terminal domain, score 3.3e-76
471473001211	HMMPfam hit to PF01025, GrpE, score 5.3e-72
471473001212	PS01071 grpE protein signature.
471473001213	HMMPfam hit to PF00012, Hsp70 protein, score 0
471473001214	PS00297 Heat shock hsp70 proteins family signature 1.
471473001215	PS00329 Heat shock hsp70 proteins family signature 2.
471473001216	PS01036 Heat shock hsp70 proteins family signature 3.
471473001217	HMMPfam hit to PF00773, RNB-like protein, score 2.1e-123
471473001218	PS01175 Ribonuclease II family signature.
471473001219	HMMPfam hit to PF02591, Uncharacterized ACR,COG1579,score 2.2e-129
471473001220	HMMPfam hit to PF00571, CBS domain pair, score 3.6e-16
471473001221	HMMPfam hit to PF01380, SIS domain, score 1.2e-19
471473001222	HMMPfam hit to PF00198, 2-oxoacid dehydrogenases acyltransferas, score 2.6e-110
471473001223	HMMPfam hit to PF02817, e3 binding domain, score 1.5e-13
471473001224	HMMPfam hit to PF00364, Biotin-requiring enzyme,score 3.1e-18
471473001225	PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site.
471473001226	HMMPfam hit to PF00375, Sodium:dicarboxylate symporter family, score 8.5e-107
471473001227	8 probable transmembrane helices predicted for CTL0658 by TMHMM2.0 at aa 7-21, 36-58, 71-93,136-158,179-198, 213-235, 312-334 and 344-366
471473001228	HMMPfam hit to PF02606, Tetraacyldisaccharide-1-P 4'-kinase, score 4.3e-222
471473001229	PS00136 Serine proteases, subtilase family,aspartic acid active site.
471473001230	HMMPfam hit to PF00588, SpoU rRNA Methylase family,score 6.1e-45
471473001231	HMMPfam hit to PF08032, RNA 2'-O ribose methyltransferase subs, score 7.7e-13
471473001232	HMMPfam hit to PF00677, Lumazine binding domain,score 5.4e-26
471473001233	HMMPfam hit to PF00677, Lumazine binding domain,score 2.7e-13
471473001234	HMMPfam hit to PF03477, ATP cone domain, score 1.1e-29
471473001235	HMMPfam hit to PF01258, Prokaryotic dksA/traR C4-type zinc finge, score 1.7e-07
471473001236	5 probable transmembrane helices predicted for CTL0665 by TMHMM2.0 at aa 5-27, 40-62, 66-88, 101-123 and 138-160
471473001237	HMMPfam hit to PF01252, Signal peptidase (SPase) II,score 5.5e-16
471473001238	11 probable transmembrane helices predicted for CTL0666 by TMHMM2.0 at aa 15-32, 70-92, 102-124,151-173,186-203, 210-232, 242-264, 303-325, 350-372,385-402 and 407-429
471473001239	HMMPfam hit to PF01235, Sodium:alanine symporter family, score 1.2e-16
471473001240	HMMPfam hit to PF01743, Poly A polymerase family,score 7.9e-72
471473001241	6 probable transmembrane helices predicted for CTL0668 by TMHMM2.0 at aa 10-32, 39-61, 65-82,95-117,137-156 and 168-190
471473001242	HMMPfam hit to PF07578, Lipid A Biosynthesis N-terminal domain, score 9.7e-38
471473001243	HMMPfam hit to PF07578, Lipid A Biosynthesis N-terminal domain, score 6.6e-39
471473001244	HMMPfam hit to PF02684, Lipid-A-disaccharide synthetase, score 2e-227
471473001245	1 probable transmembrane helix predicted for CTL0669 by TMHMM2.0 at aa 24-46
471473001246	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 3.5
471473001247	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.01
471473001248	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.0052
471473001249	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.26
471473001250	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.0052
471473001251	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.11
471473001252	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.13
471473001253	HMMPfam hit to PF07548, Chlamydia polymorphic membrane protei, score 1.4e-55
471473001254	HMMPfam hit to PF03797, Autotransporter beta-domain,score 1.2e-40
471473001255	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.3
471473001256	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.34
471473001257	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 2.2
471473001258	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 1.4
471473001259	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.066
471473001260	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 2.1
471473001261	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 44
471473001262	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 9.5
471473001263	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.39
471473001264	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 4.5
471473001265	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.42
471473001266	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 8
471473001267	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.021
471473001268	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.98
471473001269	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 4.6
471473001270	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.65
471473001271	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.034
471473001272	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 12
471473001273	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 4.1
471473001274	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 44
471473001275	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 13
471473001276	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 2
471473001277	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.74
471473001278	HMMPfam hit to PF07548, Chlamydia polymorphic membrane protei, score 1.7e-54
471473001279	HMMPfam hit to PF03797, Autotransporter beta-domain,score 4.3e-40
471473001280	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 42
471473001281	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 9.7
471473001282	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.33
471473001283	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 46
471473001284	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.95
471473001285	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 10
471473001286	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.041
471473001287	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.04
471473001288	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.039
471473001289	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 2
471473001290	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 36
471473001291	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.31
471473001292	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.19
471473001293	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.62
471473001294	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 9.5
471473001295	HMMPfam hit to PF02415, Chlamydia polymorphic membrane protei, score 0.35
471473001296	HMMPfam hit to PF07548, Chlamydia polymorphic membrane protei, score 1.5e-51
471473001297	HMMPfam hit to PF03797, Autotransporter beta-domain,score 9e-40
471473001298	HMMPfam hit to PF01297, Periplasmic solute binding protein family, score 8.4e-116
471473001299	HMMPfam hit to PF00005, ABC transporter, score 8.4e-42
471473001300	PS00017 ATP/GTP-binding site motif A (P-loop).
471473001301	PS00211 ABC transporters family signature.
471473001302	HMMPfam hit to PF00950, ABC 3 transport family,score 1.1e-57
471473001303	8 probable transmembrane helices predicted for CTL0674 by TMHMM2.0 at aa 15-37, 44-66, 70-92,101-123,143-165, 186-208, 228-250 and 255-277
471473001304	HMMPfam hit to PF01926, GTPase of unknown function,score 1.8e-39
471473001305	PS00017 ATP/GTP-binding site motif A (P-loop).
471473001306	HMMPfam hit to PF01018, GTP1/OBG, score 1.4e-66
471473001307	HMMPfam hit to PF01016, Ribosomal L27 protein,score 1.4e-40
471473001308	HMMPfam hit to PF00829, Ribosomal prokaryotic L21 protein, score 1.3e-43
471473001309	2 probable transmembrane helices predicted for CTL0678 by TMHMM2.0 at aa 23-45 and 78-100
471473001310	HMMPfam hit to PF04367, Protein of unknown function (DUF502), score 4.3e-89
471473001311	HMMPfam hit to PF02130, Uncharacterized protein family UPF0054, score 0.0012
471473001312	3 probable transmembrane helices predicted for CTL0682 by TMHMM2.0 at aa 2-19, 42-64 and 71-93
471473001313	HMMPfam hit to PF00571, CBS domain pair, score 6.7e-20
471473001314	HMMPfam hit to PF03471, Transporter associated domain, score 7.8e-22
471473001315	HMMPfam hit to PF01740, STAS domain, score 6e-30
471473001316	HMMPfam hit to PF04055, Radical SAM superfamily,score 3.3e-16
471473001317	HMMPfam hit to PF02621, Uncharacterized ACR,COG1427,score 4.8e-161
471473001318	HMMPfam hit to PF01209, ubiE/COQ5 methyltransferase family, score 2.3e-15
471473001319	HMMPfam hit to PF08241, Methyltransferase domain,score 1.1e-22
471473001320	HMMPfam hit to PF08242, Methyltransferase domain,score 1.7e-09
471473001321	HMMPfam hit to PF03682, Uncharacterised protein family (UPF0158), score 9e-120
471473001322	HMMPfam hit to PF01678, Diaminopimelate epimerase,score 1.5e-09
471473001323	HMMPfam hit to PF01678, Diaminopimelate epimerase,score 2.5e-05
471473001324	PS01326 Diaminopimelate epimerase signature.
471473001325	HMMPfam hit to PF00574, Clp protease, score 1.2e-89
471473001326	PS00382 Endopeptidase Clp histidine active site.
471473001327	HMMPfam hit to PF00464, Serine hydroxymethyltransferase, score 2.9e-138
471473001328	PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site.
471473001329	HMMPfam hit to PF02602, Uroporphyrinogen-III synthase HemD, score 2.5e-61
471473001330	HMMPfam hit to PF02542, YgbB family, score 2.6e-89
471473001331	HMMPfam hit to PF00175, Oxidoreductase NAD-binding domain, score 1.2e-13
471473001332	HMMPfam hit to PF00667, FAD binding domain, score 1.7e-07
471473001333	HMMPfam hit to PF00338, Ribosomal protein S10p/S20e,score 3e-58
471473001334	PS00361 Ribosomal protein S10 signature.
471473001335	HMMPfam hit to PF00679, Elongation factor G C-terminus, score 1.8e-44
471473001336	HMMPfam hit to PF03764, Elongation factor G, domain IV, score 6.9e-66
471473001337	HMMPfam hit to PF03144, Elongation factor Tu domain,score 2.1e-18
471473001338	HMMPfam hit to PF00009, Elongation factor Tu GTP binding domain, score 1.2e-107
471473001339	PS00301 GTP-binding elongation factors signature.
471473001340	PS00017 ATP/GTP-binding site motif A (P-loop).
471473001341	HMMPfam hit to PF00177, Ribosomal protein S7p/S5e,score 1.5e-95
471473001342	PS00052 Ribosomal protein S7 signature.
471473001343	HMMPfam hit to PF00164, Ribosomal protein S12,score 5e-70
471473001344	PS00055 Ribosomal protein S12 signature.
471473001345	2 probable transmembrane helices predicted for CTL0699 by TMHMM2.0 at aa 31-53 and 63-85
471473001346	HMMPfam hit to PF00595, PDZ domain (Also known as DHR or GLGF), score 2e-13
471473001347	HMMPfam hit to PF03572, Peptidase family S41, score 2.4e-57
471473001348	HMMPfam hit to PF05745, Chlamydia 15 kDa cysteine-rich outer membran, score 9.3e-81
471473001349	2 probable transmembrane helices predicted for CTL0701 by TMHMM2.0 at aa 43-65 and 69-88
471473001350	HMMPfam hit to PF01345, Domain of unknown function DUF11, score 3.5e-18
471473001351	HMMPfam hit to PF01345, Domain of unknown function DUF11, score 1.4e-17
471473001352	HMMPfam hit to PF03504, Chlamydia cysteine-rich outer membrane pro, score 1.4e-78
471473001353	1 probable transmembrane helix predicted for CTL0702 by TMHMM2.0 at aa 13-32
471473001354	HMMPfam hit to PF03503, Chlamydia cysteine-rich outer membrane pro, score 1.1e-32
471473001355	PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
471473001356	PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
471473001357	HMMPfam hit to PF00749, tRNA synthetases class I (E and Q), cata, score 3.9e-157
471473001358	PS00178 Aminoacyl-transfer RNA synthetases class-I signature.
471473001359	HMMPfam hit to PF02272, DHHA1 domain, score 1.1e-13
471473001360	HMMPfam hit to PF01368, DHH family, score 4.8e-43
471473001361	HMMPfam hit to PF02355, Protein export membrane protein, score 3.2e-97
471473001362	12 probable transmembrane helices predicted for CTL0708 by TMHMM2.0 at aa 9-31, 904-921, 923-945,955-977,998-1020, 1035-1057, 1085-1107, 1232-1251,1258-1280,1290-1309, 1340-1362 and 1367-1389
471473001363	PS00141 Eukaryotic and viral aspartyl proteases active site.
471473001364	HMMPfam hit to PF07549, SecD/SecF GG Motif, score 0.00038
471473001365	PS00037 Myb DNA-binding domain repeat signature 1.
471473001366	2 probable transmembrane helices predicted for CTL0709 by TMHMM2.0 at aa 43-65 and 69-88
471473001367	PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.
471473001368	HMMPfam hit to PF01255, Putative undecaprenyl diphosphate syntha, score 4.3e-95
471473001369	PS00962 Ribosomal protein S2 signature 1.
471473001370	PS01066 Undecaprenyl pyrophosphate synthetase family signature.
471473001371	HMMPfam hit to PF01148, Cytidylyltransferase family,score 4.3e-81
471473001372	7 probable transmembrane helices predicted for CTL0711 by TMHMM2.0 at aa 28-50, 71-90, 100-117,124-146,161-183, 203-222 and 232-251
471473001373	PS00017 ATP/GTP-binding site motif A (P-loop).
471473001374	HMMPfam hit to PF02224, Cytidylate kinase, score 3.4e-86
471473001375	HMMPfam hit to PF01553, Acyltransferase, score 7.1e-26
471473001376	HMMPfam hit to PF03485, Arginyl tRNA synthetase N terminal do, score 1.8e-20
471473001377	HMMPfam hit to PF00750, tRNA synthetases class I (R), score 9.5e-110
471473001378	PS00178 Aminoacyl-transfer RNA synthetases class-I signature.
471473001379	HMMPfam hit to PF05746, DALR anticodon binding domain, score 6.3e-37
471473001380	PS00527 Ribosomal protein S14 signature.
471473001381	HMMPfam hit to PF00275, EPSP synthase (3-phosphoshikimate 1-car, score 3.6e-118
471473001382	HMMPfam hit to PF07577, Domain of Unknown Function (DUF1547), score 2.3e-29
471473001383	HMMPfam hit to PF07577, Domain of Unknown Function (DUF1547), score 3.3e-29
471473001384	HMMPfam hit to PF01709, Domain of unknown function DUF28, score 2.7e-134
471473001385	HMMPfam hit to PF00583, Acetyltransferase (GNAT) family, score 1.5e-19
471473001386	HMMPfam hit to PF00472, Peptidyl-tRNA hydrolase domain, score 7e-75
471473001387	PS00745 Prokaryotic-type class I peptide chain release factors signature.
471473001388	HMMPfam hit to PF03462, PCRF domain, score 1.3e-52
471473001389	HMMPfam hit to PF02201, SWIB/MDM2 domain, score 1.5e-39
471473001390	1 probable transmembrane helix predicted for CTL0721 by TMHMM2.0 at aa 2-24
471473001391	HMMPfam hit to PF00149, Calcineurin-like phosphoesterase, score 5.8e-23
471473001392	HMMPfam hit to PF01128, Uncharacterized protein family UPF0007, score 2.7e-25
471473001393	HMMPfam hit to PF01416, tRNA pseudouridine synthase,score 3.1e-32
471473001394	HMMPfam hit to PF01416, tRNA pseudouridine synthase,score 3e-37
471473001395	HMMPfam hit to PF00702, haloacid dehalogenase-like hydrolase, score 4.8e-22
471473001396	PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
471473001397	HMMPfam hit to PF00512, His Kinase A (phosphoacceptor) domain, score 7.4e-20
471473001398	HMMPfam hit to PF02518, Histidine kinase-, DNA gyrase B-, and HSP90, score 5.6e-22
471473001399	HMMPfam hit to PF00072, Response regulator receiver domain, score 1.5e-35
471473001400	HMMPfam hit to PF00158, Sigma-54 interaction domain,score 7e-137
471473001401	PS00688 Sigma-54 interaction domain C-terminal part signature.
471473001402	HMMPfam hit to PF02565, Recombination protein O,score 1.4e-131
471473001403	1 probable transmembrane helix predicted for CTL0731 by TMHMM2.0 at aa 7-29
471473001404	HMMPfam hit to PF02582, Uncharacterised ACR, YagE family COG1723, score 5.4e-136
471473001405	HMMPfam hit to PF01809, Domain of unknown function DUF37, score 4e-40
471473001406	1 probable transmembrane helix predicted for CTL0735 by TMHMM2.0 at aa 24-43
471473001407	HMMPfam hit to PF01588, Putative tRNA binding domain, score 6.1e-36
471473001408	HMMPfam hit to PF03483, B3/4 domain, score 2.2e-77
471473001409	HMMPfam hit to PF03484, tRNA synthetase B5 domain,score 2.4e-24
471473001410	HMMPfam hit to PF03147, Ferredoxin-fold anticodon binding domain, score 1.5e-38
471473001411	HMMPfam hit to PF01035, 6-O-methylguanine DNA methyltransferase, score 3.8e-05
471473001412	PS00374 Methylated-DNA--protein-cysteine methyltransferase active site.
471473001413	HMMPfam hit to PF00528, Binding-protein-dependent transport syst, score 3.3e-31
471473001414	8 probable transmembrane helices predicted for CTL0739 by TMHMM2.0 at aa 20-42, 72-94, 101-123,378-400,412-434, 439-461, 490-512 and 546-568
471473001415	HMMPfam hit to PF00528, Binding-protein-dependent transport syst, score 1e-27
471473001416	5 probable transmembrane helices predicted for CTL0740 by TMHMM2.0 at aa 239-261, 268-290, 330-347,392-414 and 434-453
471473001417	HMMPfam hit to PF00496, Bacterial extracellular solute-binding prot, score 1.5e-21
471473001418	HMMPfam hit to PF01522, Polysaccharide deacetylase,score 8.5e-05
471473001419	1 probable transmembrane helix predicted for CTL0743 by TMHMM2.0 at aa 12-34
471473001420	2 probable transmembrane helices predicted for CTL0744 by TMHMM2.0 at aa 40-62 and 82-104
471473001421	2 probable transmembrane helices predicted for CTL0745 by TMHMM2.0 at aa 30-52 and 57-79
471473001422	HMMPfam hit to PF00762, Ferrochelatase, score 8.3e-145
471473001423	PS00534 Ferrochelatase signature.
471473001424	HMMPfam hit to PF03602, Conserved hypothetical protein, score 4.8e-86
471473001425	PS00092 N-6 Adenine-specific DNA methylases signature.
471473001426	HMMPfam hit to PF00149, Calcineurin-like phosphoesterase, score 2.1e-16
471473001427	HMMPfam hit to PF00483, Nucleotidyl transferase,score 1.6e-48
471473001428	PS00809 ADP-glucose pyrophosphorylase signature 2.
471473001429	HMMPfam hit to PF00006, ATP synthase alpha/beta family, nucleoti, score 4.3e-74
471473001430	PS00017 ATP/GTP-binding site motif A (P-loop).
471473001431	HMMPfam hit to PF07497, Rho termination factor,RNA-binding doma, score 4.3e-55
471473001432	HMMPfam hit to PF07498, Rho termination factor,N-terminal domai, score 1.6e-13
471473001433	HMMPfam hit to PF01121, Dephospho-CoA kinase, score 1.3e-17
471473001434	PS00017 ATP/GTP-binding site motif A (P-loop).
471473001435	HMMPfam hit to PF00476, DNA polymerase family A,score 2.3e-128
471473001436	HMMPfam hit to PF01367, 5'-3' exonuclease,C-terminal SAM fold, score 1e-52
471473001437	HMMPfam hit to PF02739, 5'-3' exonuclease,N-terminal resolvase-, score 5.5e-86
471473001438	HMMPfam hit to PF01343, Peptidase family S49, score 1.3e-31
471473001439	1 probable transmembrane helix predicted for CTL0755 by TMHMM2.0 at aa 12-34
471473001440	HMMPfam hit to PF03219, TLC ATP/ADP transporter,score 0
471473001441	12 probable transmembrane helices predicted for CTL0756 by TMHMM2.0 at aa 21-43, 58-80, 93-115,148-170,183-205, 220-242, 287-309, 329-351, 358-380,390-409,448-470 and 475-497
471473001442	HMMPfam hit to PF01066, CDP-alcohol phosphatidyltransferase, score 7.3e-27
471473001443	4 probable transmembrane helices predicted for CTL0757 by TMHMM2.0 at aa 13-35, 82-104, 116-135 and 139-156
471473001444	PS00379 CDP-alcohol phosphatidyltransferases signature.
471473001445	1 probable transmembrane helix predicted for CTL0758 by TMHMM2.0 at aa 4-21
471473001446	HMMPfam hit to PF00772, DnaB-like helicase N terminal domain, score 7.9e-37
471473001447	HMMPfam hit to PF03796, DnaB-like helicase C terminal domain, score 8.9e-123
471473001448	PS00017 ATP/GTP-binding site motif A (P-loop).
471473001449	HMMPfam hit to PF01134, Glucose inhibited division protein A, score 1.8e-242
471473001450	PS00017 ATP/GTP-binding site motif A (P-loop).
471473001451	PS01280 Glucose inhibited division protein A family signature 1.
471473001452	HMMPfam hit to PF03099, Biotin/lipoate A/B protein ligase famil, score 9.3e-10
471473001453	HMMPfam hit to PF00334, Nucleoside diphosphate kinase, score 9.4e-73
471473001454	PS00469 Nucleoside diphosphate kinases active site.
471473001455	HMMPfam hit to PF01330, RuvA N terminal domain,score 2.5e-25
471473001456	HMMPfam hit to PF02075, Crossover junction endodeoxyribonuclease Ruv, score 5.4e-67
471473001457	HMMPfam hit to PF02800, Glyceraldehyde 3-phosphate dehydrogenase, C-, score 1.7e-106
471473001458	PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site.
471473001459	HMMPfam hit to PF00044, Glyceraldehyde 3-phosphate dehydrogenase, NA, score 6.7e-88
471473001460	HMMPfam hit to PF01196, Ribosomal protein L17,score 5.8e-78
471473001461	PS01167 Ribosomal protein L17 signature.
471473001462	HMMPfam hit to PF03118, Bacterial RNA polymerase,alpha chain C, score 1.7e-34
471473001463	HMMPfam hit to PF01193, RNA polymerase Rpb3/Rpb11 dimerisation, score 2.8e-19
471473001464	HMMPfam hit to PF01000, RNA polymerase Rpb3/RpoA insert domain, score 1.7e-16
471473001465	HMMPfam hit to PF00411, Ribosomal protein S11,score 5.3e-55
471473001466	PS00054 Ribosomal protein S11 signature.
471473001467	HMMPfam hit to PF00416, Ribosomal protein S13/S18,score 2.1e-49
471473001468	PS00646 Ribosomal protein S13 signature.
471473001469	HMMPfam hit to PF00344, eubacterial secY protein,score 9.3e-212
471473001470	10 probable transmembrane helices predicted for CTL0772 by TMHMM2.0 at aa 17-39, 73-95, 120-142,157-179,192-214, 229-251, 285-307, 317-339, 384-406 and 410-429
471473001471	PS00756 Protein secY signature 2.
471473001472	PS00755 Protein secY signature 1.
471473001473	HMMPfam hit to PF01305, Ribosomal protein L15 amino terminal re, score 1.1e-62
471473001474	HMMPfam hit to PF03719, Ribosomal protein S5,C-terminal domai, score 5.5e-42
471473001475	HMMPfam hit to PF00333, Ribosomal protein S5,N-terminal domai, score 1.3e-37
471473001476	PS00585 Ribosomal protein S5 signature.
471473001477	HMMPfam hit to PF00861, Ribosomal L18p/L5e family,score 8.9e-53
471473001478	HMMPfam hit to PF00347, Ribosomal protein L6, score 3.5e-28
471473001479	PS00525 Ribosomal protein L6 signature 1.
471473001480	HMMPfam hit to PF00347, Ribosomal protein L6, score 6.6e-16
471473001481	HMMPfam hit to PF00410, Ribosomal protein S8, score 4.1e-68
471473001482	PS00053 Ribosomal protein S8 signature.
471473001483	HMMPfam hit to PF00673, ribosomal L5P family C-terminus, score 2.6e-27
471473001484	HMMPfam hit to PF00281, Ribosomal protein L5, score 3e-32
471473001485	PS00358 Ribosomal protein L5 signature.
471473001486	PS00041 Bacterial regulatory proteins, araC family signature.
471473001487	HMMPfam hit to PF00467, KOW motif, score 2.2e-08
471473001488	PS01108 Ribosomal protein L24 signature.
471473001489	HMMPfam hit to PF00238, Ribosomal protein L14p/L23e,score 6.5e-80
471473001490	PS00049 Ribosomal protein L14 signature.
471473001491	HMMPfam hit to PF00366, Ribosomal protein S17,score 1e-37
471473001492	PS00056 Ribosomal protein S17 signature.
471473001493	HMMPfam hit to PF00831, Ribosomal L29 protein,score 3.4e-15
471473001494	PS00579 Ribosomal protein L29 signature.
471473001495	HMMPfam hit to PF00252, Ribosomal protein L16,score 2.6e-82
471473001496	PS00701 Ribosomal protein L16 signature 2.
471473001497	PS00586 Ribosomal protein L16 signature 1.
471473001498	HMMPfam hit to PF00189, Ribosomal protein S3,C-terminal domai, score 5.7e-49
471473001499	PS00548 Ribosomal protein S3 signature.
471473001500	HMMPfam hit to PF07650, KH domain, score 7.2e-24
471473001501	HMMPfam hit to PF00417, Ribosomal protein S3,N-terminal domai, score 2.7e-12
471473001502	HMMPfam hit to PF00237, Ribosomal protein L22p/L17e,score 7.6e-26
471473001503	HMMPfam hit to PF00203, Ribosomal protein S19,score 2.9e-45
471473001504	PS00323 Ribosomal protein S19 signature.
471473001505	HMMPfam hit to PF03947, Ribosomal Proteins L2,C-terminal doma, score 1.3e-80
471473001506	PS00467 Ribosomal protein L2 signature.
471473001507	HMMPfam hit to PF00181, Ribosomal Proteins L2, RNA binding dom, score 1.6e-41
471473001508	HMMPfam hit to PF00276, Ribosomal protein L23,score 0.00011
471473001509	PS00215 Mitochondrial energy transfer proteins signature.
471473001510	HMMPfam hit to PF00573, Ribosomal protein L4/L1 family, score 3.3e-88
471473001511	HMMPfam hit to PF00297, Ribosomal protein L3, score 3.4e-55
471473001512	2 probable transmembrane helices predicted for CTL0791 by TMHMM2.0 at aa 136-158 and 272-294
471473001513	HMMPfam hit to PF02911, Formyl transferase,C-terminal domain, score 6.1e-46
471473001514	HMMPfam hit to PF00551, Formyl transferase, score 1.6e-31
471473001515	PS00101 Hexapeptide-repeat containing-transferases signature.
471473001516	HMMPfam hit to PF00132, Bacterial transferase hexapeptide (three rep, score 37
471473001517	HMMPfam hit to PF00132, Bacterial transferase hexapeptide (three rep, score 11
471473001518	HMMPfam hit to PF00132, Bacterial transferase hexapeptide (three rep, score 7.9
471473001519	HMMPfam hit to PF00132, Bacterial transferase hexapeptide (three rep, score 0.0041
471473001520	HMMPfam hit to PF00132, Bacterial transferase hexapeptide (three rep, score 4.4
471473001521	HMMPfam hit to PF00132, Bacterial transferase hexapeptide (three rep, score 0.77
471473001522	HMMPfam hit to PF00132, Bacterial transferase hexapeptide (three rep, score 53
471473001523	HMMPfam hit to PF00132, Bacterial transferase hexapeptide (three rep, score 0.12
471473001524	HMMPfam hit to PF07977, FabA-like domain, score 6.5e-59
471473001525	1 probable transmembrane helix predicted for CTL0794 by TMHMM2.0 at aa 60-82
471473001526	HMMPfam hit to PF03331, UDP-3-O-acyl N-acetylglycosamine deacetylase, score 3.3e-178
471473001527	7 probable transmembrane helices predicted for CTL0796 by TMHMM2.0 at aa 24-46, 55-74, 84-106,113-135,161-183, 190-207 and 509-531
471473001528	HMMPfam hit to PF00795, Carbon-nitrogen hydrolase,score 4e-48
471473001529	HMMPfam hit to PF03061, Thioesterase superfamily,score 3.4e-14
471473001530	HMMPfam hit to PF00929, Exonuclease, score 3.9e-54
471473001531	HMMPfam hit to PF02367, Uncharacterised P-loop hydrolase UPF0079, score 1.6e-62
471473001532	PS00017 ATP/GTP-binding site motif A (P-loop).
471473001533	HMMPfam hit to PF00085, Thioredoxin, score 1.1e-38
471473001534	PS00194 Thioredoxin family active site.
471473001535	HMMPfam hit to PF00588, SpoU rRNA Methylase family,score 8e-43
471473001536	HMMPfam hit to PF00254, FKBP-type peptidyl-prolyl cis-trans isomeras, score 3.2e-34
471473001537	PS00454 FKBP-type peptidyl-prolyl cis-trans isomerase signature 2.
471473001538	PS00453 FKBP-type peptidyl-prolyl cis-trans isomerase signature 1.
471473001539	HMMPfam hit to PF01346, Domain amino terminal to FKBP-type peptidyl-, score 1e-05
471473001540	HMMPfam hit to PF00152, tRNA synthetases class II (D, K and N), score 2.1e-199
471473001541	PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.
471473001542	HMMPfam hit to PF02938, GAD domain, score 4.2e-43
471473001543	PS00179 Aminoacyl-transfer RNA synthetases class-II signature 1.
471473001544	HMMPfam hit to PF01336, OB-fold nucleic acid binding domain, score 2.1e-21
471473001545	HMMPfam hit to PF03129, Anticodon binding domain,score 8e-08
471473001546	HMMPfam hit to PF00587, tRNA synthetase class II core domain (, score 3e-47
471473001547	10 probable transmembrane helices predicted for CTL0806 by TMHMM2.0 at aa 29-48, 68-90, 103-125,183-205,263-282, 302-321, 334-351, 361-383, 390-412 and 422-444
471473001548	HMMPfam hit to PF07690, Major Facilitator Superfamily, score 2.2e-64
471473001549	PS00942 glpT family of transporters signature.
471473001550	PS00340 Growth factor and cytokines receptors family signature 2.
471473001551	HMMPfam hit to PF02811, PHP domain, score 1.4e-65
471473001552	HMMPfam hit to PF07733, Bacterial DNA polymerase III alpha sub, score 7.7e-271
471473001553	HMMPfam hit to PF00515, Tetratricopeptide repeat,score 0.02
471473001554	HMMPfam hit to PF00515, Tetratricopeptide repeat,score 0.3
471473001555	HMMPfam hit to PF07719, Tetratricopeptide repeat,score 0.0021
471473001556	1 probable transmembrane helix predicted for CTL0810 by TMHMM2.0 at aa 5-27
471473001557	PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
471473001558	2 probable transmembrane helices predicted for CTL0813 by TMHMM2.0 at aa 5-24 and 397-419
471473001559	HMMPfam hit to PF00768, D-alanyl-D-alanine carboxypeptidase, score 9.6e-23
471473001560	HMMPfam hit to PF01189, NOL1/NOP2/sun family, score 2.8e-09
471473001561	HMMPfam hit to PF05525, Branched-chain amino acid transport p, score 5.6e-15
471473001562	10 probable transmembrane helices predicted for CTL0817 by TMHMM2.0 at aa 12-34, 44-66, 87-109,124-143,150-171, 202-221, 251-273, 302-324, 336-358 and 363-385
471473001563	HMMPfam hit to PF04434, SWIM zinc finger, score 0.00011
471473001564	HMMPfam hit to PF00176, SNF2 family N-terminal domain, score 5.6e-57
471473001565	HMMPfam hit to PF00271, Helicase conserved C-terminal domain, score 6.2e-18
471473001566	2 probable transmembrane helices predicted for CTL0819 by TMHMM2.0 at aa 99-121 and 136-153
471473001567	HMMPfam hit to PF03486, HI0933-like protein, score 0.00088
471473001568	HMMPfam hit to PF01134, Glucose inhibited division protein A, score 3.8e-18
471473001569	HMMPfam hit to PF07992, Pyridine nucleotide-disulphide oxidored, score 9.6e-77
471473001570	PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site.
471473001571	HMMPfam hit to PF00070, Pyridine nucleotide-disulphide oxidored, score 2.3e-32
471473001572	HMMPfam hit to PF02852, Pyridine nucleotide-disulphide oxidored, score 1e-48
471473001573	HMMPfam hit to PF04055, Radical SAM superfamily,score 2.2e-17
471473001574	HMMPfam hit to PF01514, Secretory protein of YscJ/FliF family, score 6.4e-32
471473001575	1 probable transmembrane helix predicted for CTL0822 by TMHMM2.0 at aa 236-258
471473001576	5 probable transmembrane helices predicted for CTL0825 by TMHMM2.0 at aa 7-29, 93-115, 135-157, 245-267 and 274-296
471473001577	PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
471473001578	HMMPfam hit to PF00813, FliP family, score 1.9e-73
471473001579	PS01061 Flagella transport protein fliP family signature 2.
471473001580	HMMPfam hit to PF01313, Bacterial export proteins,family, score 5.2e-27
471473001581	2 probable transmembrane helices predicted for CTL0826 by TMHMM2.0 at aa 20-42 and 62-84
471473001582	HMMPfam hit to PF01311, Bacterial export proteins,family, score 1e-14
471473001583	6 probable transmembrane helices predicted for CTL0827 by TMHMM2.0 at aa 26-48, 52-74, 87-109,145-167,203-225 and 240-262
471473001584	2 probable transmembrane helices predicted for CTL0828 by TMHMM2.0 at aa 50-72 and 113-135
471473001585	HMMPfam hit to PF07379, Protein of unknown function (DUF1494), score 4.2e-134
471473001586	1 probable transmembrane helix predicted for CTL0830 by TMHMM2.0 at aa 12-34
471473001587	1 probable transmembrane helix predicted for CTL0831 by TMHMM2.0 at aa 20-42
471473001588	3 probable transmembrane helices predicted for CTL0833 by TMHMM2.0 at aa 160-182, 207-229 and 364-386
471473001589	HMMPfam hit to PF00482, Bacterial type II secretion system protein F, score 7.6e-18
471473001590	HMMPfam hit to PF00482, Bacterial type II secretion system protein F, score 1.8e-21
471473001591	HMMPfam hit to PF00437, Type II/IV secretion system protein, score 4.9e-116
471473001592	PS00662 Bacterial type II secretion system protein E signature.
471473001593	PS00017 ATP/GTP-binding site motif A (P-loop).
471473001594	HMMPfam hit to PF00263, Bacterial type II and III secretion system, score 6.6e-58
471473001595	HMMPfam hit to PF03958, Bacterial type II/III secretion system sho, score 2.2e-09
471473001596	HMMPfam hit to PF03958, Bacterial type II/III secretion system sho, score 4.8e-10
471473001597	1 probable transmembrane helix predicted for CTL0835 by TMHMM2.0 at aa 5-27
471473001598	HMMPfam hit to PF00557, metallopeptidase family M24,score 4.6e-63
471473001599	HMMPfam hit to PF01119, DNA mismatch repair protein,C-termina, score 4.5e-47
471473001600	HMMPfam hit to PF02518, Histidine kinase-, DNA gyrase B-, and, score 9.9e-07
471473001601	PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature.
471473001602	HMMPfam hit to PF07720, Tetratricopeptide repeat,score 4.7e-08
471473001603	HMMPfam hit to PF07720, Tetratricopeptide repeat,score 2
471473001604	1 probable transmembrane helix predicted for CTL0841 by TMHMM2.0 at aa 256-278
471473001605	HMMPfam hit to PF00892, Integral membrane protein DUF6, score 5.8e-19
471473001606	10 probable transmembrane helices predicted for CTL0843 by TMHMM2.0 at aa 13-35, 50-72, 85-107,117-134,143-162, 172-194, 207-229, 239-261, 268-290 and 295-314
471473001607	HMMPfam hit to PF00892, Integral membrane protein DUF6, score 9.3e-25
471473001608	HMMPfam hit to PF02824, TGS domain, score 1.8e-15
471473001609	HMMPfam hit to PF07973, Threonyl and Alanyl tRNA synthetase se, score 2.3e-21
471473001610	HMMPfam hit to PF00587, tRNA synthetase class II core domain (, score 3.2e-65
471473001611	PS00179 Aminoacyl-transfer RNA synthetases class-II signature 1.
471473001612	PS00339 Aminoacyl-transfer RNA synthetases class-II signature 2.
471473001613	HMMPfam hit to PF03129, Anticodon binding domain,score 9.3e-29
471473001614	HMMPfam hit to PF01656, CobQ/CobB/MinD/ParA nucleotide binding domai, score 5.7e-37
471473001615	HMMPfam hit to PF03677, Uncharacterised protein family (UPF0137), score 1.2e-155
471473001616	HMMPfam hit to PF00579, tRNA synthetases class I (W and Y), score 2.1e-109
471473001617	HMMPfam hit to PF04851, Type III restriction enzyme,res subunit, score 9.1e-06
471473001618	PS00017 ATP/GTP-binding site motif A (P-loop).
471473001619	HMMPfam hit to PF00271, Helicase conserved C-terminal domain, score 2e-19
471473001620	HMMPfam hit to PF02151, UvrB/uvrC motif, score 1.9e-06
471473001621	HMMPfam hit to PF03952, Enolase, N-terminal domain,score 2e-56
471473001622	HMMPfam hit to PF00113, Enolase, C-terminal TIM barrel domain, score 8.2e-146
471473001623	PS00164 Enolase signature.
471473001624	2 probable transmembrane helices predicted for CTL0851 by TMHMM2.0 at aa 20-42 and 316-335
471473001625	HMMPfam hit to PF00672, HAMP domain, score 4.2e-09
471473001626	HMMPfam hit to PF07228, Stage II sporulation protein E (SpoIIE), score 9e-61
471473001627	1 probable transmembrane helix predicted for CTL0852 by TMHMM2.0 at aa 9-31
471473001628	HMMPfam hit to PF00037, 4Fe-4S binding domain,score 0.0064
471473001629	PS00198 4Fe-4S ferredoxins, iron-sulfur binding region signature.
471473001630	HMMPfam hit to PF02910, Fumarate reductase/succinate dehydroge, score 2.4e-47
471473001631	HMMPfam hit to PF00890, FAD binding domain, score 3.8e-85
471473001632	PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site.
471473001633	this CDS carries multiple frameshfift mutations. The sequence has been checked and is believed to be correct.succinate dehydrogenase, membrane component (pseudogene)
471473001634	5 probable transmembrane helices predicted for CTL0856 by TMHMM2.0 at aa 19-41, 65-87, 115-137, 220-242 and 262-284
471473001635	HMMPfam hit to PF04909, Amidohydrolase, score 0.0016
471473001636	HMMPfam hit to PF01026, TatD related DNase, score 6.6e-106
471473001637	PS01091 Uncharacterized protein family UPF0006 signature 3.
471473001638	PS01090 Uncharacterized protein family UPF0006 signature 2.
471473001639	PS00194 Thioredoxin family active site.
471473001640	8 probable transmembrane helices predicted for CTL0859 by TMHMM2.0 at aa 287-309, 330-352,367-389,416-438, 453-472, 493-510, 514-536 and 549-571
471473001641	HMMPfam hit to PF02683, Cytochrome C biogenesis protein transmembran, score 5.2e-05
471473001642	3 probable transmembrane helices predicted for CTL0860 by TMHMM2.0 at aa 22-39, 141-163 and 178-200
471473001643	HMMPfam hit to PF01618, MotA/TolQ/ExbB proton channel family, score 2e-51
471473001644	HMMPfam hit to PF02472, Biopolymer transport protein ExbD/TolR, score 0.00021
471473001645	1 probable transmembrane helix predicted for CTL0861 by TMHMM2.0 at aa 15-37
471473001646	1 probable transmembrane helix predicted for CTL0861A by TMHMM2.0 at aa 7-29
471473001647	HMMPfam hit to PF04052, TolB amino-terminal domain,score 1.5e-54
471473001648	HMMPfam hit to PF07676, WD40-like Beta Propeller Repeat, score 9.7e-05
471473001649	HMMPfam hit to PF07676, WD40-like Beta Propeller Repeat, score 2.4e-08
471473001650	HMMPfam hit to PF07676, WD40-like Beta Propeller Repeat, score 2.6e-05
471473001651	HMMPfam hit to PF07676, WD40-like Beta Propeller Repeat, score 0.28
471473001652	PS00013 Prokaryotic membrane lipoprotein lipid attachment site.
471473001653	HMMPfam hit to PF00691, OmpA family, score 2.7e-26
471473001654	HMMPfam hit to PF01476, LysM domain, score 6.1e-17
471473001655	HMMPfam hit to PF00578, AhpC/TSA family, score 2.3e-87
471473001656	HMMPfam hit to PF08534, Redoxin, score 3.5e-10
471473001657	HMMPfam hit to PF00118, TCP-1/cpn60 chaperonin family, score 7.9e-131
471473001658	HMMPfam hit to PF07075, Protein of unknown function (DUF1343), score 2.4e-231
471473001659	1 probable transmembrane helix predicted for CTL0868 by TMHMM2.0 at aa 7-26
471473001660	HMMPfam hit to PF01725, Ham1 family, score 3.9e-43
471473001661	HMMPfam hit to PF03167, Uracil DNA glycosylase superfamily, score 8e-76
471473001662	PS00130 Uracil-DNA glycosylase signature.
471473001663	HMMPfam hit to PF00580, UvrD/REP helicase, score 6.3e-222
471473001664	PS00017 ATP/GTP-binding site motif A (P-loop).
471473001665	HMMPfam hit to PF00309, Sigma-54 factor, Activator interacting do, score 1e-17
471473001666	HMMPfam hit to PF04963, Sigma-54 factor, core binding domain, score 4.9e-08
471473001667	HMMPfam hit to PF04552, Sigma-54, DNA binding domain, score 3.9e-77
471473001668	PS00718 Sigma-54 factors family signature 2.
471473001669	HMMPfam hit to PF03070, TENA/THI-4/PQQC family,score 5.9e-76
471473001670	PS00017 ATP/GTP-binding site motif A (P-loop).
471473001671	PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature.
471473001672	HMMPfam hit to PF02152, Dihydroneopterin aldolase,score 4e-47
471473001673	HMMPfam hit to PF04545, Sigma-70, region, score 1.1e-23
471473001674	PS00716 Sigma-70 factors family signature 2.
471473001675	HMMPfam hit to PF04539, Sigma-70 region, score 4.2e-36
471473001676	HMMPfam hit to PF04542, Sigma-70 region, score 2.4e-28
471473001677	PS00715 Sigma-70 factors family signature 1.
471473001678	PS00030 Eukaryotic putative RNA-binding region RNP-1 signature.
471473001679	HMMPfam hit to PF00140, Sigma-70 factor,region,score 2.2e-18
471473001680	HMMPfam hit to PF03979, Sigma-70 factor,region,score 3.8e-24
471473001681	HMMPfam hit to PF06785, Uncharacterised protein family (UPF0242), score 0
471473001682	2 probable transmembrane helices predicted for CTL0880 by TMHMM2.0 at aa 34-56 and 61-83
471473001683	HMMPfam hit to PF01649, Ribosomal protein S20,score 1.3e-15
471473001684	2 probable transmembrane helices predicted for CTL0882 by TMHMM2.0 at aa 213-235 and 240-262
471473001685	HMMPfam hit to PF04518, Protein of unknown function,DUF582, score 1.5e-179
471473001686	HMMPfam hit to PF04518, Protein of unknown function,DUF582, score 1.2e-207
471473001687	HMMPfam hit to PF04518, Protein of unknown function,DUF582, score 5e-209
471473001688	PS00962 Ribosomal protein S2 signature 1.
471473001689	13 probable transmembrane helices predicted for CTL0888 by TMHMM2.0 at aa 20-42, 86-108, 118-140,147-166,176-198, 221-243, 258-280, 300-322, 342-364,371-393,398-420, 441-463 and 478-500
471473001690	HMMPfam hit to PF03023, MviN-like protein, score 1.3e-187
471473001691	HMMPfam hit to PF01261, Xylose isomerase-like TIM barrel, score 8.2e-51
471473001692	PS00730 AP endonucleases family 2 signature 2.
471473001693	HMMPfam hit to PF01479, S4 domain, score 2.2e-20
471473001694	HMMPfam hit to PF00163, Ribosomal protein S4/S9 N-terminal domai, score 1.2e-16
471473001695	HMMPfam hit to PF00581, Rhodanese-like domain,score 1.6e-11
471473001696	HMMPfam hit to PF00348, Polyprenyl synthetase,score 3.2e-29
471473001697	PS00444 Polyprenyl synthetases signature 2.
471473001698	PS00723 Polyprenyl synthetases signature 1.
471473001699	HMMPfam hit to PF00132, Bacterial transferase hexapeptide (three rep, score 1.2
471473001700	HMMPfam hit to PF00132, Bacterial transferase hexapeptide (three rep, score 58
471473001701	HMMPfam hit to PF00132, Bacterial transferase hexapeptide (three rep, score 4.2
471473001702	HMMPfam hit to PF00132, Bacterial transferase hexapeptide (three rep, score 3
471473001703	HMMPfam hit to PF00486, Transcriptional regulatory protein, C ter, score 2.6e-20